Query 003703
Match_columns 801
No_of_seqs 578 out of 3190
Neff 7.7
Searched_HMMs 46136
Date Fri Mar 29 04:25:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003703.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003703hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1187 Serine/threonine prote 100.0 3.4E-53 7.3E-58 466.9 25.2 274 441-723 61-352 (361)
2 KOG0192 Tyrosine kinase specif 100.0 9.7E-46 2.1E-50 405.3 23.0 247 461-725 47-305 (362)
3 KOG0581 Mitogen-activated prot 100.0 1.5E-44 3.3E-49 378.6 17.9 250 445-721 76-338 (364)
4 KOG0605 NDR and related serine 100.0 4.4E-43 9.5E-48 381.0 27.1 245 455-711 141-435 (550)
5 KOG0575 Polo-like serine/threo 100.0 7.1E-44 1.5E-48 393.0 20.3 246 455-721 18-272 (592)
6 KOG0615 Serine/threonine prote 100.0 3.5E-44 7.6E-49 377.7 13.6 246 453-716 170-435 (475)
7 KOG0591 NIMA (never in mitosis 100.0 3.8E-44 8.2E-49 360.4 12.5 254 456-722 20-285 (375)
8 KOG0598 Ribosomal protein S6 k 100.0 2.1E-43 4.5E-48 370.1 16.7 237 455-711 25-270 (357)
9 KOG0595 Serine/threonine-prote 100.0 4.5E-43 9.7E-48 370.2 19.3 247 455-720 10-270 (429)
10 KOG0197 Tyrosine kinases [Sign 100.0 5.5E-43 1.2E-47 382.7 16.3 248 459-725 210-463 (468)
11 KOG0616 cAMP-dependent protein 100.0 4E-41 8.7E-46 341.4 16.7 230 456-709 45-283 (355)
12 KOG0592 3-phosphoinositide-dep 100.0 2.5E-41 5.4E-46 366.8 15.2 247 455-714 73-334 (604)
13 KOG0198 MEKK and related serin 100.0 1.9E-40 4.2E-45 353.4 17.4 255 455-722 17-280 (313)
14 PHA02988 hypothetical protein; 100.0 2.3E-39 5E-44 347.9 23.8 254 443-724 13-280 (283)
15 cd05102 PTKc_VEGFR3 Catalytic 100.0 7.6E-40 1.6E-44 360.2 19.1 255 454-724 6-335 (338)
16 KOG0578 p21-activated serine/t 100.0 8.5E-40 1.8E-44 358.1 16.9 245 457-721 275-526 (550)
17 KOG0593 Predicted protein kina 100.0 5.8E-40 1.2E-44 333.3 14.2 248 456-716 3-282 (396)
18 KOG0193 Serine/threonine prote 100.0 1.2E-39 2.6E-44 357.5 17.0 261 448-723 385-653 (678)
19 KOG0597 Serine-threonine prote 100.0 1.9E-39 4.1E-44 351.5 18.2 247 455-721 2-254 (808)
20 KOG0694 Serine/threonine prote 100.0 4E-39 8.6E-44 359.0 18.4 238 453-712 366-613 (694)
21 KOG0583 Serine/threonine prote 100.0 1E-38 2.2E-43 352.7 20.6 243 452-716 14-273 (370)
22 KOG4721 Serine/threonine prote 100.0 3.7E-40 7.9E-45 356.4 8.8 234 460-718 129-364 (904)
23 KOG0582 Ste20-like serine/thre 100.0 1.8E-38 3.8E-43 337.5 20.9 261 454-720 25-295 (516)
24 KOG1026 Nerve growth factor re 100.0 2.7E-39 5.8E-44 369.4 13.7 253 456-725 487-764 (774)
25 cd05631 STKc_GRK4 Catalytic do 100.0 1.6E-38 3.6E-43 341.3 18.6 242 456-713 1-251 (285)
26 cd05096 PTKc_DDR1 Catalytic do 100.0 3.8E-38 8.1E-43 341.4 21.1 258 455-721 5-303 (304)
27 KOG0588 Serine/threonine prote 100.0 1.4E-38 3E-43 351.7 16.3 242 457-721 14-266 (786)
28 cd05612 STKc_PRKX_like Catalyt 100.0 5E-38 1.1E-42 338.7 19.0 232 456-711 2-242 (291)
29 PTZ00263 protein kinase A cata 100.0 4.9E-38 1.1E-42 345.0 18.0 234 455-712 18-260 (329)
30 KOG0600 Cdc2-related protein k 100.0 3.1E-38 6.7E-43 340.3 15.9 252 455-718 117-400 (560)
31 cd05104 PTKc_Kit Catalytic dom 100.0 1.5E-37 3.3E-42 347.4 21.6 253 454-722 34-373 (375)
32 cd05571 STKc_PKB Catalytic dom 100.0 6E-38 1.3E-42 343.3 17.9 229 462-711 2-239 (323)
33 KOG0661 MAPK related serine/th 100.0 1.3E-38 2.9E-43 340.8 11.4 254 454-720 9-293 (538)
34 cd05585 STKc_YPK1_like Catalyt 100.0 1.1E-37 2.3E-42 339.6 18.8 230 463-713 1-239 (312)
35 KOG0201 Serine/threonine prote 100.0 2E-38 4.3E-43 337.3 12.2 247 456-720 14-265 (467)
36 cd06649 PKc_MEK2 Catalytic dom 100.0 3.3E-37 7.1E-42 338.7 22.3 252 455-719 5-302 (331)
37 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 1.1E-37 2.5E-42 342.4 18.5 246 455-717 1-256 (333)
38 cd05108 PTKc_EGFR Catalytic do 100.0 3.6E-37 7.7E-42 335.9 21.8 252 455-724 7-269 (316)
39 cd05064 PTKc_EphR_A10 Catalyti 100.0 3.5E-37 7.6E-42 327.3 21.2 249 455-722 5-264 (266)
40 KOG0580 Serine/threonine prote 100.0 4.5E-38 9.7E-43 311.0 12.8 242 455-717 22-272 (281)
41 cd05106 PTKc_CSF-1R Catalytic 100.0 1.9E-37 4E-42 346.5 19.5 254 454-723 37-372 (374)
42 PTZ00267 NIMA-related protein 100.0 2.2E-37 4.9E-42 356.7 20.5 248 456-718 68-323 (478)
43 cd05595 STKc_PKB_beta Catalyti 100.0 1E-37 2.2E-42 341.6 16.7 229 462-711 2-239 (323)
44 cd05048 PTKc_Ror Catalytic Dom 100.0 5.7E-37 1.2E-41 327.9 21.3 251 456-722 6-282 (283)
45 cd05593 STKc_PKB_gamma Catalyt 100.0 1.7E-37 3.6E-42 340.7 17.4 229 462-711 2-239 (328)
46 cd07848 STKc_CDKL5 Catalytic d 100.0 3.3E-37 7.2E-42 330.7 19.1 250 455-715 1-281 (287)
47 KOG1095 Protein tyrosine kinas 100.0 1.9E-37 4.1E-42 366.0 17.3 250 457-724 694-962 (1025)
48 PTZ00426 cAMP-dependent protei 100.0 2.8E-37 6E-42 340.7 17.6 233 455-711 30-272 (340)
49 cd05105 PTKc_PDGFR_alpha Catal 100.0 9E-37 1.9E-41 343.3 21.8 255 453-723 35-397 (400)
50 cd07862 STKc_CDK6 Catalytic do 100.0 7.8E-37 1.7E-41 328.3 20.1 249 456-716 2-285 (290)
51 cd07859 STKc_TDY_MAPK_plant Ca 100.0 8.1E-37 1.8E-41 335.5 20.7 252 456-718 1-290 (338)
52 cd05072 PTKc_Lyn Catalytic dom 100.0 1.3E-36 2.8E-41 321.3 21.2 249 455-722 6-260 (261)
53 KOG0194 Protein tyrosine kinas 100.0 2E-37 4.4E-42 344.2 15.8 252 456-728 158-425 (474)
54 cd05592 STKc_nPKC_theta_delta 100.0 7.5E-37 1.6E-41 333.7 20.0 234 462-716 2-245 (316)
55 PTZ00283 serine/threonine prot 100.0 1.1E-36 2.3E-41 351.8 22.3 256 448-718 25-297 (496)
56 KOG0659 Cdk activating kinase 100.0 4.5E-37 9.7E-42 307.9 16.5 249 456-716 3-279 (318)
57 cd05062 PTKc_IGF-1R Catalytic 100.0 1.2E-36 2.7E-41 324.7 21.2 253 453-721 4-276 (277)
58 KOG0611 Predicted serine/threo 100.0 3.7E-37 8E-42 321.9 16.5 238 454-714 52-299 (668)
59 cd05114 PTKc_Tec_Rlk Catalytic 100.0 1.4E-36 3E-41 320.3 21.2 246 455-720 4-255 (256)
60 cd05068 PTKc_Frk_like Catalyti 100.0 2.4E-36 5.3E-41 319.4 23.1 250 454-722 5-260 (261)
61 PF07714 Pkinase_Tyr: Protein 100.0 3.5E-37 7.7E-42 326.4 16.7 244 460-720 4-259 (259)
62 cd05616 STKc_cPKC_beta Catalyt 100.0 8.5E-37 1.8E-41 334.2 20.0 237 456-713 1-247 (323)
63 KOG0585 Ca2+/calmodulin-depend 100.0 7.1E-37 1.5E-41 327.0 18.6 254 453-719 95-373 (576)
64 cd05111 PTK_HER3 Pseudokinase 100.0 3.4E-36 7.4E-41 322.1 24.0 251 456-724 8-269 (279)
65 cd05589 STKc_PKN Catalytic dom 100.0 7.7E-37 1.7E-41 334.7 19.2 237 457-715 1-249 (324)
66 cd05094 PTKc_TrkC Catalytic do 100.0 2.3E-36 5E-41 325.3 22.6 254 456-725 6-284 (291)
67 cd06650 PKc_MEK1 Catalytic dom 100.0 1E-36 2.2E-41 335.2 20.1 255 454-721 4-302 (333)
68 cd05587 STKc_cPKC Catalytic do 100.0 8.8E-37 1.9E-41 334.2 19.5 237 456-713 1-247 (324)
69 cd05116 PTKc_Syk Catalytic dom 100.0 2.5E-36 5.5E-41 318.7 22.3 243 462-722 2-254 (257)
70 cd07869 STKc_PFTAIRE1 Catalyti 100.0 1.6E-36 3.4E-41 328.7 21.2 251 454-716 4-286 (303)
71 cd05584 STKc_p70S6K Catalytic 100.0 1E-36 2.2E-41 333.7 19.8 230 461-711 2-244 (323)
72 cd05605 STKc_GRK4_like Catalyt 100.0 9.7E-37 2.1E-41 327.5 19.3 242 456-713 1-251 (285)
73 cd05052 PTKc_Abl Catalytic dom 100.0 2.2E-36 4.8E-41 320.3 21.7 249 456-723 7-262 (263)
74 cd05608 STKc_GRK1 Catalytic do 100.0 6.3E-37 1.4E-41 328.2 17.7 238 463-714 1-248 (280)
75 cd05093 PTKc_TrkB Catalytic do 100.0 2.5E-36 5.4E-41 324.6 22.3 254 455-724 5-280 (288)
76 cd05599 STKc_NDR_like Catalyti 100.0 5.6E-37 1.2E-41 341.0 17.9 245 455-711 1-286 (364)
77 cd07871 STKc_PCTAIRE3 Catalyti 100.0 1.5E-36 3.3E-41 326.5 20.2 250 455-716 5-283 (288)
78 cd05054 PTKc_VEGFR Catalytic d 100.0 1.5E-36 3.4E-41 334.3 20.6 253 455-723 7-333 (337)
79 cd05148 PTKc_Srm_Brk Catalytic 100.0 4.7E-37 1E-41 324.4 15.7 250 454-722 5-260 (261)
80 cd05594 STKc_PKB_alpha Catalyt 100.0 2.4E-37 5.2E-42 338.8 13.9 228 462-710 2-239 (325)
81 cd05573 STKc_ROCK_NDR_like Cat 100.0 6.4E-37 1.4E-41 338.3 17.0 250 455-716 1-283 (350)
82 cd05033 PTKc_EphR Catalytic do 100.0 4E-36 8.6E-41 318.7 22.1 251 455-723 4-265 (266)
83 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 3.2E-36 6.8E-41 322.6 21.4 260 455-723 4-283 (284)
84 cd05590 STKc_nPKC_eta Catalyti 100.0 1.6E-36 3.4E-41 331.8 19.3 231 462-713 2-242 (320)
85 cd05049 PTKc_Trk Catalytic dom 100.0 2.8E-36 6E-41 321.9 20.8 251 455-721 5-279 (280)
86 PLN00034 mitogen-activated pro 100.0 5.8E-37 1.2E-41 339.8 16.0 240 457-717 76-327 (353)
87 cd05109 PTKc_HER2 Catalytic do 100.0 5.9E-36 1.3E-40 319.9 23.2 252 455-724 7-269 (279)
88 cd05619 STKc_nPKC_theta Cataly 100.0 2.3E-36 4.9E-41 330.0 20.3 234 462-716 2-245 (316)
89 cd05090 PTKc_Ror1 Catalytic do 100.0 4E-36 8.8E-41 321.8 21.8 250 456-721 6-281 (283)
90 cd05618 STKc_aPKC_iota Catalyt 100.0 1.5E-36 3.2E-41 333.4 18.7 230 462-712 2-250 (329)
91 cd05075 PTKc_Axl Catalytic dom 100.0 5.4E-36 1.2E-40 318.3 22.5 249 458-722 2-270 (272)
92 cd05607 STKc_GRK7 Catalytic do 100.0 4.7E-36 1E-40 320.9 22.2 242 463-719 1-251 (277)
93 cd05615 STKc_cPKC_alpha Cataly 100.0 2E-36 4.4E-41 331.4 19.7 238 456-714 1-248 (323)
94 cd05035 PTKc_Axl_like Catalyti 100.0 4.5E-36 9.7E-41 318.6 21.7 251 457-723 1-272 (273)
95 KOG1989 ARK protein kinase fam 100.0 9.2E-37 2E-41 350.4 17.6 260 451-721 33-310 (738)
96 cd05588 STKc_aPKC Catalytic do 100.0 6.2E-37 1.3E-41 336.3 15.6 230 462-712 2-250 (329)
97 cd05626 STKc_LATS2 Catalytic d 100.0 1.3E-36 2.8E-41 340.6 18.5 255 456-719 2-306 (381)
98 PRK13184 pknD serine/threonine 100.0 4.7E-36 1E-40 356.9 24.1 264 455-725 2-292 (932)
99 cd05082 PTKc_Csk Catalytic dom 100.0 5.3E-36 1.1E-40 315.9 22.0 244 455-722 6-255 (256)
100 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 6.4E-36 1.4E-40 316.0 22.5 249 455-722 6-259 (260)
101 cd05575 STKc_SGK Catalytic dom 100.0 1.8E-36 3.8E-41 331.7 18.8 239 462-721 2-250 (323)
102 cd05620 STKc_nPKC_delta Cataly 100.0 1.3E-36 2.9E-41 331.7 17.7 234 462-716 2-245 (316)
103 cd05582 STKc_RSK_N N-terminal 100.0 4.5E-37 9.7E-42 335.6 14.0 238 461-719 2-250 (318)
104 cd05084 PTKc_Fes Catalytic dom 100.0 5.1E-36 1.1E-40 315.0 21.3 242 462-721 2-251 (252)
105 cd05115 PTKc_Zap-70 Catalytic 100.0 6.1E-36 1.3E-40 316.3 21.9 245 462-723 2-255 (257)
106 cd05591 STKc_nPKC_epsilon Cata 100.0 2.1E-36 4.5E-41 330.8 18.8 230 462-712 2-241 (321)
107 cd05628 STKc_NDR1 Catalytic do 100.0 3.7E-36 8.1E-41 334.6 21.0 251 455-716 1-291 (363)
108 KOG0589 Serine/threonine prote 100.0 4.3E-37 9.3E-42 335.6 13.0 248 455-720 4-260 (426)
109 cd06637 STKc_TNIK Catalytic do 100.0 3.3E-36 7.1E-41 319.9 19.4 249 452-716 3-267 (272)
110 cd05113 PTKc_Btk_Bmx Catalytic 100.0 5.3E-36 1.2E-40 316.4 20.8 245 456-720 5-255 (256)
111 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 4.6E-36 9.9E-41 321.4 20.6 255 458-723 7-281 (283)
112 cd05045 PTKc_RET Catalytic dom 100.0 7.2E-36 1.6E-40 321.2 22.1 253 456-724 1-287 (290)
113 cd05601 STKc_CRIK Catalytic do 100.0 7.9E-37 1.7E-41 335.3 14.9 246 455-716 1-261 (330)
114 cd06624 STKc_ASK Catalytic dom 100.0 5.3E-36 1.2E-40 318.1 20.6 252 449-716 2-263 (268)
115 cd05071 PTKc_Src Catalytic dom 100.0 1.1E-35 2.4E-40 315.1 22.9 250 455-723 6-260 (262)
116 cd05059 PTKc_Tec_like Catalyti 100.0 7.4E-36 1.6E-40 315.0 21.5 244 456-719 5-254 (256)
117 cd05060 PTKc_Syk_like Catalyti 100.0 9.6E-36 2.1E-40 314.1 22.2 244 462-723 2-255 (257)
118 cd08529 STKc_FA2-like Catalyti 100.0 4.6E-36 1E-40 315.4 19.6 243 456-716 1-251 (256)
119 cd05617 STKc_aPKC_zeta Catalyt 100.0 1E-36 2.2E-41 334.4 15.2 231 462-713 2-249 (327)
120 cd05051 PTKc_DDR Catalytic dom 100.0 9.3E-36 2E-40 320.7 22.4 257 455-721 5-295 (296)
121 cd05570 STKc_PKC Catalytic dom 100.0 4.3E-36 9.3E-41 328.0 20.1 230 462-712 2-241 (318)
122 cd05067 PTKc_Lck_Blk Catalytic 100.0 9.7E-36 2.1E-40 314.6 22.1 250 454-722 5-259 (260)
123 cd05614 STKc_MSK2_N N-terminal 100.0 3.4E-36 7.3E-41 330.5 19.2 238 456-713 1-257 (332)
124 cd06646 STKc_MAP4K5 Catalytic 100.0 5.6E-36 1.2E-40 317.5 20.2 247 455-715 9-262 (267)
125 PHA03212 serine/threonine kina 100.0 5.1E-36 1.1E-40 336.6 20.9 244 455-716 92-374 (391)
126 cd05598 STKc_LATS Catalytic do 100.0 1.2E-36 2.6E-41 340.0 15.7 248 456-715 2-298 (376)
127 cd05632 STKc_GRK5 Catalytic do 100.0 6.1E-36 1.3E-40 321.4 20.5 242 457-714 2-252 (285)
128 cd05091 PTKc_Ror2 Catalytic do 100.0 2.8E-36 6E-41 322.8 17.8 249 457-721 7-281 (283)
129 cd05625 STKc_LATS1 Catalytic d 100.0 2.1E-36 4.6E-41 338.9 17.5 245 456-711 2-295 (382)
130 cd05604 STKc_SGK3 Catalytic do 100.0 2E-36 4.4E-41 331.5 17.0 239 462-721 2-250 (325)
131 cd05092 PTKc_TrkA Catalytic do 100.0 7.7E-36 1.7E-40 319.4 21.1 251 455-721 5-279 (280)
132 cd05603 STKc_SGK2 Catalytic do 100.0 3.1E-36 6.6E-41 329.4 18.1 238 462-720 2-249 (321)
133 PTZ00036 glycogen synthase kin 100.0 2E-36 4.4E-41 345.0 17.4 253 453-720 64-353 (440)
134 cd08228 STKc_Nek6 Catalytic do 100.0 1.5E-35 3.3E-40 313.9 22.8 253 455-724 2-266 (267)
135 cd05039 PTKc_Csk_like Catalyti 100.0 1.4E-35 3E-40 312.4 22.3 245 455-722 6-255 (256)
136 cd05069 PTKc_Yes Catalytic dom 100.0 1.8E-35 4E-40 312.7 23.2 249 455-722 6-259 (260)
137 cd05097 PTKc_DDR_like Catalyti 100.0 7.2E-36 1.6E-40 322.2 20.4 259 455-721 5-294 (295)
138 cd05629 STKc_NDR_like_fungal C 100.0 2.7E-36 5.8E-41 337.5 17.6 250 455-716 1-303 (377)
139 cd05063 PTKc_EphR_A2 Catalytic 100.0 1.4E-35 3.1E-40 314.6 22.2 253 454-723 4-267 (268)
140 cd05032 PTKc_InsR_like Catalyt 100.0 1.5E-35 3.4E-40 315.6 22.3 252 454-721 5-276 (277)
141 cd05053 PTKc_FGFR Catalytic do 100.0 7.7E-36 1.7E-40 321.1 20.1 256 452-723 9-291 (293)
142 cd07876 STKc_JNK2 Catalytic do 100.0 1.2E-35 2.5E-40 330.0 22.1 252 453-720 19-317 (359)
143 KOG0610 Putative serine/threon 100.0 4.3E-36 9.3E-41 317.2 17.3 246 457-713 79-383 (459)
144 cd06628 STKc_MAPKKK_Byr2_like 100.0 2E-35 4.4E-40 313.0 22.6 246 457-714 2-260 (267)
145 cd05056 PTKc_FAK Catalytic dom 100.0 1.9E-35 4E-40 314.3 22.4 252 455-725 6-267 (270)
146 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 2.6E-35 5.5E-40 311.7 23.3 251 455-723 2-265 (267)
147 cd05098 PTKc_FGFR1 Catalytic d 100.0 1.4E-35 2.9E-40 322.0 21.4 255 455-725 18-301 (307)
148 cd05036 PTKc_ALK_LTK Catalytic 100.0 1.3E-35 2.9E-40 317.0 21.0 252 453-720 4-275 (277)
149 cd05602 STKc_SGK1 Catalytic do 100.0 5.1E-36 1.1E-40 328.3 18.2 239 462-721 2-250 (325)
150 KOG0658 Glycogen synthase kina 100.0 2.4E-36 5.1E-41 316.3 14.8 252 454-720 23-308 (364)
151 cd05107 PTKc_PDGFR_beta Cataly 100.0 1.3E-35 2.8E-40 333.9 21.9 256 452-723 34-399 (401)
152 cd05089 PTKc_Tie1 Catalytic do 100.0 1.7E-35 3.8E-40 319.6 22.1 253 455-726 2-278 (297)
153 cd05043 PTK_Ryk Pseudokinase d 100.0 1.5E-35 3.2E-40 316.7 21.2 255 454-724 5-277 (280)
154 cd05110 PTKc_HER4 Catalytic do 100.0 2E-35 4.3E-40 320.2 22.5 252 455-724 7-269 (303)
155 cd05101 PTKc_FGFR2 Catalytic d 100.0 1.8E-35 3.9E-40 320.4 22.0 256 454-725 14-298 (304)
156 cd06625 STKc_MEKK3_like Cataly 100.0 2.5E-35 5.5E-40 311.3 22.6 248 455-716 2-258 (263)
157 cd05596 STKc_ROCK Catalytic do 100.0 3.6E-36 7.8E-41 335.6 16.9 245 453-716 41-302 (370)
158 cd06631 STKc_YSK4 Catalytic do 100.0 2.6E-35 5.6E-40 312.0 22.6 251 456-716 1-260 (265)
159 KOG2345 Serine/threonine prote 100.0 1.9E-36 4.2E-41 300.6 12.9 264 452-722 18-299 (302)
160 PTZ00266 NIMA-related protein 100.0 6.7E-36 1.5E-40 356.8 19.9 255 452-719 10-296 (1021)
161 cd05061 PTKc_InsR Catalytic do 100.0 1.3E-35 2.9E-40 318.9 20.3 255 453-723 4-278 (288)
162 cd05085 PTKc_Fer Catalytic dom 100.0 2.7E-35 5.8E-40 308.9 22.0 240 462-720 2-248 (250)
163 cd07853 STKc_NLK Catalytic dom 100.0 1.1E-35 2.4E-40 331.8 20.2 252 456-719 1-289 (372)
164 cd06638 STKc_myosinIIIA Cataly 100.0 2E-35 4.3E-40 316.5 21.2 258 445-716 8-281 (286)
165 cd06643 STKc_SLK Catalytic dom 100.0 2E-35 4.4E-40 316.2 21.3 243 457-716 7-260 (282)
166 cd08229 STKc_Nek7 Catalytic do 100.0 2.2E-35 4.9E-40 312.6 21.2 254 456-723 3-265 (267)
167 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 2.5E-35 5.3E-40 312.7 21.5 233 462-719 2-260 (262)
168 cd05630 STKc_GRK6 Catalytic do 100.0 8E-36 1.7E-40 320.5 18.0 240 457-712 2-250 (285)
169 cd06654 STKc_PAK1 Catalytic do 100.0 2.7E-35 5.9E-40 318.2 22.2 248 455-719 20-271 (296)
170 KOG0663 Protein kinase PITSLRE 100.0 4.6E-36 1E-40 308.7 15.2 250 456-717 77-360 (419)
171 cd00192 PTKc Catalytic domain 100.0 2.7E-35 5.8E-40 309.5 21.4 243 462-720 2-261 (262)
172 cd07863 STKc_CDK4 Catalytic do 100.0 2.1E-35 4.5E-40 316.7 20.9 249 456-716 1-283 (288)
173 cd05050 PTKc_Musk Catalytic do 100.0 2.4E-35 5.2E-40 316.6 21.4 252 454-721 4-287 (288)
174 KOG4278 Protein tyrosine kinas 100.0 3E-36 6.5E-41 328.0 14.3 257 448-723 260-523 (1157)
175 cd05066 PTKc_EphR_A Catalytic 100.0 2.6E-35 5.7E-40 312.8 21.3 251 455-722 4-265 (267)
176 cd07872 STKc_PCTAIRE2 Catalyti 100.0 1.6E-35 3.4E-40 321.8 20.0 253 455-719 6-287 (309)
177 cd05040 PTKc_Ack_like Catalyti 100.0 2.3E-35 5E-40 310.7 20.7 244 462-720 2-255 (257)
178 cd05103 PTKc_VEGFR2 Catalytic 100.0 2.1E-35 4.5E-40 326.1 21.2 254 455-724 7-340 (343)
179 KOG0599 Phosphorylase kinase g 100.0 3.3E-36 7.1E-41 301.5 13.1 250 453-720 15-285 (411)
180 cd05621 STKc_ROCK2 Catalytic d 100.0 8.8E-36 1.9E-40 332.5 18.1 245 453-716 41-302 (370)
181 cd05088 PTKc_Tie2 Catalytic do 100.0 1.8E-35 4E-40 320.6 20.1 251 455-724 7-281 (303)
182 cd05058 PTKc_Met_Ron Catalytic 100.0 4E-35 8.6E-40 309.9 22.1 246 462-723 2-259 (262)
183 PTZ00284 protein kinase; Provi 100.0 9.1E-36 2E-40 342.6 18.6 254 449-719 123-439 (467)
184 cd05055 PTKc_PDGFR Catalytic d 100.0 3.1E-35 6.7E-40 318.8 21.7 252 454-722 34-300 (302)
185 cd06619 PKc_MKK5 Catalytic dom 100.0 1.7E-35 3.8E-40 316.6 19.3 243 456-716 2-251 (279)
186 cd06644 STKc_STK10_LOK Catalyt 100.0 5.2E-35 1.1E-39 314.8 23.1 245 455-716 12-267 (292)
187 cd06655 STKc_PAK2 Catalytic do 100.0 5E-35 1.1E-39 316.2 23.0 249 455-722 19-273 (296)
188 cd05083 PTKc_Chk Catalytic dom 100.0 2.6E-35 5.6E-40 310.2 20.2 243 455-721 6-252 (254)
189 cd07874 STKc_JNK3 Catalytic do 100.0 1.7E-35 3.7E-40 328.1 19.7 250 453-718 15-311 (355)
190 cd07861 STKc_CDK1_euk Catalyti 100.0 3.1E-35 6.6E-40 314.7 21.0 249 456-714 1-278 (285)
191 KOG0032 Ca2+/calmodulin-depend 100.0 2.2E-35 4.8E-40 326.1 20.4 246 453-717 33-292 (382)
192 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 2.8E-35 6.1E-40 315.6 20.6 252 455-723 4-283 (284)
193 cd05095 PTKc_DDR2 Catalytic do 100.0 3E-35 6.5E-40 317.4 21.0 259 455-721 5-295 (296)
194 cd06612 STKc_MST1_2 Catalytic 100.0 3.3E-35 7.1E-40 308.9 20.7 245 455-716 3-251 (256)
195 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 4.7E-35 1E-39 311.2 22.1 247 462-720 2-267 (269)
196 cd05627 STKc_NDR2 Catalytic do 100.0 1E-35 2.3E-40 330.6 17.6 246 455-712 1-284 (360)
197 cd05065 PTKc_EphR_B Catalytic 100.0 3.4E-35 7.3E-40 312.1 20.6 252 456-722 5-267 (269)
198 KOG0986 G protein-coupled rece 100.0 2.8E-36 6.2E-41 320.2 12.2 245 455-713 185-436 (591)
199 KOG4279 Serine/threonine prote 100.0 5.7E-36 1.2E-40 329.4 15.0 246 462-723 582-837 (1226)
200 KOG0577 Serine/threonine prote 100.0 3.3E-36 7.2E-41 326.9 12.8 242 456-718 27-278 (948)
201 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 2.5E-35 5.4E-40 316.0 19.3 246 456-716 2-260 (286)
202 cd06613 STKc_MAP4K3_like Catal 100.0 7.3E-35 1.6E-39 307.4 22.6 249 455-716 3-258 (262)
203 cd06645 STKc_MAP4K3 Catalytic 100.0 3.3E-35 7.2E-40 311.6 20.1 244 455-714 9-261 (267)
204 KOG0196 Tyrosine kinase, EPH ( 100.0 2.6E-36 5.7E-41 337.7 11.9 250 458-724 632-892 (996)
205 cd08223 STKc_Nek4 Catalytic do 100.0 9.3E-35 2E-39 305.9 23.1 243 456-716 1-252 (257)
206 KOG1094 Discoidin domain recep 100.0 9E-36 2E-40 324.0 15.6 258 455-721 538-802 (807)
207 cd05047 PTKc_Tie Catalytic dom 100.0 3.7E-35 8.1E-40 312.3 20.2 243 462-723 2-268 (270)
208 cd07875 STKc_JNK1 Catalytic do 100.0 2.7E-35 6E-40 327.7 19.9 250 453-718 22-318 (364)
209 cd06615 PKc_MEK Catalytic doma 100.0 6.4E-35 1.4E-39 317.1 22.2 248 455-716 1-285 (308)
210 cd08219 STKc_Nek3 Catalytic do 100.0 5.1E-35 1.1E-39 308.0 20.6 243 456-716 1-250 (255)
211 cd05099 PTKc_FGFR4 Catalytic d 100.0 7E-35 1.5E-39 317.6 22.4 255 455-725 12-295 (314)
212 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 3E-35 6.5E-40 314.3 19.0 232 462-719 2-272 (274)
213 cd06609 STKc_MST3_like Catalyt 100.0 3.5E-35 7.7E-40 312.8 19.5 240 456-716 2-249 (274)
214 cd06656 STKc_PAK3 Catalytic do 100.0 3.8E-35 8.2E-40 317.2 19.9 247 455-718 19-269 (297)
215 cd05622 STKc_ROCK1 Catalytic d 100.0 1.8E-35 4E-40 330.1 17.9 249 447-714 35-300 (371)
216 cd07868 STKc_CDK8 Catalytic do 100.0 3.9E-35 8.5E-40 319.6 19.9 193 460-661 6-217 (317)
217 cd05042 PTKc_Aatyk Catalytic d 100.0 6.1E-35 1.3E-39 310.1 20.8 246 462-720 2-267 (269)
218 cd05034 PTKc_Src_like Catalyti 100.0 1.2E-34 2.6E-39 306.0 23.0 250 454-722 5-260 (261)
219 cd05100 PTKc_FGFR3 Catalytic d 100.0 8.4E-35 1.8E-39 319.8 22.6 255 455-725 12-295 (334)
220 cd05073 PTKc_Hck Catalytic dom 100.0 9.2E-35 2E-39 307.3 22.0 249 455-722 6-259 (260)
221 cd06611 STKc_SLK_like Catalyti 100.0 4.8E-35 1E-39 312.8 20.0 246 455-717 5-261 (280)
222 KOG4717 Serine/threonine prote 100.0 1.8E-35 3.9E-40 316.8 16.5 241 457-716 20-268 (864)
223 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 3E-35 6.5E-40 314.1 18.2 259 456-723 5-283 (284)
224 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 5.9E-35 1.3E-39 307.5 20.2 232 462-720 2-258 (259)
225 cd07878 STKc_p38beta_MAPK11 Ca 100.0 2.8E-35 6.1E-40 324.7 18.6 250 452-718 12-298 (343)
226 KOG0033 Ca2+/calmodulin-depend 100.0 1.3E-36 2.8E-41 300.4 6.9 246 454-717 10-266 (355)
227 cd05597 STKc_DMPK_like Catalyt 100.0 5.3E-35 1.1E-39 321.2 20.4 247 455-716 1-264 (331)
228 cd05057 PTKc_EGFR_like Catalyt 100.0 1.3E-34 2.8E-39 309.5 22.6 252 455-724 7-269 (279)
229 cd06642 STKc_STK25-YSK1 Cataly 100.0 5.2E-35 1.1E-39 312.2 19.3 242 457-719 6-254 (277)
230 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 1.7E-35 3.6E-40 312.8 15.3 235 462-720 2-257 (258)
231 cd05112 PTKc_Itk Catalytic dom 100.0 1.4E-34 3.1E-39 304.5 22.3 245 456-720 5-255 (256)
232 cd06651 STKc_MEKK3 Catalytic d 100.0 1.1E-34 2.3E-39 307.9 21.5 247 455-716 2-259 (266)
233 KOG0612 Rho-associated, coiled 100.0 5.6E-36 1.2E-40 346.8 12.5 247 447-711 67-328 (1317)
234 cd05044 PTKc_c-ros Catalytic d 100.0 8E-35 1.7E-39 308.8 20.4 244 462-721 2-268 (269)
235 cd06636 STKc_MAP4K4_6 Catalyti 100.0 7.3E-35 1.6E-39 311.7 20.2 255 445-715 6-276 (282)
236 cd06639 STKc_myosinIIIB Cataly 100.0 1.1E-34 2.3E-39 312.1 21.5 256 445-716 12-285 (291)
237 cd06658 STKc_PAK5 Catalytic do 100.0 5E-35 1.1E-39 315.6 18.8 245 460-721 27-275 (292)
238 cd07867 STKc_CDC2L6 Catalytic 100.0 7.9E-35 1.7E-39 316.8 20.6 193 460-661 6-217 (317)
239 cd07873 STKc_PCTAIRE1 Catalyti 100.0 5.3E-35 1.1E-39 316.3 19.0 250 455-716 6-284 (301)
240 KOG0660 Mitogen-activated prot 100.0 1.7E-35 3.6E-40 309.5 14.3 257 452-720 19-312 (359)
241 cd05586 STKc_Sck1_like Catalyt 100.0 1.2E-35 2.7E-40 325.9 13.9 238 463-721 1-252 (330)
242 KOG0594 Protein kinase PCTAIRE 100.0 3.3E-35 7.2E-40 308.3 16.2 251 456-716 12-300 (323)
243 PHA03207 serine/threonine kina 100.0 3E-35 6.4E-40 330.9 16.4 249 454-718 91-375 (392)
244 cd06659 STKc_PAK6 Catalytic do 100.0 1.2E-34 2.5E-39 313.5 20.5 239 460-717 26-270 (297)
245 cd05623 STKc_MRCK_alpha Cataly 100.0 6.8E-35 1.5E-39 320.5 18.9 247 455-715 1-263 (332)
246 cd08227 PK_STRAD_alpha Pseudok 100.0 1.8E-34 4E-39 316.2 22.1 253 460-716 3-305 (327)
247 cd05041 PTKc_Fes_like Catalyti 100.0 2.4E-34 5.2E-39 301.9 21.9 242 462-721 2-250 (251)
248 cd06652 STKc_MEKK2 Catalytic d 100.0 2.4E-34 5.3E-39 304.8 22.1 247 455-716 2-259 (265)
249 cd05624 STKc_MRCK_beta Catalyt 100.0 6.1E-35 1.3E-39 320.7 18.0 240 455-708 1-254 (331)
250 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 8.5E-35 1.9E-39 311.9 18.7 242 455-714 5-262 (284)
251 cd06640 STKc_MST4 Catalytic do 100.0 2.5E-34 5.4E-39 307.1 22.0 246 456-720 5-255 (277)
252 cd06632 STKc_MEKK1_plant Catal 100.0 1.8E-34 3.9E-39 303.4 20.5 243 456-716 1-253 (258)
253 KOG0608 Warts/lats-like serine 100.0 1.3E-34 2.8E-39 316.5 19.7 201 456-662 630-873 (1034)
254 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 4E-34 8.7E-39 307.3 23.3 250 455-717 1-265 (287)
255 KOG4257 Focal adhesion tyrosin 100.0 4E-35 8.7E-40 320.3 15.4 256 449-723 383-649 (974)
256 cd08217 STKc_Nek2 Catalytic do 100.0 1.1E-34 2.4E-39 305.7 18.3 247 456-716 1-260 (265)
257 cd08221 STKc_Nek9 Catalytic do 100.0 3.5E-34 7.6E-39 301.6 22.1 243 456-716 1-251 (256)
258 cd06610 STKc_OSR1_SPAK Catalyt 100.0 3.1E-34 6.7E-39 303.2 21.4 254 455-716 1-262 (267)
259 cd05574 STKc_phototropin_like 100.0 3.8E-34 8.3E-39 311.6 22.6 254 456-720 2-287 (316)
260 PHA03211 serine/threonine kina 100.0 1.5E-34 3.3E-39 329.6 20.1 247 454-716 168-453 (461)
261 cd05074 PTKc_Tyro3 Catalytic d 100.0 3.1E-34 6.7E-39 304.9 21.2 251 457-723 1-272 (273)
262 cd08218 STKc_Nek1 Catalytic do 100.0 1.4E-34 3E-39 304.6 18.2 244 456-717 1-252 (256)
263 cd08220 STKc_Nek8 Catalytic do 100.0 2.5E-34 5.5E-39 302.2 20.0 243 456-717 1-252 (256)
264 PF00069 Pkinase: Protein kina 100.0 3.4E-35 7.3E-40 309.3 13.4 245 457-715 1-254 (260)
265 PHA03209 serine/threonine kina 100.0 1.1E-34 2.3E-39 322.3 18.0 190 452-660 63-256 (357)
266 cd06629 STKc_MAPKKK_Bck1_like 100.0 3.4E-34 7.5E-39 304.6 21.1 248 456-716 2-267 (272)
267 KOG0574 STE20-like serine/thre 100.0 1.9E-36 4.1E-41 306.2 3.5 247 457-720 35-285 (502)
268 cd05046 PTK_CCK4 Pseudokinase 100.0 3.4E-34 7.4E-39 305.2 21.0 250 455-720 5-273 (275)
269 cd07847 STKc_CDKL1_4 Catalytic 100.0 3.4E-34 7.3E-39 306.6 20.4 250 455-716 1-281 (286)
270 cd06608 STKc_myosinIII_like Ca 100.0 2.8E-34 6.1E-39 304.5 19.7 249 452-716 3-270 (275)
271 cd06630 STKc_MEKK1 Catalytic d 100.0 2.4E-34 5.1E-39 304.8 19.1 248 456-716 1-262 (268)
272 cd07846 STKc_CDKL2_3 Catalytic 100.0 1.3E-34 2.7E-39 310.1 16.8 250 455-716 1-281 (286)
273 cd05086 PTKc_Aatyk2 Catalytic 100.0 6E-34 1.3E-38 302.8 21.8 247 462-720 2-266 (268)
274 cd06623 PKc_MAPKK_plant_like C 100.0 5.3E-34 1.2E-38 300.9 21.2 246 455-717 1-255 (264)
275 cd07860 STKc_CDK2_3 Catalytic 100.0 2.8E-34 6E-39 307.3 19.3 250 456-716 1-279 (284)
276 smart00219 TyrKc Tyrosine kina 100.0 5.8E-34 1.3E-38 299.3 21.3 243 458-718 2-256 (258)
277 cd05609 STKc_MAST Catalytic do 100.0 7.3E-34 1.6E-38 308.1 22.6 254 455-721 1-272 (305)
278 KOG1151 Tousled-like protein k 100.0 2.9E-33 6.2E-38 295.3 26.2 255 452-713 460-736 (775)
279 cd06617 PKc_MKK3_6 Catalytic d 100.0 4.6E-34 9.9E-39 305.3 20.3 246 455-716 1-259 (283)
280 cd06647 STKc_PAK_I Catalytic d 100.0 6.8E-34 1.5E-38 306.8 21.8 250 455-721 19-272 (293)
281 cd06917 STKc_NAK1_like Catalyt 100.0 5.7E-34 1.2E-38 303.8 20.8 243 456-717 2-254 (277)
282 cd06648 STKc_PAK_II Catalytic 100.0 5E-34 1.1E-38 306.5 20.4 241 457-716 21-267 (285)
283 cd06641 STKc_MST3 Catalytic do 100.0 1E-33 2.2E-38 302.3 22.4 241 457-718 6-253 (277)
284 cd07870 STKc_PFTAIRE2 Catalyti 100.0 9.7E-34 2.1E-38 304.6 22.3 252 453-716 3-286 (291)
285 cd07841 STKc_CDK7 Catalytic do 100.0 4.7E-34 1E-38 308.0 19.7 249 456-716 1-280 (298)
286 cd07836 STKc_Pho85 Catalytic d 100.0 6.6E-34 1.4E-38 304.2 20.3 251 456-716 1-279 (284)
287 cd06626 STKc_MEKK4 Catalytic d 100.0 8.1E-34 1.7E-38 299.7 20.7 249 456-716 1-259 (264)
288 cd06605 PKc_MAPKK Catalytic do 100.0 2.9E-34 6.3E-39 303.5 17.2 243 456-716 2-255 (265)
289 cd08528 STKc_Nek10 Catalytic d 100.0 9.4E-34 2E-38 300.8 21.1 248 456-720 1-267 (269)
290 KOG0579 Ste20-like serine/thre 100.0 2.9E-35 6.3E-40 320.8 9.7 246 459-719 36-290 (1187)
291 KOG0584 Serine/threonine prote 100.0 7.3E-35 1.6E-39 322.2 12.9 241 461-722 46-300 (632)
292 cd06607 STKc_TAO Catalytic dom 100.0 1.5E-33 3.3E-38 305.9 23.1 242 455-717 15-266 (307)
293 cd07832 STKc_CCRK Catalytic do 100.0 5.4E-34 1.2E-38 305.0 19.3 250 456-716 1-280 (286)
294 KOG0690 Serine/threonine prote 100.0 2.3E-35 4.9E-40 301.4 8.1 238 455-713 168-414 (516)
295 cd06614 STKc_PAK Catalytic dom 100.0 1.1E-33 2.5E-38 303.3 21.8 247 452-716 16-268 (286)
296 cd07844 STKc_PCTAIRE_like Cata 100.0 1.1E-33 2.4E-38 304.0 21.5 249 455-715 5-285 (291)
297 cd07839 STKc_CDK5 Catalytic do 100.0 4.2E-34 9.1E-39 305.9 18.2 248 456-715 1-278 (284)
298 cd08225 STKc_Nek5 Catalytic do 100.0 5.5E-34 1.2E-38 299.8 18.7 243 456-716 1-252 (257)
299 cd05122 PKc_STE Catalytic doma 100.0 1.3E-33 2.8E-38 294.5 21.3 243 456-716 1-249 (253)
300 cd05580 STKc_PKA Catalytic dom 100.0 1.3E-33 2.7E-38 303.9 21.7 234 455-712 1-243 (290)
301 cd07835 STKc_CDK1_like Catalyt 100.0 8.7E-34 1.9E-38 303.3 20.3 249 457-716 1-278 (283)
302 cd07833 STKc_CDKL Catalytic do 100.0 6E-34 1.3E-38 305.0 19.0 249 456-715 2-282 (288)
303 cd06616 PKc_MKK4 Catalytic dom 100.0 5E-34 1.1E-38 306.2 18.2 248 456-718 5-267 (288)
304 KOG0199 ACK and related non-re 100.0 7.1E-34 1.5E-38 314.1 19.6 242 460-717 115-366 (1039)
305 PLN00113 leucine-rich repeat r 100.0 1.4E-33 3E-38 352.4 24.8 249 454-724 689-952 (968)
306 KOG0983 Mitogen-activated prot 100.0 2.3E-34 5E-39 288.6 14.0 256 462-735 99-366 (391)
307 cd05578 STKc_Yank1 Catalytic d 100.0 3.6E-34 7.9E-39 302.0 16.0 238 456-712 1-247 (258)
308 cd07837 STKc_CdkB_plant Cataly 100.0 9.1E-34 2E-38 305.0 18.8 252 455-716 1-289 (295)
309 cd05577 STKc_GRK Catalytic dom 100.0 8.2E-34 1.8E-38 303.1 18.0 236 463-714 1-245 (277)
310 KOG0596 Dual specificity; seri 100.0 1.9E-34 4E-39 313.1 12.8 250 455-720 361-629 (677)
311 cd06606 STKc_MAPKKK Catalytic 100.0 4.5E-33 9.8E-38 291.6 22.8 247 456-717 1-256 (260)
312 PHA02882 putative serine/threo 100.0 1.2E-33 2.5E-38 305.3 18.8 256 455-720 12-293 (294)
313 cd06653 STKc_MEKK3_like_1 Cata 100.0 2.4E-33 5.2E-38 297.2 20.4 246 455-715 2-258 (264)
314 cd05572 STKc_cGK_PKG Catalytic 100.0 2.8E-33 6.1E-38 296.0 20.5 232 463-714 1-243 (262)
315 cd07843 STKc_CDC2L1 Catalytic 100.0 2.8E-33 6.2E-38 301.3 20.8 250 455-716 5-288 (293)
316 KOG4645 MAPKKK (MAP kinase kin 100.0 5.1E-35 1.1E-39 342.7 7.4 253 450-718 1230-1494(1509)
317 cd06635 STKc_TAO1 Catalytic do 100.0 5E-33 1.1E-37 303.5 22.6 241 457-720 27-279 (317)
318 cd08216 PK_STRAD Pseudokinase 100.0 3.6E-33 7.7E-38 303.6 21.3 254 461-718 8-295 (314)
319 cd07842 STKc_CDK8_like Catalyt 100.0 2.3E-33 5E-38 304.7 19.5 199 456-661 1-217 (316)
320 cd07850 STKc_JNK Catalytic dom 100.0 3.8E-33 8.3E-38 309.1 21.0 252 453-720 14-313 (353)
321 PLN00009 cyclin-dependent kina 100.0 2.9E-33 6.4E-38 301.3 19.6 252 455-717 2-283 (294)
322 cd07849 STKc_ERK1_2_like Catal 100.0 1.9E-33 4E-38 309.4 18.4 254 454-718 4-292 (336)
323 cd06627 STKc_Cdc7_like Catalyt 100.0 7.1E-33 1.5E-37 290.3 21.6 242 456-715 1-248 (254)
324 cd06657 STKc_PAK4 Catalytic do 100.0 5.3E-33 1.1E-37 299.9 20.6 239 461-718 26-270 (292)
325 cd07831 STKc_MOK Catalytic dom 100.0 4.1E-33 8.9E-38 297.5 19.2 246 457-716 1-277 (282)
326 cd06618 PKc_MKK7 Catalytic dom 100.0 3.1E-33 6.7E-38 301.8 18.3 248 455-720 15-275 (296)
327 cd05633 STKc_GRK3 Catalytic do 100.0 3.3E-33 7.3E-38 299.3 18.4 231 462-711 1-243 (279)
328 cd07852 STKc_MAPK15 Catalytic 100.0 4.5E-33 9.8E-38 306.4 19.8 257 453-718 5-295 (337)
329 KOG0696 Serine/threonine prote 100.0 6.2E-34 1.3E-38 298.3 12.1 238 455-713 349-596 (683)
330 cd07840 STKc_CDK9_like Catalyt 100.0 6.8E-33 1.5E-37 296.1 20.5 248 457-715 1-281 (287)
331 cd07855 STKc_ERK5 Catalytic do 100.0 3E-33 6.5E-38 307.5 18.1 256 454-718 4-294 (334)
332 cd07845 STKc_CDK10 Catalytic d 100.0 6.8E-33 1.5E-37 301.0 20.5 250 455-716 7-288 (309)
333 PHA03390 pk1 serine/threonine- 100.0 7.7E-33 1.7E-37 294.5 20.0 242 447-712 6-255 (267)
334 cd07864 STKc_CDK12 Catalytic d 100.0 7.3E-33 1.6E-37 299.1 19.9 254 452-716 4-297 (302)
335 PHA03210 serine/threonine kina 100.0 1.9E-33 4.2E-38 325.4 16.2 256 453-717 146-453 (501)
336 cd08215 STKc_Nek Catalytic dom 100.0 4.7E-33 1E-37 291.7 17.6 244 456-716 1-253 (258)
337 cd05118 STKc_CMGC Catalytic do 100.0 9.9E-33 2.1E-37 294.5 20.3 248 457-716 1-278 (283)
338 KOG4250 TANK binding protein k 100.0 7.3E-34 1.6E-38 317.7 11.9 195 457-661 15-225 (732)
339 cd07865 STKc_CDK9 Catalytic do 100.0 1.3E-32 2.7E-37 297.9 21.2 254 455-716 12-305 (310)
340 cd05579 STKc_MAST_like Catalyt 100.0 7.4E-33 1.6E-37 291.7 18.9 243 463-721 1-256 (265)
341 KOG0667 Dual-specificity tyros 100.0 3.9E-33 8.5E-38 311.4 17.5 252 456-722 187-506 (586)
342 cd05581 STKc_PDK1 Catalytic do 100.0 5.7E-33 1.2E-37 295.6 18.1 245 455-712 1-267 (280)
343 cd07858 STKc_TEY_MAPK_plant Ca 100.0 3.9E-33 8.4E-38 307.1 17.4 252 454-718 4-291 (337)
344 cd07830 STKc_MAK_like Catalyti 100.0 7E-33 1.5E-37 296.1 18.6 248 457-716 1-278 (283)
345 cd08530 STKc_CNK2-like Catalyt 100.0 1.2E-32 2.6E-37 289.2 20.0 242 456-716 1-251 (256)
346 cd05613 STKc_MSK1_N N-terminal 100.0 6E-33 1.3E-37 298.3 17.8 241 456-712 1-257 (290)
347 KOG0614 cGMP-dependent protein 100.0 2.5E-34 5.5E-39 308.3 6.7 233 460-712 425-666 (732)
348 cd07877 STKc_p38alpha_MAPK14 C 100.0 9.1E-33 2E-37 305.3 19.3 257 445-718 7-300 (345)
349 cd07866 STKc_BUR1 Catalytic do 100.0 8.2E-33 1.8E-37 299.5 18.5 257 454-716 7-306 (311)
350 cd07838 STKc_CDK4_6_like Catal 100.0 2.7E-32 5.8E-37 291.8 22.2 248 457-716 1-282 (287)
351 cd07879 STKc_p38delta_MAPK13 C 100.0 8.3E-33 1.8E-37 305.2 18.6 246 454-717 14-296 (342)
352 cd05611 STKc_Rim15_like Cataly 100.0 1.9E-32 4.2E-37 289.2 20.3 232 461-713 2-243 (260)
353 cd07880 STKc_p38gamma_MAPK12 C 100.0 1.3E-32 2.9E-37 303.7 19.6 250 451-717 11-297 (343)
354 cd05606 STKc_beta_ARK Catalyti 100.0 1.3E-32 2.7E-37 294.5 18.7 230 462-710 1-242 (278)
355 KOG1006 Mitogen-activated prot 100.0 2.9E-34 6.3E-39 287.1 4.4 252 443-714 59-323 (361)
356 KOG1025 Epidermal growth facto 100.0 6.4E-33 1.4E-37 311.2 15.7 248 458-723 699-957 (1177)
357 cd08226 PK_STRAD_beta Pseudoki 100.0 4.7E-32 1E-36 297.3 22.2 255 462-720 5-310 (328)
358 KOG1035 eIF-2alpha kinase GCN2 100.0 3.8E-33 8.2E-38 325.9 14.1 252 453-717 477-870 (1351)
359 cd08222 STKc_Nek11 Catalytic d 100.0 3.2E-32 7E-37 287.5 20.0 243 456-716 1-255 (260)
360 cd07834 STKc_MAPK Catalytic do 100.0 2.3E-32 5E-37 299.5 19.5 253 456-718 1-289 (330)
361 cd05583 STKc_MSK_N N-terminal 100.0 1.2E-32 2.6E-37 295.6 17.0 249 456-721 1-265 (288)
362 cd06633 STKc_TAO3 Catalytic do 100.0 4.4E-32 9.6E-37 295.6 21.5 238 457-717 23-272 (313)
363 KOG0586 Serine/threonine prote 100.0 5.9E-33 1.3E-37 306.9 14.6 247 451-719 52-307 (596)
364 cd06634 STKc_TAO2 Catalytic do 100.0 4E-32 8.6E-37 295.2 20.5 238 457-717 17-266 (308)
365 cd07829 STKc_CDK_like Catalyti 100.0 3.6E-32 7.8E-37 290.0 19.7 247 457-716 1-277 (282)
366 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 4.6E-32 9.9E-37 297.6 20.7 251 449-716 4-286 (328)
367 KOG3653 Transforming growth fa 100.0 4.2E-32 9.1E-37 290.8 18.7 250 460-724 215-504 (534)
368 cd07854 STKc_MAPK4_6 Catalytic 100.0 2.9E-32 6.2E-37 300.9 17.9 251 455-716 5-298 (342)
369 PTZ00024 cyclin-dependent prot 100.0 5.8E-32 1.2E-36 297.2 19.7 255 456-717 9-312 (335)
370 KOG0604 MAP kinase-activated p 100.0 6.7E-33 1.5E-37 281.4 11.0 244 452-716 58-320 (400)
371 KOG2052 Activin A type IB rece 100.0 5.8E-32 1.2E-36 287.8 17.9 258 455-725 211-505 (513)
372 cd07857 STKc_MPK1 Catalytic do 100.0 7.7E-32 1.7E-36 296.1 19.2 254 456-718 1-292 (332)
373 cd05123 STKc_AGC Catalytic dom 100.0 1.7E-31 3.7E-36 279.6 19.8 230 463-713 1-239 (250)
374 cd07851 STKc_p38 Catalytic dom 100.0 4.4E-32 9.5E-37 299.5 15.8 248 452-716 12-296 (343)
375 KOG0607 MAP kinase-interacting 100.0 2.1E-32 4.6E-37 279.5 12.2 251 447-713 75-356 (463)
376 cd05576 STKc_RPK118_like Catal 100.0 1.2E-31 2.7E-36 280.0 17.4 218 466-714 4-225 (237)
377 KOG4236 Serine/threonine prote 100.0 1.2E-32 2.6E-37 295.8 9.7 238 460-714 569-815 (888)
378 KOG0200 Fibroblast/platelet-de 100.0 1.9E-31 4.2E-36 314.1 19.5 255 452-723 293-579 (609)
379 cd05610 STKc_MASTL Catalytic d 100.0 4.3E-31 9.4E-36 315.4 21.7 143 455-603 4-153 (669)
380 KOG0587 Traf2- and Nck-interac 100.0 2.9E-31 6.2E-36 301.9 17.7 257 446-718 10-282 (953)
381 KOG0695 Serine/threonine prote 100.0 7.7E-32 1.7E-36 276.2 8.6 247 455-713 250-505 (593)
382 KOG0603 Ribosomal protein S6 k 100.0 2.3E-31 4.9E-36 295.9 13.1 237 454-721 321-566 (612)
383 KOG0666 Cyclin C-dependent kin 100.0 1.7E-31 3.8E-36 272.1 6.3 199 456-661 25-241 (438)
384 smart00220 S_TKc Serine/Threon 100.0 1.7E-29 3.8E-34 261.2 20.4 231 467-716 1-239 (244)
385 PLN03224 probable serine/threo 100.0 1.5E-29 3.3E-34 288.8 19.5 256 453-716 143-498 (507)
386 PLN03225 Serine/threonine-prot 100.0 2.1E-29 4.6E-34 294.2 17.5 254 453-718 130-450 (566)
387 KOG1027 Serine/threonine prote 100.0 1.8E-30 4E-35 294.1 7.6 247 456-718 510-767 (903)
388 KOG0984 Mitogen-activated prot 100.0 7.4E-30 1.6E-34 247.3 10.4 200 455-664 46-256 (282)
389 KOG0671 LAMMER dual specificit 100.0 8.8E-30 1.9E-34 267.3 8.8 252 454-720 88-408 (415)
390 KOG0669 Cyclin T-dependent kin 100.0 5.5E-30 1.2E-34 254.4 5.6 252 457-716 19-313 (376)
391 KOG0662 Cyclin-dependent kinas 100.0 5.5E-29 1.2E-33 235.9 11.8 194 456-661 3-204 (292)
392 KOG1024 Receptor-like protein 100.0 1.1E-28 2.3E-33 258.2 12.3 264 446-725 275-557 (563)
393 cd00180 PKc Catalytic domain o 99.9 1.2E-26 2.6E-31 233.4 20.2 203 463-714 1-210 (215)
394 KOG0576 Mitogen-activated prot 99.9 4.2E-28 9.2E-33 268.4 5.9 249 455-717 15-270 (829)
395 KOG0668 Casein kinase II, alph 99.9 3.4E-27 7.4E-32 231.7 10.4 246 454-718 37-322 (338)
396 smart00221 STYKc Protein kinas 99.9 5.6E-26 1.2E-30 233.0 19.5 196 457-662 1-202 (225)
397 KOG0664 Nemo-like MAPK-related 99.9 7.7E-28 1.7E-32 241.3 1.2 194 456-661 54-259 (449)
398 KOG0665 Jun-N-terminal kinase 99.9 5.3E-26 1.2E-30 233.8 10.7 249 455-720 17-312 (369)
399 KOG1152 Signal transduction se 99.9 1.8E-26 3.9E-31 251.7 7.4 193 455-661 561-770 (772)
400 KOG0670 U4/U6-associated splic 99.9 1.5E-26 3.3E-31 249.3 5.4 198 452-662 429-637 (752)
401 KOG1290 Serine/threonine prote 99.9 9.3E-25 2E-29 234.9 16.5 128 455-587 78-221 (590)
402 PLN00181 protein SPA1-RELATED; 99.9 2.3E-25 4.9E-30 272.1 11.4 200 506-719 28-266 (793)
403 KOG1345 Serine/threonine kinas 99.9 2.3E-25 4.9E-30 224.0 8.2 244 455-721 24-286 (378)
404 smart00750 KIND kinase non-cat 99.9 5.8E-24 1.2E-28 211.3 15.0 161 533-719 1-166 (176)
405 KOG1167 Serine/threonine prote 99.9 8.9E-25 1.9E-29 232.8 8.4 258 450-718 31-381 (418)
406 KOG1163 Casein kinase (serine/ 99.9 3.7E-23 8E-28 205.0 15.2 274 455-741 15-302 (341)
407 KOG1165 Casein kinase (serine/ 99.9 1.6E-22 3.5E-27 208.7 20.2 258 454-724 27-300 (449)
408 PRK09188 serine/threonine prot 99.9 5.7E-23 1.2E-27 225.7 14.2 172 449-635 12-195 (365)
409 KOG1164 Casein kinase (serine/ 99.9 2.9E-22 6.3E-27 219.4 19.5 261 456-726 19-300 (322)
410 COG0515 SPS1 Serine/threonine 99.9 5E-21 1.1E-25 204.4 23.6 260 457-720 2-277 (384)
411 KOG0195 Integrin-linked kinase 99.9 1.5E-22 3.2E-27 203.4 8.1 253 444-723 186-446 (448)
412 cd01989 STK_N The N-terminal d 99.8 1.8E-20 3.8E-25 180.9 16.5 136 24-160 1-146 (146)
413 PRK10359 lipopolysaccharide co 99.8 1.5E-20 3.3E-25 192.9 7.5 170 452-654 28-216 (232)
414 cd05147 RIO1_euk RIO kinase fa 99.8 5.1E-20 1.1E-24 186.0 10.2 137 461-604 3-167 (190)
415 KOG0603 Ribosomal protein S6 k 99.8 1.1E-20 2.3E-25 211.1 5.2 222 463-713 2-233 (612)
416 PRK12274 serine/threonine prot 99.8 7.7E-20 1.7E-24 184.0 10.6 189 458-661 5-208 (218)
417 cd05145 RIO1_like RIO kinase f 99.8 3.6E-19 7.9E-24 179.9 13.5 139 461-606 3-169 (190)
418 KOG0590 Checkpoint kinase and 99.8 5.2E-20 1.1E-24 215.0 6.9 245 459-714 322-581 (601)
419 KOG1240 Protein kinase contain 99.8 9.6E-20 2.1E-24 212.0 7.1 247 456-716 24-289 (1431)
420 PRK10345 hypothetical protein; 99.7 6.6E-18 1.4E-22 172.6 12.1 133 458-600 5-155 (210)
421 PF14531 Kinase-like: Kinase-l 99.7 8.7E-18 1.9E-22 177.6 12.7 229 457-709 14-288 (288)
422 KOG1023 Natriuretic peptide re 99.7 1.9E-17 4.2E-22 185.4 10.0 209 504-723 1-224 (484)
423 KOG1033 eIF-2alpha kinase PEK/ 99.7 4.9E-18 1.1E-22 186.6 4.0 176 522-712 330-506 (516)
424 KOG0606 Microtubule-associated 99.7 1.2E-17 2.6E-22 194.8 6.9 210 454-713 82-307 (1205)
425 PRK14879 serine/threonine prot 99.7 8.9E-17 1.9E-21 164.7 12.1 132 461-603 2-143 (211)
426 KOG4158 BRPK/PTEN-induced prot 99.7 1.2E-16 2.5E-21 168.8 12.7 201 508-722 274-513 (598)
427 KOG1166 Mitotic checkpoint ser 99.7 1.2E-16 2.7E-21 190.3 13.8 198 448-658 691-901 (974)
428 TIGR03724 arch_bud32 Kae1-asso 99.7 1.3E-16 2.9E-21 162.0 11.3 128 462-603 1-138 (199)
429 smart00090 RIO RIO-like kinase 99.7 1.6E-16 3.5E-21 166.0 10.8 143 455-605 28-199 (237)
430 cd05144 RIO2_C RIO kinase fami 99.7 4.5E-16 9.8E-21 158.3 12.1 140 452-605 12-176 (198)
431 PRK09605 bifunctional UGMP fam 99.7 3.2E-16 6.9E-21 183.3 12.1 139 451-604 329-477 (535)
432 PRK15456 universal stress prot 99.6 1.6E-14 3.4E-19 138.9 13.0 132 23-158 3-142 (142)
433 cd05120 APH_ChoK_like Aminogly 99.6 1.2E-14 2.7E-19 138.9 11.8 132 460-603 3-138 (155)
434 cd05119 RIO RIO kinase family, 99.6 6.4E-15 1.4E-19 148.0 10.0 135 460-605 2-165 (187)
435 cd01987 USP_OKCHK USP domain i 99.5 5.4E-14 1.2E-18 131.6 12.1 121 24-157 1-123 (124)
436 PRK15005 universal stress prot 99.5 7.3E-14 1.6E-18 134.2 12.6 131 23-158 3-144 (144)
437 PRK01723 3-deoxy-D-manno-octul 99.5 7.2E-14 1.6E-18 146.3 12.5 133 460-603 36-191 (239)
438 PRK15118 universal stress glob 99.5 1.5E-13 3.3E-18 132.3 11.5 127 23-158 4-138 (144)
439 cd01988 Na_H_Antiporter_C The 99.5 5E-13 1.1E-17 126.0 13.3 128 24-158 1-132 (132)
440 KOG0590 Checkpoint kinase and 99.5 9.3E-15 2E-19 171.1 0.6 245 456-714 21-282 (601)
441 PF00582 Usp: Universal stress 99.5 5.5E-13 1.2E-17 125.6 12.7 133 23-158 3-140 (140)
442 PRK09982 universal stress prot 99.4 5.5E-13 1.2E-17 128.3 12.0 127 23-158 4-138 (142)
443 TIGR01982 UbiB 2-polyprenylphe 99.4 1.2E-12 2.5E-17 148.9 11.0 137 461-605 123-308 (437)
444 PRK10116 universal stress prot 99.3 1.4E-11 3E-16 118.2 13.5 128 23-158 4-138 (142)
445 cd05151 ChoK Choline Kinase (C 99.3 3.9E-12 8.4E-17 125.4 9.8 130 461-603 4-136 (170)
446 PRK11175 universal stress prot 99.3 3.5E-11 7.5E-16 130.8 14.5 135 23-160 4-147 (305)
447 KOG1266 Protein kinase [Signal 99.3 3.3E-12 7.2E-17 132.8 4.9 206 502-720 119-333 (458)
448 cd00293 USP_Like Usp: Universa 99.2 7E-11 1.5E-15 109.9 12.2 127 24-157 1-130 (130)
449 KOG0601 Cyclin-dependent kinas 99.2 6.1E-12 1.3E-16 141.5 5.6 243 456-713 115-374 (524)
450 PF04564 U-box: U-box domain; 99.2 4.6E-12 1E-16 107.0 2.7 71 731-801 1-71 (73)
451 PRK11175 universal stress prot 99.2 2.3E-10 4.9E-15 124.4 13.8 132 22-158 152-299 (305)
452 PRK04750 ubiB putative ubiquin 99.1 1.1E-10 2.4E-15 134.5 10.5 142 455-607 120-317 (537)
453 KOG0606 Microtubule-associated 99.1 2.4E-11 5.1E-16 143.0 4.9 249 453-713 802-1084(1205)
454 cd05146 RIO3_euk RIO kinase fa 99.1 1.7E-09 3.6E-14 109.1 13.0 135 461-605 3-175 (197)
455 cd05154 ACAD10_11_like Acyl-Co 99.1 1.1E-09 2.4E-14 112.5 12.0 139 461-603 4-206 (223)
456 COG4248 Uncharacterized protei 99.0 8.4E-09 1.8E-13 111.1 17.5 251 459-724 15-301 (637)
457 COG3642 Mn2+-dependent serine/ 99.0 1.9E-09 4E-14 105.5 11.3 128 462-603 3-140 (204)
458 KOG0601 Cyclin-dependent kinas 99.0 3.1E-10 6.8E-15 127.9 6.3 244 445-713 254-509 (524)
459 COG0589 UspA Universal stress 99.0 6.5E-09 1.4E-13 100.1 13.3 133 23-158 6-151 (154)
460 KOG3087 Serine/threonine prote 99.0 6.6E-09 1.4E-13 101.1 12.3 141 459-603 11-165 (229)
461 KOG1243 Protein kinase [Genera 98.9 6.1E-09 1.3E-13 118.6 13.0 162 477-656 36-199 (690)
462 KOG3741 Poly(A) ribonuclease s 98.7 3E-07 6.6E-12 101.9 16.0 202 469-708 290-512 (655)
463 PRK15123 lipopolysaccharide co 98.7 1.7E-07 3.7E-12 99.6 13.7 137 463-603 30-194 (268)
464 PF01163 RIO1: RIO1 family; I 98.6 2.5E-07 5.5E-12 92.9 11.8 125 470-605 1-157 (188)
465 PRK12652 putative monovalent c 98.5 4.5E-07 9.9E-12 99.6 10.6 99 23-127 6-122 (357)
466 PF06293 Kdo: Lipopolysacchari 98.4 1.1E-06 2.3E-11 90.1 9.9 124 475-604 29-171 (206)
467 KOG2137 Protein kinase [Signal 98.4 9.4E-08 2E-12 109.5 1.4 150 558-713 106-260 (700)
468 COG0478 RIO-like serine/threon 98.4 2.7E-06 5.8E-11 88.3 11.1 134 456-602 92-250 (304)
469 COG0661 AarF Predicted unusual 98.3 1.3E-06 2.7E-11 100.6 8.5 138 461-606 131-317 (517)
470 PRK09902 hypothetical protein; 98.3 8.9E-06 1.9E-10 82.6 13.2 137 462-603 25-179 (216)
471 KOG1235 Predicted unusual prot 98.2 3.6E-06 7.8E-11 96.5 9.7 139 461-606 167-357 (538)
472 PF12260 PIP49_C: Protein-kina 98.2 2.5E-05 5.3E-10 78.8 14.4 105 498-604 7-112 (188)
473 smart00504 Ubox Modified RING 98.2 7.6E-07 1.7E-11 72.8 2.4 62 735-797 2-63 (63)
474 TIGR02172 Fb_sc_TIGR02172 Fibr 98.2 1.2E-05 2.7E-10 83.5 11.5 137 461-602 7-181 (226)
475 PF01636 APH: Phosphotransfera 98.1 1.8E-05 4E-10 81.5 10.9 141 461-603 3-197 (239)
476 PF06176 WaaY: Lipopolysacchar 98.1 2.2E-05 4.9E-10 80.0 10.4 135 453-602 29-182 (229)
477 PRK10490 sensor protein KdpD; 98.1 3.1E-05 6.8E-10 96.1 14.0 121 20-158 248-373 (895)
478 cd05150 APH Aminoglycoside 3'- 97.9 6E-05 1.3E-09 79.1 10.5 137 463-602 6-192 (244)
479 COG1718 RIO1 Serine/threonine 97.9 9.8E-05 2.1E-09 76.2 11.3 135 462-605 55-217 (268)
480 COG2205 KdpD Osmosensitive K+ 97.8 0.00019 4.1E-09 84.1 13.4 132 20-166 246-381 (890)
481 KOG0576 Mitogen-activated prot 97.8 4.2E-06 9.1E-11 95.1 -0.3 186 454-661 241-431 (829)
482 PLN02876 acyl-CoA dehydrogenas 97.8 0.00024 5.3E-09 87.7 14.4 146 460-605 43-259 (822)
483 TIGR02721 ycfN_thiK thiamine k 97.7 9.4E-05 2E-09 78.3 8.1 137 463-602 4-174 (256)
484 COG2112 Predicted Ser/Thr prot 97.7 0.0002 4.4E-09 70.1 9.1 127 460-603 27-155 (201)
485 cd05155 APH_ChoK_like_1 Unchar 97.7 0.00024 5.2E-09 74.3 10.6 71 461-536 3-82 (235)
486 PRK10593 hypothetical protein; 97.6 0.00078 1.7E-08 73.1 12.8 73 461-535 20-100 (297)
487 cd05157 ETNK_euk Ethanolamine 97.5 0.0004 8.7E-09 72.3 9.8 139 461-602 4-200 (235)
488 PF13095 FTA2: Kinetochore Sim 97.5 0.00051 1.1E-08 69.4 9.8 124 454-601 36-206 (207)
489 PF10707 YrbL-PhoP_reg: PhoP r 97.4 0.0013 2.7E-08 66.9 11.9 131 459-601 5-170 (199)
490 cd05153 HomoserineK_II Homoser 97.4 0.00077 1.7E-08 72.8 9.9 140 460-602 19-204 (296)
491 PRK09550 mtnK methylthioribose 97.3 0.0021 4.5E-08 72.1 13.1 74 461-534 32-117 (401)
492 KOG4642 Chaperone-dependent E3 97.2 0.0002 4.3E-09 72.6 3.1 74 728-801 205-278 (284)
493 cd05156 ChoK_euk Choline Kinas 97.2 0.0018 3.8E-08 70.3 10.5 138 462-602 5-212 (302)
494 KOG1826 Ras GTPase activating 97.2 9.1E-05 2E-09 91.3 0.1 159 497-661 1276-1441(2724)
495 PRK05231 homoserine kinase; Pr 97.1 0.0059 1.3E-07 66.8 13.6 155 445-602 7-216 (319)
496 KOG1035 eIF-2alpha kinase GCN2 97.1 0.0015 3.2E-08 79.6 9.2 196 498-722 230-438 (1351)
497 TIGR00938 thrB_alt homoserine 97.0 0.011 2.3E-07 64.5 13.8 140 461-602 28-216 (307)
498 cd01984 AANH_like Adenine nucl 96.8 0.0026 5.5E-08 55.3 5.8 82 25-155 1-84 (86)
499 PLN02236 choline kinase 96.8 0.0091 2E-07 66.2 11.2 138 462-602 43-230 (344)
500 PLN02756 S-methyl-5-thioribose 96.7 0.014 2.9E-07 65.6 12.1 72 461-532 38-119 (418)
No 1
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-53 Score=466.89 Aligned_cols=274 Identities=47% Similarity=0.790 Sum_probs=241.5
Q ss_pred CCcccCHHHHHHHhcCccccceeeecCceEEEEEEEC-CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccc
Q 003703 441 ESAEFSLADLQTATCNFSESFKVGQGGFGCVYKGEML-GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGAC 519 (801)
Q Consensus 441 ~~~~~~~~el~~at~~f~~~~~LG~G~fG~Vy~g~~~-g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~ 519 (801)
....|++.+|..||++|+..+.||+||||.||+|.+. |..||||++.....+...+|.+|+.+|++++|||+|+|+|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 4567999999999999999999999999999999997 589999988766544144699999999999999999999999
Q ss_pred cC--C-cceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeee
Q 003703 520 PE--A-WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKIC 596 (801)
Q Consensus 520 ~~--~-~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~ 596 (801)
.+ . .+||||||++|||.++|+..... +++|..|++|+.++|.||+|||...+++||||||||+|||||.++++||+
T Consensus 141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKls 219 (361)
T KOG1187|consen 141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGE-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLS 219 (361)
T ss_pred ecCCceEEEEEEccCCCCHHHHhCCCCCC-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEcc
Confidence 53 2 79999999999999999887654 89999999999999999999999998899999999999999999999999
Q ss_pred cccceeeccC-CCCcCCCccccCCC-CCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCC---------ChhH
Q 003703 597 DFGICRLVTE-DTLYLPSFHRSTAP-KGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVG---------LAGE 665 (801)
Q Consensus 597 DFGla~~~~~-~~~~~~~~~~~~~~-~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~---------~~~~ 665 (801)
|||+|+..+. ... .... .||++|+||||+..+.++.|+|||||||+|+||+||+.|.+ +..|
T Consensus 220 DFGLa~~~~~~~~~-------~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w 292 (361)
T KOG1187|consen 220 DFGLAKLGPEGDTS-------VSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEW 292 (361)
T ss_pred CccCcccCCccccc-------eeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHH
Confidence 9999977654 221 1111 79999999999999999999999999999999999998875 3566
Q ss_pred HHHHhhcCccccccCCCC--CCCCH-HHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHHh
Q 003703 666 VRRAVSCGKLSSILDPLA--GDWPT-FVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 723 (801)
Q Consensus 666 ~~~~~~~g~~~~~~d~~~--~~~~~-~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~l 723 (801)
++..+..+++.+++|+.. +.++. .....+..++.+|++.+|.+||+|. +|++.|+.+
T Consensus 293 ~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~-~Vv~~L~~~ 352 (361)
T KOG1187|consen 293 AKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMS-QVVKELEGI 352 (361)
T ss_pred HHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHH-HHHHHHHhh
Confidence 778888999999999986 46665 5788899999999999999999999 577887654
No 2
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=9.7e-46 Score=405.27 Aligned_cols=247 Identities=37% Similarity=0.591 Sum_probs=208.7
Q ss_pred ceeeecCceEEEEEEECCeE-EEEEEeccCCccc--HHHHHHHHHHHhcCCCCceeeEeccccCC---cceeeecCCCCc
Q 003703 461 FKVGQGGFGCVYKGEMLGRT-VAIKMLYSHNMQG--QLEFQQEVRVLSKLQHPHLVTLLGACPEA---WSLVYEYLPNGS 534 (801)
Q Consensus 461 ~~LG~G~fG~Vy~g~~~g~~-vAiK~l~~~~~~~--~~~f~~E~~il~~l~HpnIV~l~g~~~~~---~~LV~E~~~~gs 534 (801)
..||.|+||+||+|.+.|.. ||||++....... ...|.+|+.+|.+++|||||+|+|+|.+. .++|||||++|+
T Consensus 47 ~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~Gs 126 (362)
T KOG0192|consen 47 EVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGGS 126 (362)
T ss_pred hhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCCc
Confidence 34999999999999999988 9999997654433 45899999999999999999999999654 689999999999
Q ss_pred hhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCC-CeeeecccceeeccCCCCcCCC
Q 003703 535 LQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSEL-SSKICDFGICRLVTEDTLYLPS 613 (801)
Q Consensus 535 L~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~-~vKL~DFGla~~~~~~~~~~~~ 613 (801)
|.++|+.. ....++|..+++|+.|||.|+.|||+.++ ||||||||+||||+.++ ++||+|||+++......
T Consensus 127 L~~~l~~~-~~~~l~~~~~l~~aldiArGm~YLH~~~~--iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~----- 198 (362)
T KOG0192|consen 127 LSVLLHKK-RKRKLPLKVRLRIALDIARGMEYLHSEGP--IIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK----- 198 (362)
T ss_pred HHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHhcCCC--eeecccChhhEEEcCCCCEEEECCCccceeecccc-----
Confidence 99999885 33579999999999999999999999885 99999999999999998 99999999998875432
Q ss_pred ccccCCCCCCCCCCCccccc--cCCCCcchhHHhHHHHHHHHHhCCCCCCChhHH--HHHh-hcCccccccCCCCCCCCH
Q 003703 614 FHRSTAPKGSFPYADPEYHR--TGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEV--RRAV-SCGKLSSILDPLAGDWPT 688 (801)
Q Consensus 614 ~~~~~~~~Gt~~Y~APE~~~--~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~--~~~~-~~g~~~~~~d~~~~~~~~ 688 (801)
...+...||+.|||||++. ...|+.|+|||||||+||||+||+.||.....+ ...+ ..+.. ...|.
T Consensus 199 -~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~R--------p~~p~ 269 (362)
T KOG0192|consen 199 -TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLR--------PPIPK 269 (362)
T ss_pred -ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCC--------CCCCc
Confidence 1234578999999999999 669999999999999999999999999865542 2222 22222 22334
Q ss_pred HHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHHhhh
Q 003703 689 FVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHV 725 (801)
Q Consensus 689 ~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~l~~ 725 (801)
.....+..|+.+||+.||..||++. +++..|+.+..
T Consensus 270 ~~~~~l~~l~~~CW~~dp~~RP~f~-ei~~~l~~~~~ 305 (362)
T KOG0192|consen 270 ECPPHLSSLMERCWLVDPSRRPSFL-EIVSRLESIMS 305 (362)
T ss_pred cCCHHHHHHHHHhCCCCCCcCCCHH-HHHHHHHHHHH
Confidence 4667899999999999999999999 78888887654
No 3
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-44 Score=378.60 Aligned_cols=250 Identities=30% Similarity=0.429 Sum_probs=207.1
Q ss_pred cCHHHHHHHhcCccccceeeecCceEEEEEEEC--CeEEEEEEeccCC-cccHHHHHHHHHHHhcCCCCceeeEecccc-
Q 003703 445 FSLADLQTATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHN-MQGQLEFQQEVRVLSKLQHPHLVTLLGACP- 520 (801)
Q Consensus 445 ~~~~el~~at~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~-~~~~~~f~~E~~il~~l~HpnIV~l~g~~~- 520 (801)
+++.||+.. ..||+|..|+||++++. +..+|+|++.... ...+.++.+|++++...+|||||.+||+|.
T Consensus 76 i~~~dle~~-------~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~ 148 (364)
T KOG0581|consen 76 ISLSDLERL-------GVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYS 148 (364)
T ss_pred cCHHHhhhh-------hhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEe
Confidence 455565544 46999999999999997 8999999995443 344567899999999999999999999984
Q ss_pred -C-CcceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCceeeCCCCCCCeeecCCCCeeeec
Q 003703 521 -E-AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHS-SKPEKIVHGDLKPQNILLDSELSSKICD 597 (801)
Q Consensus 521 -~-~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~-~~~~~iiHrDIKp~NILLd~~~~vKL~D 597 (801)
. ...++||||++|||++++... +.++.....+|+.+|++||.|||. .+ ||||||||+|||++..|.|||||
T Consensus 149 ~~~~isI~mEYMDgGSLd~~~k~~---g~i~E~~L~~ia~~VL~GL~YLh~~~~---IIHRDIKPsNlLvNskGeVKicD 222 (364)
T KOG0581|consen 149 NGEEISICMEYMDGGSLDDILKRV---GRIPEPVLGKIARAVLRGLSYLHEERK---IIHRDIKPSNLLVNSKGEVKICD 222 (364)
T ss_pred CCceEEeehhhcCCCCHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhhccC---eeeccCCHHHeeeccCCCEEecc
Confidence 3 378999999999999998665 358889999999999999999996 55 99999999999999999999999
Q ss_pred ccceeeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCCh-----hHHHHHhhc
Q 003703 598 FGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLA-----GEVRRAVSC 672 (801)
Q Consensus 598 FGla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~-----~~~~~~~~~ 672 (801)
||.++.+.+. ...+.+||..|||||.+.+..|+.++||||||++++||.+|+.||... ++. .+
T Consensus 223 FGVS~~lvnS--------~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~-~L--- 290 (364)
T KOG0581|consen 223 FGVSGILVNS--------IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIF-EL--- 290 (364)
T ss_pred ccccHHhhhh--------hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHH-HH---
Confidence 9999987654 235678999999999999999999999999999999999999999753 221 11
Q ss_pred CccccccCCCCCCCCHH-HHHHHHHHHHHhhhhCCCCCCCchHHHHHHHH
Q 003703 673 GKLSSILDPLAGDWPTF-VARRLVDLGLQCCELYGRERPDITPSLVKELE 721 (801)
Q Consensus 673 g~~~~~~d~~~~~~~~~-~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~ 721 (801)
+..+++......|.. .+.++..++..||++||.+||+..+.+.|.+-
T Consensus 291 --l~~Iv~~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi 338 (364)
T KOG0581|consen 291 --LCAIVDEPPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFI 338 (364)
T ss_pred --HHHHhcCCCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHH
Confidence 122333333344554 78899999999999999999999976655543
No 4
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=4.4e-43 Score=381.01 Aligned_cols=245 Identities=24% Similarity=0.295 Sum_probs=195.9
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCccc---HHHHHHHHHHHhcCCCCceeeEeccccC--Ccceee
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQG---QLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVY 527 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~---~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~ 527 (801)
++|.....||+|+||.||+++-. |..+|+|++++..+.. ...+..|..+|....+|+||+||.+|++ ++||||
T Consensus 141 ~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLiM 220 (550)
T KOG0605|consen 141 DDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLIM 220 (550)
T ss_pred ccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEEE
Confidence 45677778999999999999764 9999999999887643 3458899999999999999999999964 689999
Q ss_pred ecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCC
Q 003703 528 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 607 (801)
Q Consensus 528 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~ 607 (801)
||+|||++..+|.+.+ .|+...+..++.+++.|+..||..| ||||||||+|+|||..|++||+|||||.-+...
T Consensus 221 EylPGGD~mTLL~~~~---~L~e~~arfYiaE~vlAI~~iH~~g---yIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~ 294 (550)
T KOG0605|consen 221 EYLPGGDMMTLLMRKD---TLTEDWARFYIAETVLAIESIHQLG---YIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKK 294 (550)
T ss_pred EecCCccHHHHHHhcC---cCchHHHHHHHHHHHHHHHHHHHcC---cccccCChhheeecCCCCEeeccccccchhhhh
Confidence 9999999999998765 6888889999999999999999998 999999999999999999999999999643210
Q ss_pred ---------------C-----CcCCC---c------------------cccCCCCCCCCCCCccccccCCCCcchhHHhH
Q 003703 608 ---------------T-----LYLPS---F------------------HRSTAPKGSFPYADPEYHRTGVLTPKSDSYSF 646 (801)
Q Consensus 608 ---------------~-----~~~~~---~------------------~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSl 646 (801)
. ...+. . ......+|||.|||||++.+.+|+..+|+|||
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSL 374 (550)
T KOG0605|consen 295 HRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSL 374 (550)
T ss_pred hhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHH
Confidence 0 00000 0 00114689999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCh--hHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCC
Q 003703 647 GLIILQLLTGRLPVGLA--GEVRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPD 711 (801)
Q Consensus 647 GvvL~ELltG~~Pf~~~--~~~~~~~~~g~~~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt 711 (801)
||||||||.|.+||... ..++..+...+.. +.-|. ....+.+..+||.+||. ||.+|--
T Consensus 375 G~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~-l~fP~----~~~~s~eA~DLI~rll~-d~~~RLG 435 (550)
T KOG0605|consen 375 GCIMYEMLVGYPPFCSETPQETYRKIVNWRET-LKFPE----EVDLSDEAKDLITRLLC-DPENRLG 435 (550)
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhh-ccCCC----cCcccHHHHHHHHHHhc-CHHHhcC
Confidence 99999999999999643 3344433322210 00010 11234788999999999 9999987
No 5
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.1e-44 Score=392.97 Aligned_cols=246 Identities=26% Similarity=0.392 Sum_probs=212.4
Q ss_pred cCccccceeeecCceEEEEEEE--CCeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccceee
Q 003703 455 CNFSESFKVGQGGFGCVYKGEM--LGRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVY 527 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~--~g~~vAiK~l~~~~~---~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~ 527 (801)
..|...+.||+|||+.||.++. .|..||+|++.+... .....+.+|++|.+.|+|||||+||++|.+ +.|||+
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 4688889999999999999988 399999999977543 233458899999999999999999999965 578999
Q ss_pred ecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCC
Q 003703 528 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 607 (801)
Q Consensus 528 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~ 607 (801)
|+|++++|..++.+. .+++++++..+..||+.||.|||+.+ |||||||..|+||+++.++||+|||||..+..+
T Consensus 98 ELC~~~sL~el~Krr---k~ltEpEary~l~QIv~GlkYLH~~~---IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~ 171 (592)
T KOG0575|consen 98 ELCHRGSLMELLKRR---KPLTEPEARYFLRQIVEGLKYLHSLG---IIHRDLKLGNLFLNENMNVKIGDFGLATQLEYD 171 (592)
T ss_pred EecCCccHHHHHHhc---CCCCcHHHHHHHHHHHHHHHHHHhcC---ceecccchhheeecCcCcEEecccceeeeecCc
Confidence 999999999988754 47899999999999999999999988 999999999999999999999999999988754
Q ss_pred CCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCCh--hHHHHHhhcCccccccCCCCCC
Q 003703 608 TLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLA--GEVRRAVSCGKLSSILDPLAGD 685 (801)
Q Consensus 608 ~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~--~~~~~~~~~g~~~~~~d~~~~~ 685 (801)
. .+..+.+|||.|+|||++....++..+||||+|||||-||+|+|||... .+....+..... .
T Consensus 172 ~------Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y---------~ 236 (592)
T KOG0575|consen 172 G------ERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEY---------S 236 (592)
T ss_pred c------cccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCc---------c
Confidence 3 2457889999999999999999999999999999999999999999743 344444444332 3
Q ss_pred CCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHH
Q 003703 686 WPTFVARRLVDLGLQCCELYGRERPDITPSLVKELE 721 (801)
Q Consensus 686 ~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~ 721 (801)
.|...+....+||.++|+.||.+|||+.+.+.+.+=
T Consensus 237 ~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff 272 (592)
T KOG0575|consen 237 MPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFF 272 (592)
T ss_pred cccccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhh
Confidence 455677889999999999999999999977666553
No 6
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.5e-44 Score=377.65 Aligned_cols=246 Identities=26% Similarity=0.399 Sum_probs=203.0
Q ss_pred HhcCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCccc-------HHHHHHHHHHHhcCCCCceeeEecccc--C
Q 003703 453 ATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQG-------QLEFQQEVRVLSKLQHPHLVTLLGACP--E 521 (801)
Q Consensus 453 at~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~-------~~~f~~E~~il~~l~HpnIV~l~g~~~--~ 521 (801)
..+.|...+.||+|+||.|-+|... |+.||||++++..... ...+.+|+++|.+|+|||||+++++|. +
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d 249 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD 249 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence 3455677889999999999999764 9999999997754322 223579999999999999999999994 4
Q ss_pred CcceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCC---CCeeeecc
Q 003703 522 AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSE---LSSKICDF 598 (801)
Q Consensus 522 ~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~---~~vKL~DF 598 (801)
..||||||+.||.|.+.+..+. .+....-.-++.|++.|+.|||+.| |+||||||+||||..+ ..+||+||
T Consensus 250 s~YmVlE~v~GGeLfd~vv~nk---~l~ed~~K~~f~Qll~avkYLH~~G---I~HRDiKPeNILl~~~~e~~llKItDF 323 (475)
T KOG0615|consen 250 SSYMVLEYVEGGELFDKVVANK---YLREDLGKLLFKQLLTAVKYLHSQG---IIHRDIKPENILLSNDAEDCLLKITDF 323 (475)
T ss_pred ceEEEEEEecCccHHHHHHhcc---ccccchhHHHHHHHHHHHHHHHHcC---cccccCCcceEEeccCCcceEEEeccc
Confidence 5799999999999999998765 3445666789999999999999998 9999999999999766 78999999
Q ss_pred cceeeccCCCCcCCCccccCCCCCCCCCCCccccccCCC---CcchhHHhHHHHHHHHHhCCCCCCC--hh-HHHHHhhc
Q 003703 599 GICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVL---TPKSDSYSFGLIILQLLTGRLPVGL--AG-EVRRAVSC 672 (801)
Q Consensus 599 Gla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~---s~ksDVwSlGvvL~ELltG~~Pf~~--~~-~~~~~~~~ 672 (801)
|+|+...... ...+.+|||.|.|||++.+..+ ..++|+||+|||||-+|+|.+||.. .+ ...+.+..
T Consensus 324 GlAK~~g~~s-------fm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~ 396 (475)
T KOG0615|consen 324 GLAKVSGEGS-------FMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILK 396 (475)
T ss_pred chhhccccce-------ehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhc
Confidence 9999886443 4578899999999999987653 3488999999999999999999973 22 25667777
Q ss_pred CccccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 673 GKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 673 g~~~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
|++... ...| ...+++..+|+.+||..||++||+..+.+
T Consensus 397 G~y~f~----p~~w-~~Iseea~dlI~~mL~VdP~~R~s~~eaL 435 (475)
T KOG0615|consen 397 GRYAFG----PLQW-DRISEEALDLINWMLVVDPENRPSADEAL 435 (475)
T ss_pred Cccccc----Chhh-hhhhHHHHHHHHHhhEeCcccCcCHHHHh
Confidence 766432 1122 34788999999999999999999998544
No 7
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.8e-44 Score=360.40 Aligned_cols=254 Identities=24% Similarity=0.353 Sum_probs=209.3
Q ss_pred CccccceeeecCceEEEEEEE--CCeEEEEEEeccCCcc--cHHHHHHHHHHHhcCCCCceeeEec-cccC---Ccceee
Q 003703 456 NFSESFKVGQGGFGCVYKGEM--LGRTVAIKMLYSHNMQ--GQLEFQQEVRVLSKLQHPHLVTLLG-ACPE---AWSLVY 527 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~--~g~~vAiK~l~~~~~~--~~~~f~~E~~il~~l~HpnIV~l~g-~~~~---~~~LV~ 527 (801)
+|.+.++||.|+||+||+++. +|..||.|.++...+. .......|+.+|++|+|||||++|+ .+.+ -.+|||
T Consensus 20 ~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivm 99 (375)
T KOG0591|consen 20 DYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVM 99 (375)
T ss_pred HHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHH
Confidence 355556799999999999976 4999999999866553 3346889999999999999999998 4432 278999
Q ss_pred ecCCCCchhhhhhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-ceeeCCCCCCCeeecCCCCeeeecccceeecc
Q 003703 528 EYLPNGSLQDRLFRKS-NVSPLLWKDRARIAAEIASGLCFLHSSKPE-KIVHGDLKPQNILLDSELSSKICDFGICRLVT 605 (801)
Q Consensus 528 E~~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~aL~yLH~~~~~-~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~ 605 (801)
|||..|+|...+.... ....++.+.+++++.|++.||..+|+.-|. .|+||||||.||+|+.+|.|||+||||++.+.
T Consensus 100 E~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~ 179 (375)
T KOG0591|consen 100 ELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLS 179 (375)
T ss_pred HhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhc
Confidence 9999999999887542 345689999999999999999999995432 39999999999999999999999999999987
Q ss_pred CCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChh--HHHHHhhcCccccccCCCC
Q 003703 606 EDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAG--EVRRAVSCGKLSSILDPLA 683 (801)
Q Consensus 606 ~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~--~~~~~~~~g~~~~~~d~~~ 683 (801)
.... ...+.+|||.||+||.+...+|+.||||||+||++|||+.-++||...+ .....+..|.+..+
T Consensus 180 s~~t------fA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~~~~----- 248 (375)
T KOG0591|consen 180 SKTT------FAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDYPPL----- 248 (375)
T ss_pred chhH------HHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCCCCC-----
Confidence 6543 3567899999999999999999999999999999999999999997543 23444555544322
Q ss_pred CCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHH
Q 003703 684 GDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQ 722 (801)
Q Consensus 684 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~ 722 (801)
+...++..+..|+..|+..||..||+....|.+....
T Consensus 249 --p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~~ 285 (375)
T KOG0591|consen 249 --PDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQSE 285 (375)
T ss_pred --cHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHHH
Confidence 2256889999999999999999999966455544443
No 8
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-43 Score=370.07 Aligned_cols=237 Identities=29% Similarity=0.392 Sum_probs=202.6
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcc---cHHHHHHHHHHHhcCCCCceeeEeccccC--Ccceee
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ---GQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVY 527 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~---~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~ 527 (801)
++|...+.||+|+||.||.++.. ++.+|+|++++.... ......+|..||.+++||.||+|+..|++ .+|||+
T Consensus 25 ~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylVl 104 (357)
T KOG0598|consen 25 DDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLVL 104 (357)
T ss_pred hheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEEE
Confidence 57888999999999999999764 899999999877553 34568899999999999999999999954 589999
Q ss_pred ecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCC
Q 003703 528 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 607 (801)
Q Consensus 528 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~ 607 (801)
+|+.||.|..+|.+.+ .++...+..++.+|+.||.|||+.+ ||||||||+|||||.+|+++|+|||||+..-..
T Consensus 105 d~~~GGeLf~hL~~eg---~F~E~~arfYlaEi~lAL~~LH~~g---IiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~ 178 (357)
T KOG0598|consen 105 DYLNGGELFYHLQREG---RFSEDRARFYLAEIVLALGYLHSKG---IIYRDLKPENILLDEQGHIKLTDFGLCKEDLKD 178 (357)
T ss_pred eccCCccHHHHHHhcC---CcchhHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHeeecCCCcEEEeccccchhcccC
Confidence 9999999999998765 5777888889999999999999988 999999999999999999999999999965443
Q ss_pred CCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChh--HHHHHhhcCccccccCCCCCC
Q 003703 608 TLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAG--EVRRAVSCGKLSSILDPLAGD 685 (801)
Q Consensus 608 ~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~--~~~~~~~~g~~~~~~d~~~~~ 685 (801)
.. .+.+.+||+.|||||++.+.+|+..+|||||||++|||++|.+||...+ .+.+.+..+++ ..
T Consensus 179 ~~------~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~--------~~ 244 (357)
T KOG0598|consen 179 GD------ATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKL--------PL 244 (357)
T ss_pred CC------ccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcC--------CC
Confidence 32 3456799999999999999999999999999999999999999997443 34455555542 22
Q ss_pred CCHHHHHHHHHHHHHhhhhCCCCCCC
Q 003703 686 WPTFVARRLVDLGLQCCELYGRERPD 711 (801)
Q Consensus 686 ~~~~~~~~l~~Li~~Cl~~dP~~RPt 711 (801)
.|...+....+|+...+..||.+|--
T Consensus 245 ~p~~ls~~ardll~~LL~rdp~~RLg 270 (357)
T KOG0598|consen 245 PPGYLSEEARDLLKKLLKRDPRQRLG 270 (357)
T ss_pred CCccCCHHHHHHHHHHhccCHHHhcC
Confidence 34446678899999999999999963
No 9
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-43 Score=370.17 Aligned_cols=247 Identities=30% Similarity=0.430 Sum_probs=201.4
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCC--cccHHHHHHHHHHHhcCCCCceeeEecccc--CCcceeee
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHN--MQGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYE 528 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~--~~~~~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~LV~E 528 (801)
.+|.....||.|+||+||+|++. +..||||.+.... ...++-+..|+.+|+.++|||||.|++++. +..+||||
T Consensus 10 ~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVME 89 (429)
T KOG0595|consen 10 GDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVME 89 (429)
T ss_pred ccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEE
Confidence 46777788999999999999986 8999999997763 344556789999999999999999999984 46889999
Q ss_pred cCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCC------CCeeeeccccee
Q 003703 529 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSE------LSSKICDFGICR 602 (801)
Q Consensus 529 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~------~~vKL~DFGla~ 602 (801)
||.||+|.++|..++ .++......++.|+|.||.+||+++ ||||||||+||||+.. -.+||+|||+|+
T Consensus 90 yC~gGDLs~yi~~~~---~l~e~t~r~Fm~QLA~alq~L~~~~---IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR 163 (429)
T KOG0595|consen 90 YCNGGDLSDYIRRRG---RLPEATARHFMQQLASALQFLHENN---IIHRDLKPQNILLSTTARNDTSPVLKIADFGFAR 163 (429)
T ss_pred eCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCcceEEeccCCCCCCCceEEecccchhh
Confidence 999999999998875 5788999999999999999999988 9999999999999765 458999999999
Q ss_pred eccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChh--HHHHHhhcCccccccC
Q 003703 603 LVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAG--EVRRAVSCGKLSSILD 680 (801)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~--~~~~~~~~g~~~~~~d 680 (801)
.+.+.. ...+.+|+|-|||||++..++|+.|+|+||+|+|||+|++|++||.... +....++.|+-.
T Consensus 164 ~L~~~~-------~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~---- 232 (429)
T KOG0595|consen 164 FLQPGS-------MAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEI---- 232 (429)
T ss_pred hCCchh-------HHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccc----
Confidence 987554 3457789999999999999999999999999999999999999997433 333333333211
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHH
Q 003703 681 PLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKEL 720 (801)
Q Consensus 681 ~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L 720 (801)
....+...+..+.+|....+..+|.+|-+..+-+.+.+
T Consensus 233 --~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~~ 270 (429)
T KOG0595|consen 233 --VPVLPAELSNPLRELLISLLQRNPKDRISFEDFFDHPF 270 (429)
T ss_pred --cCchhhhccCchhhhhhHHHhcCccccCchHHhhhhhh
Confidence 11233334445667777788888888877765444443
No 10
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-43 Score=382.72 Aligned_cols=248 Identities=33% Similarity=0.516 Sum_probs=208.7
Q ss_pred ccceeeecCceEEEEEEECCe-EEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccccC--CcceeeecCCCCch
Q 003703 459 ESFKVGQGGFGCVYKGEMLGR-TVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYLPNGSL 535 (801)
Q Consensus 459 ~~~~LG~G~fG~Vy~g~~~g~-~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E~~~~gsL 535 (801)
..+.||+|-||.||.|.++|. .||+|.++...+. ...|.+|+.+|.+|+|+|||+|||+|.. ..+||||||+.|+|
T Consensus 210 l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~-~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~GsL 288 (468)
T KOG0197|consen 210 LIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMS-PEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGSL 288 (468)
T ss_pred HHHHhcCCccceEEEEEEcCCCcccceEEeccccC-hhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCcH
Confidence 345699999999999999976 9999999876444 3478899999999999999999999955 37999999999999
Q ss_pred hhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCCCcc
Q 003703 536 QDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFH 615 (801)
Q Consensus 536 ~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~~~~ 615 (801)
.++|... ....+.....+.++.|||.|++||++++ +|||||.+.||||++++.+||+|||||+...++...
T Consensus 289 l~yLr~~-~~~~l~~~~Ll~~a~qIaeGM~YLes~~---~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~----- 359 (468)
T KOG0197|consen 289 LDYLRTR-EGGLLNLPQLLDFAAQIAEGMAYLESKN---YIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYT----- 359 (468)
T ss_pred HHHhhhc-CCCccchHHHHHHHHHHHHHHHHHHhCC---ccchhhhhhheeeccCceEEEcccccccccCCCcee-----
Confidence 9999873 3356888999999999999999999988 999999999999999999999999999965544321
Q ss_pred ccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChh--HHHHHhhcCccccccCCCCCCCCHHHHH
Q 003703 616 RSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAG--EVRRAVSCGKLSSILDPLAGDWPTFVAR 692 (801)
Q Consensus 616 ~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~--~~~~~~~~g~~~~~~d~~~~~~~~~~~~ 692 (801)
......-..-|.|||.+..+.++.|||||||||+||||+| |+.||.... .+...+..|... ..|..++.
T Consensus 360 ~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyRl--------p~P~~CP~ 431 (468)
T KOG0197|consen 360 ASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYRL--------PRPEGCPD 431 (468)
T ss_pred ecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCcC--------CCCCCCCH
Confidence 2233334557999999999999999999999999999999 999987433 455666666432 34556778
Q ss_pred HHHHHHHHhhhhCCCCCCCchHHHHHHHHHhhh
Q 003703 693 RLVDLGLQCCELYGRERPDITPSLVKELEQLHV 725 (801)
Q Consensus 693 ~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~l~~ 725 (801)
.+.+|+..||+.+|++|||+. .+...|+.+..
T Consensus 432 ~vY~lM~~CW~~~P~~RPtF~-~L~~~l~~~~~ 463 (468)
T KOG0197|consen 432 EVYELMKSCWHEDPEDRPTFE-TLREVLEDFFT 463 (468)
T ss_pred HHHHHHHHHhhCCcccCCCHH-HHHHHHHHhhh
Confidence 999999999999999999998 78777776643
No 11
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=4e-41 Score=341.39 Aligned_cols=230 Identities=29% Similarity=0.411 Sum_probs=201.8
Q ss_pred CccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccceeee
Q 003703 456 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYE 528 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~---~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E 528 (801)
+|.....||.|+||.|.+++.. |..+|+|++.+... .......+|..+|..+.||++++|++.|.+ ..+||||
T Consensus 45 dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvme 124 (355)
T KOG0616|consen 45 DFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVME 124 (355)
T ss_pred hhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEEe
Confidence 4566678999999999999886 88999999987654 334457899999999999999999999865 5789999
Q ss_pred cCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCC
Q 003703 529 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDT 608 (801)
Q Consensus 529 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~ 608 (801)
|++||.|..+|.+.+ .|+.+.+..++.+|+.||+|||+.+ |++|||||+|||||.+|++||+|||+|+.+...
T Consensus 125 yv~GGElFS~Lrk~~---rF~e~~arFYAAeivlAleylH~~~---iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~r- 197 (355)
T KOG0616|consen 125 YVPGGELFSYLRKSG---RFSEPHARFYAAEIVLALEYLHSLD---IIYRDLKPENLLLDQNGHIKITDFGFAKRVSGR- 197 (355)
T ss_pred ccCCccHHHHHHhcC---CCCchhHHHHHHHHHHHHHHHHhcC---eeeccCChHHeeeccCCcEEEEeccceEEecCc-
Confidence 999999999998765 5778999999999999999999988 999999999999999999999999999998643
Q ss_pred CcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhH--HHHHhhcCccccccCCCCCCC
Q 003703 609 LYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILDPLAGDW 686 (801)
Q Consensus 609 ~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~--~~~~~~~g~~~~~~d~~~~~~ 686 (801)
+.+.+|||.|+|||++...+|+.++|+|||||++|||+.|.+||..... +.+.+..|++ .+
T Consensus 198 --------T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v---------~f 260 (355)
T KOG0616|consen 198 --------TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKV---------KF 260 (355)
T ss_pred --------EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcc---------cC
Confidence 4567899999999999999999999999999999999999999975443 4455555544 56
Q ss_pred CHHHHHHHHHHHHHhhhhCCCCC
Q 003703 687 PTFVARRLVDLGLQCCELYGRER 709 (801)
Q Consensus 687 ~~~~~~~l~~Li~~Cl~~dP~~R 709 (801)
|...+..+.+|+...++.|-..|
T Consensus 261 P~~fs~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 261 PSYFSSDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred CcccCHHHHHHHHHHHhhhhHhh
Confidence 77788899999999999998888
No 12
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-41 Score=366.77 Aligned_cols=247 Identities=29% Similarity=0.382 Sum_probs=205.1
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcC-CCCceeeEeccccC--Cccee
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKL-QHPHLVTLLGACPE--AWSLV 526 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~---~~~~~f~~E~~il~~l-~HpnIV~l~g~~~~--~~~LV 526 (801)
++|..++.||.|+|++||+++.. ++.||||++.+... .....+..|-.+|.+| .||.||+||..|.+ .+|+|
T Consensus 73 ~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFv 152 (604)
T KOG0592|consen 73 NDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFV 152 (604)
T ss_pred hhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEE
Confidence 57888889999999999999875 89999999976543 2233577899999999 89999999999965 48999
Q ss_pred eecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccC
Q 003703 527 YEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTE 606 (801)
Q Consensus 527 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~ 606 (801)
+||++||+|.++|.+.+ .|+......++.+|+.||+|||+.| ||||||||+|||||.+|++||+|||.|+.++.
T Consensus 153 Le~A~nGdll~~i~K~G---sfde~caR~YAAeIldAleylH~~G---IIHRDlKPENILLd~dmhikITDFGsAK~l~~ 226 (604)
T KOG0592|consen 153 LEYAPNGDLLDLIKKYG---SFDETCARFYAAEILDALEYLHSNG---IIHRDLKPENILLDKDGHIKITDFGSAKILSP 226 (604)
T ss_pred EEecCCCcHHHHHHHhC---cchHHHHHHHHHHHHHHHHHHHhcC---ceeccCChhheeEcCCCcEEEeeccccccCCh
Confidence 99999999999998775 5777888899999999999999998 99999999999999999999999999999875
Q ss_pred CCCc-----CC--CccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhhcCcccccc
Q 003703 607 DTLY-----LP--SFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSIL 679 (801)
Q Consensus 607 ~~~~-----~~--~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~g~~~~~~ 679 (801)
.... .+ .......++||..|++||++..+..++.+|+|+||||||+|+.|++||...++..-. .++..
T Consensus 227 ~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliF---qkI~~-- 301 (604)
T KOG0592|consen 227 SQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIF---QKIQA-- 301 (604)
T ss_pred hhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHH---HHHHH--
Confidence 4322 11 111125689999999999999999999999999999999999999999866542111 11111
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchH
Q 003703 680 DPLAGDWPTFVARRLVDLGLQCCELYGRERPDITP 714 (801)
Q Consensus 680 d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e 714 (801)
..-.||...++.+.+|+.+.|..||.+|++..+
T Consensus 302 --l~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~q 334 (604)
T KOG0592|consen 302 --LDYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQ 334 (604)
T ss_pred --hcccCCCCCCHHHHHHHHHHHccCccccccHHH
Confidence 123456666678899999999999999999864
No 13
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-40 Score=353.38 Aligned_cols=255 Identities=29% Similarity=0.464 Sum_probs=206.2
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccc--cC--Ccceeee
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGAC--PE--AWSLVYE 528 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~--~~--~~~LV~E 528 (801)
.++...+.||+|+||.||++... |..+|||............+.+|+.+|.+++|||||+++|.. .+ .++++||
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE 96 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME 96 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence 45666778999999999999886 799999998665333355688999999999999999999963 34 3789999
Q ss_pred cCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecC-CCCeeeecccceeeccCC
Q 003703 529 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDS-ELSSKICDFGICRLVTED 607 (801)
Q Consensus 529 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~-~~~vKL~DFGla~~~~~~ 607 (801)
|+++|||.+++.+.+. .|+...+..+..||+.||.|||+++ ||||||||+||||+. ++.+||+|||+++.....
T Consensus 97 y~~~GsL~~~~~~~g~--~l~E~~v~~ytr~iL~GL~ylHs~g---~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~ 171 (313)
T KOG0198|consen 97 YAPGGSLSDLIKRYGG--KLPEPLVRRYTRQILEGLAYLHSKG---IVHCDIKPANILLDPSNGDVKLADFGLAKKLESK 171 (313)
T ss_pred ccCCCcHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHhCC---EeccCcccceEEEeCCCCeEEeccCccccccccc
Confidence 9999999999987764 6899999999999999999999988 999999999999999 799999999999877631
Q ss_pred CCcCCCccccCCCCCCCCCCCccccccCC-CCcchhHHhHHHHHHHHHhCCCCCCC-hhHHHHHhhcCccccccCCCCCC
Q 003703 608 TLYLPSFHRSTAPKGSFPYADPEYHRTGV-LTPKSDSYSFGLIILQLLTGRLPVGL-AGEVRRAVSCGKLSSILDPLAGD 685 (801)
Q Consensus 608 ~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~-~s~ksDVwSlGvvL~ELltG~~Pf~~-~~~~~~~~~~g~~~~~~d~~~~~ 685 (801)
.. .........||+.|||||++..+. ..+++|||||||+++||+||++||.. .......+..|.-. ..+.
T Consensus 172 ~~---~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~-----~~P~ 243 (313)
T KOG0198|consen 172 GT---KSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGRED-----SLPE 243 (313)
T ss_pred cc---cccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccC-----CCCC
Confidence 11 112245678999999999998643 34599999999999999999999975 22222222222111 1235
Q ss_pred CCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHH
Q 003703 686 WPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQ 722 (801)
Q Consensus 686 ~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~ 722 (801)
+|...+....+++.+|+..+|..|||+.+.+.+.+..
T Consensus 244 ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~ 280 (313)
T KOG0198|consen 244 IPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLK 280 (313)
T ss_pred CCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhh
Confidence 6777888999999999999999999999776666554
No 14
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=2.3e-39 Score=347.95 Aligned_cols=254 Identities=18% Similarity=0.260 Sum_probs=205.6
Q ss_pred cccCHHHHHHHhcCccccceeeecCceEEEEEEECCeEEEEEEeccCCccc---HHHHHHHHHHHhcCCCCceeeEeccc
Q 003703 443 AEFSLADLQTATCNFSESFKVGQGGFGCVYKGEMLGRTVAIKMLYSHNMQG---QLEFQQEVRVLSKLQHPHLVTLLGAC 519 (801)
Q Consensus 443 ~~~~~~el~~at~~f~~~~~LG~G~fG~Vy~g~~~g~~vAiK~l~~~~~~~---~~~f~~E~~il~~l~HpnIV~l~g~~ 519 (801)
..++..++ ++.....||+|++|.||+|.++|+.||||++....... ...|.+|+.+|.+++|||||+++|+|
T Consensus 13 ~~i~~~~i-----~~~~~~~i~~g~~~~v~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~ 87 (283)
T PHA02988 13 KCIESDDI-----DKYTSVLIKENDQNSIYKGIFNNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFI 87 (283)
T ss_pred eecCHHHc-----CCCCCeEEeeCCceEEEEEEECCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeE
Confidence 34556666 33334679999999999999999999999997654433 35688999999999999999999988
Q ss_pred cC------CcceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCceeeCCCCCCCeeecCCCC
Q 003703 520 PE------AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSS-KPEKIVHGDLKPQNILLDSELS 592 (801)
Q Consensus 520 ~~------~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~-~~~~iiHrDIKp~NILLd~~~~ 592 (801)
.+ ..++||||+++|+|.+++... ..++|...+.++.+++.||.|||.. + ++||||||+|||++.++.
T Consensus 88 ~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~---~~Hrdlkp~nill~~~~~ 161 (283)
T PHA02988 88 IDIVDDLPRLSLILEYCTRGYLREVLDKE---KDLSFKTKLDMAIDCCKGLYNLYKYTN---KPYKNLTSVSFLVTENYK 161 (283)
T ss_pred EecccCCCceEEEEEeCCCCcHHHHHhhC---CCCChhHHHHHHHHHHHHHHHHHhcCC---CCCCcCChhhEEECCCCc
Confidence 44 357999999999999999754 3588999999999999999999985 5 789999999999999999
Q ss_pred eeeecccceeeccCCCCcCCCccccCCCCCCCCCCCcccccc--CCCCcchhHHhHHHHHHHHHhCCCCCCChh--HHHH
Q 003703 593 SKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT--GVLTPKSDSYSFGLIILQLLTGRLPVGLAG--EVRR 668 (801)
Q Consensus 593 vKL~DFGla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~--~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~--~~~~ 668 (801)
+||+|||+++.+.... ....||+.|+|||++.+ ..++.++|||||||++|||+||+.||.... .+..
T Consensus 162 ~kl~dfg~~~~~~~~~---------~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~ 232 (283)
T PHA02988 162 LKIICHGLEKILSSPP---------FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYD 232 (283)
T ss_pred EEEcccchHhhhcccc---------ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHH
Confidence 9999999998654321 23468999999999876 689999999999999999999999997543 2223
Q ss_pred HhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHHhh
Q 003703 669 AVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLH 724 (801)
Q Consensus 669 ~~~~g~~~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~l~ 724 (801)
.+..+... ...+...+..+.+|+.+||+.||.+|||+. ++++.|+.+.
T Consensus 233 ~i~~~~~~-------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~-ell~~l~~~~ 280 (283)
T PHA02988 233 LIINKNNS-------LKLPLDCPLEIKCIVEACTSHDSIKRPNIK-EILYNLSLYK 280 (283)
T ss_pred HHHhcCCC-------CCCCCcCcHHHHHHHHHHhcCCcccCcCHH-HHHHHHHHHH
Confidence 33222111 112223566899999999999999999999 7888888764
No 15
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=7.6e-40 Score=360.24 Aligned_cols=255 Identities=29% Similarity=0.455 Sum_probs=203.0
Q ss_pred hcCccccceeeecCceEEEEEEEC-------CeEEEEEEeccCCc-ccHHHHHHHHHHHhcC-CCCceeeEeccccC---
Q 003703 454 TCNFSESFKVGQGGFGCVYKGEML-------GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKL-QHPHLVTLLGACPE--- 521 (801)
Q Consensus 454 t~~f~~~~~LG~G~fG~Vy~g~~~-------g~~vAiK~l~~~~~-~~~~~f~~E~~il~~l-~HpnIV~l~g~~~~--- 521 (801)
.++|...++||+|+||.||+|.+. +..||+|++..... .....+.+|+.+|..+ +|||||+++|+|..
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNG 85 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCC
Confidence 457888889999999999999752 46799999875433 2335688999999999 89999999998853
Q ss_pred CcceeeecCCCCchhhhhhhcCC---------------------------------------------------------
Q 003703 522 AWSLVYEYLPNGSLQDRLFRKSN--------------------------------------------------------- 544 (801)
Q Consensus 522 ~~~LV~E~~~~gsL~~~L~~~~~--------------------------------------------------------- 544 (801)
..++||||+++|+|.+++.....
T Consensus 86 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (338)
T cd05102 86 PLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDD 165 (338)
T ss_pred ceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccc
Confidence 36789999999999998865321
Q ss_pred --CCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCCCccccCCCCC
Q 003703 545 --VSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKG 622 (801)
Q Consensus 545 --~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~G 622 (801)
..++++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++........ .......+
T Consensus 166 ~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~----~~~~~~~~ 238 (338)
T cd05102 166 LWKSPLTMEDLICYSFQVARGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY----VRKGSARL 238 (338)
T ss_pred cccCCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCccceEEEcCCCcEEEeecccccccccCcch----hcccCCCC
Confidence 135888999999999999999999987 999999999999999999999999999876433211 12234456
Q ss_pred CCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChh---HHHHHhhcCccccccCCCCCCCCHHHHHHHHHHH
Q 003703 623 SFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAG---EVRRAVSCGKLSSILDPLAGDWPTFVARRLVDLG 698 (801)
Q Consensus 623 t~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~---~~~~~~~~g~~~~~~d~~~~~~~~~~~~~l~~Li 698 (801)
++.|+|||++.+..++.++|||||||+||||++ |..||.... .....+..+... ..+...+..+.+|+
T Consensus 239 ~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~l~~li 310 (338)
T cd05102 239 PLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRM--------RAPENATPEIYRIM 310 (338)
T ss_pred CccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCC--------CCCCCCCHHHHHHH
Confidence 789999999999999999999999999999997 999997432 222223333211 11233456789999
Q ss_pred HHhhhhCCCCCCCchHHHHHHHHHhh
Q 003703 699 LQCCELYGRERPDITPSLVKELEQLH 724 (801)
Q Consensus 699 ~~Cl~~dP~~RPt~~e~l~~~L~~l~ 724 (801)
.+||+.||.+||++. ++++.|+.+.
T Consensus 311 ~~cl~~dp~~RPs~~-el~~~l~~~~ 335 (338)
T cd05102 311 LACWQGDPKERPTFS-ALVEILGDLL 335 (338)
T ss_pred HHHccCChhhCcCHH-HHHHHHHHHH
Confidence 999999999999998 7888888653
No 16
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.5e-40 Score=358.11 Aligned_cols=245 Identities=27% Similarity=0.423 Sum_probs=208.3
Q ss_pred ccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccc--cCCcceeeecCCC
Q 003703 457 FSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGAC--PEAWSLVYEYLPN 532 (801)
Q Consensus 457 f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~--~~~~~LV~E~~~~ 532 (801)
|..-.+||+|+.|.||.+... +..||||++.........-+.+|+.+|+..+|+|||.++..| .+.+++|||||+|
T Consensus 275 y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~g 354 (550)
T KOG0578|consen 275 YTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYMEG 354 (550)
T ss_pred hcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecCC
Confidence 444557999999999999764 788999999877666666688999999999999999999887 4568899999999
Q ss_pred CchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCC
Q 003703 533 GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLP 612 (801)
Q Consensus 533 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~ 612 (801)
|+|.|.+... .++..++..|+.+++.||.|||..+ |||||||.+||||+.+|.+||+|||+|..+.....
T Consensus 355 gsLTDvVt~~----~~~E~qIA~Icre~l~aL~fLH~~g---IiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~--- 424 (550)
T KOG0578|consen 355 GSLTDVVTKT----RMTEGQIAAICREILQGLKFLHARG---IIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS--- 424 (550)
T ss_pred Cchhhhhhcc----cccHHHHHHHHHHHHHHHHHHHhcc---eeeeccccceeEeccCCcEEEeeeeeeeccccccC---
Confidence 9999988553 4888999999999999999999998 99999999999999999999999999998865542
Q ss_pred CccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHh---hcCccccccCCCCCCCCHH
Q 003703 613 SFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAV---SCGKLSSILDPLAGDWPTF 689 (801)
Q Consensus 613 ~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~---~~g~~~~~~d~~~~~~~~~ 689 (801)
.....+|||.|||||+.....|++|.||||||+|++||+-|.+||-....++.++ ..|. .+ -..+..
T Consensus 425 ---KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~-P~------lk~~~k 494 (550)
T KOG0578|consen 425 ---KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGT-PK------LKNPEK 494 (550)
T ss_pred ---ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCC-CC------cCCccc
Confidence 4567899999999999999999999999999999999999999996544443322 1221 11 134556
Q ss_pred HHHHHHHHHHHhhhhCCCCCCCchHHHHHHHH
Q 003703 690 VARRLVDLGLQCCELYGRERPDITPSLVKELE 721 (801)
Q Consensus 690 ~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~ 721 (801)
.+..|.+++.+||+.|+.+||++.+.|.+.+-
T Consensus 495 lS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl 526 (550)
T KOG0578|consen 495 LSPELKDFLDRCLVVDVEQRASAKELLEHPFL 526 (550)
T ss_pred cCHHHHHHHHHHhhcchhcCCCHHHHhcChhh
Confidence 78899999999999999999999977766554
No 17
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=5.8e-40 Score=333.32 Aligned_cols=248 Identities=24% Similarity=0.347 Sum_probs=196.1
Q ss_pred CccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEecccc--CCcceeeec
Q 003703 456 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEY 529 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~--~~~~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~LV~E~ 529 (801)
.|....++|+|+||.||++++. |+.||||++..... .-.+-..+|+++|.+++|+|+|.|+.+|. ..++||+||
T Consensus 3 kYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~ 82 (396)
T KOG0593|consen 3 KYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEY 82 (396)
T ss_pred HHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeee
Confidence 4566678999999999999885 99999999975533 22344679999999999999999999994 468999999
Q ss_pred CCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCC
Q 003703 530 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTL 609 (801)
Q Consensus 530 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~ 609 (801)
|+.. +.+.|.+.. ..++...+.+++.|++.|+.|+|+++ +|||||||+||||+.+|.+||||||+|+.+.....
T Consensus 83 ~dhT-vL~eLe~~p--~G~~~~~vk~~l~Q~l~ai~~cHk~n---~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd 156 (396)
T KOG0593|consen 83 CDHT-VLHELERYP--NGVPSELVKKYLYQLLKAIHFCHKNN---CIHRDIKPENILITQNGVVKLCDFGFARTLSAPGD 156 (396)
T ss_pred cchH-HHHHHHhcc--CCCCHHHHHHHHHHHHHHhhhhhhcC---eecccCChhheEEecCCcEEeccchhhHhhcCCcc
Confidence 9664 444454443 34778899999999999999999998 99999999999999999999999999998873221
Q ss_pred cCCCccccCCCCCCCCCCCcccccc-CCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhhc----Cc----------
Q 003703 610 YLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSC----GK---------- 674 (801)
Q Consensus 610 ~~~~~~~~~~~~Gt~~Y~APE~~~~-~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~----g~---------- 674 (801)
..+..+.|-+|.|||.+.+ .+|++.+|||++||++.||++|.+-|.....+.+++.. |+
T Consensus 157 ------~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~ 230 (396)
T KOG0593|consen 157 ------NYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFS 230 (396)
T ss_pred ------hhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhc
Confidence 2467789999999998877 68999999999999999999999999765554333211 11
Q ss_pred ----cc-----cccCCC--CCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 675 ----LS-----SILDPL--AGDWPTFVARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 675 ----~~-----~~~d~~--~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
+. ++-++. ...+| ..+.-+++|+..|++.||.+|++..+.+
T Consensus 231 ~N~~F~Gv~lP~~~~~epLe~k~p-~~s~~~ld~~k~cL~~dP~~R~sc~qll 282 (396)
T KOG0593|consen 231 SNPFFHGVRLPEPEHPEPLERKYP-KISNVLLDLLKKCLKMDPDDRLSCEQLL 282 (396)
T ss_pred cCCceeeeecCCCCCccchhhhcc-cchHHHHHHHHHHhcCCccccccHHHHh
Confidence 11 111111 11222 2455789999999999999999998644
No 18
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-39 Score=357.46 Aligned_cols=261 Identities=30% Similarity=0.505 Sum_probs=204.4
Q ss_pred HHHHHHhcCccccceeeecCceEEEEEEECCeEEEEEEeccCCccc--HHHHHHHHHHHhcCCCCceeeEeccccC-Ccc
Q 003703 448 ADLQTATCNFSESFKVGQGGFGCVYKGEMLGRTVAIKMLYSHNMQG--QLEFQQEVRVLSKLQHPHLVTLLGACPE-AWS 524 (801)
Q Consensus 448 ~el~~at~~f~~~~~LG~G~fG~Vy~g~~~g~~vAiK~l~~~~~~~--~~~f~~E~~il~~l~HpnIV~l~g~~~~-~~~ 524 (801)
.+....-+.+.....||+|.||+||+|.+.| .||||+++...... .+.|++|+.+|++-+|-||+-|+|||-. ...
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG-dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~A 463 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWHG-DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPLA 463 (678)
T ss_pred cccccCHHHhhccceeccccccceeeccccc-ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCcee
Confidence 3444444455566789999999999999988 58999998775533 3569999999999999999999999943 468
Q ss_pred eeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeec
Q 003703 525 LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLV 604 (801)
Q Consensus 525 LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~ 604 (801)
+|..+|.|-+|+.+|+-.. ..|.....+.|+.|||.|+.|||..+ |||||||..||+|++++.|||+||||+..-
T Consensus 464 IiTqwCeGsSLY~hlHv~e--tkfdm~~~idIAqQiaqGM~YLHAK~---IIHrDLKSnNIFl~~~~kVkIgDFGLatvk 538 (678)
T KOG0193|consen 464 IITQWCEGSSLYTHLHVQE--TKFDMNTTIDIAQQIAQGMDYLHAKN---IIHRDLKSNNIFLHEDLKVKIGDFGLATVK 538 (678)
T ss_pred eeehhccCchhhhhccchh--hhhhHHHHHHHHHHHHHhhhhhhhhh---hhhhhccccceEEccCCcEEEecccceeee
Confidence 9999999999999998665 46888999999999999999999988 999999999999999999999999999764
Q ss_pred cCCCCcCCCccccCCCCCCCCCCCccccc---cCCCCcchhHHhHHHHHHHHHhCCCCCCChh--HHHHHhhcCcccccc
Q 003703 605 TEDTLYLPSFHRSTAPKGSFPYADPEYHR---TGVLTPKSDSYSFGLIILQLLTGRLPVGLAG--EVRRAVSCGKLSSIL 679 (801)
Q Consensus 605 ~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~---~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~--~~~~~~~~g~~~~~~ 679 (801)
.... .........|...|||||++. ..+|++.+||||||||+|||+||..||.... .+.-++..|.+ ..
T Consensus 539 ~~w~----g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l--~p 612 (678)
T KOG0193|consen 539 TRWS----GEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYL--MP 612 (678)
T ss_pred eeec----cccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEeccccc--Cc
Confidence 4321 112234556888999999885 3579999999999999999999999997211 11112222322 11
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHHh
Q 003703 680 DPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 723 (801)
Q Consensus 680 d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~l 723 (801)
|. ..........+.+|+..||..++++||.+. .|+..|+.+
T Consensus 613 d~--s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~-~il~~l~~l 653 (678)
T KOG0193|consen 613 DL--SKIRSNCPKAMKRLLSDCWKFDREERPLFP-QLLSKLEEL 653 (678)
T ss_pred cc--hhhhccCHHHHHHHHHHHHhcCcccCccHH-HHHHHHHHh
Confidence 21 122234556899999999999999999999 455544444
No 19
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=1.9e-39 Score=351.50 Aligned_cols=247 Identities=30% Similarity=0.390 Sum_probs=209.9
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcc--cHHHHHHHHHHHhcCCCCceeeEeccccC--Ccceeee
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ--GQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYE 528 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~--~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E 528 (801)
++|...+.||+|+||.||||+.. .+.||||.+.+.... ....+.+|++|++.++|||||.++.+|.. +.++|.|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 46777788999999999999875 688999999765443 34458899999999999999999999964 5789999
Q ss_pred cCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCC
Q 003703 529 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDT 608 (801)
Q Consensus 529 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~ 608 (801)
|+.| +|..+|.... .++.+.+..|+.+++.||.|||+++ |+|||+||.||||+.+|++|+||||+|+.+..+.
T Consensus 82 ~a~g-~L~~il~~d~---~lpEe~v~~~a~~LVsaL~yLhs~r---ilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t 154 (808)
T KOG0597|consen 82 YAVG-DLFTILEQDG---KLPEEQVRAIAYDLVSALYYLHSNR---ILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNT 154 (808)
T ss_pred hhhh-hHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHhcC---cccccCCcceeeecCCCceeechhhhhhhcccCc
Confidence 9976 9999997654 5888999999999999999999988 9999999999999999999999999999887654
Q ss_pred CcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhhcCccccccCCCCCCCCH
Q 003703 609 LYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPT 688 (801)
Q Consensus 609 ~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~g~~~~~~d~~~~~~~~ 688 (801)
. ..+...|||.|||||+..++.|+..+|.||+|||+|||.+|++||- ...+..++.. +-.....||.
T Consensus 155 ~------vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~-a~si~~Lv~~------I~~d~v~~p~ 221 (808)
T KOG0597|consen 155 S------VLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFY-ARSITQLVKS------ILKDPVKPPS 221 (808)
T ss_pred e------eeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCch-HHHHHHHHHH------HhcCCCCCcc
Confidence 2 3567889999999999999999999999999999999999999995 2333333221 1111235788
Q ss_pred HHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHH
Q 003703 689 FVARRLVDLGLQCCELYGRERPDITPSLVKELE 721 (801)
Q Consensus 689 ~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~ 721 (801)
..+..+..++...+.+||..|.+..+.+-+.+-
T Consensus 222 ~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~ 254 (808)
T KOG0597|consen 222 TASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFW 254 (808)
T ss_pred cccHHHHHHHHHHhhcChhhcccHHHHhcChHH
Confidence 899999999999999999999999977766663
No 20
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4e-39 Score=358.98 Aligned_cols=238 Identities=26% Similarity=0.383 Sum_probs=202.1
Q ss_pred HhcCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcC-CCCceeeEecccc--CCcc
Q 003703 453 ATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKL-QHPHLVTLLGACP--EAWS 524 (801)
Q Consensus 453 at~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~---~~~~~f~~E~~il~~l-~HpnIV~l~g~~~--~~~~ 524 (801)
.-++|....+||+|+||.|+++.+. ++.+|||++++... .+......|..|+... +||.++.|+.+|+ +..+
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~ 445 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLF 445 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEE
Confidence 3467899999999999999999886 68999999998865 3344577888888877 5999999999995 4689
Q ss_pred eeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeec
Q 003703 525 LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLV 604 (801)
Q Consensus 525 LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~ 604 (801)
+||||+.||++..+.+. ..|+...+..++..|+.||.|||+++ ||+||||.+|||||.+|++||+|||+|+..
T Consensus 446 fvmey~~Ggdm~~~~~~----~~F~e~rarfyaAev~l~L~fLH~~~---IIYRDlKLdNiLLD~eGh~kiADFGlcKe~ 518 (694)
T KOG0694|consen 446 FVMEYVAGGDLMHHIHT----DVFSEPRARFYAAEVVLGLQFLHENG---IIYRDLKLDNLLLDTEGHVKIADFGLCKEG 518 (694)
T ss_pred EEEEecCCCcEEEEEec----ccccHHHHHHHHHHHHHHHHHHHhcC---ceeeecchhheEEcccCcEEeccccccccc
Confidence 99999999995544432 45888889999999999999999998 999999999999999999999999999975
Q ss_pred cCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhH--HHHHhhcCccccccCCC
Q 003703 605 TEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILDPL 682 (801)
Q Consensus 605 ~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~--~~~~~~~g~~~~~~d~~ 682 (801)
.... ..+.+.+|||.|||||++.+..|+..+|+|||||+|||||+|..||...++ +...+...
T Consensus 519 m~~g------~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d--------- 583 (694)
T KOG0694|consen 519 MGQG------DRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVND--------- 583 (694)
T ss_pred CCCC------CccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcC---------
Confidence 4222 246788999999999999999999999999999999999999999975443 33333222
Q ss_pred CCCCCHHHHHHHHHHHHHhhhhCCCCCCCc
Q 003703 683 AGDWPTFVARRLVDLGLQCCELYGRERPDI 712 (801)
Q Consensus 683 ~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~ 712 (801)
..-||..++.+.+.++.+++..+|.+|--+
T Consensus 584 ~~~yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 584 EVRYPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred CCCCCCcccHHHHHHHHHHhccCcccccCC
Confidence 124778889999999999999999999887
No 21
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-38 Score=352.72 Aligned_cols=243 Identities=28% Similarity=0.426 Sum_probs=202.4
Q ss_pred HHhcCccccceeeecCceEEEEEEEC--CeEEEEEEeccC----Cc-ccHHHHHHHHHHHhcCC-CCceeeEeccc--cC
Q 003703 452 TATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSH----NM-QGQLEFQQEVRVLSKLQ-HPHLVTLLGAC--PE 521 (801)
Q Consensus 452 ~at~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~----~~-~~~~~f~~E~~il~~l~-HpnIV~l~g~~--~~ 521 (801)
....+|...+.||+|+||.|+.|... |..||+|++... .. .....+.+|+.+++.++ ||||++++.++ ..
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 34567888999999999999999774 899999977654 11 23345678999999998 99999999988 44
Q ss_pred CcceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCC-CCeeeecccc
Q 003703 522 AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSE-LSSKICDFGI 600 (801)
Q Consensus 522 ~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~-~~vKL~DFGl 600 (801)
..++||||+.||+|.+++... ..+.......++.|++.|+.|||+.+ |+||||||+|||||.+ +++||+|||+
T Consensus 94 ~~~ivmEy~~gGdL~~~i~~~---g~l~E~~ar~~F~Qlisav~y~H~~g---i~HRDLK~ENilld~~~~~~Kl~DFG~ 167 (370)
T KOG0583|consen 94 KIYIVMEYCSGGDLFDYIVNK---GRLKEDEARKYFRQLISAVAYCHSRG---IVHRDLKPENILLDGNEGNLKLSDFGL 167 (370)
T ss_pred eEEEEEEecCCccHHHHHHHc---CCCChHHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEecCCCCCEEEecccc
Confidence 689999999999999999874 35777899999999999999999988 9999999999999999 9999999999
Q ss_pred eeecc-CCCCcCCCccccCCCCCCCCCCCccccccCC-CC-cchhHHhHHHHHHHHHhCCCCCCChhH--HHHHhhcCcc
Q 003703 601 CRLVT-EDTLYLPSFHRSTAPKGSFPYADPEYHRTGV-LT-PKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKL 675 (801)
Q Consensus 601 a~~~~-~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~-~s-~ksDVwSlGvvL~ELltG~~Pf~~~~~--~~~~~~~g~~ 675 (801)
+.... .+. .....+||+.|+|||++.+.. |+ .++||||+||+||-|++|+.||..... +...+..+.+
T Consensus 168 s~~~~~~~~-------~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~ 240 (370)
T KOG0583|consen 168 SAISPGEDG-------LLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEF 240 (370)
T ss_pred ccccCCCCC-------cccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCc
Confidence 99873 222 346789999999999999877 86 789999999999999999999986332 2222333322
Q ss_pred ccccCCCCCCCCHHH-HHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 676 SSILDPLAGDWPTFV-ARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 676 ~~~~d~~~~~~~~~~-~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
.+|... +..+..|+.+|+..||..|+++.+.+
T Consensus 241 ---------~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~ 273 (370)
T KOG0583|consen 241 ---------KIPSYLLSPEARSLIEKMLVPDPSTRITLLEIL 273 (370)
T ss_pred ---------cCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHh
Confidence 234434 78999999999999999999998544
No 22
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-40 Score=356.38 Aligned_cols=234 Identities=27% Similarity=0.458 Sum_probs=196.3
Q ss_pred cceeeecCceEEEEEEECCeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccccC--CcceeeecCCCCchhh
Q 003703 460 SFKVGQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYLPNGSLQD 537 (801)
Q Consensus 460 ~~~LG~G~fG~Vy~g~~~g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E~~~~gsL~~ 537 (801)
...||.|+.|.||.|++.++.||||+++.-. ..+++-|++|+||||+.|.|+|.. .+|||||||..|-|..
T Consensus 129 LeWlGSGaQGAVF~Grl~netVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~ 201 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGRLHNETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLYE 201 (904)
T ss_pred hhhhccCcccceeeeeccCceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHHH
Confidence 4579999999999999999999999875321 247888999999999999999965 4789999999999999
Q ss_pred hhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCCCcccc
Q 003703 538 RLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRS 617 (801)
Q Consensus 538 ~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~~~~~~ 617 (801)
+|.... +++......|..+||.|+.|||.++ |||||||.-||||..+..|||+|||.++.+.+.. ..
T Consensus 202 VLka~~---~itp~llv~Wsk~IA~GM~YLH~hK---IIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~S-------Tk 268 (904)
T KOG4721|consen 202 VLKAGR---PITPSLLVDWSKGIAGGMNYLHLHK---IIHRDLKSPNILISYDDVVKISDFGTSKELSDKS-------TK 268 (904)
T ss_pred HHhccC---ccCHHHHHHHHHHhhhhhHHHHHhh---HhhhccCCCceEeeccceEEeccccchHhhhhhh-------hh
Confidence 997654 5666888899999999999999988 9999999999999999999999999999876543 24
Q ss_pred CCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhhcCccccccCCCCCCCCHHHHHHHHHH
Q 003703 618 TAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFVARRLVDL 697 (801)
Q Consensus 618 ~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~g~~~~~~d~~~~~~~~~~~~~l~~L 697 (801)
..++||..|||||++.+.+.+.|+|||||||||||||||..||..++..--.|.-|. ..+ ....|...++.|.-|
T Consensus 269 MSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGs--NsL---~LpvPstcP~GfklL 343 (904)
T KOG4721|consen 269 MSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGS--NSL---HLPVPSTCPDGFKLL 343 (904)
T ss_pred hhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEeccC--Ccc---cccCcccCchHHHHH
Confidence 577899999999999999999999999999999999999999976654322222221 111 123456677789999
Q ss_pred HHHhhhhCCCCCCCchHHHHH
Q 003703 698 GLQCCELYGRERPDITPSLVK 718 (801)
Q Consensus 698 i~~Cl~~dP~~RPt~~e~l~~ 718 (801)
+.+||+..|..||++++.+.+
T Consensus 344 ~Kqcw~sKpRNRPSFrqil~H 364 (904)
T KOG4721|consen 344 LKQCWNSKPRNRPSFRQILLH 364 (904)
T ss_pred HHHHHhcCCCCCccHHHHHHH
Confidence 999999999999999954433
No 23
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-38 Score=337.53 Aligned_cols=261 Identities=21% Similarity=0.277 Sum_probs=208.9
Q ss_pred hcCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcccH-HHHHHHHHHHhcCCCCceeeEeccc--cCCcceeee
Q 003703 454 TCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQ-LEFQQEVRVLSKLQHPHLVTLLGAC--PEAWSLVYE 528 (801)
Q Consensus 454 t~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~~-~~f~~E~~il~~l~HpnIV~l~g~~--~~~~~LV~E 528 (801)
..+|.....||.|..++||+|+.. +..||||++.-+..... ..+.+|+..|+.++|||||+++.+| ...+++||.
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmp 104 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMP 104 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeeh
Confidence 357888889999999999999885 89999999987665544 6788999999999999999999888 456889999
Q ss_pred cCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCC
Q 003703 529 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDT 608 (801)
Q Consensus 529 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~ 608 (801)
||.+||+.+++...-. ..++...+..|..+++.||.|||.+| .||||||+.|||||.+|.|||+|||.+-.+.+..
T Consensus 105 fMa~GS~ldIik~~~~-~Gl~E~~Ia~iLre~LkaL~YLH~~G---~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G 180 (516)
T KOG0582|consen 105 FMAGGSLLDIIKTYYP-DGLEEASIATILREVLKALDYLHQNG---HIHRDVKAGNILIDSDGTVKLADFGVSASLFDSG 180 (516)
T ss_pred hhcCCcHHHHHHHHcc-ccccHHHHHHHHHHHHHHHHHHHhcC---ceecccccccEEEcCCCcEEEcCceeeeeecccC
Confidence 9999999999976543 34888999999999999999999998 9999999999999999999999999887665543
Q ss_pred CcCCCccccCCCCCCCCCCCccccc--cCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHh--hcCccccccCCC-C
Q 003703 609 LYLPSFHRSTAPKGSFPYADPEYHR--TGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAV--SCGKLSSILDPL-A 683 (801)
Q Consensus 609 ~~~~~~~~~~~~~Gt~~Y~APE~~~--~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~--~~g~~~~~~d~~-~ 683 (801)
....... ...+||+.|||||++. ..+|+.|+|||||||+.+||.+|..||.-...+..++ -.|......-.. .
T Consensus 181 -~R~~~rf-~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~ 258 (516)
T KOG0582|consen 181 -DRQVTRF-NTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLD 258 (516)
T ss_pred -ceeeEee-ccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCC
Confidence 1112222 6779999999999853 3579999999999999999999999998555443332 223222211000 1
Q ss_pred CCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHH
Q 003703 684 GDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKEL 720 (801)
Q Consensus 684 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L 720 (801)
.+........+.+++..||..||.+|||..+.+.+.+
T Consensus 259 ~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~F 295 (516)
T KOG0582|consen 259 KDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAF 295 (516)
T ss_pred hHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHH
Confidence 1122235568999999999999999999997665554
No 24
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.7e-39 Score=369.37 Aligned_cols=253 Identities=29% Similarity=0.500 Sum_probs=213.2
Q ss_pred CccccceeeecCceEEEEEEEC-------CeEEEEEEeccCCcc-cHHHHHHHHHHHhcCCCCceeeEeccccC--Ccce
Q 003703 456 NFSESFKVGQGGFGCVYKGEML-------GRTVAIKMLYSHNMQ-GQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSL 525 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~-------g~~vAiK~l~~~~~~-~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~L 525 (801)
+....+.||+|.||.||+|+.. ...||||.++..... .+.+|.+|+++|+.++|||||+|+|.|.+ ..++
T Consensus 487 ~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~M 566 (774)
T KOG1026|consen 487 DIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCM 566 (774)
T ss_pred heeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEE
Confidence 3444556999999999999875 256999999887665 77899999999999999999999999954 4789
Q ss_pred eeecCCCCchhhhhhhcCC-----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCee
Q 003703 526 VYEYLPNGSLQDRLFRKSN-----------VSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSK 594 (801)
Q Consensus 526 V~E~~~~gsL~~~L~~~~~-----------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vK 594 (801)
|+|||..|+|..+|.-... .++|+..+.+.|+.|||.|+.||-++. +|||||-..|+|+.++..||
T Consensus 567 vFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~---FVHRDLATRNCLVge~l~VK 643 (774)
T KOG1026|consen 567 VFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHH---FVHRDLATRNCLVGENLVVK 643 (774)
T ss_pred EEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCc---ccccchhhhhceeccceEEE
Confidence 9999999999999875321 234888999999999999999999988 99999999999999999999
Q ss_pred eecccceeeccCCCCcCCCccccC-CCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCC--hhHHHHHh
Q 003703 595 ICDFGICRLVTEDTLYLPSFHRST-APKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGL--AGEVRRAV 670 (801)
Q Consensus 595 L~DFGla~~~~~~~~~~~~~~~~~-~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~--~~~~~~~~ 670 (801)
|+||||++.+-..+. ++.. ...=...||+||.+..+++|++||||||||+|||+++ |+.||.. -.++...+
T Consensus 644 IsDfGLsRdiYssDY-----Yk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i 718 (774)
T KOG1026|consen 644 ISDFGLSRDIYSSDY-----YKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECI 718 (774)
T ss_pred ecccccchhhhhhhh-----hcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHHHH
Confidence 999999997654432 2221 3334568999999999999999999999999999999 9999863 33577788
Q ss_pred hcCccccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHHhhh
Q 003703 671 SCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHV 725 (801)
Q Consensus 671 ~~g~~~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~l~~ 725 (801)
..|++. ..|...+.++..|+..||+.+|.+||++. ++-..|+....
T Consensus 719 ~~g~lL--------~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~-eI~~~L~~~~~ 764 (774)
T KOG1026|consen 719 RAGQLL--------SCPENCPTEVYSLMLECWNENPKRRPSFK-EIHSRLQAWAQ 764 (774)
T ss_pred HcCCcc--------cCCCCCCHHHHHHHHHHhhcCcccCCCHH-HHHHHHHHHHh
Confidence 888763 34555677999999999999999999999 78888887643
No 25
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=1.6e-38 Score=341.30 Aligned_cols=242 Identities=25% Similarity=0.341 Sum_probs=194.8
Q ss_pred CccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEecccc--CCcceeee
Q 003703 456 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYE 528 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~---~~~~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~LV~E 528 (801)
.|...+.||+|+||.||+|... |..||+|.+..... .....+.+|+.++.+++|+||++++++|. +..++|||
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 3667789999999999999874 89999999865432 22345789999999999999999999874 35789999
Q ss_pred cCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCC
Q 003703 529 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDT 608 (801)
Q Consensus 529 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~ 608 (801)
|+++|+|.+++..... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 81 ~~~~g~L~~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~---iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~ 156 (285)
T cd05631 81 IMNGGDLKFHIYNMGN-PGFDEQRAIFYAAELCCGLEDLQRER---IVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE 156 (285)
T ss_pred ecCCCcHHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC
Confidence 9999999988865432 35899999999999999999999987 9999999999999999999999999998764322
Q ss_pred CcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHH--HHHhhcCccccccCCCCCCC
Q 003703 609 LYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEV--RRAVSCGKLSSILDPLAGDW 686 (801)
Q Consensus 609 ~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~--~~~~~~g~~~~~~d~~~~~~ 686 (801)
......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ...+... +......+
T Consensus 157 -------~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~-----~~~~~~~~ 224 (285)
T cd05631 157 -------TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRR-----VKEDQEEY 224 (285)
T ss_pred -------eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHH-----hhcccccC
Confidence 123457999999999999999999999999999999999999999743221 1111100 00111234
Q ss_pred CHHHHHHHHHHHHHhhhhCCCCCCCch
Q 003703 687 PTFVARRLVDLGLQCCELYGRERPDIT 713 (801)
Q Consensus 687 ~~~~~~~l~~Li~~Cl~~dP~~RPt~~ 713 (801)
+...+..+.+|+.+||+.||.+||+..
T Consensus 225 ~~~~s~~~~~li~~~l~~~P~~R~~~~ 251 (285)
T cd05631 225 SEKFSEDAKSICRMLLTKNPKERLGCR 251 (285)
T ss_pred CccCCHHHHHHHHHHhhcCHHHhcCCC
Confidence 445667899999999999999999853
No 26
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=3.8e-38 Score=341.42 Aligned_cols=258 Identities=28% Similarity=0.411 Sum_probs=196.6
Q ss_pred cCccccceeeecCceEEEEEEEC------------------CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeE
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML------------------GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTL 515 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~------------------g~~vAiK~l~~~~~-~~~~~f~~E~~il~~l~HpnIV~l 515 (801)
++|...++||+|+||.||++.+. +..||+|.+..... .....|.+|+.+|.+++||||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 46777889999999999999752 34699999876533 234578999999999999999999
Q ss_pred ecccc--CCcceeeecCCCCchhhhhhhcC----------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceee
Q 003703 516 LGACP--EAWSLVYEYLPNGSLQDRLFRKS----------------NVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVH 577 (801)
Q Consensus 516 ~g~~~--~~~~LV~E~~~~gsL~~~L~~~~----------------~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiH 577 (801)
+++|. +..++||||+++|+|.+++.... ....++|..+++|+.||+.||.|||+.+ |+|
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---ivH 161 (304)
T cd05096 85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN---FVH 161 (304)
T ss_pred EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC---ccc
Confidence 99984 35789999999999999886432 1235788999999999999999999987 999
Q ss_pred CCCCCCCeeecCCCCeeeecccceeeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh--
Q 003703 578 GDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-- 655 (801)
Q Consensus 578 rDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-- 655 (801)
|||||+|||++.++.+||+|||+++.+...... .......+++.|+|||++..+.++.++|||||||++|||++
T Consensus 162 ~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~ 237 (304)
T cd05096 162 RDLATRNCLVGENLTIKIADFGMSRNLYAGDYY----RIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLC 237 (304)
T ss_pred cCcchhheEEcCCccEEECCCccceecccCcee----EecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHcc
Confidence 999999999999999999999999876433211 12234456889999999988899999999999999999987
Q ss_pred CCCCCCChhH--HHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHH
Q 003703 656 GRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELE 721 (801)
Q Consensus 656 G~~Pf~~~~~--~~~~~~~g~~~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~ 721 (801)
|..||..... +...... .+...........+...+..+.+|+.+||+.+|.+||++. ++.+.|+
T Consensus 238 ~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~-~i~~~l~ 303 (304)
T cd05096 238 KEQPYGELTDEQVIENAGE-FFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFS-DIHAFLT 303 (304)
T ss_pred CCCCCCcCCHHHHHHHHHH-HhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHH-HHHHHHh
Confidence 5677763322 1111100 0000000000111223456789999999999999999998 6666654
No 27
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.4e-38 Score=351.65 Aligned_cols=242 Identities=30% Similarity=0.475 Sum_probs=208.4
Q ss_pred ccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccceeeec
Q 003703 457 FSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEY 529 (801)
Q Consensus 457 f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~---~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E~ 529 (801)
|..++.||.|+.|.|-+|++. |+.+|||++.+... .....+.+|+-+|+.+.|||+++||+.+.+ ++|||.||
T Consensus 14 wkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlEy 93 (786)
T KOG0588|consen 14 WKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLEY 93 (786)
T ss_pred eeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEEe
Confidence 566778999999999999884 99999999976522 223457899999999999999999999854 68999999
Q ss_pred CCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCC
Q 003703 530 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTL 609 (801)
Q Consensus 530 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~ 609 (801)
++||-|.++|..++ +|+..++.+++.||+.|+.|+|..+ |+|||+||+|+|||.++++||+|||+|.+..++..
T Consensus 94 v~gGELFdylv~kG---~l~e~eaa~ff~QIi~gv~yCH~~~---icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gkl 167 (786)
T KOG0588|consen 94 VPGGELFDYLVRKG---PLPEREAAHFFRQILDGVSYCHAFN---ICHRDLKPENLLLDVKNNIKIADFGMASLEVPGKL 167 (786)
T ss_pred cCCchhHHHHHhhC---CCCCHHHHHHHHHHHHHHHHHhhhc---ceeccCCchhhhhhcccCEeeeccceeecccCCcc
Confidence 99999999998876 6888999999999999999999998 99999999999999999999999999998766553
Q ss_pred cCCCccccCCCCCCCCCCCccccccCCCC-cchhHHhHHHHHHHHHhCCCCCCChhHHH---HHhhcCccccccCCCCCC
Q 003703 610 YLPSFHRSTAPKGSFPYADPEYHRTGVLT-PKSDSYSFGLIILQLLTGRLPVGLAGEVR---RAVSCGKLSSILDPLAGD 685 (801)
Q Consensus 610 ~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s-~ksDVwSlGvvL~ELltG~~Pf~~~~~~~---~~~~~g~~~~~~d~~~~~ 685 (801)
-.+.+|.|.|.|||++.+.+|. .++||||.|||||.||||+.||+ .++++ ..+..|.+ +
T Consensus 168 -------LeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFd-DdNir~LLlKV~~G~f---------~ 230 (786)
T KOG0588|consen 168 -------LETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFD-DDNIRVLLLKVQRGVF---------E 230 (786)
T ss_pred -------ccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCC-CccHHHHHHHHHcCcc---------c
Confidence 2456899999999999999985 79999999999999999999998 33333 33445544 3
Q ss_pred CCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHH
Q 003703 686 WPTFVARRLVDLGLQCCELYGRERPDITPSLVKELE 721 (801)
Q Consensus 686 ~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~ 721 (801)
.|.+++.+..+|+.+|+..||..|.|+.+.+.|.+-
T Consensus 231 MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l 266 (786)
T KOG0588|consen 231 MPSNISSEAQDLLRRMLDVDPSTRITTEEILKHPFL 266 (786)
T ss_pred CCCcCCHHHHHHHHHHhccCccccccHHHHhhCchh
Confidence 466778899999999999999999999977776664
No 28
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=5e-38 Score=338.71 Aligned_cols=232 Identities=26% Similarity=0.365 Sum_probs=194.5
Q ss_pred CccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccceeee
Q 003703 456 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYE 528 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~---~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E 528 (801)
+|...+.||+|+||.||+|... |+.||+|++..... .....+.+|+.++..++||||+++++++.+ ..++|||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 81 (291)
T cd05612 2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLME 81 (291)
T ss_pred CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEe
Confidence 6778889999999999999886 88999999865432 233458899999999999999999998854 4789999
Q ss_pred cCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCC
Q 003703 529 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDT 608 (801)
Q Consensus 529 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~ 608 (801)
|+++|+|.+++.... .+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~- 154 (291)
T cd05612 82 YVPGGELFSYLRNSG---RFSNSTGLFYASEIVCALEYLHSKE---IVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR- 154 (291)
T ss_pred CCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEEEecCcchhccCC-
Confidence 999999999986543 5888999999999999999999988 999999999999999999999999999866432
Q ss_pred CcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhH--HHHHhhcCccccccCCCCCCC
Q 003703 609 LYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILDPLAGDW 686 (801)
Q Consensus 609 ~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~--~~~~~~~g~~~~~~d~~~~~~ 686 (801)
.....||+.|+|||++.+..++.++|||||||++|+|+||+.||..... ....+..+.. .+
T Consensus 155 --------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~---------~~ 217 (291)
T cd05612 155 --------TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKL---------EF 217 (291)
T ss_pred --------cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCc---------CC
Confidence 1245699999999999999999999999999999999999999975432 2233333321 23
Q ss_pred CHHHHHHHHHHHHHhhhhCCCCCCC
Q 003703 687 PTFVARRLVDLGLQCCELYGRERPD 711 (801)
Q Consensus 687 ~~~~~~~l~~Li~~Cl~~dP~~RPt 711 (801)
+...+..+.+|+.+||+.||.+||+
T Consensus 218 ~~~~~~~~~~li~~~l~~dp~~R~~ 242 (291)
T cd05612 218 PRHLDLYAKDLIKKLLVVDRTRRLG 242 (291)
T ss_pred CccCCHHHHHHHHHHcCCCHHHccC
Confidence 4445668899999999999999996
No 29
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=4.9e-38 Score=345.02 Aligned_cols=234 Identities=24% Similarity=0.367 Sum_probs=195.4
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEecccc--CCcceee
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVY 527 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~---~~~~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~LV~ 527 (801)
++|...+.||+|+||.||+|+.. |+.||+|++..... .....+.+|+.++.+++||||+++++++. +..++||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 46788889999999999999885 78999999875432 23346889999999999999999999884 3578999
Q ss_pred ecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCC
Q 003703 528 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 607 (801)
Q Consensus 528 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~ 607 (801)
||+++|+|.+++.... .+++..+..++.||+.||.|||+.+ |+||||||+||||+.++.+||+|||+++.....
T Consensus 98 e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 171 (329)
T PTZ00263 98 EFVVGGELFTHLRKAG---RFPNDVAKFYHAELVLAFEYLHSKD---IIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR 171 (329)
T ss_pred cCCCCChHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEECCCCCEEEeeccCceEcCCC
Confidence 9999999999987643 5788899999999999999999988 999999999999999999999999999876432
Q ss_pred CCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhH--HHHHhhcCccccccCCCCCC
Q 003703 608 TLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILDPLAGD 685 (801)
Q Consensus 608 ~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~--~~~~~~~g~~~~~~d~~~~~ 685 (801)
. ....||+.|+|||++.+..++.++|||||||++|+|+||+.||..... ....+..+.+ .
T Consensus 172 ~---------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~---------~ 233 (329)
T PTZ00263 172 T---------FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRL---------K 233 (329)
T ss_pred c---------ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCc---------C
Confidence 2 235699999999999999999999999999999999999999964432 2233333321 2
Q ss_pred CCHHHHHHHHHHHHHhhhhCCCCCCCc
Q 003703 686 WPTFVARRLVDLGLQCCELYGRERPDI 712 (801)
Q Consensus 686 ~~~~~~~~l~~Li~~Cl~~dP~~RPt~ 712 (801)
+|...+..+.+|+.+||+.||.+||+.
T Consensus 234 ~p~~~~~~~~~li~~~L~~dP~~R~~~ 260 (329)
T PTZ00263 234 FPNWFDGRARDLVKGLLQTDHTKRLGT 260 (329)
T ss_pred CCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 233345678899999999999999984
No 30
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.1e-38 Score=340.28 Aligned_cols=252 Identities=27% Similarity=0.378 Sum_probs=199.7
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcc--cHHHHHHHHHHHhcCCCCceeeEeccccC----Cccee
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ--GQLEFQQEVRVLSKLQHPHLVTLLGACPE----AWSLV 526 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~--~~~~f~~E~~il~~l~HpnIV~l~g~~~~----~~~LV 526 (801)
+.|....+||+|.||.||+++.. |+.||+|++..+... ......+||.||++|+||||++|.+...+ ..|||
T Consensus 117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlV 196 (560)
T KOG0600|consen 117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLV 196 (560)
T ss_pred HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEE
Confidence 34666678999999999999885 899999999877643 33456799999999999999999998733 47899
Q ss_pred eecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccC
Q 003703 527 YEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTE 606 (801)
Q Consensus 527 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~ 606 (801)
+|||+ .+|.-++.... -.|+..++.-++.|++.||.|+|+.+ |+|||||.+|||||++|.+||+|||||+++..
T Consensus 197 FeYMd-hDL~GLl~~p~--vkft~~qIKc~mkQLl~Gl~~cH~~g---vlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~ 270 (560)
T KOG0600|consen 197 FEYMD-HDLSGLLSSPG--VKFTEPQIKCYMKQLLEGLEYCHSRG---VLHRDIKGSNILIDNNGVLKIADFGLARFYTP 270 (560)
T ss_pred Eeccc-chhhhhhcCCC--cccChHHHHHHHHHHHHHHHHHhhcC---eeeccccccceEEcCCCCEEeccccceeeccC
Confidence 99995 57877775433 46888999999999999999999998 99999999999999999999999999998865
Q ss_pred CCCcCCCccccCCCCCCCCCCCcccccc-CCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhh----cC--------
Q 003703 607 DTLYLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVS----CG-------- 673 (801)
Q Consensus 607 ~~~~~~~~~~~~~~~Gt~~Y~APE~~~~-~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~----~g-------- 673 (801)
.... ..+..+-|.+|.|||.+.+ ..|++.+|+||.||||.||++|++.|....++.++-. .|
T Consensus 271 ~~~~-----~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~ 345 (560)
T KOG0600|consen 271 SGSA-----PYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWP 345 (560)
T ss_pred CCCc-----ccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccc
Confidence 4422 3577889999999998876 4799999999999999999999999987666544311 11
Q ss_pred --ccc--cccCCCCCCCCH-------HHHHHHHHHHHHhhhhCCCCCCCchHHHHH
Q 003703 674 --KLS--SILDPLAGDWPT-------FVARRLVDLGLQCCELYGRERPDITPSLVK 718 (801)
Q Consensus 674 --~~~--~~~d~~~~~~~~-------~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~ 718 (801)
++. ..+-+ ...|.. ..+...++|+..+|..||.+|.|+.+.+..
T Consensus 346 ~~kLP~~~~~kp-~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~s 400 (560)
T KOG0600|consen 346 VSKLPHATIFKP-QQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQS 400 (560)
T ss_pred cccCCcccccCC-CCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcC
Confidence 111 00001 112222 234467899999999999999999865543
No 31
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=1.5e-37 Score=347.36 Aligned_cols=253 Identities=29% Similarity=0.420 Sum_probs=200.2
Q ss_pred hcCccccceeeecCceEEEEEEEC-------CeEEEEEEeccCCc-ccHHHHHHHHHHHhcC-CCCceeeEeccccC--C
Q 003703 454 TCNFSESFKVGQGGFGCVYKGEML-------GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKL-QHPHLVTLLGACPE--A 522 (801)
Q Consensus 454 t~~f~~~~~LG~G~fG~Vy~g~~~-------g~~vAiK~l~~~~~-~~~~~f~~E~~il~~l-~HpnIV~l~g~~~~--~ 522 (801)
.++|...+.||+|+||.||+|+.. +..||||+++.... .....+.+|+.+|..+ +|||||+++|+|.+ .
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~ 113 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGP 113 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc
Confidence 456888899999999999999742 56899999975432 3345688999999999 89999999999854 5
Q ss_pred cceeeecCCCCchhhhhhhcCC----------------------------------------------------------
Q 003703 523 WSLVYEYLPNGSLQDRLFRKSN---------------------------------------------------------- 544 (801)
Q Consensus 523 ~~LV~E~~~~gsL~~~L~~~~~---------------------------------------------------------- 544 (801)
.++||||+++|+|.+++.....
T Consensus 114 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (375)
T cd05104 114 TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGS 193 (375)
T ss_pred ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccce
Confidence 7899999999999998864321
Q ss_pred --------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCc
Q 003703 545 --------------VSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLY 610 (801)
Q Consensus 545 --------------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~ 610 (801)
...++|..++.|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++........
T Consensus 194 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 270 (375)
T cd05104 194 YIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIRNDSNY 270 (375)
T ss_pred ecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCchhhEEEECCCcEEEecCccceeccCcccc
Confidence 125789999999999999999999987 999999999999999999999999999876543211
Q ss_pred CCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChh---HHHHHhhcCccccccCCCCCCC
Q 003703 611 LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAG---EVRRAVSCGKLSSILDPLAGDW 686 (801)
Q Consensus 611 ~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~---~~~~~~~~g~~~~~~d~~~~~~ 686 (801)
.......++..|+|||++.+..++.++|||||||++|||++ |..||.... .....+..+... ..
T Consensus 271 ----~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~--------~~ 338 (375)
T cd05104 271 ----VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRM--------LS 338 (375)
T ss_pred ----cccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccC--------CC
Confidence 11223446678999999999999999999999999999998 899986432 223333333211 11
Q ss_pred CHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHH
Q 003703 687 PTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQ 722 (801)
Q Consensus 687 ~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~ 722 (801)
+...+..+.+|+.+||+.||.+||++. ++++.|+.
T Consensus 339 ~~~~~~~l~~li~~cl~~dP~~RPs~~-eil~~l~~ 373 (375)
T cd05104 339 PECAPSEMYDIMKSCWDADPLKRPTFK-QIVQLIEQ 373 (375)
T ss_pred CCCCCHHHHHHHHHHccCChhHCcCHH-HHHHHHHh
Confidence 222346789999999999999999999 67777764
No 32
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=6e-38 Score=343.35 Aligned_cols=229 Identities=26% Similarity=0.331 Sum_probs=188.9
Q ss_pred eeeecCceEEEEEEEC--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEeccccC--CcceeeecCCCCc
Q 003703 462 KVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYLPNGS 534 (801)
Q Consensus 462 ~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~---~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E~~~~gs 534 (801)
.||+|+||.||+++.. |..||||++..... .....+.+|+.++.+++||||++++++|.. ..++||||+++|+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~ 81 (323)
T cd05571 2 LLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGGE 81 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCCc
Confidence 6999999999999875 88999999975432 223457789999999999999999998843 5789999999999
Q ss_pred hhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCCCc
Q 003703 535 LQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSF 614 (801)
Q Consensus 535 L~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~~~ 614 (801)
|.+++... ..+++..+..++.||+.||.|||+.+ |+||||||+||||+.++.+||+|||+++......
T Consensus 82 L~~~l~~~---~~~~~~~~~~~~~qi~~~L~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~------ 149 (323)
T cd05571 82 LFFHLSRE---RVFSEDRARFYGAEIVSALGYLHSCD---VVYRDLKLENLMLDKDGHIKITDFGLCKEGISDG------ 149 (323)
T ss_pred HHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCCCCEEEeeCCCCcccccCC------
Confidence 99988754 35889999999999999999999988 9999999999999999999999999987543221
Q ss_pred cccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhH--HHHHhhcCccccccCCCCCCCCHHHHH
Q 003703 615 HRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWPTFVAR 692 (801)
Q Consensus 615 ~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~--~~~~~~~g~~~~~~d~~~~~~~~~~~~ 692 (801)
.......||+.|+|||++.+..++.++|||||||++|||+||+.||...+. ....+..+. ..+|...+.
T Consensus 150 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~---------~~~p~~~~~ 220 (323)
T cd05571 150 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE---------IRFPRTLSP 220 (323)
T ss_pred CcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCC---------CCCCCCCCH
Confidence 122345799999999999999999999999999999999999999964432 222222221 133445667
Q ss_pred HHHHHHHHhhhhCCCCCCC
Q 003703 693 RLVDLGLQCCELYGRERPD 711 (801)
Q Consensus 693 ~l~~Li~~Cl~~dP~~RPt 711 (801)
.+.+|+.+||+.||.+||+
T Consensus 221 ~~~~li~~~L~~dP~~R~~ 239 (323)
T cd05571 221 EAKSLLAGLLKKDPKQRLG 239 (323)
T ss_pred HHHHHHHHHccCCHHHcCC
Confidence 8999999999999999994
No 33
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-38 Score=340.82 Aligned_cols=254 Identities=26% Similarity=0.339 Sum_probs=204.6
Q ss_pred hcCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcccHH-HHHHHHHHHhcCC-CCceeeEeccccC---Cccee
Q 003703 454 TCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQL-EFQQEVRVLSKLQ-HPHLVTLLGACPE---AWSLV 526 (801)
Q Consensus 454 t~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~~~-~f~~E~~il~~l~-HpnIV~l~g~~~~---~~~LV 526 (801)
-++|...++||.|.||.||+|+.. |..||||.++..-....+ .-.+|+..|.+|+ |||||+|...+.+ .+++|
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fV 88 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFV 88 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeee
Confidence 456778889999999999999874 899999998765443322 2468999999998 9999999998844 47899
Q ss_pred eecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccC
Q 003703 527 YEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTE 606 (801)
Q Consensus 527 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~ 606 (801)
|||| ..+|.+++..+. ..|+...+..|+.||+.||+|+|.+| ++|||+||+|||+..+..+||+|||+|+.+..
T Consensus 89 fE~M-d~NLYqLmK~R~--r~fse~~irnim~QilqGL~hiHk~G---fFHRDlKPENiLi~~~~~iKiaDFGLARev~S 162 (538)
T KOG0661|consen 89 FEFM-DCNLYQLMKDRN--RLFSESDIRNIMYQILQGLAHIHKHG---FFHRDLKPENILISGNDVIKIADFGLAREVRS 162 (538)
T ss_pred HHhh-hhhHHHHHhhcC--CcCCHHHHHHHHHHHHHHHHHHHhcC---cccccCChhheEecccceeEeccccccccccc
Confidence 9999 679999997763 68999999999999999999999998 99999999999999999999999999998865
Q ss_pred CCCcCCCccccCCCCCCCCCCCcccc-ccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhhc----Cc-------
Q 003703 607 DTLYLPSFHRSTAPKGSFPYADPEYH-RTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSC----GK------- 674 (801)
Q Consensus 607 ~~~~~~~~~~~~~~~Gt~~Y~APE~~-~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~----g~------- 674 (801)
.. ..+..+.|-+|.|||++ ..+-|+.+.|+|++|||++|+.+-++-|.+..++.+.++. |.
T Consensus 163 kp-------PYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~ 235 (538)
T KOG0661|consen 163 KP-------PYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWP 235 (538)
T ss_pred CC-------CcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccch
Confidence 43 34677899999999976 5677999999999999999999999999876665443321 10
Q ss_pred ----cccccCC--------CCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHH
Q 003703 675 ----LSSILDP--------LAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKEL 720 (801)
Q Consensus 675 ----~~~~~d~--------~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L 720 (801)
+...+.. .....-...+.++++|+.+||.+||.+|||+.+.+.+.+
T Consensus 236 eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pf 293 (538)
T KOG0661|consen 236 EGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPF 293 (538)
T ss_pred hHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCcc
Confidence 1111110 011111235678999999999999999999996655444
No 34
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=1.1e-37 Score=339.62 Aligned_cols=230 Identities=25% Similarity=0.336 Sum_probs=189.3
Q ss_pred eeecCceEEEEEEEC--CeEEEEEEeccCC---cccHHHHHHHHHHHhcCCCCceeeEeccccC--CcceeeecCCCCch
Q 003703 463 VGQGGFGCVYKGEML--GRTVAIKMLYSHN---MQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYLPNGSL 535 (801)
Q Consensus 463 LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~---~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E~~~~gsL 535 (801)
||+|+||.||+++.. +..||+|++.... ......+.+|+.++.+++||||++++++|.+ ..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 799999999999885 7889999986532 2234467889999999999999999998843 57899999999999
Q ss_pred hhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCCCcc
Q 003703 536 QDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFH 615 (801)
Q Consensus 536 ~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~~~~ 615 (801)
.+++.... .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++...... .
T Consensus 81 ~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~---i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~------~ 148 (312)
T cd05585 81 FHHLQREG---RFDLSRARFYTAELLCALENLHKFN---VIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD------D 148 (312)
T ss_pred HHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHeEECCCCcEEEEECcccccCccCC------C
Confidence 99987643 5888999999999999999999988 9999999999999999999999999998643222 1
Q ss_pred ccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhH--HHHHhhcCccccccCCCCCCCCHHHHHH
Q 003703 616 RSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWPTFVARR 693 (801)
Q Consensus 616 ~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~--~~~~~~~g~~~~~~d~~~~~~~~~~~~~ 693 (801)
......||+.|+|||++.+..++.++|||||||++|||+||+.||..... ....+..+. ..++...+..
T Consensus 149 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 219 (312)
T cd05585 149 KTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEP---------LRFPDGFDRD 219 (312)
T ss_pred ccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCC---------CCCCCcCCHH
Confidence 23455799999999999999999999999999999999999999964332 222222211 1234445678
Q ss_pred HHHHHHHhhhhCCCCCCCch
Q 003703 694 LVDLGLQCCELYGRERPDIT 713 (801)
Q Consensus 694 l~~Li~~Cl~~dP~~RPt~~ 713 (801)
+.+|+.+||+.||.+||+..
T Consensus 220 ~~~li~~~L~~dp~~R~~~~ 239 (312)
T cd05585 220 AKDLLIGLLSRDPTRRLGYN 239 (312)
T ss_pred HHHHHHHHcCCCHHHcCCCC
Confidence 89999999999999999764
No 35
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-38 Score=337.26 Aligned_cols=247 Identities=26% Similarity=0.341 Sum_probs=203.6
Q ss_pred CccccceeeecCceEEEEEEEC--CeEEEEEEeccCCccc-HHHHHHHHHHHhcCCCCceeeEecccc--CCcceeeecC
Q 003703 456 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQG-QLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYL 530 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~-~~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~LV~E~~ 530 (801)
.|.....||+|+||.||+|.+. ++.||||++....... ..++.+|+.+|++++++||.++||.+. ..+.++||||
T Consensus 14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~ 93 (467)
T KOG0201|consen 14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYC 93 (467)
T ss_pred ccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHh
Confidence 3555567999999999999886 8899999998765543 467889999999999999999999874 4577899999
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCc
Q 003703 531 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLY 610 (801)
Q Consensus 531 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~ 610 (801)
.||++.+.|.... .+....+.-|+.++..||.|||..+ .+|||||+.||||..+|.+||+|||.+-.++....
T Consensus 94 ~gGsv~~lL~~~~---~~~E~~i~~ilre~l~~l~ylH~~~---kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~- 166 (467)
T KOG0201|consen 94 GGGSVLDLLKSGN---ILDEFEIAVILREVLKGLDYLHSEK---KIHRDIKAANILLSESGDVKLADFGVAGQLTNTVK- 166 (467)
T ss_pred cCcchhhhhccCC---CCccceeeeehHHHHHHhhhhhhcc---eecccccccceeEeccCcEEEEecceeeeeechhh-
Confidence 9999999886543 3466677778999999999999988 99999999999999999999999999988765442
Q ss_pred CCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhhcCccccccCCCCCCCCHHH
Q 003703 611 LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFV 690 (801)
Q Consensus 611 ~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~g~~~~~~d~~~~~~~~~~ 690 (801)
+..+++|||.|||||++....|+.|+||||||++.+||.+|.+|+.....++-++ -+.....+.+....
T Consensus 167 -----rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlf------lIpk~~PP~L~~~~ 235 (467)
T KOG0201|consen 167 -----RRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLF------LIPKSAPPRLDGDF 235 (467)
T ss_pred -----ccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEE------eccCCCCCcccccc
Confidence 3467899999999999998899999999999999999999999997544422111 11111122333356
Q ss_pred HHHHHHHHHHhhhhCCCCCCCchHHHHHHH
Q 003703 691 ARRLVDLGLQCCELYGRERPDITPSLVKEL 720 (801)
Q Consensus 691 ~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L 720 (801)
+..|.+++..||+.||+.||++.+.+.+.+
T Consensus 236 S~~~kEFV~~CL~k~P~~RpsA~~LLKh~F 265 (467)
T KOG0201|consen 236 SPPFKEFVEACLDKNPEFRPSAKELLKHKF 265 (467)
T ss_pred CHHHHHHHHHHhhcCcccCcCHHHHhhhHH
Confidence 778999999999999999999997666544
No 36
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=3.3e-37 Score=338.70 Aligned_cols=252 Identities=23% Similarity=0.332 Sum_probs=198.2
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEecccc--CCcceeeec
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEY 529 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~-~~~~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~LV~E~ 529 (801)
++|.....||+|+||.||+++.. |..||+|.+..... .....|.+|+.+|.+++||||+++++++. +..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 84 (331)
T cd06649 5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 84 (331)
T ss_pred ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeec
Confidence 57888899999999999999886 78899999876432 23456899999999999999999999884 357899999
Q ss_pred CCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCC
Q 003703 530 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTL 609 (801)
Q Consensus 530 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~ 609 (801)
+++|+|.+++.... .+++..+..++.+++.||.|||+.+ +|+||||||+|||++.++.+||+|||++.......
T Consensus 85 ~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 158 (331)
T cd06649 85 MDGGSLDQVLKEAK---RIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM- 158 (331)
T ss_pred CCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCcccccccccc-
Confidence 99999999986543 5788999999999999999999854 39999999999999999999999999987664321
Q ss_pred cCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhH--HHHHhhcCc-------cc----
Q 003703 610 YLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGK-------LS---- 676 (801)
Q Consensus 610 ~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~--~~~~~~~g~-------~~---- 676 (801)
.....||+.|+|||++.+..++.++|||||||++|||+||+.||..... ....+.... ..
T Consensus 159 -------~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (331)
T cd06649 159 -------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISP 231 (331)
T ss_pred -------cccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCc
Confidence 2345699999999999999999999999999999999999999964322 111111000 00
Q ss_pred -----------------------c----ccCCCCCCC-CHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHH
Q 003703 677 -----------------------S----ILDPLAGDW-PTFVARRLVDLGLQCCELYGRERPDITPSLVKE 719 (801)
Q Consensus 677 -----------------------~----~~d~~~~~~-~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~ 719 (801)
. +........ ....+..+.+|+.+||+.||.+|||+.+.+.+.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~ 302 (331)
T cd06649 232 RPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHT 302 (331)
T ss_pred ccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcCh
Confidence 0 000000000 112456899999999999999999999655443
No 37
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=1.1e-37 Score=342.43 Aligned_cols=246 Identities=24% Similarity=0.288 Sum_probs=198.4
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccceee
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVY 527 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~---~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~ 527 (801)
++|.....||+|+||.||+|+.. |..||||++..... .....+.+|+.++..++||||+++++++.+ ..++||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 36888899999999999999885 78999999975432 233468899999999999999999998854 478999
Q ss_pred ecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCC
Q 003703 528 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 607 (801)
Q Consensus 528 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~ 607 (801)
||+++|+|.+++.... .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 81 e~~~g~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~- 153 (333)
T cd05600 81 EYVPGGDFRTLLNNLG---VLSEDHARFYMAEMFEAVDALHELG---YIHRDLKPENFLIDASGHIKLTDFGLSKGIVT- 153 (333)
T ss_pred eCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCCEEEEeCcCCccccc-
Confidence 9999999999986543 5788999999999999999999988 99999999999999999999999999976543
Q ss_pred CCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhH--HHHHhhcCccccccC-CCCC
Q 003703 608 TLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILD-PLAG 684 (801)
Q Consensus 608 ~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~--~~~~~~~g~~~~~~d-~~~~ 684 (801)
......||+.|+|||++.+..++.++|||||||++|||++|.+||..... ....+... ...+. +...
T Consensus 154 --------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~ 223 (333)
T cd05600 154 --------YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYW--KETLQRPVYD 223 (333)
T ss_pred --------ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhc--cccccCCCCC
Confidence 12355799999999999999999999999999999999999999975432 22222111 11111 1111
Q ss_pred CCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHH
Q 003703 685 DWPTFVARRLVDLGLQCCELYGRERPDITPSLV 717 (801)
Q Consensus 685 ~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~ 717 (801)
......+..+.+|+.+||..+|.+||++.+.+.
T Consensus 224 ~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~ 256 (333)
T cd05600 224 DPRFNLSDEAWDLITKLINDPSRRFGSLEDIKN 256 (333)
T ss_pred ccccccCHHHHHHHHHHhhChhhhcCCHHHHHh
Confidence 111235678899999999999999999885443
No 38
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=3.6e-37 Score=335.91 Aligned_cols=252 Identities=25% Similarity=0.430 Sum_probs=200.6
Q ss_pred cCccccceeeecCceEEEEEEEC--Ce----EEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEeccccC-Cccee
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GR----TVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACPE-AWSLV 526 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~----~vAiK~l~~~~~-~~~~~f~~E~~il~~l~HpnIV~l~g~~~~-~~~LV 526 (801)
.+|...+.||+|+||.||+|.+. |. .||+|++..... .....|.+|+.++..++||||++++|+|.. ..++|
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~v 86 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLI 86 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCCCceee
Confidence 45888889999999999999863 33 489999875433 344578899999999999999999999854 57899
Q ss_pred eecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccC
Q 003703 527 YEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTE 606 (801)
Q Consensus 527 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~ 606 (801)
++|+++|+|.+++.... ..+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.+..
T Consensus 87 ~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~---iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~ 161 (316)
T cd05108 87 TQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLEERR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 161 (316)
T ss_pred eecCCCCCHHHHHHhcc--ccCCHHHHHHHHHHHHHHHHHHHhcC---eeccccchhheEecCCCcEEEccccccccccC
Confidence 99999999999987643 45889999999999999999999987 99999999999999999999999999987754
Q ss_pred CCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChhH--HHHHhhcCccccccCCCC
Q 003703 607 DTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKLSSILDPLA 683 (801)
Q Consensus 607 ~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~~--~~~~~~~g~~~~~~d~~~ 683 (801)
.... .......+++.|+|||++.+..++.++|||||||++|||++ |..||..... ....+..+...
T Consensus 162 ~~~~----~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~------- 230 (316)
T cd05108 162 DEKE----YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL------- 230 (316)
T ss_pred CCcc----eeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhCCCCC-------
Confidence 3221 11123345778999999999999999999999999999998 9999974332 22222222111
Q ss_pred CCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHHhh
Q 003703 684 GDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLH 724 (801)
Q Consensus 684 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~l~ 724 (801)
..+...+..+.+++.+||..+|.+||++. .+...|..+.
T Consensus 231 -~~~~~~~~~~~~li~~cl~~~p~~Rps~~-~l~~~l~~~~ 269 (316)
T cd05108 231 -PQPPICTIDVYMIMVKCWMIDADSRPKFR-ELIIEFSKMA 269 (316)
T ss_pred -CCCCCCCHHHHHHHHHHccCChhhCcCHH-HHHHHHHHHH
Confidence 11222345789999999999999999999 5666666554
No 39
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=3.5e-37 Score=327.30 Aligned_cols=249 Identities=24% Similarity=0.350 Sum_probs=199.3
Q ss_pred cCccccceeeecCceEEEEEEEC-----CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEecccc--CCccee
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML-----GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLV 526 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~-----g~~vAiK~l~~~~~-~~~~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~LV 526 (801)
++|...+.||+|+||.||+|.+. +..||+|.++.... .....|.+|+.++.+++||||++++|++. +..++|
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 84 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIV 84 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEE
Confidence 46778889999999999999763 56899999876533 33456889999999999999999999984 357899
Q ss_pred eecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccC
Q 003703 527 YEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTE 606 (801)
Q Consensus 527 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~ 606 (801)
|||+++|+|.+++.... ..++|..++.++.|++.||.|||+.+ ++||||||+|||++.++.+|++|||.+.....
T Consensus 85 ~e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~~i~~al~~lH~~~---iiH~dikp~nili~~~~~~~l~dfg~~~~~~~ 159 (266)
T cd05064 85 TEYMSNGALDSFLRKHE--GQLVAGQLMGMLPGLASGMKYLSEMG---YVHKGLAAHKVLVNSDLVCKISGFRRLQEDKS 159 (266)
T ss_pred EEeCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCC---EeeccccHhhEEEcCCCcEEECCCcccccccc
Confidence 99999999999987643 46899999999999999999999987 99999999999999999999999998765432
Q ss_pred CCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChhH--HHHHhhcCccccccCCCC
Q 003703 607 DTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKLSSILDPLA 683 (801)
Q Consensus 607 ~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~~--~~~~~~~g~~~~~~d~~~ 683 (801)
... .......++..|+|||++.+..++.++|||||||++|||++ |..||..... ....+..+...
T Consensus 160 ~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~------- 227 (266)
T cd05064 160 EAI-----YTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGFRL------- 227 (266)
T ss_pred cch-----hcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCC-------
Confidence 211 11223345678999999999999999999999999999775 9999964332 22333333211
Q ss_pred CCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHH
Q 003703 684 GDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQ 722 (801)
Q Consensus 684 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~ 722 (801)
..+...+..+.+++.+||+.+|.+||++. ++.+.|..
T Consensus 228 -~~~~~~~~~~~~li~~c~~~~p~~RP~~~-~i~~~l~~ 264 (266)
T cd05064 228 -PAPRNCPNLLHQLMLDCWQKERGERPRFS-QIHSILSK 264 (266)
T ss_pred -CCCCCCCHHHHHHHHHHcCCCchhCCCHH-HHHHHHHh
Confidence 12233456789999999999999999998 67777764
No 40
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.5e-38 Score=311.01 Aligned_cols=242 Identities=25% Similarity=0.366 Sum_probs=203.5
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccceee
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVY 527 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~---~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~ 527 (801)
++|..++.||+|-||.||.|+.+ +-.||+|++.+... +...++.+|++|-+.|+||||+++||+|.+ ..||++
T Consensus 22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLil 101 (281)
T KOG0580|consen 22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLIL 101 (281)
T ss_pred hhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEE
Confidence 45788889999999999999886 77899999976543 334568899999999999999999999965 479999
Q ss_pred ecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCC
Q 003703 528 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 607 (801)
Q Consensus 528 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~ 607 (801)
||.++|+|...|..... ..++......++.|+|.||.|+|..+ ||||||||+|+|++..+..||+|||.+-..+.
T Consensus 102 Eya~~gel~k~L~~~~~-~~f~e~~~a~Yi~q~A~Al~y~h~k~---VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~- 176 (281)
T KOG0580|consen 102 EYAPRGELYKDLQEGRM-KRFDEQRAATYIKQLANALLYCHLKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPS- 176 (281)
T ss_pred EecCCchHHHHHHhccc-ccccccchhHHHHHHHHHHHHhccCC---cccCCCCHHHhccCCCCCeeccCCCceeecCC-
Confidence 99999999999974432 45777888899999999999999987 99999999999999999999999999876542
Q ss_pred CCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChh--HHHHHhhcCccccccCCCCCC
Q 003703 608 TLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAG--EVRRAVSCGKLSSILDPLAGD 685 (801)
Q Consensus 608 ~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~--~~~~~~~~g~~~~~~d~~~~~ 685 (801)
.+..+.+||..|.+||...+..++..+|+|++||+.||++.|.+||.... .....+..-+ -.
T Consensus 177 -------~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~---------~~ 240 (281)
T KOG0580|consen 177 -------NKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVD---------LK 240 (281)
T ss_pred -------CCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHcc---------cc
Confidence 24567899999999999999999999999999999999999999997433 2222222211 13
Q ss_pred CCHHHHHHHHHHHHHhhhhCCCCCCCchHHHH
Q 003703 686 WPTFVARRLVDLGLQCCELYGRERPDITPSLV 717 (801)
Q Consensus 686 ~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~ 717 (801)
+|..++....+|+.+|+..+|.+|.+..+.+.
T Consensus 241 ~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~ 272 (281)
T KOG0580|consen 241 FPSTISGGAADLISRLLVKNPIERLALTEVMD 272 (281)
T ss_pred CCcccChhHHHHHHHHhccCccccccHHHHhh
Confidence 45667788999999999999999999885443
No 41
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=1.9e-37 Score=346.48 Aligned_cols=254 Identities=28% Similarity=0.453 Sum_probs=200.5
Q ss_pred hcCccccceeeecCceEEEEEEEC-------CeEEEEEEeccCCcc-cHHHHHHHHHHHhcC-CCCceeeEeccccC--C
Q 003703 454 TCNFSESFKVGQGGFGCVYKGEML-------GRTVAIKMLYSHNMQ-GQLEFQQEVRVLSKL-QHPHLVTLLGACPE--A 522 (801)
Q Consensus 454 t~~f~~~~~LG~G~fG~Vy~g~~~-------g~~vAiK~l~~~~~~-~~~~f~~E~~il~~l-~HpnIV~l~g~~~~--~ 522 (801)
.++|...+.||+|+||.||+|+.. +..||+|++...... ....+.+|+.++..+ +|||||+++|+|.+ .
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~ 116 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGP 116 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCC
Confidence 346888889999999999998753 357999999765432 344688999999999 89999999999854 4
Q ss_pred cceeeecCCCCchhhhhhhcC-----------------------------------------------------------
Q 003703 523 WSLVYEYLPNGSLQDRLFRKS----------------------------------------------------------- 543 (801)
Q Consensus 523 ~~LV~E~~~~gsL~~~L~~~~----------------------------------------------------------- 543 (801)
.++||||+++|+|.+++....
T Consensus 117 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (374)
T cd05106 117 VLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSD 196 (374)
T ss_pred eEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccccc
Confidence 789999999999999885431
Q ss_pred --------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCCCcc
Q 003703 544 --------NVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFH 615 (801)
Q Consensus 544 --------~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~~~~ 615 (801)
...++++..+++|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++........ .
T Consensus 197 ~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g---iiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~----~ 269 (374)
T cd05106 197 SKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKN---CIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNY----V 269 (374)
T ss_pred ccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---EEeccCchheEEEeCCCeEEEeeceeeeeccCCcce----e
Confidence 0124788999999999999999999987 999999999999999999999999999876433211 1
Q ss_pred ccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChhH---HHHHhhcCccccccCCCCCCCCHHHH
Q 003703 616 RSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE---VRRAVSCGKLSSILDPLAGDWPTFVA 691 (801)
Q Consensus 616 ~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~~---~~~~~~~g~~~~~~d~~~~~~~~~~~ 691 (801)
......+++.|+|||++.+..++.++|||||||++|||++ |+.||..... ....+..+. .+ ..+...+
T Consensus 270 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~-----~~---~~~~~~~ 341 (374)
T cd05106 270 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGY-----QM---SRPDFAP 341 (374)
T ss_pred eccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHccc-----Cc---cCCCCCC
Confidence 1223346678999999988999999999999999999997 9999964322 122222221 11 1122235
Q ss_pred HHHHHHHHHhhhhCCCCCCCchHHHHHHHHHh
Q 003703 692 RRLVDLGLQCCELYGRERPDITPSLVKELEQL 723 (801)
Q Consensus 692 ~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~l 723 (801)
..+.+++.+||+.||.+||++. .+++.|+.+
T Consensus 342 ~~l~~li~~cl~~dp~~RPs~~-~l~~~l~~~ 372 (374)
T cd05106 342 PEIYSIMKMCWNLEPTERPTFS-QISQLIQRQ 372 (374)
T ss_pred HHHHHHHHHHcCCChhhCcCHH-HHHHHHHHH
Confidence 6889999999999999999999 788888764
No 42
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2.2e-37 Score=356.67 Aligned_cols=248 Identities=21% Similarity=0.251 Sum_probs=201.6
Q ss_pred CccccceeeecCceEEEEEEEC---CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEecccc--CCcceeeecC
Q 003703 456 NFSESFKVGQGGFGCVYKGEML---GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYL 530 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~---g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~LV~E~~ 530 (801)
.|...+.||+|+||.||++... +..||+|.+..........+.+|+.+|..++|||||+++++|. +..+|||||+
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~ 147 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG 147 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence 3788889999999999999764 5789999876555444556888999999999999999999984 4588999999
Q ss_pred CCCchhhhhhhc-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCC
Q 003703 531 PNGSLQDRLFRK-SNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTL 609 (801)
Q Consensus 531 ~~gsL~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~ 609 (801)
++|+|.++|... ....++++..+..++.||+.||.|||+.+ |+||||||+||||+.++.+||+|||+++.+.....
T Consensus 148 ~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~ 224 (478)
T PTZ00267 148 SGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRK---MMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS 224 (478)
T ss_pred CCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCcCHHhEEECCCCcEEEEeCcCceecCCccc
Confidence 999999988643 22346889999999999999999999987 99999999999999999999999999987654321
Q ss_pred cCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhH--HHHHhhcCccccccCCCCCCCC
Q 003703 610 YLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWP 687 (801)
Q Consensus 610 ~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~--~~~~~~~g~~~~~~d~~~~~~~ 687 (801)
. .......||+.|+|||++.+..++.++|||||||++|||+||+.||..... +...+..+... .++
T Consensus 225 ~----~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~--------~~~ 292 (478)
T PTZ00267 225 L----DVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYD--------PFP 292 (478)
T ss_pred c----ccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC--------CCC
Confidence 1 123456799999999999999999999999999999999999999975432 22222223221 123
Q ss_pred HHHHHHHHHHHHHhhhhCCCCCCCchHHHHH
Q 003703 688 TFVARRLVDLGLQCCELYGRERPDITPSLVK 718 (801)
Q Consensus 688 ~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~ 718 (801)
...+..+.+|+.+||+.+|..||++.+.+.+
T Consensus 293 ~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~ 323 (478)
T PTZ00267 293 CPVSSGMKALLDPLLSKNPALRPTTQQLLHT 323 (478)
T ss_pred ccCCHHHHHHHHHHhccChhhCcCHHHHHhC
Confidence 3355689999999999999999999866543
No 43
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=1e-37 Score=341.57 Aligned_cols=229 Identities=26% Similarity=0.338 Sum_probs=187.7
Q ss_pred eeeecCceEEEEEEEC--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEecccc--CCcceeeecCCCCc
Q 003703 462 KVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYLPNGS 534 (801)
Q Consensus 462 ~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~---~~~~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~LV~E~~~~gs 534 (801)
.||+|+||.||+++.. |..||+|++..... .....+.+|+.++..++||||++++++|. +..++||||+++|+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~ 81 (323)
T cd05595 2 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGE 81 (323)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCCc
Confidence 6999999999999874 88999999875422 22345778999999999999999999884 35789999999999
Q ss_pred hhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCCCc
Q 003703 535 LQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSF 614 (801)
Q Consensus 535 L~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~~~ 614 (801)
|..++.... .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 82 L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~----- 150 (323)
T cd05595 82 LFFHLSRER---VFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA----- 150 (323)
T ss_pred HHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEEcCCCCEEecccHHhccccCCCC-----
Confidence 998886543 5889999999999999999999987 99999999999999999999999999875432211
Q ss_pred cccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhH--HHHHhhcCccccccCCCCCCCCHHHHH
Q 003703 615 HRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWPTFVAR 692 (801)
Q Consensus 615 ~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~--~~~~~~~g~~~~~~d~~~~~~~~~~~~ 692 (801)
......||+.|+|||++.+..++.++|||||||++|||++|+.||...+. ....+..+. ..+|...+.
T Consensus 151 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~---------~~~p~~~~~ 220 (323)
T cd05595 151 -TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEE---------IRFPRTLSP 220 (323)
T ss_pred -ccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC---------CCCCCCCCH
Confidence 12345799999999999999999999999999999999999999964432 122221111 123444567
Q ss_pred HHHHHHHHhhhhCCCCCCC
Q 003703 693 RLVDLGLQCCELYGRERPD 711 (801)
Q Consensus 693 ~l~~Li~~Cl~~dP~~RPt 711 (801)
.+.+|+.+||+.||.+||+
T Consensus 221 ~~~~li~~~L~~dP~~R~~ 239 (323)
T cd05595 221 EAKSLLAGLLKKDPKQRLG 239 (323)
T ss_pred HHHHHHHHHccCCHHHhCC
Confidence 8899999999999999983
No 44
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=5.7e-37 Score=327.93 Aligned_cols=251 Identities=33% Similarity=0.516 Sum_probs=201.8
Q ss_pred CccccceeeecCceEEEEEEECC-------eEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccce
Q 003703 456 NFSESFKVGQGGFGCVYKGEMLG-------RTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSL 525 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~g-------~~vAiK~l~~~~~-~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~L 525 (801)
+|...+.||+|+||.||+|...+ ..||+|.+..... .....|.+|+.++..++||||+++++++.. ..++
T Consensus 6 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 85 (283)
T cd05048 6 AVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCM 85 (283)
T ss_pred HcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceEE
Confidence 56677789999999999998742 5699999875433 234568999999999999999999999854 4789
Q ss_pred eeecCCCCchhhhhhhcCCC-------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCC
Q 003703 526 VYEYLPNGSLQDRLFRKSNV-------------SPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELS 592 (801)
Q Consensus 526 V~E~~~~gsL~~~L~~~~~~-------------~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~ 592 (801)
+|||+++|+|.+++...... ..+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.
T Consensus 86 ~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~---i~H~dlkp~Nil~~~~~~ 162 (283)
T cd05048 86 LFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHH---FVHRDLAARNCLVGEGLT 162 (283)
T ss_pred EEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccccceEEEcCCCc
Confidence 99999999999998764221 45888999999999999999999987 999999999999999999
Q ss_pred eeeecccceeeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChh--HHHHH
Q 003703 593 SKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAG--EVRRA 669 (801)
Q Consensus 593 vKL~DFGla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~--~~~~~ 669 (801)
+||+|||+++....... ........+++.|+|||++.+..++.++|||||||++|||++ |..||.... .+...
T Consensus 163 ~~L~dfg~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~ 238 (283)
T cd05048 163 VKISDFGLSRDIYSADY----YRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEM 238 (283)
T ss_pred EEECCCcceeecccccc----ccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 99999999986543221 112334567889999999988999999999999999999998 999986422 23333
Q ss_pred hhcCccccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHH
Q 003703 670 VSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQ 722 (801)
Q Consensus 670 ~~~g~~~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~ 722 (801)
+..+... ..+...+..+.+|+.+||+.||.+||++. ++.+.|+.
T Consensus 239 i~~~~~~--------~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~-~i~~~l~~ 282 (283)
T cd05048 239 IRSRQLL--------PCPEDCPARVYALMIECWNEIPARRPRFK-DIHTRLRS 282 (283)
T ss_pred HHcCCcC--------CCcccCCHHHHHHHHHHccCChhhCcCHH-HHHHHHhc
Confidence 3333222 22344567899999999999999999999 67766653
No 45
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=1.7e-37 Score=340.70 Aligned_cols=229 Identities=27% Similarity=0.325 Sum_probs=188.2
Q ss_pred eeeecCceEEEEEEEC--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEeccccC--CcceeeecCCCCc
Q 003703 462 KVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYLPNGS 534 (801)
Q Consensus 462 ~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~---~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E~~~~gs 534 (801)
.||+|+||.||++... |..||+|++..... .....+.+|+.++..++||||+++++++.+ ..++||||+++|+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~ 81 (328)
T cd05593 2 LLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGE 81 (328)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCCC
Confidence 6999999999999875 88999999975432 233467889999999999999999988843 5789999999999
Q ss_pred hhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCCCc
Q 003703 535 LQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSF 614 (801)
Q Consensus 535 L~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~~~ 614 (801)
|.+++... ..+++..+..|+.||+.||.|||+.+ |+||||||+||||+.++.+||+|||+++.......
T Consensus 82 L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~----- 150 (328)
T cd05593 82 LFFHLSRE---RVFSEDRTRFYGAEIVSALDYLHSGK---IVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAA----- 150 (328)
T ss_pred HHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeEECCCCcEEEecCcCCccCCCccc-----
Confidence 99888654 35889999999999999999999988 99999999999999999999999999875432211
Q ss_pred cccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHH--HHHhhcCccccccCCCCCCCCHHHHH
Q 003703 615 HRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEV--RRAVSCGKLSSILDPLAGDWPTFVAR 692 (801)
Q Consensus 615 ~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~--~~~~~~g~~~~~~d~~~~~~~~~~~~ 692 (801)
......||+.|+|||++.+..++.++|||||||++|+|++|+.||...+.. ...+..+. ..+|...+.
T Consensus 151 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~---------~~~p~~~~~ 220 (328)
T cd05593 151 -TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMED---------IKFPRTLSA 220 (328)
T ss_pred -ccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCC---------ccCCCCCCH
Confidence 123457999999999999999999999999999999999999999644322 11111111 123444567
Q ss_pred HHHHHHHHhhhhCCCCCCC
Q 003703 693 RLVDLGLQCCELYGRERPD 711 (801)
Q Consensus 693 ~l~~Li~~Cl~~dP~~RPt 711 (801)
.+.+|+.+||..||.+||+
T Consensus 221 ~~~~li~~~L~~dP~~R~~ 239 (328)
T cd05593 221 DAKSLLSGLLIKDPNKRLG 239 (328)
T ss_pred HHHHHHHHHcCCCHHHcCC
Confidence 8899999999999999983
No 46
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=3.3e-37 Score=330.67 Aligned_cols=250 Identities=22% Similarity=0.272 Sum_probs=194.0
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccceeee
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYE 528 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~--~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E 528 (801)
++|...+.||+|+||.||+++.. +..||+|++..... .....+.+|+.++..++||||++++++|.+ ..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 36888899999999999999986 78899999875432 234467899999999999999999998843 5789999
Q ss_pred cCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCC
Q 003703 529 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDT 608 (801)
Q Consensus 529 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~ 608 (801)
|++++++..+... ...+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 81 ~~~~~~l~~~~~~---~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 154 (287)
T cd07848 81 YVEKNMLELLEEM---PNGVPPEKVRSYIYQLIKAIHWCHKND---IVHRDIKPENLLISHNDVLKLCDFGFARNLSEGS 154 (287)
T ss_pred cCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEEeeccCcccccccc
Confidence 9998877654432 235888999999999999999999987 9999999999999999999999999998764322
Q ss_pred CcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhh----cCc----------
Q 003703 609 LYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVS----CGK---------- 674 (801)
Q Consensus 609 ~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~----~g~---------- 674 (801)
.. ......||+.|+|||++.+..++.++|||||||++|||++|++||........... .+.
T Consensus 155 ~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (287)
T cd07848 155 NA-----NYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFY 229 (287)
T ss_pred cc-----cccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhh
Confidence 11 12345689999999999988999999999999999999999999974332211110 000
Q ss_pred ----cccccCCCC-------CCCCHHHHHHHHHHHHHhhhhCCCCCCCchHH
Q 003703 675 ----LSSILDPLA-------GDWPTFVARRLVDLGLQCCELYGRERPDITPS 715 (801)
Q Consensus 675 ----~~~~~d~~~-------~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~ 715 (801)
+.....+.. ..+....+..+.+|+.+||+.||.+|||+.+.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~ 281 (287)
T cd07848 230 SNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQC 281 (287)
T ss_pred ccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHH
Confidence 000000000 01112345679999999999999999999843
No 47
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-37 Score=366.03 Aligned_cols=250 Identities=31% Similarity=0.533 Sum_probs=205.6
Q ss_pred ccccceeeecCceEEEEEEEC---Ce----EEEEEEeccCC-cccHHHHHHHHHHHhcCCCCceeeEeccccC--Cccee
Q 003703 457 FSESFKVGQGGFGCVYKGEML---GR----TVAIKMLYSHN-MQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLV 526 (801)
Q Consensus 457 f~~~~~LG~G~fG~Vy~g~~~---g~----~vAiK~l~~~~-~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV 526 (801)
......||+|.||.||.|... |. .||||.+.... .+...+|.+|..+|+.++|||||+++|.|.+ ..+++
T Consensus 694 v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i~ 773 (1025)
T KOG1095|consen 694 VTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLIL 773 (1025)
T ss_pred eEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEEE
Confidence 344567999999999999875 33 49999997653 4566789999999999999999999999954 47899
Q ss_pred eecCCCCchhhhhhhcC----CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeeccccee
Q 003703 527 YEYLPNGSLQDRLFRKS----NVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR 602 (801)
Q Consensus 527 ~E~~~~gsL~~~L~~~~----~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~ 602 (801)
+|||.+|+|..+|.... ....++....+.|+.|||.|+.||++++ +|||||...|+||+....|||+|||+|+
T Consensus 774 leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~---fvHRDLAaRNCLL~~~r~VKIaDFGlAr 850 (1025)
T KOG1095|consen 774 LEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKH---FVHRDLAARNCLLDERRVVKIADFGLAR 850 (1025)
T ss_pred ehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCC---CcCcchhhhheeecccCcEEEcccchhH
Confidence 99999999999998652 1356889999999999999999999988 9999999999999999999999999999
Q ss_pred eccCCCCcCCCccccCCC-CCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChhH--HHH-HhhcCcccc
Q 003703 603 LVTEDTLYLPSFHRSTAP-KGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRR-AVSCGKLSS 677 (801)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~-~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~~--~~~-~~~~g~~~~ 677 (801)
.+-....+ +.... .-...|||||.+..+.++.|+|||||||+|||++| |..||....+ +.. ....|++
T Consensus 851 Diy~~~yy-----r~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~ggRL-- 923 (1025)
T KOG1095|consen 851 DIYDKDYY-----RKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGGRL-- 923 (1025)
T ss_pred hhhhchhe-----eccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCCcc--
Confidence 55443322 22222 22347999999999999999999999999999999 9999986554 333 2334422
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHHhh
Q 003703 678 ILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLH 724 (801)
Q Consensus 678 ~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~l~ 724 (801)
+.|..++..+.+|+++||+.+|++||+++ .+++.+..+.
T Consensus 924 -------~~P~~CP~~ly~lM~~CW~~~pe~RP~F~-~i~~q~~~i~ 962 (1025)
T KOG1095|consen 924 -------DPPSYCPEKLYQLMLQCWKHDPEDRPSFR-TIVEQDPAIS 962 (1025)
T ss_pred -------CCCCCCChHHHHHHHHHccCChhhCccHH-HHHhhhhhhh
Confidence 34666778999999999999999999999 6777666553
No 48
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=2.8e-37 Score=340.67 Aligned_cols=233 Identities=25% Similarity=0.303 Sum_probs=193.0
Q ss_pred cCccccceeeecCceEEEEEEEC---CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEeccccC--Cccee
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML---GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLV 526 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~---g~~vAiK~l~~~~~---~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV 526 (801)
++|.....||+|+||.||+|.+. +..||+|++..... .....+.+|+.++..++|||||++++++.+ ..++|
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 109 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLV 109 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEE
Confidence 46788889999999999999864 36899999865322 233468899999999999999999999854 47899
Q ss_pred eecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccC
Q 003703 527 YEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTE 606 (801)
Q Consensus 527 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~ 606 (801)
|||+++|+|.+++.... .+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 110 ~Ey~~~g~L~~~i~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~ 183 (340)
T PTZ00426 110 LEFVIGGEFFTFLRRNK---RFPNDVGCFYAAQIVLIFEYLQSLN---IVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT 183 (340)
T ss_pred EeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCCCCEEEecCCCCeecCC
Confidence 99999999999987653 5888999999999999999999988 99999999999999999999999999987643
Q ss_pred CCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHH--HHHhhcCccccccCCCCC
Q 003703 607 DTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEV--RRAVSCGKLSSILDPLAG 684 (801)
Q Consensus 607 ~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~--~~~~~~g~~~~~~d~~~~ 684 (801)
. .....||+.|+|||++.+..++.++|||||||++|||+||.+||...... ...+..+..
T Consensus 184 ~---------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~--------- 245 (340)
T PTZ00426 184 R---------TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGII--------- 245 (340)
T ss_pred C---------cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCC---------
Confidence 2 13457999999999999889999999999999999999999999754432 222322221
Q ss_pred CCCHHHHHHHHHHHHHhhhhCCCCCCC
Q 003703 685 DWPTFVARRLVDLGLQCCELYGRERPD 711 (801)
Q Consensus 685 ~~~~~~~~~l~~Li~~Cl~~dP~~RPt 711 (801)
.+|...+..+.+++.+|++.||.+|++
T Consensus 246 ~~p~~~~~~~~~li~~~l~~dp~~R~~ 272 (340)
T PTZ00426 246 YFPKFLDNNCKHLMKKLLSHDLTKRYG 272 (340)
T ss_pred CCCCCCCHHHHHHHHHHcccCHHHcCC
Confidence 233445567889999999999999963
No 49
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=9e-37 Score=343.33 Aligned_cols=255 Identities=26% Similarity=0.406 Sum_probs=203.4
Q ss_pred HhcCccccceeeecCceEEEEEEEC-------CeEEEEEEeccCCcc-cHHHHHHHHHHHhcCC-CCceeeEeccccC--
Q 003703 453 ATCNFSESFKVGQGGFGCVYKGEML-------GRTVAIKMLYSHNMQ-GQLEFQQEVRVLSKLQ-HPHLVTLLGACPE-- 521 (801)
Q Consensus 453 at~~f~~~~~LG~G~fG~Vy~g~~~-------g~~vAiK~l~~~~~~-~~~~f~~E~~il~~l~-HpnIV~l~g~~~~-- 521 (801)
..++|...+.||+|+||.||+|+.. +..||||++...... ....|.+|+.+|.++. |||||+++|+|.+
T Consensus 35 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~ 114 (400)
T cd05105 35 PRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSG 114 (400)
T ss_pred cccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCC
Confidence 3567888899999999999999863 246999999754332 3456899999999996 9999999999954
Q ss_pred CcceeeecCCCCchhhhhhhcCC---------------------------------------------------------
Q 003703 522 AWSLVYEYLPNGSLQDRLFRKSN--------------------------------------------------------- 544 (801)
Q Consensus 522 ~~~LV~E~~~~gsL~~~L~~~~~--------------------------------------------------------- 544 (801)
..+|||||+++|+|.++|.....
T Consensus 115 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (400)
T cd05105 115 PIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEI 194 (400)
T ss_pred ceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhh
Confidence 47899999999999998865310
Q ss_pred ------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeec
Q 003703 545 ------------------------------------VSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLD 588 (801)
Q Consensus 545 ------------------------------------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd 588 (801)
...+++..++.++.||+.||.|||+.+ |+||||||+|||++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivH~dikp~Nill~ 271 (400)
T cd05105 195 KEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKN---CVHRDLAARNVLLA 271 (400)
T ss_pred hhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChHhEEEe
Confidence 124788999999999999999999987 99999999999999
Q ss_pred CCCCeeeecccceeeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChh---
Q 003703 589 SELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAG--- 664 (801)
Q Consensus 589 ~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~--- 664 (801)
.++.+||+|||+++........ .......+++.|+|||++.+..++.++|||||||++|||++ |..||....
T Consensus 272 ~~~~~kL~DfGla~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~ 347 (400)
T cd05105 272 QGKIVKICDFGLARDIMHDSNY----VSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDS 347 (400)
T ss_pred CCCEEEEEeCCcceeccccccc----cccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhH
Confidence 9999999999999876433211 12234457889999999998999999999999999999997 999986321
Q ss_pred HHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHHh
Q 003703 665 EVRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 723 (801)
Q Consensus 665 ~~~~~~~~g~~~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~l 723 (801)
.....+..+.. ...+...+..+.+|+.+||+.+|.+||++. .|.+.|+.+
T Consensus 348 ~~~~~~~~~~~--------~~~~~~~~~~l~~li~~cl~~dP~~RPt~~-~l~~~l~~l 397 (400)
T cd05105 348 TFYNKIKSGYR--------MAKPDHATQEVYDIMVKCWNSEPEKRPSFL-HLSDIVESL 397 (400)
T ss_pred HHHHHHhcCCC--------CCCCccCCHHHHHHHHHHCccCHhHCcCHH-HHHHHHHHH
Confidence 22222222211 112233556889999999999999999998 788888865
No 50
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=7.8e-37 Score=328.28 Aligned_cols=249 Identities=27% Similarity=0.396 Sum_probs=190.4
Q ss_pred CccccceeeecCceEEEEEEEC---CeEEEEEEeccCCcc--cHHHHHHHHHHHhcC---CCCceeeEecccc-------
Q 003703 456 NFSESFKVGQGGFGCVYKGEML---GRTVAIKMLYSHNMQ--GQLEFQQEVRVLSKL---QHPHLVTLLGACP------- 520 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~---g~~vAiK~l~~~~~~--~~~~f~~E~~il~~l---~HpnIV~l~g~~~------- 520 (801)
+|.....||+|+||.||+|+.. |..||+|++...... ....+.+|+.++..+ +||||++++++|.
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~ 81 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE 81 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence 5778889999999999999873 678999998654322 233566788777766 6999999999873
Q ss_pred CCcceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccc
Q 003703 521 EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGI 600 (801)
Q Consensus 521 ~~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGl 600 (801)
...++||||++ ++|.+++..... ..+++..+..|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 82 ~~~~lv~e~~~-~~l~~~~~~~~~-~~~~~~~~~~i~~qi~~aL~~lH~~~---iiH~dlkp~Nil~~~~~~~kl~Dfg~ 156 (290)
T cd07862 82 TKLTLVFEHVD-QDLTTYLDKVPE-PGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGL 156 (290)
T ss_pred CcEEEEEccCC-CCHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEcCCCCEEEccccc
Confidence 23689999996 689888865432 45889999999999999999999988 99999999999999999999999999
Q ss_pred eeeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHH---HHhhc-C---
Q 003703 601 CRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVR---RAVSC-G--- 673 (801)
Q Consensus 601 a~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~---~~~~~-g--- 673 (801)
++...... ......||+.|+|||++....++.++|||||||++|||++|++||....... ..+.. +
T Consensus 157 ~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~ 229 (290)
T cd07862 157 ARIYSFQM-------ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPG 229 (290)
T ss_pred eEeccCCc-------ccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCC
Confidence 98764331 2345579999999999988899999999999999999999999997443221 11110 0
Q ss_pred --ccc-------cccCCCCC----CCCHHHHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 674 --KLS-------SILDPLAG----DWPTFVARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 674 --~~~-------~~~d~~~~----~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
.+. ..+.+... .+....+..+.+|+.+||+.||++||++.+.+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l 285 (290)
T cd07862 230 EEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL 285 (290)
T ss_pred hhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHh
Confidence 000 00000000 01112455778999999999999999998544
No 51
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=8.1e-37 Score=335.50 Aligned_cols=252 Identities=24% Similarity=0.341 Sum_probs=191.6
Q ss_pred CccccceeeecCceEEEEEEEC--CeEEEEEEeccCC--cccHHHHHHHHHHHhcCCCCceeeEeccccC-------Ccc
Q 003703 456 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHN--MQGQLEFQQEVRVLSKLQHPHLVTLLGACPE-------AWS 524 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~--~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~-------~~~ 524 (801)
+|...++||+|+||.||+|+.. |..||||++.... ......+.+|+.+++.++||||+++++++.. ..+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 4677889999999999999875 8899999986432 2233468899999999999999999988721 268
Q ss_pred eeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeec
Q 003703 525 LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLV 604 (801)
Q Consensus 525 LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~ 604 (801)
+||||+. ++|.+++... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 81 lv~e~~~-~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~ 153 (338)
T cd07859 81 VVFELME-SDLHQVIKAN---DDLTPEHHQFFLYQLLRALKYIHTAN---VFHRDLKPKNILANADCKLKICDFGLARVA 153 (338)
T ss_pred EEEecCC-CCHHHHHHhc---ccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCcEEEccCcccccc
Confidence 9999994 6898888654 35889999999999999999999988 999999999999999999999999999865
Q ss_pred cCCCCcCCCccccCCCCCCCCCCCcccccc--CCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHH--------------
Q 003703 605 TEDTLYLPSFHRSTAPKGSFPYADPEYHRT--GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRR-------------- 668 (801)
Q Consensus 605 ~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~--~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~-------------- 668 (801)
...... ........||+.|+|||++.+ ..++.++|||||||++|||+||++||........
T Consensus 154 ~~~~~~---~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 230 (338)
T cd07859 154 FNDTPT---AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPE 230 (338)
T ss_pred ccccCc---cccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHH
Confidence 332211 011245679999999999865 6789999999999999999999999964332111
Q ss_pred ---HhhcCccccccC----CCC----CCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHH
Q 003703 669 ---AVSCGKLSSILD----PLA----GDWPTFVARRLVDLGLQCCELYGRERPDITPSLVK 718 (801)
Q Consensus 669 ---~~~~g~~~~~~d----~~~----~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~ 718 (801)
.+........+. ... ..++ ..+..+.+++.+||+.||.+||++.+.+.+
T Consensus 231 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 231 TISRVRNEKARRYLSSMRKKQPVPFSQKFP-NADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred HHHHhhhhhHHHHHHhhcccCCCchHHhcC-CCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 000000000000 000 0011 134567899999999999999999865543
No 52
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=1.3e-36 Score=321.30 Aligned_cols=249 Identities=28% Similarity=0.454 Sum_probs=201.0
Q ss_pred cCccccceeeecCceEEEEEEEC-CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccccC--CcceeeecCC
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML-GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYLP 531 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~-g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E~~~ 531 (801)
++|...++||+|+||.||+|... +..||+|.+..... ....+.+|+.++..++||||+++++++.+ ..+++|||++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 84 (261)
T cd05072 6 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTM-SVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMA 84 (261)
T ss_pred HHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCch-hHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCC
Confidence 46778889999999999999875 67899999865433 34578899999999999999999988743 4789999999
Q ss_pred CCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcC
Q 003703 532 NGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYL 611 (801)
Q Consensus 532 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~ 611 (801)
+|+|.+++.... ...+++..++.++.+++.||.|||+.+ ++||||||+||+++.++.+||+|||++.........
T Consensus 85 ~~~L~~~l~~~~-~~~~~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~- 159 (261)
T cd05072 85 KGSLLDFLKSDE-GGKVLLPKLIDFSAQIAEGMAYIERKN---YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYT- 159 (261)
T ss_pred CCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEecCCCcEEECCCccceecCCCcee-
Confidence 999999986543 246889999999999999999999987 999999999999999999999999999876543211
Q ss_pred CCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChh--HHHHHhhcCccccccCCCCCCCCH
Q 003703 612 PSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAG--EVRRAVSCGKLSSILDPLAGDWPT 688 (801)
Q Consensus 612 ~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~--~~~~~~~~g~~~~~~d~~~~~~~~ 688 (801)
......++..|+|||++..+.++.++|||||||++|+|+| |..||.... .....+..+... +.. .
T Consensus 160 ----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~----~~~----~ 227 (261)
T cd05072 160 ----AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYRM----PRM----E 227 (261)
T ss_pred ----ccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCC----CCC----C
Confidence 1223456788999999988899999999999999999998 999996432 222333222111 111 1
Q ss_pred HHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHH
Q 003703 689 FVARRLVDLGLQCCELYGRERPDITPSLVKELEQ 722 (801)
Q Consensus 689 ~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~ 722 (801)
..+..+.+++.+||..+|.+||++. ++...|+.
T Consensus 228 ~~~~~~~~li~~~l~~~p~~Rp~~~-~i~~~l~~ 260 (261)
T cd05072 228 NCPDELYDIMKTCWKEKAEERPTFD-YLQSVLDD 260 (261)
T ss_pred CCCHHHHHHHHHHccCCcccCcCHH-HHHHHHhc
Confidence 2445788999999999999999998 78888774
No 53
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-37 Score=344.16 Aligned_cols=252 Identities=29% Similarity=0.473 Sum_probs=204.5
Q ss_pred CccccceeeecCceEEEEEEEC---C--eE-EEEEEeccC---CcccHHHHHHHHHHHhcCCCCceeeEecccc--CCcc
Q 003703 456 NFSESFKVGQGGFGCVYKGEML---G--RT-VAIKMLYSH---NMQGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWS 524 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~---g--~~-vAiK~l~~~---~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~ 524 (801)
+....++||+|+||.||+|++. + .. ||||..+.. ......+|.+|.++|++++|||||+|||++. +..+
T Consensus 158 ~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~ 237 (474)
T KOG0194|consen 158 DIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLM 237 (474)
T ss_pred CccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccE
Confidence 3344478999999999999885 2 23 899998753 2355678999999999999999999999984 4588
Q ss_pred eeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeec
Q 003703 525 LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLV 604 (801)
Q Consensus 525 LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~ 604 (801)
||||+|+||+|.++|..... .++..++++++.+.|.||+|||+.+ +|||||-..|+|++.++.+||+|||+++..
T Consensus 238 ivmEl~~gGsL~~~L~k~~~--~v~~~ek~~~~~~AA~Gl~YLh~k~---~IHRDIAARNcL~~~~~~vKISDFGLs~~~ 312 (474)
T KOG0194|consen 238 LVMELCNGGSLDDYLKKNKK--SLPTLEKLRFCYDAARGLEYLHSKN---CIHRDIAARNCLYSKKGVVKISDFGLSRAG 312 (474)
T ss_pred EEEEecCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHhHHHHHHHCC---CcchhHhHHHheecCCCeEEeCccccccCC
Confidence 99999999999999987653 6899999999999999999999988 999999999999999999999999998765
Q ss_pred cCCCCcCCCccccC-CCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChhH--HHHHh-hcCcccccc
Q 003703 605 TEDTLYLPSFHRST-APKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAV-SCGKLSSIL 679 (801)
Q Consensus 605 ~~~~~~~~~~~~~~-~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~~--~~~~~-~~g~~~~~~ 679 (801)
..-. ... ...-...|+|||.+..+.|++++|||||||++||+++ |..||..... +...+ ..+...
T Consensus 313 ~~~~-------~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~--- 382 (474)
T KOG0194|consen 313 SQYV-------MKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRM--- 382 (474)
T ss_pred ccee-------eccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccC---
Confidence 3111 111 2234568999999999999999999999999999999 8889975543 44444 233222
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHHhhhccc
Q 003703 680 DPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHVAEE 728 (801)
Q Consensus 680 d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~l~~~~~ 728 (801)
..|...+..+..++.+||..+|.+||+|. .+.+.|+.+.....
T Consensus 383 -----~~~~~~p~~~~~~~~~c~~~~p~~R~tm~-~i~~~l~~~~~~~~ 425 (474)
T KOG0194|consen 383 -----PIPSKTPKELAKVMKQCWKKDPEDRPTMS-TIKKKLEALEKKKE 425 (474)
T ss_pred -----CCCCCCHHHHHHHHHHhccCChhhccCHH-HHHHHHHHHHhccc
Confidence 22334567888899999999999999999 78888887755433
No 54
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=7.5e-37 Score=333.73 Aligned_cols=234 Identities=27% Similarity=0.374 Sum_probs=188.0
Q ss_pred eeeecCceEEEEEEEC--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcC-CCCceeeEecccc--CCcceeeecCCCC
Q 003703 462 KVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKL-QHPHLVTLLGACP--EAWSLVYEYLPNG 533 (801)
Q Consensus 462 ~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~---~~~~~f~~E~~il~~l-~HpnIV~l~g~~~--~~~~LV~E~~~~g 533 (801)
.||+|+||.||+|... +..||||+++.... .....+..|..++..+ +||||+++++++. +..++||||+++|
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~gg 81 (316)
T cd05592 2 VLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNGG 81 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence 6999999999999885 67899999975422 2233456677777654 8999999999874 3578999999999
Q ss_pred chhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCCC
Q 003703 534 SLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPS 613 (801)
Q Consensus 534 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~~ 613 (801)
+|.+++.... .++...+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 82 ~L~~~~~~~~---~~~~~~~~~~~~qi~~al~~LH~~~---ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~----- 150 (316)
T cd05592 82 DLMFHIQSSG---RFDEARARFYAAEIICGLQFLHKKG---IIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE----- 150 (316)
T ss_pred cHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC-----
Confidence 9999886543 5788999999999999999999987 9999999999999999999999999998653322
Q ss_pred ccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhH--HHHHhhcCccccccCCCCCCCCHHHH
Q 003703 614 FHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWPTFVA 691 (801)
Q Consensus 614 ~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~--~~~~~~~g~~~~~~d~~~~~~~~~~~ 691 (801)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||...+. +...+... ...++...+
T Consensus 151 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~---------~~~~~~~~~ 220 (316)
T cd05592 151 -GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILND---------RPHFPRWIS 220 (316)
T ss_pred -CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC---------CCCCCCCCC
Confidence 123455799999999999999999999999999999999999999975432 22222111 112334456
Q ss_pred HHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 692 RRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 692 ~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
..+.+|+.+||+.||.+||++.+.+
T Consensus 221 ~~~~~ll~~~l~~~P~~R~~~~~~l 245 (316)
T cd05592 221 KEAKDCLSKLFERDPTKRLGVDGDI 245 (316)
T ss_pred HHHHHHHHHHccCCHHHcCCChHHH
Confidence 6788999999999999999986444
No 55
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.1e-36 Score=351.82 Aligned_cols=256 Identities=21% Similarity=0.280 Sum_probs=205.4
Q ss_pred HHHHHHhcCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEeccccC--
Q 003703 448 ADLQTATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACPE-- 521 (801)
Q Consensus 448 ~el~~at~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~--~~~~~f~~E~~il~~l~HpnIV~l~g~~~~-- 521 (801)
.+.....++|...+.||+|+||.||+++.. |..||||++..... .....+.+|+.++..++|+||++++..+..
T Consensus 25 ~~~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~ 104 (496)
T PTZ00283 25 ATAKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKD 104 (496)
T ss_pred ccccccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceeccc
Confidence 344555689999999999999999999874 89999999876533 334468899999999999999999876521
Q ss_pred --------CcceeeecCCCCchhhhhhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCC
Q 003703 522 --------AWSLVYEYLPNGSLQDRLFRKS-NVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELS 592 (801)
Q Consensus 522 --------~~~LV~E~~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~ 592 (801)
..++||||+++|+|.++|.... ....+++..+..|+.|++.||.|||+.+ |+||||||+||||+.++.
T Consensus 105 ~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~---IiHrDLKP~NILl~~~~~ 181 (496)
T PTZ00283 105 PRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKH---MIHRDIKSANILLCSNGL 181 (496)
T ss_pred ccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEeCCCC
Confidence 1468999999999999886542 3356889999999999999999999987 999999999999999999
Q ss_pred eeeecccceeeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhH--HHHHh
Q 003703 593 SKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAV 670 (801)
Q Consensus 593 vKL~DFGla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~--~~~~~ 670 (801)
+||+|||+++.+...... .......||+.|+|||++.+..++.++|||||||+||||++|+.||..... +...+
T Consensus 182 vkL~DFGls~~~~~~~~~----~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~ 257 (496)
T PTZ00283 182 VKLGDFGFSKMYAATVSD----DVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKT 257 (496)
T ss_pred EEEEecccCeeccccccc----cccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence 999999999876432211 123456799999999999999999999999999999999999999974332 22222
Q ss_pred hcCccccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHH
Q 003703 671 SCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVK 718 (801)
Q Consensus 671 ~~g~~~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~ 718 (801)
..+... ..+...+..+.+|+.+||+.||.+||++.+.+.+
T Consensus 258 ~~~~~~--------~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 258 LAGRYD--------PLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred hcCCCC--------CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 222211 1233455689999999999999999999965544
No 56
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=4.5e-37 Score=307.86 Aligned_cols=249 Identities=26% Similarity=0.370 Sum_probs=198.3
Q ss_pred CccccceeeecCceEEEEEEEC--CeEEEEEEeccCCccc--HHHHHHHHHHHhcCCCCceeeEeccccC--Ccceeeec
Q 003703 456 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQG--QLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEY 529 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~--~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E~ 529 (801)
+|...++||+|.||.||+|++. |+.||||+++.....+ .....+|+..|+.++|+||+.|+++|++ ...||+||
T Consensus 3 rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEf 82 (318)
T KOG0659|consen 3 RYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEF 82 (318)
T ss_pred hhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEe
Confidence 4666678999999999999885 8999999997664432 2346799999999999999999999965 57799999
Q ss_pred CCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCC
Q 003703 530 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTL 609 (801)
Q Consensus 530 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~ 609 (801)
|+ .+|+..+..+. ..|+-..+..++.+++.||+|||.+. |+||||||.|+|++.+|.+||+|||+|+.+.....
T Consensus 83 m~-tdLe~vIkd~~--i~l~pa~iK~y~~m~LkGl~y~H~~~---IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~ 156 (318)
T KOG0659|consen 83 MP-TDLEVVIKDKN--IILSPADIKSYMLMTLKGLAYCHSKW---ILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNR 156 (318)
T ss_pred cc-ccHHHHhcccc--cccCHHHHHHHHHHHHHHHHHHHhhh---hhcccCCccceEEcCCCcEEeecccchhccCCCCc
Confidence 95 68999997655 46888899999999999999999988 99999999999999999999999999999875432
Q ss_pred cCCCccccCCCCCCCCCCCcccccc-CCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhhc----C--c------cc
Q 003703 610 YLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSC----G--K------LS 676 (801)
Q Consensus 610 ~~~~~~~~~~~~Gt~~Y~APE~~~~-~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~----g--~------~~ 676 (801)
..+..+-|-.|.|||.+.+ ..|+..+|+||.|||+.||+.|.+-|....++.++... | . +.
T Consensus 157 ------~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~ 230 (318)
T KOG0659|consen 157 ------IQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMT 230 (318)
T ss_pred ------ccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCcccc
Confidence 2233378899999997655 57999999999999999999999888765554433111 1 1 11
Q ss_pred cccC---------CCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 677 SILD---------PLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 677 ~~~d---------~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
.+.| +.....-...+....+|+..++..||.+|++..+.+
T Consensus 231 ~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL 279 (318)
T KOG0659|consen 231 SLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQAL 279 (318)
T ss_pred ccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHh
Confidence 1111 111112233556789999999999999999998544
No 57
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=1.2e-36 Score=324.70 Aligned_cols=253 Identities=29% Similarity=0.463 Sum_probs=199.9
Q ss_pred HhcCccccceeeecCceEEEEEEEC-------CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEeccccC--C
Q 003703 453 ATCNFSESFKVGQGGFGCVYKGEML-------GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--A 522 (801)
Q Consensus 453 at~~f~~~~~LG~G~fG~Vy~g~~~-------g~~vAiK~l~~~~~-~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~ 522 (801)
.+++|.....||+|+||.||+|.+. +..||||++..... .....|.+|+.++..++||||++++++|.+ .
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~ 83 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 83 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 4677889999999999999999764 35799999865432 334568899999999999999999999854 4
Q ss_pred cceeeecCCCCchhhhhhhcCC-------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeee
Q 003703 523 WSLVYEYLPNGSLQDRLFRKSN-------VSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKI 595 (801)
Q Consensus 523 ~~LV~E~~~~gsL~~~L~~~~~-------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL 595 (801)
.++||||+++|+|.+++..... ...++|..++.++.|++.||.|||+.+ ++|+||||+|||++.++.+||
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---~vH~dlkp~Nil~~~~~~~~l 160 (277)
T cd05062 84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKI 160 (277)
T ss_pred eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCcchheEEEcCCCCEEE
Confidence 7899999999999999865321 234688999999999999999999987 999999999999999999999
Q ss_pred ecccceeeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChhH--HHHHhhc
Q 003703 596 CDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSC 672 (801)
Q Consensus 596 ~DFGla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~~--~~~~~~~ 672 (801)
+|||+++........ .......+++.|+|||++.++.++.++|||||||++|||++ |..||..... ....+..
T Consensus 161 ~dfg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~ 236 (277)
T cd05062 161 GDFGMTRDIYETDYY----RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVME 236 (277)
T ss_pred CCCCCccccCCccee----ecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc
Confidence 999999865433211 11223456788999999998899999999999999999999 7889864332 2222222
Q ss_pred CccccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHH
Q 003703 673 GKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELE 721 (801)
Q Consensus 673 g~~~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~ 721 (801)
+... ..+...+..+.+++.+||+.+|.+||++. +++..|+
T Consensus 237 ~~~~--------~~~~~~~~~~~~li~~~l~~~p~~Rps~~-e~l~~l~ 276 (277)
T cd05062 237 GGLL--------DKPDNCPDMLFELMRMCWQYNPKMRPSFL-EIISSIK 276 (277)
T ss_pred CCcC--------CCCCCCCHHHHHHHHHHcCCChhhCcCHH-HHHHHhh
Confidence 2221 12233456789999999999999999998 5555554
No 58
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.7e-37 Score=321.89 Aligned_cols=238 Identities=26% Similarity=0.407 Sum_probs=204.8
Q ss_pred hcCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcccHH---HHHHHHHHHhcCCCCceeeEeccccC--Cccee
Q 003703 454 TCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQL---EFQQEVRVLSKLQHPHLVTLLGACPE--AWSLV 526 (801)
Q Consensus 454 t~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~~~---~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV 526 (801)
..+|...+.||+|.||.|-++... |+.||||.++++...+.. .+.+|++||+.|+||||+.+|.+|.. ...||
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIviv 131 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIV 131 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEE
Confidence 356777788999999999999763 999999999888765543 57899999999999999999999954 57899
Q ss_pred eecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccC
Q 003703 527 YEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTE 606 (801)
Q Consensus 527 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~ 606 (801)
|||..+|.|+|++..++ .|+..+...|+.||..|+.|+|.++ ++|||||.+|||||.|+++||+||||+.++..
T Consensus 132 MEYaS~GeLYDYiSer~---~LsErEaRhfFRQIvSAVhYCHknr---VvHRDLKLENILLD~N~NiKIADFGLSNly~~ 205 (668)
T KOG0611|consen 132 MEYASGGELYDYISERG---SLSEREARHFFRQIVSAVHYCHKNR---VVHRDLKLENILLDQNNNIKIADFGLSNLYAD 205 (668)
T ss_pred EEecCCccHHHHHHHhc---cccHHHHHHHHHHHHHHHHHHhhcc---ceecccchhheeecCCCCeeeeccchhhhhcc
Confidence 99999999999998775 5888999999999999999999988 99999999999999999999999999998866
Q ss_pred CCCcCCCccccCCCCCCCCCCCccccccCCC-CcchhHHhHHHHHHHHHhCCCCCCChhH--HHHHhhcCccccccCCCC
Q 003703 607 DTLYLPSFHRSTAPKGSFPYADPEYHRTGVL-TPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILDPLA 683 (801)
Q Consensus 607 ~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~-s~ksDVwSlGvvL~ELltG~~Pf~~~~~--~~~~~~~g~~~~~~d~~~ 683 (801)
.. ...+++|+|.|.+||++.+.+| ++.+|-|||||+||-|+.|..||+..+. +-..+..|.+.+.-
T Consensus 206 ~k-------fLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYrEP~---- 274 (668)
T KOG0611|consen 206 KK-------FLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYREPE---- 274 (668)
T ss_pred cc-------HHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccccCCC----
Confidence 54 2357799999999999999988 5899999999999999999999986553 33456666554422
Q ss_pred CCCCHHHHHHHHHHHHHhhhhCCCCCCCchH
Q 003703 684 GDWPTFVARRLVDLGLQCCELYGRERPDITP 714 (801)
Q Consensus 684 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e 714 (801)
.+....-||.+||-.||.+|.|+.+
T Consensus 275 ------~PSdA~gLIRwmLmVNP~RRATieD 299 (668)
T KOG0611|consen 275 ------TPSDASGLIRWMLMVNPERRATIED 299 (668)
T ss_pred ------CCchHHHHHHHHHhcCcccchhHHH
Confidence 2235667999999999999999874
No 59
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=1.4e-36 Score=320.30 Aligned_cols=246 Identities=26% Similarity=0.465 Sum_probs=196.9
Q ss_pred cCccccceeeecCceEEEEEEEC-CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccccC--CcceeeecCC
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML-GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYLP 531 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~-g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E~~~ 531 (801)
++|...+.||+|+||.||++.+. +..+|+|.+.... .....|.+|+.+|.+++||||++++++|.+ ..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~ 82 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME 82 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence 34667788999999999999886 5689999886443 234578899999999999999999999854 4789999999
Q ss_pred CCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcC
Q 003703 532 NGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYL 611 (801)
Q Consensus 532 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~ 611 (801)
+|+|.+++.... ..++|..+..++.+++.||.|||+.+ |+||||||+||+++.++.+||+|||+++........
T Consensus 83 ~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~- 156 (256)
T cd05114 83 NGCLLNYLRQRQ--GKLSKDMLLSMCQDVCEGMEYLERNS---FIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYT- 156 (256)
T ss_pred CCcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccCcceEEEcCCCeEEECCCCCccccCCCcee-
Confidence 999999886543 35889999999999999999999987 999999999999999999999999999865432211
Q ss_pred CCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChhH--HHHHhhcCccccccCCCCCCCCH
Q 003703 612 PSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWPT 688 (801)
Q Consensus 612 ~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~~--~~~~~~~g~~~~~~d~~~~~~~~ 688 (801)
......++..|+|||++.+..++.++||||||+++|||++ |+.||..... ....+..+.. . ..+.
T Consensus 157 ----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~--~------~~~~ 224 (256)
T cd05114 157 ----SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFR--L------YRPK 224 (256)
T ss_pred ----ccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCC--C------CCCC
Confidence 1223346678999999988899999999999999999999 9999975432 2233333321 1 1122
Q ss_pred HHHHHHHHHHHHhhhhCCCCCCCchHHHHHHH
Q 003703 689 FVARRLVDLGLQCCELYGRERPDITPSLVKEL 720 (801)
Q Consensus 689 ~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L 720 (801)
..+..+.+|+.+||+.+|.+||++. +++..|
T Consensus 225 ~~~~~~~~li~~c~~~~p~~Rps~~-~l~~~l 255 (256)
T cd05114 225 LASMTVYEVMYSCWHEKPEGRPTFA-ELLRAI 255 (256)
T ss_pred CCCHHHHHHHHHHccCCcccCcCHH-HHHHhh
Confidence 2345789999999999999999998 555443
No 60
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=2.4e-36 Score=319.39 Aligned_cols=250 Identities=29% Similarity=0.455 Sum_probs=201.4
Q ss_pred hcCccccceeeecCceEEEEEEEC-CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccccC--CcceeeecC
Q 003703 454 TCNFSESFKVGQGGFGCVYKGEML-GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYL 530 (801)
Q Consensus 454 t~~f~~~~~LG~G~fG~Vy~g~~~-g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E~~ 530 (801)
+.+|...+.||+|+||.||+|.+. +..||+|.++.... ....|.+|+.++.+++||||+++++++.. ..++||||+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTM-DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELM 83 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcc-cHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecc
Confidence 456888889999999999999875 67899999876543 35578899999999999999999998854 478999999
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCc
Q 003703 531 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLY 610 (801)
Q Consensus 531 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~ 610 (801)
++++|.+++.... ...++|..+..++.+++.||.|||+.+ |+||||||+||+++.++.+||+|||+++........
T Consensus 84 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~ 159 (261)
T cd05068 84 KYGSLLEYLQGGA-GRALKLPQLIDMAAQVASGMAYLEAQN---YIHRDLAARNVLVGENNICKVADFGLARVIKEDIYE 159 (261)
T ss_pred cCCcHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCcceEEEcCCCCEEECCcceEEEccCCccc
Confidence 9999999986543 346899999999999999999999987 999999999999999999999999999887532211
Q ss_pred CCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChhH--HHHHhhcCccccccCCCCCCCC
Q 003703 611 LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWP 687 (801)
Q Consensus 611 ~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~~--~~~~~~~g~~~~~~d~~~~~~~ 687 (801)
......++..|+|||++.+..++.++||||||+++|||+| |+.||..... +...+..+.. ...+
T Consensus 160 -----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~--------~~~~ 226 (261)
T cd05068 160 -----AREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYR--------MPCP 226 (261)
T ss_pred -----ccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC--------CCCC
Confidence 1122233468999999998999999999999999999999 9999965332 2222222110 0112
Q ss_pred HHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHH
Q 003703 688 TFVARRLVDLGLQCCELYGRERPDITPSLVKELEQ 722 (801)
Q Consensus 688 ~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~ 722 (801)
...+..+.+++.+|++.+|.+||++. .+...|+.
T Consensus 227 ~~~~~~~~~li~~~l~~~P~~Rp~~~-~l~~~l~~ 260 (261)
T cd05068 227 PGCPKELYDIMLDCWKEDPDDRPTFE-TLQWKLED 260 (261)
T ss_pred CcCCHHHHHHHHHHhhcCcccCCCHH-HHHHHHhc
Confidence 23456889999999999999999999 67777764
No 61
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=3.5e-37 Score=326.38 Aligned_cols=244 Identities=37% Similarity=0.632 Sum_probs=191.0
Q ss_pred cceeeecCceEEEEEEEC------CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEeccccC--CcceeeecC
Q 003703 460 SFKVGQGGFGCVYKGEML------GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYL 530 (801)
Q Consensus 460 ~~~LG~G~fG~Vy~g~~~------g~~vAiK~l~~~~~-~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E~~ 530 (801)
...||.|.||.||+|.+. +..|+||.++.... .....|.+|+..+.+++||||++++|+|.. ..++||||+
T Consensus 4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~ 83 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYC 83 (259)
T ss_dssp EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--
T ss_pred eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccccc
Confidence 457999999999999987 68899999966433 335679999999999999999999999953 478999999
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCc
Q 003703 531 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLY 610 (801)
Q Consensus 531 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~ 610 (801)
++|+|.++|.... ...+++..++.|+.||+.||.|||+.+ ++|+||+|+|||++.++.+||+|||++.........
T Consensus 84 ~~g~L~~~L~~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~~---iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~ 159 (259)
T PF07714_consen 84 PGGSLDDYLKSKN-KEPLSEQQRLSIAIQIAEALSYLHSNN---IIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKY 159 (259)
T ss_dssp TTEBHHHHHHHTC-TTTSBHHHHHHHHHHHHHHHHHHHHTT---EEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSE
T ss_pred ccccccccccccc-ccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccc
Confidence 9999999998762 256899999999999999999999987 999999999999999999999999999887332211
Q ss_pred CCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChh--HHHHHhhcCccccccCCCCCCCC
Q 003703 611 LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAG--EVRRAVSCGKLSSILDPLAGDWP 687 (801)
Q Consensus 611 ~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~--~~~~~~~~g~~~~~~d~~~~~~~ 687 (801)
.......+...|+|||.+....++.++||||||+++|||+| |+.||.... .+...+..+... ..+
T Consensus 160 ----~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~~--------~~~ 227 (259)
T PF07714_consen 160 ----KNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQRL--------PIP 227 (259)
T ss_dssp ----EESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEET--------TSB
T ss_pred ----ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--------eec
Confidence 12334457788999999999999999999999999999999 789986432 222333333321 122
Q ss_pred HHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHH
Q 003703 688 TFVARRLVDLGLQCCELYGRERPDITPSLVKEL 720 (801)
Q Consensus 688 ~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L 720 (801)
...+..+.+++..||..+|.+||++. ++.+.|
T Consensus 228 ~~~~~~~~~li~~C~~~~p~~RPs~~-~i~~~L 259 (259)
T PF07714_consen 228 DNCPKDIYSLIQQCWSHDPEKRPSFQ-EILQEL 259 (259)
T ss_dssp TTSBHHHHHHHHHHT-SSGGGS--HH-HHHHHH
T ss_pred cchhHHHHHHHHHHcCCChhhCcCHH-HHHhcC
Confidence 23456788999999999999999999 555543
No 62
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=8.5e-37 Score=334.20 Aligned_cols=237 Identities=27% Similarity=0.342 Sum_probs=193.1
Q ss_pred CccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcC-CCCceeeEeccccC--Ccceee
Q 003703 456 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKL-QHPHLVTLLGACPE--AWSLVY 527 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~---~~~~~f~~E~~il~~l-~HpnIV~l~g~~~~--~~~LV~ 527 (801)
+|.....||+|+||.||+|... +..||||++..... .....+..|..++..+ +||+|+++++++.+ ..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 4777889999999999999886 67999999876432 2233466788888877 58999999988743 578999
Q ss_pred ecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCC
Q 003703 528 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 607 (801)
Q Consensus 528 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~ 607 (801)
||+++|+|.+.+.... .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 81 E~~~~g~L~~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~ 154 (323)
T cd05616 81 EYVNGGDLMYQIQQVG---RFKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENMWD 154 (323)
T ss_pred cCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---EEecCCCHHHeEECCCCcEEEccCCCceecCCC
Confidence 9999999999886543 5788999999999999999999987 999999999999999999999999999864322
Q ss_pred CCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhH--HHHHhhcCccccccCCCCCC
Q 003703 608 TLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILDPLAGD 685 (801)
Q Consensus 608 ~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~--~~~~~~~g~~~~~~d~~~~~ 685 (801)
.. ......||+.|+|||++.+..++.++|||||||++|||+||+.||..... ....+..+. ..
T Consensus 155 ~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~---------~~ 219 (323)
T cd05616 155 GV------TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHN---------VA 219 (323)
T ss_pred CC------ccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCC---------CC
Confidence 21 22356799999999999999999999999999999999999999975432 222222222 12
Q ss_pred CCHHHHHHHHHHHHHhhhhCCCCCCCch
Q 003703 686 WPTFVARRLVDLGLQCCELYGRERPDIT 713 (801)
Q Consensus 686 ~~~~~~~~l~~Li~~Cl~~dP~~RPt~~ 713 (801)
+|...+..+.+|+.+|++.+|.+|++..
T Consensus 220 ~p~~~s~~~~~li~~~l~~~p~~R~~~~ 247 (323)
T cd05616 220 YPKSMSKEAVAICKGLMTKHPGKRLGCG 247 (323)
T ss_pred CCCcCCHHHHHHHHHHcccCHHhcCCCC
Confidence 3445667889999999999999999864
No 63
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.1e-37 Score=326.97 Aligned_cols=254 Identities=24% Similarity=0.318 Sum_probs=196.4
Q ss_pred HhcCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcc--------------cHHHHHHHHHHHhcCCCCceeeEe
Q 003703 453 ATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ--------------GQLEFQQEVRVLSKLQHPHLVTLL 516 (801)
Q Consensus 453 at~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~--------------~~~~f~~E~~il~~l~HpnIV~l~ 516 (801)
.-+.|.....||+|.||.|-+|+.. ++.||||++.+.... ......+|+.||.+++|||||+|+
T Consensus 95 ~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~Li 174 (576)
T KOG0585|consen 95 QLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLI 174 (576)
T ss_pred ehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEE
Confidence 3477888889999999999999885 899999999654321 124578999999999999999999
Q ss_pred cccc----CCcceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCC
Q 003703 517 GACP----EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELS 592 (801)
Q Consensus 517 g~~~----~~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~ 592 (801)
.+.. +..|||+|||..|.+...-- ....++..++.+++.+++.||.|||.++ ||||||||+|+||+.+|+
T Consensus 175 EvLDDP~s~~~YlVley~s~G~v~w~p~---d~~els~~~Ar~ylrDvv~GLEYLH~Qg---iiHRDIKPsNLLl~~~g~ 248 (576)
T KOG0585|consen 175 EVLDDPESDKLYLVLEYCSKGEVKWCPP---DKPELSEQQARKYLRDVVLGLEYLHYQG---IIHRDIKPSNLLLSSDGT 248 (576)
T ss_pred EeecCcccCceEEEEEeccCCccccCCC---CcccccHHHHHHHHHHHHHHHHHHHhcC---eeccccchhheEEcCCCc
Confidence 9874 35899999999988754321 1123889999999999999999999998 999999999999999999
Q ss_pred eeeecccceeeccCCCCcCCCccccCCCCCCCCCCCccccccCC----CCcchhHHhHHHHHHHHHhCCCCCCChhHHHH
Q 003703 593 SKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGV----LTPKSDSYSFGLIILQLLTGRLPVGLAGEVRR 668 (801)
Q Consensus 593 vKL~DFGla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~----~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~ 668 (801)
+||+|||.+.....+.... ....-...+|||.|+|||...++. -+.+.||||+||+||-|+.|+.||.......
T Consensus 249 VKIsDFGVs~~~~~~~~~~-~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~- 326 (576)
T KOG0585|consen 249 VKISDFGVSNEFPQGSDEG-SDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELE- 326 (576)
T ss_pred EEeeccceeeecccCCccc-cHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHH-
Confidence 9999999998774332111 111223478999999999887633 3578999999999999999999996433321
Q ss_pred HhhcCccccccC-CCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHH
Q 003703 669 AVSCGKLSSILD-PLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKE 719 (801)
Q Consensus 669 ~~~~g~~~~~~d-~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~ 719 (801)
.. ..++. |..-.-..++.+.+.+|++++|.+||..|.++.+..++.
T Consensus 327 l~-----~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hp 373 (576)
T KOG0585|consen 327 LF-----DKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHP 373 (576)
T ss_pred HH-----HHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecc
Confidence 11 11111 111111124678899999999999999999998544443
No 64
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=3.4e-36 Score=322.14 Aligned_cols=251 Identities=26% Similarity=0.402 Sum_probs=198.5
Q ss_pred CccccceeeecCceEEEEEEEC--Ce----EEEEEEeccCCcc-cHHHHHHHHHHHhcCCCCceeeEeccccC-Ccceee
Q 003703 456 NFSESFKVGQGGFGCVYKGEML--GR----TVAIKMLYSHNMQ-GQLEFQQEVRVLSKLQHPHLVTLLGACPE-AWSLVY 527 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~--g~----~vAiK~l~~~~~~-~~~~f~~E~~il~~l~HpnIV~l~g~~~~-~~~LV~ 527 (801)
+|...+.||+|+||.||+|.+. |. .|++|.+...... ...++..|+.++..++||||++++|++.+ ..++++
T Consensus 8 ~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~~~~~~i~ 87 (279)
T cd05111 8 ELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPGASLQLVT 87 (279)
T ss_pred hceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECCCccEEEE
Confidence 5666778999999999999873 44 4788887543322 23467788889999999999999999854 467899
Q ss_pred ecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCC
Q 003703 528 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 607 (801)
Q Consensus 528 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~ 607 (801)
||+++|+|.+++.... ..++|..++.|+.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++.+...
T Consensus 88 e~~~~gsL~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~---iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~ 162 (279)
T cd05111 88 QLSPLGSLLDHVRQHR--DSLDPQRLLNWCVQIAKGMYYLEEHR---MVHRNLAARNILLKSDSIVQIADFGVADLLYPD 162 (279)
T ss_pred EeCCCCcHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHCC---EeccccCcceEEEcCCCcEEEcCCccceeccCC
Confidence 9999999999997644 46899999999999999999999987 999999999999999999999999999876533
Q ss_pred CCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChhH--HHHHhhcCccccccCCCCC
Q 003703 608 TLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKLSSILDPLAG 684 (801)
Q Consensus 608 ~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~~--~~~~~~~g~~~~~~d~~~~ 684 (801)
... .......|+..|++||++.++.++.++|||||||++|||+| |..||..... ....+..+.... .
T Consensus 163 ~~~----~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~--~---- 232 (279)
T cd05111 163 DKK----YFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKGERLA--Q---- 232 (279)
T ss_pred Ccc----cccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCC--C----
Confidence 211 11234567789999999998999999999999999999998 9999964332 233333332211 1
Q ss_pred CCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHHhh
Q 003703 685 DWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLH 724 (801)
Q Consensus 685 ~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~l~ 724 (801)
+......+..++.+||..+|..||++. ++.+.|..+.
T Consensus 233 --~~~~~~~~~~li~~c~~~~p~~Rps~~-el~~~l~~~~ 269 (279)
T cd05111 233 --PQICTIDVYMVMVKCWMIDENVRPTFK-ELANEFTRMA 269 (279)
T ss_pred --CCCCCHHHHHHHHHHcCCCcccCcCHH-HHHHHHHHHH
Confidence 111234678899999999999999998 6777777654
No 65
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=7.7e-37 Score=334.66 Aligned_cols=237 Identities=27% Similarity=0.375 Sum_probs=189.7
Q ss_pred ccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc---ccHHHHHHHHHHH---hcCCCCceeeEecccc--CCccee
Q 003703 457 FSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVL---SKLQHPHLVTLLGACP--EAWSLV 526 (801)
Q Consensus 457 f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~---~~~~~f~~E~~il---~~l~HpnIV~l~g~~~--~~~~LV 526 (801)
|...+.||+|+||.||+|... |..||||+++.... .....+.+|+.++ ..++||||+++++++. +..++|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 456678999999999999875 78999999975421 2233466666655 5678999999999884 357899
Q ss_pred eecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccC
Q 003703 527 YEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTE 606 (801)
Q Consensus 527 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~ 606 (801)
|||+++|+|...+.. ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 81 ~E~~~~~~L~~~~~~----~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~ 153 (324)
T cd05589 81 MEYAAGGDLMMHIHT----DVFSEPRAVFYAACVVLGLQYLHENK---IVYRDLKLDNLLLDTEGFVKIADFGLCKEGMG 153 (324)
T ss_pred EcCCCCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCCCcEEeCcccCCccCCC
Confidence 999999999887753 35899999999999999999999987 99999999999999999999999999875432
Q ss_pred CCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhH--HHHHhhcCccccccCCCCC
Q 003703 607 DTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILDPLAG 684 (801)
Q Consensus 607 ~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~--~~~~~~~g~~~~~~d~~~~ 684 (801)
.. .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... +...+..+..
T Consensus 154 ~~------~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~--------- 218 (324)
T cd05589 154 FG------DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEV--------- 218 (324)
T ss_pred CC------CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC---------
Confidence 21 122456799999999999999999999999999999999999999974332 2222222211
Q ss_pred CCCHHHHHHHHHHHHHhhhhCCCCCCCchHH
Q 003703 685 DWPTFVARRLVDLGLQCCELYGRERPDITPS 715 (801)
Q Consensus 685 ~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~ 715 (801)
.+|...+..+.+++.+||+.||.+||+..+.
T Consensus 219 ~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~ 249 (324)
T cd05589 219 RYPRFLSREAISIMRRLLRRNPERRLGSGEK 249 (324)
T ss_pred CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCC
Confidence 2333456778999999999999999976543
No 66
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=2.3e-36 Score=325.34 Aligned_cols=254 Identities=29% Similarity=0.472 Sum_probs=205.7
Q ss_pred CccccceeeecCceEEEEEEEC-------CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccccC--Cccee
Q 003703 456 NFSESFKVGQGGFGCVYKGEML-------GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLV 526 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~-------g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV 526 (801)
+|.....||+|+||.||+|... +..+++|.+..........|.+|+.++++++||||++++++|.+ ..++|
T Consensus 6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 85 (291)
T cd05094 6 DIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMV 85 (291)
T ss_pred HeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEEE
Confidence 4666778999999999999753 45699999876665556679999999999999999999999854 47899
Q ss_pred eecCCCCchhhhhhhcCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCe
Q 003703 527 YEYLPNGSLQDRLFRKSN-------------VSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSS 593 (801)
Q Consensus 527 ~E~~~~gsL~~~L~~~~~-------------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~v 593 (801)
|||+++++|.+++..... ...++|..++.++.+|+.||.|||+.+ |+||||||+|||++.++.+
T Consensus 86 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~Nil~~~~~~~ 162 (291)
T cd05094 86 FEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH---FVHRDLATRNCLVGANLLV 162 (291)
T ss_pred EecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccCcceEEEccCCcE
Confidence 999999999999875431 234899999999999999999999988 9999999999999999999
Q ss_pred eeecccceeeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChh--HHHHHh
Q 003703 594 KICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAG--EVRRAV 670 (801)
Q Consensus 594 KL~DFGla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~--~~~~~~ 670 (801)
+|+|||+++....... ........|++.|+|||++.+..++.++|||||||++|||+| |+.||.... .....+
T Consensus 163 ~l~dfg~a~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~ 238 (291)
T cd05094 163 KIGDFGMSRDVYSTDY----YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECI 238 (291)
T ss_pred EECCCCcccccCCCce----eecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence 9999999976543221 112234567889999999999999999999999999999999 999985432 233333
Q ss_pred hcCccccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHHhhh
Q 003703 671 SCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHV 725 (801)
Q Consensus 671 ~~g~~~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~l~~ 725 (801)
..+.... .+...+..+.+++.+||+.+|.+||++. .+.+.|+.+..
T Consensus 239 ~~~~~~~--------~~~~~~~~~~~li~~~l~~~P~~Rpt~~-~v~~~l~~~~~ 284 (291)
T cd05094 239 TQGRVLE--------RPRVCPKEVYDIMLGCWQREPQQRLNIK-EIYKILHALGK 284 (291)
T ss_pred hCCCCCC--------CCccCCHHHHHHHHHHcccChhhCcCHH-HHHHHHHHHHh
Confidence 3333221 1223456789999999999999999999 78888888744
No 67
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1e-36 Score=335.17 Aligned_cols=255 Identities=24% Similarity=0.376 Sum_probs=198.3
Q ss_pred hcCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEecccc--CCcceeee
Q 003703 454 TCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYE 528 (801)
Q Consensus 454 t~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~-~~~~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~LV~E 528 (801)
.++|...++||+|+||.||++.+. |..+|+|.+..... .....+.+|+.++..++|||||+++++|. +..++|||
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence 367888899999999999999886 78899998875432 23456889999999999999999999984 35789999
Q ss_pred cCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCC
Q 003703 529 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDT 608 (801)
Q Consensus 529 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~ 608 (801)
|+++|+|.+++.... .+++.....++.+++.||.|||+.+ +|+||||||+|||++.++.+||+|||++.......
T Consensus 84 ~~~~~~L~~~l~~~~---~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~ 158 (333)
T cd06650 84 HMDGGSLDQVLKKAG---RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM 158 (333)
T ss_pred cCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhc
Confidence 999999999986543 5788999999999999999999853 39999999999999999999999999987654321
Q ss_pred CcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhH--HHHHhh---cCccccc-----
Q 003703 609 LYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVS---CGKLSSI----- 678 (801)
Q Consensus 609 ~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~--~~~~~~---~g~~~~~----- 678 (801)
.....||+.|+|||++.+..++.++|||||||++|+|++|+.||..... ....+. .+.....
T Consensus 159 --------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (333)
T cd06650 159 --------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPR 230 (333)
T ss_pred --------cccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcc
Confidence 2344689999999999988999999999999999999999999964322 111110 0000000
Q ss_pred ------------------------cC----CCCCCCC-HHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHH
Q 003703 679 ------------------------LD----PLAGDWP-TFVARRLVDLGLQCCELYGRERPDITPSLVKELE 721 (801)
Q Consensus 679 ------------------------~d----~~~~~~~-~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~ 721 (801)
.+ ......+ ...+..+.+|+.+||+.||.+||++.+.+.+.+-
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~ 302 (333)
T cd06650 231 PRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFI 302 (333)
T ss_pred cCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHH
Confidence 00 0000000 0134578999999999999999999976655543
No 68
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=8.8e-37 Score=334.21 Aligned_cols=237 Identities=26% Similarity=0.338 Sum_probs=191.8
Q ss_pred CccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCC-ceeeEecccc--CCcceee
Q 003703 456 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHP-HLVTLLGACP--EAWSLVY 527 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~---~~~~~f~~E~~il~~l~Hp-nIV~l~g~~~--~~~~LV~ 527 (801)
+|...+.||+|+||.||+|+.. +..||||++..... .....+..|..++..+.|+ +|+++++++. +..++||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 4777889999999999999886 67899999875422 2344578899999999765 5788888774 4578999
Q ss_pred ecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCC
Q 003703 528 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 607 (801)
Q Consensus 528 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~ 607 (801)
||+++|+|.+++.... .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 81 E~~~~g~L~~~~~~~~---~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~ 154 (324)
T cd05587 81 EYVNGGDLMYHIQQVG---KFKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDAEGHIKIADFGMCKENIFG 154 (324)
T ss_pred cCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEEcCCCCEEEeecCcceecCCC
Confidence 9999999999886543 5788999999999999999999987 999999999999999999999999998753221
Q ss_pred CCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhH--HHHHhhcCccccccCCCCCC
Q 003703 608 TLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILDPLAGD 685 (801)
Q Consensus 608 ~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~--~~~~~~~g~~~~~~d~~~~~ 685 (801)
. .......||+.|+|||++.+..++.++|||||||++|||+||+.||..... ....+..+. ..
T Consensus 155 ~------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~---------~~ 219 (324)
T cd05587 155 G------KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHN---------VS 219 (324)
T ss_pred C------CceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC---------CC
Confidence 1 112345799999999999999999999999999999999999999974432 222222221 12
Q ss_pred CCHHHHHHHHHHHHHhhhhCCCCCCCch
Q 003703 686 WPTFVARRLVDLGLQCCELYGRERPDIT 713 (801)
Q Consensus 686 ~~~~~~~~l~~Li~~Cl~~dP~~RPt~~ 713 (801)
++...+..+.+++.+||..||.+||+..
T Consensus 220 ~~~~~~~~~~~li~~~l~~~P~~R~~~~ 247 (324)
T cd05587 220 YPKSLSKEAVSICKGLLTKHPAKRLGCG 247 (324)
T ss_pred CCCCCCHHHHHHHHHHhhcCHHHcCCCC
Confidence 3444567889999999999999999874
No 69
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=2.5e-36 Score=318.71 Aligned_cols=243 Identities=28% Similarity=0.469 Sum_probs=196.1
Q ss_pred eeeecCceEEEEEEE----CCeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEecccc-CCcceeeecCCCCc
Q 003703 462 KVGQGGFGCVYKGEM----LGRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACP-EAWSLVYEYLPNGS 534 (801)
Q Consensus 462 ~LG~G~fG~Vy~g~~----~g~~vAiK~l~~~~~--~~~~~f~~E~~il~~l~HpnIV~l~g~~~-~~~~LV~E~~~~gs 534 (801)
.||+|+||.||+|.+ .+..||+|++..... .....|.+|+.++..++||||++++|++. +..++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv~e~~~~~~ 81 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEAESWMLVMELAELGP 81 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCcEEEEecCCCCc
Confidence 589999999999975 268899999865433 23456889999999999999999999985 45789999999999
Q ss_pred hhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCCCc
Q 003703 535 LQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSF 614 (801)
Q Consensus 535 L~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~~~ 614 (801)
|.+++... ..+++..++.|+.|++.||.|||+.+ |+||||||.|||++.++.+||+|||+++.........
T Consensus 82 L~~~l~~~---~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~--- 152 (257)
T cd05116 82 LNKFLQKN---KHVTEKNITELVHQVSMGMKYLEETN---FVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYY--- 152 (257)
T ss_pred HHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccchhhEEEcCCCeEEECCCccccccCCCCCee---
Confidence 99998654 35889999999999999999999987 9999999999999999999999999998765332110
Q ss_pred cccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChh--HHHHHhhcCccccccCCCCCCCCHHHH
Q 003703 615 HRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAG--EVRRAVSCGKLSSILDPLAGDWPTFVA 691 (801)
Q Consensus 615 ~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~--~~~~~~~~g~~~~~~d~~~~~~~~~~~ 691 (801)
.......+++.|+|||.+....++.++|||||||++|||++ |.+||.... .+...+..+.. ...|...+
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~--------~~~~~~~~ 224 (257)
T cd05116 153 KAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGER--------MECPQRCP 224 (257)
T ss_pred eecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCC--------CCCCCCCC
Confidence 11223345689999999988889999999999999999998 999997432 23333333321 12233455
Q ss_pred HHHHHHHHHhhhhCCCCCCCchHHHHHHHHH
Q 003703 692 RRLVDLGLQCCELYGRERPDITPSLVKELEQ 722 (801)
Q Consensus 692 ~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~ 722 (801)
..+.+|+.+||+.||.+||++. .|++.|+.
T Consensus 225 ~~l~~li~~~~~~~p~~Rp~~~-~i~~~l~~ 254 (257)
T cd05116 225 PEMYDLMKLCWTYGVDERPGFA-VVELRLRN 254 (257)
T ss_pred HHHHHHHHHHhccCchhCcCHH-HHHHHHhc
Confidence 7889999999999999999998 78777764
No 70
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=1.6e-36 Score=328.69 Aligned_cols=251 Identities=22% Similarity=0.353 Sum_probs=191.3
Q ss_pred hcCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcc-cHHHHHHHHHHHhcCCCCceeeEecccc--CCcceeee
Q 003703 454 TCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ-GQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYE 528 (801)
Q Consensus 454 t~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~-~~~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~LV~E 528 (801)
.++|...+.||+|+||.||+|+.. |..||||++...... ....+.+|+.+++.++||||+++++++. +..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 357888899999999999999885 889999998754332 2345778999999999999999999884 35789999
Q ss_pred cCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCC
Q 003703 529 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDT 608 (801)
Q Consensus 529 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~ 608 (801)
|++ ++|.+++.... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 84 ~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 157 (303)
T cd07869 84 YVH-TDLCQYMDKHP--GGLHPENVKLFLFQLLRGLSYIHQRY---ILHRDLKPQNLLISDTGELKLADFGLARAKSVPS 157 (303)
T ss_pred CCC-cCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECCCCcceeccCCC
Confidence 995 67777775543 45788999999999999999999988 9999999999999999999999999997653221
Q ss_pred CcCCCccccCCCCCCCCCCCcccccc-CCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhh-----cCcc-----cc
Q 003703 609 LYLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVS-----CGKL-----SS 677 (801)
Q Consensus 609 ~~~~~~~~~~~~~Gt~~Y~APE~~~~-~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~-----~g~~-----~~ 677 (801)
.......||+.|+|||++.+ ..++.++|||||||++|+|+||+.||.........+. .+.. ..
T Consensus 158 ------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (303)
T cd07869 158 ------HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPG 231 (303)
T ss_pred ------ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccc
Confidence 11234568999999998765 4588999999999999999999999975433221110 0000 00
Q ss_pred -----ccCCC-CC-CCCH---------HHHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 678 -----ILDPL-AG-DWPT---------FVARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 678 -----~~d~~-~~-~~~~---------~~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
.+++. .. ..+. ..+..+.+|+.+|++.||.+|||+.+.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l 286 (303)
T cd07869 232 VHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAAL 286 (303)
T ss_pred hhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHh
Confidence 00000 00 0000 1224678999999999999999998544
No 71
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=1e-36 Score=333.68 Aligned_cols=230 Identities=27% Similarity=0.409 Sum_probs=187.7
Q ss_pred ceeeecCceEEEEEEE-----CCeEEEEEEeccCCc----ccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccceeeec
Q 003703 461 FKVGQGGFGCVYKGEM-----LGRTVAIKMLYSHNM----QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEY 529 (801)
Q Consensus 461 ~~LG~G~fG~Vy~g~~-----~g~~vAiK~l~~~~~----~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E~ 529 (801)
+.||+|+||.||+++. .+..||||++..... .....+.+|+.+|..++||||++++++|.. ..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 4799999999999975 378899999875322 223457789999999999999999998843 47899999
Q ss_pred CCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCC
Q 003703 530 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTL 609 (801)
Q Consensus 530 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~ 609 (801)
+++|+|.+++.... .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 82 ~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 155 (323)
T cd05584 82 LSGGELFMHLEREG---IFMEDTACFYLSEISLALEHLHQQG---IIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGT 155 (323)
T ss_pred CCCchHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEeeCcCCeecccCCC
Confidence 99999999886643 5778888999999999999999988 99999999999999999999999999875432221
Q ss_pred cCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHH--HHHhhcCccccccCCCCCCCC
Q 003703 610 YLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEV--RRAVSCGKLSSILDPLAGDWP 687 (801)
Q Consensus 610 ~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~--~~~~~~g~~~~~~d~~~~~~~ 687 (801)
......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ...+..+.. ..+
T Consensus 156 ------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~~---------~~~ 220 (323)
T cd05584 156 ------VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKL---------NLP 220 (323)
T ss_pred ------cccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC---------CCC
Confidence 123457999999999999889999999999999999999999999754432 222222221 233
Q ss_pred HHHHHHHHHHHHHhhhhCCCCCCC
Q 003703 688 TFVARRLVDLGLQCCELYGRERPD 711 (801)
Q Consensus 688 ~~~~~~l~~Li~~Cl~~dP~~RPt 711 (801)
...+..+.+|+.+||+.+|.+||+
T Consensus 221 ~~~~~~~~~li~~~l~~~p~~R~~ 244 (323)
T cd05584 221 PYLTPEARDLLKKLLKRNPSSRLG 244 (323)
T ss_pred CCCCHHHHHHHHHHcccCHhHcCC
Confidence 345668899999999999999994
No 72
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=9.7e-37 Score=327.53 Aligned_cols=242 Identities=25% Similarity=0.313 Sum_probs=195.3
Q ss_pred CccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcc---cHHHHHHHHHHHhcCCCCceeeEecccc--CCcceeee
Q 003703 456 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ---GQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYE 528 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~---~~~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~LV~E 528 (801)
+|...++||+|+||.||++... ++.||+|.+...... ....+.+|+.++..++||||+++++++. +..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 4677789999999999999874 889999998654332 2335778999999999999999999884 35889999
Q ss_pred cCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCC
Q 003703 529 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDT 608 (801)
Q Consensus 529 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~ 608 (801)
|+++|+|.+++.... ...+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 156 (285)
T cd05605 81 LMNGGDLKFHIYNMG-NPGFDEERAVFYAAEITCGLEDLHRER---IVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE 156 (285)
T ss_pred ccCCCcHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHEEECCCCCEEEeeCCCceecCCCC
Confidence 999999998886543 246899999999999999999999987 9999999999999999999999999998764322
Q ss_pred CcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHH--HHhhcCccccccCCCCCCC
Q 003703 609 LYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVR--RAVSCGKLSSILDPLAGDW 686 (801)
Q Consensus 609 ~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~--~~~~~g~~~~~~d~~~~~~ 686 (801)
......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ..+.. .+......+
T Consensus 157 -------~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~-----~~~~~~~~~ 224 (285)
T cd05605 157 -------TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVER-----RVKEDQEEY 224 (285)
T ss_pred -------ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHH-----Hhhhccccc
Confidence 1234478999999999998899999999999999999999999997433211 11110 011112234
Q ss_pred CHHHHHHHHHHHHHhhhhCCCCCCCch
Q 003703 687 PTFVARRLVDLGLQCCELYGRERPDIT 713 (801)
Q Consensus 687 ~~~~~~~l~~Li~~Cl~~dP~~RPt~~ 713 (801)
+...+..+.+|+.+||+.||.+||+..
T Consensus 225 ~~~~~~~~~~li~~~l~~~P~~R~~~~ 251 (285)
T cd05605 225 SEKFSEAARSICRQLLTKDPGFRLGCR 251 (285)
T ss_pred CcccCHHHHHHHHHHccCCHHHhcCCC
Confidence 445677899999999999999999544
No 73
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=2.2e-36 Score=320.26 Aligned_cols=249 Identities=27% Similarity=0.434 Sum_probs=200.8
Q ss_pred CccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccccC--CcceeeecCC
Q 003703 456 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYLP 531 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E~~~ 531 (801)
+|...+.||+|+||.||+|... +..||+|.+.... .....+.+|+.++..++||||++++++|.. ..++||||++
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (263)
T cd05052 7 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMT 85 (263)
T ss_pred HeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc-hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCC
Confidence 4677788999999999999875 7899999987543 335578899999999999999999999843 4779999999
Q ss_pred CCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcC
Q 003703 532 NGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYL 611 (801)
Q Consensus 532 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~ 611 (801)
+|+|.+++.... ...+++..++.++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||++.........
T Consensus 86 ~~~L~~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~- 160 (263)
T cd05052 86 YGNLLDYLRECN-RQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT- 160 (263)
T ss_pred CCcHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccCcceEEEcCCCcEEeCCCccccccccceee-
Confidence 999999886543 245899999999999999999999987 999999999999999999999999999876543211
Q ss_pred CCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChhH--HHHHhhcCccccccCCCCCCCCH
Q 003703 612 PSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWPT 688 (801)
Q Consensus 612 ~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~~--~~~~~~~g~~~~~~d~~~~~~~~ 688 (801)
......+++.|+|||++.+..++.++|||||||++|||++ |..||..... ....+..+. ....+.
T Consensus 161 ----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~--------~~~~~~ 228 (263)
T cd05052 161 ----AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGY--------RMERPE 228 (263)
T ss_pred ----ccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCC--------CCCCCC
Confidence 1122345678999999999999999999999999999998 9999864322 222222221 112233
Q ss_pred HHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHHh
Q 003703 689 FVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 723 (801)
Q Consensus 689 ~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~l 723 (801)
..+..+.+++.+||+.+|.+||++. .+.+.|+.+
T Consensus 229 ~~~~~~~~li~~cl~~~p~~Rp~~~-~l~~~l~~~ 262 (263)
T cd05052 229 GCPPKVYELMRACWQWNPSDRPSFA-EIHQAFETM 262 (263)
T ss_pred CCCHHHHHHHHHHccCCcccCCCHH-HHHHHHHhh
Confidence 3456899999999999999999999 677777753
No 74
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=6.3e-37 Score=328.17 Aligned_cols=238 Identities=23% Similarity=0.347 Sum_probs=190.2
Q ss_pred eeecCceEEEEEEEC--CeEEEEEEeccCCcc---cHHHHHHHHHHHhcCCCCceeeEeccccC--CcceeeecCCCCch
Q 003703 463 VGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ---GQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYLPNGSL 535 (801)
Q Consensus 463 LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~---~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E~~~~gsL 535 (801)
||+|+||+||++... |..||+|.+...... ....+..|+.++..++||||+++++++.. ..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 799999999999875 789999998654332 22457789999999999999999988743 47899999999999
Q ss_pred hhhhhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCCCc
Q 003703 536 QDRLFRKS-NVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSF 614 (801)
Q Consensus 536 ~~~L~~~~-~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~~~ 614 (801)
.+.+.... ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++..+.....
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~----- 152 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRR---IIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS----- 152 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCccceecCCCCc-----
Confidence 98875432 2346899999999999999999999987 99999999999999999999999999987654321
Q ss_pred cccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHH--HHHhhcCccccccCCCCCCCCHHHHH
Q 003703 615 HRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEV--RRAVSCGKLSSILDPLAGDWPTFVAR 692 (801)
Q Consensus 615 ~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~--~~~~~~g~~~~~~d~~~~~~~~~~~~ 692 (801)
......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ...+... ++.. ...++...+.
T Consensus 153 -~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~ 226 (280)
T cd05608 153 -KTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQR----ILND-SVTYPDKFSP 226 (280)
T ss_pred -cccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHh----hccc-CCCCcccCCH
Confidence 123457999999999999999999999999999999999999999643211 1111111 1111 1123444667
Q ss_pred HHHHHHHHhhhhCCCCCCCchH
Q 003703 693 RLVDLGLQCCELYGRERPDITP 714 (801)
Q Consensus 693 ~l~~Li~~Cl~~dP~~RPt~~e 714 (801)
.+.+++.+||+.||.+||++.+
T Consensus 227 ~~~~li~~~l~~~P~~R~~~~~ 248 (280)
T cd05608 227 ASKSFCEALLAKDPEKRLGFRD 248 (280)
T ss_pred HHHHHHHHHhcCCHHHhcCCCC
Confidence 8999999999999999997653
No 75
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=2.5e-36 Score=324.56 Aligned_cols=254 Identities=28% Similarity=0.453 Sum_probs=204.9
Q ss_pred cCccccceeeecCceEEEEEEEC-------CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEecccc--CCcce
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML-------GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSL 525 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~-------g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~L 525 (801)
.+|...+.||+|+||.||++... +..+|+|.+..........+.+|+.++.+++||||++++++|. +..++
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 84 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence 46778889999999999999752 4569999987655555567899999999999999999999985 35789
Q ss_pred eeecCCCCchhhhhhhcC----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeee
Q 003703 526 VYEYLPNGSLQDRLFRKS----------NVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKI 595 (801)
Q Consensus 526 V~E~~~~gsL~~~L~~~~----------~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL 595 (801)
||||+++++|.+++.... ....+++..++.++.|++.||.|||+.+ ++||||||+|||++.++.+||
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~---i~H~dlkp~Nili~~~~~~kl 161 (288)
T cd05093 85 VFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVKI 161 (288)
T ss_pred EEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccCcceEEEccCCcEEe
Confidence 999999999999886432 1235899999999999999999999987 999999999999999999999
Q ss_pred ecccceeeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChh--HHHHHhhc
Q 003703 596 CDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAG--EVRRAVSC 672 (801)
Q Consensus 596 ~DFGla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~--~~~~~~~~ 672 (801)
+|||+++........ .......+++.|+|||++.+..++.++|||||||++|+|+| |.+||.... .....+..
T Consensus 162 ~dfg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~ 237 (288)
T cd05093 162 GDFGMSRDVYSTDYY----RVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQ 237 (288)
T ss_pred ccCCccccccCCcee----ecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Confidence 999999865432211 11234456789999999998899999999999999999999 999986433 23333434
Q ss_pred CccccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHHhh
Q 003703 673 GKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLH 724 (801)
Q Consensus 673 g~~~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~l~ 724 (801)
+.... .+...+..+.+|+.+||+.||.+||++. ++...|+.+.
T Consensus 238 ~~~~~--------~~~~~~~~l~~li~~~l~~~p~~Rpt~~-~v~~~l~~~~ 280 (288)
T cd05093 238 GRVLQ--------RPRTCPKEVYDLMLGCWQREPHMRLNIK-EIHSLLQNLA 280 (288)
T ss_pred CCcCC--------CCCCCCHHHHHHHHHHccCChhhCCCHH-HHHHHHHHHH
Confidence 43221 1222345789999999999999999999 7888888765
No 76
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=5.6e-37 Score=341.04 Aligned_cols=245 Identities=24% Similarity=0.322 Sum_probs=191.5
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccceee
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVY 527 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~---~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~ 527 (801)
++|...+.||+|+||.||+++.. |+.||||++..... .....+.+|+.+|..++||||++++++|.+ ..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 46888899999999999999885 88999999975422 223457889999999999999999999854 478999
Q ss_pred ecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCC
Q 003703 528 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 607 (801)
Q Consensus 528 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~ 607 (801)
||+++|+|.+++.... .+++..+..|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.+...
T Consensus 81 E~~~~g~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 154 (364)
T cd05599 81 EYLPGGDMMTLLMKKD---TFTEEETRFYIAETILAIDSIHKLG---YIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKS 154 (364)
T ss_pred CCCCCcHHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEeecccceecccc
Confidence 9999999999987643 5888999999999999999999988 999999999999999999999999999865322
Q ss_pred CCcCC--------------------------------CccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh
Q 003703 608 TLYLP--------------------------------SFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT 655 (801)
Q Consensus 608 ~~~~~--------------------------------~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt 655 (801)
..... ........+||+.|+|||++....++.++|||||||++|||++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~ 234 (364)
T cd05599 155 HRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLV 234 (364)
T ss_pred ccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhc
Confidence 10000 0001123569999999999999999999999999999999999
Q ss_pred CCCCCCChhHHH--HHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCC
Q 003703 656 GRLPVGLAGEVR--RAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPD 711 (801)
Q Consensus 656 G~~Pf~~~~~~~--~~~~~g~~~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt 711 (801)
|.+||....... ..+..... .+.-+. ....+..+.+|+.+|+. +|.+|++
T Consensus 235 G~~Pf~~~~~~~~~~~i~~~~~-~~~~~~----~~~~s~~~~~li~~ll~-~p~~R~~ 286 (364)
T cd05599 235 GYPPFCSDNPQETYRKIINWKE-TLQFPD----EVPLSPEAKDLIKRLCC-EAERRLG 286 (364)
T ss_pred CCCCCCCCCHHHHHHHHHcCCC-ccCCCC----CCCCCHHHHHHHHHHcc-CHhhcCC
Confidence 999997544321 11111110 000011 11235678889999996 9999998
No 77
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=1.5e-36 Score=326.52 Aligned_cols=250 Identities=24% Similarity=0.309 Sum_probs=191.6
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccceeeec
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEY 529 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~-~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E~ 529 (801)
.+|...+.||.|+||.||+|... +..||+|++..... .....+.+|+.++.+++||||+++++++.. ..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY 84 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence 45788889999999999999875 78999999865432 233467899999999999999999998854 46799999
Q ss_pred CCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCC
Q 003703 530 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTL 609 (801)
Q Consensus 530 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~ 609 (801)
++ |+|.+++.... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 85 ~~-~~l~~~l~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~ 158 (288)
T cd07871 85 LD-SDLKQYLDNCG--NLMSMHNVKIFMFQLLRGLSYCHKRK---ILHRDLKPQNLLINEKGELKLADFGLARAKSVPTK 158 (288)
T ss_pred CC-cCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEECcCcceeeccCCCc
Confidence 97 48988886543 35788999999999999999999987 99999999999999999999999999986543221
Q ss_pred cCCCccccCCCCCCCCCCCcccccc-CCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHH---Hhh-cC-----------
Q 003703 610 YLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRR---AVS-CG----------- 673 (801)
Q Consensus 610 ~~~~~~~~~~~~Gt~~Y~APE~~~~-~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~---~~~-~g----------- 673 (801)
......||+.|+|||++.+ ..++.++|||||||++|+|+||++||........ ... .+
T Consensus 159 ------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (288)
T cd07871 159 ------TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGIT 232 (288)
T ss_pred ------cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccc
Confidence 1234568999999998865 5689999999999999999999999964322110 000 00
Q ss_pred ---ccccccCCCCC-----CCCHHHHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 674 ---KLSSILDPLAG-----DWPTFVARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 674 ---~~~~~~d~~~~-----~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
.+...+.+... ......+..+.+|+.+|++.||.+|||+.+.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l 283 (288)
T cd07871 233 SNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAAL 283 (288)
T ss_pred cchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHh
Confidence 00011111000 00112345788999999999999999998543
No 78
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=1.5e-36 Score=334.34 Aligned_cols=253 Identities=30% Similarity=0.483 Sum_probs=199.9
Q ss_pred cCccccceeeecCceEEEEEEEC-------CeEEEEEEeccCCcc-cHHHHHHHHHHHhcC-CCCceeeEeccccC---C
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML-------GRTVAIKMLYSHNMQ-GQLEFQQEVRVLSKL-QHPHLVTLLGACPE---A 522 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~-------g~~vAiK~l~~~~~~-~~~~f~~E~~il~~l-~HpnIV~l~g~~~~---~ 522 (801)
++|...+.||.|+||.||+|... ++.||+|++...... ....+..|+.++.++ +||||++++++|.. .
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~ 86 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGP 86 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCC
Confidence 36777889999999999999653 468999998754322 234577899999999 89999999998842 3
Q ss_pred cceeeecCCCCchhhhhhhcCC----------------------------------------------------------
Q 003703 523 WSLVYEYLPNGSLQDRLFRKSN---------------------------------------------------------- 544 (801)
Q Consensus 523 ~~LV~E~~~~gsL~~~L~~~~~---------------------------------------------------------- 544 (801)
.+++|||+++|+|.+++.....
T Consensus 87 ~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (337)
T cd05054 87 LMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELY 166 (337)
T ss_pred EEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHh
Confidence 6789999999999998864321
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCCCccccCCCCCCC
Q 003703 545 VSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSF 624 (801)
Q Consensus 545 ~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~Gt~ 624 (801)
..+++|..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.+...... .......++.
T Consensus 167 ~~~l~~~~~~~~~~qi~~aL~~lH~~~---ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~----~~~~~~~~~~ 239 (337)
T cd05054 167 KEPLTLEDLISYSFQVARGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY----VRKGDARLPL 239 (337)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEeCCCcEEEeccccchhcccCcch----hhccCCCCCc
Confidence 136899999999999999999999987 999999999999999999999999999876433211 1223455678
Q ss_pred CCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChh---HHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHH
Q 003703 625 PYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAG---EVRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQ 700 (801)
Q Consensus 625 ~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~---~~~~~~~~g~~~~~~d~~~~~~~~~~~~~l~~Li~~ 700 (801)
.|+|||++.+..++.++|||||||+||||++ |..||.... .....+..+... ..+...+..+.+++.+
T Consensus 240 ~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~l~~~ 311 (337)
T cd05054 240 KWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRM--------RAPEYATPEIYSIMLD 311 (337)
T ss_pred cccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCC--------CCCccCCHHHHHHHHH
Confidence 8999999999999999999999999999998 999996322 222223222211 1122345678999999
Q ss_pred hhhhCCCCCCCchHHHHHHHHHh
Q 003703 701 CCELYGRERPDITPSLVKELEQL 723 (801)
Q Consensus 701 Cl~~dP~~RPt~~e~l~~~L~~l 723 (801)
||+.+|.+||++. ++++.|+.+
T Consensus 312 cl~~~p~~RPs~~-ell~~l~~~ 333 (337)
T cd05054 312 CWHNNPEDRPTFS-ELVEILGDL 333 (337)
T ss_pred HccCChhhCcCHH-HHHHHHHHH
Confidence 9999999999998 777777765
No 79
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=4.7e-37 Score=324.43 Aligned_cols=250 Identities=30% Similarity=0.525 Sum_probs=205.6
Q ss_pred hcCccccceeeecCceEEEEEEEC-CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccccC--CcceeeecC
Q 003703 454 TCNFSESFKVGQGGFGCVYKGEML-GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYL 530 (801)
Q Consensus 454 t~~f~~~~~LG~G~fG~Vy~g~~~-g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E~~ 530 (801)
..+|...++||.|+||.||+|... +..+|+|.+..........+..|+.++..++||||+++++++.+ ..++||||+
T Consensus 5 ~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 84 (261)
T cd05148 5 REEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELM 84 (261)
T ss_pred HHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeec
Confidence 456778889999999999999886 68899999987666556678999999999999999999998843 478999999
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCc
Q 003703 531 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLY 610 (801)
Q Consensus 531 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~ 610 (801)
++|+|.+++.... ...+++..+..++.+|+.||.|||+.+ |+|+||||+||+++.++.+||+|||++........
T Consensus 85 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~al~~lH~~~---i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~- 159 (261)
T cd05148 85 EKGSLLAFLRSPE-GQVLPVASLIDMACQVAEGMAYLEEQN---SIHRDLAARNILVGEDLVCKVADFGLARLIKEDVY- 159 (261)
T ss_pred ccCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccCcceEEEcCCceEEEccccchhhcCCccc-
Confidence 9999999997643 246899999999999999999999987 99999999999999999999999999987643321
Q ss_pred CCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChh--HHHHHhhcCccccccCCCCCCCC
Q 003703 611 LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAG--EVRRAVSCGKLSSILDPLAGDWP 687 (801)
Q Consensus 611 ~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~--~~~~~~~~g~~~~~~d~~~~~~~ 687 (801)
......++..|++||++....++.++||||||+++|+|++ |+.||.... .....+..+. ....+
T Consensus 160 -----~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~--------~~~~~ 226 (261)
T cd05148 160 -----LSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGY--------RMPCP 226 (261)
T ss_pred -----cccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCC--------cCCCC
Confidence 1224456788999999988899999999999999999998 899996433 2222222221 11122
Q ss_pred HHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHH
Q 003703 688 TFVARRLVDLGLQCCELYGRERPDITPSLVKELEQ 722 (801)
Q Consensus 688 ~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~ 722 (801)
...+..+.+++.+||+.+|.+||++. ++.+.|+.
T Consensus 227 ~~~~~~~~~~i~~~l~~~p~~Rpt~~-~l~~~L~~ 260 (261)
T cd05148 227 AKCPQEIYKIMLECWAAEPEDRPSFK-ALREELDN 260 (261)
T ss_pred CCCCHHHHHHHHHHcCCCchhCcCHH-HHHHHHhc
Confidence 34556889999999999999999999 78787764
No 80
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=2.4e-37 Score=338.83 Aligned_cols=228 Identities=26% Similarity=0.331 Sum_probs=186.3
Q ss_pred eeeecCceEEEEEEEC--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEeccccC--CcceeeecCCCCc
Q 003703 462 KVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYLPNGS 534 (801)
Q Consensus 462 ~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~---~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E~~~~gs 534 (801)
.||+|+||.||++... |..||+|++..... .....+..|+.++..++||||+++++++.. ..++||||+++|+
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~ 81 (325)
T cd05594 2 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGE 81 (325)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCCc
Confidence 5999999999999874 88999999975432 223457789999999999999999988843 5789999999999
Q ss_pred hhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCCC
Q 003703 535 LQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHS-SKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPS 613 (801)
Q Consensus 535 L~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~-~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~~ 613 (801)
|..++.... .+++..+..|+.||+.||.|||+ .+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 82 L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH~~~~---ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~---- 151 (325)
T cd05594 82 LFFHLSRER---VFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA---- 151 (325)
T ss_pred HHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhcCC---EEecCCCCCeEEECCCCCEEEecCCCCeecCCCCc----
Confidence 998886543 58899999999999999999997 55 99999999999999999999999999876432221
Q ss_pred ccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhH--HHHHhhcCccccccCCCCCCCCHHHH
Q 003703 614 FHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWPTFVA 691 (801)
Q Consensus 614 ~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~--~~~~~~~g~~~~~~d~~~~~~~~~~~ 691 (801)
......||+.|+|||++.+..++.++|||||||+||+|+||+.||..... ....+..+. ..+|...+
T Consensus 152 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~---------~~~p~~~~ 220 (325)
T cd05594 152 --TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE---------IRFPRTLS 220 (325)
T ss_pred --ccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCC---------CCCCCCCC
Confidence 12345699999999999999999999999999999999999999964332 222221111 12334456
Q ss_pred HHHHHHHHHhhhhCCCCCC
Q 003703 692 RRLVDLGLQCCELYGRERP 710 (801)
Q Consensus 692 ~~l~~Li~~Cl~~dP~~RP 710 (801)
..+.+|+.+||+.||.+||
T Consensus 221 ~~~~~li~~~L~~dP~~R~ 239 (325)
T cd05594 221 PEAKSLLSGLLKKDPKQRL 239 (325)
T ss_pred HHHHHHHHHHhhcCHHHhC
Confidence 6889999999999999997
No 81
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=6.4e-37 Score=338.31 Aligned_cols=250 Identities=25% Similarity=0.329 Sum_probs=197.4
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccceee
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVY 527 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~---~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~ 527 (801)
++|...+.||+|+||.||+|+.. |..||||++..... .....+.+|+.++..++||||+++++++.+ ..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 36888899999999999999986 89999999975432 234468899999999999999999998854 478999
Q ss_pred ecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCC
Q 003703 528 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 607 (801)
Q Consensus 528 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~ 607 (801)
||+++|+|.+++... ..+++..+..|+.||+.||.|||+.+ |+||||||+||||+.++.+||+|||++......
T Consensus 81 e~~~~~~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~g---iiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~ 154 (350)
T cd05573 81 EYMPGGDLMNLLIRK---DVFPEETARFYIAELVLALDSVHKLG---FIHRDIKPDNILIDADGHIKLADFGLCKKMNKA 154 (350)
T ss_pred cCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEeecCCCCccCccc
Confidence 999999999999765 36888999999999999999999987 999999999999999999999999999876543
Q ss_pred CCc-----------------------CCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChh
Q 003703 608 TLY-----------------------LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAG 664 (801)
Q Consensus 608 ~~~-----------------------~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~ 664 (801)
... ...........||+.|+|||++.+..++.++|||||||+||||++|+.||....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~ 234 (350)
T cd05573 155 KDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDT 234 (350)
T ss_pred CcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCC
Confidence 200 000012234579999999999999999999999999999999999999997544
Q ss_pred HHH--HHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCC-chHHH
Q 003703 665 EVR--RAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPD-ITPSL 716 (801)
Q Consensus 665 ~~~--~~~~~g~~~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt-~~e~l 716 (801)
... ..+.... ....-+... ..+..+.+|+.+|+. +|.+||+ +.+.+
T Consensus 235 ~~~~~~~i~~~~-~~~~~p~~~----~~~~~~~~li~~ll~-dp~~R~~s~~~ll 283 (350)
T cd05573 235 LQETYNKIINWK-ESLRFPPDP----PVSPEAIDLICRLLC-DPEDRLGSFEEIK 283 (350)
T ss_pred HHHHHHHHhccC-CcccCCCCC----CCCHHHHHHHHHHcc-ChhhcCCCHHHHh
Confidence 321 1111100 000011111 145688899999997 9999999 77443
No 82
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=4e-36 Score=318.67 Aligned_cols=251 Identities=28% Similarity=0.447 Sum_probs=201.3
Q ss_pred cCccccceeeecCceEEEEEEEC-----CeEEEEEEeccCCcc-cHHHHHHHHHHHhcCCCCceeeEeccccC--Cccee
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML-----GRTVAIKMLYSHNMQ-GQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLV 526 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~-----g~~vAiK~l~~~~~~-~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV 526 (801)
++|.....||+|+||.||+|.+. ...||||.+...... ....|.+|+.++.+++||||+++++++.+ ..++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv 83 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII 83 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence 46888889999999999999874 347999998755432 34568899999999999999999998843 47899
Q ss_pred eecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccC
Q 003703 527 YEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTE 606 (801)
Q Consensus 527 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~ 606 (801)
|||+++|+|.+++.... ..+++..++.++.+++.||.|||+.+ |+|+||||+|||++.++.++|+|||+++....
T Consensus 84 ~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~Lh~~~---i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 158 (266)
T cd05033 84 TEYMENGSLDKFLREND--GKFTVGQLVGMLRGIASGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRRLED 158 (266)
T ss_pred EEcCCCCCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCCEEECccchhhcccc
Confidence 99999999999987643 36899999999999999999999987 99999999999999999999999999988752
Q ss_pred CCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChhH--HHHHhhcCccccccCCCC
Q 003703 607 DTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKLSSILDPLA 683 (801)
Q Consensus 607 ~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~~--~~~~~~~g~~~~~~d~~~ 683 (801)
.... .......+++.|+|||++.+..++.++||||||+++|+|++ |..||..... ....+..+... +
T Consensus 159 ~~~~----~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~----~-- 228 (266)
T cd05033 159 SEAT----YTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYRL----P-- 228 (266)
T ss_pred cccc----eeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCC----C--
Confidence 2211 11223345778999999998999999999999999999998 9999853332 22333222111 1
Q ss_pred CCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHHh
Q 003703 684 GDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 723 (801)
Q Consensus 684 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~l 723 (801)
.+...+..+.+|+.+||+.+|.+||++. ++.+.|+.+
T Consensus 229 --~~~~~~~~l~~li~~cl~~~p~~Rp~~~-ei~~~l~~~ 265 (266)
T cd05033 229 --PPMDCPSALYQLMLDCWQKDRNERPTFS-QIVSTLDKM 265 (266)
T ss_pred --CCCCCCHHHHHHHHHHcCCCcccCcCHH-HHHHHHHhh
Confidence 1223456789999999999999999999 677777653
No 83
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=3.2e-36 Score=322.59 Aligned_cols=260 Identities=27% Similarity=0.401 Sum_probs=199.4
Q ss_pred cCccccceeeecCceEEEEEEE------CCeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEecccc----CCcc
Q 003703 455 CNFSESFKVGQGGFGCVYKGEM------LGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP----EAWS 524 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~------~g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~----~~~~ 524 (801)
.+|.....||+|+||.||++.. .+..||+|.+..........|.+|+.++.+++||||+++++++. ...+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 83 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR 83 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence 4677788999999999999975 27789999987765555667899999999999999999999763 2467
Q ss_pred eeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeec
Q 003703 525 LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLV 604 (801)
Q Consensus 525 LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~ 604 (801)
+||||+++|+|.+++.... ..++|..++.++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 84 lv~e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~~l~~aL~~LH~~~---i~H~dlkp~nili~~~~~~~l~dfg~~~~~ 158 (284)
T cd05081 84 LVMEYLPYGSLRDYLQKHR--ERLDHRKLLLYASQICKGMEYLGSKR---YVHRDLATRNILVESENRVKIGDFGLTKVL 158 (284)
T ss_pred EEEEecCCCCHHHHHHhcC--cCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHhhEEECCCCeEEECCCcccccc
Confidence 9999999999999986543 35899999999999999999999987 999999999999999999999999999876
Q ss_pred cCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHH-HHHhhcCcc--------
Q 003703 605 TEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEV-RRAVSCGKL-------- 675 (801)
Q Consensus 605 ~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~-~~~~~~g~~-------- 675 (801)
....... .......++..|+|||++.+..++.++|||||||++|||++|..|+...... ...+.....
T Consensus 159 ~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd05081 159 PQDKEYY---KVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHL 235 (284)
T ss_pred cCCCcce---eecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHH
Confidence 5432110 0111223455699999999889999999999999999999998776432211 111111000
Q ss_pred ccccCC-CCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHHh
Q 003703 676 SSILDP-LAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 723 (801)
Q Consensus 676 ~~~~d~-~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~l 723 (801)
.+.+.. .....+...+..+.+|+.+||..+|.+|||+. +++..|+.+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~-ei~~~l~~~ 283 (284)
T cd05081 236 IELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFS-ELALQVEAI 283 (284)
T ss_pred HHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHH-HHHHHHHhc
Confidence 000100 00111223456799999999999999999999 677777754
No 84
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=1.6e-36 Score=331.81 Aligned_cols=231 Identities=27% Similarity=0.374 Sum_probs=188.7
Q ss_pred eeeecCceEEEEEEEC--CeEEEEEEeccCC---cccHHHHHHHHHHHhcC-CCCceeeEeccccC--CcceeeecCCCC
Q 003703 462 KVGQGGFGCVYKGEML--GRTVAIKMLYSHN---MQGQLEFQQEVRVLSKL-QHPHLVTLLGACPE--AWSLVYEYLPNG 533 (801)
Q Consensus 462 ~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~---~~~~~~f~~E~~il~~l-~HpnIV~l~g~~~~--~~~LV~E~~~~g 533 (801)
.||+|+||.||+|... ++.||||++.... ......+..|..++..+ +||||+++++++.+ ..++||||+++|
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~g 81 (320)
T cd05590 2 VLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGG 81 (320)
T ss_pred eeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCCc
Confidence 6999999999999885 7899999987542 22334577888888876 69999999998844 478999999999
Q ss_pred chhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCCC
Q 003703 534 SLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPS 613 (801)
Q Consensus 534 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~~ 613 (801)
+|.+++.... .+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 82 ~L~~~i~~~~---~l~~~~~~~~~~ql~~~L~~lH~~~---ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~----- 150 (320)
T cd05590 82 DLMFHIQKSR---RFDEARARFYAAEITSALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNG----- 150 (320)
T ss_pred hHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCC-----
Confidence 9999886543 5888999999999999999999987 9999999999999999999999999987643221
Q ss_pred ccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhH--HHHHhhcCccccccCCCCCCCCHHHH
Q 003703 614 FHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWPTFVA 691 (801)
Q Consensus 614 ~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~--~~~~~~~g~~~~~~d~~~~~~~~~~~ 691 (801)
.......||+.|+|||++.+..++.++|||||||++|+|++|+.||..... +...+..+.. .++...+
T Consensus 151 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~---------~~~~~~~ 220 (320)
T cd05590 151 -KTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEV---------VYPTWLS 220 (320)
T ss_pred -CcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCC---------CCCCCCC
Confidence 122345799999999999999999999999999999999999999975432 2222322221 2233355
Q ss_pred HHHHHHHHHhhhhCCCCCCCch
Q 003703 692 RRLVDLGLQCCELYGRERPDIT 713 (801)
Q Consensus 692 ~~l~~Li~~Cl~~dP~~RPt~~ 713 (801)
..+.+|+.+||+.||.+||+..
T Consensus 221 ~~~~~li~~~L~~dP~~R~~~~ 242 (320)
T cd05590 221 QDAVDILKAFMTKNPTMRLGSL 242 (320)
T ss_pred HHHHHHHHHHcccCHHHCCCCC
Confidence 6889999999999999999984
No 85
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=2.8e-36 Score=321.91 Aligned_cols=251 Identities=29% Similarity=0.469 Sum_probs=200.6
Q ss_pred cCccccceeeecCceEEEEEEEC-------CeEEEEEEeccCCcc-cHHHHHHHHHHHhcCCCCceeeEeccccC--Ccc
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML-------GRTVAIKMLYSHNMQ-GQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWS 524 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~-------g~~vAiK~l~~~~~~-~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~ 524 (801)
.+|...+.||+|+||.||+|... +..||||.+...... ....|.+|+.+|..++||||+++++++.. ..+
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 84 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI 84 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence 35667778999999999999763 368999998765444 34679999999999999999999999843 578
Q ss_pred eeeecCCCCchhhhhhhcC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCe
Q 003703 525 LVYEYLPNGSLQDRLFRKS-----------NVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSS 593 (801)
Q Consensus 525 LV~E~~~~gsL~~~L~~~~-----------~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~v 593 (801)
+||||+++|+|.+++.... ....+++..+..++.+++.||.|||+.+ ++||||||+|||++.++.+
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~h~dlkp~nili~~~~~~ 161 (280)
T cd05049 85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQH---FVHRDLATRNCLVGYDLVV 161 (280)
T ss_pred EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eeccccccceEEEcCCCeE
Confidence 9999999999999987543 1245789999999999999999999987 9999999999999999999
Q ss_pred eeecccceeeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChh--HHHHHh
Q 003703 594 KICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAG--EVRRAV 670 (801)
Q Consensus 594 KL~DFGla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~--~~~~~~ 670 (801)
||+|||+++........ .......+++.|+|||++.+..+++++|||||||++|||++ |..||.... .....+
T Consensus 162 kl~d~g~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~ 237 (280)
T cd05049 162 KIGDFGMSRDVYTTDYY----RVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECI 237 (280)
T ss_pred EECCcccceecccCcce----ecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Confidence 99999999865332211 11234456789999999999999999999999999999999 999985332 222333
Q ss_pred hcCccccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHH
Q 003703 671 SCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELE 721 (801)
Q Consensus 671 ~~g~~~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~ 721 (801)
..+.... .+...+..+.+++.+||+.||.+||++. +++..|+
T Consensus 238 ~~~~~~~--------~~~~~~~~~~~li~~~l~~~p~~Rp~~~-eil~~l~ 279 (280)
T cd05049 238 TQGRLLQ--------RPRTCPSEVYDIMLGCWKRDPQQRINIK-DIHERLQ 279 (280)
T ss_pred HcCCcCC--------CCCCCCHHHHHHHHHHcCCCcccCCCHH-HHHHHhh
Confidence 3332211 1223456789999999999999999998 5666554
No 86
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=5.8e-37 Score=339.79 Aligned_cols=240 Identities=25% Similarity=0.405 Sum_probs=185.9
Q ss_pred ccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEeccccC--CcceeeecCC
Q 003703 457 FSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYLP 531 (801)
Q Consensus 457 f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~-~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E~~~ 531 (801)
|...++||+|+||.||+|++. |+.||||++..... .....|.+|+.++..++|+||+++++++.+ ..++||||++
T Consensus 76 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 155 (353)
T PLN00034 76 LERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMD 155 (353)
T ss_pred HhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecCC
Confidence 344567999999999999885 88999999865433 234568899999999999999999999854 5789999999
Q ss_pred CCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcC
Q 003703 532 NGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYL 611 (801)
Q Consensus 532 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~ 611 (801)
+|+|.+.. .+.+..+..|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.+.....
T Consensus 156 ~~~L~~~~-------~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~-- 223 (353)
T PLN00034 156 GGSLEGTH-------IADEQFLADVARQILSGIAYLHRRH---IVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMD-- 223 (353)
T ss_pred CCcccccc-------cCCHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCEEEcccccceecccccc--
Confidence 99986532 3456778899999999999999988 99999999999999999999999999987643221
Q ss_pred CCccccCCCCCCCCCCCcccccc-----CCCCcchhHHhHHHHHHHHHhCCCCCCChhH--HHHHhhcCccccccCCCCC
Q 003703 612 PSFHRSTAPKGSFPYADPEYHRT-----GVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILDPLAG 684 (801)
Q Consensus 612 ~~~~~~~~~~Gt~~Y~APE~~~~-----~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~--~~~~~~~g~~~~~~d~~~~ 684 (801)
......||+.|+|||++.. ...+.++|||||||++|||++|+.||..... .......... ....
T Consensus 224 ----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~-----~~~~ 294 (353)
T PLN00034 224 ----PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICM-----SQPP 294 (353)
T ss_pred ----cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhc-----cCCC
Confidence 1234579999999998743 2345689999999999999999999963211 1111100000 0011
Q ss_pred CCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHH
Q 003703 685 DWPTFVARRLVDLGLQCCELYGRERPDITPSLV 717 (801)
Q Consensus 685 ~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~ 717 (801)
..+...+..+.+|+.+||+.||.+||++.+.+.
T Consensus 295 ~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~ 327 (353)
T PLN00034 295 EAPATASREFRHFISCCLQREPAKRWSAMQLLQ 327 (353)
T ss_pred CCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 223345678999999999999999999985443
No 87
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=5.9e-36 Score=319.86 Aligned_cols=252 Identities=27% Similarity=0.429 Sum_probs=201.2
Q ss_pred cCccccceeeecCceEEEEEEEC--Ce----EEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEeccccC-Cccee
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GR----TVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACPE-AWSLV 526 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~----~vAiK~l~~~~~-~~~~~f~~E~~il~~l~HpnIV~l~g~~~~-~~~LV 526 (801)
.+|...++||+|+||.||+|++. |. .||+|++..... .....+.+|+.++..++||||++++++|.. ..+++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~l~ 86 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTSTVQLV 86 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCCCcEEE
Confidence 46777889999999999999863 43 589999875443 334568899999999999999999999854 56799
Q ss_pred eecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccC
Q 003703 527 YEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTE 606 (801)
Q Consensus 527 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~ 606 (801)
|+|+++|+|.+++.... ..+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 87 ~~~~~~g~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~---iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~ 161 (279)
T cd05109 87 TQLMPYGCLLDYVRENK--DRIGSQDLLNWCVQIAKGMSYLEEVR---LVHRDLAARNVLVKSPNHVKITDFGLARLLDI 161 (279)
T ss_pred EEcCCCCCHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccccceEEEcCCCcEEECCCCceeeccc
Confidence 99999999999986543 46899999999999999999999987 99999999999999999999999999987753
Q ss_pred CCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChh--HHHHHhhcCccccccCCCC
Q 003703 607 DTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAG--EVRRAVSCGKLSSILDPLA 683 (801)
Q Consensus 607 ~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~--~~~~~~~~g~~~~~~d~~~ 683 (801)
.... .......+++.|+|||++.+..++.++|||||||++|||++ |..||.... .....+..+....
T Consensus 162 ~~~~----~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~------ 231 (279)
T cd05109 162 DETE----YHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLP------ 231 (279)
T ss_pred ccce----eecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCC------
Confidence 3211 11223346778999999988899999999999999999998 999996432 2223333332111
Q ss_pred CCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHHhh
Q 003703 684 GDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLH 724 (801)
Q Consensus 684 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~l~ 724 (801)
.+...+..+.+++.+||+.||..||++. ++.+.|+.+.
T Consensus 232 --~~~~~~~~~~~li~~~l~~dp~~Rp~~~-~l~~~l~~~~ 269 (279)
T cd05109 232 --QPPICTIDVYMIMVKCWMIDSECRPRFR-ELVDEFSRMA 269 (279)
T ss_pred --CCccCCHHHHHHHHHHcCCChhhCcCHH-HHHHHHHHhh
Confidence 1223456789999999999999999999 5667777653
No 88
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=2.3e-36 Score=329.99 Aligned_cols=234 Identities=29% Similarity=0.381 Sum_probs=188.2
Q ss_pred eeeecCceEEEEEEEC--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcC-CCCceeeEeccccC--CcceeeecCCCC
Q 003703 462 KVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKL-QHPHLVTLLGACPE--AWSLVYEYLPNG 533 (801)
Q Consensus 462 ~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~---~~~~~f~~E~~il~~l-~HpnIV~l~g~~~~--~~~LV~E~~~~g 533 (801)
.||+|+||.||+|+.. +..||||+++.... .....+..|..++..+ +||||+++++++.+ ..++||||+++|
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~g 81 (316)
T cd05619 2 MLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNGG 81 (316)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCCC
Confidence 6999999999999885 67899999976421 2234466788888764 99999999998843 478999999999
Q ss_pred chhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCCC
Q 003703 534 SLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPS 613 (801)
Q Consensus 534 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~~ 613 (801)
+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 82 ~L~~~l~~~---~~~~~~~~~~~~~qi~~al~~LH~~~---ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~---- 151 (316)
T cd05619 82 DLMFHIQSC---HKFDLPRATFYAAEIICGLQFLHSKG---IVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDA---- 151 (316)
T ss_pred cHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCCCCEEEccCCcceECCCCCC----
Confidence 999988654 35788999999999999999999987 99999999999999999999999999875432211
Q ss_pred ccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhH--HHHHhhcCccccccCCCCCCCCHHHH
Q 003703 614 FHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWPTFVA 691 (801)
Q Consensus 614 ~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~--~~~~~~~g~~~~~~d~~~~~~~~~~~ 691 (801)
......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ....+..+. ..++...+
T Consensus 152 --~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~---------~~~~~~~~ 220 (316)
T cd05619 152 --KTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDN---------PCYPRWLT 220 (316)
T ss_pred --ceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC---------CCCCccCC
Confidence 12345799999999999999999999999999999999999999964432 222222211 11233355
Q ss_pred HHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 692 RRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 692 ~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
..+.+|+.+||+.||.+||++.+.+
T Consensus 221 ~~~~~li~~~l~~~P~~R~~~~~~l 245 (316)
T cd05619 221 REAKDILVKLFVREPERRLGVKGDI 245 (316)
T ss_pred HHHHHHHHHHhccCHhhcCCChHHH
Confidence 6788999999999999999997433
No 89
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=4e-36 Score=321.78 Aligned_cols=250 Identities=30% Similarity=0.446 Sum_probs=197.9
Q ss_pred CccccceeeecCceEEEEEEE------CCeEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEecccc--CCccee
Q 003703 456 NFSESFKVGQGGFGCVYKGEM------LGRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLV 526 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~------~g~~vAiK~l~~~~~-~~~~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~LV 526 (801)
+|.....||+|+||.||+|.+ .+..||+|.+..... .....|.+|+.++..++||||+++++++. ...++|
T Consensus 6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 85 (283)
T cd05090 6 AVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCML 85 (283)
T ss_pred hceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEEE
Confidence 466677899999999999985 257899999875433 33356889999999999999999999874 357899
Q ss_pred eecCCCCchhhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCC
Q 003703 527 YEYLPNGSLQDRLFRKSN--------------VSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELS 592 (801)
Q Consensus 527 ~E~~~~gsL~~~L~~~~~--------------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~ 592 (801)
|||+++|+|.+++..... ...+++...+.++.+++.||.|||+.+ |+||||||+|||++.++.
T Consensus 86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~nili~~~~~ 162 (283)
T cd05090 86 FEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHF---FVHKDLAARNILIGEQLH 162 (283)
T ss_pred EEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcC---eehhccccceEEEcCCCc
Confidence 999999999998864321 234788999999999999999999987 999999999999999999
Q ss_pred eeeecccceeeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChh--HHHHH
Q 003703 593 SKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAG--EVRRA 669 (801)
Q Consensus 593 vKL~DFGla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~--~~~~~ 669 (801)
+||+|||+++........ .......++..|+|||++.+..++.++|||||||++|||++ |..||.... .+...
T Consensus 163 ~kl~dfg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~ 238 (283)
T cd05090 163 VKISDLGLSREIYSADYY----RVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEM 238 (283)
T ss_pred EEeccccccccccCCcce----ecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 999999999876433211 11234456788999999988889999999999999999999 999986432 22333
Q ss_pred hhcCccccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHH
Q 003703 670 VSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELE 721 (801)
Q Consensus 670 ~~~g~~~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~ 721 (801)
+..+... ..+...+..+.+++.+||+.+|.+||++. .+.+.|.
T Consensus 239 ~~~~~~~--------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~-~i~~~l~ 281 (283)
T cd05090 239 VRKRQLL--------PCSEDCPPRMYSLMTECWQEGPSRRPRFK-DIHTRLR 281 (283)
T ss_pred HHcCCcC--------CCCCCCCHHHHHHHHHHcccCcccCcCHH-HHHHHhh
Confidence 3332211 12223456789999999999999999998 5666554
No 90
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=1.5e-36 Score=333.39 Aligned_cols=230 Identities=24% Similarity=0.324 Sum_probs=186.7
Q ss_pred eeeecCceEEEEEEEC--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcC-CCCceeeEecccc--CCcceeeecCCCC
Q 003703 462 KVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKL-QHPHLVTLLGACP--EAWSLVYEYLPNG 533 (801)
Q Consensus 462 ~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~---~~~~~f~~E~~il~~l-~HpnIV~l~g~~~--~~~~LV~E~~~~g 533 (801)
.||+|+||.||+++.. +..||+|++..... .....+..|+.++.++ +||||+++++++. ...++||||+++|
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~~ 81 (329)
T cd05618 2 VIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGG 81 (329)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCCC
Confidence 6999999999999885 78999999976432 2334577899888877 8999999999884 3578999999999
Q ss_pred chhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCCC
Q 003703 534 SLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPS 613 (801)
Q Consensus 534 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~~ 613 (801)
+|..++... ..+++..+..|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 82 ~L~~~~~~~---~~l~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~----- 150 (329)
T cd05618 82 DLMFHMQRQ---RKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG----- 150 (329)
T ss_pred CHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCCCCEEEeeCCccccccCCC-----
Confidence 999888654 35889999999999999999999988 9999999999999999999999999987542211
Q ss_pred ccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChh-----------HHHHHhhcCccccccCCC
Q 003703 614 FHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAG-----------EVRRAVSCGKLSSILDPL 682 (801)
Q Consensus 614 ~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~-----------~~~~~~~~g~~~~~~d~~ 682 (801)
.......||+.|+|||++.+..++.++|||||||++|||+||+.||.... .+...+..+
T Consensus 151 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~--------- 220 (329)
T cd05618 151 -DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK--------- 220 (329)
T ss_pred -CccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcC---------
Confidence 11234579999999999999999999999999999999999999995211 111111111
Q ss_pred CCCCCHHHHHHHHHHHHHhhhhCCCCCCCc
Q 003703 683 AGDWPTFVARRLVDLGLQCCELYGRERPDI 712 (801)
Q Consensus 683 ~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~ 712 (801)
....|...+..+.+|+.+||+.||.+||+.
T Consensus 221 ~~~~p~~~~~~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 221 QIRIPRSLSVKAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred CCCCCCCCCHHHHHHHHHHhcCCHHHcCCC
Confidence 112344456788999999999999999985
No 91
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=5.4e-36 Score=318.29 Aligned_cols=249 Identities=24% Similarity=0.402 Sum_probs=195.6
Q ss_pred cccceeeecCceEEEEEEEC--C--eEEEEEEeccCC--cccHHHHHHHHHHHhcCCCCceeeEeccccC--------Cc
Q 003703 458 SESFKVGQGGFGCVYKGEML--G--RTVAIKMLYSHN--MQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--------AW 523 (801)
Q Consensus 458 ~~~~~LG~G~fG~Vy~g~~~--g--~~vAiK~l~~~~--~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--------~~ 523 (801)
.....||+|+||.||+|.+. + ..||+|.++... ......|..|+.++..++||||++++++|.. ..
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 81 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP 81 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence 45678999999999999885 3 369999886543 2334568899999999999999999997621 25
Q ss_pred ceeeecCCCCchhhhhhhcC---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccc
Q 003703 524 SLVYEYLPNGSLQDRLFRKS---NVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGI 600 (801)
Q Consensus 524 ~LV~E~~~~gsL~~~L~~~~---~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGl 600 (801)
+++|||+++|+|.+++.... ....+++.....++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~ 158 (272)
T cd05075 82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKS---FIHRDLAARNCMLNENMNVCVADFGL 158 (272)
T ss_pred EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhheEEcCCCCEEECCCCc
Confidence 78999999999998874321 2345899999999999999999999977 99999999999999999999999999
Q ss_pred eeeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChhH--HHHHhhcCcccc
Q 003703 601 CRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKLSS 677 (801)
Q Consensus 601 a~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~~--~~~~~~~g~~~~ 677 (801)
++.+...... .......+++.|++||++....++.++|||||||++|||++ |+.||..... ....+..+....
T Consensus 159 ~~~~~~~~~~----~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~ 234 (272)
T cd05075 159 SKKIYNGDYY----RQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNRLK 234 (272)
T ss_pred ccccCcccce----ecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCC
Confidence 9876543211 11223346778999999999999999999999999999999 8899964332 333333332211
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHH
Q 003703 678 ILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQ 722 (801)
Q Consensus 678 ~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~ 722 (801)
.+...+..+.+++.+||+.+|.+||++. ++...|+.
T Consensus 235 --------~~~~~~~~~~~li~~~l~~~p~~Rps~~-~l~~~l~~ 270 (272)
T cd05075 235 --------QPPDCLDGLYSLMSSCWLLNPKDRPSFE-TLRCELEK 270 (272)
T ss_pred --------CCCCCCHHHHHHHHHHcCCCcccCcCHH-HHHHHHHh
Confidence 1223445789999999999999999998 67777765
No 92
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=4.7e-36 Score=320.86 Aligned_cols=242 Identities=23% Similarity=0.320 Sum_probs=189.7
Q ss_pred eeecCceEEEEEEEC--CeEEEEEEeccCCcc---cHHHHHHHHHHHhcCCCCceeeEeccccC--CcceeeecCCCCch
Q 003703 463 VGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ---GQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYLPNGSL 535 (801)
Q Consensus 463 LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~---~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E~~~~gsL 535 (801)
||+|+||.||+++.. |..||+|.+...... ....+..|+.++.+++||||+++++++.+ ..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 799999999999875 899999998653322 23345679999999999999999988843 47899999999999
Q ss_pred hhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCCCcc
Q 003703 536 QDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFH 615 (801)
Q Consensus 536 ~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~~~~ 615 (801)
.+++..... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.++|+|||++.......
T Consensus 81 ~~~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~------- 149 (277)
T cd05607 81 KYHIYNVGE-RGLEMERVIHYSAQITCGILHLHSMD---IVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK------- 149 (277)
T ss_pred HHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHHHCC---EEEccCChHhEEEcCCCCEEEeeceeeeecCCCc-------
Confidence 988865432 45889999999999999999999987 9999999999999999999999999998765322
Q ss_pred ccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhH--HHHHhhcCccccccCCCCCCCCHHHHHH
Q 003703 616 RSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWPTFVARR 693 (801)
Q Consensus 616 ~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~--~~~~~~~g~~~~~~d~~~~~~~~~~~~~ 693 (801)
......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ....+....+...+.. .....+..
T Consensus 150 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 225 (277)
T cd05607 150 TITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKF----EHQNFTEE 225 (277)
T ss_pred eeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhcccccc----ccccCCHH
Confidence 12345699999999999988899999999999999999999999964221 1111111111111110 01134567
Q ss_pred HHHHHHHhhhhCCCCCCCchHHHHHH
Q 003703 694 LVDLGLQCCELYGRERPDITPSLVKE 719 (801)
Q Consensus 694 l~~Li~~Cl~~dP~~RPt~~e~l~~~ 719 (801)
+.+|+.+||+.||.+||++.+.+.+.
T Consensus 226 ~~~li~~~L~~~P~~R~~~~~~~~~~ 251 (277)
T cd05607 226 SKDICRLFLAKKPEDRLGSREKNDDP 251 (277)
T ss_pred HHHHHHHHhccCHhhCCCCccchhhh
Confidence 89999999999999999998544333
No 93
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=2e-36 Score=331.37 Aligned_cols=238 Identities=26% Similarity=0.354 Sum_probs=192.2
Q ss_pred CccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCC-CCceeeEecccc--CCcceee
Q 003703 456 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQ-HPHLVTLLGACP--EAWSLVY 527 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~---~~~~~f~~E~~il~~l~-HpnIV~l~g~~~--~~~~LV~ 527 (801)
+|...+.||+|+||.||++... |..||||++..... .....+..|..++..+. |++|+++++++. +..++||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 4677789999999999999875 78999999875422 22345778899998885 567778888774 3578999
Q ss_pred ecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCC
Q 003703 528 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 607 (801)
Q Consensus 528 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~ 607 (801)
||+++|+|.+++.... .+++..+..|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 81 Ey~~~g~L~~~i~~~~---~l~~~~~~~i~~qi~~al~~lH~~~---ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~ 154 (323)
T cd05615 81 EYVNGGDLMYHIQQVG---KFKEPQAVFYAAEISVGLFFLHRRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVD 154 (323)
T ss_pred cCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEeccccccccCCC
Confidence 9999999999886543 5889999999999999999999987 999999999999999999999999998754322
Q ss_pred CCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhH--HHHHhhcCccccccCCCCCC
Q 003703 608 TLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILDPLAGD 685 (801)
Q Consensus 608 ~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~--~~~~~~~g~~~~~~d~~~~~ 685 (801)
.. ......||+.|+|||++.+..++.++|||||||++|+|+||++||..... ....+..+. ..
T Consensus 155 ~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~---------~~ 219 (323)
T cd05615 155 GV------TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHN---------VS 219 (323)
T ss_pred Cc------cccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC---------CC
Confidence 21 12345699999999999999999999999999999999999999975432 222222221 12
Q ss_pred CCHHHHHHHHHHHHHhhhhCCCCCCCchH
Q 003703 686 WPTFVARRLVDLGLQCCELYGRERPDITP 714 (801)
Q Consensus 686 ~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e 714 (801)
+|...+..+.+++.+||+.+|.+|++..+
T Consensus 220 ~p~~~~~~~~~li~~~l~~~p~~R~~~~~ 248 (323)
T cd05615 220 YPKSLSKEAVSICKGLMTKHPSKRLGCGP 248 (323)
T ss_pred CCccCCHHHHHHHHHHcccCHhhCCCCCC
Confidence 34445678899999999999999998753
No 94
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=4.5e-36 Score=318.57 Aligned_cols=251 Identities=24% Similarity=0.405 Sum_probs=199.1
Q ss_pred ccccceeeecCceEEEEEEEC-----CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEeccccC--------
Q 003703 457 FSESFKVGQGGFGCVYKGEML-----GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACPE-------- 521 (801)
Q Consensus 457 f~~~~~LG~G~fG~Vy~g~~~-----g~~vAiK~l~~~~~--~~~~~f~~E~~il~~l~HpnIV~l~g~~~~-------- 521 (801)
|...+.||+|+||.||+|.+. +..||||+++.... .....+.+|+..+..++||||+++++++..
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 455678999999999999874 36799999875433 233568899999999999999999998732
Q ss_pred CcceeeecCCCCchhhhhhhcC---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecc
Q 003703 522 AWSLVYEYLPNGSLQDRLFRKS---NVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDF 598 (801)
Q Consensus 522 ~~~LV~E~~~~gsL~~~L~~~~---~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DF 598 (801)
..++||||+++|+|..++.... ....+++...+.++.|++.||.|||+.+ |+||||||+||+++.++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRN---FIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchheEEECCCCeEEECCc
Confidence 2579999999999999886532 2246899999999999999999999987 999999999999999999999999
Q ss_pred cceeeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChhH--HHHHhhcCcc
Q 003703 599 GICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKL 675 (801)
Q Consensus 599 Gla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~~--~~~~~~~g~~ 675 (801)
|+++........ .......++..|+|||++.+..++.++|||||||++|||++ |.+||..... ....+..+..
T Consensus 158 g~~~~~~~~~~~----~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~ 233 (273)
T cd05035 158 GLSKKIYSGDYY----RQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNR 233 (273)
T ss_pred cceeeccccccc----cccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC
Confidence 999876543321 11223345778999999988899999999999999999999 8899864432 2222322221
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHHh
Q 003703 676 SSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 723 (801)
Q Consensus 676 ~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~l 723 (801)
. ..+...+..+.+++.+||+.||.+||++. ++.+.|+.+
T Consensus 234 ~--------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~-e~~~~l~~~ 272 (273)
T cd05035 234 L--------KQPEDCLDELYDLMYSCWRADPKDRPTFT-KLREVLENI 272 (273)
T ss_pred C--------CCCcCCCHHHHHHHHHHcCCChhhCcCHH-HHHHHHHhh
Confidence 1 12334566899999999999999999998 777777654
No 95
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=9.2e-37 Score=350.37 Aligned_cols=260 Identities=23% Similarity=0.325 Sum_probs=206.4
Q ss_pred HHHhcCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcccHHHHHHHHHHHhcCC-CCceeeEecccc-------
Q 003703 451 QTATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQ-HPHLVTLLGACP------- 520 (801)
Q Consensus 451 ~~at~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~-HpnIV~l~g~~~------- 520 (801)
.....++.+.+.|.+|||+.||.+++. |..||+|++...+......+.+|+.+|++|+ |+|||.+++...
T Consensus 33 ~Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~ 112 (738)
T KOG1989|consen 33 TVGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNN 112 (738)
T ss_pred EECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCC
Confidence 344566778889999999999999986 4899999998877777788999999999996 999999999431
Q ss_pred --CCcceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecc
Q 003703 521 --EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDF 598 (801)
Q Consensus 521 --~~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DF 598 (801)
-+.+|.||||.||+|-|++..+.... |+..++++|++++|+|+.+||... +||||||||-+||||+.+|+.|||||
T Consensus 113 ~~~EvllLmEyC~gg~Lvd~mn~Rlq~~-lte~eVLkIf~dv~~AVa~mH~~~-pPiIHRDLKiENvLls~~g~~KLCDF 190 (738)
T KOG1989|consen 113 GVWEVLLLMEYCKGGSLVDFMNTRLQTR-LTEDEVLKIFYDVCEAVAAMHYLK-PPIIHRDLKIENVLLSADGNYKLCDF 190 (738)
T ss_pred ceeEEEeehhhccCCcHHHHHHHHHhcc-CChHHHHHHHHHHHHHHHHHhcCC-CccchhhhhhhheEEcCCCCEEeCcc
Confidence 12568999999999999998765444 999999999999999999999998 58999999999999999999999999
Q ss_pred cceeeccCCCCcCC---CccccCCCCCCCCCCCcccc---ccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhhc
Q 003703 599 GICRLVTEDTLYLP---SFHRSTAPKGSFPYADPEYH---RTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSC 672 (801)
Q Consensus 599 Gla~~~~~~~~~~~---~~~~~~~~~Gt~~Y~APE~~---~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~ 672 (801)
|.|........... .....-...-|+.|.|||.+ .+.++++|+|||+|||+||-|+....||+..+. .++..
T Consensus 191 GSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~--laIln 268 (738)
T KOG1989|consen 191 GSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK--LAILN 268 (738)
T ss_pred cccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc--eeEEe
Confidence 99875432211000 00011123468999999965 577899999999999999999999999975432 12333
Q ss_pred CccccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHH
Q 003703 673 GKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELE 721 (801)
Q Consensus 673 g~~~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~ 721 (801)
|++.- ..+ ..++..|.+||..||+.||.+||++.+.+...++
T Consensus 269 g~Y~~------P~~-p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~ 310 (738)
T KOG1989|consen 269 GNYSF------PPF-PNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFE 310 (738)
T ss_pred ccccC------CCC-ccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHH
Confidence 33321 111 3588999999999999999999999954444443
No 96
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=6.2e-37 Score=336.27 Aligned_cols=230 Identities=24% Similarity=0.327 Sum_probs=187.4
Q ss_pred eeeecCceEEEEEEEC--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcC-CCCceeeEeccccC--CcceeeecCCCC
Q 003703 462 KVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKL-QHPHLVTLLGACPE--AWSLVYEYLPNG 533 (801)
Q Consensus 462 ~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~---~~~~~f~~E~~il~~l-~HpnIV~l~g~~~~--~~~LV~E~~~~g 533 (801)
.||+|+||.||++... +..||+|+++.... .....+..|..++..+ +||||++++++|.+ ..++||||+++|
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~g 81 (329)
T cd05588 2 VIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSGG 81 (329)
T ss_pred eEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 6999999999999885 78999999976432 2234578899999988 79999999999844 478999999999
Q ss_pred chhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCCC
Q 003703 534 SLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPS 613 (801)
Q Consensus 534 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~~ 613 (801)
+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 82 ~L~~~~~~~---~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~----- 150 (329)
T cd05588 82 DLMFHMQRQ---RKLPEEHARFYSAEISLALNFLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPG----- 150 (329)
T ss_pred CHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEECcCccccccccCC-----
Confidence 999888654 35899999999999999999999988 9999999999999999999999999987532211
Q ss_pred ccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChh-----------HHHHHhhcCccccccCCC
Q 003703 614 FHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAG-----------EVRRAVSCGKLSSILDPL 682 (801)
Q Consensus 614 ~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~-----------~~~~~~~~g~~~~~~d~~ 682 (801)
.......||+.|+|||++.+..++.++|||||||++|+|+||+.||.... .....+..+.
T Consensus 151 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~-------- 221 (329)
T cd05588 151 -DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQ-------- 221 (329)
T ss_pred -CccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCC--------
Confidence 12234579999999999999999999999999999999999999996321 1111121111
Q ss_pred CCCCCHHHHHHHHHHHHHhhhhCCCCCCCc
Q 003703 683 AGDWPTFVARRLVDLGLQCCELYGRERPDI 712 (801)
Q Consensus 683 ~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~ 712 (801)
...|...+..+.+|+.+||+.||.+||+.
T Consensus 222 -~~~p~~~~~~~~~li~~~L~~dP~~R~~~ 250 (329)
T cd05588 222 -IRIPRSLSVKASSVLKGFLNKDPKERLGC 250 (329)
T ss_pred -CCCCCCCCHHHHHHHHHHhccCHHHcCCC
Confidence 12333456678999999999999999985
No 97
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=1.3e-36 Score=340.59 Aligned_cols=255 Identities=21% Similarity=0.246 Sum_probs=192.3
Q ss_pred CccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccceeee
Q 003703 456 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYE 528 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~---~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E 528 (801)
.|...+.||+|+||.||+|+.. +..||||++..... .....+.+|+.++..++|||||++++++.+ ..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 5778889999999999999885 78999999976432 223468899999999999999999999854 5789999
Q ss_pred cCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCC
Q 003703 529 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDT 608 (801)
Q Consensus 529 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~ 608 (801)
|+++|+|.+++.... .+++..+..++.||+.||.|||..+ |+||||||+||||+.++++||+|||+++.+....
T Consensus 82 ~~~gg~L~~~l~~~~---~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~ 155 (381)
T cd05626 82 YIPGGDMMSLLIRME---VFPEVLARFYIAELTLAIESVHKMG---FIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTH 155 (381)
T ss_pred cCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCcHHHEEECCCCCEEEeeCcCCccccccc
Confidence 999999999987643 5788889999999999999999987 9999999999999999999999999986432110
Q ss_pred Cc-----------------------------------------CCCccccCCCCCCCCCCCccccccCCCCcchhHHhHH
Q 003703 609 LY-----------------------------------------LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFG 647 (801)
Q Consensus 609 ~~-----------------------------------------~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlG 647 (801)
.. ...........||+.|+|||++.+..++.++||||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG 235 (381)
T cd05626 156 NSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVG 235 (381)
T ss_pred ccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehh
Confidence 00 0000011245799999999999988999999999999
Q ss_pred HHHHHHHhCCCCCCChhHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHH--hhhhCCCCCCCchHHHHHH
Q 003703 648 LIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQ--CCELYGRERPDITPSLVKE 719 (801)
Q Consensus 648 vvL~ELltG~~Pf~~~~~~~~~~~~g~~~~~~d~~~~~~~~~~~~~l~~Li~~--Cl~~dP~~RPt~~e~l~~~ 719 (801)
|++|||+||+.||..................+ ... .....+..+.+|+.+ |+..+|..||++.+.+.+.
T Consensus 236 ~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~--~~~-~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp 306 (381)
T cd05626 236 VILFEMLVGQPPFLAPTPTETQLKVINWENTL--HIP-PQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHP 306 (381)
T ss_pred hHHHHHHhCCCCCcCCCHHHHHHHHHcccccc--CCC-CCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCc
Confidence 99999999999997543321111110000000 000 111244567788877 5566667799998655443
No 98
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=4.7e-36 Score=356.92 Aligned_cols=264 Identities=22% Similarity=0.251 Sum_probs=204.2
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcc---cHHHHHHHHHHHhcCCCCceeeEeccccC--Ccceee
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ---GQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVY 527 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~---~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~ 527 (801)
++|...++||+|+||.||+|... |+.||||++...... ....|.+|+.++++++||||++++++|.+ ..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 46888899999999999999875 889999998754322 23468899999999999999999999854 478999
Q ss_pred ecCCCCchhhhhhhcC--------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeeccc
Q 003703 528 EYLPNGSLQDRLFRKS--------NVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFG 599 (801)
Q Consensus 528 E~~~~gsL~~~L~~~~--------~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFG 599 (801)
||++||+|.+++.... ....+++..++.|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~G---IIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKG---VLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchheEEEcCCCCEEEEecC
Confidence 9999999999886421 1234667888999999999999999987 9999999999999999999999999
Q ss_pred ceeeccCCCCc------------CCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHH
Q 003703 600 ICRLVTEDTLY------------LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVR 667 (801)
Q Consensus 600 la~~~~~~~~~------------~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~ 667 (801)
+++........ ...........||+.|+|||++.+..++.++|||||||++|||+||+.||.......
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k 238 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK 238 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh
Confidence 99876211100 001111234579999999999999999999999999999999999999996432211
Q ss_pred HHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHHhhh
Q 003703 668 RAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHV 725 (801)
Q Consensus 668 ~~~~~g~~~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~l~~ 725 (801)
. .....+ .++.........+..+.+++.+|+..||.+||+..+++.+.|+....
T Consensus 239 i-~~~~~i---~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq 292 (932)
T PRK13184 239 I-SYRDVI---LSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQ 292 (932)
T ss_pred h-hhhhhc---cChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 1 111111 11111000123456788999999999999999888889888887643
No 99
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=5.3e-36 Score=315.90 Aligned_cols=244 Identities=28% Similarity=0.442 Sum_probs=198.7
Q ss_pred cCccccceeeecCceEEEEEEECCeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEecccc---CCcceeeecCC
Q 003703 455 CNFSESFKVGQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP---EAWSLVYEYLP 531 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~---~~~~LV~E~~~ 531 (801)
.+|...+.||+|+||.||+|...|..||+|.+.... ....|.+|+.++++++|+|++++++++. +..++||||++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~ 83 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA 83 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEcCCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCC
Confidence 357777889999999999999999999999986543 3456889999999999999999999752 34789999999
Q ss_pred CCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcC
Q 003703 532 NGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYL 611 (801)
Q Consensus 532 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~ 611 (801)
+|+|.+++..... ..+++..++.++.+++.||.|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 84 ~~~L~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~--- 156 (256)
T cd05082 84 KGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLEANN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ--- 156 (256)
T ss_pred CCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhCC---EeccccchheEEEcCCCcEEecCCccceeccccC---
Confidence 9999999865432 45889999999999999999999987 9999999999999999999999999988653321
Q ss_pred CCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChh--HHHHHhhcCccccccCCCCCCCCH
Q 003703 612 PSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAG--EVRRAVSCGKLSSILDPLAGDWPT 688 (801)
Q Consensus 612 ~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~--~~~~~~~~g~~~~~~d~~~~~~~~ 688 (801)
....++..|+|||++.+..++.++|||||||++|+|++ |+.||.... .....+..+... ..+.
T Consensus 157 ------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~--------~~~~ 222 (256)
T cd05082 157 ------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKM--------DAPD 222 (256)
T ss_pred ------CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCC--------CCCC
Confidence 23345678999999998899999999999999999998 999986432 222223222111 1223
Q ss_pred HHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHH
Q 003703 689 FVARRLVDLGLQCCELYGRERPDITPSLVKELEQ 722 (801)
Q Consensus 689 ~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~ 722 (801)
..+..+.+++.+||+.+|.+||++. .+...|+.
T Consensus 223 ~~~~~~~~li~~~l~~~p~~Rpt~~-~l~~~l~~ 255 (256)
T cd05082 223 GCPPVVYDVMKQCWHLDAATRPSFL-QLREQLEH 255 (256)
T ss_pred CCCHHHHHHHHHHhcCChhhCcCHH-HHHHHHhc
Confidence 3456889999999999999999999 67777664
No 100
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=6.4e-36 Score=316.02 Aligned_cols=249 Identities=32% Similarity=0.466 Sum_probs=200.1
Q ss_pred cCccccceeeecCceEEEEEEEC-CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccccC-CcceeeecCCC
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML-GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACPE-AWSLVYEYLPN 532 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~-g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~-~~~LV~E~~~~ 532 (801)
++|...++||+|+||.||+|... +..||+|.+..... ....|.+|+.++.+++|||++++++++.+ ..+++|||+++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e~~~~ 84 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVSEEPIYIVTEYMSK 84 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEECCCCcEEEEEecCC
Confidence 35677788999999999999875 67899999876443 34568999999999999999999998744 57899999999
Q ss_pred CchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCC
Q 003703 533 GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLP 612 (801)
Q Consensus 533 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~ 612 (801)
++|.+++.... ...+++..+..++.+++.||.|||+.+ |+||||||+||+++.++.++|+|||++..+......
T Consensus 85 ~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~-- 158 (260)
T cd05070 85 GSLLDFLKDGE-GRALKLPNLVDMAAQVAAGMAYIERMN---YIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYT-- 158 (260)
T ss_pred CcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEEeCCceEEeCCceeeeeccCcccc--
Confidence 99999986543 245899999999999999999999987 999999999999999999999999999876543211
Q ss_pred CccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChhH--HHHHhhcCccccccCCCCCCCCHH
Q 003703 613 SFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWPTF 689 (801)
Q Consensus 613 ~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~~--~~~~~~~g~~~~~~d~~~~~~~~~ 689 (801)
......++..|+|||++.+..++.++||||||+++|+|++ |.+||..... ....+..+. ....+..
T Consensus 159 ---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~--------~~~~~~~ 227 (260)
T cd05070 159 ---ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGY--------RMPCPQD 227 (260)
T ss_pred ---cccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC--------CCCCCCc
Confidence 1123346678999999988899999999999999999999 8999964332 222222111 1122334
Q ss_pred HHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHH
Q 003703 690 VARRLVDLGLQCCELYGRERPDITPSLVKELEQ 722 (801)
Q Consensus 690 ~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~ 722 (801)
.+..+.+|+.+|+..+|.+|||+. .+...|+.
T Consensus 228 ~~~~~~~li~~~l~~~p~~Rpt~~-~l~~~l~~ 259 (260)
T cd05070 228 CPISLHELMLQCWKKDPEERPTFE-YLQSFLED 259 (260)
T ss_pred CCHHHHHHHHHHcccCcccCcCHH-HHHHHHhc
Confidence 456799999999999999999998 67676653
No 101
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=1.8e-36 Score=331.69 Aligned_cols=239 Identities=26% Similarity=0.342 Sum_probs=189.2
Q ss_pred eeeecCceEEEEEEEC--CeEEEEEEeccCCc---ccHHHHHHHHH-HHhcCCCCceeeEecccc--CCcceeeecCCCC
Q 003703 462 KVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVR-VLSKLQHPHLVTLLGACP--EAWSLVYEYLPNG 533 (801)
Q Consensus 462 ~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~---~~~~~f~~E~~-il~~l~HpnIV~l~g~~~--~~~~LV~E~~~~g 533 (801)
.||+|+||.||+|+.. |..||||++..... .....+..|.. ++..++||||+++++++. +..++||||+++|
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~g 81 (323)
T cd05575 2 VIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNGG 81 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCCC
Confidence 6999999999999884 88999999865422 22234555554 467899999999998884 3578999999999
Q ss_pred chhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCCC
Q 003703 534 SLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPS 613 (801)
Q Consensus 534 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~~ 613 (801)
+|..++.... .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 82 ~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~g---ivH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~----- 150 (323)
T cd05575 82 ELFFHLQRER---SFPEPRARFYAAEIASALGYLHSLN---IIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHS----- 150 (323)
T ss_pred CHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCCCcEEEeccCCCcccccCC-----
Confidence 9999886543 5788999999999999999999988 9999999999999999999999999987543221
Q ss_pred ccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhH--HHHHhhcCccccccCCCCCCCCHHHH
Q 003703 614 FHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWPTFVA 691 (801)
Q Consensus 614 ~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~--~~~~~~~g~~~~~~d~~~~~~~~~~~ 691 (801)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||...+. ....+..+.. ..+...+
T Consensus 151 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~---------~~~~~~~ 220 (323)
T cd05575 151 -KTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPL---------RLKPNIS 220 (323)
T ss_pred -CccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCC---------CCCCCCC
Confidence 123455799999999999999999999999999999999999999974332 2222222211 1222346
Q ss_pred HHHHHHHHHhhhhCCCCCCCchHHHHHHHH
Q 003703 692 RRLVDLGLQCCELYGRERPDITPSLVKELE 721 (801)
Q Consensus 692 ~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~ 721 (801)
..+.+++.+|++.||.+||+..+.+.+.++
T Consensus 221 ~~~~~li~~~l~~~p~~R~~~~~~~~~il~ 250 (323)
T cd05575 221 VSARHLLEGLLQKDRTKRLGAKDDFLEIKN 250 (323)
T ss_pred HHHHHHHHHHhhcCHHhCCCCCCCHHHHHc
Confidence 678999999999999999999744444443
No 102
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=1.3e-36 Score=331.74 Aligned_cols=234 Identities=27% Similarity=0.377 Sum_probs=188.2
Q ss_pred eeeecCceEEEEEEEC--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcC-CCCceeeEeccccC--CcceeeecCCCC
Q 003703 462 KVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKL-QHPHLVTLLGACPE--AWSLVYEYLPNG 533 (801)
Q Consensus 462 ~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~---~~~~~f~~E~~il~~l-~HpnIV~l~g~~~~--~~~LV~E~~~~g 533 (801)
.||+|+||.||+|... |..||+|+++.... .....+..|..++..+ +||||+++++++.+ ..++||||+++|
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g 81 (316)
T cd05620 2 VLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNGG 81 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCCC
Confidence 6999999999999885 78999999975421 2334566788888754 89999999998844 478999999999
Q ss_pred chhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCCC
Q 003703 534 SLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPS 613 (801)
Q Consensus 534 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~~ 613 (801)
+|..++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 82 ~L~~~i~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~----- 150 (316)
T cd05620 82 DLMFHIQDK---GRFDLYRATFYAAEIVCGLQFLHSKG---IIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGD----- 150 (316)
T ss_pred cHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEeCccCCCeecccCC-----
Confidence 999988654 35788999999999999999999988 9999999999999999999999999987532211
Q ss_pred ccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhH--HHHHhhcCccccccCCCCCCCCHHHH
Q 003703 614 FHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWPTFVA 691 (801)
Q Consensus 614 ~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~--~~~~~~~g~~~~~~d~~~~~~~~~~~ 691 (801)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ....+..+. ..++...+
T Consensus 151 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~---------~~~~~~~~ 220 (316)
T cd05620 151 -NRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDT---------PHYPRWIT 220 (316)
T ss_pred -CceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC---------CCCCCCCC
Confidence 123456799999999999999999999999999999999999999964432 222222111 12233355
Q ss_pred HHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 692 RRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 692 ~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
..+.+|+.+||+.||.+||++.+.+
T Consensus 221 ~~~~~li~~~l~~dP~~R~~~~~~~ 245 (316)
T cd05620 221 KESKDILEKLFERDPTRRLGVVGNI 245 (316)
T ss_pred HHHHHHHHHHccCCHHHcCCChHHH
Confidence 6788999999999999999986444
No 103
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=4.5e-37 Score=335.56 Aligned_cols=238 Identities=29% Similarity=0.387 Sum_probs=193.1
Q ss_pred ceeeecCceEEEEEEE-----CCeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEeccccC--CcceeeecCC
Q 003703 461 FKVGQGGFGCVYKGEM-----LGRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYLP 531 (801)
Q Consensus 461 ~~LG~G~fG~Vy~g~~-----~g~~vAiK~l~~~~~--~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E~~~ 531 (801)
+.||+|+||.||+++. .|..||+|++..... .....+.+|+.+|.+++||||+++++++.+ ..++||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 4699999999999865 378999999975432 233457789999999999999999998844 4789999999
Q ss_pred CCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcC
Q 003703 532 NGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYL 611 (801)
Q Consensus 532 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~ 611 (801)
+|+|.+++... ..+++..+..|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 82 ~~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~-- 153 (318)
T cd05582 82 GGDLFTRLSKE---VMFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK-- 153 (318)
T ss_pred CCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHeEECCCCcEEEeeccCCcccCCCCC--
Confidence 99999988654 35889999999999999999999988 99999999999999999999999999886543221
Q ss_pred CCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHH--HHHhhcCccccccCCCCCCCCHH
Q 003703 612 PSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEV--RRAVSCGKLSSILDPLAGDWPTF 689 (801)
Q Consensus 612 ~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~--~~~~~~g~~~~~~d~~~~~~~~~ 689 (801)
......||+.|+|||++.+..++.++|||||||++|||+||+.||...... ...+..+. ...|..
T Consensus 154 ----~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~---------~~~p~~ 220 (318)
T cd05582 154 ----KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAK---------LGMPQF 220 (318)
T ss_pred ----ceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCC---------CCCCCC
Confidence 223457999999999999888999999999999999999999999754332 12222221 123344
Q ss_pred HHHHHHHHHHHhhhhCCCCCCCchHHHHHH
Q 003703 690 VARRLVDLGLQCCELYGRERPDITPSLVKE 719 (801)
Q Consensus 690 ~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~ 719 (801)
.+..+.+|+.+||+.||.+||++.+.++..
T Consensus 221 ~~~~~~~li~~~l~~~P~~R~~a~~~~~~~ 250 (318)
T cd05582 221 LSPEAQSLLRALFKRNPANRLGAGPDGVEE 250 (318)
T ss_pred CCHHHHHHHHHHhhcCHhHcCCCCCCCHHH
Confidence 567889999999999999999987543333
No 104
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=5.1e-36 Score=315.04 Aligned_cols=242 Identities=26% Similarity=0.447 Sum_probs=192.2
Q ss_pred eeeecCceEEEEEEE--CCeEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEeccccC--CcceeeecCCCCchh
Q 003703 462 KVGQGGFGCVYKGEM--LGRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYLPNGSLQ 536 (801)
Q Consensus 462 ~LG~G~fG~Vy~g~~--~g~~vAiK~l~~~~~-~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E~~~~gsL~ 536 (801)
.||+|+||.||+|++ .|+.||+|.+..... .....|.+|+.++.+++||||++++++|.. ..++||||+++++|.
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 81 (252)
T cd05084 2 RIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFL 81 (252)
T ss_pred ccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcHH
Confidence 599999999999987 488999998765432 334568999999999999999999999843 478999999999999
Q ss_pred hhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCCCccc
Q 003703 537 DRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHR 616 (801)
Q Consensus 537 ~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~~~~~ 616 (801)
+++.... ..+++..++.++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++.......... .
T Consensus 82 ~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~----~ 152 (252)
T cd05084 82 TFLRTEG--PRLKVKELIQMVENAAAGMEYLESKH---CIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYAS----T 152 (252)
T ss_pred HHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchheEEEcCCCcEEECccccCcccccccccc----c
Confidence 9986543 46889999999999999999999987 9999999999999999999999999987654322110 0
Q ss_pred cCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChhH--HHHHhhcCccccccCCCCCCCCHHHHHH
Q 003703 617 STAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWPTFVARR 693 (801)
Q Consensus 617 ~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~~--~~~~~~~g~~~~~~d~~~~~~~~~~~~~ 693 (801)
.....++..|+|||++.++.++.++|||||||++|||++ |..||..... ....+..+. ....+...+..
T Consensus 153 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~ 224 (252)
T cd05084 153 GGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGV--------RLPCPELCPDA 224 (252)
T ss_pred CCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCC--------CCCCcccCCHH
Confidence 112234567999999999999999999999999999998 8999864332 222222211 11223344568
Q ss_pred HHHHHHHhhhhCCCCCCCchHHHHHHHH
Q 003703 694 LVDLGLQCCELYGRERPDITPSLVKELE 721 (801)
Q Consensus 694 l~~Li~~Cl~~dP~~RPt~~e~l~~~L~ 721 (801)
+.+|+.+||+.+|.+||++. ++.+.|+
T Consensus 225 ~~~li~~~l~~~p~~Rps~~-~~~~~l~ 251 (252)
T cd05084 225 VYRLMERCWEYDPGQRPSFS-TVHQELQ 251 (252)
T ss_pred HHHHHHHHcCCChhhCcCHH-HHHHHHh
Confidence 89999999999999999999 6666654
No 105
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=6.1e-36 Score=316.30 Aligned_cols=245 Identities=27% Similarity=0.453 Sum_probs=195.9
Q ss_pred eeeecCceEEEEEEEC----CeEEEEEEeccCCcc-cHHHHHHHHHHHhcCCCCceeeEeccccC-CcceeeecCCCCch
Q 003703 462 KVGQGGFGCVYKGEML----GRTVAIKMLYSHNMQ-GQLEFQQEVRVLSKLQHPHLVTLLGACPE-AWSLVYEYLPNGSL 535 (801)
Q Consensus 462 ~LG~G~fG~Vy~g~~~----g~~vAiK~l~~~~~~-~~~~f~~E~~il~~l~HpnIV~l~g~~~~-~~~LV~E~~~~gsL 535 (801)
.||+|+||.||+|.+. +..||+|++...... ....|.+|+.++.+++||||++++++|.. ..++||||+++|+|
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~lv~e~~~~~~L 81 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEAEALMLVMEMASGGPL 81 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcCCCeEEEEEeCCCCCH
Confidence 3899999999999764 457999998765332 34568999999999999999999999854 57899999999999
Q ss_pred hhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCCCcc
Q 003703 536 QDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFH 615 (801)
Q Consensus 536 ~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~~~~ 615 (801)
.+++.... ..+++..+++++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||+++......... .
T Consensus 82 ~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~---~ 153 (257)
T cd05115 82 NKFLSGKK--DEITVSNVVELMHQVSMGMKYLEGKN---FVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYY---K 153 (257)
T ss_pred HHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhcC---eeecccchheEEEcCCCcEEeccCCccccccCCccce---e
Confidence 99886543 46899999999999999999999987 9999999999999999999999999998654332211 1
Q ss_pred ccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChh--HHHHHhhcCccccccCCCCCCCCHHHHH
Q 003703 616 RSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAG--EVRRAVSCGKLSSILDPLAGDWPTFVAR 692 (801)
Q Consensus 616 ~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~--~~~~~~~~g~~~~~~d~~~~~~~~~~~~ 692 (801)
......+++.|+|||++.+..++.++|||||||++|||++ |..||.... .+...+..+.. ...+...+.
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~--------~~~~~~~~~ 225 (257)
T cd05115 154 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKR--------LDCPAECPP 225 (257)
T ss_pred ccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCC--------CCCCCCCCH
Confidence 1222344678999999988889999999999999999996 999996433 23333333321 122333457
Q ss_pred HHHHHHHHhhhhCCCCCCCchHHHHHHHHHh
Q 003703 693 RLVDLGLQCCELYGRERPDITPSLVKELEQL 723 (801)
Q Consensus 693 ~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~l 723 (801)
.+.+++.+||..+|.+||++. .+.+.|+.+
T Consensus 226 ~l~~li~~c~~~~~~~Rp~~~-~i~~~l~~~ 255 (257)
T cd05115 226 EMYALMKDCWIYKWEDRPNFA-KVEERMRTY 255 (257)
T ss_pred HHHHHHHHHcCCChhhCcCHH-HHHHHHhhh
Confidence 888999999999999999998 677777653
No 106
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=2.1e-36 Score=330.81 Aligned_cols=230 Identities=25% Similarity=0.369 Sum_probs=187.2
Q ss_pred eeeecCceEEEEEEEC--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcC-CCCceeeEeccccC--CcceeeecCCCC
Q 003703 462 KVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKL-QHPHLVTLLGACPE--AWSLVYEYLPNG 533 (801)
Q Consensus 462 ~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~---~~~~~f~~E~~il~~l-~HpnIV~l~g~~~~--~~~LV~E~~~~g 533 (801)
.||+|+||.||+|+.. |..||||++..... .....+..|..++..+ +||||+++++++.+ ..++||||+++|
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 81 (321)
T cd05591 2 VLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNGG 81 (321)
T ss_pred ccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCCC
Confidence 5999999999999886 67999999875432 2334577889998866 79999999999853 578999999999
Q ss_pred chhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCCC
Q 003703 534 SLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPS 613 (801)
Q Consensus 534 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~~ 613 (801)
+|...+.... .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 82 ~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~---- 151 (321)
T cd05591 82 DLMFQIQRSR---KFDEPRSRFYAAEVTLALMFLHRHG---VIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGV---- 151 (321)
T ss_pred cHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEeecccceecccCCc----
Confidence 9998886543 5788999999999999999999988 99999999999999999999999999876432221
Q ss_pred ccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhH--HHHHhhcCccccccCCCCCCCCHHHH
Q 003703 614 FHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWPTFVA 691 (801)
Q Consensus 614 ~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~--~~~~~~~g~~~~~~d~~~~~~~~~~~ 691 (801)
......||+.|+|||++.+..++.++|||||||++|||+||+.||..... ....+..+.. .+|...+
T Consensus 152 --~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~---------~~p~~~~ 220 (321)
T cd05591 152 --TTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDV---------LYPVWLS 220 (321)
T ss_pred --cccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC---------CCCCCCC
Confidence 12345799999999999999999999999999999999999999975432 2222222211 1233345
Q ss_pred HHHHHHHHHhhhhCCCCCCCc
Q 003703 692 RRLVDLGLQCCELYGRERPDI 712 (801)
Q Consensus 692 ~~l~~Li~~Cl~~dP~~RPt~ 712 (801)
..+.+|+.+||+.||.+||+.
T Consensus 221 ~~~~~ll~~~L~~dp~~R~~~ 241 (321)
T cd05591 221 KEAVSILKAFMTKNPNKRLGC 241 (321)
T ss_pred HHHHHHHHHHhccCHHHcCCC
Confidence 688999999999999999954
No 107
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=3.7e-36 Score=334.64 Aligned_cols=251 Identities=23% Similarity=0.321 Sum_probs=189.5
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccceee
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVY 527 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~---~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~ 527 (801)
++|...+.||+|+||.||++... +..||||++..... .....+.+|+.++..++||||+++++++.+ ..+|||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 36888899999999999999875 78999999975432 223457889999999999999999999854 478999
Q ss_pred ecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCC
Q 003703 528 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 607 (801)
Q Consensus 528 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~ 607 (801)
||+++|+|.+++.... .+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.+...
T Consensus 81 E~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH~~g---ivHrDlKp~NILi~~~~~vkL~DFGla~~~~~~ 154 (363)
T cd05628 81 EFLPGGDMMTLLMKKD---TLTEEETQFYIAETVLAIDSIHQLG---FIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKA 154 (363)
T ss_pred cCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCCCCEEEeeccCccccccc
Confidence 9999999999987643 5889999999999999999999988 999999999999999999999999999865321
Q ss_pred CCcC-----------------------------CCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCC
Q 003703 608 TLYL-----------------------------PSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRL 658 (801)
Q Consensus 608 ~~~~-----------------------------~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~ 658 (801)
.... .........+||+.|+|||++.+..++.++|||||||++|||++|+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~ 234 (363)
T cd05628 155 HRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYP 234 (363)
T ss_pred ccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCC
Confidence 1000 00001134579999999999999999999999999999999999999
Q ss_pred CCCChhH--HHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhh--hCCCCCCCchHHH
Q 003703 659 PVGLAGE--VRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCE--LYGRERPDITPSL 716 (801)
Q Consensus 659 Pf~~~~~--~~~~~~~g~~~~~~d~~~~~~~~~~~~~l~~Li~~Cl~--~dP~~RPt~~e~l 716 (801)
||..... ....+...... +..+.. . ..+..+.+++.+++. .++..||++.+.+
T Consensus 235 Pf~~~~~~~~~~~i~~~~~~-~~~p~~--~--~~s~~~~~li~~l~~~~~~r~~r~~~~ei~ 291 (363)
T cd05628 235 PFCSETPQETYKKVMNWKET-LIFPPE--V--PISEKAKDLILRFCCEWEHRIGAPGVEEIK 291 (363)
T ss_pred CCCCCCHHHHHHHHHcCcCc-ccCCCc--C--CCCHHHHHHHHHHcCChhhcCCCCCHHHHh
Confidence 9974332 22222221111 111111 1 134566677776443 2334567877433
No 108
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.3e-37 Score=335.56 Aligned_cols=248 Identities=22% Similarity=0.297 Sum_probs=207.4
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCccc--HHHHHHHHHHHhcCCCCceeeEeccccC--C-cceee
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQG--QLEFQQEVRVLSKLQHPHLVTLLGACPE--A-WSLVY 527 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~--~~~f~~E~~il~~l~HpnIV~l~g~~~~--~-~~LV~ 527 (801)
++|...++||+|+||.++..+++ +..|++|.+....... .....+|+.++++++|||||.+++.|.+ . .+|||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 45677788999999999987765 7899999987665432 3357899999999999999999999854 3 67999
Q ss_pred ecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCC
Q 003703 528 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 607 (801)
Q Consensus 528 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~ 607 (801)
+|++||+|.+.+.+.. ...|+.+.++.|+.|++.|+.|||+.. |+|||||+.||+++.++.|||+|||+|+.+...
T Consensus 84 ~Y~eGg~l~~~i~~~k-~~~f~E~~i~~~~~Q~~~av~ylH~~~---iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~ 159 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQK-GVLFPEERILKWFVQILLAVNYLHENR---VLHRDLKCANIFLTKDKKVKLGDFGLAKILNPE 159 (426)
T ss_pred eecCCCCHHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHHhhh---hhcccchhhhhhccccCceeecchhhhhhcCCc
Confidence 9999999999998765 456889999999999999999999876 999999999999999999999999999998765
Q ss_pred CCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHH--HHHhhcCccccccCCCCCC
Q 003703 608 TLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEV--RRAVSCGKLSSILDPLAGD 685 (801)
Q Consensus 608 ~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~--~~~~~~g~~~~~~d~~~~~ 685 (801)
.. .....+||+.||+||.+.+.+|+.|+|||||||++|||++-+++|...+.. ...+..+. ++|
T Consensus 160 ~~------~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~----~~P---- 225 (426)
T KOG0589|consen 160 DS------LASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGL----YSP---- 225 (426)
T ss_pred hh------hhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhcc----CCC----
Confidence 42 245678999999999999999999999999999999999999999754432 12222222 233
Q ss_pred CCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHH
Q 003703 686 WPTFVARRLVDLGLQCCELYGRERPDITPSLVKEL 720 (801)
Q Consensus 686 ~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L 720 (801)
.|..++..+..|+..|+..+|..||+..+.+.+.+
T Consensus 226 lp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P~ 260 (426)
T KOG0589|consen 226 LPSMYSSELRSLVKSMLRKNPEHRPSALELLRRPH 260 (426)
T ss_pred CCccccHHHHHHHHHHhhcCCccCCCHHHHhhChh
Confidence 34556778999999999999999999997665533
No 109
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=3.3e-36 Score=319.95 Aligned_cols=249 Identities=26% Similarity=0.361 Sum_probs=196.7
Q ss_pred HHhcCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcccHHHHHHHHHHHhcC-CCCceeeEeccccC-------
Q 003703 452 TATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKL-QHPHLVTLLGACPE------- 521 (801)
Q Consensus 452 ~at~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~~~~f~~E~~il~~l-~HpnIV~l~g~~~~------- 521 (801)
.+++.|...+.||+|+||.||+|... +..||+|++.... .....+.+|+.++.++ +||||++++++|..
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 45677888889999999999999875 7899999986543 3445788999999998 79999999998742
Q ss_pred -CcceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccc
Q 003703 522 -AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGI 600 (801)
Q Consensus 522 -~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGl 600 (801)
..++||||+++|+|.+++.... ...+++..+..++.|++.||.|||+.+ |+|+||||+||+++.++.+||+|||+
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~---ivh~dl~~~nili~~~~~~~l~Dfg~ 157 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKNTK-GNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGV 157 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHEEECCCCCEEEccCCC
Confidence 3579999999999999887532 246889999999999999999999987 99999999999999999999999999
Q ss_pred eeeccCCCCcCCCccccCCCCCCCCCCCccccc-----cCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhhcCcc
Q 003703 601 CRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHR-----TGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKL 675 (801)
Q Consensus 601 a~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~-----~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~g~~ 675 (801)
+....... .......|++.|+|||++. ...++.++|||||||++|||++|+.||..............
T Consensus 158 ~~~~~~~~------~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~- 230 (272)
T cd06637 158 SAQLDRTV------GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPR- 230 (272)
T ss_pred ceeccccc------ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhc-
Confidence 98754321 1234567999999999885 34688899999999999999999999964433222221111
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 676 SSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 676 ~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
.+.....+...+..+.+|+.+||..+|.+||++.+.+
T Consensus 231 ----~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il 267 (272)
T cd06637 231 ----NPAPRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLM 267 (272)
T ss_pred ----CCCCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHh
Confidence 0000011112345789999999999999999998543
No 110
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=5.3e-36 Score=316.41 Aligned_cols=245 Identities=28% Similarity=0.485 Sum_probs=196.7
Q ss_pred CccccceeeecCceEEEEEEECC-eEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccccC--CcceeeecCCC
Q 003703 456 NFSESFKVGQGGFGCVYKGEMLG-RTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYLPN 532 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~g-~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E~~~~ 532 (801)
+|.....||+|+||.||+|...+ ..||+|.+..... ....|.+|+.++.+++||||++++++|.+ ..++||||+++
T Consensus 5 ~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd05113 5 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSN 83 (256)
T ss_pred HeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCcc-cHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCC
Confidence 46667789999999999998864 4699999875433 34578999999999999999999999854 46899999999
Q ss_pred CchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCC
Q 003703 533 GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLP 612 (801)
Q Consensus 533 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~ 612 (801)
|+|.+++.... ..+++..++.++.+|+.||.|||+.+ ++|+||||+|||++.++.+||+|||+++.......
T Consensus 84 ~~l~~~i~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~--- 155 (256)
T cd05113 84 GCLLNYLREHG--KRFQPSQLLEMCKDVCEGMAYLESKQ---FIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEY--- 155 (256)
T ss_pred CcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccCcceEEEcCCCCEEECCCccceecCCCce---
Confidence 99999886543 36899999999999999999999987 99999999999999999999999999987643321
Q ss_pred CccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChhH--HHHHhhcCccccccCCCCCCCCHH
Q 003703 613 SFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWPTF 689 (801)
Q Consensus 613 ~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~~--~~~~~~~g~~~~~~d~~~~~~~~~ 689 (801)
.......++..|++||++.+..++.++|||||||++|+|+| |..||..... +...+..+... ..+..
T Consensus 156 --~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~--------~~~~~ 225 (256)
T cd05113 156 --TSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRL--------YRPHL 225 (256)
T ss_pred --eecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCC--------CCCCC
Confidence 11223346778999999988889999999999999999999 9999964332 22233222211 11222
Q ss_pred HHHHHHHHHHHhhhhCCCCCCCchHHHHHHH
Q 003703 690 VARRLVDLGLQCCELYGRERPDITPSLVKEL 720 (801)
Q Consensus 690 ~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L 720 (801)
.+..+.+++.+||+.+|.+||++. .++..|
T Consensus 226 ~~~~~~~li~~cl~~~p~~Rp~~~-~ll~~~ 255 (256)
T cd05113 226 ASEKVYAIMYSCWHEKAEERPTFQ-QLLSSI 255 (256)
T ss_pred CCHHHHHHHHHHcCCCcccCCCHH-HHHHhh
Confidence 456889999999999999999998 454443
No 111
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=4.6e-36 Score=321.37 Aligned_cols=255 Identities=27% Similarity=0.399 Sum_probs=197.5
Q ss_pred cccceeeecCceEEEEEEE------CCeEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEeccccC----Cccee
Q 003703 458 SESFKVGQGGFGCVYKGEM------LGRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACPE----AWSLV 526 (801)
Q Consensus 458 ~~~~~LG~G~fG~Vy~g~~------~g~~vAiK~l~~~~~-~~~~~f~~E~~il~~l~HpnIV~l~g~~~~----~~~LV 526 (801)
.....||+|+||.||++.. .+..||+|.+..... .....|.+|+.+|..++||||++++++|.. ..++|
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 86 (283)
T cd05080 7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLI 86 (283)
T ss_pred eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEE
Confidence 6778899999999988753 367899999876533 334568899999999999999999998743 36799
Q ss_pred eecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccC
Q 003703 527 YEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTE 606 (801)
Q Consensus 527 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~ 606 (801)
|||+++|+|.+++... .+++..++.|+.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 87 ~e~~~~~~l~~~~~~~----~l~~~~~~~i~~~l~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~ 159 (283)
T cd05080 87 MEYVPLGSLRDYLPKH----KLNLAQLLLFAQQICEGMAYLHSQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE 159 (283)
T ss_pred ecCCCCCCHHHHHHHc----CCCHHHHHHHHHHHHHHHHHHHHCC---eeccccChheEEEcCCCcEEEeecccccccCC
Confidence 9999999999988653 4899999999999999999999987 99999999999999999999999999987654
Q ss_pred CCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhH-HHHHhh--c-----Cccccc
Q 003703 607 DTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE-VRRAVS--C-----GKLSSI 678 (801)
Q Consensus 607 ~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~-~~~~~~--~-----g~~~~~ 678 (801)
..... .......++..|+|||++....++.++|||||||++|||+||+.||..... ...... . ..+...
T Consensus 160 ~~~~~---~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (283)
T cd05080 160 GHEYY---RVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIEL 236 (283)
T ss_pred cchhh---ccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhh
Confidence 32110 111233456779999999888999999999999999999999999864322 111110 0 011111
Q ss_pred cCCC-CCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHHh
Q 003703 679 LDPL-AGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 723 (801)
Q Consensus 679 ~d~~-~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~l 723 (801)
++.. ....+...+..+.+++.+||+.+|.+||++. .++..|+.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~-~i~~~l~~~ 281 (283)
T cd05080 237 LERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFR-SLIPILKEM 281 (283)
T ss_pred hhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHH-HHHHHHHHh
Confidence 1111 1112333456899999999999999999999 777887765
No 112
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=7.2e-36 Score=321.16 Aligned_cols=253 Identities=28% Similarity=0.440 Sum_probs=200.3
Q ss_pred CccccceeeecCceEEEEEEEC-------CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEecccc--CCcce
Q 003703 456 NFSESFKVGQGGFGCVYKGEML-------GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSL 525 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~-------g~~vAiK~l~~~~~-~~~~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~L 525 (801)
+|.....||+|+||.||+|... ...+|+|.+..... .....+.+|+.++..++||||++++++|. +..++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 4667788999999999999863 25699998875543 23456889999999999999999999884 35789
Q ss_pred eeecCCCCchhhhhhhcC---------------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCC
Q 003703 526 VYEYLPNGSLQDRLFRKS---------------------NVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQN 584 (801)
Q Consensus 526 V~E~~~~gsL~~~L~~~~---------------------~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~N 584 (801)
+|||+++|+|.+++.... ....+++..++.++.|++.||.|||+.+ |+||||||+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---ivH~dikp~n 157 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMK---LVHRDLAARN 157 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCC---eehhhhhhhe
Confidence 999999999999876421 1235889999999999999999999987 9999999999
Q ss_pred eeecCCCCeeeecccceeeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCCh
Q 003703 585 ILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLA 663 (801)
Q Consensus 585 ILLd~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~ 663 (801)
||++.++.+||+|||+++........ .......++..|+|||++.+..++.++||||||+++|||+| |..||...
T Consensus 158 ill~~~~~~kl~dfg~~~~~~~~~~~----~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~ 233 (290)
T cd05045 158 VLVAEGRKMKISDFGLSRDVYEEDSY----VKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI 233 (290)
T ss_pred EEEcCCCcEEeccccccccccCccch----hcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCC
Confidence 99999999999999999865433211 11233456778999999988899999999999999999999 99999643
Q ss_pred h--HHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHHhh
Q 003703 664 G--EVRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLH 724 (801)
Q Consensus 664 ~--~~~~~~~~g~~~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~l~ 724 (801)
. .+...+..+.. ...+...+..+.+++.+||+.+|.+||++. ++...|+.+-
T Consensus 234 ~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~-~i~~~l~~~~ 287 (290)
T cd05045 234 APERLFNLLKTGYR--------MERPENCSEEMYNLMLTCWKQEPDKRPTFA-DISKELEKMM 287 (290)
T ss_pred CHHHHHHHHhCCCC--------CCCCCCCCHHHHHHHHHHccCCcccCCCHH-HHHHHHHHHH
Confidence 2 23333322211 112233456889999999999999999999 7888887653
No 113
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=7.9e-37 Score=335.26 Aligned_cols=246 Identities=25% Similarity=0.309 Sum_probs=195.6
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccceee
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVY 527 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~---~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~ 527 (801)
++|.....||+|+||.||++... |..||||+++.... .....+.+|+.++..++||||+++++++.+ ..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 36888899999999999999875 88999999976432 233458899999999999999999988844 478999
Q ss_pred ecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCC
Q 003703 528 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 607 (801)
Q Consensus 528 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~ 607 (801)
||+++|+|.+++.... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++..+...
T Consensus 81 e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~qi~~aL~~lH~~~---i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 155 (330)
T cd05601 81 EYQPGGDLLSLLNRYE--DQFDEDMAQFYLAELVLAIHSVHQMG---YVHRDIKPENVLIDRTGHIKLADFGSAARLTAN 155 (330)
T ss_pred CCCCCCCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEcccCchHheEECCCCCEEeccCCCCeECCCC
Confidence 9999999999987653 36889999999999999999999988 999999999999999999999999999876543
Q ss_pred CCcCCCccccCCCCCCCCCCCccccc------cCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHH--HHhhcCcccccc
Q 003703 608 TLYLPSFHRSTAPKGSFPYADPEYHR------TGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVR--RAVSCGKLSSIL 679 (801)
Q Consensus 608 ~~~~~~~~~~~~~~Gt~~Y~APE~~~------~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~--~~~~~g~~~~~~ 679 (801)
... ......||+.|+|||++. ...++.++|||||||++|||++|+.||....... ..+.... ..+
T Consensus 156 ~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~--~~~ 228 (330)
T cd05601 156 KMV-----NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQ--RFL 228 (330)
T ss_pred Cce-----eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCC--Ccc
Confidence 211 123457999999999886 4568899999999999999999999996443321 1111111 111
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 680 DPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 680 d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
. ... ....+..+.+|+..|+. +|.+||++.+.+
T Consensus 229 ~--~~~-~~~~~~~~~~li~~ll~-~p~~R~t~~~l~ 261 (330)
T cd05601 229 K--FPE-DPKVSSDFLDLIQSLLC-GQKERLGYEGLC 261 (330)
T ss_pred C--CCC-CCCCCHHHHHHHHHHcc-ChhhCCCHHHHh
Confidence 0 001 11245678899999998 999999998544
No 114
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=5.3e-36 Score=318.06 Aligned_cols=252 Identities=26% Similarity=0.380 Sum_probs=200.7
Q ss_pred HHHHHhcCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccc
Q 003703 449 DLQTATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWS 524 (801)
Q Consensus 449 el~~at~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~ 524 (801)
|++.+++++.....||+|+||.||+|.+. +..||+|.+..........+.+|+.++..++|+||++++++|.. ..+
T Consensus 2 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 81 (268)
T cd06624 2 EYEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFK 81 (268)
T ss_pred CcccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEE
Confidence 45667888888889999999999999875 67899999877666666679999999999999999999999854 578
Q ss_pred eeeecCCCCchhhhhhhcCCCCCC--CHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecC-CCCeeeecccce
Q 003703 525 LVYEYLPNGSLQDRLFRKSNVSPL--LWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDS-ELSSKICDFGIC 601 (801)
Q Consensus 525 LV~E~~~~gsL~~~L~~~~~~~~l--~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~-~~~vKL~DFGla 601 (801)
+||||+++++|.+++.... ..+ ++..+..++.||+.||.|||+.+ |+||||||+||+++. ++.++|+|||++
T Consensus 82 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~h~dl~p~nil~~~~~~~~~l~dfg~~ 156 (268)
T cd06624 82 IFMEQVPGGSLSALLRSKW--GPLKDNEQTIIFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLVNTYSGVVKISDFGTS 156 (268)
T ss_pred EEEecCCCCCHHHHHHHhc--ccCCCcHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCeEEEecchhh
Confidence 9999999999999987543 234 77888999999999999999987 999999999999986 679999999998
Q ss_pred eeccCCCCcCCCccccCCCCCCCCCCCccccccCC--CCcchhHHhHHHHHHHHHhCCCCCCChhHHHHH-hhcCccccc
Q 003703 602 RLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGV--LTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRA-VSCGKLSSI 678 (801)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~--~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~-~~~g~~~~~ 678 (801)
........ ......|++.|+|||++.... ++.++|||||||++|+|++|++||......... ...+.
T Consensus 157 ~~~~~~~~------~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~---- 226 (268)
T cd06624 157 KRLAGINP------CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGM---- 226 (268)
T ss_pred eecccCCC------ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhh----
Confidence 76643221 122345899999999986643 789999999999999999999999643221111 11110
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 679 LDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 679 ~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
......++......+.+++.+||+.+|.+||++.+.+
T Consensus 227 -~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll 263 (268)
T cd06624 227 -FKIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLL 263 (268)
T ss_pred -hccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHH
Confidence 0111234445667899999999999999999998544
No 115
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=1.1e-35 Score=315.09 Aligned_cols=250 Identities=34% Similarity=0.455 Sum_probs=201.2
Q ss_pred cCccccceeeecCceEEEEEEEC-CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEecccc-CCcceeeecCCC
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML-GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP-EAWSLVYEYLPN 532 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~-g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~-~~~~LV~E~~~~ 532 (801)
++|...++||+|+||.||+|.+. +..||+|.+..... ....|.+|+.++..++||||+++++++. +..++||||+++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e~~~~ 84 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSK 84 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc-CHHHHHHHHHHHHhCCCCCcceEEEEECCCCcEEEEEcCCC
Confidence 46888889999999999999876 45799999875433 3457899999999999999999999874 457899999999
Q ss_pred CchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCC
Q 003703 533 GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLP 612 (801)
Q Consensus 533 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~ 612 (801)
|+|.+++.... ...+++..+..++.+++.||.|||+.+ |+||||||+||+++.++.+||+|||++..+......
T Consensus 85 ~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~-- 158 (262)
T cd05071 85 GSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT-- 158 (262)
T ss_pred CcHHHHHhhcc-ccCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccCcccEEEcCCCcEEeccCCceeeccccccc--
Confidence 99999996542 245789999999999999999999987 999999999999999999999999999876543211
Q ss_pred CccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChhH--HHHHhhcCccccccCCCCCCCCHH
Q 003703 613 SFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWPTF 689 (801)
Q Consensus 613 ~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~~--~~~~~~~g~~~~~~d~~~~~~~~~ 689 (801)
......++..|+|||+..+..++.++|||||||++|+|+| |..||..... ....+..+.. ...+..
T Consensus 159 ---~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~--------~~~~~~ 227 (262)
T cd05071 159 ---ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR--------MPCPPE 227 (262)
T ss_pred ---cccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCCC--------CCCccc
Confidence 1123456788999999988899999999999999999999 8889864322 2222221110 111234
Q ss_pred HHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHHh
Q 003703 690 VARRLVDLGLQCCELYGRERPDITPSLVKELEQL 723 (801)
Q Consensus 690 ~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~l 723 (801)
.+..+.+|+.+|++.+|.+||++. .+...|+.+
T Consensus 228 ~~~~l~~li~~~l~~~p~~Rp~~~-~~~~~l~~~ 260 (262)
T cd05071 228 CPESLHDLMCQCWRKEPEERPTFE-YLQAFLEDY 260 (262)
T ss_pred cCHHHHHHHHHHccCCcccCCCHH-HHHHHHHHh
Confidence 556889999999999999999998 777777753
No 116
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=7.4e-36 Score=314.95 Aligned_cols=244 Identities=28% Similarity=0.469 Sum_probs=194.6
Q ss_pred CccccceeeecCceEEEEEEEC-CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccccC--CcceeeecCCC
Q 003703 456 NFSESFKVGQGGFGCVYKGEML-GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYLPN 532 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~-g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E~~~~ 532 (801)
+|...+.||+|+||.||+|.+. +..+|+|.+..... ....|.+|+.++..++||||+++++++.+ ..++||||+++
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM-SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMAN 83 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCC
Confidence 4666778999999999999886 56799999865432 34468899999999999999999998854 46899999999
Q ss_pred CchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCC
Q 003703 533 GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLP 612 (801)
Q Consensus 533 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~ 612 (801)
++|.+++.... ..++|..++.|+.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++........
T Consensus 84 ~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~-- 156 (256)
T cd05059 84 GCLLNYLRERK--GKLGTEWLLDMCSDVCEAMEYLESNG---FIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYT-- 156 (256)
T ss_pred CCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHCC---cccccccHhhEEECCCCcEEECCcccceeccccccc--
Confidence 99999987543 36899999999999999999999988 999999999999999999999999999876432211
Q ss_pred CccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChhH--HHHHhhcCccccccCCCCCCCCHH
Q 003703 613 SFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWPTF 689 (801)
Q Consensus 613 ~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~~--~~~~~~~g~~~~~~d~~~~~~~~~ 689 (801)
......++..|+|||++.+..++.++|||||||++|+|+| |+.||..... ....+..+. . ...+..
T Consensus 157 ---~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~-----~---~~~~~~ 225 (256)
T cd05059 157 ---SSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGY-----R---LYRPKL 225 (256)
T ss_pred ---ccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCC-----c---CCCCCC
Confidence 1122334568999999998999999999999999999999 8999964332 222222221 1 112233
Q ss_pred HHHHHHHHHHHhhhhCCCCCCCchHHHHHH
Q 003703 690 VARRLVDLGLQCCELYGRERPDITPSLVKE 719 (801)
Q Consensus 690 ~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~ 719 (801)
.+..+.+|+.+||..+|.+||++. ++...
T Consensus 226 ~~~~~~~li~~cl~~~p~~Rpt~~-~~l~~ 254 (256)
T cd05059 226 APTEVYTIMYSCWHEKPEDRPAFK-KLLSQ 254 (256)
T ss_pred CCHHHHHHHHHHhcCChhhCcCHH-HHHHH
Confidence 566899999999999999999998 45443
No 117
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=9.6e-36 Score=314.08 Aligned_cols=244 Identities=30% Similarity=0.522 Sum_probs=197.1
Q ss_pred eeeecCceEEEEEEEC-----CeEEEEEEeccCCcc-cHHHHHHHHHHHhcCCCCceeeEeccccC-CcceeeecCCCCc
Q 003703 462 KVGQGGFGCVYKGEML-----GRTVAIKMLYSHNMQ-GQLEFQQEVRVLSKLQHPHLVTLLGACPE-AWSLVYEYLPNGS 534 (801)
Q Consensus 462 ~LG~G~fG~Vy~g~~~-----g~~vAiK~l~~~~~~-~~~~f~~E~~il~~l~HpnIV~l~g~~~~-~~~LV~E~~~~gs 534 (801)
+||+|+||.||+|.+. +..||+|.+...... ....+.+|+.++..+.|||||++++++.. ..++||||+++|+
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~~~ 81 (257)
T cd05060 2 ELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKGEPLMLVMELAPLGP 81 (257)
T ss_pred ccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcCCceEEEEEeCCCCc
Confidence 6999999999999764 267999998766543 44568999999999999999999998853 5789999999999
Q ss_pred hhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCCCc
Q 003703 535 LQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSF 614 (801)
Q Consensus 535 L~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~~~ 614 (801)
|.+++.... .+++..++.++.|++.||.|||..+ ++|+||||+|||++.++.+||+|||+++........ .
T Consensus 82 L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~---~ 152 (257)
T cd05060 82 LLKYLKKRR---EIPVSDLKELAHQVAMGMAYLESKH---FVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDY---Y 152 (257)
T ss_pred HHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHhhcC---eeccCcccceEEEcCCCcEEeccccccceeecCCcc---c
Confidence 999997653 6889999999999999999999987 999999999999999999999999999876543321 1
Q ss_pred cccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChhH--HHHHhhcCccccccCCCCCCCCHHHH
Q 003703 615 HRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWPTFVA 691 (801)
Q Consensus 615 ~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~~--~~~~~~~g~~~~~~d~~~~~~~~~~~ 691 (801)
.......++..|+|||.+.+..++.++|||||||++|+|++ |.+||..... +...+..+... ..+...+
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~~~--------~~~~~~~ 224 (257)
T cd05060 153 RATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGERL--------PRPEECP 224 (257)
T ss_pred ccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCcC--------CCCCCCC
Confidence 11222335678999999998999999999999999999998 9999964332 22333332211 1223345
Q ss_pred HHHHHHHHHhhhhCCCCCCCchHHHHHHHHHh
Q 003703 692 RRLVDLGLQCCELYGRERPDITPSLVKELEQL 723 (801)
Q Consensus 692 ~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~l 723 (801)
..+.+++.+||..+|.+||++. .|...|+.+
T Consensus 225 ~~l~~li~~cl~~~p~~Rp~~~-~l~~~l~~~ 255 (257)
T cd05060 225 QEIYSIMLSCWKYRPEDRPTFS-ELESTFRRD 255 (257)
T ss_pred HHHHHHHHHHhcCChhhCcCHH-HHHHHHHhc
Confidence 6889999999999999999999 787777754
No 118
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=4.6e-36 Score=315.39 Aligned_cols=243 Identities=29% Similarity=0.398 Sum_probs=199.4
Q ss_pred CccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccceeeec
Q 003703 456 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEY 529 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~--~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E~ 529 (801)
+|...+.||+|+||.||+|... |..|++|.+..... .....+.+|+.+++.++||||+++++++.+ ..++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 4677788999999999999884 88999999865432 344568899999999999999999999854 47899999
Q ss_pred CCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCC
Q 003703 530 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTL 609 (801)
Q Consensus 530 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~ 609 (801)
+++++|.+++.... ...+++..++.++.+++.||.|||+.+ |+|+||||+||+++.++.++|+|||+++.+.....
T Consensus 81 ~~~~~L~~~l~~~~-~~~~~~~~~~~i~~~l~~al~~lH~~~---i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~ 156 (256)
T cd08529 81 AENGDLHKLLKMQR-GRPLPEDQVWRFFIQILLGLAHLHSKK---ILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTN 156 (256)
T ss_pred CCCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEeCCCCEEEcccccceeccCccc
Confidence 99999999987642 356889999999999999999999987 99999999999999999999999999987654321
Q ss_pred cCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHH--HHHhhcCccccccCCCCCCCC
Q 003703 610 YLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEV--RRAVSCGKLSSILDPLAGDWP 687 (801)
Q Consensus 610 ~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~--~~~~~~g~~~~~~d~~~~~~~ 687 (801)
......|++.|+|||++.+..++.++|||||||++|+|+||+.||...... ...+..+.. ...+
T Consensus 157 ------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--------~~~~ 222 (256)
T cd08529 157 ------FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVF--------PPVS 222 (256)
T ss_pred ------hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC--------CCCc
Confidence 123456889999999999999999999999999999999999999754432 111222221 1222
Q ss_pred HHHHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 688 TFVARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 688 ~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
...+..+.+++.+||+.+|.+||++.+.+
T Consensus 223 ~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll 251 (256)
T cd08529 223 QMYSQQLAQLIDQCLTKDYRQRPDTFQLL 251 (256)
T ss_pred cccCHHHHHHHHHHccCCcccCcCHHHHh
Confidence 24556899999999999999999998543
No 119
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=1e-36 Score=334.35 Aligned_cols=231 Identities=23% Similarity=0.315 Sum_probs=187.8
Q ss_pred eeeecCceEEEEEEEC--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcC-CCCceeeEecccc--CCcceeeecCCCC
Q 003703 462 KVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKL-QHPHLVTLLGACP--EAWSLVYEYLPNG 533 (801)
Q Consensus 462 ~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~---~~~~~f~~E~~il~~l-~HpnIV~l~g~~~--~~~~LV~E~~~~g 533 (801)
.||+|+||.||+|... +..||+|++..... .....+.+|+.++.++ +||||+++++++. ...++||||+++|
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 81 (327)
T cd05617 2 VIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNGG 81 (327)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCCC
Confidence 6999999999999875 78999999976432 2234578899999888 6999999999884 3578999999999
Q ss_pred chhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCCC
Q 003703 534 SLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPS 613 (801)
Q Consensus 534 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~~ 613 (801)
+|..++.... .+++..+..|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 82 ~L~~~~~~~~---~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~----- 150 (327)
T cd05617 82 DLMFHMQRQR---KLPEEHARFYAAEICIALNFLHERG---IIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPG----- 150 (327)
T ss_pred cHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEeCCCCEEEeccccceeccCCC-----
Confidence 9998886543 5899999999999999999999987 9999999999999999999999999987532211
Q ss_pred ccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChh---------HHHHHhhcCccccccCCCCC
Q 003703 614 FHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAG---------EVRRAVSCGKLSSILDPLAG 684 (801)
Q Consensus 614 ~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~---------~~~~~~~~g~~~~~~d~~~~ 684 (801)
.......||+.|+|||++.+..++.++|||||||+||||+||+.||.... .....+..+ ..
T Consensus 151 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~---------~~ 220 (327)
T cd05617 151 -DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEK---------PI 220 (327)
T ss_pred -CceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhC---------CC
Confidence 11234579999999999999999999999999999999999999995211 111211111 11
Q ss_pred CCCHHHHHHHHHHHHHhhhhCCCCCCCch
Q 003703 685 DWPTFVARRLVDLGLQCCELYGRERPDIT 713 (801)
Q Consensus 685 ~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~ 713 (801)
..|...+..+.+++.+||+.||.+||+..
T Consensus 221 ~~p~~~~~~~~~li~~~L~~dP~~R~~~~ 249 (327)
T cd05617 221 RIPRFLSVKASHVLKGFLNKDPKERLGCQ 249 (327)
T ss_pred CCCCCCCHHHHHHHHHHhccCHHHcCCCC
Confidence 23444567789999999999999999863
No 120
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=9.3e-36 Score=320.69 Aligned_cols=257 Identities=27% Similarity=0.392 Sum_probs=199.7
Q ss_pred cCccccceeeecCceEEEEEEECC------------------eEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeE
Q 003703 455 CNFSESFKVGQGGFGCVYKGEMLG------------------RTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTL 515 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~g------------------~~vAiK~l~~~~~-~~~~~f~~E~~il~~l~HpnIV~l 515 (801)
.+|.....||+|+||.||++...+ ..||+|.+..... .....|.+|+.++.+++||||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~ 84 (296)
T cd05051 5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARL 84 (296)
T ss_pred hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence 467778899999999999987642 4689999876543 334578899999999999999999
Q ss_pred eccccC--CcceeeecCCCCchhhhhhhcCC--------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCe
Q 003703 516 LGACPE--AWSLVYEYLPNGSLQDRLFRKSN--------VSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNI 585 (801)
Q Consensus 516 ~g~~~~--~~~LV~E~~~~gsL~~~L~~~~~--------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NI 585 (801)
+++|.. ..++||||+++++|.+++..... ...+++..++.++.|++.||.|||+.+ |+||||||+||
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~---i~H~dlkp~Ni 161 (296)
T cd05051 85 LGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLN---FVHRDLATRNC 161 (296)
T ss_pred EEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcC---ccccccchhce
Confidence 999854 57899999999999999876431 236899999999999999999999987 99999999999
Q ss_pred eecCCCCeeeecccceeeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh--CCCCCCCh
Q 003703 586 LLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT--GRLPVGLA 663 (801)
Q Consensus 586 LLd~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt--G~~Pf~~~ 663 (801)
+++.++.++|+|||+++........ .......+++.|+|||++....++.++|||||||++|||++ |..||...
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~ 237 (296)
T cd05051 162 LVGKNYTIKIADFGMSRNLYSSDYY----RVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHL 237 (296)
T ss_pred eecCCCceEEccccceeecccCcce----eecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCc
Confidence 9999999999999999866433211 12334567889999999988899999999999999999998 77888643
Q ss_pred hH--HHHHhhcCccccccC-CCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHH
Q 003703 664 GE--VRRAVSCGKLSSILD-PLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELE 721 (801)
Q Consensus 664 ~~--~~~~~~~g~~~~~~d-~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~ 721 (801)
.. +....... ....+ ......+...+..+.+|+.+||+.||.+||++. +|...|+
T Consensus 238 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~-el~~~L~ 295 (296)
T cd05051 238 TDQQVIENAGHF--FRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFR-EIHLFLQ 295 (296)
T ss_pred ChHHHHHHHHhc--cccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHH-HHHHHhc
Confidence 22 22211111 00000 001112333456899999999999999999999 5666554
No 121
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=4.3e-36 Score=327.98 Aligned_cols=230 Identities=27% Similarity=0.364 Sum_probs=188.4
Q ss_pred eeeecCceEEEEEEEC--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcC-CCCceeeEecccc--CCcceeeecCCCC
Q 003703 462 KVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKL-QHPHLVTLLGACP--EAWSLVYEYLPNG 533 (801)
Q Consensus 462 ~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~---~~~~~f~~E~~il~~l-~HpnIV~l~g~~~--~~~~LV~E~~~~g 533 (801)
.||+|+||.||+|.+. +..||||++..... .....+..|..++..+ +||||+++++++. +..++||||+++|
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 81 (318)
T cd05570 2 VLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNGG 81 (318)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence 6999999999999885 67999999976432 2334567888999888 7999999999874 3578999999999
Q ss_pred chhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCCC
Q 003703 534 SLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPS 613 (801)
Q Consensus 534 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~~ 613 (801)
+|..++.... .+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 82 ~L~~~~~~~~---~l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~---- 151 (318)
T cd05570 82 DLMFHIQRSG---RFDEPRARFYAAEIVLGLQFLHERG---IIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGV---- 151 (318)
T ss_pred CHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCC---eEccCCCHHHeEECCCCcEEecccCCCeecCcCCC----
Confidence 9998886543 5889999999999999999999987 99999999999999999999999999875322211
Q ss_pred ccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhH--HHHHhhcCccccccCCCCCCCCHHHH
Q 003703 614 FHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWPTFVA 691 (801)
Q Consensus 614 ~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~--~~~~~~~g~~~~~~d~~~~~~~~~~~ 691 (801)
......||+.|+|||++.+..++.++|||||||++|+|+||+.||..... ....+..+. ..++...+
T Consensus 152 --~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~---------~~~~~~~~ 220 (318)
T cd05570 152 --TTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDE---------VRYPRWLS 220 (318)
T ss_pred --cccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCC---------CCCCCcCC
Confidence 12345699999999999999999999999999999999999999974432 222222221 12333456
Q ss_pred HHHHHHHHHhhhhCCCCCCCc
Q 003703 692 RRLVDLGLQCCELYGRERPDI 712 (801)
Q Consensus 692 ~~l~~Li~~Cl~~dP~~RPt~ 712 (801)
..+.+|+.+||+.||.+||++
T Consensus 221 ~~~~~li~~~l~~dP~~R~s~ 241 (318)
T cd05570 221 KEAKSILKSFLTKNPEKRLGC 241 (318)
T ss_pred HHHHHHHHHHccCCHHHcCCC
Confidence 788999999999999999999
No 122
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=9.7e-36 Score=314.60 Aligned_cols=250 Identities=32% Similarity=0.465 Sum_probs=202.1
Q ss_pred hcCccccceeeecCceEEEEEEEC-CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEecccc-CCcceeeecCC
Q 003703 454 TCNFSESFKVGQGGFGCVYKGEML-GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP-EAWSLVYEYLP 531 (801)
Q Consensus 454 t~~f~~~~~LG~G~fG~Vy~g~~~-g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~-~~~~LV~E~~~ 531 (801)
.++|...++||+|+||.||+|... +..||+|.+..... ....|.+|+.++++++||||+++++++. +..+++|||++
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~ 83 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVVTQEPIYIITEYME 83 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEEccCCcEEEEEcCC
Confidence 356778889999999999999875 78999999875543 3457889999999999999999999874 45789999999
Q ss_pred CCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcC
Q 003703 532 NGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYL 611 (801)
Q Consensus 532 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~ 611 (801)
+|+|.+++.... ...+++..++.++.+++.||.|||+.+ ++||||||+||+++.++.++|+|||++........
T Consensus 84 ~~~L~~~~~~~~-~~~~~~~~~~~i~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~-- 157 (260)
T cd05067 84 NGSLVDFLKTPE-GIKLTINKLIDMAAQIAEGMAFIERKN---YIHRDLRAANILVSETLCCKIADFGLARLIEDNEY-- 157 (260)
T ss_pred CCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHHhEEEcCCCCEEEccCcceeecCCCCc--
Confidence 999999886543 246899999999999999999999987 99999999999999999999999999987653221
Q ss_pred CCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChhH--HHHHhhcCccccccCCCCCCCCH
Q 003703 612 PSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWPT 688 (801)
Q Consensus 612 ~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~~--~~~~~~~g~~~~~~d~~~~~~~~ 688 (801)
.......++..|+|||++....++.++|||||||++|||++ |++||..... ....+..+... ..+.
T Consensus 158 ---~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~--------~~~~ 226 (260)
T cd05067 158 ---TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYRM--------PRPD 226 (260)
T ss_pred ---ccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCCC--------CCCC
Confidence 11223456788999999998899999999999999999999 9999964332 22222222111 1122
Q ss_pred HHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHH
Q 003703 689 FVARRLVDLGLQCCELYGRERPDITPSLVKELEQ 722 (801)
Q Consensus 689 ~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~ 722 (801)
..+..+.+++.+|++.+|.+||++. .+...|+.
T Consensus 227 ~~~~~~~~li~~~l~~~p~~Rp~~~-~l~~~l~~ 259 (260)
T cd05067 227 NCPEELYELMRLCWKEKPEERPTFE-YLRSVLED 259 (260)
T ss_pred CCCHHHHHHHHHHccCChhhCCCHH-HHHHHhhc
Confidence 2445799999999999999999998 67777653
No 123
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=3.4e-36 Score=330.55 Aligned_cols=238 Identities=29% Similarity=0.392 Sum_probs=189.7
Q ss_pred CccccceeeecCceEEEEEEE-----CCeEEEEEEeccCCc----ccHHHHHHHHHHHhcC-CCCceeeEeccccC--Cc
Q 003703 456 NFSESFKVGQGGFGCVYKGEM-----LGRTVAIKMLYSHNM----QGQLEFQQEVRVLSKL-QHPHLVTLLGACPE--AW 523 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~-----~g~~vAiK~l~~~~~----~~~~~f~~E~~il~~l-~HpnIV~l~g~~~~--~~ 523 (801)
+|...+.||+|+||.||+++. .|..||+|++..... .....+..|+.++..+ +||||+++++++.. ..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 477788999999999999876 378999999865322 2234578899999999 59999999988854 47
Q ss_pred ceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceee
Q 003703 524 SLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRL 603 (801)
Q Consensus 524 ~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~ 603 (801)
++||||+++|+|.+++.... .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 81 ~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nili~~~~~~kl~DfG~~~~ 154 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQRD---NFSEDEVRFYSGEIILALEHLHKLG---IVYRDIKLENILLDSEGHVVLTDFGLSKE 154 (332)
T ss_pred EEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHeEECCCCCEEEeeCcCCcc
Confidence 89999999999999987643 5788999999999999999999988 99999999999999999999999999986
Q ss_pred ccCCCCcCCCccccCCCCCCCCCCCccccccC-CCCcchhHHhHHHHHHHHHhCCCCCCChh------HHHHHhhcCccc
Q 003703 604 VTEDTLYLPSFHRSTAPKGSFPYADPEYHRTG-VLTPKSDSYSFGLIILQLLTGRLPVGLAG------EVRRAVSCGKLS 676 (801)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~-~~s~ksDVwSlGvvL~ELltG~~Pf~~~~------~~~~~~~~g~~~ 676 (801)
+..... .......||+.|+|||++.+. .++.++|||||||++|||+||+.||.... .+...+...
T Consensus 155 ~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~--- 226 (332)
T cd05614 155 FLSEEK-----ERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKC--- 226 (332)
T ss_pred ccccCC-----CccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcC---
Confidence 543221 122345799999999998765 47899999999999999999999996321 111111111
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCch
Q 003703 677 SILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDIT 713 (801)
Q Consensus 677 ~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~ 713 (801)
...++...+..+.+++.+||+.||.+||+..
T Consensus 227 ------~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~ 257 (332)
T cd05614 227 ------DPPFPSFIGPEAQDLLHKLLRKDPKKRLGAG 257 (332)
T ss_pred ------CCCCCCCCCHHHHHHHHHHcCCCHHHcCCCC
Confidence 1123334566789999999999999999643
No 124
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=5.6e-36 Score=317.50 Aligned_cols=247 Identities=25% Similarity=0.314 Sum_probs=194.7
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEecccc--CCcceeeecC
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYL 530 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~LV~E~~ 530 (801)
.+|...+.||+|+||.||+|... |..||+|++..........+.+|+.++.+++||||+++++++. +..++||||+
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~ 88 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYC 88 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCC
Confidence 46888889999999999999874 7899999997655445556889999999999999999999884 4578999999
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCc
Q 003703 531 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLY 610 (801)
Q Consensus 531 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~ 610 (801)
++|+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++..+....
T Consensus 89 ~~~~L~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~-- 160 (267)
T cd06646 89 GGGSLQDIYHVT---GPLSELQIAYVCRETLQGLAYLHSKG---KMHRDIKGANILLTDNGDVKLADFGVAAKITATI-- 160 (267)
T ss_pred CCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCCEEECcCccceeecccc--
Confidence 999999988654 35788999999999999999999987 9999999999999999999999999998764322
Q ss_pred CCCccccCCCCCCCCCCCccccc---cCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhhcCccccccCCCCCCCC
Q 003703 611 LPSFHRSTAPKGSFPYADPEYHR---TGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWP 687 (801)
Q Consensus 611 ~~~~~~~~~~~Gt~~Y~APE~~~---~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~g~~~~~~d~~~~~~~ 687 (801)
.......|++.|+|||++. ...++.++|||||||++|||++|+.||.............. .. +.+.....+
T Consensus 161 ----~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~-~~-~~~~~~~~~ 234 (267)
T cd06646 161 ----AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK-SN-FQPPKLKDK 234 (267)
T ss_pred ----cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeec-CC-CCCCCCccc
Confidence 1123456899999999874 45578899999999999999999999853332211111000 00 111111111
Q ss_pred HHHHHHHHHHHHHhhhhCCCCCCCchHH
Q 003703 688 TFVARRLVDLGLQCCELYGRERPDITPS 715 (801)
Q Consensus 688 ~~~~~~l~~Li~~Cl~~dP~~RPt~~e~ 715 (801)
...+..+.+++.+||+.+|.+||++.+.
T Consensus 235 ~~~~~~~~~li~~~l~~~P~~Rp~~~~i 262 (267)
T cd06646 235 TKWSSTFHNFVKISLTKNPKKRPTAERL 262 (267)
T ss_pred cccCHHHHHHHHHHhhCChhhCcCHHHH
Confidence 2345688999999999999999999843
No 125
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=5.1e-36 Score=336.59 Aligned_cols=244 Identities=19% Similarity=0.238 Sum_probs=188.6
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEecccc--CCcceeeecC
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYL 530 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~LV~E~~ 530 (801)
.+|...+.||+|+||.||++... ++.||||.... ..+.+|+.+|++++|||||+++++|. ...++|+|++
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~ 165 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRY 165 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecC
Confidence 57899999999999999999885 78999997532 34678999999999999999999884 4578999998
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCc
Q 003703 531 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLY 610 (801)
Q Consensus 531 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~ 610 (801)
+++|..++... ..+++..++.|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 166 -~~~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~ylH~~~---IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~- 237 (391)
T PHA03212 166 -KTDLYCYLAAK---RNIAICDILAIERSVLRAIQYLHENR---IIHRDIKAENIFINHPGDVCLGDFGAACFPVDINA- 237 (391)
T ss_pred -CCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHhEEEcCCCCEEEEeCCcccccccccc-
Confidence 47888877654 35789999999999999999999987 99999999999999999999999999975432211
Q ss_pred CCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChh----------HHHHHhh-cCccc---
Q 003703 611 LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAG----------EVRRAVS-CGKLS--- 676 (801)
Q Consensus 611 ~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~----------~~~~~~~-~g~~~--- 676 (801)
.......||+.|+|||++.+..++.++|||||||++|||+||+.||.... .+...+. .|...
T Consensus 238 ----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~ 313 (391)
T PHA03212 238 ----NKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEF 313 (391)
T ss_pred ----cccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhc
Confidence 12235679999999999999999999999999999999999998863211 0111110 01000
Q ss_pred ---------cc---------cCCC-CCCCC--HHHHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 677 ---------SI---------LDPL-AGDWP--TFVARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 677 ---------~~---------~d~~-~~~~~--~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
.. ..+. ...|. ...+..+.+|+.+||+.||.+|||+.+.+
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL 374 (391)
T PHA03212 314 PIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALL 374 (391)
T ss_pred CcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHh
Confidence 00 0000 00111 12456789999999999999999998544
No 126
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=1.2e-36 Score=340.05 Aligned_cols=248 Identities=22% Similarity=0.285 Sum_probs=189.7
Q ss_pred CccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccceeee
Q 003703 456 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYE 528 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~---~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E 528 (801)
+|...+.||+|+||.||+++.. |+.||||++..... .....+.+|+.+|.+++||||+++++.+.+ ..++|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E 81 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEe
Confidence 6888899999999999999875 78999999865322 223457899999999999999999998843 5789999
Q ss_pred cCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCC
Q 003703 529 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDT 608 (801)
Q Consensus 529 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~ 608 (801)
|+++|+|.+++.... .++...+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+|..+....
T Consensus 82 ~~~~g~L~~~i~~~~---~~~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~ 155 (376)
T cd05598 82 YIPGGDMMSLLIRLG---IFEEDLARFYIAELTCAIESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 155 (376)
T ss_pred CCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHEEECCCCCEEEEeCCCCccccccc
Confidence 999999999986643 5778888999999999999999988 9999999999999999999999999985432100
Q ss_pred Cc-------------------------------------CCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHH
Q 003703 609 LY-------------------------------------LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIIL 651 (801)
Q Consensus 609 ~~-------------------------------------~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ 651 (801)
.. ...........||+.|+|||++.+..++.++|||||||++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvily 235 (376)
T cd05598 156 DSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 235 (376)
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceee
Confidence 00 00000112457999999999999999999999999999999
Q ss_pred HHHhCCCCCCChhHHHH--HhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCC---CchHH
Q 003703 652 QLLTGRLPVGLAGEVRR--AVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERP---DITPS 715 (801)
Q Consensus 652 ELltG~~Pf~~~~~~~~--~~~~g~~~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RP---t~~e~ 715 (801)
||++|+.||........ .+..... ....+. ....+..+.+++.+|+ .+|.+|| ++.+.
T Consensus 236 ell~G~~Pf~~~~~~~~~~~i~~~~~-~~~~~~----~~~~s~~~~~li~~l~-~~p~~R~~~~t~~el 298 (376)
T cd05598 236 EMLVGQPPFLADTPAETQLKVINWET-TLHIPS----QAKLSREASDLILRLC-CGAEDRLGKNGADEI 298 (376)
T ss_pred ehhhCCCCCCCCCHHHHHHHHhccCc-cccCCC----CCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHH
Confidence 99999999975443221 1111110 111111 1124456777888876 4999999 55543
No 127
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=6.1e-36 Score=321.37 Aligned_cols=242 Identities=24% Similarity=0.316 Sum_probs=193.8
Q ss_pred ccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcc---cHHHHHHHHHHHhcCCCCceeeEecccc--CCcceeeec
Q 003703 457 FSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ---GQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEY 529 (801)
Q Consensus 457 f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~---~~~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~LV~E~ 529 (801)
|...+.||+|+||.||+|... ++.||+|.+...... ....+.+|+.+|..++|+||+++++++. +..++||||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 566778999999999999885 789999998654332 2335778999999999999999998874 347899999
Q ss_pred CCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCC
Q 003703 530 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTL 609 (801)
Q Consensus 530 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~ 609 (801)
+++|+|.+++..... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 82 ~~~~~L~~~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~---iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~- 156 (285)
T cd05632 82 MNGGDLKFHIYNMGN-PGFEEERALFYAAEILCGLEDLHREN---TVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE- 156 (285)
T ss_pred ccCccHHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCCHHHEEECCCCCEEEecCCcceecCCCC-
Confidence 999999988865432 46899999999999999999999987 9999999999999999999999999997654322
Q ss_pred cCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHH--HHhhcCccccccCCCCCCCC
Q 003703 610 YLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVR--RAVSCGKLSSILDPLAGDWP 687 (801)
Q Consensus 610 ~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~--~~~~~g~~~~~~d~~~~~~~ 687 (801)
......|++.|+|||++.+..++.++|||||||++|+|++|..||....... ..+.. ..... ...++
T Consensus 157 ------~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~-~~~~~----~~~~~ 225 (285)
T cd05632 157 ------SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDR-RVLET----EEVYS 225 (285)
T ss_pred ------cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH-hhhcc----ccccC
Confidence 1234579999999999998999999999999999999999999997433211 11111 11110 11233
Q ss_pred HHHHHHHHHHHHHhhhhCCCCCCCchH
Q 003703 688 TFVARRLVDLGLQCCELYGRERPDITP 714 (801)
Q Consensus 688 ~~~~~~l~~Li~~Cl~~dP~~RPt~~e 714 (801)
...+..+.+|+..||+.||.+||++.+
T Consensus 226 ~~~~~~~~~li~~~l~~~P~~R~~~~~ 252 (285)
T cd05632 226 AKFSEEAKSICKMLLTKDPKQRLGCQE 252 (285)
T ss_pred ccCCHHHHHHHHHHccCCHhHcCCCcc
Confidence 345567899999999999999999653
No 128
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=2.8e-36 Score=322.85 Aligned_cols=249 Identities=28% Similarity=0.437 Sum_probs=196.9
Q ss_pred ccccceeeecCceEEEEEEEC-------CeEEEEEEeccCCccc-HHHHHHHHHHHhcCCCCceeeEeccccC--Cccee
Q 003703 457 FSESFKVGQGGFGCVYKGEML-------GRTVAIKMLYSHNMQG-QLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLV 526 (801)
Q Consensus 457 f~~~~~LG~G~fG~Vy~g~~~-------g~~vAiK~l~~~~~~~-~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV 526 (801)
|...+.||+|+||.||+|... +..||||++....... ...|.+|+.++..++||||+++++++.+ ..+++
T Consensus 7 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~ 86 (283)
T cd05091 7 VRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSMI 86 (283)
T ss_pred HHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEEE
Confidence 455567999999999999864 4679999997554322 3468899999999999999999999853 57889
Q ss_pred eecCCCCchhhhhhhcC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCe
Q 003703 527 YEYLPNGSLQDRLFRKS-------------NVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSS 593 (801)
Q Consensus 527 ~E~~~~gsL~~~L~~~~-------------~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~v 593 (801)
+||+++++|.+++.... ....+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+
T Consensus 87 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~g---i~H~dlkp~Nil~~~~~~~ 163 (283)
T cd05091 87 FSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHH---VVHKDLATRNVLVFDKLNV 163 (283)
T ss_pred EEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcC---ccccccchhheEecCCCce
Confidence 99999999999885321 1235888999999999999999999987 9999999999999999999
Q ss_pred eeecccceeeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChh--HHHHHh
Q 003703 594 KICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAG--EVRRAV 670 (801)
Q Consensus 594 KL~DFGla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~--~~~~~~ 670 (801)
||+|||+++........ .......+++.|+|||++.++.++.++|||||||++|||+| |..||.... .....+
T Consensus 164 kl~Dfg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i 239 (283)
T cd05091 164 KISDLGLFREVYAADYY----KLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMI 239 (283)
T ss_pred Eecccccccccccchhe----eeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 99999998866433211 11234456789999999988899999999999999999998 888886432 233333
Q ss_pred hcCccccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHH
Q 003703 671 SCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELE 721 (801)
Q Consensus 671 ~~g~~~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~ 721 (801)
..+.. ...+...+..+.+|+..||+.+|.+||++. ++...|+
T Consensus 240 ~~~~~--------~~~~~~~~~~~~~li~~cl~~~p~~RP~~~-~i~~~l~ 281 (283)
T cd05091 240 RNRQV--------LPCPDDCPAWVYTLMLECWNEFPSRRPRFK-DIHSRLR 281 (283)
T ss_pred HcCCc--------CCCCCCCCHHHHHHHHHHhCCCcccCCCHH-HHHHHhh
Confidence 33322 122334556789999999999999999998 6666665
No 129
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=2.1e-36 Score=338.90 Aligned_cols=245 Identities=22% Similarity=0.283 Sum_probs=187.8
Q ss_pred CccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccceeee
Q 003703 456 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYE 528 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~---~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E 528 (801)
+|...++||+|+||.||+|+.. +..||+|++..... .....+.+|+.++.+++|||||+++++|.+ ..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 5788899999999999999875 78999999865432 223468899999999999999999999854 4789999
Q ss_pred cCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCC
Q 003703 529 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDT 608 (801)
Q Consensus 529 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~ 608 (801)
|+++|+|.+++.+.. .++...+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++..+....
T Consensus 82 ~~~gg~L~~~l~~~~---~~~e~~~~~~~~qi~~al~~lH~~~---ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~ 155 (382)
T cd05625 82 YIPGGDMMSLLIRMG---IFPEDLARFYIAELTCAVESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 155 (382)
T ss_pred CCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEEeECCCCccccccc
Confidence 999999999986643 5788889999999999999999988 9999999999999999999999999986432100
Q ss_pred Cc-----------------------------------------CCCccccCCCCCCCCCCCccccccCCCCcchhHHhHH
Q 003703 609 LY-----------------------------------------LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFG 647 (801)
Q Consensus 609 ~~-----------------------------------------~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlG 647 (801)
.. ..........+||+.|+|||++.+..++.++||||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG 235 (382)
T cd05625 156 DSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVG 235 (382)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEech
Confidence 00 0000011235799999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCChhHHHHHhhcCccc-cccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCC
Q 003703 648 LIILQLLTGRLPVGLAGEVRRAVSCGKLS-SILDPLAGDWPTFVARRLVDLGLQCCELYGRERPD 711 (801)
Q Consensus 648 vvL~ELltG~~Pf~~~~~~~~~~~~g~~~-~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt 711 (801)
|+||||++|++||................ ....+ .....+..+.+++.+|+ .+|.+|++
T Consensus 236 vil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p----~~~~~s~~~~~li~~l~-~~p~~R~~ 295 (382)
T cd05625 236 VILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIP----PQAKLSPEASDLIIKLC-RGPEDRLG 295 (382)
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCC----CcccCCHHHHHHHHHHc-cCHhHcCC
Confidence 99999999999997544322211111100 00001 11224556777777776 49999998
No 130
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=2e-36 Score=331.49 Aligned_cols=239 Identities=27% Similarity=0.331 Sum_probs=189.1
Q ss_pred eeeecCceEEEEEEEC--CeEEEEEEeccCCc---ccHHHHHHHHH-HHhcCCCCceeeEecccc--CCcceeeecCCCC
Q 003703 462 KVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVR-VLSKLQHPHLVTLLGACP--EAWSLVYEYLPNG 533 (801)
Q Consensus 462 ~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~---~~~~~f~~E~~-il~~l~HpnIV~l~g~~~--~~~~LV~E~~~~g 533 (801)
.||+|+||.||+++.. |..||+|++..... .....+..|.. ++..++||||+++++++. +..++||||+++|
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~~ 81 (325)
T cd05604 2 VIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGG 81 (325)
T ss_pred ceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCCC
Confidence 5999999999999874 88999999865422 22334556655 467789999999998884 4578999999999
Q ss_pred chhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCCC
Q 003703 534 SLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPS 613 (801)
Q Consensus 534 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~~ 613 (801)
+|..++... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 82 ~L~~~l~~~---~~~~~~~~~~~~~qi~~al~~lH~~g---ivH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~----- 150 (325)
T cd05604 82 ELFFHLQRE---RSFPEPRARFYAAEIASALGYLHSIN---IVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQS----- 150 (325)
T ss_pred CHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEEeecCCcccCCCCC-----
Confidence 999888654 35889999999999999999999988 9999999999999999999999999987542211
Q ss_pred ccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhH--HHHHhhcCccccccCCCCCCCCHHHH
Q 003703 614 FHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWPTFVA 691 (801)
Q Consensus 614 ~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~--~~~~~~~g~~~~~~d~~~~~~~~~~~ 691 (801)
.......||+.|+|||++.+..++.++|||||||++|||++|++||...+. +...+..+.+ ..+...+
T Consensus 151 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~---------~~~~~~~ 220 (325)
T cd05604 151 -DTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPL---------VLRPGAS 220 (325)
T ss_pred -CCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCCc---------cCCCCCC
Confidence 122455799999999999999999999999999999999999999974432 2222222211 1122245
Q ss_pred HHHHHHHHHhhhhCCCCCCCchHHHHHHHH
Q 003703 692 RRLVDLGLQCCELYGRERPDITPSLVKELE 721 (801)
Q Consensus 692 ~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~ 721 (801)
..+.+++.+|++.+|.+||++.+.+.+.++
T Consensus 221 ~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~ 250 (325)
T cd05604 221 LTAWSILEELLEKDRQRRLGAKEDFLEIQE 250 (325)
T ss_pred HHHHHHHHHHhccCHHhcCCCCCCHHHHhc
Confidence 678899999999999999999754444443
No 131
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=7.7e-36 Score=319.44 Aligned_cols=251 Identities=27% Similarity=0.431 Sum_probs=199.4
Q ss_pred cCccccceeeecCceEEEEEEE-------CCeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccce
Q 003703 455 CNFSESFKVGQGGFGCVYKGEM-------LGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSL 525 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~-------~g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~L 525 (801)
.+|....+||+|+||.||++.. .+..+|+|.+..........|.+|+.++..++||||+++++++.+ ..++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM 84 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence 3566677899999999999964 256899999876655556679999999999999999999998853 4789
Q ss_pred eeecCCCCchhhhhhhcCC------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCe
Q 003703 526 VYEYLPNGSLQDRLFRKSN------------VSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSS 593 (801)
Q Consensus 526 V~E~~~~gsL~~~L~~~~~------------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~v 593 (801)
+|||+++|+|.+++..... ...+++..++.++.|++.||.|||+.+ |+||||||+|||++.++.+
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~nil~~~~~~~ 161 (280)
T cd05092 85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLH---FVHRDLATRNCLVGQGLVV 161 (280)
T ss_pred EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCC---eecccccHhhEEEcCCCCE
Confidence 9999999999999875431 135889999999999999999999987 9999999999999999999
Q ss_pred eeecccceeeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChhH--HHHHh
Q 003703 594 KICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAV 670 (801)
Q Consensus 594 KL~DFGla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~~--~~~~~ 670 (801)
||+|||+++........ .......+++.|+|||++.+..++.++|||||||++|||++ |.+||..... ....+
T Consensus 162 kL~dfg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~ 237 (280)
T cd05092 162 KIGDFGMSRDIYSTDYY----RVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECI 237 (280)
T ss_pred EECCCCceeEcCCCcee----ecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHH
Confidence 99999999866432211 11233446788999999999999999999999999999998 9999854332 22222
Q ss_pred hcCccccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHH
Q 003703 671 SCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELE 721 (801)
Q Consensus 671 ~~g~~~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~ 721 (801)
..+... ..+...+..+.+|+.+||+.||.+||++. +|.+.|+
T Consensus 238 ~~~~~~--------~~~~~~~~~~~~li~~cl~~~P~~Rp~~~-~l~~~l~ 279 (280)
T cd05092 238 TQGREL--------ERPRTCPPEVYAIMQGCWQREPQQRMVIK-DIHSRLQ 279 (280)
T ss_pred HcCccC--------CCCCCCCHHHHHHHHHHccCChhhCCCHH-HHHHHHh
Confidence 222111 11223446789999999999999999998 6666654
No 132
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=3.1e-36 Score=329.41 Aligned_cols=238 Identities=27% Similarity=0.347 Sum_probs=188.0
Q ss_pred eeeecCceEEEEEEEC--CeEEEEEEeccCCc---ccHHHHHHHHH-HHhcCCCCceeeEecccc--CCcceeeecCCCC
Q 003703 462 KVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVR-VLSKLQHPHLVTLLGACP--EAWSLVYEYLPNG 533 (801)
Q Consensus 462 ~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~---~~~~~f~~E~~-il~~l~HpnIV~l~g~~~--~~~~LV~E~~~~g 533 (801)
.||+|+||.||+|+.. |..||+|++..... .....+..|.. ++..++||||+++++++. +..++||||+++|
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 81 (321)
T cd05603 2 VIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNGG 81 (321)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence 6999999999999885 78999999865432 22334555554 578899999999999884 3578999999999
Q ss_pred chhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCCC
Q 003703 534 SLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPS 613 (801)
Q Consensus 534 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~~ 613 (801)
+|...+... ..++...+..|+.||+.||.|||+.+ |+||||||+||||+.++.+||+|||+++......
T Consensus 82 ~L~~~l~~~---~~~~~~~~~~~~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~----- 150 (321)
T cd05603 82 ELFFHLQRE---RCFLEPRARFYAAEVASAIGYLHSLN---IIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPE----- 150 (321)
T ss_pred CHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEccCCCCccCCCCC-----
Confidence 999888654 35778888999999999999999987 9999999999999999999999999987532221
Q ss_pred ccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhH--HHHHhhcCccccccCCCCCCCCHHHH
Q 003703 614 FHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWPTFVA 691 (801)
Q Consensus 614 ~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~--~~~~~~~g~~~~~~d~~~~~~~~~~~ 691 (801)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||...+. ....+..+. ...+...+
T Consensus 151 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~---------~~~~~~~~ 220 (321)
T cd05603 151 -ETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKP---------LQLPGGKT 220 (321)
T ss_pred -CccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcCC---------CCCCCCCC
Confidence 122345799999999999999999999999999999999999999965432 222222211 12333455
Q ss_pred HHHHHHHHHhhhhCCCCCCCchHHHHHHH
Q 003703 692 RRLVDLGLQCCELYGRERPDITPSLVKEL 720 (801)
Q Consensus 692 ~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L 720 (801)
..+.+++.+||+.+|.+||+....+.+.+
T Consensus 221 ~~~~~li~~~l~~~p~~R~~~~~~~~~~~ 249 (321)
T cd05603 221 VAACDLLVGLLHKDQRRRLGAKADFLEIK 249 (321)
T ss_pred HHHHHHHHHHccCCHhhcCCCCCCHHHHh
Confidence 67899999999999999998764444443
No 133
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=2e-36 Score=345.01 Aligned_cols=253 Identities=23% Similarity=0.317 Sum_probs=190.7
Q ss_pred HhcCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccccC---------
Q 003703 453 ATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--------- 521 (801)
Q Consensus 453 at~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--------- 521 (801)
.+.+|...+.||+|+||.||+|... +..||||++.... ....+|+.+|..++|||||++++++..
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~ 139 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN 139 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence 3467999999999999999999874 7899999885432 234579999999999999999886521
Q ss_pred -CcceeeecCCCCchhhhhhhc-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCC-Ceeeecc
Q 003703 522 -AWSLVYEYLPNGSLQDRLFRK-SNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSEL-SSKICDF 598 (801)
Q Consensus 522 -~~~LV~E~~~~gsL~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~-~vKL~DF 598 (801)
..++||||+++ +|.+.+... .....+++..+..++.||+.||.|||+.+ |+||||||+||||+.++ .+||+||
T Consensus 140 ~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~---IiHrDLKp~NILl~~~~~~vkL~DF 215 (440)
T PTZ00036 140 IFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKF---ICHRDLKPQNLLIDPNTHTLKLCDF 215 (440)
T ss_pred eEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCcCHHHEEEcCCCCceeeecc
Confidence 24589999975 676665432 22356889999999999999999999988 99999999999999665 6999999
Q ss_pred cceeeccCCCCcCCCccccCCCCCCCCCCCcccccc-CCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHH---Hhh-cC
Q 003703 599 GICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRR---AVS-CG 673 (801)
Q Consensus 599 Gla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~-~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~---~~~-~g 673 (801)
|+|+.+.... ......||+.|+|||++.+ ..++.++|||||||+||||+||++||........ .+. .|
T Consensus 216 Gla~~~~~~~-------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~ 288 (440)
T PTZ00036 216 GSAKNLLAGQ-------RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLG 288 (440)
T ss_pred ccchhccCCC-------CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC
Confidence 9998764322 1234578999999998765 4699999999999999999999999975432211 110 01
Q ss_pred c------------cccccCCC------CCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHH
Q 003703 674 K------------LSSILDPL------AGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKEL 720 (801)
Q Consensus 674 ~------------~~~~~d~~------~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L 720 (801)
. +..+--+. ...+|...+..+.+|+.+||..||.+|||+.+.+.+.+
T Consensus 289 ~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~ 353 (440)
T PTZ00036 289 TPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPF 353 (440)
T ss_pred CCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChh
Confidence 0 00000000 01122234568999999999999999999997666554
No 134
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=1.5e-35 Score=313.93 Aligned_cols=253 Identities=22% Similarity=0.331 Sum_probs=202.4
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEecccc--CCcceee
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVY 527 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~---~~~~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~LV~ 527 (801)
++|...+.||+|+||.||+|+.. +..||||.+..... .....|.+|+.+++.++||||+++++++. ...++||
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 46888889999999999999874 89999998865332 23346889999999999999999999874 4578999
Q ss_pred ecCCCCchhhhhhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccC
Q 003703 528 EYLPNGSLQDRLFRKS-NVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTE 606 (801)
Q Consensus 528 E~~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~ 606 (801)
||+++|+|.+++.... ....++...+..++.+++.||.|||+.+ ++|+||||+|||++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 9999999998886432 2245788999999999999999999987 99999999999999999999999999987654
Q ss_pred CCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChh----HHHHHhhcCccccccCCC
Q 003703 607 DTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAG----EVRRAVSCGKLSSILDPL 682 (801)
Q Consensus 607 ~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~----~~~~~~~~g~~~~~~d~~ 682 (801)
... ......|++.|+|||++.+..++.++||||||+++|||++|+.||.... .....+..+...
T Consensus 159 ~~~------~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~------ 226 (267)
T cd08228 159 KTT------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYP------ 226 (267)
T ss_pred hhH------HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCCC------
Confidence 321 1234568899999999988889999999999999999999999985322 111222111111
Q ss_pred CCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHHhh
Q 003703 683 AGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLH 724 (801)
Q Consensus 683 ~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~l~ 724 (801)
...+...+..+.+++.+||..+|.+||++. ++.+.|+.+.
T Consensus 227 -~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~-~vl~~~~~~~ 266 (267)
T cd08228 227 -PLPTEHYSEKLRELVSMCIYPDPDQRPDIG-YVHQIAKQMH 266 (267)
T ss_pred -CCChhhcCHHHHHHHHHHCCCCcccCcCHH-HHHHHHHHhc
Confidence 111223556799999999999999999999 7888887653
No 135
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=1.4e-35 Score=312.44 Aligned_cols=245 Identities=28% Similarity=0.472 Sum_probs=201.7
Q ss_pred cCccccceeeecCceEEEEEEECCeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEecccc--CCcceeeecCCC
Q 003703 455 CNFSESFKVGQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYLPN 532 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~LV~E~~~~ 532 (801)
++|.....||.|+||.||+|...|+.||+|.+..... ....+.+|+.++..++|+||+++++++. +..++||||+++
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~ 84 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDYRGQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAK 84 (256)
T ss_pred hhccceeeeecCCCceEEEEEecCcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecCC
Confidence 4677778999999999999999999999999976544 4567889999999999999999999884 457899999999
Q ss_pred CchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCC
Q 003703 533 GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLP 612 (801)
Q Consensus 533 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~ 612 (801)
++|.+++..... ..+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||+++......
T Consensus 85 ~~L~~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~---- 156 (256)
T cd05039 85 GSLVDYLRSRGR-AVITLAQQLGFALDVCEGMEYLEEKN---FVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ---- 156 (256)
T ss_pred CcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhCC---ccchhcccceEEEeCCCCEEEccccccccccccc----
Confidence 999999865542 36899999999999999999999988 9999999999999999999999999998763221
Q ss_pred CccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChhH--HHHHhhcCccccccCCCCCCCCHH
Q 003703 613 SFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWPTF 689 (801)
Q Consensus 613 ~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~~--~~~~~~~g~~~~~~d~~~~~~~~~ 689 (801)
....++..|+|||++..+.++.++||||||+++|+|++ |..||..... +...+..+... ..+..
T Consensus 157 -----~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~--------~~~~~ 223 (256)
T cd05039 157 -----DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGYRM--------EAPEG 223 (256)
T ss_pred -----ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCCCC--------CCccC
Confidence 12335678999999988899999999999999999997 9999864432 22222222111 12223
Q ss_pred HHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHH
Q 003703 690 VARRLVDLGLQCCELYGRERPDITPSLVKELEQ 722 (801)
Q Consensus 690 ~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~ 722 (801)
.+..+.+++.+||..+|.+||++. ++...|+.
T Consensus 224 ~~~~~~~li~~~l~~~p~~Rp~~~-~l~~~l~~ 255 (256)
T cd05039 224 CPPEVYKVMKDCWELDPAKRPTFK-QLREQLAL 255 (256)
T ss_pred CCHHHHHHHHHHhccChhhCcCHH-HHHHHHhc
Confidence 456889999999999999999998 67777653
No 136
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=1.8e-35 Score=312.70 Aligned_cols=249 Identities=32% Similarity=0.441 Sum_probs=199.7
Q ss_pred cCccccceeeecCceEEEEEEEC-CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccccC-CcceeeecCCC
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML-GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACPE-AWSLVYEYLPN 532 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~-g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~-~~~LV~E~~~~ 532 (801)
.+|.....||+|+||.||+|.+. +..||+|.+..... ....|.+|+.++.+++|||++++++++.. ..++||||+++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~ 84 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTM-MPEAFLQEAQIMKKLRHDKLVPLYAVVSEEPIYIVTEFMGK 84 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCCc-cHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCcEEEEEcCCC
Confidence 35677788999999999999886 45799998865432 34568899999999999999999998854 46899999999
Q ss_pred CchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCC
Q 003703 533 GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLP 612 (801)
Q Consensus 533 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~ 612 (801)
|+|.+++.... ...++|..+..++.+++.||.|||+.+ |+|+||||+||+++.++.++|+|||+++........
T Consensus 85 ~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~-- 158 (260)
T cd05069 85 GSLLDFLKEGD-GKYLKLPQLVDMAAQIADGMAYIERMN---YIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYT-- 158 (260)
T ss_pred CCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccCcceEEEcCCCeEEECCCccceEccCCccc--
Confidence 99999987543 245889999999999999999999987 999999999999999999999999999876433211
Q ss_pred CccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChhH--HHHHhhcCccccccCCCCCCCCHH
Q 003703 613 SFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWPTF 689 (801)
Q Consensus 613 ~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~~--~~~~~~~g~~~~~~d~~~~~~~~~ 689 (801)
......++..|+|||+..+..++.++|||||||++|+|+| |..||..... ....+..+.. ...+..
T Consensus 159 ---~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~--------~~~~~~ 227 (260)
T cd05069 159 ---ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYR--------MPCPQG 227 (260)
T ss_pred ---ccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC--------CCCCcc
Confidence 1123346788999999988899999999999999999999 8999964332 2222222110 112234
Q ss_pred HHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHH
Q 003703 690 VARRLVDLGLQCCELYGRERPDITPSLVKELEQ 722 (801)
Q Consensus 690 ~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~ 722 (801)
.+..+.+++.+||..+|.+||++. .+.+.|+.
T Consensus 228 ~~~~~~~li~~~l~~~p~~Rp~~~-~i~~~l~~ 259 (260)
T cd05069 228 CPESLHELMKLCWKKDPDERPTFE-YIQSFLED 259 (260)
T ss_pred cCHHHHHHHHHHccCCcccCcCHH-HHHHHHhc
Confidence 556899999999999999999998 77777763
No 137
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=7.2e-36 Score=322.16 Aligned_cols=259 Identities=25% Similarity=0.412 Sum_probs=195.7
Q ss_pred cCccccceeeecCceEEEEEEECC----------------eEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEec
Q 003703 455 CNFSESFKVGQGGFGCVYKGEMLG----------------RTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLG 517 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~g----------------~~vAiK~l~~~~~-~~~~~f~~E~~il~~l~HpnIV~l~g 517 (801)
++|...+.||+|+||.||++...+ ..||+|.+..... .....|.+|++++.+++||||+++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 467778889999999999987532 3589999876533 23446899999999999999999999
Q ss_pred ccc--CCcceeeecCCCCchhhhhhhcC---------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCee
Q 003703 518 ACP--EAWSLVYEYLPNGSLQDRLFRKS---------NVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNIL 586 (801)
Q Consensus 518 ~~~--~~~~LV~E~~~~gsL~~~L~~~~---------~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NIL 586 (801)
+|. ...++||||+++++|.+++.... ....++|..++.++.+++.||.|||+.+ ++||||||+|||
T Consensus 85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~Nil 161 (295)
T cd05097 85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN---FVHRDLATRNCL 161 (295)
T ss_pred EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcC---eeccccChhhEE
Confidence 984 45789999999999999886532 1134789999999999999999999987 999999999999
Q ss_pred ecCCCCeeeecccceeeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh--CCCCCCChh
Q 003703 587 LDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT--GRLPVGLAG 664 (801)
Q Consensus 587 Ld~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt--G~~Pf~~~~ 664 (801)
++.++.+||+|||++......... .......+++.|+|||++..+.++.++|||||||++|+|++ |..||....
T Consensus 162 l~~~~~~kl~dfg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~ 237 (295)
T cd05097 162 VGNHYTIKIADFGMSRNLYSGDYY----RIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLS 237 (295)
T ss_pred EcCCCcEEecccccccccccCcce----eccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccC
Confidence 999999999999999865432211 12233456789999999988899999999999999999998 667886432
Q ss_pred HHHHHhhcCcccccc-CCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHH
Q 003703 665 EVRRAVSCGKLSSIL-DPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELE 721 (801)
Q Consensus 665 ~~~~~~~~g~~~~~~-d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~ 721 (801)
.....-......... .......+...+..+.+|+.+||+.+|.+||++. .+.+.|+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~-~i~~~l~ 294 (295)
T cd05097 238 DEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFN-KIHHFLR 294 (295)
T ss_pred hHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHH-HHHHHHh
Confidence 211000000000000 0000111222456899999999999999999998 6766664
No 138
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=2.7e-36 Score=337.47 Aligned_cols=250 Identities=22% Similarity=0.274 Sum_probs=190.3
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccceee
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVY 527 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~---~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~ 527 (801)
++|...+.||+|+||.||++... |..||||++..... .....+.+|+.++..++|||||+++++|.+ ..+|||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 36888899999999999999874 88999999865422 223457889999999999999999999854 578999
Q ss_pred ecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCC
Q 003703 528 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 607 (801)
Q Consensus 528 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~ 607 (801)
||+++|+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.+...
T Consensus 81 E~~~gg~L~~~l~~~---~~~~~~~~~~~~~ql~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~kl~DfGla~~~~~~ 154 (377)
T cd05629 81 EFLPGGDLMTMLIKY---DTFSEDVTRFYMAECVLAIEAVHKLG---FIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQ 154 (377)
T ss_pred eCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCCCCEEEeecccccccccc
Confidence 999999999998654 35788899999999999999999988 999999999999999999999999999643211
Q ss_pred CCc------------CCC-----------------------------ccccCCCCCCCCCCCccccccCCCCcchhHHhH
Q 003703 608 TLY------------LPS-----------------------------FHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSF 646 (801)
Q Consensus 608 ~~~------------~~~-----------------------------~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSl 646 (801)
... ... ........||+.|+|||++.+..++.++|||||
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSl 234 (377)
T cd05629 155 HDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSL 234 (377)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEec
Confidence 000 000 000113579999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCChhHH--HHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCC---CchHHH
Q 003703 647 GLIILQLLTGRLPVGLAGEV--RRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERP---DITPSL 716 (801)
Q Consensus 647 GvvL~ELltG~~Pf~~~~~~--~~~~~~g~~~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RP---t~~e~l 716 (801)
||+||||+||.+||...... ...+.... ..+.-+ + ....+..+.+|+.+|+. +|.+|+ ++.+.+
T Consensus 235 Gvil~elltG~~Pf~~~~~~~~~~~i~~~~-~~~~~p---~-~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l 303 (377)
T cd05629 235 GAIMFECLIGWPPFCSENSHETYRKIINWR-ETLYFP---D-DIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIK 303 (377)
T ss_pred chhhhhhhcCCCCCCCCCHHHHHHHHHccC-CccCCC---C-CCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHh
Confidence 99999999999999643322 11111110 000001 1 11245678899999997 777764 666444
No 139
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=1.4e-35 Score=314.55 Aligned_cols=253 Identities=26% Similarity=0.431 Sum_probs=199.8
Q ss_pred hcCccccceeeecCceEEEEEEEC--C---eEEEEEEeccCC-cccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccce
Q 003703 454 TCNFSESFKVGQGGFGCVYKGEML--G---RTVAIKMLYSHN-MQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSL 525 (801)
Q Consensus 454 t~~f~~~~~LG~G~fG~Vy~g~~~--g---~~vAiK~l~~~~-~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~L 525 (801)
+++|...+.||+|+||.||+|.+. + ..+|+|.+.... ......|.+|+.++.+++||||+++++++.+ ..++
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMI 83 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEE
Confidence 356788889999999999999874 3 379999986543 2334568899999999999999999999853 5789
Q ss_pred eeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeecc
Q 003703 526 VYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVT 605 (801)
Q Consensus 526 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~ 605 (801)
||||+++++|.+++.... ..+++..+..++.+++.||.|||+.+ ++|+||||+||+++.++.+||+|||++....
T Consensus 84 v~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~ 158 (268)
T cd05063 84 ITEYMENGALDKYLRDHD--GEFSSYQLVGMLRGIAAGMKYLSDMN---YVHRDLAARNILVNSNLECKVSDFGLSRVLE 158 (268)
T ss_pred EEEcCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEEcCCCcEEECCCccceecc
Confidence 999999999999986543 46899999999999999999999987 9999999999999999999999999998765
Q ss_pred CCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChh--HHHHHhhcCccccccCCC
Q 003703 606 EDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAG--EVRRAVSCGKLSSILDPL 682 (801)
Q Consensus 606 ~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~--~~~~~~~~g~~~~~~d~~ 682 (801)
...... .......+++.|+|||++....++.++|||||||++|||+| |+.||.... .....+..+. ..
T Consensus 159 ~~~~~~---~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~----~~-- 229 (268)
T cd05063 159 DDPEGT---YTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGF----RL-- 229 (268)
T ss_pred cccccc---eeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCC----CC--
Confidence 332111 11122234567999999988899999999999999999998 999995332 2222232221 01
Q ss_pred CCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHHh
Q 003703 683 AGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 723 (801)
Q Consensus 683 ~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~l 723 (801)
..+...+..+.+++.+||+.+|.+||++. .+...|+.+
T Consensus 230 --~~~~~~~~~~~~li~~c~~~~p~~Rp~~~-~i~~~l~~~ 267 (268)
T cd05063 230 --PAPMDCPSAVYQLMLQCWQQDRARRPRFV-DIVNLLDKL 267 (268)
T ss_pred --CCCCCCCHHHHHHHHHHcCCCcccCcCHH-HHHHHHHhh
Confidence 11223446789999999999999999999 677777653
No 140
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=1.5e-35 Score=315.63 Aligned_cols=252 Identities=30% Similarity=0.475 Sum_probs=200.8
Q ss_pred hcCccccceeeecCceEEEEEEEC-------CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEeccccC--Cc
Q 003703 454 TCNFSESFKVGQGGFGCVYKGEML-------GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AW 523 (801)
Q Consensus 454 t~~f~~~~~LG~G~fG~Vy~g~~~-------g~~vAiK~l~~~~~-~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~ 523 (801)
.++|.....||+|+||.||+|... +..||+|.+..... .....|.+|+.++..++||||+++++++.. ..
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPT 84 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCc
Confidence 356778889999999999999875 26799999865532 334568899999999999999999998843 57
Q ss_pred ceeeecCCCCchhhhhhhcCC-------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeee
Q 003703 524 SLVYEYLPNGSLQDRLFRKSN-------VSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKIC 596 (801)
Q Consensus 524 ~LV~E~~~~gsL~~~L~~~~~-------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~ 596 (801)
++||||+++|+|.+++..... ...++|..++.|+.|++.||.|||+.+ |+||||||+|||++.++.+||+
T Consensus 85 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~di~p~nill~~~~~~kl~ 161 (277)
T cd05032 85 LVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKK---FVHRDLAARNCMVAEDLTVKIG 161 (277)
T ss_pred EEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccChheEEEcCCCCEEEC
Confidence 899999999999999875432 234789999999999999999999987 9999999999999999999999
Q ss_pred cccceeeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChh--HHHHHhhcC
Q 003703 597 DFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAG--EVRRAVSCG 673 (801)
Q Consensus 597 DFGla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~--~~~~~~~~g 673 (801)
|||+++.+...... .......+|..|+|||++.++.++.++|||||||++|||+| |..||.... .....+..+
T Consensus 162 dfg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~ 237 (277)
T cd05032 162 DFGMTRDIYETDYY----RKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDG 237 (277)
T ss_pred CcccchhhccCccc----ccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHhcC
Confidence 99999876543321 12234457889999999988899999999999999999998 999986332 223333322
Q ss_pred ccccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHH
Q 003703 674 KLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELE 721 (801)
Q Consensus 674 ~~~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~ 721 (801)
... ..|...+..+.+++.+||+.+|.+|||+. ++...|+
T Consensus 238 ~~~--------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~-~l~~~l~ 276 (277)
T cd05032 238 GHL--------DLPENCPDKLLELMRMCWQYNPKMRPTFL-EIVSSLK 276 (277)
T ss_pred CCC--------CCCCCCCHHHHHHHHHHcCCChhhCCCHH-HHHHHhc
Confidence 211 12223466899999999999999999998 5655553
No 141
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=7.7e-36 Score=321.06 Aligned_cols=256 Identities=28% Similarity=0.456 Sum_probs=203.0
Q ss_pred HHhcCccccceeeecCceEEEEEEEC-------CeEEEEEEeccCCc-ccHHHHHHHHHHHhcC-CCCceeeEeccccC-
Q 003703 452 TATCNFSESFKVGQGGFGCVYKGEML-------GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKL-QHPHLVTLLGACPE- 521 (801)
Q Consensus 452 ~at~~f~~~~~LG~G~fG~Vy~g~~~-------g~~vAiK~l~~~~~-~~~~~f~~E~~il~~l-~HpnIV~l~g~~~~- 521 (801)
...++|.....||+|+||.||++... ...||+|.+..... .....+.+|+.++.++ +||||++++++|..
T Consensus 9 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 88 (293)
T cd05053 9 LPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQE 88 (293)
T ss_pred cCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCC
Confidence 34456788889999999999999864 26799999875432 3334688999999999 89999999999854
Q ss_pred -CcceeeecCCCCchhhhhhhc-------------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeee
Q 003703 522 -AWSLVYEYLPNGSLQDRLFRK-------------SNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILL 587 (801)
Q Consensus 522 -~~~LV~E~~~~gsL~~~L~~~-------------~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILL 587 (801)
..+++|||+++|+|.+++... .....+++..++.++.|++.||.|||+.+ |+||||||+|||+
T Consensus 89 ~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~Nil~ 165 (293)
T cd05053 89 GPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKK---CIHRDLAARNVLV 165 (293)
T ss_pred CCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCC---ccccccceeeEEE
Confidence 478999999999999998643 22356899999999999999999999987 9999999999999
Q ss_pred cCCCCeeeecccceeeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChh--
Q 003703 588 DSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAG-- 664 (801)
Q Consensus 588 d~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~-- 664 (801)
+.++.+||+|||+++.+...... .......+++.|+|||++.+..++.++|||||||++|||++ |..||....
T Consensus 166 ~~~~~~kL~Dfg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~ 241 (293)
T cd05053 166 TEDHVMKIADFGLARDIHHIDYY----RKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE 241 (293)
T ss_pred cCCCeEEeCccccccccccccce----eccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHH
Confidence 99999999999999876543211 11223345678999999988899999999999999999998 999986433
Q ss_pred HHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHHh
Q 003703 665 EVRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 723 (801)
Q Consensus 665 ~~~~~~~~g~~~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~l 723 (801)
.....+..+.. ...+...+..+.+|+.+||..+|.+|||+. +++..|+.+
T Consensus 242 ~~~~~~~~~~~--------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~-eil~~l~~~ 291 (293)
T cd05053 242 ELFKLLKEGYR--------MEKPQNCTQELYHLMRDCWHEVPSQRPTFK-QLVEDLDRM 291 (293)
T ss_pred HHHHHHHcCCc--------CCCCCCCCHHHHHHHHHHcccCcccCcCHH-HHHHHHHHh
Confidence 23333322221 122333456889999999999999999998 677777654
No 142
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.2e-35 Score=330.02 Aligned_cols=252 Identities=21% Similarity=0.243 Sum_probs=192.8
Q ss_pred HhcCccccceeeecCceEEEEEEEC--CeEEEEEEeccCC--cccHHHHHHHHHHHhcCCCCceeeEeccccC-------
Q 003703 453 ATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHN--MQGQLEFQQEVRVLSKLQHPHLVTLLGACPE------- 521 (801)
Q Consensus 453 at~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~--~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~------- 521 (801)
..++|...+.||+|+||.||++... |..||+|++.... ......+.+|+.++..++||||+++++++..
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 3478999999999999999999874 8899999986542 2334567899999999999999999998732
Q ss_pred -CcceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccc
Q 003703 522 -AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGI 600 (801)
Q Consensus 522 -~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGl 600 (801)
..++||||+++ +|...+. ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~~~---ivHrDlkp~NIl~~~~~~~kl~Dfg~ 169 (359)
T cd07876 99 QDVYLVMELMDA-NLCQVIH-----MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 169 (359)
T ss_pred ceeEEEEeCCCc-CHHHHHh-----ccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEecCCC
Confidence 25899999965 5655553 24778889999999999999999988 99999999999999999999999999
Q ss_pred eeeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHH---h-------
Q 003703 601 CRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRA---V------- 670 (801)
Q Consensus 601 a~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~---~------- 670 (801)
++...... ......||+.|+|||++.+..++.++|||||||++|+|+||+.||...+..... +
T Consensus 170 a~~~~~~~-------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~ 242 (359)
T cd07876 170 ARTACTNF-------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPS 242 (359)
T ss_pred ccccccCc-------cCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCc
Confidence 97643221 123457899999999999999999999999999999999999999743321100 0
Q ss_pred ---------------hc-Cccc-----c----ccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHH
Q 003703 671 ---------------SC-GKLS-----S----ILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKEL 720 (801)
Q Consensus 671 ---------------~~-g~~~-----~----~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L 720 (801)
.. .... + ...+.........+..+.+|+.+||..||.+|||+.+.+.+..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~ 317 (359)
T cd07876 243 AEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPY 317 (359)
T ss_pred HHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCch
Confidence 00 0000 0 0000000111123457899999999999999999997665543
No 143
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.3e-36 Score=317.22 Aligned_cols=246 Identities=26% Similarity=0.312 Sum_probs=198.0
Q ss_pred ccccceeeecCceEEEEEEECC--eEEEEEEeccCCcccH---HHHHHHHHHHhcCCCCceeeEecccc--CCcceeeec
Q 003703 457 FSESFKVGQGGFGCVYKGEMLG--RTVAIKMLYSHNMQGQ---LEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEY 529 (801)
Q Consensus 457 f~~~~~LG~G~fG~Vy~g~~~g--~~vAiK~l~~~~~~~~---~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~LV~E~ 529 (801)
|...+.||.|.-|+||++.+.| ..+|+|++.+...... .....|-+||+.++||.++.||..|. +..||||||
T Consensus 79 f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~mey 158 (459)
T KOG0610|consen 79 FRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVMEY 158 (459)
T ss_pred HHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEec
Confidence 4445679999999999999985 7899999987765433 34678999999999999999999995 457899999
Q ss_pred CCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCC
Q 003703 530 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTL 609 (801)
Q Consensus 530 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~ 609 (801)
|+||+|...+++.. ...|+...+..++.+|+.||+|||..| ||.|||||+||||.++|++.|+||.|+........
T Consensus 159 CpGGdL~~LrqkQp-~~~fse~~aRFYaAEvl~ALEYLHmlG---ivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt 234 (459)
T KOG0610|consen 159 CPGGDLHSLRQKQP-GKRFSESAARFYAAEVLLALEYLHMLG---IVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPT 234 (459)
T ss_pred CCCccHHHHHhhCC-CCccchhhHHHHHHHHHHHHHHHHhhc---eeeccCCcceeEEecCCcEEeeeccccccCCCCCe
Confidence 99999998776553 467899999999999999999999999 99999999999999999999999999864321000
Q ss_pred --------------------------------c------------------CCCccccCCCCCCCCCCCccccccCCCCc
Q 003703 610 --------------------------------Y------------------LPSFHRSTAPKGSFPYADPEYHRTGVLTP 639 (801)
Q Consensus 610 --------------------------------~------------------~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ 639 (801)
. .+...++...+||-.|+|||++.+.+.+.
T Consensus 235 ~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgs 314 (459)
T KOG0610|consen 235 LVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGS 314 (459)
T ss_pred eeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCCc
Confidence 0 11112344678999999999999999999
Q ss_pred chhHHhHHHHHHHHHhCCCCCCChhHHHHHhhcCccccccCC--CCCCCCHHHHHHHHHHHHHhhhhCCCCCCCch
Q 003703 640 KSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDP--LAGDWPTFVARRLVDLGLQCCELYGRERPDIT 713 (801)
Q Consensus 640 ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~g~~~~~~d~--~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~ 713 (801)
++|||+|||+|||||.|..||...+.-.. +..++-. ...+.+ ..+..+.+||.+.|.+||.+|-...
T Consensus 315 AVDWWtfGIflYEmLyG~TPFKG~~~~~T------l~NIv~~~l~Fp~~~-~vs~~akDLIr~LLvKdP~kRlg~~ 383 (459)
T KOG0610|consen 315 AVDWWTFGIFLYEMLYGTTPFKGSNNKET------LRNIVGQPLKFPEEP-EVSSAAKDLIRKLLVKDPSKRLGSK 383 (459)
T ss_pred hhhHHHHHHHHHHHHhCCCCcCCCCchhh------HHHHhcCCCcCCCCC-cchhHHHHHHHHHhccChhhhhccc
Confidence 99999999999999999999975543211 1222211 122333 5678899999999999999999854
No 144
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=2e-35 Score=312.97 Aligned_cols=246 Identities=26% Similarity=0.429 Sum_probs=196.1
Q ss_pred ccccceeeecCceEEEEEEEC--CeEEEEEEeccCCccc---------HHHHHHHHHHHhcCCCCceeeEecccc--CCc
Q 003703 457 FSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQG---------QLEFQQEVRVLSKLQHPHLVTLLGACP--EAW 523 (801)
Q Consensus 457 f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~---------~~~f~~E~~il~~l~HpnIV~l~g~~~--~~~ 523 (801)
|.....||.|+||.||+|... +..||+|.+....... ...+.+|+.++.+++||||+++++++. +..
T Consensus 2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (267)
T cd06628 2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL 81 (267)
T ss_pred ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence 566778999999999999874 7899999886543321 245789999999999999999999884 357
Q ss_pred ceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceee
Q 003703 524 SLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRL 603 (801)
Q Consensus 524 ~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~ 603 (801)
++||||+++++|.+++... ..+++..+..++.+++.||.|||+.+ ++||||+|+||+++.++.+||+|||+++.
T Consensus 82 ~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~~l~~~l~~lH~~~---ivH~di~p~nil~~~~~~~~l~dfg~~~~ 155 (267)
T cd06628 82 NIFLEYVPGGSVAALLNNY---GAFEETLVRNFVRQILKGLNYLHNRG---IIHRDIKGANILVDNKGGIKISDFGISKK 155 (267)
T ss_pred EEEEEecCCCCHHHHHHhc---cCccHHHHHHHHHHHHHHHHHHHhcC---cccccCCHHHEEEcCCCCEEecccCCCcc
Confidence 8999999999999999654 35788999999999999999999987 99999999999999999999999999987
Q ss_pred ccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhhcCccccccCCCC
Q 003703 604 VTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLA 683 (801)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~g~~~~~~d~~~ 683 (801)
..................|++.|+|||++.+..++.++|||||||++|+|++|+.||.............. ...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~------~~~ 229 (267)
T cd06628 156 LEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGE------NAS 229 (267)
T ss_pred cccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhc------cCC
Confidence 75322111111112335688999999999988999999999999999999999999975544332221111 111
Q ss_pred CCCCHHHHHHHHHHHHHhhhhCCCCCCCchH
Q 003703 684 GDWPTFVARRLVDLGLQCCELYGRERPDITP 714 (801)
Q Consensus 684 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e 714 (801)
...+...+..+.+++.+||+.+|.+||++.+
T Consensus 230 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ 260 (267)
T cd06628 230 PEIPSNISSEAIDFLEKTFEIDHNKRPTAAE 260 (267)
T ss_pred CcCCcccCHHHHHHHHHHccCCchhCcCHHH
Confidence 1233345678899999999999999999874
No 145
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=1.9e-35 Score=314.25 Aligned_cols=252 Identities=25% Similarity=0.399 Sum_probs=201.7
Q ss_pred cCccccceeeecCceEEEEEEECC-----eEEEEEEeccCC-cccHHHHHHHHHHHhcCCCCceeeEeccccC-Ccceee
Q 003703 455 CNFSESFKVGQGGFGCVYKGEMLG-----RTVAIKMLYSHN-MQGQLEFQQEVRVLSKLQHPHLVTLLGACPE-AWSLVY 527 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~g-----~~vAiK~l~~~~-~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~-~~~LV~ 527 (801)
++|.....||+|+||.||+|.+.. ..||||...... ......|.+|+.++..++||||++++++|.+ ..++||
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~lv~ 85 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITENPVWIVM 85 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcCCCcEEEE
Confidence 457777899999999999998642 369999887654 3445578999999999999999999998854 578999
Q ss_pred ecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCC
Q 003703 528 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 607 (801)
Q Consensus 528 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~ 607 (801)
||+++|+|.+++.... ..+++..++.++.+++.||.|||+.+ ++|+||||+|||++.++.+||+|||+++.....
T Consensus 86 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~---~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~ 160 (270)
T cd05056 86 ELAPLGELRSYLQVNK--YSLDLASLILYSYQLSTALAYLESKR---FVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDE 160 (270)
T ss_pred EcCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccChheEEEecCCCeEEccCceeeecccc
Confidence 9999999999996543 35899999999999999999999987 999999999999999999999999999876543
Q ss_pred CCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChhHH--HHHhhcCccccccCCCCC
Q 003703 608 TLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGEV--RRAVSCGKLSSILDPLAG 684 (801)
Q Consensus 608 ~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~--~~~~~~g~~~~~~d~~~~ 684 (801)
... ......+++.|+|||++....++.++|||||||++|||++ |..||...... ...+..+...
T Consensus 161 ~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~-------- 227 (270)
T cd05056 161 SYY-----KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGERL-------- 227 (270)
T ss_pred cce-----ecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCcC--------
Confidence 211 1223345678999999988889999999999999999996 99999654332 1222222111
Q ss_pred CCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHHhhh
Q 003703 685 DWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHV 725 (801)
Q Consensus 685 ~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~l~~ 725 (801)
..+...+..+.+++.+|+..+|.+||++. .+...|+.+..
T Consensus 228 ~~~~~~~~~~~~li~~~l~~~P~~Rpt~~-~~~~~l~~~~~ 267 (270)
T cd05056 228 PMPPNCPPTLYSLMTKCWAYDPSKRPRFT-ELKAQLSDILQ 267 (270)
T ss_pred CCCCCCCHHHHHHHHHHcCCChhhCcCHH-HHHHHHHHHHh
Confidence 11223456899999999999999999998 67777776543
No 146
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=2.6e-35 Score=311.72 Aligned_cols=251 Identities=24% Similarity=0.383 Sum_probs=203.4
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccceee
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVY 527 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~---~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~ 527 (801)
++|...+.||+|+||.||+|... |..||+|.++.... .....+.+|+.++.+++|+||+++++++.+ ..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 57888899999999999999885 89999998864332 234568899999999999999999998843 478999
Q ss_pred ecCCCCchhhhhhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccC
Q 003703 528 EYLPNGSLQDRLFRKS-NVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTE 606 (801)
Q Consensus 528 E~~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~ 606 (801)
||+++|+|.+++.... ....+++..++.++.+++.||.|||+.+ |+|+||+|+||+++.++.++|+|||++..+..
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKR---IMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCC---EecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 9999999999886532 2345889999999999999999999987 99999999999999999999999999987643
Q ss_pred CCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhH----HHHHhhcCccccccCCC
Q 003703 607 DTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE----VRRAVSCGKLSSILDPL 682 (801)
Q Consensus 607 ~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~----~~~~~~~g~~~~~~d~~ 682 (801)
... ......|++.|+|||++.+..++.++|||||||++|+|++|+.||..... +...+..+...
T Consensus 159 ~~~------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~------ 226 (267)
T cd08224 159 KTT------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYP------ 226 (267)
T ss_pred CCc------ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCCCC------
Confidence 321 12344689999999999888999999999999999999999999853321 11112222111
Q ss_pred CCCCCH-HHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHHh
Q 003703 683 AGDWPT-FVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 723 (801)
Q Consensus 683 ~~~~~~-~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~l 723 (801)
..+. ..+..+.+++.+||..+|.+||++. .+...|+.+
T Consensus 227 --~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~-~il~~~~~~ 265 (267)
T cd08224 227 --PLPADHYSEELRDLVSRCINPDPEKRPDIS-YVLQVAKEM 265 (267)
T ss_pred --CCChhhcCHHHHHHHHHHcCCCcccCCCHH-HHHHHHHHh
Confidence 1122 4556889999999999999999998 677777765
No 147
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.4e-35 Score=322.00 Aligned_cols=255 Identities=27% Similarity=0.445 Sum_probs=202.1
Q ss_pred cCccccceeeecCceEEEEEEEC---------CeEEEEEEeccCCc-ccHHHHHHHHHHHhcC-CCCceeeEeccccC--
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML---------GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKL-QHPHLVTLLGACPE-- 521 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~---------g~~vAiK~l~~~~~-~~~~~f~~E~~il~~l-~HpnIV~l~g~~~~-- 521 (801)
++|...+.||+|+||.||++... +..||+|.+..... .....+.+|+.++..+ +||||++++++|.+
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 97 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 97 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence 56888899999999999999763 24699999876432 3345688899999999 79999999999853
Q ss_pred CcceeeecCCCCchhhhhhhcCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeec
Q 003703 522 AWSLVYEYLPNGSLQDRLFRKSN-------------VSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLD 588 (801)
Q Consensus 522 ~~~LV~E~~~~gsL~~~L~~~~~-------------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd 588 (801)
..++||||+++|+|.+++..... ...++|..++.|+.|++.||.|||+.+ ++||||||+|||++
T Consensus 98 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---i~H~dlkp~Nill~ 174 (307)
T cd05098 98 PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVLVT 174 (307)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC---cccccccHHheEEc
Confidence 57899999999999999976432 135899999999999999999999987 99999999999999
Q ss_pred CCCCeeeecccceeeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChh--H
Q 003703 589 SELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAG--E 665 (801)
Q Consensus 589 ~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~--~ 665 (801)
.++.+||+|||+++........ .......+++.|+|||++.+..++.++|||||||++|||++ |..||.... .
T Consensus 175 ~~~~~kL~dfg~a~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~ 250 (307)
T cd05098 175 EDNVMKIADFGLARDIHHIDYY----KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 250 (307)
T ss_pred CCCcEEECCCcccccccccchh----hccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHH
Confidence 9999999999998766432211 11222335678999999988899999999999999999998 888986433 2
Q ss_pred HHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHHhhh
Q 003703 666 VRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHV 725 (801)
Q Consensus 666 ~~~~~~~g~~~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~l~~ 725 (801)
+...+..+.. ...+...+..+.+|+.+||..+|.+||++. +++..|+.+..
T Consensus 251 ~~~~~~~~~~--------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~-evl~~l~~~~~ 301 (307)
T cd05098 251 LFKLLKEGHR--------MDKPSNCTNELYMMMRDCWHAVPSQRPTFK-QLVEDLDRILA 301 (307)
T ss_pred HHHHHHcCCC--------CCCCCcCCHHHHHHHHHHcccChhhCcCHH-HHHHHHHHHHH
Confidence 2233332221 122333456889999999999999999999 78888877643
No 148
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=1.3e-35 Score=316.96 Aligned_cols=252 Identities=25% Similarity=0.409 Sum_probs=198.0
Q ss_pred HhcCccccceeeecCceEEEEEEEC-------CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEecccc--CC
Q 003703 453 ATCNFSESFKVGQGGFGCVYKGEML-------GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACP--EA 522 (801)
Q Consensus 453 at~~f~~~~~LG~G~fG~Vy~g~~~-------g~~vAiK~l~~~~~-~~~~~f~~E~~il~~l~HpnIV~l~g~~~--~~ 522 (801)
.+++|...+.||+|+||.||+|.+. +..||+|.+..... .....|.+|+.++..++||||+++++++. +.
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP 83 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence 3467888899999999999999884 36799998865432 33456899999999999999999999874 35
Q ss_pred cceeeecCCCCchhhhhhhcCC----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCC---Ceee
Q 003703 523 WSLVYEYLPNGSLQDRLFRKSN----VSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSEL---SSKI 595 (801)
Q Consensus 523 ~~LV~E~~~~gsL~~~L~~~~~----~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~---~vKL 595 (801)
.++||||+++|+|.+++..... ...++|..+++++.||+.||.|||+.+ ++||||||+|||++.++ .+||
T Consensus 84 ~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~nil~~~~~~~~~~kl 160 (277)
T cd05036 84 RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENH---FIHRDIAARNCLLTCKGPGRVAKI 160 (277)
T ss_pred cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccchheEEEeccCCCcceEe
Confidence 7899999999999999876532 235899999999999999999999988 99999999999998754 5999
Q ss_pred ecccceeeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChh--HHHHHhhc
Q 003703 596 CDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAG--EVRRAVSC 672 (801)
Q Consensus 596 ~DFGla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~--~~~~~~~~ 672 (801)
+|||+++.+...... .......+++.|+|||++.+..++.++|||||||++|||++ |..||.... .....+..
T Consensus 161 ~dfg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~ 236 (277)
T cd05036 161 ADFGMARDIYRASYY----RKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTG 236 (277)
T ss_pred ccCccccccCCccce----ecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc
Confidence 999999876432211 11123334578999999999999999999999999999997 999996433 22222222
Q ss_pred CccccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHH
Q 003703 673 GKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKEL 720 (801)
Q Consensus 673 g~~~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L 720 (801)
+. ...++...+..+.+++.+||+.+|.+||++. +|++.|
T Consensus 237 ~~--------~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~-~vl~~l 275 (277)
T cd05036 237 GG--------RLDPPKGCPGPVYRIMTDCWQHTPEDRPNFA-TILERI 275 (277)
T ss_pred CC--------cCCCCCCCCHHHHHHHHHHcCCCcccCcCHH-HHHHHh
Confidence 11 1123344567899999999999999999999 455544
No 149
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=5.1e-36 Score=328.34 Aligned_cols=239 Identities=26% Similarity=0.329 Sum_probs=188.4
Q ss_pred eeeecCceEEEEEEEC--CeEEEEEEeccCCc---ccHHHHHHHHH-HHhcCCCCceeeEecccc--CCcceeeecCCCC
Q 003703 462 KVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVR-VLSKLQHPHLVTLLGACP--EAWSLVYEYLPNG 533 (801)
Q Consensus 462 ~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~---~~~~~f~~E~~-il~~l~HpnIV~l~g~~~--~~~~LV~E~~~~g 533 (801)
.||+|+||.||+++.. +..||+|++..... .....+..|.. ++..++||||+++++++. +..++||||+++|
T Consensus 2 ~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~~ 81 (325)
T cd05602 2 VIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGG 81 (325)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCCC
Confidence 6999999999999885 67899999865422 22233444444 567889999999999884 3578999999999
Q ss_pred chhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCCC
Q 003703 534 SLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPS 613 (801)
Q Consensus 534 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~~ 613 (801)
+|.+++.... .++......++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 82 ~L~~~~~~~~---~~~~~~~~~~~~qi~~~L~~lH~~g---iiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~----- 150 (325)
T cd05602 82 ELFYHLQRER---CFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN----- 150 (325)
T ss_pred cHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEEccCCCCcccccCC-----
Confidence 9999886543 4677888889999999999999988 9999999999999999999999999997543221
Q ss_pred ccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHH--HHHhhcCccccccCCCCCCCCHHHH
Q 003703 614 FHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEV--RRAVSCGKLSSILDPLAGDWPTFVA 691 (801)
Q Consensus 614 ~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~--~~~~~~g~~~~~~d~~~~~~~~~~~ 691 (801)
.......||+.|+|||++.+..++.++|||||||++|+|++|++||...... ...+..+.. ..+...+
T Consensus 151 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~---------~~~~~~~ 220 (325)
T cd05602 151 -GTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPL---------QLKPNIT 220 (325)
T ss_pred -CCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCc---------CCCCCCC
Confidence 1234557999999999999999999999999999999999999999744322 122222111 1223355
Q ss_pred HHHHHHHHHhhhhCCCCCCCchHHHHHHHH
Q 003703 692 RRLVDLGLQCCELYGRERPDITPSLVKELE 721 (801)
Q Consensus 692 ~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~ 721 (801)
..+.+++.+|++.||.+||+..+.+.+.++
T Consensus 221 ~~~~~li~~~l~~~p~~R~~~~~~~~~i~~ 250 (325)
T cd05602 221 NSARHLLEGLLQKDRTKRLGAKDDFMEIKN 250 (325)
T ss_pred HHHHHHHHHHcccCHHHCCCCCCCHHHHhc
Confidence 678999999999999999999865554444
No 150
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.4e-36 Score=316.35 Aligned_cols=252 Identities=25% Similarity=0.339 Sum_probs=192.6
Q ss_pred hcCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEecccc----C---Ccc
Q 003703 454 TCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP----E---AWS 524 (801)
Q Consensus 454 t~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~----~---~~~ 524 (801)
+-.|...+++|.|+||.||.|.+. +..||||+.-.+... -.+|+.+|++++|||||+|..+|. . ...
T Consensus 23 ~i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~----knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~ln 98 (364)
T KOG0658|consen 23 EISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY----KNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLN 98 (364)
T ss_pred EEEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc----CcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHH
Confidence 345667789999999999999886 689999987654432 236999999999999999988772 2 245
Q ss_pred eeeecCCCCchhhhhhhc-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCC-CCeeeeccccee
Q 003703 525 LVYEYLPNGSLQDRLFRK-SNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSE-LSSKICDFGICR 602 (801)
Q Consensus 525 LV~E~~~~gsL~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~-~~vKL~DFGla~ 602 (801)
|||||||. +|...+... .....++.-.+.-+..||++||.|||+.+ |+||||||.|||+|.+ |.+||||||.|+
T Consensus 99 lVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~---IcHRDIKPqNlLvD~~tg~LKicDFGSAK 174 (364)
T KOG0658|consen 99 LVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHG---ICHRDIKPQNLLVDPDTGVLKICDFGSAK 174 (364)
T ss_pred HHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcC---cccCCCChheEEEcCCCCeEEeccCCcce
Confidence 89999975 788877643 11245666677788999999999999987 9999999999999976 899999999999
Q ss_pred eccCCCCcCCCccccCCCCCCCCCCCcccccc-CCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhh----------
Q 003703 603 LVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVS---------- 671 (801)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~-~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~---------- 671 (801)
.+..+... .....|-.|.|||.+.+ ..|+.+.||||.|||+.||+-|++-|.+...+.++..
T Consensus 175 ~L~~~epn-------iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~ 247 (364)
T KOG0658|consen 175 VLVKGEPN-------ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTR 247 (364)
T ss_pred eeccCCCc-------eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCH
Confidence 98765532 33456778999997765 5799999999999999999999999975433322211
Q ss_pred ----c-------CccccccCCCCCC-CCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHH
Q 003703 672 ----C-------GKLSSILDPLAGD-WPTFVARRLVDLGLQCCELYGRERPDITPSLVKEL 720 (801)
Q Consensus 672 ----~-------g~~~~~~d~~~~~-~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L 720 (801)
. .++..+....... +......+..+|+.+++..+|..|.+..+.+.+.+
T Consensus 248 e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~f 308 (364)
T KOG0658|consen 248 EDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPF 308 (364)
T ss_pred HHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchh
Confidence 0 1111111111111 34456678999999999999999999998776655
No 151
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=1.3e-35 Score=333.85 Aligned_cols=256 Identities=29% Similarity=0.437 Sum_probs=202.0
Q ss_pred HHhcCccccceeeecCceEEEEEEEC-------CeEEEEEEeccCCccc-HHHHHHHHHHHhcCC-CCceeeEeccccC-
Q 003703 452 TATCNFSESFKVGQGGFGCVYKGEML-------GRTVAIKMLYSHNMQG-QLEFQQEVRVLSKLQ-HPHLVTLLGACPE- 521 (801)
Q Consensus 452 ~at~~f~~~~~LG~G~fG~Vy~g~~~-------g~~vAiK~l~~~~~~~-~~~f~~E~~il~~l~-HpnIV~l~g~~~~- 521 (801)
...++|...++||+|+||.||+|++. +..||+|+++...... ...+.+|+.+|.++. |||||+++|+|..
T Consensus 34 ~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~ 113 (401)
T cd05107 34 MPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKG 113 (401)
T ss_pred ecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccC
Confidence 34456777889999999999999864 3589999997653332 346889999999997 9999999999954
Q ss_pred -CcceeeecCCCCchhhhhhhcCC--------------------------------------------------------
Q 003703 522 -AWSLVYEYLPNGSLQDRLFRKSN-------------------------------------------------------- 544 (801)
Q Consensus 522 -~~~LV~E~~~~gsL~~~L~~~~~-------------------------------------------------------- 544 (801)
..++||||+++|+|.+++.....
T Consensus 114 ~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (401)
T cd05107 114 GPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQ 193 (401)
T ss_pred CCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchh
Confidence 47899999999999999865321
Q ss_pred ---------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCe
Q 003703 545 ---------------------------------------VSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNI 585 (801)
Q Consensus 545 ---------------------------------------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NI 585 (801)
...++|...+.|+.||+.||.|||+.+ |+||||||+||
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrdlkp~Ni 270 (401)
T cd05107 194 DMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKN---CVHRDLAARNV 270 (401)
T ss_pred cchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC---cCcccCCcceE
Confidence 124678889999999999999999977 99999999999
Q ss_pred eecCCCCeeeecccceeeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChh
Q 003703 586 LLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAG 664 (801)
Q Consensus 586 LLd~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~ 664 (801)
|++.++.+||+|||+++........ .......|++.|+|||++....++.++|||||||++|||++ |..||....
T Consensus 271 Ll~~~~~~kL~DfGla~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~ 346 (401)
T cd05107 271 LICEGKLVKICDFGLARDIMRDSNY----ISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELP 346 (401)
T ss_pred EEeCCCEEEEEecCcceeccccccc----ccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCC
Confidence 9999999999999999875432211 11233457889999999998899999999999999999998 899986432
Q ss_pred H---HHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHHh
Q 003703 665 E---VRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 723 (801)
Q Consensus 665 ~---~~~~~~~g~~~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~l 723 (801)
. ....+..+... ..+...+..+.+|+.+||..+|..||++. +|++.|+.+
T Consensus 347 ~~~~~~~~~~~~~~~--------~~p~~~~~~l~~li~~cl~~~P~~RPs~~-ell~~L~~~ 399 (401)
T cd05107 347 MNEQFYNAIKRGYRM--------AKPAHASDEIYEIMQKCWEEKFEIRPDFS-QLVHLVGDL 399 (401)
T ss_pred chHHHHHHHHcCCCC--------CCCCCCCHHHHHHHHHHcCCChhHCcCHH-HHHHHHHHH
Confidence 2 12222222111 12233456899999999999999999999 777778764
No 152
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=1.7e-35 Score=319.59 Aligned_cols=253 Identities=28% Similarity=0.441 Sum_probs=197.0
Q ss_pred cCccccceeeecCceEEEEEEEC--C--eEEEEEEeccCC-cccHHHHHHHHHHHhcC-CCCceeeEeccccC--Cccee
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--G--RTVAIKMLYSHN-MQGQLEFQQEVRVLSKL-QHPHLVTLLGACPE--AWSLV 526 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g--~~vAiK~l~~~~-~~~~~~f~~E~~il~~l-~HpnIV~l~g~~~~--~~~LV 526 (801)
++|.....||+|+||.||+|... + ..+++|.++... ......|.+|+.++.++ +||||+++++++.+ ..++|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 46778889999999999999874 3 347888886432 23345688999999999 79999999999854 47899
Q ss_pred eecCCCCchhhhhhhcC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCe
Q 003703 527 YEYLPNGSLQDRLFRKS-------------NVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSS 593 (801)
Q Consensus 527 ~E~~~~gsL~~~L~~~~-------------~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~v 593 (801)
|||+++|+|.+++.... ....+++..++.|+.|++.||.|||+.+ |+||||||+|||++.++.+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~ 158 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQ---FIHRDLAARNVLVGENLAS 158 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCcCCcceEEECCCCeE
Confidence 99999999999986532 1235889999999999999999999987 9999999999999999999
Q ss_pred eeecccceeeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChhH--HHHHh
Q 003703 594 KICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAV 670 (801)
Q Consensus 594 KL~DFGla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~~--~~~~~ 670 (801)
||+|||++....... ......++..|+|||++....++.++|||||||++|||+| |..||..... ....+
T Consensus 159 kl~dfg~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~ 231 (297)
T cd05089 159 KIADFGLSRGEEVYV-------KKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKL 231 (297)
T ss_pred EECCcCCCcccccee-------ccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 999999986432111 1112233567999999988899999999999999999998 9999964322 22222
Q ss_pred hcCccccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHHhhhc
Q 003703 671 SCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHVA 726 (801)
Q Consensus 671 ~~g~~~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~l~~~ 726 (801)
..+. ....+...+..+.+|+.+||+.+|.+||++. .+++.|+.+...
T Consensus 232 ~~~~--------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~-~i~~~l~~~~~~ 278 (297)
T cd05089 232 PQGY--------RMEKPRNCDDEVYELMRQCWRDRPYERPPFA-QISVQLSRMLEA 278 (297)
T ss_pred hcCC--------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHH-HHHHHHHHHHHh
Confidence 2221 1112233556789999999999999999999 666777766543
No 153
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=1.5e-35 Score=316.69 Aligned_cols=255 Identities=24% Similarity=0.321 Sum_probs=203.0
Q ss_pred hcCccccceeeecCceEEEEEEEC------CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEecccc---CCc
Q 003703 454 TCNFSESFKVGQGGFGCVYKGEML------GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACP---EAW 523 (801)
Q Consensus 454 t~~f~~~~~LG~G~fG~Vy~g~~~------g~~vAiK~l~~~~~-~~~~~f~~E~~il~~l~HpnIV~l~g~~~---~~~ 523 (801)
.++|.....||+|+||.||+|.+. +..|++|++..... .....+.+|+.++.+++||||+++++++. ...
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 84 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPP 84 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC
Confidence 457788889999999999999874 47899999875432 33456889999999999999999999873 347
Q ss_pred ceeeecCCCCchhhhhhhcCCC-----CCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecc
Q 003703 524 SLVYEYLPNGSLQDRLFRKSNV-----SPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDF 598 (801)
Q Consensus 524 ~LV~E~~~~gsL~~~L~~~~~~-----~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DF 598 (801)
+++++|+++|+|.+++...... ..+++..++.++.+++.||.|||+.+ ++||||||+|||++.++.+||+||
T Consensus 85 ~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---i~H~di~p~nil~~~~~~~kl~d~ 161 (280)
T cd05043 85 FVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRG---VIHKDIAARNCVIDEELQVKITDN 161 (280)
T ss_pred EEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCHhhEEEcCCCcEEECCC
Confidence 8999999999999998764322 46899999999999999999999987 999999999999999999999999
Q ss_pred cceeeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChhH--HHHHhhcCcc
Q 003703 599 GICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKL 675 (801)
Q Consensus 599 Gla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~~--~~~~~~~g~~ 675 (801)
|+++.+...... .......++..|+|||++.+..++.++|||||||++||+++ |+.||..... ....+..+..
T Consensus 162 g~~~~~~~~~~~----~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~ 237 (280)
T cd05043 162 ALSRDLFPMDYH----CLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDGYR 237 (280)
T ss_pred CCcccccCCceE----EeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcCCC
Confidence 999866433211 01123356778999999988899999999999999999999 9999974332 2222222211
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHHhh
Q 003703 676 SSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLH 724 (801)
Q Consensus 676 ~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~l~ 724 (801)
...+...+..+.+++.+||..+|.+||++. +++..|+.+.
T Consensus 238 --------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~-~~~~~l~~~~ 277 (280)
T cd05043 238 --------LAQPINCPDELFAVMACCWALDPEERPSFS-QLVQCLTDFH 277 (280)
T ss_pred --------CCCCCcCCHHHHHHHHHHcCCChhhCCCHH-HHHHHHHHHH
Confidence 011222456789999999999999999998 7888887654
No 154
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=2e-35 Score=320.20 Aligned_cols=252 Identities=28% Similarity=0.471 Sum_probs=199.7
Q ss_pred cCccccceeeecCceEEEEEEEC--Ce----EEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEeccccC-Cccee
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GR----TVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACPE-AWSLV 526 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~----~vAiK~l~~~~~-~~~~~f~~E~~il~~l~HpnIV~l~g~~~~-~~~LV 526 (801)
.+|...+.||+|+||.||+|.+. |. .||+|.+..... .....+.+|+.++..++||||++++|+|.. ..+++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~v 86 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQLV 86 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCCCceee
Confidence 45667778999999999999873 43 579998875543 223468899999999999999999999843 46799
Q ss_pred eecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccC
Q 003703 527 YEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTE 606 (801)
Q Consensus 527 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~ 606 (801)
++|+++|+|.+++.... ..+++..++.++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 87 ~e~~~~g~l~~~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~ 161 (303)
T cd05110 87 TQLMPHGCLLDYVHEHK--DNIGSQLLLNWCVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLEG 161 (303)
T ss_pred ehhcCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHhhcC---eeccccccceeeecCCCceEEccccccccccC
Confidence 99999999999886543 35889999999999999999999987 99999999999999999999999999987653
Q ss_pred CCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCCh--hHHHHHhhcCccccccCCCC
Q 003703 607 DTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLA--GEVRRAVSCGKLSSILDPLA 683 (801)
Q Consensus 607 ~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~--~~~~~~~~~g~~~~~~d~~~ 683 (801)
.... .......++..|+|||++.+..++.++|||||||++|||++ |+.||... ......+..+....
T Consensus 162 ~~~~----~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~------ 231 (303)
T cd05110 162 DEKE----YNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERLP------ 231 (303)
T ss_pred cccc----cccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCCC------
Confidence 3211 11223456788999999998999999999999999999997 99999642 23333333322111
Q ss_pred CCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHHhh
Q 003703 684 GDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLH 724 (801)
Q Consensus 684 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~l~ 724 (801)
.+...+..+.+++..||..+|.+||++. .++..|..+.
T Consensus 232 --~~~~~~~~~~~li~~c~~~~p~~Rp~~~-~l~~~l~~~~ 269 (303)
T cd05110 232 --QPPICTIDVYMVMVKCWMIDADSRPKFK-ELAAEFSRMA 269 (303)
T ss_pred --CCCCCCHHHHHHHHHHcCCChhhCcCHH-HHHHHHHHHH
Confidence 1112345788999999999999999998 6777887764
No 155
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.8e-35 Score=320.40 Aligned_cols=256 Identities=27% Similarity=0.448 Sum_probs=202.6
Q ss_pred hcCccccceeeecCceEEEEEEEC---------CeEEEEEEeccCCc-ccHHHHHHHHHHHhcC-CCCceeeEeccccC-
Q 003703 454 TCNFSESFKVGQGGFGCVYKGEML---------GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKL-QHPHLVTLLGACPE- 521 (801)
Q Consensus 454 t~~f~~~~~LG~G~fG~Vy~g~~~---------g~~vAiK~l~~~~~-~~~~~f~~E~~il~~l-~HpnIV~l~g~~~~- 521 (801)
..+|.....||+|+||.||+++.. +..||+|.+..... .....+.+|+.++..+ +||||++++++|..
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 93 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 93 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence 456777889999999999999752 34799999865432 3345688999999999 89999999999854
Q ss_pred -CcceeeecCCCCchhhhhhhcCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeee
Q 003703 522 -AWSLVYEYLPNGSLQDRLFRKSN-------------VSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILL 587 (801)
Q Consensus 522 -~~~LV~E~~~~gsL~~~L~~~~~-------------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILL 587 (801)
..++||||+++|+|.+++..... ...++|..++.++.||+.||.|||+.+ |+||||||+|||+
T Consensus 94 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~g---ivH~dlkp~Nili 170 (304)
T cd05101 94 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQK---CIHRDLAARNVLV 170 (304)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCC---eeecccccceEEE
Confidence 47899999999999999876431 235789999999999999999999987 9999999999999
Q ss_pred cCCCCeeeecccceeeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChh--
Q 003703 588 DSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAG-- 664 (801)
Q Consensus 588 d~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~-- 664 (801)
+.++.+||+|||+++.+...... .......+++.|+|||++.+..++.++|||||||++|+|++ |..||....
T Consensus 171 ~~~~~~kl~D~g~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~ 246 (304)
T cd05101 171 TENNVMKIADFGLARDVNNIDYY----KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE 246 (304)
T ss_pred cCCCcEEECCCccceeccccccc----ccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH
Confidence 99999999999999877543211 12233456788999999988899999999999999999998 788886332
Q ss_pred HHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHHhhh
Q 003703 665 EVRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHV 725 (801)
Q Consensus 665 ~~~~~~~~g~~~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~l~~ 725 (801)
.+...+..+... ..+...+..+.+|+.+||+.+|.+||++. ++++.|+.+..
T Consensus 247 ~~~~~~~~~~~~--------~~~~~~~~~~~~li~~cl~~~p~~Rps~~-e~l~~l~~~~~ 298 (304)
T cd05101 247 ELFKLLKEGHRM--------DKPANCTNELYMMMRDCWHAIPSHRPTFK-QLVEDLDRILT 298 (304)
T ss_pred HHHHHHHcCCcC--------CCCCCCCHHHHHHHHHHcccChhhCCCHH-HHHHHHHHHHH
Confidence 233333322211 11223456789999999999999999998 78788877643
No 156
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=2.5e-35 Score=311.27 Aligned_cols=248 Identities=25% Similarity=0.347 Sum_probs=197.9
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcc-----cHHHHHHHHHHHhcCCCCceeeEeccccC--Ccce
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ-----GQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSL 525 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~-----~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~L 525 (801)
++|...+.||+|+||.||++... +..||+|.+...... ....+.+|+.++.+++||||+++++++.+ ..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 46888899999999999999874 899999998654321 22458899999999999999999999843 5789
Q ss_pred eeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeecc
Q 003703 526 VYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVT 605 (801)
Q Consensus 526 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~ 605 (801)
||||+++++|.+.+... ..+++..+..++.+++.||.|||+.+ |+|+||+|+||+++.++.++|+|||+++...
T Consensus 82 v~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~ 155 (263)
T cd06625 82 FMEYMPGGSVKDQLKAY---GALTETVTRKYTRQILEGVEYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRLQ 155 (263)
T ss_pred EEEECCCCcHHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccceecc
Confidence 99999999999988654 35788999999999999999999988 9999999999999999999999999998654
Q ss_pred CCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhhcCccccccCCCCCC
Q 003703 606 EDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGD 685 (801)
Q Consensus 606 ~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~g~~~~~~d~~~~~ 685 (801)
...... .......|+..|+|||++.+..++.++|||||||++|||++|+.||.............. ......
T Consensus 156 ~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~-----~~~~~~ 227 (263)
T cd06625 156 TICSSG---TGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIAT-----QPTNPQ 227 (263)
T ss_pred cccccc---ccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhc-----cCCCCC
Confidence 322110 011345688999999999998999999999999999999999999965433222111110 011122
Q ss_pred CCHHHHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 686 WPTFVARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 686 ~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
.+...+..+.+++.+||..+|.+||++.+.+
T Consensus 228 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll 258 (263)
T cd06625 228 LPSHVSPDARNFLRRTFVENAKKRPSAEELL 258 (263)
T ss_pred CCccCCHHHHHHHHHHhhcCcccCCCHHHHh
Confidence 3444667889999999999999999998533
No 157
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=3.6e-36 Score=335.65 Aligned_cols=245 Identities=24% Similarity=0.309 Sum_probs=194.1
Q ss_pred HhcCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccce
Q 003703 453 ATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSL 525 (801)
Q Consensus 453 at~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~---~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~L 525 (801)
..++|...+.||+|+||.||+++.. +..||+|++..... .....+.+|+.++..++||||+++++++.+ ..++
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l 120 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM 120 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence 3457888899999999999999885 78999999865322 223457789999999999999999998854 4789
Q ss_pred eeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeecc
Q 003703 526 VYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVT 605 (801)
Q Consensus 526 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~ 605 (801)
||||+++|+|.+++... .++...+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++....
T Consensus 121 v~Ey~~gg~L~~~l~~~----~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~ 193 (370)
T cd05596 121 VMEYMPGGDLVNLMSNY----DIPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMD 193 (370)
T ss_pred EEcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEcCCCCEEEEeccceeecc
Confidence 99999999999988543 4677888899999999999999987 9999999999999999999999999998764
Q ss_pred CCCCcCCCccccCCCCCCCCCCCccccccC----CCCcchhHHhHHHHHHHHHhCCCCCCChhHH--HHHhhcCcccccc
Q 003703 606 EDTLYLPSFHRSTAPKGSFPYADPEYHRTG----VLTPKSDSYSFGLIILQLLTGRLPVGLAGEV--RRAVSCGKLSSIL 679 (801)
Q Consensus 606 ~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~----~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~--~~~~~~g~~~~~~ 679 (801)
.... .......||+.|+|||++.+. .++.++|||||||++|||++|++||...... ...+..+.. .
T Consensus 194 ~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~-~-- 265 (370)
T cd05596 194 ANGM-----VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKN-S-- 265 (370)
T ss_pred CCCc-----ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCC-c--
Confidence 3321 122345799999999988643 4789999999999999999999999754332 222221110 0
Q ss_pred CCCCCCCCH--HHHHHHHHHHHHhhhhCCCC--CCCchHHH
Q 003703 680 DPLAGDWPT--FVARRLVDLGLQCCELYGRE--RPDITPSL 716 (801)
Q Consensus 680 d~~~~~~~~--~~~~~l~~Li~~Cl~~dP~~--RPt~~e~l 716 (801)
..+|. ..+..+.+|+.+|++.+|.+ ||++.+.+
T Consensus 266 ----~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell 302 (370)
T cd05596 266 ----LTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIK 302 (370)
T ss_pred ----CCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHh
Confidence 11121 24678899999999999987 99988544
No 158
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=2.6e-35 Score=312.03 Aligned_cols=251 Identities=25% Similarity=0.395 Sum_probs=196.9
Q ss_pred CccccceeeecCceEEEEEEEC-CeEEEEEEeccCCc------ccHHHHHHHHHHHhcCCCCceeeEeccccC--Cccee
Q 003703 456 NFSESFKVGQGGFGCVYKGEML-GRTVAIKMLYSHNM------QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLV 526 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~-g~~vAiK~l~~~~~------~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV 526 (801)
+|.....||.|+||.||+|... |..+|+|.+..... .....+.+|+.+++.++|+||++++++|.+ ..++|
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 3667788999999999999874 88899998865432 112358899999999999999999999854 47899
Q ss_pred eecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccC
Q 003703 527 YEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTE 606 (801)
Q Consensus 527 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~ 606 (801)
|||+++++|.+++.... .+++..+..++.|++.||.|||+.+ |+|+||+|+||+++.++.++|+|||++.....
T Consensus 81 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 154 (265)
T cd06631 81 MEFVPGGSISSILNRFG---PLPEPVFCKYTKQILDGVAYLHNNC---VVHRDIKGNNVMLMPNGIIKLIDFGCARRLAW 154 (265)
T ss_pred EecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHhEEECCCCeEEeccchhhHhhhh
Confidence 99999999999986543 5788999999999999999999987 99999999999999999999999999886532
Q ss_pred CCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhhcCccccccCCCCCCC
Q 003703 607 DTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDW 686 (801)
Q Consensus 607 ~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~g~~~~~~d~~~~~~ 686 (801)
...............|++.|+|||++.+..++.++|||||||++|+|++|..||...+........+...... ...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~----~~~ 230 (265)
T cd06631 155 VGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLM----PRL 230 (265)
T ss_pred ccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCC----CCC
Confidence 2111111112234568999999999999899999999999999999999999997544332222111111111 112
Q ss_pred CHHHHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 687 PTFVARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 687 ~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
+...+..+.+++.+||+.+|.+||++.+.+
T Consensus 231 ~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l 260 (265)
T cd06631 231 PDSFSAAAIDFVTSCLTRDQHERPSALQLL 260 (265)
T ss_pred CCCCCHHHHHHHHHHhcCCcccCCCHHHHh
Confidence 333556789999999999999999998533
No 159
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-36 Score=300.57 Aligned_cols=264 Identities=22% Similarity=0.291 Sum_probs=208.2
Q ss_pred HHhcCccccceeeecCceEEEEEEE--CCeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEecccc-------CC
Q 003703 452 TATCNFSESFKVGQGGFGCVYKGEM--LGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP-------EA 522 (801)
Q Consensus 452 ~at~~f~~~~~LG~G~fG~Vy~g~~--~g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~-------~~ 522 (801)
...++|.+.+.||+|||+-||.++. ++..||+|++.....++.+...+|++..++++|||+++++.++. +.
T Consensus 18 In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~ 97 (302)
T KOG2345|consen 18 INNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHE 97 (302)
T ss_pred EcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCcee
Confidence 4457899999999999999999875 48899999998877777888999999999999999999998871 23
Q ss_pred cceeeecCCCCchhhhhhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccce
Q 003703 523 WSLVYEYLPNGSLQDRLFRKS-NVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGIC 601 (801)
Q Consensus 523 ~~LV~E~~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla 601 (801)
.+|++.|...|||.+.+.... ....++....+.|+.+|++||.+||...| |++||||||.|||+.+.+.++|.|||.+
T Consensus 98 ~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~-~yAH~DiKP~NILls~~~~~vl~D~GS~ 176 (302)
T KOG2345|consen 98 AYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEP-PYAHRDIKPANILLSDSGLPVLMDLGSA 176 (302)
T ss_pred EEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCC-cccccCCCcceeEecCCCceEEEeccCc
Confidence 789999999999999987654 33478999999999999999999999985 7999999999999999999999999998
Q ss_pred eeccCCCC---cCCCccccCCCCCCCCCCCccccc---cCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhhcCcc
Q 003703 602 RLVTEDTL---YLPSFHRSTAPKGSFPYADPEYHR---TGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKL 675 (801)
Q Consensus 602 ~~~~~~~~---~~~~~~~~~~~~Gt~~Y~APE~~~---~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~g~~ 675 (801)
....-... .....+....-..|..|.|||.+. +...+.++|||||||+||.|+.|..||...-. ..|.+
T Consensus 177 ~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~-----~GgSl 251 (302)
T KOG2345|consen 177 TQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQ-----QGGSL 251 (302)
T ss_pred cccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhh-----cCCeE
Confidence 76542111 011112233445788999999884 45678999999999999999999999963211 22333
Q ss_pred ccccCCCCCCCC--HHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHH
Q 003703 676 SSILDPLAGDWP--TFVARRLVDLGLQCCELYGRERPDITPSLVKELEQ 722 (801)
Q Consensus 676 ~~~~d~~~~~~~--~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~ 722 (801)
.-.+....-.|| ...++.+.+|+.+|++.||.+||+.. +++..++.
T Consensus 252 aLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~-~ll~~~d~ 299 (302)
T KOG2345|consen 252 ALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIP-ELLSKLDD 299 (302)
T ss_pred EEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHH-HHHHHHHh
Confidence 222222111122 12778999999999999999999999 55555543
No 160
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=6.7e-36 Score=356.81 Aligned_cols=255 Identities=23% Similarity=0.310 Sum_probs=198.2
Q ss_pred HHhcCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEecccc----CCc
Q 003703 452 TATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACP----EAW 523 (801)
Q Consensus 452 ~at~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~--~~~~~f~~E~~il~~l~HpnIV~l~g~~~----~~~ 523 (801)
...++|.....||+|+||.||++++. +..||+|.+..... .....|..|+.+|.+|+|||||+++++|. ...
T Consensus 10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~l 89 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKL 89 (1021)
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEE
Confidence 44568999999999999999999885 78899999875433 23456889999999999999999999873 237
Q ss_pred ceeeecCCCCchhhhhhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCC----CceeeCCCCCCCeeecC---------
Q 003703 524 SLVYEYLPNGSLQDRLFRKS-NVSPLLWKDRARIAAEIASGLCFLHSSKP----EKIVHGDLKPQNILLDS--------- 589 (801)
Q Consensus 524 ~LV~E~~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~aL~yLH~~~~----~~iiHrDIKp~NILLd~--------- 589 (801)
+|||||+++|+|.++|.... ....+++..++.|+.||+.||.|||..++ ++||||||||+||||+.
T Consensus 90 yIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~ 169 (1021)
T PTZ00266 90 YILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKIT 169 (1021)
T ss_pred EEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccccc
Confidence 89999999999999987532 23468999999999999999999998652 35999999999999964
Q ss_pred --------CCCeeeecccceeeccCCCCcCCCccccCCCCCCCCCCCcccccc--CCCCcchhHHhHHHHHHHHHhCCCC
Q 003703 590 --------ELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT--GVLTPKSDSYSFGLIILQLLTGRLP 659 (801)
Q Consensus 590 --------~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~--~~~s~ksDVwSlGvvL~ELltG~~P 659 (801)
.+.+||+|||+++.+.... ......||+.|+|||++.. ..+++++||||||||||||+||+.|
T Consensus 170 ~~~~n~ng~~iVKLsDFGlAr~l~~~s-------~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~P 242 (1021)
T PTZ00266 170 AQANNLNGRPIAKIGDFGLSKNIGIES-------MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTP 242 (1021)
T ss_pred ccccccCCCCceEEccCCccccccccc-------cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCC
Confidence 3458999999998764322 1234579999999998854 4589999999999999999999999
Q ss_pred CCChhHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHH
Q 003703 660 VGLAGEVRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKE 719 (801)
Q Consensus 660 f~~~~~~~~~~~~g~~~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~ 719 (801)
|.........+..-. ...+... ...+..+.+|+..||..+|.+||++.+.+.+.
T Consensus 243 F~~~~~~~qli~~lk--~~p~lpi----~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~ 296 (1021)
T PTZ00266 243 FHKANNFSQLISELK--RGPDLPI----KGKSKELNILIKNLLNLSAKERPSALQCLGYQ 296 (1021)
T ss_pred CCcCCcHHHHHHHHh--cCCCCCc----CCCCHHHHHHHHHHhcCChhHCcCHHHHhccH
Confidence 975433222221100 0001011 12346789999999999999999999655433
No 161
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=1.3e-35 Score=318.90 Aligned_cols=255 Identities=28% Similarity=0.453 Sum_probs=200.3
Q ss_pred HhcCccccceeeecCceEEEEEEEC-------CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEeccccC--C
Q 003703 453 ATCNFSESFKVGQGGFGCVYKGEML-------GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--A 522 (801)
Q Consensus 453 at~~f~~~~~LG~G~fG~Vy~g~~~-------g~~vAiK~l~~~~~-~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~ 522 (801)
.+++|...+.||+|+||.||+|... +..||+|.+..... .....+.+|+.++..++||||+++++++.+ .
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP 83 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 4567888899999999999999653 45799998865432 233468899999999999999999998843 5
Q ss_pred cceeeecCCCCchhhhhhhcC-------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeee
Q 003703 523 WSLVYEYLPNGSLQDRLFRKS-------NVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKI 595 (801)
Q Consensus 523 ~~LV~E~~~~gsL~~~L~~~~-------~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL 595 (801)
.++||||+++|+|.+++.... ....+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||
T Consensus 84 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dikp~nili~~~~~~~L 160 (288)
T cd05061 84 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKI 160 (288)
T ss_pred cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCCChheEEEcCCCcEEE
Confidence 789999999999999996532 1245678889999999999999999987 999999999999999999999
Q ss_pred ecccceeeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChhH--HHHHhhc
Q 003703 596 CDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSC 672 (801)
Q Consensus 596 ~DFGla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~~--~~~~~~~ 672 (801)
+|||+++........ .......++..|+|||.+.++.++.++|||||||++|||++ |..||..... +...+..
T Consensus 161 ~Dfg~~~~~~~~~~~----~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~ 236 (288)
T cd05061 161 GDFGMTRDIYETDYY----RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMD 236 (288)
T ss_pred CcCCccccccccccc----cccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Confidence 999999865433211 11223346778999999998899999999999999999999 7889864332 2222222
Q ss_pred CccccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHHh
Q 003703 673 GKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 723 (801)
Q Consensus 673 g~~~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~l 723 (801)
+... ..+...+..+.+++.+||+.+|.+||++. .+++.|+..
T Consensus 237 ~~~~--------~~~~~~~~~~~~li~~~l~~~p~~Rps~~-~ll~~l~~~ 278 (288)
T cd05061 237 GGYL--------DQPDNCPERVTDLMRMCWQFNPKMRPTFL-EIVNLLKDD 278 (288)
T ss_pred CCCC--------CCCCCCCHHHHHHHHHHcCCChhHCcCHH-HHHHHHHhh
Confidence 2211 12223456899999999999999999998 666666643
No 162
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=2.7e-35 Score=308.93 Aligned_cols=240 Identities=28% Similarity=0.463 Sum_probs=192.3
Q ss_pred eeeecCceEEEEEEEC-CeEEEEEEeccCCcc-cHHHHHHHHHHHhcCCCCceeeEeccccC--CcceeeecCCCCchhh
Q 003703 462 KVGQGGFGCVYKGEML-GRTVAIKMLYSHNMQ-GQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYLPNGSLQD 537 (801)
Q Consensus 462 ~LG~G~fG~Vy~g~~~-g~~vAiK~l~~~~~~-~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E~~~~gsL~~ 537 (801)
+||+|+||.||+|... +..||+|.+...... ....|.+|+.++..++||||++++++|.. ..++||||+++|+|.+
T Consensus 2 ~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 81 (250)
T cd05085 2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLS 81 (250)
T ss_pred ccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHHH
Confidence 6999999999999875 788999998765432 23468899999999999999999999854 5789999999999999
Q ss_pred hhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCCCcccc
Q 003703 538 RLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRS 617 (801)
Q Consensus 538 ~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~~~~~~ 617 (801)
++.... ..+++..++.++.+++.||.|||+.+ ++||||||+||+++.++.+||+|||++......... ..
T Consensus 82 ~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~-----~~ 151 (250)
T cd05085 82 FLRKKK--DELKTKQLVKFALDAAAGMAYLESKN---CIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYS-----SS 151 (250)
T ss_pred HHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccChheEEEcCCCeEEECCCccceeccccccc-----cC
Confidence 886543 45789999999999999999999987 999999999999999999999999999765432211 11
Q ss_pred CCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChhH--HHHHhhcCccccccCCCCCCCCHHHHHHH
Q 003703 618 TAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWPTFVARRL 694 (801)
Q Consensus 618 ~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~~--~~~~~~~g~~~~~~d~~~~~~~~~~~~~l 694 (801)
....+++.|+|||++.++.++.++|||||||++|+|++ |..||..... ....+..+.. ...+...+..+
T Consensus 152 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~ 223 (250)
T cd05085 152 GLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGYR--------MSCPQKCPDDV 223 (250)
T ss_pred CCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCC--------CCCCCCCCHHH
Confidence 22345678999999998999999999999999999999 9999964332 2222222211 11222345689
Q ss_pred HHHHHHhhhhCCCCCCCchHHHHHHH
Q 003703 695 VDLGLQCCELYGRERPDITPSLVKEL 720 (801)
Q Consensus 695 ~~Li~~Cl~~dP~~RPt~~e~l~~~L 720 (801)
.+++.+||+.+|.+||++. ++.+.|
T Consensus 224 ~~li~~~l~~~p~~Rp~~~-~l~~~l 248 (250)
T cd05085 224 YKVMQRCWDYKPENRPKFS-ELQKEL 248 (250)
T ss_pred HHHHHHHcccCcccCCCHH-HHHHHh
Confidence 9999999999999999998 565554
No 163
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=1.1e-35 Score=331.81 Aligned_cols=252 Identities=24% Similarity=0.330 Sum_probs=191.7
Q ss_pred CccccceeeecCceEEEEEEEC--CeEEEEEEeccCC--cccHHHHHHHHHHHhcCCCCceeeEeccccC-------Ccc
Q 003703 456 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHN--MQGQLEFQQEVRVLSKLQHPHLVTLLGACPE-------AWS 524 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~--~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~-------~~~ 524 (801)
+|...+.||+|+||.||++... |+.||||++.... ......+.+|+.++..++||||+++++++.. ..+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 4778889999999999999874 8999999986532 2234568899999999999999999998843 468
Q ss_pred eeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeec
Q 003703 525 LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLV 604 (801)
Q Consensus 525 LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~ 604 (801)
+||||+. ++|.+.+... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 81 lv~e~~~-~~l~~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~ 153 (372)
T cd07853 81 VVTELMQ-SDLHKIIVSP---QPLSSDHVKVFLYQILRGLKYLHSAG---ILHRDIKPGNLLVNSNCVLKICDFGLARVE 153 (372)
T ss_pred EEeeccc-cCHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChHHEEECCCCCEEeccccceeec
Confidence 9999996 5777777543 36889999999999999999999988 999999999999999999999999999876
Q ss_pred cCCCCcCCCccccCCCCCCCCCCCccccccC-CCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHH--hh----cCccc-
Q 003703 605 TEDTLYLPSFHRSTAPKGSFPYADPEYHRTG-VLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRA--VS----CGKLS- 676 (801)
Q Consensus 605 ~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~-~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~--~~----~g~~~- 676 (801)
...... ......||+.|+|||++.+. .++.++|||||||++|||++|++||......... +. .....
T Consensus 154 ~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~ 228 (372)
T cd07853 154 EPDESK-----HMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEA 228 (372)
T ss_pred ccCccc-----cCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHH
Confidence 433211 12345689999999988764 5799999999999999999999999643321110 00 00000
Q ss_pred ----------ccc-CCC-------CCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHH
Q 003703 677 ----------SIL-DPL-------AGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKE 719 (801)
Q Consensus 677 ----------~~~-d~~-------~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~ 719 (801)
.+. .+. ........+..+.+|+.+||+.||.+|||+.+.+.+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp 289 (372)
T cd07853 229 MRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHP 289 (372)
T ss_pred HHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCH
Confidence 000 000 0011122356789999999999999999998655443
No 164
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=2e-35 Score=316.55 Aligned_cols=258 Identities=24% Similarity=0.324 Sum_probs=202.2
Q ss_pred cCHHHHHHHhcCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcccHHHHHHHHHHHhcC-CCCceeeEecccc-
Q 003703 445 FSLADLQTATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKL-QHPHLVTLLGACP- 520 (801)
Q Consensus 445 ~~~~el~~at~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~~~~f~~E~~il~~l-~HpnIV~l~g~~~- 520 (801)
+.++.+..++++|.....||+|+||.||++... ++.+|+|++..... ....+.+|+.++..+ +||||++++++|.
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 86 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHD-IDEEIEAEYNILKALSDHPNVVKFYGMYYK 86 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccc-hHHHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence 456677778899999999999999999999884 78999998865322 234678899999999 6999999999872
Q ss_pred ------CCcceeeecCCCCchhhhhhhc-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCe
Q 003703 521 ------EAWSLVYEYLPNGSLQDRLFRK-SNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSS 593 (801)
Q Consensus 521 ------~~~~LV~E~~~~gsL~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~v 593 (801)
+..++||||+++|+|.+++... .....+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+
T Consensus 87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~~~~~ 163 (286)
T cd06638 87 KDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNK---TIHRDVKGNNILLTTEGGV 163 (286)
T ss_pred cccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCC---ccccCCCHHhEEECCCCCE
Confidence 2368999999999999987643 22346888999999999999999999987 9999999999999999999
Q ss_pred eeecccceeeccCCCCcCCCccccCCCCCCCCCCCccccc-----cCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHH
Q 003703 594 KICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHR-----TGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRR 668 (801)
Q Consensus 594 KL~DFGla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~-----~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~ 668 (801)
||+|||+++....... ......|++.|+|||++. +..++.++|||||||++|||++|+.||........
T Consensus 164 kl~dfg~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~ 237 (286)
T cd06638 164 KLVDFGVSAQLTSTRL------RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRA 237 (286)
T ss_pred EEccCCceeecccCCC------ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHH
Confidence 9999999987643221 223456999999999875 34578999999999999999999999975443332
Q ss_pred HhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 669 AVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 669 ~~~~g~~~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
........ .+. ...+...+..+.+|+.+||+.+|.+||++.+.+
T Consensus 238 ~~~~~~~~---~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell 281 (286)
T cd06638 238 LFKIPRNP---PPT-LHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLL 281 (286)
T ss_pred HhhccccC---CCc-ccCCCCcCHHHHHHHHHHccCCcccCCCHHHHh
Confidence 22111110 000 011222345789999999999999999998544
No 165
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=2e-35 Score=316.16 Aligned_cols=243 Identities=23% Similarity=0.339 Sum_probs=193.8
Q ss_pred ccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEecccc--CCcceeeecCCC
Q 003703 457 FSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYLPN 532 (801)
Q Consensus 457 f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~LV~E~~~~ 532 (801)
|.....||.|+||.||+|... +..+++|.+..........+.+|+.++..++||||++++++|. ...++||||+++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~ 86 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 86 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence 345567999999999999885 6789999987655555567889999999999999999999874 357899999999
Q ss_pred CchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCC
Q 003703 533 GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLP 612 (801)
Q Consensus 533 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~ 612 (801)
|+|..++.... .++++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 87 ~~l~~~~~~~~--~~l~~~~~~~~~~qi~~~L~~LH~~~---i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~---- 157 (282)
T cd06643 87 GAVDAVMLELE--RPLTEPQIRVVCKQTLEALNYLHENK---IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI---- 157 (282)
T ss_pred CcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEccCCCEEEccccccccccccc----
Confidence 99998876533 46899999999999999999999987 9999999999999999999999999987654321
Q ss_pred CccccCCCCCCCCCCCccccc-----cCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhh--cCccccccCCCCCC
Q 003703 613 SFHRSTAPKGSFPYADPEYHR-----TGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVS--CGKLSSILDPLAGD 685 (801)
Q Consensus 613 ~~~~~~~~~Gt~~Y~APE~~~-----~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~--~g~~~~~~d~~~~~ 685 (801)
.......||+.|+|||++. +..++.++|||||||++|||++|++||........... .+....+ .
T Consensus 158 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~------~ 229 (282)
T cd06643 158 --QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTL------A 229 (282)
T ss_pred --cccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCCC------C
Confidence 1223456899999999873 44578899999999999999999999975443222211 1111111 1
Q ss_pred CCHHHHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 686 WPTFVARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 686 ~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
.+...+..+.+|+.+||+.+|.+||++.+.+
T Consensus 230 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il 260 (282)
T cd06643 230 QPSRWSSEFKDFLKKCLEKNVDARWTTTQLL 260 (282)
T ss_pred CccccCHHHHHHHHHHccCChhhCcCHHHHh
Confidence 1223456889999999999999999998533
No 166
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=2.2e-35 Score=312.65 Aligned_cols=254 Identities=22% Similarity=0.319 Sum_probs=200.9
Q ss_pred CccccceeeecCceEEEEEEE--CCeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEecccc--CCcceeee
Q 003703 456 NFSESFKVGQGGFGCVYKGEM--LGRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYE 528 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~--~g~~vAiK~l~~~~~---~~~~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~LV~E 528 (801)
+|...+.||.|+||.||+|.. .|..||||.+..... .....|.+|+.++..++||||++++++|. +..+++||
T Consensus 3 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 82 (267)
T cd08229 3 NFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLE 82 (267)
T ss_pred hhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEEE
Confidence 567777899999999999986 489999998865332 23346889999999999999999999884 35789999
Q ss_pred cCCCCchhhhhhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCC
Q 003703 529 YLPNGSLQDRLFRKS-NVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 607 (801)
Q Consensus 529 ~~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~ 607 (801)
|+++++|.+++.... ....+++..++.++.+|+.||.|||+.+ ++|+||||+||+++.++.++|+|||++......
T Consensus 83 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd08229 83 LADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSSK 159 (267)
T ss_pred ecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEECcchhhhccccC
Confidence 999999999886432 2346899999999999999999999988 999999999999999999999999998876433
Q ss_pred CCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhH-HHHHhhcCccccccCCCCCCC
Q 003703 608 TLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE-VRRAVSCGKLSSILDPLAGDW 686 (801)
Q Consensus 608 ~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~-~~~~~~~g~~~~~~d~~~~~~ 686 (801)
.. ......|++.|+|||++.+..++.++||||||+++|+|++|..||..... ...... .+.....+. ..
T Consensus 160 ~~------~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~--~~~~~~~~~--~~ 229 (267)
T cd08229 160 TT------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCK--KIEQCDYPP--LP 229 (267)
T ss_pred Cc------ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhh--hhhcCCCCC--CC
Confidence 21 12344689999999999888999999999999999999999999853221 111110 111111110 11
Q ss_pred CHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHHh
Q 003703 687 PTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 723 (801)
Q Consensus 687 ~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~l 723 (801)
+...+..+.+++.+||..+|.+|||+. .|.+.+..+
T Consensus 230 ~~~~~~~~~~li~~~l~~~p~~Rpt~~-~i~~~~~~~ 265 (267)
T cd08229 230 SDHYSEELRQLVNMCINPDPEKRPDIT-YVYDVAKRM 265 (267)
T ss_pred cccccHHHHHHHHHhcCCCcccCCCHH-HHHHHHhhh
Confidence 123567899999999999999999999 777777764
No 167
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=2.5e-35 Score=312.72 Aligned_cols=233 Identities=25% Similarity=0.389 Sum_probs=183.0
Q ss_pred eeeecCceEEEEEEEC--------------CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccce
Q 003703 462 KVGQGGFGCVYKGEML--------------GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSL 525 (801)
Q Consensus 462 ~LG~G~fG~Vy~g~~~--------------g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~L 525 (801)
.||+|+||.||+|... ...||+|.+..........|..|+.++..++||||++++++|.. ..++
T Consensus 2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~l 81 (262)
T cd05077 2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENIM 81 (262)
T ss_pred ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCEE
Confidence 5899999999999753 23589999876555555678899999999999999999999843 5789
Q ss_pred eeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCC-------eeeecc
Q 003703 526 VYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELS-------SKICDF 598 (801)
Q Consensus 526 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~-------vKL~DF 598 (801)
||||+++|+|..++.... ..+++..++.|+.||+.||.|||+.+ |+||||||+|||++.++. +|++||
T Consensus 82 v~e~~~~~~l~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~ 156 (262)
T cd05077 82 VEEFVEFGPLDLFMHRKS--DVLTTPWKFKVAKQLASALSYLEDKD---LVHGNVCTKNILLAREGIDGECGPFIKLSDP 156 (262)
T ss_pred EEecccCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHhhhCC---eECCCCCcccEEEecCCccCCCCceeEeCCC
Confidence 999999999988876543 46899999999999999999999987 999999999999987664 899999
Q ss_pred cceeeccCCCCcCCCccccCCCCCCCCCCCccccc-cCCCCcchhHHhHHHHHHHHH-hCCCCCCChhHHH-HHhhcCcc
Q 003703 599 GICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHR-TGVLTPKSDSYSFGLIILQLL-TGRLPVGLAGEVR-RAVSCGKL 675 (801)
Q Consensus 599 Gla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~-~~~~s~ksDVwSlGvvL~ELl-tG~~Pf~~~~~~~-~~~~~g~~ 675 (801)
|++...... ....|+..|+|||++. +..++.++|||||||++|||+ +|..||....... .....+..
T Consensus 157 g~~~~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~ 226 (262)
T cd05077 157 GIPITVLSR----------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKERFYEGQC 226 (262)
T ss_pred CCCccccCc----------ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHHHHhcCc
Confidence 998654321 2345788999999886 467899999999999999998 5888886432111 11111111
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHH
Q 003703 676 SSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKE 719 (801)
Q Consensus 676 ~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~ 719 (801)
. . .......+.+|+.+||+.||.+||++. +++..
T Consensus 227 ~-~--------~~~~~~~~~~li~~cl~~dp~~Rp~~~-~il~~ 260 (262)
T cd05077 227 M-L--------VTPSCKELADLMTHCMNYDPNQRPFFR-AIMRD 260 (262)
T ss_pred c-C--------CCCChHHHHHHHHHHcCCChhhCcCHH-HHHHh
Confidence 0 0 111245789999999999999999998 45443
No 168
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=8e-36 Score=320.54 Aligned_cols=240 Identities=25% Similarity=0.346 Sum_probs=191.8
Q ss_pred ccccceeeecCceEEEEEEEC--CeEEEEEEeccCCccc---HHHHHHHHHHHhcCCCCceeeEecccc--CCcceeeec
Q 003703 457 FSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQG---QLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEY 529 (801)
Q Consensus 457 f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~---~~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~LV~E~ 529 (801)
|...+.||+|+||.||++... ++.||+|.+....... ...+.+|+.++.+++|+||+++++.+. +..++||||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 666788999999999999885 7899999986543322 235778999999999999999999884 357899999
Q ss_pred CCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCC
Q 003703 530 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTL 609 (801)
Q Consensus 530 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~ 609 (801)
+++|+|.+++..... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.++|+|||++.......
T Consensus 82 ~~g~~L~~~l~~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~---iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~- 156 (285)
T cd05630 82 MNGGDLKFHIYHMGE-AGFEEGRAVFYAAEICCGLEDLHQER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ- 156 (285)
T ss_pred cCCCcHHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHEEECCCCCEEEeeccceeecCCCc-
Confidence 999999998865432 45889999999999999999999987 9999999999999999999999999987654322
Q ss_pred cCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHH--HHHhhcCccccccCCCCCCCC
Q 003703 610 YLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEV--RRAVSCGKLSSILDPLAGDWP 687 (801)
Q Consensus 610 ~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~--~~~~~~g~~~~~~d~~~~~~~ 687 (801)
......||+.|+|||++.+..++.++|||||||++|+|++|+.||...... .... ...++.....++
T Consensus 157 ------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~-----~~~~~~~~~~~~ 225 (285)
T cd05630 157 ------TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEV-----ERLVKEVQEEYS 225 (285)
T ss_pred ------cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHH-----HhhhhhhhhhcC
Confidence 112347999999999999999999999999999999999999999743210 0000 001111111223
Q ss_pred HHHHHHHHHHHHHhhhhCCCCCCCc
Q 003703 688 TFVARRLVDLGLQCCELYGRERPDI 712 (801)
Q Consensus 688 ~~~~~~l~~Li~~Cl~~dP~~RPt~ 712 (801)
...+..+.+|+.+||+.||.+||++
T Consensus 226 ~~~~~~~~~li~~~l~~~p~~R~s~ 250 (285)
T cd05630 226 EKFSPDARSLCKMLLCKDPKERLGC 250 (285)
T ss_pred ccCCHHHHHHHHHHhhcCHHHccCC
Confidence 3455678999999999999999994
No 169
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.7e-35 Score=318.20 Aligned_cols=248 Identities=25% Similarity=0.383 Sum_probs=200.0
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEecccc--CCcceeeecC
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYL 530 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~LV~E~~ 530 (801)
.+|.....||+|+||.||+|... +..||+|.+..........+.+|+.++..++||||+++++.|. ...++||||+
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~ 99 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 99 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeeccc
Confidence 46777888999999999999874 7899999997766655667889999999999999999999874 4578999999
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCc
Q 003703 531 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLY 610 (801)
Q Consensus 531 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~ 610 (801)
++++|.+++.. ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++........
T Consensus 100 ~~~~L~~~~~~----~~~~~~~~~~i~~ql~~aL~~LH~~g---i~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~- 171 (296)
T cd06654 100 AGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS- 171 (296)
T ss_pred CCCCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCEEECccccchhcccccc-
Confidence 99999998853 24788999999999999999999987 99999999999999999999999999876543221
Q ss_pred CCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhhcCccccccCCCCCCCCHHH
Q 003703 611 LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFV 690 (801)
Q Consensus 611 ~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~g~~~~~~d~~~~~~~~~~ 690 (801)
......|++.|+|||++.+..++.++|||||||++|+|++|+.||................ .+ ....+...
T Consensus 172 -----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~---~~-~~~~~~~~ 242 (296)
T cd06654 172 -----KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNG---TP-ELQNPEKL 242 (296)
T ss_pred -----ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCC---CC-CCCCcccc
Confidence 1234468999999999988889999999999999999999999997544322211110000 00 01123345
Q ss_pred HHHHHHHHHHhhhhCCCCCCCchHHHHHH
Q 003703 691 ARRLVDLGLQCCELYGRERPDITPSLVKE 719 (801)
Q Consensus 691 ~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~ 719 (801)
...+.+++.+||..+|.+||++.+.+.+.
T Consensus 243 ~~~l~~li~~~l~~~p~~Rpt~~eil~~~ 271 (296)
T cd06654 243 SAIFRDFLNRCLDMDVEKRGSAKELLQHQ 271 (296)
T ss_pred CHHHHHHHHHHCcCCcccCcCHHHHhhCh
Confidence 66789999999999999999998655433
No 170
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=4.6e-36 Score=308.68 Aligned_cols=250 Identities=24% Similarity=0.309 Sum_probs=195.1
Q ss_pred CccccceeeecCceEEEEEEEC--CeEEEEEEeccCCccc--HHHHHHHHHHHhcCCCCceeeEecc----ccCCcceee
Q 003703 456 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQG--QLEFQQEVRVLSKLQHPHLVTLLGA----CPEAWSLVY 527 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~--~~~f~~E~~il~~l~HpnIV~l~g~----~~~~~~LV~ 527 (801)
+|...+.|++|.||.||+|++. ++.||+|+++...... .-.-.+|+.+|.+++|||||.+-.+ --+..||||
T Consensus 77 efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VM 156 (419)
T KOG0663|consen 77 EFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIVM 156 (419)
T ss_pred HHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeeeH
Confidence 3555667999999999999986 8899999997654322 1235689999999999999998544 456789999
Q ss_pred ecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCC
Q 003703 528 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 607 (801)
Q Consensus 528 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~ 607 (801)
|||+ .+|..++.... .+|...++.-+..|++.||.|||.+. |+||||||+|+|+.+.|.+||+|||+|+.+...
T Consensus 157 e~~E-hDLksl~d~m~--q~F~~~evK~L~~QlL~glk~lH~~w---ilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp 230 (419)
T KOG0663|consen 157 EYVE-HDLKSLMETMK--QPFLPGEVKTLMLQLLRGLKHLHDNW---ILHRDLKTSNLLLSHKGILKIADFGLAREYGSP 230 (419)
T ss_pred HHHH-hhHHHHHHhcc--CCCchHHHHHHHHHHHHHHHHHhhce---eEecccchhheeeccCCcEEecccchhhhhcCC
Confidence 9994 68888887654 57888899999999999999999988 999999999999999999999999999988754
Q ss_pred CCcCCCccccCCCCCCCCCCCccccccC-CCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhh----cCccccccCC-
Q 003703 608 TLYLPSFHRSTAPKGSFPYADPEYHRTG-VLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVS----CGKLSSILDP- 681 (801)
Q Consensus 608 ~~~~~~~~~~~~~~Gt~~Y~APE~~~~~-~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~----~g~~~~~~d~- 681 (801)
. ...+..+-|..|.|||.+.+. .|++..|+||+|||+.||+++++-|....++.+.-. -|.-.+-+-|
T Consensus 231 ~------k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg 304 (419)
T KOG0663|consen 231 L------KPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPG 304 (419)
T ss_pred c------ccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCC
Confidence 3 245677899999999987664 699999999999999999999999975544332211 0110000000
Q ss_pred -------------------CCCCCCHH-HHHHHHHHHHHhhhhCCCCCCCchHHHH
Q 003703 682 -------------------LAGDWPTF-VARRLVDLGLQCCELYGRERPDITPSLV 717 (801)
Q Consensus 682 -------------------~~~~~~~~-~~~~l~~Li~~Cl~~dP~~RPt~~e~l~ 717 (801)
....++.. .++.-++|+...+.+||++|-|+.+.+.
T Consensus 305 ~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~ 360 (419)
T KOG0663|consen 305 YSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK 360 (419)
T ss_pred ccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhc
Confidence 01111111 4467789999999999999999986443
No 171
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=2.7e-35 Score=309.49 Aligned_cols=243 Identities=37% Similarity=0.596 Sum_probs=199.5
Q ss_pred eeeecCceEEEEEEEC-----CeEEEEEEeccCCccc-HHHHHHHHHHHhcCCCCceeeEeccccC--CcceeeecCCCC
Q 003703 462 KVGQGGFGCVYKGEML-----GRTVAIKMLYSHNMQG-QLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYLPNG 533 (801)
Q Consensus 462 ~LG~G~fG~Vy~g~~~-----g~~vAiK~l~~~~~~~-~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E~~~~g 533 (801)
.||+|+||.||+|... +..||+|.+....... ...+.+|+.++..++|+||+++++++.. ..++||||++++
T Consensus 2 ~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 81 (262)
T cd00192 2 KLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEGG 81 (262)
T ss_pred ccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccCC
Confidence 6999999999999886 7789999997765443 5678899999999999999999998854 478999999999
Q ss_pred chhhhhhhcCC------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCC
Q 003703 534 SLQDRLFRKSN------VSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 607 (801)
Q Consensus 534 sL~~~L~~~~~------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~ 607 (801)
+|.+++..... ...+++..+..++.+++.||.|||+.+ |+|+||||+||+++.++.+||+|||++......
T Consensus 82 ~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~ 158 (262)
T cd00192 82 DLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKK---FVHRDLAARNCLVGEDLVVKISDFGLSRDVYDD 158 (262)
T ss_pred cHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCC---cccCccCcceEEECCCCcEEEcccccccccccc
Confidence 99999876521 257899999999999999999999987 999999999999999999999999999877644
Q ss_pred CCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChhH--HHHHhhcCccccccCCCCC
Q 003703 608 TLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKLSSILDPLAG 684 (801)
Q Consensus 608 ~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~~--~~~~~~~g~~~~~~d~~~~ 684 (801)
.. ........+++.|+|||.+....++.++|||||||++|+|++ |..||..... +...+..+. ..
T Consensus 159 ~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~--------~~ 226 (262)
T cd00192 159 DY----YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGY--------RL 226 (262)
T ss_pred cc----cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC--------CC
Confidence 32 122345568899999999988899999999999999999999 6999975432 222232221 11
Q ss_pred CCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHH
Q 003703 685 DWPTFVARRLVDLGLQCCELYGRERPDITPSLVKEL 720 (801)
Q Consensus 685 ~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L 720 (801)
..+...+..+.+++.+||..+|.+||++. +++..|
T Consensus 227 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~-~l~~~l 261 (262)
T cd00192 227 PKPEYCPDELYELMLSCWQLDPEDRPTFS-ELVERL 261 (262)
T ss_pred CCCccCChHHHHHHHHHccCCcccCcCHH-HHHHhh
Confidence 23344567899999999999999999998 555544
No 172
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=2.1e-35 Score=316.71 Aligned_cols=249 Identities=25% Similarity=0.352 Sum_probs=188.9
Q ss_pred CccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcc--cHHHHHHHHHHHhcC---CCCceeeEeccccC-------
Q 003703 456 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ--GQLEFQQEVRVLSKL---QHPHLVTLLGACPE------- 521 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~--~~~~f~~E~~il~~l---~HpnIV~l~g~~~~------- 521 (801)
+|...+.||+|+||.||+|... |+.||+|.+...... ....+.+|+.++..+ +||||++++++|..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 4677789999999999999885 789999998754322 223456777777665 79999999998742
Q ss_pred CcceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccce
Q 003703 522 AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGIC 601 (801)
Q Consensus 522 ~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla 601 (801)
..++||||++ ++|.+++.... ...+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 81 ~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~~~~kl~dfg~~ 155 (288)
T cd07863 81 KVTLVFEHVD-QDLRTYLDKVP-PPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGQVKLADFGLA 155 (288)
T ss_pred eEEEEEcccc-cCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECccCcc
Confidence 2579999997 58888876543 245899999999999999999999988 999999999999999999999999999
Q ss_pred eeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHH---Hhhc-C----
Q 003703 602 RLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRR---AVSC-G---- 673 (801)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~---~~~~-g---- 673 (801)
+...... ......||+.|+|||++.+..++.++|||||||++|+|++|++||........ .... +
T Consensus 156 ~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~ 228 (288)
T cd07863 156 RIYSCQM-------ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE 228 (288)
T ss_pred ccccCcc-------cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCCh
Confidence 8764322 12345689999999999988999999999999999999999999964322111 1100 0
Q ss_pred -cccc-------ccCCCC----CCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 674 -KLSS-------ILDPLA----GDWPTFVARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 674 -~~~~-------~~d~~~----~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
.+.. .+.+.. .......+..+.+|+.+||+.||.+||++.+.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l 283 (288)
T cd07863 229 DDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRAL 283 (288)
T ss_pred hhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHh
Confidence 0000 000000 011123456789999999999999999988543
No 173
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=2.4e-35 Score=316.63 Aligned_cols=252 Identities=29% Similarity=0.477 Sum_probs=200.3
Q ss_pred hcCccccceeeecCceEEEEEEEC-------CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEeccccC--Cc
Q 003703 454 TCNFSESFKVGQGGFGCVYKGEML-------GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AW 523 (801)
Q Consensus 454 t~~f~~~~~LG~G~fG~Vy~g~~~-------g~~vAiK~l~~~~~-~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~ 523 (801)
.++|.....||+|+||.||++... +..||+|++..... .....|.+|+.++..++||||++++++|.+ ..
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~ 83 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM 83 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence 457888889999999999999863 57899999875432 334568899999999999999999999854 47
Q ss_pred ceeeecCCCCchhhhhhhcC-------------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCC
Q 003703 524 SLVYEYLPNGSLQDRLFRKS-------------------NVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQN 584 (801)
Q Consensus 524 ~LV~E~~~~gsL~~~L~~~~-------------------~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~N 584 (801)
++||||+++|+|.+++.... ....+++..++.++.|++.||.|||..+ ++||||||+|
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~---i~H~dl~p~n 160 (288)
T cd05050 84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERK---FVHRDLATRN 160 (288)
T ss_pred EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC---eecccccHhh
Confidence 89999999999999986432 1235788999999999999999999987 9999999999
Q ss_pred eeecCCCCeeeecccceeeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCCh
Q 003703 585 ILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLA 663 (801)
Q Consensus 585 ILLd~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~ 663 (801)
||++.++.++|+|||++......... .......+++.|+|||++.+..++.++|||||||++|||++ |..||...
T Consensus 161 il~~~~~~~~l~dfg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~ 236 (288)
T cd05050 161 CLVGENMVVKIADFGLSRNIYSADYY----KASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGM 236 (288)
T ss_pred eEecCCCceEECccccceecccCccc----cccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999999999999998865432211 11223345678999999988899999999999999999998 88888532
Q ss_pred --hHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHH
Q 003703 664 --GEVRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELE 721 (801)
Q Consensus 664 --~~~~~~~~~g~~~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~ 721 (801)
......+..+... ..+...+..+.+|+.+||+.+|.+||++. ++.+.|+
T Consensus 237 ~~~~~~~~~~~~~~~--------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~-el~~~l~ 287 (288)
T cd05050 237 AHEEVIYYVRDGNVL--------SCPDNCPLELYNLMRLCWSKLPSDRPSFA-SINRILQ 287 (288)
T ss_pred CHHHHHHHHhcCCCC--------CCCCCCCHHHHHHHHHHcccCcccCCCHH-HHHHHhh
Confidence 2232333333321 12223456899999999999999999999 6777765
No 174
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3e-36 Score=328.01 Aligned_cols=257 Identities=27% Similarity=0.434 Sum_probs=215.4
Q ss_pred HHHHHHhcCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccccC--Cc
Q 003703 448 ADLQTATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AW 523 (801)
Q Consensus 448 ~el~~at~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~ 523 (801)
+.++-...+..-.++||.|.||.||.|.|. .-.||||.++.+.+. ..+|..|..+|..++|||+|+|+|+|.. ..
T Consensus 260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMe-veEFLkEAAvMKeikHpNLVqLLGVCT~EpPF 338 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPF 338 (1157)
T ss_pred chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcchh-HHHHHHHHHHHHhhcCccHHHHhhhhccCCCe
Confidence 444444455666789999999999999997 678999999877654 5689999999999999999999999954 47
Q ss_pred ceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceee
Q 003703 524 SLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRL 603 (801)
Q Consensus 524 ~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~ 603 (801)
|||.|||.+|+|.++|..... ..++-...+.++.||+.|+.||...+ +|||||...|+|+.++..|||+||||+++
T Consensus 339 YIiTEfM~yGNLLdYLRecnr-~ev~avvLlyMAtQIsSaMeYLEkkn---FIHRDLAARNCLVgEnhiVKvADFGLsRl 414 (1157)
T KOG4278|consen 339 YIITEFMCYGNLLDYLRECNR-SEVPAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHIVKVADFGLSRL 414 (1157)
T ss_pred EEEEecccCccHHHHHHHhch-hhcchhHHHHHHHHHHHHHHHHHHhh---hhhhhhhhhhccccccceEEeeccchhhh
Confidence 899999999999999987754 45666778899999999999999988 99999999999999999999999999999
Q ss_pred ccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChh--HHHHHhhcCccccccC
Q 003703 604 VTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAG--EVRRAVSCGKLSSILD 680 (801)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~--~~~~~~~~g~~~~~~d 680 (801)
+..+.... .....-.+-|.|||-+....++.|+|||+|||+|||+.| |..||...+ .++.++..|..
T Consensus 415 MtgDTYTA-----HAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkgyR----- 484 (1157)
T KOG4278|consen 415 MTGDTYTA-----HAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGYR----- 484 (1157)
T ss_pred hcCCceec-----ccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhcccc-----
Confidence 97665321 122233567999999999999999999999999999999 888987544 56677766643
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHHh
Q 003703 681 PLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 723 (801)
Q Consensus 681 ~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~l 723 (801)
.+.|..++..+++|++.||+++|.+||+++ ++-+.|+.+
T Consensus 485 ---M~~PeGCPpkVYeLMraCW~WsPsDRPsFa-eiHqafEtm 523 (1157)
T KOG4278|consen 485 ---MDGPEGCPPKVYELMRACWNWSPSDRPSFA-EIHQAFETM 523 (1157)
T ss_pred ---ccCCCCCCHHHHHHHHHHhcCCcccCccHH-HHHHHHHHH
Confidence 234556778999999999999999999999 677777665
No 175
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=2.6e-35 Score=312.78 Aligned_cols=251 Identities=27% Similarity=0.417 Sum_probs=198.9
Q ss_pred cCccccceeeecCceEEEEEEEC-----CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEecccc--CCccee
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML-----GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLV 526 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~-----g~~vAiK~l~~~~~-~~~~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~LV 526 (801)
.+|...+.||+|+||.||+|.+. +..+|+|.+..... .....|.+|+.++.+++||||+++++++. +..++|
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 46777889999999999999863 34799999865432 23456889999999999999999999984 357899
Q ss_pred eecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccC
Q 003703 527 YEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTE 606 (801)
Q Consensus 527 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~ 606 (801)
|||+++|+|.+++.... ..+++..++.|+.|++.||.|||+.+ ++||||||+|||++.++.++|+|||++..+..
T Consensus 84 ~e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~---i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd05066 84 TEYMENGSLDAFLRKHD--GQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILVNSNLVCKVSDFGLSRVLED 158 (267)
T ss_pred EEcCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCC---EeehhhchhcEEECCCCeEEeCCCCccccccc
Confidence 99999999999997653 46899999999999999999999987 99999999999999999999999999987654
Q ss_pred CCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChhH--HHHHhhcCccccccCCCC
Q 003703 607 DTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKLSSILDPLA 683 (801)
Q Consensus 607 ~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~~--~~~~~~~g~~~~~~d~~~ 683 (801)
..... .......++..|+|||++.+..++.++|||||||++||+++ |..||..... ....+..+..
T Consensus 159 ~~~~~---~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~-------- 227 (267)
T cd05066 159 DPEAA---YTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGYR-------- 227 (267)
T ss_pred cccee---eecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCCc--------
Confidence 32111 11122334678999999998899999999999999999887 9999964322 2222322211
Q ss_pred CCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHH
Q 003703 684 GDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQ 722 (801)
Q Consensus 684 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~ 722 (801)
...+...+..+.+++.+|++.+|.+||++. .+.+.|+.
T Consensus 228 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~-~i~~~l~~ 265 (267)
T cd05066 228 LPAPMDCPAALHQLMLDCWQKDRNERPKFE-QIVSILDK 265 (267)
T ss_pred CCCCCCCCHHHHHHHHHHcccCchhCCCHH-HHHHHHHh
Confidence 011223456789999999999999999998 67777765
No 176
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=1.6e-35 Score=321.84 Aligned_cols=253 Identities=21% Similarity=0.311 Sum_probs=192.2
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcc-cHHHHHHHHHHHhcCCCCceeeEecccc--CCcceeeec
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ-GQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEY 529 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~-~~~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~LV~E~ 529 (801)
++|...++||+|+||.||+|+.. +..||+|.+...... ....+.+|+.++.+++||||+++++++. +..++||||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 46788889999999999999875 788999998754332 2345778999999999999999999984 457899999
Q ss_pred CCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCC
Q 003703 530 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTL 609 (801)
Q Consensus 530 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~ 609 (801)
+++ +|.+.+.... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 86 ~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 159 (309)
T cd07872 86 LDK-DLKQYMDDCG--NIMSMHNVKIFLYQILRGLAYCHRRK---VLHRDLKPQNLLINERGELKLADFGLARAKSVPTK 159 (309)
T ss_pred CCC-CHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECccccceecCCCcc
Confidence 975 7888776543 35788999999999999999999987 99999999999999999999999999976543221
Q ss_pred cCCCccccCCCCCCCCCCCcccccc-CCCCcchhHHhHHHHHHHHHhCCCCCCChhHH---HHHhh-cCc-----cccc-
Q 003703 610 YLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEV---RRAVS-CGK-----LSSI- 678 (801)
Q Consensus 610 ~~~~~~~~~~~~Gt~~Y~APE~~~~-~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~---~~~~~-~g~-----~~~~- 678 (801)
......||+.|+|||++.+ ..++.++|||||||++|+|+||++||...+.. ..... .+. +..+
T Consensus 160 ------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (309)
T cd07872 160 ------TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGIS 233 (309)
T ss_pred ------ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhc
Confidence 1234568999999998764 56899999999999999999999999643221 10000 000 0000
Q ss_pred -----cC---CCC-----CCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHH
Q 003703 679 -----LD---PLA-----GDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKE 719 (801)
Q Consensus 679 -----~d---~~~-----~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~ 719 (801)
.+ +.. .......+..+.+|+.+|++.||.+|||+.+.+.+.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~ 287 (309)
T cd07872 234 SNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHA 287 (309)
T ss_pred chhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcCh
Confidence 00 000 001112456788999999999999999998655433
No 177
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=2.3e-35 Score=310.75 Aligned_cols=244 Identities=30% Similarity=0.452 Sum_probs=195.6
Q ss_pred eeeecCceEEEEEEEC---C--eEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEeccccC-CcceeeecCCCCc
Q 003703 462 KVGQGGFGCVYKGEML---G--RTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACPE-AWSLVYEYLPNGS 534 (801)
Q Consensus 462 ~LG~G~fG~Vy~g~~~---g--~~vAiK~l~~~~~-~~~~~f~~E~~il~~l~HpnIV~l~g~~~~-~~~LV~E~~~~gs 534 (801)
.||+|+||.||+|.+. + ..||||.+..... .....|.+|+.++++++||||+++++.+.+ ..++||||+++|+
T Consensus 2 ~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~~~ 81 (257)
T cd05040 2 KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLTHPLMMVTELAPLGS 81 (257)
T ss_pred cCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcCCeEEEEEEecCCCc
Confidence 5899999999999874 2 3699999987766 455679999999999999999999988754 5679999999999
Q ss_pred hhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCCCc
Q 003703 535 LQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSF 614 (801)
Q Consensus 535 L~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~~~ 614 (801)
|.+++..... ..++|...+.++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||+++.+...... +
T Consensus 82 L~~~l~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~---~ 154 (257)
T cd05040 82 LLDRLRKDAL-GHFLISTLCDYAVQIANGMRYLESKR---FIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDH---Y 154 (257)
T ss_pred HHHHHHhccc-ccCcHHHHHHHHHHHHHHHHHHHhCC---ccccccCcccEEEecCCEEEeccccccccccccccc---e
Confidence 9999876543 46899999999999999999999987 999999999999999999999999999877543211 1
Q ss_pred cccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChhHH--HHHhhcCccccccCCCCCCCCHHHH
Q 003703 615 HRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGEV--RRAVSCGKLSSILDPLAGDWPTFVA 691 (801)
Q Consensus 615 ~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~--~~~~~~g~~~~~~d~~~~~~~~~~~ 691 (801)
.......++..|+|||++.+..++.++|||||||++|||+| |..||...... ...+.. .. .....+...+
T Consensus 155 ~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~-~~------~~~~~~~~~~ 227 (257)
T cd05040 155 VMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDK-EG------ERLERPEACP 227 (257)
T ss_pred ecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh-cC------CcCCCCccCC
Confidence 12234567889999999998899999999999999999999 99999643322 111111 00 0111222345
Q ss_pred HHHHHHHHHhhhhCCCCCCCchHHHHHHH
Q 003703 692 RRLVDLGLQCCELYGRERPDITPSLVKEL 720 (801)
Q Consensus 692 ~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L 720 (801)
..+.+++.+||+.+|.+||++. .+...|
T Consensus 228 ~~~~~li~~~l~~~p~~Rps~~-~~~~~l 255 (257)
T cd05040 228 QDIYNVMLQCWAHNPADRPTFA-ALREFL 255 (257)
T ss_pred HHHHHHHHHHCCCCcccCCCHH-HHHHHh
Confidence 6899999999999999999998 555544
No 178
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=2.1e-35 Score=326.10 Aligned_cols=254 Identities=29% Similarity=0.455 Sum_probs=198.3
Q ss_pred cCccccceeeecCceEEEEEEE-------CCeEEEEEEeccCCcc-cHHHHHHHHHHHhcC-CCCceeeEeccccC---C
Q 003703 455 CNFSESFKVGQGGFGCVYKGEM-------LGRTVAIKMLYSHNMQ-GQLEFQQEVRVLSKL-QHPHLVTLLGACPE---A 522 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~-------~g~~vAiK~l~~~~~~-~~~~f~~E~~il~~l-~HpnIV~l~g~~~~---~ 522 (801)
++|...+.||+|+||.||+|.. .++.||||+++..... ....+.+|+.+|.++ +||||++++++|.. .
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 86 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP 86 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCc
Confidence 4678888999999999999974 2678999999754332 334688999999999 68999999998843 3
Q ss_pred cceeeecCCCCchhhhhhhcCC----------------------------------------------------------
Q 003703 523 WSLVYEYLPNGSLQDRLFRKSN---------------------------------------------------------- 544 (801)
Q Consensus 523 ~~LV~E~~~~gsL~~~L~~~~~---------------------------------------------------------- 544 (801)
.++||||+++|+|.+++.....
T Consensus 87 ~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (343)
T cd05103 87 LMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEA 166 (343)
T ss_pred eEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhh
Confidence 6789999999999998864321
Q ss_pred ------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCCCccccC
Q 003703 545 ------VSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRST 618 (801)
Q Consensus 545 ------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~~~~~~~ 618 (801)
...++|..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++........ ....
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~----~~~~ 239 (343)
T cd05103 167 EQEDLYKKVLTLEDLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY----VRKG 239 (343)
T ss_pred hhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCccCeEEEcCCCcEEEEecccccccccCcch----hhcC
Confidence 124788899999999999999999987 999999999999999999999999999876432211 1122
Q ss_pred CCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChh---HHHHHhhcCccccccCCCCCCCCHHHHHHH
Q 003703 619 APKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAG---EVRRAVSCGKLSSILDPLAGDWPTFVARRL 694 (801)
Q Consensus 619 ~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~---~~~~~~~~g~~~~~~d~~~~~~~~~~~~~l 694 (801)
...+++.|+|||++.+..++.++|||||||++|+|++ |..||.... .....+..+.... .+...+..+
T Consensus 240 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~ 311 (343)
T cd05103 240 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR--------APDYTTPEM 311 (343)
T ss_pred CCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCCC--------CCCCCCHHH
Confidence 3456778999999988899999999999999999997 999986432 2222222222111 111234578
Q ss_pred HHHHHHhhhhCCCCCCCchHHHHHHHHHhh
Q 003703 695 VDLGLQCCELYGRERPDITPSLVKELEQLH 724 (801)
Q Consensus 695 ~~Li~~Cl~~dP~~RPt~~e~l~~~L~~l~ 724 (801)
.+++.+||+.+|.+||++. ++++.|+.+.
T Consensus 312 ~~~~~~cl~~~p~~Rps~~-eil~~l~~~~ 340 (343)
T cd05103 312 YQTMLDCWHGEPSQRPTFS-ELVEHLGNLL 340 (343)
T ss_pred HHHHHHHccCChhhCcCHH-HHHHHHHHHH
Confidence 9999999999999999999 6777777653
No 179
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.3e-36 Score=301.47 Aligned_cols=250 Identities=25% Similarity=0.388 Sum_probs=208.8
Q ss_pred HhcCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcc----c----HHHHHHHHHHHhcC-CCCceeeEeccccC
Q 003703 453 ATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ----G----QLEFQQEVRVLSKL-QHPHLVTLLGACPE 521 (801)
Q Consensus 453 at~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~----~----~~~f~~E~~il~~l-~HpnIV~l~g~~~~ 521 (801)
.-++|...+.||.|+.++|-++... |..+|+|++...... . .+.-.+|+.||+++ .||||+++.+++..
T Consensus 15 fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes 94 (411)
T KOG0599|consen 15 FYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYES 94 (411)
T ss_pred HHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccC
Confidence 3456777788999999999988765 889999998543221 1 23467899999998 69999999999965
Q ss_pred C--cceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeeccc
Q 003703 522 A--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFG 599 (801)
Q Consensus 522 ~--~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFG 599 (801)
. .++|+|.|+.|.|.|+|...- .++.....+|+.|+..|+.|||..+ ||||||||+|||+|++.++||+|||
T Consensus 95 ~sF~FlVFdl~prGELFDyLts~V---tlSEK~tR~iMrqlfegVeylHa~~---IVHRDLKpENILlddn~~i~isDFG 168 (411)
T KOG0599|consen 95 DAFVFLVFDLMPRGELFDYLTSKV---TLSEKETRRIMRQLFEGVEYLHARN---IVHRDLKPENILLDDNMNIKISDFG 168 (411)
T ss_pred cchhhhhhhhcccchHHHHhhhhe---eecHHHHHHHHHHHHHHHHHHHHhh---hhhcccChhheeeccccceEEeccc
Confidence 4 678999999999999997653 5788999999999999999999988 9999999999999999999999999
Q ss_pred ceeeccCCCCcCCCccccCCCCCCCCCCCccccc------cCCCCcchhHHhHHHHHHHHHhCCCCCCChhHH--HHHhh
Q 003703 600 ICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHR------TGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEV--RRAVS 671 (801)
Q Consensus 600 la~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~------~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~--~~~~~ 671 (801)
+++.+..+. +-...+|||+|+|||.+. ..+|+..+|.|++|||||-||.|.+||-....+ ..++.
T Consensus 169 Fa~~l~~Ge-------kLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~Im 241 (411)
T KOG0599|consen 169 FACQLEPGE-------KLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIM 241 (411)
T ss_pred eeeccCCch-------hHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHH
Confidence 999887654 446789999999999763 356889999999999999999999999766553 34567
Q ss_pred cCccccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHH
Q 003703 672 CGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKEL 720 (801)
Q Consensus 672 ~g~~~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L 720 (801)
.|++.- ...+|.. .+....+|+.+||+.||..|.|..+.+.+.+
T Consensus 242 eGkyqF----~speWad-is~~~KdLIsrlLqVdp~~Ritake~LaHpf 285 (411)
T KOG0599|consen 242 EGKYQF----RSPEWAD-ISATVKDLISRLLQVDPTKRITAKEALAHPF 285 (411)
T ss_pred hccccc----CCcchhh-ccccHHHHHHHHHeeCchhcccHHHHhcChH
Confidence 776542 3445653 6778999999999999999999998777655
No 180
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=8.8e-36 Score=332.48 Aligned_cols=245 Identities=23% Similarity=0.325 Sum_probs=191.1
Q ss_pred HhcCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccce
Q 003703 453 ATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSL 525 (801)
Q Consensus 453 at~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~---~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~L 525 (801)
..++|...+.||+|+||.||+++.. +..||+|++..... .....+.+|+.++..++||||+++++++.+ ..++
T Consensus 41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~l 120 (370)
T cd05621 41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYM 120 (370)
T ss_pred CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEE
Confidence 3467888899999999999999885 78999999864322 223457899999999999999999998854 4789
Q ss_pred eeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeecc
Q 003703 526 VYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVT 605 (801)
Q Consensus 526 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~ 605 (801)
||||+++|+|.+++... .++...+..++.||+.||.|||+.+ |+||||||+||||+.++.+||+|||++....
T Consensus 121 v~Ey~~gg~L~~~l~~~----~~~~~~~~~~~~qil~aL~~LH~~~---IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~ 193 (370)
T cd05621 121 VMEYMPGGDLVNLMSNY----DVPEKWAKFYTAEVVLALDAIHSMG---LIHRDVKPDNMLLDKHGHLKLADFGTCMKMD 193 (370)
T ss_pred EEcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCCCCEEEEecccceecc
Confidence 99999999999988543 4778889999999999999999988 9999999999999999999999999998764
Q ss_pred CCCCcCCCccccCCCCCCCCCCCccccccC----CCCcchhHHhHHHHHHHHHhCCCCCCChhHH--HHHhhcCcccccc
Q 003703 606 EDTLYLPSFHRSTAPKGSFPYADPEYHRTG----VLTPKSDSYSFGLIILQLLTGRLPVGLAGEV--RRAVSCGKLSSIL 679 (801)
Q Consensus 606 ~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~----~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~--~~~~~~g~~~~~~ 679 (801)
.... .......||+.|+|||++.+. .++.++|||||||+||||+||+.||...... ...+.....
T Consensus 194 ~~~~-----~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~---- 264 (370)
T cd05621 194 ETGM-----VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKN---- 264 (370)
T ss_pred cCCc-----eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCc----
Confidence 3221 122456799999999998654 3789999999999999999999999744322 111211110
Q ss_pred CCCCCCCCH--HHHHHHHHHHHHhhhhCCCC--CCCchHHH
Q 003703 680 DPLAGDWPT--FVARRLVDLGLQCCELYGRE--RPDITPSL 716 (801)
Q Consensus 680 d~~~~~~~~--~~~~~l~~Li~~Cl~~dP~~--RPt~~e~l 716 (801)
...+|. ..+..+.+++..|+..++.. ||++.+.+
T Consensus 265 ---~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l 302 (370)
T cd05621 265 ---SLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIK 302 (370)
T ss_pred ---ccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHh
Confidence 011222 24667888999999755443 77877443
No 181
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=1.8e-35 Score=320.60 Aligned_cols=251 Identities=28% Similarity=0.430 Sum_probs=195.0
Q ss_pred cCccccceeeecCceEEEEEEEC--Ce--EEEEEEeccCCc-ccHHHHHHHHHHHhcC-CCCceeeEeccccC--Cccee
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GR--TVAIKMLYSHNM-QGQLEFQQEVRVLSKL-QHPHLVTLLGACPE--AWSLV 526 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~--~vAiK~l~~~~~-~~~~~f~~E~~il~~l-~HpnIV~l~g~~~~--~~~LV 526 (801)
++|.....||+|+||.||+|.+. |. .+|+|.+..... .....|.+|+.++.++ +||||++++++|.+ ..++|
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv 86 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 86 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEE
Confidence 46777789999999999999874 44 468887764322 3345688999999999 89999999999854 47899
Q ss_pred eecCCCCchhhhhhhcCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCe
Q 003703 527 YEYLPNGSLQDRLFRKSN-------------VSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSS 593 (801)
Q Consensus 527 ~E~~~~gsL~~~L~~~~~-------------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~v 593 (801)
|||+++|+|.+++..... ...+++..++.++.|++.||.|||+.+ |+||||||+|||++.++.+
T Consensus 87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g---i~H~dlkp~Nili~~~~~~ 163 (303)
T cd05088 87 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVA 163 (303)
T ss_pred EEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchheEEecCCCcE
Confidence 999999999999875431 235889999999999999999999987 9999999999999999999
Q ss_pred eeecccceeeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChhH--HHHHh
Q 003703 594 KICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAV 670 (801)
Q Consensus 594 KL~DFGla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~~--~~~~~ 670 (801)
||+|||+++...... ......+++.|+|||++.+..++.++|||||||++|||+| |..||..... ....+
T Consensus 164 kl~dfg~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~ 236 (303)
T cd05088 164 KIADFGLSRGQEVYV-------KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL 236 (303)
T ss_pred EeCccccCcccchhh-------hcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHH
Confidence 999999986432111 1122335678999999988889999999999999999998 9999964322 11111
Q ss_pred hcCccccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHHhh
Q 003703 671 SCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLH 724 (801)
Q Consensus 671 ~~g~~~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~l~ 724 (801)
..+ .....+...+..+.+|+.+||+.+|.+||++. .++..|..+.
T Consensus 237 ~~~--------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~-~il~~l~~~~ 281 (303)
T cd05088 237 PQG--------YRLEKPLNCDDEVYDLMRQCWREKPYERPSFA-QILVSLNRML 281 (303)
T ss_pred hcC--------CcCCCCCCCCHHHHHHHHHHcCCChhhCcCHH-HHHHHHHHHH
Confidence 111 01112223456789999999999999999999 5666666553
No 182
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=4e-35 Score=309.86 Aligned_cols=246 Identities=28% Similarity=0.488 Sum_probs=190.6
Q ss_pred eeeecCceEEEEEEEC-----CeEEEEEEeccCC-cccHHHHHHHHHHHhcCCCCceeeEecccc--C-CcceeeecCCC
Q 003703 462 KVGQGGFGCVYKGEML-----GRTVAIKMLYSHN-MQGQLEFQQEVRVLSKLQHPHLVTLLGACP--E-AWSLVYEYLPN 532 (801)
Q Consensus 462 ~LG~G~fG~Vy~g~~~-----g~~vAiK~l~~~~-~~~~~~f~~E~~il~~l~HpnIV~l~g~~~--~-~~~LV~E~~~~ 532 (801)
.||+|+||.||+|.+. +..||||.+.... ......+.+|+.+++.++||||++++++|. + ..++||||+++
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~ 81 (262)
T cd05058 2 VIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMKH 81 (262)
T ss_pred cccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCCC
Confidence 5899999999999863 3579999985432 233457889999999999999999999763 2 36899999999
Q ss_pred CchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCC
Q 003703 533 GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLP 612 (801)
Q Consensus 533 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~ 612 (801)
|+|.+++.... ..+++..++.++.+++.||.|||+.+ |+||||||+|||++.++.+||+|||+++..........
T Consensus 82 ~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~ 156 (262)
T cd05058 82 GDLRNFIRSET--HNPTVKDLIGFGLQVAKGMEYLASKK---FVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSV 156 (262)
T ss_pred CCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccCcceEEEcCCCcEEECCccccccccCCcceee
Confidence 99999986543 34677888999999999999999987 99999999999999999999999999986543221110
Q ss_pred CccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhC-CCCCCChhH--HHHHhhcCccccccCCCCCCCCHH
Q 003703 613 SFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTG-RLPVGLAGE--VRRAVSCGKLSSILDPLAGDWPTF 689 (801)
Q Consensus 613 ~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG-~~Pf~~~~~--~~~~~~~g~~~~~~d~~~~~~~~~ 689 (801)
.......+++.|+|||++.+..++.++|||||||++|||++| .+||..... ....+..+.. ...+..
T Consensus 157 --~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~ 226 (262)
T cd05058 157 --HNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGRR--------LLQPEY 226 (262)
T ss_pred --cccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCC--------CCCCCc
Confidence 112344567889999999888999999999999999999995 566653222 2222222211 111222
Q ss_pred HHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHHh
Q 003703 690 VARRLVDLGLQCCELYGRERPDITPSLVKELEQL 723 (801)
Q Consensus 690 ~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~l 723 (801)
.+..+.+++.+||..+|.+||++. +++..|+.+
T Consensus 227 ~~~~~~~li~~cl~~~p~~Rp~~~-~il~~l~~~ 259 (262)
T cd05058 227 CPDPLYEVMLSCWHPKPEMRPTFS-ELVSRIEQI 259 (262)
T ss_pred CCHHHHHHHHHHcCCChhhCCCHH-HHHHHHHHH
Confidence 346789999999999999999998 677777754
No 183
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=9.1e-36 Score=342.64 Aligned_cols=254 Identities=22% Similarity=0.306 Sum_probs=188.8
Q ss_pred HHHHHhcCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCC------CceeeEecccc
Q 003703 449 DLQTATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQH------PHLVTLLGACP 520 (801)
Q Consensus 449 el~~at~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~H------pnIV~l~g~~~ 520 (801)
++...+++|...++||+|+||.||+|.+. +..||||+++... .....+..|+.++..++| +++++++++|.
T Consensus 123 ~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~ 201 (467)
T PTZ00284 123 DIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQ 201 (467)
T ss_pred ccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEE
Confidence 34455788999999999999999999874 7889999986432 223345667777776654 45888888874
Q ss_pred C---CcceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCceeeCCCCCCCeeecCCC-----
Q 003703 521 E---AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSS-KPEKIVHGDLKPQNILLDSEL----- 591 (801)
Q Consensus 521 ~---~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~-~~~~iiHrDIKp~NILLd~~~----- 591 (801)
. ..++||+++ +++|.+++... ..+++..+..|+.||+.||.|||+. + ||||||||+||||+.++
T Consensus 202 ~~~~~~~iv~~~~-g~~l~~~l~~~---~~l~~~~~~~i~~qi~~aL~yLH~~~g---IiHrDlKP~NILl~~~~~~~~~ 274 (467)
T PTZ00284 202 NETGHMCIVMPKY-GPCLLDWIMKH---GPFSHRHLAQIIFQTGVALDYFHTELH---LMHTDLKPENILMETSDTVVDP 274 (467)
T ss_pred cCCceEEEEEecc-CCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHEEEecCCccccc
Confidence 3 468899988 78888888654 3688999999999999999999984 6 99999999999998765
Q ss_pred -----------CeeeecccceeeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCC
Q 003703 592 -----------SSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPV 660 (801)
Q Consensus 592 -----------~vKL~DFGla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf 660 (801)
.+||+|||++..... ......||+.|+|||++.+..|+.++|||||||+||||+||++||
T Consensus 275 ~~~~~~~~~~~~vkl~DfG~~~~~~~---------~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf 345 (467)
T PTZ00284 275 VTNRALPPDPCRVRICDLGGCCDERH---------SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLY 345 (467)
T ss_pred ccccccCCCCceEEECCCCccccCcc---------ccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence 499999998754321 234567999999999999999999999999999999999999999
Q ss_pred CChhHHHHH--hh--cCccc-------------ccc----------CCC-----C--CCC-CHHHHHHHHHHHHHhhhhC
Q 003703 661 GLAGEVRRA--VS--CGKLS-------------SIL----------DPL-----A--GDW-PTFVARRLVDLGLQCCELY 705 (801)
Q Consensus 661 ~~~~~~~~~--~~--~g~~~-------------~~~----------d~~-----~--~~~-~~~~~~~l~~Li~~Cl~~d 705 (801)
......... +. .|.+. .++ ++. . ..+ .......+.+|+.+||+.|
T Consensus 346 ~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~d 425 (467)
T PTZ00284 346 DTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYD 425 (467)
T ss_pred CCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcC
Confidence 643322110 00 01100 000 000 0 000 0012346789999999999
Q ss_pred CCCCCCchHHHHHH
Q 003703 706 GRERPDITPSLVKE 719 (801)
Q Consensus 706 P~~RPt~~e~l~~~ 719 (801)
|.+|||+.+.+.+.
T Consensus 426 P~~R~ta~e~L~Hp 439 (467)
T PTZ00284 426 RQKRLNARQMTTHP 439 (467)
T ss_pred hhhCCCHHHHhcCc
Confidence 99999999655443
No 184
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=3.1e-35 Score=318.77 Aligned_cols=252 Identities=27% Similarity=0.420 Sum_probs=200.4
Q ss_pred hcCccccceeeecCceEEEEEEEC-------CeEEEEEEeccCCc-ccHHHHHHHHHHHhcC-CCCceeeEecccc--CC
Q 003703 454 TCNFSESFKVGQGGFGCVYKGEML-------GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKL-QHPHLVTLLGACP--EA 522 (801)
Q Consensus 454 t~~f~~~~~LG~G~fG~Vy~g~~~-------g~~vAiK~l~~~~~-~~~~~f~~E~~il~~l-~HpnIV~l~g~~~--~~ 522 (801)
.++|...+.||+|+||.||++... +..||+|+++.... .....+.+|+.++.++ +||||++++++|. +.
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 113 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGP 113 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCc
Confidence 357888899999999999999752 45799999875533 2345688999999999 7999999999884 34
Q ss_pred cceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeeccccee
Q 003703 523 WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR 602 (801)
Q Consensus 523 ~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~ 602 (801)
.++||||+++|+|.+++..... ..+++..+..|+.+++.||.|||+.+ |+|+||||+|||++.++.+||+|||+++
T Consensus 114 ~~lv~e~~~~~~L~~~i~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~l~dfg~~~ 189 (302)
T cd05055 114 ILVITEYCCYGDLLNFLRRKRE-SFLTLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNVLLTHGKIVKICDFGLAR 189 (302)
T ss_pred eEEEEEcCCCCcHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eehhhhccceEEEcCCCeEEECCCcccc
Confidence 7899999999999999875432 34899999999999999999999987 9999999999999999999999999998
Q ss_pred eccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChhH---HHHHhhcCccccc
Q 003703 603 LVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE---VRRAVSCGKLSSI 678 (801)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~~---~~~~~~~g~~~~~ 678 (801)
........ .......+++.|+|||++....++.++|||||||++|||+| |..||..... ....+..+..
T Consensus 190 ~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~~--- 262 (302)
T cd05055 190 DIMNDSNY----VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYR--- 262 (302)
T ss_pred cccCCCce----eecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCCc---
Confidence 66433211 11223456788999999999999999999999999999998 9999864321 2222222211
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHH
Q 003703 679 LDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQ 722 (801)
Q Consensus 679 ~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~ 722 (801)
...+...+..+.+++.+||+.+|.+||++. +++..|+.
T Consensus 263 -----~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~-ell~~l~~ 300 (302)
T cd05055 263 -----MAQPEHAPAEIYDIMKTCWDADPLKRPTFK-QIVQLIGK 300 (302)
T ss_pred -----CCCCCCCCHHHHHHHHHHcCCCchhCcCHH-HHHHHHHh
Confidence 011222456899999999999999999999 67777764
No 185
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=1.7e-35 Score=316.56 Aligned_cols=243 Identities=26% Similarity=0.381 Sum_probs=189.3
Q ss_pred CccccceeeecCceEEEEEEEC--CeEEEEEEeccCC-cccHHHHHHHHHHHhcCCCCceeeEecccc--CCcceeeecC
Q 003703 456 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHN-MQGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYL 530 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~-~~~~~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~LV~E~~ 530 (801)
+|...++||+|+||.||+|.+. +..||+|++.... ......|.+|+.++.+++||||++++++|. +..++||||+
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 81 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFM 81 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecC
Confidence 5667788999999999999874 7899999986543 233456889999999999999999999884 4578999999
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCc
Q 003703 531 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLY 610 (801)
Q Consensus 531 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~ 610 (801)
++|+|..+. .+++..+..++.|++.||.|||+.+ |+|+||||+|||++.++.++|+|||++.......
T Consensus 82 ~~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~-- 149 (279)
T cd06619 82 DGGSLDVYR-------KIPEHVLGRIAVAVVKGLTYLWSLK---ILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSI-- 149 (279)
T ss_pred CCCChHHhh-------cCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCCHHHEEECCCCCEEEeeCCcceeccccc--
Confidence 999996542 4678889999999999999999987 9999999999999999999999999998664321
Q ss_pred CCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHH-hhcCccccccCCCCCCC-CH
Q 003703 611 LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRA-VSCGKLSSILDPLAGDW-PT 688 (801)
Q Consensus 611 ~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~-~~~g~~~~~~d~~~~~~-~~ 688 (801)
.....||..|+|||++.+..++.++|||||||++|+|++|+.||......... ...+....+.+...... ..
T Consensus 150 ------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (279)
T cd06619 150 ------AKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVG 223 (279)
T ss_pred ------ccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCC
Confidence 23457999999999999989999999999999999999999999632110000 00000000011111111 11
Q ss_pred HHHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 689 FVARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 689 ~~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
..+..+.+++.+|++.+|..||++.+.+
T Consensus 224 ~~~~~~~~li~~~l~~~P~~Rp~~~eil 251 (279)
T cd06619 224 QFSEKFVHFITQCMRKQPKERPAPENLM 251 (279)
T ss_pred cCCHHHHHHHHHHhhCChhhCCCHHHHh
Confidence 2445789999999999999999998533
No 186
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=5.2e-35 Score=314.78 Aligned_cols=245 Identities=23% Similarity=0.322 Sum_probs=195.6
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEecccc--CCcceeeecC
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYL 530 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~LV~E~~ 530 (801)
++|...++||.|+||.||+|+.. +..||+|.+..........+.+|+.+++.++||||++++++|. ...++||||+
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 91 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFC 91 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecC
Confidence 45777788999999999999885 7899999997766555667889999999999999999999873 4578999999
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCc
Q 003703 531 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLY 610 (801)
Q Consensus 531 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~ 610 (801)
++++|..++.... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 92 ~~~~l~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~-- 164 (292)
T cd06644 92 PGGAVDAIMLELD--RGLTEPQIQVICRQMLEALQYLHSMK---IIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTL-- 164 (292)
T ss_pred CCCcHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhcCC---eeecCCCcceEEEcCCCCEEEccCccceeccccc--
Confidence 9999988775543 35899999999999999999999987 9999999999999999999999999987643221
Q ss_pred CCCccccCCCCCCCCCCCccccc-----cCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHH--hhcCccccccCCCC
Q 003703 611 LPSFHRSTAPKGSFPYADPEYHR-----TGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRA--VSCGKLSSILDPLA 683 (801)
Q Consensus 611 ~~~~~~~~~~~Gt~~Y~APE~~~-----~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~--~~~g~~~~~~d~~~ 683 (801)
.......|++.|+|||++. ...++.++|||||||++|||++|.+||......... +..+....
T Consensus 165 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~------ 234 (292)
T cd06644 165 ----QRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPT------ 234 (292)
T ss_pred ----cccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCCCcc------
Confidence 1223456889999999884 345788999999999999999999999654332211 11111111
Q ss_pred CCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 684 GDWPTFVARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 684 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
...+...+..+.+++.+||..+|.+||++.+.+
T Consensus 235 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il 267 (292)
T cd06644 235 LSQPSKWSMEFRDFLKTALDKHPETRPSAAQLL 267 (292)
T ss_pred CCCCcccCHHHHHHHHHHhcCCcccCcCHHHHh
Confidence 011233456789999999999999999998433
No 187
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=5e-35 Score=316.23 Aligned_cols=249 Identities=24% Similarity=0.379 Sum_probs=203.0
Q ss_pred cCccccceeeecCceEEEEEEE--CCeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEecccc--CCcceeeecC
Q 003703 455 CNFSESFKVGQGGFGCVYKGEM--LGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYL 530 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~--~g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~LV~E~~ 530 (801)
.+|.....||.|+||.||+|.. .|..||+|.+..........+.+|+.+++.++||||++++++|. +..++||||+
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 98 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL 98 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence 4688888999999999999986 48999999987665555667889999999999999999999884 3578999999
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCc
Q 003703 531 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLY 610 (801)
Q Consensus 531 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~ 610 (801)
++++|..++.. ..+++..+..++.+++.||.|||+.+ ++|+||||+||+++.++.+||+|||++........
T Consensus 99 ~~~~L~~~~~~----~~l~~~~~~~i~~~l~~al~~LH~~~---i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~- 170 (296)
T cd06655 99 AGGSLTDVVTE----TCMDEAQIAAVCRECLQALEFLHANQ---VIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS- 170 (296)
T ss_pred CCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccCccchhcccccc-
Confidence 99999998854 25889999999999999999999988 99999999999999999999999999886543321
Q ss_pred CCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHh--hcCccccccCCCCCCCCH
Q 003703 611 LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAV--SCGKLSSILDPLAGDWPT 688 (801)
Q Consensus 611 ~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~--~~g~~~~~~d~~~~~~~~ 688 (801)
......|++.|+|||.+.+..++.++|||||||++|+|++|+.||.......... ....... ...+.
T Consensus 171 -----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~~------~~~~~ 239 (296)
T cd06655 171 -----KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPE------LQNPE 239 (296)
T ss_pred -----cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCcc------cCCcc
Confidence 1234468999999999998889999999999999999999999997654432221 1111111 11223
Q ss_pred HHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHH
Q 003703 689 FVARRLVDLGLQCCELYGRERPDITPSLVKELEQ 722 (801)
Q Consensus 689 ~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~ 722 (801)
..+..+.+++.+||..+|.+||++.+.+.+.+-.
T Consensus 240 ~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~ 273 (296)
T cd06655 240 KLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLK 273 (296)
T ss_pred cCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhh
Confidence 3456788999999999999999999766655543
No 188
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=2.6e-35 Score=310.25 Aligned_cols=243 Identities=28% Similarity=0.444 Sum_probs=197.4
Q ss_pred cCccccceeeecCceEEEEEEECCeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEecccc-CCcceeeecCCCC
Q 003703 455 CNFSESFKVGQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP-EAWSLVYEYLPNG 533 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~-~~~~LV~E~~~~g 533 (801)
.+|...+.||+|+||.||+|...+..||+|.+.... ....+.+|+.++..++||||+++++++. +..++||||+++|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~v~e~~~~~ 83 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEYTGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHNGLYIVMELMSKG 83 (254)
T ss_pred HHceeeeeeccCCCCceEecccCCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCCCcEEEEECCCCC
Confidence 347777899999999999999899999999986532 2356889999999999999999999884 4578999999999
Q ss_pred chhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCCC
Q 003703 534 SLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPS 613 (801)
Q Consensus 534 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~~ 613 (801)
+|.+++.... ...+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++......
T Consensus 84 ~L~~~l~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~---~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~----- 154 (254)
T cd05083 84 NLVNFLRTRG-RALVSVIQLLQFSLDVAEGMEYLESKK---LVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV----- 154 (254)
T ss_pred CHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccCcceEEEcCCCcEEECCCccceeccccC-----
Confidence 9999987653 245889999999999999999999987 9999999999999999999999999987643221
Q ss_pred ccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChhH--HHHHhhcCccccccCCCCCCCCHHH
Q 003703 614 FHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWPTFV 690 (801)
Q Consensus 614 ~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~~--~~~~~~~g~~~~~~d~~~~~~~~~~ 690 (801)
....++..|+|||++.++.++.++|||||||++|+|++ |++||..... ....+..+... ..+...
T Consensus 155 ----~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~--------~~~~~~ 222 (254)
T cd05083 155 ----DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGYRM--------EPPEGC 222 (254)
T ss_pred ----CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCCCC--------CCCCcC
Confidence 12234578999999998899999999999999999998 9999964332 23333332111 112234
Q ss_pred HHHHHHHHHHhhhhCCCCCCCchHHHHHHHH
Q 003703 691 ARRLVDLGLQCCELYGRERPDITPSLVKELE 721 (801)
Q Consensus 691 ~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~ 721 (801)
+..+.+++.+||+.+|..||++. .+...|+
T Consensus 223 ~~~~~~li~~~l~~~p~~Rp~~~-~l~~~l~ 252 (254)
T cd05083 223 PADVYVLMTSCWETEPKKRPSFH-KLREKLE 252 (254)
T ss_pred CHHHHHHHHHHcCCChhhCcCHH-HHHHHHc
Confidence 56788999999999999999998 5665554
No 189
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=1.7e-35 Score=328.10 Aligned_cols=250 Identities=22% Similarity=0.247 Sum_probs=192.4
Q ss_pred HhcCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEeccccC-------
Q 003703 453 ATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACPE------- 521 (801)
Q Consensus 453 at~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~--~~~~~f~~E~~il~~l~HpnIV~l~g~~~~------- 521 (801)
..++|...+.||+|+||.||++... +..||||++..... .....+.+|+.++..++||||+++++++..
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 4568999999999999999999874 88999999875432 233467789999999999999999998732
Q ss_pred -CcceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccc
Q 003703 522 -AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGI 600 (801)
Q Consensus 522 -~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGl 600 (801)
..++||||+++ +|.+.+.. .+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 95 ~~~~lv~e~~~~-~l~~~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDikp~Nill~~~~~~kl~Dfg~ 165 (355)
T cd07874 95 QDVYLVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 165 (355)
T ss_pred ceeEEEhhhhcc-cHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEECCCCCEEEeeCcc
Confidence 25899999965 56665532 4788889999999999999999988 99999999999999999999999999
Q ss_pred eeeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHH---hh------
Q 003703 601 CRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRA---VS------ 671 (801)
Q Consensus 601 a~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~---~~------ 671 (801)
++...... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||...+..... +.
T Consensus 166 ~~~~~~~~-------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 238 (355)
T cd07874 166 ARTAGTSF-------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 238 (355)
T ss_pred cccCCCcc-------ccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 98654322 123457899999999999999999999999999999999999999643321110 00
Q ss_pred ----------------c-Ccccccc------C---CCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHH
Q 003703 672 ----------------C-GKLSSIL------D---PLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVK 718 (801)
Q Consensus 672 ----------------~-g~~~~~~------d---~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~ 718 (801)
. .....+. + +.....+...+..+.+|+.+|+..||.+|||+.+.+.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 239 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred HHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 0 0000000 0 00011222235678999999999999999999965544
No 190
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=3.1e-35 Score=314.68 Aligned_cols=249 Identities=23% Similarity=0.283 Sum_probs=191.3
Q ss_pred CccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEecccc--CCcceeeec
Q 003703 456 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEY 529 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~--~~~~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~LV~E~ 529 (801)
+|...+.||+|+||.||+|... |..||||.+..... .....+.+|+.++..++||||+++++++. ...++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 4677789999999999999884 88999999865432 22356889999999999999999999984 457899999
Q ss_pred CCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCC
Q 003703 530 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTL 609 (801)
Q Consensus 530 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~ 609 (801)
++ ++|.+++........+++..+..++.||+.||.|||+.+ |+|+||||+|||++.++.+||+|||++.......
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~- 155 (285)
T cd07861 81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRR---VLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV- 155 (285)
T ss_pred CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCCHHHEEEcCCCcEEECcccceeecCCCc-
Confidence 97 688888765444457899999999999999999999987 9999999999999999999999999998654322
Q ss_pred cCCCccccCCCCCCCCCCCcccccc-CCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhhc----Ccc---------
Q 003703 610 YLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSC----GKL--------- 675 (801)
Q Consensus 610 ~~~~~~~~~~~~Gt~~Y~APE~~~~-~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~----g~~--------- 675 (801)
.......|++.|+|||++.+ ..++.++|||||||++|+|+||++||............ +..
T Consensus 156 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (285)
T cd07861 156 -----RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVT 230 (285)
T ss_pred -----ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcch
Confidence 11234467899999998765 45789999999999999999999999643322111100 000
Q ss_pred -----ccccC----CCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchH
Q 003703 676 -----SSILD----PLAGDWPTFVARRLVDLGLQCCELYGRERPDITP 714 (801)
Q Consensus 676 -----~~~~d----~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e 714 (801)
...+. ..........+.++.+++.+||+.||.+|||+.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ 278 (285)
T cd07861 231 SLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKK 278 (285)
T ss_pred hhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHH
Confidence 00000 0000111124567889999999999999999984
No 191
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-35 Score=326.14 Aligned_cols=246 Identities=29% Similarity=0.444 Sum_probs=209.6
Q ss_pred HhcCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcccH---HHHHHHHHHHhcCC-CCceeeEeccccC--Ccc
Q 003703 453 ATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQ---LEFQQEVRVLSKLQ-HPHLVTLLGACPE--AWS 524 (801)
Q Consensus 453 at~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~~---~~f~~E~~il~~l~-HpnIV~l~g~~~~--~~~ 524 (801)
....|.....||.|.||.||+++.. |+.+|+|.+.+...... ..+.+|+.+|.++. |||||.++++|.+ ..+
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~ 112 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY 112 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence 3456777789999999999999885 89999999988766443 47899999999998 9999999999954 578
Q ss_pred eeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCC----CCeeeecccc
Q 003703 525 LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSE----LSSKICDFGI 600 (801)
Q Consensus 525 LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~----~~vKL~DFGl 600 (801)
+|||++.||.|.+.+... .++...+..++.|++.++.|||+.+ |+||||||+|+|+... +.+|++|||+
T Consensus 113 lvmEL~~GGeLfd~i~~~----~~sE~da~~~~~~il~av~~lH~~g---vvHrDlKpEN~L~~~~~~~~~~ik~~DFGl 185 (382)
T KOG0032|consen 113 LVMELCEGGELFDRIVKK----HYSERDAAGIIRQILEAVKYLHSLG---VVHRDLKPENLLLASKDEGSGRIKLIDFGL 185 (382)
T ss_pred EEEEecCCchHHHHHHHc----cCCHHHHHHHHHHHHHHHHHHHhCC---ceeccCCHHHeeeccccCCCCcEEEeeCCC
Confidence 999999999999999876 2888999999999999999999988 9999999999999643 5799999999
Q ss_pred eeeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChh--HHHHHhhcCccccc
Q 003703 601 CRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAG--EVRRAVSCGKLSSI 678 (801)
Q Consensus 601 a~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~--~~~~~~~~g~~~~~ 678 (801)
+....... .....+||+.|+|||++....|+..+||||+||++|.|++|.+||.... .....+..|++
T Consensus 186 a~~~~~~~-------~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~--- 255 (382)
T KOG0032|consen 186 AKFIKPGE-------RLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDF--- 255 (382)
T ss_pred ceEccCCc-------eEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCC---
Confidence 99886522 3467899999999999999999999999999999999999999997555 34445556655
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHH
Q 003703 679 LDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLV 717 (801)
Q Consensus 679 ~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~ 717 (801)
+.....|+. .+..+.+++..|+..||..|+++.+.+.
T Consensus 256 -~f~~~~w~~-is~~akd~i~~ll~~dp~~R~ta~~~L~ 292 (382)
T KOG0032|consen 256 -DFTSEPWDD-ISESAKDFIRKLLEFDPRKRLTAAQALQ 292 (382)
T ss_pred -CCCCCCccc-cCHHHHHHHHHhcccCcccCCCHHHHhc
Confidence 223344554 5889999999999999999999985444
No 192
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=2.8e-35 Score=315.61 Aligned_cols=252 Identities=27% Similarity=0.414 Sum_probs=197.8
Q ss_pred cCccccceeeecCceEEEEEEE------CCeEEEEEEeccCC-cccHHHHHHHHHHHhcCCCCceeeEeccccC----Cc
Q 003703 455 CNFSESFKVGQGGFGCVYKGEM------LGRTVAIKMLYSHN-MQGQLEFQQEVRVLSKLQHPHLVTLLGACPE----AW 523 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~------~g~~vAiK~l~~~~-~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~----~~ 523 (801)
..|...+.||+|+||.||++.+ .+..||+|.++... ......+.+|+.+++.++||||++++++|.+ ..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 83 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence 3467788999999999999974 26789999987553 2334568999999999999999999998843 36
Q ss_pred ceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceee
Q 003703 524 SLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRL 603 (801)
Q Consensus 524 ~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~ 603 (801)
++||||+++++|.+++.... ..++|..++.++.+++.||.|||+.+ |+||||||+||+++.++.+||+|||+++.
T Consensus 84 ~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~i~~~i~~aL~~lH~~g---i~H~dlkp~Nil~~~~~~~~l~dfg~~~~ 158 (284)
T cd05079 84 KLIMEFLPSGSLKEYLPRNK--NKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKA 158 (284)
T ss_pred EEEEEccCCCCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccchheEEEcCCCCEEECCCccccc
Confidence 79999999999999986543 35899999999999999999999987 99999999999999999999999999987
Q ss_pred ccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHH-----------------
Q 003703 604 VTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEV----------------- 666 (801)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~----------------- 666 (801)
+....... .......|+..|+|||++.+..++.++|||||||++|||+||+.|+......
T Consensus 159 ~~~~~~~~---~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd05079 159 IETDKEYY---TVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRL 235 (284)
T ss_pred cccCccce---eecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHH
Confidence 65332110 1123455778899999998889999999999999999999988765321110
Q ss_pred HHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHHh
Q 003703 667 RRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 723 (801)
Q Consensus 667 ~~~~~~g~~~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~l 723 (801)
...+..+. ....+...+..+.+|+.+||+.+|.+||++. .++..|+.+
T Consensus 236 ~~~~~~~~--------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~-~il~~l~~~ 283 (284)
T cd05079 236 VRVLEEGK--------RLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQ-NLIEGFEAI 283 (284)
T ss_pred HHHHHcCc--------cCCCCCCCCHHHHHHHHHHccCCcccCcCHH-HHHHHHHhh
Confidence 00111111 0111223567899999999999999999998 677776653
No 193
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=3e-35 Score=317.45 Aligned_cols=259 Identities=26% Similarity=0.404 Sum_probs=195.6
Q ss_pred cCccccceeeecCceEEEEEEEC------------------CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeE
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML------------------GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTL 515 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~------------------g~~vAiK~l~~~~~-~~~~~f~~E~~il~~l~HpnIV~l 515 (801)
++|...++||+|+||.||++... +..||+|++..... .....|.+|+.++..++||||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 46888889999999999998532 34699999875433 334578999999999999999999
Q ss_pred ecccc--CCcceeeecCCCCchhhhhhhcCC--------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCe
Q 003703 516 LGACP--EAWSLVYEYLPNGSLQDRLFRKSN--------VSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNI 585 (801)
Q Consensus 516 ~g~~~--~~~~LV~E~~~~gsL~~~L~~~~~--------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NI 585 (801)
++++. +..++||||+++|+|.+++..... ...+++...+.++.|++.||.|||+.+ |+||||||+||
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dlkp~Ni 161 (296)
T cd05095 85 LAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLN---FVHRDLATRNC 161 (296)
T ss_pred EEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCC---eecccCChheE
Confidence 99884 457899999999999999876431 134788899999999999999999987 99999999999
Q ss_pred eecCCCCeeeecccceeeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh--CCCCCCCh
Q 003703 586 LLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT--GRLPVGLA 663 (801)
Q Consensus 586 LLd~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt--G~~Pf~~~ 663 (801)
|++.++.++|+|||+++.+...... .......+++.|++||+...+.++.++|||||||++|||+| |..||...
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~~~----~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~ 237 (296)
T cd05095 162 LVGKNYTIKIADFGMSRNLYSGDYY----RIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQL 237 (296)
T ss_pred EEcCCCCEEeccCcccccccCCcce----eccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCcccc
Confidence 9999999999999999866433211 11223345678999999888899999999999999999998 77888633
Q ss_pred hHHHHHhhcCcccccc-CCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHH
Q 003703 664 GEVRRAVSCGKLSSIL-DPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELE 721 (801)
Q Consensus 664 ~~~~~~~~~g~~~~~~-d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~ 721 (801)
.........+...... .......+...+..+.+|+.+||+.||.+||++. ++.+.|+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~-~i~~~l~ 295 (296)
T cd05095 238 SDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQ-EIHATLL 295 (296)
T ss_pred ChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHH-HHHHHHh
Confidence 2211110001000000 0000011222446889999999999999999999 6666654
No 194
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=3.3e-35 Score=308.93 Aligned_cols=245 Identities=27% Similarity=0.360 Sum_probs=199.3
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccccC--CcceeeecC
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYL 530 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E~~ 530 (801)
++|.....||.|+||.||+|... +..|++|.+..... ...+.+|+.++++++||||+++++++.+ ..++++||+
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~ 80 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYC 80 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecC
Confidence 56788889999999999999886 68999999865433 5679999999999999999999998844 478999999
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCc
Q 003703 531 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLY 610 (801)
Q Consensus 531 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~ 610 (801)
++++|.+++.... ..+++..+..++.+++.||.|||+.+ ++|+||+|+||+++.++.+||+|||++........
T Consensus 81 ~~~~L~~~l~~~~--~~l~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~- 154 (256)
T cd06612 81 GAGSVSDIMKITN--KTLTEEEIAAILYQTLKGLEYLHSNK---KIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA- 154 (256)
T ss_pred CCCcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEECCCCcEEEcccccchhcccCcc-
Confidence 9999999986543 46899999999999999999999987 99999999999999999999999999987654321
Q ss_pred CCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhhcCccccccCCCCCCCCHHH
Q 003703 611 LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFV 690 (801)
Q Consensus 611 ~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~g~~~~~~d~~~~~~~~~~ 690 (801)
......|+..|+|||++.+..++.++|||||||++|+|++|++||................ ......+...
T Consensus 155 -----~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 225 (256)
T cd06612 155 -----KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKP----PPTLSDPEKW 225 (256)
T ss_pred -----ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccCC----CCCCCchhhc
Confidence 1234458899999999998899999999999999999999999997544332221111100 0011123345
Q ss_pred HHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 691 ARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 691 ~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
...+.+++.+||+.+|.+||++.+.+
T Consensus 226 ~~~~~~~i~~~l~~~P~~Rps~~~il 251 (256)
T cd06612 226 SPEFNDFVKKCLVKDPEERPSAIQLL 251 (256)
T ss_pred CHHHHHHHHHHHhcChhhCcCHHHHh
Confidence 56899999999999999999998543
No 195
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=4.7e-35 Score=311.20 Aligned_cols=247 Identities=27% Similarity=0.379 Sum_probs=186.8
Q ss_pred eeeecCceEEEEEEEC----CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEeccccC--CcceeeecCCCCc
Q 003703 462 KVGQGGFGCVYKGEML----GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYLPNGS 534 (801)
Q Consensus 462 ~LG~G~fG~Vy~g~~~----g~~vAiK~l~~~~~-~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E~~~~gs 534 (801)
.||+|+||.||+|... +..+|+|.+..... .....|.+|+.++.+++||||++++|+|.+ ..++||||+++|+
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGD 81 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCc
Confidence 5899999999999764 45799998866543 334568899999999999999999999854 4789999999999
Q ss_pred hhhhhhhcCC--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCC
Q 003703 535 LQDRLFRKSN--VSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLP 612 (801)
Q Consensus 535 L~~~L~~~~~--~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~ 612 (801)
|.+++..... ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++........
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~-- 156 (269)
T cd05087 82 LKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN---FIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYY-- 156 (269)
T ss_pred HHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC---EeccccCcceEEEcCCCcEEECCccccccccCccee--
Confidence 9999875432 234677888899999999999999987 999999999999999999999999998764332211
Q ss_pred CccccCCCCCCCCCCCccccccC-------CCCcchhHHhHHHHHHHHHh-CCCCCCChhHHHH--HhhcCccccccCCC
Q 003703 613 SFHRSTAPKGSFPYADPEYHRTG-------VLTPKSDSYSFGLIILQLLT-GRLPVGLAGEVRR--AVSCGKLSSILDPL 682 (801)
Q Consensus 613 ~~~~~~~~~Gt~~Y~APE~~~~~-------~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~~--~~~~g~~~~~~d~~ 682 (801)
.......|++.|+|||++... .++.++|||||||++|||++ |..||........ ....+....+.++.
T Consensus 157 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (269)
T cd05087 157 --VTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPR 234 (269)
T ss_pred --ecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCc
Confidence 112345678899999987532 35889999999999999996 9999964332211 11111112222221
Q ss_pred CCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHH
Q 003703 683 AGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKEL 720 (801)
Q Consensus 683 ~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L 720 (801)
.....+..+.+++..|+ .+|.+||++. +|...|
T Consensus 235 ---~~~~~~~~~~~l~~~c~-~~P~~Rpt~~-~l~~~l 267 (269)
T cd05087 235 ---LKLPLSDRWYEVMQFCW-LQPEQRPSAE-EVHLLL 267 (269)
T ss_pred ---cCCCCChHHHHHHHHHh-cCcccCCCHH-HHHHHh
Confidence 11123456788999998 6899999999 555544
No 196
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=1e-35 Score=330.59 Aligned_cols=246 Identities=24% Similarity=0.339 Sum_probs=190.0
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccceee
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVY 527 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~---~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~ 527 (801)
++|...+.||+|+||.||++... |..||||++..... .....+.+|+.++..++||||+++++++.+ ..+|||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 36788889999999999999885 78999999965322 223457889999999999999999998854 478999
Q ss_pred ecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCC
Q 003703 528 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 607 (801)
Q Consensus 528 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~ 607 (801)
||+++|+|.+++.... .+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.+...
T Consensus 81 E~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~~L~~lH~~g---ivHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~ 154 (360)
T cd05627 81 EFLPGGDMMTLLMKKD---TLSEEATQFYIAETVLAIDAIHQLG---FIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKA 154 (360)
T ss_pred eCCCCccHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCCCCEEEeeccCCcccccc
Confidence 9999999999986543 5788999999999999999999988 999999999999999999999999998755321
Q ss_pred CCcC-----------------------------CCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCC
Q 003703 608 TLYL-----------------------------PSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRL 658 (801)
Q Consensus 608 ~~~~-----------------------------~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~ 658 (801)
.... .........+||+.|+|||++.+..++.++|||||||++|||+||++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~ 234 (360)
T cd05627 155 HRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYP 234 (360)
T ss_pred cccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCC
Confidence 1000 00001224579999999999999999999999999999999999999
Q ss_pred CCCChhH--HHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCc
Q 003703 659 PVGLAGE--VRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDI 712 (801)
Q Consensus 659 Pf~~~~~--~~~~~~~g~~~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~ 712 (801)
||..... ....+..... .+.-+.. ...+..+.+|+.+|+. ||.+|++.
T Consensus 235 Pf~~~~~~~~~~~i~~~~~-~~~~p~~----~~~s~~~~~li~~l~~-~p~~R~~~ 284 (360)
T cd05627 235 PFCSETPQETYRKVMNWKE-TLVFPPE----VPISEKAKDLILRFCT-DSENRIGS 284 (360)
T ss_pred CCCCCCHHHHHHHHHcCCC-ceecCCC----CCCCHHHHHHHHHhcc-ChhhcCCC
Confidence 9964432 2222221110 0000100 1134577888888774 99999975
No 197
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=3.4e-35 Score=312.10 Aligned_cols=252 Identities=27% Similarity=0.430 Sum_probs=196.6
Q ss_pred CccccceeeecCceEEEEEEEC--C---eEEEEEEeccCC-cccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccceee
Q 003703 456 NFSESFKVGQGGFGCVYKGEML--G---RTVAIKMLYSHN-MQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVY 527 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~--g---~~vAiK~l~~~~-~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~ 527 (801)
+|...+.||+|+||.||+|.+. + ..||||.+.... ......|..|+.++..++||||+++++++.+ ..++||
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 84 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIIT 84 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEE
Confidence 4566788999999999999875 3 369999987543 2334579999999999999999999998844 468999
Q ss_pred ecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCC
Q 003703 528 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 607 (801)
Q Consensus 528 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~ 607 (801)
||+++|+|.+++.... ..+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++......
T Consensus 85 e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~~l~~al~~lH~~g---~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~ 159 (269)
T cd05065 85 EFMENGALDSFLRQND--GQFTVIQLVGMLRGIAAGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDD 159 (269)
T ss_pred ecCCCCcHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccChheEEEcCCCcEEECCCccccccccC
Confidence 9999999999886543 46899999999999999999999987 999999999999999999999999998866433
Q ss_pred CCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChhH--HHHHhhcCccccccCCCCC
Q 003703 608 TLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKLSSILDPLAG 684 (801)
Q Consensus 608 ~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~~--~~~~~~~g~~~~~~d~~~~ 684 (801)
... +.........++..|+|||++.+..++.++|||||||++|||++ |..||..... ....+..+. . .
T Consensus 160 ~~~-~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~~--~------~ 230 (269)
T cd05065 160 TSD-PTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQDY--R------L 230 (269)
T ss_pred ccc-cccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCC--c------C
Confidence 211 11111111122457999999999999999999999999999887 9999964332 222222111 0 0
Q ss_pred CCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHH
Q 003703 685 DWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQ 722 (801)
Q Consensus 685 ~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~ 722 (801)
..+...+..+.+++.+||..+|.+||++. .+...|+.
T Consensus 231 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~-~i~~~l~~ 267 (269)
T cd05065 231 PPPMDCPTALHQLMLDCWQKDRNARPKFG-QIVSTLDK 267 (269)
T ss_pred CCcccCCHHHHHHHHHHcCCChhhCcCHH-HHHHHHHh
Confidence 11223456788999999999999999998 67777764
No 198
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-36 Score=320.24 Aligned_cols=245 Identities=25% Similarity=0.340 Sum_probs=204.2
Q ss_pred cCccccceeeecCceEEEEEEE--CCeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEeccc--cCCcceee
Q 003703 455 CNFSESFKVGQGGFGCVYKGEM--LGRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGAC--PEAWSLVY 527 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~--~g~~vAiK~l~~~~~---~~~~~f~~E~~il~~l~HpnIV~l~g~~--~~~~~LV~ 527 (801)
+.|+.-++||+||||.||-++. +|+-+|+|.+.+... ++.....+|-.+|.+++.+.||.|-.+| .+.+|||+
T Consensus 185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVL 264 (591)
T KOG0986|consen 185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVL 264 (591)
T ss_pred cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEE
Confidence 5678888999999999998866 489999998866543 3334567899999999999999998887 46799999
Q ss_pred ecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCC
Q 003703 528 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 607 (801)
Q Consensus 528 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~ 607 (801)
..|+||+|.-+|...++ +.|+.+.+..++.+|+.||.+||... ||.||+||+|||||+.|+++|+|+|||..+..+
T Consensus 265 tlMNGGDLkfHiyn~g~-~gF~e~ra~FYAAEi~cGLehlH~~~---iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g 340 (591)
T KOG0986|consen 265 TLMNGGDLKFHIYNHGN-PGFDEQRARFYAAEIICGLEHLHRRR---IVYRDLKPENILLDDHGHVRISDLGLAVEIPEG 340 (591)
T ss_pred EeecCCceeEEeeccCC-CCCchHHHHHHHHHHHhhHHHHHhcc---eeeccCChhheeeccCCCeEeeccceEEecCCC
Confidence 99999999999988765 56899999999999999999999988 999999999999999999999999999998766
Q ss_pred CCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhhcCccccccCCCCCCCC
Q 003703 608 TLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWP 687 (801)
Q Consensus 608 ~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~g~~~~~~d~~~~~~~ 687 (801)
. .....+||.+|||||++.+..|+...|+|||||+||||+.|+.||.....- +....+...+-.....++
T Consensus 341 ~-------~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeK---vk~eEvdrr~~~~~~ey~ 410 (591)
T KOG0986|consen 341 K-------PIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEK---VKREEVDRRTLEDPEEYS 410 (591)
T ss_pred C-------ccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhh---hhHHHHHHHHhcchhhcc
Confidence 5 234558999999999999999999999999999999999999999633221 111111111111223567
Q ss_pred HHHHHHHHHHHHHhhhhCCCCCCCch
Q 003703 688 TFVARRLVDLGLQCCELYGRERPDIT 713 (801)
Q Consensus 688 ~~~~~~l~~Li~~Cl~~dP~~RPt~~ 713 (801)
...+++...|....|+.||.+|--.+
T Consensus 411 ~kFS~eakslc~~LL~Kdp~~RLGcr 436 (591)
T KOG0986|consen 411 DKFSEEAKSLCEGLLTKDPEKRLGCR 436 (591)
T ss_pred cccCHHHHHHHHHHHccCHHHhccCC
Confidence 77888899999999999999998776
No 199
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-36 Score=329.44 Aligned_cols=246 Identities=27% Similarity=0.395 Sum_probs=202.7
Q ss_pred eeeecCceEEEEEEEC--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccccCCc--ceeeecCCCCchhh
Q 003703 462 KVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACPEAW--SLVYEYLPNGSLQD 537 (801)
Q Consensus 462 ~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~--~LV~E~~~~gsL~~ 537 (801)
+||+|.||+||.|++. ...+|||-+.........-+..|+.+-+.|+|.|||+++|+|.++. -+.||-+|||||.+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs 661 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS 661 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence 6999999999999986 4567999987766666666889999999999999999999997654 47899999999999
Q ss_pred hhhhcCCCCCC--CHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeec-CCCCeeeecccceeeccCCCCcCCCc
Q 003703 538 RLFRKSNVSPL--LWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLD-SELSSKICDFGICRLVTEDTLYLPSF 614 (801)
Q Consensus 538 ~L~~~~~~~~l--~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd-~~~~vKL~DFGla~~~~~~~~~~~~~ 614 (801)
+|..+= +++ +..+.-.+..||+.||.|||.+. |||||||-+|||++ -.|.+||+|||.++.+..-..
T Consensus 662 LLrskW--GPlKDNEstm~fYtkQILeGLkYLHen~---IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP----- 731 (1226)
T KOG4279|consen 662 LLRSKW--GPLKDNESTMNFYTKQILEGLKYLHENK---IVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINP----- 731 (1226)
T ss_pred HHHhcc--CCCccchhHHHHHHHHHHHHhhhhhhcc---eeeccccCCcEEEeeccceEEecccccchhhccCCc-----
Confidence 996543 345 66777888999999999999988 99999999999996 578999999999987753221
Q ss_pred cccCCCCCCCCCCCccccccC--CCCcchhHHhHHHHHHHHHhCCCCCCChhHHH-HHhhcCccccccCCCCCCCCHHHH
Q 003703 615 HRSTAPKGSFPYADPEYHRTG--VLTPKSDSYSFGLIILQLLTGRLPVGLAGEVR-RAVSCGKLSSILDPLAGDWPTFVA 691 (801)
Q Consensus 615 ~~~~~~~Gt~~Y~APE~~~~~--~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~-~~~~~g~~~~~~d~~~~~~~~~~~ 691 (801)
.+.++.||..|||||++..+ +|+.++|||||||.+.||.||++||-..+... .++.-|.+. .-+..|.+.+
T Consensus 732 -~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyK-----vHP~iPeels 805 (1226)
T KOG4279|consen 732 -CTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYK-----VHPPIPEELS 805 (1226)
T ss_pred -cccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhccee-----cCCCCcHHHH
Confidence 23566799999999999765 69999999999999999999999996444332 233444332 2356788999
Q ss_pred HHHHHHHHHhhhhCCCCCCCchHHHHHHHHHh
Q 003703 692 RRLVDLGLQCCELYGRERPDITPSLVKELEQL 723 (801)
Q Consensus 692 ~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~l 723 (801)
.+...++++|+.++|.+||++.+.+...+-.-
T Consensus 806 aeak~FilrcFepd~~~R~sA~~LL~DpFlq~ 837 (1226)
T KOG4279|consen 806 AEAKNFILRCFEPDPCDRPSAKDLLQDPFLQH 837 (1226)
T ss_pred HHHHHHHHHHcCCCcccCccHHHhccCccccc
Confidence 99999999999999999999997776665443
No 200
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-36 Score=326.90 Aligned_cols=242 Identities=27% Similarity=0.362 Sum_probs=197.4
Q ss_pred CccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcccH---HHHHHHHHHHhcCCCCceeeEecccc--CCcceeee
Q 003703 456 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQ---LEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYE 528 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~~---~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~LV~E 528 (801)
-|...+.||.|+||.||-+++. ...||||.+.....+.. .++..|+..|.+++|||+|.+-|||. ...+||||
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME 106 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME 106 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence 4677778999999999999875 78999999976655433 46889999999999999999999983 34679999
Q ss_pred cCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCC
Q 003703 529 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDT 608 (801)
Q Consensus 529 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~ 608 (801)
|| -||-.|+|.-.. .++-..++.-|+.+.+.||.|||+.+ .||||||..||||.+.|.|||+|||.|....+
T Consensus 107 YC-lGSAsDlleVhk--KplqEvEIAAi~~gaL~gLaYLHS~~---~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P-- 178 (948)
T KOG0577|consen 107 YC-LGSASDLLEVHK--KPLQEVEIAAITHGALQGLAYLHSHN---RIHRDIKAGNILLSEPGLVKLADFGSASIMAP-- 178 (948)
T ss_pred HH-hccHHHHHHHHh--ccchHHHHHHHHHHHHHHHHHHHHhh---HHhhhccccceEecCCCeeeeccccchhhcCc--
Confidence 99 678788776544 47888899999999999999999998 99999999999999999999999999987654
Q ss_pred CcCCCccccCCCCCCCCCCCccccc---cCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhhcCccccccCCCCCC
Q 003703 609 LYLPSFHRSTAPKGSFPYADPEYHR---TGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGD 685 (801)
Q Consensus 609 ~~~~~~~~~~~~~Gt~~Y~APE~~~---~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~g~~~~~~d~~~~~ 685 (801)
...++|||.|||||++. .+.|+-|+|||||||+..||.-.++|+...+.+..++....-. .|.+.
T Consensus 179 --------AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNe---sPtLq- 246 (948)
T KOG0577|consen 179 --------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNE---SPTLQ- 246 (948)
T ss_pred --------hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcC---CCCCC-
Confidence 34678999999999874 5789999999999999999999999976555443333211110 11111
Q ss_pred CCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHH
Q 003703 686 WPTFVARRLVDLGLQCCELYGRERPDITPSLVK 718 (801)
Q Consensus 686 ~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~ 718 (801)
..+.+..|..++..||+.-|.+|||..+.+.+
T Consensus 247 -s~eWS~~F~~Fvd~CLqKipqeRptse~ll~H 278 (948)
T KOG0577|consen 247 -SNEWSDYFRNFVDSCLQKIPQERPTSEELLKH 278 (948)
T ss_pred -CchhHHHHHHHHHHHHhhCcccCCcHHHHhhc
Confidence 33567789999999999999999998854433
No 201
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2.5e-35 Score=315.99 Aligned_cols=246 Identities=27% Similarity=0.386 Sum_probs=195.0
Q ss_pred CccccceeeecCceEEEEEEEC--CeEEEEEEeccCC-cccHHHHHHHHHHHhcCCCCceeeEecccc--CCcceeeecC
Q 003703 456 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHN-MQGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYL 530 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~-~~~~~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~LV~E~~ 530 (801)
+|...+.||+|+||.||++... |..||+|.+.... ......+.+|+.++.+++||||+++++++. ...++||||+
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYM 81 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeec
Confidence 5667788999999999999886 8999999886542 233456889999999999999999999884 4578999999
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCc
Q 003703 531 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLY 610 (801)
Q Consensus 531 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~ 610 (801)
++++|..++........+++..+..++.+++.||.|||+.. +|+|+||||+||+++.++.+||+|||++..+....
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~-- 157 (286)
T cd06622 82 DAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEH--NIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASL-- 157 (286)
T ss_pred CCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcC--CEeeCCCCHHHEEECCCCCEEEeecCCcccccCCc--
Confidence 99999888866433346899999999999999999999742 39999999999999999999999999987653321
Q ss_pred CCCccccCCCCCCCCCCCccccccC------CCCcchhHHhHHHHHHHHHhCCCCCCChhH--HHHHhhcCccccccCCC
Q 003703 611 LPSFHRSTAPKGSFPYADPEYHRTG------VLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILDPL 682 (801)
Q Consensus 611 ~~~~~~~~~~~Gt~~Y~APE~~~~~------~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~--~~~~~~~g~~~~~~d~~ 682 (801)
.....|++.|+|||++.+. .++.++|||||||++|+|++|+.||..... ....+ ..+.+..
T Consensus 158 ------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~-----~~~~~~~ 226 (286)
T cd06622 158 ------AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQL-----SAIVDGD 226 (286)
T ss_pred ------cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHH-----HHHhhcC
Confidence 2334688999999988544 358899999999999999999999964322 11111 1111111
Q ss_pred CCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 683 AGDWPTFVARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 683 ~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
....+...+..+.+++.+||+.+|.+||++.+.+
T Consensus 227 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~ 260 (286)
T cd06622 227 PPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLL 260 (286)
T ss_pred CCCCCcccCHHHHHHHHHHcccCcccCCCHHHHh
Confidence 2233445677899999999999999999998544
No 202
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=7.3e-35 Score=307.36 Aligned_cols=249 Identities=26% Similarity=0.348 Sum_probs=200.3
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEecccc--CCcceeeecC
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYL 530 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~LV~E~~ 530 (801)
++|.....||.|+||.||+|... +..+|+|.+..........+.+|+.++++++||||++++|++. ...+++|||+
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~ 82 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYC 82 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCC
Confidence 56788889999999999999874 7889999997765555667899999999999999999999874 3578999999
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCc
Q 003703 531 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLY 610 (801)
Q Consensus 531 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~ 610 (801)
++++|.+++.... ..++...+..++.|++.||.|||+.+ |+|+||+|+||+++.++.+||+|||++.......
T Consensus 83 ~~~~l~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~-- 155 (262)
T cd06613 83 GGGSLQDIYQVTR--GPLSELQIAYVCRETLKGLAYLHETG---KIHRDIKGANILLTEDGDVKLADFGVSAQLTATI-- 155 (262)
T ss_pred CCCcHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHhCC---ceecCCChhhEEECCCCCEEECccccchhhhhhh--
Confidence 9999999886542 35888999999999999999999987 9999999999999999999999999987654322
Q ss_pred CCCccccCCCCCCCCCCCccccccC---CCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhhcCccccccCCCCCCCC
Q 003703 611 LPSFHRSTAPKGSFPYADPEYHRTG---VLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWP 687 (801)
Q Consensus 611 ~~~~~~~~~~~Gt~~Y~APE~~~~~---~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~g~~~~~~d~~~~~~~ 687 (801)
.......|+..|+|||++.+. .++.++|||||||++|+|+||++||.............. .. +.+.....+
T Consensus 156 ----~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~-~~-~~~~~~~~~ 229 (262)
T cd06613 156 ----AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISK-SN-FPPPKLKDK 229 (262)
T ss_pred ----hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh-cc-CCCccccch
Confidence 122345689999999998776 889999999999999999999999975443222211110 00 111111223
Q ss_pred HHHHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 688 TFVARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 688 ~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
...+..+.+++.+||..+|.+||++.+.+
T Consensus 230 ~~~~~~~~~li~~~l~~~p~~Rpt~~~il 258 (262)
T cd06613 230 EKWSPVFHDFIKKCLTKDPKKRPTATKLL 258 (262)
T ss_pred hhhhHHHHHHHHHHcCCChhhCCCHHHHh
Confidence 34567899999999999999999998433
No 203
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=3.3e-35 Score=311.55 Aligned_cols=244 Identities=23% Similarity=0.317 Sum_probs=193.6
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEecccc--CCcceeeecC
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYL 530 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~LV~E~~ 530 (801)
++|...+.||+|+||.||+|... +..||+|.++.........+.+|+.++..++||||+++++++. +..++||||+
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~ 88 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC 88 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence 46677778999999999999874 7899999987665555556889999999999999999999874 4578999999
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCc
Q 003703 531 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLY 610 (801)
Q Consensus 531 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~ 610 (801)
++++|.+++.... .+++...+.++.|++.||.|||+.+ |+|+||||+||+++.++.+||+|||++.......
T Consensus 89 ~~~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~-- 160 (267)
T cd06645 89 GGGSLQDIYHVTG---PLSESQIAYVSRETLQGLYYLHSKG---KMHRDIKGANILLTDNGHVKLADFGVSAQITATI-- 160 (267)
T ss_pred CCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECcceeeeEccCcc--
Confidence 9999999886543 5888999999999999999999988 9999999999999999999999999997664322
Q ss_pred CCCccccCCCCCCCCCCCccccc---cCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHH--hhcCccccccCCCCCC
Q 003703 611 LPSFHRSTAPKGSFPYADPEYHR---TGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRA--VSCGKLSSILDPLAGD 685 (801)
Q Consensus 611 ~~~~~~~~~~~Gt~~Y~APE~~~---~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~--~~~g~~~~~~d~~~~~ 685 (801)
.......||+.|+|||++. .+.++.++|||||||++|+|++|..||......... ....... .+...
T Consensus 161 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~---~~~~~- 232 (267)
T cd06645 161 ----AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQ---PPKLK- 232 (267)
T ss_pred ----cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCC---CCccc-
Confidence 1223457999999999874 456889999999999999999999998543321111 1111111 01000
Q ss_pred CCHHHHHHHHHHHHHhhhhCCCCCCCchH
Q 003703 686 WPTFVARRLVDLGLQCCELYGRERPDITP 714 (801)
Q Consensus 686 ~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e 714 (801)
.....+..+.+++.+||..+|.+||++.+
T Consensus 233 ~~~~~~~~~~~li~~~l~~~P~~R~~~~~ 261 (267)
T cd06645 233 DKMKWSNSFHHFVKMALTKNPKKRPTAEK 261 (267)
T ss_pred ccCCCCHHHHHHHHHHccCCchhCcCHHH
Confidence 01123456889999999999999999984
No 204
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-36 Score=337.72 Aligned_cols=250 Identities=28% Similarity=0.444 Sum_probs=209.6
Q ss_pred cccceeeecCceEEEEEEEC--C---eEEEEEEeccCCcc-cHHHHHHHHHHHhcCCCCceeeEeccccC--Ccceeeec
Q 003703 458 SESFKVGQGGFGCVYKGEML--G---RTVAIKMLYSHNMQ-GQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEY 529 (801)
Q Consensus 458 ~~~~~LG~G~fG~Vy~g~~~--g---~~vAiK~l~~~~~~-~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E~ 529 (801)
.+.++||.|-||.||+|+++ | ..||||.|+..... .+.+|..|..||.++.||||++|-|+... ...+|.||
T Consensus 632 ~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTEy 711 (996)
T KOG0196|consen 632 KIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITEY 711 (996)
T ss_pred EEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhhh
Confidence 34678999999999999986 4 57999999877554 34579999999999999999999999854 36789999
Q ss_pred CCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCC
Q 003703 530 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTL 609 (801)
Q Consensus 530 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~ 609 (801)
|+||+|+.+|..+. ..|++-+..-++.+||.|+.||-+.+ +|||||...|||++.+..+|++||||++.+.++.
T Consensus 712 MENGsLDsFLR~~D--GqftviQLVgMLrGIAsGMkYLsdm~---YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~- 785 (996)
T KOG0196|consen 712 MENGSLDSFLRQND--GQFTVIQLVGMLRGIASGMKYLSDMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP- 785 (996)
T ss_pred hhCCcHHHHHhhcC--CceEeehHHHHHHHHHHHhHHHhhcC---chhhhhhhhheeeccceEEEeccccceeecccCC-
Confidence 99999999998776 45899999999999999999999998 9999999999999999999999999999886554
Q ss_pred cCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCCh--hHHHHHhhcCccccccCCCCCCC
Q 003703 610 YLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLA--GEVRRAVSCGKLSSILDPLAGDW 686 (801)
Q Consensus 610 ~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~--~~~~~~~~~g~~~~~~d~~~~~~ 686 (801)
+..+.+....-...|.|||.+...++|.++|||||||+|||.++ |..||... .++..++..|... .-
T Consensus 786 --~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gyRL--------Pp 855 (996)
T KOG0196|consen 786 --EAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGYRL--------PP 855 (996)
T ss_pred --CccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhccCC--------CC
Confidence 12222333334568999999999999999999999999999777 99997532 2466666666321 23
Q ss_pred CHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHHhh
Q 003703 687 PTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLH 724 (801)
Q Consensus 687 ~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~l~ 724 (801)
|.+++..|.+|++.||++|..+||.+. .++..|+.+-
T Consensus 856 PmDCP~aL~qLMldCWqkdR~~RP~F~-qiV~~lDklI 892 (996)
T KOG0196|consen 856 PMDCPAALYQLMLDCWQKDRNRRPKFA-QIVSTLDKLI 892 (996)
T ss_pred CCCCcHHHHHHHHHHHHHHhhcCCCHH-HHHHHHHHHh
Confidence 455677999999999999999999999 7888888764
No 205
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=9.3e-35 Score=305.89 Aligned_cols=243 Identities=24% Similarity=0.311 Sum_probs=198.1
Q ss_pred CccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEeccccC---Ccceeee
Q 003703 456 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACPE---AWSLVYE 528 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~--~~~~~f~~E~~il~~l~HpnIV~l~g~~~~---~~~LV~E 528 (801)
+|...+.||.|+||.||++... +..||+|.+..... .....+.+|+.++++++|||++++++.+.. ..++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 4677889999999999999875 78899999865433 234468899999999999999999988742 2579999
Q ss_pred cCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCC
Q 003703 529 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDT 608 (801)
Q Consensus 529 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~ 608 (801)
|+++++|.+++.... ...+++..+..++.+++.||.|||+.+ |+|+||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~~l~~~l~~~~-~~~l~~~~~~~~~~~l~~~l~~lH~~~---i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~ 156 (257)
T cd08223 81 FCEGGDLYHKLKEQK-GKLLPENQVVEWFVQIAMALQYLHEKH---ILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC 156 (257)
T ss_pred ccCCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCchhEEEecCCcEEEecccceEEecccC
Confidence 999999999887543 246899999999999999999999988 9999999999999999999999999998764322
Q ss_pred CcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhH--HHHHhhcCccccccCCCCCCC
Q 003703 609 LYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILDPLAGDW 686 (801)
Q Consensus 609 ~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~--~~~~~~~g~~~~~~d~~~~~~ 686 (801)
. ......|++.|+|||++.+..++.++|||||||++|+|++|+.||...+. ....+..+.+. ..
T Consensus 157 ~------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~--------~~ 222 (257)
T cd08223 157 D------MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKLP--------PM 222 (257)
T ss_pred C------ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCC--------CC
Confidence 1 22345689999999999999999999999999999999999999974432 11222223221 22
Q ss_pred CHHHHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 687 PTFVARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 687 ~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
+...+..+.+++.+|++.+|.+||++.+.+
T Consensus 223 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l 252 (257)
T cd08223 223 PKDYSPELGELIATMLSKRPEKRPSVKSIL 252 (257)
T ss_pred ccccCHHHHHHHHHHhccCcccCCCHHHHh
Confidence 334567899999999999999999998544
No 206
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=9e-36 Score=324.02 Aligned_cols=258 Identities=27% Similarity=0.426 Sum_probs=203.5
Q ss_pred cCccccceeeecCceEEEEEEECC-eEEEEEEeccCCcccH-HHHHHHHHHHhcCCCCceeeEeccc--cCCcceeeecC
Q 003703 455 CNFSESFKVGQGGFGCVYKGEMLG-RTVAIKMLYSHNMQGQ-LEFQQEVRVLSKLQHPHLVTLLGAC--PEAWSLVYEYL 530 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~g-~~vAiK~l~~~~~~~~-~~f~~E~~il~~l~HpnIV~l~g~~--~~~~~LV~E~~ 530 (801)
......++||+|-||.|.++...| ..||+|.++.....+. .+|..|+++|.+++|||||.|+|+| ++.+++|+|||
T Consensus 538 s~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYm 617 (807)
T KOG1094|consen 538 SRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYM 617 (807)
T ss_pred hheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHH
Confidence 444566789999999999999986 9999999998776554 7899999999999999999999999 55689999999
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCc
Q 003703 531 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLY 610 (801)
Q Consensus 531 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~ 610 (801)
++|+|.++|..+.... +.-....+|+.||+.|++||.+.+ +|||||.+.|+|+|.++++||+|||+++-+-.+..+
T Consensus 618 EnGDLnqFl~aheapt-~~t~~~vsi~tqiasgmaYLes~n---fVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy 693 (807)
T KOG1094|consen 618 ENGDLNQFLSAHELPT-AETAPGVSICTQIASGMAYLESLN---FVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYY 693 (807)
T ss_pred hcCcHHHHHHhccCcc-cccchhHHHHHHHHHHHHHHHhhc---hhhccccccceeecCcccEEecCcccccccccCCce
Confidence 9999999998774322 344556789999999999999998 999999999999999999999999999966544322
Q ss_pred CCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh--CCCCCCChhHHHHHhhcCccccccCC-CCCCCC
Q 003703 611 LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT--GRLPVGLAGEVRRAVSCGKLSSILDP-LAGDWP 687 (801)
Q Consensus 611 ~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt--G~~Pf~~~~~~~~~~~~g~~~~~~d~-~~~~~~ 687 (801)
+.....+-...|||||.+..+++++++|||+|||+|||+++ ...||.....-.-.-+.+.+..-..+ .....|
T Consensus 694 ----~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~~P 769 (807)
T KOG1094|consen 694 ----RVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLSRP 769 (807)
T ss_pred ----eeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceeccCC
Confidence 22334455678999999999999999999999999999765 77899743321111111221111111 112345
Q ss_pred HHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHH
Q 003703 688 TFVARRLVDLGLQCCELYGRERPDITPSLVKELE 721 (801)
Q Consensus 688 ~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~ 721 (801)
.-++..+.+|+++||..+-.+||++. .|...|.
T Consensus 770 ~~cp~~lyelml~Cw~~es~~RPsFe-~lh~~lq 802 (807)
T KOG1094|consen 770 PACPQGLYELMLRCWRRESEQRPSFE-QLHLFLQ 802 (807)
T ss_pred CcCcHHHHHHHHHHhchhhhcCCCHH-HHHHHHH
Confidence 56777899999999999999999998 4544444
No 207
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=3.7e-35 Score=312.27 Aligned_cols=243 Identities=29% Similarity=0.454 Sum_probs=190.1
Q ss_pred eeeecCceEEEEEEEC--Ce--EEEEEEeccCC-cccHHHHHHHHHHHhcC-CCCceeeEeccccC--CcceeeecCCCC
Q 003703 462 KVGQGGFGCVYKGEML--GR--TVAIKMLYSHN-MQGQLEFQQEVRVLSKL-QHPHLVTLLGACPE--AWSLVYEYLPNG 533 (801)
Q Consensus 462 ~LG~G~fG~Vy~g~~~--g~--~vAiK~l~~~~-~~~~~~f~~E~~il~~l-~HpnIV~l~g~~~~--~~~LV~E~~~~g 533 (801)
.||+|+||.||+|.+. |. .+|+|.++... ......+.+|+.++.++ +||||++++++|.. ..++||||+++|
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 81 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHG 81 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCCC
Confidence 5899999999999875 33 57889887533 23345688999999999 89999999999854 478999999999
Q ss_pred chhhhhhhcC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccc
Q 003703 534 SLQDRLFRKS-------------NVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGI 600 (801)
Q Consensus 534 sL~~~L~~~~-------------~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGl 600 (801)
+|.+++.... ....+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||+
T Consensus 82 ~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~---i~H~dikp~nili~~~~~~kl~dfgl 158 (270)
T cd05047 82 NLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFGL 158 (270)
T ss_pred cHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccccceEEEcCCCeEEECCCCC
Confidence 9999987543 1235789999999999999999999977 99999999999999999999999999
Q ss_pred eeeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChhH--HHHHhhcCcccc
Q 003703 601 CRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKLSS 677 (801)
Q Consensus 601 a~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~~--~~~~~~~g~~~~ 677 (801)
+....... ......+++.|+|||++....++.++|||||||++|||++ |..||..... ....+..+..
T Consensus 159 ~~~~~~~~-------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~-- 229 (270)
T cd05047 159 SRGQEVYV-------KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR-- 229 (270)
T ss_pred ccccchhh-------hccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCCCC--
Confidence 86322110 1122234678999999988899999999999999999997 9999964322 2222222111
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHHh
Q 003703 678 ILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 723 (801)
Q Consensus 678 ~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~l 723 (801)
...+...+..+.+|+.+||..+|.+||++. +++..|+.+
T Consensus 230 ------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~-~il~~l~~~ 268 (270)
T cd05047 230 ------LEKPLNCDDEVYDLMRQCWREKPYERPSFA-QILVSLNRM 268 (270)
T ss_pred ------CCCCCcCCHHHHHHHHHHcccChhhCCCHH-HHHHHHHHh
Confidence 112223456789999999999999999999 677777654
No 208
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=2.7e-35 Score=327.66 Aligned_cols=250 Identities=22% Similarity=0.260 Sum_probs=191.8
Q ss_pred HhcCccccceeeecCceEEEEEEEC--CeEEEEEEeccCC--cccHHHHHHHHHHHhcCCCCceeeEeccccC-------
Q 003703 453 ATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHN--MQGQLEFQQEVRVLSKLQHPHLVTLLGACPE------- 521 (801)
Q Consensus 453 at~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~--~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~------- 521 (801)
..++|...+.||+|+||.||++... +..||||++.... ......+.+|+.++..++||||+++++++..
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 3568999999999999999999875 8899999987542 2233467889999999999999999987632
Q ss_pred -CcceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccc
Q 003703 522 -AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGI 600 (801)
Q Consensus 522 -~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGl 600 (801)
..++||||+++ +|.+.+.. .+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 102 ~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~ 172 (364)
T cd07875 102 QDVYIVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 172 (364)
T ss_pred CeEEEEEeCCCC-CHHHHHHh-----cCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEECCCCcEEEEeCCC
Confidence 25899999965 67666632 4778899999999999999999987 99999999999999999999999999
Q ss_pred eeeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHH---hh-cC---
Q 003703 601 CRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRA---VS-CG--- 673 (801)
Q Consensus 601 a~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~---~~-~g--- 673 (801)
++...... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||...+..... +. .+
T Consensus 173 a~~~~~~~-------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~ 245 (364)
T cd07875 173 ARTAGTSF-------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPC 245 (364)
T ss_pred ccccCCCC-------cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence 98654322 123457899999999999999999999999999999999999999643321110 00 00
Q ss_pred -------------------cc-----ccc----cCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHH
Q 003703 674 -------------------KL-----SSI----LDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVK 718 (801)
Q Consensus 674 -------------------~~-----~~~----~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~ 718 (801)
.+ ..+ +-+............+.+|+.+|++.||.+|||+.+.+.+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 246 PEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318 (364)
T ss_pred HHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 00 000 0000011111234578899999999999999999864433
No 209
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=6.4e-35 Score=317.10 Aligned_cols=248 Identities=25% Similarity=0.344 Sum_probs=193.7
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEecccc--CCcceeeec
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEY 529 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~-~~~~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~LV~E~ 529 (801)
++|...+.||+|+||.||++... |..||+|.+..... .....+.+|+.++.+++||||++++++|. +..++||||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH 80 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence 36888899999999999999875 78899999865432 23346889999999999999999999984 457899999
Q ss_pred CCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCC
Q 003703 530 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTL 609 (801)
Q Consensus 530 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~ 609 (801)
+++++|.+++... ..+++..+..++.|++.||.|||+.. +++|+||||+|||++.++.+||+|||++.......
T Consensus 81 ~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~- 154 (308)
T cd06615 81 MDGGSLDQVLKKA---GRIPENILGKISIAVLRGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM- 154 (308)
T ss_pred cCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhhC--CEEECCCChHHEEEecCCcEEEccCCCcccccccc-
Confidence 9999999998654 35888999999999999999999842 39999999999999999999999999987653321
Q ss_pred cCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHH--HHHhhcCccccccC-------
Q 003703 610 YLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEV--RRAVSCGKLSSILD------- 680 (801)
Q Consensus 610 ~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~--~~~~~~g~~~~~~d------- 680 (801)
.....|++.|+|||++.+..++.++|||||||++|+|+||+.||...... ...+.. .......
T Consensus 155 -------~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 226 (308)
T cd06615 155 -------ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGR-PVSEGEAKESHRPV 226 (308)
T ss_pred -------cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcC-ccccccccCCcccc
Confidence 23457899999999998888999999999999999999999998533211 111100 0000000
Q ss_pred ----------------------CCCCCCC-HHHHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 681 ----------------------PLAGDWP-TFVARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 681 ----------------------~~~~~~~-~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
......+ ...+..+.+|+.+||..+|.+||++.+.+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll 285 (308)
T cd06615 227 SGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELT 285 (308)
T ss_pred cCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHh
Confidence 0000000 11455789999999999999999998544
No 210
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=5.1e-35 Score=307.99 Aligned_cols=243 Identities=23% Similarity=0.308 Sum_probs=197.1
Q ss_pred CccccceeeecCceEEEEEEEC--CeEEEEEEeccCC-cccHHHHHHHHHHHhcCCCCceeeEeccccC--CcceeeecC
Q 003703 456 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHN-MQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYL 530 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~-~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E~~ 530 (801)
+|...+.||.|+||.||++... +..||+|.+.... ......+.+|+.+++.++||||+++++++.+ ..++||||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 4667789999999999999875 7899999986433 2334568899999999999999999998843 578999999
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCc
Q 003703 531 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLY 610 (801)
Q Consensus 531 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~ 610 (801)
++|+|.+++.... ...++....+.++.+++.||.|||+.+ |+|+||||+||+++.++.++|+|||++........
T Consensus 81 ~~~~l~~~~~~~~-~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~- 155 (255)
T cd08219 81 DGGDLMQKIKLQR-GKLFPEDTILQWFVQMCLGVQHIHEKR---VLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGA- 155 (255)
T ss_pred CCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEECCCCcEEEcccCcceeeccccc-
Confidence 9999999886532 245788999999999999999999987 99999999999999999999999999987643321
Q ss_pred CCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHH--HHHhhcCccccccCCCCCCCCH
Q 003703 611 LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEV--RRAVSCGKLSSILDPLAGDWPT 688 (801)
Q Consensus 611 ~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~--~~~~~~g~~~~~~d~~~~~~~~ 688 (801)
......|++.|+|||++.+..++.++||||||+++|+|++|..||...... ...+..+... ..+.
T Consensus 156 -----~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~--------~~~~ 222 (255)
T cd08219 156 -----YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYK--------PLPS 222 (255)
T ss_pred -----ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCCC--------CCCc
Confidence 123456899999999998888999999999999999999999999754432 1222222221 1223
Q ss_pred HHHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 689 FVARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 689 ~~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
..+..+.+|+.+||+.||.+||++.+.+
T Consensus 223 ~~~~~~~~li~~~l~~~P~~Rp~~~~il 250 (255)
T cd08219 223 HYSYELRSLIKQMFKRNPRSRPSATTIL 250 (255)
T ss_pred ccCHHHHHHHHHHHhCCcccCCCHHHHh
Confidence 3456788999999999999999998543
No 211
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=7e-35 Score=317.58 Aligned_cols=255 Identities=27% Similarity=0.448 Sum_probs=201.2
Q ss_pred cCccccceeeecCceEEEEEEEC---------CeEEEEEEeccCCc-ccHHHHHHHHHHHhcC-CCCceeeEeccccC--
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML---------GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKL-QHPHLVTLLGACPE-- 521 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~---------g~~vAiK~l~~~~~-~~~~~f~~E~~il~~l-~HpnIV~l~g~~~~-- 521 (801)
.+|...+.||+|+||.||+++.. +..||+|.+..... .....+.+|+.++.++ +||||++++++|.+
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEG 91 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCC
Confidence 46777889999999999999752 35799999875432 3345688999999999 69999999998853
Q ss_pred CcceeeecCCCCchhhhhhhcCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeec
Q 003703 522 AWSLVYEYLPNGSLQDRLFRKSN-------------VSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLD 588 (801)
Q Consensus 522 ~~~LV~E~~~~gsL~~~L~~~~~-------------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd 588 (801)
..++||||+++|+|.+++..... ...++|..+..++.|++.||.|||+.+ |+||||||+|||++
T Consensus 92 ~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---i~H~dlkp~Nill~ 168 (314)
T cd05099 92 PLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRR---CIHRDLAARNVLVT 168 (314)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCC---eeeccccceeEEEc
Confidence 47899999999999999865421 235899999999999999999999987 99999999999999
Q ss_pred CCCCeeeecccceeeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChh--H
Q 003703 589 SELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAG--E 665 (801)
Q Consensus 589 ~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~--~ 665 (801)
.++.+||+|||+++........ .......+++.|+|||++.+..++.++|||||||++|+|++ |..||.... .
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~ 244 (314)
T cd05099 169 EDNVMKIADFGLARGVHDIDYY----KKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEE 244 (314)
T ss_pred CCCcEEEccccccccccccccc----cccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHH
Confidence 9999999999999876432211 11122335568999999988899999999999999999999 889986432 2
Q ss_pred HHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHHhhh
Q 003703 666 VRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHV 725 (801)
Q Consensus 666 ~~~~~~~g~~~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~l~~ 725 (801)
....+..+... ..+...+..+.+|+.+||..+|.+||++. ++...|..+..
T Consensus 245 ~~~~~~~~~~~--------~~~~~~~~~l~~li~~cl~~~p~~Rps~~-~ll~~l~~~~~ 295 (314)
T cd05099 245 LFKLLREGHRM--------DKPSNCTHELYMLMRECWHAVPTQRPTFK-QLVEALDKVLA 295 (314)
T ss_pred HHHHHHcCCCC--------CCCCCCCHHHHHHHHHHcCCCcccCcCHH-HHHHHHHHHHH
Confidence 33333332211 12233455788999999999999999998 78888887654
No 212
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=3e-35 Score=314.25 Aligned_cols=232 Identities=24% Similarity=0.385 Sum_probs=180.9
Q ss_pred eeeecCceEEEEEEEC--------------------------CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeE
Q 003703 462 KVGQGGFGCVYKGEML--------------------------GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTL 515 (801)
Q Consensus 462 ~LG~G~fG~Vy~g~~~--------------------------g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l 515 (801)
.||+|+||.||+|.+. ...||+|++..........|.+|+.+++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 5999999999999752 13589999876544445578899999999999999999
Q ss_pred eccccC--CcceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCC--
Q 003703 516 LGACPE--AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSEL-- 591 (801)
Q Consensus 516 ~g~~~~--~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~-- 591 (801)
+|+|.+ ..++||||+++|+|..++.... ..+++..++.|+.||+.||.|||+.+ |+||||||+|||++..+
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~---iiH~dlkp~Nill~~~~~~ 156 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRKEK--GRVPVAWKITVAQQLASALSYLEDKN---LVHGNVCAKNILLARLGLA 156 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHcCC---ccCCCCCcccEEEeccCcc
Confidence 999854 4789999999999999886543 46889999999999999999999977 99999999999997654
Q ss_pred -----CeeeecccceeeccCCCCcCCCccccCCCCCCCCCCCcccccc-CCCCcchhHHhHHHHHHHHH-hCCCCCCChh
Q 003703 592 -----SSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLL-TGRLPVGLAG 664 (801)
Q Consensus 592 -----~vKL~DFGla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~-~~~s~ksDVwSlGvvL~ELl-tG~~Pf~~~~ 664 (801)
.+||+|||++...... ....+++.|+|||++.+ ..++.++|||||||++|||+ +|+.||....
T Consensus 157 ~~~~~~~kl~d~g~~~~~~~~----------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~ 226 (274)
T cd05076 157 EGTSPFIKLSDPGVSFTALSR----------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERT 226 (274)
T ss_pred cCccceeeecCCccccccccc----------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccC
Confidence 3799999987643221 22357888999998865 56899999999999999985 6999986432
Q ss_pred HH--HHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHH
Q 003703 665 EV--RRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKE 719 (801)
Q Consensus 665 ~~--~~~~~~g~~~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~ 719 (801)
.. ...+.... ..+......+.+++.+||+.+|.+||++. .++..
T Consensus 227 ~~~~~~~~~~~~----------~~~~~~~~~~~~li~~cl~~~p~~Rps~~-~il~~ 272 (274)
T cd05076 227 PSEKERFYEKKH----------RLPEPSCKELATLISQCLTYEPTQRPSFR-TILRD 272 (274)
T ss_pred hHHHHHHHHhcc----------CCCCCCChHHHHHHHHHcccChhhCcCHH-HHHHh
Confidence 21 11111100 11111234789999999999999999998 44443
No 213
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=3.5e-35 Score=312.79 Aligned_cols=240 Identities=26% Similarity=0.338 Sum_probs=196.4
Q ss_pred CccccceeeecCceEEEEEEEC--CeEEEEEEeccCC-cccHHHHHHHHHHHhcCCCCceeeEeccccC--CcceeeecC
Q 003703 456 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHN-MQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYL 530 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~-~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E~~ 530 (801)
+|.....||.|+||.||+|... +..||+|.+.... ......+.+|+.+++.++||||+++++++.+ ..++|+||+
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYC 81 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEee
Confidence 5677788999999999999875 7899999987654 2334568899999999999999999998844 478999999
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCc
Q 003703 531 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLY 610 (801)
Q Consensus 531 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~ 610 (801)
++++|.+++... ++++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||+++.......
T Consensus 82 ~~~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~- 153 (274)
T cd06609 82 GGGSCLDLLKPG----KLDETYIAFILREVLLGLEYLHEEG---KIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMS- 153 (274)
T ss_pred CCCcHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEcccccceeeccccc-
Confidence 999999988643 6889999999999999999999987 99999999999999999999999999988754321
Q ss_pred CCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHH--HHhhcCccccccCCCCCCCCH
Q 003703 611 LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVR--RAVSCGKLSSILDPLAGDWPT 688 (801)
Q Consensus 611 ~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~--~~~~~g~~~~~~d~~~~~~~~ 688 (801)
......|++.|+|||++.+..++.++|||||||++|+|+||+.||....... ..+..+... ..+.
T Consensus 154 -----~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~--------~~~~ 220 (274)
T cd06609 154 -----KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNPP--------SLEG 220 (274)
T ss_pred -----ccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcCCC--------CCcc
Confidence 2234568999999999998889999999999999999999999996443221 111111111 1111
Q ss_pred H-HHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 689 F-VARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 689 ~-~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
. .+..+.+++.+||..+|.+||++.+.+
T Consensus 221 ~~~~~~~~~~l~~~l~~~p~~Rpt~~~il 249 (274)
T cd06609 221 NKFSKPFKDFVSLCLNKDPKERPSAKELL 249 (274)
T ss_pred cccCHHHHHHHHHHhhCChhhCcCHHHHh
Confidence 1 456789999999999999999998544
No 214
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=3.8e-35 Score=317.23 Aligned_cols=247 Identities=26% Similarity=0.368 Sum_probs=200.0
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEecccc--CCcceeeecC
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYL 530 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~LV~E~~ 530 (801)
.+|...+.||.|+||.||+|... |..||+|.+..........+.+|+.+++.++||||++++++|. +..++||||+
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 98 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 98 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeeccc
Confidence 56788889999999999999874 8999999997665555667889999999999999999999884 3578999999
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCc
Q 003703 531 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLY 610 (801)
Q Consensus 531 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~ 610 (801)
++++|.+++.. ..+++..+..++.+++.||.|||+.+ |+||||||+|||++.++.++|+|||++........
T Consensus 99 ~~~~L~~~~~~----~~~~~~~~~~~~~~l~~~L~~LH~~~---i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~- 170 (297)
T cd06656 99 AGGSLTDVVTE----TCMDEGQIAAVCRECLQALDFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS- 170 (297)
T ss_pred CCCCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEECcCccceEccCCcc-
Confidence 99999998854 34788999999999999999999987 99999999999999999999999999987643321
Q ss_pred CCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhhcCccccccCCCCCCCCHHH
Q 003703 611 LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFV 690 (801)
Q Consensus 611 ~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~g~~~~~~d~~~~~~~~~~ 690 (801)
......|++.|+|||.+.+..++.++|||||||++|+|++|+.||...+........... .......+...
T Consensus 171 -----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~----~~~~~~~~~~~ 241 (297)
T cd06656 171 -----KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN----GTPELQNPERL 241 (297)
T ss_pred -----CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccC----CCCCCCCcccc
Confidence 123446899999999999888999999999999999999999999654332211111000 00011223345
Q ss_pred HHHHHHHHHHhhhhCCCCCCCchHHHHH
Q 003703 691 ARRLVDLGLQCCELYGRERPDITPSLVK 718 (801)
Q Consensus 691 ~~~l~~Li~~Cl~~dP~~RPt~~e~l~~ 718 (801)
+..+.+++.+||..+|.+||++.+.+.+
T Consensus 242 ~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (297)
T cd06656 242 SAVFRDFLNRCLEMDVDRRGSAKELLQH 269 (297)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 5678899999999999999999854443
No 215
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=1.8e-35 Score=330.05 Aligned_cols=249 Identities=23% Similarity=0.316 Sum_probs=192.9
Q ss_pred HHHHHHHhcCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEeccccC
Q 003703 447 LADLQTATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACPE 521 (801)
Q Consensus 447 ~~el~~at~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~---~~~~~f~~E~~il~~l~HpnIV~l~g~~~~ 521 (801)
+.++....++|...+.||+|+||.||+++.. +..||+|++..... .....+.+|+.++..++||||+++++++.+
T Consensus 35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~ 114 (371)
T cd05622 35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 114 (371)
T ss_pred HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence 3444555678999999999999999999885 78999999864322 223457889999999999999999998854
Q ss_pred --CcceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeeccc
Q 003703 522 --AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFG 599 (801)
Q Consensus 522 --~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFG 599 (801)
..++||||+++|+|.+++... .++...+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||
T Consensus 115 ~~~~~lv~Ey~~gg~L~~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NIll~~~~~ikL~DfG 187 (371)
T cd05622 115 DRYLYMVMEYMPGGDLVNLMSNY----DVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFG 187 (371)
T ss_pred CCEEEEEEcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHEEECCCCCEEEEeCC
Confidence 478999999999999988543 3677888999999999999999988 9999999999999999999999999
Q ss_pred ceeeccCCCCcCCCccccCCCCCCCCCCCccccccC----CCCcchhHHhHHHHHHHHHhCCCCCCChhHH--HHHhhcC
Q 003703 600 ICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTG----VLTPKSDSYSFGLIILQLLTGRLPVGLAGEV--RRAVSCG 673 (801)
Q Consensus 600 la~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~----~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~--~~~~~~g 673 (801)
+++....... .......||+.|+|||++... .++.++|||||||++|||++|++||...... ...+...
T Consensus 188 ~a~~~~~~~~-----~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~ 262 (371)
T cd05622 188 TCMKMNKEGM-----VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNH 262 (371)
T ss_pred ceeEcCcCCc-----ccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcC
Confidence 9987653321 122456799999999998653 3789999999999999999999999754432 2222111
Q ss_pred c-cccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCC---CCCchH
Q 003703 674 K-LSSILDPLAGDWPTFVARRLVDLGLQCCELYGRE---RPDITP 714 (801)
Q Consensus 674 ~-~~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~---RPt~~e 714 (801)
. .... . .+...+..+.+|+.+|+. +|.. ||++.+
T Consensus 263 ~~~~~~-----~-~~~~~s~~~~~li~~~L~-~~~~r~~r~~~~e 300 (371)
T cd05622 263 KNSLTF-----P-DDNDISKEAKNLICAFLT-DREVRLGRNGVEE 300 (371)
T ss_pred CCcccC-----C-CcCCCCHHHHHHHHHHcC-ChhhhcCCCCHHH
Confidence 1 0010 0 112356678899999998 5554 566653
No 216
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=3.9e-35 Score=319.56 Aligned_cols=193 Identities=26% Similarity=0.368 Sum_probs=157.2
Q ss_pred cceeeecCceEEEEEEEC----CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccccC----CcceeeecCC
Q 003703 460 SFKVGQGGFGCVYKGEML----GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACPE----AWSLVYEYLP 531 (801)
Q Consensus 460 ~~~LG~G~fG~Vy~g~~~----g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~----~~~LV~E~~~ 531 (801)
+.+||+|+||.||+|+.. +..||+|.+..... ...+.+|+.+|++++||||+++++++.. ..++||||+.
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 83 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC--cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence 457999999999999863 57899999865432 3357789999999999999999998732 3679999985
Q ss_pred CCchhhhhhhcC------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeee----cCCCCeeeecccce
Q 003703 532 NGSLQDRLFRKS------NVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILL----DSELSSKICDFGIC 601 (801)
Q Consensus 532 ~gsL~~~L~~~~------~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILL----d~~~~vKL~DFGla 601 (801)
++|.+++.... ....+++..+..|+.||+.||.|||+.+ |+||||||+|||+ +.++.+||+|||++
T Consensus 84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07868 84 -HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred -CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence 57877765321 1235889999999999999999999988 9999999999999 45678999999999
Q ss_pred eeccCCCCcCCCccccCCCCCCCCCCCcccccc-CCCCcchhHHhHHHHHHHHHhCCCCCC
Q 003703 602 RLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVG 661 (801)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~-~~~s~ksDVwSlGvvL~ELltG~~Pf~ 661 (801)
+........ ........||+.|+|||++.+ ..++.++|||||||++|+|++|++||.
T Consensus 160 ~~~~~~~~~---~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~ 217 (317)
T cd07868 160 RLFNSPLKP---LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 217 (317)
T ss_pred eccCCCCcc---ccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCcc
Confidence 876533211 112345678999999998876 458999999999999999999999995
No 217
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=6.1e-35 Score=310.11 Aligned_cols=246 Identities=28% Similarity=0.408 Sum_probs=185.3
Q ss_pred eeeecCceEEEEEEEC----CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEeccccC--CcceeeecCCCCc
Q 003703 462 KVGQGGFGCVYKGEML----GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYLPNGS 534 (801)
Q Consensus 462 ~LG~G~fG~Vy~g~~~----g~~vAiK~l~~~~~-~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E~~~~gs 534 (801)
.||+|+||.||+|... ...+|+|.+..... .....|.+|+.++..++||||++++++|.+ ..++||||+++|+
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD 81 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence 5899999999999753 35789998764432 334568899999999999999999998854 4789999999999
Q ss_pred hhhhhhhcCC--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCC
Q 003703 535 LQDRLFRKSN--VSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLP 612 (801)
Q Consensus 535 L~~~L~~~~~--~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~ 612 (801)
|.+++..... ...+++.....++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.........
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~-- 156 (269)
T cd05042 82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD---FIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYY-- 156 (269)
T ss_pred HHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcC---EecccccHhheEecCCCcEEEeccccccccccchhe--
Confidence 9999876532 233567888999999999999999987 999999999999999999999999998764332211
Q ss_pred CccccCCCCCCCCCCCccccc-------cCCCCcchhHHhHHHHHHHHHh-CCCCCCChhHH---HHHhhcCccccccCC
Q 003703 613 SFHRSTAPKGSFPYADPEYHR-------TGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGEV---RRAVSCGKLSSILDP 681 (801)
Q Consensus 613 ~~~~~~~~~Gt~~Y~APE~~~-------~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~---~~~~~~g~~~~~~d~ 681 (801)
.......+++.|+|||++. ...++.++|||||||++|||++ |..||...... ...+..+. ..+.++
T Consensus 157 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~~~ 233 (269)
T cd05042 157 --ITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQD-IKLPKP 233 (269)
T ss_pred --eccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccC-ccCCCC
Confidence 1123345678899999864 3456889999999999999999 78888643321 11122221 112122
Q ss_pred CCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHH
Q 003703 682 LAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKEL 720 (801)
Q Consensus 682 ~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L 720 (801)
.++...+..+.+++..|| .||.+||++. +|...|
T Consensus 234 ---~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~-~v~~~l 267 (269)
T cd05042 234 ---QLDLKYSDRWYEVMQFCW-LDPETRPTAE-EVHELL 267 (269)
T ss_pred ---cccccCCHHHHHHHHHHh-cCcccccCHH-HHHHHh
Confidence 223335566778888888 5999999998 565544
No 218
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=1.2e-34 Score=305.99 Aligned_cols=250 Identities=34% Similarity=0.498 Sum_probs=201.2
Q ss_pred hcCccccceeeecCceEEEEEEEC-CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccccC--CcceeeecC
Q 003703 454 TCNFSESFKVGQGGFGCVYKGEML-GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYL 530 (801)
Q Consensus 454 t~~f~~~~~LG~G~fG~Vy~g~~~-g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E~~ 530 (801)
.++|...+.||+|+||.||+|.+. +..||||.+..... ....+.+|+.++++++||||+++++++.. ..++||||+
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 83 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTM-SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYM 83 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCcc-CHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEecc
Confidence 457888889999999999999876 57899999876443 34578999999999999999999998853 578999999
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCc
Q 003703 531 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLY 610 (801)
Q Consensus 531 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~ 610 (801)
++++|.+++.... ...+++..+..++.+++.||.|||+.+ ++|+||||+||+++.++.+||+|||++..+.....
T Consensus 84 ~~~~L~~~i~~~~-~~~~~~~~~~~~~~~i~~al~~lh~~~---i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~- 158 (261)
T cd05034 84 SKGSLLDFLKSGE-GKKLRLPQLVDMAAQIAEGMAYLESRN---YIHRDLAARNILVGENLVCKIADFGLARLIEDDEY- 158 (261)
T ss_pred CCCCHHHHHhccc-cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcchheEEEcCCCCEEECccccceeccchhh-
Confidence 9999999987643 246899999999999999999999987 99999999999999999999999999987653221
Q ss_pred CCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChhH--HHHHhhcCccccccCCCCCCCC
Q 003703 611 LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWP 687 (801)
Q Consensus 611 ~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~~--~~~~~~~g~~~~~~d~~~~~~~ 687 (801)
.......++..|+|||.+.+..++.++|||||||++|+|+| |+.||..... ....+..+.. ...+
T Consensus 159 ----~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~--------~~~~ 226 (261)
T cd05034 159 ----TAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYR--------MPRP 226 (261)
T ss_pred ----hhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC--------CCCC
Confidence 11123345678999999998899999999999999999999 9999964332 2222222110 0112
Q ss_pred HHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHH
Q 003703 688 TFVARRLVDLGLQCCELYGRERPDITPSLVKELEQ 722 (801)
Q Consensus 688 ~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~ 722 (801)
...+..+.+++.+|++.+|.+||++. ++...|+.
T Consensus 227 ~~~~~~~~~~i~~~l~~~p~~Rp~~~-~l~~~l~~ 260 (261)
T cd05034 227 PNCPEELYDLMLQCWDKDPEERPTFE-YLQSFLED 260 (261)
T ss_pred CCCCHHHHHHHHHHcccCcccCCCHH-HHHHHHhc
Confidence 22356789999999999999999998 67777763
No 219
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=8.4e-35 Score=319.83 Aligned_cols=255 Identities=27% Similarity=0.455 Sum_probs=201.4
Q ss_pred cCccccceeeecCceEEEEEEEC---------CeEEEEEEeccCCc-ccHHHHHHHHHHHhcC-CCCceeeEeccccC--
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML---------GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKL-QHPHLVTLLGACPE-- 521 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~---------g~~vAiK~l~~~~~-~~~~~f~~E~~il~~l-~HpnIV~l~g~~~~-- 521 (801)
.+|...+.||+|+||.||++... +..||+|.+..... .....+.+|+.++.++ +||||++++++|.+
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 91 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence 46788889999999999999753 23689998875432 2345788999999999 89999999999854
Q ss_pred CcceeeecCCCCchhhhhhhcC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeec
Q 003703 522 AWSLVYEYLPNGSLQDRLFRKS-------------NVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLD 588 (801)
Q Consensus 522 ~~~LV~E~~~~gsL~~~L~~~~-------------~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd 588 (801)
..+++|||+++|+|.+++.... ....++|..++.++.|++.||.|||..+ |+||||||+|||++
T Consensus 92 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g---ivH~dlkp~Nill~ 168 (334)
T cd05100 92 PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQK---CIHRDLAARNVLVT 168 (334)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC---eeccccccceEEEc
Confidence 4689999999999999987542 1235889999999999999999999987 99999999999999
Q ss_pred CCCCeeeecccceeeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChh--H
Q 003703 589 SELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAG--E 665 (801)
Q Consensus 589 ~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~--~ 665 (801)
.++.+||+|||+++........ .......++..|+|||++.+..++.++|||||||++|||++ |..||.... .
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~ 244 (334)
T cd05100 169 EDNVMKIADFGLARDVHNIDYY----KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE 244 (334)
T ss_pred CCCcEEECCcccceeccccccc----ccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence 9999999999999876432211 11223345678999999999999999999999999999998 889986432 2
Q ss_pred HHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHHhhh
Q 003703 666 VRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHV 725 (801)
Q Consensus 666 ~~~~~~~g~~~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~l~~ 725 (801)
....+..+... ..+...+..+.+|+.+||+.+|.+||++. +++..|+.+..
T Consensus 245 ~~~~~~~~~~~--------~~~~~~~~~l~~li~~cl~~~p~~Rps~~-ell~~l~~~~~ 295 (334)
T cd05100 245 LFKLLKEGHRM--------DKPANCTHELYMIMRECWHAVPSQRPTFK-QLVEDLDRVLT 295 (334)
T ss_pred HHHHHHcCCCC--------CCCCCCCHHHHHHHHHHcccChhhCcCHH-HHHHHHHHHhh
Confidence 22333222211 12223456789999999999999999998 67778877654
No 220
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=9.2e-35 Score=307.34 Aligned_cols=249 Identities=28% Similarity=0.441 Sum_probs=200.3
Q ss_pred cCccccceeeecCceEEEEEEEC-CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccccC-CcceeeecCCC
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML-GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACPE-AWSLVYEYLPN 532 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~-g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~-~~~LV~E~~~~ 532 (801)
.+|...++||+|+||.||+|.+. +..+|+|.+.... .....|.+|+.++++++|+||+++++++.+ ..+++|||+++
T Consensus 6 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~v~e~~~~ 84 (260)
T cd05073 6 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAK 84 (260)
T ss_pred cceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcCCCeEEEEEeCCC
Confidence 56778889999999999999875 6779999886543 234568899999999999999999988754 46899999999
Q ss_pred CchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCC
Q 003703 533 GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLP 612 (801)
Q Consensus 533 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~ 612 (801)
|+|.+++.... ...+++..+..++.+++.||.|||+.+ ++|+||||+||+++.++.+||+|||++.........
T Consensus 85 ~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~-- 158 (260)
T cd05073 85 GSLLDFLKSDE-GSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT-- 158 (260)
T ss_pred CcHHHHHHhCC-ccccCHHHHHHHHHHHHHHHHHHHhCC---ccccccCcceEEEcCCCcEEECCCcceeeccCCCcc--
Confidence 99999987643 245789999999999999999999977 999999999999999999999999999876433211
Q ss_pred CccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChhH--HHHHhhcCccccccCCCCCCCCHH
Q 003703 613 SFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWPTF 689 (801)
Q Consensus 613 ~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~~--~~~~~~~g~~~~~~d~~~~~~~~~ 689 (801)
......++..|+|||++..+.++.++|||||||++|+|+| |..||..... ....+..+... ..+..
T Consensus 159 ---~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~--------~~~~~ 227 (260)
T cd05073 159 ---AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRM--------PRPEN 227 (260)
T ss_pred ---cccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCCC--------CCccc
Confidence 1223346778999999998889999999999999999999 9999964332 23333222111 11223
Q ss_pred HHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHH
Q 003703 690 VARRLVDLGLQCCELYGRERPDITPSLVKELEQ 722 (801)
Q Consensus 690 ~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~ 722 (801)
.+..+.+++.+||+.+|.+||++. .+...|+.
T Consensus 228 ~~~~~~~~i~~~l~~~p~~Rp~~~-~l~~~L~~ 259 (260)
T cd05073 228 CPEELYNIMMRCWKNRPEERPTFE-YIQSVLDD 259 (260)
T ss_pred CCHHHHHHHHHHcccCcccCcCHH-HHHHHHhc
Confidence 456789999999999999999998 77777764
No 221
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=4.8e-35 Score=312.79 Aligned_cols=246 Identities=24% Similarity=0.315 Sum_probs=197.7
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccccC--CcceeeecC
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYL 530 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E~~ 530 (801)
++|...+.||.|+||.||+|.+. +..||+|++..........|.+|+.++++++||||+++++++.. ..++||||+
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFC 84 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeecc
Confidence 45777788999999999999885 78999999976655556678999999999999999999998843 578999999
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCc
Q 003703 531 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLY 610 (801)
Q Consensus 531 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~ 610 (801)
++++|.+++.... ..+++..+..++.|++.||.|||+.+ |+|+||||+||+++.++.++|+|||++.......
T Consensus 85 ~~~~L~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~-- 157 (280)
T cd06611 85 DGGALDSIMLELE--RGLTEPQIRYVCRQMLEALNFLHSHK---VIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTL-- 157 (280)
T ss_pred CCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEECCCCCEEEccCccchhhcccc--
Confidence 9999999886543 36899999999999999999999988 9999999999999999999999999987653321
Q ss_pred CCCccccCCCCCCCCCCCccccc-----cCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHH--hhcCccccccCCCC
Q 003703 611 LPSFHRSTAPKGSFPYADPEYHR-----TGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRA--VSCGKLSSILDPLA 683 (801)
Q Consensus 611 ~~~~~~~~~~~Gt~~Y~APE~~~-----~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~--~~~g~~~~~~d~~~ 683 (801)
.......||+.|++||++. +..++.++|||||||++|+|++|++||......... +..+....
T Consensus 158 ----~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~------ 227 (280)
T cd06611 158 ----QKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPPT------ 227 (280)
T ss_pred ----cccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCCCC------
Confidence 1223456899999999874 345788999999999999999999999754432222 11111110
Q ss_pred CCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHH
Q 003703 684 GDWPTFVARRLVDLGLQCCELYGRERPDITPSLV 717 (801)
Q Consensus 684 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~ 717 (801)
...+...+..+.+++.+||+.+|.+||++.+.+.
T Consensus 228 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (280)
T cd06611 228 LDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLK 261 (280)
T ss_pred cCCcccCCHHHHHHHHHHhccChhhCcCHHHHhc
Confidence 1112234567889999999999999999985443
No 222
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-35 Score=316.79 Aligned_cols=241 Identities=25% Similarity=0.375 Sum_probs=204.8
Q ss_pred ccccceeeecCceEEEEEEE--CCeEEEEEEeccCCcccH--HHHHHHHHHHhcCCCCceeeEecccc--CCcceeeecC
Q 003703 457 FSESFKVGQGGFGCVYKGEM--LGRTVAIKMLYSHNMQGQ--LEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYL 530 (801)
Q Consensus 457 f~~~~~LG~G~fG~Vy~g~~--~g~~vAiK~l~~~~~~~~--~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~LV~E~~ 530 (801)
|...+.||+|.|+.|-++++ .|..||||++.+...... ..+.+|++.|..++|||||+||.+.. ..+|||+|+-
T Consensus 20 YDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLELG 99 (864)
T KOG4717|consen 20 YDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILELG 99 (864)
T ss_pred ehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEec
Confidence 55566799999999999876 599999999988766543 46889999999999999999999984 4689999999
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeee-cCCCCeeeecccceeeccCCCC
Q 003703 531 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILL-DSELSSKICDFGICRLVTEDTL 609 (801)
Q Consensus 531 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILL-d~~~~vKL~DFGla~~~~~~~~ 609 (801)
++|+|.|+|.++. ..+......+++.||+.|+.|+|..+ +|||||||+||.+ ..-|-|||.|||++..+.++.
T Consensus 100 D~GDl~DyImKHe--~Gl~E~La~kYF~QI~~AI~YCHqLH---VVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~- 173 (864)
T KOG4717|consen 100 DGGDLFDYIMKHE--EGLNEDLAKKYFAQIVHAISYCHQLH---VVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGK- 173 (864)
T ss_pred CCchHHHHHHhhh--ccccHHHHHHHHHHHHHHHHHHhhhh---hhcccCCcceeEEeeecCceEeeeccccccCCCcc-
Confidence 9999999998876 46888999999999999999999998 9999999999876 566899999999998876654
Q ss_pred cCCCccccCCCCCCCCCCCccccccCCCC-cchhHHhHHHHHHHHHhCCCCCCChhHHHHHhhcCccccccCCCCCCCCH
Q 003703 610 YLPSFHRSTAPKGSFPYADPEYHRTGVLT-PKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPT 688 (801)
Q Consensus 610 ~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s-~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~g~~~~~~d~~~~~~~~ 688 (801)
..+..+|++.|.|||++.+..|+ +++||||||||||-|++|++||...+... .+.-++|- ....|.
T Consensus 174 ------kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSE------TLTmImDC-KYtvPs 240 (864)
T KOG4717|consen 174 ------KLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSE------TLTMIMDC-KYTVPS 240 (864)
T ss_pred ------hhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchh------hhhhhhcc-cccCch
Confidence 34677899999999999999997 78999999999999999999997544322 22223332 234678
Q ss_pred HHHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 689 FVARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 689 ~~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
.++.+..+||..||..||++|.++.+++
T Consensus 241 hvS~eCrdLI~sMLvRdPkkRAslEeI~ 268 (864)
T KOG4717|consen 241 HVSKECRDLIQSMLVRDPKKRASLEEIV 268 (864)
T ss_pred hhhHHHHHHHHHHHhcCchhhccHHHHh
Confidence 8999999999999999999999988544
No 223
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=3e-35 Score=314.09 Aligned_cols=259 Identities=28% Similarity=0.438 Sum_probs=200.0
Q ss_pred CccccceeeecCceEEEEEEEC------CeEEEEEEeccCCcc-cHHHHHHHHHHHhcCCCCceeeEeccccC----Ccc
Q 003703 456 NFSESFKVGQGGFGCVYKGEML------GRTVAIKMLYSHNMQ-GQLEFQQEVRVLSKLQHPHLVTLLGACPE----AWS 524 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~------g~~vAiK~l~~~~~~-~~~~f~~E~~il~~l~HpnIV~l~g~~~~----~~~ 524 (801)
.|...+.||+|+||.||+|++. +..||||++...... ....|.+|+.++..++||||+++++++.. ..+
T Consensus 5 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05038 5 HLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLR 84 (284)
T ss_pred hchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceE
Confidence 4566678999999999999864 678999999765543 45679999999999999999999998854 478
Q ss_pred eeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeec
Q 003703 525 LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLV 604 (801)
Q Consensus 525 LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~ 604 (801)
+||||+++++|.+++.... ..+++..++.++.|++.||.|||+.+ |+|+||||+||+++.++.++|+|||++...
T Consensus 85 lv~e~~~~~~l~~~l~~~~--~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 159 (284)
T cd05038 85 LIMEYLPSGSLRDYLQRHR--DQINLKRLLLFSSQICKGMDYLGSQR---YIHRDLAARNILVESEDLVKISDFGLAKVL 159 (284)
T ss_pred EEEecCCCCCHHHHHHhCc--cccCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCCCCEEEccccccccc
Confidence 9999999999999997643 35899999999999999999999987 999999999999999999999999999877
Q ss_pred cCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHh--------hcCccc
Q 003703 605 TEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAV--------SCGKLS 676 (801)
Q Consensus 605 ~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~--------~~g~~~ 676 (801)
....... .......++..|++||++.+..++.++||||||+++|||+||+.|+.........+ ....+.
T Consensus 160 ~~~~~~~---~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd05038 160 PEDKDYY---YVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLL 236 (284)
T ss_pred ccCCcce---eccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHH
Confidence 5332111 11223345667999999988899999999999999999999999985322110000 000000
Q ss_pred cccCCC-CCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHHh
Q 003703 677 SILDPL-AGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 723 (801)
Q Consensus 677 ~~~d~~-~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~l 723 (801)
..+... ....+...+..+.+|+.+||+.+|.+||++. +++..|+.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~-ei~~~l~~i 283 (284)
T cd05038 237 ELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFA-DLILIVDRL 283 (284)
T ss_pred HHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHH-HHHHHHhhc
Confidence 001000 0111223346799999999999999999999 787887754
No 224
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=5.9e-35 Score=307.51 Aligned_cols=232 Identities=30% Similarity=0.454 Sum_probs=184.7
Q ss_pred eeeecCceEEEEEEECC------------eEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEecccc-CCcceeee
Q 003703 462 KVGQGGFGCVYKGEMLG------------RTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP-EAWSLVYE 528 (801)
Q Consensus 462 ~LG~G~fG~Vy~g~~~g------------~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~-~~~~LV~E 528 (801)
.||+|+||.||+|.+.+ ..|++|.+...... ...|.+|+.+++.++||||++++|+|. ...++|||
T Consensus 2 ~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv~e 80 (259)
T cd05037 2 HLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVRDENIMVEE 80 (259)
T ss_pred cccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEecCCcEEEEE
Confidence 59999999999998863 24888887654433 567899999999999999999999874 45789999
Q ss_pred cCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCC-------Ceeeecccce
Q 003703 529 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSEL-------SSKICDFGIC 601 (801)
Q Consensus 529 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~-------~vKL~DFGla 601 (801)
|+++|+|.+++.... ..+++..++.++.||+.||.|||+.+ |+||||||+|||++.++ .+||+|||++
T Consensus 81 ~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a 155 (259)
T cd05037 81 YVKFGPLDVFLHREK--NNVSLHWKLDVAKQLASALHYLEDKK---LVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIP 155 (259)
T ss_pred cCCCCcHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhhCC---eecccCccceEEEecCccccCCceeEEeCCCCcc
Confidence 999999999987654 26889999999999999999999987 99999999999999888 7999999998
Q ss_pred eeccCCCCcCCCccccCCCCCCCCCCCccccccC--CCCcchhHHhHHHHHHHHHh-CCCCCCChhHH--HHHhhcCccc
Q 003703 602 RLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTG--VLTPKSDSYSFGLIILQLLT-GRLPVGLAGEV--RRAVSCGKLS 676 (801)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~--~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~--~~~~~~g~~~ 676 (801)
..... .....++..|+|||++... .++.++|||||||++|+|++ |..||...... ...+....
T Consensus 156 ~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~~~~-- 223 (259)
T cd05037 156 ITVLS----------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQDQH-- 223 (259)
T ss_pred ccccc----------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHhcCC--
Confidence 86543 1234577889999998776 78999999999999999999 57787543211 11111110
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHH
Q 003703 677 SILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKEL 720 (801)
Q Consensus 677 ~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L 720 (801)
..+......+.+++.+||..+|.+||++. ++++.|
T Consensus 224 --------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~-~il~~l 258 (259)
T cd05037 224 --------RLPMPDCAELANLINQCWTYDPTKRPSFR-AILRDL 258 (259)
T ss_pred --------CCCCCCchHHHHHHHHHhccChhhCCCHH-HHHHhc
Confidence 01111126889999999999999999998 454443
No 225
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=2.8e-35 Score=324.71 Aligned_cols=250 Identities=22% Similarity=0.286 Sum_probs=190.6
Q ss_pred HHhcCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEeccccC------
Q 003703 452 TATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACPE------ 521 (801)
Q Consensus 452 ~at~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~--~~~~~f~~E~~il~~l~HpnIV~l~g~~~~------ 521 (801)
...++|.....||.|+||.||+|... +..||||++..... .....+.+|+.+|..++||||+++++++..
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN 91 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence 34567888899999999999999874 78999999865432 233457789999999999999999988732
Q ss_pred --CcceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeeccc
Q 003703 522 --AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFG 599 (801)
Q Consensus 522 --~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFG 599 (801)
..+++++++ +++|.+++.. ..+++..+..|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||
T Consensus 92 ~~~~~~~~~~~-~~~l~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrdikp~Nil~~~~~~~kl~Dfg 163 (343)
T cd07878 92 FNEVYLVTNLM-GADLNNIVKC----QKLSDEHVQFLIYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFG 163 (343)
T ss_pred cCcEEEEeecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecccCChhhEEECCCCCEEEcCCc
Confidence 257899987 8899887743 35889999999999999999999988 9999999999999999999999999
Q ss_pred ceeeccCCCCcCCCccccCCCCCCCCCCCcccccc-CCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHH---hh-cCc
Q 003703 600 ICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRA---VS-CGK 674 (801)
Q Consensus 600 la~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~-~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~---~~-~g~ 674 (801)
+++..... .....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||...+..... .. .+.
T Consensus 164 ~~~~~~~~---------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 234 (343)
T cd07878 164 LARQADDE---------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGT 234 (343)
T ss_pred cceecCCC---------cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCC
Confidence 99875432 234568999999999876 57899999999999999999999999643321110 00 000
Q ss_pred -cccccC-----------CCCCCCC--------HHHHHHHHHHHHHhhhhCCCCCCCchHHHHH
Q 003703 675 -LSSILD-----------PLAGDWP--------TFVARRLVDLGLQCCELYGRERPDITPSLVK 718 (801)
Q Consensus 675 -~~~~~d-----------~~~~~~~--------~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~ 718 (801)
....+. ......+ ......+.+|+.+||+.||.+|||+.+.+.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 235 PSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred CCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000000 0000011 0123457899999999999999999865543
No 226
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-36 Score=300.43 Aligned_cols=246 Identities=25% Similarity=0.384 Sum_probs=200.9
Q ss_pred hcCccccceeeecCceEEEEEEEC--CeEEEEEEeccCC--cccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccceee
Q 003703 454 TCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHN--MQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVY 527 (801)
Q Consensus 454 t~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~--~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~ 527 (801)
+++|+.-..||+|.|+.||+.... |+.+|+|+++... ..+-+.+.+|+.|-..|+|||||+|.....+ ..+||+
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF 89 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 89 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence 345666667999999999998664 8899999875443 2345578899999999999999999988754 478999
Q ss_pred ecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecC---CCCeeeecccceeec
Q 003703 528 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDS---ELSSKICDFGICRLV 604 (801)
Q Consensus 528 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~---~~~vKL~DFGla~~~ 604 (801)
|+|.|++|..-+..+ -.++...+-..+.||+.||.|+|.++ |||||+||.|+||-. .--+||+|||+|..+
T Consensus 90 e~m~G~dl~~eIV~R---~~ySEa~aSH~~rQiLeal~yCH~n~---IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l 163 (355)
T KOG0033|consen 90 DLVTGGELFEDIVAR---EFYSEADASHCIQQILEALAYCHSNG---IVHRDLKPENLLLASKAKGAAVKLADFGLAIEV 163 (355)
T ss_pred ecccchHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHhcC---ceeccCChhheeeeeccCCCceeecccceEEEe
Confidence 999999997655443 23555677788999999999999998 999999999999953 345999999999998
Q ss_pred cCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCC--hhHHHHHhhcCccccccCCC
Q 003703 605 TEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGL--AGEVRRAVSCGKLSSILDPL 682 (801)
Q Consensus 605 ~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~--~~~~~~~~~~g~~~~~~d~~ 682 (801)
..+. .....+|||+|||||++...+|+..+|||+.|||||-||.|++||.. ...+.+.+..|.. |-.
T Consensus 164 ~~g~-------~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~y----d~~ 232 (355)
T KOG0033|consen 164 NDGE-------AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAY----DYP 232 (355)
T ss_pred CCcc-------ccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhcccc----CCC
Confidence 7433 34677899999999999999999999999999999999999999975 3346666666654 222
Q ss_pred CCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHH
Q 003703 683 AGDWPTFVARRLVDLGLQCCELYGRERPDITPSLV 717 (801)
Q Consensus 683 ~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~ 717 (801)
...|+. ++++..+|+.+||..||.+|.|..+.+-
T Consensus 233 ~~~w~~-is~~Ak~LvrrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 233 SPEWDT-VTPEAKSLIRRMLTVNPKKRITADEALK 266 (355)
T ss_pred CcccCc-CCHHHHHHHHHHhccChhhhccHHHHhC
Confidence 335553 6778999999999999999999986553
No 227
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=5.3e-35 Score=321.25 Aligned_cols=247 Identities=25% Similarity=0.287 Sum_probs=188.1
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccceee
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVY 527 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~---~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~ 527 (801)
++|...+.||+|+||.||+++.. +..||+|++..... .....|.+|+.++..++||||++++++|.+ ..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 36788889999999999999885 78999999865322 223458899999999999999999998854 478999
Q ss_pred ecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCC
Q 003703 528 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 607 (801)
Q Consensus 528 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~ 607 (801)
||+++|+|.+++.... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++..+...
T Consensus 81 e~~~g~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 155 (331)
T cd05597 81 DYYVGGDLLTLLSKFE--DRLPEDMARFYLAEMVLAIDSVHQLG---YVHRDIKPDNVLLDKNGHIRLADFGSCLRLLAD 155 (331)
T ss_pred ecCCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eEECCCCHHHEEECCCCCEEEEECCceeecCCC
Confidence 9999999999986533 35788999999999999999999988 999999999999999999999999999776433
Q ss_pred CCcCCCccccCCCCCCCCCCCcccccc-----CCCCcchhHHhHHHHHHHHHhCCCCCCChhHH--HHHhhcC-cccccc
Q 003703 608 TLYLPSFHRSTAPKGSFPYADPEYHRT-----GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEV--RRAVSCG-KLSSIL 679 (801)
Q Consensus 608 ~~~~~~~~~~~~~~Gt~~Y~APE~~~~-----~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~--~~~~~~g-~~~~~~ 679 (801)
... ......||+.|+|||++.. ..++.++|||||||++|+|++|+.||...... ...+... .... +
T Consensus 156 ~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~-~ 229 (331)
T cd05597 156 GTV-----QSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQ-F 229 (331)
T ss_pred CCc-----cccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCccc-C
Confidence 211 1233569999999999863 46788999999999999999999999643321 1112111 1111 0
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhhhCC--CCCCCchHHH
Q 003703 680 DPLAGDWPTFVARRLVDLGLQCCELYG--RERPDITPSL 716 (801)
Q Consensus 680 d~~~~~~~~~~~~~l~~Li~~Cl~~dP--~~RPt~~e~l 716 (801)
.+ .....+..+.+++.+|+..++ ..||++.+.+
T Consensus 230 ~~----~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l 264 (331)
T cd05597 230 PP----DVTDVSEEAKDLIRRLICSPETRLGRNGLQDFK 264 (331)
T ss_pred CC----ccCCCCHHHHHHHHHHccCcccccCCCCHHHHh
Confidence 11 111245577888888775433 3367776433
No 228
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=1.3e-34 Score=309.52 Aligned_cols=252 Identities=27% Similarity=0.448 Sum_probs=200.8
Q ss_pred cCccccceeeecCceEEEEEEEC--C----eEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEecccc-CCccee
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--G----RTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACP-EAWSLV 526 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g----~~vAiK~l~~~~~-~~~~~f~~E~~il~~l~HpnIV~l~g~~~-~~~~LV 526 (801)
.+|...+.||+|+||.||+|.+. | ..||+|.+..... .....+.+|+.++.+++||||++++++|. ...++|
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~v 86 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLSSQVQLI 86 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCceEEE
Confidence 35666788999999999999864 3 3689998876543 23456889999999999999999999885 457899
Q ss_pred eecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccC
Q 003703 527 YEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTE 606 (801)
Q Consensus 527 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~ 606 (801)
|||+++|+|.+++.... ..+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 87 ~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~ 161 (279)
T cd05057 87 TQLMPLGCLLDYVRNHK--DNIGSQYLLNWCVQIAKGMSYLEEKR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLDV 161 (279)
T ss_pred EecCCCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhCC---EEecccCcceEEEcCCCeEEECCCcccccccC
Confidence 99999999999987653 35899999999999999999999977 99999999999999999999999999987653
Q ss_pred CCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChh--HHHHHhhcCccccccCCCC
Q 003703 607 DTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAG--EVRRAVSCGKLSSILDPLA 683 (801)
Q Consensus 607 ~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~--~~~~~~~~g~~~~~~d~~~ 683 (801)
..... ......+++.|+|||.+....++.++|||||||++|||+| |+.||.... .+...+..+...
T Consensus 162 ~~~~~----~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~------- 230 (279)
T cd05057 162 DEKEY----HAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGERL------- 230 (279)
T ss_pred cccce----ecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCCCCC-------
Confidence 32111 1122334678999999988899999999999999999999 999997433 233333332211
Q ss_pred CCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHHhh
Q 003703 684 GDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLH 724 (801)
Q Consensus 684 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~l~ 724 (801)
..+...+..+.+++.+||..+|..||++. .+...|..+.
T Consensus 231 -~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~-~l~~~l~~~~ 269 (279)
T cd05057 231 -PQPPICTIDVYMVLVKCWMIDAESRPTFK-ELINEFSKMA 269 (279)
T ss_pred -CCCCCCCHHHHHHHHHHcCCChhhCCCHH-HHHHHHHHHH
Confidence 11222345788999999999999999999 6888887763
No 229
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=5.2e-35 Score=312.17 Aligned_cols=242 Identities=27% Similarity=0.387 Sum_probs=195.6
Q ss_pred ccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEeccccC--CcceeeecCC
Q 003703 457 FSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYLP 531 (801)
Q Consensus 457 f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~-~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E~~~ 531 (801)
|...+.||+|+||.||+|.+. +..||+|.+..... .....+.+|+.++++++||||++++++|.. ..++||||++
T Consensus 6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06642 6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLG 85 (277)
T ss_pred HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccC
Confidence 555567999999999999874 78999999875443 333468899999999999999999998843 4789999999
Q ss_pred CCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcC
Q 003703 532 NGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYL 611 (801)
Q Consensus 532 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~ 611 (801)
+++|.+++.. ..+++..+..++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++..+.....
T Consensus 86 ~~~L~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~---ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~-- 156 (277)
T cd06642 86 GGSALDLLKP----GPLEETYIATILREILKGLDYLHSER---KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI-- 156 (277)
T ss_pred CCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHhcCC---eeccCCChheEEEeCCCCEEEccccccccccCcch--
Confidence 9999998853 35889999999999999999999987 99999999999999999999999999987643221
Q ss_pred CCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHH--HHhhcCccccccCCCCCCCCHH
Q 003703 612 PSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVR--RAVSCGKLSSILDPLAGDWPTF 689 (801)
Q Consensus 612 ~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~--~~~~~g~~~~~~d~~~~~~~~~ 689 (801)
......|+..|+|||++.+..++.++|||||||++|||+||+.||....... ..+..+ .....+..
T Consensus 157 ----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~--------~~~~~~~~ 224 (277)
T cd06642 157 ----KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKN--------SPPTLEGQ 224 (277)
T ss_pred ----hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcC--------CCCCCCcc
Confidence 1233468899999999999899999999999999999999999986432211 111111 11122334
Q ss_pred HHHHHHHHHHHhhhhCCCCCCCchHHHHHH
Q 003703 690 VARRLVDLGLQCCELYGRERPDITPSLVKE 719 (801)
Q Consensus 690 ~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~ 719 (801)
.+..+.+++.+||+.+|.+||++.+.+.+.
T Consensus 225 ~~~~~~~li~~~l~~~p~~Rp~~~~il~~~ 254 (277)
T cd06642 225 YSKPFKEFVEACLNKDPRFRPTAKELLKHK 254 (277)
T ss_pred cCHHHHHHHHHHccCCcccCcCHHHHHHhH
Confidence 566789999999999999999999766554
No 230
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=1.7e-35 Score=312.82 Aligned_cols=235 Identities=25% Similarity=0.381 Sum_probs=184.4
Q ss_pred eeeecCceEEEEEEEC---------CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEecccc--CCcceeeecC
Q 003703 462 KVGQGGFGCVYKGEML---------GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYL 530 (801)
Q Consensus 462 ~LG~G~fG~Vy~g~~~---------g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~LV~E~~ 530 (801)
.||.|+||.||+|... ...||+|.+..........|.+|+.++..++||||+++++++. ...++||||+
T Consensus 2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~ 81 (258)
T cd05078 2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYV 81 (258)
T ss_pred CCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEecC
Confidence 5999999999999764 2348889886655455567889999999999999999999984 4678999999
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCC--------eeeeccccee
Q 003703 531 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELS--------SKICDFGICR 602 (801)
Q Consensus 531 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~--------vKL~DFGla~ 602 (801)
++|+|.+++.... ..+++..++.++.||+.||.|||+.+ |+||||||+|||++.++. ++++|||++.
T Consensus 82 ~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~---iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~ 156 (258)
T cd05078 82 KFGSLDTYLKKNK--NLINISWKLEVAKQLAWALHFLEDKG---LTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISI 156 (258)
T ss_pred CCCcHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceEEEecccccccCCCceEEeccccccc
Confidence 9999999987654 36889999999999999999999987 999999999999987765 5899999876
Q ss_pred eccCCCCcCCCccccCCCCCCCCCCCcccccc-CCCCcchhHHhHHHHHHHHHhCC-CCCCChhHHHHHhhcCccccccC
Q 003703 603 LVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGR-LPVGLAGEVRRAVSCGKLSSILD 680 (801)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~-~~~s~ksDVwSlGvvL~ELltG~-~Pf~~~~~~~~~~~~g~~~~~~d 680 (801)
.... .....|++.|+|||++.+ ..++.++|||||||++|+|++|. +||..............
T Consensus 157 ~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~~~~------ 220 (258)
T cd05078 157 TVLP----------KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQFYED------ 220 (258)
T ss_pred ccCC----------chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHHHHc------
Confidence 5432 123468889999999876 45899999999999999999984 66654332211111111
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHH
Q 003703 681 PLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKEL 720 (801)
Q Consensus 681 ~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L 720 (801)
....|......+.+|+.+||+.+|.+||++. ++++.|
T Consensus 221 --~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~-~il~~l 257 (258)
T cd05078 221 --RHQLPAPKWTELANLINQCMDYEPDFRPSFR-AIIRDL 257 (258)
T ss_pred --cccCCCCCcHHHHHHHHHHhccChhhCCCHH-HHHHhc
Confidence 0112222345789999999999999999999 455544
No 231
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=1.4e-34 Score=304.53 Aligned_cols=245 Identities=29% Similarity=0.550 Sum_probs=195.8
Q ss_pred CccccceeeecCceEEEEEEEC-CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccccC--CcceeeecCCC
Q 003703 456 NFSESFKVGQGGFGCVYKGEML-GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYLPN 532 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~-g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E~~~~ 532 (801)
+|...+.||.|+||.||+|.+. +..+|+|.+..... ....|.+|+.++.+++|||++++++++.. ..++||||+++
T Consensus 5 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~ 83 (256)
T cd05112 5 ELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM-SEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEH 83 (256)
T ss_pred HeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCC-CHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCC
Confidence 5666788999999999999876 78899998865433 34568899999999999999999999843 57899999999
Q ss_pred CchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCC
Q 003703 533 GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLP 612 (801)
Q Consensus 533 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~ 612 (801)
|+|.+++.... ..+++..+..++.+++.||.|||+.+ ++|+||||+||+++.++.+||+|||++........
T Consensus 84 ~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~--- 155 (256)
T cd05112 84 GCLSDYLRAQR--GKFSQETLLGMCLDVCEGMAYLESSN---VIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQY--- 155 (256)
T ss_pred CcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccccceEEEcCCCeEEECCCcceeecccCcc---
Confidence 99999886543 35789999999999999999999987 99999999999999999999999999986643321
Q ss_pred CccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChh--HHHHHhhcCccccccCCCCCCCCHH
Q 003703 613 SFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAG--EVRRAVSCGKLSSILDPLAGDWPTF 689 (801)
Q Consensus 613 ~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~--~~~~~~~~g~~~~~~d~~~~~~~~~ 689 (801)
.......++.+|+|||++.++.++.++|||||||++|||++ |..||.... .....+..+. .... +..
T Consensus 156 --~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~--~~~~------~~~ 225 (256)
T cd05112 156 --TSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGF--RLYK------PRL 225 (256)
T ss_pred --cccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCC--CCCC------CCC
Confidence 11223345678999999998899999999999999999998 999996433 2222222221 1111 122
Q ss_pred HHHHHHHHHHHhhhhCCCCCCCchHHHHHHH
Q 003703 690 VARRLVDLGLQCCELYGRERPDITPSLVKEL 720 (801)
Q Consensus 690 ~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L 720 (801)
.+..+.+|+.+||+.+|.+||++. ++++.|
T Consensus 226 ~~~~~~~l~~~~l~~~p~~Rp~~~-~~l~~l 255 (256)
T cd05112 226 ASQSVYELMQHCWKERPEDRPSFS-LLLHQL 255 (256)
T ss_pred CCHHHHHHHHHHcccChhhCCCHH-HHHHhh
Confidence 346799999999999999999998 455443
No 232
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=1.1e-34 Score=307.90 Aligned_cols=247 Identities=26% Similarity=0.386 Sum_probs=193.9
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc-----ccHHHHHHHHHHHhcCCCCceeeEeccccC----Cc
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM-----QGQLEFQQEVRVLSKLQHPHLVTLLGACPE----AW 523 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~-----~~~~~f~~E~~il~~l~HpnIV~l~g~~~~----~~ 523 (801)
.+|.....||+|+||.||+|... |..||+|.+..... .....+.+|+.++..++||||+++++++.+ ..
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 47888899999999999999874 78999998865432 223458899999999999999999998743 35
Q ss_pred ceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceee
Q 003703 524 SLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRL 603 (801)
Q Consensus 524 ~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~ 603 (801)
+++|||+++++|.+++.... .+++...+.++.|++.||.|||+.+ |+||||+|+||+++.++.+||+|||+++.
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~LH~~~---i~H~~l~p~nil~~~~~~~~l~dfg~~~~ 155 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYG---ALTESVTRKYTRQILEGMSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKR 155 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEccCCCccc
Confidence 78999999999999986543 4788999999999999999999987 99999999999999999999999999986
Q ss_pred ccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhhcCccccccCCCC
Q 003703 604 VTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLA 683 (801)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~g~~~~~~d~~~ 683 (801)
........ .......|+..|+|||++.+..++.++|||||||++|||++|+.||.............. .+..
T Consensus 156 ~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~-----~~~~ 227 (266)
T cd06651 156 LQTICMSG---TGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIAT-----QPTN 227 (266)
T ss_pred cccccccC---CccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhc-----CCCC
Confidence 54321110 011234689999999999988899999999999999999999999975433222111110 1112
Q ss_pred CCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 684 GDWPTFVARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 684 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
...+......+..++ +||..+|.+||++.+.+
T Consensus 228 ~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil 259 (266)
T cd06651 228 PQLPSHISEHARDFL-GCIFVEARHRPSAEELL 259 (266)
T ss_pred CCCchhcCHHHHHHH-HHhcCChhhCcCHHHHh
Confidence 233444556667776 78889999999998544
No 233
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-36 Score=346.77 Aligned_cols=247 Identities=27% Similarity=0.325 Sum_probs=201.0
Q ss_pred HHHHHHHhcCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcc---cHHHHHHHHHHHhcCCCCceeeEeccccC
Q 003703 447 LADLQTATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ---GQLEFQQEVRVLSKLQHPHLVTLLGACPE 521 (801)
Q Consensus 447 ~~el~~at~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~---~~~~f~~E~~il~~l~HpnIV~l~g~~~~ 521 (801)
+.+++.-..+|.+.++||+|+||.|..++.. ++.||+|++++..+- ...-|..|.++|.--+.++||+|+.+|.+
T Consensus 67 v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD 146 (1317)
T KOG0612|consen 67 VKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQD 146 (1317)
T ss_pred HHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcC
Confidence 3455555678888899999999999999886 789999999885443 33458999999999999999999999965
Q ss_pred --CcceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeeccc
Q 003703 522 --AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFG 599 (801)
Q Consensus 522 --~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFG 599 (801)
++|||||||+||+|..+|.+.. .++...+..++..|+.||.-||+.| +|||||||+|||||..|++||+|||
T Consensus 147 ~~~LYlVMdY~pGGDlltLlSk~~---~~pE~~ArFY~aEiVlAldslH~mg---yVHRDiKPDNvLld~~GHikLADFG 220 (1317)
T KOG0612|consen 147 ERYLYLVMDYMPGGDLLTLLSKFD---RLPEDWARFYTAEIVLALDSLHSMG---YVHRDIKPDNVLLDKSGHIKLADFG 220 (1317)
T ss_pred ccceEEEEecccCchHHHHHhhcC---CChHHHHHHHHHHHHHHHHHHHhcc---ceeccCCcceeEecccCcEeeccch
Confidence 5889999999999999997654 6888889999999999999999999 9999999999999999999999999
Q ss_pred ceeeccCCCCcCCCccccCCCCCCCCCCCccccc----c-CCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhhcCc
Q 003703 600 ICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHR----T-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGK 674 (801)
Q Consensus 600 la~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~----~-~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~g~ 674 (801)
.|-.+..++.. .....+|||.|++||++. + +.|++.|||||+||++||||.|..||....-+..
T Consensus 221 sClkm~~dG~V-----~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveT------ 289 (1317)
T KOG0612|consen 221 SCLKMDADGTV-----RSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVET------ 289 (1317)
T ss_pred hHHhcCCCCcE-----EeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHH------
Confidence 99888755432 456789999999999884 2 6799999999999999999999999964333322
Q ss_pred cccccCCC-CCCCC--HHHHHHHHHHHHHhhhhCCCCCCC
Q 003703 675 LSSILDPL-AGDWP--TFVARRLVDLGLQCCELYGRERPD 711 (801)
Q Consensus 675 ~~~~~d~~-~~~~~--~~~~~~l~~Li~~Cl~~dP~~RPt 711 (801)
+..|++.. .-.+| ..++....+||.+.+. +|..|-.
T Consensus 290 Y~KIm~hk~~l~FP~~~~VSeeakdLI~~ll~-~~e~RLg 328 (1317)
T KOG0612|consen 290 YGKIMNHKESLSFPDETDVSEEAKDLIEALLC-DREVRLG 328 (1317)
T ss_pred HHHHhchhhhcCCCcccccCHHHHHHHHHHhc-Chhhhcc
Confidence 12222221 12344 3477788888888775 5666665
No 234
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=8e-35 Score=308.75 Aligned_cols=244 Identities=28% Similarity=0.453 Sum_probs=193.4
Q ss_pred eeeecCceEEEEEEECC--------eEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEecccc--CCcceeeecC
Q 003703 462 KVGQGGFGCVYKGEMLG--------RTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYL 530 (801)
Q Consensus 462 ~LG~G~fG~Vy~g~~~g--------~~vAiK~l~~~~~-~~~~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~LV~E~~ 530 (801)
.||+|+||.||+|+... ..||||.+..... .....|.+|+.+++.++||||++++++|. +..++||||+
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELM 81 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEecc
Confidence 59999999999998742 5799998865432 34557889999999999999999999884 3578999999
Q ss_pred CCCchhhhhhhcC----CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCC-----Ceeeecccce
Q 003703 531 PNGSLQDRLFRKS----NVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSEL-----SSKICDFGIC 601 (801)
Q Consensus 531 ~~gsL~~~L~~~~----~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~-----~vKL~DFGla 601 (801)
++|+|.+++.... ....++|..++.++.+++.||.|||+.+ ++|+||||+||+++.++ .++|+|||++
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~ 158 (269)
T cd05044 82 EGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMH---FIHRDLAARNCLVSEKGYDADRVVKIGDFGLA 158 (269)
T ss_pred CCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCC---cccCCCChheEEEecCCCCCCcceEECCcccc
Confidence 9999999987532 2234789999999999999999999987 99999999999999887 8999999999
Q ss_pred eeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChhHH--HHHhhcCccccc
Q 003703 602 RLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGEV--RRAVSCGKLSSI 678 (801)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~--~~~~~~g~~~~~ 678 (801)
+........ .......++..|+|||++.++.++.++|||||||++|||+| |..||...... ...+..+.
T Consensus 159 ~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~---- 230 (269)
T cd05044 159 RDIYKSDYY----RKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAGG---- 230 (269)
T ss_pred ccccccccc----ccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcCC----
Confidence 866433211 11233456789999999999999999999999999999998 99998643322 22222111
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHH
Q 003703 679 LDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELE 721 (801)
Q Consensus 679 ~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~ 721 (801)
....+...+..+.+++.+||..+|.+||++. .+.+.|+
T Consensus 231 ----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~-~i~~~l~ 268 (269)
T cd05044 231 ----RLQKPENCPDKIYQLMTNCWAQDPSERPTFD-RIQEILQ 268 (269)
T ss_pred ----ccCCcccchHHHHHHHHHHcCCCcccCCCHH-HHHHHHh
Confidence 1122334567889999999999999999998 6766664
No 235
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=7.3e-35 Score=311.69 Aligned_cols=255 Identities=26% Similarity=0.360 Sum_probs=200.2
Q ss_pred cCHHHHHHHhcCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcccHHHHHHHHHHHhcC-CCCceeeEecccc-
Q 003703 445 FSLADLQTATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKL-QHPHLVTLLGACP- 520 (801)
Q Consensus 445 ~~~~el~~at~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~~~~f~~E~~il~~l-~HpnIV~l~g~~~- 520 (801)
.++.++....+.|.....||.|+||.||+|... +..||+|++.... .....+..|+.++.++ +||||+++++++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 84 (282)
T cd06636 6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIK 84 (282)
T ss_pred hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhc
Confidence 456666677788999999999999999999884 7899999986543 2345688899999998 7999999999873
Q ss_pred -------CCcceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCe
Q 003703 521 -------EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSS 593 (801)
Q Consensus 521 -------~~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~v 593 (801)
...+++|||+++|+|.+++..... ..+++..+..++.||+.||.|||+.+ |+|+||+|+||+++.++.+
T Consensus 85 ~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~~~---ivH~dl~~~nili~~~~~~ 160 (282)
T cd06636 85 KSPPGHDDQLWLVMEFCGAGSVTDLVKNTKG-NALKEDWIAYICREILRGLAHLHAHK---VIHRDIKGQNVLLTENAEV 160 (282)
T ss_pred ccccCCCCEEEEEEEeCCCCcHHHHHHHccC-CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCE
Confidence 236899999999999998865432 45788889999999999999999988 9999999999999999999
Q ss_pred eeecccceeeccCCCCcCCCccccCCCCCCCCCCCccccc-----cCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHH
Q 003703 594 KICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHR-----TGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRR 668 (801)
Q Consensus 594 KL~DFGla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~-----~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~ 668 (801)
+|+|||++....... .......|++.|+|||++. ...++.++|||||||++|||++|..||........
T Consensus 161 ~l~dfg~~~~~~~~~------~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~ 234 (282)
T cd06636 161 KLVDFGVSAQLDRTV------GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRA 234 (282)
T ss_pred EEeeCcchhhhhccc------cCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhh
Confidence 999999987654221 1123456899999999875 35688899999999999999999999964433222
Q ss_pred HhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHH
Q 003703 669 AVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPS 715 (801)
Q Consensus 669 ~~~~g~~~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~ 715 (801)
....... ..+ .......+..+.+|+.+||+.||.+||++.+.
T Consensus 235 ~~~~~~~---~~~--~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~el 276 (282)
T cd06636 235 LFLIPRN---PPP--KLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQL 276 (282)
T ss_pred hhhHhhC---CCC--CCcccccCHHHHHHHHHHhCCChhhCcCHHHH
Confidence 2111110 001 01112345689999999999999999998843
No 236
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=1.1e-34 Score=312.06 Aligned_cols=256 Identities=26% Similarity=0.327 Sum_probs=202.7
Q ss_pred cCHHHHHHHhcCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcccHHHHHHHHHHHhcC-CCCceeeEeccccC
Q 003703 445 FSLADLQTATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKL-QHPHLVTLLGACPE 521 (801)
Q Consensus 445 ~~~~el~~at~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~~~~f~~E~~il~~l-~HpnIV~l~g~~~~ 521 (801)
+.+.++..++++|.....||+|+||.||++... ++.+|+|++.... .....+.+|+.++.++ +|||+++++++|..
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~ 90 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYK 90 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence 566777788999999999999999999999884 8899999986532 2234677899999999 89999999998732
Q ss_pred -------CcceeeecCCCCchhhhhhhc-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCe
Q 003703 522 -------AWSLVYEYLPNGSLQDRLFRK-SNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSS 593 (801)
Q Consensus 522 -------~~~LV~E~~~~gsL~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~v 593 (801)
..++||||+++|+|.+++... .....+++..+..++.|++.||.|||+.+ |+|+||||+||+++.++.+
T Consensus 91 ~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~nili~~~~~~ 167 (291)
T cd06639 91 ADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNR---IIHRDVKGNNILLTTEGGV 167 (291)
T ss_pred ccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEEcCCCCE
Confidence 368999999999999988642 22346899999999999999999999987 9999999999999999999
Q ss_pred eeecccceeeccCCCCcCCCccccCCCCCCCCCCCccccccC-----CCCcchhHHhHHHHHHHHHhCCCCCCChhHHHH
Q 003703 594 KICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTG-----VLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRR 668 (801)
Q Consensus 594 KL~DFGla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~-----~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~ 668 (801)
||+|||++........ ......|++.|+|||++... .++.++|||||||++|||++|++||........
T Consensus 168 kl~dfg~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~ 241 (291)
T cd06639 168 KLVDFGVSAQLTSTRL------RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKT 241 (291)
T ss_pred EEeecccchhcccccc------cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHH
Confidence 9999999886643221 12345689999999987543 368999999999999999999999975443222
Q ss_pred Hh--hcCccccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 669 AV--SCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 669 ~~--~~g~~~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
.. ..+....+. .+......+.+|+.+||+.+|.+||++.+.+
T Consensus 242 ~~~~~~~~~~~~~------~~~~~~~~l~~li~~~l~~~p~~Rps~~~il 285 (291)
T cd06639 242 LFKIPRNPPPTLL------HPEKWCRSFNHFISQCLIKDFEARPSVTHLL 285 (291)
T ss_pred HHHHhcCCCCCCC------cccccCHHHHHHHHHHhhcChhhCcCHHHHh
Confidence 21 111111111 1223445799999999999999999998544
No 237
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=5e-35 Score=315.62 Aligned_cols=245 Identities=21% Similarity=0.303 Sum_probs=194.6
Q ss_pred cceeeecCceEEEEEEEC--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEecccc--CCcceeeecCCCCch
Q 003703 460 SFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYLPNGSL 535 (801)
Q Consensus 460 ~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~LV~E~~~~gsL 535 (801)
...||+|+||.||++... +..||||.+..........+.+|+.++..++||||+++++.+. +..++||||+++++|
T Consensus 27 ~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L 106 (292)
T cd06658 27 FIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGAL 106 (292)
T ss_pred hhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcH
Confidence 356999999999999874 7899999987655555567889999999999999999999874 457899999999999
Q ss_pred hhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCCCcc
Q 003703 536 QDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFH 615 (801)
Q Consensus 536 ~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~~~~ 615 (801)
.+++.. ..+++..+..++.+|+.||.|||+.+ |+||||||+||+++.++.+||+|||++........
T Consensus 107 ~~~~~~----~~l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~------ 173 (292)
T cd06658 107 TDIVTH----TRMNEEQIATVCLSVLRALSYLHNQG---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP------ 173 (292)
T ss_pred HHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCEEEccCcchhhcccccc------
Confidence 998743 24788999999999999999999987 99999999999999999999999999876543221
Q ss_pred ccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhhcCccccccCCCCCCCCHHHHHHHH
Q 003703 616 RSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFVARRLV 695 (801)
Q Consensus 616 ~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~g~~~~~~d~~~~~~~~~~~~~l~ 695 (801)
......|++.|+|||++.+..++.++|||||||++|||++|+.||........... +...+.+... .....+..+.
T Consensus 174 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~ 249 (292)
T cd06658 174 KRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRR---IRDNLPPRVK-DSHKVSSVLR 249 (292)
T ss_pred cCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH---HHhcCCCccc-cccccCHHHH
Confidence 12345689999999999888999999999999999999999999964433211110 0011111111 1122455788
Q ss_pred HHHHHhhhhCCCCCCCchHHHHHHHH
Q 003703 696 DLGLQCCELYGRERPDITPSLVKELE 721 (801)
Q Consensus 696 ~Li~~Cl~~dP~~RPt~~e~l~~~L~ 721 (801)
.++.+||..+|.+|||+.+.+.+.+-
T Consensus 250 ~li~~~l~~~P~~Rpt~~~il~~~~~ 275 (292)
T cd06658 250 GFLDLMLVREPSQRATAQELLQHPFL 275 (292)
T ss_pred HHHHHHccCChhHCcCHHHHhhChhh
Confidence 99999999999999999866655443
No 238
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=7.9e-35 Score=316.81 Aligned_cols=193 Identities=25% Similarity=0.363 Sum_probs=156.9
Q ss_pred cceeeecCceEEEEEEEC----CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEecccc----CCcceeeecCC
Q 003703 460 SFKVGQGGFGCVYKGEML----GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP----EAWSLVYEYLP 531 (801)
Q Consensus 460 ~~~LG~G~fG~Vy~g~~~----g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~----~~~~LV~E~~~ 531 (801)
+.+||+|+||.||+|+.. +..||+|.+..... ...+.+|+.+|.+++||||++++++|. ...++||||+.
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI--SMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE 83 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCC--cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence 357999999999999864 47899999865432 345778999999999999999999873 24679999986
Q ss_pred CCchhhhhhhc------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeee----cCCCCeeeecccce
Q 003703 532 NGSLQDRLFRK------SNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILL----DSELSSKICDFGIC 601 (801)
Q Consensus 532 ~gsL~~~L~~~------~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILL----d~~~~vKL~DFGla 601 (801)
++|.+.+... .....+++..+..|+.||+.||.|||+.+ |+||||||+|||+ +.++.+||+|||++
T Consensus 84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07867 84 -HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred -CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEccCCCCCCcEEEeeccce
Confidence 5777766422 12235889999999999999999999987 9999999999999 56679999999999
Q ss_pred eeccCCCCcCCCccccCCCCCCCCCCCcccccc-CCCCcchhHHhHHHHHHHHHhCCCCCC
Q 003703 602 RLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVG 661 (801)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~-~~~s~ksDVwSlGvvL~ELltG~~Pf~ 661 (801)
+........ ........||+.|+|||++.+ ..++.++|||||||++|||+||++||.
T Consensus 160 ~~~~~~~~~---~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~ 217 (317)
T cd07867 160 RLFNSPLKP---LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 217 (317)
T ss_pred eccCCCccc---ccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcc
Confidence 876543211 112244578999999998876 458999999999999999999999996
No 239
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=5.3e-35 Score=316.34 Aligned_cols=250 Identities=23% Similarity=0.317 Sum_probs=190.9
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEecccc--CCcceeeec
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEY 529 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~-~~~~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~LV~E~ 529 (801)
++|.....||.|+||.||+|... +..||+|.+..... .....+.+|+.++..++||||+++++++. ...++||||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 85 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 85 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence 35778889999999999999875 78999999865433 23345778999999999999999999984 357899999
Q ss_pred CCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCC
Q 003703 530 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTL 609 (801)
Q Consensus 530 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~ 609 (801)
++ ++|.+.+.... ..+++..+..++.||+.||.|||+.+ |+|+||||+|||++.++.+||+|||++........
T Consensus 86 ~~-~~l~~~l~~~~--~~~~~~~~~~~~~qi~~aL~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~ 159 (301)
T cd07873 86 LD-KDLKQYLDDCG--NSINMHNVKLFLFQLLRGLNYCHRRK---VLHRDLKPQNLLINERGELKLADFGLARAKSIPTK 159 (301)
T ss_pred cc-cCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHHHEEECCCCcEEECcCcchhccCCCCC
Confidence 96 68888886543 35788999999999999999999987 99999999999999999999999999876532221
Q ss_pred cCCCccccCCCCCCCCCCCcccccc-CCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHH--hh-------cCcccccc
Q 003703 610 YLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRA--VS-------CGKLSSIL 679 (801)
Q Consensus 610 ~~~~~~~~~~~~Gt~~Y~APE~~~~-~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~--~~-------~g~~~~~~ 679 (801)
......+++.|+|||++.+ ..++.++|||||||++|+|+||++||...+..... +. ...+..++
T Consensus 160 ------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (301)
T cd07873 160 ------TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGIL 233 (301)
T ss_pred ------cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhh
Confidence 1234467899999998765 45789999999999999999999999643321110 00 00000000
Q ss_pred C---------CC-----CCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 680 D---------PL-----AGDWPTFVARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 680 d---------~~-----~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
+ +. ........+..+.+|+.+|++.||.+|||+.+.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil 284 (301)
T cd07873 234 SNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAM 284 (301)
T ss_pred ccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHh
Confidence 0 00 0011122455789999999999999999998544
No 240
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-35 Score=309.46 Aligned_cols=257 Identities=24% Similarity=0.331 Sum_probs=200.8
Q ss_pred HHhcCccccceeeecCceEEEEEEEC--CeEEEEEEec--cCCcccHHHHHHHHHHHhcCCCCceeeEecccc-------
Q 003703 452 TATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLY--SHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP------- 520 (801)
Q Consensus 452 ~at~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~--~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~------- 520 (801)
.....|.....||.|+||.|..+... |..||||++. ....-..+...+|+.+|+.++|+||+.+++.+.
T Consensus 19 ~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f 98 (359)
T KOG0660|consen 19 EIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKF 98 (359)
T ss_pred eccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccccccccc
Confidence 34456666778999999999999875 8999999987 334444566789999999999999999998873
Q ss_pred CCcceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccc
Q 003703 521 EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGI 600 (801)
Q Consensus 521 ~~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGl 600 (801)
.+.|+|+|+| +.+|...+.... .|+......+++|+++||.|+|+.+ |+||||||+|+|++.+..+||+|||+
T Consensus 99 ~DvYiV~elM-etDL~~iik~~~---~L~d~H~q~f~YQiLrgLKyiHSAn---ViHRDLKPsNll~n~~c~lKI~DFGL 171 (359)
T KOG0660|consen 99 NDVYLVFELM-ETDLHQIIKSQQ---DLTDDHAQYFLYQILRGLKYIHSAN---VIHRDLKPSNLLLNADCDLKICDFGL 171 (359)
T ss_pred ceeEEehhHH-hhHHHHHHHcCc---cccHHHHHHHHHHHHHhcchhhccc---ccccccchhheeeccCCCEEeccccc
Confidence 2478999999 778888886543 4788889999999999999999998 99999999999999999999999999
Q ss_pred eeeccCCCCcCCCccccCCCCCCCCCCCcccc-ccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHH----------
Q 003703 601 CRLVTEDTLYLPSFHRSTAPKGSFPYADPEYH-RTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRA---------- 669 (801)
Q Consensus 601 a~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~-~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~---------- 669 (801)
|+..... +.....+..+.|-.|.|||++ ....|+...||||.||||.||++|++-|.+.+.+.+.
T Consensus 172 AR~~~~~----~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP 247 (359)
T KOG0660|consen 172 ARYLDKF----FEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTP 247 (359)
T ss_pred eeecccc----CcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCC
Confidence 9988643 112245777899999999976 4568999999999999999999999998654432221
Q ss_pred -------hhcCccccccC--CCC------CCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHH
Q 003703 670 -------VSCGKLSSILD--PLA------GDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKEL 720 (801)
Q Consensus 670 -------~~~g~~~~~~d--~~~------~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L 720 (801)
+...+....+. |.. .-+| .......+|+.+||..||.+|+|..+.+.+..
T Consensus 248 ~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp-~a~p~AidLlekmL~fdP~kRita~eAL~hPY 312 (359)
T KOG0660|consen 248 SEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFP-NANPLAIDLLEKMLVFDPKKRITAEEALAHPY 312 (359)
T ss_pred CHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcC-CCCHHHHHHHHHHhccCccccCCHHHHhcChh
Confidence 11111111111 000 0112 34567899999999999999999997776654
No 241
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=1.2e-35 Score=325.92 Aligned_cols=238 Identities=25% Similarity=0.339 Sum_probs=185.7
Q ss_pred eeecCceEEEEEEEC--CeEEEEEEeccCCcc---cHHHHHHHHHHHhcC---CCCceeeEecccc--CCcceeeecCCC
Q 003703 463 VGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ---GQLEFQQEVRVLSKL---QHPHLVTLLGACP--EAWSLVYEYLPN 532 (801)
Q Consensus 463 LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~---~~~~f~~E~~il~~l---~HpnIV~l~g~~~--~~~~LV~E~~~~ 532 (801)
||+|+||.||+|+.. |..||||++...... ....+..|..++..+ +||||+++++++. ...++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 799999999999875 889999998653221 223355677777665 6999999999884 357899999999
Q ss_pred CchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCC
Q 003703 533 GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLP 612 (801)
Q Consensus 533 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~ 612 (801)
|+|.+++... ..+++..+..|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 g~L~~~l~~~---~~~~~~~~~~~~~qil~al~~LH~~~---ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~---- 150 (330)
T cd05586 81 GELFWHLQKE---GRFSEDRAKFYIAELVLALEHLHKYD---IVYRDLKPENILLDATGHIALCDFGLSKANLTDN---- 150 (330)
T ss_pred ChHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEecCCcCcCCCCCC----
Confidence 9999888654 35788999999999999999999988 9999999999999999999999999987543222
Q ss_pred CccccCCCCCCCCCCCccccccC-CCCcchhHHhHHHHHHHHHhCCCCCCChhH--HHHHhhcCccccccCCCCCCCC-H
Q 003703 613 SFHRSTAPKGSFPYADPEYHRTG-VLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWP-T 688 (801)
Q Consensus 613 ~~~~~~~~~Gt~~Y~APE~~~~~-~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~--~~~~~~~g~~~~~~d~~~~~~~-~ 688 (801)
.......||+.|+|||++.+. .++.++|||||||++|+|+||+.||..... ....+..+... ++ .
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~---------~~~~ 219 (330)
T cd05586 151 --KTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVR---------FPKN 219 (330)
T ss_pred --CCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCC---------CCCc
Confidence 122355799999999988654 589999999999999999999999964332 22333333221 11 1
Q ss_pred HHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHH
Q 003703 689 FVARRLVDLGLQCCELYGRERPDITPSLVKELE 721 (801)
Q Consensus 689 ~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~ 721 (801)
..+..+.+|+.+||+.||.+||+....+.+.++
T Consensus 220 ~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 220 VLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred cCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 245678899999999999999976544444443
No 242
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=3.3e-35 Score=308.32 Aligned_cols=251 Identities=24% Similarity=0.339 Sum_probs=194.2
Q ss_pred CccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcc--cHHHHHHHHHHHhcCCCCc-eeeEeccccC--------C
Q 003703 456 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ--GQLEFQQEVRVLSKLQHPH-LVTLLGACPE--------A 522 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~--~~~~f~~E~~il~~l~Hpn-IV~l~g~~~~--------~ 522 (801)
.|...++||+|.||+||+|+.. |..||+|++.-.... .-....+|+.+|..++|+| ||.|++++.. .
T Consensus 12 ~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~ 91 (323)
T KOG0594|consen 12 DYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGK 91 (323)
T ss_pred HHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccce
Confidence 4555667999999999999875 899999999765442 2234678999999999999 9999999833 4
Q ss_pred cceeeecCCCCchhhhhhhcCCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccce
Q 003703 523 WSLVYEYLPNGSLQDRLFRKSNV-SPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGIC 601 (801)
Q Consensus 523 ~~LV~E~~~~gsL~~~L~~~~~~-~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla 601 (801)
++|||||+ .-+|..++...... ..++...+..++.||+.||+|||+++ |+||||||.||||+.+|.+||+|||+|
T Consensus 92 l~lvfe~~-d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~---IlHRDLKPQNlLi~~~G~lKlaDFGlA 167 (323)
T KOG0594|consen 92 LYLVFEFL-DRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHG---ILHRDLKPQNLLISSSGVLKLADFGLA 167 (323)
T ss_pred EEEEEEee-cccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCC---eecccCCcceEEECCCCcEeeeccchH
Confidence 67999999 56898888765422 34666889999999999999999998 999999999999999999999999999
Q ss_pred eeccCCCCcCCCccccCCCCCCCCCCCccccccC-CCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhhcCc------
Q 003703 602 RLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTG-VLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGK------ 674 (801)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~-~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~g~------ 674 (801)
+...-... ..+..++|..|.|||++.+. .|++..||||+|||+.||+++++-|....+..+......
T Consensus 168 ra~~ip~~------~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~ 241 (323)
T KOG0594|consen 168 RAFSIPMR------TYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPN 241 (323)
T ss_pred HHhcCCcc------cccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCC
Confidence 97653331 24567899999999998876 799999999999999999999999976555433322111
Q ss_pred ---ccccc---C--CCCCCCC--H----HH---HHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 675 ---LSSIL---D--PLAGDWP--T----FV---ARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 675 ---~~~~~---d--~~~~~~~--~----~~---~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
+..+. + +....|. . .+ .....+++.+|++.+|.+|.+....+
T Consensus 242 e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al 300 (323)
T KOG0594|consen 242 EKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGAL 300 (323)
T ss_pred ccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHh
Confidence 11111 1 0111121 1 11 13789999999999999999988544
No 243
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3e-35 Score=330.87 Aligned_cols=249 Identities=19% Similarity=0.245 Sum_probs=190.5
Q ss_pred hcCccccceeeecCceEEEEEEEC----CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEecccc--CCcceee
Q 003703 454 TCNFSESFKVGQGGFGCVYKGEML----GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVY 527 (801)
Q Consensus 454 t~~f~~~~~LG~G~fG~Vy~g~~~----g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~LV~ 527 (801)
..+|.....||+|+||.||++... +..||+|.+... ..+.+|+.+|.+++|||||++++++. ...++||
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 165 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVM 165 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEe
Confidence 357888999999999999999764 578999987543 23567999999999999999999884 3578999
Q ss_pred ecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCC
Q 003703 528 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 607 (801)
Q Consensus 528 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~ 607 (801)
|++. ++|.+++... ..+++..++.|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 166 e~~~-~~l~~~l~~~---~~l~~~~~~~i~~ql~~aL~~LH~~g---ivHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~ 238 (392)
T PHA03207 166 PKYK-CDLFTYVDRS---GPLPLEQAITIQRRLLEALAYLHGRG---IIHRDVKTENIFLDEPENAVLGDFGAACKLDAH 238 (392)
T ss_pred hhcC-CCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEcCCCCEEEccCccccccCcc
Confidence 9985 6888888432 46899999999999999999999987 999999999999999999999999999866433
Q ss_pred CCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChh------HHHHHhhc---Cccc--
Q 003703 608 TLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAG------EVRRAVSC---GKLS-- 676 (801)
Q Consensus 608 ~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~------~~~~~~~~---g~~~-- 676 (801)
... .......||+.|+|||++.+..++.++|||||||+||||++|+.||.... .+...+.. ....
T Consensus 239 ~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~ 314 (392)
T PHA03207 239 PDT----PQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFP 314 (392)
T ss_pred ccc----ccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccC
Confidence 211 12235679999999999999999999999999999999999999985321 11111100 0000
Q ss_pred ------------cccCCCCCCC--C-----HHHHHHHHHHHHHhhhhCCCCCCCchHHHHH
Q 003703 677 ------------SILDPLAGDW--P-----TFVARRLVDLGLQCCELYGRERPDITPSLVK 718 (801)
Q Consensus 677 ------------~~~d~~~~~~--~-----~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~ 718 (801)
.........+ + ......+.+++.+||..||.+||++.+.+.+
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 315 QNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred CccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0000000000 1 0124568889999999999999999965543
No 244
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=1.2e-34 Score=313.52 Aligned_cols=239 Identities=24% Similarity=0.364 Sum_probs=192.5
Q ss_pred cceeeecCceEEEEEEEC--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEecccc--CCcceeeecCCCCch
Q 003703 460 SFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYLPNGSL 535 (801)
Q Consensus 460 ~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~LV~E~~~~gsL 535 (801)
...||+|+||.||++... +..||||.+..........+.+|+.++..++||||++++++|. +..++||||+++++|
T Consensus 26 ~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L 105 (297)
T cd06659 26 YIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGAL 105 (297)
T ss_pred hhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCH
Confidence 346999999999999874 8899999987655555567889999999999999999999874 457899999999999
Q ss_pred hhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCCCcc
Q 003703 536 QDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFH 615 (801)
Q Consensus 536 ~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~~~~ 615 (801)
..++.. ..+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++........
T Consensus 106 ~~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~------ 172 (297)
T cd06659 106 TDIVSQ----TRLNEEQIATVCESVLQALCYLHSQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP------ 172 (297)
T ss_pred HHHHhh----cCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHeEEccCCcEEEeechhHhhcccccc------
Confidence 987743 35789999999999999999999988 99999999999999999999999999876543221
Q ss_pred ccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHH--hhcCccccccCCCCCCCCHHHHHH
Q 003703 616 RSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRA--VSCGKLSSILDPLAGDWPTFVARR 693 (801)
Q Consensus 616 ~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~--~~~g~~~~~~d~~~~~~~~~~~~~ 693 (801)
......|++.|+|||++.+..++.++|||||||++|||++|+.||......... +..... +.. ..+...+..
T Consensus 173 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~ 246 (297)
T cd06659 173 KRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPP-----PKL-KNAHKISPV 246 (297)
T ss_pred cccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCC-----CCc-cccCCCCHH
Confidence 123456899999999999889999999999999999999999999644332211 111110 000 111123457
Q ss_pred HHHHHHHhhhhCCCCCCCchHHHH
Q 003703 694 LVDLGLQCCELYGRERPDITPSLV 717 (801)
Q Consensus 694 l~~Li~~Cl~~dP~~RPt~~e~l~ 717 (801)
+.+++.+||+.+|.+||++.+.+.
T Consensus 247 l~~~i~~~l~~~P~~Rps~~~ll~ 270 (297)
T cd06659 247 LRDFLERMLTREPQERATAQELLD 270 (297)
T ss_pred HHHHHHHHhcCCcccCcCHHHHhh
Confidence 889999999999999999985444
No 245
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=6.8e-35 Score=320.48 Aligned_cols=247 Identities=25% Similarity=0.289 Sum_probs=189.1
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccceee
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVY 527 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~---~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~ 527 (801)
++|...++||+|+||.||+++.. +..||+|++.+... .....|..|+.++..++|+||+++++++.+ ..++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 36788889999999999999886 67899999864321 223347889999999999999999998843 578999
Q ss_pred ecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCC
Q 003703 528 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 607 (801)
Q Consensus 528 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~ 607 (801)
||+++|+|.+++.... ..+++..+..|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++..+...
T Consensus 81 ey~~~g~L~~~l~~~~--~~l~~~~~~~~~~qi~~al~~lH~~~---iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~ 155 (332)
T cd05623 81 DYYVGGDLLTLLSKFE--DRLPEDMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADFGSCLKLMED 155 (332)
T ss_pred eccCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCCCCEEEeecchheecccC
Confidence 9999999999997643 35888999999999999999999988 999999999999999999999999999765432
Q ss_pred CCcCCCccccCCCCCCCCCCCccccc-----cCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHH--HHhhcCccccccC
Q 003703 608 TLYLPSFHRSTAPKGSFPYADPEYHR-----TGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVR--RAVSCGKLSSILD 680 (801)
Q Consensus 608 ~~~~~~~~~~~~~~Gt~~Y~APE~~~-----~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~--~~~~~g~~~~~~d 680 (801)
.. .......||+.|+|||++. ...++.++|||||||+||||++|+.||....... ..+...... .
T Consensus 156 ~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~-~-- 227 (332)
T cd05623 156 GT-----VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKER-F-- 227 (332)
T ss_pred Cc-----ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCcc-c--
Confidence 21 1223457999999999885 3568999999999999999999999997543221 112111100 0
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhhhCCCC--CCCchHH
Q 003703 681 PLAGDWPTFVARRLVDLGLQCCELYGRE--RPDITPS 715 (801)
Q Consensus 681 ~~~~~~~~~~~~~l~~Li~~Cl~~dP~~--RPt~~e~ 715 (801)
.........+..+.+|+.+|+..++.. ||++.+.
T Consensus 228 -~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~ 263 (332)
T cd05623 228 -QFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDF 263 (332)
T ss_pred -cCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHH
Confidence 001111234567888899988654433 5666643
No 246
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=1.8e-34 Score=316.18 Aligned_cols=253 Identities=18% Similarity=0.212 Sum_probs=188.9
Q ss_pred cceeeec--CceEEEEEEEC--CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEecccc--CCcceeeecCC
Q 003703 460 SFKVGQG--GFGCVYKGEML--GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYLP 531 (801)
Q Consensus 460 ~~~LG~G--~fG~Vy~g~~~--g~~vAiK~l~~~~~--~~~~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~LV~E~~~ 531 (801)
..+||+| +||+||++... |..||+|++..... .....+.+|+.+++.++|||||+++++|. +..++||||++
T Consensus 3 ~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~ 82 (327)
T cd08227 3 LTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMA 82 (327)
T ss_pred hhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccC
Confidence 3579999 78999999875 89999999875432 22345778999999999999999999984 45789999999
Q ss_pred CCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcC
Q 003703 532 NGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYL 611 (801)
Q Consensus 532 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~ 611 (801)
+|+|.+++..... ..+++..++.|+.|++.||.|||+.+ |+||||||+|||++.++.++++|||.+..........
T Consensus 83 ~~~l~~~~~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~---iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~ 158 (327)
T cd08227 83 YGSAKDLICTHFM-DGMSELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRL 158 (327)
T ss_pred CCcHHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCChhhEEEecCCcEEEcccchhhccccccccc
Confidence 9999999865432 35889999999999999999999987 9999999999999999999999998765432211100
Q ss_pred -CCccccCCCCCCCCCCCcccccc--CCCCcchhHHhHHHHHHHHHhCCCCCCChhHH--HHHhhcCccccccCCC----
Q 003703 612 -PSFHRSTAPKGSFPYADPEYHRT--GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEV--RRAVSCGKLSSILDPL---- 682 (801)
Q Consensus 612 -~~~~~~~~~~Gt~~Y~APE~~~~--~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~--~~~~~~g~~~~~~d~~---- 682 (801)
..........++..|+|||++.+ ..++.++|||||||++|||++|+.||...... ......+.+...++..
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (327)
T cd08227 159 RVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPA 238 (327)
T ss_pred cccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhh
Confidence 00011123457888999999876 46899999999999999999999999643221 1111112221111100
Q ss_pred ---------------------------------CCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 683 ---------------------------------AGDWPTFVARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 683 ---------------------------------~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
...+....+..+.+|+.+||+.||.+|||+.+.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell 305 (327)
T cd08227 239 EELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLL 305 (327)
T ss_pred hhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHh
Confidence 0011223456899999999999999999998544
No 247
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=2.4e-34 Score=301.91 Aligned_cols=242 Identities=29% Similarity=0.470 Sum_probs=193.6
Q ss_pred eeeecCceEEEEEEEC-CeEEEEEEeccCCcc-cHHHHHHHHHHHhcCCCCceeeEeccccC--CcceeeecCCCCchhh
Q 003703 462 KVGQGGFGCVYKGEML-GRTVAIKMLYSHNMQ-GQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYLPNGSLQD 537 (801)
Q Consensus 462 ~LG~G~fG~Vy~g~~~-g~~vAiK~l~~~~~~-~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E~~~~gsL~~ 537 (801)
+||.|+||.||++.+. ++.||+|.+...... ....|.+|+.++.+++||||+++++++.+ ..++||||+++++|.+
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~ 81 (251)
T cd05041 2 KIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLLT 81 (251)
T ss_pred ccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHHH
Confidence 6999999999999876 899999998765443 44578999999999999999999998854 4789999999999999
Q ss_pred hhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCCCcccc
Q 003703 538 RLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRS 617 (801)
Q Consensus 538 ~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~~~~~~ 617 (801)
++.... ..+++..++.++.+++.||.|||+++ ++||||||+|||++.++.+||+|||++.......... ..
T Consensus 82 ~l~~~~--~~~~~~~~~~~~~~~~~~l~~lH~~~---i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~----~~ 152 (251)
T cd05041 82 FLRKKK--NRLTVKKLLQMSLDAAAGMEYLESKN---CIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTV----SD 152 (251)
T ss_pred HHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCC---EehhhcCcceEEEcCCCcEEEeeccccccccCCccee----cc
Confidence 986543 35788999999999999999999988 9999999999999999999999999998654322110 11
Q ss_pred CCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChhH--HHHHhhcCccccccCCCCCCCCHHHHHHH
Q 003703 618 TAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWPTFVARRL 694 (801)
Q Consensus 618 ~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~~--~~~~~~~g~~~~~~d~~~~~~~~~~~~~l 694 (801)
....++..|+|||++.++.++.++|||||||++|||+| |..||..... ....+..+. . ...+...+..+
T Consensus 153 ~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~--~------~~~~~~~~~~~ 224 (251)
T cd05041 153 GLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGY--R------MPAPQLCPEEI 224 (251)
T ss_pred ccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCC--C------CCCCccCCHHH
Confidence 22334677999999988899999999999999999999 8889864332 222222211 0 11233345689
Q ss_pred HHHHHHhhhhCCCCCCCchHHHHHHHH
Q 003703 695 VDLGLQCCELYGRERPDITPSLVKELE 721 (801)
Q Consensus 695 ~~Li~~Cl~~dP~~RPt~~e~l~~~L~ 721 (801)
.+++.+||..+|.+||++. ++...|+
T Consensus 225 ~~li~~~l~~~p~~Rp~~~-ell~~l~ 250 (251)
T cd05041 225 YRLMLQCWAYDPENRPSFS-EIYNELQ 250 (251)
T ss_pred HHHHHHHhccChhhCcCHH-HHHHHhh
Confidence 9999999999999999998 5655553
No 248
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=2.4e-34 Score=304.80 Aligned_cols=247 Identities=26% Similarity=0.329 Sum_probs=195.4
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc-----ccHHHHHHHHHHHhcCCCCceeeEeccccC----Cc
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM-----QGQLEFQQEVRVLSKLQHPHLVTLLGACPE----AW 523 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~-----~~~~~f~~E~~il~~l~HpnIV~l~g~~~~----~~ 523 (801)
.+|...+.||+|+||.||+|... |..||||.+..... .....+.+|+.++.+++||||+++++++.+ ..
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 46888899999999999999874 78999998854321 123467889999999999999999998753 25
Q ss_pred ceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceee
Q 003703 524 SLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRL 603 (801)
Q Consensus 524 ~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~ 603 (801)
++||||+++++|.+++.... .+++...+.++.+++.||.|||+.+ |+|+||||+||+++.++.++|+|||++..
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~l~Dfg~~~~ 155 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYG---ALTENVTRKYTRQILEGVSYLHSNM---IVHRDIKGANILRDSVGNVKLGDFGASKR 155 (265)
T ss_pred EEEEEecCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEecCCCCEEECcCccccc
Confidence 68999999999999886543 4778889999999999999999987 99999999999999999999999999886
Q ss_pred ccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhhcCccccccCCCC
Q 003703 604 VTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLA 683 (801)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~g~~~~~~d~~~ 683 (801)
....... ........||..|+|||++.+..++.++|||||||++|+|++|+.||............. ..+..
T Consensus 156 ~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~-----~~~~~ 227 (265)
T cd06652 156 LQTICLS---GTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIA-----TQPTN 227 (265)
T ss_pred ccccccc---ccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHh-----cCCCC
Confidence 5432111 011234568999999999988889999999999999999999999997543322211110 11122
Q ss_pred CCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 684 GDWPTFVARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 684 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
...|......+.+++.+|+. +|..||++.+.+
T Consensus 228 ~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il 259 (265)
T cd06652 228 PVLPPHVSDHCRDFLKRIFV-EAKLRPSADELL 259 (265)
T ss_pred CCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHh
Confidence 33455667788899999994 999999988433
No 249
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=6.1e-35 Score=320.74 Aligned_cols=240 Identities=26% Similarity=0.301 Sum_probs=186.2
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccceee
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVY 527 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~---~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~ 527 (801)
++|...+.||+|+||.||+++.. +..||+|++..... .....+.+|+.++..++|+||+++++++.+ ..++||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46888899999999999999885 78899999865322 223347889999999999999999998853 478999
Q ss_pred ecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCC
Q 003703 528 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 607 (801)
Q Consensus 528 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~ 607 (801)
||++||+|.+++.... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 81 Ey~~gg~L~~~l~~~~--~~l~~~~~~~~~~qi~~~L~~lH~~~---iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 155 (331)
T cd05624 81 DYYVGGDLLTLLSKFE--DRLPEDMARFYIAEMVLAIHSIHQLH---YVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQD 155 (331)
T ss_pred eCCCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCchHHEEEcCCCCEEEEeccceeeccCC
Confidence 9999999999997643 35788999999999999999999987 999999999999999999999999999876543
Q ss_pred CCcCCCccccCCCCCCCCCCCcccccc-----CCCCcchhHHhHHHHHHHHHhCCCCCCChhHH--HHHhhcCccccccC
Q 003703 608 TLYLPSFHRSTAPKGSFPYADPEYHRT-----GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEV--RRAVSCGKLSSILD 680 (801)
Q Consensus 608 ~~~~~~~~~~~~~~Gt~~Y~APE~~~~-----~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~--~~~~~~g~~~~~~d 680 (801)
... ......||+.|+|||++.+ +.++.++|||||||+||+|++|+.||...... ...+...... +
T Consensus 156 ~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~-~-- 227 (331)
T cd05624 156 GTV-----QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEER-F-- 227 (331)
T ss_pred Cce-----eeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCc-c--
Confidence 211 1234569999999998865 56889999999999999999999999643322 1111111100 0
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhhhCCCC
Q 003703 681 PLAGDWPTFVARRLVDLGLQCCELYGRE 708 (801)
Q Consensus 681 ~~~~~~~~~~~~~l~~Li~~Cl~~dP~~ 708 (801)
.........+..+.+|+.+|+..++.+
T Consensus 228 -~~p~~~~~~~~~~~~li~~ll~~~~~~ 254 (331)
T cd05624 228 -QFPSHITDVSEEAKDLIQRLICSRERR 254 (331)
T ss_pred -cCCCccccCCHHHHHHHHHHccCchhh
Confidence 001111124567888999998865543
No 250
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=8.5e-35 Score=311.86 Aligned_cols=242 Identities=25% Similarity=0.405 Sum_probs=193.4
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCC-cccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccceeeec
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHN-MQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEY 529 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~-~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E~ 529 (801)
++|...+.||+|+||.||++... |..||+|++.... ......|.+|+.++..++||||+++++++.. ..++||||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF 84 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence 35666778999999999999886 8899999886543 2345678999999999999999999999843 57899999
Q ss_pred CCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCC
Q 003703 530 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTL 609 (801)
Q Consensus 530 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~ 609 (801)
+++|+|.+++... .++++.....++.+++.||.|||+.. +++||||||+||+++.++.++|+|||++.......
T Consensus 85 ~~~~~L~~~~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~- 158 (284)
T cd06620 85 MDCGSLDRIYKKG---GPIPVEILGKIAVAVVEGLTYLYNVH--RIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSI- 158 (284)
T ss_pred CCCCCHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHHhc--CeeccCCCHHHEEECCCCcEEEccCCcccchhhhc-
Confidence 9999999988653 35899999999999999999999742 39999999999999999999999999987553221
Q ss_pred cCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhH----------HHHHhhcCcccccc
Q 003703 610 YLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE----------VRRAVSCGKLSSIL 679 (801)
Q Consensus 610 ~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~----------~~~~~~~g~~~~~~ 679 (801)
.....||..|+|||++.+..++.++|||||||++|+|+||+.||..... +...+ ..+.
T Consensus 159 -------~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~-----~~~~ 226 (284)
T cd06620 159 -------ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLL-----QQIV 226 (284)
T ss_pred -------cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHH-----HHHh
Confidence 2245789999999999888999999999999999999999999974321 01111 1111
Q ss_pred CCCCCCCCH-HHHHHHHHHHHHhhhhCCCCCCCchH
Q 003703 680 DPLAGDWPT-FVARRLVDLGLQCCELYGRERPDITP 714 (801)
Q Consensus 680 d~~~~~~~~-~~~~~l~~Li~~Cl~~dP~~RPt~~e 714 (801)
.......+. ..+..+.+|+.+||+.||.+||++.+
T Consensus 227 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e 262 (284)
T cd06620 227 QEPPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQ 262 (284)
T ss_pred hccCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHH
Confidence 111111121 25567899999999999999999984
No 251
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=2.5e-34 Score=307.11 Aligned_cols=246 Identities=26% Similarity=0.365 Sum_probs=198.3
Q ss_pred CccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEeccccC--CcceeeecC
Q 003703 456 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYL 530 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~-~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E~~ 530 (801)
.|.....||.|+||.||+|.+. +..||||++..... .....+.+|+.+++.++||||++++++|.+ ..++||||+
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence 4566678999999999999874 78999999875432 334568899999999999999999999853 578999999
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCc
Q 003703 531 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLY 610 (801)
Q Consensus 531 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~ 610 (801)
++|+|.+++.. .++++.....++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++........
T Consensus 85 ~~~~L~~~i~~----~~l~~~~~~~~~~~l~~~l~~lh~~~---ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~- 156 (277)
T cd06640 85 GGGSALDLLRA----GPFDEFQIATMLKEILKGLDYLHSEK---KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI- 156 (277)
T ss_pred CCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCC---ccCcCCChhhEEEcCCCCEEEcccccceeccCCcc-
Confidence 99999998853 35788999999999999999999987 99999999999999999999999999987643221
Q ss_pred CCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhhcCccccccCCCCCCCCHHH
Q 003703 611 LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFV 690 (801)
Q Consensus 611 ~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~g~~~~~~d~~~~~~~~~~ 690 (801)
......|+..|+|||++.+..++.++|||||||++|||+||.+||........... +........+...
T Consensus 157 -----~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~------~~~~~~~~~~~~~ 225 (277)
T cd06640 157 -----KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFL------IPKNNPPTLTGEF 225 (277)
T ss_pred -----ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhh------hhcCCCCCCchhh
Confidence 12345688999999999888899999999999999999999999964332211110 0000112334456
Q ss_pred HHHHHHHHHHhhhhCCCCCCCchHHHHHHH
Q 003703 691 ARRLVDLGLQCCELYGRERPDITPSLVKEL 720 (801)
Q Consensus 691 ~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L 720 (801)
+..+.+++.+||+.+|.+||++.+.+.+.+
T Consensus 226 ~~~~~~li~~~l~~~p~~Rp~~~~il~~~~ 255 (277)
T cd06640 226 SKPFKEFIDACLNKDPSFRPTAKELLKHKF 255 (277)
T ss_pred hHHHHHHHHHHcccCcccCcCHHHHHhChH
Confidence 778999999999999999999986554433
No 252
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=1.8e-34 Score=303.40 Aligned_cols=243 Identities=29% Similarity=0.404 Sum_probs=196.3
Q ss_pred CccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc-----ccHHHHHHHHHHHhcCCCCceeeEeccccC--Cccee
Q 003703 456 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM-----QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLV 526 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~-----~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV 526 (801)
+|.....||+|+||.||+|... +..|++|.+..... .....+.+|+.++..++||||+++++++.+ ..++|
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 3566778999999999999884 88999999865432 233568899999999999999999999854 57899
Q ss_pred eecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccC
Q 003703 527 YEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTE 606 (801)
Q Consensus 527 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~ 606 (801)
|||+++++|.+++... ..+++..+..++.+++.||.|||+.+ |+|+||+|+||+++.++.+||+|||++.....
T Consensus 81 ~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~ 154 (258)
T cd06632 81 LELVPGGSLAKLLKKY---GSFPEPVIRLYTRQILLGLEYLHDRN---TVHRDIKGANILVDTNGVVKLADFGMAKQVVE 154 (258)
T ss_pred EEecCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccCccceeccc
Confidence 9999999999998654 35889999999999999999999987 99999999999999999999999999887643
Q ss_pred CCCcCCCccccCCCCCCCCCCCccccccCC-CCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhhcCccccccCCCCCC
Q 003703 607 DTLYLPSFHRSTAPKGSFPYADPEYHRTGV-LTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGD 685 (801)
Q Consensus 607 ~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~-~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~g~~~~~~d~~~~~ 685 (801)
.. ......|++.|++||.+.... ++.++|+|||||++|+|++|+.||............+.... ...
T Consensus 155 ~~-------~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~-----~~~ 222 (258)
T cd06632 155 FS-------FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKE-----LPP 222 (258)
T ss_pred cc-------cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhccc-----CCC
Confidence 32 123456899999999887766 89999999999999999999999975443322222221111 112
Q ss_pred CCHHHHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 686 WPTFVARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 686 ~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
.+......+.+++.+||+.+|.+||++.+.+
T Consensus 223 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l 253 (258)
T cd06632 223 IPDHLSDEAKDFILKCLQRDPSLRPTAAELL 253 (258)
T ss_pred cCCCcCHHHHHHHHHHhhcCcccCcCHHHHh
Confidence 2334567889999999999999999998543
No 253
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.3e-34 Score=316.48 Aligned_cols=201 Identities=24% Similarity=0.361 Sum_probs=167.9
Q ss_pred CccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccceeee
Q 003703 456 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYE 528 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~---~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E 528 (801)
-|...+.||-|+||.|.+++-. ...||+|.|.+.+. .....++.|.+||.....++||+||..|.+ .+|+||+
T Consensus 630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMd 709 (1034)
T KOG0608|consen 630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 709 (1034)
T ss_pred ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEe
Confidence 4667778999999999998653 67799999976543 223457899999999999999999999954 6899999
Q ss_pred cCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeecc--C
Q 003703 529 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVT--E 606 (801)
Q Consensus 529 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~--~ 606 (801)
|++||++..+|.+.+ .|....+..++.++.+|+++.|..| +|||||||+|||||.+|++||.|||||.-+. .
T Consensus 710 YIPGGDmMSLLIrmg---IFeE~LARFYIAEltcAiesVHkmG---FIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTH 783 (1034)
T KOG0608|consen 710 YIPGGDMMSLLIRMG---IFEEDLARFYIAELTCAIESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 783 (1034)
T ss_pred ccCCccHHHHHHHhc---cCHHHHHHHHHHHHHHHHHHHHhcc---ceecccCccceEEccCCceeeeeccccccceecc
Confidence 999999999998775 5677888888999999999999999 9999999999999999999999999996542 1
Q ss_pred CCCcCCC----------------------------------ccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHH
Q 003703 607 DTLYLPS----------------------------------FHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQ 652 (801)
Q Consensus 607 ~~~~~~~----------------------------------~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~E 652 (801)
+..+... .......+||+.|+|||++...+|+..||+||.||||||
T Consensus 784 dskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~e 863 (1034)
T KOG0608|consen 784 DSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYE 863 (1034)
T ss_pred ccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHH
Confidence 1100000 000124589999999999999999999999999999999
Q ss_pred HHhCCCCCCC
Q 003703 653 LLTGRLPVGL 662 (801)
Q Consensus 653 LltG~~Pf~~ 662 (801)
|+.|++||-.
T Consensus 864 m~~g~~pf~~ 873 (1034)
T KOG0608|consen 864 MLVGQPPFLA 873 (1034)
T ss_pred HhhCCCCccC
Confidence 9999999953
No 254
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=4e-34 Score=307.29 Aligned_cols=250 Identities=26% Similarity=0.348 Sum_probs=196.6
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEeccccC----Ccceee
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACPE----AWSLVY 527 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~-~~~~~f~~E~~il~~l~HpnIV~l~g~~~~----~~~LV~ 527 (801)
++|...+.||.|+||.||++.+. +..||+|.+..... .....+.+|++++++++||||++++++|.+ ..++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 36778889999999999999984 78999999875433 344568999999999999999999998842 368999
Q ss_pred ecCCCCchhhhhhhc-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccC
Q 003703 528 EYLPNGSLQDRLFRK-SNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTE 606 (801)
Q Consensus 528 E~~~~gsL~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~ 606 (801)
||+++++|.+++... .....+++.....|+.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.....
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 157 (287)
T cd06621 81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRK---IIHRDIKPSNILLTRKGQVKLCDFGVSGELVN 157 (287)
T ss_pred EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEecCCeEEEeeccccccccc
Confidence 999999999887542 22356888999999999999999999987 99999999999999999999999999876543
Q ss_pred CCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChh-------HHHHHhhcCcccccc
Q 003703 607 DTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAG-------EVRRAVSCGKLSSIL 679 (801)
Q Consensus 607 ~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~-------~~~~~~~~g~~~~~~ 679 (801)
.. .....++..|+|||.+.+..++.++|||||||++|+|++|+.||.... .....+.......+.
T Consensus 158 ~~--------~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (287)
T cd06621 158 SL--------AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELK 229 (287)
T ss_pred cc--------cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhc
Confidence 21 123457889999999999999999999999999999999999997441 111111111111111
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHH
Q 003703 680 DPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLV 717 (801)
Q Consensus 680 d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~ 717 (801)
+.... ....+..+.+++.+||..+|.+|||+.+.+.
T Consensus 230 ~~~~~--~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 230 DEPGN--GIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred cCCCC--CCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 11110 0124567899999999999999999985443
No 255
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=4e-35 Score=320.26 Aligned_cols=256 Identities=26% Similarity=0.432 Sum_probs=210.1
Q ss_pred HHHHHhcCccccceeeecCceEEEEEEEC----C--eEEEEEEeccCC-cccHHHHHHHHHHHhcCCCCceeeEeccccC
Q 003703 449 DLQTATCNFSESFKVGQGGFGCVYKGEML----G--RTVAIKMLYSHN-MQGQLEFQQEVRVLSKLQHPHLVTLLGACPE 521 (801)
Q Consensus 449 el~~at~~f~~~~~LG~G~fG~Vy~g~~~----g--~~vAiK~l~~~~-~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~ 521 (801)
+++.........++||.|-||.||+|.+. | -.||||..+.+. ....+.|..|..+|+.++|||||+|+|.|.+
T Consensus 383 nyel~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e 462 (974)
T KOG4257|consen 383 NYELRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE 462 (974)
T ss_pred cceeehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec
Confidence 44444455566778999999999999875 3 359999998754 4556679999999999999999999999976
Q ss_pred C-cceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccc
Q 003703 522 A-WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGI 600 (801)
Q Consensus 522 ~-~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGl 600 (801)
. ..+|||.++-|.|..+|..+. ..|+......+++||+.||.|||+.. +|||||...|||+...-.|||+|||+
T Consensus 463 ~P~WivmEL~~~GELr~yLq~nk--~sL~l~tL~ly~~Qi~talaYLeSkr---fVHRDIAaRNiLVsSp~CVKLaDFGL 537 (974)
T KOG4257|consen 463 QPMWIVMELAPLGELREYLQQNK--DSLPLRTLTLYCYQICTALAYLESKR---FVHRDIAARNILVSSPQCVKLADFGL 537 (974)
T ss_pred cceeEEEecccchhHHHHHHhcc--ccchHHHHHHHHHHHHHHHHHHHhhc---hhhhhhhhhheeecCcceeeecccch
Confidence 5 679999999999999998765 46777888999999999999999987 99999999999999999999999999
Q ss_pred eeeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChhHH--HHHhhcCcccc
Q 003703 601 CRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGEV--RRAVSCGKLSS 677 (801)
Q Consensus 601 a~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~--~~~~~~g~~~~ 677 (801)
++.+.++..+ ..+...-..-|||||-+....++.++|||-|||++||++. |..||....+. ...+..|
T Consensus 538 SR~~ed~~yY-----kaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnG---- 608 (974)
T KOG4257|consen 538 SRYLEDDAYY-----KASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENG---- 608 (974)
T ss_pred hhhccccchh-----hccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCC----
Confidence 9999876543 3334444567999999999999999999999999999888 99999765431 1112222
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHHh
Q 003703 678 ILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 723 (801)
Q Consensus 678 ~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~l 723 (801)
.....|+.++..|..|+.+||..+|.+||.+. ++...|..+
T Consensus 609 ----eRlP~P~nCPp~LYslmskcWayeP~kRPrft-ei~~~lsdv 649 (974)
T KOG4257|consen 609 ----ERLPCPPNCPPALYSLMSKCWAYEPSKRPRFT-EIKAILSDV 649 (974)
T ss_pred ----CCCCCCCCCChHHHHHHHHHhccCcccCCcHH-HHHHHHHHH
Confidence 22345667778999999999999999999998 566666554
No 256
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=1.1e-34 Score=305.67 Aligned_cols=247 Identities=24% Similarity=0.340 Sum_probs=198.5
Q ss_pred CccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEeccccC----Ccceee
Q 003703 456 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACPE----AWSLVY 527 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~--~~~~~f~~E~~il~~l~HpnIV~l~g~~~~----~~~LV~ 527 (801)
+|...+.||.|+||.||++... |..||+|++..... .....+..|+.+++.++||||+++++++.. ..+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 4667788999999999999874 78999999875433 234468899999999999999999987632 357999
Q ss_pred ecCCCCchhhhhhhc-CCCCCCCHHHHHHHHHHHHHHHHHHHhcC--CCceeeCCCCCCCeeecCCCCeeeecccceeec
Q 003703 528 EYLPNGSLQDRLFRK-SNVSPLLWKDRARIAAEIASGLCFLHSSK--PEKIVHGDLKPQNILLDSELSSKICDFGICRLV 604 (801)
Q Consensus 528 E~~~~gsL~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~yLH~~~--~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~ 604 (801)
||+++++|.+++... ....++++..++.++.+++.||.|||..+ ..+|+|+||+|+||+++.++.+||+|||++...
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~ 160 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL 160 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence 999999999998654 22357899999999999999999999332 234999999999999999999999999999877
Q ss_pred cCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhH--HHHHhhcCccccccCCC
Q 003703 605 TEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILDPL 682 (801)
Q Consensus 605 ~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~--~~~~~~~g~~~~~~d~~ 682 (801)
..... ......|++.|+|||++.+..++.++||||||+++|+|++|+.||..... ....+..+..
T Consensus 161 ~~~~~------~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~------- 227 (265)
T cd08217 161 GHDSS------FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGKF------- 227 (265)
T ss_pred cCCcc------cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcCCC-------
Confidence 54331 12345689999999999988899999999999999999999999975432 2222222221
Q ss_pred CCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 683 AGDWPTFVARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 683 ~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
...+...+..+.+++.+|++.+|.+||++.+.+
T Consensus 228 -~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il 260 (265)
T cd08217 228 -RRIPYRYSSELNEVIKSMLNVDPDKRPSTEELL 260 (265)
T ss_pred -CCCccccCHHHHHHHHHHccCCcccCCCHHHHh
Confidence 233445667899999999999999999998544
No 257
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=3.5e-34 Score=301.59 Aligned_cols=243 Identities=21% Similarity=0.285 Sum_probs=197.8
Q ss_pred CccccceeeecCceEEEEEEEC--CeEEEEEEeccCC--cccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccceeeec
Q 003703 456 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHN--MQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEY 529 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~--~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E~ 529 (801)
+|+..+.||.|+||.||.++.. +..|++|.+.... ......+.+|+.++++++|+||+++++++.+ ..+++|||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 4777889999999999888764 8899999986543 2334568899999999999999999999854 46789999
Q ss_pred CCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCC
Q 003703 530 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTL 609 (801)
Q Consensus 530 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~ 609 (801)
+++|+|.+++.... ...+++..+..++.+++.||.|||+.+ ++|+||+|+||+++.++.+||+|||++........
T Consensus 81 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~ 156 (256)
T cd08221 81 ANGGTLYDKIVRQK-GQLFEEEMVLWYLFQIVSAVSYIHKAG---ILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS 156 (256)
T ss_pred cCCCcHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChHhEEEeCCCCEEECcCcceEEcccccc
Confidence 99999999987653 246889999999999999999999987 99999999999999999999999999987654331
Q ss_pred cCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhH--HHHHhhcCccccccCCCCCCCC
Q 003703 610 YLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWP 687 (801)
Q Consensus 610 ~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~--~~~~~~~g~~~~~~d~~~~~~~ 687 (801)
......|++.|+|||++.+..++.++||||||+++|+|++|..||..... ....+..+.+.. .+
T Consensus 157 ------~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~--------~~ 222 (256)
T cd08221 157 ------MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTP--------VV 222 (256)
T ss_pred ------cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCC--------Cc
Confidence 12345689999999999888899999999999999999999999974332 112222332221 12
Q ss_pred HHHHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 688 TFVARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 688 ~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
...+..+.+++.+||..+|.+||++.+.+
T Consensus 223 ~~~~~~~~~~i~~~l~~~p~~R~s~~~ll 251 (256)
T cd08221 223 SVYSSELISLVHSLLQQDPEKRPTADEVL 251 (256)
T ss_pred cccCHHHHHHHHHHcccCcccCCCHHHHh
Confidence 33456789999999999999999998433
No 258
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=3.1e-34 Score=303.18 Aligned_cols=254 Identities=24% Similarity=0.274 Sum_probs=200.1
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEecccc--CCcceeeec
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEY 529 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~-~~~~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~LV~E~ 529 (801)
++|...+.||.|+||+||+|... +..+|+|++..... .....+.+|+.+++.++|+||+++++.+. +..++||||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 46888899999999999999874 78999999875443 34457899999999999999999999874 457899999
Q ss_pred CCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCC
Q 003703 530 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTL 609 (801)
Q Consensus 530 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~ 609 (801)
+++++|.+++........+++.....++.|++.||.|||+.+ |+|+||+|+||+++.++.++|+|||++..+.....
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~---i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~ 157 (267)
T cd06610 81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNG---QIHRDIKAGNILLGEDGSVKIADFGVSASLADGGD 157 (267)
T ss_pred cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc
Confidence 999999999976543356899999999999999999999987 99999999999999999999999999987654332
Q ss_pred cCCCccccCCCCCCCCCCCccccccC-CCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhhcCccccccCCCCCC--C
Q 003703 610 YLPSFHRSTAPKGSFPYADPEYHRTG-VLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGD--W 686 (801)
Q Consensus 610 ~~~~~~~~~~~~Gt~~Y~APE~~~~~-~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~g~~~~~~d~~~~~--~ 686 (801)
.. ........|++.|+|||++... .++.++|||||||++|+|++|+.||.............. . ..+.... .
T Consensus 158 ~~--~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~--~-~~~~~~~~~~ 232 (267)
T cd06610 158 RT--RKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQ--N-DPPSLETGAD 232 (267)
T ss_pred cc--ccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhc--C-CCCCcCCccc
Confidence 11 0122345689999999998777 789999999999999999999999975433221111000 0 0011111 1
Q ss_pred CHHHHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 687 PTFVARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 687 ~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
....+..+.+++.+||..||.+||++.+.+
T Consensus 233 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll 262 (267)
T cd06610 233 YKKYSKSFRKMISLCLQKDPSKRPTAEELL 262 (267)
T ss_pred cccccHHHHHHHHHHcCCChhhCcCHHHHh
Confidence 124567889999999999999999988544
No 259
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=3.8e-34 Score=311.63 Aligned_cols=254 Identities=25% Similarity=0.282 Sum_probs=198.8
Q ss_pred CccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcc---cHHHHHHHHHHHhcCCCCceeeEeccccC--Ccceeee
Q 003703 456 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ---GQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYE 528 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~---~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E 528 (801)
+|...+.||+|+||.||++... +..||||.+...... ....+..|+.++..++||||+++++.+.+ ..++|||
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 81 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMD 81 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEE
Confidence 6778889999999999999885 789999999765433 33468899999999999999999998854 4789999
Q ss_pred cCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCC
Q 003703 529 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDT 608 (801)
Q Consensus 529 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~ 608 (801)
|+.+++|.+++.... ...+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 82 ~~~~~~L~~~~~~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~ 157 (316)
T cd05574 82 YCPGGELFRLLQRQP-GKCLSEEVARFYAAEVLLALEYLHLLG---IVYRDLKPENILLHESGHIMLSDFDLSKQSDVEP 157 (316)
T ss_pred ecCCCCHHHHHHhCC-CCccCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChHHeEEcCCCCEEEeecchhhcccccc
Confidence 999999999886432 346899999999999999999999987 9999999999999999999999999987654321
Q ss_pred CcC-----------------------CCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhH
Q 003703 609 LYL-----------------------PSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE 665 (801)
Q Consensus 609 ~~~-----------------------~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~ 665 (801)
... ..........||..|+|||++.+..++.++|||||||++|+|++|+.||...+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~ 237 (316)
T cd05574 158 PPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNR 237 (316)
T ss_pred cccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCch
Confidence 110 000112234789999999999988999999999999999999999999975443
Q ss_pred HHHHhhcCccccccCCCCCCCCH--HHHHHHHHHHHHhhhhCCCCCCCchHHHHHHH
Q 003703 666 VRRAVSCGKLSSILDPLAGDWPT--FVARRLVDLGLQCCELYGRERPDITPSLVKEL 720 (801)
Q Consensus 666 ~~~~~~~g~~~~~~d~~~~~~~~--~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L 720 (801)
...... +.+.. ..++. ..+..+.+++.+||..+|.+||+....+.+.|
T Consensus 238 ~~~~~~------~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll 287 (316)
T cd05574 238 DETFSN------ILKKE-VTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIK 287 (316)
T ss_pred HHHHHH------HhcCC-ccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHH
Confidence 222111 11100 01111 15678999999999999999999654433333
No 260
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.5e-34 Score=329.57 Aligned_cols=247 Identities=21% Similarity=0.287 Sum_probs=190.0
Q ss_pred hcCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEecccc--CCcceeeec
Q 003703 454 TCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEY 529 (801)
Q Consensus 454 t~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~LV~E~ 529 (801)
..+|.....||+|+||.||++.+. +..||||.... ..+.+|+.+|++++|||||++++++. ...+|||++
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~ 241 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPK 241 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 457888899999999999999986 78899996432 23568999999999999999999874 457899999
Q ss_pred CCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCC
Q 003703 530 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTL 609 (801)
Q Consensus 530 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~ 609 (801)
+ .++|.+++.... ..++|..++.|+.||+.||.|||+.+ |+||||||+||||+.++.+||+|||+++.+.....
T Consensus 242 ~-~~~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~ 315 (461)
T PHA03211 242 Y-RSDLYTYLGARL--RPLGLAQVTAVARQLLSAIDYIHGEG---IIHRDIKTENVLVNGPEDICLGDFGAACFARGSWS 315 (461)
T ss_pred c-CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCC---EEECcCCHHHEEECCCCCEEEcccCCceecccccc
Confidence 9 578888876543 36899999999999999999999988 99999999999999999999999999987643221
Q ss_pred cCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCC----------hhHHHHHhhcCccc--c
Q 003703 610 YLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGL----------AGEVRRAVSCGKLS--S 677 (801)
Q Consensus 610 ~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~----------~~~~~~~~~~g~~~--~ 677 (801)
. .......||+.|+|||++.+..++.++|||||||+||||++|..|+.. ...+...+....+. .
T Consensus 316 ~----~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~ 391 (461)
T PHA03211 316 T----PFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDE 391 (461)
T ss_pred c----ccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhcccccc
Confidence 1 112345799999999999999999999999999999999998865421 11222222222111 0
Q ss_pred cc-------------------CC--CCCCCCH--HHHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 678 IL-------------------DP--LAGDWPT--FVARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 678 ~~-------------------d~--~~~~~~~--~~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
.. .+ ....|.. .....+.+|+.+||+.||.+|||+.+.+
T Consensus 392 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL 453 (461)
T PHA03211 392 FPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELL 453 (461)
T ss_pred CCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHh
Confidence 00 00 0011211 2334788999999999999999998544
No 261
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=3.1e-34 Score=304.92 Aligned_cols=251 Identities=24% Similarity=0.411 Sum_probs=196.1
Q ss_pred ccccceeeecCceEEEEEEEC-----CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEeccccC--------
Q 003703 457 FSESFKVGQGGFGCVYKGEML-----GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACPE-------- 521 (801)
Q Consensus 457 f~~~~~LG~G~fG~Vy~g~~~-----g~~vAiK~l~~~~~--~~~~~f~~E~~il~~l~HpnIV~l~g~~~~-------- 521 (801)
|...+.||+|+||.||+|.+. +..||||++..... .....+.+|+.+++.++||||+++++++..
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 455678999999999999763 57899999875432 334568899999999999999999998732
Q ss_pred CcceeeecCCCCchhhhhhhcC---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecc
Q 003703 522 AWSLVYEYLPNGSLQDRLFRKS---NVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDF 598 (801)
Q Consensus 522 ~~~LV~E~~~~gsL~~~L~~~~---~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DF 598 (801)
..+++++|+++|+|.+++.... ....+++...+.++.|++.||.|||+.+ |+||||||+||+++.++.+||+||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKN---FIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccchhhEEEcCCCCEEECcc
Confidence 1367899999999998875321 2235788999999999999999999987 999999999999999999999999
Q ss_pred cceeeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChhH--HHHHhhcCcc
Q 003703 599 GICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKL 675 (801)
Q Consensus 599 Gla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~~--~~~~~~~g~~ 675 (801)
|+++........ .......+++.|++||.+....++.++|||||||++|+|++ |++||..... ....+..+..
T Consensus 158 g~~~~~~~~~~~----~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~ 233 (273)
T cd05074 158 GLSKKIYSGDYY----RQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGNR 233 (273)
T ss_pred cccccccCCcce----ecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcCCc
Confidence 999876433211 11233446678999999998899999999999999999999 8899864432 2222322221
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHHh
Q 003703 676 SSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 723 (801)
Q Consensus 676 ~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~l 723 (801)
. ..+...+..+.+++.+||+.+|.+||++. ++...|+.+
T Consensus 234 ~--------~~~~~~~~~~~~l~~~~l~~~p~~Rps~~-~~~~~l~~~ 272 (273)
T cd05074 234 L--------KQPPDCLEDVYELMCQCWSPEPKCRPSFQ-HLRDQLELI 272 (273)
T ss_pred C--------CCCCCCCHHHHHHHHHHcCCChhhCcCHH-HHHHHHHhh
Confidence 1 11223456899999999999999999998 677777654
No 262
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=1.4e-34 Score=304.61 Aligned_cols=244 Identities=24% Similarity=0.335 Sum_probs=197.5
Q ss_pred CccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccceeeec
Q 003703 456 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEY 529 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~--~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E~ 529 (801)
+|...+.||+|+||.||++... |..||+|.+..... .....+.+|+.++++++||||+++++++.+ ..++||||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 4777889999999999999874 78999999865432 334578899999999999999999999854 47899999
Q ss_pred CCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCC
Q 003703 530 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTL 609 (801)
Q Consensus 530 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~ 609 (801)
+++++|.+.+..... ..+++..++.|+.|++.||.|||+.+ ++|+||+|+|||++.++.++|+|||++........
T Consensus 81 ~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~ 156 (256)
T cd08218 81 CEGGDLYKKINAQRG-VLFPEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVE 156 (256)
T ss_pred CCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEEeeccceeecCcchh
Confidence 999999998865432 35788999999999999999999987 99999999999999999999999999987643221
Q ss_pred cCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhH--HHHHhhcCccccccCCCCCCCC
Q 003703 610 YLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWP 687 (801)
Q Consensus 610 ~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~--~~~~~~~g~~~~~~d~~~~~~~ 687 (801)
......|++.|+|||++.+..++.++|||||||++|+|+||+.||..... ....+..+.. ...+
T Consensus 157 ------~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~--------~~~~ 222 (256)
T cd08218 157 ------LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSY--------PPVS 222 (256)
T ss_pred ------hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCC--------CCCc
Confidence 12234688999999999988999999999999999999999999964332 1111222221 1123
Q ss_pred HHHHHHHHHHHHHhhhhCCCCCCCchHHHH
Q 003703 688 TFVARRLVDLGLQCCELYGRERPDITPSLV 717 (801)
Q Consensus 688 ~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~ 717 (801)
...+..+.+++.+||+.+|.+||++.+.+.
T Consensus 223 ~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 223 SHYSYDLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred ccCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 345668999999999999999999995543
No 263
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=2.5e-34 Score=302.16 Aligned_cols=243 Identities=26% Similarity=0.378 Sum_probs=196.0
Q ss_pred CccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEecccc--CCcceeeec
Q 003703 456 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEY 529 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~--~~~~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~LV~E~ 529 (801)
+|.....||+|+||.||++... +..+|+|.+..... .....+.+|+.++++++||||+++++.+. ...++||||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 4677789999999999998774 78999999876533 23456889999999999999999998874 347899999
Q ss_pred CCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCC-CCeeeecccceeeccCCC
Q 003703 530 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSE-LSSKICDFGICRLVTEDT 608 (801)
Q Consensus 530 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~-~~vKL~DFGla~~~~~~~ 608 (801)
+++++|.+++.... ...+++..+..++.+++.||.|||+.+ |+|+||+|+||+++.+ +.+||+|||++.......
T Consensus 81 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~ 156 (256)
T cd08220 81 APGGTLAEYIQKRC-NSLLDEDTILHFFVQILLALHHVHTKL---ILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS 156 (256)
T ss_pred CCCCCHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc
Confidence 99999999997643 245889999999999999999999987 9999999999999865 458999999998765432
Q ss_pred CcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHH--HhhcCccccccCCCCCCC
Q 003703 609 LYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRR--AVSCGKLSSILDPLAGDW 686 (801)
Q Consensus 609 ~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~--~~~~g~~~~~~d~~~~~~ 686 (801)
......|++.|+|||.+.+..++.++||||||+++|+|++|+.||...+.... .+..+... ..
T Consensus 157 -------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~--------~~ 221 (256)
T cd08220 157 -------KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFA--------PI 221 (256)
T ss_pred -------cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCCC--------CC
Confidence 12335689999999999888899999999999999999999999975432111 11111111 12
Q ss_pred CHHHHHHHHHHHHHhhhhCCCCCCCchHHHH
Q 003703 687 PTFVARRLVDLGLQCCELYGRERPDITPSLV 717 (801)
Q Consensus 687 ~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~ 717 (801)
+...+..+.+++.+||+.+|.+|||+.+.+.
T Consensus 222 ~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 222 SDRYSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred CCCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 2335567899999999999999999996554
No 264
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=3.4e-35 Score=309.27 Aligned_cols=245 Identities=32% Similarity=0.478 Sum_probs=193.5
Q ss_pred ccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcccHH--HHHHHHHHHhcCCCCceeeEecccc--CCcceeeecC
Q 003703 457 FSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQL--EFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYL 530 (801)
Q Consensus 457 f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~~~--~f~~E~~il~~l~HpnIV~l~g~~~--~~~~LV~E~~ 530 (801)
|...+.||+|+||+||+++.. +..||+|++......... ...+|+.++.+++||||+++++++. ...++||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 455678999999999999996 678999999877654333 3456999999999999999999984 4578999999
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCc
Q 003703 531 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLY 610 (801)
Q Consensus 531 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~ 610 (801)
++++|.+++... ..+++..++.++.|++.||.|||+.+ |+|+||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~L~~Lh~~~---i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~-- 152 (260)
T PF00069_consen 81 PGGSLQDYLQKN---KPLSEEEILKIAYQILEALAYLHSKG---IVHRDIKPENILLDENGEVKLIDFGSSVKLSENN-- 152 (260)
T ss_dssp TTEBHHHHHHHH---SSBBHHHHHHHHHHHHHHHHHHHHTT---EEESSBSGGGEEESTTSEEEESSGTTTEESTSTT--
T ss_pred cccccccccccc---cccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccc--
Confidence 999999999733 46789999999999999999999987 9999999999999999999999999998652211
Q ss_pred CCCccccCCCCCCCCCCCccccc-cCCCCcchhHHhHHHHHHHHHhCCCCCCChh--HHHHHhhcCccccccCCCCCCCC
Q 003703 611 LPSFHRSTAPKGSFPYADPEYHR-TGVLTPKSDSYSFGLIILQLLTGRLPVGLAG--EVRRAVSCGKLSSILDPLAGDWP 687 (801)
Q Consensus 611 ~~~~~~~~~~~Gt~~Y~APE~~~-~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~--~~~~~~~~g~~~~~~d~~~~~~~ 687 (801)
.......||+.|+|||++. +..++.++||||||+++|+|++|..||.... .....+............ ...
T Consensus 153 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 226 (260)
T PF00069_consen 153 ----ENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSS--QQS 226 (260)
T ss_dssp ----SEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHT--TSH
T ss_pred ----cccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccc--ccc
Confidence 1235567899999999998 8889999999999999999999999997551 111111111100000000 000
Q ss_pred HHHHHHHHHHHHHhhhhCCCCCCCchHH
Q 003703 688 TFVARRLVDLGLQCCELYGRERPDITPS 715 (801)
Q Consensus 688 ~~~~~~l~~Li~~Cl~~dP~~RPt~~e~ 715 (801)
......+.+++.+||+.||.+||++.+.
T Consensus 227 ~~~~~~l~~li~~~l~~~p~~R~~~~~l 254 (260)
T PF00069_consen 227 REKSEELRDLIKKMLSKDPEQRPSAEEL 254 (260)
T ss_dssp TTSHHHHHHHHHHHSSSSGGGSTTHHHH
T ss_pred chhHHHHHHHHHHHccCChhHCcCHHHH
Confidence 0113789999999999999999999843
No 265
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.1e-34 Score=322.30 Aligned_cols=190 Identities=21% Similarity=0.305 Sum_probs=160.6
Q ss_pred HHhcCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccceee
Q 003703 452 TATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVY 527 (801)
Q Consensus 452 ~at~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~ 527 (801)
....+|...+.||+|+||.||+|... +..||+|+.... .+..|+.++.+++|||||+++++|.+ ..++||
T Consensus 63 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 136 (357)
T PHA03209 63 VASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVL 136 (357)
T ss_pred hhhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEE
Confidence 34467999999999999999999986 578999975432 23469999999999999999998843 478999
Q ss_pred ecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCC
Q 003703 528 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 607 (801)
Q Consensus 528 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~ 607 (801)
||+ .|+|.+++.... ..++|..+..|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 137 e~~-~~~l~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 210 (357)
T PHA03209 137 PHY-SSDLYTYLTKRS--RPLPIDQALIIEKQILEGLRYLHAQR---IIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA 210 (357)
T ss_pred Ecc-CCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEecCccccccccC
Confidence 999 568888876543 46899999999999999999999987 999999999999999999999999998754322
Q ss_pred CCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCC
Q 003703 608 TLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPV 660 (801)
Q Consensus 608 ~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf 660 (801)
. ......||+.|+|||++.+..++.++|||||||++|||+++..|+
T Consensus 211 ~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 211 P-------AFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred c-------ccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 1 123456999999999999999999999999999999999965543
No 266
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=3.4e-34 Score=304.63 Aligned_cols=248 Identities=24% Similarity=0.358 Sum_probs=193.3
Q ss_pred CccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcc----------cHHHHHHHHHHHhcCCCCceeeEecccc--C
Q 003703 456 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ----------GQLEFQQEVRVLSKLQHPHLVTLLGACP--E 521 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~----------~~~~f~~E~~il~~l~HpnIV~l~g~~~--~ 521 (801)
+|...+.||.|+||.||+|... |..||+|.+...... ....+.+|+.++..++||||+++++++. +
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 4566778999999999999764 889999987532110 1235788999999999999999999984 3
Q ss_pred CcceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccce
Q 003703 522 AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGIC 601 (801)
Q Consensus 522 ~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla 601 (801)
..++||||+++|+|.+++... ..+++..+..++.||+.||.|||+.+ ++|+||+|+||+++.++.++|+|||++
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~~~nil~~~~~~~~l~d~~~~ 155 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTY---GRFEEQLVRFFTEQVLEGLAYLHSKG---ILHRDLKADNLLVDADGICKISDFGIS 155 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHhhCC---eeecCCChhhEEEcCCCeEEEeecccc
Confidence 578999999999999998665 36888999999999999999999987 999999999999999999999999999
Q ss_pred eeccCCCCcCCCccccCCCCCCCCCCCccccccCC--CCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhhc--Ccccc
Q 003703 602 RLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGV--LTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSC--GKLSS 677 (801)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~--~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~--g~~~~ 677 (801)
+....... ........|+..|+|||++.... ++.++||||||+++|+|++|..||............ .....
T Consensus 156 ~~~~~~~~----~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~ 231 (272)
T cd06629 156 KKSDDIYD----NDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAP 231 (272)
T ss_pred cccccccc----ccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCC
Confidence 76542211 11223456899999999987654 889999999999999999999999654433222211 11111
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 678 ILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 678 ~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
.+. ......++..+.+++.+||..+|..||++.+.+
T Consensus 232 ~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il 267 (272)
T cd06629 232 PIP---PDVSMNLSPVALDFLNACFTINPDNRPTARELL 267 (272)
T ss_pred cCC---ccccccCCHHHHHHHHHHhcCChhhCCCHHHHh
Confidence 111 112223467899999999999999999988543
No 267
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-36 Score=306.23 Aligned_cols=247 Identities=23% Similarity=0.321 Sum_probs=206.1
Q ss_pred ccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccc--cCCcceeeecCCC
Q 003703 457 FSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGAC--PEAWSLVYEYLPN 532 (801)
Q Consensus 457 f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~--~~~~~LV~E~~~~ 532 (801)
|....+||+|+||.||++.++ |..||||.+..+ .+..++..|+.++.+++.|++|++||.+ ..++.+|||||..
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGA 112 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGA 112 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCC
Confidence 556678999999999999775 999999987543 3456789999999999999999999976 3468899999999
Q ss_pred CchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCC
Q 003703 533 GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLP 612 (801)
Q Consensus 533 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~ 612 (801)
||+.+++.-+. .+|+.+++..|+...+.||.|||... -||||||..||||+.+|++||+|||.|..+.+...
T Consensus 113 GSiSDI~R~R~--K~L~E~EIs~iL~~TLKGL~YLH~~~---KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMA--- 184 (502)
T KOG0574|consen 113 GSISDIMRARR--KPLSEQEISAVLRDTLKGLQYLHDLK---KIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMA--- 184 (502)
T ss_pred CcHHHHHHHhc--CCccHHHHHHHHHHHHhHHHHHHHHH---HHHhhcccccEEEcccchhhhhhccccchhhhhHH---
Confidence 99999987655 57999999999999999999999987 79999999999999999999999999988765432
Q ss_pred CccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhhcCccccccCCCCCCCCHHHHH
Q 003703 613 SFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFVAR 692 (801)
Q Consensus 613 ~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~g~~~~~~d~~~~~~~~~~~~ 692 (801)
....+.|||-|||||++..-+|+.++||||||+...||..|++||.....++..+... .-.-|. -.-|...+.
T Consensus 185 ---KRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIP---T~PPPT-F~KPE~WS~ 257 (502)
T KOG0574|consen 185 ---KRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIP---TKPPPT-FKKPEEWSS 257 (502)
T ss_pred ---hhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEecc---CCCCCC-CCChHhhhh
Confidence 3467789999999999999999999999999999999999999998665543322110 000011 123556788
Q ss_pred HHHHHHHHhhhhCCCCCCCchHHHHHHH
Q 003703 693 RLVDLGLQCCELYGRERPDITPSLVKEL 720 (801)
Q Consensus 693 ~l~~Li~~Cl~~dP~~RPt~~e~l~~~L 720 (801)
.+.+++..||-..|++|-|+.+.+.+.+
T Consensus 258 ~F~DFi~~CLiK~PE~R~TA~~L~~H~F 285 (502)
T KOG0574|consen 258 EFNDFIRSCLIKKPEERKTALRLCEHTF 285 (502)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHhhhhh
Confidence 9999999999999999999886555544
No 268
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=3.4e-34 Score=305.17 Aligned_cols=250 Identities=28% Similarity=0.439 Sum_probs=198.1
Q ss_pred cCccccceeeecCceEEEEEEEC-------CeEEEEEEeccCCcc-cHHHHHHHHHHHhcCCCCceeeEeccccC--Ccc
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML-------GRTVAIKMLYSHNMQ-GQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWS 524 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~-------g~~vAiK~l~~~~~~-~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~ 524 (801)
.+|.....||.|+||.||+|+.. ...|++|.+...... ....|.+|+.++.+++||||++++++|.+ ..+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 46778888999999999999863 467999988654433 34578999999999999999999999854 578
Q ss_pred eeeecCCCCchhhhhhhcCCC------CCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecc
Q 003703 525 LVYEYLPNGSLQDRLFRKSNV------SPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDF 598 (801)
Q Consensus 525 LV~E~~~~gsL~~~L~~~~~~------~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DF 598 (801)
+||||+++|+|.+++...... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.++|+||
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNAR---FVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcC---cccCcCccceEEEeCCCcEEEccc
Confidence 999999999999998755421 26899999999999999999999988 999999999999999999999999
Q ss_pred cceeeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChhH--HHHHhhcCcc
Q 003703 599 GICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKL 675 (801)
Q Consensus 599 Gla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~~--~~~~~~~g~~ 675 (801)
|+++....... .......+++.|+|||.+.+..++.++|||||||++|+|++ |..||..... +......+.+
T Consensus 162 ~~~~~~~~~~~-----~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~~ 236 (275)
T cd05046 162 SLSKDVYNSEY-----YKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKL 236 (275)
T ss_pred ccccccCcccc-----cccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCCc
Confidence 99875432211 12234456788999999988889999999999999999999 8889864322 2222222222
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHH
Q 003703 676 SSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKEL 720 (801)
Q Consensus 676 ~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L 720 (801)
... .+...+..+.+++.+||+.+|.+||++. +++..|
T Consensus 237 ~~~-------~~~~~~~~l~~~i~~~l~~~p~~Rp~~~-~~l~~l 273 (275)
T cd05046 237 ELP-------VPEGCPSRLYKLMTRCWAVNPKDRPSFS-ELVSAL 273 (275)
T ss_pred CCC-------CCCCCCHHHHHHHHHHcCCCcccCCCHH-HHHHHh
Confidence 111 1122446889999999999999999998 455544
No 269
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=3.4e-34 Score=306.57 Aligned_cols=250 Identities=24% Similarity=0.324 Sum_probs=192.5
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccceeee
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYE 528 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~--~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E 528 (801)
++|.....||+|+||.||+|++. |..||+|++..... .....+.+|+.++.+++||||+++++++.. ..++|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 35777889999999999999885 88999999865432 233467899999999999999999998844 4789999
Q ss_pred cCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCC
Q 003703 529 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDT 608 (801)
Q Consensus 529 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~ 608 (801)
|+++++|..++... ..+++..+..++.|++.||.|||+.+ |+|+||||+||+++.++.+||+|||++.......
T Consensus 81 ~~~~~~l~~~~~~~---~~~~~~~~~~~~~ql~~~l~~LH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 154 (286)
T cd07847 81 YCDHTVLNELEKNP---RGVPEHLIKKIIWQTLQAVNFCHKHN---CIHRDVKPENILITKQGQIKLCDFGFARILTGPG 154 (286)
T ss_pred ccCccHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCChhhEEEcCCCcEEECccccceecCCCc
Confidence 99998888766432 35899999999999999999999987 9999999999999999999999999998765432
Q ss_pred CcCCCccccCCCCCCCCCCCcccccc-CCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhh----cCc---------
Q 003703 609 LYLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVS----CGK--------- 674 (801)
Q Consensus 609 ~~~~~~~~~~~~~Gt~~Y~APE~~~~-~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~----~g~--------- 674 (801)
. ......|+..|+|||++.+ ..++.++|||||||++|+|++|++||........... .+.
T Consensus 155 ~------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (286)
T cd07847 155 D------DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIF 228 (286)
T ss_pred c------cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhc
Confidence 1 1233458889999998865 5688999999999999999999999964332211110 000
Q ss_pred ----c-ccccCCCCC-C-----CCHHHHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 675 ----L-SSILDPLAG-D-----WPTFVARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 675 ----~-~~~~d~~~~-~-----~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
+ .....+... . +....+..+.+|+.+||+.+|.+||++.+.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil 281 (286)
T cd07847 229 STNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELL 281 (286)
T ss_pred ccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHh
Confidence 0 000001000 0 0112356789999999999999999998543
No 270
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=2.8e-34 Score=304.55 Aligned_cols=249 Identities=27% Similarity=0.356 Sum_probs=197.7
Q ss_pred HHhcCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcccHHHHHHHHHHHhcC-CCCceeeEeccccC-------
Q 003703 452 TATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKL-QHPHLVTLLGACPE------- 521 (801)
Q Consensus 452 ~at~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~~~~f~~E~~il~~l-~HpnIV~l~g~~~~------- 521 (801)
..+++|.....||.|+||.||+|... +..|++|++..... ....|.+|+.++.++ .||||++++++|.+
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND 81 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence 35688999999999999999999885 68899999876543 345789999999999 79999999999832
Q ss_pred -CcceeeecCCCCchhhhhhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeeccc
Q 003703 522 -AWSLVYEYLPNGSLQDRLFRKS-NVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFG 599 (801)
Q Consensus 522 -~~~LV~E~~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFG 599 (801)
..++||||+++++|.+++.... ....+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.+||+|||
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~---i~H~~l~p~ni~~~~~~~~~l~d~~ 158 (275)
T cd06608 82 DQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENK---VIHRDIKGQNILLTKNAEVKLVDFG 158 (275)
T ss_pred eEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEEccCCeEEECCCc
Confidence 2579999999999999886532 2356889999999999999999999987 9999999999999999999999999
Q ss_pred ceeeccCCCCcCCCccccCCCCCCCCCCCcccccc-----CCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHh--hc
Q 003703 600 ICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT-----GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAV--SC 672 (801)
Q Consensus 600 la~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~-----~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~--~~ 672 (801)
++....... .......|++.|+|||++.. ..++.++|||||||+||+|+||++||.......... ..
T Consensus 159 ~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~ 232 (275)
T cd06608 159 VSAQLDSTL------GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPR 232 (275)
T ss_pred cceecccch------hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhc
Confidence 987654322 12234568999999998753 357789999999999999999999996433222111 11
Q ss_pred CccccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 673 GKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 673 g~~~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
+.... ...+...+..+.+|+.+||..||.+|||+.+.+
T Consensus 233 ~~~~~------~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll 270 (275)
T cd06608 233 NPPPT------LKSPENWSKKFNDFISECLIKNYEQRPFMEELL 270 (275)
T ss_pred cCCCC------CCchhhcCHHHHHHHHHHhhcChhhCcCHHHHh
Confidence 11111 112233566889999999999999999998543
No 271
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=2.4e-34 Score=304.76 Aligned_cols=248 Identities=24% Similarity=0.403 Sum_probs=196.4
Q ss_pred CccccceeeecCceEEEEEEE--CCeEEEEEEeccCCc------ccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccce
Q 003703 456 NFSESFKVGQGGFGCVYKGEM--LGRTVAIKMLYSHNM------QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSL 525 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~--~g~~vAiK~l~~~~~------~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~L 525 (801)
+|.....||+|+||.||+|.. .+..||+|++..... .....+.+|+.++++++||||++++++|.+ ..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 467778999999999999987 488999999865432 123468899999999999999999999854 4789
Q ss_pred eeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCC-Ceeeecccceeec
Q 003703 526 VYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSEL-SSKICDFGICRLV 604 (801)
Q Consensus 526 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~-~vKL~DFGla~~~ 604 (801)
||||+++++|.+++... .++++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++ .+||+|||++...
T Consensus 81 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~ql~~al~~LH~~~---i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~ 154 (268)
T cd06630 81 FVEWMAGGSVSHLLSKY---GAFKEAVIINYTEQLLRGLSYLHENQ---IIHRDVKGANLLIDSTGQRLRIADFGAAARL 154 (268)
T ss_pred EEeccCCCcHHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEccccccccc
Confidence 99999999999998654 36889999999999999999999988 99999999999998776 5999999999876
Q ss_pred cCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhH---HHHHhhcCccccccCC
Q 003703 605 TEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE---VRRAVSCGKLSSILDP 681 (801)
Q Consensus 605 ~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~---~~~~~~~g~~~~~~d~ 681 (801)
........ .......||..|+|||++.+..++.++||||||+++|+|++|..||..... ......... ..
T Consensus 155 ~~~~~~~~--~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~-----~~ 227 (268)
T cd06630 155 AAKGTGAG--EFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIAS-----AT 227 (268)
T ss_pred ccccccCC--ccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhc-----cC
Confidence 54321111 112344689999999999888899999999999999999999999963221 111111000 01
Q ss_pred CCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 682 LAGDWPTFVARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 682 ~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
.....+...+..+.+++.+|+..+|.+||++.+.+
T Consensus 228 ~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll 262 (268)
T cd06630 228 TAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELL 262 (268)
T ss_pred CCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHh
Confidence 12334555678899999999999999999998543
No 272
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=1.3e-34 Score=310.07 Aligned_cols=250 Identities=25% Similarity=0.349 Sum_probs=192.7
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcc--cHHHHHHHHHHHhcCCCCceeeEeccccC--Ccceeee
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ--GQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYE 528 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~--~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E 528 (801)
++|...++||+|+||.||+|.+. +..||+|++...... ....+.+|+.++..++||||++++++|.. ..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 36777889999999999999985 789999998654332 34568899999999999999999999854 4789999
Q ss_pred cCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCC
Q 003703 529 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDT 608 (801)
Q Consensus 529 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~ 608 (801)
|+++++|..+.... ..++|..++.++.||+.||.|||+.+ |+|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~~---i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~ 154 (286)
T cd07846 81 FVDHTVLDDLEKYP---NGLDESRVRKYLFQILRGIEFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG 154 (286)
T ss_pred cCCccHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc
Confidence 99999988766443 24899999999999999999999987 9999999999999999999999999998764332
Q ss_pred CcCCCccccCCCCCCCCCCCcccccc-CCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHH---hh-cCccc-------
Q 003703 609 LYLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRA---VS-CGKLS------- 676 (801)
Q Consensus 609 ~~~~~~~~~~~~~Gt~~Y~APE~~~~-~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~---~~-~g~~~------- 676 (801)
. ......|+..|+|||++.+ ..++.++|||||||++|||++|++||......... .. .+.+.
T Consensus 155 ~------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (286)
T cd07846 155 E------VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIF 228 (286)
T ss_pred c------ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHh
Confidence 1 1234568899999998865 45788999999999999999999999643321110 00 00000
Q ss_pred -------cccCCCCC------CCCHHHHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 677 -------SILDPLAG------DWPTFVARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 677 -------~~~d~~~~------~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
.+..+... ......+..+.+|+.+||+.+|.+||++.+.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il 281 (286)
T cd07846 229 QKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLL 281 (286)
T ss_pred ccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHh
Confidence 00000000 01113456799999999999999999998544
No 273
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=6e-34 Score=302.82 Aligned_cols=247 Identities=25% Similarity=0.363 Sum_probs=184.7
Q ss_pred eeeecCceEEEEEEEC-C---eEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEeccccC--CcceeeecCCCCc
Q 003703 462 KVGQGGFGCVYKGEML-G---RTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYLPNGS 534 (801)
Q Consensus 462 ~LG~G~fG~Vy~g~~~-g---~~vAiK~l~~~~~-~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E~~~~gs 534 (801)
.||+|+||.||+|... + ..+++|.+..... .....|.+|+.++..++||||++++++|.+ ..++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 5999999999999753 2 3567777665432 345679999999999999999999999854 4789999999999
Q ss_pred hhhhhhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCCC
Q 003703 535 LQDRLFRKSN-VSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPS 613 (801)
Q Consensus 535 L~~~L~~~~~-~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~~ 613 (801)
|.+++..... ...+++.....++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++........
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~---- 154 (268)
T cd05086 82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHN---FLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDY---- 154 (268)
T ss_pred HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC---eeccCCccceEEEcCCccEEecccccccccCcchh----
Confidence 9999976432 245667778899999999999999987 99999999999999999999999999864322111
Q ss_pred ccccCCCCCCCCCCCcccccc-------CCCCcchhHHhHHHHHHHHHh-CCCCCCChhH--HHHHhhcCccccccCCCC
Q 003703 614 FHRSTAPKGSFPYADPEYHRT-------GVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKLSSILDPLA 683 (801)
Q Consensus 614 ~~~~~~~~Gt~~Y~APE~~~~-------~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~~--~~~~~~~g~~~~~~d~~~ 683 (801)
........|++.|+|||++.. ..++.++|||||||++|||++ |..||..... ....+..+....+.++..
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (268)
T cd05086 155 IETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQL 234 (268)
T ss_pred hhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCcc
Confidence 011234568899999998743 345789999999999999997 5778854332 122222222233333322
Q ss_pred CCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHH
Q 003703 684 GDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKEL 720 (801)
Q Consensus 684 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L 720 (801)
+......+.+++..|| .+|.+||++. ++++.|
T Consensus 235 ---~~~~~~~~~~l~~~c~-~~P~~Rp~~~-~i~~~l 266 (268)
T cd05086 235 ---ELPYSERWYEVLQFCW-LSPEKRATAE-EVHRLL 266 (268)
T ss_pred ---CCCCcHHHHHHHHHHh-hCcccCCCHH-HHHHHh
Confidence 2224467888999999 6899999999 565554
No 274
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=5.3e-34 Score=300.87 Aligned_cols=246 Identities=27% Similarity=0.404 Sum_probs=200.8
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccceeeec
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEY 529 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~-~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E~ 529 (801)
++|...+.||.|+||.||+++.. |..||+|++..... .....+.+|+.++.+++||||+++++++.. ..++||||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY 80 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence 36778889999999999999885 88999999876654 345678999999999999999999998854 57899999
Q ss_pred CCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCC
Q 003703 530 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHS-SKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDT 608 (801)
Q Consensus 530 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~-~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~ 608 (801)
+++++|.+++... ..+++..++.++.|++.||.|||+ .+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~L~~~l~~~---~~l~~~~~~~~~~~l~~~l~~lh~~~~---~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~ 154 (264)
T cd06623 81 MDGGSLADLLKKV---GKIPEPVLAYIARQILKGLDYLHTKRH---IIHRDIKPSNLLINSKGEVKIADFGISKVLENTL 154 (264)
T ss_pred cCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHhccCC---CccCCCCHHHEEECCCCCEEEccCccceecccCC
Confidence 9999999999765 468899999999999999999999 87 9999999999999999999999999998765433
Q ss_pred CcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChh--HHHHHhhcCccccccCCCCCCC
Q 003703 609 LYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAG--EVRRAVSCGKLSSILDPLAGDW 686 (801)
Q Consensus 609 ~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~--~~~~~~~~g~~~~~~d~~~~~~ 686 (801)
. ......|+..|+|||.+.+..++.++||||||+++|+|+||+.||.... .....+.. +........
T Consensus 155 ~------~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~-----~~~~~~~~~ 223 (264)
T cd06623 155 D------QCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQA-----ICDGPPPSL 223 (264)
T ss_pred C------cccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHH-----HhcCCCCCC
Confidence 1 1124568899999999999999999999999999999999999997553 11111111 011111122
Q ss_pred CHH-HHHHHHHHHHHhhhhCCCCCCCchHHHH
Q 003703 687 PTF-VARRLVDLGLQCCELYGRERPDITPSLV 717 (801)
Q Consensus 687 ~~~-~~~~l~~Li~~Cl~~dP~~RPt~~e~l~ 717 (801)
+.. .+..+.+++.+||..+|.+||++.+.+.
T Consensus 224 ~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~ 255 (264)
T cd06623 224 PAEEFSPEFRDFISACLQKDPKKRPSAAELLQ 255 (264)
T ss_pred CcccCCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 333 5678999999999999999999985443
No 275
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=2.8e-34 Score=307.33 Aligned_cols=250 Identities=25% Similarity=0.320 Sum_probs=190.8
Q ss_pred CccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccceeeec
Q 003703 456 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEY 529 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~--~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E~ 529 (801)
+|.....||.|+||.||+|+.. |..||||.+..... .....+.+|+.++.+++||||+++++++.+ ..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 4778889999999999999884 88999999865432 223468899999999999999999999853 57899999
Q ss_pred CCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCC
Q 003703 530 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTL 609 (801)
Q Consensus 530 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~ 609 (801)
+. ++|.+++.... ...+++..+..++.+++.||.|||..+ ++|+||+|+||+++.++.+||+|||++........
T Consensus 81 ~~-~~l~~~~~~~~-~~~l~~~~~~~~~~~i~~~l~~lh~~~---i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~ 155 (284)
T cd07860 81 LH-QDLKKFMDASP-LSGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 155 (284)
T ss_pred cc-cCHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEeeccchhhcccCcc
Confidence 95 68888876543 246899999999999999999999987 99999999999999999999999999876543221
Q ss_pred cCCCccccCCCCCCCCCCCccccccCC-CCcchhHHhHHHHHHHHHhCCCCCCChhHHHHH---hhc-Cccc--------
Q 003703 610 YLPSFHRSTAPKGSFPYADPEYHRTGV-LTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRA---VSC-GKLS-------- 676 (801)
Q Consensus 610 ~~~~~~~~~~~~Gt~~Y~APE~~~~~~-~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~---~~~-g~~~-------- 676 (801)
......+++.|+|||++.+.. ++.++|||||||++|+|+||+.||......... +.. +...
T Consensus 156 ------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (284)
T cd07860 156 ------TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 229 (284)
T ss_pred ------ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhh
Confidence 123345788999999886644 688999999999999999999999644322111 110 0000
Q ss_pred ----------cccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 677 ----------SILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 677 ----------~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
..............+..+.+++.+||+.||.+||++.+.+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l 279 (284)
T cd07860 230 SLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAAL 279 (284)
T ss_pred HHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHh
Confidence 0000000011112345778999999999999999998543
No 276
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=5.8e-34 Score=299.26 Aligned_cols=243 Identities=34% Similarity=0.548 Sum_probs=196.3
Q ss_pred cccceeeecCceEEEEEEECC------eEEEEEEeccCCcc-cHHHHHHHHHHHhcCCCCceeeEeccccC--Ccceeee
Q 003703 458 SESFKVGQGGFGCVYKGEMLG------RTVAIKMLYSHNMQ-GQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYE 528 (801)
Q Consensus 458 ~~~~~LG~G~fG~Vy~g~~~g------~~vAiK~l~~~~~~-~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E 528 (801)
.....||.|+||.||++.... ..||+|++...... ....+..|+.++..++||||+++++++.+ ..+++||
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e 81 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVME 81 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEe
Confidence 455689999999999998863 78999999766544 45678999999999999999999999854 5789999
Q ss_pred cCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCC
Q 003703 529 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDT 608 (801)
Q Consensus 529 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~ 608 (801)
|+++++|.+++..... ..+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 82 ~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lh~~~---~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 157 (258)
T smart00219 82 YMEGGDLLDYLRKNRP-KELSLSDLLSFALQIARGMEYLESKN---FIHRDLAARNCLVGENLVVKISDFGLSRDLYDDD 157 (258)
T ss_pred ccCCCCHHHHHHhhhh-ccCCHHHHHHHHHHHHHHHHHHhcCC---eeecccccceEEEccCCeEEEcccCCceeccccc
Confidence 9999999999876432 12899999999999999999999987 9999999999999999999999999998776543
Q ss_pred CcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChh--HHHHHhhcCccccccCCCCCC
Q 003703 609 LYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAG--EVRRAVSCGKLSSILDPLAGD 685 (801)
Q Consensus 609 ~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~--~~~~~~~~g~~~~~~d~~~~~ 685 (801)
.. ......+++.|+|||.+.+..++.++||||||+++|+|++ |.+||.... .....+..+... .
T Consensus 158 ~~-----~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~--------~ 224 (258)
T smart00219 158 YY-----KKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYRL--------P 224 (258)
T ss_pred cc-----ccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCC--------C
Confidence 21 1112347889999999988889999999999999999999 888986322 222333333221 1
Q ss_pred CCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHH
Q 003703 686 WPTFVARRLVDLGLQCCELYGRERPDITPSLVK 718 (801)
Q Consensus 686 ~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~ 718 (801)
.+...+..+.+++.+|+..+|.+|||+. .+.+
T Consensus 225 ~~~~~~~~~~~~i~~~l~~~p~~Rpt~~-~ll~ 256 (258)
T smart00219 225 KPENCPPEIYKLMLQCWAEDPEDRPTFS-ELVE 256 (258)
T ss_pred CCCcCCHHHHHHHHHHCcCChhhCcCHH-HHHh
Confidence 1222566899999999999999999998 4443
No 277
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=7.3e-34 Score=308.15 Aligned_cols=254 Identities=21% Similarity=0.236 Sum_probs=196.1
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccceee
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVY 527 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~---~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~ 527 (801)
++|...+.||+|+||.||++... +..||+|.+..... .....+.+|+.++..++||||+++++.+.. ..++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 36788889999999999999885 78999999876543 223467899999999999999999998854 368999
Q ss_pred ecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCC
Q 003703 528 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 607 (801)
Q Consensus 528 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~ 607 (801)
||++||+|.+++... ..+++..+..++.+++.||.|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 81 e~~~g~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~ 154 (305)
T cd05609 81 EYVEGGDCATLLKNI---GALPVDMARMYFAETVLALEYLHNYG---IVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMS 154 (305)
T ss_pred ecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHEEECCCCCEEEeeCCCccccCcC
Confidence 999999999998654 35889999999999999999999987 999999999999999999999999998742111
Q ss_pred CCc---------CCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChh--HHHHHhhcCccc
Q 003703 608 TLY---------LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAG--EVRRAVSCGKLS 676 (801)
Q Consensus 608 ~~~---------~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~--~~~~~~~~g~~~ 676 (801)
... ...........|+..|+|||++....++.++|||||||++|||++|..||.... .+......+...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~ 234 (305)
T cd05609 155 LTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIE 234 (305)
T ss_pred ccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccC
Confidence 000 000011123468889999999988899999999999999999999999996432 222222222211
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHH
Q 003703 677 SILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELE 721 (801)
Q Consensus 677 ~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~ 721 (801)
.+.. +...+..+.+++.+||+.+|.+||+.. .+.+.|+
T Consensus 235 ---~~~~---~~~~~~~~~~li~~~l~~~P~~R~~~~-~~~~ll~ 272 (305)
T cd05609 235 ---WPEG---DEALPADAQDLISRLLRQNPLERLGTG-GAFEVKQ 272 (305)
T ss_pred ---CCCc---cccCCHHHHHHHHHHhccChhhccCcc-CHHHHHh
Confidence 1111 112456789999999999999999975 3444444
No 278
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-33 Score=295.30 Aligned_cols=255 Identities=27% Similarity=0.405 Sum_probs=200.1
Q ss_pred HHhcCccccceeeecCceEEEEEEEC--CeEEEEEEeccC-CcccH------HHHHHHHHHHhcCCCCceeeEeccc---
Q 003703 452 TATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSH-NMQGQ------LEFQQEVRVLSKLQHPHLVTLLGAC--- 519 (801)
Q Consensus 452 ~at~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~-~~~~~------~~f~~E~~il~~l~HpnIV~l~g~~--- 519 (801)
...++|-...+||+|||+.||++-+. .+.||+|+-... .+.+. +...+|.+|-..|.||-||++|++|
T Consensus 460 tLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslD 539 (775)
T KOG1151|consen 460 TLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLD 539 (775)
T ss_pred chHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeec
Confidence 34456777788999999999999764 788999986433 22211 2356899999999999999999998
Q ss_pred cCCcceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecC---CCCeeee
Q 003703 520 PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDS---ELSSKIC 596 (801)
Q Consensus 520 ~~~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~---~~~vKL~ 596 (801)
.+..|-|+|||+|.+|.-+|..+. .++..++..|+.||+.||.||.... +||||-||||.||||-+ -|.+||.
T Consensus 540 tdsFCTVLEYceGNDLDFYLKQhk---lmSEKEARSIiMQiVnAL~YLNEik-pPIIHYDLKPgNILLv~GtacGeIKIT 615 (775)
T KOG1151|consen 540 TDSFCTVLEYCEGNDLDFYLKQHK---LMSEKEARSIIMQIVNALKYLNEIK-PPIIHYDLKPGNILLVNGTACGEIKIT 615 (775)
T ss_pred cccceeeeeecCCCchhHHHHhhh---hhhHHHHHHHHHHHHHHHHHHhccC-CCeeeeccCCccEEEecCcccceeEee
Confidence 346889999999999999997664 5778999999999999999999998 58999999999999954 4789999
Q ss_pred cccceeeccCCCCc-CCCccccCCCCCCCCCCCccccccC----CCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhh
Q 003703 597 DFGICRLVTEDTLY-LPSFHRSTAPKGSFPYADPEYHRTG----VLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVS 671 (801)
Q Consensus 597 DFGla~~~~~~~~~-~~~~~~~~~~~Gt~~Y~APE~~~~~----~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~ 671 (801)
||||++.+..+... ......+....||.+|++||.|.-+ +.+.|+||||+|||+|.++.|+.||+....-...+.
T Consensus 616 DFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILq 695 (775)
T KOG1151|consen 616 DFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQ 695 (775)
T ss_pred ecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHh
Confidence 99999998766543 2233345677899999999977543 578899999999999999999999986544434343
Q ss_pred cCccccccCCCCCCCC--HHHHHHHHHHHHHhhhhCCCCCCCch
Q 003703 672 CGKLSSILDPLAGDWP--TFVARRLVDLGLQCCELYGRERPDIT 713 (801)
Q Consensus 672 ~g~~~~~~d~~~~~~~--~~~~~~l~~Li~~Cl~~dP~~RPt~~ 713 (801)
...+.. ..--.+| +.++.....+|.+||++.-++|.+..
T Consensus 696 eNTIlk---AtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~ 736 (775)
T KOG1151|consen 696 ENTILK---ATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQ 736 (775)
T ss_pred hhchhc---ceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHH
Confidence 333222 1111222 24667888999999999999998765
No 279
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=4.6e-34 Score=305.27 Aligned_cols=246 Identities=24% Similarity=0.377 Sum_probs=188.1
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc-ccHHHHHHHHHH-HhcCCCCceeeEecccc--CCcceeee
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM-QGQLEFQQEVRV-LSKLQHPHLVTLLGACP--EAWSLVYE 528 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~-~~~~~f~~E~~i-l~~l~HpnIV~l~g~~~--~~~~LV~E 528 (801)
++|.....||+|+||.||+|... |..||||++..... .....+..|+.+ ++.++||||+++++++. ...++|||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 36888889999999999999885 89999999876532 234456667665 55668999999999984 45789999
Q ss_pred cCCCCchhhhhhhc-CCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCceeeCCCCCCCeeecCCCCeeeecccceeeccC
Q 003703 529 YLPNGSLQDRLFRK-SNVSPLLWKDRARIAAEIASGLCFLHSS-KPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTE 606 (801)
Q Consensus 529 ~~~~gsL~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~yLH~~-~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~ 606 (801)
|++ |+|.+.+... .....+++..++.++.||+.||.|||+. + ++||||||+|||++.++.+||+|||++.....
T Consensus 81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~---i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 156 (283)
T cd06617 81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLS---VIHRDVKPSNVLINRNGQVKLCDFGISGYLVD 156 (283)
T ss_pred hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeeccccccccc
Confidence 996 7888877543 2235689999999999999999999986 5 99999999999999999999999999986643
Q ss_pred CCCcCCCccccCCCCCCCCCCCcccccc----CCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhhcCccccccCCC
Q 003703 607 DTLYLPSFHRSTAPKGSFPYADPEYHRT----GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPL 682 (801)
Q Consensus 607 ~~~~~~~~~~~~~~~Gt~~Y~APE~~~~----~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~g~~~~~~d~~ 682 (801)
.. ......|+..|+|||++.+ ..++.++|+|||||++|+|++|+.||.........+. ..+...
T Consensus 157 ~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~-----~~~~~~ 224 (283)
T cd06617 157 SV-------AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLK-----QVVEEP 224 (283)
T ss_pred cc-------ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHH-----HHHhcC
Confidence 21 1233468899999998754 4578999999999999999999999964221111110 000000
Q ss_pred CCCCC-HHHHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 683 AGDWP-TFVARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 683 ~~~~~-~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
....+ ...+..+.+++.+||..+|.+||++.+.+
T Consensus 225 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il 259 (283)
T cd06617 225 SPQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELL 259 (283)
T ss_pred CCCCCccccCHHHHHHHHHHccCChhhCcCHHHHh
Confidence 01111 12456789999999999999999998544
No 280
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=6.8e-34 Score=306.84 Aligned_cols=250 Identities=26% Similarity=0.378 Sum_probs=200.4
Q ss_pred cCccccceeeecCceEEEEEEE--CCeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEecccc--CCcceeeecC
Q 003703 455 CNFSESFKVGQGGFGCVYKGEM--LGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYL 530 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~--~g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~LV~E~~ 530 (801)
.+|...+.||+|+||.||+|.. .+..||+|.+..........+.+|+.++..++||||++++++|. +..++|+||+
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~ 98 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL 98 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence 5778888999999999999976 47889999987655555567889999999999999999999884 4578999999
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCc
Q 003703 531 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLY 610 (801)
Q Consensus 531 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~ 610 (801)
++++|.+++... .+++..+..++.+++.||.|||+.+ ++|+||||+||+++.++.+||+|||++........
T Consensus 99 ~~~~L~~~~~~~----~l~~~~~~~i~~~l~~al~~LH~~g---i~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~- 170 (293)
T cd06647 99 AGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS- 170 (293)
T ss_pred CCCcHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhCC---EeeccCCHHHEEEcCCCCEEEccCcceeccccccc-
Confidence 999999988543 4788999999999999999999988 99999999999999999999999999876643321
Q ss_pred CCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhhcCccccccCCCCCCCCHHH
Q 003703 611 LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFV 690 (801)
Q Consensus 611 ~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~g~~~~~~d~~~~~~~~~~ 690 (801)
......|++.|++||++....++.++|||||||++|+|++|+.||............+.... + ....+...
T Consensus 171 -----~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~---~-~~~~~~~~ 241 (293)
T cd06647 171 -----KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGT---P-ELQNPEKL 241 (293)
T ss_pred -----ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcCCC---C-CCCCcccc
Confidence 12344689999999999888899999999999999999999999975433221111110000 0 01112235
Q ss_pred HHHHHHHHHHhhhhCCCCCCCchHHHHHHHH
Q 003703 691 ARRLVDLGLQCCELYGRERPDITPSLVKELE 721 (801)
Q Consensus 691 ~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~ 721 (801)
+..+.+++.+||..+|.+||++.+.+.+.+-
T Consensus 242 ~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~ 272 (293)
T cd06647 242 SAIFRDFLNRCLEMDVEKRGSAKELLQHPFL 272 (293)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHhcCHHH
Confidence 5678999999999999999999966655443
No 281
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=5.7e-34 Score=303.76 Aligned_cols=243 Identities=25% Similarity=0.416 Sum_probs=193.7
Q ss_pred CccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCC---CCceeeEeccccC--Ccceee
Q 003703 456 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQ---HPHLVTLLGACPE--AWSLVY 527 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~-~~~~~f~~E~~il~~l~---HpnIV~l~g~~~~--~~~LV~ 527 (801)
.|...+.||.|+||.||+|.+. +..||+|.+..... .....+.+|+.++++++ |||+++++++|.+ ..++||
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 4666778999999999999874 88999999875433 33456889999999996 9999999998854 478999
Q ss_pred ecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCC
Q 003703 528 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 607 (801)
Q Consensus 528 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~ 607 (801)
||+++++|.+++... .+++...+.++.+++.||.|||+.+ |+|+||+|+||+++.++.++|+|||++......
T Consensus 82 e~~~~~~L~~~~~~~----~l~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 154 (277)
T cd06917 82 EYAEGGSVRTLMKAG----PIAEKYISVIIREVLVALKYIHKVG---VIHRDIKAANILVTNTGNVKLCDFGVAALLNQN 154 (277)
T ss_pred ecCCCCcHHHHHHcc----CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHHEEEcCCCCEEEccCCceeecCCC
Confidence 999999999987542 6889999999999999999999988 999999999999999999999999999877543
Q ss_pred CCcCCCccccCCCCCCCCCCCccccccC-CCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhhcCccccccCCCCCCC
Q 003703 608 TLYLPSFHRSTAPKGSFPYADPEYHRTG-VLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDW 686 (801)
Q Consensus 608 ~~~~~~~~~~~~~~Gt~~Y~APE~~~~~-~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~g~~~~~~d~~~~~~ 686 (801)
.. ......|+..|+|||++.++ .++.++|||||||++|+|++|..||.............. .. ...+
T Consensus 155 ~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~---~~---~~~~ 222 (277)
T cd06917 155 SS------KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPK---SK---PPRL 222 (277)
T ss_pred cc------ccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhcccc---CC---CCCC
Confidence 31 12345689999999988654 568999999999999999999999975443221111100 00 1111
Q ss_pred CH-HHHHHHHHHHHHhhhhCCCCCCCchHHHH
Q 003703 687 PT-FVARRLVDLGLQCCELYGRERPDITPSLV 717 (801)
Q Consensus 687 ~~-~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~ 717 (801)
+. ..+..+.+++.+||+.||.+||++.+.+.
T Consensus 223 ~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 223 EDNGYSKLLREFVAACLDEEPKERLSAEELLK 254 (277)
T ss_pred CcccCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence 11 14567899999999999999999985544
No 282
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=5e-34 Score=306.50 Aligned_cols=241 Identities=23% Similarity=0.341 Sum_probs=194.1
Q ss_pred ccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEecccc--CCcceeeecCCC
Q 003703 457 FSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYLPN 532 (801)
Q Consensus 457 f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~LV~E~~~~ 532 (801)
|....+||+|+||.||++... +..|++|++..........+.+|+.++..++||||+++++++. +..++|+||+++
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~ 100 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEG 100 (285)
T ss_pred hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCC
Confidence 444568999999999999874 7899999986555445556889999999999999999999873 467899999999
Q ss_pred CchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCC
Q 003703 533 GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLP 612 (801)
Q Consensus 533 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~ 612 (801)
++|.+++.. ..+++..+..++.+++.||.|||+.+ |+||||+|+||+++.++.++|+|||++........
T Consensus 101 ~~L~~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~--- 170 (285)
T cd06648 101 GALTDIVTH----TRMNEEQIATVCLAVLKALSFLHAQG---VIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVP--- 170 (285)
T ss_pred CCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChhhEEEcCCCcEEEcccccchhhccCCc---
Confidence 999998865 35788999999999999999999988 99999999999999999999999998876543221
Q ss_pred CccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHH--HHhhcCccccccCCCCCCCCHHH
Q 003703 613 SFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVR--RAVSCGKLSSILDPLAGDWPTFV 690 (801)
Q Consensus 613 ~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~--~~~~~g~~~~~~d~~~~~~~~~~ 690 (801)
......|++.|+|||++.+..++.++|||||||++|+|++|+.||....... ..+..+.. +. ...+...
T Consensus 171 ---~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~ 241 (285)
T cd06648 171 ---RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLP-----PK-LKNLHKV 241 (285)
T ss_pred ---ccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcCC-----CC-CcccccC
Confidence 1234568999999999988889999999999999999999999986433221 11211111 11 1112224
Q ss_pred HHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 691 ARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 691 ~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
+..+.+++.+||+.+|.+||++.+.+
T Consensus 242 ~~~l~~li~~~l~~~p~~Rpt~~~il 267 (285)
T cd06648 242 SPRLRSFLDRMLVRDPAQRATAAELL 267 (285)
T ss_pred CHHHHHHHHHHcccChhhCcCHHHHc
Confidence 56899999999999999999998544
No 283
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=1e-33 Score=302.35 Aligned_cols=241 Identities=27% Similarity=0.390 Sum_probs=194.8
Q ss_pred ccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEecccc--CCcceeeecCC
Q 003703 457 FSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYLP 531 (801)
Q Consensus 457 f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~-~~~~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~LV~E~~~ 531 (801)
|.....||.|+||.||+|... +..||||.+..... .....|.+|+.++.+++||||+++++++. +..++||||++
T Consensus 6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06641 6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLG 85 (277)
T ss_pred hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCC
Confidence 566678999999999999874 78999999865433 23356889999999999999999999984 35789999999
Q ss_pred CCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcC
Q 003703 532 NGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYL 611 (801)
Q Consensus 532 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~ 611 (801)
+|+|.+++.. ..+++..+..++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++..+.....
T Consensus 86 ~~~l~~~i~~----~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~-- 156 (277)
T cd06641 86 GGSALDLLEP----GPLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI-- 156 (277)
T ss_pred CCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHccCC---eecCCCCHHhEEECCCCCEEEeecccceecccchh--
Confidence 9999998853 35789999999999999999999987 99999999999999999999999999887643221
Q ss_pred CCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHH--HHhhcCccccccCCCCCCCCHH
Q 003703 612 PSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVR--RAVSCGKLSSILDPLAGDWPTF 689 (801)
Q Consensus 612 ~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~--~~~~~g~~~~~~d~~~~~~~~~ 689 (801)
......|+..|+|||++.+..++.++|||||||++|+|++|..||....... ..+..+. ....+..
T Consensus 157 ----~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~--------~~~~~~~ 224 (277)
T cd06641 157 ----KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNN--------PPTLEGN 224 (277)
T ss_pred ----hhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcCC--------CCCCCcc
Confidence 1233468899999999988889999999999999999999999997433221 1111111 1122333
Q ss_pred HHHHHHHHHHHhhhhCCCCCCCchHHHHH
Q 003703 690 VARRLVDLGLQCCELYGRERPDITPSLVK 718 (801)
Q Consensus 690 ~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~ 718 (801)
.+..+.+++.+||+.+|.+||++.+.+.+
T Consensus 225 ~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 225 YSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred cCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 45678899999999999999999965543
No 284
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=9.7e-34 Score=304.62 Aligned_cols=252 Identities=23% Similarity=0.369 Sum_probs=190.5
Q ss_pred HhcCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCccc-HHHHHHHHHHHhcCCCCceeeEeccccC--Ccceee
Q 003703 453 ATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQG-QLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVY 527 (801)
Q Consensus 453 at~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~-~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~ 527 (801)
++.+|...+.||+|+||.||+|... |..||+|++....... ...+.+|+.++..++|+||+++++++.+ ..++||
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence 4578889999999999999999874 8899999986554322 3457789999999999999999998854 478999
Q ss_pred ecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCC
Q 003703 528 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 607 (801)
Q Consensus 528 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~ 607 (801)
||+. ++|.+.+.... ..+++..+..++.|++.||.|||+.+ |+|+||||+|||++.++.+||+|||+++.....
T Consensus 83 e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~ 156 (291)
T cd07870 83 EYMH-TDLAQYMIQHP--GGLHPYNVRLFMFQLLRGLAYIHGQH---ILHRDLKPQNLLISYLGELKLADFGLARAKSIP 156 (291)
T ss_pred eccc-CCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEEcCCCcEEEeccccccccCCC
Confidence 9995 67776665432 35788889999999999999999987 999999999999999999999999998764322
Q ss_pred CCcCCCccccCCCCCCCCCCCcccccc-CCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhhc-----C--------
Q 003703 608 TLYLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSC-----G-------- 673 (801)
Q Consensus 608 ~~~~~~~~~~~~~~Gt~~Y~APE~~~~-~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~-----g-------- 673 (801)
.. ......+++.|+|||++.+ ..++.++|||||||++|+|+||+.||.........+.. |
T Consensus 157 ~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (291)
T cd07870 157 SQ------TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWP 230 (291)
T ss_pred CC------CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhh
Confidence 11 1233457899999998865 45889999999999999999999999744332111110 0
Q ss_pred ---ccccccCCC-----CCC----CC-HHHHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 674 ---KLSSILDPL-----AGD----WP-TFVARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 674 ---~~~~~~d~~-----~~~----~~-~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
.+....... ... +. ......+.+++.+|+..||.+|||+.+.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l 286 (291)
T cd07870 231 GVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDAL 286 (291)
T ss_pred hhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHh
Confidence 000000000 000 00 01245788999999999999999998544
No 285
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=4.7e-34 Score=307.96 Aligned_cols=249 Identities=25% Similarity=0.324 Sum_probs=192.2
Q ss_pred CccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcc-----cHHHHHHHHHHHhcCCCCceeeEeccccC--Cccee
Q 003703 456 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ-----GQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLV 526 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~-----~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV 526 (801)
+|...+.||+|+||.||+|... |..||||.+...... ....+..|+.++.+++|+||+++++++.+ ..++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 3667778999999999999875 789999999765433 23346789999999999999999999854 47899
Q ss_pred eecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccC
Q 003703 527 YEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTE 606 (801)
Q Consensus 527 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~ 606 (801)
|||+ +|+|.+++.... ..+++..+..|+.||+.||.|||+.+ |+|+||+|+|||++.++.++|+|||+++....
T Consensus 81 ~e~~-~~~L~~~i~~~~--~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~ 154 (298)
T cd07841 81 FEFM-ETDLEKVIKDKS--IVLTPADIKSYMLMTLRGLEYLHSNW---ILHRDLKPNNLLIASDGVLKLADFGLARSFGS 154 (298)
T ss_pred Eccc-CCCHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCChhhEEEcCCCCEEEccceeeeeccC
Confidence 9999 999999986543 36899999999999999999999988 99999999999999999999999999987654
Q ss_pred CCCcCCCccccCCCCCCCCCCCcccccc-CCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHH---Hhhc-C--------
Q 003703 607 DTLYLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRR---AVSC-G-------- 673 (801)
Q Consensus 607 ~~~~~~~~~~~~~~~Gt~~Y~APE~~~~-~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~---~~~~-g-------- 673 (801)
... ......+++.|+|||++.+ ..++.++|||||||++|||++|.+||........ .... +
T Consensus 155 ~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (298)
T cd07841 155 PNR------KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWP 228 (298)
T ss_pred CCc------cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhh
Confidence 321 1233457889999998854 4678999999999999999999888753332111 0000 0
Q ss_pred ---ccccccCC------CCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 674 ---KLSSILDP------LAGDWPTFVARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 674 ---~~~~~~d~------~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
........ .........+..+.+++.+||..+|.+||++.+.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l 280 (298)
T cd07841 229 GVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQAL 280 (298)
T ss_pred hcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHh
Confidence 00000000 00011123467899999999999999999998544
No 286
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=6.6e-34 Score=304.20 Aligned_cols=251 Identities=22% Similarity=0.299 Sum_probs=193.1
Q ss_pred CccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcc-cHHHHHHHHHHHhcCCCCceeeEeccccC--CcceeeecC
Q 003703 456 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ-GQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYL 530 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~-~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E~~ 530 (801)
+|...++||.|+||.||+|+.. |..||||.+...... ....+.+|+.++.+++||||++++++|.+ ..++||||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 5777889999999999999985 889999998765433 34567789999999999999999999854 578999999
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCc
Q 003703 531 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLY 610 (801)
Q Consensus 531 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~ 610 (801)
++ +|.+++........+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++........
T Consensus 81 ~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~- 155 (284)
T cd07836 81 DK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENR---VLHRDLKPQNLLINKRGELKLADFGLARAFGIPVN- 155 (284)
T ss_pred Cc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcc-
Confidence 74 88888766544456899999999999999999999987 99999999999999999999999999976543211
Q ss_pred CCCccccCCCCCCCCCCCcccccc-CCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHH---Hhhc------C------c
Q 003703 611 LPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRR---AVSC------G------K 674 (801)
Q Consensus 611 ~~~~~~~~~~~Gt~~Y~APE~~~~-~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~---~~~~------g------~ 674 (801)
......+|+.|++||++.+ ..++.++|||||||++|+|++|++||........ .... . .
T Consensus 156 -----~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (284)
T cd07836 156 -----TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQ 230 (284)
T ss_pred -----ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhc
Confidence 1234467899999998765 4578999999999999999999999964332111 0000 0 0
Q ss_pred cccccC-------CCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 675 LSSILD-------PLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 675 ~~~~~d-------~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
...... .....+....+..+.+++.+|++.||.+||++.+.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l 279 (284)
T cd07836 231 LPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDAL 279 (284)
T ss_pred CchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHh
Confidence 000000 000111123456788999999999999999988433
No 287
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=8.1e-34 Score=299.74 Aligned_cols=249 Identities=28% Similarity=0.382 Sum_probs=196.2
Q ss_pred CccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcc--cHHHHHHHHHHHhcCCCCceeeEecccc--CCcceeeec
Q 003703 456 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ--GQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEY 529 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~--~~~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~LV~E~ 529 (801)
+|...+.||+|+||.||+|... +..||+|.+...... ....+.+|+.++..++|+||+++++++. +..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 3667789999999999999874 789999998766543 4557899999999999999999999874 357899999
Q ss_pred CCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCC
Q 003703 530 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTL 609 (801)
Q Consensus 530 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~ 609 (801)
+++++|.+++... ..+++..+..|+.+++.||.|||+.+ |+|+||+|+||+++.++.+||+|||++........
T Consensus 81 ~~~~~L~~~~~~~---~~~~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~ 154 (264)
T cd06626 81 CSGGTLEELLEHG---RILDEHVIRVYTLQLLEGLAYLHSHG---IVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTT 154 (264)
T ss_pred CCCCcHHHHHhhc---CCCChHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEcccccccccCCCCC
Confidence 9999999998654 34788999999999999999999988 99999999999999999999999999987754332
Q ss_pred cCCCccccCCCCCCCCCCCccccccCC---CCcchhHHhHHHHHHHHHhCCCCCCChhHHHH-HhhcCccccccCCCCCC
Q 003703 610 YLPSFHRSTAPKGSFPYADPEYHRTGV---LTPKSDSYSFGLIILQLLTGRLPVGLAGEVRR-AVSCGKLSSILDPLAGD 685 (801)
Q Consensus 610 ~~~~~~~~~~~~Gt~~Y~APE~~~~~~---~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~-~~~~g~~~~~~d~~~~~ 685 (801)
... .......|++.|+|||++.... ++.++||||||+++|+|++|+.||........ ...... ...+....
T Consensus 155 ~~~--~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~---~~~~~~~~ 229 (264)
T cd06626 155 TMG--EEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGA---GHKPPIPD 229 (264)
T ss_pred ccc--ccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhc---CCCCCCCc
Confidence 110 0022456889999999988766 88999999999999999999999964422111 111111 00111111
Q ss_pred CCHHHHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 686 WPTFVARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 686 ~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
+ ...+..+.+++.+||+.+|.+||++.+.+
T Consensus 230 ~-~~~~~~~~~li~~~l~~~p~~R~~~~~i~ 259 (264)
T cd06626 230 S-LQLSPEGKDFLDRCLESDPKKRPTASELL 259 (264)
T ss_pred c-cccCHHHHHHHHHHccCCcccCCCHHHHh
Confidence 1 12366788999999999999999998543
No 288
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=2.9e-34 Score=303.52 Aligned_cols=243 Identities=28% Similarity=0.398 Sum_probs=196.0
Q ss_pred CccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEeccccC--CcceeeecC
Q 003703 456 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYL 530 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~-~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E~~ 530 (801)
+|...+.||.|+||.||++.+. +..||+|.+..... .....+.+|+.++++++||||++++++|.. ..++++||+
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYM 81 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEec
Confidence 5666778999999999999886 88999999876543 344568899999999999999999998843 578999999
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCC
Q 003703 531 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHS-SKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTL 609 (801)
Q Consensus 531 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~-~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~ 609 (801)
++++|.+++.... ..++......++.+++.||.|||+ .+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 82 ~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~~---i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~- 155 (265)
T cd06605 82 DGGSLDKILKEVQ--GRIPERILGKIAVAVLKGLTYLHEKHK---IIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSL- 155 (265)
T ss_pred CCCcHHHHHHHcc--CCCCHHHHHHHHHHHHHHHHHHcCCCC---eecCCCCHHHEEECCCCCEEEeecccchhhHHHH-
Confidence 9999999887653 468889999999999999999999 76 9999999999999999999999999987654321
Q ss_pred cCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChh----HHHHHhhcCccccccCCCCCC
Q 003703 610 YLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAG----EVRRAVSCGKLSSILDPLAGD 685 (801)
Q Consensus 610 ~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~----~~~~~~~~g~~~~~~d~~~~~ 685 (801)
.....|+..|+|||++.+..++.++||||||+++|+|++|+.||.... ....... .+.......
T Consensus 156 -------~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~ 223 (265)
T cd06605 156 -------AKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQ-----YIVNEPPPR 223 (265)
T ss_pred -------hhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHH-----HHhcCCCCC
Confidence 112668899999999998999999999999999999999999996442 1111111 011111111
Q ss_pred CCHH-HHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 686 WPTF-VARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 686 ~~~~-~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
.+.. .+..+.+++.+||..+|.+||++.+.+
T Consensus 224 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll 255 (265)
T cd06605 224 LPSGKFSPDFQDFVNLCLIKDPRERPSYKELL 255 (265)
T ss_pred CChhhcCHHHHHHHHHHcCCCchhCcCHHHHh
Confidence 2222 566799999999999999999998543
No 289
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=9.4e-34 Score=300.79 Aligned_cols=248 Identities=24% Similarity=0.400 Sum_probs=193.9
Q ss_pred CccccceeeecCceEEEEEEEC---CeEEEEEEeccCCc----------ccHHHHHHHHHHHhc-CCCCceeeEeccccC
Q 003703 456 NFSESFKVGQGGFGCVYKGEML---GRTVAIKMLYSHNM----------QGQLEFQQEVRVLSK-LQHPHLVTLLGACPE 521 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~---g~~vAiK~l~~~~~----------~~~~~f~~E~~il~~-l~HpnIV~l~g~~~~ 521 (801)
+|.....||+|+||.||+|.+. +..+|+|.+..... .....+.+|+.++.+ ++||||++++++|.+
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 4667788999999999999885 57899998854321 122347788888875 799999999998844
Q ss_pred --CcceeeecCCCCchhhhhhhc-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecc
Q 003703 522 --AWSLVYEYLPNGSLQDRLFRK-SNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDF 598 (801)
Q Consensus 522 --~~~LV~E~~~~gsL~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DF 598 (801)
..++||||+++++|.+++... .....+++..++.++.|++.||.|||+.+ +++|+||+|+|||++.++.+||+||
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--~i~H~dl~~~nil~~~~~~~~l~df 158 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEK--RIVHRDLTPNNIMLGEDDKVTITDF 158 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCC--ceeecCCCHHHEEECCCCcEEEecc
Confidence 578999999999999987542 22356889999999999999999999633 3999999999999999999999999
Q ss_pred cceeeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHH--HHHhhcCccc
Q 003703 599 GICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEV--RRAVSCGKLS 676 (801)
Q Consensus 599 Gla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~--~~~~~~g~~~ 676 (801)
|++....... ......|+..|++||++.+..++.++||||||+++|+|++|++||...... ...+..+...
T Consensus 159 g~~~~~~~~~-------~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 231 (269)
T cd08528 159 GLAKQKQPES-------KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYE 231 (269)
T ss_pred cceeeccccc-------ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCC
Confidence 9998765432 123456899999999999888999999999999999999999999654332 1222222211
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHH
Q 003703 677 SILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKEL 720 (801)
Q Consensus 677 ~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L 720 (801)
+... ...+..+.+++.+||+.||.+||++. ++...+
T Consensus 232 ----~~~~---~~~~~~l~~li~~cl~~~p~~Rp~~~-e~~~~~ 267 (269)
T cd08528 232 ----PLPE---GMYSEDVTDVITSCLTPDAEARPDII-QVSAMI 267 (269)
T ss_pred ----cCCc---ccCCHHHHHHHHHHCCCCCccCCCHH-HHHHHh
Confidence 1111 12346789999999999999999998 555544
No 290
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-35 Score=320.84 Aligned_cols=246 Identities=22% Similarity=0.325 Sum_probs=201.9
Q ss_pred ccceeeecCceEEEEEEEC--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccc--cCCcceeeecCCCCc
Q 003703 459 ESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGAC--PEAWSLVYEYLPNGS 534 (801)
Q Consensus 459 ~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~--~~~~~LV~E~~~~gs 534 (801)
+...||-|+||.||++... +-..|-|++.........+|.-|++||+.+.||+||+|++.| ...+.++.|||.||-
T Consensus 36 IiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~GGA 115 (1187)
T KOG0579|consen 36 IIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGGGA 115 (1187)
T ss_pred HHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCCch
Confidence 3445999999999999876 445678888776666677899999999999999999999865 556788999999999
Q ss_pred hhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCCCc
Q 003703 535 LQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSF 614 (801)
Q Consensus 535 L~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~~~ 614 (801)
+..++..-+ .+|+...+.-++++++.||.|||+.+ |||||||..|||++-+|.++|+|||.+-.... ..
T Consensus 116 VDaimlEL~--r~LtE~QIqvvc~q~ldALn~LHs~~---iIHRDLKAGNiL~TldGdirLADFGVSAKn~~------t~ 184 (1187)
T KOG0579|consen 116 VDAIMLELG--RVLTEDQIQVVCYQVLDALNWLHSQN---IIHRDLKAGNILLTLDGDIRLADFGVSAKNKS------TR 184 (1187)
T ss_pred HhHHHHHhc--cccchHHHHHHHHHHHHHHHHHhhcc---hhhhhccccceEEEecCcEeeecccccccchh------HH
Confidence 998887655 47888999999999999999999988 99999999999999999999999998754332 22
Q ss_pred cccCCCCCCCCCCCcccc-----ccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhhcCccccccCCCCCCCCHH
Q 003703 615 HRSTAPKGSFPYADPEYH-----RTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTF 689 (801)
Q Consensus 615 ~~~~~~~Gt~~Y~APE~~-----~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~g~~~~~~d~~~~~~~~~ 689 (801)
.....+.|||.|||||+. ...+|+.++||||||+.|.||..+.+|....+.++-.+...+- +|.-.-.|..
T Consensus 185 qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKS----ePPTLlqPS~ 260 (1187)
T KOG0579|consen 185 QKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS----EPPTLLQPSH 260 (1187)
T ss_pred hhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhc----CCCcccCcch
Confidence 345678899999999975 4678999999999999999999999998877766655543321 1111123455
Q ss_pred HHHHHHHHHHHhhhhCCCCCCCchHHHHHH
Q 003703 690 VARRLVDLGLQCCELYGRERPDITPSLVKE 719 (801)
Q Consensus 690 ~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~ 719 (801)
.+..|.+++.+||..||..||+..+.+.+.
T Consensus 261 Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hp 290 (1187)
T KOG0579|consen 261 WSRSFSDFLKRCLVKNPRNRPPAAQLLKHP 290 (1187)
T ss_pred hhhHHHHHHHHHHhcCCccCCCHHHHhhCc
Confidence 677889999999999999999999766443
No 291
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=7.3e-35 Score=322.21 Aligned_cols=241 Identities=23% Similarity=0.373 Sum_probs=198.3
Q ss_pred ceeeecCceEEEEEEEC--CeEEEEEEeccC----CcccHHHHHHHHHHHhcCCCCceeeEeccccC----CcceeeecC
Q 003703 461 FKVGQGGFGCVYKGEML--GRTVAIKMLYSH----NMQGQLEFQQEVRVLSKLQHPHLVTLLGACPE----AWSLVYEYL 530 (801)
Q Consensus 461 ~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~----~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~----~~~LV~E~~ 530 (801)
..||+|+|-+||+|.+. |-.||.--++.. .......|..|+.+|..|+|||||++|.++.+ ...+|.|.|
T Consensus 46 evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL~ 125 (632)
T KOG0584|consen 46 EVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITELF 125 (632)
T ss_pred hhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeecc
Confidence 36999999999999875 777775443322 22333579999999999999999999998843 256899999
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCC-CCeeeecccceeeccCCCC
Q 003703 531 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSE-LSSKICDFGICRLVTEDTL 609 (801)
Q Consensus 531 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~-~~vKL~DFGla~~~~~~~~ 609 (801)
..|+|..++.+.. .++......|+.||+.||.|||++.| ||||||||.+||+|+.+ |.|||+|+|||.......
T Consensus 126 TSGtLr~Y~kk~~---~vn~kaik~W~RQILkGL~yLHs~~P-PIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~- 200 (632)
T KOG0584|consen 126 TSGTLREYRKKHR---RVNIKAIKSWCRQILKGLVYLHSQDP-PIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSH- 200 (632)
T ss_pred cCCcHHHHHHHhc---cCCHHHHHHHHHHHHHHhhhhhcCCC-CccccccccceEEEcCCcCceeecchhHHHHhhccc-
Confidence 9999999998765 46678999999999999999999995 89999999999999865 899999999999876432
Q ss_pred cCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCC---ChhHHHHHhhcCccccccCCCCCCC
Q 003703 610 YLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVG---LAGEVRRAVSCGKLSSILDPLAGDW 686 (801)
Q Consensus 610 ~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~---~~~~~~~~~~~g~~~~~~d~~~~~~ 686 (801)
.....|||.|||||++- ..|+..+||||||++|+||+|+..||. ....++..+..|....-+...
T Consensus 201 -------aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV---- 268 (632)
T KOG0584|consen 201 -------AKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALSKV---- 268 (632)
T ss_pred -------cceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhhcc----
Confidence 34578999999999886 789999999999999999999999996 455677777777654433321
Q ss_pred CHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHH
Q 003703 687 PTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQ 722 (801)
Q Consensus 687 ~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~ 722 (801)
-..++.++|.+|+.. ..+||+..+.|.+.+-.
T Consensus 269 ---~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~ 300 (632)
T KOG0584|consen 269 ---KDPEVREFIEKCLAT-KSERLSAKELLKDPFFD 300 (632)
T ss_pred ---CCHHHHHHHHHHhcC-chhccCHHHHhhChhhc
Confidence 134788999999999 99999999877766643
No 292
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=1.5e-33 Score=305.92 Aligned_cols=242 Identities=27% Similarity=0.351 Sum_probs=190.4
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcc---cHHHHHHHHHHHhcCCCCceeeEecccc--CCcceee
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ---GQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVY 527 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~---~~~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~LV~ 527 (801)
..|...+.||+|+||.||+|... |..||+|.+...... ....+.+|+.++..++||||++++++|. +..++||
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 45777788999999999999874 889999998654332 2346889999999999999999999984 4578999
Q ss_pred ecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCC
Q 003703 528 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 607 (801)
Q Consensus 528 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~ 607 (801)
||++ |+|.+.+.... ..+++..+..++.|++.||.|||+.+ |+|+||+|+||+++.++.+||+|||++......
T Consensus 95 e~~~-g~l~~~~~~~~--~~l~~~~~~~~~~ql~~~L~~LH~~~---i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~ 168 (307)
T cd06607 95 EYCL-GSASDILEVHK--KPLQEVEIAAICHGALQGLAYLHSHE---RIHRDIKAGNILLTEPGTVKLADFGSASLVSPA 168 (307)
T ss_pred HhhC-CCHHHHHHHcc--cCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEECCCCCEEEeecCcceecCCC
Confidence 9996 57777665433 35899999999999999999999987 999999999999999999999999998765322
Q ss_pred CCcCCCccccCCCCCCCCCCCccccc---cCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhhcCccccccCCCCC
Q 003703 608 TLYLPSFHRSTAPKGSFPYADPEYHR---TGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAG 684 (801)
Q Consensus 608 ~~~~~~~~~~~~~~Gt~~Y~APE~~~---~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~g~~~~~~d~~~~ 684 (801)
....|++.|+|||++. .+.++.++||||||+++|||+||++||...+..........- . .+.
T Consensus 169 ----------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~-~--~~~-- 233 (307)
T cd06607 169 ----------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN-D--SPT-- 233 (307)
T ss_pred ----------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcC-C--CCC--
Confidence 2346888999999874 456889999999999999999999999754432221111000 0 000
Q ss_pred CCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHH
Q 003703 685 DWPTFVARRLVDLGLQCCELYGRERPDITPSLV 717 (801)
Q Consensus 685 ~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~ 717 (801)
-.+...+..+.+++.+||+.+|.+||++.+.+.
T Consensus 234 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 266 (307)
T cd06607 234 LSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLK 266 (307)
T ss_pred CCchhhCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 012234567999999999999999999985443
No 293
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=5.4e-34 Score=304.96 Aligned_cols=250 Identities=25% Similarity=0.358 Sum_probs=193.9
Q ss_pred CccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccceeeec
Q 003703 456 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEY 529 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~--~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E~ 529 (801)
+|...+.||.|+||.||+|.+. |..||+|++..... .....+.+|+.++++++||||+++++++.. ..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 4667788999999999999874 88999999876543 224568899999999999999999998843 47899999
Q ss_pred CCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCC
Q 003703 530 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTL 609 (801)
Q Consensus 530 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~ 609 (801)
+ +++|.+++.... .++++..+..++.||+.||.|||+.+ |+|+||||+||+++.++.++|+|||++........
T Consensus 81 ~-~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~ 154 (286)
T cd07832 81 M-PSDLSEVLRDEE--RPLPEAQVKSYMRMLLKGVAYMHANG---IMHRDLKPANLLISADGVLKIADFGLARLFSEEEP 154 (286)
T ss_pred c-CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC
Confidence 9 999999886544 46899999999999999999999987 99999999999999999999999999987654321
Q ss_pred cCCCccccCCCCCCCCCCCccccccC-CCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHH---hh-cCc----------
Q 003703 610 YLPSFHRSTAPKGSFPYADPEYHRTG-VLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRA---VS-CGK---------- 674 (801)
Q Consensus 610 ~~~~~~~~~~~~Gt~~Y~APE~~~~~-~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~---~~-~g~---------- 674 (801)
.......|+..|+|||++.+. .++.++|||||||++|||+||.+||......... +. .+.
T Consensus 155 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (286)
T cd07832 155 -----RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLT 229 (286)
T ss_pred -----CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhcc
Confidence 112345689999999988654 4689999999999999999998888643321110 00 000
Q ss_pred ----cccccCCCC-----CCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 675 ----LSSILDPLA-----GDWPTFVARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 675 ----~~~~~d~~~-----~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
...+..+.. ..........+.+|+.+|++.+|.+||++.+.+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l 280 (286)
T cd07832 230 SLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEAL 280 (286)
T ss_pred CcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHh
Confidence 000000000 011113457899999999999999999998544
No 294
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-35 Score=301.38 Aligned_cols=238 Identities=26% Similarity=0.309 Sum_probs=199.4
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcccHH---HHHHHHHHHhcCCCCceeeEecccc--CCcceee
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQL---EFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVY 527 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~~~---~f~~E~~il~~l~HpnIV~l~g~~~--~~~~LV~ 527 (801)
++|...++||+|.||.|.+++-. |+.+|||++++...-... .-..|-++|...+||.+..|-..|+ +.+|+||
T Consensus 168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVM 247 (516)
T KOG0690|consen 168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVM 247 (516)
T ss_pred chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEE
Confidence 67888899999999999999775 899999999887654443 3567889999999999999988874 5689999
Q ss_pred ecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCC
Q 003703 528 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 607 (801)
Q Consensus 528 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~ 607 (801)
||..||.|.-+|.+.. .++......+...|+.||.|||+.+ ||.||||.+|+|||.+|++||+|||+|+.--..
T Consensus 248 eyanGGeLf~HLsrer---~FsE~RtRFYGaEIvsAL~YLHs~~---ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~ 321 (516)
T KOG0690|consen 248 EYANGGELFFHLSRER---VFSEDRTRFYGAEIVSALGYLHSRN---IVYRDLKLENLLLDKDGHIKITDFGLCKEEIKY 321 (516)
T ss_pred EEccCceEeeehhhhh---cccchhhhhhhHHHHHHhhhhhhCC---eeeeechhhhheeccCCceEeeecccchhcccc
Confidence 9999999999997764 4566666777899999999999987 999999999999999999999999999864332
Q ss_pred CCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhH--HHHHhhcCccccccCCCCCC
Q 003703 608 TLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILDPLAGD 685 (801)
Q Consensus 608 ~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~--~~~~~~~g~~~~~~d~~~~~ 685 (801)
. ..+...+|||.|+|||++....|+..+|+|.+||+||||++|+.||...+. ...++..+ ...
T Consensus 322 g------~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~e---------d~k 386 (516)
T KOG0690|consen 322 G------DTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILME---------DLK 386 (516)
T ss_pred c------ceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhh---------hcc
Confidence 2 235778999999999999999999999999999999999999999975443 22333222 225
Q ss_pred CCHHHHHHHHHHHHHhhhhCCCCCCCch
Q 003703 686 WPTFVARRLVDLGLQCCELYGRERPDIT 713 (801)
Q Consensus 686 ~~~~~~~~l~~Li~~Cl~~dP~~RPt~~ 713 (801)
+|...+.+...|+...|..||++|---.
T Consensus 387 FPr~ls~eAktLLsGLL~kdP~kRLGgG 414 (516)
T KOG0690|consen 387 FPRTLSPEAKTLLSGLLKKDPKKRLGGG 414 (516)
T ss_pred CCccCCHHHHHHHHHHhhcChHhhcCCC
Confidence 6777788889999999999999996443
No 295
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=1.1e-33 Score=303.26 Aligned_cols=247 Identities=24% Similarity=0.378 Sum_probs=200.4
Q ss_pred HHhcCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEecccc--CCcceee
Q 003703 452 TATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVY 527 (801)
Q Consensus 452 ~at~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~LV~ 527 (801)
..+++|.....||.|+||.||+|.+. +..|++|++..... ....+.+|+.++..++|+||++++++|. ...++|+
T Consensus 16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 94 (286)
T cd06614 16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVM 94 (286)
T ss_pred CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEE
Confidence 34566777788999999999999986 88999999976544 4567889999999999999999999874 4578999
Q ss_pred ecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCC
Q 003703 528 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 607 (801)
Q Consensus 528 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~ 607 (801)
||+++++|.+++.... ..+++..+..++.+++.||.|||+.+ |+|+||+|+||+++.++.++|+|||++......
T Consensus 95 e~~~~~~L~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~lH~~g---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 169 (286)
T cd06614 95 EYMDGGSLTDIITQNF--VRMNEPQIAYVCREVLQGLEYLHSQN---VIHRDIKSDNILLSKDGSVKLADFGFAAQLTKE 169 (286)
T ss_pred eccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCChhhEEEcCCCCEEECccchhhhhccc
Confidence 9999999999997654 46899999999999999999999977 999999999999999999999999998765432
Q ss_pred CCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHh--hcCccccccCCCCCC
Q 003703 608 TLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAV--SCGKLSSILDPLAGD 685 (801)
Q Consensus 608 ~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~--~~g~~~~~~d~~~~~ 685 (801)
.. ......|++.|++||++.+..++.++|||||||++|+|++|+.||.......... ..+..... .
T Consensus 170 ~~------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~------~ 237 (286)
T cd06614 170 KS------KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIPPL------K 237 (286)
T ss_pred hh------hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCC------c
Confidence 21 1233458899999999988889999999999999999999999997544332221 11111111 1
Q ss_pred CCHHHHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 686 WPTFVARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 686 ~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
.+...+..+.+++.+|++.+|..||++.+.+
T Consensus 238 ~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il 268 (286)
T cd06614 238 NPEKWSPEFKDFLNKCLVKDPEKRPSAEELL 268 (286)
T ss_pred chhhCCHHHHHHHHHHhccChhhCcCHHHHh
Confidence 1122456789999999999999999998544
No 296
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=1.1e-33 Score=303.99 Aligned_cols=249 Identities=22% Similarity=0.327 Sum_probs=188.8
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcc-cHHHHHHHHHHHhcCCCCceeeEeccccC--Ccceeeec
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ-GQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEY 529 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~-~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E~ 529 (801)
++|.....||.|+||.||+|... ++.||||.+...... ....+.+|+.++++++||||+++++++.+ ..++||||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY 84 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence 46788889999999999999875 789999998654322 23457789999999999999999999854 47899999
Q ss_pred CCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCC
Q 003703 530 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTL 609 (801)
Q Consensus 530 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~ 609 (801)
++ ++|.+++.... ..+++.....++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 85 ~~-~~L~~~~~~~~--~~~~~~~~~~~~~ql~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~ 158 (291)
T cd07844 85 LD-TDLKQYMDDCG--GGLSMHNVRLFLFQLLRGLAYCHQRR---VLHRDLKPQNLLISERGELKLADFGLARAKSVPSK 158 (291)
T ss_pred CC-CCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhCC---eecccCCHHHEEEcCCCCEEECccccccccCCCCc
Confidence 97 48998886543 36889999999999999999999987 99999999999999999999999999875432111
Q ss_pred cCCCccccCCCCCCCCCCCcccccc-CCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHH----hh---c---Cccccc
Q 003703 610 YLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRA----VS---C---GKLSSI 678 (801)
Q Consensus 610 ~~~~~~~~~~~~Gt~~Y~APE~~~~-~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~----~~---~---g~~~~~ 678 (801)
......+++.|+|||++.+ ..++.++|||||||++|+|++|+.||......... +. . ..+..+
T Consensus 159 ------~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (291)
T cd07844 159 ------TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGV 232 (291)
T ss_pred ------cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhh
Confidence 1123357889999998865 56899999999999999999999999643311111 00 0 000000
Q ss_pred cC-------------CC-CCCCCHHH--HHHHHHHHHHhhhhCCCCCCCchHH
Q 003703 679 LD-------------PL-AGDWPTFV--ARRLVDLGLQCCELYGRERPDITPS 715 (801)
Q Consensus 679 ~d-------------~~-~~~~~~~~--~~~l~~Li~~Cl~~dP~~RPt~~e~ 715 (801)
.. +. ........ ...+.+++.+||+.+|.+||++.+.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~ 285 (291)
T cd07844 233 SSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEA 285 (291)
T ss_pred hhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHH
Confidence 00 00 00000011 2577899999999999999999853
No 297
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=4.2e-34 Score=305.94 Aligned_cols=248 Identities=22% Similarity=0.265 Sum_probs=188.0
Q ss_pred CccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccceeeec
Q 003703 456 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEY 529 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~--~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E~ 529 (801)
+|...+.||.|+||.||+|+.. |..||+|++..... .....+.+|+.++.+++||||+++++++.+ ..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 3667788999999999999884 88999999865432 223457789999999999999999999844 57899999
Q ss_pred CCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCC
Q 003703 530 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTL 609 (801)
Q Consensus 530 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~ 609 (801)
++ ++|.+.+.... ..+++..+..++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++.......
T Consensus 81 ~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~ 154 (284)
T cd07839 81 CD-QDLKKYFDSCN--GDIDPEIVKSFMFQLLKGLAFCHSHN---VLHRDLKPQNLLINKNGELKLADFGLARAFGIPVR 154 (284)
T ss_pred CC-CCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEcCCCcEEECccchhhccCCCCC
Confidence 96 57877775433 45899999999999999999999987 99999999999999999999999999986543221
Q ss_pred cCCCccccCCCCCCCCCCCccccccC-CCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhhc-----C--------cc
Q 003703 610 YLPSFHRSTAPKGSFPYADPEYHRTG-VLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSC-----G--------KL 675 (801)
Q Consensus 610 ~~~~~~~~~~~~Gt~~Y~APE~~~~~-~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~-----g--------~~ 675 (801)
......+++.|+|||++.+. .++.++|||||||++|+|+||..||.........+.. + .+
T Consensus 155 ------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (284)
T cd07839 155 ------CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGV 228 (284)
T ss_pred ------CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHh
Confidence 12344678999999988664 4789999999999999999999886422211111000 0 00
Q ss_pred ccccCCC-CC---------CCCHHHHHHHHHHHHHhhhhCCCCCCCchHH
Q 003703 676 SSILDPL-AG---------DWPTFVARRLVDLGLQCCELYGRERPDITPS 715 (801)
Q Consensus 676 ~~~~d~~-~~---------~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~ 715 (801)
....+.. .. ......+..+.+|+.+||+.||.+|||+.+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~i 278 (284)
T cd07839 229 SKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEA 278 (284)
T ss_pred hhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHH
Confidence 0000100 00 1112245688999999999999999999843
No 298
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=5.5e-34 Score=299.77 Aligned_cols=243 Identities=27% Similarity=0.386 Sum_probs=195.1
Q ss_pred CccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccceeeec
Q 003703 456 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEY 529 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~--~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E~ 529 (801)
+|...+.||.|+||.||+|... |..||+|.+..... .....+.+|+.+++.++||||+++++.|.+ ..++|+||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 4677889999999999999885 78999999865432 234568899999999999999999998854 47899999
Q ss_pred CCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCC-eeeecccceeeccCCC
Q 003703 530 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELS-SKICDFGICRLVTEDT 608 (801)
Q Consensus 530 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~-vKL~DFGla~~~~~~~ 608 (801)
+++++|.+++..... ..+++..+..|+.+++.||.|||+.+ ++|+||||+||+++.++. +||+|||.+.......
T Consensus 81 ~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~ 156 (257)
T cd08225 81 CDGGDLMKRINRQRG-VLFSEDQILSWFVQISLGLKHIHDRK---ILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM 156 (257)
T ss_pred CCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEcCCCCeEEecccccchhccCCc
Confidence 999999998876432 35799999999999999999999987 999999999999998854 6999999998765332
Q ss_pred CcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHH--hhcCccccccCCCCCCC
Q 003703 609 LYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRA--VSCGKLSSILDPLAGDW 686 (801)
Q Consensus 609 ~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~--~~~g~~~~~~d~~~~~~ 686 (801)
. ......|++.|+|||++.+..++.++|||||||++|+|++|..||......... ...+.+ . ..
T Consensus 157 ~------~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~----~----~~ 222 (257)
T cd08225 157 E------LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYF----A----PI 222 (257)
T ss_pred c------cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcccC----C----CC
Confidence 1 122346899999999998888999999999999999999999999744322111 111111 1 11
Q ss_pred CHHHHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 687 PTFVARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 687 ~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
+...+..+.+++.+||..+|.+||++.+.+
T Consensus 223 ~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll 252 (257)
T cd08225 223 SPNFSRDLRSLISQLFKVSPRDRPSITSIL 252 (257)
T ss_pred CCCCCHHHHHHHHHHhccChhhCcCHHHHh
Confidence 223446789999999999999999998543
No 299
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=1.3e-33 Score=294.45 Aligned_cols=243 Identities=27% Similarity=0.429 Sum_probs=199.1
Q ss_pred CccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEecccc--CCcceeeecCC
Q 003703 456 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYLP 531 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~LV~E~~~ 531 (801)
+|...+.||.|+||.||++... +..|++|++..........+.+|+.++++++|||++++++++. ...++++||++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 80 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS 80 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence 3667788999999999999986 8899999997765555667999999999999999999999884 45789999999
Q ss_pred CCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcC
Q 003703 532 NGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYL 611 (801)
Q Consensus 532 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~ 611 (801)
+++|.+++.... ..+++..+..++.+++.||.|||..+ ++|+||+|+||+++.++.++|+|||++........
T Consensus 81 ~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-- 153 (253)
T cd05122 81 GGSLKDLLKSTN--QTLTESQIAYVCKELLKGLEYLHSNG---IIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA-- 153 (253)
T ss_pred CCcHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHhhcCC---EecCCCCHHHEEEccCCeEEEeecccccccccccc--
Confidence 999999886643 46899999999999999999999977 99999999999999999999999999987654321
Q ss_pred CCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHH--hhcCccccccCCCCCCCCHH
Q 003703 612 PSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRA--VSCGKLSSILDPLAGDWPTF 689 (801)
Q Consensus 612 ~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~--~~~g~~~~~~d~~~~~~~~~ 689 (801)
.....|+..|++||++....++.++||||||+++|+|++|+.||...+..... ......... ..+..
T Consensus 154 -----~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~------~~~~~ 222 (253)
T cd05122 154 -----RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNGPPGL------RNPEK 222 (253)
T ss_pred -----ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcCCCCc------Ccccc
Confidence 23456889999999998888999999999999999999999999754322221 111111111 11112
Q ss_pred HHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 690 VARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 690 ~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
.+..+.+++.+||+.||.+|||+.+.+
T Consensus 223 ~~~~~~~~i~~~l~~~p~~R~t~~~~l 249 (253)
T cd05122 223 WSDEFKDFLKKCLQKNPEKRPTAEQLL 249 (253)
T ss_pred cCHHHHHHHHHHccCChhhCCCHHHHh
Confidence 356799999999999999999998543
No 300
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=1.3e-33 Score=303.92 Aligned_cols=234 Identities=29% Similarity=0.391 Sum_probs=193.8
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccceee
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVY 527 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~---~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~ 527 (801)
++|.....||+|+||.||++... +..||+|++..... .....+.+|+.++.+++||||+++++++.+ ..++||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 36778889999999999999885 78999999865432 233458899999999999999999998844 478999
Q ss_pred ecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCC
Q 003703 528 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 607 (801)
Q Consensus 528 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~ 607 (801)
||+++++|.+++... ..+++..+..++.|++.||.|||+.+ |+|+||+|+|||++.++.+||+|||+++.....
T Consensus 81 e~~~~~~L~~~~~~~---~~l~~~~~~~~~~qil~~l~~lH~~~---i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~ 154 (290)
T cd05580 81 EYVPGGELFSHLRKS---GRFPEPVARFYAAQVVLALEYLHSLD---IVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR 154 (290)
T ss_pred ecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEeeCCCccccCCC
Confidence 999999999998765 35788999999999999999999987 999999999999999999999999998876433
Q ss_pred CCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHH--HHHhhcCccccccCCCCCC
Q 003703 608 TLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEV--RRAVSCGKLSSILDPLAGD 685 (801)
Q Consensus 608 ~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~--~~~~~~g~~~~~~d~~~~~ 685 (801)
.....|++.|+|||.+.+..++.++||||||+++|+|++|+.||...... ...+..+.. .
T Consensus 155 ---------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~---------~ 216 (290)
T cd05580 155 ---------TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKV---------R 216 (290)
T ss_pred ---------CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCc---------c
Confidence 23446899999999998888999999999999999999999999754422 222222221 2
Q ss_pred CCHHHHHHHHHHHHHhhhhCCCCCCCc
Q 003703 686 WPTFVARRLVDLGLQCCELYGRERPDI 712 (801)
Q Consensus 686 ~~~~~~~~l~~Li~~Cl~~dP~~RPt~ 712 (801)
.+...+..+.+++.+||..+|.+||+.
T Consensus 217 ~~~~~~~~l~~li~~~l~~~p~~R~~~ 243 (290)
T cd05580 217 FPSFFSPDAKDLIRNLLQVDLTKRLGN 243 (290)
T ss_pred CCccCCHHHHHHHHHHccCCHHHccCc
Confidence 233346788999999999999999943
No 301
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=8.7e-34 Score=303.32 Aligned_cols=249 Identities=23% Similarity=0.299 Sum_probs=190.2
Q ss_pred ccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEeccccC--CcceeeecC
Q 003703 457 FSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYL 530 (801)
Q Consensus 457 f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~--~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E~~ 530 (801)
|...+.||.|++|.||+|... |..||+|++..... .....+.+|+.+++.++|||++++++++.+ ..+++|||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 456678999999999999874 89999999875432 223468899999999999999999999854 478999999
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCc
Q 003703 531 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLY 610 (801)
Q Consensus 531 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~ 610 (801)
+ ++|.+++..... ..+++..++.++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||++........
T Consensus 81 ~-~~l~~~~~~~~~-~~~~~~~~~~~~~~i~~~L~~lH~~~---~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~- 154 (283)
T cd07835 81 D-LDLKKYMDSSPL-TGLDPPLIKSYLYQLLQGIAYCHSHR---VLHRDLKPQNLLIDREGALKLADFGLARAFGVPVR- 154 (283)
T ss_pred C-cCHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCcEEEeecccccccCCCcc-
Confidence 4 689988865432 46899999999999999999999987 99999999999999999999999999976532211
Q ss_pred CCCccccCCCCCCCCCCCccccccC-CCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhh---c-Cc-----------
Q 003703 611 LPSFHRSTAPKGSFPYADPEYHRTG-VLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVS---C-GK----------- 674 (801)
Q Consensus 611 ~~~~~~~~~~~Gt~~Y~APE~~~~~-~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~---~-g~----------- 674 (801)
......+++.|+|||++.+. .++.++|||||||++|+|+||++||........... . +.
T Consensus 155 -----~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (283)
T cd07835 155 -----TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTS 229 (283)
T ss_pred -----ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhh
Confidence 12334578999999987654 578999999999999999999999964433211111 0 00
Q ss_pred -------cccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 675 -------LSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 675 -------~~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
+.....+.........+..+.+++.+|++.+|.+||++.+.+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il 278 (283)
T cd07835 230 LPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAAL 278 (283)
T ss_pred chhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHh
Confidence 000000011111223446789999999999999999998533
No 302
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=6e-34 Score=304.95 Aligned_cols=249 Identities=24% Similarity=0.313 Sum_probs=194.3
Q ss_pred CccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEecccc--CCcceeeec
Q 003703 456 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEY 529 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~--~~~~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~LV~E~ 529 (801)
+|...+.||+|+||.||+|.+. +..||+|+++.... .....+.+|+.++++++|+||++++++|. +..++||||
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 81 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEY 81 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEec
Confidence 6788889999999999999885 78999999865432 33456889999999999999999999984 347899999
Q ss_pred CCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCC
Q 003703 530 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTL 609 (801)
Q Consensus 530 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~ 609 (801)
++++.+..++... ..+++..+..++.+|+.||.|||..+ ++|+||+|+||+++.++.+||+|||++........
T Consensus 82 ~~~~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~ 155 (288)
T cd07833 82 VERTLLELLEASP---GGLPPDAVRSYIWQLLQAIAYCHSHN---IIHRDIKPENILVSESGVLKLCDFGFARALRARPA 155 (288)
T ss_pred CCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEEeeecccccCCCcc
Confidence 9987776655332 34789999999999999999999987 99999999999999999999999999987654321
Q ss_pred cCCCccccCCCCCCCCCCCccccccC-CCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhhc----Cc----------
Q 003703 610 YLPSFHRSTAPKGSFPYADPEYHRTG-VLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSC----GK---------- 674 (801)
Q Consensus 610 ~~~~~~~~~~~~Gt~~Y~APE~~~~~-~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~----g~---------- 674 (801)
.......|+..|+|||++.+. .++.++||||||+++|+|++|++||............ +.
T Consensus 156 -----~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (288)
T cd07833 156 -----SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFS 230 (288)
T ss_pred -----ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcc
Confidence 122345688999999999888 8899999999999999999999999643322111110 00
Q ss_pred ---------cccccCCC--CCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHH
Q 003703 675 ---------LSSILDPL--AGDWPTFVARRLVDLGLQCCELYGRERPDITPS 715 (801)
Q Consensus 675 ---------~~~~~d~~--~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~ 715 (801)
+....++. ...++...+..+.+|+.+||..+|.+||++.+.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~i 282 (288)
T cd07833 231 SNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDEL 282 (288)
T ss_pred cCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHH
Confidence 00000000 001233346789999999999999999999843
No 303
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=5e-34 Score=306.18 Aligned_cols=248 Identities=25% Similarity=0.338 Sum_probs=188.8
Q ss_pred CccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCC-CCceeeEecccc--CCcceeeec
Q 003703 456 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQ-HPHLVTLLGACP--EAWSLVYEY 529 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~-~~~~~f~~E~~il~~l~-HpnIV~l~g~~~--~~~~LV~E~ 529 (801)
+|.....||+|+||.||++... |..||+|.+..... .....+.+|+.++.++. ||||+++++++. ...+++|||
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~ 84 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL 84 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence 3444567999999999999885 78999999875433 34456889999999996 999999999874 356789999
Q ss_pred CCCCchhhhh---hhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccC
Q 003703 530 LPNGSLQDRL---FRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTE 606 (801)
Q Consensus 530 ~~~gsL~~~L---~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~ 606 (801)
+. ++|.++. ... ....+++..+..++.+++.||.|||+.. +|+||||||+|||++.++.+||+|||+++....
T Consensus 85 ~~-~~l~~l~~~~~~~-~~~~l~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 160 (288)
T cd06616 85 MD-ISLDKFYKYVYEV-LKSVIPEEILGKIAVATVKALNYLKEEL--KIIHRDVKPSNILLDRNGNIKLCDFGISGQLVD 160 (288)
T ss_pred cc-CCHHHHHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHhhcC--CeeccCCCHHHEEEccCCcEEEeecchhHHhcc
Confidence 85 4555433 222 2256899999999999999999999752 299999999999999999999999999976543
Q ss_pred CCCcCCCccccCCCCCCCCCCCccccccC---CCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhhc---CccccccC
Q 003703 607 DTLYLPSFHRSTAPKGSFPYADPEYHRTG---VLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSC---GKLSSILD 680 (801)
Q Consensus 607 ~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~---~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~---g~~~~~~d 680 (801)
.. ......||+.|+|||++.+. .++.++|||||||++|+|++|+.||.........+.. +....+
T Consensus 161 ~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~-- 231 (288)
T cd06616 161 SI-------AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPIL-- 231 (288)
T ss_pred CC-------ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCCCCcC--
Confidence 22 12334689999999998766 6899999999999999999999999754332222211 111111
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHH
Q 003703 681 PLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVK 718 (801)
Q Consensus 681 ~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~ 718 (801)
....+...+..+.+|+.+||+.+|.+||++.+.+.+
T Consensus 232 --~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 232 --SNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred --CCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111122356789999999999999999999855443
No 304
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.1e-34 Score=314.10 Aligned_cols=242 Identities=29% Similarity=0.489 Sum_probs=203.5
Q ss_pred cceeeecCceEEEEEEEC---C--eEEEEEEeccCCcc-cHHHHHHHHHHHhcCCCCceeeEeccccC-CcceeeecCCC
Q 003703 460 SFKVGQGGFGCVYKGEML---G--RTVAIKMLYSHNMQ-GQLEFQQEVRVLSKLQHPHLVTLLGACPE-AWSLVYEYLPN 532 (801)
Q Consensus 460 ~~~LG~G~fG~Vy~g~~~---g--~~vAiK~l~~~~~~-~~~~f~~E~~il~~l~HpnIV~l~g~~~~-~~~LV~E~~~~ 532 (801)
.++||+|.||.|++|.|+ | -.||||.+..+... ....|.+|+.+|.+|+|||+|+|||...+ ...||||+++.
T Consensus 115 ~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~qp~mMV~ELapl 194 (1039)
T KOG0199|consen 115 YELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLDQPAMMVFELAPL 194 (1039)
T ss_pred HHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeeccchhhHHhhhccc
Confidence 346999999999999986 4 35899999887665 45679999999999999999999999865 46799999999
Q ss_pred CchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCC
Q 003703 533 GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLP 612 (801)
Q Consensus 533 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~ 612 (801)
|||.++|.+ .....|.......++.|||.|+.||.+.+ +|||||-..||||-..-.|||+||||.+.+..+...
T Consensus 195 GSLldrLrk-a~~~~llv~~Lcdya~QiA~aM~YLeskr---lvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~-- 268 (1039)
T KOG0199|consen 195 GSLLDRLRK-AKKAILLVSRLCDYAMQIAKAMQYLESKR---LVHRDLAARNLLLASPRTVKICDFGLMRALGENEDM-- 268 (1039)
T ss_pred chHHHHHhh-ccccceeHHHHHHHHHHHHHHHHHHhhhh---hhhhhhhhhhheecccceeeeecccceeccCCCCcc--
Confidence 999999988 34466888888999999999999999987 999999999999999999999999999988765532
Q ss_pred CccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChhH--HHHHhhcCccccccCCCCCCCCHH
Q 003703 613 SFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWPTF 689 (801)
Q Consensus 613 ~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~~--~~~~~~~g~~~~~~d~~~~~~~~~ 689 (801)
|.......-.+.|.|||.+....++.++|||+|||+||||+| |..||..... +...+..|. .-..|..
T Consensus 269 -Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~~e--------rLpRPk~ 339 (1039)
T KOG0199|consen 269 -YVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDAGE--------RLPRPKY 339 (1039)
T ss_pred -eEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhccccc--------cCCCCCC
Confidence 223344556788999999999999999999999999999999 7899975443 333333332 2244666
Q ss_pred HHHHHHHHHHHhhhhCCCCCCCchHHHH
Q 003703 690 VARRLVDLGLQCCELYGRERPDITPSLV 717 (801)
Q Consensus 690 ~~~~l~~Li~~Cl~~dP~~RPt~~e~l~ 717 (801)
+++.+++++..||..+|.+||++. .+.
T Consensus 340 csedIY~imk~cWah~paDRptFs-air 366 (1039)
T KOG0199|consen 340 CSEDIYQIMKNCWAHNPADRPTFS-AIR 366 (1039)
T ss_pred ChHHHHHHHHHhccCCccccccHH-HHH
Confidence 889999999999999999999999 444
No 305
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.4e-33 Score=352.44 Aligned_cols=249 Identities=30% Similarity=0.457 Sum_probs=199.1
Q ss_pred hcCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccceeeec
Q 003703 454 TCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEY 529 (801)
Q Consensus 454 t~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E~ 529 (801)
...|.....||+|+||.||+|... |..||||++...... ...|+.++.+++|||||+++|+|.+ ..++||||
T Consensus 689 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey 764 (968)
T PLN00113 689 LSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEY 764 (968)
T ss_pred HhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeC
Confidence 345777889999999999999874 889999998644322 2346889999999999999999943 57899999
Q ss_pred CCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCC
Q 003703 530 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTL 609 (801)
Q Consensus 530 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~ 609 (801)
+++|+|.+++. .++|..+.+|+.||+.||.|||..+.++|+||||||+||+++.++.+++. ||.......
T Consensus 765 ~~~g~L~~~l~------~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~--- 834 (968)
T PLN00113 765 IEGKNLSEVLR------NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT--- 834 (968)
T ss_pred CCCCcHHHHHh------cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccccc---
Confidence 99999999984 38899999999999999999997655679999999999999999888876 665543321
Q ss_pred cCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCC--------hhHHHHHhhcCccccccCC
Q 003703 610 YLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGL--------AGEVRRAVSCGKLSSILDP 681 (801)
Q Consensus 610 ~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~--------~~~~~~~~~~g~~~~~~d~ 681 (801)
.....||+.|+|||++.+..++.++|||||||++|||+||+.||.. ..+++..........++|+
T Consensus 835 -------~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (968)
T PLN00113 835 -------DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDP 907 (968)
T ss_pred -------CCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCc
Confidence 1233689999999999999999999999999999999999999852 1223222333344455565
Q ss_pred CCC---CCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHHhh
Q 003703 682 LAG---DWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLH 724 (801)
Q Consensus 682 ~~~---~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~l~ 724 (801)
... ..+......+.+++.+||+.+|.+||+|. ++++.|+.+.
T Consensus 908 ~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~-evl~~L~~~~ 952 (968)
T PLN00113 908 SIRGDVSVNQNEIVEVMNLALHCTATDPTARPCAN-DVLKTLESAS 952 (968)
T ss_pred cccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHH-HHHHHHHHhh
Confidence 432 23445667889999999999999999999 6778888653
No 306
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-34 Score=288.60 Aligned_cols=256 Identities=23% Similarity=0.343 Sum_probs=194.4
Q ss_pred eeeecCceEEEEEEEC--CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCC-CCceeeEecccc--CCcceeeecCCCCch
Q 003703 462 KVGQGGFGCVYKGEML--GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQ-HPHLVTLLGACP--EAWSLVYEYLPNGSL 535 (801)
Q Consensus 462 ~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~-~~~~~f~~E~~il~~l~-HpnIV~l~g~~~--~~~~LV~E~~~~gsL 535 (801)
.||.|..|.|++.++. |..+|||.+..... ...+.+...++++.+-+ .|+||+-+|+|- ....+.||.| ...+
T Consensus 99 dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelM-s~C~ 177 (391)
T KOG0983|consen 99 DLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELM-STCA 177 (391)
T ss_pred hhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHH-HHHH
Confidence 3999999999999886 69999999876543 34456777788777664 899999999984 3567889988 4456
Q ss_pred hhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCCCcc
Q 003703 536 QDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFH 615 (801)
Q Consensus 536 ~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~~~~ 615 (801)
+.+|.+.. .+++....-++...++.||.||...+ +|||||+||+|||||..|++||||||++-.+.+...
T Consensus 178 ekLlkrik--~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkA------ 247 (391)
T KOG0983|consen 178 EKLLKRIK--GPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKA------ 247 (391)
T ss_pred HHHHHHhc--CCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecccccceeecccc------
Confidence 66665443 46888888899999999999999876 699999999999999999999999999988765442
Q ss_pred ccCCCCCCCCCCCccccc---cCCCCcchhHHhHHHHHHHHHhCCCCCCChhH---HHHHhhcCccccccCCCCCCCCHH
Q 003703 616 RSTAPKGSFPYADPEYHR---TGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE---VRRAVSCGKLSSILDPLAGDWPTF 689 (801)
Q Consensus 616 ~~~~~~Gt~~Y~APE~~~---~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~---~~~~~~~g~~~~~~d~~~~~~~~~ 689 (801)
.+..+|-+.|||||.+. ...|+.++|||||||.|+||.||+.||..-+. +...+.. .....++ .-..
T Consensus 248 -htrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln-~ePP~L~-----~~~g 320 (391)
T KOG0983|consen 248 -HTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLN-EEPPLLP-----GHMG 320 (391)
T ss_pred -cccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHh-cCCCCCC-----cccC
Confidence 34567999999999885 34799999999999999999999999975332 2222211 1111111 1122
Q ss_pred HHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHHhhhcccCCCCCcc
Q 003703 690 VARRLVDLGLQCCELYGRERPDITPSLVKELEQLHVAEERPVPSFF 735 (801)
Q Consensus 690 ~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~l~~~~~~~~p~~~ 735 (801)
.+..+.+++..||..|+.+||.+.+.+.+.+-......+.+++.||
T Consensus 321 FSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~ye~a~~dVa~WF 366 (391)
T KOG0983|consen 321 FSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIKRYETAEVDVASWF 366 (391)
T ss_pred cCHHHHHHHHHHhhcCcccCcchHHHhcCcceeecchhhccHHHHH
Confidence 6778999999999999999999996665555433333334444443
No 307
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=3.6e-34 Score=302.04 Aligned_cols=238 Identities=26% Similarity=0.308 Sum_probs=195.8
Q ss_pred CccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccceeee
Q 003703 456 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYE 528 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~---~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E 528 (801)
+|...+.||.|+||.||+|... +..||+|.+..... .....+.+|+.++++++||||+++++++.+ ..++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 4777889999999999999885 89999999975432 334578899999999999999999998843 5789999
Q ss_pred cCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCC
Q 003703 529 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDT 608 (801)
Q Consensus 529 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~ 608 (801)
|+++++|.+++... .++++..+..|+.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~~L~~~l~~~---~~l~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 154 (258)
T cd05578 81 LLLGGDLRYHLSQK---VKFSEEQVKFWICEIVLALEYLHSKG---IIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT 154 (258)
T ss_pred CCCCCCHHHHHHhc---CCcCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEEcCCCCEEEeecccccccCCCc
Confidence 99999999998654 36888999999999999999999987 9999999999999999999999999988764432
Q ss_pred CcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhH--HHHHhhcCccccccCCCCCCC
Q 003703 609 LYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILDPLAGDW 686 (801)
Q Consensus 609 ~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~--~~~~~~~g~~~~~~d~~~~~~ 686 (801)
......|+..|+|||++.+..++.++||||||+++|+|++|..||..... .......... .....
T Consensus 155 -------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~------~~~~~ 221 (258)
T cd05578 155 -------LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQET------ADVLY 221 (258)
T ss_pred -------cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhcc------ccccC
Confidence 12345688999999999888899999999999999999999999975432 1111111110 11223
Q ss_pred CHHHHHHHHHHHHHhhhhCCCCCCCc
Q 003703 687 PTFVARRLVDLGLQCCELYGRERPDI 712 (801)
Q Consensus 687 ~~~~~~~l~~Li~~Cl~~dP~~RPt~ 712 (801)
+...+..+.+++.+||+.||.+||+.
T Consensus 222 ~~~~~~~~~~~i~~~l~~~p~~R~~~ 247 (258)
T cd05578 222 PATWSTEAIDAINKLLERDPQKRLGD 247 (258)
T ss_pred cccCcHHHHHHHHHHccCChhHcCCc
Confidence 33455789999999999999999999
No 308
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=9.1e-34 Score=305.04 Aligned_cols=252 Identities=23% Similarity=0.253 Sum_probs=190.7
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCC-CCceeeEeccccC--C-----
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQ-HPHLVTLLGACPE--A----- 522 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~--~~~~~f~~E~~il~~l~-HpnIV~l~g~~~~--~----- 522 (801)
++|...+.||+|+||.||+|.+. |..||||.+..... .....+.+|+.++..++ ||||+++++++.. .
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 36888889999999999999885 78999998765432 22356888999999995 6999999998732 2
Q ss_pred cceeeecCCCCchhhhhhhcCC--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecC-CCCeeeeccc
Q 003703 523 WSLVYEYLPNGSLQDRLFRKSN--VSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDS-ELSSKICDFG 599 (801)
Q Consensus 523 ~~LV~E~~~~gsL~~~L~~~~~--~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~-~~~vKL~DFG 599 (801)
.++||||+++ +|.+++..... ...+++..++.++.||+.||.|||+.+ |+||||||+||+++. ++.+||+|||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~---i~H~dl~~~nil~~~~~~~~kl~dfg 156 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHG---VMHRDLKPQNLLVDKQKGLLKIADLG 156 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChHHEEEecCCCeEEEeecc
Confidence 5899999975 78887765432 346899999999999999999999987 999999999999998 8999999999
Q ss_pred ceeeccCCCCcCCCccccCCCCCCCCCCCcccccc-CCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhhc----C-
Q 003703 600 ICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSC----G- 673 (801)
Q Consensus 600 la~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~-~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~----g- 673 (801)
+++.+.... .......+++.|+|||++.+ ..++.++|||||||++|+|++|.+||............ +
T Consensus 157 ~~~~~~~~~------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~ 230 (295)
T cd07837 157 LGRAFSIPV------KSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGT 230 (295)
T ss_pred cceecCCCc------cccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCC
Confidence 998654321 11233457889999998765 45799999999999999999999999754433221110 0
Q ss_pred -cc---cccc---C----C-----CCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 674 -KL---SSIL---D----P-----LAGDWPTFVARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 674 -~~---~~~~---d----~-----~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
.. .... + + .........+..+.+++.+||..||.+||++.+.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil 289 (295)
T cd07837 231 PTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAAL 289 (295)
T ss_pred CChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHh
Confidence 00 0000 0 0 00000112456789999999999999999998544
No 309
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=8.2e-34 Score=303.12 Aligned_cols=236 Identities=25% Similarity=0.363 Sum_probs=189.3
Q ss_pred eeecCceEEEEEEEC--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEecccc--CCcceeeecCCCCch
Q 003703 463 VGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYLPNGSL 535 (801)
Q Consensus 463 LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~---~~~~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~LV~E~~~~gsL 535 (801)
||+|+||+||++... |..||+|.+..... .....+..|+.+|.+++||||+++++++. +..++||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 699999999999764 88999999865432 22335678999999999999999998874 457899999999999
Q ss_pred hhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCCCcc
Q 003703 536 QDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFH 615 (801)
Q Consensus 536 ~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~~~~ 615 (801)
.+++..... ..+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.+||+|||++.......
T Consensus 81 ~~~l~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~------- 149 (277)
T cd05577 81 KYHIYNVGE-PGFPEARAIFYAAQIICGLEHLHQRR---IVYRDLKPENVLLDDHGNVRISDLGLAVELKGGK------- 149 (277)
T ss_pred HHHHHHcCc-CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEccCcchhhhccCC-------
Confidence 999876543 46889999999999999999999987 9999999999999999999999999987654321
Q ss_pred ccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhH--HHHHhhcCccccccCCCCCCCCHHHHHH
Q 003703 616 RSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWPTFVARR 693 (801)
Q Consensus 616 ~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~--~~~~~~~g~~~~~~d~~~~~~~~~~~~~ 693 (801)
......|+..|+|||++.+..++.++|||||||++|+|++|+.||..... ....+...... .....+...+..
T Consensus 150 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 224 (277)
T cd05577 150 KIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLE-----MAVEYPDKFSPE 224 (277)
T ss_pred ccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhcccc-----ccccCCccCCHH
Confidence 12344688899999999888899999999999999999999999964332 11111111111 111233345678
Q ss_pred HHHHHHHhhhhCCCCCCCchH
Q 003703 694 LVDLGLQCCELYGRERPDITP 714 (801)
Q Consensus 694 l~~Li~~Cl~~dP~~RPt~~e 714 (801)
+.+++.+||+.+|.+||+..+
T Consensus 225 ~~~li~~~l~~~p~~R~~~~~ 245 (277)
T cd05577 225 AKDLCEALLQKDPEKRLGCRG 245 (277)
T ss_pred HHHHHHHHccCChhHccCCCc
Confidence 899999999999999997775
No 310
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.9e-34 Score=313.11 Aligned_cols=250 Identities=26% Similarity=0.319 Sum_probs=196.6
Q ss_pred cCccccceeeecCceEEEEEEEC-CeEEEEEEeccCCc--ccHHHHHHHHHHHhcC-CCCceeeEeccc--cCCcceeee
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML-GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKL-QHPHLVTLLGAC--PEAWSLVYE 528 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~-g~~vAiK~l~~~~~--~~~~~f~~E~~il~~l-~HpnIV~l~g~~--~~~~~LV~E 528 (801)
..|...++||.||.+.||++... .+.||+|++..... +....|.+|+..|.+| .|.+||+||+|- ++..|||||
T Consensus 361 ~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE 440 (677)
T KOG0596|consen 361 REYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVME 440 (677)
T ss_pred chhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEee
Confidence 45778889999999999999886 56788887655433 3445699999999999 499999999986 456889999
Q ss_pred cCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCC
Q 003703 529 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDT 608 (801)
Q Consensus 529 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~ 608 (801)
|- ..+|..+|..+.. ....| .+..+..|++.|+.++|..+ |||.||||.|+|+-. |.+||+|||+|..+..+.
T Consensus 441 ~G-d~DL~kiL~k~~~-~~~~~-~lk~ywkqML~aV~~IH~~g---IVHSDLKPANFLlVk-G~LKLIDFGIA~aI~~DT 513 (677)
T KOG0596|consen 441 CG-DIDLNKILKKKKS-IDPDW-FLKFYWKQMLLAVKTIHQHG---IVHSDLKPANFLLVK-GRLKLIDFGIANAIQPDT 513 (677)
T ss_pred cc-cccHHHHHHhccC-CCchH-HHHHHHHHHHHHHHHHHHhc---eeecCCCcccEEEEe-eeEEeeeechhcccCccc
Confidence 86 6799999977654 23345 56778899999999999988 999999999999965 589999999999988766
Q ss_pred CcCCCccccCCCCCCCCCCCccccccC-----------CCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhhcCcccc
Q 003703 609 LYLPSFHRSTAPKGSFPYADPEYHRTG-----------VLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSS 677 (801)
Q Consensus 609 ~~~~~~~~~~~~~Gt~~Y~APE~~~~~-----------~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~g~~~~ 677 (801)
... .....+||+.||+||.+... +.++++||||||||||+|+.|++||+.....+. ++..
T Consensus 514 TsI----~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~a-----Kl~a 584 (677)
T KOG0596|consen 514 TSI----VKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIA-----KLHA 584 (677)
T ss_pred cce----eeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHH-----HHHh
Confidence 432 24567899999999987532 256799999999999999999999986554433 3455
Q ss_pred ccCCCC-CCCCHHHH-HHHHHHHHHhhhhCCCCCCCchHHHHHHH
Q 003703 678 ILDPLA-GDWPTFVA-RRLVDLGLQCCELYGRERPDITPSLVKEL 720 (801)
Q Consensus 678 ~~d~~~-~~~~~~~~-~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L 720 (801)
+.||.. -+||..-. ..+.+++..||..||++||+..+.|.+.+
T Consensus 585 I~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqhpF 629 (677)
T KOG0596|consen 585 ITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQHPF 629 (677)
T ss_pred hcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcCcc
Confidence 666632 23332211 13999999999999999999996554433
No 311
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=4.5e-33 Score=291.60 Aligned_cols=247 Identities=26% Similarity=0.395 Sum_probs=201.3
Q ss_pred CccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEeccccC----Ccceee
Q 003703 456 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACPE----AWSLVY 527 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~--~~~~~f~~E~~il~~l~HpnIV~l~g~~~~----~~~LV~ 527 (801)
+|...+.||+|+||.||+|... +..|++|++..... .....+.+|+.++++++||||+++++.+.+ ..++|+
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 4667789999999999999986 88999999876543 345578899999999999999999998854 478999
Q ss_pred ecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCC
Q 003703 528 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 607 (801)
Q Consensus 528 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~ 607 (801)
||+++++|.+++.... .+++..+..++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||.+......
T Consensus 81 e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lh~~~---~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 154 (260)
T cd06606 81 EYVSGGSLSSLLKKFG---KLPEPVIRKYTRQILEGLAYLHSNG---IVHRDIKGANILVDSDGVVKLADFGCAKRLGDI 154 (260)
T ss_pred EecCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEcCCCCEEEcccccEEecccc
Confidence 9999999999987653 7899999999999999999999977 999999999999999999999999999887654
Q ss_pred CCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHH-HHHhhcCccccccCCCCCCC
Q 003703 608 TLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEV-RRAVSCGKLSSILDPLAGDW 686 (801)
Q Consensus 608 ~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~-~~~~~~g~~~~~~d~~~~~~ 686 (801)
... .......++..|++||.+.+..++.++||||||+++|+|++|..||...... ........ .......
T Consensus 155 ~~~----~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~ 225 (260)
T cd06606 155 ETG----EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGS-----SGEPPEI 225 (260)
T ss_pred ccc----ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccc-----cCCCcCC
Confidence 321 0123456899999999998888999999999999999999999999754421 11111110 0111233
Q ss_pred CHHHHHHHHHHHHHhhhhCCCCCCCchHHHH
Q 003703 687 PTFVARRLVDLGLQCCELYGRERPDITPSLV 717 (801)
Q Consensus 687 ~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~ 717 (801)
+...+..+.+++.+|+..+|.+||++.+.+.
T Consensus 226 ~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 226 PEHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred CcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 4445678999999999999999999985443
No 312
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=1.2e-33 Score=305.27 Aligned_cols=256 Identities=21% Similarity=0.275 Sum_probs=180.5
Q ss_pred cCccccceeeecCceEEEEEEECC-----eEEEEEEeccCCcccH-----------HHHHHHHHHHhcCCCCceeeEecc
Q 003703 455 CNFSESFKVGQGGFGCVYKGEMLG-----RTVAIKMLYSHNMQGQ-----------LEFQQEVRVLSKLQHPHLVTLLGA 518 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~g-----~~vAiK~l~~~~~~~~-----------~~f~~E~~il~~l~HpnIV~l~g~ 518 (801)
+.|...+.||+|+||.||+|...+ ..+|+|+......... .....+...+..+.|+|+++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 578888999999999999998753 3667776433221111 012234445667799999999987
Q ss_pred ccCC------cceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCC
Q 003703 519 CPEA------WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELS 592 (801)
Q Consensus 519 ~~~~------~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~ 592 (801)
+... .+++++++. .++.+.+... ..+++..+..|+.|++.||.|||+.+ |+||||||+|||++.++.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~~---iiHrDiKp~Nill~~~~~ 164 (294)
T PHA02882 92 GSFKRCRMYYRFILLEKLV-ENTKEIFKRI---KCKNKKLIKNIMKDMLTTLEYIHEHG---ISHGDIKPENIMVDGNNR 164 (294)
T ss_pred eeEecCCceEEEEEEehhc-cCHHHHHHhh---ccCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCc
Confidence 6322 256777763 4565555432 23577889999999999999999987 999999999999999999
Q ss_pred eeeecccceeeccCCCCcCC-CccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhH---HHH
Q 003703 593 SKICDFGICRLVTEDTLYLP-SFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE---VRR 668 (801)
Q Consensus 593 vKL~DFGla~~~~~~~~~~~-~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~---~~~ 668 (801)
++|+|||+|+.+........ .........||+.|+|||++.+..++.++|||||||+||||++|++||..... ...
T Consensus 165 ~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~ 244 (294)
T PHA02882 165 GYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIH 244 (294)
T ss_pred EEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHH
Confidence 99999999987643221110 11112345799999999999999999999999999999999999999964421 111
Q ss_pred HhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHH
Q 003703 669 AVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKEL 720 (801)
Q Consensus 669 ~~~~g~~~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L 720 (801)
....+-+..+..+.. .....+..+.+++..|+..+|.+||++. .+.+.|
T Consensus 245 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~rp~~~-~l~~~~ 293 (294)
T PHA02882 245 AAKCDFIKRLHEGKI--KIKNANKFIYDFIECVTKLSYEEKPDYD-ALIKIF 293 (294)
T ss_pred HhHHHHHHHhhhhhh--ccCCCCHHHHHHHHHHHhCCCCCCCCHH-HHHHhh
Confidence 111111111111100 0112346789999999999999999998 565544
No 313
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=2.4e-33 Score=297.21 Aligned_cols=246 Identities=25% Similarity=0.324 Sum_probs=195.8
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCC-----cccHHHHHHHHHHHhcCCCCceeeEeccccC----Cc
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHN-----MQGQLEFQQEVRVLSKLQHPHLVTLLGACPE----AW 523 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~-----~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~----~~ 523 (801)
.+|...+.||+|+||.||+|.+. |..||+|.+.... ......|.+|+.++.+++||||+++++++.+ ..
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 46888899999999999999874 8899999875431 1223468899999999999999999998743 26
Q ss_pred ceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceee
Q 003703 524 SLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRL 603 (801)
Q Consensus 524 ~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~ 603 (801)
++++||+++++|.+++.... .+++.....++.+++.||.|||+.+ ++|+||||+||+++.++.++|+|||+++.
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~---~l~~~~~~~~~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~ 155 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYG---ALTENVTRRYTRQILQGVSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKR 155 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEECccccccc
Confidence 78999999999999886543 4788999999999999999999987 99999999999999999999999999986
Q ss_pred ccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhhcCccccccCCCC
Q 003703 604 VTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLA 683 (801)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~g~~~~~~d~~~ 683 (801)
....... ........|++.|+|||++.+..++.++|||||||++|+|++|+.||............. .-+..
T Consensus 156 ~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~-----~~~~~ 227 (264)
T cd06653 156 IQTICMS---GTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIA-----TQPTK 227 (264)
T ss_pred ccccccc---CccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHH-----cCCCC
Confidence 5432110 011234568999999999988889999999999999999999999997544332221111 01112
Q ss_pred CCCCHHHHHHHHHHHHHhhhhCCCCCCCchHH
Q 003703 684 GDWPTFVARRLVDLGLQCCELYGRERPDITPS 715 (801)
Q Consensus 684 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~ 715 (801)
...|...+..+.+++.+||. +|..||+..+.
T Consensus 228 ~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~ 258 (264)
T cd06653 228 PMLPDGVSDACRDFLKQIFV-EEKRRPTAEFL 258 (264)
T ss_pred CCCCcccCHHHHHHHHHHhc-CcccCccHHHH
Confidence 23455677889999999999 57999998743
No 314
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=2.8e-33 Score=295.96 Aligned_cols=232 Identities=26% Similarity=0.345 Sum_probs=190.9
Q ss_pred eeecCceEEEEEEEC--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEeccccC--CcceeeecCCCCch
Q 003703 463 VGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYLPNGSL 535 (801)
Q Consensus 463 LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~---~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E~~~~gsL 535 (801)
||.|+||.||++... +..||+|++..... .....+.+|+.++..++||||+++++++.+ ..++||||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 699999999999987 89999999875443 233568899999999999999999998843 47899999999999
Q ss_pred hhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCCCcc
Q 003703 536 QDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFH 615 (801)
Q Consensus 536 ~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~~~~ 615 (801)
.+++.+.. .+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||+++......
T Consensus 81 ~~~l~~~~---~l~~~~~~~~~~~i~~~l~~lH~~~---~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~------- 147 (262)
T cd05572 81 WTILRDRG---LFDEYTARFYIACVVLAFEYLHNRG---IIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ------- 147 (262)
T ss_pred HHHHhhcC---CCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCHHHEEEcCCCCEEEeeCCcccccCccc-------
Confidence 99997643 4788999999999999999999987 9999999999999999999999999998765432
Q ss_pred ccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChh--H--HHHHhhcCccccccCCCCCCCCHHHH
Q 003703 616 RSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAG--E--VRRAVSCGKLSSILDPLAGDWPTFVA 691 (801)
Q Consensus 616 ~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~--~--~~~~~~~g~~~~~~d~~~~~~~~~~~ 691 (801)
......|++.|++||++....++.++|+||||+++|+|++|..||.... . ....+..+ .....+|...+
T Consensus 148 ~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~ 220 (262)
T cd05572 148 KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKG-------NGKLEFPNYID 220 (262)
T ss_pred ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhcc-------CCCCCCCcccC
Confidence 1234468999999999988889999999999999999999999997544 1 11111111 11223344446
Q ss_pred HHHHHHHHHhhhhCCCCCCCchH
Q 003703 692 RRLVDLGLQCCELYGRERPDITP 714 (801)
Q Consensus 692 ~~l~~Li~~Cl~~dP~~RPt~~e 714 (801)
..+.+++.+||+.+|.+||++.+
T Consensus 221 ~~~~~~i~~~l~~~p~~R~~~~~ 243 (262)
T cd05572 221 KAAKDLIKQLLRRNPEERLGNLK 243 (262)
T ss_pred HHHHHHHHHHccCChhhCcCCcc
Confidence 78999999999999999999653
No 315
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=2.8e-33 Score=301.28 Aligned_cols=250 Identities=24% Similarity=0.331 Sum_probs=192.0
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcc--cHHHHHHHHHHHhcCCCCceeeEecccc----CCccee
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ--GQLEFQQEVRVLSKLQHPHLVTLLGACP----EAWSLV 526 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~--~~~~f~~E~~il~~l~HpnIV~l~g~~~----~~~~LV 526 (801)
++|...+.||.|+||.||+|... +..||+|.++..... ....+.+|+.++.+++||||+++++++. ...++|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 35777788999999999999985 789999998754332 2234678999999999999999999873 457899
Q ss_pred eecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccC
Q 003703 527 YEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTE 606 (801)
Q Consensus 527 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~ 606 (801)
|||++ ++|.+++.... ..+++..+..|+.||+.||.|||+.+ ++|+||||+|||++.++.+||+|||++.....
T Consensus 85 ~e~~~-~~L~~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~ 158 (293)
T cd07843 85 MEYVE-HDLKSLMETMK--QPFLQSEVKCLMLQLLSGVAHLHDNW---ILHRDLKTSNLLLNNRGILKICDFGLAREYGS 158 (293)
T ss_pred ehhcC-cCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCcEEEeecCceeeccC
Confidence 99997 58988886544 36899999999999999999999987 99999999999999999999999999987654
Q ss_pred CCCcCCCccccCCCCCCCCCCCccccccC-CCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHH--hh------------
Q 003703 607 DTLYLPSFHRSTAPKGSFPYADPEYHRTG-VLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRA--VS------------ 671 (801)
Q Consensus 607 ~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~-~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~--~~------------ 671 (801)
... ......+++.|+|||++.+. .++.++|||||||++|+|++|.+||......... +.
T Consensus 159 ~~~------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (293)
T cd07843 159 PLK------PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWP 232 (293)
T ss_pred Ccc------ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHH
Confidence 321 12334578999999988654 4689999999999999999999999643221100 00
Q ss_pred ---c------CccccccCC-CCCCCCHH-HHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 672 ---C------GKLSSILDP-LAGDWPTF-VARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 672 ---~------g~~~~~~d~-~~~~~~~~-~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
. ..+...... ....++.. ++..+.+++.+||+.+|++||++.+.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell 288 (293)
T cd07843 233 GFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDAL 288 (293)
T ss_pred HhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHh
Confidence 0 000000000 01122222 467789999999999999999998544
No 316
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-35 Score=342.70 Aligned_cols=253 Identities=26% Similarity=0.332 Sum_probs=203.8
Q ss_pred HHHHhcCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcc--cHHHHHHHHHHHhcCCCCceeeEeccc--cCCc
Q 003703 450 LQTATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ--GQLEFQQEVRVLSKLQHPHLVTLLGAC--PEAW 523 (801)
Q Consensus 450 l~~at~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~--~~~~f~~E~~il~~l~HpnIV~l~g~~--~~~~ 523 (801)
+...+-++..+..||.|.||.||.|... |...|+|-++..... ....+.+|+.+|..|+|||+|++||+- .+..
T Consensus 1230 lsnV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv 1309 (1509)
T KOG4645|consen 1230 LSNVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKV 1309 (1509)
T ss_pred hccceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHH
Confidence 5566778888999999999999999774 889999987654432 334578999999999999999999986 4568
Q ss_pred ceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceee
Q 003703 524 SLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRL 603 (801)
Q Consensus 524 ~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~ 603 (801)
+|.||||.+|+|.+.+.... ..+......+..|++.|+.|||+.| ||||||||.||||+.+|.+|++|||.|..
T Consensus 1310 ~IFMEyC~~GsLa~ll~~gr---i~dE~vt~vyt~qll~gla~LH~~g---IVHRDIK~aNI~Ld~~g~iK~~DFGsa~k 1383 (1509)
T KOG4645|consen 1310 YIFMEYCEGGSLASLLEHGR---IEDEMVTRVYTKQLLEGLAYLHEHG---IVHRDIKPANILLDFNGLIKYGDFGSAVK 1383 (1509)
T ss_pred HHHHHHhccCcHHHHHHhcc---hhhhhHHHHHHHHHHHHHHHHHhcC---ceecCCCccceeeecCCcEEeecccceeE
Confidence 99999999999999886543 2344455567889999999999998 99999999999999999999999999998
Q ss_pred ccCCCCcCCCccccCCCCCCCCCCCccccccC---CCCcchhHHhHHHHHHHHHhCCCCCCChhHHHH---HhhcCcccc
Q 003703 604 VTEDTLYLPSFHRSTAPKGSFPYADPEYHRTG---VLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRR---AVSCGKLSS 677 (801)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~---~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~---~~~~g~~~~ 677 (801)
+.......+ .......||+.|||||++.+. +...+.||||||||++||.||+.||...+.-|. .+..|+..
T Consensus 1384 i~~~~~~~~--~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~P- 1460 (1509)
T KOG4645|consen 1384 IKNNAQTMP--GELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHKP- 1460 (1509)
T ss_pred ecCchhcCC--HHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCCC-
Confidence 876542222 233467899999999999653 467799999999999999999999985554332 23344433
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHH
Q 003703 678 ILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVK 718 (801)
Q Consensus 678 ~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~ 718 (801)
..|...+..-.+++.+|+..||+.|.+..+.+.+
T Consensus 1461 -------q~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1461 -------QIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred -------CCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 4566688888999999999999999877644433
No 317
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=5e-33 Score=303.47 Aligned_cols=241 Identities=25% Similarity=0.357 Sum_probs=189.7
Q ss_pred ccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcc---cHHHHHHHHHHHhcCCCCceeeEeccccC--Ccceeeec
Q 003703 457 FSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ---GQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEY 529 (801)
Q Consensus 457 f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~---~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E~ 529 (801)
|...+.||+|+||.||+|+.. |..||+|.+...... ....+.+|+.++++++|||+++++++|.+ ..++||||
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 106 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY 106 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence 666778999999999999874 789999998654322 23468899999999999999999999843 47899999
Q ss_pred CCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCC
Q 003703 530 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTL 609 (801)
Q Consensus 530 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~ 609 (801)
++ |+|.+.+.... .+++|..+..++.+++.||.|||+.+ |+||||+|+||+++.++.+||+|||++.....
T Consensus 107 ~~-g~l~~~~~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~~---i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~--- 177 (317)
T cd06635 107 CL-GSASDLLEVHK--KPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSASIASP--- 177 (317)
T ss_pred CC-CCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcccEEECCCCCEEEecCCCccccCC---
Confidence 96 57777765433 46899999999999999999999987 99999999999999999999999999875432
Q ss_pred cCCCccccCCCCCCCCCCCccccc---cCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHH--HHhhcCccccccCCCCC
Q 003703 610 YLPSFHRSTAPKGSFPYADPEYHR---TGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVR--RAVSCGKLSSILDPLAG 684 (801)
Q Consensus 610 ~~~~~~~~~~~~Gt~~Y~APE~~~---~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~--~~~~~g~~~~~~d~~~~ 684 (801)
.....|++.|+|||++. .+.++.++|||||||++|||++|++||....... ..+..+....
T Consensus 178 -------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~------- 243 (317)
T cd06635 178 -------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPT------- 243 (317)
T ss_pred -------cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCCC-------
Confidence 12346889999999873 4578999999999999999999999986433221 1111111110
Q ss_pred CCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHH
Q 003703 685 DWPTFVARRLVDLGLQCCELYGRERPDITPSLVKEL 720 (801)
Q Consensus 685 ~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L 720 (801)
..+...+..+.+|+.+||+.+|.+||++.+.+.+.+
T Consensus 244 ~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~ 279 (317)
T cd06635 244 LQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMF 279 (317)
T ss_pred CCCccccHHHHHHHHHHccCCcccCcCHHHHHhChh
Confidence 111234567899999999999999999985444333
No 318
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=3.6e-33 Score=303.56 Aligned_cols=254 Identities=19% Similarity=0.215 Sum_probs=191.9
Q ss_pred ceeeecCceEEEEEEECCeEEEEEEeccCC--cccHHHHHHHHHHHhcCCCCceeeEecccc--CCcceeeecCCCCchh
Q 003703 461 FKVGQGGFGCVYKGEMLGRTVAIKMLYSHN--MQGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYLPNGSLQ 536 (801)
Q Consensus 461 ~~LG~G~fG~Vy~g~~~g~~vAiK~l~~~~--~~~~~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~LV~E~~~~gsL~ 536 (801)
+.+|.|+++.||++...|..||||++.... ......+.+|+.++..++||||+++++++. +..+++|||+++|+|.
T Consensus 8 ~~~~~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~ 87 (314)
T cd08216 8 KCFEDLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCE 87 (314)
T ss_pred HhhcCCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHH
Confidence 345666777777777789999999987652 334457899999999999999999999884 3578999999999999
Q ss_pred hhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCc-CCCcc
Q 003703 537 DRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLY-LPSFH 615 (801)
Q Consensus 537 ~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~-~~~~~ 615 (801)
+++..... ..+++.....++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||.+......... .....
T Consensus 88 ~~l~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~~---ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~ 163 (314)
T cd08216 88 DLLKTHFP-EGLPELAIAFILKDVLNALDYIHSKG---FIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHD 163 (314)
T ss_pred HHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCcceEEEecCCceEEecCccceeecccccccccccc
Confidence 99876432 35788999999999999999999987 999999999999999999999999998765432211 00111
Q ss_pred ccCCCCCCCCCCCcccccc--CCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhh--cCccccccC-----------
Q 003703 616 RSTAPKGSFPYADPEYHRT--GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVS--CGKLSSILD----------- 680 (801)
Q Consensus 616 ~~~~~~Gt~~Y~APE~~~~--~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~--~g~~~~~~d----------- 680 (801)
......++..|+|||++.. ..++.++|||||||++|||++|+.||.........+. .+....+++
T Consensus 164 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (314)
T cd08216 164 FPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSM 243 (314)
T ss_pred ccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCc
Confidence 1234567889999999865 4588999999999999999999999975443322211 111111111
Q ss_pred ---------C-----CCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHH
Q 003703 681 ---------P-----LAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVK 718 (801)
Q Consensus 681 ---------~-----~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~ 718 (801)
+ .....+...+..+.+|+.+||+.||.+||++.+.+.+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 295 (314)
T cd08216 244 SQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH 295 (314)
T ss_pred CcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence 0 0112233456789999999999999999999855433
No 319
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=2.3e-33 Score=304.73 Aligned_cols=199 Identities=25% Similarity=0.307 Sum_probs=163.2
Q ss_pred CccccceeeecCceEEEEEEE----CCeEEEEEEeccCC---cccHHHHHHHHHHHhcCCCCceeeEeccccC----Ccc
Q 003703 456 NFSESFKVGQGGFGCVYKGEM----LGRTVAIKMLYSHN---MQGQLEFQQEVRVLSKLQHPHLVTLLGACPE----AWS 524 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~----~g~~vAiK~l~~~~---~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~----~~~ 524 (801)
.|.....||+|+||.||+|.. .+..||+|.+.... ......+.+|+.++..++||||++++++|.+ ..+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 366778899999999999987 46899999997743 2333467889999999999999999999843 378
Q ss_pred eeeecCCCCchhhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecC----CCCeeeecc
Q 003703 525 LVYEYLPNGSLQDRLFRKS--NVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDS----ELSSKICDF 598 (801)
Q Consensus 525 LV~E~~~~gsL~~~L~~~~--~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~----~~~vKL~DF 598 (801)
+||||+++ +|.+.+.... ....++...+..|+.||+.||.|||+.+ |+||||||+|||++. ++.+||+||
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNW---VLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 99999965 6666654322 2236888999999999999999999987 999999999999999 899999999
Q ss_pred cceeeccCCCCcCCCccccCCCCCCCCCCCcccccc-CCCCcchhHHhHHHHHHHHHhCCCCCC
Q 003703 599 GICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVG 661 (801)
Q Consensus 599 Gla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~-~~~s~ksDVwSlGvvL~ELltG~~Pf~ 661 (801)
|+++.+...... ........||+.|+|||++.+ ..++.++|||||||++|+|++|++||.
T Consensus 157 g~~~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~ 217 (316)
T cd07842 157 GLARLFNAPLKP---LADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFK 217 (316)
T ss_pred ccccccCCCccc---ccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCc
Confidence 999876443211 112344578999999998766 458999999999999999999999996
No 320
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=3.8e-33 Score=309.14 Aligned_cols=252 Identities=21% Similarity=0.254 Sum_probs=194.2
Q ss_pred HhcCccccceeeecCceEEEEEEEC--CeEEEEEEeccCC--cccHHHHHHHHHHHhcCCCCceeeEeccccC-------
Q 003703 453 ATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHN--MQGQLEFQQEVRVLSKLQHPHLVTLLGACPE------- 521 (801)
Q Consensus 453 at~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~--~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~------- 521 (801)
..++|...+.||+|+||.||+|... |..||||.+.... ......+.+|+.++.+++||||++++++|..
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 4577999999999999999999874 8899999986432 2233457789999999999999999998732
Q ss_pred -CcceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccc
Q 003703 522 -AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGI 600 (801)
Q Consensus 522 -~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGl 600 (801)
..++||||+. ++|.+.+.. .++...+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 94 ~~~~lv~e~~~-~~l~~~~~~-----~l~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nil~~~~~~~kL~Dfg~ 164 (353)
T cd07850 94 QDVYLVMELMD-ANLCQVIQM-----DLDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 164 (353)
T ss_pred CcEEEEEeccC-CCHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEccCcc
Confidence 2589999995 588877743 2778889999999999999999987 99999999999999999999999999
Q ss_pred eeeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHH--h-h-cCc--
Q 003703 601 CRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRA--V-S-CGK-- 674 (801)
Q Consensus 601 a~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~--~-~-~g~-- 674 (801)
++...... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||...+..... + . .+.
T Consensus 165 ~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 237 (353)
T cd07850 165 ARTAGTSF-------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPS 237 (353)
T ss_pred ceeCCCCC-------CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence 98764322 123446889999999999999999999999999999999999999643321100 0 0 000
Q ss_pred -------------------------cccccCC----C-CCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHH
Q 003703 675 -------------------------LSSILDP----L-AGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKEL 720 (801)
Q Consensus 675 -------------------------~~~~~d~----~-~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L 720 (801)
+..++.. . ....+...+..+.+++.+||+.||.+||++.+.+.+.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~ 313 (353)
T cd07850 238 DEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPY 313 (353)
T ss_pred HHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChh
Confidence 0000000 0 00012234567899999999999999999997665543
No 321
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=2.9e-33 Score=301.31 Aligned_cols=252 Identities=23% Similarity=0.273 Sum_probs=189.0
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccceeee
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYE 528 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~--~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E 528 (801)
++|.....||.|+||.||+|... |+.||+|.+..... .....+.+|+.++++++||||+++++++.+ ..++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 46788889999999999999875 78999999865432 223468899999999999999999999853 5789999
Q ss_pred cCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecC-CCCeeeecccceeeccCC
Q 003703 529 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDS-ELSSKICDFGICRLVTED 607 (801)
Q Consensus 529 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~-~~~vKL~DFGla~~~~~~ 607 (801)
|++ ++|.+++..... ..+++.....++.||+.||.|||+.+ |+|+||+|+||+++. ++.+||+|||++......
T Consensus 82 ~~~-~~l~~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~---i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~ 156 (294)
T PLN00009 82 YLD-LDLKKHMDSSPD-FAKNPRLIKTYLYQILRGIAYCHSHR---VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIP 156 (294)
T ss_pred ccc-ccHHHHHHhCCC-CCcCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCcceEEEECCCCEEEEcccccccccCCC
Confidence 995 578777754432 34678888899999999999999987 999999999999985 567999999999765432
Q ss_pred CCcCCCccccCCCCCCCCCCCcccccc-CCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhhc----Cc-ccccc--
Q 003703 608 TLYLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSC----GK-LSSIL-- 679 (801)
Q Consensus 608 ~~~~~~~~~~~~~~Gt~~Y~APE~~~~-~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~----g~-~~~~~-- 679 (801)
.. ......|++.|+|||++.+ ..++.++|||||||++|+|+||++||............ +. .....
T Consensus 157 ~~------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (294)
T PLN00009 157 VR------TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPG 230 (294)
T ss_pred cc------ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccc
Confidence 11 1234467899999998865 45789999999999999999999999643322111100 00 00000
Q ss_pred -----C----------CCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHH
Q 003703 680 -----D----------PLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLV 717 (801)
Q Consensus 680 -----d----------~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~ 717 (801)
+ ..........+..+.+++.+|++.+|.+||++.+.+.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 231 VTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred cccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 0000011224567899999999999999999985443
No 322
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=1.9e-33 Score=309.42 Aligned_cols=254 Identities=22% Similarity=0.300 Sum_probs=191.3
Q ss_pred hcCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEeccccC-------Cc
Q 003703 454 TCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACPE-------AW 523 (801)
Q Consensus 454 t~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~-~~~~~f~~E~~il~~l~HpnIV~l~g~~~~-------~~ 523 (801)
+++|...+.||+|+||.||+|... |..||||.+..... .....+.+|+.++.+++||||+++++++.. ..
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 468899999999999999999874 88999999864322 233457889999999999999999987632 25
Q ss_pred ceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceee
Q 003703 524 SLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRL 603 (801)
Q Consensus 524 ~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~ 603 (801)
++|+||+. ++|.+.+.. ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 84 ~lv~e~~~-~~l~~~~~~----~~l~~~~~~~i~~ql~~aL~~LH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~~~~ 155 (336)
T cd07849 84 YIVQELME-TDLYKLIKT----QHLSNDHIQYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTNCDLKICDFGLARI 155 (336)
T ss_pred EEEehhcc-cCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCCCCEEECcccceee
Confidence 79999996 577776643 35889999999999999999999988 99999999999999999999999999987
Q ss_pred ccCCCCcCCCccccCCCCCCCCCCCcccccc-CCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHH------Hhhc---C
Q 003703 604 VTEDTLYLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRR------AVSC---G 673 (801)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~-~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~------~~~~---g 673 (801)
........ .......||+.|+|||++.+ ..++.++|||||||++|+|++|++||...+.... .+.. .
T Consensus 156 ~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~ 232 (336)
T cd07849 156 ADPEHDHT---GFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQE 232 (336)
T ss_pred cccccccc---CCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHH
Confidence 64332111 11234578999999998654 5689999999999999999999999964321110 0000 0
Q ss_pred ccccccCC------------CCCCC---CHHHHHHHHHHHHHhhhhCCCCCCCchHHHHH
Q 003703 674 KLSSILDP------------LAGDW---PTFVARRLVDLGLQCCELYGRERPDITPSLVK 718 (801)
Q Consensus 674 ~~~~~~d~------------~~~~~---~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~ 718 (801)
.+..+.+. ....+ ....+..+.+++.+||+.+|.+||++.+.+.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 233 DLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred HHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00000000 00000 11235678999999999999999999854443
No 323
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=7.1e-33 Score=290.30 Aligned_cols=242 Identities=26% Similarity=0.401 Sum_probs=198.4
Q ss_pred CccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccceeeec
Q 003703 456 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEY 529 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~--~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E~ 529 (801)
+|.....||+|+||.||++... +..||+|.+..... .....+.+|++++.+++|||++++++++.+ ..+++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 4667789999999999999875 78999999977654 344568999999999999999999998843 47899999
Q ss_pred CCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCC
Q 003703 530 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTL 609 (801)
Q Consensus 530 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~ 609 (801)
+++++|.+++... ..+++..+..++.+++.||.|||+.+ |+||||+|+||+++.++.++|+|||++........
T Consensus 81 ~~~~~L~~~~~~~---~~l~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 154 (254)
T cd06627 81 AENGSLRQIIKKF---GPFPESLVAVYVYQVLQGLAYLHEQG---VIHRDIKAANILTTKDGVVKLADFGVATKLNDVSK 154 (254)
T ss_pred CCCCcHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCHHHEEECCCCCEEEeccccceecCCCcc
Confidence 9999999988654 46899999999999999999999987 99999999999999999999999999987754332
Q ss_pred cCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhhcCccccccCCCCCCCCHH
Q 003703 610 YLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTF 689 (801)
Q Consensus 610 ~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~g~~~~~~d~~~~~~~~~ 689 (801)
. .....|+..|+|||+..+..++.++||||||+++|+|++|+.||.........+.... ......+..
T Consensus 155 ~------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~------~~~~~~~~~ 222 (254)
T cd06627 155 D------DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQ------DDHPPLPEG 222 (254)
T ss_pred c------ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhc------cCCCCCCCC
Confidence 1 2345689999999999888899999999999999999999999975443322222110 011123334
Q ss_pred HHHHHHHHHHHhhhhCCCCCCCchHH
Q 003703 690 VARRLVDLGLQCCELYGRERPDITPS 715 (801)
Q Consensus 690 ~~~~l~~Li~~Cl~~dP~~RPt~~e~ 715 (801)
.+..+.+++.+||..+|++||++.+.
T Consensus 223 ~~~~~~~~i~~~l~~~p~~R~~~~~~ 248 (254)
T cd06627 223 ISPELKDFLMQCFQKDPNLRPTAKQL 248 (254)
T ss_pred CCHHHHHHHHHHHhCChhhCcCHHHH
Confidence 56788999999999999999999843
No 324
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=5.3e-33 Score=299.92 Aligned_cols=239 Identities=22% Similarity=0.347 Sum_probs=191.6
Q ss_pred ceeeecCceEEEEEEEC--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEecccc--CCcceeeecCCCCchh
Q 003703 461 FKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYLPNGSLQ 536 (801)
Q Consensus 461 ~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~LV~E~~~~gsL~ 536 (801)
.+||+|+||.||++... |..||||.+..........+.+|+.+++.++||||+++++++. +..++||||+++++|.
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 105 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 105 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHH
Confidence 46999999999999874 8899999986544445566889999999999999999999874 4688999999999999
Q ss_pred hhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCCCccc
Q 003703 537 DRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHR 616 (801)
Q Consensus 537 ~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~~~~~ 616 (801)
+++.. ..+++.....++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++........ .
T Consensus 106 ~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~~g---ivH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~------~ 172 (292)
T cd06657 106 DIVTH----TRMNEEQIAAVCLAVLKALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP------R 172 (292)
T ss_pred HHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEcccccceecccccc------c
Confidence 87743 24789999999999999999999987 99999999999999999999999999876543221 1
Q ss_pred cCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHH--HHhhcCccccccCCCCCCCCHHHHHHH
Q 003703 617 STAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVR--RAVSCGKLSSILDPLAGDWPTFVARRL 694 (801)
Q Consensus 617 ~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~--~~~~~g~~~~~~d~~~~~~~~~~~~~l 694 (801)
.....|++.|++||++.+..++.++|||||||++|+|++|..||....... ..+..+ +. +.... ....+..+
T Consensus 173 ~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~-~~----~~~~~-~~~~~~~l 246 (292)
T cd06657 173 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN-LP----PKLKN-LHKVSPSL 246 (292)
T ss_pred ccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhh-CC----cccCC-cccCCHHH
Confidence 234568999999999988889999999999999999999999997543221 112111 11 11111 11234578
Q ss_pred HHHHHHhhhhCCCCCCCchHHHHH
Q 003703 695 VDLGLQCCELYGRERPDITPSLVK 718 (801)
Q Consensus 695 ~~Li~~Cl~~dP~~RPt~~e~l~~ 718 (801)
.+++.+||+.+|.+||++.+.+.+
T Consensus 247 ~~li~~~l~~~P~~R~~~~~ll~~ 270 (292)
T cd06657 247 KGFLDRLLVRDPAQRATAAELLKH 270 (292)
T ss_pred HHHHHHHHhCCcccCcCHHHHhcC
Confidence 899999999999999999865543
No 325
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=4.1e-33 Score=297.54 Aligned_cols=246 Identities=24% Similarity=0.306 Sum_probs=185.6
Q ss_pred ccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCC-CCceeeEecccc----CCcceeee
Q 003703 457 FSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQ-HPHLVTLLGACP----EAWSLVYE 528 (801)
Q Consensus 457 f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~-~~~~~f~~E~~il~~l~-HpnIV~l~g~~~----~~~~LV~E 528 (801)
|...+.||+|+||.||+|... +..||+|+++.... .......+|+.++.++. ||||++++++|. +..++|||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 455678999999999999874 78999999876432 22334557899999885 999999999884 34789999
Q ss_pred cCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCC
Q 003703 529 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDT 608 (801)
Q Consensus 529 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~ 608 (801)
|++ |+|.+.+.... ..++|..+..++.|++.||.|||+.+ ++||||+|+||+++. +.+||+|||+++......
T Consensus 81 ~~~-~~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~---i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~ 153 (282)
T cd07831 81 LMD-MNLYELIKGRK--RPLPEKRVKSYMYQLLKSLDHMHRNG---IFHRDIKPENILIKD-DILKLADFGSCRGIYSKP 153 (282)
T ss_pred cCC-ccHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEcC-CCeEEEecccccccccCC
Confidence 996 57877775533 46899999999999999999999987 999999999999999 999999999998764332
Q ss_pred CcCCCccccCCCCCCCCCCCccccc-cCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHH---HHhh-cCc---------
Q 003703 609 LYLPSFHRSTAPKGSFPYADPEYHR-TGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVR---RAVS-CGK--------- 674 (801)
Q Consensus 609 ~~~~~~~~~~~~~Gt~~Y~APE~~~-~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~---~~~~-~g~--------- 674 (801)
. .....+++.|+|||++. ++.++.++|||||||++|||++|.+||...+... .... .+.
T Consensus 154 ~-------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (282)
T cd07831 154 P-------YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKF 226 (282)
T ss_pred C-------cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhh
Confidence 1 12345889999999764 4567899999999999999999999996433211 0000 000
Q ss_pred ----cccccCCC-CC----CCCHHHHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 675 ----LSSILDPL-AG----DWPTFVARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 675 ----~~~~~d~~-~~----~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
......+. .. ......+..+.+|+.+||+.+|.+||++.+.+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l 277 (282)
T cd07831 227 RKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQAL 277 (282)
T ss_pred cccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHh
Confidence 00000000 00 01123567899999999999999999998543
No 326
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=3.1e-33 Score=301.77 Aligned_cols=248 Identities=22% Similarity=0.328 Sum_probs=189.7
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCC-CCceeeEeccccC--Ccceeee
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQ-HPHLVTLLGACPE--AWSLVYE 528 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~-~~~~~f~~E~~il~~l~-HpnIV~l~g~~~~--~~~LV~E 528 (801)
++|.....||+|+||.||+|.+. +..||||.+..... .....+..|+.++.+.. ||||++++++|.+ ..++|||
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e 94 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICME 94 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEee
Confidence 45677789999999999999987 89999999975433 23345667887777775 9999999999844 5789999
Q ss_pred cCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCC
Q 003703 529 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDT 608 (801)
Q Consensus 529 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~ 608 (801)
|++ ++|.+.+.... ..+++..+..++.+++.||.|||+.. +|+||||+|+||+++.++.+||+|||++..+....
T Consensus 95 ~~~-~~l~~l~~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~~--~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~ 169 (296)
T cd06618 95 LMS-TCLDKLLKRIQ--GPIPEDILGKMTVAIVKALHYLKEKH--GVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSK 169 (296)
T ss_pred ccC-cCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhhC--CEecCCCcHHHEEEcCCCCEEECccccchhccCCC
Confidence 984 57777665433 37899999999999999999999742 39999999999999999999999999987654322
Q ss_pred CcCCCccccCCCCCCCCCCCccccccCC----CCcchhHHhHHHHHHHHHhCCCCCCChhHHHH---HhhcCccccccCC
Q 003703 609 LYLPSFHRSTAPKGSFPYADPEYHRTGV----LTPKSDSYSFGLIILQLLTGRLPVGLAGEVRR---AVSCGKLSSILDP 681 (801)
Q Consensus 609 ~~~~~~~~~~~~~Gt~~Y~APE~~~~~~----~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~---~~~~g~~~~~~d~ 681 (801)
......|++.|+|||++.+.. ++.++||||||+++|+|++|+.||........ .+..+....+
T Consensus 170 -------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~--- 239 (296)
T cd06618 170 -------AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPPSL--- 239 (296)
T ss_pred -------cccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCCCCC---
Confidence 112345888999999986543 88999999999999999999999975322111 1111111110
Q ss_pred CCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHH
Q 003703 682 LAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKEL 720 (801)
Q Consensus 682 ~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L 720 (801)
......+..+.+|+.+||+.||.+||++.+.+.+.+
T Consensus 240 ---~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~ 275 (296)
T cd06618 240 ---PPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPF 275 (296)
T ss_pred ---CCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcChh
Confidence 111124567899999999999999999986554443
No 327
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=3.3e-33 Score=299.26 Aligned_cols=231 Identities=25% Similarity=0.347 Sum_probs=178.3
Q ss_pred eeeecCceEEEEEEEC--CeEEEEEEeccCCcc---cHHHHHHHHHHHh---cCCCCceeeEecccc--CCcceeeecCC
Q 003703 462 KVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ---GQLEFQQEVRVLS---KLQHPHLVTLLGACP--EAWSLVYEYLP 531 (801)
Q Consensus 462 ~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~---~~~~f~~E~~il~---~l~HpnIV~l~g~~~--~~~~LV~E~~~ 531 (801)
.||+|+||.||++... |..||+|.+...... ....+.+|..++. ..+||||+.+++++. +..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 3899999999999874 789999998654322 1223445544443 347999999998874 35789999999
Q ss_pred CCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcC
Q 003703 532 NGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYL 611 (801)
Q Consensus 532 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~ 611 (801)
+|+|.+++.... .+++..+..|+.|++.||.|||+.+ |+||||||+|||++.++.++|+|||++.......
T Consensus 81 ~~~L~~~i~~~~---~l~~~~~~~i~~qi~~al~~lH~~~---ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~--- 151 (279)
T cd05633 81 GGDLHYHLSQHG---VFSEKEMRFYATEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK--- 151 (279)
T ss_pred CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---cCCCCCCHHHEEECCCCCEEEccCCcceeccccC---
Confidence 999999886543 5899999999999999999999988 9999999999999999999999999987553221
Q ss_pred CCccccCCCCCCCCCCCcccccc-CCCCcchhHHhHHHHHHHHHhCCCCCCChhH-HHHHhhcCccccccCCCCCCCCHH
Q 003703 612 PSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGE-VRRAVSCGKLSSILDPLAGDWPTF 689 (801)
Q Consensus 612 ~~~~~~~~~~Gt~~Y~APE~~~~-~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~-~~~~~~~g~~~~~~d~~~~~~~~~ 689 (801)
.....||+.|+|||.+.+ ..++.++|||||||++|+|++|..||..... ....+..... ......+..
T Consensus 152 -----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~-----~~~~~~~~~ 221 (279)
T cd05633 152 -----PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL-----TVNVELPDS 221 (279)
T ss_pred -----ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhh-----cCCcCCccc
Confidence 123469999999998864 5689999999999999999999999963221 1111111111 011123344
Q ss_pred HHHHHHHHHHHhhhhCCCCCCC
Q 003703 690 VARRLVDLGLQCCELYGRERPD 711 (801)
Q Consensus 690 ~~~~l~~Li~~Cl~~dP~~RPt 711 (801)
.+..+.+++.+||+.||.+||+
T Consensus 222 ~~~~~~~li~~~l~~~p~~R~~ 243 (279)
T cd05633 222 FSPELKSLLEGLLQRDVSKRLG 243 (279)
T ss_pred cCHHHHHHHHHHhcCCHHHhcC
Confidence 5678999999999999999995
No 328
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=4.5e-33 Score=306.39 Aligned_cols=257 Identities=24% Similarity=0.309 Sum_probs=193.3
Q ss_pred HhcCccccceeeecCceEEEEEEEC--CeEEEEEEeccCC--cccHHHHHHHHHHHhcC-CCCceeeEeccccC----Cc
Q 003703 453 ATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHN--MQGQLEFQQEVRVLSKL-QHPHLVTLLGACPE----AW 523 (801)
Q Consensus 453 at~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~--~~~~~~f~~E~~il~~l-~HpnIV~l~g~~~~----~~ 523 (801)
..++|...+.||+|+||.||+|.+. |..||+|++.... ......+.+|+.++.++ +||||++++++|.. ..
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 3467888889999999999999874 7899999885432 23334577899999999 99999999998742 36
Q ss_pred ceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceee
Q 003703 524 SLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRL 603 (801)
Q Consensus 524 ~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~ 603 (801)
++||||++ ++|..++... .++|..+..++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||++..
T Consensus 85 ~lv~e~~~-~~L~~~~~~~----~~~~~~~~~i~~qi~~~L~~LH~~~---i~H~dl~p~nill~~~~~~kl~d~g~~~~ 156 (337)
T cd07852 85 YLVFEYME-TDLHAVIRAN----ILEDVHKRYIMYQLLKALKYIHSGN---VIHRDLKPSNILLNSDCRVKLADFGLARS 156 (337)
T ss_pred EEEecccc-cCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEEeeccchhc
Confidence 89999996 5888877542 5788999999999999999999987 99999999999999999999999999987
Q ss_pred ccCCCCcCCCccccCCCCCCCCCCCcccccc-CCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHH---Hhhc-Cc----
Q 003703 604 VTEDTLYLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRR---AVSC-GK---- 674 (801)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~-~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~---~~~~-g~---- 674 (801)
........ .........||+.|+|||++.+ ..++.++|||||||++|+|+||++||........ .... +.
T Consensus 157 ~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 235 (337)
T cd07852 157 LSELEENP-ENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAE 235 (337)
T ss_pred cccccccc-cCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHH
Confidence 65432110 0012234568999999998754 5678999999999999999999999964322111 0000 00
Q ss_pred ---------cccccC----CC---CCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHH
Q 003703 675 ---------LSSILD----PL---AGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVK 718 (801)
Q Consensus 675 ---------~~~~~d----~~---~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~ 718 (801)
...+++ .. ........+..+.+++.+||+.+|.+||++.+.+.+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 236 DIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred HHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 000010 00 011111245688999999999999999999966654
No 329
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-34 Score=298.35 Aligned_cols=238 Identities=28% Similarity=0.358 Sum_probs=198.3
Q ss_pred cCccccceeeecCceEEEEEEECC--eEEEEEEeccCCcccH---HHHHHHHHHHhcC-CCCceeeEecccc--CCccee
Q 003703 455 CNFSESFKVGQGGFGCVYKGEMLG--RTVAIKMLYSHNMQGQ---LEFQQEVRVLSKL-QHPHLVTLLGACP--EAWSLV 526 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~g--~~vAiK~l~~~~~~~~---~~f~~E~~il~~l-~HpnIV~l~g~~~--~~~~LV 526 (801)
.+|....+||+|+||.|.++...| ..+|||+++++..-.. +--..|-++|+.. +-|.+++|..+|+ +.+|+|
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFV 428 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFV 428 (683)
T ss_pred cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeE
Confidence 368888899999999999998875 5799999988754221 1234677788776 6788999998884 578999
Q ss_pred eecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccC
Q 003703 527 YEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTE 606 (801)
Q Consensus 527 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~ 606 (801)
|||+.||+|.-++..-+. +-.+.+..++.+||-||-|||+.+ ||.||||.+|||||.+|++||+|||+++.---
T Consensus 429 MEyvnGGDLMyhiQQ~Gk---FKEp~AvFYAaEiaigLFFLh~kg---IiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~ 502 (683)
T KOG0696|consen 429 MEYVNGGDLMYHIQQVGK---FKEPVAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIF 502 (683)
T ss_pred EEEecCchhhhHHHHhcc---cCCchhhhhhHHHHHHhhhhhcCC---eeeeeccccceEeccCCceEeeeccccccccc
Confidence 999999999999987654 445778889999999999999988 99999999999999999999999999986432
Q ss_pred CCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhH--HHHHhhcCccccccCCCCC
Q 003703 607 DTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILDPLAG 684 (801)
Q Consensus 607 ~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~--~~~~~~~g~~~~~~d~~~~ 684 (801)
+. ..+.+.+|||.|+|||++...+|+.++|+|||||+||||+.|++||...++ +..++.+.+.
T Consensus 503 ~~------~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnv--------- 567 (683)
T KOG0696|consen 503 DG------VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNV--------- 567 (683)
T ss_pred CC------cceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccC---------
Confidence 22 235678999999999999999999999999999999999999999986543 4455544332
Q ss_pred CCCHHHHHHHHHHHHHhhhhCCCCCCCch
Q 003703 685 DWPTFVARRLVDLGLQCCELYGRERPDIT 713 (801)
Q Consensus 685 ~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~ 713 (801)
.||...+.+...+....+..+|.+|--..
T Consensus 568 syPKslSkEAv~ickg~ltK~P~kRLGcg 596 (683)
T KOG0696|consen 568 SYPKSLSKEAVAICKGLLTKHPGKRLGCG 596 (683)
T ss_pred cCcccccHHHHHHHHHHhhcCCccccCCC
Confidence 57888899999999999999999996543
No 330
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=6.8e-33 Score=296.13 Aligned_cols=248 Identities=24% Similarity=0.356 Sum_probs=189.7
Q ss_pred ccccceeeecCceEEEEEEEC--CeEEEEEEeccCC--cccHHHHHHHHHHHhcCCCCceeeEeccccC----Ccceeee
Q 003703 457 FSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHN--MQGQLEFQQEVRVLSKLQHPHLVTLLGACPE----AWSLVYE 528 (801)
Q Consensus 457 f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~--~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~----~~~LV~E 528 (801)
|.....||.|+||.||+|... |..||+|++.... ......+.+|+.++.+++|||++++++++.+ ..++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 455678999999999999885 6899999998663 2334568899999999999999999999843 4789999
Q ss_pred cCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCC
Q 003703 529 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDT 608 (801)
Q Consensus 529 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~ 608 (801)
|++ ++|.+++.... ..+++..++.++.+|+.||.|||..+ ++|+||+|+||+++.++.+||+|||++.......
T Consensus 81 ~~~-~~l~~~~~~~~--~~~~~~~~~~i~~~i~~al~~LH~~~---~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~ 154 (287)
T cd07840 81 YMD-HDLTGLLDSPE--VKFTESQIKCYMKQLLEGLQYLHSNG---ILHRDIKGSNILINNDGVLKLADFGLARPYTKRN 154 (287)
T ss_pred ccc-ccHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEEcCCCCEEEccccceeeccCCC
Confidence 997 48888876543 46899999999999999999999987 9999999999999999999999999998765432
Q ss_pred CcCCCccccCCCCCCCCCCCcccccc-CCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHH--hhc--C-----ccccc
Q 003703 609 LYLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRA--VSC--G-----KLSSI 678 (801)
Q Consensus 609 ~~~~~~~~~~~~~Gt~~Y~APE~~~~-~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~--~~~--g-----~~~~~ 678 (801)
.. ......++..|+|||.+.+ ..++.++||||||+++|||+||+.||......... +.. + .+..+
T Consensus 155 ~~-----~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (287)
T cd07840 155 SA-----DYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGV 229 (287)
T ss_pred cc-----cccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhcccc
Confidence 10 1233457889999997754 46899999999999999999999999643321110 000 0 00000
Q ss_pred cC--------CC------CCC-CCHHHHHHHHHHHHHhhhhCCCCCCCchHH
Q 003703 679 LD--------PL------AGD-WPTFVARRLVDLGLQCCELYGRERPDITPS 715 (801)
Q Consensus 679 ~d--------~~------~~~-~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~ 715 (801)
.+ +. ..+ +...++..+.+++.+||+.+|.+||++.+.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~ 281 (287)
T cd07840 230 SKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQA 281 (287)
T ss_pred ccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 00 00 000 001126688999999999999999999843
No 331
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=3e-33 Score=307.50 Aligned_cols=256 Identities=20% Similarity=0.283 Sum_probs=194.5
Q ss_pred hcCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEecccc------CCc
Q 003703 454 TCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACP------EAW 523 (801)
Q Consensus 454 t~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~--~~~~~f~~E~~il~~l~HpnIV~l~g~~~------~~~ 523 (801)
..+|.....||.|+||.||+|... |..||+|++..... .....+.+|+.+|.+++||||++++++|. ...
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 367888889999999999999875 89999999875432 23456778999999999999999998873 236
Q ss_pred ceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceee
Q 003703 524 SLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRL 603 (801)
Q Consensus 524 ~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~ 603 (801)
++||||+. |+|.+++... ..+++..+..++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++.
T Consensus 84 ~lv~e~~~-~~l~~~~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~dfg~~~~ 156 (334)
T cd07855 84 YVVMDLME-SDLHHIIHSD---QPLTEEHIRYFLYQLLRGLKYIHSAN---VIHRDLKPSNLLVNEDCELRIGDFGMARG 156 (334)
T ss_pred EEEEehhh-hhHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEeccccccee
Confidence 89999995 6898887544 34899999999999999999999987 99999999999999999999999999987
Q ss_pred ccCCCCcCCCccccCCCCCCCCCCCcccccc-CCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHH-------------
Q 003703 604 VTEDTLYLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRA------------- 669 (801)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~-~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~------------- 669 (801)
....... .........|+..|+|||++.. ..++.++|||||||++|||++|++||...+.....
T Consensus 157 ~~~~~~~--~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~ 234 (334)
T cd07855 157 LSSSPTE--HKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEE 234 (334)
T ss_pred ecccCcC--CCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhH
Confidence 6443211 1111234578999999998765 46899999999999999999999999643221100
Q ss_pred ----hhcCccccccCC--C--CCCC---CHHHHHHHHHHHHHhhhhCCCCCCCchHHHHH
Q 003703 670 ----VSCGKLSSILDP--L--AGDW---PTFVARRLVDLGLQCCELYGRERPDITPSLVK 718 (801)
Q Consensus 670 ----~~~g~~~~~~d~--~--~~~~---~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~ 718 (801)
+..+.+....+. . ...| ....+..+.+++.+||+.+|.+||++.+.+.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 294 (334)
T cd07855 235 VLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH 294 (334)
T ss_pred hhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 000111111100 0 0011 12346789999999999999999999865543
No 332
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=6.8e-33 Score=300.98 Aligned_cols=250 Identities=24% Similarity=0.326 Sum_probs=190.8
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCccc--HHHHHHHHHHHhcCCCCceeeEeccccC----Cccee
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQG--QLEFQQEVRVLSKLQHPHLVTLLGACPE----AWSLV 526 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~--~~~f~~E~~il~~l~HpnIV~l~g~~~~----~~~LV 526 (801)
.+|...+.||.|+||.||+|... |..||+|.+....... ...+.+|+.++.+++|+||+++++++.+ ..++|
T Consensus 7 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 86 (309)
T cd07845 7 TEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFLV 86 (309)
T ss_pred cceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEEE
Confidence 57888889999999999999885 8899999986543221 2346689999999999999999998742 36899
Q ss_pred eecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccC
Q 003703 527 YEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTE 606 (801)
Q Consensus 527 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~ 606 (801)
|||+. ++|.+.+.... ..+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++.....
T Consensus 87 ~e~~~-~~l~~~l~~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~ 160 (309)
T cd07845 87 MEYCE-QDLASLLDNMP--TPFSESQVKCLMLQLLRGLQYLHENF---IIHRDLKVSNLLLTDKGCLKIADFGLARTYGL 160 (309)
T ss_pred EecCC-CCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECccceeeecCC
Confidence 99996 57888776543 46899999999999999999999988 99999999999999999999999999987654
Q ss_pred CCCcCCCccccCCCCCCCCCCCcccccc-CCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHH--hhc--C----ccc-
Q 003703 607 DTLYLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRA--VSC--G----KLS- 676 (801)
Q Consensus 607 ~~~~~~~~~~~~~~~Gt~~Y~APE~~~~-~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~--~~~--g----~~~- 676 (801)
... ......+++.|+|||++.+ ..++.++|||||||++|||++|++||......... +.. + ...
T Consensus 161 ~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (309)
T cd07845 161 PAK------PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWP 234 (309)
T ss_pred ccC------CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhch
Confidence 321 1223346888999998865 56899999999999999999999999644332111 100 0 000
Q ss_pred --------cccC-C-C-CCCCC---HHHHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 677 --------SILD-P-L-AGDWP---TFVARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 677 --------~~~d-~-~-~~~~~---~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
..+. + . ...+. ...+..+.+++.+|++.||.+||++.+.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il 288 (309)
T cd07845 235 GFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEAL 288 (309)
T ss_pred hhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHh
Confidence 0000 0 0 00000 11356788999999999999999998544
No 333
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=7.7e-33 Score=294.54 Aligned_cols=242 Identities=21% Similarity=0.307 Sum_probs=185.0
Q ss_pred HHHHHHHhcCcccccee--eecCceEEEEEEEC--CeEEEEEEeccCCcccHHHHHHHHHHHhcC-CCCceeeEecccc-
Q 003703 447 LADLQTATCNFSESFKV--GQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKL-QHPHLVTLLGACP- 520 (801)
Q Consensus 447 ~~el~~at~~f~~~~~L--G~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~~~~f~~E~~il~~l-~HpnIV~l~g~~~- 520 (801)
..++....++|...+.+ |.|+||.||++... +..+|+|.+........ |+.+...+ +||||++++++|.
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~~ 80 (267)
T PHA03390 6 LSELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVTT 80 (267)
T ss_pred HHHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEec
Confidence 34444455666666665 99999999999874 78899999865432211 22222222 7999999999883
Q ss_pred -CCcceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCC-Ceeeecc
Q 003703 521 -EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSEL-SSKICDF 598 (801)
Q Consensus 521 -~~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~-~vKL~DF 598 (801)
+..++||||+++|+|.+++.... .++|..+..++.|++.||.|||+.+ ++||||||+||+++.++ .++|+||
T Consensus 81 ~~~~~iv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~~l~df 154 (267)
T PHA03390 81 LKGHVLIMDYIKDGDLFDLLKKEG---KLSEAEVKKIIRQLVEALNDLHKHN---IIHNDIKLENVLYDRAKDRIYLCDY 154 (267)
T ss_pred CCeeEEEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEeCCCCeEEEecC
Confidence 45789999999999999986543 7899999999999999999999988 99999999999999998 9999999
Q ss_pred cceeeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhhcCccccc
Q 003703 599 GICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSI 678 (801)
Q Consensus 599 Gla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~g~~~~~ 678 (801)
|++...... ....|++.|+|||++.+..++.++|||||||++|+|++|+.||....... +....+...
T Consensus 155 g~~~~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~ 222 (267)
T PHA03390 155 GLCKIIGTP----------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEE--LDLESLLKR 222 (267)
T ss_pred ccceecCCC----------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcch--hhHHHHHHh
Confidence 998866432 23358999999999999899999999999999999999999996332110 000000000
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCc
Q 003703 679 LDPLAGDWPTFVARRLVDLGLQCCELYGRERPDI 712 (801)
Q Consensus 679 ~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~ 712 (801)
.. .....+...+..+.+++.+||+.+|.+||+.
T Consensus 223 ~~-~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~ 255 (267)
T PHA03390 223 QQ-KKLPFIKNVSKNANDFVQSMLKYNINYRLTN 255 (267)
T ss_pred hc-ccCCcccccCHHHHHHHHHHhccChhhCCch
Confidence 00 1112233466789999999999999999964
No 334
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=7.3e-33 Score=299.06 Aligned_cols=254 Identities=24% Similarity=0.332 Sum_probs=192.8
Q ss_pred HHhcCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEeccccC------
Q 003703 452 TATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACPE------ 521 (801)
Q Consensus 452 ~at~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~--~~~~~f~~E~~il~~l~HpnIV~l~g~~~~------ 521 (801)
...++|.....||+|+||.||+|... |..||+|++..... .....+.+|+.++..++||||+++++++.+
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 34567888899999999999999985 78999999875432 223457789999999999999999998743
Q ss_pred ------CcceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeee
Q 003703 522 ------AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKI 595 (801)
Q Consensus 522 ------~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL 595 (801)
..++|+||+++ +|.+.+... ...+++..+..|+.||+.||.|||+.+ |+|+||||+||+++.++.+||
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~~~~~~kl 157 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESG--LVHFSEDHIKSFMKQLLEGLNYCHKKN---FLHRDIKCSNILLNNKGQIKL 157 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCcEEe
Confidence 36799999976 676666543 246899999999999999999999987 999999999999999999999
Q ss_pred ecccceeeccCCCCcCCCccccCCCCCCCCCCCcccccc-CCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHH--hh-
Q 003703 596 CDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRA--VS- 671 (801)
Q Consensus 596 ~DFGla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~-~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~--~~- 671 (801)
+|||++........ .......+++.|+|||++.+ ..++.++|||||||++|+|++|++||......... +.
T Consensus 158 ~dfg~~~~~~~~~~-----~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~ 232 (302)
T cd07864 158 ADFGLARLYNSEES-----RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISR 232 (302)
T ss_pred CcccccccccCCcc-----cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Confidence 99999987654321 11223456888999998764 45789999999999999999999999754432211 00
Q ss_pred --cCc----cccc--------cCCCC------CCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 672 --CGK----LSSI--------LDPLA------GDWPTFVARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 672 --~g~----~~~~--------~d~~~------~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
.+. +..+ .++.. .......+..+.+++.+||+.+|.+||++.+.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il 297 (302)
T cd07864 233 LCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEAL 297 (302)
T ss_pred HhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHh
Confidence 000 0000 00000 000112356899999999999999999998433
No 335
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.9e-33 Score=325.44 Aligned_cols=256 Identities=16% Similarity=0.247 Sum_probs=180.3
Q ss_pred HhcCccccceeeecCceEEEEEEEC---CeEEEEEEe--------------cc---CCcccHHHHHHHHHHHhcCCCCce
Q 003703 453 ATCNFSESFKVGQGGFGCVYKGEML---GRTVAIKML--------------YS---HNMQGQLEFQQEVRVLSKLQHPHL 512 (801)
Q Consensus 453 at~~f~~~~~LG~G~fG~Vy~g~~~---g~~vAiK~l--------------~~---~~~~~~~~f~~E~~il~~l~HpnI 512 (801)
...+|.....||+|+||.||++.+. +..+++|.+ .+ ........|.+|+.+|.+++||||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 4578999999999999999998753 222222211 00 111223457899999999999999
Q ss_pred eeEecccc--CCcceeeecCCCCchhhhhhhcCC--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeec
Q 003703 513 VTLLGACP--EAWSLVYEYLPNGSLQDRLFRKSN--VSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLD 588 (801)
Q Consensus 513 V~l~g~~~--~~~~LV~E~~~~gsL~~~L~~~~~--~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd 588 (801)
|++++++. +..++|++++ +++|.+++..... ...........|+.||+.||.|||+.+ ||||||||+||||+
T Consensus 226 v~l~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~g---IiHrDLKP~NILl~ 301 (501)
T PHA03210 226 LKIEEILRSEANTYMITQKY-DFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKK---LIHRDIKLENIFLN 301 (501)
T ss_pred CcEeEEEEECCeeEEEEecc-ccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEC
Confidence 99999984 3578899998 4577776654321 122335667789999999999999987 99999999999999
Q ss_pred CCCCeeeecccceeeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCC-CCCCh----
Q 003703 589 SELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRL-PVGLA---- 663 (801)
Q Consensus 589 ~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~-Pf~~~---- 663 (801)
.++.+||+|||+++.+..... .......||+.|+|||++.+..++.++|||||||+||||++|.. ||...
T Consensus 302 ~~~~vkL~DFGla~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~ 376 (501)
T PHA03210 302 CDGKIVLGDFGTAMPFEKERE-----AFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKP 376 (501)
T ss_pred CCCCEEEEeCCCceecCcccc-----cccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCH
Confidence 999999999999987754321 12234679999999999999999999999999999999999875 44311
Q ss_pred -hHHHHHhhc-----Cccc-------cccCC-----CCCCCCH-----HHHHHHHHHHHHhhhhCCCCCCCchHHHH
Q 003703 664 -GEVRRAVSC-----GKLS-------SILDP-----LAGDWPT-----FVARRLVDLGLQCCELYGRERPDITPSLV 717 (801)
Q Consensus 664 -~~~~~~~~~-----g~~~-------~~~d~-----~~~~~~~-----~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~ 717 (801)
......+.. ..+. ..++. .....+. .....+.+++.+||+.||.+||++.+.+.
T Consensus 377 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~ 453 (501)
T PHA03210 377 GKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLA 453 (501)
T ss_pred HHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhh
Confidence 111111110 0000 00000 0000111 12345778899999999999999996553
No 336
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=4.7e-33 Score=291.73 Aligned_cols=244 Identities=26% Similarity=0.388 Sum_probs=199.4
Q ss_pred CccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEecccc--CCcceeeec
Q 003703 456 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEY 529 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~--~~~~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~LV~E~ 529 (801)
+|...+.||.|+||.||++... +..||+|++..... .....+.+|++++..++|||++++++.+. +..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 4677788999999999999986 89999999976544 34556889999999999999999998874 357899999
Q ss_pred CCCCchhhhhhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCC
Q 003703 530 LPNGSLQDRLFRKS-NVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDT 608 (801)
Q Consensus 530 ~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~ 608 (801)
+++++|.+++.... ....+++..+..|+.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~---~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 157 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRK---ILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV 157 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence 99999999887642 2357899999999999999999999987 9999999999999999999999999998765432
Q ss_pred CcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhH--HHHHhhcCccccccCCCCCCC
Q 003703 609 LYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILDPLAGDW 686 (801)
Q Consensus 609 ~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~--~~~~~~~g~~~~~~d~~~~~~ 686 (801)
. ......|++.|+|||.+....++.++||||||+++|+|++|+.||..... +......+.. ...
T Consensus 158 ~------~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~--------~~~ 223 (258)
T cd08215 158 D------LAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQY--------PPI 223 (258)
T ss_pred c------eecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCCC--------CCC
Confidence 1 12345689999999999888899999999999999999999999965432 1111112111 122
Q ss_pred CHHHHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 687 PTFVARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 687 ~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
+...+..+.+++.+||..+|.+||++.+.+
T Consensus 224 ~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll 253 (258)
T cd08215 224 PSQYSSELRNLVSSLLQKDPEERPSIAQIL 253 (258)
T ss_pred CCCCCHHHHHHHHHHcCCChhhCcCHHHHh
Confidence 223456789999999999999999998544
No 337
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=9.9e-33 Score=294.50 Aligned_cols=248 Identities=25% Similarity=0.303 Sum_probs=193.1
Q ss_pred ccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcc--cHHHHHHHHHHHhcCCCCceeeEeccccC--CcceeeecC
Q 003703 457 FSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ--GQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYL 530 (801)
Q Consensus 457 f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~--~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E~~ 530 (801)
|.....||.|++|.||+|... |..+++|.+...... ....+.+|+.++++++||||+++++++.. ..++||||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 445568999999999999874 889999998755433 34568889999999999999999998843 578999999
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCc
Q 003703 531 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLY 610 (801)
Q Consensus 531 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~ 610 (801)
++ +|.+.+.... ..+++..+..++.+++.||.|||..+ |+|+||||+||+++.++.+||+|||.+........
T Consensus 81 ~~-~l~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~- 153 (283)
T cd05118 81 DT-DLYKLIKDRQ--RGLPESLIKSYLYQLLQGLAFCHSHG---ILHRDLKPENLLINTEGVLKLADFGLARSFGSPVR- 153 (283)
T ss_pred CC-CHHHHHHhhc--ccCCHHHHHHHHHHHHHHHHHHHHCC---eeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcc-
Confidence 75 8888776643 46899999999999999999999988 99999999999999999999999999987754321
Q ss_pred CCCccccCCCCCCCCCCCccccccC-CCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhhc----Cc-----cccccC
Q 003703 611 LPSFHRSTAPKGSFPYADPEYHRTG-VLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSC----GK-----LSSILD 680 (801)
Q Consensus 611 ~~~~~~~~~~~Gt~~Y~APE~~~~~-~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~----g~-----~~~~~d 680 (801)
......++..|+|||.+.+. .++.++||||||+++|+|+||+.||...+........ +. +..+.+
T Consensus 154 -----~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (283)
T cd05118 154 -----PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTS 228 (283)
T ss_pred -----cccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchh
Confidence 12334688899999998776 7899999999999999999999999654432211100 00 000000
Q ss_pred --------------CCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 681 --------------PLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 681 --------------~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
..........+..+.+++.+||+.||.+||++.+.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll 278 (283)
T cd05118 229 LARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQAL 278 (283)
T ss_pred hhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHh
Confidence 000111223567899999999999999999998544
No 338
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-34 Score=317.71 Aligned_cols=195 Identities=32% Similarity=0.490 Sum_probs=170.7
Q ss_pred ccccceeeecCceEEEEEEEC--CeEEEEEEeccCC-cccHHHHHHHHHHHhcCCCCceeeEeccccC--------Ccce
Q 003703 457 FSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHN-MQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--------AWSL 525 (801)
Q Consensus 457 f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~-~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--------~~~L 525 (801)
+.....||+||||.||+|+++ |+.||||.++... ........+|+++|++++|||||++++.-.+ ...+
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl 94 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL 94 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence 344567999999999999975 9999999997754 3445567899999999999999999987533 3468
Q ss_pred eeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeec--CCC--Ceeeecccce
Q 003703 526 VYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLD--SEL--SSKICDFGIC 601 (801)
Q Consensus 526 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd--~~~--~vKL~DFGla 601 (801)
|||||.||||...|..-.+...|+..+.+.+..+++.||.|||.++ |+||||||.||++- .+| .-||+|||.|
T Consensus 95 vmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~---IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~A 171 (732)
T KOG4250|consen 95 VMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENG---IVHRDLKPGNIVLQIGEDGQSIYKLTDFGAA 171 (732)
T ss_pred EEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcC---ceeccCCCCcEEEeecCCCceEEeeeccccc
Confidence 9999999999999998888888999999999999999999999988 99999999999983 323 4799999999
Q ss_pred eeccCCCCcCCCccccCCCCCCCCCCCccccc-cCCCCcchhHHhHHHHHHHHHhCCCCCC
Q 003703 602 RLVTEDTLYLPSFHRSTAPKGSFPYADPEYHR-TGVLTPKSDSYSFGLIILQLLTGRLPVG 661 (801)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~-~~~~s~ksDVwSlGvvL~ELltG~~Pf~ 661 (801)
+.+.++. .....+||..|++||.+. .+.|+.-+|.|||||++|++.||..||.
T Consensus 172 rel~d~s-------~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~ 225 (732)
T KOG4250|consen 172 RELDDNS-------LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFI 225 (732)
T ss_pred ccCCCCC-------eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCC
Confidence 9987765 346789999999999988 4889999999999999999999999995
No 339
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=1.3e-32 Score=297.90 Aligned_cols=254 Identities=25% Similarity=0.369 Sum_probs=188.5
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcc--cHHHHHHHHHHHhcCCCCceeeEeccccC---------
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ--GQLEFQQEVRVLSKLQHPHLVTLLGACPE--------- 521 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~--~~~~f~~E~~il~~l~HpnIV~l~g~~~~--------- 521 (801)
++|....+||+|+||.||+|... +..||||.+...... ....+.+|+.++++++||||++++++|..
T Consensus 12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 91 (310)
T cd07865 12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYK 91 (310)
T ss_pred hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCC
Confidence 46888899999999999999885 889999988654322 22346689999999999999999998732
Q ss_pred -CcceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccc
Q 003703 522 -AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGI 600 (801)
Q Consensus 522 -~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGl 600 (801)
..++||||+. ++|.+.+.... ..+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.+||+|||+
T Consensus 92 ~~~~lv~e~~~-~~l~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~ 165 (310)
T cd07865 92 GSFYLVFEFCE-HDLAGLLSNKN--VKFTLSEIKKVMKMLLNGLYYIHRNK---ILHRDMKAANILITKDGILKLADFGL 165 (310)
T ss_pred ceEEEEEcCCC-cCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEECCCCcEEECcCCC
Confidence 2489999996 57887775433 35899999999999999999999987 99999999999999999999999999
Q ss_pred eeeccCCCCcCCCccccCCCCCCCCCCCccccccC-CCCcchhHHhHHHHHHHHHhCCCCCCChhHHHH--Hhh--cCcc
Q 003703 601 CRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTG-VLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRR--AVS--CGKL 675 (801)
Q Consensus 601 a~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~-~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~--~~~--~g~~ 675 (801)
+.......... ........++..|+|||++.+. .++.++||||||+++|||+||++||........ .+. .|.+
T Consensus 166 ~~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~ 243 (310)
T cd07865 166 ARAFSLSKNSK--PNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSI 243 (310)
T ss_pred cccccCCcccC--CCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence 98764332111 0112345678899999987654 478999999999999999999999964332111 000 0111
Q ss_pred cccc----------C----CCC--CC-----CCHHHHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 676 SSIL----------D----PLA--GD-----WPTFVARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 676 ~~~~----------d----~~~--~~-----~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
..-+ + +.. .. ++......+.+|+.+||..||.+||++.+.+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l 305 (310)
T cd07865 244 TPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTAL 305 (310)
T ss_pred ChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHh
Confidence 0000 0 000 00 0111234678999999999999999998543
No 340
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=7.4e-33 Score=291.74 Aligned_cols=243 Identities=28% Similarity=0.341 Sum_probs=192.5
Q ss_pred eeecCceEEEEEEEC--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEeccccC--CcceeeecCCCCch
Q 003703 463 VGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYLPNGSL 535 (801)
Q Consensus 463 LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~---~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E~~~~gsL 535 (801)
||.|+||.||++... |..||+|++..... .....+.+|+.++.+++||||+++++.+.. ..++||||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999986 89999999876544 334568899999999999999999988743 47899999999999
Q ss_pred hhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcC--CC
Q 003703 536 QDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYL--PS 613 (801)
Q Consensus 536 ~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~--~~ 613 (801)
.+++.+.. .+++..+..|+.||+.||.|||..+ ++|+||+|+||+++.++.++|+|||++.......... ..
T Consensus 81 ~~~l~~~~---~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 154 (265)
T cd05579 81 ASLLENVG---SLDEDVARIYIAEIVLALEYLHSNG---IIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDD 154 (265)
T ss_pred HHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHcC---eecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccc
Confidence 99987643 6889999999999999999999987 9999999999999999999999999987654321100 00
Q ss_pred ccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHH--HHHhhcCccccccCCCCCCCCHH--
Q 003703 614 FHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEV--RRAVSCGKLSSILDPLAGDWPTF-- 689 (801)
Q Consensus 614 ~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~--~~~~~~g~~~~~~d~~~~~~~~~-- 689 (801)
........++..|++||.+....++.++||||||+++|+|++|..||...... ...+..+.. .++..
T Consensus 155 ~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~---------~~~~~~~ 225 (265)
T cd05579 155 EKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKI---------EWPEDVE 225 (265)
T ss_pred cccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCc---------CCCcccc
Confidence 01223456888999999998888999999999999999999999999643321 122222211 12222
Q ss_pred HHHHHHHHHHHhhhhCCCCCCCchHHHHHHHH
Q 003703 690 VARRLVDLGLQCCELYGRERPDITPSLVKELE 721 (801)
Q Consensus 690 ~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~ 721 (801)
.+..+.+++.+||+.+|.+||++. .+.+.|+
T Consensus 226 ~~~~~~~~i~~~l~~~p~~Rpt~~-~~~~~l~ 256 (265)
T cd05579 226 VSDEAIDLISKLLVPDPEKRLGAK-SIEEIKN 256 (265)
T ss_pred CCHHHHHHHHHHhcCCHhhcCCCc-cHHHHhc
Confidence 267889999999999999999995 3444443
No 341
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=3.9e-33 Score=311.44 Aligned_cols=252 Identities=26% Similarity=0.318 Sum_probs=194.6
Q ss_pred CccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcccHHHHHHHHHHHhcCC-C-----CceeeEeccc--cCCcce
Q 003703 456 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQ-H-----PHLVTLLGAC--PEAWSL 525 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~-H-----pnIV~l~g~~--~~~~~L 525 (801)
+|...+.||+|.||.|-++.+. ++.||||++++...-. .+-..|+.+|..|+ | -|+|+++++| .+..||
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~-~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci 265 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFL-RQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI 265 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHH-HHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence 7788899999999999999875 8899999998754322 23456999999996 4 3899999998 467899
Q ss_pred eeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCC--CCeeeecccceee
Q 003703 526 VYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSE--LSSKICDFGICRL 603 (801)
Q Consensus 526 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~--~~vKL~DFGla~~ 603 (801)
|+|.+ ..+|.++|..+. +..|+...+..|+.||+.||.+||..+ |||+||||+||||..- ..+||+|||.+..
T Consensus 266 VfELL-~~NLYellK~n~-f~Glsl~~ir~~~~Qil~~L~~L~~l~---IIHcDLKPENILL~~~~r~~vKVIDFGSSc~ 340 (586)
T KOG0667|consen 266 VFELL-STNLYELLKNNK-FRGLSLPLVRKFAQQILTALLFLHELG---IIHCDLKPENILLKDPKRSRIKVIDFGSSCF 340 (586)
T ss_pred eehhh-hhhHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCChhheeeccCCcCceeEEecccccc
Confidence 99998 779999997654 567999999999999999999999988 9999999999999653 4699999999987
Q ss_pred ccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHH--------------H
Q 003703 604 VTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRR--------------A 669 (801)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~--------------~ 669 (801)
..... ....-+-.|.|||++.+.+|+.+.||||||||+.||+||.+.|...++..+ +
T Consensus 341 ~~q~v---------ytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~m 411 (586)
T KOG0667|consen 341 ESQRV---------YTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKM 411 (586)
T ss_pred cCCcc---------eeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHH
Confidence 65432 133456679999999999999999999999999999999888853332111 0
Q ss_pred hhcC-ccccccC------------------------------------C-CCCC----CCHHHHHHHHHHHHHhhhhCCC
Q 003703 670 VSCG-KLSSILD------------------------------------P-LAGD----WPTFVARRLVDLGLQCCELYGR 707 (801)
Q Consensus 670 ~~~g-~~~~~~d------------------------------------~-~~~~----~~~~~~~~l~~Li~~Cl~~dP~ 707 (801)
+..+ +....++ | .... .+......+++++.+|+.+||.
T Consensus 412 L~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~ 491 (586)
T KOG0667|consen 412 LDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPA 491 (586)
T ss_pred HHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCch
Confidence 1000 0000000 1 0001 1113345789999999999999
Q ss_pred CCCCchHHHHHHHHH
Q 003703 708 ERPDITPSLVKELEQ 722 (801)
Q Consensus 708 ~RPt~~e~l~~~L~~ 722 (801)
.|+|..+.+.+.+-.
T Consensus 492 ~R~tp~qal~Hpfl~ 506 (586)
T KOG0667|consen 492 ERITPAQALNHPFLT 506 (586)
T ss_pred hcCCHHHHhcCcccc
Confidence 999999877666544
No 342
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=5.7e-33 Score=295.64 Aligned_cols=245 Identities=29% Similarity=0.384 Sum_probs=197.4
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCC-CCceeeEeccccC--Cccee
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQ-HPHLVTLLGACPE--AWSLV 526 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~---~~~~~f~~E~~il~~l~-HpnIV~l~g~~~~--~~~LV 526 (801)
++|.....||.|+||.||+|... |..||+|++..... .....+.+|+.++.+++ ||||+++++++.+ ..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 36778889999999999999884 89999999876432 23456889999999998 9999999998843 57899
Q ss_pred eecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccC
Q 003703 527 YEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTE 606 (801)
Q Consensus 527 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~ 606 (801)
|||+++++|.+++.... .+++..++.|+.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.....
T Consensus 81 ~e~~~~~~L~~~l~~~~---~l~~~~~~~i~~ql~~~l~~Lh~~~---~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~ 154 (280)
T cd05581 81 LEYAPNGELLQYIRKYG---SLDEKCTRFYAAEILLALEYLHSKG---IIHRDLKPENILLDKDMHIKITDFGTAKVLDP 154 (280)
T ss_pred EcCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEecCCccccccCC
Confidence 99999999999987643 6899999999999999999999987 99999999999999999999999999987654
Q ss_pred CCCcCC--------------CccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhhc
Q 003703 607 DTLYLP--------------SFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSC 672 (801)
Q Consensus 607 ~~~~~~--------------~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~ 672 (801)
...... .........|+..|++||++....++.++||||||+++++|++|+.||............
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~ 234 (280)
T cd05581 155 NSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKI 234 (280)
T ss_pred ccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHH
Confidence 321100 011233456889999999998888999999999999999999999999755432211100
Q ss_pred CccccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCc
Q 003703 673 GKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDI 712 (801)
Q Consensus 673 g~~~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~ 712 (801)
. .....++...+..+.+++.+||+.+|.+||++
T Consensus 235 ------~-~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~ 267 (280)
T cd05581 235 ------L-KLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGV 267 (280)
T ss_pred ------H-hcCCCCCCccCHHHHHHHHHHhcCCHhhCCCc
Confidence 0 01112334456789999999999999999999
No 343
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=3.9e-33 Score=307.10 Aligned_cols=252 Identities=22% Similarity=0.283 Sum_probs=193.3
Q ss_pred hcCccccceeeecCceEEEEEEEC--CeEEEEEEeccCC--cccHHHHHHHHHHHhcCCCCceeeEeccccC-------C
Q 003703 454 TCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHN--MQGQLEFQQEVRVLSKLQHPHLVTLLGACPE-------A 522 (801)
Q Consensus 454 t~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~--~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~-------~ 522 (801)
.++|.....||+|+||.||+|... |..||||.+.... ......+.+|+.++..++||||+++++++.. .
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 457888899999999999999875 8899999986532 2234457789999999999999999998742 2
Q ss_pred cceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeeccccee
Q 003703 523 WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR 602 (801)
Q Consensus 523 ~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~ 602 (801)
.++||||+. ++|.+++... ..+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~ 156 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRSS---QTLSDDHCQYFLYQLLRGLKYIHSAN---VLHRDLKPSNLLLNANCDLKICDFGLAR 156 (337)
T ss_pred EEEEEeCCC-CCHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEECcCcccc
Confidence 689999995 6888877543 35889999999999999999999987 9999999999999999999999999998
Q ss_pred eccCCCCcCCCccccCCCCCCCCCCCcccccc-CCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHH-------------
Q 003703 603 LVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRR------------- 668 (801)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~-~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~------------- 668 (801)
....... ......||..|+|||++.. ..++.++|||||||++|+|++|++||...+....
T Consensus 157 ~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 230 (337)
T cd07858 157 TTSEKGD------FMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSE 230 (337)
T ss_pred ccCCCcc------cccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCh
Confidence 7643321 1234468899999998764 4689999999999999999999999964322110
Q ss_pred ----HhhcCcccccc-------CCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHH
Q 003703 669 ----AVSCGKLSSIL-------DPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVK 718 (801)
Q Consensus 669 ----~~~~g~~~~~~-------d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~ 718 (801)
.+..+.....+ ++.........+..+.+|+.+||+.+|.+||++.+.+.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h 291 (337)
T cd07858 231 EDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAH 291 (337)
T ss_pred HHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcC
Confidence 00000000000 000011112356678999999999999999999865544
No 344
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=7e-33 Score=296.13 Aligned_cols=248 Identities=25% Similarity=0.340 Sum_probs=189.1
Q ss_pred ccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcc-cHHHHHHHHHHHhcCC-CCceeeEeccccC--CcceeeecC
Q 003703 457 FSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ-GQLEFQQEVRVLSKLQ-HPHLVTLLGACPE--AWSLVYEYL 530 (801)
Q Consensus 457 f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~-~~~~f~~E~~il~~l~-HpnIV~l~g~~~~--~~~LV~E~~ 530 (801)
|...+.||.|+||.||+|... +..||||++...... ......+|+..+.+++ ||||++++++|.+ ..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 456678999999999999985 788999998654332 2234567999999999 9999999999843 578999999
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCc
Q 003703 531 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLY 610 (801)
Q Consensus 531 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~ 610 (801)
+|+|.+.+.... ...+++..+..++.|++.+|.|||+.+ ++|+||+|+||+++.++.++|+|||++........
T Consensus 81 -~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~Lh~~~---i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~- 154 (283)
T cd07830 81 -EGNLYQLMKDRK-GKPFSESVIRSIIYQILQGLAHIHKHG---FFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPP- 154 (283)
T ss_pred -CCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCCEEEeecccceeccCCCC-
Confidence 889998886654 246899999999999999999999987 99999999999999999999999999987643221
Q ss_pred CCCccccCCCCCCCCCCCccccc-cCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhhc-----------------
Q 003703 611 LPSFHRSTAPKGSFPYADPEYHR-TGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSC----------------- 672 (801)
Q Consensus 611 ~~~~~~~~~~~Gt~~Y~APE~~~-~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~----------------- 672 (801)
.....|+..|+|||++. ...++.++||||||+++|+|++|++||............
T Consensus 155 ------~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (283)
T cd07830 155 ------YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYK 228 (283)
T ss_pred ------cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhh
Confidence 13346889999999874 456899999999999999999999999643322111100
Q ss_pred --CccccccCCC----CCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 673 --GKLSSILDPL----AGDWPTFVARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 673 --g~~~~~~d~~----~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
..+...+... ...+.......+.+++.+||+.+|.+||++.+.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~ 278 (283)
T cd07830 229 LASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQAL 278 (283)
T ss_pred hhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHh
Confidence 0000000000 0111111246799999999999999999998543
No 345
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=1.2e-32 Score=289.21 Aligned_cols=242 Identities=27% Similarity=0.405 Sum_probs=197.9
Q ss_pred CccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEeccccC--Ccceeeec
Q 003703 456 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEY 529 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~--~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E~ 529 (801)
+|...+.||.|+||.||++... +..+|+|.+..... .....+.+|+.+++.++||||+++++++.+ ..++||||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 4677788999999999999774 78999999876433 234467889999999999999999988743 47899999
Q ss_pred CCCCchhhhhhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCC
Q 003703 530 LPNGSLQDRLFRKS-NVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDT 608 (801)
Q Consensus 530 ~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~ 608 (801)
+++++|.+++.... ....+++..++.++.+++.||.|||+.+ ++|+||+|+||+++.++.+||+|||++.......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~---i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~ 157 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQK---ILHRDLKSANILLVANDLVKIGDLGISKVLKKNM 157 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEEecCCcEEEeeccchhhhccCC
Confidence 99999999886632 2346899999999999999999999988 9999999999999999999999999998765431
Q ss_pred CcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhH--HHHHhhcCccccccCCCCCCC
Q 003703 609 LYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILDPLAGDW 686 (801)
Q Consensus 609 ~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~--~~~~~~~g~~~~~~d~~~~~~ 686 (801)
.....|++.|++||++.+..++.++|+||||+++|+|++|+.||...+. ....+..+.+ ...
T Consensus 158 --------~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~--------~~~ 221 (256)
T cd08530 158 --------AKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKY--------PPI 221 (256)
T ss_pred --------cccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC--------CCC
Confidence 1234588999999999988999999999999999999999999975443 2222222222 122
Q ss_pred CHHHHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 687 PTFVARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 687 ~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
+...+..+.+++.+||+.+|.+||++.+.+
T Consensus 222 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l 251 (256)
T cd08530 222 PPIYSQDLQNFIRSMLQVKPKLRPNCDKIL 251 (256)
T ss_pred chhhCHHHHHHHHHHcCCCcccCCCHHHHh
Confidence 334667899999999999999999998543
No 346
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=6e-33 Score=298.33 Aligned_cols=241 Identities=27% Similarity=0.357 Sum_probs=188.9
Q ss_pred CccccceeeecCceEEEEEEE-----CCeEEEEEEeccCCc----ccHHHHHHHHHHHhcC-CCCceeeEeccccC--Cc
Q 003703 456 NFSESFKVGQGGFGCVYKGEM-----LGRTVAIKMLYSHNM----QGQLEFQQEVRVLSKL-QHPHLVTLLGACPE--AW 523 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~-----~g~~vAiK~l~~~~~----~~~~~f~~E~~il~~l-~HpnIV~l~g~~~~--~~ 523 (801)
+|.....||.|+||.||++.. .|..||+|++..... .....+.+|+.++.++ +||||+++++++.. ..
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 466778899999999999976 478999999875432 2235678899999999 59999999988854 46
Q ss_pred ceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceee
Q 003703 524 SLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRL 603 (801)
Q Consensus 524 ~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~ 603 (801)
++||||+++++|.+++... ..+++..+..++.|++.||.|||+.+ ++||||+|+|||++.++.+||+|||++..
T Consensus 81 ~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~ 154 (290)
T cd05613 81 HLILDYINGGELFTHLSQR---ERFKEQEVQIYSGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKE 154 (290)
T ss_pred EEEEecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEECCCCCEEEeeCcccee
Confidence 7999999999999998754 35788999999999999999999987 99999999999999999999999999987
Q ss_pred ccCCCCcCCCccccCCCCCCCCCCCcccccc--CCCCcchhHHhHHHHHHHHHhCCCCCCChhHH--HHHhhcCcccccc
Q 003703 604 VTEDTLYLPSFHRSTAPKGSFPYADPEYHRT--GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEV--RRAVSCGKLSSIL 679 (801)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~--~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~--~~~~~~g~~~~~~ 679 (801)
....... ......|+..|+|||++.. ..++.++||||||+++|+|+||..||...... ...+.. .+
T Consensus 155 ~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~-----~~ 224 (290)
T cd05613 155 FHEDEVE-----RAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISR-----RI 224 (290)
T ss_pred ccccccc-----ccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHH-----Hh
Confidence 6433211 1234568999999998865 34788999999999999999999999632210 000100 00
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCc
Q 003703 680 DPLAGDWPTFVARRLVDLGLQCCELYGRERPDI 712 (801)
Q Consensus 680 d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~ 712 (801)
......++......+.+++.+||+.+|.+||+.
T Consensus 225 ~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~ 257 (290)
T cd05613 225 LKSEPPYPQEMSALAKDIIQRLLMKDPKKRLGC 257 (290)
T ss_pred hccCCCCCccCCHHHHHHHHHHhcCCHHHhcCC
Confidence 011122344456788999999999999999854
No 347
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-34 Score=308.28 Aligned_cols=233 Identities=23% Similarity=0.312 Sum_probs=201.5
Q ss_pred cceeeecCceEEEEEEECCeE--EEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEeccccC--CcceeeecCCC
Q 003703 460 SFKVGQGGFGCVYKGEMLGRT--VAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYLPN 532 (801)
Q Consensus 460 ~~~LG~G~fG~Vy~g~~~g~~--vAiK~l~~~~~---~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E~~~~ 532 (801)
...||-||||.|-+++..+.. +|+|++++... ..+..+..|-.||...+.|.||+||..|.+ +.|++||-|-|
T Consensus 425 iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEaClG 504 (732)
T KOG0614|consen 425 IATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEACLG 504 (732)
T ss_pred hhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHHhhcC
Confidence 345999999999999887655 89999987654 334568899999999999999999999855 57899999999
Q ss_pred CchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCC
Q 003703 533 GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLP 612 (801)
Q Consensus 533 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~ 612 (801)
|.|+..|..++ .|+..+...++..+..|+.|||..+ ||.|||||+|++||.+|-+||.|||+|+.+..+.
T Consensus 505 GElWTiLrdRg---~Fdd~tarF~~acv~EAfeYLH~k~---iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~---- 574 (732)
T KOG0614|consen 505 GELWTILRDRG---SFDDYTARFYVACVLEAFEYLHRKG---IIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGR---- 574 (732)
T ss_pred chhhhhhhhcC---CcccchhhhhHHHHHHHHHHHHhcC---ceeccCChhheeeccCCceEEeehhhHHHhccCC----
Confidence 99999998775 4666778889999999999999988 9999999999999999999999999999987654
Q ss_pred CccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHH--HhhcCccccccCCCCCCCCHHH
Q 003703 613 SFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRR--AVSCGKLSSILDPLAGDWPTFV 690 (801)
Q Consensus 613 ~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~--~~~~g~~~~~~d~~~~~~~~~~ 690 (801)
++.+.+|||.|+|||++.+.+.+.++|.||||+++||||||.+||...+.+.. ++-.| +| .-.||..+
T Consensus 575 ---KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkG-----id--~i~~Pr~I 644 (732)
T KOG0614|consen 575 ---KTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKG-----ID--KIEFPRRI 644 (732)
T ss_pred ---ceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhh-----hh--hhhccccc
Confidence 56788999999999999999999999999999999999999999998876543 33333 11 23678888
Q ss_pred HHHHHHHHHHhhhhCCCCCCCc
Q 003703 691 ARRLVDLGLQCCELYGRERPDI 712 (801)
Q Consensus 691 ~~~l~~Li~~Cl~~dP~~RPt~ 712 (801)
.....+|+.+.|..+|.+|--.
T Consensus 645 ~k~a~~Lik~LCr~~P~ERLG~ 666 (732)
T KOG0614|consen 645 TKTATDLIKKLCRDNPTERLGY 666 (732)
T ss_pred chhHHHHHHHHHhcCcHhhhcc
Confidence 8899999999999999999873
No 348
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=9.1e-33 Score=305.28 Aligned_cols=257 Identities=23% Similarity=0.257 Sum_probs=195.9
Q ss_pred cCHHHHHHHhcCccccceeeecCceEEEEEEEC--CeEEEEEEeccCC--cccHHHHHHHHHHHhcCCCCceeeEecccc
Q 003703 445 FSLADLQTATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHN--MQGQLEFQQEVRVLSKLQHPHLVTLLGACP 520 (801)
Q Consensus 445 ~~~~el~~at~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~--~~~~~~f~~E~~il~~l~HpnIV~l~g~~~ 520 (801)
....++..++++|.....||+|+||.||+|... |..||+|++.... ......+.+|+.++.+++||||+++++++.
T Consensus 7 ~~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~ 86 (345)
T cd07877 7 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT 86 (345)
T ss_pred hHHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeee
Confidence 445677888899999999999999999999864 8899999986532 223346788999999999999999998873
Q ss_pred C--------CcceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCC
Q 003703 521 E--------AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELS 592 (801)
Q Consensus 521 ~--------~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~ 592 (801)
. ..+++++++ +++|.+++.. ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.
T Consensus 87 ~~~~~~~~~~~~lv~~~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~ 158 (345)
T cd07877 87 PARSLEEFNDVYLVTHLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCE 158 (345)
T ss_pred ecccccccccEEEEehhc-ccCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChHHEEEcCCCC
Confidence 2 246777776 8899887753 24889999999999999999999988 999999999999999999
Q ss_pred eeeecccceeeccCCCCcCCCccccCCCCCCCCCCCcccccc-CCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHH---
Q 003703 593 SKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRR--- 668 (801)
Q Consensus 593 vKL~DFGla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~-~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~--- 668 (801)
+||+|||+++..... .....||+.|+|||++.+ ..++.++|||||||++|+|++|++||........
T Consensus 159 ~kl~dfg~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~ 229 (345)
T cd07877 159 LKILDFGLARHTDDE---------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 229 (345)
T ss_pred EEEeccccccccccc---------ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 999999998764321 234468899999998765 5688999999999999999999999964322111
Q ss_pred Hhh-cCc-c-------------------ccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHH
Q 003703 669 AVS-CGK-L-------------------SSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVK 718 (801)
Q Consensus 669 ~~~-~g~-~-------------------~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~ 718 (801)
... .+. . .........+.....+..+.+++.+|++.||.+||+..+.+.+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 230 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred HHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 000 000 0 0000000000011134578899999999999999999855543
No 349
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=8.2e-33 Score=299.51 Aligned_cols=257 Identities=25% Similarity=0.334 Sum_probs=190.4
Q ss_pred hcCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCccc--HHHHHHHHHHHhcCCCCceeeEeccccC--------
Q 003703 454 TCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQG--QLEFQQEVRVLSKLQHPHLVTLLGACPE-------- 521 (801)
Q Consensus 454 t~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~--~~~f~~E~~il~~l~HpnIV~l~g~~~~-------- 521 (801)
.++|....+||.|+||.||+|... +..||||++....... ...+.+|+.++..++||||+++++++.+
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 468899999999999999999885 7899999986543322 2357789999999999999999987622
Q ss_pred --CcceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeeccc
Q 003703 522 --AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFG 599 (801)
Q Consensus 522 --~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFG 599 (801)
..++||+|+.+ +|...+.... ..+++..+..++.|++.||.|||+.+ |+|+||||+|||++.++.+||+|||
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~~~--~~~~~~~~~~i~~~l~~al~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg 160 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLENPS--VKLTESQIKCYMLQLLEGINYLHENH---ILHRDIKAANILIDNQGILKIADFG 160 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhccc--cCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECcCc
Confidence 24799999964 6766665432 46899999999999999999999988 9999999999999999999999999
Q ss_pred ceeeccCCCCcCC-----CccccCCCCCCCCCCCcccccc-CCCCcchhHHhHHHHHHHHHhCCCCCCChhHHH---HHh
Q 003703 600 ICRLVTEDTLYLP-----SFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVR---RAV 670 (801)
Q Consensus 600 la~~~~~~~~~~~-----~~~~~~~~~Gt~~Y~APE~~~~-~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~---~~~ 670 (801)
+++.......... .....+...|++.|+|||++.+ ..++.++|||||||++|||++|++||....... ..+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~ 240 (311)
T cd07866 161 LARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIF 240 (311)
T ss_pred cchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 9986643322111 1112234567899999998765 458999999999999999999999996433211 101
Q ss_pred hc-C-----------ccccccC-CCCCCCC-------HHHHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 671 SC-G-----------KLSSILD-PLAGDWP-------TFVARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 671 ~~-g-----------~~~~~~d-~~~~~~~-------~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
.. + .+....+ ......+ ......+.+++.+||+.+|.+|||+.+.+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell 306 (311)
T cd07866 241 KLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDAL 306 (311)
T ss_pred HHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHh
Confidence 00 0 0000000 0000111 11235788999999999999999987433
No 350
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=2.7e-32 Score=291.78 Aligned_cols=248 Identities=27% Similarity=0.385 Sum_probs=188.6
Q ss_pred ccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcc--cHHHHHHHHHHHhcC---CCCceeeEecccc--CC-----
Q 003703 457 FSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ--GQLEFQQEVRVLSKL---QHPHLVTLLGACP--EA----- 522 (801)
Q Consensus 457 f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~--~~~~f~~E~~il~~l---~HpnIV~l~g~~~--~~----- 522 (801)
|.....||.|+||.||+|... +..||+|++...... ....+.+|+.++.++ +||||++++++|. +.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 456678999999999999985 789999999754322 123466788777666 6999999999984 23
Q ss_pred cceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeeccccee
Q 003703 523 WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR 602 (801)
Q Consensus 523 ~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~ 602 (801)
.+++|||++ ++|.+++..... ..+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.+||+|||++.
T Consensus 81 ~~l~~e~~~-~~l~~~l~~~~~-~~l~~~~~~~~~~~i~~al~~LH~~~---i~h~~l~~~nili~~~~~~~l~dfg~~~ 155 (287)
T cd07838 81 LTLVFEHVD-QDLATYLSKCPK-PGLPPETIKDLMRQLLRGVDFLHSHR---IVHRDLKPQNILVTSDGQVKIADFGLAR 155 (287)
T ss_pred eEEEehhcc-cCHHHHHHHccC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhEEEccCCCEEEeccCcce
Confidence 679999996 588888865432 35899999999999999999999987 9999999999999999999999999998
Q ss_pred eccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHH---HHhhc----Ccc
Q 003703 603 LVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVR---RAVSC----GKL 675 (801)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~---~~~~~----g~~ 675 (801)
....... .....+++.|+|||++.+..++.++|||||||++|+|++|++||....... ..... +..
T Consensus 156 ~~~~~~~-------~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (287)
T cd07838 156 IYSFEMA-------LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEE 228 (287)
T ss_pred eccCCcc-------cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChH
Confidence 7644321 123357899999999998899999999999999999999999996433211 11110 000
Q ss_pred --c-------cccCCC----CCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 676 --S-------SILDPL----AGDWPTFVARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 676 --~-------~~~d~~----~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
. ..+... ........+..+.+++.+||+.||.+||++.+.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il 282 (287)
T cd07838 229 EWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEAL 282 (287)
T ss_pred hcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHh
Confidence 0 000000 0111123456789999999999999999998544
No 351
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=8.3e-33 Score=305.17 Aligned_cols=246 Identities=26% Similarity=0.318 Sum_probs=187.1
Q ss_pred hcCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEeccccC--------
Q 003703 454 TCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACPE-------- 521 (801)
Q Consensus 454 t~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~--~~~~~f~~E~~il~~l~HpnIV~l~g~~~~-------- 521 (801)
.++|.....||+|+||.||+|... |..||||++..... .....+.+|+.++..++||||++++++|..
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 378888899999999999999874 88999999865322 223457899999999999999999998742
Q ss_pred CcceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccce
Q 003703 522 AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGIC 601 (801)
Q Consensus 522 ~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla 601 (801)
..++|+||+. ++|..++. ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 94 ~~~lv~e~~~-~~l~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~---i~H~dlkp~NIll~~~~~~kL~dfg~~ 164 (342)
T cd07879 94 DFYLVMPYMQ-TDLQKIMG-----HPLSEDKVQYLVYQMLCGLKYIHSAG---IIHRDLKPGNLAVNEDCELKILDFGLA 164 (342)
T ss_pred eEEEEecccc-cCHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCCCC
Confidence 2479999995 46766541 35889999999999999999999987 999999999999999999999999998
Q ss_pred eeccCCCCcCCCccccCCCCCCCCCCCcccccc-CCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHH---HhhcC----
Q 003703 602 RLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRR---AVSCG---- 673 (801)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~-~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~---~~~~g---- 673 (801)
+..... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||...+.... .+...
T Consensus 165 ~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 235 (342)
T cd07879 165 RHADAE---------MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPG 235 (342)
T ss_pred cCCCCC---------CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence 764321 134467899999998866 4689999999999999999999999975332111 11100
Q ss_pred ----------ccccccC--CC--CCCC---CHHHHHHHHHHHHHhhhhCCCCCCCchHHHH
Q 003703 674 ----------KLSSILD--PL--AGDW---PTFVARRLVDLGLQCCELYGRERPDITPSLV 717 (801)
Q Consensus 674 ----------~~~~~~d--~~--~~~~---~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~ 717 (801)
.....+. +. ...+ ....+..+.+|+.+||+.||.+||++.+.+.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~ 296 (342)
T cd07879 236 PEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALE 296 (342)
T ss_pred HHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 0000000 00 0000 0123457889999999999999999985543
No 352
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=1.9e-32 Score=289.20 Aligned_cols=232 Identities=25% Similarity=0.292 Sum_probs=182.7
Q ss_pred ceeeecCceEEEEEEEC--CeEEEEEEeccCCccc---HHHHHHHHHHH-hcCCCCceeeEeccccC--CcceeeecCCC
Q 003703 461 FKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQG---QLEFQQEVRVL-SKLQHPHLVTLLGACPE--AWSLVYEYLPN 532 (801)
Q Consensus 461 ~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~---~~~f~~E~~il-~~l~HpnIV~l~g~~~~--~~~LV~E~~~~ 532 (801)
+.||.|+||.||+|... |+.||+|++....... ...+..|..++ ...+|||++++++++.. ..++||||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 35899999999999884 7899999986543322 12344555544 45589999999999854 57899999999
Q ss_pred CchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCC
Q 003703 533 GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLP 612 (801)
Q Consensus 533 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~ 612 (801)
++|.+++.... .+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.+||+|||+++....
T Consensus 82 ~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~------ 149 (260)
T cd05611 82 GDCASLIKTLG---GLPEDWAKQYIAEVVLGVEDLHQRG---IIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE------ 149 (260)
T ss_pred CCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCcEEEeecccceeccc------
Confidence 99999886543 5788999999999999999999987 99999999999999999999999999876432
Q ss_pred CccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhH--HHHHhhcCccccccCCCCCCCCHHH
Q 003703 613 SFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWPTFV 690 (801)
Q Consensus 613 ~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~--~~~~~~~g~~~~~~d~~~~~~~~~~ 690 (801)
.....|++.|++||.+.+..++.++||||||+++|+|+||..||..... +...+..+.... ........
T Consensus 150 ----~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 220 (260)
T cd05611 150 ----NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINW-----PEEVKEFC 220 (260)
T ss_pred ----cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCC-----CCcccccC
Confidence 1234688999999999888899999999999999999999999964332 222222222110 00111234
Q ss_pred HHHHHHHHHHhhhhCCCCCCCch
Q 003703 691 ARRLVDLGLQCCELYGRERPDIT 713 (801)
Q Consensus 691 ~~~l~~Li~~Cl~~dP~~RPt~~ 713 (801)
+..+.+++.+||+.+|.+||+..
T Consensus 221 ~~~~~~~i~~~l~~~p~~R~~~~ 243 (260)
T cd05611 221 SPEAVDLINRLLCMDPAKRLGAN 243 (260)
T ss_pred CHHHHHHHHHHccCCHHHccCCC
Confidence 56889999999999999999876
No 353
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=1.3e-32 Score=303.74 Aligned_cols=250 Identities=22% Similarity=0.278 Sum_probs=192.0
Q ss_pred HHHhcCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEeccccC-----
Q 003703 451 QTATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACPE----- 521 (801)
Q Consensus 451 ~~at~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~--~~~~~f~~E~~il~~l~HpnIV~l~g~~~~----- 521 (801)
....++|...+.||+|+||.||++... |..||||++..... .....+.+|+.+|.+++||||+++++++..
T Consensus 11 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07880 11 WEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLD 90 (343)
T ss_pred hccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccc
Confidence 345678999999999999999999874 88999999864322 223457899999999999999999998742
Q ss_pred ---CcceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecc
Q 003703 522 ---AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDF 598 (801)
Q Consensus 522 ---~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DF 598 (801)
..++||+|+ +++|.+++.. ..+++..+..++.||+.||.|||+.+ |+||||||+||+++.++.+||+||
T Consensus 91 ~~~~~~lv~e~~-~~~l~~~~~~----~~l~~~~~~~i~~qi~~al~~LH~~g---i~H~dlkp~Nill~~~~~~kl~df 162 (343)
T cd07880 91 RFHDFYLVMPFM-GTDLGKLMKH----EKLSEDRIQFLVYQMLKGLKYIHAAG---IIHRDLKPGNLAVNEDCELKILDF 162 (343)
T ss_pred ccceEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeec
Confidence 247999999 7899887753 35889999999999999999999987 999999999999999999999999
Q ss_pred cceeeccCCCCcCCCccccCCCCCCCCCCCcccccc-CCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHH---hhc-C
Q 003703 599 GICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRA---VSC-G 673 (801)
Q Consensus 599 Gla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~-~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~---~~~-g 673 (801)
|++...... .....+++.|+|||++.+ ..++.++|||||||++|+|++|++||......... ... +
T Consensus 163 g~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~ 233 (343)
T cd07880 163 GLARQTDSE---------MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTG 233 (343)
T ss_pred ccccccccC---------ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcC
Confidence 998765322 133467899999998865 45889999999999999999999999744322111 100 0
Q ss_pred c-------------cccccCC-------CCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHH
Q 003703 674 K-------------LSSILDP-------LAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLV 717 (801)
Q Consensus 674 ~-------------~~~~~d~-------~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~ 717 (801)
. ....... .........+..+.+++.+|++.||.+||++.+.+.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~ 297 (343)
T cd07880 234 TPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA 297 (343)
T ss_pred CCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0 0000000 000111123456889999999999999999985443
No 354
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=1.3e-32 Score=294.53 Aligned_cols=230 Identities=26% Similarity=0.344 Sum_probs=177.8
Q ss_pred eeeecCceEEEEEEEC--CeEEEEEEeccCCcc---cHHHHHHHHHH---HhcCCCCceeeEecccc--CCcceeeecCC
Q 003703 462 KVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ---GQLEFQQEVRV---LSKLQHPHLVTLLGACP--EAWSLVYEYLP 531 (801)
Q Consensus 462 ~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~---~~~~f~~E~~i---l~~l~HpnIV~l~g~~~--~~~~LV~E~~~ 531 (801)
.||+|+||.||++... |+.||||.+...... ....+..|..+ +....||||+.+++++. +..++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 3899999999999874 789999998654322 12224444443 44457999999998874 35789999999
Q ss_pred CCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcC
Q 003703 532 NGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYL 611 (801)
Q Consensus 532 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~ 611 (801)
||+|..++... ..+++..+..|+.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++..+....
T Consensus 81 g~~L~~~l~~~---~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~--- 151 (278)
T cd05606 81 GGDLHYHLSQH---GVFSEAEMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK--- 151 (278)
T ss_pred CCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCCCCHHHEEECCCCCEEEccCcCccccCccC---
Confidence 99999888643 36899999999999999999999987 9999999999999999999999999987653221
Q ss_pred CCccccCCCCCCCCCCCccccccC-CCCcchhHHhHHHHHHHHHhCCCCCCChhHHH-HHhhcCccccccCCCCCCCCHH
Q 003703 612 PSFHRSTAPKGSFPYADPEYHRTG-VLTPKSDSYSFGLIILQLLTGRLPVGLAGEVR-RAVSCGKLSSILDPLAGDWPTF 689 (801)
Q Consensus 612 ~~~~~~~~~~Gt~~Y~APE~~~~~-~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~-~~~~~g~~~~~~d~~~~~~~~~ 689 (801)
.....|+..|+|||++.++ .++.++|||||||++|+|++|+.||....... ...... .......++..
T Consensus 152 -----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 221 (278)
T cd05606 152 -----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM-----TLTMAVELPDS 221 (278)
T ss_pred -----CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHH-----hhccCCCCCCc
Confidence 2234699999999998754 68999999999999999999999996432110 000000 00011223444
Q ss_pred HHHHHHHHHHHhhhhCCCCCC
Q 003703 690 VARRLVDLGLQCCELYGRERP 710 (801)
Q Consensus 690 ~~~~l~~Li~~Cl~~dP~~RP 710 (801)
.+..+.+++.+|+..+|.+||
T Consensus 222 ~s~~~~~li~~~l~~~p~~R~ 242 (278)
T cd05606 222 FSPELRSLLEGLLQRDVNRRL 242 (278)
T ss_pred CCHHHHHHHHHHhhcCHHhcc
Confidence 567899999999999999999
No 355
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-34 Score=287.09 Aligned_cols=252 Identities=27% Similarity=0.369 Sum_probs=195.5
Q ss_pred cccCHHHHHHHhcCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc-ccHHHHHHHHHHHhcC-CCCceeeEecc
Q 003703 443 AEFSLADLQTATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKL-QHPHLVTLLGA 518 (801)
Q Consensus 443 ~~~~~~el~~at~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~-~~~~~f~~E~~il~~l-~HpnIV~l~g~ 518 (801)
-.|+-++|+... .||.|+||+|+|-.++ |..+|||++..... ..+.+|..|.++..+- +.||||++||+
T Consensus 59 ~~F~~~~Lqdlg-------~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa 131 (361)
T KOG1006|consen 59 HTFTSDNLQDLG-------EIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGA 131 (361)
T ss_pred cccccchHHHHH-------HhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhh
Confidence 346666665554 4999999999999886 89999999987665 5667788899877666 79999999998
Q ss_pred c--cCCcceeeecCCCCchhhhhhhc--CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCee
Q 003703 519 C--PEAWSLVYEYLPNGSLQDRLFRK--SNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSK 594 (801)
Q Consensus 519 ~--~~~~~LV~E~~~~gsL~~~L~~~--~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vK 594 (801)
+ ....++.||.| ..||..+...- -....++....-.|...++.||.||-... .||||||||+|||||..|.+|
T Consensus 132 ~F~EGdcWiCMELM-d~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vK 208 (361)
T KOG1006|consen 132 LFSEGDCWICMELM-DISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVK 208 (361)
T ss_pred hhcCCceeeeHHHH-hhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEe
Confidence 7 33467899998 56665433211 11245777888888888999999998865 499999999999999999999
Q ss_pred eecccceeeccCCCCcCCCccccCCCCCCCCCCCcccccc--CCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHH---
Q 003703 595 ICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT--GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRA--- 669 (801)
Q Consensus 595 L~DFGla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~--~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~--- 669 (801)
|||||++..+.+.- ..+.-+|--.|||||.+.. .+|+.+|||||||++|||+.||..|+...+.+.+.
T Consensus 209 LCDFGIcGqLv~Si-------AkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~ 281 (361)
T KOG1006|consen 209 LCDFGICGQLVDSI-------AKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQ 281 (361)
T ss_pred eecccchHhHHHHH-------HhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHH
Confidence 99999998765432 1244568888999998753 46999999999999999999999999876665543
Q ss_pred hhcCccccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchH
Q 003703 670 VSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITP 714 (801)
Q Consensus 670 ~~~g~~~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e 714 (801)
+..|....++.+. -..+.+..+..++..|+.+|..+||.+.+
T Consensus 282 Vv~gdpp~l~~~~---~~~~~s~~~~~fintCl~Kd~~~Rpky~~ 323 (361)
T KOG1006|consen 282 VVIGDPPILLFDK---ECVHYSFSMVRFINTCLIKDRSDRPKYDD 323 (361)
T ss_pred HHcCCCCeecCcc---cccccCHHHHHHHHHHhhcccccCcchhh
Confidence 3455544332221 11236678999999999999999999984
No 356
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.4e-33 Score=311.23 Aligned_cols=248 Identities=29% Similarity=0.456 Sum_probs=207.0
Q ss_pred cccceeeecCceEEEEEEEC------CeEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEeccccC-Ccceeeec
Q 003703 458 SESFKVGQGGFGCVYKGEML------GRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACPE-AWSLVYEY 529 (801)
Q Consensus 458 ~~~~~LG~G~fG~Vy~g~~~------g~~vAiK~l~~~~~-~~~~~f~~E~~il~~l~HpnIV~l~g~~~~-~~~LV~E~ 529 (801)
..+++||.|+||+||+|.+- .-+||||++..... +...+|..|+-+|++++|||+++|+|+|.. ...||.+|
T Consensus 699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~~qlvtq~ 778 (1177)
T KOG1025|consen 699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLSTLQLVTQL 778 (1177)
T ss_pred hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccchHHHHHHh
Confidence 34568999999999999884 35799999876543 455689999999999999999999999954 47799999
Q ss_pred CCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCC
Q 003703 530 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTL 609 (801)
Q Consensus 530 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~ 609 (801)
||.|+|.|++..+. ..+-.+..+.|..|||.|+.|||.+. ++||||-..|||+..-.++||.|||+++.+..+..
T Consensus 779 mP~G~LlDyvr~hr--~~igsq~lLnw~~QIAkgM~YLe~qr---lVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ 853 (1177)
T KOG1025|consen 779 MPLGCLLDYVREHR--DNIGSQDLLNWCYQIAKGMKYLEEQR---LVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEK 853 (1177)
T ss_pred cccchHHHHHHHhh--ccccHHHHHHHHHHHHHHHHHHHhcc---hhhhhhhhhheeecCCCeEEEEecchhhccCcccc
Confidence 99999999998754 46777999999999999999999877 99999999999999999999999999999876653
Q ss_pred cCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCC--ChhHHHHHhhcCccccccCCCCCCC
Q 003703 610 YLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVG--LAGEVRRAVSCGKLSSILDPLAGDW 686 (801)
Q Consensus 610 ~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~--~~~~~~~~~~~g~~~~~~d~~~~~~ 686 (801)
.. ......-.+-|||=|.+....|+.++|||||||.+|||+| |..|+. ...++...++.|.. -..
T Consensus 854 ey----~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~geR--------Lsq 921 (1177)
T KOG1025|consen 854 EY----SAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKGER--------LSQ 921 (1177)
T ss_pred cc----cccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhcccc--------CCC
Confidence 21 2233344567999999999999999999999999999999 999986 34556666666543 234
Q ss_pred CHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHHh
Q 003703 687 PTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 723 (801)
Q Consensus 687 ~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~l 723 (801)
|+..+.++..++.+||..|+..||+++ ++...+.++
T Consensus 922 PpiCtiDVy~~mvkCwmid~~~rp~fk-el~~~fs~~ 957 (1177)
T KOG1025|consen 922 PPICTIDVYMVMVKCWMIDADSRPTFK-ELAEEFSRM 957 (1177)
T ss_pred CCCccHHHHHHHHHHhccCcccCccHH-HHHHHHHHH
Confidence 566778999999999999999999999 566666554
No 357
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=4.7e-32 Score=297.25 Aligned_cols=255 Identities=18% Similarity=0.237 Sum_probs=187.8
Q ss_pred eeeec--CceEEEEEEE--CCeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEeccccC--CcceeeecCCCC
Q 003703 462 KVGQG--GFGCVYKGEM--LGRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYLPNG 533 (801)
Q Consensus 462 ~LG~G--~fG~Vy~g~~--~g~~vAiK~l~~~~~--~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E~~~~g 533 (801)
.||+| +||+||++.+ .|+.||+|++..... .....+.+|+.++..++||||++++++|.. ..++||||+++|
T Consensus 5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~ 84 (328)
T cd08226 5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYG 84 (328)
T ss_pred HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCC
Confidence 36666 9999999988 489999999875432 223568899999999999999999999843 578999999999
Q ss_pred chhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCC-
Q 003703 534 SLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLP- 612 (801)
Q Consensus 534 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~- 612 (801)
+|.+++..... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.++++|||.+...........
T Consensus 85 ~l~~~l~~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~~---ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (328)
T cd08226 85 SANSLLKTYFP-EGMSEALIGNILFGALRGLNYLHQNG---YIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKV 160 (328)
T ss_pred CHHHHHHhhcc-cCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccc
Confidence 99998876532 35888999999999999999999987 99999999999999999999999986543322111000
Q ss_pred CccccCCCCCCCCCCCccccccC--CCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhh--cCccc------------
Q 003703 613 SFHRSTAPKGSFPYADPEYHRTG--VLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVS--CGKLS------------ 676 (801)
Q Consensus 613 ~~~~~~~~~Gt~~Y~APE~~~~~--~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~--~g~~~------------ 676 (801)
.........++..|+|||++.+. .++.++|||||||++|+|++|++||........... .+...
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (328)
T cd08226 161 VYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEE 240 (328)
T ss_pred cccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhh
Confidence 00011123456779999998763 578999999999999999999999964332111110 00000
Q ss_pred -------------------------cccCCC-CCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHH
Q 003703 677 -------------------------SILDPL-AGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKEL 720 (801)
Q Consensus 677 -------------------------~~~d~~-~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L 720 (801)
.+.+.. ....+..++..+.+|+.+||+.||.+|||+.+.+.+.+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~ 310 (328)
T cd08226 241 SRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAF 310 (328)
T ss_pred hhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHH
Confidence 000000 01112346678999999999999999999996664444
No 358
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=3.8e-33 Score=325.85 Aligned_cols=252 Identities=29% Similarity=0.356 Sum_probs=186.9
Q ss_pred HhcCccccceeeecCceEEEEEEE--CCeEEEEEEeccCCc-ccHHHHHHHHHHHhcCCCCceeeEeccccC--------
Q 003703 453 ATCNFSESFKVGQGGFGCVYKGEM--LGRTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQHPHLVTLLGACPE-------- 521 (801)
Q Consensus 453 at~~f~~~~~LG~G~fG~Vy~g~~--~g~~vAiK~l~~~~~-~~~~~f~~E~~il~~l~HpnIV~l~g~~~~-------- 521 (801)
--.+|.+...||+||||.||+++. +|..||||++..... .....+.+|+.+|++|+|||||++|.++.+
T Consensus 477 Y~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ 556 (1351)
T KOG1035|consen 477 YLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVL 556 (1351)
T ss_pred HhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccc
Confidence 446788888999999999999977 499999999976542 222357899999999999999999743200
Q ss_pred --------------------------------------------------------------------------------
Q 003703 522 -------------------------------------------------------------------------------- 521 (801)
Q Consensus 522 -------------------------------------------------------------------------------- 521 (801)
T Consensus 557 ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~ 636 (1351)
T KOG1035|consen 557 EIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDS 636 (1351)
T ss_pred cccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccccc
Confidence
Q ss_pred ---------------------------------CcceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 003703 522 ---------------------------------AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLH 568 (801)
Q Consensus 522 ---------------------------------~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH 568 (801)
.+|+=||||+..+|.+++.++.... .-...++++.+|+.||.|+|
T Consensus 637 e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~--~~d~~wrLFreIlEGLaYIH 714 (1351)
T KOG1035|consen 637 EGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS--QRDEAWRLFREILEGLAYIH 714 (1351)
T ss_pred CCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch--hhHHHHHHHHHHHHHHHHHH
Confidence 0124567777666666665543211 24677899999999999999
Q ss_pred hcCCCceeeCCCCCCCeeecCCCCeeeecccceeecc----CC--------CCcCCCccccCCCCCCCCCCCccccccC-
Q 003703 569 SSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVT----ED--------TLYLPSFHRSTAPKGSFPYADPEYHRTG- 635 (801)
Q Consensus 569 ~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~----~~--------~~~~~~~~~~~~~~Gt~~Y~APE~~~~~- 635 (801)
+.+ ||||||||.||+||.++.|||+|||+|+... .. ..........+..+||.-|+|||++.+.
T Consensus 715 ~~g---iIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~ 791 (1351)
T KOG1035|consen 715 DQG---IIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTS 791 (1351)
T ss_pred hCc---eeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccc
Confidence 998 9999999999999999999999999998721 00 0001111234677899999999998765
Q ss_pred --CCCcchhHHhHHHHHHHHHhCCCCCCChh---HHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCC
Q 003703 636 --VLTPKSDSYSFGLIILQLLTGRLPVGLAG---EVRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERP 710 (801)
Q Consensus 636 --~~s~ksDVwSlGvvL~ELltG~~Pf~~~~---~~~~~~~~g~~~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RP 710 (801)
.|+.|+|+|||||||+||+. ||+..- .+...++.|.+... .++.......-..++.++++.||.+||
T Consensus 792 ~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR~g~iP~~-----~~f~~~~~~~e~slI~~Ll~hdP~kRP 863 (1351)
T KOG1035|consen 792 SNKYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLRKGSIPEP-----ADFFDPEHPEEASLIRWLLSHDPSKRP 863 (1351)
T ss_pred cccccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcccCCCCCC-----cccccccchHHHHHHHHHhcCCCccCC
Confidence 49999999999999999984 565322 23334455555433 233344455677899999999999999
Q ss_pred CchHHHH
Q 003703 711 DITPSLV 717 (801)
Q Consensus 711 t~~e~l~ 717 (801)
|+.+.|.
T Consensus 864 tA~eLL~ 870 (1351)
T KOG1035|consen 864 TATELLN 870 (1351)
T ss_pred CHHHHhh
Confidence 9996543
No 359
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=3.2e-32 Score=287.49 Aligned_cols=243 Identities=24% Similarity=0.311 Sum_probs=190.6
Q ss_pred CccccceeeecCceEEEEEEEC--CeEEEEEEeccCC-----cccHHHHHHHHHHHhcCCCCceeeEeccccC--Cccee
Q 003703 456 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHN-----MQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLV 526 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~-----~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV 526 (801)
+|...++||+|+||.||++... +..+++|+++... ......+..|+.++..++||||+++++++.+ ..++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 3667788999999999999875 4456666654322 1223357789999999999999999998843 57899
Q ss_pred eecCCCCchhhhhhhc-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeecc
Q 003703 527 YEYLPNGSLQDRLFRK-SNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVT 605 (801)
Q Consensus 527 ~E~~~~gsL~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~ 605 (801)
|||+++++|.+++... .....+++..++.++.|++.||.|||+.+ ++|+||+|+||+++. +.+||+|||+++...
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRR---ILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcC---ccccCCChhheEeec-CCEeecccCceeecC
Confidence 9999999999988653 22356899999999999999999999987 999999999999976 569999999998764
Q ss_pred CCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHH--HhhcCccccccCCCC
Q 003703 606 EDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRR--AVSCGKLSSILDPLA 683 (801)
Q Consensus 606 ~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~--~~~~g~~~~~~d~~~ 683 (801)
.... ......|++.|+|||++.+..++.++||||||+++|+|++|..||........ .+..+. .
T Consensus 157 ~~~~------~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--------~ 222 (260)
T cd08222 157 GSCD------LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGP--------T 222 (260)
T ss_pred CCcc------cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCC--------C
Confidence 3321 12345688999999999888899999999999999999999999964332211 111111 1
Q ss_pred CCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 684 GDWPTFVARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 684 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
...+...+..+.+++.+||..+|.+||++.+.+
T Consensus 223 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il 255 (260)
T cd08222 223 PSLPETYSRQLNSIMQSMLNKDPSLRPSAAEIL 255 (260)
T ss_pred CCCcchhcHHHHHHHHHHhcCChhhCcCHHHHh
Confidence 123445667899999999999999999998544
No 360
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=2.3e-32 Score=299.50 Aligned_cols=253 Identities=25% Similarity=0.302 Sum_probs=195.0
Q ss_pred CccccceeeecCceEEEEEEEC--CeEEEEEEeccCC--cccHHHHHHHHHHHhcCCCCceeeEeccccC-------Ccc
Q 003703 456 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHN--MQGQLEFQQEVRVLSKLQHPHLVTLLGACPE-------AWS 524 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~--~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~-------~~~ 524 (801)
+|.....||.|+||.||+|+.. |..||||.+.... ......+.+|+.++..++||||+++++++.. ..+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 4677789999999999999875 7899999987643 2334568899999999999999999998843 368
Q ss_pred eeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeec
Q 003703 525 LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLV 604 (801)
Q Consensus 525 LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~ 604 (801)
+||+|++ ++|.+++.... .+++..++.++.+++.||.|||+.+ |+||||||+|||++.++.++|+|||++...
T Consensus 81 lv~e~~~-~~l~~~l~~~~---~l~~~~~~~i~~~l~~~l~~LH~~g---i~H~dlkp~nili~~~~~~~L~dfg~~~~~ 153 (330)
T cd07834 81 IVTELME-TDLHKVIKSPQ---PLTDDHIQYFLYQILRGLKYLHSAN---VIHRDLKPSNILVNSNCDLKICDFGLARGV 153 (330)
T ss_pred EEecchh-hhHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEcccCceEee
Confidence 9999997 58888875433 6899999999999999999999988 999999999999999999999999999887
Q ss_pred cCCCCcCCCccccCCCCCCCCCCCccccccC-CCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHH---hhc-Cc-----
Q 003703 605 TEDTLYLPSFHRSTAPKGSFPYADPEYHRTG-VLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRA---VSC-GK----- 674 (801)
Q Consensus 605 ~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~-~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~---~~~-g~----- 674 (801)
...... ........||+.|+|||++.+. .++.++||||||+++|+|++|++||......... ... +.
T Consensus 154 ~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 230 (330)
T cd07834 154 DPDEDE---KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEED 230 (330)
T ss_pred cccccc---cccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhH
Confidence 543211 0112345689999999999887 8999999999999999999999999644321110 000 00
Q ss_pred --------cccccC---CC----CCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHH
Q 003703 675 --------LSSILD---PL----AGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVK 718 (801)
Q Consensus 675 --------~~~~~d---~~----~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~ 718 (801)
....+. .. ........+..+.+++.+||+.+|.+||++.+.+.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 289 (330)
T cd07834 231 LKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAH 289 (330)
T ss_pred hhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 000000 00 000112245678999999999999999999865533
No 361
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=1.2e-32 Score=295.60 Aligned_cols=249 Identities=27% Similarity=0.351 Sum_probs=192.6
Q ss_pred CccccceeeecCceEEEEEEE-----CCeEEEEEEeccCCc----ccHHHHHHHHHHHhcC-CCCceeeEeccccC--Cc
Q 003703 456 NFSESFKVGQGGFGCVYKGEM-----LGRTVAIKMLYSHNM----QGQLEFQQEVRVLSKL-QHPHLVTLLGACPE--AW 523 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~-----~g~~vAiK~l~~~~~----~~~~~f~~E~~il~~l-~HpnIV~l~g~~~~--~~ 523 (801)
+|.....||+|+||.||+++. .+..||||++..... .....+.+|+.++.++ +||||+++++.+.. ..
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 366778899999999999875 367899999875422 2234588999999999 59999999988743 47
Q ss_pred ceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceee
Q 003703 524 SLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRL 603 (801)
Q Consensus 524 ~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~ 603 (801)
++||||+++|+|.+.+... ..+++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||+++.
T Consensus 81 ~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~~---~~H~dl~p~nil~~~~~~~~l~dfg~~~~ 154 (288)
T cd05583 81 HLILDYVNGGELFTHLYQR---EHFTESEVRVYIAEIVLALDHLHQLG---IIYRDIKLENILLDSEGHVVLTDFGLSKE 154 (288)
T ss_pred EEEEecCCCCcHHHHHhhc---CCcCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEEECccccc
Confidence 7999999999999988654 35788999999999999999999977 99999999999999999999999999887
Q ss_pred ccCCCCcCCCccccCCCCCCCCCCCccccccCC--CCcchhHHhHHHHHHHHHhCCCCCCChhHH--HHHhhcCcccccc
Q 003703 604 VTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGV--LTPKSDSYSFGLIILQLLTGRLPVGLAGEV--RRAVSCGKLSSIL 679 (801)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~--~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~--~~~~~~g~~~~~~ 679 (801)
+...... ......|++.|+|||.+.+.. ++.++||||||+++|+|++|..||...... ...+......
T Consensus 155 ~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~--- 226 (288)
T cd05583 155 FLAEEEE-----RAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILK--- 226 (288)
T ss_pred ccccccc-----ccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHc---
Confidence 6433211 123456899999999987655 788999999999999999999999632211 0111110000
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHH
Q 003703 680 DPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELE 721 (801)
Q Consensus 680 d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~ 721 (801)
.....+...+..+.+++.+||+.+|.+|||+. .+...|+
T Consensus 227 --~~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~-~~~~~l~ 265 (288)
T cd05583 227 --SKPPFPKTMSAEARDFIQKLLEKDPKKRLGAN-GADEIKN 265 (288)
T ss_pred --cCCCCCcccCHHHHHHHHHHhcCCHhhccCcc-hHHHHhc
Confidence 01122333556789999999999999999987 4555544
No 362
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=4.4e-32 Score=295.58 Aligned_cols=238 Identities=26% Similarity=0.343 Sum_probs=186.8
Q ss_pred ccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcc---cHHHHHHHHHHHhcCCCCceeeEeccccC--Ccceeeec
Q 003703 457 FSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ---GQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEY 529 (801)
Q Consensus 457 f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~---~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E~ 529 (801)
|.....||+|+||.||+|+.. |..||+|.+...... ....+.+|+.++..++|||+++++++|.+ ..++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 555567999999999999874 889999998654332 22457889999999999999999999854 47899999
Q ss_pred CCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCC
Q 003703 530 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTL 609 (801)
Q Consensus 530 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~ 609 (801)
+. |+|.+.+.... .++++..++.++.|++.||.|||+.+ |+|+||+|+||+++.++.+||+|||++.....
T Consensus 103 ~~-~~l~~~l~~~~--~~l~~~~~~~~~~qi~~al~~LH~~g---i~H~dl~p~nili~~~~~~kL~dfg~~~~~~~--- 173 (313)
T cd06633 103 CL-GSASDLLEVHK--KPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSASKSSP--- 173 (313)
T ss_pred CC-CCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChhhEEECCCCCEEEeecCCCcccCC---
Confidence 95 57777775433 46899999999999999999999987 99999999999999999999999998864321
Q ss_pred cCCCccccCCCCCCCCCCCccccc---cCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhh--cCccccccCCCCC
Q 003703 610 YLPSFHRSTAPKGSFPYADPEYHR---TGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVS--CGKLSSILDPLAG 684 (801)
Q Consensus 610 ~~~~~~~~~~~~Gt~~Y~APE~~~---~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~--~g~~~~~~d~~~~ 684 (801)
.....|++.|+|||++. .+.++.++|||||||++|+|++|.+||........... .+.....
T Consensus 174 -------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~------ 240 (313)
T cd06633 174 -------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTL------ 240 (313)
T ss_pred -------CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCC------
Confidence 23456899999999874 46688999999999999999999999865433221111 1111111
Q ss_pred CCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHH
Q 003703 685 DWPTFVARRLVDLGLQCCELYGRERPDITPSLV 717 (801)
Q Consensus 685 ~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~ 717 (801)
.....+..+.+|+.+||+.+|.+||++.+.+.
T Consensus 241 -~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~ 272 (313)
T cd06633 241 -QSNEWTDSFRGFVDYCLQKIPQERPASAELLR 272 (313)
T ss_pred -CccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11123356889999999999999999985443
No 363
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=5.9e-33 Score=306.89 Aligned_cols=247 Identities=28% Similarity=0.422 Sum_probs=204.6
Q ss_pred HHHhcCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCccc--HHHHHHHHHHHhcCCCCceeeEecccc--CCcc
Q 003703 451 QTATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQG--QLEFQQEVRVLSKLQHPHLVTLLGACP--EAWS 524 (801)
Q Consensus 451 ~~at~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~--~~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~ 524 (801)
..-...|.....||+|.|+.|..|++. |..||||.+.+..... ...+.+|+.+|..++|||||+++++.. ..+|
T Consensus 52 ~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~ly 131 (596)
T KOG0586|consen 52 SNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLY 131 (596)
T ss_pred cccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeE
Confidence 344577888999999999999999875 9999999997764432 234889999999999999999999874 4689
Q ss_pred eeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeec
Q 003703 525 LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLV 604 (801)
Q Consensus 525 LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~ 604 (801)
+||||..+|.+.++|.+++. +.......++.|+.+|++|||+.+ |||||||++||||+.+.++||+|||++..+
T Consensus 132 lV~eya~~ge~~~yl~~~gr---~~e~~ar~~F~q~vsaveYcH~k~---ivHrdLk~eNilL~~~mnikIaDfgfS~~~ 205 (596)
T KOG0586|consen 132 LVMEYASGGELFDYLVKHGR---MKEKEARAKFRQIVSAVEYCHSKN---IVHRDLKAENILLDENMNIKIADFGFSTFF 205 (596)
T ss_pred EEEEeccCchhHHHHHhccc---chhhhhhhhhHHHHHHHHHHhhcc---eeccccchhhcccccccceeeeccccceee
Confidence 99999999999999988764 333778889999999999999988 999999999999999999999999999988
Q ss_pred cCCCCcCCCccccCCCCCCCCCCCccccccCCC-CcchhHHhHHHHHHHHHhCCCCCCChh--HHHHHhhcCccccccCC
Q 003703 605 TEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVL-TPKSDSYSFGLIILQLLTGRLPVGLAG--EVRRAVSCGKLSSILDP 681 (801)
Q Consensus 605 ~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~-s~ksDVwSlGvvL~ELltG~~Pf~~~~--~~~~~~~~g~~~~~~d~ 681 (801)
.... ...+.+|++.|.|||++.+..| ++.+|+||+|++||-|+.|..||++.. ..+..+..|++
T Consensus 206 ~~~~-------~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~------ 272 (596)
T KOG0586|consen 206 DYGL-------MLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKY------ 272 (596)
T ss_pred cccc-------cccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeeee------
Confidence 6443 3457789999999999998877 589999999999999999999997422 22222222222
Q ss_pred CCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHH
Q 003703 682 LAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKE 719 (801)
Q Consensus 682 ~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~ 719 (801)
..|..++.+..+|+.+++-++|..|+++.+...+.
T Consensus 273 ---rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~ 307 (596)
T KOG0586|consen 273 ---RIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDR 307 (596)
T ss_pred ---cccceeechhHHHHHHhhccCccccCCHHHhhhhc
Confidence 23445677889999999999999999998655443
No 364
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=4e-32 Score=295.18 Aligned_cols=238 Identities=26% Similarity=0.365 Sum_probs=187.3
Q ss_pred ccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCCCceeeEecccc--CCcceeeec
Q 003703 457 FSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEY 529 (801)
Q Consensus 457 f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~---~~~~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~LV~E~ 529 (801)
|...+.||.|+||.||+|+.. +..||+|.+..... .....+.+|+.+++.++|||++++++++. ...++||||
T Consensus 17 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 96 (308)
T cd06634 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY 96 (308)
T ss_pred HHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEc
Confidence 556678999999999999874 78899999864322 22345778999999999999999999874 357899999
Q ss_pred CCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCC
Q 003703 530 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTL 609 (801)
Q Consensus 530 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~ 609 (801)
+. |+|.+.+.... .++++..+..++.+++.||.|||+.+ ++||||+|+|||++.++.+||+|||++......
T Consensus 97 ~~-~~l~~~~~~~~--~~l~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~-- 168 (308)
T cd06634 97 CL-GSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-- 168 (308)
T ss_pred cC-CCHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHhEEECCCCcEEECCcccceeecCc--
Confidence 96 67877765433 45889999999999999999999987 999999999999999999999999998765432
Q ss_pred cCCCccccCCCCCCCCCCCccccc---cCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHH--HHhhcCccccccCCCCC
Q 003703 610 YLPSFHRSTAPKGSFPYADPEYHR---TGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVR--RAVSCGKLSSILDPLAG 684 (801)
Q Consensus 610 ~~~~~~~~~~~~Gt~~Y~APE~~~---~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~--~~~~~g~~~~~~d~~~~ 684 (801)
....|++.|+|||++. ...++.++|||||||++|+|++|+.||....... ..+..+.....
T Consensus 169 --------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~------ 234 (308)
T cd06634 169 --------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPAL------ 234 (308)
T ss_pred --------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCCCCc------
Confidence 2346889999999874 3568899999999999999999999986433221 11222211110
Q ss_pred CCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHH
Q 003703 685 DWPTFVARRLVDLGLQCCELYGRERPDITPSLV 717 (801)
Q Consensus 685 ~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~ 717 (801)
.+...+..+.+|+.+||..+|.+||++.+.+.
T Consensus 235 -~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~ 266 (308)
T cd06634 235 -QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK 266 (308)
T ss_pred -CcccccHHHHHHHHHHhhCCcccCCCHHHHhh
Confidence 12235567899999999999999999985443
No 365
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=3.6e-32 Score=290.00 Aligned_cols=247 Identities=27% Similarity=0.358 Sum_probs=191.6
Q ss_pred ccccceeeecCceEEEEEEEC--CeEEEEEEeccCC--cccHHHHHHHHHHHhcCCCCceeeEeccccC--CcceeeecC
Q 003703 457 FSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHN--MQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYL 530 (801)
Q Consensus 457 f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~--~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E~~ 530 (801)
|.....||+|+||.||+|+.. +..||+|++.... ......+..|+.++++++||||+++++++.+ ..++||||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 445567999999999999885 7999999997654 2234567889999999999999999998854 578999999
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCc
Q 003703 531 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLY 610 (801)
Q Consensus 531 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~ 610 (801)
+ ++|.+++.... ..+++..+..++.+++.||.|||+.+ |+||||+|+||+++.++.+||+|||+++.......
T Consensus 81 ~-~~l~~~i~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~- 153 (282)
T cd07829 81 D-MDLKKYLDKRP--GPLSPNLIKSIMYQLLRGLAYCHSHR---ILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR- 153 (282)
T ss_pred C-cCHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChheEEEcCCCCEEEecCCcccccCCCcc-
Confidence 7 58999887653 36889999999999999999999987 99999999999999999999999999987653321
Q ss_pred CCCccccCCCCCCCCCCCccccccC-CCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhhc---------------Cc
Q 003703 611 LPSFHRSTAPKGSFPYADPEYHRTG-VLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSC---------------GK 674 (801)
Q Consensus 611 ~~~~~~~~~~~Gt~~Y~APE~~~~~-~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~---------------g~ 674 (801)
......++..|+|||++.+. .++.++|||||||++|||++|++||............ ..
T Consensus 154 -----~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (282)
T cd07829 154 -----TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTK 228 (282)
T ss_pred -----ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcc
Confidence 12234567889999988766 8899999999999999999999999754332111000 00
Q ss_pred cccccCCCCCCC--------CHHHHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 675 LSSILDPLAGDW--------PTFVARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 675 ~~~~~d~~~~~~--------~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
+. ..+.....+ .......+.+++.+||..+|.+||++.+.+
T Consensus 229 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l 277 (282)
T cd07829 229 LP-DYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEAL 277 (282)
T ss_pred cc-cccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHh
Confidence 00 000000011 112356899999999999999999988533
No 366
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=4.6e-32 Score=297.63 Aligned_cols=251 Identities=25% Similarity=0.327 Sum_probs=192.2
Q ss_pred HHHHHhcCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEecccc---C
Q 003703 449 DLQTATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACP---E 521 (801)
Q Consensus 449 el~~at~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~--~~~~~f~~E~~il~~l~HpnIV~l~g~~~---~ 521 (801)
++...+++|.....||.|+||.||++... |..||||++..... .....+.+|+.++..++||||++++++|. .
T Consensus 4 ~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 83 (328)
T cd07856 4 TVFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLE 83 (328)
T ss_pred ceeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCC
Confidence 34457889999999999999999999865 88999998864322 23456788999999999999999999873 3
Q ss_pred CcceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccce
Q 003703 522 AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGIC 601 (801)
Q Consensus 522 ~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla 601 (801)
..++|+||+ +++|..++.. .++++.....++.|++.||.|||+.+ |+||||+|+|||++.++.+||+|||++
T Consensus 84 ~~~lv~e~~-~~~L~~~~~~----~~~~~~~~~~~~~ql~~aL~~LH~~~---iiH~dl~p~Nili~~~~~~~l~dfg~~ 155 (328)
T cd07856 84 DIYFVTELL-GTDLHRLLTS----RPLEKQFIQYFLYQILRGLKYVHSAG---VVHRDLKPSNILINENCDLKICDFGLA 155 (328)
T ss_pred cEEEEeehh-ccCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEeECCCCCEEeCccccc
Confidence 478999998 6788887753 35778888999999999999999988 999999999999999999999999998
Q ss_pred eeccCCCCcCCCccccCCCCCCCCCCCcccccc-CCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHH------------
Q 003703 602 RLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRR------------ 668 (801)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~-~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~------------ 668 (801)
...... .....+++.|+|||++.+ ..++.++|||||||++|+|+||++||........
T Consensus 156 ~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~ 226 (328)
T cd07856 156 RIQDPQ---------MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPP 226 (328)
T ss_pred cccCCC---------cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 754321 123467889999998765 5689999999999999999999999964332110
Q ss_pred -----HhhcCccccccCCC--CCCCC-----HHHHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 669 -----AVSCGKLSSILDPL--AGDWP-----TFVARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 669 -----~~~~g~~~~~~d~~--~~~~~-----~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
.+..+.....+... ....+ ...+..+.+++.+||+.+|.+||++.+.+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell 286 (328)
T cd07856 227 DDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEAL 286 (328)
T ss_pred HHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHh
Confidence 00001100000000 01111 12356899999999999999999988543
No 367
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.98 E-value=4.2e-32 Score=290.83 Aligned_cols=250 Identities=27% Similarity=0.436 Sum_probs=191.9
Q ss_pred cceeeecCceEEEEEEECCeEEEEEEeccCCcccHHHHHHHHHHHhc--CCCCceeeEecccc------CCcceeeecCC
Q 003703 460 SFKVGQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSK--LQHPHLVTLLGACP------EAWSLVYEYLP 531 (801)
Q Consensus 460 ~~~LG~G~fG~Vy~g~~~g~~vAiK~l~~~~~~~~~~f~~E~~il~~--l~HpnIV~l~g~~~------~~~~LV~E~~~ 531 (801)
..+||+|.||.||+|++.++.||||++.. +....|.+|-+|++. |+|+||++|+++-. -++.||++|.+
T Consensus 215 ~eli~~Grfg~V~KaqL~~~~VAVKifp~---~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh~ 291 (534)
T KOG3653|consen 215 LELIGRGRFGCVWKAQLDNRLVAVKIFPE---QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEFHP 291 (534)
T ss_pred HHHhhcCccceeehhhccCceeEEEecCH---HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeeecc
Confidence 34699999999999999999999999854 455678888888875 48999999998752 14679999999
Q ss_pred CCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC------CceeeCCCCCCCeeecCCCCeeeecccceeecc
Q 003703 532 NGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKP------EKIVHGDLKPQNILLDSELSSKICDFGICRLVT 605 (801)
Q Consensus 532 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~------~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~ 605 (801)
.|||.++|..+ .++|....+|+..+++||+|||+..| ++|+|||||+.||||.+|+++.|+|||||..+.
T Consensus 292 kGsL~dyL~~n----tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~ 367 (534)
T KOG3653|consen 292 KGSLCDYLKAN----TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLE 367 (534)
T ss_pred CCcHHHHHHhc----cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEec
Confidence 99999999764 58999999999999999999998553 479999999999999999999999999999887
Q ss_pred CCCCcCCCccccCCCCCCCCCCCccccccCC-CC-----cchhHHhHHHHHHHHHhCCCCC------------C------
Q 003703 606 EDTLYLPSFHRSTAPKGSFPYADPEYHRTGV-LT-----PKSDSYSFGLIILQLLTGRLPV------------G------ 661 (801)
Q Consensus 606 ~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~-~s-----~ksDVwSlGvvL~ELltG~~Pf------------~------ 661 (801)
.+.... .....+||..|||||++.+.. +. .+.||||+|.|||||++...-+ .
T Consensus 368 p~~~~~----d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~h 443 (534)
T KOG3653|consen 368 PGKPQG----DTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNH 443 (534)
T ss_pred CCCCCc----chhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCC
Confidence 654332 234578999999999986532 22 3699999999999999975433 1
Q ss_pred -ChhHHHHHhhcCcc-ccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHHhh
Q 003703 662 -LAGEVRRAVSCGKL-SSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLH 724 (801)
Q Consensus 662 -~~~~~~~~~~~g~~-~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~l~ 724 (801)
..+.++..+...+. ..+.|.... ......+.+.+..||+.||+-|-|.. =+.+.+..+.
T Consensus 444 Pt~e~mq~~VV~kK~RP~~p~~W~~---h~~~~~l~et~EeCWDhDaeARLTA~-Cv~eR~~~l~ 504 (534)
T KOG3653|consen 444 PTLEEMQELVVRKKQRPKIPDAWRK---HAGMAVLCETIEECWDHDAEARLTAG-CVEERMAELM 504 (534)
T ss_pred CCHHHHHHHHHhhccCCCChhhhhc---CccHHHHHHHHHHHcCCchhhhhhhH-HHHHHHHHHh
Confidence 12223333322221 111111111 12455789999999999999999987 4554444443
No 368
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.98 E-value=2.9e-32 Score=300.88 Aligned_cols=251 Identities=22% Similarity=0.292 Sum_probs=189.4
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccccC-----------
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACPE----------- 521 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~----------- 521 (801)
.+|...+.||.|+||.||+|... |..||+|.+..........+.+|+.++.+++||||+++++++..
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS 84 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence 57888899999999999999885 88999999876665556678899999999999999999987632
Q ss_pred -----CcceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecC-CCCeee
Q 003703 522 -----AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDS-ELSSKI 595 (801)
Q Consensus 522 -----~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~-~~~vKL 595 (801)
..++||||++ ++|.+.+.. ..+++..+..++.||+.||.|||+.+ |+||||||+||+++. ++.+||
T Consensus 85 ~~~~~~~~lv~e~~~-~~L~~~~~~----~~l~~~~~~~~~~qi~~aL~~LH~~g---ivH~dikp~Nili~~~~~~~kl 156 (342)
T cd07854 85 LTELNSVYIVQEYME-TDLANVLEQ----GPLSEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANVFINTEDLVLKI 156 (342)
T ss_pred ccccceEEEEeeccc-ccHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCceEEE
Confidence 2579999996 588877743 35788999999999999999999988 999999999999974 567899
Q ss_pred ecccceeeccCCCCcCCCccccCCCCCCCCCCCcccccc-CCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhh---
Q 003703 596 CDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVS--- 671 (801)
Q Consensus 596 ~DFGla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~-~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~--- 671 (801)
+|||+++.+....... .......|+..|+|||++.. ..++.++|||||||++|+|++|+.||...........
T Consensus 157 ~dfg~~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~ 233 (342)
T cd07854 157 GDFGLARIVDPHYSHK---GYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILE 233 (342)
T ss_pred CCcccceecCCccccc---cccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 9999998764321110 11123468889999997644 5688999999999999999999999964332211110
Q ss_pred cCc-------------ccc-cc-CCCCC-----CCCHHHHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 672 CGK-------------LSS-IL-DPLAG-----DWPTFVARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 672 ~g~-------------~~~-~~-d~~~~-----~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
... +.. .. +.... ......+..+.+|+.+||+.||.+||++.+.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell 298 (342)
T cd07854 234 SVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEAL 298 (342)
T ss_pred hcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHh
Confidence 000 000 00 00000 01112456788999999999999999998544
No 369
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.98 E-value=5.8e-32 Score=297.24 Aligned_cols=255 Identities=23% Similarity=0.282 Sum_probs=188.1
Q ss_pred Ccc-ccceeeecCceEEEEEEEC--CeEEEEEEeccCCccc--------------HHHHHHHHHHHhcCCCCceeeEecc
Q 003703 456 NFS-ESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQG--------------QLEFQQEVRVLSKLQHPHLVTLLGA 518 (801)
Q Consensus 456 ~f~-~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~--------------~~~f~~E~~il~~l~HpnIV~l~g~ 518 (801)
+|. ....||.|+||.||+|... |..||||.+....... ...+.+|+.++..++||||++++++
T Consensus 9 ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~ 88 (335)
T PTZ00024 9 RYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDV 88 (335)
T ss_pred chhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEE
Confidence 443 3456999999999999875 8899999986543221 1246789999999999999999998
Q ss_pred cc--CCcceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeee
Q 003703 519 CP--EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKIC 596 (801)
Q Consensus 519 ~~--~~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~ 596 (801)
+. +..++||||+. |+|.+++... ..+++.....++.|++.||.|||+.+ |+|+||+|+||+++.++.+||+
T Consensus 89 ~~~~~~~~lv~e~~~-~~l~~~l~~~---~~~~~~~~~~~~~ql~~aL~~LH~~~---i~H~dl~~~nill~~~~~~kl~ 161 (335)
T PTZ00024 89 YVEGDFINLVMDIMA-SDLKKVVDRK---IRLTESQVKCILLQILNGLNVLHKWY---FMHRDLSPANIFINSKGICKIA 161 (335)
T ss_pred EecCCcEEEEEeccc-cCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHeEECCCCCEEEC
Confidence 74 45789999996 6898888543 35788999999999999999999987 9999999999999999999999
Q ss_pred cccceeeccCCCCcC--------CCccccCCCCCCCCCCCccccccC-CCCcchhHHhHHHHHHHHHhCCCCCCChhHHH
Q 003703 597 DFGICRLVTEDTLYL--------PSFHRSTAPKGSFPYADPEYHRTG-VLTPKSDSYSFGLIILQLLTGRLPVGLAGEVR 667 (801)
Q Consensus 597 DFGla~~~~~~~~~~--------~~~~~~~~~~Gt~~Y~APE~~~~~-~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~ 667 (801)
|||++.......... ..........+++.|+|||++.+. .++.++|||||||++|+|+||++||...+...
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~ 241 (335)
T PTZ00024 162 DFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEID 241 (335)
T ss_pred CccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 999998765211100 001112234578899999988664 47899999999999999999999997544321
Q ss_pred HH------hhcCc---cccc--------cCCC----CCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHH
Q 003703 668 RA------VSCGK---LSSI--------LDPL----AGDWPTFVARRLVDLGLQCCELYGRERPDITPSLV 717 (801)
Q Consensus 668 ~~------~~~g~---~~~~--------~d~~----~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~ 717 (801)
.. +.... +... .... ........+..+.+++.+||+.+|.+||++.+.+.
T Consensus 242 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 312 (335)
T PTZ00024 242 QLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALK 312 (335)
T ss_pred HHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence 11 10000 0000 0000 00001123567899999999999999999985443
No 370
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.98 E-value=6.7e-33 Score=281.42 Aligned_cols=244 Identities=25% Similarity=0.354 Sum_probs=197.0
Q ss_pred HHhcCcccc-ceeeecCceEEEEEEEC--CeEEEEEEeccCCcccHHHHHHHHHHHhcC-CCCceeeEeccccC------
Q 003703 452 TATCNFSES-FKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKL-QHPHLVTLLGACPE------ 521 (801)
Q Consensus 452 ~at~~f~~~-~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~~~~f~~E~~il~~l-~HpnIV~l~g~~~~------ 521 (801)
..|++|+.. .+||-|-.|.|-.+..+ |..+|+|++... ....+|+++--.. .|||||.+++++..
T Consensus 58 ~itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rk 132 (400)
T KOG0604|consen 58 SITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQGRK 132 (400)
T ss_pred cchhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCce
Confidence 356777654 57999999999988664 899999998643 2245677665444 69999999998843
Q ss_pred CcceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecC---CCCeeeecc
Q 003703 522 AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDS---ELSSKICDF 598 (801)
Q Consensus 522 ~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~---~~~vKL~DF 598 (801)
.+.+|||+|+||.|...+..++. ..|+..++..|+.||+.|+.|||+.+ |.||||||+|+|... |..+||+||
T Consensus 133 cLLiVmE~meGGeLfsriq~~g~-~afTErea~eI~~qI~~Av~~lH~~n---IAHRDlKpENLLyt~t~~na~lKLtDf 208 (400)
T KOG0604|consen 133 CLLIVMECMEGGELFSRIQDRGD-QAFTEREASEIMKQIGLAVRYLHSMN---IAHRDLKPENLLYTTTSPNAPLKLTDF 208 (400)
T ss_pred eeEeeeecccchHHHHHHHHccc-ccchHHHHHHHHHHHHHHHHHHHhcc---hhhccCChhheeeecCCCCcceEeccc
Confidence 35689999999999999987654 56999999999999999999999998 999999999999964 456999999
Q ss_pred cceeeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCC------hhHHHHHhhc
Q 003703 599 GICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGL------AGEVRRAVSC 672 (801)
Q Consensus 599 Gla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~------~~~~~~~~~~ 672 (801)
|+|+.-.... ...+.+-||.|.|||++...+|+..+|+||+||++|-||+|.+||.. ...++..+..
T Consensus 209 GFAK~t~~~~-------~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~ 281 (400)
T KOG0604|consen 209 GFAKETQEPG-------DLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRT 281 (400)
T ss_pred ccccccCCCc-------cccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhc
Confidence 9999754322 23566789999999999999999999999999999999999999952 3345555655
Q ss_pred CccccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 673 GKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 673 g~~~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
|.+.- ...+|. .+++...++++.+|..+|.+|-|+.+.+
T Consensus 282 gqy~F----P~pEWs-~VSe~aKdlIR~LLkt~PteRlTI~~~m 320 (400)
T KOG0604|consen 282 GQYEF----PEPEWS-CVSEAAKDLIRKLLKTEPTERLTIEEVM 320 (400)
T ss_pred cCccC----CChhHh-HHHHHHHHHHHHHhcCCchhheeHHHhh
Confidence 54421 123443 4788999999999999999999988543
No 371
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=5.8e-32 Score=287.81 Aligned_cols=258 Identities=27% Similarity=0.398 Sum_probs=198.7
Q ss_pred cCccccceeeecCceEEEEEEECCeEEEEEEeccCCcccHHHHHHHHHHHhc--CCCCceeeEeccccC------Cccee
Q 003703 455 CNFSESFKVGQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSK--LQHPHLVTLLGACPE------AWSLV 526 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~g~~vAiK~l~~~~~~~~~~f~~E~~il~~--l~HpnIV~l~g~~~~------~~~LV 526 (801)
......+.||+|.||.||+|+++|..||||++.... ...+.+|.+|+.- |+|+||+.|+++-.. .++||
T Consensus 211 rqI~L~e~IGkGRyGEVwrG~wrGe~VAVKiF~srd---E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLv 287 (513)
T KOG2052|consen 211 RQIVLQEIIGKGRFGEVWRGRWRGEDVAVKIFSSRD---ERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLV 287 (513)
T ss_pred heeEEEEEecCccccceeeccccCCceEEEEecccc---hhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEe
Confidence 456667789999999999999999999999997543 3457778888765 599999999987521 36799
Q ss_pred eecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHh-----cCCCceeeCCCCCCCeeecCCCCeeeecccce
Q 003703 527 YEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHS-----SKPEKIVHGDLKPQNILLDSELSSKICDFGIC 601 (801)
Q Consensus 527 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~-----~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla 601 (801)
.+|-+.|||.|+|.+. .++....++++..+|.||++||. +|.+.|.|||||+.|||+..+|.+-|+|+|||
T Consensus 288 TdYHe~GSL~DyL~r~----tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLA 363 (513)
T KOG2052|consen 288 TDYHEHGSLYDYLNRN----TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 363 (513)
T ss_pred eecccCCcHHHHHhhc----cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceee
Confidence 9999999999999763 58889999999999999999995 45567999999999999999999999999999
Q ss_pred eeccCCCCcCCCccccCCCCCCCCCCCccccccCC----CC--cchhHHhHHHHHHHHHhC----------CCCCCC---
Q 003703 602 RLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGV----LT--PKSDSYSFGLIILQLLTG----------RLPVGL--- 662 (801)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~----~s--~ksDVwSlGvvL~ELltG----------~~Pf~~--- 662 (801)
-....+..... -.....+||-.|||||++...- +. ..+||||||.||||+.-. ++||..
T Consensus 364 v~h~~~t~~id--i~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp 441 (513)
T KOG2052|consen 364 VRHDSDTDTID--IPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVP 441 (513)
T ss_pred EEecccCCccc--CCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCC
Confidence 87665432221 1345678999999999986432 11 369999999999998763 356631
Q ss_pred ----hhHHHHHhhcCccccccCCCCCCCC-HHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHHhhh
Q 003703 663 ----AGEVRRAVSCGKLSSILDPLAGDWP-TFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHV 725 (801)
Q Consensus 663 ----~~~~~~~~~~g~~~~~~d~~~~~~~-~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~l~~ 725 (801)
.++++..+...++...+++ .|. ......+.+|+..||..||.-|-|.- -+.+.|..+..
T Consensus 442 ~DPs~eeMrkVVCv~~~RP~ipn---rW~s~~~l~~m~klMkeCW~~Np~aRltAL-riKKtl~~l~~ 505 (513)
T KOG2052|consen 442 SDPSFEEMRKVVCVQKLRPNIPN---RWKSDPALRVMAKLMKECWYANPAARLTAL-RIKKTLAKLSN 505 (513)
T ss_pred CCCCHHHHhcceeecccCCCCCc---ccccCHHHHHHHHHHHHhhcCCchhhhHHH-HHHHHHHHHhc
Confidence 1223333333333322222 232 34677899999999999999999987 67777776653
No 372
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.98 E-value=7.7e-32 Score=296.05 Aligned_cols=254 Identities=22% Similarity=0.245 Sum_probs=187.7
Q ss_pred CccccceeeecCceEEEEEEEC----CeEEEEEEeccCCc--ccHHHHHHHHHHHhcC-CCCceeeEecccc------CC
Q 003703 456 NFSESFKVGQGGFGCVYKGEML----GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKL-QHPHLVTLLGACP------EA 522 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~----g~~vAiK~l~~~~~--~~~~~f~~E~~il~~l-~HpnIV~l~g~~~------~~ 522 (801)
+|...+.||+|+||.||+++.. +..||||++..... .....+.+|+.++.++ .||||+++++.+. ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 4667788999999999999885 56899999864322 2234678899999999 5999999998642 23
Q ss_pred cceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeeccccee
Q 003703 523 WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR 602 (801)
Q Consensus 523 ~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~ 602 (801)
.+++++|+. ++|.+.+... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 81 ~~~~~e~~~-~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~g---ivH~dlkp~Nili~~~~~~kl~Dfg~a~ 153 (332)
T cd07857 81 LYLYEELME-ADLHQIIRSG---QPLTDAHFQSFIYQILCGLKYIHSAN---VLHRDLKPGNLLVNADCELKICDFGLAR 153 (332)
T ss_pred EEEEEeccc-CCHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHeEEcCCCCEEeCcCCCce
Confidence 567888885 6898888543 35889999999999999999999988 9999999999999999999999999998
Q ss_pred eccCCCCcCCCccccCCCCCCCCCCCcccccc-CCCCcchhHHhHHHHHHHHHhCCCCCCChhHH---HH----------
Q 003703 603 LVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEV---RR---------- 668 (801)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~-~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~---~~---------- 668 (801)
.+....... ........||+.|+|||++.+ ..++.++|||||||++|+|++|++||...+.. ..
T Consensus 154 ~~~~~~~~~--~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 231 (332)
T cd07857 154 GFSENPGEN--AGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDE 231 (332)
T ss_pred ecccccccc--cccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCH
Confidence 765432211 111234578999999998765 56899999999999999999999999643211 00
Q ss_pred ----HhhcCccccc---cC----CCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHH
Q 003703 669 ----AVSCGKLSSI---LD----PLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVK 718 (801)
Q Consensus 669 ----~~~~g~~~~~---~d----~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~ 718 (801)
.+........ .. ..........+..+.+|+.+||+.||.+||++.+.+.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~ 292 (332)
T cd07857 232 ETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEH 292 (332)
T ss_pred HHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 0000000000 00 00000011134678999999999999999999865433
No 373
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.98 E-value=1.7e-31 Score=279.60 Aligned_cols=230 Identities=28% Similarity=0.373 Sum_probs=190.2
Q ss_pred eeecCceEEEEEEEC--CeEEEEEEeccCCcc---cHHHHHHHHHHHhcCCCCceeeEeccccC--CcceeeecCCCCch
Q 003703 463 VGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ---GQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYLPNGSL 535 (801)
Q Consensus 463 LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~---~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E~~~~gsL 535 (801)
||.|+||.||++... +..||+|++...... ....+..|+.++.+++||||+++++.+.. ..++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 699999999999885 789999998765432 34468899999999999999999998854 46899999999999
Q ss_pred hhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCCCcc
Q 003703 536 QDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFH 615 (801)
Q Consensus 536 ~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~~~~ 615 (801)
.+++.... .+++.....++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++........
T Consensus 81 ~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lh~~~---~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~------ 148 (250)
T cd05123 81 FSHLSKEG---RFSEERARFYAAEIVLALEYLHSLG---IIYRDLKPENILLDADGHIKLTDFGLAKELSSEGS------ 148 (250)
T ss_pred HHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcceEEEcCCCcEEEeecCcceecccCCC------
Confidence 99986553 5889999999999999999999977 99999999999999999999999999987644321
Q ss_pred ccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhH--HHHHhhcCccccccCCCCCCCCHHHHHH
Q 003703 616 RSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE--VRRAVSCGKLSSILDPLAGDWPTFVARR 693 (801)
Q Consensus 616 ~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~--~~~~~~~g~~~~~~d~~~~~~~~~~~~~ 693 (801)
......|+..|++||.+.+...+.++|+||||+++|+|++|..||...+. ....+..+. ..++...+..
T Consensus 149 ~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 219 (250)
T cd05123 149 RTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDP---------LRFPEFLSPE 219 (250)
T ss_pred cccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCC---------CCCCCCCCHH
Confidence 13455689999999999888899999999999999999999999975442 111111111 1233334678
Q ss_pred HHHHHHHhhhhCCCCCCCch
Q 003703 694 LVDLGLQCCELYGRERPDIT 713 (801)
Q Consensus 694 l~~Li~~Cl~~dP~~RPt~~ 713 (801)
+.+++.+||..||.+||++.
T Consensus 220 l~~~i~~~l~~~p~~R~~~~ 239 (250)
T cd05123 220 ARDLISGLLQKDPTKRLGSG 239 (250)
T ss_pred HHHHHHHHhcCCHhhCCCcc
Confidence 89999999999999999995
No 374
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.97 E-value=4.4e-32 Score=299.55 Aligned_cols=248 Identities=25% Similarity=0.307 Sum_probs=190.7
Q ss_pred HHhcCccccceeeecCceEEEEEEEC--CeEEEEEEeccCC--cccHHHHHHHHHHHhcCCCCceeeEeccccC--C---
Q 003703 452 TATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHN--MQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--A--- 522 (801)
Q Consensus 452 ~at~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~--~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~--- 522 (801)
...++|.....||+|+||.||+|... +..||||++.... ......+.+|+.++++++||||+++++++.. .
T Consensus 12 ~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07851 12 EVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLED 91 (343)
T ss_pred cccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccc
Confidence 34678888999999999999999885 7899999986532 2233457789999999999999999887632 2
Q ss_pred ---cceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeeccc
Q 003703 523 ---WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFG 599 (801)
Q Consensus 523 ---~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFG 599 (801)
.++|+||+ +++|.+++.. ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||
T Consensus 92 ~~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nill~~~~~~kL~dfg 163 (343)
T cd07851 92 FQDVYLVTHLM-GADLNNIVKC----QKLSDDHIQFLVYQILRGLKYIHSAG---IIHRDLKPSNIAVNEDCELKILDFG 163 (343)
T ss_pred cccEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEcccc
Confidence 67999998 6799888854 35899999999999999999999987 9999999999999999999999999
Q ss_pred ceeeccCCCCcCCCccccCCCCCCCCCCCcccccc-CCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHH---hhc-Cc
Q 003703 600 ICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRA---VSC-GK 674 (801)
Q Consensus 600 la~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~-~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~---~~~-g~ 674 (801)
++...... .....+|+.|+|||.+.+ ..++.++|||||||++|+|+||+.||......... ... +.
T Consensus 164 ~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~ 234 (343)
T cd07851 164 LARHTDDE---------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGT 234 (343)
T ss_pred cccccccc---------ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCC
Confidence 99865432 233468889999998765 46789999999999999999999999643322111 000 00
Q ss_pred c-cc------------ccCCC----CCCC---CHHHHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 675 L-SS------------ILDPL----AGDW---PTFVARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 675 ~-~~------------~~d~~----~~~~---~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
. .. .+... ...+ ....+..+.+++.+||+.+|.+|||+.+.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell 296 (343)
T cd07851 235 PDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEAL 296 (343)
T ss_pred CCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHh
Confidence 0 00 00000 0000 112366899999999999999999998543
No 375
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=2.1e-32 Score=279.49 Aligned_cols=251 Identities=24% Similarity=0.379 Sum_probs=198.9
Q ss_pred HHHHHHHhcCccccceeeecCceEEEEEEE--CCeEEEEEEeccCCcccHHHHHHHHHHHhcC-CCCceeeEeccccC--
Q 003703 447 LADLQTATCNFSESFKVGQGGFGCVYKGEM--LGRTVAIKMLYSHNMQGQLEFQQEVRVLSKL-QHPHLVTLLGACPE-- 521 (801)
Q Consensus 447 ~~el~~at~~f~~~~~LG~G~fG~Vy~g~~--~g~~vAiK~l~~~~~~~~~~f~~E~~il~~l-~HpnIV~l~g~~~~-- 521 (801)
+.|+-..|. ..||+|+||.|-.+.. .|..||||++.+........+.+|++++... .|+||++|+.+|.+
T Consensus 75 F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~ 149 (463)
T KOG0607|consen 75 FEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDT 149 (463)
T ss_pred HHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccc
Confidence 667766665 4699999999998765 4899999999888777778899999999998 59999999999965
Q ss_pred CcceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCC---Ceeeecc
Q 003703 522 AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSEL---SSKICDF 598 (801)
Q Consensus 522 ~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~---~vKL~DF 598 (801)
..|||||.|.||+|..+|..+. .|+..++.++..+|+.||.|||..+ |.||||||+|||-.... -+|||||
T Consensus 150 ~FYLVfEKm~GGplLshI~~~~---~F~E~EAs~vvkdia~aLdFlH~kg---IAHRDlKPENiLC~~pn~vsPvKiCDf 223 (463)
T KOG0607|consen 150 RFYLVFEKMRGGPLLSHIQKRK---HFNEREASRVVKDIASALDFLHTKG---IAHRDLKPENILCESPNKVSPVKICDF 223 (463)
T ss_pred eEEEEEecccCchHHHHHHHhh---hccHHHHHHHHHHHHHHHHHHhhcC---cccccCCccceeecCCCCcCceeeecc
Confidence 4899999999999999998765 5788999999999999999999988 99999999999997654 4899999
Q ss_pred cceeeccCCCCcCC-CccccCCCCCCCCCCCccccc-----cCCCCcchhHHhHHHHHHHHHhCCCCCCChh--------
Q 003703 599 GICRLVTEDTLYLP-SFHRSTAPKGSFPYADPEYHR-----TGVLTPKSDSYSFGLIILQLLTGRLPVGLAG-------- 664 (801)
Q Consensus 599 Gla~~~~~~~~~~~-~~~~~~~~~Gt~~Y~APE~~~-----~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~-------- 664 (801)
.|..-+.......+ +.-...+++|+..|||||+.. ...|+.++|.||||||||-||+|++||...-
T Consensus 224 DLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdr 303 (463)
T KOG0607|consen 224 DLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDR 303 (463)
T ss_pred ccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccC
Confidence 88765443222212 222345778999999999642 3468999999999999999999999995211
Q ss_pred ---------HHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCch
Q 003703 665 ---------EVRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDIT 713 (801)
Q Consensus 665 ---------~~~~~~~~g~~~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~ 713 (801)
.....+.+|++.- . -.+|- .++....+|+...+..++.+|-+..
T Consensus 304 Ge~Cr~CQ~~LFesIQEGkYeF-P---dkdWa-hIS~eakdlisnLlvrda~~rlsa~ 356 (463)
T KOG0607|consen 304 GEVCRVCQNKLFESIQEGKYEF-P---DKDWA-HISSEAKDLISNLLVRDAKQRLSAA 356 (463)
T ss_pred CCccHHHHHHHHHHHhccCCcC-C---hhhhH-HhhHHHHHHHHHHHhccHHhhhhhh
Confidence 1233455555421 1 12333 3677788899999999999998876
No 376
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.97 E-value=1.2e-31 Score=280.04 Aligned_cols=218 Identities=24% Similarity=0.201 Sum_probs=175.9
Q ss_pred cCceEEEEEEEC--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccccC--CcceeeecCCCCchhhhhhh
Q 003703 466 GGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYLPNGSLQDRLFR 541 (801)
Q Consensus 466 G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E~~~~gsL~~~L~~ 541 (801)
|.||.||++++. |+.||+|++.... .+.+|...+....||||+++++++.+ ..++||||+++|+|.+++..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 899999999884 8899999986643 23445556666679999999998843 57899999999999998865
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCCCccccCCCC
Q 003703 542 KSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPK 621 (801)
Q Consensus 542 ~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~ 621 (801)
.. .+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.++|+|||++....... ....
T Consensus 79 ~~---~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~---------~~~~ 143 (237)
T cd05576 79 FL---NIPEECVKRWAAEMVVALDALHREG---IVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSC---------DGEA 143 (237)
T ss_pred hc---CCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEEcCCCCEEEecccchhcccccc---------ccCC
Confidence 43 5889999999999999999999987 9999999999999999999999999886654321 2334
Q ss_pred CCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHh
Q 003703 622 GSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQC 701 (801)
Q Consensus 622 Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~g~~~~~~d~~~~~~~~~~~~~l~~Li~~C 701 (801)
++..|+|||++.+..++.++|||||||++|||++|+.|+...... + ........|...+..+.+++.+|
T Consensus 144 ~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~---~--------~~~~~~~~~~~~~~~~~~li~~~ 212 (237)
T cd05576 144 VENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG---I--------NTHTTLNIPEWVSEEARSLLQQL 212 (237)
T ss_pred cCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh---c--------ccccccCCcccCCHHHHHHHHHH
Confidence 677899999998888999999999999999999999887532211 0 00001123344567889999999
Q ss_pred hhhCCCCCCCchH
Q 003703 702 CELYGRERPDITP 714 (801)
Q Consensus 702 l~~dP~~RPt~~e 714 (801)
++.||.+||++.+
T Consensus 213 l~~dp~~R~~~~~ 225 (237)
T cd05576 213 LQFNPTERLGAGV 225 (237)
T ss_pred ccCCHHHhcCCCc
Confidence 9999999999853
No 377
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.97 E-value=1.2e-32 Score=295.84 Aligned_cols=238 Identities=29% Similarity=0.439 Sum_probs=197.8
Q ss_pred cceeeecCceEEEEEEEC--CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEeccc--cCCcceeeecCCCC
Q 003703 460 SFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGAC--PEAWSLVYEYLPNG 533 (801)
Q Consensus 460 ~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~--~~~~~f~~E~~il~~l~HpnIV~l~g~~--~~~~~LV~E~~~~g 533 (801)
++.||.|.||+||-|+++ |+.||||++.+... .....+.+|+.||..++||.||.|-.-| ++..++|||.+.|.
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GD 648 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGD 648 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcch
Confidence 468999999999999875 99999999976543 3345689999999999999999998777 45688999999666
Q ss_pred chhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCC---CCeeeecccceeeccCCCCc
Q 003703 534 SLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSE---LSSKICDFGICRLVTEDTLY 610 (801)
Q Consensus 534 sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~---~~vKL~DFGla~~~~~~~~~ 610 (801)
-|+-+|.... +.|+......++.||+.||.|||..+ |+|+||||+||||... -.+||||||+|+.+.+..
T Consensus 649 MLEMILSsEk--gRL~er~TkFlvtQIL~ALr~LH~kn---IvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEks-- 721 (888)
T KOG4236|consen 649 MLEMILSSEK--GRLPERITKFLVTQILVALRYLHFKN---IVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKS-- 721 (888)
T ss_pred HHHHHHHhhc--ccchHHHHHHHHHHHHHHHHHhhhcc---eeeccCCchheeeccCCCCCceeeccccceeecchhh--
Confidence 6666665443 46888888888999999999999988 9999999999999654 459999999999987654
Q ss_pred CCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhhcCccccccCCCCCCCCHHH
Q 003703 611 LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFV 690 (801)
Q Consensus 611 ~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~g~~~~~~d~~~~~~~~~~ 690 (801)
.....+|||.|+|||++...+|...-|+||.|||+|--|+|..||...+++.+.+....+.-... .| .++
T Consensus 722 -----FRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNAaFMyPp~----PW-~ei 791 (888)
T KOG4236|consen 722 -----FRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAAFMYPPN----PW-SEI 791 (888)
T ss_pred -----hhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhhccccccCCC----ch-hhc
Confidence 34678999999999999999999999999999999999999999998887777766554432211 23 246
Q ss_pred HHHHHHHHHHhhhhCCCCCCCchH
Q 003703 691 ARRLVDLGLQCCELYGRERPDITP 714 (801)
Q Consensus 691 ~~~l~~Li~~Cl~~dP~~RPt~~e 714 (801)
+...++||...|+..-.+|-+...
T Consensus 792 s~~AidlIn~LLqVkm~kRysvdk 815 (888)
T KOG4236|consen 792 SPEAIDLINNLLQVKMRKRYSVDK 815 (888)
T ss_pred CHHHHHHHHHHHHHHHHHhcchHh
Confidence 678889999999998888887664
No 378
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.9e-31 Score=314.11 Aligned_cols=255 Identities=31% Similarity=0.478 Sum_probs=207.9
Q ss_pred HHhcCccccceeeecCceEEEEEEEC---------CeEEEEEEeccCCcc-cHHHHHHHHHHHhcC-CCCceeeEecccc
Q 003703 452 TATCNFSESFKVGQGGFGCVYKGEML---------GRTVAIKMLYSHNMQ-GQLEFQQEVRVLSKL-QHPHLVTLLGACP 520 (801)
Q Consensus 452 ~at~~f~~~~~LG~G~fG~Vy~g~~~---------g~~vAiK~l~~~~~~-~~~~f~~E~~il~~l-~HpnIV~l~g~~~ 520 (801)
...++....+.||+|.||.|++|... ...||||.++..... ....+..|+.+|..+ +|||||.++|+|.
T Consensus 293 ~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t 372 (609)
T KOG0200|consen 293 IPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACT 372 (609)
T ss_pred echhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeec
Confidence 33444455558999999999999764 346999999866544 455799999999999 6999999999995
Q ss_pred C--CcceeeecCCCCchhhhhhhcC-----CC--------CCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCe
Q 003703 521 E--AWSLVYEYLPNGSLQDRLFRKS-----NV--------SPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNI 585 (801)
Q Consensus 521 ~--~~~LV~E~~~~gsL~~~L~~~~-----~~--------~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NI 585 (801)
. ..++|+||+..|+|.++|..+. .. ..++....+.++.|||.|++||++.. +|||||-..||
T Consensus 373 ~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~---~vHRDLAaRNV 449 (609)
T KOG0200|consen 373 QDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVP---CVHRDLAARNV 449 (609)
T ss_pred cCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCC---ccchhhhhhhE
Confidence 5 5789999999999999998765 01 23888999999999999999999977 99999999999
Q ss_pred eecCCCCeeeecccceeeccCCCCcCCCccccCCCCCC--CCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCC
Q 003703 586 LLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGS--FPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGL 662 (801)
Q Consensus 586 LLd~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~Gt--~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~ 662 (801)
|+..+..+||+|||+|+...+...+ ......|| ..|||||.+....|+.++|||||||+||||+| |..||..
T Consensus 450 Li~~~~~~kIaDFGlar~~~~~~~y-----~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~ 524 (609)
T KOG0200|consen 450 LITKNKVIKIADFGLARDHYNKDYY-----RTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPG 524 (609)
T ss_pred EecCCCEEEEccccceeccCCCCce-----EecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCC
Confidence 9999999999999999976654432 22222332 34999999999999999999999999999999 8999975
Q ss_pred ---hhHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHHh
Q 003703 663 ---AGEVRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 723 (801)
Q Consensus 663 ---~~~~~~~~~~g~~~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~l 723 (801)
...+...+..|... ..|.....++.++++.||+.+|.+||++. +++..|+..
T Consensus 525 ~~~~~~l~~~l~~G~r~--------~~P~~c~~eiY~iM~~CW~~~p~~RP~F~-~~~~~~~~~ 579 (609)
T KOG0200|consen 525 IPPTEELLEFLKEGNRM--------EQPEHCSDEIYDLMKSCWNADPEDRPTFS-ECVEFFEKH 579 (609)
T ss_pred CCcHHHHHHHHhcCCCC--------CCCCCCCHHHHHHHHHHhCCCcccCCCHH-HHHHHHHHH
Confidence 34455566666543 23555677899999999999999999999 788888763
No 379
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.97 E-value=4.3e-31 Score=315.36 Aligned_cols=143 Identities=29% Similarity=0.405 Sum_probs=126.0
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcc---cHHHHHHHHHHHhcCCCCceeeEecccc--CCcceee
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ---GQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVY 527 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~---~~~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~LV~ 527 (801)
++|....+||+|+||.||+|.+. +..||||++...... ....+..|+.++..++||||+++++++. ...+|||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 56888899999999999999987 899999999764332 2346889999999999999999998874 4578999
Q ss_pred ecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceee
Q 003703 528 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRL 603 (801)
Q Consensus 528 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~ 603 (801)
||+.+++|.+++.... .+++..++.|+.||+.||.|||..+ ||||||||+||||+.++.+||+|||+++.
T Consensus 84 Ey~~g~~L~~li~~~~---~l~~~~~~~i~~qil~aL~yLH~~g---IiHrDLKP~NILl~~~g~vkL~DFGls~~ 153 (669)
T cd05610 84 EYLIGGDVKSLLHIYG---YFDEEMAVKYISEVALALDYLHRHG---IIHRDLKPDNMLISNEGHIKLTDFGLSKV 153 (669)
T ss_pred eCCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCccHHHEEEcCCCCEEEEeCCCCcc
Confidence 9999999999986543 5788999999999999999999987 99999999999999999999999999863
No 380
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=2.9e-31 Score=301.87 Aligned_cols=257 Identities=26% Similarity=0.370 Sum_probs=211.7
Q ss_pred CHHHHHHHhcCccccceeeecCceEEEEEEE--CCeEEEEEEeccCCcccHHHHHHHHHHHhcC-CCCceeeEeccc---
Q 003703 446 SLADLQTATCNFSESFKVGQGGFGCVYKGEM--LGRTVAIKMLYSHNMQGQLEFQQEVRVLSKL-QHPHLVTLLGAC--- 519 (801)
Q Consensus 446 ~~~el~~at~~f~~~~~LG~G~fG~Vy~g~~--~g~~vAiK~l~~~~~~~~~~f~~E~~il~~l-~HpnIV~l~g~~--- 519 (801)
.++.+..-+..|.+...||.|.||.||+++. .|+.+|+|++..... ...++..|.++|... .|||++.+||++
T Consensus 10 ~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d-~deEiE~eynil~~~~~hpnv~~fyg~~~k~ 88 (953)
T KOG0587|consen 10 DLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTED-EEEEIELEYNMLKKYSHHPNVATFYGAFIKK 88 (953)
T ss_pred chhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcc-ccHHHHHHHHHHHhccCCCCcceEEEEEEEe
Confidence 3444555667888889999999999998866 489999999876543 345677899999988 699999999987
Q ss_pred ----cCCcceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeee
Q 003703 520 ----PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKI 595 (801)
Q Consensus 520 ----~~~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL 595 (801)
.+.+.||||||.+||..|++..-. ...+.|..+..|+..++.||.+||.+. +||||||-.||||+.++.|||
T Consensus 89 ~~~~~DqLWLVMEfC~gGSVTDLVKn~~-g~rl~E~~IaYI~re~lrgl~HLH~nk---viHRDikG~NiLLT~e~~VKL 164 (953)
T KOG0587|consen 89 DPGNGDQLWLVMEFCGGGSVTDLVKNTK-GNRLKEEWIAYILREILRGLAHLHNNK---VIHRDIKGQNVLLTENAEVKL 164 (953)
T ss_pred cCCCCCeEEEEeeccCCccHHHHHhhhc-ccchhhHHHHHHHHHHHHHHHHHhhcc---eeeecccCceEEEeccCcEEE
Confidence 345889999999999999887655 577999999999999999999999988 999999999999999999999
Q ss_pred ecccceeeccCCCCcCCCccccCCCCCCCCCCCcccccc-----CCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHh
Q 003703 596 CDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT-----GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAV 670 (801)
Q Consensus 596 ~DFGla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~-----~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~ 670 (801)
+|||++..+.... .+..+..|||.|||||++.- ..|+..+|+||||++..||--|.+|+.....++.++
T Consensus 165 vDFGvSaQldsT~------grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF 238 (953)
T KOG0587|consen 165 VDFGVSAQLDSTV------GRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALF 238 (953)
T ss_pred eeeeeeeeeeccc------ccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhc
Confidence 9999998775432 34567789999999998853 347789999999999999999999998777666554
Q ss_pred hcCccccccCCC-CCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHH
Q 003703 671 SCGKLSSILDPL-AGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVK 718 (801)
Q Consensus 671 ~~g~~~~~~d~~-~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~ 718 (801)
.... .|. ...-|...+.++.++|..|+..|...||++.+.+.+
T Consensus 239 ~IpR-----NPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h 282 (953)
T KOG0587|consen 239 LIPR-----NPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKH 282 (953)
T ss_pred cCCC-----CCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccC
Confidence 3221 121 122356678899999999999999999999865543
No 381
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=7.7e-32 Score=276.16 Aligned_cols=247 Identities=22% Similarity=0.274 Sum_probs=194.2
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCccc---HHHHHHHHHHHhcC-CCCceeeEeccccC--Cccee
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQG---QLEFQQEVRVLSKL-QHPHLVTLLGACPE--AWSLV 526 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~---~~~f~~E~~il~~l-~HpnIV~l~g~~~~--~~~LV 526 (801)
++|....+||+|+|+.|..+++. .+.+|+|++++.-... ..=.+.|-.+..+. +||.+|-|..+|.. .+++|
T Consensus 250 ~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffv 329 (593)
T KOG0695|consen 250 QDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFV 329 (593)
T ss_pred ccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEE
Confidence 46778889999999999999885 6889999987653322 22255677777766 79999999999854 47889
Q ss_pred eecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccC
Q 003703 527 YEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTE 606 (801)
Q Consensus 527 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~ 606 (801)
.||++||+|.-++.+.. .|+.+.+..+...|+.||.|||+.+ ||.||||.+|||||..|++||.|||+++.--.
T Consensus 330 ieyv~ggdlmfhmqrqr---klpeeharfys~ei~lal~flh~rg---iiyrdlkldnvlldaeghikltdygmcke~l~ 403 (593)
T KOG0695|consen 330 IEYVNGGDLMFHMQRQR---KLPEEHARFYSAEICLALNFLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLG 403 (593)
T ss_pred EEEecCcceeeehhhhh---cCcHHHhhhhhHHHHHHHHHHhhcC---eeeeeccccceEEccCCceeecccchhhcCCC
Confidence 99999999998887654 5788888889999999999999988 99999999999999999999999999986543
Q ss_pred CCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHH-HHhhcCccccccCCCCCC
Q 003703 607 DTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVR-RAVSCGKLSSILDPLAGD 685 (801)
Q Consensus 607 ~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~-~~~~~g~~~~~~d~~~~~ 685 (801)
+.. .+.+.+|||.|+|||++.+..|+..+|+|+|||+|+||+.|+.||+.+..-. ....+..+.+++-.....
T Consensus 404 ~gd------~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqir 477 (593)
T KOG0695|consen 404 PGD------TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIR 477 (593)
T ss_pred CCc------ccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhccc
Confidence 322 3467899999999999999999999999999999999999999997443100 000011112222222223
Q ss_pred CCHHHHHHHHHHHHHhhhhCCCCCCCch
Q 003703 686 WPTFVARRLVDLGLQCCELYGRERPDIT 713 (801)
Q Consensus 686 ~~~~~~~~l~~Li~~Cl~~dP~~RPt~~ 713 (801)
.|...+-....+...-+++||++|-.-.
T Consensus 478 iprslsvkas~vlkgflnkdp~erlgc~ 505 (593)
T KOG0695|consen 478 IPRSLSVKASHVLKGFLNKDPKERLGCR 505 (593)
T ss_pred ccceeehhhHHHHHHhhcCCcHHhcCCC
Confidence 4555666778888899999999986543
No 382
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.3e-31 Score=295.85 Aligned_cols=237 Identities=25% Similarity=0.330 Sum_probs=192.4
Q ss_pred hcCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcccHHHHHHHHHHHhcC-CCCceeeEeccccC--Ccceeee
Q 003703 454 TCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKL-QHPHLVTLLGACPE--AWSLVYE 528 (801)
Q Consensus 454 t~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~~~~f~~E~~il~~l-~HpnIV~l~g~~~~--~~~LV~E 528 (801)
+..|.....||.|+|+.|-.+... +...++|++.....+ ..+|+.++... +||||+++.+.|.+ +.++|||
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~~----~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e 396 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRADD----NQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVME 396 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheeccccccc----cccccchhhhhcCCCcceeecceecCCceeeeeeh
Confidence 556666777999999999998775 788999999766333 23577666666 79999999999965 4789999
Q ss_pred cCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeee-cCCCCeeeecccceeeccCC
Q 003703 529 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILL-DSELSSKICDFGICRLVTED 607 (801)
Q Consensus 529 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILL-d~~~~vKL~DFGla~~~~~~ 607 (801)
++.||-|.+.+..... +. ..+..|+.+|+.|+.|||.++ ||||||||+|||+ +..++++|+|||.++.....
T Consensus 397 ~l~g~ell~ri~~~~~---~~-~e~~~w~~~lv~Av~~LH~~g---vvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~ 469 (612)
T KOG0603|consen 397 LLDGGELLRRIRSKPE---FC-SEASQWAAELVSAVDYLHEQG---VVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS 469 (612)
T ss_pred hccccHHHHHHHhcch---hH-HHHHHHHHHHHHHHHHHHhcC---eeecCCChhheeecCCCCcEEEEEechhhhCchh
Confidence 9999988887765432 22 677789999999999999987 9999999999999 68999999999999987654
Q ss_pred CCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChh---HHHHHhhcCccccccCCCCC
Q 003703 608 TLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAG---EVRRAVSCGKLSSILDPLAG 684 (801)
Q Consensus 608 ~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~---~~~~~~~~g~~~~~~d~~~~ 684 (801)
....+=|..|.|||++....|+++|||||||++||+||+|+.||.... .+...+..+.+
T Consensus 470 ---------~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~~~~~--------- 531 (612)
T KOG0603|consen 470 ---------CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQMPKF--------- 531 (612)
T ss_pred ---------hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhhcCCcc---------
Confidence 123456889999999999999999999999999999999999996322 23333333332
Q ss_pred CCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHH
Q 003703 685 DWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELE 721 (801)
Q Consensus 685 ~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~ 721 (801)
...++....+|+.+||+.||.+||++.+...+.+.
T Consensus 532 --s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 532 --SECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWF 566 (612)
T ss_pred --ccccCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence 25577889999999999999999999976655554
No 383
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.97 E-value=1.7e-31 Score=272.14 Aligned_cols=199 Identities=25% Similarity=0.330 Sum_probs=163.6
Q ss_pred CccccceeeecCceEEEEEEEC------CeEEEEEEeccCCcc--cHHHHHHHHHHHhcCCCCceeeEeccccC---Ccc
Q 003703 456 NFSESFKVGQGGFGCVYKGEML------GRTVAIKMLYSHNMQ--GQLEFQQEVRVLSKLQHPHLVTLLGACPE---AWS 524 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~------g~~vAiK~l~~~~~~--~~~~f~~E~~il~~l~HpnIV~l~g~~~~---~~~ 524 (801)
.|.....||+|.||.||++.-. ...+|||.++..... -.....+|+.+++.++|||||.|..+|.. ..+
T Consensus 25 ~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v~ 104 (438)
T KOG0666|consen 25 EYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKVW 104 (438)
T ss_pred HhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceEE
Confidence 4666778999999999999543 237999998765322 22346789999999999999999988743 467
Q ss_pred eeeecCCCCchhhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCC----CCeeeecc
Q 003703 525 LVYEYLPNGSLQDRLFRKS--NVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSE----LSSKICDF 598 (801)
Q Consensus 525 LV~E~~~~gsL~~~L~~~~--~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~----~~vKL~DF 598 (801)
|++||.+ .+|..+++.+. ....++-..+..|+.||+.|+.|||++. |+||||||.|||+..+ |.|||+||
T Consensus 105 l~fdYAE-hDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NW---vlHRDLKPaNIlvmgdgperG~VKIaDl 180 (438)
T KOG0666|consen 105 LLFDYAE-HDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNW---VLHRDLKPANILVMGDGPERGRVKIADL 180 (438)
T ss_pred EEehhhh-hhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhh---eeeccCCcceEEEeccCCccCeeEeecc
Confidence 9999984 58888876543 2356888999999999999999999988 9999999999999887 89999999
Q ss_pred cceeeccCCCCcCCCccccCCCCCCCCCCCccccccC-CCCcchhHHhHHHHHHHHHhCCCCCC
Q 003703 599 GICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTG-VLTPKSDSYSFGLIILQLLTGRLPVG 661 (801)
Q Consensus 599 Gla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~-~~s~ksDVwSlGvvL~ELltG~~Pf~ 661 (801)
|+++.+...... ......++-|+.|.|||.+.+. .||++.|||+.|||+.||||-.+-|.
T Consensus 181 GlaR~~~~plkp---l~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~ 241 (438)
T KOG0666|consen 181 GLARLFNNPLKP---LASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFK 241 (438)
T ss_pred cHHHHhhccccc---cccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCcccc
Confidence 999998754322 2234567789999999988764 69999999999999999999988774
No 384
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.97 E-value=1.7e-29 Score=261.18 Aligned_cols=231 Identities=29% Similarity=0.382 Sum_probs=188.3
Q ss_pred CceEEEEEEEC--CeEEEEEEeccCCccc-HHHHHHHHHHHhcCCCCceeeEecccc--CCcceeeecCCCCchhhhhhh
Q 003703 467 GFGCVYKGEML--GRTVAIKMLYSHNMQG-QLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYLPNGSLQDRLFR 541 (801)
Q Consensus 467 ~fG~Vy~g~~~--g~~vAiK~l~~~~~~~-~~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~LV~E~~~~gsL~~~L~~ 541 (801)
+||.||+|... |..||+|++....... ...+.+|+..+++++|+||+++++++. ...+++|||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 68999999986 6899999997765544 678999999999999999999999985 457899999999999998865
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCCCccccCCCC
Q 003703 542 KSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPK 621 (801)
Q Consensus 542 ~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~ 621 (801)
.. .+++..++.++.+++.+|.|||..+ ++|+||+|+||+++.++.++|+|||++....... ......
T Consensus 81 ~~---~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~-------~~~~~~ 147 (244)
T smart00220 81 RG---RLSEDEARFYARQILSALEYLHSNG---IIHRDLKPENILLDEDGHVKLADFGLARQLDPGG-------LLTTFV 147 (244)
T ss_pred cc---CCCHHHHHHHHHHHHHHHHHHHHcC---eecCCcCHHHeEECCCCcEEEccccceeeecccc-------cccccc
Confidence 43 2788999999999999999999987 9999999999999999999999999998875432 223456
Q ss_pred CCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhH---HHHHhhcCccccccCCCCCCCCHHHHHHHHHHH
Q 003703 622 GSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE---VRRAVSCGKLSSILDPLAGDWPTFVARRLVDLG 698 (801)
Q Consensus 622 Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~---~~~~~~~g~~~~~~d~~~~~~~~~~~~~l~~Li 698 (801)
|+..|++||.+....++.++||||||+++|+|++|..||..... .......+.... .......+..+.+++
T Consensus 148 ~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~i 221 (244)
T smart00220 148 GTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPF------PPPEWKISPEAKDLI 221 (244)
T ss_pred CCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCC------ccccccCCHHHHHHH
Confidence 88999999999888899999999999999999999999965222 222222221110 000000456899999
Q ss_pred HHhhhhCCCCCCCchHHH
Q 003703 699 LQCCELYGRERPDITPSL 716 (801)
Q Consensus 699 ~~Cl~~dP~~RPt~~e~l 716 (801)
.+|+..+|.+||++.+.+
T Consensus 222 ~~~l~~~p~~Rp~~~~~~ 239 (244)
T smart00220 222 RKLLVKDPEKRLTAEEAL 239 (244)
T ss_pred HHHccCCchhccCHHHHh
Confidence 999999999999998533
No 385
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.96 E-value=1.5e-29 Score=288.77 Aligned_cols=256 Identities=21% Similarity=0.242 Sum_probs=179.0
Q ss_pred HhcCccccceeeecCceEEEEEEE------------------CCeEEEEEEeccCCcccHHH--------------HHHH
Q 003703 453 ATCNFSESFKVGQGGFGCVYKGEM------------------LGRTVAIKMLYSHNMQGQLE--------------FQQE 500 (801)
Q Consensus 453 at~~f~~~~~LG~G~fG~Vy~g~~------------------~g~~vAiK~l~~~~~~~~~~--------------f~~E 500 (801)
.+++|...++||+|+||.||+|.+ .++.||||++.......... +..|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 467899999999999999999964 24679999986543322222 3347
Q ss_pred HHHHhcCCCCce-----eeEecccc----------CCcceeeecCCCCchhhhhhhcCC---------------------
Q 003703 501 VRVLSKLQHPHL-----VTLLGACP----------EAWSLVYEYLPNGSLQDRLFRKSN--------------------- 544 (801)
Q Consensus 501 ~~il~~l~HpnI-----V~l~g~~~----------~~~~LV~E~~~~gsL~~~L~~~~~--------------------- 544 (801)
+.++.+++|.|+ +.++|+|. ...+|||||+++|+|.++|+....
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777778876654 66777763 236799999999999998875321
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCCCccccCCCCCCC
Q 003703 545 VSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSF 624 (801)
Q Consensus 545 ~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~Gt~ 624 (801)
...++|..+..|+.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++......... ......+|+
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~~---ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~-----~~~~g~~tp 374 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRIG---IVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINF-----NPLYGMLDP 374 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCchHhEEECCCCcEEEEeCcCccccccCCcc-----CccccCCCc
Confidence 123567889999999999999999987 999999999999999999999999999765432211 122334589
Q ss_pred CCCCccccccCC--------------------C--CcchhHHhHHHHHHHHHhCCC-CCCChhHHHHHhhc--Cccc--c
Q 003703 625 PYADPEYHRTGV--------------------L--TPKSDSYSFGLIILQLLTGRL-PVGLAGEVRRAVSC--GKLS--S 677 (801)
Q Consensus 625 ~Y~APE~~~~~~--------------------~--s~ksDVwSlGvvL~ELltG~~-Pf~~~~~~~~~~~~--g~~~--~ 677 (801)
.|+|||.+.... | ..+.||||+||++|+|++|.. ||............ ..+. .
T Consensus 375 ~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r 454 (507)
T PLN03224 375 RYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWR 454 (507)
T ss_pred ceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHH
Confidence 999999875432 1 235799999999999999985 76532211111100 0000 0
Q ss_pred ccCCCCCCC--CHHHHHHHHHHHHHhhhhCC---CCCCCchHHH
Q 003703 678 ILDPLAGDW--PTFVARRLVDLGLQCCELYG---RERPDITPSL 716 (801)
Q Consensus 678 ~~d~~~~~~--~~~~~~~l~~Li~~Cl~~dP---~~RPt~~e~l 716 (801)
.......++ ....+....+|+.+++..+| .+|+|+.+.+
T Consensus 455 ~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL 498 (507)
T PLN03224 455 MYKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQAL 498 (507)
T ss_pred hhcccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHh
Confidence 000000111 12245678999999999766 6899998544
No 386
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.96 E-value=2.1e-29 Score=294.17 Aligned_cols=254 Identities=24% Similarity=0.224 Sum_probs=166.6
Q ss_pred HhcCccccceeeecCceEEEEEEEC------CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEecc--------
Q 003703 453 ATCNFSESFKVGQGGFGCVYKGEML------GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGA-------- 518 (801)
Q Consensus 453 at~~f~~~~~LG~G~fG~Vy~g~~~------g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~-------- 518 (801)
..++|...+.||+|+||.||+|++. +..||+|++..... ...+..+ .+....+.+++.++..
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--VEIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--hHHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 4678999999999999999999884 57899998764321 1111111 1222223333333222
Q ss_pred ccCCcceeeecCCCCchhhhhhhcCCC-----------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCC
Q 003703 519 CPEAWSLVYEYLPNGSLQDRLFRKSNV-----------------SPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLK 581 (801)
Q Consensus 519 ~~~~~~LV~E~~~~gsL~~~L~~~~~~-----------------~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIK 581 (801)
.....+|||||+++++|.+++...... .......+..|+.||+.||.|||+.+ |+|||||
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~g---IiHRDLK 282 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTG---IVHRDVK 282 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCC---EEeCcCC
Confidence 123578999999999999988654210 00112345679999999999999987 9999999
Q ss_pred CCCeeecC-CCCeeeecccceeeccCCCCcCCCccccCCCCCCCCCCCccccccC----------------------CCC
Q 003703 582 PQNILLDS-ELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTG----------------------VLT 638 (801)
Q Consensus 582 p~NILLd~-~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~----------------------~~s 638 (801)
|+||||+. ++.+||+|||+++.+..... .......||+.|+|||.+... .++
T Consensus 283 P~NILl~~~~~~~KL~DFGlA~~l~~~~~-----~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~ 357 (566)
T PLN03225 283 PQNIIFSEGSGSFKIIDLGAAADLRVGIN-----YIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLP 357 (566)
T ss_pred HHHEEEeCCCCcEEEEeCCCccccccccc-----cCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCC
Confidence 99999986 58999999999987643322 123456799999999965322 244
Q ss_pred cchhHHhHHHHHHHHHhCCCCCCChhH-HHHHhhcCc-----cccccCCCC-CCC------CHHHHHHHHHHHHHhhhhC
Q 003703 639 PKSDSYSFGLIILQLLTGRLPVGLAGE-VRRAVSCGK-----LSSILDPLA-GDW------PTFVARRLVDLGLQCCELY 705 (801)
Q Consensus 639 ~ksDVwSlGvvL~ELltG~~Pf~~~~~-~~~~~~~g~-----~~~~~d~~~-~~~------~~~~~~~l~~Li~~Cl~~d 705 (801)
.++|||||||+||||+++..|+..... ....+.... +...+.+.. .+. .........+|+.+||+.|
T Consensus 358 ~k~DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~d 437 (566)
T PLN03225 358 DRFDIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFK 437 (566)
T ss_pred CCcccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCC
Confidence 567999999999999998877642211 111111110 001111110 000 0001223558999999999
Q ss_pred CCCCCCchHHHHH
Q 003703 706 GRERPDITPSLVK 718 (801)
Q Consensus 706 P~~RPt~~e~l~~ 718 (801)
|.+|||+.+.+.+
T Consensus 438 P~kR~ta~e~L~H 450 (566)
T PLN03225 438 GRQRISAKAALAH 450 (566)
T ss_pred cccCCCHHHHhCC
Confidence 9999999865543
No 387
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.96 E-value=1.8e-30 Score=294.11 Aligned_cols=247 Identities=31% Similarity=0.376 Sum_probs=188.7
Q ss_pred CccccceeeecCceE-EEEEEECCeEEEEEEeccCCcccHHHHHHHHHHHhcC-CCCceeeEeccccC--CcceeeecCC
Q 003703 456 NFSESFKVGQGGFGC-VYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKL-QHPHLVTLLGACPE--AWSLVYEYLP 531 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~-Vy~g~~~g~~vAiK~l~~~~~~~~~~f~~E~~il~~l-~HpnIV~l~g~~~~--~~~LV~E~~~ 531 (801)
-|...+.+|.|+-|+ ||+|.+.|+.||||++.... .....+|+..|..- .|||||++|+.-.+ ..|+..|.|
T Consensus 510 ~~~~~eilG~Gs~Gt~Vf~G~ye~R~VAVKrll~e~---~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC- 585 (903)
T KOG1027|consen 510 FFSPKEILGYGSNGTVVFRGVYEGREVAVKRLLEEF---FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC- 585 (903)
T ss_pred eeccHHHcccCCCCcEEEEEeeCCceehHHHHhhHh---HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh-
Confidence 355566799999875 69999999999999985432 22356899999888 69999999987654 378999999
Q ss_pred CCchhhhhhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecC---C--CCeeeecccceeecc
Q 003703 532 NGSLQDRLFRKSN-VSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDS---E--LSSKICDFGICRLVT 605 (801)
Q Consensus 532 ~gsL~~~L~~~~~-~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~---~--~~vKL~DFGla~~~~ 605 (801)
..+|.+++..... .....-...+.+..|++.||++||+.+ ||||||||.||||+. + ..++|+|||+|+.+.
T Consensus 586 ~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~---iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~ 662 (903)
T KOG1027|consen 586 ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLK---IVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLA 662 (903)
T ss_pred hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcc---cccccCCCceEEEEccCCCcceeEEecccccccccC
Confidence 6899999976311 011111234667899999999999988 999999999999976 3 469999999999987
Q ss_pred CCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhC-CCCCCChhHHHHHhhcCccccccCCCCC
Q 003703 606 EDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTG-RLPVGLAGEVRRAVSCGKLSSILDPLAG 684 (801)
Q Consensus 606 ~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG-~~Pf~~~~~~~~~~~~g~~~~~~d~~~~ 684 (801)
.+.. ++.......||-+|+|||++....-+.++||||||||+|+.++| .+||+..-.-...+..|...-..-....
T Consensus 663 ~~~s---S~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl~~~~~L~~L~~~~ 739 (903)
T KOG1027|consen 663 GGKS---SFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANILTGNYTLVHLEPLP 739 (903)
T ss_pred CCcc---hhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhhhcCccceeeeccCc
Confidence 6653 33446678899999999999998888999999999999999995 8999855444344444432211101111
Q ss_pred CCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHH
Q 003703 685 DWPTFVARRLVDLGLQCCELYGRERPDITPSLVK 718 (801)
Q Consensus 685 ~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~ 718 (801)
++ ...+||.+|++++|..||++.+.+.|
T Consensus 740 d~------eA~dLI~~ml~~dP~~RPsa~~VL~H 767 (903)
T KOG1027|consen 740 DC------EAKDLISRMLNPDPQLRPSATDVLNH 767 (903)
T ss_pred hH------HHHHHHHHhcCCCcccCCCHHHHhCC
Confidence 11 77899999999999999999965543
No 388
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.96 E-value=7.4e-30 Score=247.26 Aligned_cols=200 Identities=26% Similarity=0.403 Sum_probs=160.5
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCC-cccHHHHHHHHHHHhcC-CCCceeeEecccc--CCcceeee
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHN-MQGQLEFQQEVRVLSKL-QHPHLVTLLGACP--EAWSLVYE 528 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~-~~~~~~f~~E~~il~~l-~HpnIV~l~g~~~--~~~~LV~E 528 (801)
++......||+|+||.|-+-++. |...|+|++...- .+.+.....|+++..+. ..|.+|.|||... .+..+.||
T Consensus 46 d~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME 125 (282)
T KOG0984|consen 46 DDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICME 125 (282)
T ss_pred hhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHH
Confidence 33444456999999999777764 9999999997653 34556788899887765 7999999999863 35678999
Q ss_pred cCCCCchhhhhhhc-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCC
Q 003703 529 YLPNGSLQDRLFRK-SNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 607 (801)
Q Consensus 529 ~~~~gsL~~~L~~~-~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~ 607 (801)
.| ..||..+-... .....++....-+|+..|..||.|||+.- .|||||+||+|||++.+|.+|+||||++-.+.+.
T Consensus 126 ~M-~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dS 202 (282)
T KOG0984|consen 126 LM-DTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDFGISGYLVDS 202 (282)
T ss_pred Hh-hhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEcccccceeehhh
Confidence 88 56776543321 23356788889999999999999999975 5999999999999999999999999999887654
Q ss_pred CCcCCCccccCCCCCCCCCCCccccc----cCCCCcchhHHhHHHHHHHHHhCCCCCCChh
Q 003703 608 TLYLPSFHRSTAPKGSFPYADPEYHR----TGVLTPKSDSYSFGLIILQLLTGRLPVGLAG 664 (801)
Q Consensus 608 ~~~~~~~~~~~~~~Gt~~Y~APE~~~----~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~ 664 (801)
.. .+...|--.|||||.+. ...|+.|+||||||+.++||.+++.||....
T Consensus 203 iA-------kt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~ 256 (282)
T KOG0984|consen 203 IA-------KTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWG 256 (282)
T ss_pred hH-------HHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccC
Confidence 32 23345778899999774 3479999999999999999999999997443
No 389
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.96 E-value=8.8e-30 Score=267.27 Aligned_cols=252 Identities=24% Similarity=0.283 Sum_probs=191.5
Q ss_pred hcCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcccHHHHHHHHHHHhcCC-C-C----ceeeEecccc--CCc
Q 003703 454 TCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQ-H-P----HLVTLLGACP--EAW 523 (801)
Q Consensus 454 t~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~-H-p----nIV~l~g~~~--~~~ 523 (801)
+++|....++|+|.||.|-.+.+. +..||||+++.-.. -.....-|+++|.++. + | -+|++.+||+ ...
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~k-YreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghi 166 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDK-YREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHI 166 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHH-HhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCce
Confidence 678888889999999999998775 78899999865322 2234556999999993 2 2 3788888885 457
Q ss_pred ceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecC--------------
Q 003703 524 SLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDS-------------- 589 (801)
Q Consensus 524 ~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~-------------- 589 (801)
|+|+|.+ |-|+.++|..+ +..+++...+..|+.|++.++.|||+.+ ++|.||||+|||+..
T Consensus 167 Civfell-G~S~~dFlk~N-~y~~fpi~~ir~m~~QL~~sv~fLh~~k---l~HTDLKPENILfvss~~~~~~~~k~~~~ 241 (415)
T KOG0671|consen 167 CIVFELL-GLSTFDFLKEN-NYIPFPIDHIRHMGYQLLESVAFLHDLK---LTHTDLKPENILFVSSEYFKTYNPKKKVC 241 (415)
T ss_pred EEEEecc-ChhHHHHhccC-CccccchHHHHHHHHHHHHHHHHHHhcc---eeecCCChheEEEeccceEEEeccCCccc
Confidence 8899988 77999999654 3467999999999999999999999998 999999999999931
Q ss_pred ------CCCeeeecccceeeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCCh
Q 003703 590 ------ELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLA 663 (801)
Q Consensus 590 ------~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~ 663 (801)
+..++|+|||.|..-.... ...+.|-.|.|||++.+-+++.+|||||+||||+||.||...|..-
T Consensus 242 ~~r~~ks~~I~vIDFGsAtf~~e~h---------s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtH 312 (415)
T KOG0671|consen 242 FIRPLKSTAIKVIDFGSATFDHEHH---------STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTH 312 (415)
T ss_pred eeccCCCcceEEEecCCcceeccCc---------ceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccC
Confidence 3458999999998754332 4567899999999999999999999999999999999999988633
Q ss_pred hHHHH-----------------------HhhcCcc-----------ccccCCCC-----CCCCHHHHHHHHHHHHHhhhh
Q 003703 664 GEVRR-----------------------AVSCGKL-----------SSILDPLA-----GDWPTFVARRLVDLGLQCCEL 704 (801)
Q Consensus 664 ~~~~~-----------------------~~~~g~~-----------~~~~d~~~-----~~~~~~~~~~l~~Li~~Cl~~ 704 (801)
++... ....|.+ ..+.++.. ......+...|++|+.+||..
T Consensus 313 en~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~f 392 (415)
T KOG0671|consen 313 ENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEF 392 (415)
T ss_pred CcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHcc
Confidence 32111 1111111 00111100 001123556799999999999
Q ss_pred CCCCCCCchHHHHHHH
Q 003703 705 YGRERPDITPSLVKEL 720 (801)
Q Consensus 705 dP~~RPt~~e~l~~~L 720 (801)
||.+|+|++|.+.+.+
T Consensus 393 DP~~RiTl~EAL~HpF 408 (415)
T KOG0671|consen 393 DPARRITLREALSHPF 408 (415)
T ss_pred CccccccHHHHhcCHH
Confidence 9999999997665543
No 390
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=5.5e-30 Score=254.39 Aligned_cols=252 Identities=24% Similarity=0.385 Sum_probs=186.8
Q ss_pred ccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEeccccC----------C
Q 003703 457 FSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACPE----------A 522 (801)
Q Consensus 457 f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~--~~~~~f~~E~~il~~l~HpnIV~l~g~~~~----------~ 522 (801)
|....+||+|.||.||+++.. |+.||+|+...... .-...-.+|+.+|..++|+|++.++..|.. .
T Consensus 19 yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t 98 (376)
T KOG0669|consen 19 YEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRAT 98 (376)
T ss_pred HHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccce
Confidence 444567999999999999775 78899887543222 222345789999999999999999998821 2
Q ss_pred cceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeeccccee
Q 003703 523 WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR 602 (801)
Q Consensus 523 ~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~ 602 (801)
.+|||.+|+ .+|..+|.... ..++..++.+++.++..||.|+|... |+|||+||.|+||+.+|.+||+|||+++
T Consensus 99 ~ylVf~~ce-hDLaGlLsn~~--vr~sls~Ikk~Mk~Lm~GL~~iHr~k---ilHRDmKaaNvLIt~dgilklADFGlar 172 (376)
T KOG0669|consen 99 FYLVFDFCE-HDLAGLLSNRK--VRFSLSEIKKVMKGLMNGLYYIHRNK---ILHRDMKAANVLITKDGILKLADFGLAR 172 (376)
T ss_pred eeeeHHHhh-hhHHHHhcCcc--ccccHHHHHHHHHHHHHHHHHHHHhh---HHhhcccHhhEEEcCCceEEeecccccc
Confidence 689999994 57877775443 45778899999999999999999988 9999999999999999999999999998
Q ss_pred eccCCCCcCCCccccCCCCCCCCCCCcccccc-CCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHH--h--hcCcccc
Q 003703 603 LVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRA--V--SCGKLSS 677 (801)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~-~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~--~--~~g~~~~ 677 (801)
.+....... ....++.+-|..|.+||.+.+ ..|+++.|||.-||||.||+||.+-|....+.... + -.|.+..
T Consensus 173 ~fs~~~n~~--kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tk 250 (376)
T KOG0669|consen 173 AFSTSKNVV--KPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITK 250 (376)
T ss_pred ceecccccC--CCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCc
Confidence 776443221 123567778999999997765 57999999999999999999999988643332111 1 0111110
Q ss_pred -------------cc--CCCCC-CCC--HHH------HHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 678 -------------IL--DPLAG-DWP--TFV------ARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 678 -------------~~--d~~~~-~~~--~~~------~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
.+ .|... .+. .+. ....++|+..++..||.+||+..+.+
T Consensus 251 evWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~al 313 (376)
T KOG0669|consen 251 EVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQAL 313 (376)
T ss_pred ccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhh
Confidence 00 01000 000 011 12678999999999999999998544
No 391
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.96 E-value=5.5e-29 Score=235.92 Aligned_cols=194 Identities=25% Similarity=0.352 Sum_probs=160.5
Q ss_pred CccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc--ccHHHHHHHHHHHhcCCCCceeeEecccc--CCcceeeec
Q 003703 456 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM--QGQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEY 529 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~--~~~~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~LV~E~ 529 (801)
+|...++||+|.||+||+|+.. ++.||+|+..-+.. .-.....+|+-+|..++|.|||++++... ....||+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 3455578999999999999875 78999999865543 22345789999999999999999999874 357899999
Q ss_pred CCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCC
Q 003703 530 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTL 609 (801)
Q Consensus 530 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~ 609 (801)
| ..+|..+..... +.++.+....++.|+++||.|+|+++ +.|||+||.|+|++.+|..||+|||+++.+.-...
T Consensus 83 c-dqdlkkyfdsln--g~~d~~~~rsfmlqllrgl~fchshn---vlhrdlkpqnllin~ngelkladfglarafgipvr 156 (292)
T KOG0662|consen 83 C-DQDLKKYFDSLN--GDLDPEIVRSFMLQLLRGLGFCHSHN---VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVR 156 (292)
T ss_pred h-hHHHHHHHHhcC--CcCCHHHHHHHHHHHHhhhhhhhhhh---hhhccCCcceEEeccCCcEEecccchhhhcCCceE
Confidence 9 457777665443 46788889999999999999999988 99999999999999999999999999998764331
Q ss_pred cCCCccccCCCCCCCCCCCccccccC-CCCcchhHHhHHHHHHHHHh-CCCCCC
Q 003703 610 YLPSFHRSTAPKGSFPYADPEYHRTG-VLTPKSDSYSFGLIILQLLT-GRLPVG 661 (801)
Q Consensus 610 ~~~~~~~~~~~~Gt~~Y~APE~~~~~-~~s~ksDVwSlGvvL~ELlt-G~~Pf~ 661 (801)
.....+-|..|.+|.++.+. -|++..|+||-|||+.||.. |++.|.
T Consensus 157 ------cysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfp 204 (292)
T KOG0662|consen 157 ------CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFP 204 (292)
T ss_pred ------eeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCC
Confidence 23455789999999988665 58999999999999999998 455454
No 392
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.95 E-value=1.1e-28 Score=258.24 Aligned_cols=264 Identities=24% Similarity=0.347 Sum_probs=213.1
Q ss_pred CHHHHHHHhcCccccceeeecCceEEEEEEEC-------CeEEEEEEeccCCcccH-HHHHHHHHHHhcCCCCceeeEec
Q 003703 446 SLADLQTATCNFSESFKVGQGGFGCVYKGEML-------GRTVAIKMLYSHNMQGQ-LEFQQEVRVLSKLQHPHLVTLLG 517 (801)
Q Consensus 446 ~~~el~~at~~f~~~~~LG~G~fG~Vy~g~~~-------g~~vAiK~l~~~~~~~~-~~f~~E~~il~~l~HpnIV~l~g 517 (801)
...+|..-.++|.....+-+|.||.||.|.+. .+.|-+|.++....+-+ ..|..|--.|..+.|||+..+.|
T Consensus 275 r~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~ 354 (563)
T KOG1024|consen 275 RLQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLG 354 (563)
T ss_pred hHHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeE
Confidence 35667777788999999999999999999775 23466777765544433 34788988999999999999999
Q ss_pred cccC---CcceeeecCCCCchhhhhhh-----cCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecC
Q 003703 518 ACPE---AWSLVYEYLPNGSLQDRLFR-----KSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDS 589 (801)
Q Consensus 518 ~~~~---~~~LV~E~~~~gsL~~~L~~-----~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~ 589 (801)
.+.+ ..+++|.++.-|+|..+|.. ......++-.+...++.|++.|+.|||+++ |||.||...|.+||+
T Consensus 355 V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~---ViHkDiAaRNCvIdd 431 (563)
T KOG1024|consen 355 VSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHG---VIHKDIAARNCVIDD 431 (563)
T ss_pred EEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcC---cccchhhhhcceehh
Confidence 9843 46789999999999999983 333455667778889999999999999988 999999999999999
Q ss_pred CCCeeeecccceeeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChh--HH
Q 003703 590 ELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAG--EV 666 (801)
Q Consensus 590 ~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~--~~ 666 (801)
...+||+|-.+++.+-+.+... -..+-.....||+||.+.+..|+..+|||||||+||||+| |+.|+...+ ++
T Consensus 432 ~LqVkltDsaLSRDLFP~DYhc----LGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm 507 (563)
T KOG1024|consen 432 QLQVKLTDSALSRDLFPGDYHC----LGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEM 507 (563)
T ss_pred heeEEeccchhccccCcccccc----cCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHH
Confidence 9999999999999776544321 1223334567999999999999999999999999999999 999997554 45
Q ss_pred HHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHHhhh
Q 003703 667 RRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHV 725 (801)
Q Consensus 667 ~~~~~~g~~~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~l~~ 725 (801)
...+.+|... ..|.+++.+|..++..||...|++||++. .+++-|..+..
T Consensus 508 ~~ylkdGyRl--------aQP~NCPDeLf~vMacCWallpeeRPsf~-Qlv~cLseF~~ 557 (563)
T KOG1024|consen 508 EHYLKDGYRL--------AQPFNCPDELFTVMACCWALLPEERPSFS-QLVICLSEFHT 557 (563)
T ss_pred HHHHhcccee--------cCCCCCcHHHHHHHHHHHhcCcccCCCHH-HHHHHHHHHHH
Confidence 5666666432 23556778999999999999999999998 78777776543
No 393
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.95 E-value=1.2e-26 Score=233.44 Aligned_cols=203 Identities=37% Similarity=0.551 Sum_probs=177.2
Q ss_pred eeecCceEEEEEEEC--CeEEEEEEeccCCcc-cHHHHHHHHHHHhcCCCCceeeEeccccC--CcceeeecCCCCchhh
Q 003703 463 VGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ-GQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYEYLPNGSLQD 537 (801)
Q Consensus 463 LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~-~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E~~~~gsL~~ 537 (801)
||+|++|.||++... |..+++|++...... ....+.+|+.++..++|++|+++++++.. ..+++|||+++++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 689999999999997 899999998765443 34568899999999999999999999865 6789999999999999
Q ss_pred hhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecC-CCCeeeecccceeeccCCCCcCCCccc
Q 003703 538 RLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDS-ELSSKICDFGICRLVTEDTLYLPSFHR 616 (801)
Q Consensus 538 ~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~-~~~vKL~DFGla~~~~~~~~~~~~~~~ 616 (801)
++.... ..+++..+..++.+++.+|.|||+.+ ++|+||+|.||+++. ++.++|+|||.+........ .
T Consensus 81 ~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~~---~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~------~ 149 (215)
T cd00180 81 LLKENE--GKLSEDEILRILLQILEGLEYLHSNG---IIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS------L 149 (215)
T ss_pred HHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc------h
Confidence 987643 35788999999999999999999987 999999999999999 89999999999987654321 1
Q ss_pred cCCCCCCCCCCCccccccC-CCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhhcCccccccCCCCCCCCHHHHHHHH
Q 003703 617 STAPKGSFPYADPEYHRTG-VLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFVARRLV 695 (801)
Q Consensus 617 ~~~~~Gt~~Y~APE~~~~~-~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~g~~~~~~d~~~~~~~~~~~~~l~ 695 (801)
.....++..|++||.+... .++.++|+|+||+++++| ..+.
T Consensus 150 ~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l--------------------------------------~~~~ 191 (215)
T cd00180 150 LKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL--------------------------------------PELK 191 (215)
T ss_pred hhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH--------------------------------------HHHH
Confidence 2345688899999998877 888999999999999999 5788
Q ss_pred HHHHHhhhhCCCCCCCchH
Q 003703 696 DLGLQCCELYGRERPDITP 714 (801)
Q Consensus 696 ~Li~~Cl~~dP~~RPt~~e 714 (801)
+++..|++.+|.+||++.+
T Consensus 192 ~~l~~~l~~~p~~R~~~~~ 210 (215)
T cd00180 192 DLIRKMLQKDPEKRPSAKE 210 (215)
T ss_pred HHHHHHhhCCcccCcCHHH
Confidence 9999999999999999974
No 394
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.94 E-value=4.2e-28 Score=268.39 Aligned_cols=249 Identities=25% Similarity=0.318 Sum_probs=203.7
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccc--cCCcceeeecC
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGAC--PEAWSLVYEYL 530 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~--~~~~~LV~E~~ 530 (801)
.+|.....+|.|.||.||++++. +...|+|+++-....+..-.++|+-++...+|||||.++|.+ .+.+.++||||
T Consensus 15 ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEyc 94 (829)
T KOG0576|consen 15 DDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYC 94 (829)
T ss_pred cchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEec
Confidence 46777888999999999999885 899999999887777777788999999999999999999998 45788999999
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCc
Q 003703 531 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLY 610 (801)
Q Consensus 531 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~ 610 (801)
.+|+|.+.-+-- .++...++...+.....||.|||+.+ -+|||||-.|||++..|.+|++|||.+-.+...
T Consensus 95 gggslQdiy~~T---gplselqiayvcRetl~gl~ylhs~g---k~hRdiKGanilltd~gDvklaDfgvsaqitat--- 165 (829)
T KOG0576|consen 95 GGGSLQDIYHVT---GPLSELQIAYVCRETLQGLKYLHSQG---KIHRDIKGANILLTDEGDVKLADFGVSAQITAT--- 165 (829)
T ss_pred CCCcccceeeec---ccchhHHHHHHHhhhhccchhhhcCC---cccccccccceeecccCceeecccCchhhhhhh---
Confidence 999999976543 47888888899999999999999998 799999999999999999999999998766432
Q ss_pred CCCccccCCCCCCCCCCCcccc---ccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhhcCccccccCCCCCCCC
Q 003703 611 LPSFHRSTAPKGSFPYADPEYH---RTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWP 687 (801)
Q Consensus 611 ~~~~~~~~~~~Gt~~Y~APE~~---~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~g~~~~~~d~~~~~~~ 687 (801)
..+.....||+.|||||+. ..+.|...||||++|+...||---++|.......+...... ...++|....-+
T Consensus 166 ---i~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmT--kS~~qpp~lkDk 240 (829)
T KOG0576|consen 166 ---IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMT--KSGFQPPTLKDK 240 (829)
T ss_pred ---hhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhh--ccCCCCCcccCC
Confidence 2356778999999999975 56789999999999999999988888865444443332111 112333222333
Q ss_pred HHHHHHHHHHHHHhhhhCCCCCCCchHHHH
Q 003703 688 TFVARRLVDLGLQCCELYGRERPDITPSLV 717 (801)
Q Consensus 688 ~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~ 717 (801)
......|.+++..|+..+|++||+....|.
T Consensus 241 ~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 241 TKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred ccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 445678999999999999999999875543
No 395
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.94 E-value=3.4e-27 Score=231.75 Aligned_cols=246 Identities=21% Similarity=0.338 Sum_probs=188.3
Q ss_pred hcCccccceeeecCceEEEEEEE--CCeEEEEEEeccCCcccHHHHHHHHHHHhcCC-CCceeeEeccccC----Cccee
Q 003703 454 TCNFSESFKVGQGGFGCVYKGEM--LGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQ-HPHLVTLLGACPE----AWSLV 526 (801)
Q Consensus 454 t~~f~~~~~LG~G~fG~Vy~g~~--~g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~-HpnIV~l~g~~~~----~~~LV 526 (801)
.++|...+++|+|.|+.||.|.. +...++||++++-. .+.+.+|+.||..|+ ||||++|++...+ ...||
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk---kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLi 113 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK---KKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLI 113 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH---HHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhH
Confidence 35777888999999999999985 47899999997643 446789999999997 9999999998854 36799
Q ss_pred eecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCC-CCeeeecccceeecc
Q 003703 527 YEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSE-LSSKICDFGICRLVT 605 (801)
Q Consensus 527 ~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~-~~vKL~DFGla~~~~ 605 (801)
+||+++.+...+. +.|+...+...+.+++.||.|+|+.| |+|||+||.|+++|.. -.++|+|+|+|....
T Consensus 114 FE~v~n~Dfk~ly------~tl~d~dIryY~~elLkALdyCHS~G---ImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYH 184 (338)
T KOG0668|consen 114 FEYVNNTDFKQLY------PTLTDYDIRYYIYELLKALDYCHSMG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH 184 (338)
T ss_pred hhhhccccHHHHh------hhhchhhHHHHHHHHHHHHhHHHhcC---cccccCCcceeeechhhceeeeeecchHhhcC
Confidence 9999998877654 45666788889999999999999998 9999999999999965 569999999999876
Q ss_pred CCCCcCCCccccCCCCCCCCCCCcccccc-CCCCcchhHHhHHHHHHHHHhCCCCCCCh----------------hHHHH
Q 003703 606 EDTLYLPSFHRSTAPKGSFPYADPEYHRT-GVLTPKSDSYSFGLIILQLLTGRLPVGLA----------------GEVRR 668 (801)
Q Consensus 606 ~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~-~~~s~ksDVwSlGvvL~ELltG~~Pf~~~----------------~~~~~ 668 (801)
++.. ....+.+-.|--||.+.. ..|+-+-|+|||||+|..|+..+.||-.. ++...
T Consensus 185 p~~e-------YnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~ 257 (338)
T KOG0668|consen 185 PGKE-------YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYA 257 (338)
T ss_pred CCce-------eeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHH
Confidence 5542 234456667889997754 56899999999999999999999998421 11111
Q ss_pred HhhcC------ccccccCC-CCCCCCH--------HHHHHHHHHHHHhhhhCCCCCCCchHHHHH
Q 003703 669 AVSCG------KLSSILDP-LAGDWPT--------FVARRLVDLGLQCCELYGRERPDITPSLVK 718 (801)
Q Consensus 669 ~~~~g------~~~~~~d~-~~~~~~~--------~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~ 718 (801)
.+..- .+..++.. ....|.. -.+++..+|+.+.|..|-.+|||+.+.+.+
T Consensus 258 Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~H 322 (338)
T KOG0668|consen 258 YLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAH 322 (338)
T ss_pred HHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcC
Confidence 11111 11111111 1112222 134678999999999999999999865543
No 396
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.94 E-value=5.6e-26 Score=233.03 Aligned_cols=196 Identities=36% Similarity=0.512 Sum_probs=168.5
Q ss_pred ccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcc-cHHHHHHHHHHHhcCCCCceeeEecccc--CCcceeeecCC
Q 003703 457 FSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ-GQLEFQQEVRVLSKLQHPHLVTLLGACP--EAWSLVYEYLP 531 (801)
Q Consensus 457 f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~-~~~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~LV~E~~~ 531 (801)
|.....||.|+||.||+|... +..+|+|.+...... ....+.+|+..+.+++|+|++++++++. ...++++||++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 455678999999999999886 689999999876554 5667889999999999999999999885 45789999999
Q ss_pred CCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcC
Q 003703 532 NGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYL 611 (801)
Q Consensus 532 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~ 611 (801)
+++|.+++..... .+++.....++.+++.+|.|||..+ ++|+||+|.||+++.++.++|+|||++.........
T Consensus 81 ~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~- 154 (225)
T smart00221 81 GGDLFDYLRKKGG--KLSEEEARFYLRQILEALEYLHSLG---IVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAA- 154 (225)
T ss_pred CCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccc-
Confidence 9999998876432 2788999999999999999999987 999999999999999999999999999887543200
Q ss_pred CCccccCCCCCCCCCCCcccc-ccCCCCcchhHHhHHHHHHHHHhCCCCCCC
Q 003703 612 PSFHRSTAPKGSFPYADPEYH-RTGVLTPKSDSYSFGLIILQLLTGRLPVGL 662 (801)
Q Consensus 612 ~~~~~~~~~~Gt~~Y~APE~~-~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~ 662 (801)
......++..|++||.+ ....++.++|||+||+++++|++|+.||..
T Consensus 155 ----~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 155 ----LLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred ----cccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 12345678899999998 677788899999999999999999999965
No 397
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.93 E-value=7.7e-28 Score=241.27 Aligned_cols=194 Identities=26% Similarity=0.406 Sum_probs=158.8
Q ss_pred CccccceeeecCceEEEEEEEC--CeEEEEEEeccC--CcccHHHHHHHHHHHhcCCCCceeeEecccc-------CCcc
Q 003703 456 NFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSH--NMQGQLEFQQEVRVLSKLQHPHLVTLLGACP-------EAWS 524 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~--~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~-------~~~~ 524 (801)
+...++.||-|+||.||..++. |+.||+|++..- .....+.+.+|+.+|.-++|.|++..++... ++.|
T Consensus 54 Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiY 133 (449)
T KOG0664|consen 54 DIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELY 133 (449)
T ss_pred cCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHH
Confidence 4456778999999999999874 899999987542 2233456889999999999999999877652 2467
Q ss_pred eeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeec
Q 003703 525 LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLV 604 (801)
Q Consensus 525 LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~ 604 (801)
++.|.| ..+|..++..- .+++-..+.-+.+||++||.|||+.+ |.||||||.|+|++.|..+||||||+++..
T Consensus 134 V~TELm-QSDLHKIIVSP---Q~Ls~DHvKVFlYQILRGLKYLHsA~---ILHRDIKPGNLLVNSNCvLKICDFGLARve 206 (449)
T KOG0664|consen 134 VLTELM-QSDLHKIIVSP---QALTPDHVKVFVYQILRGLKYLHTAN---ILHRDIKPGNLLVNSNCILKICDFGLARTW 206 (449)
T ss_pred HHHHHH-HhhhhheeccC---CCCCcchhhhhHHHHHhhhHHHhhcc---hhhccCCCccEEeccCceEEeccccccccc
Confidence 888888 45777666433 45777788889999999999999998 999999999999999999999999999987
Q ss_pred cCCCCcCCCccccCCCCCCCCCCCccccccC-CCCcchhHHhHHHHHHHHHhCCCCCC
Q 003703 605 TEDTLYLPSFHRSTAPKGSFPYADPEYHRTG-VLTPKSDSYSFGLIILQLLTGRLPVG 661 (801)
Q Consensus 605 ~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~-~~s~ksDVwSlGvvL~ELltG~~Pf~ 661 (801)
..+... ..+..+-|..|.|||++.+. .|+...||||.|||+.||+..+..|.
T Consensus 207 e~d~~~-----hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQ 259 (449)
T KOG0664|consen 207 DQRDRL-----NMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQ 259 (449)
T ss_pred chhhhh-----hhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhh
Confidence 654422 23445678899999988764 69999999999999999999888775
No 398
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.93 E-value=5.3e-26 Score=233.84 Aligned_cols=249 Identities=23% Similarity=0.271 Sum_probs=186.0
Q ss_pred cCccccceeeecCceEEEEEEE--CCeEEEEEEeccC--CcccHHHHHHHHHHHhcCCCCceeeEeccccC--------C
Q 003703 455 CNFSESFKVGQGGFGCVYKGEM--LGRTVAIKMLYSH--NMQGQLEFQQEVRVLSKLQHPHLVTLLGACPE--------A 522 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~--~g~~vAiK~l~~~--~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--------~ 522 (801)
.+|.....+|.|.- .|-.+-+ .+.+||+|.+... .........+|..++..+.|+||++++.+|.- +
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e 95 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQE 95 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHh
Confidence 46666778888887 5555433 4899999987443 22333456789999999999999999998831 3
Q ss_pred cceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeeccccee
Q 003703 523 WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICR 602 (801)
Q Consensus 523 ~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~ 602 (801)
.|+|||+| .++|...+.. .++-.....|++|++.|+.|||+.+ |+||||||+||++..++.+||.|||+|+
T Consensus 96 ~y~v~e~m-~~nl~~vi~~-----elDH~tis~i~yq~~~~ik~lhs~~---IihRdLkPsnivv~~~~~lKi~dfg~ar 166 (369)
T KOG0665|consen 96 VYLVMELM-DANLCQVILM-----ELDHETISYILYQMLCGIKHLHSAG---IIHRDLKPSNIVVNSDCTLKILDFGLAR 166 (369)
T ss_pred HHHHHHhh-hhHHHHHHHH-----hcchHHHHHHHHHHHHHHHHHHhcc---eeecccCcccceecchhheeeccchhhc
Confidence 68999999 5788877763 2444778899999999999999998 9999999999999999999999999998
Q ss_pred eccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhhc----------
Q 003703 603 LVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSC---------- 672 (801)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~---------- 672 (801)
....+ -..+..+.|-.|.|||++.+.+|...+||||+||++.||++|+.-|.+.+.+.++...
T Consensus 167 ~e~~~-------~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~ 239 (369)
T KOG0665|consen 167 TEDTD-------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPS 239 (369)
T ss_pred ccCcc-------cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHH
Confidence 75433 1346678899999999999988999999999999999999999887533322111000
Q ss_pred ---------------------Ccccccc-CC---CCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHH
Q 003703 673 ---------------------GKLSSIL-DP---LAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKEL 720 (801)
Q Consensus 673 ---------------------g~~~~~~-d~---~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L 720 (801)
-.+.+.+ |. ...+.+...+..+.+|+.+||-.||++|-+..+.|.+..
T Consensus 240 F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY 312 (369)
T KOG0665|consen 240 FMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPY 312 (369)
T ss_pred HHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCe
Confidence 0111111 10 001111223446789999999999999999986665543
No 399
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.93 E-value=1.8e-26 Score=251.69 Aligned_cols=193 Identities=22% Similarity=0.335 Sum_probs=163.8
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcc------cH--HHHHHHHHHHhcCC---CCceeeEeccccC
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ------GQ--LEFQQEVRVLSKLQ---HPHLVTLLGACPE 521 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~------~~--~~f~~E~~il~~l~---HpnIV~l~g~~~~ 521 (801)
.+|.....+|.|+||.|+.+.++ ...|+||.+.+...- +. ..+--|+.||+.++ |+||++++.+|.+
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd 640 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED 640 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence 45788889999999999999886 678999998765421 11 12457999999997 9999999999954
Q ss_pred --CcceeeecC-CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecc
Q 003703 522 --AWSLVYEYL-PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDF 598 (801)
Q Consensus 522 --~~~LV~E~~-~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DF 598 (801)
.+||+||-- +|-+|.+++..+ +.++..++.-|+.||+.|+.+||+.+ |||||||-+||.+|.+|-+||+||
T Consensus 641 dd~yyl~te~hg~gIDLFd~IE~k---p~m~E~eAk~IFkQV~agi~hlh~~~---ivhrdikdenvivd~~g~~klidf 714 (772)
T KOG1152|consen 641 DDYYYLETEVHGEGIDLFDFIEFK---PRMDEPEAKLIFKQVVAGIKHLHDQG---IVHRDIKDENVIVDSNGFVKLIDF 714 (772)
T ss_pred CCeeEEEecCCCCCcchhhhhhcc---CccchHHHHHHHHHHHhccccccccC---ceecccccccEEEecCCeEEEeec
Confidence 577888864 455888988765 35888999999999999999999998 999999999999999999999999
Q ss_pred cceeeccCCCCcCCCccccCCCCCCCCCCCccccccCCC-CcchhHHhHHHHHHHHHhCCCCCC
Q 003703 599 GICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVL-TPKSDSYSFGLIILQLLTGRLPVG 661 (801)
Q Consensus 599 Gla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~-s~ksDVwSlGvvL~ELltG~~Pf~ 661 (801)
|.+.....+. ....+||.+|.|||++.+.+| +..-|||++|++||-++....||.
T Consensus 715 gsaa~~ksgp--------fd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 715 GSAAYTKSGP--------FDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred cchhhhcCCC--------cceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 9998776543 346789999999999998887 567999999999999999988874
No 400
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.93 E-value=1.5e-26 Score=249.33 Aligned_cols=198 Identities=25% Similarity=0.335 Sum_probs=164.7
Q ss_pred HHhcCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcccHHHHHHHHHHHhcCC------CCceeeEecccc--C
Q 003703 452 TATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQ------HPHLVTLLGACP--E 521 (801)
Q Consensus 452 ~at~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~------HpnIV~l~g~~~--~ 521 (801)
.....|......|+|-|++|..|.+. |..||||++........ .=..|++||.+|+ --|+++|+..|. .
T Consensus 429 ~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~K-tGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hkn 507 (752)
T KOG0670|consen 429 LLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHK-TGLKELEILKKLNDADPEDKFHCLRLFRHFKHKN 507 (752)
T ss_pred hhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhh-hhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcc
Confidence 45567877788899999999999885 88999999987644322 2346999999994 348899988774 4
Q ss_pred CcceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCC-CCeeeecccc
Q 003703 522 AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSE-LSSKICDFGI 600 (801)
Q Consensus 522 ~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~-~~vKL~DFGl 600 (801)
.+|||||-+ ..+|.++|.+.+..-.|....+..++.|+..||..|-..+ |+|.||||+|||+++. ..+||||||.
T Consensus 508 HLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~---vlHaDIKPDNiLVNE~k~iLKLCDfGS 583 (752)
T KOG0670|consen 508 HLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCG---VLHADIKPDNILVNESKNILKLCDFGS 583 (752)
T ss_pred eeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcC---eeecccCccceEeccCcceeeeccCcc
Confidence 689999988 6799999988876666888889999999999999999988 9999999999999865 5689999999
Q ss_pred eeeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCC
Q 003703 601 CRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGL 662 (801)
Q Consensus 601 a~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~ 662 (801)
|.....+.. +...-+--|.|||++.+-.|+...|+||.||+||||.||+.-|..
T Consensus 584 A~~~~enei--------tPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG 637 (752)
T KOG0670|consen 584 ASFASENEI--------TPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPG 637 (752)
T ss_pred ccccccccc--------cHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCC
Confidence 988765542 122233459999999999999999999999999999999988853
No 401
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.92 E-value=9.3e-25 Score=234.92 Aligned_cols=128 Identities=27% Similarity=0.363 Sum_probs=107.0
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcccHHHHHHHHHHHhcCC-----C---CceeeEeccccC---
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQ-----H---PHLVTLLGACPE--- 521 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~-----H---pnIV~l~g~~~~--- 521 (801)
.+|...++||.|-|++||++.+. .+.||+|+.+...-. .+....|+.+|.+++ | ..||+|++.|..
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhY-tEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGp 156 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHY-TEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGP 156 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHH-HHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCC
Confidence 57888899999999999999886 688999998653221 223568999999983 3 369999999832
Q ss_pred ---CcceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeee
Q 003703 522 ---AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILL 587 (801)
Q Consensus 522 ---~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILL 587 (801)
..|||+|++ |.+|..+|.... ...++...+.+|+.||+.||.|||..+ +|||-||||+||||
T Consensus 157 NG~HVCMVfEvL-GdnLLklI~~s~-YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl 221 (590)
T KOG1290|consen 157 NGQHVCMVFEVL-GDNLLKLIKYSN-YRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLL 221 (590)
T ss_pred CCcEEEEEehhh-hhHHHHHHHHhC-CCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeee
Confidence 378999999 888988886654 356888999999999999999999998 69999999999999
No 402
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.92 E-value=2.3e-25 Score=272.14 Aligned_cols=200 Identities=18% Similarity=0.146 Sum_probs=140.8
Q ss_pred cCCC-CceeeEecccc---------CCcceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCce
Q 003703 506 KLQH-PHLVTLLGACP---------EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKI 575 (801)
Q Consensus 506 ~l~H-pnIV~l~g~~~---------~~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~i 575 (801)
.++| +||++++++|. +..++++||+ +++|.++|.... ..+++..++.|+.||+.||.|||+.+ |
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~g---I 101 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPD--RSVDAFECFHVFRQIVEIVNAAHSQG---I 101 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhccc--ccccHHHHHHHHHHHHHHHHHHHhCC---e
Confidence 4556 68888888771 1245678887 679999996432 46899999999999999999999988 9
Q ss_pred eeCCCCCCCeeecC-------------------CCCeeeecccceeeccCCCC----------cCCCccccCCCCCCCCC
Q 003703 576 VHGDLKPQNILLDS-------------------ELSSKICDFGICRLVTEDTL----------YLPSFHRSTAPKGSFPY 626 (801)
Q Consensus 576 iHrDIKp~NILLd~-------------------~~~vKL~DFGla~~~~~~~~----------~~~~~~~~~~~~Gt~~Y 626 (801)
+||||||+||||+. ++.+||+|||+++....... ..+.........||+.|
T Consensus 102 vHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y 181 (793)
T PLN00181 102 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWY 181 (793)
T ss_pred eeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcce
Confidence 99999999999965 44556666666654211000 00000011234689999
Q ss_pred CCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhhhCC
Q 003703 627 ADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYG 706 (801)
Q Consensus 627 ~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~g~~~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP 706 (801)
||||++.+..|+.++|||||||+||||++|.+|+.........+.... +.+. + .........++.+||+.+|
T Consensus 182 ~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~~~~~~~~~----~~~~---~-~~~~~~~~~~~~~~L~~~P 253 (793)
T PLN00181 182 TSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSRTMSSLRHRV----LPPQ---I-LLNWPKEASFCLWLLHPEP 253 (793)
T ss_pred EChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHHHHHHHHHhh----cChh---h-hhcCHHHHHHHHHhCCCCh
Confidence 999999999999999999999999999999999764332222221111 1111 0 1112345688899999999
Q ss_pred CCCCCchHHHHHH
Q 003703 707 RERPDITPSLVKE 719 (801)
Q Consensus 707 ~~RPt~~e~l~~~ 719 (801)
.+||++.+.+.+.
T Consensus 254 ~~Rps~~eil~h~ 266 (793)
T PLN00181 254 SCRPSMSELLQSE 266 (793)
T ss_pred hhCcChHHHhhch
Confidence 9999999765443
No 403
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.92 E-value=2.3e-25 Score=223.98 Aligned_cols=244 Identities=24% Similarity=0.322 Sum_probs=179.5
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcccHHHHHHHHHHHhcC-CCCceeeEecc-cc--CCcceeee
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKL-QHPHLVTLLGA-CP--EAWSLVYE 528 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~~~~f~~E~~il~~l-~HpnIV~l~g~-~~--~~~~LV~E 528 (801)
+.|.+.+.||+|.||.+-++.++ .+.+++|.+... ...+.+|.+|...---| .|.||+.-|.. |. +.+.+++|
T Consensus 24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p-~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE 102 (378)
T KOG1345|consen 24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRP-QTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQE 102 (378)
T ss_pred hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcc-hhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeec
Confidence 35777889999999999999997 578999987543 34567899998765555 59999988854 43 45678999
Q ss_pred cCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeee-cC-CCCeeeecccceeeccC
Q 003703 529 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILL-DS-ELSSKICDFGICRLVTE 606 (801)
Q Consensus 529 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILL-d~-~~~vKL~DFGla~~~~~ 606 (801)
|+|.|+|..-+... .+-.....+++.|+++||.|+|+.+ +||||||.+|||+ +. ...+||||||+.+....
T Consensus 103 ~aP~gdL~snv~~~----GigE~~~K~v~~ql~SAi~fMHskn---lVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~ 175 (378)
T KOG1345|consen 103 FAPRGDLRSNVEAA----GIGEANTKKVFAQLLSAIEFMHSKN---LVHRDLKAENILIFDADFYRVKLCDFGLTRKVGT 175 (378)
T ss_pred cCccchhhhhcCcc----cccHHHHHHHHHHHHHHHHHhhccc---hhhcccccceEEEecCCccEEEeeecccccccCc
Confidence 99999998876443 3556778899999999999999988 9999999999998 33 34799999999876532
Q ss_pred CCCcCCCccccCCCCCCCCCCCccccccC-----CCCcchhHHhHHHHHHHHHhCCCCCCC------hhHHHHHhhcCcc
Q 003703 607 DTLYLPSFHRSTAPKGSFPYADPEYHRTG-----VLTPKSDSYSFGLIILQLLTGRLPVGL------AGEVRRAVSCGKL 675 (801)
Q Consensus 607 ~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~-----~~s~ksDVwSlGvvL~ELltG~~Pf~~------~~~~~~~~~~g~~ 675 (801)
.. ....-+..|.+||..... ...+.+|||.||+++|.++||++||.- .-+-+..+..++.
T Consensus 176 tV---------~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~ 246 (378)
T KOG1345|consen 176 TV---------KYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKN 246 (378)
T ss_pred ee---------hhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccC
Confidence 21 222345679999965432 346889999999999999999999961 1123444555544
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHH
Q 003703 676 SSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELE 721 (801)
Q Consensus 676 ~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~ 721 (801)
..+.+ --...++.+..+-.+-+..+|++|--.. .+.+...
T Consensus 247 ~~~P~-----~F~~fs~~a~r~Fkk~lt~~~~drcki~-~~kk~rk 286 (378)
T KOG1345|consen 247 PALPK-----KFNPFSEKALRLFKKSLTPRFKDRCKIW-TAKKMRK 286 (378)
T ss_pred ccCch-----hhcccCHHHHHHHHHhcCCcccccchhH-HHHHHHH
Confidence 33221 1122556778888888999999985544 3444433
No 404
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.91 E-value=5.8e-24 Score=211.29 Aligned_cols=161 Identities=23% Similarity=0.214 Sum_probs=123.2
Q ss_pred CchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCC
Q 003703 533 GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLP 612 (801)
Q Consensus 533 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~ 612 (801)
|+|.+++.... ..++|..++.|+.||+.||.|||+.+ ||+|||++.++.+|+ ||+++.....
T Consensus 1 GsL~~~l~~~~--~~l~~~~~~~i~~qi~~~L~~lH~~~---------kp~Nil~~~~~~~~~--fG~~~~~~~~----- 62 (176)
T smart00750 1 VSLADILEVRG--RPLNEEEIWAVCLQCLRALRELHRQA---------KSGNILLTWDGLLKL--DGSVAFKTPE----- 62 (176)
T ss_pred CcHHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhcC---------CcccEeEcCccceee--ccceEeeccc-----
Confidence 78999887543 46999999999999999999999965 999999999999999 9999876432
Q ss_pred CccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHH---HHhhcCccccccCCCCCCCCHH
Q 003703 613 SFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVR---RAVSCGKLSSILDPLAGDWPTF 689 (801)
Q Consensus 613 ~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~---~~~~~g~~~~~~d~~~~~~~~~ 689 (801)
...||+.|+|||++.+..++.++|||||||++|||+||+.||....... ..+..+... .++.....+..
T Consensus 63 ------~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 134 (176)
T smart00750 63 ------QSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPA--DDPRDRSNLES 134 (176)
T ss_pred ------cCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhcc--CCccccccHHH
Confidence 1258999999999999999999999999999999999999996433211 111111111 11111112233
Q ss_pred HHH--HHHHHHHHhhhhCCCCCCCchHHHHHH
Q 003703 690 VAR--RLVDLGLQCCELYGRERPDITPSLVKE 719 (801)
Q Consensus 690 ~~~--~l~~Li~~Cl~~dP~~RPt~~e~l~~~ 719 (801)
... .+.+++.+||..+|.+||++.+.+.+.
T Consensus 135 ~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~ 166 (176)
T smart00750 135 VSAARSFADFMRVCASRLPQRREAANHYLAHC 166 (176)
T ss_pred HHhhhhHHHHHHHHHhcccccccCHHHHHHHH
Confidence 333 699999999999999999999544433
No 405
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.91 E-value=8.9e-25 Score=232.76 Aligned_cols=258 Identities=24% Similarity=0.359 Sum_probs=189.6
Q ss_pred HHHHhcCccccceeeecCceEEEEEEEC-----CeEEEEEEeccCCcccHHHHHHHHHHHhcC-CCCceeeEeccc--cC
Q 003703 450 LQTATCNFSESFKVGQGGFGCVYKGEML-----GRTVAIKMLYSHNMQGQLEFQQEVRVLSKL-QHPHLVTLLGAC--PE 521 (801)
Q Consensus 450 l~~at~~f~~~~~LG~G~fG~Vy~g~~~-----g~~vAiK~l~~~~~~~~~~f~~E~~il~~l-~HpnIV~l~g~~--~~ 521 (801)
+....+.|...++||+|.|++||++.+. ...||+|.+.... ....+.+|+++|..+ -+.||+++.+++ .+
T Consensus 31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts--~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd 108 (418)
T KOG1167|consen 31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS--SPSRILNELEMLYRLGGSDNIIKLNGCFRNND 108 (418)
T ss_pred hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc--CchHHHHHHHHHHHhccchhhhcchhhhccCC
Confidence 3345567888899999999999999653 5789999986543 334578999999999 599999999998 45
Q ss_pred CcceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCC-CCeeeecccc
Q 003703 522 AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSE-LSSKICDFGI 600 (801)
Q Consensus 522 ~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~-~~vKL~DFGl 600 (801)
..++|+||++.....+++. .++...+..++..+..||.++|.+| ||||||||+|+|.+.. +.-.|.|||+
T Consensus 109 ~v~ivlp~~~H~~f~~l~~------~l~~~~i~~Yl~~ll~Al~~~h~~G---IvHRDiKpsNFL~n~~t~rg~LvDFgL 179 (418)
T KOG1167|consen 109 QVAIVLPYFEHDRFRDLYR------SLSLAEIRWYLRNLLKALAHLHKNG---IVHRDIKPSNFLYNRRTQRGVLVDFGL 179 (418)
T ss_pred eeEEEecccCccCHHHHHh------cCCHHHHHHHHHHHHHHhhhhhccC---ccccCCCccccccccccCCceEEechh
Confidence 6889999999988888774 3556888999999999999999998 9999999999999854 6789999999
Q ss_pred eeeccCCC------C-----cC-----------------C-Cc---------cccCCCCCCCCCCCcccccc-CCCCcch
Q 003703 601 CRLVTEDT------L-----YL-----------------P-SF---------HRSTAPKGSFPYADPEYHRT-GVLTPKS 641 (801)
Q Consensus 601 a~~~~~~~------~-----~~-----------------~-~~---------~~~~~~~Gt~~Y~APE~~~~-~~~s~ks 641 (801)
|....... . .. + .+ ......+||+||.|||++.. +..++++
T Consensus 180 A~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~Qttai 259 (418)
T KOG1167|consen 180 AQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAI 259 (418)
T ss_pred HHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCcc
Confidence 97211000 0 00 0 00 01124579999999998755 4578999
Q ss_pred hHHhHHHHHHHHHhCCCCCCC----------------hhHHH-HHhhcCc--ccc---------c------cC-----C-
Q 003703 642 DSYSFGLIILQLLTGRLPVGL----------------AGEVR-RAVSCGK--LSS---------I------LD-----P- 681 (801)
Q Consensus 642 DVwSlGvvL~ELltG~~Pf~~----------------~~~~~-~~~~~g~--~~~---------~------~d-----~- 681 (801)
||||.|||++-+++++.||-. ...++ .+...|. +.+ + ++ +
T Consensus 260 Diws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~ 339 (418)
T KOG1167|consen 260 DIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKS 339 (418)
T ss_pred ceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccc
Confidence 999999999999999999831 11111 1112222 111 0 00 0
Q ss_pred -----CCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHH
Q 003703 682 -----LAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVK 718 (801)
Q Consensus 682 -----~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~ 718 (801)
....|....+..+++|..+|+..||.+|.+..+.|.+
T Consensus 340 ~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkH 381 (418)
T KOG1167|consen 340 RQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKH 381 (418)
T ss_pred cccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcC
Confidence 0112233344578999999999999999999865544
No 406
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.90 E-value=3.7e-23 Score=204.98 Aligned_cols=274 Identities=22% Similarity=0.267 Sum_probs=208.9
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCC-CceeeEecccc--CCcceeeec
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQH-PHLVTLLGACP--EAWSLVYEY 529 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~H-pnIV~l~g~~~--~~~~LV~E~ 529 (801)
..|...++||.|+||.+|.|... |..||||+-....... .+..|..+...|++ ..|..+..+.. +...|||+.
T Consensus 15 gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~hp--qL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdL 92 (341)
T KOG1163|consen 15 GKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKHP--QLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDL 92 (341)
T ss_pred cceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCCc--chhHHHHHHHHhccCCCCchhhhhccccccceeeeec
Confidence 56888999999999999999774 9999999976554333 45678899999975 45655555553 457799999
Q ss_pred CCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCC---CCeeeecccceeeccC
Q 003703 530 LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSE---LSSKICDFGICRLVTE 606 (801)
Q Consensus 530 ~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~---~~vKL~DFGla~~~~~ 606 (801)
+ |.||++++.-+. ..++..+++-++.|++.-++|+|..+ +|||||||+|+|..-+ ..+.|+|||+|+.+.+
T Consensus 93 L-GPsLEdLfnfC~--R~ftmkTvLMLaDQml~RiEyvH~r~---fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d 166 (341)
T KOG1163|consen 93 L-GPSLEDLFNFCS--RRFTMKTVLMLADQMLSRIEYVHLRN---FIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRD 166 (341)
T ss_pred c-CccHHHHHHHHh--hhhhHHhHHHHHHHHHHHHHHHHhhc---cccccCCccceeeccccccceEEEEeccchhhhcc
Confidence 8 899999887665 46888999999999999999999988 9999999999998644 4589999999998765
Q ss_pred CCCc-CCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhH-----HHHHhhcCccccccC
Q 003703 607 DTLY-LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE-----VRRAVSCGKLSSILD 680 (801)
Q Consensus 607 ~~~~-~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~-----~~~~~~~g~~~~~~d 680 (801)
.... ...+.......||..|.+--.+.+-..+.+.|+-|+|.+|.++.-|..||..... -.+.+.+.++...+.
T Consensus 167 ~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s~~ie 246 (341)
T KOG1163|consen 167 IRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMSTPIE 246 (341)
T ss_pred ccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhcCCCHH
Confidence 4322 1234456788999999999888888889999999999999999999999974332 223344445544444
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHHhhhcccCCCCCcccchhhh
Q 003703 681 PLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHVAEERPVPSFFLCPILQ 741 (801)
Q Consensus 681 ~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~l~~~~~~~~p~~~l~pilq 741 (801)
..+..+|. ++...+..|-....++-|+.. .+.+.+.-+-........-.+.|..++
T Consensus 247 ~LC~G~P~----EF~myl~Y~R~L~F~E~Pdy~-ylrqlFriLfr~ln~~~d~iyDW~~lk 302 (341)
T KOG1163|consen 247 VLCKGFPA----EFAMYLNYCRGLGFEEKPDYM-YLRQLFRILFRTLNHQYDYIYDWTMLK 302 (341)
T ss_pred HHhCCCcH----HHHHHHHHHhhcCCCCCCcHH-HHHHHHHHHHhhccccCCeEeeHHHHH
Confidence 44555554 666778889999999999998 777777665444443333333444444
No 407
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.90 E-value=1.6e-22 Score=208.69 Aligned_cols=258 Identities=21% Similarity=0.255 Sum_probs=197.4
Q ss_pred hcCccccceeeecCceEEEEEEE--CCeEEEEEEeccCCcccHHHHHHHHHHHhcC-CCCceeeEeccccC--Ccceeee
Q 003703 454 TCNFSESFKVGQGGFGCVYKGEM--LGRTVAIKMLYSHNMQGQLEFQQEVRVLSKL-QHPHLVTLLGACPE--AWSLVYE 528 (801)
Q Consensus 454 t~~f~~~~~LG~G~fG~Vy~g~~--~g~~vAiK~l~~~~~~~~~~f~~E~~il~~l-~HpnIV~l~g~~~~--~~~LV~E 528 (801)
.-+|..+++||+|+||.++.|+. .+..||||.-...+.. -++..|......| ..++|...|.+-++ ...||+|
T Consensus 27 G~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~A--PQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVid 104 (449)
T KOG1165|consen 27 GPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEA--PQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVID 104 (449)
T ss_pred cccceeccccccCcceeeecccccccCceEEEEeccccCCc--chHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhh
Confidence 45899999999999999999976 4999999975443322 2456788888777 57888888766555 4679999
Q ss_pred cCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCC-----CCeeeecccceee
Q 003703 529 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSE-----LSSKICDFGICRL 603 (801)
Q Consensus 529 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~-----~~vKL~DFGla~~ 603 (801)
.+ |.||+|++.-++ ..|+..+++.|+.|++.-++|+|+.. +|.|||||+|+||..- ..+.|+|||+|+.
T Consensus 105 LL-GPSLEDLFD~Cg--R~FSvKTV~miA~Qmi~rie~vH~k~---LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~ 178 (449)
T KOG1165|consen 105 LL-GPSLEDLFDLCG--RRFSVKTVAMIAKQMITRIEYVHEKD---LIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKE 178 (449)
T ss_pred hh-CcCHHHHHHHhc--CcccHHhHHHHHHHHHHHHHHHHhcc---eeecccCccceeecCCCCCCCceEEEEeccchhh
Confidence 98 899999887665 46889999999999999999999988 9999999999999754 3489999999998
Q ss_pred ccCCCCcC-CCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhH-----HHHHhhcCcccc
Q 003703 604 VTEDTLYL-PSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGE-----VRRAVSCGKLSS 677 (801)
Q Consensus 604 ~~~~~~~~-~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~-----~~~~~~~g~~~~ 677 (801)
..+..... ..+.......||..||+---..+...+.+.|.-|||=|+++.|-|..||..... -.+.+.+.+...
T Consensus 179 YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr~T 258 (449)
T KOG1165|consen 179 YRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKRST 258 (449)
T ss_pred hcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhccccccC
Confidence 87654432 234556788999999999999999999999999999999999999999974321 122222222222
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHHhh
Q 003703 678 ILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLH 724 (801)
Q Consensus 678 ~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~l~ 724 (801)
.++..+..+| .++..-+...-..+..+-|+.. .+...+..+.
T Consensus 259 ~i~~Lc~g~P----~efa~Yl~yvR~L~F~E~PDYd-ylr~Lf~dvl 300 (449)
T KOG1165|consen 259 PIEVLCEGFP----EEFATYLRYVRRLDFFETPDYD-YLRKLFDDVL 300 (449)
T ss_pred CHHHHHhcCH----HHHHHHHHHHHhcCcccCCCHH-HHHHHHHHHH
Confidence 2222233344 4556666667788889999987 6666665543
No 408
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.89 E-value=5.7e-23 Score=225.73 Aligned_cols=172 Identities=19% Similarity=0.211 Sum_probs=132.5
Q ss_pred HHHHHhcCccccceeeecCceEEEEEEEC---CeEEEEEEeccCC-----cccHHHHHHHHHHHhcCCCCceee-Eeccc
Q 003703 449 DLQTATCNFSESFKVGQGGFGCVYKGEML---GRTVAIKMLYSHN-----MQGQLEFQQEVRVLSKLQHPHLVT-LLGAC 519 (801)
Q Consensus 449 el~~at~~f~~~~~LG~G~fG~Vy~g~~~---g~~vAiK~l~~~~-----~~~~~~f~~E~~il~~l~HpnIV~-l~g~~ 519 (801)
.....-.+|.....||+|+||.||+|.+. +..||||++.... ......|.+|+.+|.+++|+|+|+ ++++
T Consensus 12 ~~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~- 90 (365)
T PRK09188 12 QIPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT- 90 (365)
T ss_pred ccccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc-
Confidence 34456678999999999999999999873 6778999875331 112445899999999999999985 5443
Q ss_pred cCCcceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCC-CCCCeeecCCCCeeeecc
Q 003703 520 PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDL-KPQNILLDSELSSKICDF 598 (801)
Q Consensus 520 ~~~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDI-Kp~NILLd~~~~vKL~DF 598 (801)
...+|||||++|++|.. + ... . ...++.+++.||.|||+.+ |+|||| ||+|||++.++.+||+||
T Consensus 91 -~~~~LVmE~~~G~~L~~-~-~~~--~------~~~~~~~i~~aL~~lH~~g---IiHrDL~KP~NILv~~~~~ikLiDF 156 (365)
T PRK09188 91 -GKDGLVRGWTEGVPLHL-A-RPH--G------DPAWFRSAHRALRDLHRAG---ITHNDLAKPQNWLMGPDGEAAVIDF 156 (365)
T ss_pred -CCcEEEEEccCCCCHHH-h-Ccc--c------hHHHHHHHHHHHHHHHHCC---CeeCCCCCcceEEEcCCCCEEEEEC
Confidence 45789999999999963 2 110 1 1467889999999999987 999999 999999999999999999
Q ss_pred cceeeccCCCCcCC--CccccCCCCCCCCCCCccccccC
Q 003703 599 GICRLVTEDTLYLP--SFHRSTAPKGSFPYADPEYHRTG 635 (801)
Q Consensus 599 Gla~~~~~~~~~~~--~~~~~~~~~Gt~~Y~APE~~~~~ 635 (801)
|+|+.+........ .+..-+...|++.|+|||++...
T Consensus 157 GlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 157 QLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred ccceecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 99998765432111 11112467799999999988643
No 409
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.89 E-value=2.9e-22 Score=219.40 Aligned_cols=261 Identities=23% Similarity=0.274 Sum_probs=192.0
Q ss_pred CccccceeeecCceEEEEEEECC---eEEEEEEeccCCcccHHHHHHHHHHHhcCCC----CceeeEecccc---CCcce
Q 003703 456 NFSESFKVGQGGFGCVYKGEMLG---RTVAIKMLYSHNMQGQLEFQQEVRVLSKLQH----PHLVTLLGACP---EAWSL 525 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~g---~~vAiK~l~~~~~~~~~~f~~E~~il~~l~H----pnIV~l~g~~~---~~~~L 525 (801)
+|....+||+|+||.||.+.... ..+|+|............+..|+.++..+.. +++..+++... ...++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 78999999999999999998863 4799998876544333367789999988863 57777776662 34689
Q ss_pred eeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCC-----CCeeeecccc
Q 003703 526 VYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSE-----LSSKICDFGI 600 (801)
Q Consensus 526 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~-----~~vKL~DFGl 600 (801)
||+.+ |.+|.++..... ...++..+.++|+.|++.+|.+||+.| ++||||||+|+++... ..+.|.|||+
T Consensus 99 VM~l~-G~sL~dl~~~~~-~~~fs~~T~l~ia~q~l~~l~~lH~~G---~iHRDiKp~N~~~g~~~~~~~~~~~llDfGl 173 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNP-PGRFSRKTVLRIAIQNLNALEDLHSKG---FIHRDIKPENFVVGQSSRSEVRTLYLLDFGL 173 (322)
T ss_pred EEecc-CccHHHHHHhCC-CCCcCHhHHHHHHHHHHHHHHHHHhcC---cccCCcCHHHeeecCCCCcccceEEEEecCC
Confidence 99988 899999775544 467899999999999999999999998 9999999999999865 4699999999
Q ss_pred ee--eccCCCCc--CCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHH--HHHhhcCc
Q 003703 601 CR--LVTEDTLY--LPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEV--RRAVSCGK 674 (801)
Q Consensus 601 a~--~~~~~~~~--~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~--~~~~~~g~ 674 (801)
++ ........ .+.-.......||..|.++..+.+...+.+.|+||+++++.+|+.|..||...... ...+....
T Consensus 174 ar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~ 253 (322)
T KOG1164|consen 174 ARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDP 253 (322)
T ss_pred CccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHh
Confidence 98 33222211 11111123456999999999999999999999999999999999999999643321 11111111
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHHhhhc
Q 003703 675 LSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQLHVA 726 (801)
Q Consensus 675 ~~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~l~~~ 726 (801)
....... .....+..+..+...+-..+..++|.+. .+...|......
T Consensus 254 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~Pdy~-~~~~~l~~~~~~ 300 (322)
T KOG1164|consen 254 RKLLTDR----FGDLKPEEFAKILEYIDSLDYEDKPDYE-KLAELLKDVFDS 300 (322)
T ss_pred hhhcccc----ccCCChHHHHHHHHHhhccCCcCCCCHH-HHHHHHHHHHHh
Confidence 1111111 1122334566666677779999999998 677776665443
No 410
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.88 E-value=5e-21 Score=204.37 Aligned_cols=260 Identities=29% Similarity=0.410 Sum_probs=196.0
Q ss_pred ccccceeeecCceEEEEEEECCeEEEEEEeccCCccc---HHHHHHHHHHHhcCCCC-ceeeEeccccCC--cceeeecC
Q 003703 457 FSESFKVGQGGFGCVYKGEMLGRTVAIKMLYSHNMQG---QLEFQQEVRVLSKLQHP-HLVTLLGACPEA--WSLVYEYL 530 (801)
Q Consensus 457 f~~~~~LG~G~fG~Vy~g~~~g~~vAiK~l~~~~~~~---~~~f~~E~~il~~l~Hp-nIV~l~g~~~~~--~~LV~E~~ 530 (801)
|.....||.|+||.||++... ..+++|.+....... ...|.+|+.++..+.|+ +++++++.+... .+++++|+
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~-~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 80 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR-KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYV 80 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec-cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEecC
Confidence 455678999999999999888 889999987665433 55799999999999988 799999888443 48999999
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCC-CeeeecccceeeccCCCC
Q 003703 531 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSEL-SSKICDFGICRLVTEDTL 609 (801)
Q Consensus 531 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~-~vKL~DFGla~~~~~~~~ 609 (801)
.++++.+.+........+.......++.+++.++.|+|..+ ++|||+||+||+++..+ .++++|||+++.......
T Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~---~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~ 157 (384)
T COG0515 81 DGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKG---IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGS 157 (384)
T ss_pred CCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeecCCCCeEEEeccCcceecCCCCc
Confidence 99999966544321125778899999999999999999988 99999999999999998 699999999986654332
Q ss_pred cCCCccccCCCCCCCCCCCcccccc---CCCCcchhHHhHHHHHHHHHhCCCCCCChh------HHHHHhhcCccccccC
Q 003703 610 YLPSFHRSTAPKGSFPYADPEYHRT---GVLTPKSDSYSFGLIILQLLTGRLPVGLAG------EVRRAVSCGKLSSILD 680 (801)
Q Consensus 610 ~~~~~~~~~~~~Gt~~Y~APE~~~~---~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~------~~~~~~~~g~~~~~~d 680 (801)
............||..|++||.+.. ..++...|+||+|++++++++|..||.... .....+..........
T Consensus 158 ~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (384)
T COG0515 158 TSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLAS 237 (384)
T ss_pred cccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCccccc
Confidence 1100012466789999999999887 578999999999999999999999986443 2222222221110000
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHH
Q 003703 681 PLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKEL 720 (801)
Q Consensus 681 ~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L 720 (801)
......+......+.+++..|+..+|..|.+........+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 277 (384)
T COG0515 238 PLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDL 277 (384)
T ss_pred ccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhchH
Confidence 0011111223357889999999999999999886555433
No 411
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.87 E-value=1.5e-22 Score=203.42 Aligned_cols=253 Identities=23% Similarity=0.419 Sum_probs=193.3
Q ss_pred ccCHHHHHHHhcCccccceeeecCceEEEEEEECCeEEEEEEeccCCccc--HHHHHHHHHHHhcCCCCceeeEeccccC
Q 003703 444 EFSLADLQTATCNFSESFKVGQGGFGCVYKGEMLGRTVAIKMLYSHNMQG--QLEFQQEVRVLSKLQHPHLVTLLGACPE 521 (801)
Q Consensus 444 ~~~~~el~~at~~f~~~~~LG~G~fG~Vy~g~~~g~~vAiK~l~~~~~~~--~~~f~~E~~il~~l~HpnIV~l~g~~~~ 521 (801)
-+++.+|...| +|.+...|..|+|++.|..++.|+++...... ...|..|.-.|+.+.||||+.++|+|..
T Consensus 186 gid~~~lnl~t-------kl~e~hsgelwrgrwqgndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacns 258 (448)
T KOG0195|consen 186 GIDVSSLNLIT-------KLAESHSGELWRGRWQGNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNS 258 (448)
T ss_pred Ccchhhhhhhh-------hhccCCCcccccccccCcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccC
Confidence 34566665555 48999999999999999999999987654432 3469999999999999999999999954
Q ss_pred --CcceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceee-CCCCCCCeeecCCCCeeeecc
Q 003703 522 --AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVH-GDLKPQNILLDSELSSKICDF 598 (801)
Q Consensus 522 --~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiH-rDIKp~NILLd~~~~vKL~DF 598 (801)
...++..|||.|||...|+...+ -..+-.++.+++.+|++|+.|||+..| +|- --|.+..|++|++.+++|+=
T Consensus 259 ppnlv~isq~mp~gslynvlhe~t~-vvvd~sqav~faldiargmaflhslep--~ipr~~lns~hvmidedltarism- 334 (448)
T KOG0195|consen 259 PPNLVIISQYMPFGSLYNVLHEQTS-VVVDHSQAVRFALDIARGMAFLHSLEP--MIPRFYLNSKHVMIDEDLTARISM- 334 (448)
T ss_pred CCCceEeeeeccchHHHHHHhcCcc-EEEecchHHHHHHHHHhhHHHHhhcch--hhhhhhcccceEEecchhhhheec-
Confidence 56789999999999999987653 234557789999999999999999984 444 35888999999999888762
Q ss_pred cceeeccCCCCcCCCccccCCCCCCCCCCCccccccCCCC---cchhHHhHHHHHHHHHhCCCCCCChhHHHHHhhcCcc
Q 003703 599 GICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLT---PKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKL 675 (801)
Q Consensus 599 Gla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s---~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~g~~ 675 (801)
+-++. ++ ......-.|.||+||.+...+-+ ..+|+|||.++||||.|...||.....+..-.+
T Consensus 335 ad~kf---------sf-qe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmk---- 400 (448)
T KOG0195|consen 335 ADTKF---------SF-QEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMK---- 400 (448)
T ss_pred cccee---------ee-eccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhh----
Confidence 11111 00 01222346789999998776544 479999999999999999999975554332111
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHHh
Q 003703 676 SSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 723 (801)
Q Consensus 676 ~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~l 723 (801)
-.+.......|+..+..+.+|+.-|++.||.+||.+. .++..|+.+
T Consensus 401 -ialeglrv~ippgis~hm~klm~icmnedpgkrpkfd-mivpilekm 446 (448)
T KOG0195|consen 401 -IALEGLRVHIPPGISRHMNKLMNICMNEDPGKRPKFD-MIVPILEKM 446 (448)
T ss_pred -hhhccccccCCCCccHHHHHHHHHHhcCCCCcCCCcc-eehhhHHHh
Confidence 1122223456777889999999999999999999998 777777754
No 412
>cd01989 STK_N The N-terminal domain of Eukaryotic Serine Threonine kinases. The Serine Threonine kinases are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. The N-terminal domain is homologous to the USP family which has a ATP binding fold. The N-terminal domain is predicted to be involved in ATP binding.
Probab=99.85 E-value=1.8e-20 Score=180.90 Aligned_cols=136 Identities=38% Similarity=0.562 Sum_probs=115.7
Q ss_pred EEEEEecCCcccchhhHHHHhhhcC--CCceEEEEc-CC-CC-C----cHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCe
Q 003703 24 KVYVALGKCVEKGLSLLHWTLQRFG--SSREILGKL-PA-SQ-A----SAEVLSAFRAEERQKMKKLLDNYLRICVEAEV 94 (801)
Q Consensus 24 ~V~VaVd~~~~~~~~Al~Wal~n~~--~~~~~~~~v-~~-~~-~----~~~~~~~~~~~~~~~~~~ll~~~~~~C~~~~v 94 (801)
+|+||||+|. .++.||.||++... +.+++++|| +. .. . ..+....+....++.++++|+++...|...++
T Consensus 1 ~ILVavD~S~-~s~~al~~a~~~a~~~~~~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 79 (146)
T cd01989 1 SVAVAVDKDK-KSKNALKWALDNLATKGQTIVLVHVHPPITSIPSSSGKLEVASAYKQEEDKEAKELLLPYRCFCSRKGV 79 (146)
T ss_pred CEEEEecCcc-ccHHHHHHHHHhccCCCCcEEEEEeccCcccCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 5899999965 55569999999876 778999999 21 11 1 11234556667778899999999999999999
Q ss_pred eeEEEEEecCCHHHHHHHHHHHhCCCEEEeccCCCCccchhc-CCChhhHHHhhCCCCceEEEEeCC
Q 003703 95 KARIITTEADKIQKAIVQLMNIHGIQKLVMGAFPDNCMKVKM-GSRKASYAAKNAPMFCEIWFVNKG 160 (801)
Q Consensus 95 ~~~~~~~e~~d~~~~I~~~i~~~~i~~LV~G~~~~~~~~r~~-~~~vs~~v~~~a~~~C~V~vv~kg 160 (801)
+++++++++++++++|+++++++++|.||||++|++.+.|.+ +|+|+++|+++||.+|+|+||++|
T Consensus 80 ~~~~~~~~g~~~~~~I~~~a~~~~~dlIV~Gs~g~~~l~~~~~gssva~~Vi~~a~~~c~Vlvv~~~ 146 (146)
T cd01989 80 QCEDVVLEDDDVAKAIVEYVADHGITKLVMGASSDNHFSMKFKKSDVASSVLKEAPDFCTVYVVSKG 146 (146)
T ss_pred eEEEEEEeCCcHHHHHHHHHHHcCCCEEEEeccCCCceeecccCCchhHHHHhcCCCCceEEEEeCc
Confidence 999999888899999999999999999999999999999885 568999999999999999999998
No 413
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.81 E-value=1.5e-20 Score=192.86 Aligned_cols=170 Identities=14% Similarity=0.084 Sum_probs=133.6
Q ss_pred HHhcCccccceeeecCceEEEEEEECCeEEEEEEeccCCcccHHH---------HHHHHHHHhcCCCCceeeEecccc--
Q 003703 452 TATCNFSESFKVGQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLE---------FQQEVRVLSKLQHPHLVTLLGACP-- 520 (801)
Q Consensus 452 ~at~~f~~~~~LG~G~fG~Vy~g~~~g~~vAiK~l~~~~~~~~~~---------f~~E~~il~~l~HpnIV~l~g~~~-- 520 (801)
...++|...+.||.|+||.||.....+..+|||++.+........ |.+|+..+.++.||+|..+..++.
T Consensus 28 ~l~~~y~~~~~l~~~~f~~v~l~~~~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~ 107 (232)
T PRK10359 28 FLSYNIKTIKVFRNIDDTKVSLIDTDYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA 107 (232)
T ss_pred HhhCceEEEEEecCCCceEEEEEecCCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence 346889999999999999999977778899999997654433332 679999999999999999877642
Q ss_pred --------CCcceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCC
Q 003703 521 --------EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELS 592 (801)
Q Consensus 521 --------~~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~ 592 (801)
...+|||||++|.+|.+... ++. ....+++.+|..||..+ ++|||+||+||+++.+|
T Consensus 108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~~-------~~~----~~~~~i~~~l~~lH~~g---i~H~Dikp~Nili~~~g- 172 (232)
T PRK10359 108 ERKTLRYAHTYIMLIEYIEGVELNDMPE-------ISE----DVKAKIKASIESLHQHG---MVSGDPHKGNFIVSKNG- 172 (232)
T ss_pred ccccccccCCeEEEEEEECCccHHHhhh-------ccH----HHHHHHHHHHHHHHHcC---CccCCCChHHEEEeCCC-
Confidence 23689999999999988631 221 24568999999999988 99999999999999988
Q ss_pred eeeecccceeeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHH
Q 003703 593 SKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLL 654 (801)
Q Consensus 593 vKL~DFGla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELl 654 (801)
++|+|||..+........ ..++....|+.++|+|||||.+..+.
T Consensus 173 i~liDfg~~~~~~e~~a~------------------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 173 LRIIDLSGKRCTAQRKAK------------------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred EEEEECCCcccccchhhH------------------HHHHHHhHhcccccccceeEeehHHH
Confidence 999999987655322110 11445556778999999999987653
No 414
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.81 E-value=5.1e-20 Score=185.96 Aligned_cols=137 Identities=18% Similarity=0.224 Sum_probs=106.4
Q ss_pred ceeeecCceEEEEEEEC-CeEEEEEEeccCCcc--c-------HHH-----------------HHHHHHHHhcCCCCcee
Q 003703 461 FKVGQGGFGCVYKGEML-GRTVAIKMLYSHNMQ--G-------QLE-----------------FQQEVRVLSKLQHPHLV 513 (801)
Q Consensus 461 ~~LG~G~fG~Vy~g~~~-g~~vAiK~l~~~~~~--~-------~~~-----------------f~~E~~il~~l~HpnIV 513 (801)
..||+|+||.||+|... |+.||||+++..... . ... ...|+.+|.++.++++.
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v~ 82 (190)
T cd05147 3 GCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGIP 82 (190)
T ss_pred CccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 47999999999999875 999999999764321 1 011 23499999999877764
Q ss_pred eEeccccCCcceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHH-HhcCCCceeeCCCCCCCeeecCCCC
Q 003703 514 TLLGACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFL-HSSKPEKIVHGDLKPQNILLDSELS 592 (801)
Q Consensus 514 ~l~g~~~~~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yL-H~~~~~~iiHrDIKp~NILLd~~~~ 592 (801)
..+.......+|||||++++++...+... ..+++...+.++.|++.+|.|| |+.+ |+||||||+|||++ ++.
T Consensus 83 ~p~~~~~~~~~iVmE~i~g~~l~~~~~~~---~~~~~~~~~~i~~qi~~~L~~l~H~~g---iiHrDlkP~NIli~-~~~ 155 (190)
T cd05147 83 CPEPILLKSHVLVMEFIGDDGWAAPRLKD---APLSESKARELYLQVIQIMRILYQDCR---LVHADLSEYNLLYH-DGK 155 (190)
T ss_pred CCcEEEecCCEEEEEEeCCCCCcchhhhc---CCCCHHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEE-CCc
Confidence 33322223458999999988776543322 3578899999999999999999 6877 99999999999998 478
Q ss_pred eeeecccceeec
Q 003703 593 SKICDFGICRLV 604 (801)
Q Consensus 593 vKL~DFGla~~~ 604 (801)
++|+|||+|...
T Consensus 156 v~LiDFG~a~~~ 167 (190)
T cd05147 156 LYIIDVSQSVEH 167 (190)
T ss_pred EEEEEccccccC
Confidence 999999998754
No 415
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.81 E-value=1.1e-20 Score=211.12 Aligned_cols=222 Identities=27% Similarity=0.339 Sum_probs=179.6
Q ss_pred eeecCceEEEEE-----EECCeEEEEEEeccCCccc--HHHHHHHHHHHhcCC-CCceeeEecccc--CCcceeeecCCC
Q 003703 463 VGQGGFGCVYKG-----EMLGRTVAIKMLYSHNMQG--QLEFQQEVRVLSKLQ-HPHLVTLLGACP--EAWSLVYEYLPN 532 (801)
Q Consensus 463 LG~G~fG~Vy~g-----~~~g~~vAiK~l~~~~~~~--~~~f~~E~~il~~l~-HpnIV~l~g~~~--~~~~LV~E~~~~ 532 (801)
+|.|.||.|+.+ ...|..+|+|++++..... ......|..++..++ ||.+|++..++. ...+++++|..|
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rg 81 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRG 81 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhccc
Confidence 799999999864 3347889999997765422 124567888999997 999999998874 458999999999
Q ss_pred CchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCC
Q 003703 533 GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLP 612 (801)
Q Consensus 533 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~ 612 (801)
|.|..++.... .+...........++-+++++|..+ |+|||+|++||+++.+|++++.|||+++..-...
T Consensus 82 g~lft~l~~~~---~f~~~~~~~~~aelaLald~lh~l~---iiyrd~k~enilld~~Ghi~~tdfglske~v~~~---- 151 (612)
T KOG0603|consen 82 GDLFTRLSKEV---MFDELDVAFYLAELALALDHLHKLG---IAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEK---- 151 (612)
T ss_pred chhhhccccCC---chHHHHHHHHHHHHHHHHhhcchhH---HHHhcccccceeecccCccccCCchhhhHhHhhh----
Confidence 99988886543 4555666777889999999999998 9999999999999999999999999998765432
Q ss_pred CccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhhcCccccccCCCCCCCCHHHHH
Q 003703 613 SFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFVAR 692 (801)
Q Consensus 613 ~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~g~~~~~~d~~~~~~~~~~~~ 692 (801)
..+||..|||||++. .+....|+||||++++||+||..||.. .+...+-. .....|.+.+.
T Consensus 152 ------~~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~--~~~~~Il~---------~~~~~p~~l~~ 212 (612)
T KOG0603|consen 152 ------IACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG--DTMKRILK---------AELEMPRELSA 212 (612)
T ss_pred ------hcccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch--HHHHHHhh---------hccCCchhhhH
Confidence 228999999999998 678899999999999999999999976 22221111 12346777888
Q ss_pred HHHHHHHHhhhhCCCCCCCch
Q 003703 693 RLVDLGLQCCELYGRERPDIT 713 (801)
Q Consensus 693 ~l~~Li~~Cl~~dP~~RPt~~ 713 (801)
....++..+...+|..|--..
T Consensus 213 ~a~~~~~~l~~r~p~nrLg~~ 233 (612)
T KOG0603|consen 213 EARSLFRQLFKRNPENRLGAG 233 (612)
T ss_pred HHHHHHHHHHhhCHHHHhccC
Confidence 888999999999999997664
No 416
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.81 E-value=7.7e-20 Score=183.96 Aligned_cols=189 Identities=17% Similarity=0.101 Sum_probs=141.8
Q ss_pred cccceeeecCceEEEEEEECCeEEEEEEeccCCccc----HHHHHHHHHHHhcCC-CCceeeEeccccCCcceeeecCCC
Q 003703 458 SESFKVGQGGFGCVYKGEMLGRTVAIKMLYSHNMQG----QLEFQQEVRVLSKLQ-HPHLVTLLGACPEAWSLVYEYLPN 532 (801)
Q Consensus 458 ~~~~~LG~G~fG~Vy~g~~~g~~vAiK~l~~~~~~~----~~~f~~E~~il~~l~-HpnIV~l~g~~~~~~~LV~E~~~~ 532 (801)
.....||+|+||+||.+...+.+++.+.+.....-. ...|.+|+++|.+|. |+++++++++ +..+++|+|+.|
T Consensus 5 ~~~~~l~~~~f~~v~~~~~~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~--~~~~lvmeyI~G 82 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRGGERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW--DGRHLDRSYLAG 82 (218)
T ss_pred ccceeecCCCcceEEEeecCCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE--cCEEEEEeeecC
Confidence 345679999999999887788999988886654411 124789999999995 5889999886 456899999999
Q ss_pred CchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCC-CCCCeeecCCCCeeeecccceeeccCCCCcC
Q 003703 533 GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDL-KPQNILLDSELSSKICDFGICRLVTEDTLYL 611 (801)
Q Consensus 533 gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDI-Kp~NILLd~~~~vKL~DFGla~~~~~~~~~~ 611 (801)
.+|...+.. ....++.+++.+|.++|..+ |+|||| ||+|||++.++.++|+|||+|..........
T Consensus 83 ~~L~~~~~~----------~~~~~~~qi~~~L~~lH~~G---IvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~ 149 (218)
T PRK12274 83 AAMYQRPPR----------GDLAYFRAARRLLQQLHRCG---VAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWM 149 (218)
T ss_pred ccHHhhhhh----------hhHHHHHHHHHHHHHHHHCc---CccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHH
Confidence 998654311 12357789999999999998 999999 7999999999999999999998654332100
Q ss_pred ---C----CccccCCCCCCCCCCCccccccC-CCC-cchhHHhHHHHHHHHHhCCCCCC
Q 003703 612 ---P----SFHRSTAPKGSFPYADPEYHRTG-VLT-PKSDSYSFGLIILQLLTGRLPVG 661 (801)
Q Consensus 612 ---~----~~~~~~~~~Gt~~Y~APE~~~~~-~~s-~ksDVwSlGvvL~ELltG~~Pf~ 661 (801)
. ..-.......++.|++|+...-- ..+ ...++++-|+.+|.++||..|+-
T Consensus 150 r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~ 208 (218)
T PRK12274 150 RLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHW 208 (218)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcc
Confidence 0 00001122378889999843221 223 67899999999999999998863
No 417
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.80 E-value=3.6e-19 Score=179.94 Aligned_cols=139 Identities=19% Similarity=0.212 Sum_probs=109.5
Q ss_pred ceeeecCceEEEEEEEC-CeEEEEEEeccCCcc--c------------------------HHHHHHHHHHHhcCCCCcee
Q 003703 461 FKVGQGGFGCVYKGEML-GRTVAIKMLYSHNMQ--G------------------------QLEFQQEVRVLSKLQHPHLV 513 (801)
Q Consensus 461 ~~LG~G~fG~Vy~g~~~-g~~vAiK~l~~~~~~--~------------------------~~~f~~E~~il~~l~HpnIV 513 (801)
..||+|+||.||+|.+. |+.||||++...... . ...+..|...+.++.|+++.
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~ 82 (190)
T cd05145 3 GCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGVP 82 (190)
T ss_pred ceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 57999999999999885 999999998765321 0 11245789999999999875
Q ss_pred eEeccccCCcceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCceeeCCCCCCCeeecCCCC
Q 003703 514 TLLGACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHS-SKPEKIVHGDLKPQNILLDSELS 592 (801)
Q Consensus 514 ~l~g~~~~~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~-~~~~~iiHrDIKp~NILLd~~~~ 592 (801)
....+.....+|||||++|+++....... ..++......|+.+++.+|.+||+ .+ |+||||||+|||++ ++.
T Consensus 83 ~p~~~~~~~~~lVmE~~~g~~~~~~~l~~---~~~~~~~~~~i~~~l~~~l~~lH~~~g---ivHrDlkP~NIll~-~~~ 155 (190)
T cd05145 83 VPEPILLKKNVLVMEFIGDDGSPAPRLKD---VPLEEEEAEELYEQVVEQMRRLYQEAG---LVHGDLSEYNILYH-DGK 155 (190)
T ss_pred CceEEEecCCEEEEEEecCCCchhhhhhh---ccCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCChhhEEEE-CCC
Confidence 44333333468999999988654432222 246678889999999999999999 77 99999999999999 889
Q ss_pred eeeecccceeeccC
Q 003703 593 SKICDFGICRLVTE 606 (801)
Q Consensus 593 vKL~DFGla~~~~~ 606 (801)
++|+|||++.....
T Consensus 156 ~~liDFG~a~~~~~ 169 (190)
T cd05145 156 PYIIDVSQAVELDH 169 (190)
T ss_pred EEEEEcccceecCC
Confidence 99999999987653
No 418
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.79 E-value=5.2e-20 Score=215.02 Aligned_cols=245 Identities=22% Similarity=0.277 Sum_probs=176.4
Q ss_pred ccceeeecCceEEEEEEEC--CeEEEEEEec----cCCcc--cHHHHHHHHHHHhcCCCCceeeEeccccC--Ccceeee
Q 003703 459 ESFKVGQGGFGCVYKGEML--GRTVAIKMLY----SHNMQ--GQLEFQQEVRVLSKLQHPHLVTLLGACPE--AWSLVYE 528 (801)
Q Consensus 459 ~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~----~~~~~--~~~~f~~E~~il~~l~HpnIV~l~g~~~~--~~~LV~E 528 (801)
....+|.|.||.|+..... ...++.|... ..... ....+..|+-+-..++|||++..+..+.+ ...-+||
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE 401 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME 401 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence 4567999999988876553 3444444332 11111 11125567778888999999877665532 2334499
Q ss_pred cCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCC
Q 003703 529 YLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDT 608 (801)
Q Consensus 529 ~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~ 608 (801)
||++ +|...+.... .+....+.-++.|++.|+.|+|+.| |.|||+||+|++++.+|.+||+|||.+..+....
T Consensus 402 ~~~~-Dlf~~~~~~~---~~~~~e~~c~fKqL~~Gv~y~h~~G---iahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~ 474 (601)
T KOG0590|consen 402 YCPY-DLFSLVMSNG---KLTPLEADCFFKQLLRGVKYLHSMG---LAHRDLKLENLLVTENGILKIIDFGAASVFRYPW 474 (601)
T ss_pred cccH-HHHHHHhccc---ccchhhhhHHHHHHHHHHHHHHhcC---ceeccCccccEEEecCCceEEeecCcceeeccCc
Confidence 9999 9999887652 4666788889999999999999998 9999999999999999999999999998765432
Q ss_pred CcCCCccccCCCCCCCCCCCccccccCCCCc-chhHHhHHHHHHHHHhCCCCCCChhHHHHH----hhcCccccccCCCC
Q 003703 609 LYLPSFHRSTAPKGSFPYADPEYHRTGVLTP-KSDSYSFGLIILQLLTGRLPVGLAGEVRRA----VSCGKLSSILDPLA 683 (801)
Q Consensus 609 ~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~-ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~----~~~g~~~~~~d~~~ 683 (801)
.. ........+|+-.|+|||++.+..|.+ ..||||.||+++.|++|+.||.....-... ...+..... ...
T Consensus 475 e~--~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~--~~~ 550 (601)
T KOG0590|consen 475 EK--NIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIF--EGP 550 (601)
T ss_pred ch--hhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccc--cCh
Confidence 11 123456788999999999999999986 699999999999999999999633321111 001111000 000
Q ss_pred CCCCHHHHHHHHHHHHHhhhhCCCCCCCchH
Q 003703 684 GDWPTFVARRLVDLGLQCCELYGRERPDITP 714 (801)
Q Consensus 684 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e 714 (801)
...-...+.....++.++|+.+|.+|-|+.+
T Consensus 551 ~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~ 581 (601)
T KOG0590|consen 551 NRLLSLLPRETRIIIYRMLQLDPTKRITIEQ 581 (601)
T ss_pred HHHHHhchhhHHHHHHHHccCChhheecHHH
Confidence 1112235567789999999999999999984
No 419
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.78 E-value=9.6e-20 Score=211.95 Aligned_cols=247 Identities=23% Similarity=0.250 Sum_probs=174.0
Q ss_pred CccccceeeecCceEEEEEEECCeEEEEEEeccCCc-ccHHHHHHHHHH--HhcCCCCceeeEeccc--cCCcceeeecC
Q 003703 456 NFSESFKVGQGGFGCVYKGEMLGRTVAIKMLYSHNM-QGQLEFQQEVRV--LSKLQHPHLVTLLGAC--PEAWSLVYEYL 530 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~g~~vAiK~l~~~~~-~~~~~f~~E~~i--l~~l~HpnIV~l~g~~--~~~~~LV~E~~ 530 (801)
+|...+.||.+.|=.|.+|+++...|+||++.+... -....|.+.+.- ...++|||++++.-+- ....|||-+|+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqyv 103 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGLVVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQYV 103 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCceEEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHHH
Confidence 566667899999999999999866699999876553 223334433332 4556999999987654 23467888998
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceee--ccCCC
Q 003703 531 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRL--VTEDT 608 (801)
Q Consensus 531 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~--~~~~~ 608 (801)
..+|.|+|.-+ +-+..-+...|+.|++.||.-+|..+ |+|+|||.+||||+.-+-+.|+||..-|- ++.+.
T Consensus 104 -khnLyDRlSTR---PFL~~iEKkWiaFQLL~al~qcH~~g---VcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDN 176 (1431)
T KOG1240|consen 104 -KHNLYDRLSTR---PFLVLIEKKWIAFQLLKALSQCHKLG---VCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDN 176 (1431)
T ss_pred -hhhhhhhhccc---hHHHHHHHHHHHHHHHHHHHHHHHcC---ccccccccceEEEeeechhhhhcccccCCccCCCCC
Confidence 56898888432 34556677789999999999999998 99999999999999998999999976553 33333
Q ss_pred CcCCCccccCCCCCCCCCCCccccccC----------C-CCcchhHHhHHHHHHHHHh-CCCCCCChhHHHHHhhcCccc
Q 003703 609 LYLPSFHRSTAPKGSFPYADPEYHRTG----------V-LTPKSDSYSFGLIILQLLT-GRLPVGLAGEVRRAVSCGKLS 676 (801)
Q Consensus 609 ~~~~~~~~~~~~~Gt~~Y~APE~~~~~----------~-~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~~~~~~g~~~ 676 (801)
.....+...+.. .-.+|+|||.|... . ++++.||||+||++.||++ |++||.+..-. +++.|. .
T Consensus 177 Padf~fFFDTSr-RRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~--aYr~~~-~ 252 (1431)
T KOG1240|consen 177 PADFTFFFDTSR-RRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLL--AYRSGN-A 252 (1431)
T ss_pred cccceEEEecCC-ceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHH--hHhccC-c
Confidence 222223233332 33479999977432 2 7889999999999999999 78999754321 222221 1
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHH
Q 003703 677 SILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSL 716 (801)
Q Consensus 677 ~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l 716 (801)
......+... ....+.+|++.|++.||..|-++.+.|
T Consensus 253 ~~~e~~Le~I---ed~~~Rnlil~Mi~rdPs~RlSAedyL 289 (1431)
T KOG1240|consen 253 DDPEQLLEKI---EDVSLRNLILSMIQRDPSKRLSAEDYL 289 (1431)
T ss_pred cCHHHHHHhC---cCccHHHHHHHHHccCchhccCHHHHH
Confidence 0000001111 122688999999999999999998443
No 420
>PRK10345 hypothetical protein; Provisional
Probab=99.75 E-value=6.6e-18 Score=172.59 Aligned_cols=133 Identities=22% Similarity=0.291 Sum_probs=103.4
Q ss_pred cccceeeecCceEEEEEEECCeEEEEEEeccCCcccHHHHHHHHHHHhcC-----CCCceeeEeccccCC---cc---ee
Q 003703 458 SESFKVGQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKL-----QHPHLVTLLGACPEA---WS---LV 526 (801)
Q Consensus 458 ~~~~~LG~G~fG~Vy~g~~~g~~vAiK~l~~~~~~~~~~f~~E~~il~~l-----~HpnIV~l~g~~~~~---~~---LV 526 (801)
.....||+|+||.||.....+.. +||++..........+.+|+.++..+ .||||+++||++.+. .+ +|
T Consensus 5 ~~~~~LG~G~~~~Vy~hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I 83 (210)
T PRK10345 5 SEQSPLGTGRHRKCYAHPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVI 83 (210)
T ss_pred CCcceecCCCceEEEECCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEE
Confidence 44568999999999963223444 69998765555566799999999999 579999999998553 12 68
Q ss_pred eec--CCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHH-HHHHhcCCCceeeCCCCCCCeeecC----CCCeeeeccc
Q 003703 527 YEY--LPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGL-CFLHSSKPEKIVHGDLKPQNILLDS----ELSSKICDFG 599 (801)
Q Consensus 527 ~E~--~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL-~yLH~~~~~~iiHrDIKp~NILLd~----~~~vKL~DFG 599 (801)
+|| +++|+|.+++.+. .++.. ..++.+++.++ .|||+++ |+||||||+|||++. ++.++|+||+
T Consensus 84 ~e~~G~~~~tL~~~l~~~----~~~e~--~~~~~~~L~~l~~yLh~~~---IvhrDlKp~NILl~~~~~~~~~~~LiDg~ 154 (210)
T PRK10345 84 ADFDGKPSITLTEFAEQC----RYEED--VAQLRQLLKKLKRYLLDNR---IVTMELKPQNILCQRISESEVIPVVCDNI 154 (210)
T ss_pred ecCCCCcchhHHHHHHcc----cccHh--HHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEeccCCCCCcEEEEECC
Confidence 999 5579999999552 24444 35677888887 9999988 999999999999974 3479999954
Q ss_pred c
Q 003703 600 I 600 (801)
Q Consensus 600 l 600 (801)
-
T Consensus 155 G 155 (210)
T PRK10345 155 G 155 (210)
T ss_pred C
Confidence 3
No 421
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.74 E-value=8.7e-18 Score=177.58 Aligned_cols=229 Identities=22% Similarity=0.325 Sum_probs=146.9
Q ss_pred ccccceeeecCceEEEEEEEC--CeEEEEEEeccCCc---ccHHHHHHHHHHHhcCCC---C--------ce-----eeE
Q 003703 457 FSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNM---QGQLEFQQEVRVLSKLQH---P--------HL-----VTL 515 (801)
Q Consensus 457 f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~---~~~~~f~~E~~il~~l~H---p--------nI-----V~l 515 (801)
+.....||.|+|+.||.+++. |+.+|+|++..... ...+.+.+|.-....+.+ | -+ +++
T Consensus 14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i 93 (288)
T PF14531_consen 14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRI 93 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEE
T ss_pred EEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEE
Confidence 445678999999999999996 79999999854432 234556677655555432 1 11 111
Q ss_pred ec---cc---cC-------CcceeeecCCCCchhhhhh---hcCCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeC
Q 003703 516 LG---AC---PE-------AWSLVYEYLPNGSLQDRLF---RKSNV-SPLLWKDRARIAAEIASGLCFLHSSKPEKIVHG 578 (801)
Q Consensus 516 ~g---~~---~~-------~~~LV~E~~~~gsL~~~L~---~~~~~-~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHr 578 (801)
-+ ++ .+ +.+++|+-+ -++|.+.+. ..... ..+....++.+..|++..+++||..+ ++|+
T Consensus 94 ~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~G---lVHg 169 (288)
T PF14531_consen 94 PGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYG---LVHG 169 (288)
T ss_dssp TTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT---EEES
T ss_pred cCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcc---eEec
Confidence 11 00 10 235677766 678877643 22221 23445566778899999999999998 9999
Q ss_pred CCCCCCeeecCCCCeeeecccceeeccCCCCcCCCccccCCCCCCCCCCCcccccc--------CCCCcchhHHhHHHHH
Q 003703 579 DLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT--------GVLTPKSDSYSFGLII 650 (801)
Q Consensus 579 DIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~--------~~~s~ksDVwSlGvvL 650 (801)
||+|+|+|++.+|.++|+||+.....+.... ....+..|.+||.... -.++.+.|.|+||+++
T Consensus 170 di~~~nfll~~~G~v~Lg~F~~~~r~g~~~~---------~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~l 240 (288)
T PF14531_consen 170 DIKPENFLLDQDGGVFLGDFSSLVRAGTRYR---------CSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITL 240 (288)
T ss_dssp T-SGGGEEE-TTS-EEE--GGGEEETTEEEE---------GGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHH
T ss_pred ccceeeEEEcCCCCEEEcChHHHeecCceee---------ccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHH
Confidence 9999999999999999999998766543211 1234577999996633 2578899999999999
Q ss_pred HHHHhCCCCCCChhHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCC
Q 003703 651 LQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRER 709 (801)
Q Consensus 651 ~ELltG~~Pf~~~~~~~~~~~~g~~~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~R 709 (801)
|.|++|..||+...... . . +....... .+++.+..|+..+|+.||.+|
T Consensus 241 y~lWC~~lPf~~~~~~~------~-~---~~~f~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 241 YSLWCGRLPFGLSSPEA------D-P---EWDFSRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HHHHHSS-STCCCGGGS------T-S---GGGGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred HHHHHccCCCCCCCccc------c-c---cccchhcC-CcCHHHHHHHHHHccCCcccC
Confidence 99999999998543210 0 0 00122333 678899999999999999987
No 422
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.71 E-value=1.9e-17 Score=185.35 Aligned_cols=209 Identities=30% Similarity=0.415 Sum_probs=153.8
Q ss_pred HhcCCCCceeeEeccccC--CcceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCC
Q 003703 504 LSKLQHPHLVTLLGACPE--AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLK 581 (801)
Q Consensus 504 l~~l~HpnIV~l~g~~~~--~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIK 581 (801)
|..+.|.|+.+|+|.|.+ ..+.|.+||..|+|.|.+.... ..++|.-...++.+|+.||.|||+.. -..|+.++
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~--~~~d~~F~~s~~rdi~~Gl~ylh~s~--i~~hg~l~ 76 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNED--IKLDYFFILSFIRDISKGLAYLHNSP--IGYHGALK 76 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccc--cCccHHHHHHHHHHHHHHHHHHhcCc--ceeeeeec
Confidence 456899999999999844 4678999999999999997743 56899999999999999999999965 13999999
Q ss_pred CCCeeecCCCCeeeecccceeeccCCCCcCCCccccCCCCCCCCCCCccccccC-------CCCcchhHHhHHHHHHHHH
Q 003703 582 PQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTG-------VLTPKSDSYSFGLIILQLL 654 (801)
Q Consensus 582 p~NILLd~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~-------~~s~ksDVwSlGvvL~ELl 654 (801)
+.|.++|..+.+||+|||+......... ........-...|.|||.+... ..+.+.||||||++++|++
T Consensus 77 s~nClvd~~w~lklt~~Gl~~~~~~~~~----~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~ 152 (484)
T KOG1023|consen 77 SSNCLVDSRWVLKLTDFGLNSLLEETAE----PEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEIL 152 (484)
T ss_pred cccceeeeeEEEEechhhhccccccccc----ccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHH
Confidence 9999999999999999999877643110 0011122234569999988653 1467899999999999999
Q ss_pred hCCCCCCChh------HHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHHh
Q 003703 655 TGRLPVGLAG------EVRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQL 723 (801)
Q Consensus 655 tG~~Pf~~~~------~~~~~~~~g~~~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~l 723 (801)
+.+.||.... ++...+..+ ....+-|...... +....+..++..||..+|.+||++. .+...++.+
T Consensus 153 ~r~~~~~~~~~~~~~~eii~~~~~~-~~~~~rP~i~~~~-e~~~~l~~l~~~cw~e~P~~rPs~~-~i~~~~~~~ 224 (484)
T KOG1023|consen 153 FRSGPFDLRNLVEDPDEIILRVKKG-GSNPFRPSIELLN-ELPPELLLLVARCWEEIPEKRPSIE-QIRSKLLTI 224 (484)
T ss_pred hccCccccccccCChHHHHHHHHhc-CCCCcCcchhhhh-hcchHHHHHHHHhcccChhhCccHH-HHHhhhhhh
Confidence 9999997422 222223231 1111222211111 3444799999999999999999998 565555544
No 423
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.70 E-value=4.9e-18 Score=186.63 Aligned_cols=176 Identities=24% Similarity=0.307 Sum_probs=138.0
Q ss_pred CcceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccce
Q 003703 522 AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGIC 601 (801)
Q Consensus 522 ~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla 601 (801)
.+++.|++|.-.+|.++|.+.......+|...+.|+.|++.|+.| .+ .+|||+||.||++..+..+||.|||+.
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~---~ihrdlkp~nif~~~d~q~kIgDFgl~ 403 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KG---LIHRDLKPSNIFFSDDDQLKIGDFGLV 403 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---cc---chhhhccccccccccchhhhhhhhhhe
Confidence 467999999999999999877777778899999999999999999 44 899999999999999999999999999
Q ss_pred eeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHh-CCCCCCChhHHHHHhhcCccccccC
Q 003703 602 RLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLT-GRLPVGLAGEVRRAVSCGKLSSILD 680 (801)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELlt-G~~Pf~~~~~~~~~~~~g~~~~~~d 680 (801)
..........+.....+..+||..||+||.+.+..|+.|+||||||+||+||++ =..+|.-.. ...-+..|.+...
T Consensus 404 ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~~-t~~d~r~g~ip~~-- 480 (516)
T KOG1033|consen 404 TSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERIA-TLTDIRDGIIPPE-- 480 (516)
T ss_pred eecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHHH-hhhhhhcCCCChH--
Confidence 887766544445556678899999999999999999999999999999999997 333332111 1112222322210
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCc
Q 003703 681 PLAGDWPTFVARRLVDLGLQCCELYGRERPDI 712 (801)
Q Consensus 681 ~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~ 712 (801)
...++| .-..|.++++.+.|.+||+.
T Consensus 481 -~~~d~p-----~e~~ll~~lls~~p~~RP~~ 506 (516)
T KOG1033|consen 481 -FLQDYP-----EEYTLLQQLLSPSPEERPSA 506 (516)
T ss_pred -HhhcCc-----HHHHHHHHhcCCCcccCchH
Confidence 011222 34578899999999999944
No 424
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.70 E-value=1.2e-17 Score=194.78 Aligned_cols=210 Identities=24% Similarity=0.317 Sum_probs=143.9
Q ss_pred hcCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccccCCcceeeecCC
Q 003703 454 TCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACPEAWSLVYEYLP 531 (801)
Q Consensus 454 t~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~LV~E~~~ 531 (801)
..+|..++.|..|+||.||..++. .+.+|+|+ ++...- ..+ +|.....|.+|
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~ki-Nkq~li----lRn---ilt~a~npfvv------------------ 135 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKI-NKQNLI----LRN---ILTFAGNPFVV------------------ 135 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhcc-cccchh----hhc---cccccCCccee------------------
Confidence 367888999999999999999886 67889853 332210 001 22222333333
Q ss_pred CCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCC-c
Q 003703 532 NGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTL-Y 610 (801)
Q Consensus 532 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~-~ 610 (801)
|+-...+... ++++.. ++.+++|||+.+ |+|||+||+|+||+.-|++|+.|||+.+...-... +
T Consensus 136 -gDc~tllk~~---g~lPvd--------mvla~Eylh~yg---ivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atn 200 (1205)
T KOG0606|consen 136 -GDCATLLKNI---GPLPVD--------MVLAVEYLHSYG---IVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATN 200 (1205)
T ss_pred -chhhhhcccC---CCCcch--------hhHHhHhhccCC---eecCCCCCCcceeeecccccccchhhhhhhhhhccch
Confidence 4444444322 234332 378999999988 99999999999999999999999999876421110 0
Q ss_pred C--------CCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChh--HHHHHhhcCccccccC
Q 003703 611 L--------PSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAG--EVRRAVSCGKLSSILD 680 (801)
Q Consensus 611 ~--------~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~--~~~~~~~~g~~~~~~d 680 (801)
. .........+|||.|+|||++...+|+..+|||++|+|+||.+.|+.||.... +....+...
T Consensus 201 l~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd------- 273 (1205)
T KOG0606|consen 201 LKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISD------- 273 (1205)
T ss_pred hhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhh-------
Confidence 0 00112345689999999999999999999999999999999999999996431 111111111
Q ss_pred CCCCCCCH---HHHHHHHHHHHHhhhhCCCCCCCch
Q 003703 681 PLAGDWPT---FVARRLVDLGLQCCELYGRERPDIT 713 (801)
Q Consensus 681 ~~~~~~~~---~~~~~l~~Li~~Cl~~dP~~RPt~~ 713 (801)
...|+. ....+..+++.+.|+.+|.+|--..
T Consensus 274 --~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rlgt~ 307 (1205)
T KOG0606|consen 274 --DIEWPEEDEALPPEAQDLIEQLLRQNPLCRLGTG 307 (1205)
T ss_pred --hccccccCcCCCHHHHHHHHHHHHhChHhhcccc
Confidence 011221 2345788999999999999996433
No 425
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.69 E-value=8.9e-17 Score=164.74 Aligned_cols=132 Identities=24% Similarity=0.392 Sum_probs=110.1
Q ss_pred ceeeecCceEEEEEEECCeEEEEEEeccCCccc--------HHHHHHHHHHHhcCCCCceeeEecc--ccCCcceeeecC
Q 003703 461 FKVGQGGFGCVYKGEMLGRTVAIKMLYSHNMQG--------QLEFQQEVRVLSKLQHPHLVTLLGA--CPEAWSLVYEYL 530 (801)
Q Consensus 461 ~~LG~G~fG~Vy~g~~~g~~vAiK~l~~~~~~~--------~~~f~~E~~il~~l~HpnIV~l~g~--~~~~~~LV~E~~ 530 (801)
+.||+|++|.||+|...|..|++|+........ ...+.+|+.++..+.|+|++....+ ..+..++||||+
T Consensus 2 ~~l~~G~~~~vy~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 81 (211)
T PRK14879 2 KLIKRGAEAEIYLGDFLGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEYI 81 (211)
T ss_pred cccccCceEEEEEEeeCCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEEe
Confidence 469999999999999999999999876543221 2347789999999999987655444 456688999999
Q ss_pred CCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceee
Q 003703 531 PNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRL 603 (801)
Q Consensus 531 ~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~ 603 (801)
+|++|.+.+.... + .+..++.+++.+|.+||..+ ++|+|++|.|||++ ++.++|+|||++..
T Consensus 82 ~G~~L~~~~~~~~------~-~~~~i~~~i~~~l~~lH~~~---i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 82 EGEPLKDLINSNG------M-EELELSREIGRLVGKLHSAG---IIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred CCcCHHHHHHhcc------H-HHHHHHHHHHHHHHHHHhCC---cccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 9999999885422 2 78899999999999999988 99999999999999 78999999998764
No 426
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.69 E-value=1.2e-16 Score=168.84 Aligned_cols=201 Identities=21% Similarity=0.271 Sum_probs=141.1
Q ss_pred CCCceeeEeccccCC-----------------------------cceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHH
Q 003703 508 QHPHLVTLLGACPEA-----------------------------WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAA 558 (801)
Q Consensus 508 ~HpnIV~l~g~~~~~-----------------------------~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~ 558 (801)
+|||||++.++|.+. .||||.-. ..+|..+|..+ ..+.....-|+.
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY-~~tLr~yl~~~----~~s~r~~~~~la 348 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRY-RQTLREYLWTR----HRSYRTGRVILA 348 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcc-hhhHHHHHhcC----CCchHHHHHHHH
Confidence 699999998876221 24666655 45777777544 345567778899
Q ss_pred HHHHHHHHHHhcCCCceeeCCCCCCCeee--cCCCC--eeeecccceeeccCCCCcCCCccccCCCCCCCCCCCcccccc
Q 003703 559 EIASGLCFLHSSKPEKIVHGDLKPQNILL--DSELS--SKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT 634 (801)
Q Consensus 559 qia~aL~yLH~~~~~~iiHrDIKp~NILL--d~~~~--vKL~DFGla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~ 634 (801)
|+++|+.|||.++ |.|||+|++|||| |.++. +.|+|||+|-.-.......+-........|+..-||||++..
T Consensus 349 QlLEav~hL~~hg---vAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta 425 (598)
T KOG4158|consen 349 QLLEAVTHLHKHG---VAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATA 425 (598)
T ss_pred HHHHHHHHHHHcc---chhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhc
Confidence 9999999999998 9999999999998 44443 689999998654332222222222345568889999998865
Q ss_pred CCC------CcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCC
Q 003703 635 GVL------TPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRE 708 (801)
Q Consensus 635 ~~~------s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~g~~~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~ 708 (801)
.+- -.|+|.|+.|.+.||+++...||...+++- +....+.+ ..+...|..++..+.+|+...++.||.+
T Consensus 426 ~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~--L~~r~Yqe---~qLPalp~~vpp~~rqlV~~lL~r~psk 500 (598)
T KOG4158|consen 426 VPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEML--LDTRTYQE---SQLPALPSRVPPVARQLVFDLLKRDPSK 500 (598)
T ss_pred CCCCceeeccchhhhhhhhhhHHHHhccCCcccccchhe--echhhhhh---hhCCCCcccCChHHHHHHHHHhcCCccc
Confidence 432 148999999999999999999996433211 11111111 1123344556667889999999999999
Q ss_pred CCCchHHHHHHHHH
Q 003703 709 RPDITPSLVKELEQ 722 (801)
Q Consensus 709 RPt~~e~l~~~L~~ 722 (801)
||+.. ....+|+-
T Consensus 501 Rvsp~-iAANvl~L 513 (598)
T KOG4158|consen 501 RVSPN-IAANVLNL 513 (598)
T ss_pred cCCcc-HHHhHHHH
Confidence 99987 66666653
No 427
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.69 E-value=1.2e-16 Score=190.30 Aligned_cols=198 Identities=24% Similarity=0.290 Sum_probs=153.5
Q ss_pred HHHHHHhcCccccceeeecCceEEEEEEEC-CeEEEEEEeccCCcccHHHHHHHHHHHhcCC---CCceeeEecc--ccC
Q 003703 448 ADLQTATCNFSESFKVGQGGFGCVYKGEML-GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQ---HPHLVTLLGA--CPE 521 (801)
Q Consensus 448 ~el~~at~~f~~~~~LG~G~fG~Vy~g~~~-g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~---HpnIV~l~g~--~~~ 521 (801)
.+++.....|.+...||+|+||.||+|... |+.||||+-++...= +|.-=..++.+|+ -+-|..++.+ |.+
T Consensus 691 ~~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~W---EfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~ 767 (974)
T KOG1166|consen 691 TEFEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPW---EFYICLQVMERLKPQMLPSIMHISSAHVFQN 767 (974)
T ss_pred ceeeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCce---eeeehHHHHHhhchhhhcchHHHHHHHccCC
Confidence 345556678888999999999999999775 999999997654321 1211223444555 1223333322 366
Q ss_pred CcceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecC-------CCCee
Q 003703 522 AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDS-------ELSSK 594 (801)
Q Consensus 522 ~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~-------~~~vK 594 (801)
..+||++|.+.|+|.+++. +...++|..+..|+.|++..+..||..+ |||+||||+|+||.. +..++
T Consensus 768 ~S~lv~ey~~~Gtlld~~N---~~~~m~e~lv~~~~~qml~ive~lH~~~---IIHgDiKPDNfll~~~~~~~~~~~~l~ 841 (974)
T KOG1166|consen 768 ASVLVSEYSPYGTLLDLIN---TNKVMDEYLVMFFSCQMLRIVEHLHAMG---IIHGDIKPDNFLLRREICADSDSKGLY 841 (974)
T ss_pred cceeeeeccccccHHHhhc---cCCCCCchhhhHHHHHHHHHHHHHHhcc---eecccCCcceeEeecccCCCCcccceE
Confidence 7889999999999999997 3356899999999999999999999998 999999999999943 34589
Q ss_pred eecccceeeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCC
Q 003703 595 ICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRL 658 (801)
Q Consensus 595 L~DFGla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~ 658 (801)
|+|||.+-.+.--. ....-....+|-++-++|...+..++...|.|.|.-+++-||.|+.
T Consensus 842 lIDfG~siDm~lfp----~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 842 LIDFGRSIDMKLFP----DGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred EEecccceeeeEcC----CCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 99999986553211 1123456678999999999999999999999999999999999974
No 428
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.68 E-value=1.3e-16 Score=161.99 Aligned_cols=128 Identities=25% Similarity=0.418 Sum_probs=105.3
Q ss_pred eeeecCceEEEEEEECCeEEEEEEeccCCcc--------cHHHHHHHHHHHhcCCCCce--eeEeccccCCcceeeecCC
Q 003703 462 KVGQGGFGCVYKGEMLGRTVAIKMLYSHNMQ--------GQLEFQQEVRVLSKLQHPHL--VTLLGACPEAWSLVYEYLP 531 (801)
Q Consensus 462 ~LG~G~fG~Vy~g~~~g~~vAiK~l~~~~~~--------~~~~f~~E~~il~~l~HpnI--V~l~g~~~~~~~LV~E~~~ 531 (801)
.||+|+||.||+|.+.|..|++|........ ....+.+|+.++..++|+++ +.+++...+..++||||++
T Consensus 1 ~ig~G~~~~vy~~~~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~ 80 (199)
T TIGR03724 1 LIAKGAEAIIYLGDFLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYIE 80 (199)
T ss_pred CCCCCceEEEEEeecCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEC
Confidence 3899999999999999999999997543221 12457789999999988754 4455555666789999999
Q ss_pred CCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceee
Q 003703 532 NGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRL 603 (801)
Q Consensus 532 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~ 603 (801)
|++|.+.+.... ..++.+++.+|.+||+.+ ++|+|++|.||+++ ++.++++|||+++.
T Consensus 81 g~~l~~~~~~~~----------~~~~~~i~~~l~~lH~~g---i~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 81 GKPLKDVIEEGN----------DELLREIGRLVGKLHKAG---IVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred CccHHHHHhhcH----------HHHHHHHHHHHHHHHHCC---eecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 999998874321 078999999999999988 99999999999999 88999999998765
No 429
>smart00090 RIO RIO-like kinase.
Probab=99.67 E-value=1.6e-16 Score=166.03 Aligned_cols=143 Identities=19% Similarity=0.196 Sum_probs=110.4
Q ss_pred cCccccceeeecCceEEEEEE-E--CCeEEEEEEeccCCcc------------------------cHHHHHHHHHHHhcC
Q 003703 455 CNFSESFKVGQGGFGCVYKGE-M--LGRTVAIKMLYSHNMQ------------------------GQLEFQQEVRVLSKL 507 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~-~--~g~~vAiK~l~~~~~~------------------------~~~~f~~E~~il~~l 507 (801)
..|.....||+|+||.||+|. . .|..||||++...... ....+..|+.++.++
T Consensus 28 ~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L 107 (237)
T smart00090 28 ILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRL 107 (237)
T ss_pred chHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 347778899999999999998 3 4899999998754210 012356899999999
Q ss_pred CCC--ceeeEeccccCCcceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCe
Q 003703 508 QHP--HLVTLLGACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNI 585 (801)
Q Consensus 508 ~Hp--nIV~l~g~~~~~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NI 585 (801)
.+. .+.+++++ ...+|||||++|++|...+... ..+.......++.+++.+|.+||..+ .|+||||||+||
T Consensus 108 ~~~~i~~p~~~~~--~~~~lV~E~~~g~~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~LH~~g--~iiH~Dikp~NI 180 (237)
T smart00090 108 YEAGVPVPKPIAW--RRNVLVMEFIGGDGLPAPRLKD---VEPEEEEEFELYDDILEEMRKLYKEG--ELVHGDLSEYNI 180 (237)
T ss_pred HhcCCCCCeeeEe--cCceEEEEEecCCccccccccc---CCcchHHHHHHHHHHHHHHHHHHhcC--CEEeCCCChhhE
Confidence 753 34455543 2458999999998887654322 23445567889999999999999976 399999999999
Q ss_pred eecCCCCeeeecccceeecc
Q 003703 586 LLDSELSSKICDFGICRLVT 605 (801)
Q Consensus 586 LLd~~~~vKL~DFGla~~~~ 605 (801)
+++ ++.++|+|||++....
T Consensus 181 li~-~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 181 LVH-DGKVVIIDVSQSVELD 199 (237)
T ss_pred EEE-CCCEEEEEChhhhccC
Confidence 999 8899999999987543
No 430
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.66 E-value=4.5e-16 Score=158.29 Aligned_cols=140 Identities=23% Similarity=0.211 Sum_probs=109.0
Q ss_pred HHhcCccccceeeecCceEEEEEEEC-CeEEEEEEeccCCcc----------------------cHHHHHHHHHHHhcCC
Q 003703 452 TATCNFSESFKVGQGGFGCVYKGEML-GRTVAIKMLYSHNMQ----------------------GQLEFQQEVRVLSKLQ 508 (801)
Q Consensus 452 ~at~~f~~~~~LG~G~fG~Vy~g~~~-g~~vAiK~l~~~~~~----------------------~~~~f~~E~~il~~l~ 508 (801)
.....|...+.||.|+||.||++... |+.||||++...... ....+..|..++..+.
T Consensus 12 ~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 91 (198)
T cd05144 12 KRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALY 91 (198)
T ss_pred HcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHH
Confidence 33334666788999999999999884 899999987643210 0113567899999998
Q ss_pred CC--ceeeEeccccCCcceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCee
Q 003703 509 HP--HLVTLLGACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNIL 586 (801)
Q Consensus 509 Hp--nIV~l~g~~~~~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NIL 586 (801)
|+ +++..++. ...++||||++|++|...... .....++.+++.++.++|..+ |+||||||+||+
T Consensus 92 ~~~i~v~~~~~~--~~~~lv~e~~~g~~L~~~~~~---------~~~~~~~~~i~~~l~~lh~~g---i~H~Dl~p~Nil 157 (198)
T cd05144 92 EEGFPVPKPIDW--NRHAVVMEYIDGVELYRVRVL---------EDPEEVLDEILEEIVKAYKHG---IIHGDLSEFNIL 157 (198)
T ss_pred HcCCCCCceeec--CCceEEEEEeCCcchhhcccc---------ccHHHHHHHHHHHHHHHHHCC---CCcCCCCcccEE
Confidence 77 45555553 345899999999998765421 234678899999999999977 999999999999
Q ss_pred ecCCCCeeeecccceeecc
Q 003703 587 LDSELSSKICDFGICRLVT 605 (801)
Q Consensus 587 Ld~~~~vKL~DFGla~~~~ 605 (801)
++.++.++|+|||++....
T Consensus 158 l~~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 158 VDDDEKIYIIDWPQMVSTD 176 (198)
T ss_pred EcCCCcEEEEECCccccCC
Confidence 9999999999999986554
No 431
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.66 E-value=3.2e-16 Score=183.32 Aligned_cols=139 Identities=25% Similarity=0.348 Sum_probs=112.4
Q ss_pred HHHhcCccccceeeecCceEEEEEEECCeEEEEEEeccCCc--------ccHHHHHHHHHHHhcCCCCceeeEeccc--c
Q 003703 451 QTATCNFSESFKVGQGGFGCVYKGEMLGRTVAIKMLYSHNM--------QGQLEFQQEVRVLSKLQHPHLVTLLGAC--P 520 (801)
Q Consensus 451 ~~at~~f~~~~~LG~G~fG~Vy~g~~~g~~vAiK~l~~~~~--------~~~~~f~~E~~il~~l~HpnIV~l~g~~--~ 520 (801)
......|...+.||+|+||.||+|.+.+..+++|+...... .....+.+|+.++..++|+|++..+.++ .
T Consensus 329 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~ 408 (535)
T PRK09605 329 EEVKRRKIPDHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDP 408 (535)
T ss_pred cccccccCccceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeC
Confidence 33445566788999999999999999877777765432211 1124588999999999999988765554 4
Q ss_pred CCcceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccc
Q 003703 521 EAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGI 600 (801)
Q Consensus 521 ~~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGl 600 (801)
...++||||++|++|.+++. ....++.+++.+|.|||+.+ |+||||||+|||+ .++.++|+|||+
T Consensus 409 ~~~~lv~E~~~g~~L~~~l~-----------~~~~~~~~i~~~L~~lH~~g---iiHrDlkp~NILl-~~~~~~liDFGl 473 (535)
T PRK09605 409 EEKTIVMEYIGGKDLKDVLE-----------GNPELVRKVGEIVAKLHKAG---IVHGDLTTSNFIV-RDDRLYLIDFGL 473 (535)
T ss_pred CCCEEEEEecCCCcHHHHHH-----------HHHHHHHHHHHHHHHHHhCC---CccCCCChHHEEE-ECCcEEEEeCcc
Confidence 46789999999999998874 35678999999999999988 9999999999999 577999999999
Q ss_pred eeec
Q 003703 601 CRLV 604 (801)
Q Consensus 601 a~~~ 604 (801)
++..
T Consensus 474 a~~~ 477 (535)
T PRK09605 474 GKYS 477 (535)
T ss_pred cccC
Confidence 8753
No 432
>PRK15456 universal stress protein UspG; Provisional
Probab=99.58 E-value=1.6e-14 Score=138.86 Aligned_cols=132 Identities=11% Similarity=0.110 Sum_probs=101.1
Q ss_pred cEEEEEecCCc-ccchhhHHHHhhhcC-CCceEEEEc-CCCCC----c-HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCe
Q 003703 23 EKVYVALGKCV-EKGLSLLHWTLQRFG-SSREILGKL-PASQA----S-AEVLSAFRAEERQKMKKLLDNYLRICVEAEV 94 (801)
Q Consensus 23 ~~V~VaVd~~~-~~~~~Al~Wal~n~~-~~~~~~~~v-~~~~~----~-~~~~~~~~~~~~~~~~~ll~~~~~~C~~~~v 94 (801)
++|+||||+|. +.+..||.||+.-.. ...+.++|| +.... . ......+.+..++..++.|+++.......++
T Consensus 3 ~~ILv~vD~S~~~~s~~al~~A~~la~~~~~l~llhv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 82 (142)
T PRK15456 3 KTIIMPVDVFEMELSDKAVRHAEFLAQDDGVIHLLHVLPGSASLSLHRFAADVRRFEEHLQHEAEERLQTMVSHFTIDPS 82 (142)
T ss_pred ccEEEeccCCchhHHHHHHHHHHHHHhcCCeEEEEEEecCcccccccccccchhhHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 58999999974 456669999996433 457888998 22110 0 1122345555667777788888877766678
Q ss_pred eeEEEEEecCCHHHHHHHHHHHhCCCEEEeccCCCCccchhcCCChhhHHHhhCCCCceEEEEe
Q 003703 95 KARIITTEADKIQKAIVQLMNIHGIQKLVMGAFPDNCMKVKMGSRKASYAAKNAPMFCEIWFVN 158 (801)
Q Consensus 95 ~~~~~~~e~~d~~~~I~~~i~~~~i~~LV~G~~~~~~~~r~~~~~vs~~v~~~a~~~C~V~vv~ 158 (801)
++++.+. .|++++.|+++++++++|.||||+||.+ +.+.+.||++.+|+++++ |+|+||+
T Consensus 83 ~v~~~v~-~G~~~~~I~~~a~~~~~DLIVmG~~g~~-~~~~llGS~a~~v~~~a~--~pVLvV~ 142 (142)
T PRK15456 83 RIKQHVR-FGSVRDEVNELAEELGADVVVIGSRNPS-ISTHLLGSNASSVIRHAN--LPVLVVR 142 (142)
T ss_pred ceEEEEc-CCChHHHHHHHHhhcCCCEEEEcCCCCC-ccceecCccHHHHHHcCC--CCEEEeC
Confidence 8887765 4689999999999999999999999987 777777889999999998 9999984
No 433
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.57 E-value=1.2e-14 Score=138.86 Aligned_cols=132 Identities=23% Similarity=0.230 Sum_probs=111.6
Q ss_pred cceeeecCceEEEEEEECCeEEEEEEeccCCcccHHHHHHHHHHHhcCCC--CceeeEeccccC--CcceeeecCCCCch
Q 003703 460 SFKVGQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQH--PHLVTLLGACPE--AWSLVYEYLPNGSL 535 (801)
Q Consensus 460 ~~~LG~G~fG~Vy~g~~~g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~H--pnIV~l~g~~~~--~~~LV~E~~~~gsL 535 (801)
.+.||.|+++.||++...+..+++|....... ...+.+|+.++..++| ++++++++++.. ..+++|||++++.+
T Consensus 3 ~~~i~~g~~~~v~~~~~~~~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~ 80 (155)
T cd05120 3 IKLLKGGLTNRVYLLGTKDEDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETL 80 (155)
T ss_pred ceecccccccceEEEEecCCeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCeec
Confidence 45799999999999999888999999865443 4568899999999976 588888887754 58899999998877
Q ss_pred hhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceee
Q 003703 536 QDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRL 603 (801)
Q Consensus 536 ~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~ 603 (801)
... ++.....++.+++.+|.+||.....+++|+|++|.||+++..+.++++|||++..
T Consensus 81 ~~~----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 81 DEV----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred ccC----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 653 4466778899999999999997545699999999999999989999999998764
No 434
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.57 E-value=6.4e-15 Score=147.99 Aligned_cols=135 Identities=24% Similarity=0.258 Sum_probs=96.9
Q ss_pred cceeeecCceEEEEEEEC-CeEEEEEEeccCCcccH--HH----------------------HHHHHHHHhcCCCC--ce
Q 003703 460 SFKVGQGGFGCVYKGEML-GRTVAIKMLYSHNMQGQ--LE----------------------FQQEVRVLSKLQHP--HL 512 (801)
Q Consensus 460 ~~~LG~G~fG~Vy~g~~~-g~~vAiK~l~~~~~~~~--~~----------------------f~~E~~il~~l~Hp--nI 512 (801)
.+.||+|+||.||+|.+. |..||||++........ .. ...|...+..+.+. .+
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 357999999999999887 89999999875432111 11 13455556555433 24
Q ss_pred eeEeccccCCcceeeecCCCCchhhh-hhhcCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCceeeCCCCCCCeeecCC
Q 003703 513 VTLLGACPEAWSLVYEYLPNGSLQDR-LFRKSNVSPLLWKDRARIAAEIASGLCFLHS-SKPEKIVHGDLKPQNILLDSE 590 (801)
Q Consensus 513 V~l~g~~~~~~~LV~E~~~~gsL~~~-L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~-~~~~~iiHrDIKp~NILLd~~ 590 (801)
.+.+++ ...++||||++++.+... +.... .. .....++.+++.++.++|. .+ |+|+||||+||+++ +
T Consensus 82 ~~~~~~--~~~~lv~e~~~g~~~~~~~l~~~~----~~-~~~~~~~~~~~~~l~~lh~~~~---ivH~Dl~p~Nili~-~ 150 (187)
T cd05119 82 PKPIDL--NRHVLVMEFIGGDGIPAPRLKDVR----LL-EDPEELYDQILELMRKLYREAG---LVHGDLSEYNILVD-D 150 (187)
T ss_pred CceEec--CCCEEEEEEeCCCCccChhhhhhh----hc-ccHHHHHHHHHHHHHHHhhccC---cCcCCCChhhEEEE-C
Confidence 444443 246899999999654322 21111 01 5577899999999999999 76 99999999999999 8
Q ss_pred CCeeeecccceeecc
Q 003703 591 LSSKICDFGICRLVT 605 (801)
Q Consensus 591 ~~vKL~DFGla~~~~ 605 (801)
+.++|+|||.+....
T Consensus 151 ~~~~liDfg~a~~~~ 165 (187)
T cd05119 151 GKVYIIDVPQAVEID 165 (187)
T ss_pred CcEEEEECccccccc
Confidence 999999999987554
No 435
>cd01987 USP_OKCHK USP domain is located between the N-terminal sensor domain and C-terminal catalytic domain of this Osmosensitive K+ channel histidine kinase family. The family of KdpD sensor kinase proteins regulates the kdpFABC operon responsible for potassium transport. The USP domain is homologous to the universal stress protein Usp Usp is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. Usp enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity.
Probab=99.54 E-value=5.4e-14 Score=131.60 Aligned_cols=121 Identities=13% Similarity=0.179 Sum_probs=97.3
Q ss_pred EEEEEecCCcccchhhHHHHhhhcC--CCceEEEEcCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCeeeEEEEE
Q 003703 24 KVYVALGKCVEKGLSLLHWTLQRFG--SSREILGKLPASQASAEVLSAFRAEERQKMKKLLDNYLRICVEAEVKARIITT 101 (801)
Q Consensus 24 ~V~VaVd~~~~~~~~Al~Wal~n~~--~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~C~~~~v~~~~~~~ 101 (801)
+|+||||++ ..++.||.||..... +..+.++||-..... ...+..++.++.+...+.+.++.+ .++
T Consensus 1 ~Ilv~vd~s-~~s~~al~~a~~la~~~~~~l~ll~v~~~~~~---------~~~~~~~~~l~~~~~~~~~~~~~~--~~~ 68 (124)
T cd01987 1 RILVCISGG-PNAERLIRRAARLADRLKAPWYVVYVETPRLN---------RLSEAERRRLAEALRLAEELGAEV--VTL 68 (124)
T ss_pred CEEEEECCC-cchHHHHHHHHHHHHHhCCCEEEEEEecCccc---------cCCHHHHHHHHHHHHHHHHcCCEE--EEE
Confidence 589999996 556669999997654 778999999322111 012344567888888888777754 345
Q ss_pred ecCCHHHHHHHHHHHhCCCEEEeccCCCCccchhcCCChhhHHHhhCCCCceEEEE
Q 003703 102 EADKIQKAIVQLMNIHGIQKLVMGAFPDNCMKVKMGSRKASYAAKNAPMFCEIWFV 157 (801)
Q Consensus 102 e~~d~~~~I~~~i~~~~i~~LV~G~~~~~~~~r~~~~~vs~~v~~~a~~~C~V~vv 157 (801)
.+++++++|+++++++++|.||||+++.+.++|.+.||++++|++++ +.|+||||
T Consensus 69 ~~~~~~~~I~~~~~~~~~dllviG~~~~~~~~~~~~Gs~~~~v~~~a-~~~~v~v~ 123 (124)
T cd01987 69 PGDDVAEAIVEFAREHNVTQIVVGKSRRSRWRELFRGSLVDRLLRRA-GNIDVHIV 123 (124)
T ss_pred eCCcHHHHHHHHHHHcCCCEEEeCCCCCchHHHHhcccHHHHHHHhC-CCCeEEEe
Confidence 67899999999999999999999999999999998888999999999 45999997
No 436
>PRK15005 universal stress protein F; Provisional
Probab=99.53 E-value=7.3e-14 Score=134.24 Aligned_cols=131 Identities=8% Similarity=0.127 Sum_probs=97.8
Q ss_pred cEEEEEecCCccc-chhhHHHHhhhcC--CCceEEEEc-CC-CCCc------HHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 003703 23 EKVYVALGKCVEK-GLSLLHWTLQRFG--SSREILGKL-PA-SQAS------AEVLSAFRAEERQKMKKLLDNYLRICVE 91 (801)
Q Consensus 23 ~~V~VaVd~~~~~-~~~Al~Wal~n~~--~~~~~~~~v-~~-~~~~------~~~~~~~~~~~~~~~~~ll~~~~~~C~~ 91 (801)
++|+||||+|..+ +..||.||++-.. +.+++++|| +. .... ..... .....++.+++.|..+...+..
T Consensus 3 ~~ILv~~D~s~~~~~~~a~~~a~~la~~~~~~l~ll~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~ 81 (144)
T PRK15005 3 RTILVPIDISDSELTQRVISHVEAEAKIDDAEVHFLTVIPSLPYYASLGLAYSAELP-AMDDLKAEAKSQLEEIIKKFKL 81 (144)
T ss_pred ccEEEecCCCchhHHHHHHHHHHHHHhccCCeEEEEEEEccCcccccccccccccch-HHHHHHHHHHHHHHHHHHHhCC
Confidence 5799999997664 4569999998653 778999998 21 1100 00000 1123345556677777777766
Q ss_pred cCeeeEEEEEecCCHHHHHHHHHHHhCCCEEEeccCCCCccchhcCCChhhHHHhhCCCCceEEEEe
Q 003703 92 AEVKARIITTEADKIQKAIVQLMNIHGIQKLVMGAFPDNCMKVKMGSRKASYAAKNAPMFCEIWFVN 158 (801)
Q Consensus 92 ~~v~~~~~~~e~~d~~~~I~~~i~~~~i~~LV~G~~~~~~~~r~~~~~vs~~v~~~a~~~C~V~vv~ 158 (801)
.++++++.+. .|++++.|+++++++++|.||||+++ +.+.+.+.||++.+|++++| |+|+||.
T Consensus 82 ~~~~~~~~v~-~G~p~~~I~~~a~~~~~DLIV~Gs~~-~~~~~~llGS~a~~vl~~a~--cpVlvVr 144 (144)
T PRK15005 82 PTDRVHVHVE-EGSPKDRILELAKKIPADMIIIASHR-PDITTYLLGSNAAAVVRHAE--CSVLVVR 144 (144)
T ss_pred CCCceEEEEe-CCCHHHHHHHHHHHcCCCEEEEeCCC-CCchheeecchHHHHHHhCC--CCEEEeC
Confidence 7788887765 47899999999999999999999995 56778777889999999999 9999984
No 437
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.52 E-value=7.2e-14 Score=146.29 Aligned_cols=133 Identities=22% Similarity=0.226 Sum_probs=104.2
Q ss_pred cceee-ecCceEEEEEEECCeEEEEEEeccCCc-------------ccHHHHHHHHHHHhcCCCCce--eeEeccccC--
Q 003703 460 SFKVG-QGGFGCVYKGEMLGRTVAIKMLYSHNM-------------QGQLEFQQEVRVLSKLQHPHL--VTLLGACPE-- 521 (801)
Q Consensus 460 ~~~LG-~G~fG~Vy~g~~~g~~vAiK~l~~~~~-------------~~~~~f~~E~~il~~l~HpnI--V~l~g~~~~-- 521 (801)
...|| .||.|+||.....+..++||.+..... .....+.+|+.++.+|+|++| +..++++..
T Consensus 36 ~~~lg~~~g~gtv~~v~~~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~ 115 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTPGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRH 115 (239)
T ss_pred CceeecCCCCccEEEEEeCCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeec
Confidence 35688 899999999999999999998853211 122457889999999998875 666665421
Q ss_pred ----CcceeeecCCC-CchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeee
Q 003703 522 ----AWSLVYEYLPN-GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKIC 596 (801)
Q Consensus 522 ----~~~LV~E~~~~-gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~ 596 (801)
..++||||++| .+|.+++... +++.. .+.+|+.+|.+||..+ |+||||||.|||++.++.++|+
T Consensus 116 ~~~~~~~lV~e~l~G~~~L~~~l~~~----~l~~~----~~~~i~~~l~~lH~~G---I~HrDlkp~NILv~~~~~v~LI 184 (239)
T PRK01723 116 GLFYRADILIERIEGARDLVALLQEA----PLSEE----QWQAIGQLIARFHDAG---VYHADLNAHNILLDPDGKFWLI 184 (239)
T ss_pred CcceeeeEEEEecCCCCCHHHHHhcC----CCCHH----HHHHHHHHHHHHHHCC---CCCCCCCchhEEEcCCCCEEEE
Confidence 12499999997 6888887432 34432 3568999999999988 9999999999999999999999
Q ss_pred cccceee
Q 003703 597 DFGICRL 603 (801)
Q Consensus 597 DFGla~~ 603 (801)
|||.+..
T Consensus 185 Dfg~~~~ 191 (239)
T PRK01723 185 DFDRGEL 191 (239)
T ss_pred ECCCccc
Confidence 9998764
No 438
>PRK15118 universal stress global response regulator UspA; Provisional
Probab=99.49 E-value=1.5e-13 Score=132.25 Aligned_cols=127 Identities=9% Similarity=0.112 Sum_probs=90.0
Q ss_pred cEEEEEecCCcccchhhHHHHhhhcC--CCceEEEEcCCCC-C-cHH----HHHHHHHHHHHHHHHHHHHHHHHhhhcCe
Q 003703 23 EKVYVALGKCVEKGLSLLHWTLQRFG--SSREILGKLPASQ-A-SAE----VLSAFRAEERQKMKKLLDNYLRICVEAEV 94 (801)
Q Consensus 23 ~~V~VaVd~~~~~~~~Al~Wal~n~~--~~~~~~~~v~~~~-~-~~~----~~~~~~~~~~~~~~~ll~~~~~~C~~~~v 94 (801)
++|+||||+|..+. .||.||++... +..++++||.... . ... ....+.+...+...+.+ ..++...++
T Consensus 4 ~~ILvavD~S~~s~-~al~~a~~la~~~~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~~~ 79 (144)
T PRK15118 4 KHILIAVDLSPESK-VLVEKAVSMARPYNAKVSLIHVDVNYSDLYTGLIDVNLGDMQKRISEETHHAL---TELSTNAGY 79 (144)
T ss_pred eEEEEEccCChhHH-HHHHHHHHHHHhhCCEEEEEEEccChhhhhhhhhhcchHHHHHHHHHHHHHHH---HHHHHhCCC
Confidence 58999999976655 59999998754 7789999992211 1 000 11122222222333333 344566788
Q ss_pred eeEEEEEecCCHHHHHHHHHHHhCCCEEEeccCCCCccchhcCCChhhHHHhhCCCCceEEEEe
Q 003703 95 KARIITTEADKIQKAIVQLMNIHGIQKLVMGAFPDNCMKVKMGSRKASYAAKNAPMFCEIWFVN 158 (801)
Q Consensus 95 ~~~~~~~e~~d~~~~I~~~i~~~~i~~LV~G~~~~~~~~r~~~~~vs~~v~~~a~~~C~V~vv~ 158 (801)
.+...++..|+++++|+++++++++|.||||+|+ +.+++ ++ |++.+|+++|+ |+|+||.
T Consensus 80 ~~~~~~~~~G~p~~~I~~~a~~~~~DLIV~Gs~~-~~~~~-lg-Sva~~v~~~a~--~pVLvv~ 138 (144)
T PRK15118 80 PITETLSGSGDLGQVLVDAIKKYDMDLVVCGHHQ-DFWSK-LM-SSARQLINTVH--VDMLIVP 138 (144)
T ss_pred CceEEEEEecCHHHHHHHHHHHhCCCEEEEeCcc-cHHHH-HH-HHHHHHHhhCC--CCEEEec
Confidence 8766666678999999999999999999999996 44443 54 79999999999 9999996
No 439
>cd01988 Na_H_Antiporter_C The C-terminal domain of a subfamily of Na+ /H+ antiporter existed in bacteria and archea . Na+/H+ exchange proteins eject protons from cells, effectively eliminating excess acid from actively metabolising cells. Na+ /H+ exchange activity is also crucial for the regulation of cell volume, and for the reabsorption of NaCl across renal, intestinal, and other epithelia. These antiports exchange Na+ for H+ in an electroneutral manner, and this activity is carried out by a family of Na+ /H+ exchangers, or NHEs, which are known to be present in both prokaryotic and eukaryotic cells. These exchangers are highly-regulated (glyco)phosphoproteins, which, based on their primary structure, appear to contain 10-12 membrane-spanning regions (M) at the N-terminus and a large cytoplasmic region at the C-terminus. The transmembrane regions M3-M12 share identity wit h other members of the family. The M6 and M7 regions are highly conserved. Thus, this is thought to be the regio
Probab=99.47 E-value=5e-13 Score=125.97 Aligned_cols=128 Identities=16% Similarity=0.203 Sum_probs=104.8
Q ss_pred EEEEEecCCcccchhhHHHHhhhcC--CCceEEEEc--CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCeeeEEE
Q 003703 24 KVYVALGKCVEKGLSLLHWTLQRFG--SSREILGKL--PASQASAEVLSAFRAEERQKMKKLLDNYLRICVEAEVKARII 99 (801)
Q Consensus 24 ~V~VaVd~~~~~~~~Al~Wal~n~~--~~~~~~~~v--~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~C~~~~v~~~~~ 99 (801)
+|+||||++ +.+..||.||..-.. +..++++|+ +....... ......+..+++++.+...+.+.|++++.+
T Consensus 1 ~ILv~vd~s-~~~~~~l~~a~~la~~~~~~v~ll~v~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 75 (132)
T cd01988 1 RILVPVANP-NTARDLLELAAALARAQNGEIIPLNVIEVPNHSSPS----QLEVNVQRARKLLRQAERIAASLGVPVHTI 75 (132)
T ss_pred CEEEecCCc-hhHHHHHHHHHHHhhcCCCeEEEEEEEecCCCCCcc----hhHHHHHHHHHHHHHHHHHhhhcCCceEEE
Confidence 589999996 556669999998654 678999999 22222111 122334667889999999999999999988
Q ss_pred EEecCCHHHHHHHHHHHhCCCEEEeccCCCCccchhcCCChhhHHHhhCCCCceEEEEe
Q 003703 100 TTEADKIQKAIVQLMNIHGIQKLVMGAFPDNCMKVKMGSRKASYAAKNAPMFCEIWFVN 158 (801)
Q Consensus 100 ~~e~~d~~~~I~~~i~~~~i~~LV~G~~~~~~~~r~~~~~vs~~v~~~a~~~C~V~vv~ 158 (801)
+..++++.++|++++.++++|.||||+++.+.+.+.+.|+++++|.++++ |+|+||+
T Consensus 76 ~~~~~~~~~~I~~~a~~~~~dlIV~G~~~~~~~~~~~lGs~~~~v~~~~~--~pvlvv~ 132 (132)
T cd01988 76 IRIDHDIASGILRTAKERQADLIIMGWHGSTSLRDRLFGGVIDQVLESAP--CDVAVVK 132 (132)
T ss_pred EEecCCHHHHHHHHHHhcCCCEEEEecCCCCCccceecCchHHHHHhcCC--CCEEEeC
Confidence 87778999999999999999999999999999988877889999999998 9999984
No 440
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.46 E-value=9.3e-15 Score=171.06 Aligned_cols=245 Identities=24% Similarity=0.346 Sum_probs=178.3
Q ss_pred CccccceeeecCceEEEEEEEC---CeEEEEEEeccCC--cccHHHHHHHHHHHhcCC-CCceeeEecccc--CCcceee
Q 003703 456 NFSESFKVGQGGFGCVYKGEML---GRTVAIKMLYSHN--MQGQLEFQQEVRVLSKLQ-HPHLVTLLGACP--EAWSLVY 527 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~---g~~vAiK~l~~~~--~~~~~~f~~E~~il~~l~-HpnIV~l~g~~~--~~~~LV~ 527 (801)
.|.....||+|+|+.|-..... ...+|.|.+.... .........|..+-..+. |+|++.+++... +..+++.
T Consensus 21 ~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~ 100 (601)
T KOG0590|consen 21 QYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSL 100 (601)
T ss_pred cccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccccc
Confidence 4555667999999999877653 4557777665443 112223445776766776 999999998873 4578899
Q ss_pred ecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHH-hcCCCceeeCCCCCCCeeecCCC-Ceeeecccceeecc
Q 003703 528 EYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLH-SSKPEKIVHGDLKPQNILLDSEL-SSKICDFGICRLVT 605 (801)
Q Consensus 528 E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH-~~~~~~iiHrDIKp~NILLd~~~-~vKL~DFGla~~~~ 605 (801)
+|..+|++.+.+.... ....+....-.++.|+..++.|+| ..+ +.||||||+|.+++..+ ..+++|||+|..+.
T Consensus 101 ~~s~g~~~f~~i~~~~-~~~~~~~~~~~~~~ql~s~l~~~H~~~~---~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~ 176 (601)
T KOG0590|consen 101 SYSDGGSLFSKISHPD-STGTSSSSASRYLPQLNSGLSYLHPENG---VTHRDIKPSNSLLDESGSALKIADFGLATAYR 176 (601)
T ss_pred CcccccccccccccCC-ccCCCCcchhhhhhhhccCccccCcccc---cccCCCCCccchhccCCCcccCCCchhhcccc
Confidence 9999999988873221 113344567788999999999999 766 99999999999999999 99999999999876
Q ss_pred C-CCCcCCCccccCCCCC-CCCCCCccccccC-CCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhhcCccccccCCC
Q 003703 606 E-DTLYLPSFHRSTAPKG-SFPYADPEYHRTG-VLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPL 682 (801)
Q Consensus 606 ~-~~~~~~~~~~~~~~~G-t~~Y~APE~~~~~-~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~g~~~~~~d~~ 682 (801)
. .... ......+| ++.|+|||.+.+. ...+..|+||.|+++.-+++|..||....... +.........
T Consensus 177 ~~~g~~----~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~-----~~~~~~~~~~ 247 (601)
T KOG0590|consen 177 NKNGAE----RSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKD-----GRYSSWKSNK 247 (601)
T ss_pred ccCCcc----eeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccc-----ccceeecccc
Confidence 6 3321 23345667 9999999998874 55789999999999999999999997433211 1212222211
Q ss_pred ----CCCCCHHHHHHHHHHHHHhhhhCCCCCCCchH
Q 003703 683 ----AGDWPTFVARRLVDLGLQCCELYGRERPDITP 714 (801)
Q Consensus 683 ----~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e 714 (801)
...| ........++..+++..+|..|.+..+
T Consensus 248 ~~~~~~~~-~~~~~~~~~~l~k~l~~~~~~r~s~~~ 282 (601)
T KOG0590|consen 248 GRFTQLPW-NSISDQAHDLLHKILKENPSNRLSIEE 282 (601)
T ss_pred cccccCcc-ccCChhhhhcccccccCCchhcccccc
Confidence 1112 224556778888899999999999873
No 441
>PF00582 Usp: Universal stress protein family; InterPro: IPR006016 The universal stress protein UspA P28242 from SWISSPROT [] is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. UspA enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae UspA [] reveals an alpha/beta fold similar to that of the Methanocaldococcus jannaschii (Methanococcus jannaschii) MJ0577 protein, which binds ATP [], though UspA lacks ATP-binding activity.; GO: 0006950 response to stress; PDB: 3DLO_C 3QTB_A 2PFS_A 3TNJ_A 1JMV_D 3FH0_B 3FDX_B 3AB7_A 3AB8_A 2GM3_F ....
Probab=99.46 E-value=5.5e-13 Score=125.57 Aligned_cols=133 Identities=16% Similarity=0.188 Sum_probs=95.9
Q ss_pred cEEEEEecCCcccchhhHHHHhhhcC--CCceEEEEc-CCCCCc--HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCeeeE
Q 003703 23 EKVYVALGKCVEKGLSLLHWTLQRFG--SSREILGKL-PASQAS--AEVLSAFRAEERQKMKKLLDNYLRICVEAEVKAR 97 (801)
Q Consensus 23 ~~V~VaVd~~~~~~~~Al~Wal~n~~--~~~~~~~~v-~~~~~~--~~~~~~~~~~~~~~~~~ll~~~~~~C~~~~v~~~ 97 (801)
++|+||||++.. +..|++||+.... +.+++++|| +..... .........................+...+....
T Consensus 3 ~~Ilv~~d~~~~-~~~al~~a~~la~~~~~~i~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (140)
T PF00582_consen 3 KRILVAIDGSEE-SRRALRFALELAKRSGAEITLLHVIPPPPQYSFSAAEDEESEEEAEEEEQARQAEAEEAEAEGGIVI 81 (140)
T ss_dssp SEEEEEESSSHH-HHHHHHHHHHHHHHHTCEEEEEEEEESCHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSEE
T ss_pred CEEEEEECCCHH-HHHHHHHHHHHHHhhCCeEEEEEeeccccccccccccccccccccchhhhhhhHHHHHHhhhcccee
Confidence 689999999655 4469999999765 788999999 222111 1111111111111111111111155666666777
Q ss_pred EEEEecCCHHHHHHHHHHHhCCCEEEeccCCCCccchhcCCChhhHHHhhCCCCceEEEEe
Q 003703 98 IITTEADKIQKAIVQLMNIHGIQKLVMGAFPDNCMKVKMGSRKASYAAKNAPMFCEIWFVN 158 (801)
Q Consensus 98 ~~~~e~~d~~~~I~~~i~~~~i~~LV~G~~~~~~~~r~~~~~vs~~v~~~a~~~C~V~vv~ 158 (801)
...+..++++++|++++.++++|.||||+++.+.+.+.+.|+++.+|++++| |+|+||.
T Consensus 82 ~~~~~~~~~~~~i~~~~~~~~~dliv~G~~~~~~~~~~~~gs~~~~l~~~~~--~pVlvv~ 140 (140)
T PF00582_consen 82 EVVIESGDVADAIIEFAEEHNADLIVMGSRGRSGLERLLFGSVAEKLLRHAP--CPVLVVP 140 (140)
T ss_dssp EEEEEESSHHHHHHHHHHHTTCSEEEEESSSTTSTTTSSSHHHHHHHHHHTS--SEEEEEE
T ss_pred EEEEEeeccchhhhhccccccceeEEEeccCCCCccCCCcCCHHHHHHHcCC--CCEEEeC
Confidence 7777889999999999999999999999999999999988889999999999 9999984
No 442
>PRK09982 universal stress protein UspD; Provisional
Probab=99.45 E-value=5.5e-13 Score=128.26 Aligned_cols=127 Identities=13% Similarity=0.117 Sum_probs=94.7
Q ss_pred cEEEEEecCCcccchhhHHHHhhhcC--CCceEEEEcC-C-CCCcHH----HHHHHHHHHHHHHHHHHHHHHHHhhhcCe
Q 003703 23 EKVYVALGKCVEKGLSLLHWTLQRFG--SSREILGKLP-A-SQASAE----VLSAFRAEERQKMKKLLDNYLRICVEAEV 94 (801)
Q Consensus 23 ~~V~VaVd~~~~~~~~Al~Wal~n~~--~~~~~~~~v~-~-~~~~~~----~~~~~~~~~~~~~~~ll~~~~~~C~~~~v 94 (801)
++|+||||+|..+. .||.||++-.. +.+++++||- . +..... ......+..++.+++.|.++...+.. .
T Consensus 4 k~ILvavD~S~~s~-~al~~A~~lA~~~~a~l~llhV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~ 80 (142)
T PRK09982 4 KHIGVAISGNEEDA-LLVNKALELARHNDAHLTLIHIDDGLSELYPGIYFPATEDILQLLKNKSDNKLYKLTKNIQW--P 80 (142)
T ss_pred eEEEEEecCCcchH-HHHHHHHHHHHHhCCeEEEEEEccCcchhchhhhccchHHHHHHHHHHHHHHHHHHHHhcCC--C
Confidence 58999999966554 59999998653 7789999992 1 111111 11234445556667777777765532 3
Q ss_pred eeEEEEEecCCHHHHHHHHHHHhCCCEEEeccCCCCccchhcCCChhhHHHhhCCCCceEEEEe
Q 003703 95 KARIITTEADKIQKAIVQLMNIHGIQKLVMGAFPDNCMKVKMGSRKASYAAKNAPMFCEIWFVN 158 (801)
Q Consensus 95 ~~~~~~~e~~d~~~~I~~~i~~~~i~~LV~G~~~~~~~~r~~~~~vs~~v~~~a~~~C~V~vv~ 158 (801)
.++..+ ..|+|++.|++++++.++|.||||++ ++.++|.+ | |++.|+++++ |+|+||.
T Consensus 81 ~~~~~v-~~G~p~~~I~~~A~~~~aDLIVmG~~-~~~~~~~~-~-va~~V~~~s~--~pVLvv~ 138 (142)
T PRK09982 81 KTKLRI-ERGEMPETLLEIMQKEQCDLLVCGHH-HSFINRLM-P-AYRGMINKMS--ADLLIVP 138 (142)
T ss_pred cceEEE-EecCHHHHHHHHHHHcCCCEEEEeCC-hhHHHHHH-H-HHHHHHhcCC--CCEEEec
Confidence 455444 55899999999999999999999986 78888888 5 9999999998 9999995
No 443
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.38 E-value=1.2e-12 Score=148.86 Aligned_cols=137 Identities=23% Similarity=0.290 Sum_probs=98.4
Q ss_pred ceeeecCceEEEEEEEC-CeEEEEEEeccCCccc----------------------------------------HHHHHH
Q 003703 461 FKVGQGGFGCVYKGEML-GRTVAIKMLYSHNMQG----------------------------------------QLEFQQ 499 (801)
Q Consensus 461 ~~LG~G~fG~Vy~g~~~-g~~vAiK~l~~~~~~~----------------------------------------~~~f~~ 499 (801)
..||.|++|.||+|++. |+.||||+.++..... ...|.+
T Consensus 123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~ 202 (437)
T TIGR01982 123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR 202 (437)
T ss_pred cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence 57999999999999985 9999999986642110 012455
Q ss_pred HHHHHhcCC-----CCce--eeEeccccCCcceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHH-HHHHHHhcC
Q 003703 500 EVRVLSKLQ-----HPHL--VTLLGACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIAS-GLCFLHSSK 571 (801)
Q Consensus 500 E~~il~~l~-----HpnI--V~l~g~~~~~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~-aL~yLH~~~ 571 (801)
|...+.+++ ++++ .++|..+....+|||||++|++|.+.+..... .+ .+..++..++. .+..+|..+
T Consensus 203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~--~~---~~~~ia~~~~~~~l~ql~~~g 277 (437)
T TIGR01982 203 EAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA--GL---DRKALAENLARSFLNQVLRDG 277 (437)
T ss_pred HHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhc--CC---CHHHHHHHHHHHHHHHHHhCC
Confidence 666665552 3332 23333334467899999999999887643211 12 23456666655 467888877
Q ss_pred CCceeeCCCCCCCeeecCCCCeeeecccceeecc
Q 003703 572 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVT 605 (801)
Q Consensus 572 ~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~ 605 (801)
++|+|++|.||+++.++.++|+|||++..+.
T Consensus 278 ---~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 278 ---FFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred ---ceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 9999999999999999999999999998764
No 444
>PRK10116 universal stress protein UspC; Provisional
Probab=99.34 E-value=1.4e-11 Score=118.16 Aligned_cols=128 Identities=14% Similarity=0.188 Sum_probs=96.4
Q ss_pred cEEEEEecCCcccchhhHHHHhhhcC--CCceEEEEcC-CCC----CcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCee
Q 003703 23 EKVYVALGKCVEKGLSLLHWTLQRFG--SSREILGKLP-ASQ----ASAEVLSAFRAEERQKMKKLLDNYLRICVEAEVK 95 (801)
Q Consensus 23 ~~V~VaVd~~~~~~~~Al~Wal~n~~--~~~~~~~~v~-~~~----~~~~~~~~~~~~~~~~~~~ll~~~~~~C~~~~v~ 95 (801)
++|+||||.+..+. .||.+|+.-.. +..++++|+. ... ......+.+.+..++..++.|..+ +.+.++.
T Consensus 4 ~~ILv~~D~s~~s~-~al~~A~~lA~~~~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~ 79 (142)
T PRK10116 4 SNILVAVAVTPESQ-QLLAKAVSIARPVNGKISLITLASDPEMYNQFAAPMLEDLRSVMQEETQSFLDKL---IQDADYP 79 (142)
T ss_pred ceEEEEccCCcchH-HHHHHHHHHHHHhCCEEEEEEEccCcccchhhhHHHHHHHHHHHHHHHHHHHHHH---HHhcCCC
Confidence 58999999976655 59999988543 6688888882 211 112223344444444555555544 4566777
Q ss_pred eEEEEEecCCHHHHHHHHHHHhCCCEEEeccCCCCccchhcCCChhhHHHhhCCCCceEEEEe
Q 003703 96 ARIITTEADKIQKAIVQLMNIHGIQKLVMGAFPDNCMKVKMGSRKASYAAKNAPMFCEIWFVN 158 (801)
Q Consensus 96 ~~~~~~e~~d~~~~I~~~i~~~~i~~LV~G~~~~~~~~r~~~~~vs~~v~~~a~~~C~V~vv~ 158 (801)
.+.+++..+++.++|++++++.++|.||||+++.+.+.+.+ +++++|+++++ |+|+||.
T Consensus 80 ~~~~~~~~G~~~~~I~~~a~~~~~DLiV~g~~~~~~~~~~~--s~a~~v~~~~~--~pVLvv~ 138 (142)
T PRK10116 80 IEKTFIAYGELSEHILEVCRKHHFDLVICGNHNHSFFSRAS--CSAKRVIASSE--VDVLLVP 138 (142)
T ss_pred eEEEEEecCCHHHHHHHHHHHhCCCEEEEcCCcchHHHHHH--HHHHHHHhcCC--CCEEEEe
Confidence 76666778999999999999999999999999999988875 58999999999 9999995
No 445
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.33 E-value=3.9e-12 Score=125.44 Aligned_cols=130 Identities=20% Similarity=0.151 Sum_probs=100.0
Q ss_pred ceeeecCceEEEEEEECCeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCce-eeEeccccCCcceeeecCCCCchhhhh
Q 003703 461 FKVGQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHL-VTLLGACPEAWSLVYEYLPNGSLQDRL 539 (801)
Q Consensus 461 ~~LG~G~fG~Vy~g~~~g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnI-V~l~g~~~~~~~LV~E~~~~gsL~~~L 539 (801)
..|+.|.++.||+++..|..|++|....... ....+..|+.++..+.+.++ .++++++....++||||++|.++....
T Consensus 4 ~~l~~G~~~~vy~~~~~~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~~~~~~lv~e~i~G~~l~~~~ 82 (170)
T cd05151 4 SPLKGGMTNKNYRVEVANKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFDPETGVLITEFIEGSELLTED 82 (170)
T ss_pred eecCCcccCceEEEEECCeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEeCCCCeEEEEecCCCcccccc
Confidence 4689999999999999999999999755432 22346789999998865554 456666655678999999998886530
Q ss_pred hhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcC--CCceeeCCCCCCCeeecCCCCeeeecccceee
Q 003703 540 FRKSNVSPLLWKDRARIAAEIASGLCFLHSSK--PEKIVHGDLKPQNILLDSELSSKICDFGICRL 603 (801)
Q Consensus 540 ~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~--~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~ 603 (801)
.....++.+++.+|..||..+ +..++|+|++|.||+++ ++.++++|||.+..
T Consensus 83 -----------~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 83 -----------FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred -----------ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 011245678999999999987 23479999999999999 66899999998653
No 446
>PRK11175 universal stress protein UspE; Provisional
Probab=99.28 E-value=3.5e-11 Score=130.80 Aligned_cols=135 Identities=12% Similarity=0.082 Sum_probs=106.0
Q ss_pred cEEEEEecCCcccchhhHHHHhhhc--CCCceEEEEc-CC-CC-----CcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 003703 23 EKVYVALGKCVEKGLSLLHWTLQRF--GSSREILGKL-PA-SQ-----ASAEVLSAFRAEERQKMKKLLDNYLRICVEAE 93 (801)
Q Consensus 23 ~~V~VaVd~~~~~~~~Al~Wal~n~--~~~~~~~~~v-~~-~~-----~~~~~~~~~~~~~~~~~~~ll~~~~~~C~~~~ 93 (801)
++|+||+|+|..+.. ||.||+.-. .+..++++|+ +. .. ...+......+...+..++.|+.+...+...+
T Consensus 4 ~~ILv~~D~s~~~~~-al~~a~~lA~~~~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 82 (305)
T PRK11175 4 QNILVVIDPNQDDQP-ALRRAVYLAQRNGGKITAFLPIYDFSYEMTTLLSPDEREAMRQGVISQRTAWIREQAKPYLDAG 82 (305)
T ss_pred ceEEEEcCCCccccH-HHHHHHHHHHhcCCCEEEEEeccCchhhhhcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 479999999776665 999999854 3667888876 21 11 11222222333334456677888888888889
Q ss_pred eeeEEEEEecCCHHHHHHHHHHHhCCCEEEeccCCCCccchhcCCChhhHHHhhCCCCceEEEEeCC
Q 003703 94 VKARIITTEADKIQKAIVQLMNIHGIQKLVMGAFPDNCMKVKMGSRKASYAAKNAPMFCEIWFVNKG 160 (801)
Q Consensus 94 v~~~~~~~e~~d~~~~I~~~i~~~~i~~LV~G~~~~~~~~r~~~~~vs~~v~~~a~~~C~V~vv~kg 160 (801)
+++++.++..+++.++|++++.++++|.||||++|.+.+.+.+.|+++..+++++| |+|+||..+
T Consensus 83 ~~~~~~v~~~g~~~~~i~~~a~~~~~DLiV~G~~~~~~~~~~~~gs~~~~l~~~~~--~pvlvv~~~ 147 (305)
T PRK11175 83 IPIEIKVVWHNRPFEAIIQEVIAGGHDLVVKMTHQHDKLESVIFTPTDWHLLRKCP--CPVLMVKDQ 147 (305)
T ss_pred CceEEEEecCCCcHHHHHHHHHhcCCCEEEEeCCCCcHHHhhccChhHHHHHhcCC--CCEEEeccc
Confidence 99998777678999999999999999999999999999999988889999999998 999999754
No 447
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.26 E-value=3.3e-12 Score=132.81 Aligned_cols=206 Identities=23% Similarity=0.265 Sum_probs=138.7
Q ss_pred HHHhcCCCCceeeEeccccCC-------cceeeecCCCCchhhhhhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCC
Q 003703 502 RVLSKLQHPHLVTLLGACPEA-------WSLVYEYLPNGSLQDRLFRKS-NVSPLLWKDRARIAAEIASGLCFLHSSKPE 573 (801)
Q Consensus 502 ~il~~l~HpnIV~l~g~~~~~-------~~LV~E~~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~aL~yLH~~~~~ 573 (801)
.-|-++-|-|||+++.|+.+. ..++.|||..|+|..+|.+.. +...+....-.+|+.||..||.|||+.. +
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~-P 197 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCD-P 197 (458)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccC-C
Confidence 345566799999999888442 458999999999999997642 3345666667789999999999999988 4
Q ss_pred ceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHH
Q 003703 574 KIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQL 653 (801)
Q Consensus 574 ~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~EL 653 (801)
||+|+++..+-|++..+|-+|+.----. ... ...............|.++|.+||+=.....+..+|||+||...+||
T Consensus 198 piihgnlTc~tifiq~ngLIkig~~ap~-s~h-~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlem 275 (458)
T KOG1266|consen 198 PIIHGNLTCDTIFIQHNGLIKIGSVAPD-STH-PSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEM 275 (458)
T ss_pred ccccCCcchhheeecCCceEEecccCcc-ccc-hhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHH
Confidence 7999999999999999998887532111 110 00000011122334578899999988777888899999999999999
Q ss_pred HhCCCC-CCChhHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHH
Q 003703 654 LTGRLP-VGLAGEVRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKEL 720 (801)
Q Consensus 654 ltG~~P-f~~~~~~~~~~~~g~~~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L 720 (801)
..|..- -.....+.. ...+...+-.... ..-..++..|++..|..||+++.++.+.|
T Consensus 276 ailEiq~tnseS~~~~---ee~ia~~i~~len-------~lqr~~i~kcl~~eP~~rp~ar~llfHpl 333 (458)
T KOG1266|consen 276 AILEIQSTNSESKVEV---EENIANVIIGLEN-------GLQRGSITKCLEGEPNGRPDARLLLFHPL 333 (458)
T ss_pred HHheeccCCCcceeeh---hhhhhhheeeccC-------ccccCcCcccccCCCCCCcchhhhhcCce
Confidence 887643 211111100 0011111000000 01134567899999999999997665443
No 448
>cd00293 USP_Like Usp: Universal stress protein family. The universal stress protein Usp is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. Usp enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae Usp reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, athough Usp lacks ATP-binding activity.
Probab=99.24 E-value=7e-11 Score=109.92 Aligned_cols=127 Identities=20% Similarity=0.279 Sum_probs=102.9
Q ss_pred EEEEEecCCcccchhhHHHHhhhcC--CCceEEEEcCCC-CCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCeeeEEEE
Q 003703 24 KVYVALGKCVEKGLSLLHWTLQRFG--SSREILGKLPAS-QASAEVLSAFRAEERQKMKKLLDNYLRICVEAEVKARIIT 100 (801)
Q Consensus 24 ~V~VaVd~~~~~~~~Al~Wal~n~~--~~~~~~~~v~~~-~~~~~~~~~~~~~~~~~~~~ll~~~~~~C~~~~v~~~~~~ 100 (801)
+|+||+|++.. +..++.||++... +.++.++|+-.. ..... .+.+....+.++.|+.|...|...++.+...+
T Consensus 1 ~ilv~i~~~~~-~~~~l~~a~~~a~~~~~~i~~l~v~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 76 (130)
T cd00293 1 RILVAVDGSEE-SERALRWAARLARRLGAELVLLHVVDPPPSSAA---ELAELLEEEARALLEALREALAEAGVKVETVV 76 (130)
T ss_pred CEEEEeCCCHH-HHHHHHHHHHHHHhcCCEEEEEEEecCCCCcch---hHHHHHHHHHHHHHHHHHHHHhcCCCceEEEE
Confidence 58999999655 5559999999875 778999998322 11111 33445557778999999999988899998776
Q ss_pred EecCCHHHHHHHHHHHhCCCEEEeccCCCCccchhcCCChhhHHHhhCCCCceEEEE
Q 003703 101 TEADKIQKAIVQLMNIHGIQKLVMGAFPDNCMKVKMGSRKASYAAKNAPMFCEIWFV 157 (801)
Q Consensus 101 ~e~~d~~~~I~~~i~~~~i~~LV~G~~~~~~~~r~~~~~vs~~v~~~a~~~C~V~vv 157 (801)
.. ++++++|++++.++++|.||||+++.+.+.+.+.++++.+++++++ |+|++|
T Consensus 77 ~~-~~~~~~i~~~~~~~~~dlvvig~~~~~~~~~~~~~~~~~~ll~~~~--~pvliv 130 (130)
T cd00293 77 LE-GDPAEAILEAAEELGADLIVMGSRGRSGLRRLLLGSVAERVLRHAP--CPVLVV 130 (130)
T ss_pred ec-CCCHHHHHHHHHHcCCCEEEEcCCCCCccceeeeccHHHHHHhCCC--CCEEeC
Confidence 55 5669999999999999999999999999988877889999999987 999985
No 449
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.24 E-value=6.1e-12 Score=141.48 Aligned_cols=243 Identities=25% Similarity=0.248 Sum_probs=170.4
Q ss_pred Cccccceeee--cCceEEEEEEE----CCeEEEEEEec--cCCcccHHHHHHHHHHHhcC-CCCceeeEeccccCC--cc
Q 003703 456 NFSESFKVGQ--GGFGCVYKGEM----LGRTVAIKMLY--SHNMQGQLEFQQEVRVLSKL-QHPHLVTLLGACPEA--WS 524 (801)
Q Consensus 456 ~f~~~~~LG~--G~fG~Vy~g~~----~g~~vAiK~l~--~~~~~~~~~f~~E~~il~~l-~HpnIV~l~g~~~~~--~~ 524 (801)
.|.....+|. |.+|.||.+.. .+..+|+|.-+ .........=.+|+....++ .|+|.|+.+..+.+. .+
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lf 194 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILF 194 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcce
Confidence 4556677999 99999999877 37889999833 22223333334566666666 499999988877543 45
Q ss_pred eeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHH----HHHHHHhcCCCceeeCCCCCCCeeecCC-CCeeeeccc
Q 003703 525 LVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIAS----GLCFLHSSKPEKIVHGDLKPQNILLDSE-LSSKICDFG 599 (801)
Q Consensus 525 LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~----aL~yLH~~~~~~iiHrDIKp~NILLd~~-~~vKL~DFG 599 (801)
+-.|++ +.+|..+.+.... .++....+.++.+... ||.++|+.+ ++|-|+||.||++..+ ...+++|||
T Consensus 195 iqtE~~-~~sl~~~~~~~~~--~~p~~~l~~~~~~~~~~~~~al~~~hs~~---~~~~~~kp~~i~~~~~~~s~~~~df~ 268 (524)
T KOG0601|consen 195 IQTELC-GESLQSYCHTPCN--FLPDNLLWNSLRDWLSRDVTALSHLHSNN---IVHDDLKPANIFTTSDWTSCKLTDFG 268 (524)
T ss_pred eeeccc-cchhHHhhhcccc--cCCchhhhhHHhhhhhcccccccccCCCc---ccccccchhheecccccceeecCCcc
Confidence 556666 6777776654432 2444566666667777 999999988 9999999999999999 889999999
Q ss_pred ceeeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCCh-hHHHHHhhcCccccc
Q 003703 600 ICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLA-GEVRRAVSCGKLSSI 678 (801)
Q Consensus 600 la~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~-~~~~~~~~~g~~~~~ 678 (801)
+...+....... .........|..-|++||... +-++...|+|+||.++++-.+|..+.... ...|..+..+.+.
T Consensus 269 ~v~~i~~~~~~~-~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip-- 344 (524)
T KOG0601|consen 269 LVSKISDGNFSS-VFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIP-- 344 (524)
T ss_pred eeEEccCCcccc-ceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCc--
Confidence 999887655322 222334457888999999864 56889999999999999999987665321 1222222222111
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCch
Q 003703 679 LDPLAGDWPTFVARRLVDLGLQCCELYGRERPDIT 713 (801)
Q Consensus 679 ~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~ 713 (801)
.++....+..+..++..+++.+|..|++..
T Consensus 345 -----~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q 374 (524)
T KOG0601|consen 345 -----LEFCEGGSSSLRSVTSQMLDEDPRLRLTAQ 374 (524)
T ss_pred -----hhhhcCcchhhhhHHHHhcCcchhhhhHHH
Confidence 112222334555688999999999999886
No 450
>PF04564 U-box: U-box domain; InterPro: IPR003613 Quality control of intracellular proteins is essential for cellular homeostasis. Molecular chaperones recognise and contribute to the refolding of misfolded or unfolded proteins, whereas the ubiquitin-proteasome system mediates the degradation of such abnormal proteins. Ubiquitin-protein ligases (E3s) determine the substrate specificity for ubiquitylation and have been classified into HECT and RING-finger families. More recently, however, U-box proteins, which contain a domain (the U box) of about 70 amino acids that is conserved from yeast to humans, have been identified as a new type of E3 []. Members of the U-box family of proteins constitute a class of ubiquitin-protein ligases (E3s) distinct from the HECT-type and RING finger-containing E3 families []. Using yeast two-hybrid technology, all mammalian U-box proteins have been reported to interact with molecular chaperones or co-chaperones, including Hsp90, Hsp70, DnaJc7, EKN1, CRN, and VCP. This suggests that the function of U box-type E3s is to mediate the degradation of unfolded or misfolded proteins in conjunction with molecular chaperones as receptors that recognise such abnormal proteins [, ]. Unlike the RING finger domain, IPR001841 from INTERPRO, that is stabilised by Zn2+ ions coordinated by the cysteines and a histidine, the U-box scaffold is probably stabilised by a system of salt-bridges and hydrogen bonds. The charged and polar residues that participate in this network of bonds are more strongly conserved in the U-box proteins than in classic RING fingers, which supports their role in maintaining the stability of the U box. Thus, the U box appears to have evolved from a RING finger domain by appropriation of a new set of residues required to stabilise its structure, concomitant with the loss of the original, metal-chelating residues [].; GO: 0004842 ubiquitin-protein ligase activity, 0016567 protein ubiquitination, 0000151 ubiquitin ligase complex; PDB: 1T1H_A 2C2L_D 2C2V_V 1WGM_A 2KR4_A 3L1Z_B 3L1X_A 2KRE_A 3M63_A 2QIZ_A ....
Probab=99.22 E-value=4.6e-12 Score=106.95 Aligned_cols=71 Identities=45% Similarity=0.839 Sum_probs=62.5
Q ss_pred CCCcccchhhhhhhcCCCcCCCCccccccchhhhhccCCCCCCccccccCCCCCCCchHHHHHHHHHHhhC
Q 003703 731 VPSFFLCPILQEIMHDPQVAADGFTYEGKAIRDWLENGRETSPMTNLRLSHLHLTPNHALRHAIQDWLCKS 801 (801)
Q Consensus 731 ~p~~~l~pilqeim~dP~~~~dg~ty~~~~i~~~l~~g~~~sp~t~~~l~~~~l~Pn~~lr~~~~~~~~~~ 801 (801)
+|..|.|||..++|.||.+.++|.+|+..+|..|+..++.++|+|+..++..+|+||.+||++|++|+.++
T Consensus 1 iP~~f~CpIt~~lM~dPVi~~~G~tyer~~I~~~l~~~~~~~P~t~~~l~~~~l~pn~~Lk~~I~~~~~~~ 71 (73)
T PF04564_consen 1 IPDEFLCPITGELMRDPVILPSGHTYERSAIERWLEQNGGTDPFTRQPLSESDLIPNRALKSAIEEWCAEN 71 (73)
T ss_dssp SSGGGB-TTTSSB-SSEEEETTSEEEEHHHHHHHHCTTSSB-TTT-SB-SGGGSEE-HHHHHHHHHHHHHC
T ss_pred CCcccCCcCcCcHhhCceeCCcCCEEcHHHHHHHHHcCCCCCCCCCCcCCcccceECHHHHHHHHHHHHHc
Confidence 48889999999999999999999999999999999999999999999999999999999999999999875
No 451
>PRK11175 universal stress protein UspE; Provisional
Probab=99.17 E-value=2.3e-10 Score=124.38 Aligned_cols=132 Identities=11% Similarity=0.090 Sum_probs=94.1
Q ss_pred ccEEEEEecCCcccc------hhhHHHHhhhc--C-CCceEEEEcCC--CC-C----cHHHHHHHHHHHHHHHHHHHHHH
Q 003703 22 GEKVYVALGKCVEKG------LSLLHWTLQRF--G-SSREILGKLPA--SQ-A----SAEVLSAFRAEERQKMKKLLDNY 85 (801)
Q Consensus 22 ~~~V~VaVd~~~~~~------~~Al~Wal~n~--~-~~~~~~~~v~~--~~-~----~~~~~~~~~~~~~~~~~~ll~~~ 85 (801)
.++|+||+|.+..++ ..||.+|++-. . +..+.++||-. .. . .......+.+..++...+.+.++
T Consensus 152 ~~~Ilva~D~s~~~~~~~~~~~~al~~a~~la~~~~~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 231 (305)
T PRK11175 152 GGKILVAVNVASEEPYHDALNEKLVEEAIDLAEQLNHAEVHLVNAYPVTPINIAIELPEFDPSVYNDAIRGQHLLAMKAL 231 (305)
T ss_pred CCeEEEEeCCCCCccchhHHHHHHHHHHHHHHhhCcCCceEEEEEecCcchhccccccccchhhHHHHHHHHHHHHHHHH
Confidence 468999999976543 35899998632 2 66889999821 10 0 00011222222223333344444
Q ss_pred HHHhhhcCeeeEEEEEecCCHHHHHHHHHHHhCCCEEEeccCCCCccchhcCCChhhHHHhhCCCCceEEEEe
Q 003703 86 LRICVEAEVKARIITTEADKIQKAIVQLMNIHGIQKLVMGAFPDNCMKVKMGSRKASYAAKNAPMFCEIWFVN 158 (801)
Q Consensus 86 ~~~C~~~~v~~~~~~~e~~d~~~~I~~~i~~~~i~~LV~G~~~~~~~~r~~~~~vs~~v~~~a~~~C~V~vv~ 158 (801)
+...++.++..++..|+++++|+++++++++|.||||++|++.+.+.+.|+++.+|++++| |+|+||+
T Consensus 232 ---~~~~~~~~~~~~v~~G~~~~~I~~~a~~~~~DLIVmG~~~~~~~~~~llGS~a~~v~~~~~--~pVLvv~ 299 (305)
T PRK11175 232 ---RQKFGIDEEQTHVEEGLPEEVIPDLAEHLDAELVILGTVGRTGLSAAFLGNTAEHVIDHLN--CDLLAIK 299 (305)
T ss_pred ---HHHhCCChhheeeccCCHHHHHHHHHHHhCCCEEEECCCccCCCcceeecchHHHHHhcCC--CCEEEEc
Confidence 3445776655555668999999999999999999999999999999988889999999999 9999995
No 452
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.15 E-value=1.1e-10 Score=134.48 Aligned_cols=142 Identities=17% Similarity=0.224 Sum_probs=92.1
Q ss_pred cCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCccc----------------------------------H----
Q 003703 455 CNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQG----------------------------------Q---- 494 (801)
Q Consensus 455 ~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~~----------------------------------~---- 494 (801)
..|.. ..||.|++|.||+|++. |+.||||++++..... .
T Consensus 120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~ 198 (537)
T PRK04750 120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH 198 (537)
T ss_pred HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence 34665 68999999999999984 8999999997642100 0
Q ss_pred --HHHHHHHHHHhcCC----CCcee---eEeccccCCcceeeecCCCCchhhhh--hhcCC-CCCCCHHHHHHHHHHHHH
Q 003703 495 --LEFQQEVRVLSKLQ----HPHLV---TLLGACPEAWSLVYEYLPNGSLQDRL--FRKSN-VSPLLWKDRARIAAEIAS 562 (801)
Q Consensus 495 --~~f~~E~~il~~l~----HpnIV---~l~g~~~~~~~LV~E~~~~gsL~~~L--~~~~~-~~~l~~~~~~~i~~qia~ 562 (801)
.+|.+|...+.+++ +.+.+ ++|.-+....+|||||++|+.+.+.- ...+. ...+.......++.|+
T Consensus 199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi-- 276 (537)
T PRK04750 199 DELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV-- 276 (537)
T ss_pred HhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH--
Confidence 12445555555552 33333 33332334578999999999998742 22110 0012112222223333
Q ss_pred HHHHHHhcCCCceeeCCCCCCCeeecCCC----CeeeecccceeeccCC
Q 003703 563 GLCFLHSSKPEKIVHGDLKPQNILLDSEL----SSKICDFGICRLVTED 607 (801)
Q Consensus 563 aL~yLH~~~~~~iiHrDIKp~NILLd~~~----~vKL~DFGla~~~~~~ 607 (801)
...| ++|+|+||.||+++.++ .++++|||++..++..
T Consensus 277 -----f~~G---ffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~~ 317 (537)
T PRK04750 277 -----FRDG---FFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNKE 317 (537)
T ss_pred -----HhCC---eeeCCCChHHeEEecCCCCCCeEEEEecceEEECCHH
Confidence 3444 99999999999999888 9999999999887543
No 453
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.15 E-value=2.4e-11 Score=142.97 Aligned_cols=249 Identities=21% Similarity=0.178 Sum_probs=170.7
Q ss_pred HhcCccccceeeecCceEEEEEEEC--CeEEEEEEeccCCcc---cHHHHHHHHHHHhcCCCCceeeEecc--ccCCcce
Q 003703 453 ATCNFSESFKVGQGGFGCVYKGEML--GRTVAIKMLYSHNMQ---GQLEFQQEVRVLSKLQHPHLVTLLGA--CPEAWSL 525 (801)
Q Consensus 453 at~~f~~~~~LG~G~fG~Vy~g~~~--g~~vAiK~l~~~~~~---~~~~f~~E~~il~~l~HpnIV~l~g~--~~~~~~L 525 (801)
.-+.|...+.+-+|.++.++.+.-. |...++|+.....+- .......+-.++-..+||-++..... |....+|
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L 881 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPL 881 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcch
Confidence 3355666667889999999987554 445555554333221 11122233333334456777766655 4567899
Q ss_pred eeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeecc
Q 003703 526 VYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVT 605 (801)
Q Consensus 526 V~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~ 605 (801)
+++|+.+++|...|+... ..+.......+..+..+++|||... ++|||++|.|+|...+|+.+++|||......
T Consensus 882 ~~~~~~~~~~~Skl~~~~---~~saepaRs~i~~~vqs~e~L~s~~---r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg 955 (1205)
T KOG0606|consen 882 VGHYLNGGDLPSKLHNSG---CLSAEPARSPILERVQSLESLHSSL---RKHRDLKPDSLLIAYDGHRPLTDFGTLSKVG 955 (1205)
T ss_pred hhHHhccCCchhhhhcCC---CcccccccchhHHHHhhhhccccch---hhcccccccchhhcccCCcccCccccccccc
Confidence 999999999999887654 2333334455667889999999976 8999999999999999999999998543321
Q ss_pred CC---CCc-----------------CCC-----ccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCC
Q 003703 606 ED---TLY-----------------LPS-----FHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPV 660 (801)
Q Consensus 606 ~~---~~~-----------------~~~-----~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf 660 (801)
-- ... .+. ........||+.|.+||...+...+..+|+|++|++++|.++|.+||
T Consensus 956 ~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~ 1035 (1205)
T KOG0606|consen 956 LIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPF 1035 (1205)
T ss_pred cccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCC
Confidence 10 000 000 02234568999999999999999999999999999999999999999
Q ss_pred CChhH--HHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCch
Q 003703 661 GLAGE--VRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDIT 713 (801)
Q Consensus 661 ~~~~~--~~~~~~~g~~~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~ 713 (801)
..... +.+.+-.+. .....-+...+.....++...+..+|.+|-.+.
T Consensus 1036 na~tpq~~f~ni~~~~------~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1036 NAETPQQIFENILNRD------IPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred CCcchhhhhhccccCC------CCCCCCccccChhhhhhhhhhhccCchhccCcc
Confidence 74332 222111111 112233445666788889999999999998775
No 454
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.05 E-value=1.7e-09 Score=109.11 Aligned_cols=135 Identities=16% Similarity=0.118 Sum_probs=97.9
Q ss_pred ceeeecCceEEEEEEEC--------CeEEEEEEeccCCc----------------------ccHHHHH----HHHHHHhc
Q 003703 461 FKVGQGGFGCVYKGEML--------GRTVAIKMLYSHNM----------------------QGQLEFQ----QEVRVLSK 506 (801)
Q Consensus 461 ~~LG~G~fG~Vy~g~~~--------g~~vAiK~l~~~~~----------------------~~~~~f~----~E~~il~~ 506 (801)
..||.|--+.||.|... +..+|||+.+.... .....+. +|...|.+
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 36899999999999754 37899998743211 0011233 89999999
Q ss_pred CC--CCceeeEeccccCCcceeeecCCCCchhh-hhhhcCCCCCCCHHHHHHHHHHHHHHHHHH-HhcCCCceeeCCCCC
Q 003703 507 LQ--HPHLVTLLGACPEAWSLVYEYLPNGSLQD-RLFRKSNVSPLLWKDRARIAAEIASGLCFL-HSSKPEKIVHGDLKP 582 (801)
Q Consensus 507 l~--HpnIV~l~g~~~~~~~LV~E~~~~gsL~~-~L~~~~~~~~l~~~~~~~i~~qia~aL~yL-H~~~~~~iiHrDIKp 582 (801)
+. .-++..++++ ...+|||||+.++.+.. .|.. ..++......+..+++.+|..| |..+ |||+||++
T Consensus 83 l~~~Gv~vP~pi~~--~~~~lvME~Ig~~~~~~~~Lkd----~~~~~~~~~~i~~~i~~~l~~l~H~~g---lVHGDLs~ 153 (197)
T cd05146 83 MQKAGIPCPEVVVL--KKHVLVMSFIGDDQVPAPKLKD----AKLNDEEMKNAYYQVLSMMKQLYKECN---LVHADLSE 153 (197)
T ss_pred HHHcCCCCCeEEEe--cCCEEEEEEcCCCCccchhhhc----cccCHHHHHHHHHHHHHHHHHHHHhCC---eecCCCCH
Confidence 84 3566677754 56789999997654422 2211 1233455667889999999999 7877 99999999
Q ss_pred CCeeecCCCCeeeecccceeecc
Q 003703 583 QNILLDSELSSKICDFGICRLVT 605 (801)
Q Consensus 583 ~NILLd~~~~vKL~DFGla~~~~ 605 (801)
.|||++ ++.+.|+|||.+-...
T Consensus 154 ~NIL~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 154 YNMLWH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred HHEEEE-CCcEEEEECCCceeCC
Confidence 999997 4689999999876554
No 455
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.05 E-value=1.1e-09 Score=112.51 Aligned_cols=139 Identities=24% Similarity=0.338 Sum_probs=106.9
Q ss_pred ceeeecCceEEEEEEECC-eEEEEEEeccCCc-ccHHHHHHHHHHHhcCCC--CceeeEeccccC-----CcceeeecCC
Q 003703 461 FKVGQGGFGCVYKGEMLG-RTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQH--PHLVTLLGACPE-----AWSLVYEYLP 531 (801)
Q Consensus 461 ~~LG~G~fG~Vy~g~~~g-~~vAiK~l~~~~~-~~~~~f~~E~~il~~l~H--pnIV~l~g~~~~-----~~~LV~E~~~ 531 (801)
..||.|.++.||++...+ ..+++|....... .....+.+|+.++..+.+ .++.++++++.+ ..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 468999999999998875 8999999765432 134467899999999965 446777777754 4579999999
Q ss_pred CCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcC----------------------------------------
Q 003703 532 NGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSK---------------------------------------- 571 (801)
Q Consensus 532 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~---------------------------------------- 571 (801)
|+++.+.+.. ..++......++.+++.+|.+||+..
T Consensus 84 G~~l~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (223)
T cd05154 84 GRVLRDRLLR----PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMER 159 (223)
T ss_pred CEecCCCCCC----CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHH
Confidence 9988776532 24566777788888888888888531
Q ss_pred -------------CCceeeCCCCCCCeeecC--CCCeeeecccceee
Q 003703 572 -------------PEKIVHGDLKPQNILLDS--ELSSKICDFGICRL 603 (801)
Q Consensus 572 -------------~~~iiHrDIKp~NILLd~--~~~vKL~DFGla~~ 603 (801)
+..++|+|++|.|||++. ++.+.|+||+.+..
T Consensus 160 ~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 160 LLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 245899999999999998 66789999987653
No 456
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=99.03 E-value=8.4e-09 Score=111.13 Aligned_cols=251 Identities=21% Similarity=0.268 Sum_probs=164.6
Q ss_pred ccceeeecCceEEEEEEECCeEEEEEEeccCCcccHHHHHHHHHHHhcC-CCCceee--------EeccccCC-cceeee
Q 003703 459 ESFKVGQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKL-QHPHLVT--------LLGACPEA-WSLVYE 528 (801)
Q Consensus 459 ~~~~LG~G~fG~Vy~g~~~g~~vAiK~l~~~~~~~~~~f~~E~~il~~l-~HpnIV~--------l~g~~~~~-~~LV~E 528 (801)
.+..||+||-+.+|..-.-+..|| |+.+......+.. -+..|... .||-+-. |+|--... ..+.|.
T Consensus 15 ~gr~LgqGgea~ly~l~e~~d~VA-KIYh~Pppa~~aq---k~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflmP 90 (637)
T COG4248 15 PGRPLGQGGEADLYTLGEVRDQVA-KIYHAPPPAAQAQ---KVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLMP 90 (637)
T ss_pred CCccccCCccceeeecchhhchhh-eeecCCCchHHHH---HHHHhccCCCCcchhhhhcccHHHhhCCCccceeEEecc
Confidence 355799999999996433333444 7766554443333 23334444 5664433 22322222 346677
Q ss_pred cCCCCch-hhhh---hhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeec
Q 003703 529 YLPNGSL-QDRL---FRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLV 604 (801)
Q Consensus 529 ~~~~gsL-~~~L---~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~ 604 (801)
.+++.-- .+++ .+....+...|+-.++.+..++.+...||..| .+-+|+.++|+|+.+++.+.|.|-..-...
T Consensus 91 ~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~G---h~vGDVn~~~~lVsd~~~V~LVdsDsfqi~ 167 (637)
T COG4248 91 KVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHG---HVVGDVNQNSFLVSDDSKVVLVDSDSFQIN 167 (637)
T ss_pred cCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcC---CcccccCccceeeecCceEEEEcccceeec
Confidence 7765421 1111 23345567899999999999999999999998 888999999999999999999985433222
Q ss_pred cCCCCcCCCccccCCCCCCCCCCCccccc-----cCCCCcchhHHhHHHHHHHHHhC-CCCCCChhH-------HHHHhh
Q 003703 605 TEDTLYLPSFHRSTAPKGSFPYADPEYHR-----TGVLTPKSDSYSFGLIILQLLTG-RLPVGLAGE-------VRRAVS 671 (801)
Q Consensus 605 ~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~-----~~~~s~ksDVwSlGvvL~ELltG-~~Pf~~~~~-------~~~~~~ 671 (801)
.++. .....+|...|.+||... +-.-+...|-|.|||++++||.| ++||..... ....+.
T Consensus 168 ~ng~-------~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia 240 (637)
T COG4248 168 ANGT-------LHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIA 240 (637)
T ss_pred cCCc-------eEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhh
Confidence 2221 234668999999999643 44567789999999999999996 999963221 233455
Q ss_pred cCccccccC------CCCCCCCHH-HHHHHHHHHHHhhhhC--CCCCCCchHHHHHHHHHhh
Q 003703 672 CGKLSSILD------PLAGDWPTF-VARRLVDLGLQCCELY--GRERPDITPSLVKELEQLH 724 (801)
Q Consensus 672 ~g~~~~~~d------~~~~~~~~~-~~~~l~~Li~~Cl~~d--P~~RPt~~e~l~~~L~~l~ 724 (801)
.|.+...-| +..+.||-. ....+..|..+|+... +.-||+.. ..+..|..+.
T Consensus 241 ~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~-aW~aAl~al~ 301 (637)
T COG4248 241 HGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAK-AWVAALDALR 301 (637)
T ss_pred cceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHH-HHHHHHHHHH
Confidence 555444333 223345543 3457788888898653 56899987 6666666553
No 457
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.02 E-value=1.9e-09 Score=105.47 Aligned_cols=128 Identities=26% Similarity=0.385 Sum_probs=102.1
Q ss_pred eeeecCceEEEEEEECCeEEEEEEeccCCccc--------HHHHHHHHHHHhcCC--CCceeeEeccccCCcceeeecCC
Q 003703 462 KVGQGGFGCVYKGEMLGRTVAIKMLYSHNMQG--------QLEFQQEVRVLSKLQ--HPHLVTLLGACPEAWSLVYEYLP 531 (801)
Q Consensus 462 ~LG~G~fG~Vy~g~~~g~~vAiK~l~~~~~~~--------~~~f~~E~~il~~l~--HpnIV~l~g~~~~~~~LV~E~~~ 531 (801)
.|++|+-+.+|.+.+.|..+++|.-.+..... .....+|..+|.+++ --+...+|.+.+....|+|||++
T Consensus 3 ~i~~GAEa~i~~~~~~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I~ 82 (204)
T COG3642 3 LIKQGAEAIIYLTDFLGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYIE 82 (204)
T ss_pred hhhCCcceeEEeeeccCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEeC
Confidence 57899999999998888888888643332211 123678999999885 44556677777788889999999
Q ss_pred CCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceee
Q 003703 532 NGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRL 603 (801)
Q Consensus 532 ~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~ 603 (801)
|..|.+.+... ...++..|-.-+.-||..+ |||+||.++||++..++ +.++||||+..
T Consensus 83 G~~lkd~l~~~----------~~~~~r~vG~~vg~lH~~g---ivHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 83 GELLKDALEEA----------RPDLLREVGRLVGKLHKAG---IVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred ChhHHHHHHhc----------chHHHHHHHHHHHHHHhcC---eecCCCccceEEEeCCc-EEEEECCcccc
Confidence 99999888543 2456778888899999998 99999999999998875 99999999874
No 458
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.01 E-value=3.1e-10 Score=127.86 Aligned_cols=244 Identities=23% Similarity=0.210 Sum_probs=168.6
Q ss_pred cCHHH-HHHHhcCccccceeeecCceEEEEEEEC---CeEEEEEEeccCCcccHHH--HHHHHHHHhcC-CCCceeeEec
Q 003703 445 FSLAD-LQTATCNFSESFKVGQGGFGCVYKGEML---GRTVAIKMLYSHNMQGQLE--FQQEVRVLSKL-QHPHLVTLLG 517 (801)
Q Consensus 445 ~~~~e-l~~at~~f~~~~~LG~G~fG~Vy~g~~~---g~~vAiK~l~~~~~~~~~~--f~~E~~il~~l-~HpnIV~l~g 517 (801)
|...+ ....+.+|.....||.|.|+.|+....+ +..|++|.+.........+ -..|+.+...+ .|.+++.++.
T Consensus 254 ~~~~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~ 333 (524)
T KOG0601|consen 254 FTTSDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNS 333 (524)
T ss_pred ecccccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCC
Confidence 33344 3445568899999999999999987654 6789999876554332222 23466555555 5888888765
Q ss_pred cc--cCCcceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCC-CCee
Q 003703 518 AC--PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSE-LSSK 594 (801)
Q Consensus 518 ~~--~~~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~-~~vK 594 (801)
.+ ....++-.|||.++++...+.-. ..+....++++..+++.++.++|+.. ++|+|+||+||++..+ +..+
T Consensus 334 ~W~~~r~~~ip~e~~~~~s~~l~~~~~---~~~d~~~~~~~~~q~~~~l~~i~s~~---~~~~d~~psni~i~~~~~~~~ 407 (524)
T KOG0601|consen 334 SWSQLRQGYIPLEFCEGGSSSLRSVTS---QMLDEDPRLRLTAQILTALNVIHSKL---FVHLDVKPSNILISNDGFFSK 407 (524)
T ss_pred CccccccccCchhhhcCcchhhhhHHH---HhcCcchhhhhHHHHHhccccccchh---hhcccccccceeeccchhhhh
Confidence 54 34577889999999887665222 23455678889999999999999977 9999999999999886 8899
Q ss_pred eecccceeeccCCCCcCCCccccCCCCCCCCC-CCccccccCCCCcchhHHhHHHHHHHHHhCCCC-CCChhHHHHHhhc
Q 003703 595 ICDFGICRLVTEDTLYLPSFHRSTAPKGSFPY-ADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLP-VGLAGEVRRAVSC 672 (801)
Q Consensus 595 L~DFGla~~~~~~~~~~~~~~~~~~~~Gt~~Y-~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~P-f~~~~~~~~~~~~ 672 (801)
++|||++..+.-.. .....++..| .+|.......+..+.|+||||.-+.+.++|.+- .....+ ..+..
T Consensus 408 ~~~~~~~t~~~~~~--------~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~~--~~i~~ 477 (524)
T KOG0601|consen 408 LGDFGCWTRLAFSS--------GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQS--LTIRS 477 (524)
T ss_pred ccccccccccceec--------ccccccccccccchhhccccccccccccccccccccccccCcccCcccccc--eeeec
Confidence 99999986432111 1111223334 355555666788999999999999999998753 222221 11222
Q ss_pred CccccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCch
Q 003703 673 GKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDIT 713 (801)
Q Consensus 673 g~~~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~ 713 (801)
|.+. ..+. ....+..+...+...++..||...
T Consensus 478 ~~~p--------~~~~-~~~~~q~~~kv~~~~~~~~~~l~~ 509 (524)
T KOG0601|consen 478 GDTP--------NLPG-LKLQLQVLLKVMINPDRKRRPSAV 509 (524)
T ss_pred cccc--------CCCc-hHHhhhhhhhhhcCCccccchhhh
Confidence 2221 1222 226777888889999999999876
No 459
>COG0589 UspA Universal stress protein UspA and related nucleotide-binding proteins [Signal transduction mechanisms]
Probab=98.98 E-value=6.5e-09 Score=100.09 Aligned_cols=133 Identities=17% Similarity=0.153 Sum_probs=100.8
Q ss_pred cEEEEEec-CCcccchhhHHHHhhhcC--CCceEEEEcCCCC-----Cc----HHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 003703 23 EKVYVALG-KCVEKGLSLLHWTLQRFG--SSREILGKLPASQ-----AS----AEVLSAFRAEERQKMKKLLDNYLRICV 90 (801)
Q Consensus 23 ~~V~VaVd-~~~~~~~~Al~Wal~n~~--~~~~~~~~v~~~~-----~~----~~~~~~~~~~~~~~~~~ll~~~~~~C~ 90 (801)
+++++++| ++..... |+.||+.... +..+.+++|.... .. ................+.+........
T Consensus 6 ~~il~~~d~~s~~~~~-a~~~a~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (154)
T COG0589 6 KKILVAVDVGSEAAEK-ALEEAVALAKRLGAPLILLVVIDPLEPTALVSVALADAPIPLSEEELEEEAEELLAEAKALAE 84 (154)
T ss_pred ceEEEEeCCCCHHHHH-HHHHHHHHHHhcCCeEEEEEEecccccccccccccccchhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 68999999 8655555 9999999764 5556666662110 00 000112233445677888888888888
Q ss_pred hcCeee-EEEEEecCCHHHHHHHHHHHhCCCEEEeccCCCCccchhcCCChhhHHHhhCCCCceEEEEe
Q 003703 91 EAEVKA-RIITTEADKIQKAIVQLMNIHGIQKLVMGAFPDNCMKVKMGSRKASYAAKNAPMFCEIWFVN 158 (801)
Q Consensus 91 ~~~v~~-~~~~~e~~d~~~~I~~~i~~~~i~~LV~G~~~~~~~~r~~~~~vs~~v~~~a~~~C~V~vv~ 158 (801)
+.++.. +..+.+++.+...|++++.++++|.||||++|.+.+++.+.||++.+|+++++ |+|+||.
T Consensus 85 ~~~~~~~~~~~~~g~~~~~~i~~~a~~~~adliV~G~~g~~~l~~~llGsvs~~v~~~~~--~pVlvv~ 151 (154)
T COG0589 85 AAGVPVVETEVVEGSPSAEEILELAEEEDADLIVVGSRGRSGLSRLLLGSVAEKVLRHAP--CPVLVVR 151 (154)
T ss_pred HcCCCeeEEEEecCCCcHHHHHHHHHHhCCCEEEECCCCCccccceeeehhHHHHHhcCC--CCEEEEc
Confidence 889885 76666655558999999999999999999999999999877889999999998 9999996
No 460
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.96 E-value=6.6e-09 Score=101.12 Aligned_cols=141 Identities=24% Similarity=0.315 Sum_probs=102.4
Q ss_pred ccceeeecCceEEEEEEECCeEEEEEEeccCCcc--------cHHHHHHHHHHHhcCCCCce--eeEeccccCCcceeee
Q 003703 459 ESFKVGQGGFGCVYKGEMLGRTVAIKMLYSHNMQ--------GQLEFQQEVRVLSKLQHPHL--VTLLGACPEAWSLVYE 528 (801)
Q Consensus 459 ~~~~LG~G~fG~Vy~g~~~g~~vAiK~l~~~~~~--------~~~~f~~E~~il~~l~HpnI--V~l~g~~~~~~~LV~E 528 (801)
....|-+|+-+.|+++.+.|+.+.||.-...... ......+|.++|.+++--.| .++|-+-.....|+||
T Consensus 11 ~l~likQGAEArv~~~~~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME 90 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYME 90 (229)
T ss_pred cceeeeccceeeEeeeccCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEEE
Confidence 4457899999999999999999999864333221 12346789999998853332 3333333456789999
Q ss_pred cCCC-CchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCC---eeeecccceee
Q 003703 529 YLPN-GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELS---SKICDFGICRL 603 (801)
Q Consensus 529 ~~~~-gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~---vKL~DFGla~~ 603 (801)
|++| .++.+++........ .-+....++..|-..+.-||.++ |||+||..+||+|..++. +.++|||++..
T Consensus 91 ~~~g~~~vk~~i~~~~~~~~-~d~~~~~~~~~iG~~igklH~nd---iiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 91 FIDGASTVKDFILSTMEDES-EDEGLAELARRIGELIGKLHDND---IIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred eccchhHHHHHHHHHccCcc-cchhHHHHHHHHHHHHHHhhhCC---eecccccccceEEecCCCcCceEEEeecchhc
Confidence 9977 367777765433222 22333678889999999999998 999999999999976543 58999999754
No 461
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=98.94 E-value=6.1e-09 Score=118.58 Aligned_cols=162 Identities=20% Similarity=0.242 Sum_probs=117.7
Q ss_pred CCeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEeccccCC--cceeeecCCCCchhhhhhhcCCCCCCCHHHHH
Q 003703 477 LGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACPEA--WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRA 554 (801)
Q Consensus 477 ~g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~--~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~ 554 (801)
.+.+|.|...+...........+-++.|+.++||||++++..+... .|||.|-+. -|..++...+ -....
T Consensus 36 ~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l~------~~~v~ 107 (690)
T KOG1243|consen 36 DGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKELG------KEEVC 107 (690)
T ss_pred cCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHHhH------HHHHH
Confidence 3778888877665542233466788899999999999999988554 599999874 4555554332 24455
Q ss_pred HHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCCCccccCCCCCCCCCCCcccccc
Q 003703 555 RIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRT 634 (801)
Q Consensus 555 ~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~ 634 (801)
-.+.||+.||.|||..+ .++|++|.-+.|+++..|..||++|-++........ ......--..|..|+.+..
T Consensus 108 ~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~------~~~~~~~~~s~~~P~~~~~ 179 (690)
T KOG1243|consen 108 LGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA------PAKSLYLIESFDDPEEIDP 179 (690)
T ss_pred HHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc------ccccchhhhcccChhhcCc
Confidence 67889999999999876 499999999999999999999999988765432210 0011112224666765433
Q ss_pred CCCCcchhHHhHHHHHHHHHhC
Q 003703 635 GVLTPKSDSYSFGLIILQLLTG 656 (801)
Q Consensus 635 ~~~s~ksDVwSlGvvL~ELltG 656 (801)
.. -..|.|-|||+++|++.|
T Consensus 180 s~--~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 180 SE--WSIDSWGLGCLIEELFNG 199 (690)
T ss_pred cc--cchhhhhHHHHHHHHhCc
Confidence 22 356999999999999999
No 462
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.70 E-value=3e-07 Score=101.87 Aligned_cols=202 Identities=22% Similarity=0.222 Sum_probs=138.8
Q ss_pred eEEEEEEE--CCeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceeeEecccc------CCcceeeecCCC-Cchhhhh
Q 003703 469 GCVYKGEM--LGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVTLLGACP------EAWSLVYEYLPN-GSLQDRL 539 (801)
Q Consensus 469 G~Vy~g~~--~g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~------~~~~LV~E~~~~-gsL~~~L 539 (801)
.+.|++.. +|..|++|+++.+..+.......-++.++++.|+|+|+|..+|. ...+|||+|.|+ ++|.+..
T Consensus 290 ~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~ 369 (655)
T KOG3741|consen 290 ITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLY 369 (655)
T ss_pred ceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHH
Confidence 56788866 49999999995543333222234577899999999999987763 236799999987 4787765
Q ss_pred hhcCC------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCC
Q 003703 540 FRKSN------------VSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTED 607 (801)
Q Consensus 540 ~~~~~------------~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~ 607 (801)
+.... ....+....|.++.|+..||.++|+.| +.-+-|.|.+||++.+.+++|+..|+...+..+
T Consensus 370 F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssG---LAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~d 446 (655)
T KOG3741|consen 370 FANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSG---LACKTLDLKKILVTGKMRIRISGCGIMDVLQED 446 (655)
T ss_pred ccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcC---ceeecccHhHeEeeCcceEEEecccceeeecCC
Confidence 53321 123567889999999999999999998 888999999999999999999999887766543
Q ss_pred CCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCCChhHHHHHhhcCccccccCCCCCCCC
Q 003703 608 TLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWP 687 (801)
Q Consensus 608 ~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~~~~~~~~~~~~g~~~~~~d~~~~~~~ 687 (801)
.. +-+. --.+-|.=-||.+++.|.||..--...+..... . .....
T Consensus 447 ~~--------------------~~le---~~Qq~D~~~lG~ll~aLAt~~~ns~~~d~~~~s----~--------~~~I~ 491 (655)
T KOG3741|consen 447 PT--------------------EPLE---SQQQNDLRDLGLLLLALATGTENSNRTDSTQSS----H--------LTRIT 491 (655)
T ss_pred CC--------------------cchh---HHhhhhHHHHHHHHHHHhhcccccccccchHHH----H--------HHHhh
Confidence 20 0010 123578889999999999996431111100000 0 01122
Q ss_pred HHHHHHHHHHHHHhhhhCCCC
Q 003703 688 TFVARRLVDLGLQCCELYGRE 708 (801)
Q Consensus 688 ~~~~~~l~~Li~~Cl~~dP~~ 708 (801)
..++.++.+++......++.+
T Consensus 492 ~~yS~D~rn~v~yl~s~~~~~ 512 (655)
T KOG3741|consen 492 TTYSTDLRNVVEYLESLNFRE 512 (655)
T ss_pred hhhhHHHHHHHHHHHhcCccc
Confidence 335556666666667766665
No 463
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.70 E-value=1.7e-07 Score=99.61 Aligned_cols=137 Identities=17% Similarity=0.116 Sum_probs=97.1
Q ss_pred eeecCceEEEEEEECCeEEEEEEeccCCcc-----------cHHHHHHHHHHHhcCCCCc--eeeEeccc-------cCC
Q 003703 463 VGQGGFGCVYKGEMLGRTVAIKMLYSHNMQ-----------GQLEFQQEVRVLSKLQHPH--LVTLLGAC-------PEA 522 (801)
Q Consensus 463 LG~G~fG~Vy~g~~~g~~vAiK~l~~~~~~-----------~~~~f~~E~~il~~l~Hpn--IV~l~g~~-------~~~ 522 (801)
+-......|++..+.|+.|.||........ ....+.+|...+.++..-+ .+.++++. ...
T Consensus 30 v~~~~~rrvvr~~~~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~ 109 (268)
T PRK15123 30 FRELEGRRTLRFELAGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRT 109 (268)
T ss_pred EecCCCceEEEEEECCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccce
Confidence 333344457778888999999977443321 1124778999888884222 23333332 123
Q ss_pred cceeeecCCCC-chhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecC-------CCCee
Q 003703 523 WSLVYEYLPNG-SLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDS-------ELSSK 594 (801)
Q Consensus 523 ~~LV~E~~~~g-sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~-------~~~vK 594 (801)
.+||+|++++. +|.+++..... .+.+...+..++.+++..+.-||..| |+|+|+++.|||++. ++.+.
T Consensus 110 s~LVte~l~~~~sL~~~~~~~~~-~~~~~~~~~~ll~~la~~i~~LH~~G---i~HgDL~~~NiLl~~~~~~~~~~~~~~ 185 (268)
T PRK15123 110 SFIITEDLAPTISLEDYCADWAT-NPPDPRLKRMLIKRVATMVRDMHAAG---INHRDCYICHFLLHLPFPGREEDLKLS 185 (268)
T ss_pred eEEEEeeCCCCccHHHHHHhhcc-cCCCHHHHHHHHHHHHHHHHHHHHCc---CccCCCChhhEEEeccccCCCCCceEE
Confidence 67999999886 89888753221 23445677789999999999999998 999999999999975 46799
Q ss_pred eecccceee
Q 003703 595 ICDFGICRL 603 (801)
Q Consensus 595 L~DFGla~~ 603 (801)
|+||+.+..
T Consensus 186 LIDl~r~~~ 194 (268)
T PRK15123 186 VIDLHRAQI 194 (268)
T ss_pred EEECCcccc
Confidence 999998753
No 464
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.63 E-value=2.5e-07 Score=92.93 Aligned_cols=125 Identities=27% Similarity=0.290 Sum_probs=80.6
Q ss_pred EEEEEEEC-CeEEEEEEeccCCcc--------------------------cHHHHHHHHHHHhcCCCC--ceeeEecccc
Q 003703 470 CVYKGEML-GRTVAIKMLYSHNMQ--------------------------GQLEFQQEVRVLSKLQHP--HLVTLLGACP 520 (801)
Q Consensus 470 ~Vy~g~~~-g~~vAiK~l~~~~~~--------------------------~~~~f~~E~~il~~l~Hp--nIV~l~g~~~ 520 (801)
.||.|... |..+|||+.+..... ......+|.+.|.++..- ++.+++.+
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~-- 78 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDY-- 78 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEE--
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEE--
Confidence 38999874 889999987432110 012356899999999755 56666654
Q ss_pred CCcceeeecCC--CCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHH-HHhcCCCceeeCCCCCCCeeecCCCCeeeec
Q 003703 521 EAWSLVYEYLP--NGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCF-LHSSKPEKIVHGDLKPQNILLDSELSSKICD 597 (801)
Q Consensus 521 ~~~~LV~E~~~--~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~y-LH~~~~~~iiHrDIKp~NILLd~~~~vKL~D 597 (801)
...+|||||++ |..+.. |.... ++......++.+++..+.. +|..+ |+|+|+.+.|||++.+ .+.|+|
T Consensus 79 ~~~~ivME~I~~~G~~~~~-l~~~~----~~~~~~~~~~~~il~~~~~~~~~~g---ivHGDLs~~NIlv~~~-~~~iID 149 (188)
T PF01163_consen 79 NRNVIVMEYIGEDGVPLPR-LKDVD----LSPEEPKELLEEILEEIIKMLHKAG---IVHGDLSEYNILVDDG-KVYIID 149 (188)
T ss_dssp ETTEEEEE--EETTEEGGC-HHHCG----GGGSTHHHHHHHHHHHHHHHHHCTT---EEESS-STTSEEEETT-CEEE--
T ss_pred eCCEEEEEecCCCccchhh-HHhcc----ccchhHHHHHHHHHHHHHHHHHhcC---ceecCCChhhEEeecc-eEEEEe
Confidence 35689999998 544443 32221 1123445677778775555 56877 9999999999999988 999999
Q ss_pred ccceeecc
Q 003703 598 FGICRLVT 605 (801)
Q Consensus 598 FGla~~~~ 605 (801)
||.+....
T Consensus 150 f~qav~~~ 157 (188)
T PF01163_consen 150 FGQAVDSS 157 (188)
T ss_dssp GTTEEETT
T ss_pred cCcceecC
Confidence 99887654
No 465
>PRK12652 putative monovalent cation/H+ antiporter subunit E; Reviewed
Probab=98.51 E-value=4.5e-07 Score=99.57 Aligned_cols=99 Identities=13% Similarity=0.203 Sum_probs=74.2
Q ss_pred cEEEEEecCCcccchhhHHHHhhhcC----CCceEEEEc-CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhh------
Q 003703 23 EKVYVALGKCVEKGLSLLHWTLQRFG----SSREILGKL-PASQASAEVLSAFRAEERQKMKKLLDNYLRICVE------ 91 (801)
Q Consensus 23 ~~V~VaVd~~~~~~~~Al~Wal~n~~----~~~~~~~~v-~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~C~~------ 91 (801)
+||+||||+|..+. .|+.+|++-.. +.++.++|| +....... ........+++++.+...+..
T Consensus 6 kkILVavDGSe~S~-~Al~~AielA~~~g~~AeL~lL~Vv~~~~~~~~-----~~~~~~~~eelle~~~~~~~~~l~~~~ 79 (357)
T PRK12652 6 NRLLVPVADSVTVR-QTVAYAVESAEEAAETPTVHLVAAASGRAVDPE-----GQDELAAAEELLERVEVWATEDLGDDA 79 (357)
T ss_pred CeEEEEeCCCHHHH-HHHHHHHHHHHhcCCCCEEEEEEEecCcccccc-----hhHHHHHHHHHHHHHHHHHHHhhhccc
Confidence 68999999965555 49999999764 368899998 22211111 112334556777887777765
Q ss_pred cCeeeEEEEEec-------CCHHHHHHHHHHHhCCCEEEeccC
Q 003703 92 AEVKARIITTEA-------DKIQKAIVQLMNIHGIQKLVMGAF 127 (801)
Q Consensus 92 ~~v~~~~~~~e~-------~d~~~~I~~~i~~~~i~~LV~G~~ 127 (801)
.||++++.++++ +++++.|+++++++++|.||||-.
T Consensus 80 ~gV~ve~~vv~~~~~~~~~G~pae~Iv~~Aee~~aDLIVm~~~ 122 (357)
T PRK12652 80 SSVTIETALLGTDEYLFGPGDYAEVLIAYAEEHGIDRVVLDPE 122 (357)
T ss_pred CCCceEEEEEeccccccCCCCHHHHHHHHHHHcCCCEEEECCC
Confidence 599999888764 799999999999999999999984
No 466
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.41 E-value=1.1e-06 Score=90.14 Aligned_cols=124 Identities=26% Similarity=0.310 Sum_probs=88.3
Q ss_pred EECCeEEEEEEeccCCc-------ccHHHHHHHHHHHhcCCCC--ceeeEeccccC------CcceeeecCCCC-chhhh
Q 003703 475 EMLGRTVAIKMLYSHNM-------QGQLEFQQEVRVLSKLQHP--HLVTLLGACPE------AWSLVYEYLPNG-SLQDR 538 (801)
Q Consensus 475 ~~~g~~vAiK~l~~~~~-------~~~~~f~~E~~il~~l~Hp--nIV~l~g~~~~------~~~LV~E~~~~g-sL~~~ 538 (801)
...++.+-+|.+..... -......+|...+..|..- ..+..+++... ..+||+|++++. +|.++
T Consensus 29 ~~~~~~y~~k~~~~~~~~~~~~~~~~~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~ 108 (206)
T PF06293_consen 29 DLVGRRYYRKRLWNKLRRDRLRFPLRRSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDL 108 (206)
T ss_pred cccceEEEECCeechhccchhhhcccchHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHH
Confidence 34466666765432211 1234577888888877432 33444444321 247999999885 78888
Q ss_pred hhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCC---Ceeeecccceeec
Q 003703 539 LFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSEL---SSKICDFGICRLV 604 (801)
Q Consensus 539 L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~---~vKL~DFGla~~~ 604 (801)
+..... ++......++.+++..+.-||..+ |+|+|+++.|||++.++ .+.|+||+-++..
T Consensus 109 ~~~~~~---~~~~~~~~ll~~l~~~i~~lH~~g---i~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 109 LQQWEQ---LDPSQRRELLRALARLIAKLHDAG---IYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred HHhhcc---cchhhHHHHHHHHHHHHHHHHHCc---CCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 865332 344667889999999999999998 99999999999999887 8999999987654
No 467
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.38 E-value=9.4e-08 Score=109.49 Aligned_cols=150 Identities=24% Similarity=0.375 Sum_probs=103.5
Q ss_pred HHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcC-CCc--cccCCCCCCCCCCCcccccc
Q 003703 558 AEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYL-PSF--HRSTAPKGSFPYADPEYHRT 634 (801)
Q Consensus 558 ~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~-~~~--~~~~~~~Gt~~Y~APE~~~~ 634 (801)
.+++.|+.|+|... .+||++|.|++|.++.++..||+.|+++-.......+. ..+ .......-...|.|||++..
T Consensus 106 ~~v~dgl~flh~sA--k~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~ 183 (700)
T KOG2137|consen 106 GNVADGLAFLHRSA--KVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG 183 (700)
T ss_pred hcccchhhhhccCc--ceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc
Confidence 34669999999976 59999999999999999999999999986654422111 000 01112234567999999999
Q ss_pred CCCCcchhHHhHHHHHHHHHhCCCC-CCChhHHHHHhhcCccccccC-CCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCc
Q 003703 635 GVLTPKSDSYSFGLIILQLLTGRLP-VGLAGEVRRAVSCGKLSSILD-PLAGDWPTFVARRLVDLGLQCCELYGRERPDI 712 (801)
Q Consensus 635 ~~~s~ksDVwSlGvvL~ELltG~~P-f~~~~~~~~~~~~g~~~~~~d-~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~ 712 (801)
...++++|+|||||++|-+..|..+ +...+.... +.+....+ .....+....+.++.+=+.+.+..++.-||++
T Consensus 184 ~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~----~~~~~~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~ 259 (700)
T KOG2137|consen 184 TTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLS----YSFSRNLLNAGAFGYSNNLPSELRESLKKLLNGDSAVRPTL 259 (700)
T ss_pred ccccccccceeeeeEEEEEecCCcchhhccCCcch----hhhhhcccccccccccccCcHHHHHHHHHHhcCCcccCcch
Confidence 8889999999999999999954444 332111100 11111111 11223445566788888889999999999966
Q ss_pred h
Q 003703 713 T 713 (801)
Q Consensus 713 ~ 713 (801)
.
T Consensus 260 ~ 260 (700)
T KOG2137|consen 260 D 260 (700)
T ss_pred h
Confidence 5
No 468
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.35 E-value=2.7e-06 Score=88.30 Aligned_cols=134 Identities=22% Similarity=0.211 Sum_probs=93.7
Q ss_pred CccccceeeecCceEEEEEEEC-CeEEEEEEeccCCcc----------------------cHHHHHHHHHHHhcCCCC--
Q 003703 456 NFSESFKVGQGGFGCVYKGEML-GRTVAIKMLYSHNMQ----------------------GQLEFQQEVRVLSKLQHP-- 510 (801)
Q Consensus 456 ~f~~~~~LG~G~fG~Vy~g~~~-g~~vAiK~l~~~~~~----------------------~~~~f~~E~~il~~l~Hp-- 510 (801)
-...+.+||-|--+.||.|... |.++|||.-.....+ ......+|..+|.+|...
T Consensus 92 ve~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~ 171 (304)
T COG0478 92 VEAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV 171 (304)
T ss_pred HHhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence 3456678999999999999986 999999975321110 112356899999998644
Q ss_pred ceeeEeccccCCcceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCC
Q 003703 511 HLVTLLGACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSE 590 (801)
Q Consensus 511 nIV~l~g~~~~~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~ 590 (801)
.+.+.+++- ...+||||++|-.|...-. .-...-.|+..|+.-+.-+-..| |||+|+++-|||++++
T Consensus 172 ~VP~P~~~n--RHaVvMe~ieG~eL~~~r~--------~~en~~~il~~il~~~~~~~~~G---iVHGDlSefNIlV~~d 238 (304)
T COG0478 172 KVPKPIAWN--RHAVVMEYIEGVELYRLRL--------DVENPDEILDKILEEVRKAYRRG---IVHGDLSEFNILVTED 238 (304)
T ss_pred CCCCccccc--cceeeeehcccceeecccC--------cccCHHHHHHHHHHHHHHHHHcC---ccccCCchheEEEecC
Confidence 666655543 4579999998876654321 11223334444555555555655 9999999999999999
Q ss_pred CCeeeeccccee
Q 003703 591 LSSKICDFGICR 602 (801)
Q Consensus 591 ~~vKL~DFGla~ 602 (801)
|.+.++||--+.
T Consensus 239 g~~~vIDwPQ~v 250 (304)
T COG0478 239 GDIVVIDWPQAV 250 (304)
T ss_pred CCEEEEeCcccc
Confidence 999999996543
No 469
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.32 E-value=1.3e-06 Score=100.57 Aligned_cols=138 Identities=20% Similarity=0.273 Sum_probs=91.6
Q ss_pred ceeeecCceEEEEEEEC-CeEEEEEEeccCCccc----------------------------------------HHHHHH
Q 003703 461 FKVGQGGFGCVYKGEML-GRTVAIKMLYSHNMQG----------------------------------------QLEFQQ 499 (801)
Q Consensus 461 ~~LG~G~fG~Vy~g~~~-g~~vAiK~l~~~~~~~----------------------------------------~~~f~~ 499 (801)
..|+.++-|.||+|++. |+.||||+.++.-... .-++.+
T Consensus 131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~ 210 (517)
T COG0661 131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR 210 (517)
T ss_pred CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence 47999999999999998 9999999986542110 011445
Q ss_pred HHHHHhcCC-----CCce--eeEeccccCCcceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHH-HHHHHhcC
Q 003703 500 EVRVLSKLQ-----HPHL--VTLLGACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASG-LCFLHSSK 571 (801)
Q Consensus 500 E~~il~~l~-----HpnI--V~l~g~~~~~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~a-L~yLH~~~ 571 (801)
|...+.+++ .|++ .++|--+.....|+|||++|..+.+...-.. ..++... |+..++.+ +.-+-..+
T Consensus 211 EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~--~g~d~k~---ia~~~~~~f~~q~~~dg 285 (517)
T COG0661 211 EAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKS--AGIDRKE---LAELLVRAFLRQLLRDG 285 (517)
T ss_pred HHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHh--cCCCHHH---HHHHHHHHHHHHHHhcC
Confidence 665555552 3332 2333223456789999999999988753332 1233233 33333332 22222233
Q ss_pred CCceeeCCCCCCCeeecCCCCeeeecccceeeccC
Q 003703 572 PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTE 606 (801)
Q Consensus 572 ~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~ 606 (801)
++|.|..|.||+++.+|.+.+.|||+...+++
T Consensus 286 ---ffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 286 ---FFHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred ---ccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 99999999999999999999999999877654
No 470
>PRK09902 hypothetical protein; Provisional
Probab=98.30 E-value=8.9e-06 Score=82.55 Aligned_cols=137 Identities=21% Similarity=0.185 Sum_probs=104.0
Q ss_pred eeeecCceEEEEEEECCeEEEEEEeccCC------cccHHHHHHHHHHHhcCC--CCceeeEecccc---C----Cccee
Q 003703 462 KVGQGGFGCVYKGEMLGRTVAIKMLYSHN------MQGQLEFQQEVRVLSKLQ--HPHLVTLLGACP---E----AWSLV 526 (801)
Q Consensus 462 ~LG~G~fG~Vy~g~~~g~~vAiK~l~~~~------~~~~~~f~~E~~il~~l~--HpnIV~l~g~~~---~----~~~LV 526 (801)
.-|+||.+.|+.-.+.|..+=+|.-...- +-+...|.+|+..|.+|. .-++.+.+ ++. . ..+||
T Consensus 25 N~~rgG~SgV~r~~~~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV 103 (216)
T PRK09902 25 NYRRNGMSGVQCVERNGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV 103 (216)
T ss_pred CcCCCCcceEEEEEeCCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence 35889999999999888889999864211 235667999999999985 33344444 331 1 25689
Q ss_pred eecCCC-CchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCC--eeeecccceee
Q 003703 527 YEYLPN-GSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELS--SKICDFGICRL 603 (801)
Q Consensus 527 ~E~~~~-gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~--vKL~DFGla~~ 603 (801)
+|-++| -+|.+++.... ..+.+...+..+..+|+..+.-||..+ +.|+|+.+.|||++.++. ++++||--++.
T Consensus 104 Te~L~g~~~L~~~l~~~~-~~~~~~~~k~~il~~va~~ia~LH~~G---v~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 104 TEDMAGFISIADWYAQHA-VSPYSDEVRQAMLKAVALAFKKMHSVN---RQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred EEeCCCCccHHHHHhcCC-cCCcchHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 997764 48888875432 234566777899999999999999998 999999999999987677 99999976553
No 471
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.23 E-value=3.6e-06 Score=96.51 Aligned_cols=139 Identities=16% Similarity=0.225 Sum_probs=92.7
Q ss_pred ceeeecCceEEEEEEEC-CeEEEEEEeccCCccc-------------------------------------HHHHHHHHH
Q 003703 461 FKVGQGGFGCVYKGEML-GRTVAIKMLYSHNMQG-------------------------------------QLEFQQEVR 502 (801)
Q Consensus 461 ~~LG~G~fG~Vy~g~~~-g~~vAiK~l~~~~~~~-------------------------------------~~~f~~E~~ 502 (801)
..||.-+.|.||+|++. |..||||+-++.-... ..+|.+|.+
T Consensus 167 ~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~ 246 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEAK 246 (538)
T ss_pred chhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHHH
Confidence 46999999999999997 8999999976542110 112555655
Q ss_pred HHhcC----CCCc------eeeEeccccCCcceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC
Q 003703 503 VLSKL----QHPH------LVTLLGACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKP 572 (801)
Q Consensus 503 il~~l----~Hpn------IV~l~g~~~~~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~ 572 (801)
-..++ .|-+ |.++|-.+.....|+||||+|..+.|.-.-... .++-. .|+..+..+ |++..-.
T Consensus 247 Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i~~~--gi~~~---~i~~~l~~~--~~~qIf~ 319 (538)
T KOG1235|consen 247 NAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAIDKR--GISPH---DILNKLVEA--YLEQIFK 319 (538)
T ss_pred hHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHHHHHc--CCCHH---HHHHHHHHH--HHHHHHh
Confidence 44443 4555 666666667778999999999988775432221 12323 333333333 2222222
Q ss_pred CceeeCCCCCCCeeec----CCCCeeeecccceeeccC
Q 003703 573 EKIVHGDLKPQNILLD----SELSSKICDFGICRLVTE 606 (801)
Q Consensus 573 ~~iiHrDIKp~NILLd----~~~~vKL~DFGla~~~~~ 606 (801)
.+++|+|-.|.||+++ .++.+.+-|||+...+.+
T Consensus 320 ~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~ 357 (538)
T KOG1235|consen 320 TGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISH 357 (538)
T ss_pred cCCccCCCCCCcEEEecCCCCCccEEEEcccccccccH
Confidence 2499999999999998 367899999999887654
No 472
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=98.22 E-value=2.5e-05 Score=78.80 Aligned_cols=105 Identities=26% Similarity=0.269 Sum_probs=84.0
Q ss_pred HHHHHHHhcCCC-CceeeEeccccCCcceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcee
Q 003703 498 QQEVRVLSKLQH-PHLVTLLGACPEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIV 576 (801)
Q Consensus 498 ~~E~~il~~l~H-pnIV~l~g~~~~~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ii 576 (801)
..|.-+|..+.+ +++++++|+|. ..+|.||.+.+++...-..-.....-+|..|.+|+.+++..+.+|+......+.
T Consensus 7 ~~E~lll~~l~~~~~~pk~lG~CG--~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~~~ 84 (188)
T PF12260_consen 7 NNEPLLLQLLQGSEPFPKLLGSCG--RFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGFFY 84 (188)
T ss_pred ccHHHHHHHcCCCCCCCCeeeECC--CEEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCcEE
Confidence 357888888875 69999999994 477999998877753210101112468999999999999999999997666688
Q ss_pred eCCCCCCCeeecCCCCeeeecccceeec
Q 003703 577 HGDLKPQNILLDSELSSKICDFGICRLV 604 (801)
Q Consensus 577 HrDIKp~NILLd~~~~vKL~DFGla~~~ 604 (801)
-.|++|+|+-++++|++|+.|...+...
T Consensus 85 lcDv~~~nfgv~~~~~lk~iDld~v~~~ 112 (188)
T PF12260_consen 85 LCDVSPDNFGVNDDGRLKLIDLDDVFVE 112 (188)
T ss_pred EeecchHHeEEeCCCcEEEEechhcchh
Confidence 8999999999999999999999876554
No 473
>smart00504 Ubox Modified RING finger domain. Modified RING finger domain, without the full complement of Zn2+-binding ligands. Probable involvement in E2-dependent ubiquitination.
Probab=98.20 E-value=7.6e-07 Score=72.83 Aligned_cols=62 Identities=50% Similarity=0.903 Sum_probs=59.0
Q ss_pred ccchhhhhhhcCCCcCCCCccccccchhhhhccCCCCCCccccccCCCCCCCchHHHHHHHHH
Q 003703 735 FLCPILQEIMHDPQVAADGFTYEGKAIRDWLENGRETSPMTNLRLSHLHLTPNHALRHAIQDW 797 (801)
Q Consensus 735 ~l~pilqeim~dP~~~~dg~ty~~~~i~~~l~~g~~~sp~t~~~l~~~~l~Pn~~lr~~~~~~ 797 (801)
+.||+..++|.+|.+.+.|++|...+|..|+.. +.++|++...++..+|+||.+||.+|++|
T Consensus 2 ~~Cpi~~~~~~~Pv~~~~G~v~~~~~i~~~~~~-~~~cP~~~~~~~~~~l~~~~~l~~~i~~~ 63 (63)
T smart00504 2 FLCPISLEVMKDPVILPSGQTYERRAIEKWLLS-HGTDPVTGQPLTHEDLIPNLALKSAIQEW 63 (63)
T ss_pred cCCcCCCCcCCCCEECCCCCEEeHHHHHHHHHH-CCCCCCCcCCCChhhceeCHHHHHHHHhC
Confidence 568999999999999999999999999999988 78999999999999999999999999998
No 474
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.17 E-value=1.2e-05 Score=83.51 Aligned_cols=137 Identities=14% Similarity=0.191 Sum_probs=80.5
Q ss_pred ceeeecCceEEEEEEECCeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCc--eeeEeccc--cCCcceeeecCCCCc-h
Q 003703 461 FKVGQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPH--LVTLLGAC--PEAWSLVYEYLPNGS-L 535 (801)
Q Consensus 461 ~~LG~G~fG~Vy~g~~~g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~Hpn--IV~l~g~~--~~~~~LV~E~~~~gs-L 535 (801)
.+||+|..+.||+. .|..+++|...... ......+|.+++..+..-+ +.+.++++ .+...+|||+++|.. +
T Consensus 7 ~~i~~G~t~~~y~~--~~~~~VlR~~~~~~--~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~~ 82 (226)
T TIGR02172 7 TQTGEGGNGESYTH--KTGKWMLKLYNPGF--DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRSF 82 (226)
T ss_pred eeecCCCCcceeEe--cCCCEEEEeCCCCC--CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccch
Confidence 46999999999983 36678889876433 2345688999998885333 34555554 334578999998863 1
Q ss_pred hhhh--------------hh----cCC--CCCCCHHHHHH-HHH----------HHHH-HHHHHHhc-CCCceeeCCCCC
Q 003703 536 QDRL--------------FR----KSN--VSPLLWKDRAR-IAA----------EIAS-GLCFLHSS-KPEKIVHGDLKP 582 (801)
Q Consensus 536 ~~~L--------------~~----~~~--~~~l~~~~~~~-i~~----------qia~-aL~yLH~~-~~~~iiHrDIKp 582 (801)
...+ .. -+. ........... +.. .+.. ...+|... .+..++|+|+.|
T Consensus 83 ~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD~~~ 162 (226)
T TIGR02172 83 SRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGDFQI 162 (226)
T ss_pred hhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecCCCC
Confidence 1111 00 010 01111111110 000 0111 12223221 123578999999
Q ss_pred CCeeecCCCCeeeeccccee
Q 003703 583 QNILLDSELSSKICDFGICR 602 (801)
Q Consensus 583 ~NILLd~~~~vKL~DFGla~ 602 (801)
.||+++.++ +.|+||+.+.
T Consensus 163 ~Nii~~~~~-~~iIDwe~a~ 181 (226)
T TIGR02172 163 GNLITSGKG-TYWIDLGDFG 181 (226)
T ss_pred CcEEEcCCC-cEEEechhcC
Confidence 999999888 9999998764
No 475
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.10 E-value=1.8e-05 Score=81.53 Aligned_cols=141 Identities=25% Similarity=0.268 Sum_probs=84.1
Q ss_pred ceeeecCceEEEEEEECCeEEEEEEeccCCcccHHHHHHHHHHHhcCCCC--ceeeEecccc-----CCcceeeecCCCC
Q 003703 461 FKVGQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHP--HLVTLLGACP-----EAWSLVYEYLPNG 533 (801)
Q Consensus 461 ~~LG~G~fG~Vy~g~~~g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~Hp--nIV~l~g~~~-----~~~~LV~E~~~~g 533 (801)
..|+.|..+.||+....+..+++|..... .....+.+|..++..+... .+.+++.++. ...+++|++++|.
T Consensus 3 ~~l~~G~~n~~~~v~~~~~~~vlK~~~~~--~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g~ 80 (239)
T PF01636_consen 3 RPLSGGFSNRVYRVTTDDGRYVLKFYRPP--DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPGR 80 (239)
T ss_dssp EEEEESSSSEEEEEEETTSEEEEEEESSH--HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESSE
T ss_pred ccCCCCCeeeEEEEEECCcEEEEEEeCCC--CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEeccc
Confidence 46899999999999998889999997544 3445677888888888432 3556665431 1247899999998
Q ss_pred chhh----------------hhh---hc-CCCCCCCHHHH---------HHH------------HHHHHH-HHHHHHhc-
Q 003703 534 SLQD----------------RLF---RK-SNVSPLLWKDR---------ARI------------AAEIAS-GLCFLHSS- 570 (801)
Q Consensus 534 sL~~----------------~L~---~~-~~~~~l~~~~~---------~~i------------~~qia~-aL~yLH~~- 570 (801)
.+.. .+. .. ....++.+... ... ...+.. .+..++..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (239)
T PF01636_consen 81 PLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQELEALL 160 (239)
T ss_dssp EHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHHHhhh
Confidence 7776 111 11 11111222110 000 111222 33444432
Q ss_pred ---CCCceeeCCCCCCCeeec-CCCCeeeecccceee
Q 003703 571 ---KPEKIVHGDLKPQNILLD-SELSSKICDFGICRL 603 (801)
Q Consensus 571 ---~~~~iiHrDIKp~NILLd-~~~~vKL~DFGla~~ 603 (801)
.+..++|+|+.|.|||++ .++.+-|+||+.+..
T Consensus 161 ~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~ 197 (239)
T PF01636_consen 161 PKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGW 197 (239)
T ss_dssp HCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EE
T ss_pred ccCCCcEEEEeccccccceeeeccceeEEEecccceE
Confidence 345699999999999999 666668999987654
No 476
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.06 E-value=2.2e-05 Score=79.98 Aligned_cols=135 Identities=19% Similarity=0.173 Sum_probs=90.3
Q ss_pred HhcCccccceeeecCceEEEEEEECCeEEEEEEeccCCcccHHH---------HHHHHHHHhcCC---CCceeeEeccc-
Q 003703 453 ATCNFSESFKVGQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLE---------FQQEVRVLSKLQ---HPHLVTLLGAC- 519 (801)
Q Consensus 453 at~~f~~~~~LG~G~fG~Vy~g~~~g~~vAiK~l~~~~~~~~~~---------f~~E~~il~~l~---HpnIV~l~g~~- 519 (801)
..++|...+.+-......|.+-..+|..+++|.........+.. ..+.+..+.+++ --..+.++-+.
T Consensus 29 ~~~~~~~~kv~k~~~r~~ValIei~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~e 108 (229)
T PF06176_consen 29 LDNNYKIIKVFKNTKRNYVALIEIDGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAAE 108 (229)
T ss_pred HhCCceEEEeecCCCccEEEEEEECCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeeee
Confidence 34667766777777777788878889999999987654332222 223444444442 22222222221
Q ss_pred ------cCCcceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCe
Q 003703 520 ------PEAWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSS 593 (801)
Q Consensus 520 ------~~~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~v 593 (801)
....+|+|||++|..|.+... ++. .++..+..++.-||..| ++|+|+.|.|++++.++ +
T Consensus 109 kk~~~~~~~~~ll~EYIeG~~l~d~~~-------i~e----~~~~ki~~~ikqlH~~G---~~HGD~hpgNFlv~~~~-i 173 (229)
T PF06176_consen 109 KKIFRYTSSYVLLMEYIEGVELNDIED-------IDE----DLAEKIVEAIKQLHKHG---FYHGDPHPGNFLVSNNG-I 173 (229)
T ss_pred eeeccceeEEEEEEEEecCeecccchh-------cCH----HHHHHHHHHHHHHHHcC---CccCCCCcCcEEEECCc-E
Confidence 234568999999988876531 211 24456778899999998 99999999999999664 9
Q ss_pred eeeccccee
Q 003703 594 KICDFGICR 602 (801)
Q Consensus 594 KL~DFGla~ 602 (801)
++.||+..+
T Consensus 174 ~iID~~~k~ 182 (229)
T PF06176_consen 174 RIIDTQGKR 182 (229)
T ss_pred EEEECcccc
Confidence 999998654
No 477
>PRK10490 sensor protein KdpD; Provisional
Probab=98.06 E-value=3.1e-05 Score=96.15 Aligned_cols=121 Identities=14% Similarity=0.135 Sum_probs=91.9
Q ss_pred CCccEEEEEecCCcccchhhHHHHhhhcC--CCceEEEEcCCC--C-CcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCe
Q 003703 20 GGGEKVYVALGKCVEKGLSLLHWTLQRFG--SSREILGKLPAS--Q-ASAEVLSAFRAEERQKMKKLLDNYLRICVEAEV 94 (801)
Q Consensus 20 ~~~~~V~VaVd~~~~~~~~Al~Wal~n~~--~~~~~~~~v~~~--~-~~~~~~~~~~~~~~~~~~~ll~~~~~~C~~~~v 94 (801)
...++|+|+|++++.+.+ .+++|.+-.. +.+++++||-.. . .+. +. +.-+..+..+|.+-|-
T Consensus 248 ~~~eriLV~v~~~~~~~~-lIr~~~rlA~~~~a~~~~l~V~~~~~~~~~~-----------~~-~~~l~~~~~lA~~lGa 314 (895)
T PRK10490 248 HTRDAILLCIGHNTGSEK-LVRTAARLAARLGSVWHAVYVETPRLHRLPE-----------KK-RRAILSALRLAQELGA 314 (895)
T ss_pred CcCCeEEEEECCCcchHH-HHHHHHHHHHhcCCCEEEEEEecCCcCcCCH-----------HH-HHHHHHHHHHHHHcCC
Confidence 356789999999766555 9999887653 778999999322 1 111 11 2234445568888877
Q ss_pred eeEEEEEecCCHHHHHHHHHHHhCCCEEEeccCCCCccchhcCCChhhHHHhhCCCCceEEEEe
Q 003703 95 KARIITTEADKIQKAIVQLMNIHGIQKLVMGAFPDNCMKVKMGSRKASYAAKNAPMFCEIWFVN 158 (801)
Q Consensus 95 ~~~~~~~e~~d~~~~I~~~i~~~~i~~LV~G~~~~~~~~r~~~~~vs~~v~~~a~~~C~V~vv~ 158 (801)
++ +.+.++||+++|++|+..+||++||||.++++.+ .+.+|+++.+++.++ .-.|+||.
T Consensus 315 ~~--~~~~~~dva~~i~~~A~~~~vt~IViG~s~~~~~--~~~~s~~~~l~r~~~-~idi~iv~ 373 (895)
T PRK10490 315 ET--ATLSDPAEEKAVLRYAREHNLGKIIIGRRASRRW--WRRESFADRLARLGP-DLDLVIVA 373 (895)
T ss_pred EE--EEEeCCCHHHHHHHHHHHhCCCEEEECCCCCCCC--ccCCCHHHHHHHhCC-CCCEEEEe
Confidence 74 4557899999999999999999999999988766 345689999999998 58999995
No 478
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=97.89 E-value=6e-05 Score=79.11 Aligned_cols=137 Identities=18% Similarity=0.142 Sum_probs=82.9
Q ss_pred eeecCc-eEEEEEEECCeEEEEEEeccCCcccHHHHHHHHHHHhcCC-CCceeeEeccccC--CcceeeecCCCCchhhh
Q 003703 463 VGQGGF-GCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQ-HPHLVTLLGACPE--AWSLVYEYLPNGSLQDR 538 (801)
Q Consensus 463 LG~G~f-G~Vy~g~~~g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~-HpnIV~l~g~~~~--~~~LV~E~~~~gsL~~~ 538 (801)
|-.|.+ ..||+....+..+.+|+..... ...+.+|+.++..+. +-.+.++++++.. ..++||++++|.+|...
T Consensus 6 ~~~g~~~~~v~~~~~~~~~~~vk~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~ 82 (244)
T cd05150 6 VTEGQSGATVYRLDGKNPGLYLKIAPSGP---TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAAL 82 (244)
T ss_pred cCCCCCcCeEEEEcCCCCcEEEEecCCCc---ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhHh
Confidence 445555 7899988777788899875543 234667888888873 4445677776643 46899999999877643
Q ss_pred h-------------------hhcCC-CCCCC--HHHHHHHHH--------------------HHHHHHHHHHhc----CC
Q 003703 539 L-------------------FRKSN-VSPLL--WKDRARIAA--------------------EIASGLCFLHSS----KP 572 (801)
Q Consensus 539 L-------------------~~~~~-~~~l~--~~~~~~i~~--------------------qia~aL~yLH~~----~~ 572 (801)
. +.... ..++. +...+.... .+...+..|-.. .+
T Consensus 83 ~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 162 (244)
T cd05150 83 WEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATRPAEED 162 (244)
T ss_pred hcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhCCCcCc
Confidence 1 11100 00111 001110000 011112222111 22
Q ss_pred CceeeCCCCCCCeeecCCCCeeeeccccee
Q 003703 573 EKIVHGDLKPQNILLDSELSSKICDFGICR 602 (801)
Q Consensus 573 ~~iiHrDIKp~NILLd~~~~vKL~DFGla~ 602 (801)
..++|+|+.|.|||++.++.+.|+||+.+.
T Consensus 163 ~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~ 192 (244)
T cd05150 163 LVVTHGDACLPNIIVDPGKFSGFIDLGRLG 192 (244)
T ss_pred eEEECCCCCCccEEEeCCcEEEEEEccccc
Confidence 459999999999999998778899998664
No 479
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=97.88 E-value=9.8e-05 Score=76.16 Aligned_cols=135 Identities=23% Similarity=0.272 Sum_probs=89.0
Q ss_pred eeeecCceEEEEEEE-CCeEEEEEEeccCCcccH-------------------HH-----HHHHHHHHhcCC--CCceee
Q 003703 462 KVGQGGFGCVYKGEM-LGRTVAIKMLYSHNMQGQ-------------------LE-----FQQEVRVLSKLQ--HPHLVT 514 (801)
Q Consensus 462 ~LG~G~fG~Vy~g~~-~g~~vAiK~l~~~~~~~~-------------------~~-----f~~E~~il~~l~--HpnIV~ 514 (801)
.|+.|--+.||+|.. .+..||+|+.+....... .. ...|+.-|.++. +-.+.+
T Consensus 55 ~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrvP~ 134 (268)
T COG1718 55 CISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRVPE 134 (268)
T ss_pred eecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCCCC
Confidence 467788889999876 489999999865432111 11 235666666663 333444
Q ss_pred EeccccCCcceeeecCCCCch-hhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCe
Q 003703 515 LLGACPEAWSLVYEYLPNGSL-QDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSS 593 (801)
Q Consensus 515 l~g~~~~~~~LV~E~~~~gsL-~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~v 593 (801)
-+++. ...|||||+....+ .-.|.. .++.......+..+++..+.-|-... .+||+||+.-|||+. ++.+
T Consensus 135 Pi~~~--~nVLvMEfIg~~g~pAP~LkD----v~~e~~e~~~~~~~~v~~~~~l~~~a--~LVHgDLSEyNiL~~-~~~p 205 (268)
T COG1718 135 PIAFR--NNVLVMEFIGDDGLPAPRLKD----VPLELEEAEGLYEDVVEYMRRLYKEA--GLVHGDLSEYNILVH-DGEP 205 (268)
T ss_pred ceeec--CCeEEEEeccCCCCCCCCccc----CCcCchhHHHHHHHHHHHHHHHHHhc--CcccccchhhheEEE-CCeE
Confidence 44433 46799999965411 111211 11222356677788888888887733 399999999999999 8899
Q ss_pred eeecccceeecc
Q 003703 594 KICDFGICRLVT 605 (801)
Q Consensus 594 KL~DFGla~~~~ 605 (801)
.|+|||-|-...
T Consensus 206 ~iID~~QaV~~~ 217 (268)
T COG1718 206 YIIDVSQAVTID 217 (268)
T ss_pred EEEECccccccC
Confidence 999999876554
No 480
>COG2205 KdpD Osmosensitive K+ channel histidine kinase [Signal transduction mechanisms]
Probab=97.81 E-value=0.00019 Score=84.10 Aligned_cols=132 Identities=18% Similarity=0.194 Sum_probs=101.8
Q ss_pred CCccEEEEEecCCcccchhhHHHHhhhcC--CCceEEEEc--CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCee
Q 003703 20 GGGEKVYVALGKCVEKGLSLLHWTLQRFG--SSREILGKL--PASQASAEVLSAFRAEERQKMKKLLDNYLRICVEAEVK 95 (801)
Q Consensus 20 ~~~~~V~VaVd~~~~~~~~Al~Wal~n~~--~~~~~~~~v--~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~C~~~~v~ 95 (801)
...++|+|+|+++..+.+ -++||-.-.. ..+.+++|| |.....+ ++.+.-|+....+|.+-|
T Consensus 246 ~~~e~ilvcI~~~~~~e~-liR~a~RlA~~~~a~~~av~v~~~~~~~~~-----------~~~~~~l~~~~~Lae~lG-- 311 (890)
T COG2205 246 AARERILVCISGSPGSEK-LIRRAARLASRLHAKWTAVYVETPELHRLS-----------EKEARRLHENLRLAEELG-- 311 (890)
T ss_pred cccceEEEEECCCCchHH-HHHHHHHHHHHhCCCeEEEEEecccccccc-----------HHHHHHHHHHHHHHHHhC--
Confidence 345799999999877666 8899876532 677888888 4333222 334445666667777665
Q ss_pred eEEEEEecCCHHHHHHHHHHHhCCCEEEeccCCCCccchhcCCChhhHHHhhCCCCceEEEEeCCcccccc
Q 003703 96 ARIITTEADKIQKAIVQLMNIHGIQKLVMGAFPDNCMKVKMGSRKASYAAKNAPMFCEIWFVNKGKHVWTK 166 (801)
Q Consensus 96 ~~~~~~e~~d~~~~I~~~i~~~~i~~LV~G~~~~~~~~r~~~~~vs~~v~~~a~~~C~V~vv~kgk~~~~r 166 (801)
++++.+.++|++++|++|+..+|+++||||-+.+..++|.+.++..+..+++++ ...|.||..+...-.|
T Consensus 312 ae~~~l~~~dv~~~i~~ya~~~~~TkiViG~~~~~rw~~~~~~~l~~~L~~~~~-~idv~ii~~~~~~~~~ 381 (890)
T COG2205 312 AEIVTLYGGDVAKAIARYAREHNATKIVIGRSRRSRWRRLFKGSLADRLAREAP-GIDVHIVALDAPPDKR 381 (890)
T ss_pred CeEEEEeCCcHHHHHHHHHHHcCCeeEEeCCCcchHHHHHhcccHHHHHHhcCC-CceEEEeeCCCCcccc
Confidence 556666789999999999999999999999999999999988889999999998 5789999765554333
No 481
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=97.80 E-value=4.2e-06 Score=95.08 Aligned_cols=186 Identities=20% Similarity=0.144 Sum_probs=127.1
Q ss_pred hcCccccceeeecCceEEEEEEECC-eEEEEEEeccCCcccHHHHHHHHHHHhcCCCCc-eeeEeccccC--Ccceeeec
Q 003703 454 TCNFSESFKVGQGGFGCVYKGEMLG-RTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPH-LVTLLGACPE--AWSLVYEY 529 (801)
Q Consensus 454 t~~f~~~~~LG~G~fG~Vy~g~~~g-~~vAiK~l~~~~~~~~~~f~~E~~il~~l~Hpn-IV~l~g~~~~--~~~LV~E~ 529 (801)
|.-+..-+-+++|+++.+||.+... +....+.+.. .....-++++|.+++||| .+..++.+.. ...+++++
T Consensus 241 ~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~-----~l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i 315 (829)
T KOG0576|consen 241 TKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQ-----TLSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRI 315 (829)
T ss_pred ccchHHHHHHHHHHhcCCCccCCChhhheeceeecc-----chhhHHHHHHHHHccCCCCcccccccCCcccccchhhhh
Confidence 3333334457999999999987652 2222343322 134556889999999999 6666666643 35688999
Q ss_pred CCCC-chhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeecCCCCeeeecccceeeccCCC
Q 003703 530 LPNG-SLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDT 608 (801)
Q Consensus 530 ~~~g-sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~ 608 (801)
+.+| +......... -.+.......+...-..+|+|||+.- =+|+| |||..+ +..|..||+....+....
T Consensus 316 ~s~~rs~~~~~~~se--~~~~~~~~~~~~r~et~~l~~l~~~~---~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~ 385 (829)
T KOG0576|consen 316 CSTGRSSALEMTVSE--IALEQYQFAYPLRKETRPLAELHSSY---KVHRD----NILGSE-EEVKLLDFAVPPQLTRTM 385 (829)
T ss_pred hcCCccccccCChhh--Hhhhhhhhhhhhhhhccccccccccc---ccCcc----cccccc-cccccccccCCcccCccc
Confidence 8777 2221111000 01111223345556677899999853 37998 777766 689999999887765432
Q ss_pred CcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHHHHHHHhCCCCCC
Q 003703 609 LYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLIILQLLTGRLPVG 661 (801)
Q Consensus 609 ~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvvL~ELltG~~Pf~ 661 (801)
......+|+.++|||+...+.+....|+|++|+--.+|--|-+|-.
T Consensus 386 -------~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~ 431 (829)
T KOG0576|consen 386 -------KPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRS 431 (829)
T ss_pred -------ccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCC
Confidence 3456789999999999999999999999999998888888877754
No 482
>PLN02876 acyl-CoA dehydrogenase
Probab=97.77 E-value=0.00024 Score=87.70 Aligned_cols=146 Identities=19% Similarity=0.258 Sum_probs=91.9
Q ss_pred cceeeecCceEEEEEEECC----eEEEEEEeccCCc-ccHHHHHHHHHHHhcCC-CCce--eeEeccccC-----Cccee
Q 003703 460 SFKVGQGGFGCVYKGEMLG----RTVAIKMLYSHNM-QGQLEFQQEVRVLSKLQ-HPHL--VTLLGACPE-----AWSLV 526 (801)
Q Consensus 460 ~~~LG~G~fG~Vy~g~~~g----~~vAiK~l~~~~~-~~~~~f~~E~~il~~l~-HpnI--V~l~g~~~~-----~~~LV 526 (801)
...|+.|.++.+|+....+ ..+++|+...... .....+.+|+.+|..+. |+++ .+++++|.+ ..++|
T Consensus 43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flV 122 (822)
T PLN02876 43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYI 122 (822)
T ss_pred EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEE
Confidence 3468999999999987763 4688887644322 23346889999999995 6655 778888754 36799
Q ss_pred eecCCCCchhh--------------------h---hhhcCC--------CCCCCHH--HHHHHH---------------H
Q 003703 527 YEYLPNGSLQD--------------------R---LFRKSN--------VSPLLWK--DRARIA---------------A 558 (801)
Q Consensus 527 ~E~~~~gsL~~--------------------~---L~~~~~--------~~~l~~~--~~~~i~---------------~ 558 (801)
|||++|..+.+ . |+.... ..+..+. ....|. -
T Consensus 123 ME~v~G~~~~~~~~~~~~~~~r~~l~~~l~~~La~LH~vd~~~~gl~~~g~~~~~~~~~l~~w~~~~~~~~~~~~~~~~~ 202 (822)
T PLN02876 123 MEYLEGRIFVDPKLPGVAPERRRAIYRATAKVLAALHSADVDAIGLGKYGRRDNYCKRQVERWAKQYLASTGEGKPPRNP 202 (822)
T ss_pred EEecCCcccCCccCCCCCHHHHHHHHHHHHHHHHHHhCCCchhcChhhcCCCCchHHHHHHHHHHHHHHhhcccCCCCCh
Confidence 99998865322 1 111100 0011111 111111 1
Q ss_pred HHHHHHHHHHhcCCC--------ceeeCCCCCCCeeecCC-CC-eeeecccceeecc
Q 003703 559 EIASGLCFLHSSKPE--------KIVHGDLKPQNILLDSE-LS-SKICDFGICRLVT 605 (801)
Q Consensus 559 qia~aL~yLH~~~~~--------~iiHrDIKp~NILLd~~-~~-vKL~DFGla~~~~ 605 (801)
.+...+.+|..+-|. .+||+|+++.|||++.+ +. +-|.||+++..-.
T Consensus 203 ~~~~l~~wL~~~~P~~~~~~~~~~LvHGD~~~~Nvl~~~~~~~v~aVLDWE~a~~Gd 259 (822)
T PLN02876 203 KMLELIDWLRENIPAEDSTGAGTGIVHGDFRIDNLVFHPTEDRVIGILDWELSTLGN 259 (822)
T ss_pred hHHHHHHHHHhcCCCccccCCCcceEecCcccccEEEcCCCCeEEEEEeeeccccCC
Confidence 233446677655443 39999999999999853 33 5799999887643
No 483
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.70 E-value=9.4e-05 Score=78.34 Aligned_cols=137 Identities=18% Similarity=0.122 Sum_probs=80.4
Q ss_pred eeecCceEEEEEEECCeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCce-eeEeccccCCcceeeecCCCCchhhh---
Q 003703 463 VGQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHL-VTLLGACPEAWSLVYEYLPNGSLQDR--- 538 (801)
Q Consensus 463 LG~G~fG~Vy~g~~~g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnI-V~l~g~~~~~~~LV~E~~~~gsL~~~--- 538 (801)
+..|-.+.+|+....|..+++|+.............+|..++..+...++ .++++.+. ..+||||++|..+...
T Consensus 4 ~~~G~tn~~y~~~~~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~~--~~~v~e~i~G~~~~~~~~~ 81 (256)
T TIGR02721 4 LSGGLTNRSWRIEHPGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVNE--HWLLVEWLEGEVITLDQFV 81 (256)
T ss_pred CCCcCcCCeEEEEeCCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEeC--CEEEEEeccCccccccccc
Confidence 55677889999887788899997654322211235678889988854333 34454443 4689999998765321
Q ss_pred --------------hhhcCC-CCCCCHHHH-HHHHHH---------HHHHHHHHHhc-----CCCceeeCCCCCCCeeec
Q 003703 539 --------------LFRKSN-VSPLLWKDR-ARIAAE---------IASGLCFLHSS-----KPEKIVHGDLKPQNILLD 588 (801)
Q Consensus 539 --------------L~~~~~-~~~l~~~~~-~~i~~q---------ia~aL~yLH~~-----~~~~iiHrDIKp~NILLd 588 (801)
|+.... ..+++.... ..+..+ +...+..+-.. .+..++|+|+.|.||+++
T Consensus 82 ~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~Nil~~ 161 (256)
T TIGR02721 82 ALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVHAYNLVVT 161 (256)
T ss_pred CchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCCcCcEEEe
Confidence 111111 112222211 111111 11112222211 123589999999999999
Q ss_pred CCCCeeeeccccee
Q 003703 589 SELSSKICDFGICR 602 (801)
Q Consensus 589 ~~~~vKL~DFGla~ 602 (801)
.++ +.|+||..|.
T Consensus 162 ~~~-~~lIDwE~a~ 174 (256)
T TIGR02721 162 PQG-LKLIDWEYAS 174 (256)
T ss_pred CCC-CEEEeccccC
Confidence 877 7899998764
No 484
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=97.67 E-value=0.0002 Score=70.12 Aligned_cols=127 Identities=20% Similarity=0.224 Sum_probs=87.8
Q ss_pred cceeeecCceEEEEEEECCeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCceee-EeccccCCcceeeecCCCCchhhh
Q 003703 460 SFKVGQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHLVT-LLGACPEAWSLVYEYLPNGSLQDR 538 (801)
Q Consensus 460 ~~~LG~G~fG~Vy~g~~~g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~-l~g~~~~~~~LV~E~~~~gsL~~~ 538 (801)
...||+|.+|.||+|.+.|..+|+|+-..++. ...+..|.++|..+.--++-+ +|.+- ...+.|||+.|-.|.+.
T Consensus 27 ~~~L~KG~~s~Vyl~~~~~~~~a~Kvrr~ds~--r~~l~kEakiLeil~g~~~~p~vy~yg--~~~i~me~i~G~~L~~~ 102 (201)
T COG2112 27 EKELAKGTTSVVYLGEWRGGEVALKVRRRDSP--RRNLEKEAKILEILAGEGVTPEVYFYG--EDFIRMEYIDGRPLGKL 102 (201)
T ss_pred hhhhhcccccEEEEeeccCceEEEEEecCCcc--hhhHHHHHHHHHHhhhcCCCceEEEec--hhhhhhhhhcCcchhhh
Confidence 45699999999999999999999999765543 445788999999987666644 33332 23455999998888775
Q ss_pred hhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCC-CCCeeecCCCCeeeecccceee
Q 003703 539 LFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLK-PQNILLDSELSSKICDFGICRL 603 (801)
Q Consensus 539 L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIK-p~NILLd~~~~vKL~DFGla~~ 603 (801)
-... +-.. ...++..---|...+ |-|..|. |..++|-+++.+.|+||..|+.
T Consensus 103 ~~~~------~rk~----l~~vlE~a~~LD~~G---I~H~El~~~~k~vlv~~~~~~iIDFd~At~ 155 (201)
T COG2112 103 EIGG------DRKH----LLRVLEKAYKLDRLG---IEHGELSRPWKNVLVNDRDVYIIDFDSATF 155 (201)
T ss_pred hhcc------cHHH----HHHHHHHHHHHHHhc---cchhhhcCCceeEEecCCcEEEEEccchhh
Confidence 4321 1122 234455544455555 8888886 4445555555999999988763
No 485
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=97.67 E-value=0.00024 Score=74.25 Aligned_cols=71 Identities=18% Similarity=0.219 Sum_probs=45.1
Q ss_pred ceeeecCce-EEEEEEECCeEEEEEEeccCCcccHHHHHHHHHHHhcCCCC---ceeeEeccccC-----CcceeeecCC
Q 003703 461 FKVGQGGFG-CVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHP---HLVTLLGACPE-----AWSLVYEYLP 531 (801)
Q Consensus 461 ~~LG~G~fG-~Vy~g~~~g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~Hp---nIV~l~g~~~~-----~~~LV~E~~~ 531 (801)
..|+.||.. .||+. +..+++|...... ....+.+|..+|..+... .+...++.+.. ..+++|++++
T Consensus 3 ~~~~~gG~~n~vy~~---~~~~VlR~~~~~~--~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i~ 77 (235)
T cd05155 3 EPVDSGGTDNATFRL---GDDMSVRLPSAAG--YAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWLE 77 (235)
T ss_pred eeccCCCcccceEEc---CCceEEEcCCccc--hHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEeec
Confidence 357877776 58874 3467788754322 234688899999887532 34444544422 2378999999
Q ss_pred CCchh
Q 003703 532 NGSLQ 536 (801)
Q Consensus 532 ~gsL~ 536 (801)
|.++.
T Consensus 78 G~~l~ 82 (235)
T cd05155 78 GETAT 82 (235)
T ss_pred CCCCC
Confidence 87764
No 486
>PRK10593 hypothetical protein; Provisional
Probab=97.55 E-value=0.00078 Score=73.08 Aligned_cols=73 Identities=19% Similarity=0.050 Sum_probs=54.2
Q ss_pred ceeeecCceEEEEEEECCeEEEEEEeccCCcccHHHHHHHHHHHhcCCC---CceeeEecccc-----CCcceeeecCCC
Q 003703 461 FKVGQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQH---PHLVTLLGACP-----EAWSLVYEYLPN 532 (801)
Q Consensus 461 ~~LG~G~fG~Vy~g~~~g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~H---pnIV~l~g~~~-----~~~~LV~E~~~~ 532 (801)
..||.|..+.||.-...+..+.+|..+.. .....|..|...|..|.- ..+.+++++|. +..+||||+++|
T Consensus 20 ~~i~~G~~~~vy~~~~~~~~~~~k~~~~~--~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~i~G 97 (297)
T PRK10593 20 ECISEQPYAALWALYDSQGNPMPLMARSF--STPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLERLRG 97 (297)
T ss_pred eecCCccceeEEEEEcCCCCEEEEEeccc--ccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEeccCC
Confidence 35999999999998776556777875331 123468899999988842 46778888763 347899999998
Q ss_pred Cch
Q 003703 533 GSL 535 (801)
Q Consensus 533 gsL 535 (801)
+++
T Consensus 98 ~~~ 100 (297)
T PRK10593 98 VSV 100 (297)
T ss_pred Eec
Confidence 765
No 487
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.52 E-value=0.0004 Score=72.32 Aligned_cols=139 Identities=19% Similarity=0.292 Sum_probs=81.5
Q ss_pred ceeeecCceEEEEEEEC---CeEEEEEEeccCCcccHHHHHHHHHHHhcCCC-CceeeEeccccCCcceeeecCCCCchh
Q 003703 461 FKVGQGGFGCVYKGEML---GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQH-PHLVTLLGACPEAWSLVYEYLPNGSLQ 536 (801)
Q Consensus 461 ~~LG~G~fG~Vy~g~~~---g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~H-pnIV~l~g~~~~~~~LV~E~~~~gsL~ 536 (801)
..|+.|-...+|+.... +..|++|+...... ......+|+.++..+.. .-.+++++.+. ..+||||++|.++.
T Consensus 4 ~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~-~~~d~~~E~~~~~~l~~~gl~P~v~~~~~--~~~l~e~i~G~~l~ 80 (235)
T cd05157 4 KRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTE-LIIDRERELRIHKLLSKHGLAPKLYATFQ--NGLIYEFIPGRTLE 80 (235)
T ss_pred EEcCCcccceEEEEEcCCCCCCeEEEEEccCCcc-ceecHHHHHHHHHHHHhCCCCCeEEEEeC--CcEEEEeeCCCcCC
Confidence 35777888999998775 57899997654322 11233478888888843 33445555543 35899999987653
Q ss_pred hh-----------------hhhcCCC---------CCCCHHHHHHHHH----------------------HHHHHHHH--
Q 003703 537 DR-----------------LFRKSNV---------SPLLWKDRARIAA----------------------EIASGLCF-- 566 (801)
Q Consensus 537 ~~-----------------L~~~~~~---------~~l~~~~~~~i~~----------------------qia~aL~y-- 566 (801)
.. |+..... ..-.|.....+.. .+...+..
T Consensus 81 ~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 160 (235)
T cd05157 81 PEDLRNPKIYRLIARELAKLHSIKPPEAISSPGTPKPILWPTIRKWINLVPTEFKKPEKFQKKTKAISFEQLRDEISWLK 160 (235)
T ss_pred HHHccChHHHHHHHHHHHHHhcccccccccccCCCCCcHHHHHHHHHHHhHHhhccccchhhhhccccHHHHHHHHHHHH
Confidence 21 1111110 1112322222211 11111111
Q ss_pred --HHhc-CCCceeeCCCCCCCeeecC-CCCeeeeccccee
Q 003703 567 --LHSS-KPEKIVHGDLKPQNILLDS-ELSSKICDFGICR 602 (801)
Q Consensus 567 --LH~~-~~~~iiHrDIKp~NILLd~-~~~vKL~DFGla~ 602 (801)
+-.. .+..++|+|+.+.|||++. ++.+.|+||..|.
T Consensus 161 ~~l~~~~~~~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~ 200 (235)
T cd05157 161 ELLSALNSPIVFCHNDLLSGNIIYNEEKNSVKFIDYEYAG 200 (235)
T ss_pred HHhcccCCCEEEEcCCCCcCcEEEeCCCCCEEEEEcccCC
Confidence 2221 2346999999999999998 5789999997664
No 488
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=97.51 E-value=0.00051 Score=69.35 Aligned_cols=124 Identities=27% Similarity=0.400 Sum_probs=89.4
Q ss_pred hcCccccceeeecCc-eEEEEEEECCeEEEEEEeccC---Cc-------c-----------cHHHHHHHHHHHhcCC---
Q 003703 454 TCNFSESFKVGQGGF-GCVYKGEMLGRTVAIKMLYSH---NM-------Q-----------GQLEFQQEVRVLSKLQ--- 508 (801)
Q Consensus 454 t~~f~~~~~LG~G~f-G~Vy~g~~~g~~vAiK~l~~~---~~-------~-----------~~~~f~~E~~il~~l~--- 508 (801)
+.+|...+.||.|.- |.||+++..|..+|||++..- .. . -..-|..|.+...+|+
T Consensus 36 ~~~I~flefLg~g~~~~~V~kv~I~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~ 115 (207)
T PF13095_consen 36 GDDIEFLEFLGHGSHDGYVFKVEIDGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAG 115 (207)
T ss_pred CCcEeeeeecCCCCceeEEEEEEECCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhcc
Confidence 378888899999999 999999999999999994221 10 0 0113889999999885
Q ss_pred CCce--eeEeccc--c-C-----------------CcceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHH
Q 003703 509 HPHL--VTLLGAC--P-E-----------------AWSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCF 566 (801)
Q Consensus 509 HpnI--V~l~g~~--~-~-----------------~~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~y 566 (801)
+.++ |+.+||. . + -+.+|.||++... .+ ..+-+.+|.+-|..
T Consensus 116 ~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~------------~~----~~~~~~~~~~dl~~ 179 (207)
T PF13095_consen 116 REGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP------------PL----QIRDIPQMLRDLKI 179 (207)
T ss_pred ccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc------------cc----chhHHHHHHHHHHH
Confidence 3344 8888886 1 0 0246777776543 11 12234567778889
Q ss_pred HHhcCCCceeeCCCCCCCeeecCCCCeeeecccce
Q 003703 567 LHSSKPEKIVHGDLKPQNILLDSELSSKICDFGIC 601 (801)
Q Consensus 567 LH~~~~~~iiHrDIKp~NILLd~~~~vKL~DFGla 601 (801)
+|..+ |+-+|+++.|.. .-||+|||.+
T Consensus 180 ~~k~g---I~~~Dv~~~ny~-----~G~lvDfs~~ 206 (207)
T PF13095_consen 180 LHKLG---IVPRDVKPRNYR-----GGKLVDFSSS 206 (207)
T ss_pred HHHCC---eeeccCcccccc-----CCEEEecccC
Confidence 99988 999999999975 4589999854
No 489
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=97.45 E-value=0.0013 Score=66.88 Aligned_cols=131 Identities=24% Similarity=0.295 Sum_probs=86.5
Q ss_pred ccceeeecCceEEEEEEECCeEEEEEEeccCC----------------cccHHHHHHHHHHHhcCC------CCceeeEe
Q 003703 459 ESFKVGQGGFGCVYKGEMLGRTVAIKMLYSHN----------------MQGQLEFQQEVRVLSKLQ------HPHLVTLL 516 (801)
Q Consensus 459 ~~~~LG~G~fG~Vy~g~~~g~~vAiK~l~~~~----------------~~~~~~f~~E~~il~~l~------HpnIV~l~ 516 (801)
....||+|+.-.||.--. .....||+..... .....++.+|+.....+. +.+|.++|
T Consensus 5 ~~~~i~~G~~R~cy~HP~-dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~ 83 (199)
T PF10707_consen 5 ESDLIAQGGERDCYQHPD-DPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFY 83 (199)
T ss_pred CCcccccCCCceEEECCC-CCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEe
Confidence 345799999999997433 3456788887665 122445677777666665 88999999
Q ss_pred ccccC--CcceeeecCCC--C----chhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceeeCCCCCCCeeec
Q 003703 517 GACPE--AWSLVYEYLPN--G----SLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSKPEKIVHGDLKPQNILLD 588 (801)
Q Consensus 517 g~~~~--~~~LV~E~~~~--g----sL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDIKp~NILLd 588 (801)
|+... +..+|+|.+.+ | +|.+++... .++. .. ...+-.-..||-..+ |+.+|++|.||++.
T Consensus 84 G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~----~~~~-~~---~~~L~~f~~~l~~~~---Iv~~dl~~~NIv~~ 152 (199)
T PF10707_consen 84 GFVETNLGLGLVVELIRDADGNISPTLEDYLKEG----GLTE-EL---RQALDEFKRYLLDHH---IVIRDLNPHNIVVQ 152 (199)
T ss_pred EEEecCCceEEEEEEEECCCCCcCccHHHHHHcC----CccH-HH---HHHHHHHHHHHHHcC---CeecCCCcccEEEE
Confidence 99855 45678887643 2 567777432 2333 22 233334456777766 99999999999996
Q ss_pred CCC----Ceeeec-ccce
Q 003703 589 SEL----SSKICD-FGIC 601 (801)
Q Consensus 589 ~~~----~vKL~D-FGla 601 (801)
.+. .+.|+| ||-.
T Consensus 153 ~~~~~~~~lvlIDG~G~~ 170 (199)
T PF10707_consen 153 RRDSGEFRLVLIDGLGEK 170 (199)
T ss_pred ecCCCceEEEEEeCCCCc
Confidence 432 467777 4533
No 490
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.36 E-value=0.00077 Score=72.83 Aligned_cols=140 Identities=18% Similarity=0.185 Sum_probs=85.3
Q ss_pred cceeeecCceEEEEEEECCeEEEEEEeccCCcccHHHHHHHHHHHhcCCCC--ceeeEeccc--------cCCcceeeec
Q 003703 460 SFKVGQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHP--HLVTLLGAC--------PEAWSLVYEY 529 (801)
Q Consensus 460 ~~~LG~G~fG~Vy~g~~~g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~Hp--nIV~l~g~~--------~~~~~LV~E~ 529 (801)
...|..|....+|+....+..+++|+... ........|+.++..+.+. .+++++... .+..++|++|
T Consensus 19 i~~i~~G~~n~~y~v~~~~~~~vLr~~~~---~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~~~ 95 (296)
T cd05153 19 FEGISAGIENTNYFVTTDSGRYVLTLFEK---VSAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALVEF 95 (296)
T ss_pred eecccCccccceEEEEeCCCcEEEEEcCC---CChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEEEe
Confidence 34577787789999887777899998764 2234456678777777432 345554432 2235689999
Q ss_pred CCCCchhh--------------hhhhcC-C-------CCCCCHHHHHH----------HHHHHHHHHHHHHh----cCCC
Q 003703 530 LPNGSLQD--------------RLFRKS-N-------VSPLLWKDRAR----------IAAEIASGLCFLHS----SKPE 573 (801)
Q Consensus 530 ~~~gsL~~--------------~L~~~~-~-------~~~l~~~~~~~----------i~~qia~aL~yLH~----~~~~ 573 (801)
++|..+.. .|+... . .....|..... ....+..++.++.. ..+.
T Consensus 96 i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~ 175 (296)
T cd05153 96 LAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPSDLPR 175 (296)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhcCCC
Confidence 99876532 111110 0 01123322210 11223344555553 2234
Q ss_pred ceeeCCCCCCCeeecCCCCeeeeccccee
Q 003703 574 KIVHGDLKPQNILLDSELSSKICDFGICR 602 (801)
Q Consensus 574 ~iiHrDIKp~NILLd~~~~vKL~DFGla~ 602 (801)
.++|+|+.|.|||++.++.+.|.||+.+.
T Consensus 176 ~l~HgD~~~~Nil~~~~~~~~iIDfe~a~ 204 (296)
T cd05153 176 GVIHADLFRDNVLFDGDELSGVIDFYFAC 204 (296)
T ss_pred cCCccCcCcccEEEeCCceEEEeehhhhc
Confidence 59999999999999998778899998764
No 491
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.34 E-value=0.0021 Score=72.15 Aligned_cols=74 Identities=16% Similarity=0.115 Sum_probs=54.4
Q ss_pred ceeeecCceEEEEEEEC-C-eEEEEEEeccC------C-cccHHHHHHHHHHHhcCC---CCceeeEeccccCCcceeee
Q 003703 461 FKVGQGGFGCVYKGEML-G-RTVAIKMLYSH------N-MQGQLEFQQEVRVLSKLQ---HPHLVTLLGACPEAWSLVYE 528 (801)
Q Consensus 461 ~~LG~G~fG~Vy~g~~~-g-~~vAiK~l~~~------~-~~~~~~f~~E~~il~~l~---HpnIV~l~g~~~~~~~LV~E 528 (801)
..||.|.+..||++... | +.|+||.-.+. . .-....+..|.+.|..+. ..+++++|.+..+..++|||
T Consensus 32 ~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~D~~~~~lVME 111 (401)
T PRK09550 32 REIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHYDEELAVTVME 111 (401)
T ss_pred eEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEECCCCCEEEEe
Confidence 35899999999999887 4 48999985322 1 123345677888888762 35678888887777899999
Q ss_pred cCCCCc
Q 003703 529 YLPNGS 534 (801)
Q Consensus 529 ~~~~gs 534 (801)
|+++..
T Consensus 112 ~L~~~~ 117 (401)
T PRK09550 112 DLSDHK 117 (401)
T ss_pred cCCCcc
Confidence 998743
No 492
>KOG4642 consensus Chaperone-dependent E3 ubiquitin protein ligase (contains TPR repeats) [Posttranslational modification, protein turnover, chaperones]
Probab=97.24 E-value=0.0002 Score=72.56 Aligned_cols=74 Identities=30% Similarity=0.548 Sum_probs=69.2
Q ss_pred cCCCCCcccchhhhhhhcCCCcCCCCccccccchhhhhccCCCCCCccccccCCCCCCCchHHHHHHHHHHhhC
Q 003703 728 ERPVPSFFLCPILQEIMHDPQVAADGFTYEGKAIRDWLENGRETSPMTNLRLSHLHLTPNHALRHAIQDWLCKS 801 (801)
Q Consensus 728 ~~~~p~~~l~pilqeim~dP~~~~dg~ty~~~~i~~~l~~g~~~sp~t~~~l~~~~l~Pn~~lr~~~~~~~~~~ 801 (801)
.+.+|.+.-+.|.-++|.+|.++++|.||+...|.+++..-....|.|.-+|..-+++||++|+-+|.+|+..|
T Consensus 205 ~rEvpd~lcgkIt~el~~~pvi~psgIty~ra~I~Ehl~rvghfdpvtr~~Lte~q~ipN~alkevIa~fl~~n 278 (284)
T KOG4642|consen 205 KREVPDYLCGKITLELMREPVITPSGITYDRADIEEHLQRVGHFDPVTRWPLTEYQLIPNLALKEVIAAFLKEN 278 (284)
T ss_pred cccccchhhhhhhHHhhcCCccCccccchhHHHHHHHHHHhccCCchhcccCCHHhhccchHHHHHHHHHHHhc
Confidence 45678888889999999999999999999999999999998899999999999999999999999999999864
No 493
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.21 E-value=0.0018 Score=70.34 Aligned_cols=138 Identities=25% Similarity=0.341 Sum_probs=82.4
Q ss_pred eeeecCceEEEEEEEC--------CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCC-ceeeEeccccCCcceeeecCCC
Q 003703 462 KVGQGGFGCVYKGEML--------GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHP-HLVTLLGACPEAWSLVYEYLPN 532 (801)
Q Consensus 462 ~LG~G~fG~Vy~g~~~--------g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~Hp-nIV~l~g~~~~~~~LV~E~~~~ 532 (801)
.|..|-...||+.... +..+++|+..... .......+|..++..+... -..++++++.+ .+|++|++|
T Consensus 5 ~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~-~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~~--~~v~e~i~G 81 (302)
T cd05156 5 KISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSV-ELLIDRERELVVFARLSERNLGPKLYGIFPN--GRIEEFIPS 81 (302)
T ss_pred EecCcccceeEEEEcCCcccccCCCCeEEEEEecCCC-cceechHHHHHHHHHHHhCCCCCceEEEeCC--CchhheeCC
Confidence 4666777799988765 3789999965543 2223456788888887432 23456666643 468999988
Q ss_pred Cchhhh-----------------hhhcCCC--------CCCCHHHHHHH--------------------------HHHHH
Q 003703 533 GSLQDR-----------------LFRKSNV--------SPLLWKDRARI--------------------------AAEIA 561 (801)
Q Consensus 533 gsL~~~-----------------L~~~~~~--------~~l~~~~~~~i--------------------------~~qia 561 (801)
..+... |+..... .+..|.....+ ...+.
T Consensus 82 ~~l~~~~~~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (302)
T cd05156 82 RTLTTEELRDPDISAEIARRMAKLHSIVVPLSPEERDLTPAIWKLLKQWLDLAETVIEIVDSDSEKLLEVELSLFLEDEA 161 (302)
T ss_pred CcCCHhHcCCcHHHHHHHHHHHHhhCCCCCCCCCcCcccchHHHHHHHHHHHhhhhhhhcccchhhhhhhhHHHHHHHHH
Confidence 766431 1111110 01112111111 11222
Q ss_pred HHHHHHHh------cCCCceeeCCCCCCCeeecCC----CCeeeeccccee
Q 003703 562 SGLCFLHS------SKPEKIVHGDLKPQNILLDSE----LSSKICDFGICR 602 (801)
Q Consensus 562 ~aL~yLH~------~~~~~iiHrDIKp~NILLd~~----~~vKL~DFGla~ 602 (801)
..+.+|-. ..+..++|+|+.|.|||++.+ +.+.|+||..|.
T Consensus 162 ~~~~~l~~~~~~~~~~~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~ 212 (302)
T cd05156 162 KYLRFLLESTSEESGSPVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYAS 212 (302)
T ss_pred HHHHHHHhhccCCCCCCceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCC
Confidence 23334432 234569999999999999985 889999998764
No 494
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=97.18 E-value=9.1e-05 Score=91.26 Aligned_cols=159 Identities=13% Similarity=-0.054 Sum_probs=117.4
Q ss_pred HHHHHHHHhcCCCCceeeEecccc----CCcceeeecCCCCchhhhhhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHhcC
Q 003703 497 FQQEVRVLSKLQHPHLVTLLGACP----EAWSLVYEYLPNGSLQDRLFRKS-NVSPLLWKDRARIAAEIASGLCFLHSSK 571 (801)
Q Consensus 497 f~~E~~il~~l~HpnIV~l~g~~~----~~~~LV~E~~~~gsL~~~L~~~~-~~~~l~~~~~~~i~~qia~aL~yLH~~~ 571 (801)
...|++.++...|++++..+.-.+ ...+.+++|+.+|.+.+.|.+.. ..+++...-+.....+...+..-+|+..
T Consensus 1276 ll~e~de~~~~~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~t 1355 (2724)
T KOG1826|consen 1276 LLSERDELREAKHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLT 1355 (2724)
T ss_pred hhhhhhhhhhhhceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhcc
Confidence 345666666778999988765442 24678999999999999887653 2333433333333333355555655433
Q ss_pred --CCceeeCCCCCCCeeecCCCCeeeecccceeeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCcchhHHhHHHH
Q 003703 572 --PEKIVHGDLKPQNILLDSELSSKICDFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTPKSDSYSFGLI 649 (801)
Q Consensus 572 --~~~iiHrDIKp~NILLd~~~~vKL~DFGla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~ksDVwSlGvv 649 (801)
..-.+|+++|+-|.+|+.+.++|++++|+.+..++... ......+++.|+.|++...-.++.++|+|..|+.
T Consensus 1356 nlg~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp~~s------f~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ 1429 (2724)
T KOG1826|consen 1356 NLGNTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNPVLS------FFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLS 1429 (2724)
T ss_pred cCCccchhhhhhhhccceecCCcccccccccccccCchHh------hhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 23478999999999999999999999999995544332 2345678889999999988899999999999999
Q ss_pred HHHHHhCCCCCC
Q 003703 650 ILQLLTGRLPVG 661 (801)
Q Consensus 650 L~ELltG~~Pf~ 661 (801)
+|++.-|..+|.
T Consensus 1430 ly~rs~~n~~fi 1441 (2724)
T KOG1826|consen 1430 LYLRSDGNAYFI 1441 (2724)
T ss_pred HHHHhcccHHHH
Confidence 999999998874
No 495
>PRK05231 homoserine kinase; Provisional
Probab=97.12 E-value=0.0059 Score=66.79 Aligned_cols=155 Identities=15% Similarity=0.188 Sum_probs=82.1
Q ss_pred cCHHHHHHHhcCccc-----cceeeecCceEEEEEEECCeEEEEEEeccCCcccHHHHHHHHHHHhcCC--CCceeeEec
Q 003703 445 FSLADLQTATCNFSE-----SFKVGQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQ--HPHLVTLLG 517 (801)
Q Consensus 445 ~~~~el~~at~~f~~-----~~~LG~G~fG~Vy~g~~~g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~--HpnIV~l~g 517 (801)
++..++...-..|.. ...|+.|....+|.....+..+++|+.... .......|+.++..|. .-.+.+.+.
T Consensus 7 ls~~~l~~~l~~y~~~~~~~~~~l~~G~~n~~y~v~t~~g~~vLK~~~~~---~~~~l~~~~~~l~~L~~~glpvP~~i~ 83 (319)
T PRK05231 7 VSDDELAAFLAPYDLGELLSLKGIAEGIENSNFFLTTTQGEYVLTLFERL---TAEDLPFFLGLMQHLAARGVPVPAPVA 83 (319)
T ss_pred CCHHHHHHHHHhcCCchhhccchhccccccceEEEEeCCCcEEEEEeccC---ChHHhHHHHHHHHHHHHCCCCCCccee
Confidence 444555444344433 234667777899998877668999987521 1222333445554442 112333332
Q ss_pred c--------ccCCcceeeecCCCCchh-----------hh---hhhcCC--------CCCCCH-HHHHHH----------
Q 003703 518 A--------CPEAWSLVYEYLPNGSLQ-----------DR---LFRKSN--------VSPLLW-KDRARI---------- 556 (801)
Q Consensus 518 ~--------~~~~~~LV~E~~~~gsL~-----------~~---L~~~~~--------~~~l~~-~~~~~i---------- 556 (801)
. ..+..+++++|++|..+. .. |+.... ...+.| .....-
T Consensus 84 ~~~G~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~G~~LA~lH~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (319)
T PRK05231 84 RRDGAALGELAGKPAAIVTFLEGKWPRAPTAAHCAEVGEMLARMHLAGRDFPLERPNLRGLAWWRELAPRLLPFLADEQA 163 (319)
T ss_pred CCCCCEeeeeCCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHhhhhcCCccCCCCCChHHHHHHHHHHhhccChhHH
Confidence 1 133467899999987542 11 111110 011212 221111
Q ss_pred --H-HHHHHHHHHHHhc----CCCceeeCCCCCCCeeecCCCCeeeeccccee
Q 003703 557 --A-AEIASGLCFLHSS----KPEKIVHGDLKPQNILLDSELSSKICDFGICR 602 (801)
Q Consensus 557 --~-~qia~aL~yLH~~----~~~~iiHrDIKp~NILLd~~~~vKL~DFGla~ 602 (801)
. ..+...+..+... -|..+||+|+.|.|||++.+...-|+||+.+.
T Consensus 164 ~~l~~~~~~~~~~~~~~~~~~lp~~liHgD~~~~Nil~~~~~~~~iIDf~~~~ 216 (319)
T PRK05231 164 ALLEAELAAQLAFLASAAWPALPRGVIHADLFRDNVLFEGDRLSGFIDFYFAC 216 (319)
T ss_pred HHHHHHHHHHHHhhhccccccCCcccCCCCCCCCcEEEECCceEEEEeccccc
Confidence 1 1111122333211 34579999999999999977656899998764
No 496
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=97.11 E-value=0.0015 Score=79.65 Aligned_cols=196 Identities=21% Similarity=0.210 Sum_probs=133.2
Q ss_pred HHHHHHHhcCCCCceeeEeccccCC------cceeeecCCCCchhhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcC
Q 003703 498 QQEVRVLSKLQHPHLVTLLGACPEA------WSLVYEYLPNGSLQDRLFRKSNVSPLLWKDRARIAAEIASGLCFLHSSK 571 (801)
Q Consensus 498 ~~E~~il~~l~HpnIV~l~g~~~~~------~~LV~E~~~~gsL~~~L~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~ 571 (801)
.-|...+.++.|+|++.+++|..+. ..+.-+++..-++...+.... .++....+.+..++..||.|+|+..
T Consensus 230 E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~---~i~~~~~r~~~~~~~~GL~~~h~~~ 306 (1351)
T KOG1035|consen 230 EIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVG---SIPLETLRILHQKLLEGLAYLHSLS 306 (1351)
T ss_pred HHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhcc---ccCHHHHHHHHHHHhhhHHHHHHhc
Confidence 3566778888999999998876332 123457888888888775543 5677888889999999999999975
Q ss_pred CCceeeCCCCCC---CeeecCCCCeeee--cccceeeccCCCCcCCCccccCCCCCCCCCCCccccccCCCCc--chhHH
Q 003703 572 PEKIVHGDLKPQ---NILLDSELSSKIC--DFGICRLVTEDTLYLPSFHRSTAPKGSFPYADPEYHRTGVLTP--KSDSY 644 (801)
Q Consensus 572 ~~~iiHrDIKp~---NILLd~~~~vKL~--DFGla~~~~~~~~~~~~~~~~~~~~Gt~~Y~APE~~~~~~~s~--ksDVw 644 (801)
..|.-+..+ +...+..+.+.++ ||+..+....... .....-+..|.+||......++. ..|+|
T Consensus 307 ---l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~-------~~~~~~~~~~~~~e~~~~~~~~~~r~~dL~ 376 (1351)
T KOG1035|consen 307 ---LEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEK-------SFSDLLAEIRNADEDLKENTAKKSRLTDLW 376 (1351)
T ss_pred ---cceeEEecccccccccCccceeecchhhhcccccCCCccc-------chhhcCccccccccccccccchhhhhhHHH
Confidence 555555444 4555667777777 9988876654332 12223445688888776665554 47999
Q ss_pred hHHHHHHHHHhCCCCCCChhHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHhhhhCCCCCCCchHHHHHHHHH
Q 003703 645 SFGLIILQLLTGRLPVGLAGEVRRAVSCGKLSSILDPLAGDWPTFVARRLVDLGLQCCELYGRERPDITPSLVKELEQ 722 (801)
Q Consensus 645 SlGvvL~ELltG~~Pf~~~~~~~~~~~~g~~~~~~d~~~~~~~~~~~~~l~~Li~~Cl~~dP~~RPt~~e~l~~~L~~ 722 (801)
.+|.++..+..|..+-.....+ ..+++.. ....+.+...+|+..++++|+...+.+-+.+..
T Consensus 377 ~lgll~~~~~~~~~i~~~~~~~---------~~~l~~~-------~~~~~~d~~~~~~~~~~~~Rl~~~~ll~~~f~~ 438 (1351)
T KOG1035|consen 377 CLGLLLLQLSQGEDISEKSAVP---------VSLLDVL-------STSELLDALPKCLDEDSEERLSALELLTHPFLR 438 (1351)
T ss_pred HHHHHHhhhhhcCcccccccch---------hhhhccc-------cchhhhhhhhhhcchhhhhccchhhhhhchhcc
Confidence 9999999999987664321111 1111111 011566777889999999999998766555544
No 497
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=96.96 E-value=0.011 Score=64.47 Aligned_cols=140 Identities=16% Similarity=0.178 Sum_probs=81.0
Q ss_pred ceeeecCceEEEEEEECCeEEEEEEeccCCcccHHHHHHHHHHHhcCCC--CceeeEeccc--------cCCcceeeecC
Q 003703 461 FKVGQGGFGCVYKGEMLGRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQH--PHLVTLLGAC--------PEAWSLVYEYL 530 (801)
Q Consensus 461 ~~LG~G~fG~Vy~g~~~g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~H--pnIV~l~g~~--------~~~~~LV~E~~ 530 (801)
..|+.|....+|+....+..+++|+..... .......|+.++..|.. -++++++... .+..+++++|+
T Consensus 28 ~~~~~G~~n~~y~v~t~~~~~vLK~~~~~~--~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~l~e~i 105 (307)
T TIGR00938 28 KGIAEGVENSNYLLTTDVGRYILTLYEKRV--KAEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPACLVEFL 105 (307)
T ss_pred cccCCccccceEEEEeCCCcEEEEEecCCC--CHHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEEEEEeC
Confidence 346677778999987766678899875432 12334556677766632 2244444432 22356899999
Q ss_pred CCCchhh--------------hhhhcCC-C--------CCCCHHHHHH------------HHHHHHHHHHHHHh----cC
Q 003703 531 PNGSLQD--------------RLFRKSN-V--------SPLLWKDRAR------------IAAEIASGLCFLHS----SK 571 (801)
Q Consensus 531 ~~gsL~~--------------~L~~~~~-~--------~~l~~~~~~~------------i~~qia~aL~yLH~----~~ 571 (801)
+|..+.. .++.... . ..-.|..... ....+...+.++.. ..
T Consensus 106 ~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~ 185 (307)
T TIGR00938 106 QGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYLDKFWPRDL 185 (307)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHHHhhhhhcC
Confidence 8865421 1111111 0 0012221110 01123344555543 23
Q ss_pred CCceeeCCCCCCCeeecCCCCeeeeccccee
Q 003703 572 PEKIVHGDLKPQNILLDSELSSKICDFGICR 602 (801)
Q Consensus 572 ~~~iiHrDIKp~NILLd~~~~vKL~DFGla~ 602 (801)
+..++|+|+.+.||+++.++.+.|+||+.+.
T Consensus 186 ~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~ 216 (307)
T TIGR00938 186 PRGVIHADLFPDNVLFDGDSVKGVIDFYFAC 216 (307)
T ss_pred CCccCCCCCCcCcEEEECCceEEEeeccccc
Confidence 4579999999999999998877899998653
No 498
>cd01984 AANH_like Adenine nucleotide alpha hydrolases superfamily including N type ATP PPases, ATP sulphurylases Universal Stress Response protein and electron transfer flavoprotein (ETF). The domain forms a apha/beta/apha fold which binds to Adenosine nucleotide.
Probab=96.79 E-value=0.0026 Score=55.28 Aligned_cols=82 Identities=16% Similarity=0.242 Sum_probs=63.9
Q ss_pred EEEEecCCcccchhhHHHHhhhcC-CCceEEEEcCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCeeeEEEEEec
Q 003703 25 VYVALGKCVEKGLSLLHWTLQRFG-SSREILGKLPASQASAEVLSAFRAEERQKMKKLLDNYLRICVEAEVKARIITTEA 103 (801)
Q Consensus 25 V~VaVd~~~~~~~~Al~Wal~n~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~C~~~~v~~~~~~~e~ 103 (801)
|+|||++...|.. +|.||.+... +..++++++.
T Consensus 1 ilv~~sgg~dS~~-~l~~~~~~~~~~~~~~~~~~~--------------------------------------------- 34 (86)
T cd01984 1 ILVALSGGLDSSV-LLHLAKRLKSGGPEVVALVVV--------------------------------------------- 34 (86)
T ss_pred CEEEeeCCHHHHH-HHHHHHHHHhcCCCEEEEEeH---------------------------------------------
Confidence 5789999666555 9999988632 4556666544
Q ss_pred CCHHHHHHHHHHHhCCCEEEeccCCCCccchhcCC-ChhhHHHhhCCCCceEE
Q 003703 104 DKIQKAIVQLMNIHGIQKLVMGAFPDNCMKVKMGS-RKASYAAKNAPMFCEIW 155 (801)
Q Consensus 104 ~d~~~~I~~~i~~~~i~~LV~G~~~~~~~~r~~~~-~vs~~v~~~a~~~C~V~ 155 (801)
-..+.|.+++.+++++.||+|.+++....+.+++ +++.++++.++ |+|+
T Consensus 35 -~~~~~~~~~a~~~~~~~Iv~G~~~~d~~~~~~~~~~~~~~~~~~~~--~~vl 84 (86)
T cd01984 35 -AFVRILKRLAAEEGADVIILGHNADDVAGRRLGASANVLVVIKGAG--IPVL 84 (86)
T ss_pred -HHHHHHHHHHHHcCCCEEEEcCCchhhhhhccCchhhhhhcccccC--Ccee
Confidence 4566788899999999999999998888877655 78899999988 7775
No 499
>PLN02236 choline kinase
Probab=96.76 E-value=0.0091 Score=66.21 Aligned_cols=138 Identities=19% Similarity=0.264 Sum_probs=82.0
Q ss_pred eeeecCceEEEEEEEC------CeEEEEEEeccCCcccHHHHHHHHHHHhcCCCCce-eeEeccccCCcceeeecCCCCc
Q 003703 462 KVGQGGFGCVYKGEML------GRTVAIKMLYSHNMQGQLEFQQEVRVLSKLQHPHL-VTLLGACPEAWSLVYEYLPNGS 534 (801)
Q Consensus 462 ~LG~G~fG~Vy~g~~~------g~~vAiK~l~~~~~~~~~~f~~E~~il~~l~HpnI-V~l~g~~~~~~~LV~E~~~~gs 534 (801)
.|-.|-...+|+.... +..|++|+....... .-...+|..++..+..-++ .++++.+... .|++|+++.+
T Consensus 43 ~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~-~idR~~E~~~~~~l~~~gl~P~~~~~~~~g--~v~efi~g~~ 119 (344)
T PLN02236 43 PLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVEL-FFDRDDEIRTFECMSRHGQGPRLLGRFPNG--RVEEFIHART 119 (344)
T ss_pred EcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCe-eechHHHHHHHHHHHHcCCCCceEEEECCc--eEEEeeCCCC
Confidence 4555778899998753 367899987654322 1223678888888854333 4566766543 6899998766
Q ss_pred hhhh-----------------hhhcCC---CCCCCHHHHHHHHHHH-----------------HHHHHHH----Hh-cCC
Q 003703 535 LQDR-----------------LFRKSN---VSPLLWKDRARIAAEI-----------------ASGLCFL----HS-SKP 572 (801)
Q Consensus 535 L~~~-----------------L~~~~~---~~~l~~~~~~~i~~qi-----------------a~aL~yL----H~-~~~ 572 (801)
|... ++.... ..+..|....++..++ ...+..| .. ..+
T Consensus 120 l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~~~~~~~ 199 (344)
T PLN02236 120 LSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKELSGDDQE 199 (344)
T ss_pred CCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHhcccCCC
Confidence 6421 111110 1122344443433221 1112222 22 223
Q ss_pred CceeeCCCCCCCeeecC-CCCeeeeccccee
Q 003703 573 EKIVHGDLKPQNILLDS-ELSSKICDFGICR 602 (801)
Q Consensus 573 ~~iiHrDIKp~NILLd~-~~~vKL~DFGla~ 602 (801)
..++|+|+++.|||++. ++.+.|+||..|.
T Consensus 200 ~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~ 230 (344)
T PLN02236 200 IGFCHNDLQYGNIMIDEETRAITIIDYEYAS 230 (344)
T ss_pred ceEEeCCCCcCcEEEeCCCCcEEEEeehhcc
Confidence 45899999999999986 4689999998764
No 500
>PLN02756 S-methyl-5-thioribose kinase
Probab=96.71 E-value=0.014 Score=65.56 Aligned_cols=72 Identities=17% Similarity=0.074 Sum_probs=51.7
Q ss_pred ceeeecCceEEEEEEECCeEEEEEEeccCCc-------ccHHHHHHHHHHHhcCC---CCceeeEeccccCCcceeeecC
Q 003703 461 FKVGQGGFGCVYKGEMLGRTVAIKMLYSHNM-------QGQLEFQQEVRVLSKLQ---HPHLVTLLGACPEAWSLVYEYL 530 (801)
Q Consensus 461 ~~LG~G~fG~Vy~g~~~g~~vAiK~l~~~~~-------~~~~~f~~E~~il~~l~---HpnIV~l~g~~~~~~~LV~E~~ 530 (801)
+.||.|....||+....+..|+||.-..... .....-..|...|..+. ..+++++|.+|.+..+++|||+
T Consensus 38 ~eiggGn~N~VyrV~~~~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~ded~~vlvME~L 117 (418)
T PLN02756 38 KEVGDGNLNFVYIVVSSSGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDRTMALIGMRYL 117 (418)
T ss_pred EEcCCCceeeEEEEEcCCccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECCCCCEEEEeec
Confidence 4589999999999887777899997542111 12222334566666553 3578889999998899999999
Q ss_pred CC
Q 003703 531 PN 532 (801)
Q Consensus 531 ~~ 532 (801)
++
T Consensus 118 ~~ 119 (418)
T PLN02756 118 EP 119 (418)
T ss_pred CC
Confidence 77
Done!