BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003704
(801 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 179 bits (454), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 104/292 (35%), Positives = 161/292 (55%), Gaps = 6/292 (2%)
Query: 497 RSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLE 556
+ F++ LQ +++FS +N++G G G VY+ +L DG L+AVK+L K Q + +F
Sbjct: 26 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRL-KEERXQGGELQFQT 84
Query: 557 LVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRM 616
V I H N++ L+G+C +RLL+Y Y +NG++ L E + L W R R+
Sbjct: 85 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 144
Query: 617 ALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHL 676
ALG+AR L YLH+ C P I+HR+ K+ANI V D GLA L+ + +
Sbjct: 145 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-XHVXXAV 203
Query: 677 LTAYGYGAPEF-ESGIYTCQSDVYSFGVVMLELLTGRKSYDRTR--NRGEQFLVRWAIPQ 733
G+ APE+ +G + ++DV+ +GV++LEL+TG++++D R N + L+ W
Sbjct: 204 RGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 263
Query: 734 LHDIDALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDL 785
L + L +VD L G Y + + + C QS P RP MSEVV+ L
Sbjct: 264 LKE-KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 314
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 178 bits (452), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 104/292 (35%), Positives = 161/292 (55%), Gaps = 6/292 (2%)
Query: 497 RSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLE 556
+ F++ LQ +++F +N++G G G VY+ +L DG L+AVK+L K +Q + +F
Sbjct: 18 KRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRL-KEERTQGGELQFQT 76
Query: 557 LVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRM 616
V I H N++ L+G+C +RLL+Y Y +NG++ L E + L W R R+
Sbjct: 77 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 136
Query: 617 ALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHL 676
ALG+AR L YLH+ C P I+HR+ K+ANI V D GLA L+ + +
Sbjct: 137 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-XHVXXAV 195
Query: 677 LTAYGYGAPEFES-GIYTCQSDVYSFGVVMLELLTGRKSYDRTR--NRGEQFLVRWAIPQ 733
G+ APE+ S G + ++DV+ +GV++LEL+TG++++D R N + L+ W
Sbjct: 196 RGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 255
Query: 734 LHDIDALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDL 785
L + L +VD L G Y + + + C QS P RP MSEVV+ L
Sbjct: 256 LKE-KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 102/306 (33%), Positives = 160/306 (52%), Gaps = 8/306 (2%)
Query: 486 STKTAKPFTTARSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRA 545
S+ PF + R + L++ TN+F + LIG G+ G VY+ L DG +A+K+ +
Sbjct: 17 SSSYLVPFESYR-VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR--RTP 73
Query: 546 SSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELK 605
S Q +EF + + RH ++V L G+C E + +LIY+Y NG L+ L+ D
Sbjct: 74 ESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPT 133
Query: 606 NNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS 665
++SW R+ + +GAAR L YLH I+HR+ KS NI ++D G++ +
Sbjct: 134 MSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGT 190
Query: 666 SGSVSQLSGHLLTAYGYGAPE-FESGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQ 724
+ L + GY PE F G T +SDVYSFGVV+ E+L R + ++ R
Sbjct: 191 ELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMV 250
Query: 725 FLVRWAIPQLHDIDALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQD 784
L WA+ + H+ L ++VDP+L+ + +SL F D +C+ E RP M +V+
Sbjct: 251 NLAEWAV-ESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWK 309
Query: 785 LVDMIR 790
L +R
Sbjct: 310 LEYALR 315
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 102/306 (33%), Positives = 160/306 (52%), Gaps = 8/306 (2%)
Query: 486 STKTAKPFTTARSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRA 545
S+ PF + R + L++ TN+F + LIG G+ G VY+ L DG +A+K+ +
Sbjct: 17 SSSYLVPFESYR-VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR--RTP 73
Query: 546 SSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELK 605
S Q +EF + + RH ++V L G+C E + +LIY+Y NG L+ L+ D
Sbjct: 74 ESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPT 133
Query: 606 NNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS 665
++SW R+ + +GAAR L YLH I+HR+ KS NI ++D G++ +
Sbjct: 134 MSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGT 190
Query: 666 SGSVSQLSGHLLTAYGYGAPE-FESGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQ 724
+ L + GY PE F G T +SDVYSFGVV+ E+L R + ++ R
Sbjct: 191 ELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMV 250
Query: 725 FLVRWAIPQLHDIDALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQD 784
L WA+ + H+ L ++VDP+L+ + +SL F D +C+ E RP M +V+
Sbjct: 251 NLAEWAV-ESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWK 309
Query: 785 LVDMIR 790
L +R
Sbjct: 310 LEYALR 315
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 149/303 (49%), Gaps = 16/303 (5%)
Query: 494 TTARSFTIASLQQYTNSFSQE------NLIGAGMLGSVYRAQLPDGKLLAVKKLDKRA-- 545
T SF+ L+ TN+F + N +G G G VY+ + + +AVKKL
Sbjct: 10 TRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDI 68
Query: 546 SSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELK 605
++++ +F + + + + +H N+VEL G+ ++ L+Y Y NG+L D L D
Sbjct: 69 TTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP 128
Query: 606 NNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS 665
LSW+ R ++A GAA + +LHE +HR+ KSANI +SD GLA
Sbjct: 129 P-LSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASE 184
Query: 666 SGSVSQLSGHLLTAYGYGAPEFESGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQF 725
+ + + ++ Y APE G T +SD+YSFGVV+LE++TG + D +R Q
Sbjct: 185 KFAQTVMXSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVD--EHREPQL 242
Query: 726 LVRWAIPQLHDIDALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDL 785
L+ + + +D ++ + S+ + S+C+ + RP + +V Q L
Sbjct: 243 LLDIKEEIEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 301
Query: 786 VDM 788
+M
Sbjct: 302 QEM 304
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 149/303 (49%), Gaps = 16/303 (5%)
Query: 494 TTARSFTIASLQQYTNSFSQE------NLIGAGMLGSVYRAQLPDGKLLAVKKLDKRA-- 545
T SF+ L+ TN+F + N +G G G VY+ + + +AVKKL
Sbjct: 10 TRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDI 68
Query: 546 SSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELK 605
++++ +F + + + + +H N+VEL G+ ++ L+Y Y NG+L D L D
Sbjct: 69 TTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP 128
Query: 606 NNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS 665
LSW+ R ++A GAA + +LHE +HR+ KSANI +SD GLA
Sbjct: 129 P-LSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASE 184
Query: 666 SGSVSQLSGHLLTAYGYGAPEFESGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQF 725
+ + + ++ Y APE G T +SD+YSFGVV+LE++TG + D +R Q
Sbjct: 185 KFAQTVMXXRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVD--EHREPQL 242
Query: 726 LVRWAIPQLHDIDALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDL 785
L+ + + +D ++ + S+ + S+C+ + RP + +V Q L
Sbjct: 243 LLDIKEEIEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 301
Query: 786 VDM 788
+M
Sbjct: 302 QEM 304
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 148/303 (48%), Gaps = 16/303 (5%)
Query: 494 TTARSFTIASLQQYTNSFSQE------NLIGAGMLGSVYRAQLPDGKLLAVKKLDKRA-- 545
T SF+ L+ TN+F + N +G G G VY+ + + +AVKKL
Sbjct: 4 TRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDI 62
Query: 546 SSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELK 605
++++ +F + + + + +H N+VEL G+ ++ L+Y Y NG+L D L D
Sbjct: 63 TTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP 122
Query: 606 NNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS 665
LSW+ R ++A GAA + +LHE +HR+ KSANI +SD GLA
Sbjct: 123 P-LSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASE 178
Query: 666 SGSVSQLSGHLLTAYGYGAPEFESGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQF 725
+ + ++ Y APE G T +SD+YSFGVV+LE++TG + D +R Q
Sbjct: 179 KFAQXVMXXRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVD--EHREPQL 236
Query: 726 LVRWAIPQLHDIDALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDL 785
L+ + + +D ++ + S+ + S+C+ + RP + +V Q L
Sbjct: 237 LLDIKEEIEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 295
Query: 786 VDM 788
+M
Sbjct: 296 QEM 298
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 142/300 (47%), Gaps = 16/300 (5%)
Query: 494 TTARSFTIASLQQYTNSFSQE------NLIGAGMLGSVYRAQLPDGKLLAVKKLDKRA-- 545
T SF+ L+ TN+F + N G G G VY+ + + +AVKKL
Sbjct: 1 TRFHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDI 59
Query: 546 SSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELK 605
++++ +F + + + +H N+VEL G+ ++ L+Y Y NG+L D L D
Sbjct: 60 TTEELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTP 119
Query: 606 NNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS 665
LSW+ R ++A GAA + +LHE +HR+ KSANI +SD GLA
Sbjct: 120 P-LSWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASE 175
Query: 666 SGSVSQLSGHLLTAYGYGAPEFESGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQF 725
+ ++ Y APE G T +SD+YSFGVV+LE++TG + D +R Q
Sbjct: 176 KFAQXVXXSRIVGTTAYXAPEALRGEITPKSDIYSFGVVLLEIITGLPAVD--EHREPQL 233
Query: 726 LVRWAIPQLHDIDALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDL 785
L+ + + +D + + S+ + S+C+ + RP + +V Q L
Sbjct: 234 LLDIKEEIEDEEKTIEDYIDKKXNDA-DSTSVEAXYSVASQCLHEKKNKRPDIKKVQQLL 292
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/275 (31%), Positives = 129/275 (46%), Gaps = 22/275 (8%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
IGAG G+V+RA+ G +AVK L ++ ++ +EFL V + R+RH NIV G
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ ++ EY S G+L +LH + L R+ MA A+ + YLH PPIV
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGA-REQLDERRRLSMAYDVAKGMNYLHN-RNPPIV 161
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FESGIYTCQ 695
HRN KS N+ V V D GL+ L +S +S S + APE +
Sbjct: 162 HRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSA--AGTPEWMAPEVLRDEPSNEK 219
Query: 696 SDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSLSGQYPAK 755
SDVYSFGV++ EL T ++ + V + +L + R ++P +
Sbjct: 220 SDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLE----IPRNLNPQV------- 268
Query: 756 SLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIR 790
A II C +EP RP + ++ L +I+
Sbjct: 269 -----AAIIEGCWTNEPWKRPSFATIMDLLRPLIK 298
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 137/282 (48%), Gaps = 33/282 (11%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
IG+G G+VY+ + +AVK L+ A + Q+ F V + + RH NI+ GY
Sbjct: 20 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 77
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ Q ++ ++C +L LH+ + I +A AR ++YLH I+
Sbjct: 78 TK-PQLAIVTQWCEGSSLYHHLHASE---TKFEMKKLIDIARQTARGMDYLHA---KSII 130
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLIS--SGS--VSQLSGHLLTAYGYGAPEF----E 688
HR+ KS NI V + D GLA + S SGS QLSG +L + APE +
Sbjct: 131 HRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSIL----WMAPEVIRMQD 186
Query: 689 SGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSL 748
S Y+ QSDVY+FG+V+ EL+TG+ Y NR + I ++ +LS P L
Sbjct: 187 SNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ-------IIEMVGRGSLS----PDL 235
Query: 749 SGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIR 790
S + + +++ C++ + + RP ++ ++ ++ R
Sbjct: 236 S-KVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 276
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 129/280 (46%), Gaps = 32/280 (11%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
IGAG G+V+RA+ G +AVK L ++ ++ +EFL V + R+RH NIV G
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ ++ EY S G+L +LH + L R+ MA A+ + YLH PPIV
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGA-REQLDERRRLSMAYDVAKGMNYLHN-RNPPIV 161
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESGIY---- 692
HR+ KS N+ V V D GL+ L + S L + G PE+ +
Sbjct: 162 HRDLKSPNLLVDKKYTVKVCDFGLSRL-------KASXFLXSKXAAGTPEWMAPEVLRDE 214
Query: 693 --TCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSLSG 750
+SDVYSFGV++ EL T ++ + V + +L + R ++P +
Sbjct: 215 PSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLE----IPRNLNPQV-- 268
Query: 751 QYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIR 790
A II C +EP RP + ++ L +I+
Sbjct: 269 ----------AAIIEGCWTNEPWKRPSFATIMDLLRPLIK 298
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 136/282 (48%), Gaps = 33/282 (11%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
IG+G G+VY+ + +AVK L+ A + Q+ F V + + RH NI+ GY
Sbjct: 32 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ Q ++ ++C +L LH+ + I +A AR ++YLH I+
Sbjct: 90 TK-PQLAIVTQWCEGSSLYHHLHASE---TKFEMKKLIDIARQTARGMDYLHA---KSII 142
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLIS--SGS--VSQLSGHLLTAYGYGAPEF----E 688
HR+ KS NI V + D GLA S SGS QLSG +L + APE +
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSIL----WMAPEVIRMQD 198
Query: 689 SGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSL 748
S Y+ QSDVY+FG+V+ EL+TG+ Y NR + I ++ +LS P L
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ-------IIEMVGRGSLS----PDL 247
Query: 749 SGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIR 790
S + + +++ C++ + + RP ++ ++ ++ R
Sbjct: 248 S-KVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 135/282 (47%), Gaps = 33/282 (11%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
IG+G G+VY+ + +AVK L+ A + Q+ F V + + RH NI+ GY
Sbjct: 32 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
Q ++ ++C +L LH+ + I +A AR ++YLH I+
Sbjct: 90 TA-PQLAIVTQWCEGSSLYHHLHASE---TKFEMKKLIDIARQTARGMDYLHA---KSII 142
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLIS--SGS--VSQLSGHLLTAYGYGAPEF----E 688
HR+ KS NI V + D GLA S SGS QLSG +L + APE +
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSIL----WMAPEVIRMQD 198
Query: 689 SGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSL 748
S Y+ QSDVY+FG+V+ EL+TG+ Y NR + I ++ +LS P L
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ-------IIEMVGRGSLS----PDL 247
Query: 749 SGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIR 790
S + + +++ C++ + + RP ++ ++ ++ R
Sbjct: 248 S-KVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 130/281 (46%), Gaps = 31/281 (11%)
Query: 510 SFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
+F QE IG+G G V+ + +A+K + + + S+ D+F+E + ++ H +
Sbjct: 30 TFVQE--IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSE---DDFIEEAEVMMKLSHPKL 84
Query: 570 VELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
V+L G C E L++E+ +G L D L + L + T + M L + YL E
Sbjct: 85 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL---FAAETLLGMCLDVCEGMAYLEE 141
Query: 630 ICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FE 688
C ++HR+ + N + VSD G+ + + +G + +PE F
Sbjct: 142 AC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFS 197
Query: 689 SGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPS 747
Y+ +SDV+SFGV+M E+ + G+ Y+ NR +V DI R+ P
Sbjct: 198 FSRYSSKSDVWSFGVLMWEVFSEGKIPYE---NRSNSEVVE-------DISTGFRLYKPR 247
Query: 748 LSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDM 788
L+ +H I++ C + PE RP S +++ L ++
Sbjct: 248 LAS-------THVYQIMNHCWKERPEDRPAFSRLLRQLAEI 281
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 128/281 (45%), Gaps = 31/281 (11%)
Query: 510 SFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
+F QE IG+G G V+ + +A+K + + A S++ +F+E + ++ H +
Sbjct: 13 TFVQE--IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE---DFIEEAEVMMKLSHPKL 67
Query: 570 VELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
V+L G C E L++E+ +G L D L + L + T + M L + YL E
Sbjct: 68 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL---FAAETLLGMCLDVCEGMAYLEE 124
Query: 630 ICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FE 688
C ++HR+ + N + VSD G+ + + +G + +PE F
Sbjct: 125 AC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFS 180
Query: 689 SGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPS 747
Y+ +SDV+SFGV+M E+ + G+ Y+ N + DI R+ P
Sbjct: 181 FSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS----------EVVEDISTGFRLYKPR 230
Query: 748 LSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDM 788
L+ +H I++ C + PE RP S +++ L ++
Sbjct: 231 LAS-------THVYQIMNHCWRERPEDRPAFSRLLRQLAEI 264
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 130/281 (46%), Gaps = 31/281 (11%)
Query: 510 SFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
+F QE IG+G G V+ + +A+K + + A S++ +F+E + ++ H +
Sbjct: 8 TFVQE--IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE---DFIEEAEVMMKLSHPKL 62
Query: 570 VELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
V+L G C E L++E+ +G L D L + L + T + M L + YL E
Sbjct: 63 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL---FAAETLLGMCLDVCEGMAYLEE 119
Query: 630 ICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FE 688
C ++HR+ + N + VSD G+ + + +G + +PE F
Sbjct: 120 AC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFS 175
Query: 689 SGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPS 747
Y+ +SDV+SFGV+M E+ + G+ Y+ NR +V DI R+ P
Sbjct: 176 FSRYSSKSDVWSFGVLMWEVFSEGKIPYE---NRSNSEVV-------EDISTGFRLYKPR 225
Query: 748 LSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDM 788
L+ +H I++ C + PE RP S +++ L ++
Sbjct: 226 LAS-------THVYQIMNHCWKERPEDRPAFSRLLRQLAEI 259
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 130/281 (46%), Gaps = 31/281 (11%)
Query: 510 SFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
+F QE IG+G G V+ + +A+K + + A S++ +F+E + ++ H +
Sbjct: 10 TFVQE--IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE---DFIEEAEVMMKLSHPKL 64
Query: 570 VELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
V+L G C E L++E+ +G L D L + L + T + M L + YL E
Sbjct: 65 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL---FAAETLLGMCLDVCEGMAYLEE 121
Query: 630 ICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FE 688
C ++HR+ + N + VSD G+ + + +G + +PE F
Sbjct: 122 AC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFS 177
Query: 689 SGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPS 747
Y+ +SDV+SFGV+M E+ + G+ Y+ NR +V DI R+ P
Sbjct: 178 FSRYSSKSDVWSFGVLMWEVFSEGKIPYE---NRSNSEVV-------EDISTGFRLYKPR 227
Query: 748 LSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDM 788
L+ +H I++ C + PE RP S +++ L ++
Sbjct: 228 LAS-------THVYQIMNHCWKERPEDRPAFSRLLRQLAEI 261
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 108/215 (50%), Gaps = 21/215 (9%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
IG+G G+VY+ + +AVK L+ A + Q+ F V + + RH NI+ GY
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ Q ++ ++C +L LH ++ I +A A+ ++YLH I+
Sbjct: 74 TK-PQLAIVTQWCEGSSLYHHLHI---IETKFEMIKLIDIARQTAQGMDYLHA---KSII 126
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLIS--SGS--VSQLSGHLLTAYGYGAPEF----E 688
HR+ KS NI V + D GLA + S SGS QLSG +L + APE +
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL----WMAPEVIRMQD 182
Query: 689 SGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGE 723
Y+ QSDVY+FG+V+ EL+TG+ Y NR +
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 217
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 108/215 (50%), Gaps = 21/215 (9%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
IG+G G+VY+ + +AVK L+ A + Q+ F V + + RH NI+ GY
Sbjct: 21 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ Q ++ ++C +L LH ++ I +A A+ ++YLH I+
Sbjct: 79 TK-PQLAIVTQWCEGSSLYHHLHI---IETKFEMIKLIDIARQTAQGMDYLHA---KSII 131
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLIS--SGS--VSQLSGHLLTAYGYGAPEF----E 688
HR+ KS NI V + D GLA + S SGS QLSG +L + APE +
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL----WMAPEVIRMQD 187
Query: 689 SGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGE 723
Y+ QSDVY+FG+V+ EL+TG+ Y NR +
Sbjct: 188 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 222
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 108/215 (50%), Gaps = 21/215 (9%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
IG+G G+VY+ + +AVK L+ A + Q+ F V + + RH NI+ GY
Sbjct: 21 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ Q ++ ++C +L LH ++ I +A A+ ++YLH I+
Sbjct: 79 TK-PQLAIVTQWCEGSSLYHHLHI---IETKFEMIKLIDIARQTAQGMDYLHA---KSII 131
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLIS--SGS--VSQLSGHLLTAYGYGAPEF----E 688
HR+ KS NI V + D GLA + S SGS QLSG +L + APE +
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL----WMAPEVIRMQD 187
Query: 689 SGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGE 723
Y+ QSDVY+FG+V+ EL+TG+ Y NR +
Sbjct: 188 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 222
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 108/215 (50%), Gaps = 21/215 (9%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
IG+G G+VY+ + +AVK L+ A + Q+ F V + + RH NI+ GY
Sbjct: 18 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 75
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ Q ++ ++C +L LH ++ I +A A+ ++YLH I+
Sbjct: 76 TK-PQLAIVTQWCEGSSLYHHLHI---IETKFEMIKLIDIARQTAQGMDYLHA---KSII 128
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLIS--SGS--VSQLSGHLLTAYGYGAPEF----E 688
HR+ KS NI V + D GLA + S SGS QLSG +L + APE +
Sbjct: 129 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL----WMAPEVIRMQD 184
Query: 689 SGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGE 723
Y+ QSDVY+FG+V+ EL+TG+ Y NR +
Sbjct: 185 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 219
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 108/215 (50%), Gaps = 21/215 (9%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
IG+G G+VY+ + +AVK L+ A + Q+ F V + + RH NI+ GY
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ Q ++ ++C +L LH ++ I +A A+ ++YLH I+
Sbjct: 102 TK-PQLAIVTQWCEGSSLYHHLHI---IETKFEMIKLIDIARQTAQGMDYLHA---KSII 154
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLIS--SGS--VSQLSGHLLTAYGYGAPEF----E 688
HR+ KS NI V + D GLA + S SGS QLSG +L + APE +
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL----WMAPEVIRMQD 210
Query: 689 SGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGE 723
Y+ QSDVY+FG+V+ EL+TG+ Y NR +
Sbjct: 211 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 245
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 108/215 (50%), Gaps = 21/215 (9%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
IG+G G+VY+ + +AVK L+ A + Q+ F V + + RH NI+ GY
Sbjct: 43 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 100
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ Q ++ ++C +L LH ++ I +A A+ ++YLH I+
Sbjct: 101 TK-PQLAIVTQWCEGSSLYHHLHI---IETKFEMIKLIDIARQTAQGMDYLHA---KSII 153
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLIS--SGS--VSQLSGHLLTAYGYGAPEF----E 688
HR+ KS NI V + D GLA + S SGS QLSG +L + APE +
Sbjct: 154 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL----WMAPEVIRMQD 209
Query: 689 SGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGE 723
Y+ QSDVY+FG+V+ EL+TG+ Y NR +
Sbjct: 210 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 244
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 107/215 (49%), Gaps = 21/215 (9%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
IG+G G+VY+ + +AVK L+ A + Q+ F V + + RH NI+ GY
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
Q ++ ++C +L LH ++ I +A A+ ++YLH I+
Sbjct: 74 TA-PQLAIVTQWCEGSSLYHHLHI---IETKFEMIKLIDIARQTAQGMDYLHA---KSII 126
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLIS--SGS--VSQLSGHLLTAYGYGAPEF----E 688
HR+ KS NI V + D GLA + S SGS QLSG +L + APE +
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL----WMAPEVIRMQD 182
Query: 689 SGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGE 723
Y+ QSDVY+FG+V+ EL+TG+ Y NR +
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 217
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 136/295 (46%), Gaps = 44/295 (14%)
Query: 514 ENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELK 573
E ++G G G V +A+ K +A+K+++ S+ + F+ + + R+ H NIV+L
Sbjct: 14 EEVVGRGAFGVVCKAKW-RAKDVAIKQIE----SESERKAFIVELRQLSRVNHPNIVKLY 68
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDEL-----KNNLSWNTRIRMALGAARALEYLH 628
G C L+ EY G+L ++LH + L + +SW L ++ + YLH
Sbjct: 69 GACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW------CLQCSQGVAYLH 120
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYG---YGAP 685
+ ++HR+ K N+ + V+ + + G+ + H+ G + AP
Sbjct: 121 SMQPKALIHRDLKPPNL-------LLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAP 173
Query: 686 E-FESGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMV 744
E FE Y+ + DV+S+G+++ E++T RK +D G F + WA+
Sbjct: 174 EVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEI--GGPAFRIMWAV---------HNGT 222
Query: 745 DPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIRRERCSNESL 799
P L P +++RC +P RP M E+V+ + ++R ++E L
Sbjct: 223 RPPLIKNLPKP----IESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADEPL 273
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 129/281 (45%), Gaps = 31/281 (11%)
Query: 510 SFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
+F QE IG+G G V+ + +A+K + + A S++ +F+E + ++ H +
Sbjct: 11 TFVQE--IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE---DFIEEAEVMMKLSHPKL 65
Query: 570 VELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
V+L G C E L+ E+ +G L D L + L + T + M L + YL E
Sbjct: 66 VQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGL---FAAETLLGMCLDVCEGMAYLEE 122
Query: 630 ICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FE 688
C ++HR+ + N + VSD G+ + + +G + +PE F
Sbjct: 123 AC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFS 178
Query: 689 SGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPS 747
Y+ +SDV+SFGV+M E+ + G+ Y+ NR +V DI R+ P
Sbjct: 179 FSRYSSKSDVWSFGVLMWEVFSEGKIPYE---NRSNSEVV-------EDISTGFRLYKPR 228
Query: 748 LSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDM 788
L+ +H I++ C + PE RP S +++ L ++
Sbjct: 229 LAS-------THVYQIMNHCWRERPEDRPAFSRLLRQLAEI 262
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 136/295 (46%), Gaps = 44/295 (14%)
Query: 514 ENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELK 573
E ++G G G V +A+ K +A+K+++ S+ + F+ + + R+ H NIV+L
Sbjct: 13 EEVVGRGAFGVVCKAKW-RAKDVAIKQIE----SESERKAFIVELRQLSRVNHPNIVKLY 67
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDEL-----KNNLSWNTRIRMALGAARALEYLH 628
G C L+ EY G+L ++LH + L + +SW L ++ + YLH
Sbjct: 68 GACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW------CLQCSQGVAYLH 119
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYG---YGAP 685
+ ++HR+ K N+ + V+ + + G+ + H+ G + AP
Sbjct: 120 SMQPKALIHRDLKPPNL-------LLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAP 172
Query: 686 E-FESGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMV 744
E FE Y+ + DV+S+G+++ E++T RK +D G F + WA+
Sbjct: 173 EVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEI--GGPAFRIMWAV---------HNGT 221
Query: 745 DPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIRRERCSNESL 799
P L P +++RC +P RP M E+V+ + ++R ++E L
Sbjct: 222 RPPLIKNLPKP----IESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADEPL 272
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 107/215 (49%), Gaps = 21/215 (9%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
IG+G G+VY+ + +AVK L+ A + Q+ F V + + RH NI+ GY
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ Q ++ ++C +L LH ++ I +A A+ ++YLH I+
Sbjct: 74 TK-PQLAIVTQWCEGSSLYHHLHI---IETKFEMIKLIDIARQTAQGMDYLHA---KSII 126
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLIS--SGS--VSQLSGHLLTAYGYGAPEF----E 688
HR+ KS NI V + D GLA S SGS QLSG +L + APE +
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSIL----WMAPEVIRMQD 182
Query: 689 SGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGE 723
Y+ QSDVY+FG+V+ EL+TG+ Y NR +
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 217
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 107/215 (49%), Gaps = 21/215 (9%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
IG+G G+VY+ + +AVK L+ A + Q+ F V + + RH NI+ GY
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ Q ++ ++C +L LH ++ I +A A+ ++YLH I+
Sbjct: 102 TK-PQLAIVTQWCEGSSLYHHLHI---IETKFEMIKLIDIARQTAQGMDYLHA---KSII 154
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLIS--SGS--VSQLSGHLLTAYGYGAPEF----E 688
HR+ KS NI V + D GLA S SGS QLSG +L + APE +
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSIL----WMAPEVIRMQD 210
Query: 689 SGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGE 723
Y+ QSDVY+FG+V+ EL+TG+ Y NR +
Sbjct: 211 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 245
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 107/215 (49%), Gaps = 21/215 (9%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
IG+G G+VY+ + +AVK L+ A + Q+ F V + + RH NI+ GY
Sbjct: 36 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 93
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ Q ++ ++C +L LH ++ I +A A+ ++YLH I+
Sbjct: 94 TK-PQLAIVTQWCEGSSLYHHLHI---IETKFEMIKLIDIARQTAQGMDYLHA---KSII 146
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLIS--SGS--VSQLSGHLLTAYGYGAPEF----E 688
HR+ KS NI V + D GLA S SGS QLSG +L + APE +
Sbjct: 147 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSIL----WMAPEVIRMQD 202
Query: 689 SGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGE 723
Y+ QSDVY+FG+V+ EL+TG+ Y NR +
Sbjct: 203 KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 237
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 127/278 (45%), Gaps = 31/278 (11%)
Query: 510 SFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
+F QE IG+G G V+ + +A+K + + A S++ +F+E + ++ H +
Sbjct: 10 TFVQE--IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE---DFIEEAEVMMKLSHPKL 64
Query: 570 VELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
V+L G C E L++E+ +G L D L + L + T + M L + YL E
Sbjct: 65 VQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL---FAAETLLGMCLDVCEGMAYLEE 121
Query: 630 ICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FE 688
++HR+ + N + VSD G+ + + +G + +PE F
Sbjct: 122 ---ASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFS 177
Query: 689 SGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPS 747
Y+ +SDV+SFGV+M E+ + G+ Y+ NR +V DI R+ P
Sbjct: 178 FSRYSSKSDVWSFGVLMWEVFSEGKIPYE---NRSNSEVV-------EDISTGFRLYKPR 227
Query: 748 LSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDL 785
L+ +H I++ C + PE RP S +++ L
Sbjct: 228 LAS-------THVYQIMNHCWKERPEDRPAFSRLLRQL 258
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 136/310 (43%), Gaps = 44/310 (14%)
Query: 493 FTTARSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQL-PDGKLLAVKKL---DKRASSQ 548
F +R T+A N E IG G G V++ +L D ++A+K L D ++
Sbjct: 8 FPKSRLPTLAD-----NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETE 62
Query: 549 --QKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKN 606
+K EF V + + H NIV+L G H ++ E+ G D+ H + +
Sbjct: 63 MIEKFQEFQREVFIMSNLNHPNIVKLYGLM--HNPPRMVMEFVPCG---DLYHRLLDKAH 117
Query: 607 NLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXX-----XAVSVSDCGLA 661
+ W+ ++R+ L A +EY+ PPIVHR+ +S NI V+D GL
Sbjct: 118 PIKWSVKLRLMLDIALGIEYMQN-QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGL- 175
Query: 662 PLISSGSVSQLSGHLLTAYGYGAPEF---ESGIYTCQSDVYSFGVVMLELLTGRKSYDRT 718
S SV +SG LL + + APE E YT ++D YSF +++ +LTG +D
Sbjct: 176 ---SQQSVHSVSG-LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEY 231
Query: 719 RNRGEQFLVRWAIPQLHDIDALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPM 778
I ++ + + L P ++I C +P+ RP
Sbjct: 232 --------------SYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHF 277
Query: 779 SEVVQDLVDM 788
S +V++L ++
Sbjct: 278 SYIVKELSEL 287
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 128/294 (43%), Gaps = 47/294 (15%)
Query: 511 FSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDR------- 563
+ E +IG G G VYRA G +AVK A+ D++ + + N+ +
Sbjct: 9 LTLEEIIGIGGFGKVYRA-FWIGDEVAVK-----AARHDPDEDISQTIENVRQEAKLFAM 62
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
++H NI+ L+G C + L+ E+ G L +L + + + A+ AR
Sbjct: 63 LKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSG-----KRIPPDILVNWAVQIARG 117
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXX--------AVSVSDCGLAPLISSGSVSQLSGH 675
+ YLH+ PI+HR+ KS+NI + ++D GLA + +G
Sbjct: 118 MNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAG- 176
Query: 676 LLTAYGYGAPE-FESGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQL 734
AY + APE + +++ SDV+S+GV++ ELLTG + + V
Sbjct: 177 ---AYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGV------- 226
Query: 735 HDIDALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDM 788
A++++ P P+ FA ++ C +P RP + ++ L +
Sbjct: 227 ----AMNKLALP-----IPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 135/310 (43%), Gaps = 44/310 (14%)
Query: 493 FTTARSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQL-PDGKLLAVKKL---DKRASSQ 548
F +R T+A N E IG G G V++ +L D ++A+K L D ++
Sbjct: 8 FPKSRLPTLAD-----NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETE 62
Query: 549 --QKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKN 606
+K EF V + + H NIV+L G H ++ E+ G D+ H + +
Sbjct: 63 MIEKFQEFQREVFIMSNLNHPNIVKLYGLM--HNPPRMVMEFVPCG---DLYHRLLDKAH 117
Query: 607 NLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXX-----XAVSVSDCGLA 661
+ W+ ++R+ L A +EY+ PPIVHR+ +S NI V+D G
Sbjct: 118 PIKWSVKLRLMLDIALGIEYMQN-QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG-- 174
Query: 662 PLISSGSVSQLSGHLLTAYGYGAPEF---ESGIYTCQSDVYSFGVVMLELLTGRKSYDRT 718
S SV +SG LL + + APE E YT ++D YSF +++ +LTG +D
Sbjct: 175 --TSQQSVHSVSG-LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEY 231
Query: 719 RNRGEQFLVRWAIPQLHDIDALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPM 778
I ++ + + L P ++I C +P+ RP
Sbjct: 232 --------------SYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHF 277
Query: 779 SEVVQDLVDM 788
S +V++L ++
Sbjct: 278 SYIVKELSEL 287
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 135/310 (43%), Gaps = 44/310 (14%)
Query: 493 FTTARSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQL-PDGKLLAVKKL---DKRASSQ 548
F +R T+A N E IG G G V++ +L D ++A+K L D ++
Sbjct: 8 FPKSRLPTLAD-----NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETE 62
Query: 549 --QKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKN 606
+K EF V + + H NIV+L G H ++ E+ G D+ H + +
Sbjct: 63 MIEKFQEFQREVFIMSNLNHPNIVKLYGLM--HNPPRMVMEFVPCG---DLYHRLLDKAH 117
Query: 607 NLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXX-----XAVSVSDCGLA 661
+ W+ ++R+ L A +EY+ PPIVHR+ +S NI V+D L
Sbjct: 118 PIKWSVKLRLMLDIALGIEYMQN-QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSL- 175
Query: 662 PLISSGSVSQLSGHLLTAYGYGAPEF---ESGIYTCQSDVYSFGVVMLELLTGRKSYDRT 718
S SV +SG LL + + APE E YT ++D YSF +++ +LTG +D
Sbjct: 176 ---SQQSVHSVSG-LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEY 231
Query: 719 RNRGEQFLVRWAIPQLHDIDALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPM 778
I ++ + + L P ++I C +P+ RP
Sbjct: 232 --------------SYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHF 277
Query: 779 SEVVQDLVDM 788
S +V++L ++
Sbjct: 278 SYIVKELSEL 287
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 13/211 (6%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
IG+G G+VY+ + +AVK L + ++ F V + + RH NI+ GY
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYM 101
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ ++ ++C +L LH + I +A A+ ++YLH I+
Sbjct: 102 TK-DNLAIVTQWCEGSSLYKHLHVQE---TKFQMFQLIDIARQTAQGMDYLHA---KNII 154
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEF----ESGIY 692
HR+ KS NI V + D GLA + S S SQ + + APE ++ +
Sbjct: 155 HRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPF 214
Query: 693 TCQSDVYSFGVVMLELLTGRKSYDRTRNRGE 723
+ QSDVYS+G+V+ EL+TG Y NR +
Sbjct: 215 SFQSDVYSYGIVLYELMTGELPYSHINNRDQ 245
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 125/281 (44%), Gaps = 30/281 (10%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
S E +GAG G V+ A +AVK + + S + FL N + ++H
Sbjct: 15 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA---FLAEANVMKTLQHDK 71
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
+V+L + +I E+ + G+L D L SD+ K L ++ +A+ E +
Sbjct: 72 LVKLHAVVTKEPI-YIITEFMAKGSLLDFLKSDEGSKQPLP-----KLIDFSAQIAEGMA 125
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-F 687
I Q +HR+ ++ANI ++D GLA +I + G + APE
Sbjct: 126 FIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPI-KWTAPEAI 184
Query: 688 ESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDP 746
G +T +SDV+SFG++++E++T GR Y N P++ I AL R
Sbjct: 185 NFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN-----------PEV--IRALER---- 227
Query: 747 SLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVD 787
P +I+ RC ++ PE RP E +Q ++D
Sbjct: 228 GYRMPRPENCPEELYNIMMRCWKNRPEERPTF-EYIQSVLD 267
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 126/289 (43%), Gaps = 36/289 (12%)
Query: 512 SQENLIGAGMLGSVYRAQLP--DGKL---LAVKKLDKRASSQQKDDEFLELVNNIDRIRH 566
+++ +IGAG G VY+ L GK +A+K L + +Q+ D FL + + H
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVD-FLGEAGIMGQFSH 105
Query: 567 ANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEY 626
NI+ L+G +++ ++I EY NG L L D S + M G A ++Y
Sbjct: 106 HNIIRLEGVISKYKPMMIITEYMENGALDKFLREKD---GEFSVLQLVGMLRGIAAGMKY 162
Query: 627 LHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS---SGSVSQLSGHLLTAYGYG 683
L + VHR+ + NI VSD GL+ ++ + + G + +
Sbjct: 163 LANMNY---VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKI--PIRWT 217
Query: 684 APE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALS 741
APE +T SDV+SFG+VM E++T G + Y N H++
Sbjct: 218 APEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN--------------HEV---M 260
Query: 742 RMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIR 790
+ ++ P S ++ +C Q E RP +++V L +IR
Sbjct: 261 KAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIR 309
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 119/276 (43%), Gaps = 31/276 (11%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
+GAG G V+ +AVK L + + S D FL N + +++H +V L
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS---PDAFLAEANLMKQLQHQRLVRLYAVV 73
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ +I EY NG+L D L + +K L+ N + MA A + ++ E +
Sbjct: 74 TQE-PIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEE---RNYI 127
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FESGIYTCQ 695
HRN ++ANI + ++D GLA LI + G + APE G +T +
Sbjct: 128 HRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAINYGTFTIK 186
Query: 696 SDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQ-LHDIDALSRMVDPSLSGQYP 753
SDV+SFG+++ E++T GR Y N P+ + +++ RMV P
Sbjct: 187 SDVWSFGILLTEIVTHGRIPYPGMTN-----------PEVIQNLERGYRMVRPD------ 229
Query: 754 AKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMI 789
++ C + PE RP + L D
Sbjct: 230 -NCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 264
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 125/281 (44%), Gaps = 30/281 (10%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
S E +GAG G V+ A +AVK + + S + FL N + ++H
Sbjct: 188 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA---FLAEANVMKTLQHDK 244
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
+V+L + +I E+ + G+L D L SD+ K L ++ +A+ E +
Sbjct: 245 LVKLHAVVTKE-PIYIITEFMAKGSLLDFLKSDEGSKQPLP-----KLIDFSAQIAEGMA 298
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-F 687
I Q +HR+ ++ANI ++D GLA +I + G + APE
Sbjct: 299 FIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPI-KWTAPEAI 357
Query: 688 ESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDP 746
G +T +SDV+SFG++++E++T GR Y N P++ I AL R
Sbjct: 358 NFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN-----------PEV--IRALER---- 400
Query: 747 SLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVD 787
P +I+ RC ++ PE RP E +Q ++D
Sbjct: 401 GYRMPRPENCPEELYNIMMRCWKNRPEERPTF-EYIQSVLD 440
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 116/263 (44%), Gaps = 31/263 (11%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
+GAG G V+ +AVK L + + S D FL N + +++H +V L
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS---PDAFLAEANLMKQLQHQRLVRLYAVV 86
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ +I EY NG+L D L + +K L+ N + MA A + ++ E +
Sbjct: 87 TQE-PIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEERN---YI 140
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FESGIYTCQ 695
HR+ ++ANI + ++D GLA LI + G + APE G +T +
Sbjct: 141 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYGTFTIK 199
Query: 696 SDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQ-LHDIDALSRMVDPSLSGQYP 753
SDV+SFG+++ E++T GR Y N P+ + +++ RMV P
Sbjct: 200 SDVWSFGILLTEIVTHGRIPYPGMTN-----------PEVIQNLERGYRMVRPD------ 242
Query: 754 AKSLSHFADIISRCVQSEPEFRP 776
++ C + PE RP
Sbjct: 243 -NCPEELYQLMRLCWKERPEDRP 264
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 116/263 (44%), Gaps = 31/263 (11%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
+GAG G V+ +AVK L + + S D FL N + +++H +V L
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS---PDAFLAEANLMKQLQHQRLVRLYAVV 85
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ +I EY NG+L D L + +K L+ N + MA A + ++ E +
Sbjct: 86 TQE-PIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEERN---YI 139
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FESGIYTCQ 695
HR+ ++ANI + ++D GLA LI + G + APE G +T +
Sbjct: 140 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYGTFTIK 198
Query: 696 SDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQ-LHDIDALSRMVDPSLSGQYP 753
SDV+SFG+++ E++T GR Y N P+ + +++ RMV P
Sbjct: 199 SDVWSFGILLTEIVTHGRIPYPGMTN-----------PEVIQNLERGYRMVRPD------ 241
Query: 754 AKSLSHFADIISRCVQSEPEFRP 776
++ C + PE RP
Sbjct: 242 -NCPEELYQLMRLCWKERPEDRP 263
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 116/263 (44%), Gaps = 31/263 (11%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
+GAG G V+ +AVK L + + S D FL N + +++H +V L
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS---PDAFLAEANLMKQLQHQRLVRLYAVV 83
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ +I EY NG+L D L + +K L+ N + MA A + ++ E +
Sbjct: 84 TQE-PIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEERN---YI 137
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FESGIYTCQ 695
HR+ ++ANI + ++D GLA LI + G + APE G +T +
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYGTFTIK 196
Query: 696 SDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQ-LHDIDALSRMVDPSLSGQYP 753
SDV+SFG+++ E++T GR Y N P+ + +++ RMV P
Sbjct: 197 SDVWSFGILLTEIVTHGRIPYPGMTN-----------PEVIQNLERGYRMVRPD------ 239
Query: 754 AKSLSHFADIISRCVQSEPEFRP 776
++ C + PE RP
Sbjct: 240 -NCPEELYQLMRLCWKERPEDRP 261
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 116/263 (44%), Gaps = 31/263 (11%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
+GAG G V+ +AVK L + + S D FL N + +++H +V L
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS---PDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ +I EY NG+L D L + +K L+ N + MA A + ++ E +
Sbjct: 78 TQE-PIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEERN---YI 131
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FESGIYTCQ 695
HR+ ++ANI + ++D GLA LI + G + APE G +T +
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYGTFTIK 190
Query: 696 SDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQ-LHDIDALSRMVDPSLSGQYP 753
SDV+SFG+++ E++T GR Y N P+ + +++ RMV P
Sbjct: 191 SDVWSFGILLTEIVTHGRIPYPGMTN-----------PEVIQNLERGYRMVRPD------ 233
Query: 754 AKSLSHFADIISRCVQSEPEFRP 776
++ C + PE RP
Sbjct: 234 -NCPEELYQLMRLCWKERPEDRP 255
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 116/263 (44%), Gaps = 31/263 (11%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
+GAG G V+ +AVK L + + S D FL N + +++H +V L
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS---PDAFLAEANLMKQLQHQRLVRLYAVV 87
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ +I EY NG+L D L + +K L+ N + MA A + ++ E +
Sbjct: 88 TQE-PIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEERN---YI 141
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FESGIYTCQ 695
HR+ ++ANI + ++D GLA LI + G + APE G +T +
Sbjct: 142 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAINYGTFTIK 200
Query: 696 SDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQ-LHDIDALSRMVDPSLSGQYP 753
SDV+SFG+++ E++T GR Y N P+ + +++ RMV P
Sbjct: 201 SDVWSFGILLTEIVTHGRIPYPGMTN-----------PEVIQNLERGYRMVRPD------ 243
Query: 754 AKSLSHFADIISRCVQSEPEFRP 776
++ C + PE RP
Sbjct: 244 -NCPEELYQLMRLCWKERPEDRP 265
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 116/263 (44%), Gaps = 31/263 (11%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
+GAG G V+ +AVK L + + S D FL N + +++H +V L
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS---PDAFLAEANLMKQLQHQRLVRLYAVV 83
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ +I EY NG+L D L + +K L+ N + MA A + ++ E +
Sbjct: 84 TQEPI-YIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEE---RNYI 137
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FESGIYTCQ 695
HR+ ++ANI + ++D GLA LI + G + APE G +T +
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAINYGTFTIK 196
Query: 696 SDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQ-LHDIDALSRMVDPSLSGQYP 753
SDV+SFG+++ E++T GR Y N P+ + +++ RMV P
Sbjct: 197 SDVWSFGILLTEIVTHGRIPYPGMTN-----------PEVIQNLERGYRMVRPD------ 239
Query: 754 AKSLSHFADIISRCVQSEPEFRP 776
++ C + PE RP
Sbjct: 240 -NCPEELYQLMRLCWKERPEDRP 261
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 116/263 (44%), Gaps = 31/263 (11%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
+GAG G V+ +AVK L + + S D FL N + +++H +V L
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS---PDAFLAEANLMKQLQHQRLVRLYAVV 79
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ +I EY NG+L D L + +K L+ N + MA A + ++ E +
Sbjct: 80 TQE-PIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEE---RNYI 133
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FESGIYTCQ 695
HR+ ++ANI + ++D GLA LI + G + APE G +T +
Sbjct: 134 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYGTFTIK 192
Query: 696 SDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQ-LHDIDALSRMVDPSLSGQYP 753
SDV+SFG+++ E++T GR Y N P+ + +++ RMV P
Sbjct: 193 SDVWSFGILLTEIVTHGRIPYPGMTN-----------PEVIQNLERGYRMVRPD------ 235
Query: 754 AKSLSHFADIISRCVQSEPEFRP 776
++ C + PE RP
Sbjct: 236 -NCPEELYQLMRLCWKERPEDRP 257
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 116/263 (44%), Gaps = 31/263 (11%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
+GAG G V+ +AVK L + + S D FL N + +++H +V L
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS---PDAFLAEANLMKQLQHQRLVRLYAVV 82
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ +I EY NG+L D L + +K L+ N + MA A + ++ E +
Sbjct: 83 TQE-PIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEE---RNYI 136
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FESGIYTCQ 695
HR+ ++ANI + ++D GLA LI + G + APE G +T +
Sbjct: 137 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAINYGTFTIK 195
Query: 696 SDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQ-LHDIDALSRMVDPSLSGQYP 753
SDV+SFG+++ E++T GR Y N P+ + +++ RMV P
Sbjct: 196 SDVWSFGILLTEIVTHGRIPYPGMTN-----------PEVIQNLERGYRMVRPD------ 238
Query: 754 AKSLSHFADIISRCVQSEPEFRP 776
++ C + PE RP
Sbjct: 239 -NCPEELYQLMRLCWKERPEDRP 260
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 116/263 (44%), Gaps = 31/263 (11%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
+GAG G V+ +AVK L + + S D FL N + +++H +V L
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS---PDAFLAEANLMKQLQHQRLVRLYAVV 78
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ +I EY NG+L D L + +K L+ N + MA A + ++ E +
Sbjct: 79 TQE-PIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEE---RNYI 132
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FESGIYTCQ 695
HR+ ++ANI + ++D GLA LI + G + APE G +T +
Sbjct: 133 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYGTFTIK 191
Query: 696 SDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQ-LHDIDALSRMVDPSLSGQYP 753
SDV+SFG+++ E++T GR Y N P+ + +++ RMV P
Sbjct: 192 SDVWSFGILLTEIVTHGRIPYPGMTN-----------PEVIQNLERGYRMVRPD------ 234
Query: 754 AKSLSHFADIISRCVQSEPEFRP 776
++ C + PE RP
Sbjct: 235 -NCPEELYQLMRLCWKERPEDRP 256
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 116/263 (44%), Gaps = 31/263 (11%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
+GAG G V+ +AVK L + + S D FL N + +++H +V L
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS---PDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ +I EY NG+L D L + +K L+ N + MA A + ++ E +
Sbjct: 78 TQE-PIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEE---RNYI 131
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FESGIYTCQ 695
HR+ ++ANI + ++D GLA LI + G + APE G +T +
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAINYGTFTIK 190
Query: 696 SDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQ-LHDIDALSRMVDPSLSGQYP 753
SDV+SFG+++ E++T GR Y N P+ + +++ RMV P
Sbjct: 191 SDVWSFGILLTEIVTHGRIPYPGMTN-----------PEVIQNLERGYRMVRPD------ 233
Query: 754 AKSLSHFADIISRCVQSEPEFRP 776
++ C + PE RP
Sbjct: 234 -NCPEELYQLMRLCWKERPEDRP 255
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 116/263 (44%), Gaps = 31/263 (11%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
+GAG G V+ +AVK L + + S D FL N + +++H +V L
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS---PDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ +I EY NG+L D L + +K L+ N + MA A + ++ E +
Sbjct: 78 TQE-PIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEE---RNYI 131
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FESGIYTCQ 695
HR+ ++ANI + ++D GLA LI + G + APE G +T +
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI-KWTAPEAINYGTFTIK 190
Query: 696 SDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQ-LHDIDALSRMVDPSLSGQYP 753
SDV+SFG+++ E++T GR Y N P+ + +++ RMV P
Sbjct: 191 SDVWSFGILLTEIVTHGRIPYPGMTN-----------PEVIQNLERGYRMVRPD------ 233
Query: 754 AKSLSHFADIISRCVQSEPEFRP 776
++ C + PE RP
Sbjct: 234 -NCPEELYQLMRLCWKERPEDRP 255
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 116/263 (44%), Gaps = 31/263 (11%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
+GAG G V+ +AVK L + + S D FL N + +++H +V L
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGSMS---PDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ +I EY NG+L D L + +K L+ N + MA A + ++ E +
Sbjct: 78 TQE-PIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEERN---YI 131
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FESGIYTCQ 695
HR+ ++ANI + ++D GLA LI + G + APE G +T +
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPI-KWTAPEAINYGTFTIK 190
Query: 696 SDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQ-LHDIDALSRMVDPSLSGQYP 753
SDV+SFG+++ E++T GR Y N P+ + +++ RMV P
Sbjct: 191 SDVWSFGILLTEIVTHGRIPYPGMTN-----------PEVIQNLERGYRMVRPD------ 233
Query: 754 AKSLSHFADIISRCVQSEPEFRP 776
++ C + PE RP
Sbjct: 234 -NCPEELYQLMRLCWKERPEDRP 255
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 116/263 (44%), Gaps = 31/263 (11%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
+GAG G V+ +AVK L + + S D FL N + +++H +V L
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS---PDAFLAEANLMKQLQHQRLVRLYAVV 72
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ +I EY NG+L D L + +K L+ N + MA A + ++ E +
Sbjct: 73 TQE-PIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEE---RNYI 126
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FESGIYTCQ 695
HR+ ++ANI + ++D GLA LI + G + APE G +T +
Sbjct: 127 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI-KWTAPEAINYGTFTIK 185
Query: 696 SDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQ-LHDIDALSRMVDPSLSGQYP 753
SDV+SFG+++ E++T GR Y N P+ + +++ RMV P
Sbjct: 186 SDVWSFGILLTEIVTHGRIPYPGMTN-----------PEVIQNLERGYRMVRPD------ 228
Query: 754 AKSLSHFADIISRCVQSEPEFRP 776
++ C + PE RP
Sbjct: 229 -NCPEELYQLMRLCWKERPEDRP 250
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 106/232 (45%), Gaps = 36/232 (15%)
Query: 511 FSQENL-----IGAGMLGSVYRA------QLPDGKLLAVKKLDKRASSQQKDDEFLELVN 559
F +ENL +G+G G V A + +AVK L ++A S +++ EL
Sbjct: 42 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKM 101
Query: 560 NIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLH------SDDELK-------- 605
H NIV L G C G LI+EYC G L + L S+DE++
Sbjct: 102 MTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLE 161
Query: 606 -----NNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGL 660
N L++ + A A+ +E+L VHR+ + N+ V + D GL
Sbjct: 162 EEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKICDFGL 218
Query: 661 APLISSGSVSQLSGHLLTAYGYGAPE--FESGIYTCQSDVYSFGVVMLELLT 710
A I S S + G+ + APE FE GIYT +SDV+S+G+++ E+ +
Sbjct: 219 ARDIMSDSNYVVRGNARLPVKWMAPESLFE-GIYTIKSDVWSYGILLWEIFS 269
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 115/270 (42%), Gaps = 29/270 (10%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
S E +G G G V+ +A+K L S + FL+ + ++RH
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEK 74
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
+V+L +E ++I EY S G+L D L E+ L + MA A + Y+
Sbjct: 75 LVQLYAVVSEEPIYIVI-EYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFE 688
+ VHR+ ++ANI V+D GLA LI + G + APE
Sbjct: 132 RM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAA 187
Query: 689 -SGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDP 746
G +T +SDV+SFG+++ EL T GR Y NR L ++ RM P
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR----------EVLDQVERGYRM--P 235
Query: 747 SLSGQYPAKSLSHFADIISRCVQSEPEFRP 776
P + D++ +C + +PE RP
Sbjct: 236 C-----PPECPESLHDLMCQCWRKDPEERP 260
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 122/284 (42%), Gaps = 29/284 (10%)
Query: 517 IGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
+G G G VY L +AVK L + + +EFL+ + I+H N+V+L G
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGV 284
Query: 576 CAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPI 635
C +I E+ + G L D L + + +S + MA + A+EYL +
Sbjct: 285 CTREPPFYIITEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLE---KKNF 339
Query: 636 VHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FESGIYTC 694
+HRN + N V V+D GL+ L++ + + +G + APE ++
Sbjct: 340 IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSI 398
Query: 695 QSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSLSGQYP 753
+SDV++FGV++ E+ T G Y P + D+ + +++ + P
Sbjct: 399 KSDVWAFGVLLWEIATYGMSPY----------------PGI-DLSQVYELLEKDYRMERP 441
Query: 754 AKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIRRERCSNE 797
+++ C Q P RP +E+ Q M + S+E
Sbjct: 442 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDE 485
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 115/270 (42%), Gaps = 29/270 (10%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
S E +G G G V+ +A+K L S + FL+ + ++RH
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEK 74
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
+V+L +E ++I EY S G+L D L E+ L + MA A + Y+
Sbjct: 75 LVQLYAVVSEEPIYIVI-EYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFE 688
+ VHR+ ++ANI V+D GLA LI + G + APE
Sbjct: 132 RM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPI-KWTAPEAA 187
Query: 689 -SGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDP 746
G +T +SDV+SFG+++ EL T GR Y NR L ++ RM P
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR----------EVLDQVERGYRM--P 235
Query: 747 SLSGQYPAKSLSHFADIISRCVQSEPEFRP 776
P + D++ +C + +PE RP
Sbjct: 236 C-----PPECPESLHDLMCQCWRKDPEERP 260
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 114/270 (42%), Gaps = 29/270 (10%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
S E +G G G V+ +A+K L S + FL+ + +IRH
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMKKIRHEK 74
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
+V+L +E ++ EY S G+L D L E+ L + MA A + Y+
Sbjct: 75 LVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFE 688
+ VHR+ ++ANI V+D GLA LI + G + APE
Sbjct: 132 RM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAA 187
Query: 689 -SGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDP 746
G +T +SDV+SFG+++ EL T GR Y NR L ++ RM P
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR----------EVLDQVERGYRM--P 235
Query: 747 SLSGQYPAKSLSHFADIISRCVQSEPEFRP 776
P + D++ +C + +PE RP
Sbjct: 236 C-----PPECPESLHDLMCQCWRKDPEERP 260
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 125/288 (43%), Gaps = 37/288 (12%)
Query: 514 ENLIGAGMLGSVYRAQLP-DGK---LLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
E +IGAG G V L GK +A+K L + +Q+ D FL + + + H N+
Sbjct: 38 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRD-FLSEASIMGQFDHPNV 96
Query: 570 VELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
+ L+G + ++I E+ NG+L L +D + + M G A ++YL +
Sbjct: 97 IHLEGVVTKSTPVMIITEFMENGSLDSFLRQND---GQFTVIQLVGMLRGIAAGMKYLAD 153
Query: 630 ICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGS-----VSQLSGHLLTAYGYGA 684
+ VHR+ + NI VSD GL+ + + S L G + + A
Sbjct: 154 MN---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKI--PIRWTA 208
Query: 685 PE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSR 742
PE + +T SDV+S+G+VM E+++ G + Y W + I+A+ +
Sbjct: 209 PEAIQYRKFTSASDVWSYGIVMWEVMSYGERPY-------------WDMTNQDVINAIEQ 255
Query: 743 MVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIR 790
D L P S ++ C Q + RP ++V L MIR
Sbjct: 256 --DYRLPP--PMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIR 299
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 129/313 (41%), Gaps = 29/313 (9%)
Query: 488 KTAKPFTTARSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKL-LAVKKLDKRAS 546
K KP S + + ++ +G G G VY L +AVK L +
Sbjct: 196 KRNKPTVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE--- 252
Query: 547 SQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKN 606
+ +EFL+ + I+H N+V+L G C +I E+ + G L D L + +
Sbjct: 253 DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 312
Query: 607 NLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISS 666
N + MA + A+EYL + +HRN + N V V+D GL+ L++
Sbjct: 313 NAV--VLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTG 367
Query: 667 GSVSQLSGHLLTAYGYGAPE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQ 724
+ + +G + APE ++ +SDV++FGV++ E+ T G Y
Sbjct: 368 DTYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY--------- 417
Query: 725 FLVRWAIPQLHDIDALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQD 784
P + D+ + +++ + P +++ C Q P RP +E+ Q
Sbjct: 418 -------PGI-DLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQA 469
Query: 785 LVDMIRRERCSNE 797
M + S+E
Sbjct: 470 FETMFQESSISDE 482
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 129/313 (41%), Gaps = 29/313 (9%)
Query: 488 KTAKPFTTARSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKL-LAVKKLDKRAS 546
K KP S + + ++ +G G G VY L +AVK L +
Sbjct: 238 KRNKPTVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE--- 294
Query: 547 SQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKN 606
+ +EFL+ + I+H N+V+L G C +I E+ + G L D L + +
Sbjct: 295 DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV 354
Query: 607 NLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISS 666
N + MA + A+EYL + +HRN + N V V+D GL+ L++
Sbjct: 355 NAV--VLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTG 409
Query: 667 GSVSQLSGHLLTAYGYGAPE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQ 724
+ + +G + APE ++ +SDV++FGV++ E+ T G Y
Sbjct: 410 DTYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY--------- 459
Query: 725 FLVRWAIPQLHDIDALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQD 784
P + D+ + +++ + P +++ C Q P RP +E+ Q
Sbjct: 460 -------PGI-DLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQA 511
Query: 785 LVDMIRRERCSNE 797
M + S+E
Sbjct: 512 FETMFQESSISDE 524
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 113/270 (41%), Gaps = 29/270 (10%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
S E +G G G V+ +A+K L S + FL+ + ++RH
Sbjct: 8 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEK 64
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
+V+L +E ++ EY S G+L D L E L + MA A + Y+
Sbjct: 65 LVQLYAVVSEE-PIXIVTEYMSKGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYVE 121
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFE 688
+ VHR+ ++ANI V+D GLA LI + G + APE
Sbjct: 122 RM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPI-KWTAPEAA 177
Query: 689 -SGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDP 746
G +T +SDV+SFG+++ EL T GR Y NR L ++ RM P
Sbjct: 178 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR----------EVLDQVERGYRM--P 225
Query: 747 SLSGQYPAKSLSHFADIISRCVQSEPEFRP 776
P + D++ +C + EPE RP
Sbjct: 226 C-----PPECPESLHDLMCQCWRKEPEERP 250
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 114/270 (42%), Gaps = 29/270 (10%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
S E +G G G V+ +A+K L S + FL+ + ++RH
Sbjct: 9 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEK 65
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
+V+L +E ++ EY S G+L D L E+ L + MA A + Y+
Sbjct: 66 LVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVE 122
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFE 688
+ VHR+ ++ANI V+D GLA LI + G + APE
Sbjct: 123 RM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAA 178
Query: 689 -SGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDP 746
G +T +SDV+SFG+++ EL T GR Y NR L ++ RM P
Sbjct: 179 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR----------EVLDQVERGYRM--P 226
Query: 747 SLSGQYPAKSLSHFADIISRCVQSEPEFRP 776
P + D++ +C + +PE RP
Sbjct: 227 C-----PPECPESLHDLMCQCWRKDPEERP 251
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 135/317 (42%), Gaps = 56/317 (17%)
Query: 511 FSQENLI-----GAGMLGSVYRAQLPDGK------LLAVKKLDKRASSQQKDDEFLELVN 559
F ++NL+ G G G V +A K +AVK L + AS + D L N
Sbjct: 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRD-LLSEFN 78
Query: 560 NIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDEL--------------- 604
+ ++ H ++++L G C++ G LLI EY G+L+ L ++
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 605 -----KNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCG 659
+ L+ I A ++ ++YL E+ +VHR+ + NI + +SD G
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLAEMS---LVHRDLAARNILVAEGRKMKISDFG 195
Query: 660 LAPLI--SSGSVSQLSGHLLTAYGYGAPEFESGIYTCQSDVYSFGVVMLELLT-GRKSYD 716
L+ + V + G + + F+ IYT QSDV+SFGV++ E++T G Y
Sbjct: 196 LSRDVYEEDSXVKRSQGRIPVKWMAIESLFDH-IYTTQSDVWSFGVLLWEIVTLGGNPYP 254
Query: 717 RTRNRGEQFLVRWAIPQLHDIDALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRP 776
IP + L ++ + P ++ +C + EP+ RP
Sbjct: 255 -------------GIPP----ERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRP 297
Query: 777 PMSEVVQDLVDMIRRER 793
+++ +DL M+ + R
Sbjct: 298 VFADISKDLEKMMVKRR 314
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 113/270 (41%), Gaps = 29/270 (10%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
S E +G G G V+ +A+K L S + FL+ + ++RH
Sbjct: 11 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEK 67
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
+V+L +E ++ EY S G+L D L E L + MA A + Y+
Sbjct: 68 LVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYVE 124
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFE 688
+ VHR+ ++ANI V+D GLA LI + G + APE
Sbjct: 125 RM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAA 180
Query: 689 -SGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDP 746
G +T +SDV+SFG+++ EL T GR Y NR L ++ RM P
Sbjct: 181 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR----------EVLDQVERGYRM--P 228
Query: 747 SLSGQYPAKSLSHFADIISRCVQSEPEFRP 776
P + D++ +C + EPE RP
Sbjct: 229 C-----PPECPESLHDLMCQCWRKEPEERP 253
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 114/270 (42%), Gaps = 29/270 (10%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
S E +G G G V+ +A+K L S + FL+ + ++RH
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEK 74
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
+V+L +E ++ EY S G+L D L E+ L + MA A + Y+
Sbjct: 75 LVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFE 688
+ VHR+ ++ANI V+D GLA LI + G + APE
Sbjct: 132 RM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAA 187
Query: 689 -SGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDP 746
G +T +SDV+SFG+++ EL T GR Y NR L ++ RM P
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR----------EVLDQVERGYRM--P 235
Query: 747 SLSGQYPAKSLSHFADIISRCVQSEPEFRP 776
P + D++ +C + +PE RP
Sbjct: 236 C-----PPECPESLHDLMCQCWRKDPEERP 260
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 114/270 (42%), Gaps = 29/270 (10%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
S E +G G G V+ +A+K L S + FL+ + ++RH
Sbjct: 7 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEK 63
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
+V+L +E ++ EY S G+L D L E+ L + MA A + Y+
Sbjct: 64 LVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVE 120
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFE 688
+ VHR+ ++ANI V+D GLA LI + G + APE
Sbjct: 121 RM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAA 176
Query: 689 -SGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDP 746
G +T +SDV+SFG+++ EL T GR Y NR L ++ RM P
Sbjct: 177 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR----------EVLDQVERGYRM--P 224
Query: 747 SLSGQYPAKSLSHFADIISRCVQSEPEFRP 776
P + D++ +C + +PE RP
Sbjct: 225 C-----PPECPESLHDLMCQCWRKDPEERP 249
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 117/280 (41%), Gaps = 30/280 (10%)
Query: 510 SFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
S E +G G G V+ +A+K L S + FL+ + ++RH +
Sbjct: 268 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEKL 324
Query: 570 VELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
V+L +E ++ EY S G+L D L E L + MA A + Y+
Sbjct: 325 VQLYAVVSEE-PIYIVTEYMSKGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYVER 381
Query: 630 ICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFE- 688
+ VHR+ ++ANI V+D GLA LI + G + APE
Sbjct: 382 MN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAAL 437
Query: 689 SGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPS 747
G +T +SDV+SFG+++ EL T GR Y NR L ++ RM
Sbjct: 438 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR----------EVLDQVERGYRM---- 483
Query: 748 LSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVD 787
P + D++ +C + EPE RP E +Q ++
Sbjct: 484 ---PCPPECPESLHDLMCQCWRKEPEERPTF-EYLQAFLE 519
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 125/289 (43%), Gaps = 29/289 (10%)
Query: 512 SQENLIGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+ ++ +G G G VY L +AVK L + + +EFL+ + I+H N+V
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLV 72
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
+L G C +I E+ + G L D L + + +S + MA + A+EYL
Sbjct: 73 QLLGVCTREPPFYIIIEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLE-- 128
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FES 689
+ +HR+ + N V V+D GL+ L++ + + +G + APE
Sbjct: 129 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAY 186
Query: 690 GIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSL 748
++ +SDV++FGV++ E+ T G Y P + D+ + +++
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMSPY----------------PGI-DLSQVYELLEKDY 229
Query: 749 SGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIRRERCSNE 797
+ P +++ C Q P RP +E+ Q M + S+E
Sbjct: 230 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDE 278
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 135/317 (42%), Gaps = 56/317 (17%)
Query: 511 FSQENLI-----GAGMLGSVYRAQLPDGK------LLAVKKLDKRASSQQKDDEFLELVN 559
F ++NL+ G G G V +A K +AVK L + AS + D L N
Sbjct: 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRD-LLSEFN 78
Query: 560 NIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDEL--------------- 604
+ ++ H ++++L G C++ G LLI EY G+L+ L ++
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 605 -----KNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCG 659
+ L+ I A ++ ++YL E+ +VHR+ + NI + +SD G
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNILVAEGRKMKISDFG 195
Query: 660 LAPLI--SSGSVSQLSGHLLTAYGYGAPEFESGIYTCQSDVYSFGVVMLELLT-GRKSYD 716
L+ + V + G + + F+ IYT QSDV+SFGV++ E++T G Y
Sbjct: 196 LSRDVYEEDSXVKRSQGRIPVKWMAIESLFDH-IYTTQSDVWSFGVLLWEIVTLGGNPYP 254
Query: 717 RTRNRGEQFLVRWAIPQLHDIDALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRP 776
IP + L ++ + P ++ +C + EP+ RP
Sbjct: 255 -------------GIPP----ERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRP 297
Query: 777 PMSEVVQDLVDMIRRER 793
+++ +DL M+ + R
Sbjct: 298 VFADISKDLEKMMVKRR 314
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 118/284 (41%), Gaps = 35/284 (12%)
Query: 517 IGAGMLGSVYRAQL-PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
IG G G V+ +L D L+AVK + K +FL+ + + H NIV L G
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKA-KFLQEARILKQYSHPNIVRLIGV 180
Query: 576 CAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPI 635
C + ++ E G L ++ L T ++M AA +EYL C
Sbjct: 181 CTQKQPIYIVMELVQGGDFLTFLRTEG---ARLRVKTLLQMVGDAAAGMEYLESKC---C 234
Query: 636 VHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FESGIYTC 694
+HR+ + N + +SD G++ + G + G + APE G Y+
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSS 294
Query: 695 QSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLV----RWAIPQLHDIDALSRMVDPSLS 749
+SDV+SFG+++ E + G Y N+ + V R P+L DA+ R+++
Sbjct: 295 ESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPELCP-DAVFRLME---- 349
Query: 750 GQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIRRER 793
+C EP RP S + Q+L + +R R
Sbjct: 350 ----------------QCWAYEPGQRPSFSTIYQELQSIRKRHR 377
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 125/289 (43%), Gaps = 29/289 (10%)
Query: 512 SQENLIGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+ ++ +G G G VY L +AVK L + + +EFL+ + I+H N+V
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLV 72
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
+L G C +I E+ + G L D L + + +S + MA + A+EYL
Sbjct: 73 QLLGVCTREPPFYIIIEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLE-- 128
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FES 689
+ +HR+ + N V V+D GL+ L++ + + +G + APE
Sbjct: 129 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAY 186
Query: 690 GIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSL 748
++ +SDV++FGV++ E+ T G Y P + D+ + +++
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMSPY----------------PGI-DLSQVYELLEKDY 229
Query: 749 SGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIRRERCSNE 797
+ P +++ C Q P RP +E+ Q M + S+E
Sbjct: 230 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDE 278
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 114/270 (42%), Gaps = 29/270 (10%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
S E +G G G V+ +A+K L S + FL+ + ++RH
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEK 74
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
+V+L +E ++ EY S G+L D L E+ L + MA A + Y+
Sbjct: 75 LVQLYAVVSEE-PIYIVCEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFE 688
+ VHR+ ++ANI V+D GLA LI + G + APE
Sbjct: 132 RM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAA 187
Query: 689 -SGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDP 746
G +T +SDV+SFG+++ EL T GR Y NR L ++ RM P
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR----------EVLDQVERGYRM--P 235
Query: 747 SLSGQYPAKSLSHFADIISRCVQSEPEFRP 776
P + D++ +C + +PE RP
Sbjct: 236 C-----PPECPESLHDLMCQCWRKDPEERP 260
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 123/288 (42%), Gaps = 37/288 (12%)
Query: 514 ENLIGAGMLGSVYRAQL--PDGK--LLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
E +IGAG G V R +L P K +A+K L K ++++ EFL + + + H NI
Sbjct: 21 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTL-KGGYTERQRREFLSEASIMGQFEHPNI 79
Query: 570 VELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
+ L+G +++ E+ NG L L +D + + M G A + YL E
Sbjct: 80 IRLEGVVTNSMPVMILTEFMENGALDSFLRLND---GQFTVIQLVGMLRGIASGMRYLAE 136
Query: 630 ICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGS-----VSQLSGHLLTAYGYGA 684
+ VHR+ + NI VSD GL+ + S S L G + + A
Sbjct: 137 MS---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKI--PIRWTA 191
Query: 685 PE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSR 742
PE +T SD +S+G+VM E+++ G + Y W + I+A+ +
Sbjct: 192 PEAIAFRKFTSASDAWSYGIVMWEVMSFGERPY-------------WDMSNQDVINAIEQ 238
Query: 743 MVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIR 790
D L P + ++ C Q + RP +VV L MIR
Sbjct: 239 --DYRLPP--PPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKMIR 282
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 125/289 (43%), Gaps = 29/289 (10%)
Query: 512 SQENLIGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+ ++ +G G G VY L +AVK L + + +EFL+ + I+H N+V
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLV 72
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
+L G C +I E+ + G L D L + + +S + MA + A+EYL
Sbjct: 73 QLLGVCTREPPFYIITEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLE-- 128
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FES 689
+ +HR+ + N V V+D GL+ L++ + + +G + APE
Sbjct: 129 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAY 186
Query: 690 GIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSL 748
++ +SDV++FGV++ E+ T G Y P + D+ + +++
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMSPY----------------PGI-DLSQVYELLEKDY 229
Query: 749 SGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIRRERCSNE 797
+ P +++ C Q P RP +E+ Q M + S+E
Sbjct: 230 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDE 278
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 125/289 (43%), Gaps = 29/289 (10%)
Query: 512 SQENLIGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+ ++ +G G G VY L +AVK L + + +EFL+ + I+H N+V
Sbjct: 21 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLV 77
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
+L G C +I E+ + G L D L + + +S + MA + A+EYL
Sbjct: 78 QLLGVCTREPPFYIITEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLE-- 133
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FES 689
+ +HR+ + N V V+D GL+ L++ + + +G + APE
Sbjct: 134 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAY 191
Query: 690 GIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSL 748
++ +SDV++FGV++ E+ T G Y P + D+ + +++
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMSPY----------------PGI-DLSQVYELLEKDY 234
Query: 749 SGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIRRERCSNE 797
+ P +++ C Q P RP +E+ Q M + S+E
Sbjct: 235 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDE 283
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 118/284 (41%), Gaps = 35/284 (12%)
Query: 517 IGAGMLGSVYRAQL-PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
IG G G V+ +L D L+AVK + K +FL+ + + H NIV L G
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKA-KFLQEARILKQYSHPNIVRLIGV 180
Query: 576 CAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPI 635
C + ++ E G L ++ L T ++M AA +EYL C
Sbjct: 181 CTQKQPIYIVMELVQGGDFLTFLRTEG---ARLRVKTLLQMVGDAAAGMEYLESKC---C 234
Query: 636 VHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FESGIYTC 694
+HR+ + N + +SD G++ + G + G + APE G Y+
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSS 294
Query: 695 QSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLV----RWAIPQLHDIDALSRMVDPSLS 749
+SDV+SFG+++ E + G Y N+ + V R P+L DA+ R+++
Sbjct: 295 ESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPELCP-DAVFRLME---- 349
Query: 750 GQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIRRER 793
+C EP RP S + Q+L + +R R
Sbjct: 350 ----------------QCWAYEPGQRPSFSTIYQELQSIRKRHR 377
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 123/288 (42%), Gaps = 37/288 (12%)
Query: 514 ENLIGAGMLGSVYRAQL--PDGK--LLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
E +IGAG G V R +L P K +A+K L K ++++ EFL + + + H NI
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTL-KGGYTERQRREFLSEASIMGQFEHPNI 77
Query: 570 VELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
+ L+G +++ E+ NG L L +D + + M G A + YL E
Sbjct: 78 IRLEGVVTNSMPVMILTEFMENGALDSFLRLND---GQFTVIQLVGMLRGIASGMRYLAE 134
Query: 630 ICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGS-----VSQLSGHLLTAYGYGA 684
+ VHR+ + NI VSD GL+ + S S L G + + A
Sbjct: 135 MS---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKI--PIRWTA 189
Query: 685 PE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSR 742
PE +T SD +S+G+VM E+++ G + Y W + I+A+ +
Sbjct: 190 PEAIAFRKFTSASDAWSYGIVMWEVMSFGERPY-------------WDMSNQDVINAIEQ 236
Query: 743 MVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIR 790
D L P + ++ C Q + RP +VV L MIR
Sbjct: 237 --DYRLPP--PPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKMIR 280
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 113/270 (41%), Gaps = 29/270 (10%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
S E +G G G V+ +A+K L S + FL+ + ++RH
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEK 74
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
+V+L +E ++ EY S G L D L E+ L + MA A + Y+
Sbjct: 75 LVQLYAVVSEE-PIYIVMEYMSKGCLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFE 688
+ VHR+ ++ANI V+D GLA LI + G + APE
Sbjct: 132 RM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAA 187
Query: 689 -SGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDP 746
G +T +SDV+SFG+++ EL T GR Y NR L ++ RM P
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR----------EVLDQVERGYRM--P 235
Query: 747 SLSGQYPAKSLSHFADIISRCVQSEPEFRP 776
P + D++ +C + +PE RP
Sbjct: 236 C-----PPECPESLHDLMCQCWRKDPEERP 260
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 135/317 (42%), Gaps = 56/317 (17%)
Query: 511 FSQENLI-----GAGMLGSVYRAQLPDGK------LLAVKKLDKRASSQQKDDEFLELVN 559
F ++NL+ G G G V +A K +AVK L + AS + D L N
Sbjct: 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRD-LLSEFN 78
Query: 560 NIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDEL--------------- 604
+ ++ H ++++L G C++ G LLI EY G+L+ L ++
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 605 -----KNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCG 659
+ L+ I A ++ ++YL E+ +VHR+ + NI + +SD G
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNILVAEGRKMKISDFG 195
Query: 660 LAPLI--SSGSVSQLSGHLLTAYGYGAPEFESGIYTCQSDVYSFGVVMLELLT-GRKSYD 716
L+ + V + G + + F+ IYT QSDV+SFGV++ E++T G Y
Sbjct: 196 LSRDVYEEDSYVKRSQGRIPVKWMAIESLFDH-IYTTQSDVWSFGVLLWEIVTLGGNPYP 254
Query: 717 RTRNRGEQFLVRWAIPQLHDIDALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRP 776
IP + L ++ + P ++ +C + EP+ RP
Sbjct: 255 -------------GIPP----ERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRP 297
Query: 777 PMSEVVQDLVDMIRRER 793
+++ +DL M+ + R
Sbjct: 298 VFADISKDLEKMMVKRR 314
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 122/284 (42%), Gaps = 29/284 (10%)
Query: 517 IGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
+G G G VY L +AVK L + + +EFL+ + I+H N+V+L G
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 576 CAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPI 635
C +I E+ + G L D L + + +S + MA + A+EYL +
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLE---KKNF 132
Query: 636 VHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FESGIYTC 694
+HR+ + N V V+D GL+ L++ + + +G + APE ++
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSI 191
Query: 695 QSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSLSGQYP 753
+SDV++FGV++ E+ T G Y P + D+ + +++ + P
Sbjct: 192 KSDVWAFGVLLWEIATYGMSPY----------------PGI-DLSQVYELLEKDYRMERP 234
Query: 754 AKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIRRERCSNE 797
+++ C Q P RP +E+ Q M + S+E
Sbjct: 235 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDE 278
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 118/281 (41%), Gaps = 30/281 (10%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
S E +G G G V+ +A+K L S + FL+ + ++RH
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEK 240
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
+V+L +E ++ EY S G+L D L E L + MA A + Y+
Sbjct: 241 LVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYVE 297
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFE 688
+ VHR+ ++ANI V+D GLA LI + G + APE
Sbjct: 298 RM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAA 353
Query: 689 -SGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDP 746
G +T +SDV+SFG+++ EL T GR Y NR L ++ RM P
Sbjct: 354 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR----------EVLDQVERGYRM--P 401
Query: 747 SLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVD 787
P + D++ +C + EPE RP E +Q ++
Sbjct: 402 C-----PPECPESLHDLMCQCWRKEPEERPTF-EYLQAFLE 436
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 124/288 (43%), Gaps = 37/288 (12%)
Query: 514 ENLIGAGMLGSVYRAQLP-DGK---LLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
E +IGAG G V L GK +A+K L + +Q+ D FL + + + H N+
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRD-FLSEASIMGQFDHPNV 70
Query: 570 VELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
+ L+G + ++I E+ NG+L L +D + + M G A ++YL +
Sbjct: 71 IHLEGVVTKSTPVMIITEFMENGSLDSFLRQND---GQFTVIQLVGMLRGIAAGMKYLAD 127
Query: 630 ICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGS-----VSQLSGHLLTAYGYGA 684
+ VHR + NI VSD GL+ + + S L G + + A
Sbjct: 128 M---NYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKI--PIRWTA 182
Query: 685 PE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSR 742
PE + +T SDV+S+G+VM E+++ G + Y W + I+A+ +
Sbjct: 183 PEAIQYRKFTSASDVWSYGIVMWEVMSYGERPY-------------WDMTNQDVINAIEQ 229
Query: 743 MVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIR 790
D L P S ++ C Q + RP ++V L MIR
Sbjct: 230 --DYRLPP--PMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIR 273
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 118/281 (41%), Gaps = 30/281 (10%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
S E +G G G V+ +A+K L S + FL+ + ++RH
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEK 240
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
+V+L +E ++ EY S G+L D L E L + MA A + Y+
Sbjct: 241 LVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYVE 297
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFE 688
+ VHR+ ++ANI V+D GLA LI + G + APE
Sbjct: 298 RM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAA 353
Query: 689 -SGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDP 746
G +T +SDV+SFG+++ EL T GR Y NR L ++ RM P
Sbjct: 354 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR----------EVLDQVERGYRM--P 401
Query: 747 SLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVD 787
P + D++ +C + EPE RP E +Q ++
Sbjct: 402 C-----PPECPESLHDLMCQCWRKEPEERPTF-EYLQAFLE 436
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 113/270 (41%), Gaps = 29/270 (10%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
S E +G G G V+ +A+K L S + FL+ + ++RH
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEK 74
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
+V+L +E ++ EY S G L D L E+ L + MA A + Y+
Sbjct: 75 LVQLYAVVSEE-PIYIVTEYMSKGCLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFE 688
+ VHR+ ++ANI V+D GLA LI + G + APE
Sbjct: 132 RM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAA 187
Query: 689 -SGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDP 746
G +T +SDV+SFG+++ EL T GR Y NR L ++ RM P
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR----------EVLDQVERGYRM--P 235
Query: 747 SLSGQYPAKSLSHFADIISRCVQSEPEFRP 776
P + D++ +C + +PE RP
Sbjct: 236 C-----PPECPESLHDLMCQCWRKDPEERP 260
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 124/289 (42%), Gaps = 29/289 (10%)
Query: 512 SQENLIGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+ ++ +G G G VY L +AVK L + + +EFL+ + I+H N+V
Sbjct: 17 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLV 73
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
+L G C +I E+ + G L D L + + N + MA + A+EYL
Sbjct: 74 QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQISSAMEYLE-- 129
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FES 689
+ +HR+ + N V V+D GL+ L++ + + +G + APE
Sbjct: 130 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI-KWTAPESLAY 187
Query: 690 GIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSL 748
++ +SDV++FGV++ E+ T G Y P + D+ + +++
Sbjct: 188 NKFSIKSDVWAFGVLLWEIATYGMSPY----------------PGI-DLSQVYELLEKDY 230
Query: 749 SGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIRRERCSNE 797
+ P +++ C Q P RP +E+ Q M + S+E
Sbjct: 231 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDE 279
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 124/281 (44%), Gaps = 40/281 (14%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
S E +GAG G V+ A +AVK + + S + FL N + ++H
Sbjct: 182 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA---FLAEANVMKTLQHDK 238
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
+V+L + +I E+ + G+L D L SD+ K L ++ +A+ E +
Sbjct: 239 LVKLHAVVTKE-PIYIITEFMAKGSLLDFLKSDEGSKQPLP-----KLIDFSAQIAEGMA 292
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-F 687
I Q +HR+ ++ANI ++D GLA + + + + APE
Sbjct: 293 FIEQRNYIHRDLRAANILVSASLVCKIADFGLARVGAKFPIK-----------WTAPEAI 341
Query: 688 ESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDP 746
G +T +SDV+SFG++++E++T GR Y N P++ I AL R
Sbjct: 342 NFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN-----------PEV--IRALER---- 384
Query: 747 SLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVD 787
P +I+ RC ++ PE RP E +Q ++D
Sbjct: 385 GYRMPRPENCPEELYNIMMRCWKNRPEERPTF-EYIQSVLD 424
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 121/284 (42%), Gaps = 29/284 (10%)
Query: 517 IGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
+G G G VY L +AVK L + + +EFL+ + I+H N+V+L G
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGV 90
Query: 576 CAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPI 635
C +I E+ + G L D L + + N + MA + A+EYL +
Sbjct: 91 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQISSAMEYLE---KKNF 145
Query: 636 VHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FESGIYTC 694
+HR+ + N V V+D GL+ L++ + + +G + APE ++
Sbjct: 146 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSI 204
Query: 695 QSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSLSGQYP 753
+SDV++FGV++ E+ T G Y P + D+ + +++ + P
Sbjct: 205 KSDVWAFGVLLWEIATYGMSPY----------------PGI-DLSQVYELLEKDYRMERP 247
Query: 754 AKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIRRERCSNE 797
+++ C Q P RP +E+ Q M + S+E
Sbjct: 248 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDE 291
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 118/281 (41%), Gaps = 30/281 (10%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
S E +G G G V+ +A+K L S + FL+ + ++RH
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEK 240
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
+V+L +E ++ EY S G+L D L E L + MA A + Y+
Sbjct: 241 LVQLYAVVSEE-PIYIVGEYMSKGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYVE 297
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFE 688
+ VHR+ ++ANI V+D GLA LI + G + APE
Sbjct: 298 RM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAA 353
Query: 689 -SGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDP 746
G +T +SDV+SFG+++ EL T GR Y NR L ++ RM P
Sbjct: 354 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR----------EVLDQVERGYRM--P 401
Query: 747 SLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVD 787
P + D++ +C + EPE RP E +Q ++
Sbjct: 402 C-----PPECPESLHDLMCQCWRKEPEERPTF-EYLQAFLE 436
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 113/270 (41%), Gaps = 29/270 (10%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
S E +G G G V+ +A+K L S + FL+ + ++RH
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEK 74
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
+V+L +E ++ EY S G+L D L E+ L + MA A + Y+
Sbjct: 75 LVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFE 688
+ VHR+ +ANI V+D GLA LI + G + APE
Sbjct: 132 RM---NYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAA 187
Query: 689 -SGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDP 746
G +T +SDV+SFG+++ EL T GR Y NR L ++ RM P
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR----------EVLDQVERGYRM--P 235
Query: 747 SLSGQYPAKSLSHFADIISRCVQSEPEFRP 776
P + D++ +C + +PE RP
Sbjct: 236 C-----PPECPESLHDLMCQCWRKDPEERP 260
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 121/284 (42%), Gaps = 29/284 (10%)
Query: 517 IGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
+G G G VY L +AVK L + + +EFL+ + I+H N+V+L G
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 576 CAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPI 635
C +I E+ + G L D L + + N + MA + A+EYL +
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQISSAMEYLE---KKNF 137
Query: 636 VHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FESGIYTC 694
+HR+ + N V V+D GL+ L++ + + +G + APE ++
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSI 196
Query: 695 QSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSLSGQYP 753
+SDV++FGV++ E+ T G Y P + D+ + +++ + P
Sbjct: 197 KSDVWAFGVLLWEIATYGMSPY----------------PGI-DLSQVYELLEKDYRMERP 239
Query: 754 AKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIRRERCSNE 797
+++ C Q P RP +E+ Q M + S+E
Sbjct: 240 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDE 283
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 124/289 (42%), Gaps = 29/289 (10%)
Query: 512 SQENLIGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+ ++ +G G G VY L +AVK L + + +EFL+ + I+H N+V
Sbjct: 18 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLV 74
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
+L G C +I E+ + G L D L + + N + MA + A+EYL
Sbjct: 75 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQISSAMEYLE-- 130
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FES 689
+ +HR+ + N V V+D GL+ L++ + + +G + APE
Sbjct: 131 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAY 188
Query: 690 GIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSL 748
++ +SDV++FGV++ E+ T G Y P + D+ + +++
Sbjct: 189 NKFSIKSDVWAFGVLLWEIATYGMSPY----------------PGI-DLSQVYELLEKDY 231
Query: 749 SGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIRRERCSNE 797
+ P +++ C Q P RP +E+ Q M + S+E
Sbjct: 232 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDE 280
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 124/289 (42%), Gaps = 29/289 (10%)
Query: 512 SQENLIGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+ ++ +G G G VY L +AVK L + + +EFL+ + I+H N+V
Sbjct: 18 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLV 74
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
+L G C +I E+ + G L D L + + N + MA + A+EYL
Sbjct: 75 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQISSAMEYLE-- 130
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FES 689
+ +HR+ + N V V+D GL+ L++ + + +G + APE
Sbjct: 131 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAY 188
Query: 690 GIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSL 748
++ +SDV++FGV++ E+ T G Y P + D+ + +++
Sbjct: 189 NKFSIKSDVWAFGVLLWEIATYGMSPY----------------PGI-DLSQVYELLEKDY 231
Query: 749 SGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIRRERCSNE 797
+ P +++ C Q P RP +E+ Q M + S+E
Sbjct: 232 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDE 280
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 121/284 (42%), Gaps = 29/284 (10%)
Query: 517 IGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
+G G G VY L +AVK L + + +EFL+ + I+H N+V+L G
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGV 78
Query: 576 CAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPI 635
C +I E+ + G L D L + + N + MA + A+EYL +
Sbjct: 79 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQISSAMEYLE---KKNF 133
Query: 636 VHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FESGIYTC 694
+HR+ + N V V+D GL+ L++ + + +G + APE ++
Sbjct: 134 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPI-KWTAPESLAYNKFSI 192
Query: 695 QSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSLSGQYP 753
+SDV++FGV++ E+ T G Y P + D+ + +++ + P
Sbjct: 193 KSDVWAFGVLLWEIATYGMSPY----------------PGI-DLSQVYELLEKDYRMERP 235
Query: 754 AKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIRRERCSNE 797
+++ C Q P RP +E+ Q M + S+E
Sbjct: 236 EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDE 279
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 124/289 (42%), Gaps = 29/289 (10%)
Query: 512 SQENLIGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+ ++ +G G G VY L +AVK L + + +EFL+ + I+H N+V
Sbjct: 18 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLV 74
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
+L G C +I E+ + G L D L + + N + MA + A+EYL
Sbjct: 75 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQISSAMEYLE-- 130
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FES 689
+ +HR+ + N V V+D GL+ L++ + + +G + APE
Sbjct: 131 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPI-KWTAPESLAY 188
Query: 690 GIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSL 748
++ +SDV++FGV++ E+ T G Y P + D+ + +++
Sbjct: 189 NKFSIKSDVWAFGVLLWEIATYGMSPY----------------PGI-DLSQVYELLEKDY 231
Query: 749 SGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIRRERCSNE 797
+ P +++ C Q P RP +E+ Q M + S+E
Sbjct: 232 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDE 280
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 124/289 (42%), Gaps = 29/289 (10%)
Query: 512 SQENLIGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+ ++ +G G G VY L +AVK L + + +EFL+ + I+H N+V
Sbjct: 14 TMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLV 70
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
+L G C +I E+ + G L D L + + +S + MA + A+EYL
Sbjct: 71 QLLGVCTREPPFYIITEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLE-- 126
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FES 689
+ +HR+ + N V V+D GL+ L++ + + +G + APE
Sbjct: 127 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI-KWTAPESLAY 184
Query: 690 GIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSL 748
++ +SDV++FGV++ E+ T G Y P + D + +++
Sbjct: 185 NKFSIKSDVWAFGVLLWEIATYGMSPY----------------PGI-DPSQVYELLEKDY 227
Query: 749 SGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIRRERCSNE 797
+ P +++ C Q P RP +E+ Q M + S+E
Sbjct: 228 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDE 276
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 91/195 (46%), Gaps = 10/195 (5%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
+GAG G V+ + +AVK L S Q FLE N + ++H +V L
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQA---FLEEANLMKTLQHDKLVRLYAVV 77
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+I EY + G+L D L SD+ K L ++ +A+ E + I + +
Sbjct: 78 TREEPIYIITEYMAKGSLLDFLKSDEGGKVLLP-----KLIDFSAQIAEGMAYIERKNYI 132
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FESGIYTCQ 695
HR+ ++AN+ ++D GLA +I + G + APE G +T +
Sbjct: 133 HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPI-KWTAPEAINFGCFTIK 191
Query: 696 SDVYSFGVVMLELLT 710
SDV+SFG+++ E++T
Sbjct: 192 SDVWSFGILLYEIVT 206
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 124/289 (42%), Gaps = 29/289 (10%)
Query: 512 SQENLIGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+ ++ +G G G VY L +AVK L + + +EFL+ + I+H N+V
Sbjct: 14 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLV 70
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
+L G C +I E+ + G L D L + + +S + MA + A+EYL
Sbjct: 71 QLLGVCTREPPFYIIIEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLE-- 126
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FES 689
+ +HR+ + N V V+D GL+ L++ + + +G + APE
Sbjct: 127 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI-KWTAPESLAY 184
Query: 690 GIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSL 748
++ +SDV++FGV++ E+ T G Y P + D + +++
Sbjct: 185 NKFSIKSDVWAFGVLLWEIATYGMSPY----------------PGI-DPSQVYELLEKDY 227
Query: 749 SGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIRRERCSNE 797
+ P +++ C Q P RP +E+ Q M + S+E
Sbjct: 228 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDE 276
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 124/289 (42%), Gaps = 29/289 (10%)
Query: 512 SQENLIGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+ ++ +G G G VY L +AVK L + + +EFL+ + I+H N+V
Sbjct: 14 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLV 70
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
+L G C +I E+ + G L D L + + +S + MA + A+EYL
Sbjct: 71 QLLGVCTREPPFYIITEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLE-- 126
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FES 689
+ +HR+ + N V V+D GL+ L++ + + +G + APE
Sbjct: 127 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPI-KWTAPESLAY 184
Query: 690 GIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSL 748
++ +SDV++FGV++ E+ T G Y P + D + +++
Sbjct: 185 NKFSIKSDVWAFGVLLWEIATYGMSPY----------------PGI-DPSQVYELLEKDY 227
Query: 749 SGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIRRERCSNE 797
+ P +++ C Q P RP +E+ Q M + S+E
Sbjct: 228 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDE 276
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 113/270 (41%), Gaps = 29/270 (10%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
S E +G G G V+ +A+K L S + FL+ + ++RH
Sbjct: 15 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEK 71
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
+V+L +E ++ EY + G+L D L E L + M+ A + Y+
Sbjct: 72 LVQLYAVVSEE-PIYIVTEYMNKGSLLDFLKG--ETGKYLRLPQLVDMSAQIASGMAYVE 128
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFE 688
+ VHR+ ++ANI V+D GLA LI + G + APE
Sbjct: 129 RM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI-KWTAPEAA 184
Query: 689 -SGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDP 746
G +T +SDV+SFG+++ EL T GR Y NR L ++ RM P
Sbjct: 185 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR----------EVLDQVERGYRM--P 232
Query: 747 SLSGQYPAKSLSHFADIISRCVQSEPEFRP 776
P + D++ +C + EPE RP
Sbjct: 233 C-----PPECPESLHDLMCQCWRKEPEERP 257
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 113/270 (41%), Gaps = 29/270 (10%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
S E +G G G V+ +A+K L S + FL+ + ++RH
Sbjct: 15 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEK 71
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
+V+L +E ++ EY + G+L D L E L + M+ A + Y+
Sbjct: 72 LVQLYAVVSEE-PIYIVTEYMNKGSLLDFLKG--ETGKYLRLPQLVDMSAQIASGMAYVE 128
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFE 688
+ VHR+ ++ANI V+D GLA LI + G + APE
Sbjct: 129 RM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPI-KWTAPEAA 184
Query: 689 -SGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDP 746
G +T +SDV+SFG+++ EL T GR Y NR L ++ RM P
Sbjct: 185 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR----------EVLDQVERGYRM--P 232
Query: 747 SLSGQYPAKSLSHFADIISRCVQSEPEFRP 776
P + D++ +C + EPE RP
Sbjct: 233 C-----PPECPESLHDLMCQCWRKEPEERP 257
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 117/280 (41%), Gaps = 30/280 (10%)
Query: 510 SFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
S E +G G G V+ +A+K L + FL+ + ++RH +
Sbjct: 186 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK---PGNMSPEAFLQEAQVMKKLRHEKL 242
Query: 570 VELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
V+L +E ++ EY S G+L D L E+ L + MA A + Y+
Sbjct: 243 VQLYAVVSEE-PIYIVTEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVER 299
Query: 630 ICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFE- 688
+ VHR+ ++ANI V+D GL LI + G + APE
Sbjct: 300 M---NYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPI-KWTAPEAAL 355
Query: 689 SGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPS 747
G +T +SDV+SFG+++ EL T GR Y NR L ++ RM P
Sbjct: 356 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR----------EVLDQVERGYRM--PC 403
Query: 748 LSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVD 787
P + D++ +C + +PE RP E +Q ++
Sbjct: 404 -----PPECPESLHDLMCQCWRKDPEERPTF-EYLQAFLE 437
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 115/293 (39%), Gaps = 38/293 (12%)
Query: 517 IGAGMLGSVYRA------QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G V A + + +AVK L + A+ + EL I H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 571 ELKGYCAEHGQRLL-IYEYCSNGTLQDMLHS----------DDELKNNLSWNTRIRMALG 619
L G C + G L+ I E+C G L L S +D K+ L+ I +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 620 AARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTA 679
A+ +E+L +HR+ + NI V + D GLA I G
Sbjct: 157 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 680 YGYGAPE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDI 737
+ APE +YT QSDV+SFGV++ E+ + G Y P +
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY----------------PGVKID 257
Query: 738 DALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIR 790
+ R + + P + + C EP RP SE+V+ L ++++
Sbjct: 258 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 310
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 121/282 (42%), Gaps = 29/282 (10%)
Query: 512 SQENLIGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+ ++ +G G G VY L +AVK L + + +EFL+ + I+H N+V
Sbjct: 21 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLV 77
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
+L G C +I E+ + G L D L + + N + MA + A+EYL
Sbjct: 78 QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQISSAMEYLE-- 133
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FES 689
+ +HR+ + N V V+D GL+ L++ + + +G + APE
Sbjct: 134 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAY 191
Query: 690 GIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSL 748
++ +SDV++FGV++ E+ T G Y P + D+ + +++
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMSPY----------------PGI-DLSQVYELLEKDY 234
Query: 749 SGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIR 790
+ P +++ C Q P RP +E+ Q M +
Sbjct: 235 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 276
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 123/295 (41%), Gaps = 50/295 (16%)
Query: 517 IGAGMLGSVYRAQL--------PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIR--- 565
+G G G V A+ + +AVK L A+ + D LV+ ++ ++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD----LVSEMEMMKMIG 98
Query: 566 -HANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHS------------DDELKNNLSWNT 612
H NI+ L G C + G +I EY S G L++ L + + + +++
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKD 158
Query: 613 RIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQL 672
+ AR +EYL +HR+ + N+ + ++D GLA I++ +
Sbjct: 159 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKK 215
Query: 673 SGHLLTAYGYGAPE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWA 730
+ + + APE +YT QSDV+SFGV+M E+ T G Y
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP-------------G 262
Query: 731 IPQLHDIDALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDL 785
IP ++ L +++ PA + ++ C + P RP ++V+DL
Sbjct: 263 IP----VEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 123/295 (41%), Gaps = 50/295 (16%)
Query: 517 IGAGMLGSVYRAQL--------PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIR--- 565
+G G G V A+ + +AVK L A+ + D LV+ ++ ++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD----LVSEMEMMKMIG 98
Query: 566 -HANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHS------------DDELKNNLSWNT 612
H NI+ L G C + G +I EY S G L++ L + + + +++
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 613 RIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQL 672
+ AR +EYL +HR+ + N+ + ++D GLA I++ +
Sbjct: 159 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKK 215
Query: 673 SGHLLTAYGYGAPE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWA 730
+ + + APE +YT QSDV+SFGV+M E+ T G Y
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP-------------G 262
Query: 731 IPQLHDIDALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDL 785
IP ++ L +++ PA + ++ C + P RP ++V+DL
Sbjct: 263 IP----VEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 121/282 (42%), Gaps = 29/282 (10%)
Query: 512 SQENLIGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+ ++ +G G G VY L +AVK L + + +EFL+ + I+H N+V
Sbjct: 21 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLV 77
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
+L G C +I E+ + G L D L + + N + MA + A+EYL
Sbjct: 78 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQISSAMEYLE-- 133
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FES 689
+ +HR+ + N V V+D GL+ L++ + + +G + APE
Sbjct: 134 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAY 191
Query: 690 GIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSL 748
++ +SDV++FGV++ E+ T G Y P + D+ + +++
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMSPY----------------PGI-DLSQVYELLEKDY 234
Query: 749 SGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIR 790
+ P +++ C Q P RP +E+ Q M +
Sbjct: 235 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 276
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 121/282 (42%), Gaps = 29/282 (10%)
Query: 512 SQENLIGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+ ++ +G G G VY L +AVK L + + +EFL+ + I+H N+V
Sbjct: 20 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLV 76
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
+L G C +I E+ + G L D L + + N + MA + A+EYL
Sbjct: 77 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQISSAMEYLE-- 132
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FES 689
+ +HR+ + N V V+D GL+ L++ + + +G + APE
Sbjct: 133 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAY 190
Query: 690 GIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSL 748
++ +SDV++FGV++ E+ T G Y P + D+ + +++
Sbjct: 191 NKFSIKSDVWAFGVLLWEIATYGMSPY----------------PGI-DLSQVYELLEKDY 233
Query: 749 SGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIR 790
+ P +++ C Q P RP +E+ Q M +
Sbjct: 234 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 275
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 121/283 (42%), Gaps = 29/283 (10%)
Query: 512 SQENLIGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+ ++ +G G G VY L +AVK L + + +EFL+ + I+H N+V
Sbjct: 21 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLV 77
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
+L G C +I E+ + G L D L + + N + MA + A+EYL
Sbjct: 78 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQISSAMEYLE-- 133
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FES 689
+ +HR+ + N V V+D GL+ L++ + + +G + APE
Sbjct: 134 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI-KWTAPESLAY 191
Query: 690 GIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSL 748
++ +SDV++FGV++ E+ T G Y P + D+ + +++
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMSPY----------------PGI-DLSQVYELLEKDY 234
Query: 749 SGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIRR 791
+ P +++ C Q P RP +E+ Q M +
Sbjct: 235 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 277
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 122/275 (44%), Gaps = 27/275 (9%)
Query: 515 NLIGAGMLGSVYRA-QLPDGKLLAVK---KLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
++G+G+ G+V++ +P+G+ + + K+ + S +Q + + I + HA+IV
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 571 ELKGYCAEHGQRL-LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
L G C G L L+ +Y G+L D + + L + + A+ + YL E
Sbjct: 97 RLLGLCP--GSSLQLVTQYLPLGSLLDHVRQH---RGALGPQLLLNWGVQIAKGMYYLEE 151
Query: 630 ICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FE 688
+VHRN + N+ V V+D G+A L+ L T + A E
Sbjct: 152 HG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIH 208
Query: 689 SGIYTCQSDVYSFGVVMLELLT-GRKSYDRTR--------NRGEQFLVRWAIPQLHDIDA 739
G YT QSDV+S+GV + EL+T G + Y R +GE R A PQ+ ID
Sbjct: 209 FGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGE----RLAQPQICTIDV 264
Query: 740 LSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEF 774
MV + + + A+ +R + P +
Sbjct: 265 YMVMVKCWMIDENIRPTFKELANEFTRMARDPPRY 299
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 135/280 (48%), Gaps = 48/280 (17%)
Query: 517 IGAGMLG-SVYRAQLPDGKLLAVKKLD-KRASSQQKDDEFLELVNNIDRIRHANIVELKG 574
IG G G ++ DG+ +K+++ R SS+++++ E V + ++H NIV+ +
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRRE-VAVLANMKHPNIVQYRE 90
Query: 575 YCAEHGQRLLIYEYCSNGTL-------QDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
E+G ++ +YC G L + +L +D++ L W +I + AL+++
Sbjct: 91 SFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQI---LDWFVQICL------ALKHV 141
Query: 628 HEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEF 687
H+ I+HR+ KS NI V + D G+A +++S +V + T Y Y +PE
Sbjct: 142 HD---RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS-TVELARACIGTPY-YLSPEI 196
Query: 688 -ESGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDP 746
E+ Y +SD+++ G V+ EL T + ++ + ++ +V
Sbjct: 197 CENKPYNNKSDIWALGCVLYELCTLKHAF--------------------EAGSMKNLVLK 236
Query: 747 SLSGQYPAKSLSHFAD---IISRCVQSEPEFRPPMSEVVQ 783
+SG +P SL + D ++S+ + P RP ++ +++
Sbjct: 237 IISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 114/291 (39%), Gaps = 36/291 (12%)
Query: 517 IGAGMLGSVYRA------QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G V A + + +AVK L + A+ + EL I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 571 ELKGYCAEHGQRLL-IYEYCSNGTLQDMLHSD--------DELKNNLSWNTRIRMALGAA 621
L G C + G L+ I E+C G L L S D K+ L+ I + A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 622 RALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYG 681
+ +E+L +HR+ + NI V + D GLA I G
Sbjct: 155 KGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 682 YGAPE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDA 739
+ APE +YT QSDV+SFGV++ E+ + G Y P + +
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY----------------PGVKIDEE 255
Query: 740 LSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIR 790
R + + P + + C EP RP SE+V+ L ++++
Sbjct: 256 FXRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 306
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 123/295 (41%), Gaps = 50/295 (16%)
Query: 517 IGAGMLGSVYRAQL--------PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIR--- 565
+G G G V A+ + +AVK L A+ + D LV+ ++ ++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSD----LVSEMEMMKMIG 98
Query: 566 -HANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHS------------DDELKNNLSWNT 612
H NI+ L G C + G +I EY S G L++ L + + + +++
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 613 RIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQL 672
+ AR +EYL +HR+ + N+ + ++D GLA I++ +
Sbjct: 159 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 673 SGHLLTAYGYGAPE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWA 730
+ + + APE +YT QSDV+SFGV+M E+ T G Y
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP-------------G 262
Query: 731 IPQLHDIDALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDL 785
IP ++ L +++ PA + ++ C + P RP ++V+DL
Sbjct: 263 IP----VEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 123/295 (41%), Gaps = 50/295 (16%)
Query: 517 IGAGMLGSVYRAQL--------PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIR--- 565
+G G G V A+ + +AVK L A+ + D LV+ ++ ++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD----LVSEMEMMKMIG 98
Query: 566 -HANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHS------------DDELKNNLSWNT 612
H NI+ L G C + G +I EY S G L++ L + + + +++
Sbjct: 99 KHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 613 RIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQL 672
+ AR +EYL +HR+ + N+ + ++D GLA I++ +
Sbjct: 159 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 673 SGHLLTAYGYGAPE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWA 730
+ + + APE +YT QSDV+SFGV+M E+ T G Y
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP-------------G 262
Query: 731 IPQLHDIDALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDL 785
IP ++ L +++ PA + ++ C + P RP ++V+DL
Sbjct: 263 IP----VEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 124/294 (42%), Gaps = 48/294 (16%)
Query: 517 IGAGMLGSVYRAQL--------PDGKLLAVKKLDKRASSQQKDDEF--LELVNNIDRIRH 566
+G G G V A+ + +AVK L A+ + D +E++ I + H
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK--H 146
Query: 567 ANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHS------------DDELKNNLSWNTRI 614
NI+ L G C + G +I EY S G L++ L + + + +++ +
Sbjct: 147 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 206
Query: 615 RMALGAARALEYL-HEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLS 673
AR +EYL + C +HR+ + N+ + ++D GLA I++ + +
Sbjct: 207 SCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 262
Query: 674 GHLLTAYGYGAPE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAI 731
+ + APE +YT QSDV+SFGV+M E+ T G Y I
Sbjct: 263 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP-------------GI 309
Query: 732 PQLHDIDALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDL 785
P ++ L +++ PA + ++ C + P RP ++V+DL
Sbjct: 310 P----VEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 359
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 128/293 (43%), Gaps = 42/293 (14%)
Query: 517 IGAGMLGSVYRAQ---LPD--GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+G G GSV + L D G L+AVK+L QQ+D F + + + IV+
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRD--FQREIQILKALHSDFIVK 88
Query: 572 LKGYCAEHGQR--LLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
+G G++ L+ EY +G L+D L R R L A+R L Y +
Sbjct: 89 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQ-------------RHRARLDASRLLLYSSQ 135
Query: 630 ICQ-------PPIVHRNFKSANIXXXXXXAVSVSDCGLA---PLISSGSVSQLSGHLLTA 679
IC+ VHR+ + NI V ++D GLA PL V + G
Sbjct: 136 ICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQS-PI 194
Query: 680 YGYGAPEFESGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDA 739
+ Y I++ QSDV+SFGVV+ EL T D++ + +FL + D+ A
Sbjct: 195 FWYAPESLSDNIFSRQSDVWSFGVVLYELFT---YCDKSCSPSAEFLRMMGCER--DVPA 249
Query: 740 LSRMVDPSLSGQY---PAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMI 789
LSR+++ GQ P + +++ C P+ RP S + L DM+
Sbjct: 250 LSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQL-DML 301
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 123/295 (41%), Gaps = 50/295 (16%)
Query: 517 IGAGMLGSVYRAQL--------PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIR--- 565
+G G G V A+ + +AVK L A+ + D LV+ ++ ++
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD----LVSEMEMMKMIG 85
Query: 566 -HANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHS------------DDELKNNLSWNT 612
H NI+ L G C + G +I EY S G L++ L + + + +++
Sbjct: 86 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 145
Query: 613 RIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQL 672
+ AR +EYL +HR+ + N+ + ++D GLA I++ +
Sbjct: 146 LVSCTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKK 202
Query: 673 SGHLLTAYGYGAPE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWA 730
+ + + APE +YT QSDV+SFGV+M E+ T G Y
Sbjct: 203 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP-------------G 249
Query: 731 IPQLHDIDALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDL 785
IP ++ L +++ PA + ++ C + P RP ++V+DL
Sbjct: 250 IP----VEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 300
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 121/282 (42%), Gaps = 29/282 (10%)
Query: 512 SQENLIGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+ ++ +G G G VY L +AVK L + + +EFL+ + I+H N+V
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLV 72
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
+L G C +I E+ + G L D L + + N + MA + A+EYL
Sbjct: 73 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQISSAMEYLE-- 128
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FES 689
+ +HR+ + N V V+D GL+ L++ + + +G + APE
Sbjct: 129 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAY 186
Query: 690 GIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSL 748
++ +SDV++FGV++ E+ T G Y P + D+ + +++
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMSPY----------------PGI-DLSQVYELLEKDY 229
Query: 749 SGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIR 790
+ P +++ C Q P RP +E+ Q M +
Sbjct: 230 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 271
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 123/295 (41%), Gaps = 50/295 (16%)
Query: 517 IGAGMLGSVYRAQL--------PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIR--- 565
+G G G V A+ + +AVK L A+ + D LV+ ++ ++
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD----LVSEMEMMKMIG 90
Query: 566 -HANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHS------------DDELKNNLSWNT 612
H NI+ L G C + G +I EY S G L++ L + + + +++
Sbjct: 91 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 150
Query: 613 RIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQL 672
+ AR +EYL +HR+ + N+ + ++D GLA I++ +
Sbjct: 151 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 207
Query: 673 SGHLLTAYGYGAPE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWA 730
+ + + APE +YT QSDV+SFGV+M E+ T G Y
Sbjct: 208 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP-------------G 254
Query: 731 IPQLHDIDALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDL 785
IP ++ L +++ PA + ++ C + P RP ++V+DL
Sbjct: 255 IP----VEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 305
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 123/295 (41%), Gaps = 50/295 (16%)
Query: 517 IGAGMLGSVYRAQL--------PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIR--- 565
+G G G V A+ + +AVK L A+ + D LV+ ++ ++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD----LVSEMEMMKMIG 98
Query: 566 -HANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHS------------DDELKNNLSWNT 612
H NI+ L G C + G +I EY S G L++ L + + + +++
Sbjct: 99 KHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 613 RIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQL 672
+ AR +EYL +HR+ + N+ + ++D GLA I++ +
Sbjct: 159 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 673 SGHLLTAYGYGAPE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWA 730
+ + + APE +YT QSDV+SFGV+M E+ T G Y
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP-------------G 262
Query: 731 IPQLHDIDALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDL 785
IP ++ L +++ PA + ++ C + P RP ++V+DL
Sbjct: 263 IP----VEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 120/281 (42%), Gaps = 29/281 (10%)
Query: 512 SQENLIGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+ ++ +G G G VY L +AVK L + + +EFL+ + I+H N+V
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLV 72
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
+L G C +I E+ + G L D L + + N + MA + A+EYL
Sbjct: 73 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQISSAMEYLE-- 128
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FES 689
+ +HR+ + N V V+D GL+ L++ + + +G + APE
Sbjct: 129 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAY 186
Query: 690 GIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSL 748
++ +SDV++FGV++ E+ T G Y P + D+ + +++
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMSPY----------------PGI-DLSQVYELLEKDY 229
Query: 749 SGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMI 789
+ P +++ C Q P RP +E+ Q M
Sbjct: 230 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 270
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 123/295 (41%), Gaps = 50/295 (16%)
Query: 517 IGAGMLGSVYRAQL--------PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIR--- 565
+G G G V A+ + +AVK L A+ + D LV+ ++ ++
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD----LVSEMEMMKMIG 87
Query: 566 -HANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHS------------DDELKNNLSWNT 612
H NI+ L G C + G +I EY S G L++ L + + + +++
Sbjct: 88 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 147
Query: 613 RIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQL 672
+ AR +EYL +HR+ + N+ + ++D GLA I++ +
Sbjct: 148 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 204
Query: 673 SGHLLTAYGYGAPE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWA 730
+ + + APE +YT QSDV+SFGV+M E+ T G Y
Sbjct: 205 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP-------------G 251
Query: 731 IPQLHDIDALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDL 785
IP ++ L +++ PA + ++ C + P RP ++V+DL
Sbjct: 252 IP----VEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 302
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 123/286 (43%), Gaps = 35/286 (12%)
Query: 514 ENLIGAGMLGSVY--RAQLPDGKLL--AVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
E +IGAG G V R +LP + L A+K L + +Q+ D FL + + + H NI
Sbjct: 27 ERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRD-FLGEASIMGQFDHPNI 85
Query: 570 VELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
+ L+G + +++ EY NG+L L +D + + M G + ++YL +
Sbjct: 86 IHLEGVVTKSKPVMIVTEYMENGSLDTFLKKND---GQFTVIQLVGMLRGISAGMKYLSD 142
Query: 630 ICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS---SGSVSQLSGHLLTAYGYGAPE 686
+ VHR+ + NI VSD GL+ ++ + + G + + APE
Sbjct: 143 MGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTAPE 197
Query: 687 -FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMV 744
+T SDV+S+G+VM E+++ G + Y W + I A V
Sbjct: 198 AIAFRKFTSASDVWSYGIVMWEVVSYGERPY-------------WEMTNQDVIKA----V 240
Query: 745 DPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIR 790
+ P + ++ C Q E RP E+V L +IR
Sbjct: 241 EEGYRLPSPMDCPAALYQLMLDCWQKERNSRPKFDEIVNMLDKLIR 286
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 126/293 (43%), Gaps = 42/293 (14%)
Query: 517 IGAGMLGSVYRAQ---LPD--GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+G G GSV + L D G L+AVK+L QQ+D F + + + IV+
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRD--FQREIQILKALHSDFIVK 72
Query: 572 LKG--YCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
+G Y + L+ EY +G L+D L R R L A+R L Y +
Sbjct: 73 YRGVSYGPGRPELRLVMEYLPSGCLRDFLQ-------------RHRARLDASRLLLYSSQ 119
Query: 630 ICQ-------PPIVHRNFKSANIXXXXXXAVSVSDCGLA---PLISSGSVSQLSGHLLTA 679
IC+ VHR+ + NI V ++D GLA PL V + G
Sbjct: 120 ICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQS-PI 178
Query: 680 YGYGAPEFESGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDA 739
+ Y I++ QSDV+SFGVV+ EL T D++ + +FL + D+ A
Sbjct: 179 FWYAPESLSDNIFSRQSDVWSFGVVLYELFT---YCDKSCSPSAEFLRMMGCER--DVPA 233
Query: 740 LSRMVDPSLSGQY---PAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMI 789
L R+++ GQ P + +++ C P+ RP S + L DM+
Sbjct: 234 LCRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQL-DML 285
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 130/333 (39%), Gaps = 45/333 (13%)
Query: 479 EGTAVKTSTKTAKPFTTARSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQL-----PDG 533
EG + T P+ F +LQ F + +GAG G V A D
Sbjct: 23 EGNSYTFIDPTQLPYNEKWEFPRNNLQ-----FGKT--LGAGAFGKVVEATAFGLGKEDA 75
Query: 534 KL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNG 592
L +AVK L A + +K+ EL +H NIV L G C G L+I EYC G
Sbjct: 76 VLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYG 135
Query: 593 TLQDMLHS------DDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIX 646
L + L D E L + + A+ + +L +HR+ + N+
Sbjct: 136 DLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVL 192
Query: 647 XXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE--FESGIYTCQSDVYSFGVV 704
+ D GLA I + S + G+ + APE F+ +YT QSDV+S+G++
Sbjct: 193 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDC-VYTVQSDVWSYGIL 251
Query: 705 MLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSLSGQYPAKSLSHFADI 763
+ E+ + G Y P + ++V PA + + I
Sbjct: 252 LWEIFSLGLNPY----------------PGILVNSKFYKLVKDGYQMAQPAFAPKNIYSI 295
Query: 764 ISRCVQSEPEFRPPMSEV---VQDLVDMIRRER 793
+ C EP RP ++ +Q+ RRER
Sbjct: 296 MQACWALEPTHRPTFQQICSFLQEQAQEDRRER 328
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 123/295 (41%), Gaps = 50/295 (16%)
Query: 517 IGAGMLGSVYRAQL--------PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIR--- 565
+G G G V A+ + +AVK L A+ + D LV+ ++ ++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD----LVSEMEMMKMIG 98
Query: 566 -HANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHS------------DDELKNNLSWNT 612
H NI+ L G C + G +I EY S G L++ L + + + +++
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 613 RIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQL 672
+ AR +EYL +HR+ + N+ + ++D GLA I++ +
Sbjct: 159 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKK 215
Query: 673 SGHLLTAYGYGAPE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWA 730
+ + + APE +YT QSDV+SFGV+M E+ T G Y
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP-------------G 262
Query: 731 IPQLHDIDALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDL 785
IP ++ L +++ PA + ++ C + P RP ++V+DL
Sbjct: 263 IP----VEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 128/293 (43%), Gaps = 42/293 (14%)
Query: 517 IGAGMLGSVYRAQ---LPD--GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+G G GSV + L D G L+AVK+L QQ+D F + + + IV+
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRD--FQREIQILKALHSDFIVK 75
Query: 572 LKGYCAEHGQR--LLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
+G G++ L+ EY +G L+D L R R L A+R L Y +
Sbjct: 76 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQ-------------RHRARLDASRLLLYSSQ 122
Query: 630 ICQ-------PPIVHRNFKSANIXXXXXXAVSVSDCGLA---PLISSGSVSQLSGHLLTA 679
IC+ VHR+ + NI V ++D GLA PL V + G
Sbjct: 123 ICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQS-PI 181
Query: 680 YGYGAPEFESGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDA 739
+ Y I++ QSDV+SFGVV+ EL T D++ + +FL + D+ A
Sbjct: 182 FWYAPESLSDNIFSRQSDVWSFGVVLYELFT---YCDKSCSPSAEFLR--MMGSERDVPA 236
Query: 740 LSRMVDPSLSGQY---PAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMI 789
LSR+++ GQ P + +++ C P+ RP S + L DM+
Sbjct: 237 LSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQL-DML 288
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 122/275 (44%), Gaps = 27/275 (9%)
Query: 515 NLIGAGMLGSVYRA-QLPDGKLLAVK---KLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
++G+G+ G+V++ +P+G+ + + K+ + S +Q + + I + HA+IV
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 571 ELKGYCAEHGQRL-LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
L G C G L L+ +Y G+L D + + L + + A+ + YL E
Sbjct: 79 RLLGLCP--GSSLQLVTQYLPLGSLLDHVRQH---RGALGPQLLLNWGVQIAKGMYYLEE 133
Query: 630 ICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FE 688
+VHRN + N+ V V+D G+A L+ L T + A E
Sbjct: 134 HG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIH 190
Query: 689 SGIYTCQSDVYSFGVVMLELLT-GRKSYDRTR--------NRGEQFLVRWAIPQLHDIDA 739
G YT QSDV+S+GV + EL+T G + Y R +GE R A PQ+ ID
Sbjct: 191 FGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGE----RLAQPQICTIDV 246
Query: 740 LSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEF 774
MV + + + A+ +R + P +
Sbjct: 247 YMVMVKCWMIDENIRPTFKELANEFTRMARDPPRY 281
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 123/295 (41%), Gaps = 50/295 (16%)
Query: 517 IGAGMLGSVYRAQL--------PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIR--- 565
+G G G V A+ + +AVK L A+ + D LV+ ++ ++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD----LVSEMEMMKMIG 98
Query: 566 -HANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHS------------DDELKNNLSWNT 612
H NI+ L G C + G +I EY S G L++ L + + + +++
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 613 RIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQL 672
+ AR +EYL +HR+ + N+ + ++D GLA I++ +
Sbjct: 159 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKN 215
Query: 673 SGHLLTAYGYGAPE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWA 730
+ + + APE +YT QSDV+SFGV+M E+ T G Y
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP-------------G 262
Query: 731 IPQLHDIDALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDL 785
IP ++ L +++ PA + ++ C + P RP ++V+DL
Sbjct: 263 IP----VEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 115/294 (39%), Gaps = 39/294 (13%)
Query: 517 IGAGMLGSVYRA------QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G V A + + +AVK L + A+ + EL I H N+V
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 571 ELKGYCAEHGQRLL-IYEYCSNGTLQDMLHS-----------DDELKNNLSWNTRIRMAL 618
L G C + G L+ I E+C G L L S +D K+ L+ I +
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 619 GAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLT 678
A+ +E+L +HR+ + NI V + D GLA I G
Sbjct: 156 QVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 679 AYGYGAPE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHD 736
+ APE +YT QSDV+SFGV++ E+ + G Y P +
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY----------------PGVKI 256
Query: 737 IDALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIR 790
+ R + + P + + C EP RP SE+V+ L ++++
Sbjct: 257 DEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 310
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 128/330 (38%), Gaps = 42/330 (12%)
Query: 479 EGTAVKTSTKTAKPFTTARSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQL-----PDG 533
EG + T P+ F +LQ F + +GAG G V A D
Sbjct: 15 EGNSYTFIDPTQLPYNEKWEFPRNNLQ-----FGKT--LGAGAFGKVVEATAFGLGKEDA 67
Query: 534 KL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNG 592
L +AVK L A + +K+ EL +H NIV L G C G L+I EYC G
Sbjct: 68 VLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYG 127
Query: 593 TLQDMLHS------DDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIX 646
L + L D E L + + A+ + +L +HR+ + N+
Sbjct: 128 DLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVL 184
Query: 647 XXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE--FESGIYTCQSDVYSFGVV 704
+ D GLA I + S + G+ + APE F+ +YT QSDV+S+G++
Sbjct: 185 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDC-VYTVQSDVWSYGIL 243
Query: 705 MLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSLSGQYPAKSLSHFADI 763
+ E+ + G Y P + ++V PA + + I
Sbjct: 244 LWEIFSLGLNPY----------------PGILVNSKFYKLVKDGYQMAQPAFAPKNIYSI 287
Query: 764 ISRCVQSEPEFRPPMSEVVQDLVDMIRRER 793
+ C EP RP ++ L + + +R
Sbjct: 288 MQACWALEPTHRPTFQQICSFLQEQAQEDR 317
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 113/266 (42%), Gaps = 38/266 (14%)
Query: 536 LAVKKLDKRASSQQKDDEF--LELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGT 593
+AVK L A+ + D +E++ I + H NI+ L G C + G +I EY S G
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGN 120
Query: 594 LQDMLHSDD----ELKNNLSWNTR--------IRMALGAARALEYLHEICQPPIVHRNFK 641
L++ L + + E N S N + A AR +EYL +HR+
Sbjct: 121 LREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLA 177
Query: 642 SANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FESGIYTCQSDVYS 700
+ N+ + ++D GLA I + + + + APE IYT QSDV+S
Sbjct: 178 ARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWS 237
Query: 701 FGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSLSGQYPAKSLSH 759
FGV++ E+ T G Y +P ++ L +++ P+ +
Sbjct: 238 FGVLLWEIFTLGGSPYP-------------GVP----VEELFKLLKEGHRMDKPSNCTNE 280
Query: 760 FADIISRCVQSEPEFRPPMSEVVQDL 785
++ C + P RP ++V+DL
Sbjct: 281 LYMMMRDCWHAVPSQRPTFKQLVEDL 306
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 115/295 (38%), Gaps = 40/295 (13%)
Query: 517 IGAGMLGSVYRA------QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G V A + + +AVK L + A+ + EL I H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 571 ELKGYCAEHGQRLL-IYEYCSNGTLQDMLHS------------DDELKNNLSWNTRIRMA 617
L G C + G L+ I E+C G L L S +D K+ L+ I +
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 618 LGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLL 677
A+ +E+L +HR+ + NI V + D GLA I G
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 678 TAYGYGAPE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLH 735
+ APE +YT QSDV+SFGV++ E+ + G Y P +
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY----------------PGVK 246
Query: 736 DIDALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIR 790
+ R + + P + + C EP RP SE+V+ L ++++
Sbjct: 247 IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 301
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 120/284 (42%), Gaps = 46/284 (16%)
Query: 536 LAVKKLDKRASSQQKDDEF--LELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGT 593
+AVK L A+ + D +E++ I + H NI+ L G C + G +I EY S G
Sbjct: 104 VAVKMLKSDATEKDLSDLISEMEMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGN 161
Query: 594 LQDML---------------HSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHR 638
L++ L H+ +E LS + A AR +EYL +HR
Sbjct: 162 LREYLQARRPPGLEYSYNPSHNPEE---QLSSKDLVSCAYQVARGMEYL---ASKKCIHR 215
Query: 639 NFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FESGIYTCQSD 697
+ + N+ + ++D GLA I + + + + APE IYT QSD
Sbjct: 216 DLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 275
Query: 698 VYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSLSGQYPAKS 756
V+SFGV++ E+ T G Y +P ++ L +++ P+
Sbjct: 276 VWSFGVLLWEIFTLGGSPYP-------------GVP----VEELFKLLKEGHRMDKPSNC 318
Query: 757 LSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIRRERCSNESLG 800
+ ++ C + P RP ++V+DL ++ SN+ +G
Sbjct: 319 TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV--ALTSNQEMG 360
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 114/291 (39%), Gaps = 36/291 (12%)
Query: 517 IGAGMLGSVYRA------QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G V A + + +AVK L + A+ + EL I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 571 ELKGYCAEHGQRLL-IYEYCSNGTLQDMLHSD--------DELKNNLSWNTRIRMALGAA 621
L G C + G L+ I E+C G L L S D K+ L+ I + A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 622 RALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYG 681
+ +E+L +HR+ + NI V + D GLA I G
Sbjct: 155 KGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 682 YGAPE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDA 739
+ APE +YT QSDV+SFGV++ E+ + G Y P + +
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY----------------PGVKIDEE 255
Query: 740 LSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIR 790
R + + P + + C EP RP SE+V+ L ++++
Sbjct: 256 FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 306
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 115/295 (38%), Gaps = 40/295 (13%)
Query: 517 IGAGMLGSVYRA------QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G V A + + +AVK L + A+ + EL I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 571 ELKGYCAEHGQRLL-IYEYCSNGTLQDMLHS------------DDELKNNLSWNTRIRMA 617
L G C + G L+ I E+C G L L S +D K+ L+ I +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 618 LGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLL 677
A+ +E+L +HR+ + NI V + D GLA I G
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 678 TAYGYGAPE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLH 735
+ APE +YT QSDV+SFGV++ E+ + G Y P +
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY----------------PGVK 255
Query: 736 DIDALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIR 790
+ R + + P + + C EP RP SE+V+ L ++++
Sbjct: 256 IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 310
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 113/269 (42%), Gaps = 44/269 (16%)
Query: 536 LAVKKLDKRASSQQKDDEF--LELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGT 593
+AVK L A+ + D +E++ I + H NI+ L G C + G +I EY S G
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGN 120
Query: 594 LQDML---------------HSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHR 638
L++ L H+ +E LS + A AR +EYL +HR
Sbjct: 121 LREYLQARRPPGLEFSFNPSHNPEE---QLSSKDLVSCAYQVARGMEYL---ASKKCIHR 174
Query: 639 NFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FESGIYTCQSD 697
+ + N+ + ++D GLA I + + + + APE IYT QSD
Sbjct: 175 DLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSD 234
Query: 698 VYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSLSGQYPAKS 756
V+SFGV++ E+ T G Y +P ++ L +++ P+
Sbjct: 235 VWSFGVLLWEIFTLGGSPYP-------------GVP----VEELFKLLKEGHRMDKPSNC 277
Query: 757 LSHFADIISRCVQSEPEFRPPMSEVVQDL 785
+ ++ C + P RP ++V+DL
Sbjct: 278 TNELYMMMRDCWHAVPSQRPTFKQLVEDL 306
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 115/295 (38%), Gaps = 40/295 (13%)
Query: 517 IGAGMLGSVYRA------QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G V A + + +AVK L + A+ + EL I H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 571 ELKGYCAEHGQRLL-IYEYCSNGTLQDMLHS------------DDELKNNLSWNTRIRMA 617
L G C + G L+ I E+C G L L S +D K+ L+ I +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 618 LGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLL 677
A+ +E+L +HR+ + NI V + D GLA I G
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 678 TAYGYGAPE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLH 735
+ APE +YT QSDV+SFGV++ E+ + G Y P +
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY----------------PGVK 246
Query: 736 DIDALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIR 790
+ R + + P + + C EP RP SE+V+ L ++++
Sbjct: 247 IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 301
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 127/293 (43%), Gaps = 42/293 (14%)
Query: 517 IGAGMLGSVYRAQ---LPD--GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+G G GSV + L D G L+AVK+L QQ+D F + + + IV+
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRD--FQREIQILKALHSDFIVK 76
Query: 572 LKGYCAEHGQR--LLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
+G G++ L+ EY +G L+D L R R L A+R L Y +
Sbjct: 77 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQ-------------RHRARLDASRLLLYSSQ 123
Query: 630 ICQ-------PPIVHRNFKSANIXXXXXXAVSVSDCGLA---PLISSGSVSQLSGHLLTA 679
IC+ VHR+ + NI V ++D GLA PL V + G
Sbjct: 124 ICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQS-PI 182
Query: 680 YGYGAPEFESGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDA 739
+ Y I++ QSDV+SFGVV+ EL T D++ + +FL + D+ A
Sbjct: 183 FWYAPESLSDNIFSRQSDVWSFGVVLYELFT---YCDKSCSPSAEFLRMMGCER--DVPA 237
Query: 740 LSRMVDPSLSGQY---PAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMI 789
L R+++ GQ P + +++ C P+ RP S + L DM+
Sbjct: 238 LCRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQL-DML 289
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 119/299 (39%), Gaps = 42/299 (14%)
Query: 517 IGAGMLGSVYRAQL-----PDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+GAG G V A D L +AVK L A + +K+ EL +H NIV
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDEL----------KNNLSWNTRIRMALGA 620
L G C G L+I EYC G L + L + + LS + +
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQV 173
Query: 621 ARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAY 680
A+ + +L +HR+ + N+ + D GLA I + S + G+
Sbjct: 174 AQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 230
Query: 681 GYGAPE--FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDI 737
+ APE F+ +YT QSDV+S+G+++ E+ + G Y P +
Sbjct: 231 KWMAPESIFDC-VYTVQSDVWSYGILLWEIFSLGLNPY----------------PGILVN 273
Query: 738 DALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEV---VQDLVDMIRRER 793
++V PA + + I+ C EP RP ++ +Q+ RRER
Sbjct: 274 SKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQEDRRER 332
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 92/195 (47%), Gaps = 10/195 (5%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
+GAG G V+ + +AVK L S Q FLE N + ++H +V L
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQA---FLEEANLMKTLQHDKLVRLYAVV 76
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ +I E+ + G+L D L SD+ K L ++ +A+ E + I + +
Sbjct: 77 TKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLP-----KLIDFSAQIAEGMAYIERKNYI 131
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FESGIYTCQ 695
HR+ ++AN+ ++D GLA +I + G + APE G +T +
Sbjct: 132 HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPI-KWTAPEAINFGCFTIK 190
Query: 696 SDVYSFGVVMLELLT 710
S+V+SFG+++ E++T
Sbjct: 191 SNVWSFGILLYEIVT 205
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 93/207 (44%), Gaps = 12/207 (5%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
+G G G V+ +A+K L S + FLE + +++H +V+L
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMS---PESFLEEAQIMKKLKHDKLVQLYAVV 73
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+E ++ EY + G+L D L + L + MA A + Y+ + +
Sbjct: 74 SEE-PIYIVTEYMNKGSLLDFLKDGE--GRALKLPNLVDMAAQVAAGMAYIERMN---YI 127
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFE-SGIYTCQ 695
HR+ +SANI ++D GLA LI + G + APE G +T +
Sbjct: 128 HRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPI-KWTAPEAALYGRFTIK 186
Query: 696 SDVYSFGVVMLELLT-GRKSYDRTRNR 721
SDV+SFG+++ EL+T GR Y NR
Sbjct: 187 SDVWSFGILLTELVTKGRVPYPGMNNR 213
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 115/295 (38%), Gaps = 40/295 (13%)
Query: 517 IGAGMLGSVYRA------QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G V A + + +AVK L + A+ + EL I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 571 ELKGYCAEHGQRLL-IYEYCSNGTLQDMLHS------------DDELKNNLSWNTRIRMA 617
L G C + G L+ I E+C G L L S +D K+ L+ I +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 618 LGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLL 677
A+ +E+L +HR+ + NI V + D GLA I G
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDAR 211
Query: 678 TAYGYGAPE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLH 735
+ APE +YT QSDV+SFGV++ E+ + G Y P +
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY----------------PGVK 255
Query: 736 DIDALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIR 790
+ R + + P + + C EP RP SE+V+ L ++++
Sbjct: 256 IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 310
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 101/208 (48%), Gaps = 26/208 (12%)
Query: 517 IGAGMLGSV----YRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL 572
IG G G V YR G +AVK + A++Q FL + + ++RH+N+V+L
Sbjct: 20 IGKGEFGDVMLGDYR-----GNKVAVKCIKNDATAQA----FLAEASVMTQLRHSNLVQL 70
Query: 573 KGYCAEH-GQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEIC 631
G E G ++ EY + G+L D L S ++ L + ++ +L A+EYL
Sbjct: 71 LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRG--RSVLGGDCLLKFSLDVCEAMEYLE--- 125
Query: 632 QPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FESG 690
VHR+ + N+ VSD GL SS +Q +G L + APE
Sbjct: 126 GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS---TQDTGKLPVK--WTAPEALREA 180
Query: 691 IYTCQSDVYSFGVVMLELLT-GRKSYDR 717
++ +SDV+SFG+++ E+ + GR Y R
Sbjct: 181 AFSTKSDVWSFGILLWEIYSFGRVPYPR 208
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 115/295 (38%), Gaps = 40/295 (13%)
Query: 517 IGAGMLGSVYRA------QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G V A + + +AVK L + A+ + EL I H N+V
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 571 ELKGYCAEHGQRLL-IYEYCSNGTLQDMLHS------------DDELKNNLSWNTRIRMA 617
L G C + G L+ I E+C G L L S +D K+ L+ I +
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 618 LGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLL 677
A+ +E+L +HR+ + NI V + D GLA I G
Sbjct: 192 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 248
Query: 678 TAYGYGAPE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLH 735
+ APE +YT QSDV+SFGV++ E+ + G Y P +
Sbjct: 249 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY----------------PGVK 292
Query: 736 DIDALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIR 790
+ R + + P + + C EP RP SE+V+ L ++++
Sbjct: 293 IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 347
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 113/269 (42%), Gaps = 44/269 (16%)
Query: 536 LAVKKLDKRASSQQKDDEF--LELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGT 593
+AVK L A+ + D +E++ I + H NI+ L G C + G +I EY S G
Sbjct: 52 VAVKMLKSDATEKDLSDLISEMEMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGN 109
Query: 594 LQDML---------------HSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHR 638
L++ L H+ +E LS + A AR +EYL +HR
Sbjct: 110 LREYLQARRPPGLEYSYNPSHNPEE---QLSSKDLVSCAYQVARGMEYL---ASKKCIHR 163
Query: 639 NFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FESGIYTCQSD 697
+ + N+ + ++D GLA I + + + + APE IYT QSD
Sbjct: 164 DLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 223
Query: 698 VYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSLSGQYPAKS 756
V+SFGV++ E+ T G Y +P ++ L +++ P+
Sbjct: 224 VWSFGVLLWEIFTLGGSPYP-------------GVP----VEELFKLLKEGHRMDKPSNC 266
Query: 757 LSHFADIISRCVQSEPEFRPPMSEVVQDL 785
+ ++ C + P RP ++V+DL
Sbjct: 267 TNELYMMMRDCWHAVPSQRPTFKQLVEDL 295
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 130/290 (44%), Gaps = 32/290 (11%)
Query: 509 NSFSQENLIGAGMLGSVYRAQL-PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+ + + +IG+G V A P + +A+K+++ Q DE L+ + + + H
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLE-KCQTSMDELLKEIQAMSQCHHP 68
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLH---SDDELKNNLSWNTRIRMALGAA-RA 623
NIV + L+ + S G++ D++ + E K+ + + I L
Sbjct: 69 NIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEG 128
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSG---SVSQLSGHLLTAY 680
LEYLH+ Q +HR+ K+ NI +V ++D G++ +++G + +++ +
Sbjct: 129 LEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTP 185
Query: 681 GYGAPEFESGI--YTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDID 738
+ APE + Y ++D++SFG+ +EL TG Y + P + +
Sbjct: 186 CWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHK-------------YPPMKVLM 232
Query: 739 ALSRMVDPSLSGQYPAKSL-----SHFADIISRCVQSEPEFRPPMSEVVQ 783
+ PSL K + F +IS C+Q +PE RP +E+++
Sbjct: 233 LTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 282
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 118/299 (39%), Gaps = 42/299 (14%)
Query: 517 IGAGMLGSVYRAQL-----PDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+GAG G V A D L +AVK L A + +K+ EL +H NIV
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
L G C G L+I EYC G L + L + L + +A A + LH
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRV---LETDPAFAIANSTASTRDLLHFS 170
Query: 631 CQPP----------IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAY 680
Q +HR+ + N+ + D GLA I + S + G+
Sbjct: 171 SQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 230
Query: 681 GYGAPE--FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDI 737
+ APE F+ +YT QSDV+S+G+++ E+ + G Y P +
Sbjct: 231 KWMAPESIFDC-VYTVQSDVWSYGILLWEIFSLGLNPY----------------PGILVN 273
Query: 738 DALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEV---VQDLVDMIRRER 793
++V PA + + I+ C EP RP ++ +Q+ RRER
Sbjct: 274 SKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQEDRRER 332
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 113/269 (42%), Gaps = 44/269 (16%)
Query: 536 LAVKKLDKRASSQQKDDEF--LELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGT 593
+AVK L A+ + D +E++ I + H NI+ L G C + G +I EY S G
Sbjct: 48 VAVKMLKSDATEKDLSDLISEMEMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGN 105
Query: 594 LQDML---------------HSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHR 638
L++ L H+ +E LS + A AR +EYL +HR
Sbjct: 106 LREYLQARRPPGLEYCYNPSHNPEE---QLSSKDLVSCAYQVARGMEYL---ASKKCIHR 159
Query: 639 NFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FESGIYTCQSD 697
+ + N+ + ++D GLA I + + + + APE IYT QSD
Sbjct: 160 DLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 219
Query: 698 VYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSLSGQYPAKS 756
V+SFGV++ E+ T G Y +P ++ L +++ P+
Sbjct: 220 VWSFGVLLWEIFTLGGSPYP-------------GVP----VEELFKLLKEGHRMDKPSNC 262
Query: 757 LSHFADIISRCVQSEPEFRPPMSEVVQDL 785
+ ++ C + P RP ++V+DL
Sbjct: 263 TNELYMMMRDCWHAVPSQRPTFKQLVEDL 291
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 113/269 (42%), Gaps = 44/269 (16%)
Query: 536 LAVKKLDKRASSQQKDDEF--LELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGT 593
+AVK L A+ + D +E++ I + H NI+ L G C + G +I EY S G
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGN 120
Query: 594 LQDML---------------HSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHR 638
L++ L H+ +E LS + A AR +EYL +HR
Sbjct: 121 LREYLQARRPPGLEYSYNPSHNPEE---QLSSKDLVSCAYQVARGMEYL---ASKKCIHR 174
Query: 639 NFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FESGIYTCQSD 697
+ + N+ + ++D GLA I + + + + APE IYT QSD
Sbjct: 175 DLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 234
Query: 698 VYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSLSGQYPAKS 756
V+SFGV++ E+ T G Y +P ++ L +++ P+
Sbjct: 235 VWSFGVLLWEIFTLGGSPYP-------------GVP----VEELFKLLKEGHRMDKPSNC 277
Query: 757 LSHFADIISRCVQSEPEFRPPMSEVVQDL 785
+ ++ C + P RP ++V+DL
Sbjct: 278 TNELYMMMRDCWHAVPSQRPTFKQLVEDL 306
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 115/295 (38%), Gaps = 40/295 (13%)
Query: 517 IGAGMLGSVYRA------QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G V A + + +AVK L + A+ + EL I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 571 ELKGYCAEHGQRLL-IYEYCSNGTLQDMLHS------------DDELKNNLSWNTRIRMA 617
L G C + G L+ I E+C G L L S +D K+ L+ I +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 618 LGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLL 677
A+ +E+L +HR+ + NI V + D GLA I G
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 211
Query: 678 TAYGYGAPE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLH 735
+ APE +YT QSDV+SFGV++ E+ + G Y P +
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY----------------PGVK 255
Query: 736 DIDALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIR 790
+ R + + P + + C EP RP SE+V+ L ++++
Sbjct: 256 IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 310
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 130/290 (44%), Gaps = 32/290 (11%)
Query: 509 NSFSQENLIGAGMLGSVYRAQL-PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+ + + +IG+G V A P + +A+K+++ Q DE L+ + + + H
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLE-KCQTSMDELLKEIQAMSQCHHP 73
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLH---SDDELKNNLSWNTRIRMALGAA-RA 623
NIV + L+ + S G++ D++ + E K+ + + I L
Sbjct: 74 NIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEG 133
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSG---SVSQLSGHLLTAY 680
LEYLH+ Q +HR+ K+ NI +V ++D G++ +++G + +++ +
Sbjct: 134 LEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTP 190
Query: 681 GYGAPEFESGI--YTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDID 738
+ APE + Y ++D++SFG+ +EL TG Y + P + +
Sbjct: 191 CWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHK-------------YPPMKVLM 237
Query: 739 ALSRMVDPSLSGQYPAKSL-----SHFADIISRCVQSEPEFRPPMSEVVQ 783
+ PSL K + F +IS C+Q +PE RP +E+++
Sbjct: 238 LTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 115/295 (38%), Gaps = 40/295 (13%)
Query: 517 IGAGMLGSVYRA------QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G V A + + +AVK L + A+ + EL I H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 571 ELKGYCAEHGQRLL-IYEYCSNGTLQDMLHS------------DDELKNNLSWNTRIRMA 617
L G C + G L+ I E+C G L L S +D K+ L+ I +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 618 LGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLL 677
A+ +E+L +HR+ + NI V + D GLA I G
Sbjct: 157 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 213
Query: 678 TAYGYGAPE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLH 735
+ APE +YT QSDV+SFGV++ E+ + G Y P +
Sbjct: 214 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY----------------PGVK 257
Query: 736 DIDALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIR 790
+ R + + P + + C EP RP SE+V+ L ++++
Sbjct: 258 IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 312
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 113/269 (42%), Gaps = 44/269 (16%)
Query: 536 LAVKKLDKRASSQQKDDEF--LELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGT 593
+AVK L A+ + D +E++ I + H NI+ L G C + G +I EY S G
Sbjct: 55 VAVKMLKSDATEKDLSDLISEMEMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGN 112
Query: 594 LQDML---------------HSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHR 638
L++ L H+ +E LS + A AR +EYL +HR
Sbjct: 113 LREYLQARRPPGLEYSYNPSHNPEE---QLSSKDLVSCAYQVARGMEYL---ASKKCIHR 166
Query: 639 NFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FESGIYTCQSD 697
+ + N+ + ++D GLA I + + + + APE IYT QSD
Sbjct: 167 DLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 226
Query: 698 VYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSLSGQYPAKS 756
V+SFGV++ E+ T G Y +P ++ L +++ P+
Sbjct: 227 VWSFGVLLWEIFTLGGSPYP-------------GVP----VEELFKLLKEGHRMDKPSNC 269
Query: 757 LSHFADIISRCVQSEPEFRPPMSEVVQDL 785
+ ++ C + P RP ++V+DL
Sbjct: 270 TNELYMMMRDCWHAVPSQRPTFKQLVEDL 298
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 115/295 (38%), Gaps = 40/295 (13%)
Query: 517 IGAGMLGSVYRA------QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G V A + + +AVK L + A+ + EL I H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 571 ELKGYCAEHGQRLL-IYEYCSNGTLQDMLHS------------DDELKNNLSWNTRIRMA 617
L G C + G L+ I E+C G L L S +D K+ L+ I +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 618 LGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLL 677
A+ +E+L +HR+ + NI V + D GLA I G
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 678 TAYGYGAPE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLH 735
+ APE +YT QSDV+SFGV++ E+ + G Y P +
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY----------------PGVK 246
Query: 736 DIDALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIR 790
+ R + + P + + C EP RP SE+V+ L ++++
Sbjct: 247 IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 301
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 113/269 (42%), Gaps = 44/269 (16%)
Query: 536 LAVKKLDKRASSQQKDDEF--LELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGT 593
+AVK L A+ + D +E++ I + H NI+ L G C + G +I EY S G
Sbjct: 56 VAVKMLKSDATEKDLSDLISEMEMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGN 113
Query: 594 LQDML---------------HSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHR 638
L++ L H+ +E LS + A AR +EYL +HR
Sbjct: 114 LREYLQARRPPGLEYSYNPSHNPEE---QLSSKDLVSCAYQVARGMEYL---ASKKCIHR 167
Query: 639 NFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FESGIYTCQSD 697
+ + N+ + ++D GLA I + + + + APE IYT QSD
Sbjct: 168 DLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 227
Query: 698 VYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSLSGQYPAKS 756
V+SFGV++ E+ T G Y +P ++ L +++ P+
Sbjct: 228 VWSFGVLLWEIFTLGGSPYP-------------GVP----VEELFKLLKEGHRMDKPSNC 270
Query: 757 LSHFADIISRCVQSEPEFRPPMSEVVQDL 785
+ ++ C + P RP ++V+DL
Sbjct: 271 TNELYMMMRDCWHAVPSQRPTFKQLVEDL 299
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 126/285 (44%), Gaps = 33/285 (11%)
Query: 514 ENLIGAGMLGSVY--RAQLPDGK--LLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
E +IGAG G V R +LP + +A+K L + +Q+ D FL + + + H N+
Sbjct: 48 ERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRD-FLCEASIMGQFDHPNV 106
Query: 570 VELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
V L+G +++ E+ NG L L D + + M G A + YL +
Sbjct: 107 VHLEGVVTRGKPVMIVIEFMENGALDAFLRKHD---GQFTVIQLVGMLRGIAAGMRYLAD 163
Query: 630 ICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSG--SVSQLSGHLLTAYGYGAPE- 686
+ VHR+ + NI VSD GL+ +I +V +G + + APE
Sbjct: 164 M---GYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVR-WTAPEA 219
Query: 687 FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVD 745
+ +T SDV+S+G+VM E+++ G + Y N Q +++ AI + + + A
Sbjct: 220 IQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN---QDVIK-AIEEGYRLPA------ 269
Query: 746 PSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIR 790
P + ++ C Q E RP ++V L MIR
Sbjct: 270 -------PMDCPAGLHQLMLDCWQKERAERPKFEQIVGILDKMIR 307
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 115/295 (38%), Gaps = 40/295 (13%)
Query: 517 IGAGMLGSVYRA------QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G V A + + +AVK L + A+ + EL I H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 571 ELKGYCAEHGQRLL-IYEYCSNGTLQDMLHS------------DDELKNNLSWNTRIRMA 617
L G C + G L+ I E+C G L L S +D K+ L+ I +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 618 LGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLL 677
A+ +E+L +HR+ + NI V + D GLA I G
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 678 TAYGYGAPE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLH 735
+ APE +YT QSDV+SFGV++ E+ + G Y P +
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY----------------PGVK 246
Query: 736 DIDALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIR 790
+ R + + P + + C EP RP SE+V+ L ++++
Sbjct: 247 IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 301
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 124/271 (45%), Gaps = 33/271 (12%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
+G G GSVY+A G+++A+K++ + Q E ++ ++ + + ++V+ G
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQ----EIIKEISIMQQCDSPHVVKYYGS 92
Query: 576 CAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAA-RALEYLHEICQPP 634
++ ++ EYC G++ D++ L+N I L + + LEYLH + +
Sbjct: 93 YFKNTDLWIVMEYCGAGSVSDIIR----LRNKTLTEDEIATILQSTLKGLEYLHFMRK-- 146
Query: 635 IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESGI-YT 693
+HR+ K+ NI ++D G+A ++ + ++ + APE I Y
Sbjct: 147 -IHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKR--NXVIGTPFWMAPEVIQEIGYN 203
Query: 694 CQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRM-VDPSLSGQY 752
C +D++S G+ +E+ G+ Y +H + A+ + +P + +
Sbjct: 204 CVADIWSLGITAIEMAEGKPPY----------------ADIHPMRAIFMIPTNPPPTFRK 247
Query: 753 PAKSLSHFADIISRCVQSEPEFRPPMSEVVQ 783
P +F D + +C+ PE R ++++Q
Sbjct: 248 PELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 113/269 (42%), Gaps = 44/269 (16%)
Query: 536 LAVKKLDKRASSQQKDDEF--LELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGT 593
+AVK L A+ + D +E++ I + H NI+ L G C + G +I EY S G
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGN 120
Query: 594 LQDML---------------HSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHR 638
L++ L H+ +E LS + A AR +EYL +HR
Sbjct: 121 LREYLQARRPPGLEYCYNPSHNPEE---QLSSKDLVSCAYQVARGMEYL---ASKKCIHR 174
Query: 639 NFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FESGIYTCQSD 697
+ + N+ + ++D GLA I + + + + APE IYT QSD
Sbjct: 175 DLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 234
Query: 698 VYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSLSGQYPAKS 756
V+SFGV++ E+ T G Y +P ++ L +++ P+
Sbjct: 235 VWSFGVLLWEIFTLGGSPYP-------------GVP----VEELFKLLKEGHRMDKPSNC 277
Query: 757 LSHFADIISRCVQSEPEFRPPMSEVVQDL 785
+ ++ C + P RP ++V+DL
Sbjct: 278 TNELYMMMRDCWHAVPSQRPTFKQLVEDL 306
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 122/295 (41%), Gaps = 50/295 (16%)
Query: 517 IGAGMLGSVYRAQL--------PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIR--- 565
+G G G V A+ + +AVK L A+ + D LV+ ++ ++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD----LVSEMEMMKMIG 98
Query: 566 -HANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHS------------DDELKNNLSWNT 612
H NI+ L G C + G +I Y S G L++ L + + + +++
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 613 RIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQL 672
+ AR +EYL +HR+ + N+ + ++D GLA I++ +
Sbjct: 159 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 673 SGHLLTAYGYGAPE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWA 730
+ + + APE +YT QSDV+SFGV+M E+ T G Y
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP-------------G 262
Query: 731 IPQLHDIDALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDL 785
IP ++ L +++ PA + ++ C + P RP ++V+DL
Sbjct: 263 IP----VEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 124/291 (42%), Gaps = 35/291 (12%)
Query: 509 NSFSQENLIGAGMLGSVY--RAQLPDGKLL--AVKKLDKRASSQQKDDEFLELVNNIDRI 564
+ S + ++GAG G V R +LP K + A+K L + +Q+ D FL + + +
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD-FLGEASIMGQF 103
Query: 565 RHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARAL 624
H NI+ L+G + +++ EY NG+L L D + + M G A +
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA---QFTVIQLVGMLRGIASGM 160
Query: 625 EYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS---SGSVSQLSGHLLTAYG 681
+YL ++ VHR+ + NI VSD GLA ++ + + G +
Sbjct: 161 KYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKI--PIR 215
Query: 682 YGAPE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDA 739
+ +PE +T SDV+S+G+V+ E+++ G + Y W + I A
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------WEMSNQDVIKA 262
Query: 740 LSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIR 790
VD P + ++ C Q + RP ++V L +IR
Sbjct: 263 ----VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 101/208 (48%), Gaps = 26/208 (12%)
Query: 517 IGAGMLGSV----YRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL 572
IG G G V YR G +AVK + A++Q FL + + ++RH+N+V+L
Sbjct: 14 IGKGEFGDVMLGDYR-----GNKVAVKCIKNDATAQA----FLAEASVMTQLRHSNLVQL 64
Query: 573 KGYCAEH-GQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEIC 631
G E G ++ EY + G+L D L S ++ L + ++ +L A+EYL
Sbjct: 65 LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRG--RSVLGGDCLLKFSLDVCEAMEYLE--- 119
Query: 632 QPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FESG 690
VHR+ + N+ VSD GL SS +Q +G L + APE
Sbjct: 120 GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS---TQDTGKL--PVKWTAPEALREK 174
Query: 691 IYTCQSDVYSFGVVMLELLT-GRKSYDR 717
++ +SDV+SFG+++ E+ + GR Y R
Sbjct: 175 KFSTKSDVWSFGILLWEIYSFGRVPYPR 202
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 122/295 (41%), Gaps = 50/295 (16%)
Query: 517 IGAGMLGSVYRAQL--------PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIR--- 565
+G G G V A+ + +AVK L A+ + D LV+ ++ ++
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSD----LVSEMEMMKMIG 98
Query: 566 -HANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHS------------DDELKNNLSWNT 612
H NI+ L G C + G +I Y S G L++ L + + + +++
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 613 RIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQL 672
+ AR +EYL +HR+ + N+ + ++D GLA I++ +
Sbjct: 159 LVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 673 SGHLLTAYGYGAPE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWA 730
+ + + APE +YT QSDV+SFGV+M E+ T G Y
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP-------------G 262
Query: 731 IPQLHDIDALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDL 785
IP ++ L +++ PA + ++ C + P RP ++V+DL
Sbjct: 263 IP----VEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 101/208 (48%), Gaps = 26/208 (12%)
Query: 517 IGAGMLGSV----YRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL 572
IG G G V YR G +AVK + A++Q FL + + ++RH+N+V+L
Sbjct: 201 IGKGEFGDVMLGDYR-----GNKVAVKCIKNDATAQA----FLAEASVMTQLRHSNLVQL 251
Query: 573 KGYCAEH-GQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEIC 631
G E G ++ EY + G+L D L S ++ L + ++ +L A+EYL
Sbjct: 252 LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRG--RSVLGGDCLLKFSLDVCEAMEYLE--- 306
Query: 632 QPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FESG 690
VHR+ + N+ VSD GL SS +Q +G L + APE
Sbjct: 307 GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS---TQDTGKLPVK--WTAPEALREK 361
Query: 691 IYTCQSDVYSFGVVMLELLT-GRKSYDR 717
++ +SDV+SFG+++ E+ + GR Y R
Sbjct: 362 KFSTKSDVWSFGILLWEIYSFGRVPYPR 389
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 101/208 (48%), Gaps = 26/208 (12%)
Query: 517 IGAGMLGSV----YRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL 572
IG G G V YR G +AVK + A++Q FL + + ++RH+N+V+L
Sbjct: 29 IGKGEFGDVMLGDYR-----GNKVAVKCIKNDATAQA----FLAEASVMTQLRHSNLVQL 79
Query: 573 KGYCAEH-GQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEIC 631
G E G ++ EY + G+L D L S ++ L + ++ +L A+EYL
Sbjct: 80 LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRG--RSVLGGDCLLKFSLDVCEAMEYLE--- 134
Query: 632 QPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FESG 690
VHR+ + N+ VSD GL SS +Q +G L + APE
Sbjct: 135 GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS---TQDTGKLPVK--WTAPEALREK 189
Query: 691 IYTCQSDVYSFGVVMLELLT-GRKSYDR 717
++ +SDV+SFG+++ E+ + GR Y R
Sbjct: 190 KFSTKSDVWSFGILLWEIYSFGRVPYPR 217
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 133/342 (38%), Gaps = 57/342 (16%)
Query: 479 EGTAVKTSTKTAKPFTTARSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQL-----PDG 533
EG + T P+ F +LQ F + +GAG G V A D
Sbjct: 23 EGNSYTFIDPTQLPYNEKWEFPRNNLQ-----FGKT--LGAGAFGKVVEATAFGLGKEDA 75
Query: 534 KL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNG 592
L +AVK L A + +K+ EL +H NIV L G C G L+I EYC G
Sbjct: 76 VLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYG 135
Query: 593 TLQDML---------------HSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVH 637
L + L H+ +E LS + + A+ + +L +H
Sbjct: 136 DLLNFLRRKRPPGLEYSYNPSHNPEE---QLSSRDLLHFSSQVAQGMAFL---ASKNCIH 189
Query: 638 RNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE--FESGIYTCQ 695
R+ + N+ + D GLA I + S + G+ + APE F+ +YT Q
Sbjct: 190 RDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDC-VYTVQ 248
Query: 696 SDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSLSGQYPA 754
SDV+S+G+++ E+ + G Y P + ++V PA
Sbjct: 249 SDVWSYGILLWEIFSLGLNPY----------------PGILVNSKFYKLVKDGYQMAQPA 292
Query: 755 KSLSHFADIISRCVQSEPEFRPPMSEV---VQDLVDMIRRER 793
+ + I+ C EP RP ++ +Q+ RRER
Sbjct: 293 FAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQEDRRER 334
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 124/291 (42%), Gaps = 35/291 (12%)
Query: 509 NSFSQENLIGAGMLGSVY--RAQLPDGKLL--AVKKLDKRASSQQKDDEFLELVNNIDRI 564
+ S + ++GAG G V R +LP K + A+K L + +Q+ D FL + + +
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD-FLGEASIMGQF 103
Query: 565 RHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARAL 624
H NI+ L+G + +++ EY NG+L L D + + M G A +
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA---QFTVIQLVGMLRGIASGM 160
Query: 625 EYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS---SGSVSQLSGHLLTAYG 681
+YL ++ VHR+ + NI VSD GL+ ++ + + G +
Sbjct: 161 KYLSDMG---FVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIR 215
Query: 682 YGAPE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDA 739
+ +PE +T SDV+S+G+V+ E+++ G + Y W + I A
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------WEMSNQDVIKA 262
Query: 740 LSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIR 790
VD P + ++ C Q + RP ++V L +IR
Sbjct: 263 ----VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 94/210 (44%), Gaps = 31/210 (14%)
Query: 517 IGAGMLGSVYRAQ---LPD--GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+G G GSV + L D G+++AVKKL +D F + + ++H NIV+
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVK 76
Query: 572 LKGYCAEHGQR--LLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
KG C G+R LI EY G+L+D L E +++ + L+Y +
Sbjct: 77 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-------------KLLQYTSQ 123
Query: 630 ICQ-------PPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI-SSGSVSQLSGHLLTAYG 681
IC+ +HRN + NI V + D GL ++ ++ +
Sbjct: 124 ICKGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIF 183
Query: 682 YGAPE-FESGIYTCQSDVYSFGVVMLELLT 710
+ APE ++ SDV+SFGVV+ EL T
Sbjct: 184 WYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 124/291 (42%), Gaps = 35/291 (12%)
Query: 509 NSFSQENLIGAGMLGSVY--RAQLPDGKLL--AVKKLDKRASSQQKDDEFLELVNNIDRI 564
+ S + ++GAG G V R +LP K + A+K L + +Q+ D FL + + +
Sbjct: 33 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD-FLGEASIMGQF 91
Query: 565 RHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARAL 624
H NI+ L+G + +++ EY NG+L L D + + M G A +
Sbjct: 92 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA---QFTVIQLVGMLRGIASGM 148
Query: 625 EYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS---SGSVSQLSGHLLTAYG 681
+YL ++ VHR+ + NI VSD GL+ ++ + + G +
Sbjct: 149 KYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIR 203
Query: 682 YGAPE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDA 739
+ +PE +T SDV+S+G+V+ E+++ G + Y W + I A
Sbjct: 204 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------WEMSNQDVIKA 250
Query: 740 LSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIR 790
VD P + ++ C Q + RP ++V L +IR
Sbjct: 251 ----VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 297
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 124/291 (42%), Gaps = 35/291 (12%)
Query: 509 NSFSQENLIGAGMLGSVY--RAQLPDGKLL--AVKKLDKRASSQQKDDEFLELVNNIDRI 564
+ S + ++GAG G V R +LP K + A+K L + +Q+ D FL + + +
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD-FLGEASIMGQF 103
Query: 565 RHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARAL 624
H NI+ L+G + +++ EY NG+L L D + + M G A +
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA---QFTVIQLVGMLRGIASGM 160
Query: 625 EYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS---SGSVSQLSGHLLTAYG 681
+YL ++ VHR+ + NI VSD GL+ ++ + + G +
Sbjct: 161 KYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIR 215
Query: 682 YGAPE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDA 739
+ +PE +T SDV+S+G+V+ E+++ G + Y W + I A
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------WEMSNQDVIKA 262
Query: 740 LSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIR 790
VD P + ++ C Q + RP ++V L +IR
Sbjct: 263 ----VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 123/291 (42%), Gaps = 35/291 (12%)
Query: 509 NSFSQENLIGAGMLGSVY--RAQLPDGKLL--AVKKLDKRASSQQKDDEFLELVNNIDRI 564
+ S + ++GAG G V R +LP K + A+K L + +Q+ D FL + + +
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD-FLGEASIMGQF 103
Query: 565 RHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARAL 624
H NI+ L+G + +++ EY NG+L L D + + M G A +
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA---QFTVIQLVGMLRGIASGM 160
Query: 625 EYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS---SGSVSQLSGHLLTAYG 681
+YL ++ VHR+ + NI VSD GL ++ + + G +
Sbjct: 161 KYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKI--PIR 215
Query: 682 YGAPE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDA 739
+ +PE +T SDV+S+G+V+ E+++ G + Y W + I A
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------WEMSNQDVIKA 262
Query: 740 LSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIR 790
VD P + ++ C Q + RP ++V L +IR
Sbjct: 263 ----VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 128/283 (45%), Gaps = 46/283 (16%)
Query: 511 FSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRAS-SQQKDDEFLELVNNIDRIRHAN 568
FS IG G G+VY A+ + + +++A+KK+ S +K + ++ V + ++RH N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 569 IVELKG-YCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
++ +G Y EH L+ EYC G+ D+L K L + GA + L YL
Sbjct: 116 TIQYRGCYLREHTA-WLVMEYCL-GSASDLLEVH---KKPLQEVEIAAVTHGALQGLAYL 170
Query: 628 HEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE- 686
H ++HR+ K+ NI V + D G A +++ + + T Y + APE
Sbjct: 171 H---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX-----FVGTPY-WMAPEV 221
Query: 687 ---FESGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRM 743
+ G Y + DV+S G+ +EL + P L +++A+S +
Sbjct: 222 ILAMDEGQYDGKVDVWSLGITCIELAERK-------------------PPLFNMNAMSAL 262
Query: 744 VDPSLSGQYPAKSLSH----FADIISRCVQSEPEFRPPMSEVV 782
+ + PA H F + + C+Q P+ R P SEV+
Sbjct: 263 YHIA-QNESPALQSGHWSEYFRNFVDSCLQKIPQDR-PTSEVL 303
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 115/278 (41%), Gaps = 29/278 (10%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
+G G G V + +A+K + + + S+ DEF+E + + H +V+L G C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE---DEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ +I EY +NG L + L E+++ + M A+EYL +
Sbjct: 89 TKQRPIFIITEYMANGCLLNYLR---EMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFL 142
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FESGIYTCQ 695
HR+ + N V VSD GL+ + + G + PE ++ +
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPV-RWSPPEVLMYSKFSSK 201
Query: 696 SDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSLSGQYPA 754
SD+++FGV+M E+ + G+ Y+R N I R+ P L+ +
Sbjct: 202 SDIWAFGVLMWEIYSLGKMPYERFTNS----------ETAEHIAQGLRLYRPHLASE--- 248
Query: 755 KSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIRRE 792
I+ C + + RP ++ +++D++ E
Sbjct: 249 ----KVYTIMYSCWHEKADERPTFKILLSNILDVMDEE 282
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 124/291 (42%), Gaps = 35/291 (12%)
Query: 509 NSFSQENLIGAGMLGSVY--RAQLPDGKLL--AVKKLDKRASSQQKDDEFLELVNNIDRI 564
+ S + ++GAG G V R +LP K + A+K L + +Q+ D FL + + +
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD-FLGEASIMGQF 103
Query: 565 RHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARAL 624
H NI+ L+G + +++ EY NG+L L D + + M G A +
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA---QFTVIQLVGMLRGIASGM 160
Query: 625 EYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS---SGSVSQLSGHLLTAYG 681
+YL ++ VHR+ + NI VSD GL+ ++ + + G +
Sbjct: 161 KYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIR 215
Query: 682 YGAPE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDA 739
+ +PE +T SDV+S+G+V+ E+++ G + Y W + I A
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------WEMSNQDVIKA 262
Query: 740 LSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIR 790
VD P + ++ C Q + RP ++V L +IR
Sbjct: 263 ----VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 124/291 (42%), Gaps = 35/291 (12%)
Query: 509 NSFSQENLIGAGMLGSVY--RAQLPDGKLL--AVKKLDKRASSQQKDDEFLELVNNIDRI 564
+ S + ++GAG G V R +LP K + A+K L + +Q+ D FL + + +
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD-FLGEASIMGQF 103
Query: 565 RHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARAL 624
H NI+ L+G + +++ EY NG+L L D + + M G A +
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA---QFTVIQLVGMLRGIASGM 160
Query: 625 EYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS---SGSVSQLSGHLLTAYG 681
+YL ++ VHR+ + NI VSD GL+ ++ + + G +
Sbjct: 161 KYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIR 215
Query: 682 YGAPE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDA 739
+ +PE +T SDV+S+G+V+ E+++ G + Y W + I A
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------WEMSNQDVIKA 262
Query: 740 LSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIR 790
VD P + ++ C Q + RP ++V L +IR
Sbjct: 263 ----VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 124/291 (42%), Gaps = 35/291 (12%)
Query: 509 NSFSQENLIGAGMLGSVY--RAQLPDGKLL--AVKKLDKRASSQQKDDEFLELVNNIDRI 564
+ S + ++GAG G V R +LP K + A+K L + +Q+ D FL + + +
Sbjct: 16 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD-FLGEASIMGQF 74
Query: 565 RHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARAL 624
H NI+ L+G + +++ EY NG+L L D + + M G A +
Sbjct: 75 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA---QFTVIQLVGMLRGIASGM 131
Query: 625 EYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS---SGSVSQLSGHLLTAYG 681
+YL ++ VHR+ + NI VSD GL+ ++ + + G +
Sbjct: 132 KYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIR 186
Query: 682 YGAPE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDA 739
+ +PE +T SDV+S+G+V+ E+++ G + Y W + I A
Sbjct: 187 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------WEMSNQDVIKA 233
Query: 740 LSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIR 790
VD P + ++ C Q + RP ++V L +IR
Sbjct: 234 ----VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 280
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 92/206 (44%), Gaps = 12/206 (5%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
+G G G V + +A+K + + + S+ DEF+E + + H +V+L G C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE---DEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ +I EY +NG L + L E+++ + M A+EYL +
Sbjct: 74 TKQRPIFIITEYMANGCLLNYLR---EMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFL 127
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FESGIYTCQ 695
HR+ + N V VSD GL+ + + G + PE ++ +
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPV-RWSPPEVLMYSKFSSK 186
Query: 696 SDVYSFGVVMLELLT-GRKSYDRTRN 720
SD+++FGV+M E+ + G+ Y+R N
Sbjct: 187 SDIWAFGVLMWEIYSLGKMPYERFTN 212
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 119/303 (39%), Gaps = 42/303 (13%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKL---LAVKKLDKRASSQQKDDEFLELVNNIDRIR 565
N +++IG G G V +A++ L A+K++ + AS D EL
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 81
Query: 566 HANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNN------------LSWNTR 613
H NI+ L G C G L EY +G L D L L+ + LS
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 614 IRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGS---VS 670
+ A AR ++YL Q +HRN + NI ++D GL S G V
Sbjct: 142 LHFAADVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGL----SRGQEVYVK 194
Query: 671 QLSGHLLTAYGYGAPEFESGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWA 730
+ G L + +YT SDV+S+GV++ E+++ + E +
Sbjct: 195 KTMGRLPVRW-MAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYE---K 250
Query: 731 IPQLHDIDALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIR 790
+PQ + ++ P D++ +C + +P RP ++++ L M+
Sbjct: 251 LPQGYRLEK-------------PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 297
Query: 791 RER 793
+
Sbjct: 298 ERK 300
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 124/291 (42%), Gaps = 35/291 (12%)
Query: 509 NSFSQENLIGAGMLGSVY--RAQLPDGKLL--AVKKLDKRASSQQKDDEFLELVNNIDRI 564
+ S + ++GAG G V R +LP K + A+K L + +Q+ D FL + + +
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD-FLGEASIMGQF 103
Query: 565 RHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARAL 624
H NI+ L+G + +++ EY NG+L L D + + M G A +
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA---QFTVIQLVGMLRGIASGM 160
Query: 625 EYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS---SGSVSQLSGHLLTAYG 681
+YL ++ VHR+ + NI VSD GL+ ++ + + G +
Sbjct: 161 KYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIR 215
Query: 682 YGAPE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDA 739
+ +PE +T SDV+S+G+V+ E+++ G + Y W + I A
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------WEMSNQDVIKA 262
Query: 740 LSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIR 790
VD P + ++ C Q + RP ++V L +IR
Sbjct: 263 ----VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 124/291 (42%), Gaps = 35/291 (12%)
Query: 509 NSFSQENLIGAGMLGSVY--RAQLPDGKLL--AVKKLDKRASSQQKDDEFLELVNNIDRI 564
+ S + ++GAG G V R +LP K + A+K L + +Q+ D FL + + +
Sbjct: 43 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD-FLGEASIMGQF 101
Query: 565 RHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARAL 624
H NI+ L+G + +++ EY NG+L L D + + M G A +
Sbjct: 102 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA---QFTVIQLVGMLRGIASGM 158
Query: 625 EYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS---SGSVSQLSGHLLTAYG 681
+YL ++ VHR+ + NI VSD GL+ ++ + + G +
Sbjct: 159 KYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIR 213
Query: 682 YGAPE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDA 739
+ +PE +T SDV+S+G+V+ E+++ G + Y W + I A
Sbjct: 214 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------WEMSNQDVIKA 260
Query: 740 LSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIR 790
VD P + ++ C Q + RP ++V L +IR
Sbjct: 261 ----VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 307
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 125/283 (44%), Gaps = 46/283 (16%)
Query: 511 FSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRAS-SQQKDDEFLELVNNIDRIRHAN 568
FS IG G G+VY A+ + + +++A+KK+ S +K + ++ V + ++RH N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 569 IVELKG-YCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
++ +G Y EH L+ EYC G+ D+L K L + GA + L YL
Sbjct: 77 TIQYRGCYLREHTA-WLVMEYCL-GSASDLLEVH---KKPLQEVEIAAVTHGALQGLAYL 131
Query: 628 HEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE- 686
H ++HR+ K+ NI V + D G S S+ + + + APE
Sbjct: 132 H---SHNMIHRDVKAGNILLSEPGLVKLGDFG------SASIMAPANXFVGTPYWMAPEV 182
Query: 687 ---FESGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRM 743
+ G Y + DV+S G+ +EL + P L +++A+S +
Sbjct: 183 ILAMDEGQYDGKVDVWSLGITCIELAERK-------------------PPLFNMNAMSAL 223
Query: 744 VDPSLSGQYPAKSLSH----FADIISRCVQSEPEFRPPMSEVV 782
+ + PA H F + + C+Q P+ R P SEV+
Sbjct: 224 YHIA-QNESPALQSGHWSEYFRNFVDSCLQKIPQDR-PTSEVL 264
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 92/206 (44%), Gaps = 12/206 (5%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
+G G G V + +A+K + + + S+ DEF+E + + H +V+L G C
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE---DEFIEEAKVMMNLSHEKLVQLYGVC 72
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ +I EY +NG L + L E+++ + M A+EYL +
Sbjct: 73 TKQRPIFIITEYMANGCLLNYLR---EMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFL 126
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FESGIYTCQ 695
HR+ + N V VSD GL+ + + G + PE ++ +
Sbjct: 127 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPV-RWSPPEVLMYSKFSSK 185
Query: 696 SDVYSFGVVMLELLT-GRKSYDRTRN 720
SD+++FGV+M E+ + G+ Y+R N
Sbjct: 186 SDIWAFGVLMWEIYSLGKMPYERFTN 211
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 117/272 (43%), Gaps = 27/272 (9%)
Query: 517 IGAGMLGSVYRAQL------PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G VY+ L + +A+K L +A ++ EF R++H N+V
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLRE-EFRHEAMLRARLQHPNVV 92
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDML-----HS-------DDELKNNLSWNTRIRMAL 618
L G + +I+ YCS+G L + L HS D +K+ L + +
Sbjct: 93 CLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVA 152
Query: 619 GAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLT 678
A +EYL +VH++ + N+ V +SD GL + + +L G+ L
Sbjct: 153 QIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLL 209
Query: 679 AYGYGAPE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRG--EQFLVRWAIPQL 734
+ APE G ++ SD++S+GVV+ E+ + G + Y N+ E R +P
Sbjct: 210 PIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPCP 269
Query: 735 HDIDALSRMVDPSLSGQYPAKSLSHFADIISR 766
D A + ++P++ F DI SR
Sbjct: 270 DDCPAWVYALMIECWNEFPSRR-PRFKDIHSR 300
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 92/206 (44%), Gaps = 12/206 (5%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
+G G G V + +A+K + + + S+ DEF+E + + H +V+L G C
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE---DEFIEEAKVMMNLSHEKLVQLYGVC 68
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ +I EY +NG L + L E+++ + M A+EYL +
Sbjct: 69 TKQRPIFIITEYMANGCLLNYLR---EMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFL 122
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FESGIYTCQ 695
HR+ + N V VSD GL+ + + G + PE ++ +
Sbjct: 123 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPV-RWSPPEVLMYSKFSSK 181
Query: 696 SDVYSFGVVMLELLT-GRKSYDRTRN 720
SD+++FGV+M E+ + G+ Y+R N
Sbjct: 182 SDIWAFGVLMWEIYSLGKMPYERFTN 207
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 92/206 (44%), Gaps = 12/206 (5%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
+G G G V + +A+K + + + S+ DEF+E + + H +V+L G C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE---DEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ +I EY +NG L + L E+++ + M A+EYL +
Sbjct: 74 TKQRPIFIITEYMANGCLLNYLR---EMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFL 127
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FESGIYTCQ 695
HR+ + N V VSD GL+ + + G + PE ++ +
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPV-RWSPPEVLMYSKFSSK 186
Query: 696 SDVYSFGVVMLELLT-GRKSYDRTRN 720
SD+++FGV+M E+ + G+ Y+R N
Sbjct: 187 SDIWAFGVLMWEIYSLGKMPYERFTN 212
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 100/225 (44%), Gaps = 27/225 (12%)
Query: 517 IGAGMLGSVYRAQL------PDGKLLAVKKLDKRASSQQKD-DEFLELVNNIDRIRHANI 569
+G G G V+ A+ D L+AVK L + +KD EL+ N+ +H +I
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNL---QHEHI 79
Query: 570 VELKGYCAEHGQRLLIYEYCSNGTLQDML--HSDDEL----------KNNLSWNTRIRMA 617
V+ G C + ++++EY +G L L H D + K L + + +A
Sbjct: 80 VKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIA 139
Query: 618 LGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLL 677
A + YL VHR+ + N V + D G++ + S ++ GH +
Sbjct: 140 SQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTM 196
Query: 678 TAYGYGAPE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRN 720
+ PE +T +SDV+SFGV++ E+ T G++ + + N
Sbjct: 197 LPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSN 241
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 115/278 (41%), Gaps = 29/278 (10%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
+G G G V + +A+K + + + S+ DEF+E + + H +V+L G C
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE---DEFIEEAKVMMNLSHEKLVQLYGVC 79
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ +I EY +NG L + L E+++ + M A+EYL +
Sbjct: 80 TKQRPIFIITEYMANGCLLNYLR---EMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFL 133
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FESGIYTCQ 695
HR+ + N V VSD GL+ + + G + PE ++ +
Sbjct: 134 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPV-RWSPPEVLMYSKFSSK 192
Query: 696 SDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSLSGQYPA 754
SD+++FGV+M E+ + G+ Y+R N I R+ P L+ +
Sbjct: 193 SDIWAFGVLMWEIYSLGKMPYERFTNS----------ETAEHIAQGLRLYRPHLASE--- 239
Query: 755 KSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIRRE 792
I+ C + + RP ++ +++D++ E
Sbjct: 240 ----KVYTIMYSCWHEKADERPTFKILLSNILDVMDEE 273
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 117/272 (43%), Gaps = 27/272 (9%)
Query: 517 IGAGMLGSVYRAQL------PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G VY+ L + +A+K L +A ++ EF R++H N+V
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLRE-EFRHEAMLRARLQHPNVV 75
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDML-----HS-------DDELKNNLSWNTRIRMAL 618
L G + +I+ YCS+G L + L HS D +K+ L + +
Sbjct: 76 CLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVA 135
Query: 619 GAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLT 678
A +EYL +VH++ + N+ V +SD GL + + +L G+ L
Sbjct: 136 QIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLL 192
Query: 679 AYGYGAPE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRG--EQFLVRWAIPQL 734
+ APE G ++ SD++S+GVV+ E+ + G + Y N+ E R +P
Sbjct: 193 PIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPCP 252
Query: 735 HDIDALSRMVDPSLSGQYPAKSLSHFADIISR 766
D A + ++P++ F DI SR
Sbjct: 253 DDCPAWVYALMIECWNEFPSRR-PRFKDIHSR 283
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 115/278 (41%), Gaps = 29/278 (10%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
+G G G V + +A+K + + + S+ DEF+E + + H +V+L G C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE---DEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ +I EY +NG L + L E+++ + M A+EYL +
Sbjct: 89 TKQRPIFIITEYMANGCLLNYLR---EMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFL 142
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FESGIYTCQ 695
HR+ + N V VSD GL+ + + G + PE ++ +
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPV-RWSPPEVLMYSKFSSK 201
Query: 696 SDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSLSGQYPA 754
SD+++FGV+M E+ + G+ Y+R N I R+ P L+ +
Sbjct: 202 SDIWAFGVLMWEIYSLGKMPYERFTNS----------ETAEHIAQGLRLYRPHLASE--- 248
Query: 755 KSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIRRE 792
I+ C + + RP ++ +++D++ E
Sbjct: 249 ----KVYTIMYSCWHEKADERPTFKILLSNILDVMDEE 282
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 94/210 (44%), Gaps = 31/210 (14%)
Query: 517 IGAGMLGSVYRAQ---LPD--GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+G G GSV + L D G+++AVKKL +D F + + ++H NIV+
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVK 75
Query: 572 LKGYCAEHGQR--LLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
KG C G+R LI EY G+L+D L E +++ + L+Y +
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-------------KLLQYTSQ 122
Query: 630 ICQ-------PPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI-SSGSVSQLSGHLLTAYG 681
IC+ +HR+ + NI V + D GL ++ ++ +
Sbjct: 123 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 182
Query: 682 YGAPE-FESGIYTCQSDVYSFGVVMLELLT 710
+ APE ++ SDV+SFGVV+ EL T
Sbjct: 183 WYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 94/210 (44%), Gaps = 31/210 (14%)
Query: 517 IGAGMLGSVYRAQ---LPD--GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+G G GSV + L D G+++AVKKL +D F + + ++H NIV+
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVK 79
Query: 572 LKGYCAEHGQR--LLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
KG C G+R LI EY G+L+D L E +++ + L+Y +
Sbjct: 80 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-------------KLLQYTSQ 126
Query: 630 ICQ-------PPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI-SSGSVSQLSGHLLTAYG 681
IC+ +HR+ + NI V + D GL ++ ++ +
Sbjct: 127 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 186
Query: 682 YGAPE-FESGIYTCQSDVYSFGVVMLELLT 710
+ APE ++ SDV+SFGVV+ EL T
Sbjct: 187 WYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 94/210 (44%), Gaps = 31/210 (14%)
Query: 517 IGAGMLGSVYRAQ---LPD--GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+G G GSV + L D G+++AVKKL +D F + + ++H NIV+
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVK 106
Query: 572 LKGYCAEHGQR--LLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
KG C G+R LI EY G+L+D L E +++ + L+Y +
Sbjct: 107 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-------------KLLQYTSQ 153
Query: 630 ICQ-------PPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI-SSGSVSQLSGHLLTAYG 681
IC+ +HR+ + NI V + D GL ++ ++ +
Sbjct: 154 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 213
Query: 682 YGAPE-FESGIYTCQSDVYSFGVVMLELLT 710
+ APE ++ SDV+SFGVV+ EL T
Sbjct: 214 WYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 94/210 (44%), Gaps = 31/210 (14%)
Query: 517 IGAGMLGSVYRAQ---LPD--GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+G G GSV + L D G+++AVKKL +D F + + ++H NIV+
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVK 74
Query: 572 LKGYCAEHGQR--LLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
KG C G+R LI EY G+L+D L E +++ + L+Y +
Sbjct: 75 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-------------KLLQYTSQ 121
Query: 630 ICQ-------PPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI-SSGSVSQLSGHLLTAYG 681
IC+ +HR+ + NI V + D GL ++ ++ +
Sbjct: 122 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 181
Query: 682 YGAPE-FESGIYTCQSDVYSFGVVMLELLT 710
+ APE ++ SDV+SFGVV+ EL T
Sbjct: 182 WYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 94/210 (44%), Gaps = 31/210 (14%)
Query: 517 IGAGMLGSVYRAQ---LPD--GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+G G GSV + L D G+++AVKKL +D F + + ++H NIV+
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVK 78
Query: 572 LKGYCAEHGQR--LLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
KG C G+R LI EY G+L+D L E +++ + L+Y +
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-------------KLLQYTSQ 125
Query: 630 ICQ-------PPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI-SSGSVSQLSGHLLTAYG 681
IC+ +HR+ + NI V + D GL ++ ++ +
Sbjct: 126 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 185
Query: 682 YGAPE-FESGIYTCQSDVYSFGVVMLELLT 710
+ APE ++ SDV+SFGVV+ EL T
Sbjct: 186 WYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 94/210 (44%), Gaps = 31/210 (14%)
Query: 517 IGAGMLGSVYRAQ---LPD--GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+G G GSV + L D G+++AVKKL +D F + + ++H NIV+
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVK 82
Query: 572 LKGYCAEHGQR--LLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
KG C G+R LI EY G+L+D L E +++ + L+Y +
Sbjct: 83 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-------------KLLQYTSQ 129
Query: 630 ICQ-------PPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI-SSGSVSQLSGHLLTAYG 681
IC+ +HR+ + NI V + D GL ++ ++ +
Sbjct: 130 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 189
Query: 682 YGAPE-FESGIYTCQSDVYSFGVVMLELLT 710
+ APE ++ SDV+SFGVV+ EL T
Sbjct: 190 WYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 94/210 (44%), Gaps = 31/210 (14%)
Query: 517 IGAGMLGSVYRAQ---LPD--GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+G G GSV + L D G+++AVKKL +D F + + ++H NIV+
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVK 80
Query: 572 LKGYCAEHGQR--LLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
KG C G+R LI EY G+L+D L E +++ + L+Y +
Sbjct: 81 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-------------KLLQYTSQ 127
Query: 630 ICQ-------PPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI-SSGSVSQLSGHLLTAYG 681
IC+ +HR+ + NI V + D GL ++ ++ +
Sbjct: 128 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 187
Query: 682 YGAPE-FESGIYTCQSDVYSFGVVMLELLT 710
+ APE ++ SDV+SFGVV+ EL T
Sbjct: 188 WYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 94/210 (44%), Gaps = 31/210 (14%)
Query: 517 IGAGMLGSVYRAQ---LPD--GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+G G GSV + L D G+++AVKKL +D F + + ++H NIV+
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVK 75
Query: 572 LKGYCAEHGQR--LLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
KG C G+R LI EY G+L+D L E +++ + L+Y +
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-------------KLLQYTSQ 122
Query: 630 ICQ-------PPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI-SSGSVSQLSGHLLTAYG 681
IC+ +HR+ + NI V + D GL ++ ++ +
Sbjct: 123 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 182
Query: 682 YGAPE-FESGIYTCQSDVYSFGVVMLELLT 710
+ APE ++ SDV+SFGVV+ EL T
Sbjct: 183 WYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 94/210 (44%), Gaps = 31/210 (14%)
Query: 517 IGAGMLGSVYRAQ---LPD--GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+G G GSV + L D G+++AVKKL +D F + + ++H NIV+
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVK 81
Query: 572 LKGYCAEHGQR--LLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
KG C G+R LI EY G+L+D L E +++ + L+Y +
Sbjct: 82 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-------------KLLQYTSQ 128
Query: 630 ICQ-------PPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI-SSGSVSQLSGHLLTAYG 681
IC+ +HR+ + NI V + D GL ++ ++ +
Sbjct: 129 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 188
Query: 682 YGAPE-FESGIYTCQSDVYSFGVVMLELLT 710
+ APE ++ SDV+SFGVV+ EL T
Sbjct: 189 WYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 94/210 (44%), Gaps = 31/210 (14%)
Query: 517 IGAGMLGSVYRAQ---LPD--GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+G G GSV + L D G+++AVKKL +D F + + ++H NIV+
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVK 73
Query: 572 LKGYCAEHGQR--LLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
KG C G+R LI EY G+L+D L E +++ + L+Y +
Sbjct: 74 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-------------KLLQYTSQ 120
Query: 630 ICQ-------PPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI-SSGSVSQLSGHLLTAYG 681
IC+ +HR+ + NI V + D GL ++ ++ +
Sbjct: 121 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 180
Query: 682 YGAPE-FESGIYTCQSDVYSFGVVMLELLT 710
+ APE ++ SDV+SFGVV+ EL T
Sbjct: 181 WYAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 95/210 (45%), Gaps = 31/210 (14%)
Query: 517 IGAGMLGSVYRAQ---LPD--GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+G G GSV + L D G+++AVKKL +D F + + ++H NIV+
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVK 78
Query: 572 LKGYCAEHGQR--LLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
KG C G+R LI EY G+L+D L + E +++ + L+Y +
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHI-------------KLLQYTSQ 125
Query: 630 ICQ-------PPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI-SSGSVSQLSGHLLTAYG 681
IC+ +HR+ + NI V + D GL ++ ++ +
Sbjct: 126 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 185
Query: 682 YGAPE-FESGIYTCQSDVYSFGVVMLELLT 710
+ APE ++ SDV+SFGVV+ EL T
Sbjct: 186 WYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 94/210 (44%), Gaps = 31/210 (14%)
Query: 517 IGAGMLGSVYRAQ---LPD--GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+G G GSV + L D G+++AVKKL +D F + + ++H NIV+
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVK 75
Query: 572 LKGYCAEHGQR--LLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
KG C G+R LI EY G+L+D L E +++ + L+Y +
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-------------KLLQYTSQ 122
Query: 630 ICQ-------PPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI-SSGSVSQLSGHLLTAYG 681
IC+ +HR+ + NI V + D GL ++ ++ +
Sbjct: 123 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIF 182
Query: 682 YGAPE-FESGIYTCQSDVYSFGVVMLELLT 710
+ APE ++ SDV+SFGVV+ EL T
Sbjct: 183 WYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 106/240 (44%), Gaps = 27/240 (11%)
Query: 494 TTARSFTIASLQQYTNSFSQE---------NLIGAGMLGSVY--RAQLPDGK--LLAVKK 540
T FT Q F++E +IG G G V R ++P + +A+K
Sbjct: 5 TFVDPFTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKT 64
Query: 541 LDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHS 600
L + +Q+ D FL + + + H NI+ L+G + ++I EY NG+L L
Sbjct: 65 LKAGYTDKQRRD-FLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRK 123
Query: 601 DDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGL 660
+D + + M G ++YL ++ VHR+ + NI VSD G+
Sbjct: 124 ND---GRFTVIQLVGMLRGIGSGMKYLSDMSA---VHRDLAARNILVNSNLVCKVSDFGM 177
Query: 661 APLIS---SGSVSQLSGHLLTAYGYGAPE-FESGIYTCQSDVYSFGVVMLELLT-GRKSY 715
+ ++ + + G + + APE +T SDV+S+G+VM E+++ G + Y
Sbjct: 178 SRVLEDDPEAAYTTRGGKI--PIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPY 235
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 119/282 (42%), Gaps = 29/282 (10%)
Query: 512 SQENLIGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+ ++ +G G G VY L +AVK L + + +EFL+ + I+H N+V
Sbjct: 35 TMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLV 91
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
+L G C ++ EY G L D L + + ++ + MA + A+EYL
Sbjct: 92 QLLGVCTLEPPFYIVTEYMPYGNLLDYLRECN--REEVTAVVLLYMATQISSAMEYLE-- 147
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FES 689
+ +HR+ + N V V+D GL+ L++ + + +G + APE
Sbjct: 148 -KKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAY 205
Query: 690 GIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSL 748
++ +SDV++FGV++ E+ T G Y P + D+ + +++
Sbjct: 206 NTFSIKSDVWAFGVLLWEIATYGMSPY----------------PGI-DLSQVYDLLEKGY 248
Query: 749 SGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIR 790
+ P +++ C + P RP +E Q M
Sbjct: 249 RMEQPEGCPPKVYELMRACWKWSPADRPSFAETHQAFETMFH 290
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 101/225 (44%), Gaps = 28/225 (12%)
Query: 517 IGAGMLGSVYRAQ----LP--DGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G V+ A+ LP D L+AVK L + + S ++D F + ++H +IV
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQD--FQREAELLTMLQHQHIV 83
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHS-----------DDELKNNLSWNTRIRMALG 619
G C E L+++EY +G L L S +D L + +A
Sbjct: 84 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 143
Query: 620 AARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTA 679
A + YL + VHR+ + N V + D G++ I S ++ G +
Sbjct: 144 VAAGMVYLAGL---HFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLP 200
Query: 680 YGYGAPEFESGIY---TCQSDVYSFGVVMLELLT-GRKSYDRTRN 720
+ P ES +Y T +SDV+SFGVV+ E+ T G++ + + N
Sbjct: 201 IRWMPP--ESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN 243
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 128/343 (37%), Gaps = 55/343 (16%)
Query: 479 EGTAVKTSTKTAKPFTTARSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQL-----PDG 533
EG + T P+ F +LQ F + +GAG G V A D
Sbjct: 8 EGNSYTFIDPTQLPYNEKWEFPRNNLQ-----FGKT--LGAGAFGKVVEATAFGLGKEDA 60
Query: 534 KL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNG 592
L +AVK L A + +K+ EL +H NIV L G C G L+I EYC G
Sbjct: 61 VLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYG 120
Query: 593 TLQDMLHS-------------------DDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
L + L D E L + + A+ + +L
Sbjct: 121 DLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASK 177
Query: 634 PIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE--FESGI 691
+HR+ + N+ + D GLA I + S + G+ + APE F+ +
Sbjct: 178 NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDC-V 236
Query: 692 YTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSLSG 750
YT QSDV+S+G+++ E+ + G Y P + ++V
Sbjct: 237 YTVQSDVWSYGILLWEIFSLGLNPY----------------PGILVNSKFYKLVKDGYQM 280
Query: 751 QYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIRRER 793
PA + + I+ C EP RP ++ L + + +R
Sbjct: 281 AQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQEDR 323
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 101/229 (44%), Gaps = 33/229 (14%)
Query: 498 SFTIASLQQYTNSFSQENLIGAGMLGSVYRAQ---LPD--GKLLAVKKLDKRASSQQKDD 552
S + ++ F Q+ +G G GSV + L D G+++AVKKL +D
Sbjct: 19 SHNMTQFEERHLKFLQQ--LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD- 75
Query: 553 EFLELVNNIDRIRHANIVELKGYCAEHGQR--LLIYEYCSNGTLQDMLHSDDELKNNLSW 610
F + + ++H NIV+ KG C G+R LI EY G+L+D L E +++
Sbjct: 76 -FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-- 132
Query: 611 NTRIRMALGAARALEYLHEICQ-------PPIVHRNFKSANIXXXXXXAVSVSDCGLAPL 663
+ L+Y +IC+ +HR+ + NI V + D GL +
Sbjct: 133 -----------KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV 181
Query: 664 I-SSGSVSQLSGHLLTAYGYGAPE-FESGIYTCQSDVYSFGVVMLELLT 710
+ ++ + + APE ++ SDV+SFGVV+ EL T
Sbjct: 182 LPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 101/229 (44%), Gaps = 33/229 (14%)
Query: 498 SFTIASLQQYTNSFSQENLIGAGMLGSVYRAQ---LPD--GKLLAVKKLDKRASSQQKDD 552
S + ++ F Q+ +G G GSV + L D G+++AVKKL +D
Sbjct: 19 SHNMTQFEERHLKFLQQ--LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD- 75
Query: 553 EFLELVNNIDRIRHANIVELKGYCAEHGQR--LLIYEYCSNGTLQDMLHSDDELKNNLSW 610
F + + ++H NIV+ KG C G+R LI EY G+L+D L E +++
Sbjct: 76 -FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-- 132
Query: 611 NTRIRMALGAARALEYLHEICQ-------PPIVHRNFKSANIXXXXXXAVSVSDCGLAPL 663
+ L+Y +IC+ +HR+ + NI V + D GL +
Sbjct: 133 -----------KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV 181
Query: 664 I-SSGSVSQLSGHLLTAYGYGAPE-FESGIYTCQSDVYSFGVVMLELLT 710
+ ++ + + APE ++ SDV+SFGVV+ EL T
Sbjct: 182 LPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 101/225 (44%), Gaps = 28/225 (12%)
Query: 517 IGAGMLGSVYRAQ----LP--DGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G V+ A+ LP D L+AVK L + + S ++D F + ++H +IV
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQD--FQREAELLTMLQHQHIV 106
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHS-----------DDELKNNLSWNTRIRMALG 619
G C E L+++EY +G L L S +D L + +A
Sbjct: 107 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 166
Query: 620 AARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTA 679
A + YL + VHR+ + N V + D G++ I S ++ G +
Sbjct: 167 VAAGMVYLAGL---HFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLP 223
Query: 680 YGYGAPEFESGIY---TCQSDVYSFGVVMLELLT-GRKSYDRTRN 720
+ P ES +Y T +SDV+SFGVV+ E+ T G++ + + N
Sbjct: 224 IRWMPP--ESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN 266
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 99/223 (44%), Gaps = 24/223 (10%)
Query: 517 IGAGMLGSVYRAQ----LP--DGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G V+ A+ LP D L+AVK L + + S ++D F + ++H +IV
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQD--FQREAELLTMLQHQHIV 77
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHS-----------DDELKNNLSWNTRIRMALG 619
G C E L+++EY +G L L S +D L + +A
Sbjct: 78 RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 137
Query: 620 AARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTA 679
A + YL + VHR+ + N V + D G++ I S ++ G +
Sbjct: 138 VAAGMVYLAGL---HFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLP 194
Query: 680 YGYGAPE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRN 720
+ PE +T +SDV+SFGVV+ E+ T G++ + + N
Sbjct: 195 IRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN 237
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 107/240 (44%), Gaps = 21/240 (8%)
Query: 491 KPFTTARSFTIASLQQYTNSFSQENLIGAGMLGSVY--RAQLPDGK--LLAVKKLDKRAS 546
+P RSFT + + E +IG+G G V R ++P + +A+K L +
Sbjct: 34 EPGRAGRSFT---REIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYT 90
Query: 547 SQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKN 606
+Q+ D FL + + + H NI+ L+G +++ EY NG+L L + D
Sbjct: 91 ERQRRD-FLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHD---G 146
Query: 607 NLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS- 665
+ + M G + YL ++ VHR+ + N+ VSD GL+ ++
Sbjct: 147 QFTIMQLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLED 203
Query: 666 --SGSVSQLSGHLLTAYGYGAPE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNR 721
+ + G + + APE ++ SDV+SFGVVM E+L G + Y NR
Sbjct: 204 DPDAAXTTTGGKI--PIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR 261
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 102/215 (47%), Gaps = 15/215 (6%)
Query: 509 NSFSQENLIGAGMLGSVYRA-QLPDGKLL----AVKKLDKRASSQQKDDEFLELVNNIDR 563
F + ++G+G G+VY+ +P+G+ + A+K+L + A+S + + E L+ +
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMAS 74
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+ + ++ L G C +L I + G L D + E K+N+ + + A+
Sbjct: 75 VDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVR---EHKDNIGSQYLLNWCVQIAKG 130
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS-QLSGHLLTAYGY 682
+ YL + +VHR+ + N+ V ++D GLA L+ + G +
Sbjct: 131 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 187
Query: 683 GAPEFESGIYTCQSDVYSFGVVMLELLT-GRKSYD 716
IYT QSDV+S+GV + EL+T G K YD
Sbjct: 188 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 102/215 (47%), Gaps = 15/215 (6%)
Query: 509 NSFSQENLIGAGMLGSVYRA-QLPDGKLL----AVKKLDKRASSQQKDDEFLELVNNIDR 563
F + ++G+G G+VY+ +P+G+ + A+K+L + A+S + + E L+ +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMAS 73
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+ + ++ L G C +L I + G L D + E K+N+ + + A+
Sbjct: 74 VDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVR---EHKDNIGSQYLLNWCVQIAKG 129
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS-QLSGHLLTAYGY 682
+ YL + +VHR+ + N+ V ++D GLA L+ + G +
Sbjct: 130 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 683 GAPEFESGIYTCQSDVYSFGVVMLELLT-GRKSYD 716
IYT QSDV+S+GV + EL+T G K YD
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 102/215 (47%), Gaps = 15/215 (6%)
Query: 509 NSFSQENLIGAGMLGSVYRA-QLPDGKLL----AVKKLDKRASSQQKDDEFLELVNNIDR 563
F + ++G+G G+VY+ +P+G+ + A+K+L + A+S + + E L+ +
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMAS 74
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+ + ++ L G C +L I + G L D + E K+N+ + + A+
Sbjct: 75 VDNPHVCRLLGICLTSTVQL-IMQLMPFGXLLDYVR---EHKDNIGSQYLLNWCVQIAKG 130
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS-QLSGHLLTAYGY 682
+ YL + +VHR+ + N+ V ++D GLA L+ + G +
Sbjct: 131 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 187
Query: 683 GAPEFESGIYTCQSDVYSFGVVMLELLT-GRKSYD 716
IYT QSDV+S+GV + EL+T G K YD
Sbjct: 188 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 102/215 (47%), Gaps = 15/215 (6%)
Query: 509 NSFSQENLIGAGMLGSVYRA-QLPDGKLL----AVKKLDKRASSQQKDDEFLELVNNIDR 563
F + ++G+G G+VY+ +P+G+ + A+K+L + A+S + + E L+ +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMAS 75
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+ + ++ L G C +L I + G L D + E K+N+ + + A+
Sbjct: 76 VDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVR---EHKDNIGSQYLLNWCVQIAKG 131
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS-QLSGHLLTAYGY 682
+ YL + +VHR+ + N+ V ++D GLA L+ + G +
Sbjct: 132 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 683 GAPEFESGIYTCQSDVYSFGVVMLELLT-GRKSYD 716
IYT QSDV+S+GV + EL+T G K YD
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 102/215 (47%), Gaps = 15/215 (6%)
Query: 509 NSFSQENLIGAGMLGSVYRA-QLPDGKLL----AVKKLDKRASSQQKDDEFLELVNNIDR 563
F + ++G+G G+VY+ +P+G+ + A+K+L + A+S + + E L+ +
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMAS 77
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+ + ++ L G C +L I + G L D + E K+N+ + + A+
Sbjct: 78 VDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVR---EHKDNIGSQYLLNWCVQIAKG 133
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS-QLSGHLLTAYGY 682
+ YL + +VHR+ + N+ V ++D GLA L+ + G +
Sbjct: 134 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 190
Query: 683 GAPEFESGIYTCQSDVYSFGVVMLELLT-GRKSYD 716
IYT QSDV+S+GV + EL+T G K YD
Sbjct: 191 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 102/215 (47%), Gaps = 15/215 (6%)
Query: 509 NSFSQENLIGAGMLGSVYRA-QLPDGKLL----AVKKLDKRASSQQKDDEFLELVNNIDR 563
F + ++G+G G+VY+ +P+G+ + A+K+L + A+S + + E L+ +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMAS 76
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+ + ++ L G C +L I + G L D + E K+N+ + + A+
Sbjct: 77 VDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVR---EHKDNIGSQYLLNWCVQIAKG 132
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS-QLSGHLLTAYGY 682
+ YL + +VHR+ + N+ V ++D GLA L+ + G +
Sbjct: 133 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 683 GAPEFESGIYTCQSDVYSFGVVMLELLT-GRKSYD 716
IYT QSDV+S+GV + EL+T G K YD
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 107/240 (44%), Gaps = 21/240 (8%)
Query: 491 KPFTTARSFTIASLQQYTNSFSQENLIGAGMLGSVY--RAQLPDGK--LLAVKKLDKRAS 546
+P RSFT + + E +IG+G G V R ++P + +A+K L +
Sbjct: 34 EPGRAGRSFT---REIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYT 90
Query: 547 SQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKN 606
+Q+ D FL + + + H NI+ L+G +++ EY NG+L L + D
Sbjct: 91 ERQRRD-FLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHD---G 146
Query: 607 NLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS- 665
+ + M G + YL ++ VHR+ + N+ VSD GL+ ++
Sbjct: 147 QFTIMQLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLED 203
Query: 666 --SGSVSQLSGHLLTAYGYGAPE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNR 721
+ + G + + APE ++ SDV+SFGVVM E+L G + Y NR
Sbjct: 204 DPDAAYTTTGGKIPIR--WTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR 261
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 118/277 (42%), Gaps = 35/277 (12%)
Query: 517 IGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
+G G G V + + +P G+++AVK++ +SQ++ ++L ++ + V G
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 118
Query: 576 CAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPI 635
G + E + +L + + + ++A+ +ALE+LH + +
Sbjct: 119 LFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS--KLSV 175
Query: 636 VHRNFKSANIXXXXXXAVSVSDCGL--------APLISSGSVSQLSGHLLTAYGYGAPEF 687
+HR+ K +N+ V + D G+ A I +G ++ + PE
Sbjct: 176 IHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERIN------PEL 229
Query: 688 ESGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPS 747
Y+ +SD++S G+ M+EL R YD W P L ++V+
Sbjct: 230 NQKGYSVKSDIWSLGITMIELAILRFPYD-----------SWGTP----FQQLKQVVEEP 274
Query: 748 LSGQYPAKSLS-HFADIISRCVQSEPEFRPPMSEVVQ 783
S Q PA S F D S+C++ + RP E++Q
Sbjct: 275 -SPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 100/222 (45%), Gaps = 24/222 (10%)
Query: 517 IGAGMLGSVYRAQL------PDGKLLAVKKLDKRASSQQKD-DEFLELVNNIDRIRHANI 569
+G G G V+ A+ D L+AVK L + + +KD EL+ N+ +H +I
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL---QHEHI 77
Query: 570 VELKGYCAEHGQRLLIYEYCSNGTLQDML--HSDDEL-------KNNLSWNTRIRMALGA 620
V+ G C E ++++EY +G L L H D + L+ + + +A
Sbjct: 78 VKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQI 137
Query: 621 ARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAY 680
A + YL VHR+ + N V + D G++ + S ++ GH +
Sbjct: 138 AAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 194
Query: 681 GYGAPE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRN 720
+ PE +T +SDV+S GVV+ E+ T G++ + + N
Sbjct: 195 RWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN 236
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 114/281 (40%), Gaps = 39/281 (13%)
Query: 515 NLIGAGMLGSVYRAQLP--DGKLL--AVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
++G G GSV L DG L AVK + SSQ++ +EFL + H N++
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 571 ELKGYCAEHGQR-----LLIYEYCSNGTLQD-MLHSDDEL-KNNLSWNTRIRMALGAARA 623
L G C E + ++I + G L +L+S E ++ T ++ + A
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYG 683
+EYL +HR+ + N V V+D GL+ I SG + +
Sbjct: 160 MEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWI 216
Query: 684 APE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALS 741
A E +YT +SDV++FGV M E+ T G Y +N
Sbjct: 217 AIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH-------------------- 256
Query: 742 RMVDPSLSG---QYPAKSLSHFADIISRCVQSEPEFRPPMS 779
M D L G + P L +I+ C +++P RP S
Sbjct: 257 EMYDYLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFS 297
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 102/215 (47%), Gaps = 15/215 (6%)
Query: 509 NSFSQENLIGAGMLGSVYRA-QLPDGKLL----AVKKLDKRASSQQKDDEFLELVNNIDR 563
F + ++G+G G+VY+ +P+G+ + A+K+L + A+S + + E L+ +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMAS 75
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+ + ++ L G C +L I + G L D + E K+N+ + + A+
Sbjct: 76 VDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVR---EHKDNIGSQYLLNWCVQIAKG 131
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS-QLSGHLLTAYGY 682
+ YL + +VHR+ + N+ V ++D GLA L+ + G +
Sbjct: 132 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 683 GAPEFESGIYTCQSDVYSFGVVMLELLT-GRKSYD 716
IYT QSDV+S+GV + EL+T G K YD
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 115/284 (40%), Gaps = 33/284 (11%)
Query: 517 IGAGMLGSVYRAQLPD------GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G VY D +AVK +++ AS +++ EFL + + ++V
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI-EFLNEASVMKGFTCHHVV 84
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHS-DDELKNNL-----SWNTRIRMALGAARAL 624
L G ++ L++ E ++G L+ L S E +NN + I+MA A +
Sbjct: 85 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 144
Query: 625 EYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGA 684
YL+ VHRN + N V + D G+ I + G L + A
Sbjct: 145 AYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 201
Query: 685 PE-FESGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRM 743
PE + G++T SD++SFGVV+ E+ + L L + L +
Sbjct: 202 PESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQVLKFV 246
Query: 744 VDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVD 787
+D Q P D++ C Q P RP E+V L D
Sbjct: 247 MDGGYLDQ-PDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKD 289
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 102/215 (47%), Gaps = 15/215 (6%)
Query: 509 NSFSQENLIGAGMLGSVYRA-QLPDGKLL----AVKKLDKRASSQQKDDEFLELVNNIDR 563
F + ++G+G G+VY+ +P+G+ + A+K+L + A+S + + E L+ +
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMAS 80
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+ + ++ L G C +L I + G L D + E K+N+ + + A+
Sbjct: 81 VDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVR---EHKDNIGSQYLLNWCVQIAKG 136
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS-QLSGHLLTAYGY 682
+ YL + +VHR+ + N+ V ++D GLA L+ + G +
Sbjct: 137 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 683 GAPEFESGIYTCQSDVYSFGVVMLELLT-GRKSYD 716
IYT QSDV+S+GV + EL+T G K YD
Sbjct: 194 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 102/215 (47%), Gaps = 15/215 (6%)
Query: 509 NSFSQENLIGAGMLGSVYRA-QLPDGKLL----AVKKLDKRASSQQKDDEFLELVNNIDR 563
F + ++G+G G+VY+ +P+G+ + A+K+L + A+S + + E L+ +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMAS 73
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+ + ++ L G C +L I + G L D + E K+N+ + + A+
Sbjct: 74 VDNPHVCRLLGICLTSTVQL-ITQLMPFGXLLDYVR---EHKDNIGSQYLLNWCVQIAKG 129
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS-QLSGHLLTAYGY 682
+ YL + +VHR+ + N+ V ++D GLA L+ + G +
Sbjct: 130 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 683 GAPEFESGIYTCQSDVYSFGVVMLELLT-GRKSYD 716
IYT QSDV+S+GV + EL+T G K YD
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 119/303 (39%), Gaps = 42/303 (13%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKL---LAVKKLDKRASSQQKDDEFLELVNNIDRIR 565
N +++IG G G V +A++ L A+K++ + AS D EL
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84
Query: 566 HANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNN------------LSWNTR 613
H NI+ L G C G L EY +G L D L L+ + LS
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 614 IRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGS---VS 670
+ A AR ++YL Q +HR+ + NI ++D GL S G V
Sbjct: 145 LHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGL----SRGQEVYVK 197
Query: 671 QLSGHLLTAYGYGAPEFESGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWA 730
+ G L + +YT SDV+S+GV++ E+++ + E +
Sbjct: 198 KTMGRLPVRW-MAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYE---K 253
Query: 731 IPQLHDIDALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIR 790
+PQ + ++ P D++ +C + +P RP ++++ L M+
Sbjct: 254 LPQGYRLEK-------------PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 300
Query: 791 RER 793
+
Sbjct: 301 ERK 303
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 102/215 (47%), Gaps = 15/215 (6%)
Query: 509 NSFSQENLIGAGMLGSVYRA-QLPDGKLL----AVKKLDKRASSQQKDDEFLELVNNIDR 563
F + ++G+G G+VY+ +P+G+ + A+K+L + A+S + + E L+ +
Sbjct: 25 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMAS 83
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+ + ++ L G C +L I + G L D + E K+N+ + + A+
Sbjct: 84 VDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVR---EHKDNIGSQYLLNWCVQIAKG 139
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS-QLSGHLLTAYGY 682
+ YL + +VHR+ + N+ V ++D GLA L+ + G +
Sbjct: 140 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 196
Query: 683 GAPEFESGIYTCQSDVYSFGVVMLELLT-GRKSYD 716
IYT QSDV+S+GV + EL+T G K YD
Sbjct: 197 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 231
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 102/215 (47%), Gaps = 15/215 (6%)
Query: 509 NSFSQENLIGAGMLGSVYRA-QLPDGKLL----AVKKLDKRASSQQKDDEFLELVNNIDR 563
F + ++G+G G+VY+ +P+G+ + A+K+L + A+S + + E L+ +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMAS 76
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+ + ++ L G C +L I + G L D + E K+N+ + + A+
Sbjct: 77 VDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVR---EHKDNIGSQYLLNWCVQIAKG 132
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS-QLSGHLLTAYGY 682
+ YL + +VHR+ + N+ V ++D GLA L+ + G +
Sbjct: 133 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 683 GAPEFESGIYTCQSDVYSFGVVMLELLT-GRKSYD 716
IYT QSDV+S+GV + EL+T G K YD
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 102/215 (47%), Gaps = 15/215 (6%)
Query: 509 NSFSQENLIGAGMLGSVYRA-QLPDGKLL----AVKKLDKRASSQQKDDEFLELVNNIDR 563
F + ++G+G G+VY+ +P+G+ + A+K+L + A+S + + E L+ +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMAS 73
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+ + ++ L G C +L I + G L D + E K+N+ + + A+
Sbjct: 74 VDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVR---EHKDNIGSQYLLNWCVQIAKG 129
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS-QLSGHLLTAYGY 682
+ YL + +VHR+ + N+ V ++D GLA L+ + G +
Sbjct: 130 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 683 GAPEFESGIYTCQSDVYSFGVVMLELLT-GRKSYD 716
IYT QSDV+S+GV + EL+T G K YD
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 102/215 (47%), Gaps = 15/215 (6%)
Query: 509 NSFSQENLIGAGMLGSVYRA-QLPDGKLL----AVKKLDKRASSQQKDDEFLELVNNIDR 563
F + ++G+G G+VY+ +P+G+ + A+K+L + A+S + + E L+ +
Sbjct: 40 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMAS 98
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+ + ++ L G C +L I + G L D + E K+N+ + + A+
Sbjct: 99 VDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVR---EHKDNIGSQYLLNWCVQIAKG 154
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS-QLSGHLLTAYGY 682
+ YL + +VHR+ + N+ V ++D GLA L+ + G +
Sbjct: 155 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 211
Query: 683 GAPEFESGIYTCQSDVYSFGVVMLELLT-GRKSYD 716
IYT QSDV+S+GV + EL+T G K YD
Sbjct: 212 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 246
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 102/215 (47%), Gaps = 15/215 (6%)
Query: 509 NSFSQENLIGAGMLGSVYRA-QLPDGKLL----AVKKLDKRASSQQKDDEFLELVNNIDR 563
F + ++G+G G+VY+ +P+G+ + A+K+L + A+S + + E L+ +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMAS 76
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+ + ++ L G C +L I + G L D + E K+N+ + + A+
Sbjct: 77 VDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVR---EHKDNIGSQYLLNWCVQIAKG 132
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS-QLSGHLLTAYGY 682
+ YL + +VHR+ + N+ V ++D GLA L+ + G +
Sbjct: 133 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 683 GAPEFESGIYTCQSDVYSFGVVMLELLT-GRKSYD 716
IYT QSDV+S+GV + EL+T G K YD
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 102/215 (47%), Gaps = 15/215 (6%)
Query: 509 NSFSQENLIGAGMLGSVYRA-QLPDGKLL----AVKKLDKRASSQQKDDEFLELVNNIDR 563
F + ++G+G G+VY+ +P+G+ + A+K+L + A+S + + E L+ +
Sbjct: 21 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMAS 79
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+ + ++ L G C +L I + G L D + E K+N+ + + A+
Sbjct: 80 VDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVR---EHKDNIGSQYLLNWCVQIAKG 135
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS-QLSGHLLTAYGY 682
+ YL + +VHR+ + N+ V ++D GLA L+ + G +
Sbjct: 136 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 192
Query: 683 GAPEFESGIYTCQSDVYSFGVVMLELLT-GRKSYD 716
IYT QSDV+S+GV + EL+T G K YD
Sbjct: 193 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 227
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 18/211 (8%)
Query: 514 ENLIGAGMLGSVY--RAQLPDGK--LLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
E +IG G G V R ++P + +A+K L + +Q+ D FL + + + H NI
Sbjct: 19 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRD-FLSEASIMGQFDHPNI 77
Query: 570 VELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
+ L+G + ++I EY NG+L L +D + + M G ++YL +
Sbjct: 78 IHLEGVVTKCKPVMIITEYMENGSLDAFLRKND---GRFTVIQLVGMLRGIGSGMKYLSD 134
Query: 630 ICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS---SGSVSQLSGHLLTAYGYGAPE 686
+ VHR+ + NI VSD G++ ++ + + G + + APE
Sbjct: 135 M---SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI--PIRWTAPE 189
Query: 687 -FESGIYTCQSDVYSFGVVMLELLT-GRKSY 715
+T SDV+S+G+VM E+++ G + Y
Sbjct: 190 AIAYRKFTSASDVWSYGIVMWEVMSYGERPY 220
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 102/215 (47%), Gaps = 15/215 (6%)
Query: 509 NSFSQENLIGAGMLGSVYRA-QLPDGKLL----AVKKLDKRASSQQKDDEFLELVNNIDR 563
F + ++G+G G+VY+ +P+G+ + A+K+L + A+S + + E L+ +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMAS 76
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+ + ++ L G C +L I + G L D + E K+N+ + + A+
Sbjct: 77 VDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVR---EHKDNIGSQYLLNWCVQIAKG 132
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS-QLSGHLLTAYGY 682
+ YL + +VHR+ + N+ V ++D GLA L+ + G +
Sbjct: 133 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 683 GAPEFESGIYTCQSDVYSFGVVMLELLT-GRKSYD 716
IYT QSDV+S+GV + EL+T G K YD
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 119/303 (39%), Gaps = 42/303 (13%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKL---LAVKKLDKRASSQQKDDEFLELVNNIDRIR 565
N +++IG G G V +A++ L A+K++ + AS D EL
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 74
Query: 566 HANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNN------------LSWNTR 613
H NI+ L G C G L EY +G L D L L+ + LS
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 614 IRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGS---VS 670
+ A AR ++YL Q +HR+ + NI ++D GL S G V
Sbjct: 135 LHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGL----SRGQEVYVK 187
Query: 671 QLSGHLLTAYGYGAPEFESGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWA 730
+ G L + +YT SDV+S+GV++ E+++ + E +
Sbjct: 188 KTMGRLPVRW-MAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYE---K 243
Query: 731 IPQLHDIDALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIR 790
+PQ + ++ P D++ +C + +P RP ++++ L M+
Sbjct: 244 LPQGYRLEK-------------PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 290
Query: 791 RER 793
+
Sbjct: 291 ERK 293
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 115/284 (40%), Gaps = 33/284 (11%)
Query: 517 IGAGMLGSVYRAQLPD------GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G VY D +AVK +++ AS +++ EFL + + ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI-EFLNEASVMKGFTCHHVV 83
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHS-DDELKNNL-----SWNTRIRMALGAARAL 624
L G ++ L++ E ++G L+ L S E +NN + I+MA A +
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 625 EYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGA 684
YL+ VHRN + N V + D G+ I + G L + A
Sbjct: 144 AYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 200
Query: 685 PE-FESGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRM 743
PE + G++T SD++SFGVV+ E+ + L L + L +
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQVLKFV 245
Query: 744 VDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVD 787
+D Q P D++ C Q P RP E+V L D
Sbjct: 246 MDGGYLDQ-PDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKD 288
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 102/215 (47%), Gaps = 15/215 (6%)
Query: 509 NSFSQENLIGAGMLGSVYRA-QLPDGKLL----AVKKLDKRASSQQKDDEFLELVNNIDR 563
F + ++G+G G+VY+ +P+G+ + A+K+L + A+S + + E L+ +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMAS 73
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+ + ++ L G C +L I + G L D + E K+N+ + + A+
Sbjct: 74 VDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVR---EHKDNIGSQYLLNWCVQIAKG 129
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS-QLSGHLLTAYGY 682
+ YL + +VHR+ + N+ V ++D GLA L+ + G +
Sbjct: 130 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 683 GAPEFESGIYTCQSDVYSFGVVMLELLT-GRKSYD 716
IYT QSDV+S+GV + EL+T G K YD
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 18/211 (8%)
Query: 514 ENLIGAGMLGSVY--RAQLPDGK--LLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
E +IG G G V R ++P + +A+K L + +Q+ D FL + + + H NI
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRD-FLSEASIMGQFDHPNI 71
Query: 570 VELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
+ L+G + ++I EY NG+L L +D + + M G ++YL +
Sbjct: 72 IHLEGVVTKCKPVMIITEYMENGSLDAFLRKND---GRFTVIQLVGMLRGIGSGMKYLSD 128
Query: 630 ICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS---SGSVSQLSGHLLTAYGYGAPE 686
+ VHR+ + NI VSD G++ ++ + + G + + APE
Sbjct: 129 M---SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI--PIRWTAPE 183
Query: 687 -FESGIYTCQSDVYSFGVVMLELLT-GRKSY 715
+T SDV+S+G+VM E+++ G + Y
Sbjct: 184 AIAYRKFTSASDVWSYGIVMWEVMSYGERPY 214
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 116/284 (40%), Gaps = 33/284 (11%)
Query: 517 IGAGMLGSVYRAQLPD------GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G VY D +AVK +++ AS +++ EFL + + ++V
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI-EFLNEASVMKGFTCHHVV 80
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHS-DDELKNNL-----SWNTRIRMALGAARAL 624
L G ++ L++ E ++G L+ L S E +NN + I+MA A +
Sbjct: 81 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 140
Query: 625 EYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGA 684
YL+ VHR+ + N V + D G+ I + G L + A
Sbjct: 141 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 197
Query: 685 PE-FESGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRM 743
PE + G++T SD++SFGVV+ E+ + L L + L +
Sbjct: 198 PESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQVLKFV 242
Query: 744 VDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVD 787
+D Q P D++ C Q P+ RP E+V L D
Sbjct: 243 MDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKD 285
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 116/276 (42%), Gaps = 33/276 (11%)
Query: 516 LIGAGMLGSVYRAQL--PDGKLL--AVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+IG G G VY L DGK + AVK L+ R + + +FL + H N++
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 572 LKGYCAE-HGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
L G C G L++ Y +G L++ + ++ +N + I L A+ ++YL
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKYL--- 148
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI---SSGSVSQLSGHLLTAYGYGAPEF 687
VHR+ + N V V+D GLA + SV +G L
Sbjct: 149 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESL 208
Query: 688 ESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDP 746
++ +T +SDV+SFGV++ EL+T G Y P ++ D ++
Sbjct: 209 QTQKFTTKSDVWSFGVLLWELMTRGAPPY----------------PDVNTFDITVYLLQG 252
Query: 747 SLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVV 782
Q P +++ +C + E RP SE+V
Sbjct: 253 RRLLQ-PEYCPDPLYEVMLKCWHPKAEMRPSFSELV 287
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 102/215 (47%), Gaps = 15/215 (6%)
Query: 509 NSFSQENLIGAGMLGSVYRA-QLPDGKLL----AVKKLDKRASSQQKDDEFLELVNNIDR 563
F + ++G+G G+VY+ +P+G+ + A+K+L + A+S + + E L+ +
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMAS 67
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+ + ++ L G C +L I + G L D + E K+N+ + + A+
Sbjct: 68 VDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVR---EHKDNIGSQYLLNWCVQIAKG 123
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS-QLSGHLLTAYGY 682
+ YL + +VHR+ + N+ V ++D GLA L+ + G +
Sbjct: 124 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 180
Query: 683 GAPEFESGIYTCQSDVYSFGVVMLELLT-GRKSYD 716
IYT QSDV+S+GV + EL+T G K YD
Sbjct: 181 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 215
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 117/282 (41%), Gaps = 51/282 (18%)
Query: 516 LIGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKG 574
++G G G + G+++ +K+L + Q+ FL+ V + + H N+++ G
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRT--FLKEVKVMRCLEHPNVLKFIG 74
Query: 575 YCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPP 634
+ + I EY GTL+ ++ S D + W+ R+ A A + YLH +
Sbjct: 75 VLYKDKRLNFITEYIKGGTLRGIIKSMD---SQYPWSQRVSFAKDIASGMAYLHSM---N 128
Query: 635 IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSG----------HLLTAYG--- 681
I+HR+ S N V V+D GLA L+ +Q G T G
Sbjct: 129 IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEK-TQPEGLRSLKKPDRKKRYTVVGNPY 187
Query: 682 YGAPEFESG-IYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDAL 740
+ APE +G Y + DV+SFG+V+ E++ GR + D D L
Sbjct: 188 WMAPEMINGRSYDEKVDVFSFGIVLCEII-GRVNADP--------------------DYL 226
Query: 741 SRMVDPSLSGQ------YPAKSLSHFADIISRCVQSEPEFRP 776
R +D L+ + P F I RC +PE RP
Sbjct: 227 PRTMDFGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRP 268
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 116/284 (40%), Gaps = 33/284 (11%)
Query: 517 IGAGMLGSVYRAQLPD------GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G VY D +AVK +++ AS +++ EFL + + ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI-EFLNEASVMKGFTCHHVV 83
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHS-DDELKNNL-----SWNTRIRMALGAARAL 624
L G ++ L++ E ++G L+ L S E +NN + I+MA A +
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 625 EYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGA 684
YL+ VHR+ + N V + D G+ I + G L + A
Sbjct: 144 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 200
Query: 685 PE-FESGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRM 743
PE + G++T SD++SFGVV+ E+ + L L + L +
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQVLKFV 245
Query: 744 VDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVD 787
+D Q P D++ C Q P+ RP E+V L D
Sbjct: 246 MDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKD 288
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 113/278 (40%), Gaps = 43/278 (15%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
+G+G G V + +AVK + + + S +DEF + + ++ H +V+ G C
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMS---EDEFFQEAQTMMKLSHPKLVKFYGVC 72
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQ---- 632
++ ++ EY SNG L + L S + L ++ LE +++C+
Sbjct: 73 SKEYPIYIVTEYISNGCLLNYLRSHGK-------------GLEPSQLLEMCYDVCEGMAF 119
Query: 633 ---PPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FE 688
+HR+ + N V VSD G+ + G + APE F
Sbjct: 120 LESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPV-KWSAPEVFH 178
Query: 689 SGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPS 747
Y+ +SDV++FG++M E+ + G+ YD N V + Q H R+ P
Sbjct: 179 YFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSE----VVLKVSQGH------RLYRPH 228
Query: 748 LSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDL 785
L+ I+ C PE RP +++ +
Sbjct: 229 LAS-------DTIYQIMYSCWHELPEKRPTFQQLLSSI 259
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 117/284 (41%), Gaps = 33/284 (11%)
Query: 517 IGAGMLGSVYRAQLPD------GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G VY D +AVK +++ AS +++ EFL + + ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI-EFLNEASVMKGFTCHHVV 83
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHS-DDELKNNL-----SWNTRIRMALGAARAL 624
L G ++ L++ E ++G L+ L S E +NN + I+MA A +
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 625 EYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGA 684
YL+ VHR+ + N V + D G+ I + + G L + A
Sbjct: 144 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMA 200
Query: 685 PE-FESGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRM 743
PE + G++T SD++SFGVV+ E+ + L L + L +
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQVLKFV 245
Query: 744 VDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVD 787
+D Q P D++ C Q P+ RP E+V L D
Sbjct: 246 MDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKD 288
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 115/284 (40%), Gaps = 33/284 (11%)
Query: 517 IGAGMLGSVYRAQLPD------GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G VY D +AVK +++ AS +++ EFL + + ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI-EFLNEASVMKGFTCHHVV 83
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHS-DDELKNNL-----SWNTRIRMALGAARAL 624
L G ++ L++ E ++G L+ L S E +NN + I+MA A +
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 625 EYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGA 684
YL+ VHR+ + N V + D G+ I + G L + A
Sbjct: 144 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 200
Query: 685 PE-FESGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRM 743
PE + G++T SD++SFGVV+ E+ + L L + L +
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQVLKFV 245
Query: 744 VDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVD 787
+D Q P D++ C Q P RP E+V L D
Sbjct: 246 MDGGYLDQ-PDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKD 288
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 116/275 (42%), Gaps = 31/275 (11%)
Query: 516 LIGAGMLGSVYRAQL--PDGKLL--AVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+IG G G VY L DGK + AVK L+ R + + +FL + H N++
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 572 LKGYCAE-HGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
L G C G L++ Y +G L++ + ++ +N + I L A+ ++YL
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKYL--- 149
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSG---SVSQLSGHLLTAYGYGAPEF 687
VHR+ + N V V+D GLA + SV +G L
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 209
Query: 688 ESGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPS 747
++ +T +SDV+SFGV++ EL+T RG P ++ D ++
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMT----------RGAP-----PYPDVNTFDITVYLLQGR 254
Query: 748 LSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVV 782
Q P +++ +C + E RP SE+V
Sbjct: 255 RLLQ-PEYCPDPLYEVMLKCWHPKAEMRPSFSELV 288
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 116/275 (42%), Gaps = 31/275 (11%)
Query: 516 LIGAGMLGSVYRAQL--PDGKLL--AVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+IG G G VY L DGK + AVK L+ R + + +FL + H N++
Sbjct: 55 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVLS 113
Query: 572 LKGYCAE-HGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
L G C G L++ Y +G L++ + ++ +N + I L A+ ++YL
Sbjct: 114 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKYL--- 167
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSG---SVSQLSGHLLTAYGYGAPEF 687
VHR+ + N V V+D GLA + SV +G L
Sbjct: 168 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 227
Query: 688 ESGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPS 747
++ +T +SDV+SFGV++ EL+T RG P ++ D ++
Sbjct: 228 QTQKFTTKSDVWSFGVLLWELMT----------RGAP-----PYPDVNTFDITVYLLQGR 272
Query: 748 LSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVV 782
Q P +++ +C + E RP SE+V
Sbjct: 273 RLLQ-PEYCPDPLYEVMLKCWHPKAEMRPSFSELV 306
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 123/291 (42%), Gaps = 35/291 (12%)
Query: 509 NSFSQENLIGAGMLGSVY--RAQLPDGKLL--AVKKLDKRASSQQKDDEFLELVNNIDRI 564
+ S + ++GAG G V R +LP K + A+K L + +Q+ D FL + + +
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD-FLGEASIMGQF 103
Query: 565 RHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARAL 624
H NI+ L+G + +++ E NG+L L D + + M G A +
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDA---QFTVIQLVGMLRGIASGM 160
Query: 625 EYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS---SGSVSQLSGHLLTAYG 681
+YL ++ VHR+ + NI VSD GL+ ++ + + G +
Sbjct: 161 KYLSDMGA---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIR 215
Query: 682 YGAPE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDA 739
+ +PE +T SDV+S+G+V+ E+++ G + Y W + I A
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------WEMSNQDVIKA 262
Query: 740 LSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIR 790
VD P + ++ C Q + RP ++V L +IR
Sbjct: 263 ----VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 116/284 (40%), Gaps = 33/284 (11%)
Query: 517 IGAGMLGSVYRAQLPD------GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G VY D +AVK +++ AS +++ EFL + + ++V
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI-EFLNEASVMKGFTCHHVV 82
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHS-DDELKNNL-----SWNTRIRMALGAARAL 624
L G ++ L++ E ++G L+ L S E +NN + I+MA A +
Sbjct: 83 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 142
Query: 625 EYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGA 684
YL+ VHR+ + N V + D G+ I + G L + A
Sbjct: 143 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 199
Query: 685 PE-FESGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRM 743
PE + G++T SD++SFGVV+ E+ + L L + L +
Sbjct: 200 PESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQVLKFV 244
Query: 744 VDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVD 787
+D Q P D++ C Q P+ RP E+V L D
Sbjct: 245 MDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKD 287
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 116/275 (42%), Gaps = 31/275 (11%)
Query: 516 LIGAGMLGSVYRAQL--PDGKLL--AVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+IG G G VY L DGK + AVK L+ R + + +FL + H N++
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 572 LKGYCAE-HGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
L G C G L++ Y +G L++ + ++ +N + I L A+ ++YL
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKYL--- 148
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSG---SVSQLSGHLLTAYGYGAPEF 687
VHR+ + N V V+D GLA + SV +G L
Sbjct: 149 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 208
Query: 688 ESGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPS 747
++ +T +SDV+SFGV++ EL+T RG P ++ D ++
Sbjct: 209 QTQKFTTKSDVWSFGVLLWELMT----------RGAP-----PYPDVNTFDITVYLLQGR 253
Query: 748 LSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVV 782
Q P +++ +C + E RP SE+V
Sbjct: 254 RLLQ-PEYCPDPLYEVMLKCWHPKAEMRPSFSELV 287
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 115/271 (42%), Gaps = 23/271 (8%)
Query: 517 IGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
+G G G V + + +P G+++AVK++ +SQ++ ++L ++ + V G
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 74
Query: 576 CAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPI 635
G + E + +L + + + ++A+ +ALE+LH + +
Sbjct: 75 LFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS--KLSV 131
Query: 636 VHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHL--LTAYGYGAPEFESGIYT 693
+HR+ K +N+ V + D G++ + + A PE Y+
Sbjct: 132 IHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYS 191
Query: 694 CQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSLSGQYP 753
+SD++S G+ M+EL R YD W P L ++V+ S Q P
Sbjct: 192 VKSDIWSLGITMIELAILRFPYD-----------SWGTP----FQQLKQVVEEP-SPQLP 235
Query: 754 AKSLS-HFADIISRCVQSEPEFRPPMSEVVQ 783
A S F D S+C++ + RP E++Q
Sbjct: 236 ADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 116/284 (40%), Gaps = 33/284 (11%)
Query: 517 IGAGMLGSVYRAQLPD------GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G VY D +AVK +++ AS +++ EFL + + ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI-EFLNEASVMKGFTCHHVV 83
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHS-DDELKNNL-----SWNTRIRMALGAARAL 624
L G ++ L++ E ++G L+ L S E +NN + I+MA A +
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 625 EYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGA 684
YL+ VHR+ + N V + D G+ I + G L + A
Sbjct: 144 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 200
Query: 685 PE-FESGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRM 743
PE + G++T SD++SFGVV+ E+ + L L + L +
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQVLKFV 245
Query: 744 VDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVD 787
+D Q P D++ C Q P+ RP E+V L D
Sbjct: 246 MDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKD 288
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 101/215 (46%), Gaps = 15/215 (6%)
Query: 509 NSFSQENLIGAGMLGSVYRA-QLPDGKLL----AVKKLDKRASSQQKDDEFLELVNNIDR 563
F + ++G+G G+VY+ +P+G+ + A+K+L + A+S + + E L+ +
Sbjct: 12 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMAS 70
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+ + ++ L G C +L I + G L D + E K+N+ + + A
Sbjct: 71 VDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVR---EHKDNIGSQYLLNWCVQIAEG 126
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS-QLSGHLLTAYGY 682
+ YL + +VHR+ + N+ V ++D GLA L+ + G +
Sbjct: 127 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 183
Query: 683 GAPEFESGIYTCQSDVYSFGVVMLELLT-GRKSYD 716
IYT QSDV+S+GV + EL+T G K YD
Sbjct: 184 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 218
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 116/275 (42%), Gaps = 31/275 (11%)
Query: 516 LIGAGMLGSVYRAQL--PDGKLL--AVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+IG G G VY L DGK + AVK L+ R + + +FL + H N++
Sbjct: 34 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVLS 92
Query: 572 LKGYCAE-HGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
L G C G L++ Y +G L++ + ++ +N + I L A+ ++YL
Sbjct: 93 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKYL--- 146
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSG---SVSQLSGHLLTAYGYGAPEF 687
VHR+ + N V V+D GLA + SV +G L
Sbjct: 147 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 206
Query: 688 ESGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPS 747
++ +T +SDV+SFGV++ EL+T RG P ++ D ++
Sbjct: 207 QTQKFTTKSDVWSFGVLLWELMT----------RGAP-----PYPDVNTFDITVYLLQGR 251
Query: 748 LSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVV 782
Q P +++ +C + E RP SE+V
Sbjct: 252 RLLQ-PEYCPDPLYEVMLKCWHPKAEMRPSFSELV 285
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 116/275 (42%), Gaps = 31/275 (11%)
Query: 516 LIGAGMLGSVYRAQL--PDGKLL--AVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+IG G G VY L DGK + AVK L+ R + + +FL + H N++
Sbjct: 29 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVLS 87
Query: 572 LKGYCAE-HGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
L G C G L++ Y +G L++ + ++ +N + I L A+ ++YL
Sbjct: 88 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKYL--- 141
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSG---SVSQLSGHLLTAYGYGAPEF 687
VHR+ + N V V+D GLA + SV +G L
Sbjct: 142 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 201
Query: 688 ESGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPS 747
++ +T +SDV+SFGV++ EL+T RG P ++ D ++
Sbjct: 202 QTQKFTTKSDVWSFGVLLWELMT----------RGAP-----PYPDVNTFDITVYLLQGR 246
Query: 748 LSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVV 782
Q P +++ +C + E RP SE+V
Sbjct: 247 RLLQ-PEYCPDPLYEVMLKCWHPKAEMRPSFSELV 280
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 116/275 (42%), Gaps = 31/275 (11%)
Query: 516 LIGAGMLGSVYRAQL--PDGKLL--AVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+IG G G VY L DGK + AVK L+ R + + +FL + H N++
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 572 LKGYCAE-HGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
L G C G L++ Y +G L++ + ++ +N + I L A+ ++YL
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKYL--- 147
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSG---SVSQLSGHLLTAYGYGAPEF 687
VHR+ + N V V+D GLA + SV +G L
Sbjct: 148 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 207
Query: 688 ESGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPS 747
++ +T +SDV+SFGV++ EL+T RG P ++ D ++
Sbjct: 208 QTQKFTTKSDVWSFGVLLWELMT----------RGAP-----PYPDVNTFDITVYLLQGR 252
Query: 748 LSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVV 782
Q P +++ +C + E RP SE+V
Sbjct: 253 RLLQ-PEYCPDPLYEVMLKCWHPKAEMRPSFSELV 286
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 116/275 (42%), Gaps = 31/275 (11%)
Query: 516 LIGAGMLGSVYRAQL--PDGKLL--AVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+IG G G VY L DGK + AVK L+ R + + +FL + H N++
Sbjct: 56 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVLS 114
Query: 572 LKGYCAE-HGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
L G C G L++ Y +G L++ + ++ +N + I L A+ ++YL
Sbjct: 115 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKYL--- 168
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSG---SVSQLSGHLLTAYGYGAPEF 687
VHR+ + N V V+D GLA + SV +G L
Sbjct: 169 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 228
Query: 688 ESGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPS 747
++ +T +SDV+SFGV++ EL+T RG P ++ D ++
Sbjct: 229 QTQKFTTKSDVWSFGVLLWELMT----------RGAP-----PYPDVNTFDITVYLLQGR 273
Query: 748 LSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVV 782
Q P +++ +C + E RP SE+V
Sbjct: 274 RLLQ-PEYCPDPLYEVMLKCWHPKAEMRPSFSELV 307
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 116/275 (42%), Gaps = 31/275 (11%)
Query: 516 LIGAGMLGSVYRAQL--PDGKLL--AVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+IG G G VY L DGK + AVK L+ R + + +FL + H N++
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 572 LKGYCAE-HGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
L G C G L++ Y +G L++ + ++ +N + I L A+ ++YL
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKYL--- 149
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSG---SVSQLSGHLLTAYGYGAPEF 687
VHR+ + N V V+D GLA + SV +G L
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 209
Query: 688 ESGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPS 747
++ +T +SDV+SFGV++ EL+T RG P ++ D ++
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMT----------RGAP-----PYPDVNTFDITVYLLQGR 254
Query: 748 LSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVV 782
Q P +++ +C + E RP SE+V
Sbjct: 255 RLLQ-PEYCPDPLYEVMLKCWHPKAEMRPSFSELV 288
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 116/275 (42%), Gaps = 31/275 (11%)
Query: 516 LIGAGMLGSVYRAQL--PDGKLL--AVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+IG G G VY L DGK + AVK L+ R + + +FL + H N++
Sbjct: 32 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVLS 90
Query: 572 LKGYCAE-HGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
L G C G L++ Y +G L++ + ++ +N + I L A+ ++YL
Sbjct: 91 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKYL--- 144
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSG---SVSQLSGHLLTAYGYGAPEF 687
VHR+ + N V V+D GLA + SV +G L
Sbjct: 145 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 204
Query: 688 ESGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPS 747
++ +T +SDV+SFGV++ EL+T RG P ++ D ++
Sbjct: 205 QTQKFTTKSDVWSFGVLLWELMT----------RGAP-----PYPDVNTFDITVYLLQGR 249
Query: 748 LSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVV 782
Q P +++ +C + E RP SE+V
Sbjct: 250 RLLQ-PEYCPDPLYEVMLKCWHPKAEMRPSFSELV 283
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 17/202 (8%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDE-----FLELVNNIDRIRHANIVE 571
+G G + +VY L + +L +K K ++ E F V+N ++ H NIV
Sbjct: 19 LGGGGMSTVY---LAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVS 75
Query: 572 LKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEIC 631
+ E L+ EY TL + + S LS +T I +++ H++
Sbjct: 76 MIDVDEEDDCYYLVMEYIEGPTLSEYIES----HGPLSVDTAINFTNQILDGIKHAHDM- 130
Query: 632 QPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESGI 691
IVHR+ K NI + + D G+A +S S++Q + H+L Y +PE G
Sbjct: 131 --RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ-TNHVLGTVQYFSPEQAKGE 187
Query: 692 YTCQ-SDVYSFGVVMLELLTGR 712
T + +D+YS G+V+ E+L G
Sbjct: 188 ATDECTDIYSIGIVLYEMLVGE 209
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 123/291 (42%), Gaps = 35/291 (12%)
Query: 509 NSFSQENLIGAGMLGSVY--RAQLPDGKLL--AVKKLDKRASSQQKDDEFLELVNNIDRI 564
+ S + ++GAG G V R +LP K + A+K L + +Q+ D FL + + +
Sbjct: 16 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD-FLGEASIMGQF 74
Query: 565 RHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARAL 624
H NI+ L+G + +++ E NG+L L D + + M G A +
Sbjct: 75 DHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDA---QFTVIQLVGMLRGIASGM 131
Query: 625 EYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS---SGSVSQLSGHLLTAYG 681
+YL ++ VHR+ + NI VSD GL+ ++ + + G +
Sbjct: 132 KYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIR 186
Query: 682 YGAPE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDA 739
+ +PE +T SDV+S+G+V+ E+++ G + Y W + I A
Sbjct: 187 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------WEMSNQDVIKA 233
Query: 740 LSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIR 790
VD P + ++ C Q + RP ++V L +IR
Sbjct: 234 ----VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 280
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 123/291 (42%), Gaps = 35/291 (12%)
Query: 509 NSFSQENLIGAGMLGSVY--RAQLPDGKLL--AVKKLDKRASSQQKDDEFLELVNNIDRI 564
+ S + ++GAG G V R +LP K + A+K L + +Q+ D FL + + +
Sbjct: 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD-FLGEASIMGQF 103
Query: 565 RHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARAL 624
H NI+ L+G + +++ E NG+L L D + + M G A +
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDA---QFTVIQLVGMLRGIASGM 160
Query: 625 EYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS---SGSVSQLSGHLLTAYG 681
+YL ++ VHR+ + NI VSD GL+ ++ + + G +
Sbjct: 161 KYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIR 215
Query: 682 YGAPE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDA 739
+ +PE +T SDV+S+G+V+ E+++ G + Y W + I A
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------------WEMSNQDVIKA 262
Query: 740 LSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIR 790
VD P + ++ C Q + RP ++V L +IR
Sbjct: 263 ----VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 101/217 (46%), Gaps = 41/217 (18%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLEL-VNNIDRIRHANIVELKGY 575
+G G G V+R L G+ +AVK SS+ + F E + N +RH NI+ G+
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIF----SSRDEQSWFRETEIYNTVLLRHDNIL---GF 67
Query: 576 CAE-------HGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
A Q LI Y +G+L D L + L + +R+A+ AA L +LH
Sbjct: 68 IASDMTSRNSSTQLWLITHYHEHGSLYDFLQ-----RQTLEPHLALRLAVSAACGLAHLH 122
Query: 629 -EIC----QPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGH--LLTAYG 681
EI +P I HR+FKS N+ ++D GLA + S GS G+ +
Sbjct: 123 VEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKR 182
Query: 682 YGAPE----------FESGIYTCQSDVYSFGVVMLEL 708
Y APE FES +T D+++FG+V+ E+
Sbjct: 183 YMAPEVLDEQIRTDCFESYKWT---DIWAFGLVLWEI 216
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 133/304 (43%), Gaps = 47/304 (15%)
Query: 510 SFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKK------LDKRASSQQKDDEFLELVNNID 562
+F E IG G VYRA L DG +A+KK +D +A + + ++ ++ +
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARA-----DCIKEIDLLK 87
Query: 563 RIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAAR 622
++ H N+++ E + ++ E G L M+ + K + T + +
Sbjct: 88 QLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCS 147
Query: 623 ALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGY 682
ALE++H ++HR+ K AN+ V + D GL SS + + S L+ Y
Sbjct: 148 ALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS--LVGTPYY 202
Query: 683 GAPE--FESGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDAL 740
+PE E+G Y +SD++S G ++ E+ + + G++ + ++ D
Sbjct: 203 MSPERIHENG-YNFKSDIWSLGCLLYEMAALQSPF-----YGDKMNLYSLCKKIEQCD-- 254
Query: 741 SRMVDPSLSGQYPAKSLSHFAD----IISRCVQSEPEFRPPMSEVVQDLVDMIRR-ERCS 795
YP H+++ +++ C+ +PE RP ++ V D+ +R C+
Sbjct: 255 -----------YPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYV----YDVAKRMHACT 299
Query: 796 NESL 799
SL
Sbjct: 300 ASSL 303
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 94/210 (44%), Gaps = 31/210 (14%)
Query: 517 IGAGMLGSVYRAQ---LPD--GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+G G GSV + L D G+++AVKKL +D F + + ++H NIV+
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD--FEREIEILKSLQHDNIVK 78
Query: 572 LKGYCAEHGQR--LLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
KG C G+R LI E+ G+L++ L E +++ + L+Y +
Sbjct: 79 YKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHI-------------KLLQYTSQ 125
Query: 630 ICQ-------PPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI-SSGSVSQLSGHLLTAYG 681
IC+ +HR+ + NI V + D GL ++ ++ +
Sbjct: 126 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF 185
Query: 682 YGAPE-FESGIYTCQSDVYSFGVVMLELLT 710
+ APE ++ SDV+SFGVV+ EL T
Sbjct: 186 WYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 121/295 (41%), Gaps = 41/295 (13%)
Query: 517 IGAGMLGSVYRAQL------PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G VY Q+ P +AVK L + S Q + D +E + I ++ H NIV
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI-ISKLNHQNIV 111
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHSD---DELKNNLSWNTRIRMALGAARALEYL 627
G + R ++ E + G L+ L ++L+ + +A A +YL
Sbjct: 112 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 628 HEICQPPIVHRNFKSANIXXXXX---XAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGA 684
E +HR+ + N + D G+A I S + G + +
Sbjct: 172 EE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 228
Query: 685 PE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSR 742
PE F GI+T ++D +SFGV++ E+ + G Y N+ L + + R
Sbjct: 229 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE----------VLEFVTSGGR 278
Query: 743 MVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIRRERCSNE 797
M DP P I+++C Q +PE RP + +++ R E C+ +
Sbjct: 279 M-DP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILE------RIEYCTQD 320
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 101/215 (46%), Gaps = 15/215 (6%)
Query: 509 NSFSQENLIGAGMLGSVYRA-QLPDGKLL----AVKKLDKRASSQQKDDEFLELVNNIDR 563
F + ++G+G G+VY+ +P+G+ + A+ +L + A+S + + E L+ +
Sbjct: 49 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMEL-REATSPKANKEILDEAYVMAS 107
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+ + ++ L G C +L I + G L D + E K+N+ + + A+
Sbjct: 108 VDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVR---EHKDNIGSQYLLNWCVQIAKG 163
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS-QLSGHLLTAYGY 682
+ YL + +VHR+ + N+ V ++D GLA L+ + G +
Sbjct: 164 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 220
Query: 683 GAPEFESGIYTCQSDVYSFGVVMLELLT-GRKSYD 716
IYT QSDV+S+GV + EL+T G K YD
Sbjct: 221 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 255
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 121/295 (41%), Gaps = 41/295 (13%)
Query: 517 IGAGMLGSVYRAQL------PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G VY Q+ P +AVK L + S Q + D +E + I ++ H NIV
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI-ISKLNHQNIV 97
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHSD---DELKNNLSWNTRIRMALGAARALEYL 627
G + R ++ E + G L+ L ++L+ + +A A +YL
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 628 HEICQPPIVHRNFKSANIXXXXX---XAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGA 684
E +HR+ + N + D G+A I S + G + +
Sbjct: 158 EE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 214
Query: 685 PE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSR 742
PE F GI+T ++D +SFGV++ E+ + G Y N+ L + + R
Sbjct: 215 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE----------VLEFVTSGGR 264
Query: 743 MVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIRRERCSNE 797
M DP P I+++C Q +PE RP + +++ R E C+ +
Sbjct: 265 M-DP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILE------RIEYCTQD 306
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 101/215 (46%), Gaps = 15/215 (6%)
Query: 509 NSFSQENLIGAGMLGSVYRA-QLPDGKLL----AVKKLDKRASSQQKDDEFLELVNNIDR 563
F + ++G+G G+VY+ +P+G+ + A+K+L + A+S + + E L+ +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMAS 75
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+ + ++ L G C +L I + G L D + E K+N+ + + A+
Sbjct: 76 VDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVR---EHKDNIGSQYLLNWCVQIAKG 131
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS-QLSGHLLTAYGY 682
+ YL + +VHR+ + N+ V ++D G A L+ + G +
Sbjct: 132 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 683 GAPEFESGIYTCQSDVYSFGVVMLELLT-GRKSYD 716
IYT QSDV+S+GV + EL+T G K YD
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 101/215 (46%), Gaps = 15/215 (6%)
Query: 509 NSFSQENLIGAGMLGSVYRA-QLPDGKLL----AVKKLDKRASSQQKDDEFLELVNNIDR 563
F + ++G+G G+VY+ +P+G+ + A+K+L + A+S + + E L+ +
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMAS 77
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+ + ++ L G C +L I + G L D + E K+N+ + + A+
Sbjct: 78 VDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVR---EHKDNIGSQYLLNWCVQIAKG 133
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS-QLSGHLLTAYGY 682
+ YL + +VHR+ + N+ V ++D G A L+ + G +
Sbjct: 134 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 190
Query: 683 GAPEFESGIYTCQSDVYSFGVVMLELLT-GRKSYD 716
IYT QSDV+S+GV + EL+T G K YD
Sbjct: 191 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 101/215 (46%), Gaps = 15/215 (6%)
Query: 509 NSFSQENLIGAGMLGSVYRA-QLPDGKLL----AVKKLDKRASSQQKDDEFLELVNNIDR 563
F + ++G+G G+VY+ +P+G+ + A+K+L + A+S + + E L+ +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMAS 75
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+ + ++ L G C +L I + G L D + E K+N+ + + A+
Sbjct: 76 VDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVR---EHKDNIGSQYLLNWCVQIAKG 131
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS-QLSGHLLTAYGY 682
+ YL + +VHR+ + N+ V ++D G A L+ + G +
Sbjct: 132 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 683 GAPEFESGIYTCQSDVYSFGVVMLELLT-GRKSYD 716
IYT QSDV+S+GV + EL+T G K YD
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 116/275 (42%), Gaps = 31/275 (11%)
Query: 516 LIGAGMLGSVYRAQL--PDGKLL--AVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+IG G G VY L DGK + AVK L+ R + + +FL + H N++
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 572 LKGYCAE-HGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
L G C G L++ Y +G L++ + ++ +N + I L A+ +++L
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKFL--- 149
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSG---SVSQLSGHLLTAYGYGAPEF 687
VHR+ + N V V+D GLA + SV +G L
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 209
Query: 688 ESGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPS 747
++ +T +SDV+SFGV++ EL+T RG P ++ D ++
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMT----------RGAP-----PYPDVNTFDITVYLLQGR 254
Query: 748 LSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVV 782
Q P +++ +C + E RP SE+V
Sbjct: 255 RLLQ-PEYCPDPLYEVMLKCWHPKAEMRPSFSELV 288
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 101/215 (46%), Gaps = 15/215 (6%)
Query: 509 NSFSQENLIGAGMLGSVYRA-QLPDGKLL----AVKKLDKRASSQQKDDEFLELVNNIDR 563
F + ++ +G G+VY+ +P+G+ + A+K+L + A+S + + E L+ +
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMAS 80
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+ + ++ L G C +L I + G L D + E K+N+ + + A+
Sbjct: 81 VDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVR---EHKDNIGSQYLLNWCVQIAKG 136
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS-QLSGHLLTAYGY 682
+ YL + +VHR+ + N+ V ++D GLA L+ + G +
Sbjct: 137 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 683 GAPEFESGIYTCQSDVYSFGVVMLELLT-GRKSYD 716
IYT QSDV+S+GV + EL+T G K YD
Sbjct: 194 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 118/284 (41%), Gaps = 37/284 (13%)
Query: 517 IGAGMLGSVYRA-------QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
+G G G VY P+ ++ A+K +++ AS +++ EFL + + ++
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRV-AIKTVNEAASMRERI-EFLNEASVMKEFNCHHV 75
Query: 570 VELKGYCAEHGQRLLIYEYCSNGTLQDMLHS-DDELKNNL-----SWNTRIRMALGAARA 623
V L G ++ L+I E + G L+ L S E++NN S + I+MA A
Sbjct: 76 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 135
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYG 683
+ YL+ VHR+ + N V + D G+ I + G L +
Sbjct: 136 MAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 192
Query: 684 APE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALS 741
+PE + G++T SDV+SFGVV+ E+ T + Y N EQ L
Sbjct: 193 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN--EQVL--------------- 235
Query: 742 RMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDL 785
R V P +++ C Q P+ RP E++ +
Sbjct: 236 RFVMEGGLLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEIISSI 279
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 116/275 (42%), Gaps = 31/275 (11%)
Query: 516 LIGAGMLGSVYRAQL--PDGKLL--AVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+IG G G VY L DGK + AVK L+ R + + +FL + H N++
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 572 LKGYCAE-HGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
L G C G L++ Y +G L++ + ++ +N + I L A+ +++L
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKFL--- 147
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSG---SVSQLSGHLLTAYGYGAPEF 687
VHR+ + N V V+D GLA + SV +G L
Sbjct: 148 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 207
Query: 688 ESGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPS 747
++ +T +SDV+SFGV++ EL+T RG P ++ D ++
Sbjct: 208 QTQKFTTKSDVWSFGVLLWELMT----------RGAP-----PYPDVNTFDITVYLLQGR 252
Query: 748 LSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVV 782
Q P +++ +C + E RP SE+V
Sbjct: 253 RLLQ-PEYCPDPLYEVMLKCWHPKAEMRPSFSELV 286
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 101/215 (46%), Gaps = 15/215 (6%)
Query: 509 NSFSQENLIGAGMLGSVYRA-QLPDGKLL----AVKKLDKRASSQQKDDEFLELVNNIDR 563
F + ++G+G G+VY+ +P+G+ + A+K+L + A+S + + E L+ +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMAS 73
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+ + ++ L G C +L I + G L D + E K+N+ + + A+
Sbjct: 74 VDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVR---EHKDNIGSQYLLNWCVQIAKG 129
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS-QLSGHLLTAYGY 682
+ YL + +VHR+ + N+ V ++D G A L+ + G +
Sbjct: 130 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 683 GAPEFESGIYTCQSDVYSFGVVMLELLT-GRKSYD 716
IYT QSDV+S+GV + EL+T G K YD
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 116/275 (42%), Gaps = 31/275 (11%)
Query: 516 LIGAGMLGSVYRAQL--PDGKLL--AVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+IG G G VY L DGK + AVK L+ R + + +FL + H N++
Sbjct: 42 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVLS 100
Query: 572 LKGYCAE-HGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
L G C G L++ Y +G L++ + ++ +N + I L A+ +++L
Sbjct: 101 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKFL--- 154
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSG---SVSQLSGHLLTAYGYGAPEF 687
VHR+ + N V V+D GLA + SV +G L
Sbjct: 155 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 214
Query: 688 ESGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPS 747
++ +T +SDV+SFGV++ EL+T RG P ++ D ++
Sbjct: 215 QTQKFTTKSDVWSFGVLLWELMT----------RGAP-----PYPDVNTFDITVYLLQGR 259
Query: 748 LSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVV 782
Q P +++ +C + E RP SE+V
Sbjct: 260 RLLQ-PEYCPDPLYEVMLKCWHPKAEMRPSFSELV 293
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 116/275 (42%), Gaps = 31/275 (11%)
Query: 516 LIGAGMLGSVYRAQL--PDGKLL--AVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+IG G G VY L DGK + AVK L+ R + + +FL + H N++
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 572 LKGYCAE-HGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
L G C G L++ Y +G L++ + ++ +N + I L A+ +++L
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKFL--- 149
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSG---SVSQLSGHLLTAYGYGAPEF 687
VHR+ + N V V+D GLA + SV +G L
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 209
Query: 688 ESGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPS 747
++ +T +SDV+SFGV++ EL+T RG P ++ D ++
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMT----------RGAP-----PYPDVNTFDITVYLLQGR 254
Query: 748 LSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVV 782
Q P +++ +C + E RP SE+V
Sbjct: 255 RLLQ-PEYCPDPLYEVMLKCWHPKAEMRPSFSELV 288
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 101/215 (46%), Gaps = 15/215 (6%)
Query: 509 NSFSQENLIGAGMLGSVYRA-QLPDGKLL----AVKKLDKRASSQQKDDEFLELVNNIDR 563
F + ++G+G G+VY+ +P+G+ + A+K+L + A+S + + E L+ +
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMAS 80
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+ + ++ L G C +L I + G L D + E K+N+ + + A+
Sbjct: 81 VDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVR---EHKDNIGSQYLLNWCVQIAKG 136
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS-QLSGHLLTAYGY 682
+ YL + +VHR+ + N+ V ++D G A L+ + G +
Sbjct: 137 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 683 GAPEFESGIYTCQSDVYSFGVVMLELLT-GRKSYD 716
IYT QSDV+S+GV + EL+T G K YD
Sbjct: 194 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 101/215 (46%), Gaps = 15/215 (6%)
Query: 509 NSFSQENLIGAGMLGSVYRA-QLPDGKLL----AVKKLDKRASSQQKDDEFLELVNNIDR 563
F + ++ +G G+VY+ +P+G+ + A+K+L + A+S + + E L+ +
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMAS 80
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+ + ++ L G C +L I + G L D + E K+N+ + + A+
Sbjct: 81 VDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVR---EHKDNIGSQYLLNWCVQIAKG 136
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS-QLSGHLLTAYGY 682
+ YL + +VHR+ + N+ V ++D GLA L+ + G +
Sbjct: 137 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 683 GAPEFESGIYTCQSDVYSFGVVMLELLT-GRKSYD 716
IYT QSDV+S+GV + EL+T G K YD
Sbjct: 194 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 120/295 (40%), Gaps = 41/295 (13%)
Query: 517 IGAGMLGSVYRAQL------PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G VY Q+ P +AVK L + S Q + D +E + I + H NIV
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI-ISKFNHQNIV 97
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHSD---DELKNNLSWNTRIRMALGAARALEYL 627
G + R ++ E + G L+ L ++L+ + +A A +YL
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 628 HEICQPPIVHRNFKSANIXXXXX---XAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGA 684
E +HR+ + N + D G+A I S + G + +
Sbjct: 158 EE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMP 214
Query: 685 PE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSR 742
PE F GI+T ++D +SFGV++ E+ + G Y N+ L + + R
Sbjct: 215 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE----------VLEFVTSGGR 264
Query: 743 MVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIRRERCSNE 797
M DP P I+++C Q +PE RP + +++ R E C+ +
Sbjct: 265 M-DP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILE------RIEYCTQD 306
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 113/297 (38%), Gaps = 41/297 (13%)
Query: 509 NSFSQENLIGAGMLGSVYRAQL-----PDGKL-LAVKKLDKRASSQQKDDEFLELVNNID 562
N S +GAG G V A D + +AVK L A +++ EL
Sbjct: 39 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 98
Query: 563 RIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLH--SDDELKNNLS----------- 609
H NIV L G C G L+I EYC G L + L D + + S
Sbjct: 99 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 158
Query: 610 -WNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGS 668
+ + A+ + +L +HR+ + NI + D GLA I + S
Sbjct: 159 DLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDS 215
Query: 669 VSQLSGHLLTAYGYGAPE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFL 726
+ G+ + APE + +YT +SDV+S+G+ + EL + G Y
Sbjct: 216 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY----------- 264
Query: 727 VRWAIPQLHDIDALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQ 783
P + +M+ P + + DI+ C ++P RP ++VQ
Sbjct: 265 -----PGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 316
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 101/215 (46%), Gaps = 15/215 (6%)
Query: 509 NSFSQENLIGAGMLGSVYRA-QLPDGKLL----AVKKLDKRASSQQKDDEFLELVNNIDR 563
F + ++ +G G+VY+ +P+G+ + A+K+L + A+S + + E L+ +
Sbjct: 15 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMAS 73
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+ + ++ L G C +L I + G L D + E K+N+ + + A+
Sbjct: 74 VDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVR---EHKDNIGSQYLLNWCVQIAKG 129
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS-QLSGHLLTAYGY 682
+ YL + +VHR+ + N+ V ++D GLA L+ + G +
Sbjct: 130 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 683 GAPEFESGIYTCQSDVYSFGVVMLELLT-GRKSYD 716
IYT QSDV+S+GV + EL+T G K YD
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 120/295 (40%), Gaps = 41/295 (13%)
Query: 517 IGAGMLGSVYRAQL------PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G VY Q+ P +AVK L + S Q + D +E + I + H NIV
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI-ISKFNHQNIV 111
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHSD---DELKNNLSWNTRIRMALGAARALEYL 627
G + R ++ E + G L+ L ++L+ + +A A +YL
Sbjct: 112 RCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 628 HEICQPPIVHRNFKSANIXXXXX---XAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGA 684
E +HR+ + N + D G+A I S + G + +
Sbjct: 172 EE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 228
Query: 685 PE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSR 742
PE F GI+T ++D +SFGV++ E+ + G Y N+ L + + R
Sbjct: 229 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE----------VLEFVTSGGR 278
Query: 743 MVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIRRERCSNE 797
M DP P I+++C Q +PE RP + +++ R E C+ +
Sbjct: 279 M-DP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILE------RIEYCTQD 320
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 116/275 (42%), Gaps = 31/275 (11%)
Query: 516 LIGAGMLGSVYRAQL--PDGKLL--AVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+IG G G VY L DGK + AVK L+ R + + +FL + H N++
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVLS 96
Query: 572 LKGYCAE-HGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
L G C G L++ Y +G L++ + ++ +N + I L A+ +++L
Sbjct: 97 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKFL--- 150
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSG---SVSQLSGHLLTAYGYGAPEF 687
VHR+ + N V V+D GLA + SV +G L
Sbjct: 151 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 210
Query: 688 ESGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPS 747
++ +T +SDV+SFGV++ EL+T RG P ++ D ++
Sbjct: 211 QTQKFTTKSDVWSFGVLLWELMT----------RGAP-----PYPDVNTFDITVYLLQGR 255
Query: 748 LSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVV 782
Q P +++ +C + E RP SE+V
Sbjct: 256 RLLQ-PEYCPDPLYEVMLKCWHPKAEMRPSFSELV 289
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 120/295 (40%), Gaps = 41/295 (13%)
Query: 517 IGAGMLGSVYRAQL------PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G VY Q+ P +AVK L + S Q + D +E + I + H NIV
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI-ISKFNHQNIV 96
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHSD---DELKNNLSWNTRIRMALGAARALEYL 627
G + R ++ E + G L+ L ++L+ + +A A +YL
Sbjct: 97 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 156
Query: 628 HEICQPPIVHRNFKSANIXXXXX---XAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGA 684
E +HR+ + N + D G+A I S + G + +
Sbjct: 157 EE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 213
Query: 685 PE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSR 742
PE F GI+T ++D +SFGV++ E+ + G Y N+ L + + R
Sbjct: 214 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE----------VLEFVTSGGR 263
Query: 743 MVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIRRERCSNE 797
M DP P I+++C Q +PE RP + +++ R E C+ +
Sbjct: 264 M-DP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILE------RIEYCTQD 305
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 120/295 (40%), Gaps = 41/295 (13%)
Query: 517 IGAGMLGSVYRAQL------PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G VY Q+ P +AVK L + S Q + D +E + I + H NIV
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI-ISKFNHQNIV 96
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHSD---DELKNNLSWNTRIRMALGAARALEYL 627
G + R ++ E + G L+ L ++L+ + +A A +YL
Sbjct: 97 RCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 156
Query: 628 HEICQPPIVHRNFKSANIXXXXX---XAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGA 684
E +HR+ + N + D G+A I S + G + +
Sbjct: 157 EE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 213
Query: 685 PE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSR 742
PE F GI+T ++D +SFGV++ E+ + G Y N+ L + + R
Sbjct: 214 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE----------VLEFVTSGGR 263
Query: 743 MVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIRRERCSNE 797
M DP P I+++C Q +PE RP + +++ R E C+ +
Sbjct: 264 M-DP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILE------RIEYCTQD 305
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 119/296 (40%), Gaps = 40/296 (13%)
Query: 511 FSQENLIGAGMLGSVYRAQLP--DGKLL--AVKKLDKRASSQQKDDEFLELVNNIDRIRH 566
F+ ++G G GSV AQL DG + AVK L + +EFL + H
Sbjct: 25 FTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDH 84
Query: 567 ANIVELKGYCAEHGQR------LLIYEYCSNGTLQDMLHSDDELKN--NLSWNTRIRMAL 618
++ +L G + ++I + +G L L + +N NL T +R +
Sbjct: 85 PHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMV 144
Query: 619 GAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSV-SQLSGHLL 677
A +EYL +HR+ + N V V+D GL+ I SG Q L
Sbjct: 145 DIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKL 201
Query: 678 TAYGYGAPEFESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHD 736
+YT SDV++FGV M E++T G+ Y N
Sbjct: 202 PVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIEN---------------- 245
Query: 737 IDALSRMVDPSLSG---QYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMI 789
+ + + + G + P + + D++ +C ++P+ RP + + +L +++
Sbjct: 246 ----AEIYNYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENIL 297
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 120/295 (40%), Gaps = 41/295 (13%)
Query: 517 IGAGMLGSVYRAQL------PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G VY Q+ P +AVK L + S Q + D +E + I + H NIV
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI-ISKFNHQNIV 88
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHSD---DELKNNLSWNTRIRMALGAARALEYL 627
G + R ++ E + G L+ L ++L+ + +A A +YL
Sbjct: 89 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 148
Query: 628 HEICQPPIVHRNFKSANIXXXXX---XAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGA 684
E +HR+ + N + D G+A I S + G + +
Sbjct: 149 EE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 205
Query: 685 PE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSR 742
PE F GI+T ++D +SFGV++ E+ + G Y N+ L + + R
Sbjct: 206 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE----------VLEFVTSGGR 255
Query: 743 MVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIRRERCSNE 797
M DP P I+++C Q +PE RP + +++ R E C+ +
Sbjct: 256 M-DP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILE------RIEYCTQD 297
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 101/215 (46%), Gaps = 15/215 (6%)
Query: 509 NSFSQENLIGAGMLGSVYRA-QLPDGKLL----AVKKLDKRASSQQKDDEFLELVNNIDR 563
F + ++G+G G+VY+ +P+G+ + A+K+L + A+S + + E L+ +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMAS 75
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+ + ++ L G C +L I + G L D + E K+N+ + + A+
Sbjct: 76 VDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVR---EHKDNIGSQYLLNWCVQIAKG 131
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS-QLSGHLLTAYGY 682
+ YL + +VHR+ + N+ V ++D G A L+ + G +
Sbjct: 132 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 683 GAPEFESGIYTCQSDVYSFGVVMLELLT-GRKSYD 716
IYT QSDV+S+GV + EL+T G K YD
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 119/273 (43%), Gaps = 31/273 (11%)
Query: 533 GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQR--LLIYEYCS 590
G+++AVK L Q + + + ++ + + H +I++ KG C + G++ L+ EY
Sbjct: 43 GEMVAVKALKADCGPQHRSG-WKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVP 101
Query: 591 NGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQ-------PPIVHRNFKSA 643
G+L+D L R ++G A+ L + +IC+ +HRN +
Sbjct: 102 LGSLRDYL---------------PRHSIGLAQLLLFAQQICEGMAYLHSQHYIHRNLAAR 146
Query: 644 NIXXXXXXAVSVSDCGLAPLISSG-SVSQLSGHLLTAYGYGAPE-FESGIYTCQSDVYSF 701
N+ V + D GLA + G ++ + + APE + + SDV+SF
Sbjct: 147 NVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSF 206
Query: 702 GVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLH-DIDALSRMVDPSLSGQYPAKSLSHF 760
GV + ELLT D +++ +FL I Q + L+ +++ P K
Sbjct: 207 GVTLYELLT---HCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEV 263
Query: 761 ADIISRCVQSEPEFRPPMSEVVQDLVDMIRRER 793
++ C ++E FRP ++ L + + R
Sbjct: 264 YHLMKNCWETEASFRPTFENLIPILKTVHEKYR 296
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 116/276 (42%), Gaps = 33/276 (11%)
Query: 516 LIGAGMLGSVYRAQL--PDGKLL--AVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+IG G G VY L DGK + AVK L+ R + + +FL + H N++
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVLS 96
Query: 572 LKGYCAE-HGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
L G C G L++ Y +G L++ + ++ +N + I L A+ +++L
Sbjct: 97 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKFL--- 150
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI---SSGSVSQLSGHLLTAYGYGAPEF 687
VHR+ + N V V+D GLA + SV +G L
Sbjct: 151 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESL 210
Query: 688 ESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDP 746
++ +T +SDV+SFGV++ EL+T G Y P ++ D ++
Sbjct: 211 QTQKFTTKSDVWSFGVLLWELMTRGAPPY----------------PDVNTFDITVYLLQG 254
Query: 747 SLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVV 782
Q P +++ +C + E RP SE+V
Sbjct: 255 RRLLQ-PEYCPDPLYEVMLKCWHPKAEMRPSFSELV 289
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 15/218 (6%)
Query: 499 FTIASLQQYTNSFSQENLIGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDE-FLE 556
F S +++ + + ++G G G V + G+ AVK + KR Q+ D E L
Sbjct: 39 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR 98
Query: 557 LVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRM 616
V + ++ H NI++L + + G L+ E + G L D + S + S R+
Sbjct: 99 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIIS----RKRFSEVDAARI 154
Query: 617 ALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXA---VSVSDCGLAPLISSGSVSQLS 673
+ Y+H + IVHR+ K N+ + + D GL+ + ++
Sbjct: 155 IRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK--KMK 209
Query: 674 GHLLTAYGYGAPEFESGIYTCQSDVYSFGVVMLELLTG 711
+ TAY Y APE G Y + DV+S GV++ LL+G
Sbjct: 210 DKIGTAY-YIAPEVLHGTYDEKCDVWSTGVILYILLSG 246
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 119/273 (43%), Gaps = 31/273 (11%)
Query: 533 GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQR--LLIYEYCS 590
G+++AVK L Q + + + ++ + + H +I++ KG C + G++ L+ EY
Sbjct: 43 GEMVAVKALKADCGPQHRSG-WKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVP 101
Query: 591 NGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQ-------PPIVHRNFKSA 643
G+L+D L R ++G A+ L + +IC+ +HRN +
Sbjct: 102 LGSLRDYL---------------PRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRNLAAR 146
Query: 644 NIXXXXXXAVSVSDCGLAPLISSG-SVSQLSGHLLTAYGYGAPE-FESGIYTCQSDVYSF 701
N+ V + D GLA + G ++ + + APE + + SDV+SF
Sbjct: 147 NVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSF 206
Query: 702 GVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLH-DIDALSRMVDPSLSGQYPAKSLSHF 760
GV + ELLT D +++ +FL I Q + L+ +++ P K
Sbjct: 207 GVTLYELLT---HCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEV 263
Query: 761 ADIISRCVQSEPEFRPPMSEVVQDLVDMIRRER 793
++ C ++E FRP ++ L + + R
Sbjct: 264 YHLMKNCWETEASFRPTFENLIPILKTVHEKYR 296
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 120/295 (40%), Gaps = 41/295 (13%)
Query: 517 IGAGMLGSVYRAQL------PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G VY Q+ P +AVK L + S Q + D +E + I + H NIV
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI-ISKFNHQNIV 103
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHSD---DELKNNLSWNTRIRMALGAARALEYL 627
G + R ++ E + G L+ L ++L+ + +A A +YL
Sbjct: 104 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 163
Query: 628 HEICQPPIVHRNFKSANIXXXXX---XAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGA 684
E +HR+ + N + D G+A I S + G + +
Sbjct: 164 EE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 220
Query: 685 PE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSR 742
PE F GI+T ++D +SFGV++ E+ + G Y N+ L + + R
Sbjct: 221 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE----------VLEFVTSGGR 270
Query: 743 MVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIRRERCSNE 797
M DP P I+++C Q +PE RP + +++ R E C+ +
Sbjct: 271 M-DP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILE------RIEYCTQD 312
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 113/297 (38%), Gaps = 41/297 (13%)
Query: 509 NSFSQENLIGAGMLGSVYRAQL-----PDGKL-LAVKKLDKRASSQQKDDEFLELVNNID 562
N S +GAG G V A D + +AVK L A +++ EL
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 563 RIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLH--SDDELKNNLS----------- 609
H NIV L G C G L+I EYC G L + L D + + S
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 165
Query: 610 -WNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGS 668
+ + A+ + +L +HR+ + NI + D GLA I + S
Sbjct: 166 DLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDS 222
Query: 669 VSQLSGHLLTAYGYGAPE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFL 726
+ G+ + APE + +YT +SDV+S+G+ + EL + G Y
Sbjct: 223 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY----------- 271
Query: 727 VRWAIPQLHDIDALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQ 783
P + +M+ P + + DI+ C ++P RP ++VQ
Sbjct: 272 -----PGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 323
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 127/279 (45%), Gaps = 42/279 (15%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
+G G G VY+AQ + +LA K+ S ++ +D +E ++ + H NIV+L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVE-IDILASCDHPNIVKLLDAF 103
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
++ E+C+ G + ++ EL+ L+ + + AL YLH+ I+
Sbjct: 104 YYENNLWILIEFCAGGAVDAVML---ELERPLTESQIQVVCKQTLDALNYLHD---NKII 157
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEF------ESG 690
HR+ K+ NI + ++D G++ ++ ++ + + T Y + APE +
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVSAK-NTRTIQRRDSFIGTPY-WMAPEVVMCETSKDR 215
Query: 691 IYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVD----- 745
Y ++DV+S G+ ++E+ P H+++ + ++
Sbjct: 216 PYDYKADVWSLGITLIEMAEIE-------------------PPHHELNPMRVLLKIAKSE 256
Query: 746 -PSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQ 783
P+L+ P++ S+F D + +C++ + R S+++Q
Sbjct: 257 PPTLAQ--PSRWSSNFKDFLKKCLEKNVDARWTTSQLLQ 293
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 15/218 (6%)
Query: 499 FTIASLQQYTNSFSQENLIGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDE-FLE 556
F S +++ + + ++G G G V + G+ AVK + KR Q+ D E L
Sbjct: 16 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR 75
Query: 557 LVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRM 616
V + ++ H NI++L + + G L+ E + G L D + S + S R+
Sbjct: 76 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIIS----RKRFSEVDAARI 131
Query: 617 ALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXA---VSVSDCGLAPLISSGSVSQLS 673
+ Y+H + IVHR+ K N+ + + D GL+ + ++
Sbjct: 132 IRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK--KMK 186
Query: 674 GHLLTAYGYGAPEFESGIYTCQSDVYSFGVVMLELLTG 711
+ TAY Y APE G Y + DV+S GV++ LL+G
Sbjct: 187 DKIGTAY-YIAPEVLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 15/218 (6%)
Query: 499 FTIASLQQYTNSFSQENLIGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDE-FLE 556
F S +++ + + ++G G G V + G+ AVK + KR Q+ D E L
Sbjct: 40 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR 99
Query: 557 LVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRM 616
V + ++ H NI++L + + G L+ E + G L D + S + S R+
Sbjct: 100 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIIS----RKRFSEVDAARI 155
Query: 617 ALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXA---VSVSDCGLAPLISSGSVSQLS 673
+ Y+H + IVHR+ K N+ + + D GL+ + ++
Sbjct: 156 IRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK--KMK 210
Query: 674 GHLLTAYGYGAPEFESGIYTCQSDVYSFGVVMLELLTG 711
+ TAY Y APE G Y + DV+S GV++ LL+G
Sbjct: 211 DKIGTAY-YIAPEVLHGTYDEKCDVWSTGVILYILLSG 247
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 116/276 (42%), Gaps = 33/276 (11%)
Query: 516 LIGAGMLGSVYRAQL--PDGKLL--AVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
+IG G G VY L DGK + AVK L+ R + + +FL + H N++
Sbjct: 96 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RITDIGEVSQFLTEGIIMKDFSHPNVLS 154
Query: 572 LKGYCAE-HGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
L G C G L++ Y +G L++ + ++ +N + I L A+ +++L
Sbjct: 155 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKFL--- 208
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSG---SVSQLSGHLLTAYGYGAPEF 687
VHR+ + N V V+D GLA + SV +G L
Sbjct: 209 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 268
Query: 688 ESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDP 746
++ +T +SDV+SFGV++ EL+T G Y P ++ D ++
Sbjct: 269 QTQKFTTKSDVWSFGVLLWELMTRGAPPY----------------PDVNTFDITVYLLQG 312
Query: 747 SLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVV 782
Q P +++ +C + E RP SE+V
Sbjct: 313 RRLLQ-PEYCPDPLYEVMLKCWHPKAEMRPSFSELV 347
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 127/295 (43%), Gaps = 44/295 (14%)
Query: 509 NSFSQENLIGAGMLGSVYRA-QLPDGKLLAVK---KLDKRASSQQKDDEFLELVNNIDRI 564
+ ++G+G G+VY+ +P+G+ + + K+ + + + EF++ + +
Sbjct: 38 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASM 97
Query: 565 RHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARAL 624
H ++V L G C +L + + +G L + +H E K+N+ + + A+ +
Sbjct: 98 DHPHLVRLLGVCLSPTIQL-VTQLMPHGCLLEYVH---EHKDNIGSQLLLNWCVQIAKGM 153
Query: 625 EYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI--------SSGSVSQLSGHL 676
YL E +VHR+ + N+ V ++D GLA L+ + G +
Sbjct: 154 MYLEE---RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMA 210
Query: 677 LTAYGYGAPEFESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLH 735
L Y +T QSDV+S+GV + EL+T G K YD R IP L
Sbjct: 211 LECIHYRK-------FTHQSDVWSYGVTIWELMTFGGKPYDGIPTR--------EIPDL- 254
Query: 736 DIDALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIR 790
++ R+ P P ++ + ++ +C + + RP E+ + M R
Sbjct: 255 -LEKGERLPQP------PICTIDVYM-VMVKCWMIDADSRPKFKELAAEFSRMAR 301
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 120/295 (40%), Gaps = 41/295 (13%)
Query: 517 IGAGMLGSVYRAQL------PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G VY Q+ P +AVK L + S Q + D +E + I + H NIV
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI-ISKFNHQNIV 113
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHSD---DELKNNLSWNTRIRMALGAARALEYL 627
G + R ++ E + G L+ L ++L+ + +A A +YL
Sbjct: 114 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 173
Query: 628 HEICQPPIVHRNFKSANIXXXXX---XAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGA 684
E +HR+ + N + D G+A I S + G + +
Sbjct: 174 EE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 230
Query: 685 PE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSR 742
PE F GI+T ++D +SFGV++ E+ + G Y N+ L + + R
Sbjct: 231 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE----------VLEFVTSGGR 280
Query: 743 MVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIRRERCSNE 797
M DP P I+++C Q +PE RP + +++ R E C+ +
Sbjct: 281 M-DP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILE------RIEYCTQD 322
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 126/289 (43%), Gaps = 44/289 (15%)
Query: 515 NLIGAGMLGSVYRA-QLPDGKLLAVK---KLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
++G+G G+VY+ +P+G+ + + K+ + + + EF++ + + H ++V
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
L G C +L + + +G L + +H E K+N+ + + A+ + YL E
Sbjct: 81 RLLGVCLSPTIQL-VTQLMPHGCLLEYVH---EHKDNIGSQLLLNWCVQIAKGMMYLEE- 135
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI--------SSGSVSQLSGHLLTAYGY 682
+VHR+ + N+ V ++D GLA L+ + G + L Y
Sbjct: 136 --RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHY 193
Query: 683 GAPEFESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALS 741
+T QSDV+S+GV + EL+T G K YD R IP L ++
Sbjct: 194 RK-------FTHQSDVWSYGVTIWELMTFGGKPYDGIPTR--------EIPDL--LEKGE 236
Query: 742 RMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIR 790
R+ P P ++ + ++ +C + + RP E+ + M R
Sbjct: 237 RLPQP------PICTIDVYM-VMVKCWMIDADSRPKFKELAAEFSRMAR 278
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 120/295 (40%), Gaps = 41/295 (13%)
Query: 517 IGAGMLGSVYRAQL------PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G VY Q+ P +AVK L + S Q + D +E + I + H NIV
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI-ISKFNHQNIV 97
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHSD---DELKNNLSWNTRIRMALGAARALEYL 627
G + R ++ E + G L+ L ++L+ + +A A +YL
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 628 HEICQPPIVHRNFKSANIXXXXX---XAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGA 684
E +HR+ + N + D G+A I S + G + +
Sbjct: 158 EE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 214
Query: 685 PE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSR 742
PE F GI+T ++D +SFGV++ E+ + G Y N+ L + + R
Sbjct: 215 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE----------VLEFVTSGGR 264
Query: 743 MVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIRRERCSNE 797
M DP P I+++C Q +PE RP + +++ R E C+ +
Sbjct: 265 M-DP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILE------RIEYCTQD 306
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 118/284 (41%), Gaps = 37/284 (13%)
Query: 517 IGAGMLGSVYRA-------QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
+G G G VY P+ ++ A+K +++ AS +++ EFL + + ++
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRV-AIKTVNEAASMRERI-EFLNEASVMKEFNCHHV 84
Query: 570 VELKGYCAEHGQRLLIYEYCSNGTLQDMLHS-DDELKNNL-----SWNTRIRMALGAARA 623
V L G ++ L+I E + G L+ L S E++NN S + I+MA A
Sbjct: 85 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 144
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYG 683
+ YL+ VHR+ + N V + D G+ I + G L +
Sbjct: 145 MAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 201
Query: 684 APE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALS 741
+PE + G++T SDV+SFGVV+ E+ T + Y N EQ L
Sbjct: 202 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN--EQVL--------------- 244
Query: 742 RMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDL 785
R V P +++ C Q P+ RP E++ +
Sbjct: 245 RFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 288
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 113/297 (38%), Gaps = 41/297 (13%)
Query: 509 NSFSQENLIGAGMLGSVYRAQL-----PDGKL-LAVKKLDKRASSQQKDDEFLELVNNID 562
N S +GAG G V A D + +AVK L A +++ EL
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82
Query: 563 RIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLH--SDDELKNNLS----------- 609
H NIV L G C G L+I EYC G L + L D + + S
Sbjct: 83 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 142
Query: 610 -WNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGS 668
+ + A+ + +L +HR+ + NI + D GLA I + S
Sbjct: 143 DLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDS 199
Query: 669 VSQLSGHLLTAYGYGAPE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFL 726
+ G+ + APE + +YT +SDV+S+G+ + EL + G Y
Sbjct: 200 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY----------- 248
Query: 727 VRWAIPQLHDIDALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQ 783
P + +M+ P + + DI+ C ++P RP ++VQ
Sbjct: 249 -----PGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 300
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 113/297 (38%), Gaps = 41/297 (13%)
Query: 509 NSFSQENLIGAGMLGSVYRAQL-----PDGKL-LAVKKLDKRASSQQKDDEFLELVNNID 562
N S +GAG G V A D + +AVK L A +++ EL
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 563 RIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLH--SDDELKNNLS----------- 609
H NIV L G C G L+I EYC G L + L D + + S
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 165
Query: 610 -WNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGS 668
+ + A+ + +L +HR+ + NI + D GLA I + S
Sbjct: 166 DLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDS 222
Query: 669 VSQLSGHLLTAYGYGAPE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFL 726
+ G+ + APE + +YT +SDV+S+G+ + EL + G Y
Sbjct: 223 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY----------- 271
Query: 727 VRWAIPQLHDIDALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQ 783
P + +M+ P + + DI+ C ++P RP ++VQ
Sbjct: 272 -----PGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 323
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 129/321 (40%), Gaps = 37/321 (11%)
Query: 480 GTAVKTSTKTAKPFTTARSFTIASLQQYTNSFSQENLIGAGMLGSVYRA-------QLPD 532
G V ++ + F+ A + + + +G G G VY P+
Sbjct: 18 GNGVLYASVNPEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPE 77
Query: 533 GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNG 592
++ A+K +++ AS +++ EFL + + ++V L G ++ L+I E + G
Sbjct: 78 TRV-AIKTVNEAASMRERI-EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 135
Query: 593 TLQDMLHS-DDELKNNL-----SWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIX 646
L+ L S E++NN S + I+MA A + YL+ VHR+ + N
Sbjct: 136 DLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCM 192
Query: 647 XXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FESGIYTCQSDVYSFGVVM 705
V + D G+ I + G L + +PE + G++T SDV+SFGVV+
Sbjct: 193 VAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 252
Query: 706 LELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSLSGQYPAKSLSHFADII 764
E+ T + Y N EQ L R V P +++
Sbjct: 253 WEIATLAEQPYQGLSN--EQVL---------------RFVMEGGLLDKPDNCPDMLFELM 295
Query: 765 SRCVQSEPEFRPPMSEVVQDL 785
C Q P+ RP E++ +
Sbjct: 296 RMCWQYNPKMRPSFLEIISSI 316
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 15/218 (6%)
Query: 499 FTIASLQQYTNSFSQENLIGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDE-FLE 556
F S +++ + + ++G G G V + G+ AVK + KR Q+ D E L
Sbjct: 22 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR 81
Query: 557 LVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRM 616
V + ++ H NI++L + + G L+ E + G L D + S + S R+
Sbjct: 82 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIIS----RKRFSEVDAARI 137
Query: 617 ALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXA---VSVSDCGLAPLISSGSVSQLS 673
+ Y+H + IVHR+ K N+ + + D GL+ + ++
Sbjct: 138 IRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK--KMK 192
Query: 674 GHLLTAYGYGAPEFESGIYTCQSDVYSFGVVMLELLTG 711
+ TAY Y APE G Y + DV+S GV++ LL+G
Sbjct: 193 DKIGTAY-YIAPEVLHGTYDEKCDVWSTGVILYILLSG 229
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 113/297 (38%), Gaps = 41/297 (13%)
Query: 509 NSFSQENLIGAGMLGSVYRAQL-----PDGKL-LAVKKLDKRASSQQKDDEFLELVNNID 562
N S +GAG G V A D + +AVK L A +++ EL
Sbjct: 41 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 100
Query: 563 RIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLH--SDDELKNNLS----------- 609
H NIV L G C G L+I EYC G L + L D + + S
Sbjct: 101 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 160
Query: 610 -WNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGS 668
+ + A+ + +L +HR+ + NI + D GLA I + S
Sbjct: 161 DLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDS 217
Query: 669 VSQLSGHLLTAYGYGAPE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFL 726
+ G+ + APE + +YT +SDV+S+G+ + EL + G Y
Sbjct: 218 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY----------- 266
Query: 727 VRWAIPQLHDIDALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQ 783
P + +M+ P + + DI+ C ++P RP ++VQ
Sbjct: 267 -----PGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 318
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 120/295 (40%), Gaps = 41/295 (13%)
Query: 517 IGAGMLGSVYRAQL------PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G VY Q+ P +AVK L + S Q + D +E + I + H NIV
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI-ISKFNHQNIV 123
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHSD---DELKNNLSWNTRIRMALGAARALEYL 627
G + R ++ E + G L+ L ++L+ + +A A +YL
Sbjct: 124 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 183
Query: 628 HEICQPPIVHRNFKSANIXXXXX---XAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGA 684
E +HR+ + N + D G+A I S + G + +
Sbjct: 184 EE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 240
Query: 685 PE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSR 742
PE F GI+T ++D +SFGV++ E+ + G Y N+ L + + R
Sbjct: 241 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE----------VLEFVTSGGR 290
Query: 743 MVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIRRERCSNE 797
M DP P I+++C Q +PE RP + +++ R E C+ +
Sbjct: 291 M-DP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILE------RIEYCTQD 332
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 120/295 (40%), Gaps = 41/295 (13%)
Query: 517 IGAGMLGSVYRAQL------PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G VY Q+ P +AVK L + S Q + D +E + I + H NIV
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALI-ISKFNHQNIV 111
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHSD---DELKNNLSWNTRIRMALGAARALEYL 627
G + R ++ E + G L+ L ++L+ + +A A +YL
Sbjct: 112 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 628 HEICQPPIVHRNFKSANIXXXXX---XAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGA 684
E +HR+ + N + D G+A I S + G + +
Sbjct: 172 EE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 228
Query: 685 PE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSR 742
PE F GI+T ++D +SFGV++ E+ + G Y N+ L + + R
Sbjct: 229 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE----------VLEFVTSGGR 278
Query: 743 MVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIRRERCSNE 797
M DP P I+++C Q +PE RP + +++ R E C+ +
Sbjct: 279 M-DP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILE------RIEYCTQD 320
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 27/215 (12%)
Query: 510 SFSQENLIGAGMLGSVYRAQLPD-GKLLAVKKL--DKRASSQQKDDEFLELVNNIDRIRH 566
S++ +IG G G VY+A+L D G+L+A+KK+ DKR +++ L+++ +D H
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE-----LQIMRKLD---H 108
Query: 567 ANIVELKGYCAEHGQRL------LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGA 620
NIV L+ + G++ L+ +Y + H + ++ M
Sbjct: 109 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQL 167
Query: 621 ARALEYLHEICQPPIVHRNFKSANIXXXXXXAV-SVSDCGLAPLISSGSVSQLSGHLLTA 679
R+L Y+H I HR+ K N+ AV + D G A + G + ++ +
Sbjct: 168 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSYICSR 222
Query: 680 YGYGAPE--FESGIYTCQSDVYSFGVVMLELLTGR 712
Y Y APE F + YT DV+S G V+ ELL G+
Sbjct: 223 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 27/215 (12%)
Query: 510 SFSQENLIGAGMLGSVYRAQLPD-GKLLAVKKL--DKRASSQQKDDEFLELVNNIDRIRH 566
S++ +IG G G VY+A+L D G+L+A+KK+ DKR +++ L+++ +D H
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE-----LQIMRKLD---H 106
Query: 567 ANIVELKGYCAEHGQRL------LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGA 620
NIV L+ + G++ L+ +Y + H + ++ M
Sbjct: 107 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQL 165
Query: 621 ARALEYLHEICQPPIVHRNFKSANIXXXXXXAV-SVSDCGLAPLISSGSVSQLSGHLLTA 679
R+L Y+H I HR+ K N+ AV + D G A + G + ++ +
Sbjct: 166 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSYICSR 220
Query: 680 YGYGAPE--FESGIYTCQSDVYSFGVVMLELLTGR 712
Y Y APE F + YT DV+S G V+ ELL G+
Sbjct: 221 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 103/219 (47%), Gaps = 21/219 (9%)
Query: 508 TNSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLEL---VNNIDR 563
++ + ++G G + V+ A+ L D + +AVK L RA + +L N
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVL--RADLARDPSFYLRFRREAQNAAA 68
Query: 564 IRHANIVEL--KGYCAEHGQRL--LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALG 619
+ H IV + G L ++ EY TL+D++H++ ++ I +
Sbjct: 69 LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIAD 124
Query: 620 AARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI--SSGSVSQLSGHLL 677
A +AL + H Q I+HR+ K ANI AV V D G+A I S SV+Q + +
Sbjct: 125 ACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 181
Query: 678 TAYGYGAPEFESG-IYTCQSDVYSFGVVMLELLTGRKSY 715
TA Y +PE G +SDVYS G V+ E+LTG +
Sbjct: 182 TAQ-YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 27/215 (12%)
Query: 510 SFSQENLIGAGMLGSVYRAQLPD-GKLLAVKKL--DKRASSQQKDDEFLELVNNIDRIRH 566
S++ +IG G G VY+A+L D G+L+A+KK+ DKR +++ L+++ +D H
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE-----LQIMRKLD---H 100
Query: 567 ANIVELKGYCAEHGQRL------LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGA 620
NIV L+ + G++ L+ +Y + H + ++ M
Sbjct: 101 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQL 159
Query: 621 ARALEYLHEICQPPIVHRNFKSANIXXXXXXAV-SVSDCGLAPLISSGSVSQLSGHLLTA 679
R+L Y+H I HR+ K N+ AV + D G A + G + ++ +
Sbjct: 160 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSYICSR 214
Query: 680 YGYGAPE--FESGIYTCQSDVYSFGVVMLELLTGR 712
Y Y APE F + YT DV+S G V+ ELL G+
Sbjct: 215 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 27/215 (12%)
Query: 510 SFSQENLIGAGMLGSVYRAQLPD-GKLLAVKKL--DKRASSQQKDDEFLELVNNIDRIRH 566
S++ +IG G G VY+A+L D G+L+A+KK+ DKR +++ L+++ +D H
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE-----LQIMRKLD---H 85
Query: 567 ANIVELKGYCAEHGQRL------LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGA 620
NIV L+ + G++ L+ +Y + H + ++ M
Sbjct: 86 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQL 144
Query: 621 ARALEYLHEICQPPIVHRNFKSANIXXXXXXAV-SVSDCGLAPLISSGSVSQLSGHLLTA 679
R+L Y+H I HR+ K N+ AV + D G A + G + ++ +
Sbjct: 145 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSYICSR 199
Query: 680 YGYGAPE--FESGIYTCQSDVYSFGVVMLELLTGR 712
Y Y APE F + YT DV+S G V+ ELL G+
Sbjct: 200 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 126/279 (45%), Gaps = 42/279 (15%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
+G G G VY+AQ + +LA K+ S ++ +D +E ++ + H NIV+L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVE-IDILASCDHPNIVKLLDAF 103
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
++ E+C+ G + ++ EL+ L+ + + AL YLH+ I+
Sbjct: 104 YYENNLWILIEFCAGGAVDAVML---ELERPLTESQIQVVCKQTLDALNYLHD---NKII 157
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEF------ESG 690
HR+ K+ NI + ++D G++ ++ + + + T Y + APE +
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVSAK-NTRXIQRRDSFIGTPY-WMAPEVVMCETSKDR 215
Query: 691 IYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVD----- 745
Y ++DV+S G+ ++E+ P H+++ + ++
Sbjct: 216 PYDYKADVWSLGITLIEMAEIE-------------------PPHHELNPMRVLLKIAKSE 256
Query: 746 -PSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQ 783
P+L+ P++ S+F D + +C++ + R S+++Q
Sbjct: 257 PPTLAQ--PSRWSSNFKDFLKKCLEKNVDARWTTSQLLQ 293
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 118/284 (41%), Gaps = 37/284 (13%)
Query: 517 IGAGMLGSVYRA-------QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
+G G G VY P+ ++ A+K +++ AS +++ EFL + + ++
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETRV-AIKTVNEAASMRERI-EFLNEASVMKEFNCHHV 81
Query: 570 VELKGYCAEHGQRLLIYEYCSNGTLQDMLHS-DDELKNNL-----SWNTRIRMALGAARA 623
V L G ++ L+I E + G L+ L S E++NN S + I+MA A
Sbjct: 82 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 141
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYG 683
+ YL+ VHR+ + N V + D G+ I + G L +
Sbjct: 142 MAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 198
Query: 684 APE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALS 741
+PE + G++T SDV+SFGVV+ E+ T + Y N EQ L
Sbjct: 199 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN--EQVL--------------- 241
Query: 742 RMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDL 785
R V P +++ C Q P+ RP E++ +
Sbjct: 242 RFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 285
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 27/215 (12%)
Query: 510 SFSQENLIGAGMLGSVYRAQLPD-GKLLAVKKL--DKRASSQQKDDEFLELVNNIDRIRH 566
S++ +IG G G VY+A+L D G+L+A+KK+ DKR +++ L+++ +D H
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE-----LQIMRKLD---H 110
Query: 567 ANIVELKGYCAEHGQRL------LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGA 620
NIV L+ + G++ L+ +Y + H + ++ M
Sbjct: 111 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQL 169
Query: 621 ARALEYLHEICQPPIVHRNFKSANIXXXXXXAV-SVSDCGLAPLISSGSVSQLSGHLLTA 679
R+L Y+H I HR+ K N+ AV + D G A + G + ++ +
Sbjct: 170 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSYICSR 224
Query: 680 YGYGAPE--FESGIYTCQSDVYSFGVVMLELLTGR 712
Y Y APE F + YT DV+S G V+ ELL G+
Sbjct: 225 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 95/221 (42%), Gaps = 31/221 (14%)
Query: 517 IGAGMLGSVYRAQLPD------GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
IG G G V++A+ P ++AVK L + AS+ + D F + + NIV
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQAD-FQREAALMAEFDNPNIV 113
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDML------------HSDDELKNN--------LSW 610
+L G CA L++EY + G L + L HSD + LS
Sbjct: 114 KLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSC 173
Query: 611 NTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS 670
++ +A A + YL E VHR+ + N V ++D GL+ I S
Sbjct: 174 AEQLCIARQVAAGMAYLSE---RKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYY 230
Query: 671 QLSGHLLTAYGYGAPE-FESGIYTCQSDVYSFGVVMLELLT 710
+ G+ + PE YT +SDV+++GVV+ E+ +
Sbjct: 231 KADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 103/219 (47%), Gaps = 21/219 (9%)
Query: 508 TNSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLEL---VNNIDR 563
++ + ++G G + V+ A+ L D + +AVK L RA + +L N
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVL--RADLARDPSFYLRFRREAQNAAA 68
Query: 564 IRHANIVEL--KGYCAEHGQRL--LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALG 619
+ H IV + G L ++ EY TL+D++H++ ++ I +
Sbjct: 69 LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIAD 124
Query: 620 AARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI--SSGSVSQLSGHLL 677
A +AL + H Q I+HR+ K ANI AV V D G+A I S SV+Q + +
Sbjct: 125 ACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 181
Query: 678 TAYGYGAPEFESG-IYTCQSDVYSFGVVMLELLTGRKSY 715
TA Y +PE G +SDVYS G V+ E+LTG +
Sbjct: 182 TAQ-YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 118/284 (41%), Gaps = 37/284 (13%)
Query: 517 IGAGMLGSVYRA-------QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
+G G G VY P+ ++ A+K +++ AS +++ EFL + + ++
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRV-AIKTVNEAASMRERI-EFLNEASVMKEFNCHHV 83
Query: 570 VELKGYCAEHGQRLLIYEYCSNGTLQDMLHS-DDELKNNL-----SWNTRIRMALGAARA 623
V L G ++ L+I E + G L+ L S E++NN S + I+MA A
Sbjct: 84 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 143
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYG 683
+ YL+ VHR+ + N V + D G+ I + G L +
Sbjct: 144 MAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 200
Query: 684 APE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALS 741
+PE + G++T SDV+SFGVV+ E+ T + Y N EQ L
Sbjct: 201 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN--EQVL--------------- 243
Query: 742 RMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDL 785
R V P +++ C Q P+ RP E++ +
Sbjct: 244 RFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 287
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 118/284 (41%), Gaps = 37/284 (13%)
Query: 517 IGAGMLGSVYRA-------QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
+G G G VY P+ ++ A+K +++ AS +++ EFL + + ++
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRV-AIKTVNEAASMRERI-EFLNEASVMKEFNCHHV 77
Query: 570 VELKGYCAEHGQRLLIYEYCSNGTLQDMLHS-DDELKNNL-----SWNTRIRMALGAARA 623
V L G ++ L+I E + G L+ L S E++NN S + I+MA A
Sbjct: 78 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 137
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYG 683
+ YL+ VHR+ + N V + D G+ I + G L +
Sbjct: 138 MAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 194
Query: 684 APE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALS 741
+PE + G++T SDV+SFGVV+ E+ T + Y N EQ L
Sbjct: 195 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN--EQVL--------------- 237
Query: 742 RMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDL 785
R V P +++ C Q P+ RP E++ +
Sbjct: 238 RFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 281
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 122/275 (44%), Gaps = 39/275 (14%)
Query: 520 GMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEH 579
G G VY+AQ + +LA K+ S ++ +D +E ++ + H NIV+L
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVE-IDILASCDHPNIVKLLDAFYYE 79
Query: 580 GQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRN 639
++ E+C+ G + ++ EL+ L+ + + AL YLH+ I+HR+
Sbjct: 80 NNLWILIEFCAGGAVDAVML---ELERPLTESQIQVVCKQTLDALNYLHD---NKIIHRD 133
Query: 640 FKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEF------ESGIYT 693
K+ NI + ++D G++ + + + + T Y + APE + Y
Sbjct: 134 LKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPY-WMAPEVVMCETSKDRPYD 192
Query: 694 CQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMV-----DPSL 748
++DV+S G+ ++E+ P H+++ + ++ +P
Sbjct: 193 YKADVWSLGITLIEMAEIE-------------------PPHHELNPMRVLLKIAKSEPPT 233
Query: 749 SGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQ 783
Q P++ S+F D + +C++ + R S+++Q
Sbjct: 234 LAQ-PSRWSSNFKDFLKKCLEKNVDARWTTSQLLQ 267
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 118/284 (41%), Gaps = 37/284 (13%)
Query: 517 IGAGMLGSVYRA-------QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
+G G G VY P+ ++ A+K +++ AS +++ EFL + + ++
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRV-AIKTVNEAASMRERI-EFLNEASVMKEFNCHHV 84
Query: 570 VELKGYCAEHGQRLLIYEYCSNGTLQDMLHS-DDELKNNL-----SWNTRIRMALGAARA 623
V L G ++ L+I E + G L+ L S E++NN S + I+MA A
Sbjct: 85 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 144
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYG 683
+ YL+ VHR+ + N V + D G+ I + G L +
Sbjct: 145 MAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 201
Query: 684 APE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALS 741
+PE + G++T SDV+SFGVV+ E+ T + Y N EQ L
Sbjct: 202 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN--EQVL--------------- 244
Query: 742 RMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDL 785
R V P +++ C Q P+ RP E++ +
Sbjct: 245 RFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 288
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 27/215 (12%)
Query: 510 SFSQENLIGAGMLGSVYRAQLPD-GKLLAVKKL--DKRASSQQKDDEFLELVNNIDRIRH 566
S++ +IG G G VY+A+L D G+L+A+KK+ DKR +++ L+++ +D H
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE-----LQIMRKLD---H 151
Query: 567 ANIVELKGYCAEHGQRL------LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGA 620
NIV L+ + G++ L+ +Y + H + ++ M
Sbjct: 152 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQL 210
Query: 621 ARALEYLHEICQPPIVHRNFKSANIXXXXXXAV-SVSDCGLAPLISSGSVSQLSGHLLTA 679
R+L Y+H I HR+ K N+ AV + D G A + G + ++ +
Sbjct: 211 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSYICSR 265
Query: 680 YGYGAPE--FESGIYTCQSDVYSFGVVMLELLTGR 712
Y Y APE F + YT DV+S G V+ ELL G+
Sbjct: 266 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 94/210 (44%), Gaps = 34/210 (16%)
Query: 520 GMLGSVYRAQLPDGKLLAVKKL---DKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
G G V++AQL + + +AVK DK++ + + V ++ ++H NI++ G
Sbjct: 35 GRFGCVWKAQLLN-EYVAVKIFPIQDKQSWQNEYE------VYSLPGMKHENILQFIG-A 86
Query: 577 AEHGQRL-----LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEIC 631
+ G + LI + G+L D L + N +SWN +A AR L YLHE
Sbjct: 87 EKRGTSVDVDLWLITAFHEKGSLSDFLKA-----NVVSWNELCHIAETMARGLAYLHEDI 141
Query: 632 -------QPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGA 684
+P I HR+ KS N+ ++D GLA +G + + + Y A
Sbjct: 142 PGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMA 201
Query: 685 PEFESGIYTCQS------DVYSFGVVMLEL 708
PE G Q D+Y+ G+V+ EL
Sbjct: 202 PEVLEGAINFQRDAFLRIDMYAMGLVLWEL 231
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 119/284 (41%), Gaps = 37/284 (13%)
Query: 517 IGAGMLGSVYRA-------QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
+G G G VY P+ ++ A+K +++ AS +++ EFL + + ++
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRV-AIKTVNEAASMRERI-EFLNEASVMKEFNCHHV 77
Query: 570 VELKGYCAEHGQRLLIYEYCSNGTLQDMLHS-DDELKNNL-----SWNTRIRMALGAARA 623
V L G ++ L+I E + G L+ L S E++NN S + I+MA A
Sbjct: 78 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 137
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYG 683
+ YL+ VHR+ + N V + D G+ I + G L +
Sbjct: 138 MAYLN---ANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 194
Query: 684 APE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALS 741
+PE + G++T SDV+SFGVV+ E+ T + Y N EQ L
Sbjct: 195 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN--EQVL--------------- 237
Query: 742 RMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDL 785
R V P +++ C Q P+ RP E++ +
Sbjct: 238 RFVMEGGLLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEIISSI 281
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 126/279 (45%), Gaps = 42/279 (15%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
+G G G VY+AQ + +LA K+ S ++ +D +E ++ + H NIV+L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVE-IDILASCDHPNIVKLLDAF 103
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
++ E+C+ G + ++ EL+ L+ + + AL YLH+ I+
Sbjct: 104 YYENNLWILIEFCAGGAVDAVML---ELERPLTESQIQVVCKQTLDALNYLHD---NKII 157
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEF------ESG 690
HR+ K+ NI + ++D G++ ++ + + + T Y + APE +
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVSAK-NTRXIQRRDXFIGTPY-WMAPEVVMCETSKDR 215
Query: 691 IYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVD----- 745
Y ++DV+S G+ ++E+ P H+++ + ++
Sbjct: 216 PYDYKADVWSLGITLIEMAEIE-------------------PPHHELNPMRVLLKIAKSE 256
Query: 746 -PSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQ 783
P+L+ P++ S+F D + +C++ + R S+++Q
Sbjct: 257 PPTLAQ--PSRWSSNFKDFLKKCLEKNVDARWTTSQLLQ 293
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 118/284 (41%), Gaps = 37/284 (13%)
Query: 517 IGAGMLGSVYRA-------QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
+G G G VY P+ ++ A+K +++ AS +++ EFL + + ++
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRV-AIKTVNEAASMRERI-EFLNEASVMKEFNCHHV 90
Query: 570 VELKGYCAEHGQRLLIYEYCSNGTLQDMLHS-DDELKNNL-----SWNTRIRMALGAARA 623
V L G ++ L+I E + G L+ L S E++NN S + I+MA A
Sbjct: 91 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 150
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYG 683
+ YL+ VHR+ + N V + D G+ I + G L +
Sbjct: 151 MAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 207
Query: 684 APE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALS 741
+PE + G++T SDV+SFGVV+ E+ T + Y N EQ L
Sbjct: 208 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN--EQVL--------------- 250
Query: 742 RMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDL 785
R V P +++ C Q P+ RP E++ +
Sbjct: 251 RFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 294
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 27/215 (12%)
Query: 510 SFSQENLIGAGMLGSVYRAQLPD-GKLLAVKKL--DKRASSQQKDDEFLELVNNIDRIRH 566
S++ +IG G G VY+A+L D G+L+A+KK+ DKR +++ L+++ +D H
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE-----LQIMRKLD---H 77
Query: 567 ANIVELKGYCAEHGQRL------LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGA 620
NIV L+ + G++ L+ +Y + H + ++ M
Sbjct: 78 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQL 136
Query: 621 ARALEYLHEICQPPIVHRNFKSANIXXXXXXAV-SVSDCGLAPLISSGSVSQLSGHLLTA 679
R+L Y+H I HR+ K N+ AV + D G A + G + ++ +
Sbjct: 137 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSYICSR 191
Query: 680 YGYGAPE--FESGIYTCQSDVYSFGVVMLELLTGR 712
Y Y APE F + YT DV+S G V+ ELL G+
Sbjct: 192 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 27/215 (12%)
Query: 510 SFSQENLIGAGMLGSVYRAQLPD-GKLLAVKKL--DKRASSQQKDDEFLELVNNIDRIRH 566
S++ +IG G G VY+A+L D G+L+A+KK+ DKR +++ L+++ +D H
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE-----LQIMRKLD---H 72
Query: 567 ANIVELKGYCAEHGQRL------LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGA 620
NIV L+ + G++ L+ +Y + H + ++ M
Sbjct: 73 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQL 131
Query: 621 ARALEYLHEICQPPIVHRNFKSANIXXXXXXAV-SVSDCGLAPLISSGSVSQLSGHLLTA 679
R+L Y+H I HR+ K N+ AV + D G A + G + ++ +
Sbjct: 132 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSYICSR 186
Query: 680 YGYGAPE--FESGIYTCQSDVYSFGVVMLELLTGR 712
Y Y APE F + YT DV+S G V+ ELL G+
Sbjct: 187 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 118/284 (41%), Gaps = 37/284 (13%)
Query: 517 IGAGMLGSVYRA-------QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
+G G G VY P+ ++ A+K +++ AS +++ EFL + + ++
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRV-AIKTVNEAASMRERI-EFLNEASVMKEFNCHHV 83
Query: 570 VELKGYCAEHGQRLLIYEYCSNGTLQDMLHS-DDELKNNL-----SWNTRIRMALGAARA 623
V L G ++ L+I E + G L+ L S E++NN S + I+MA A
Sbjct: 84 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 143
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYG 683
+ YL+ VHR+ + N V + D G+ I + G L +
Sbjct: 144 MAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 200
Query: 684 APE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALS 741
+PE + G++T SDV+SFGVV+ E+ T + Y N EQ L
Sbjct: 201 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN--EQVL--------------- 243
Query: 742 RMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDL 785
R V P +++ C Q P+ RP E++ +
Sbjct: 244 RFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 287
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 133/291 (45%), Gaps = 41/291 (14%)
Query: 501 IASLQQYTNSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVN 559
I S+ +++ IG G G+VY A + G+ +A+++++ + QQ E + +N
Sbjct: 13 IVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQ---QQPKKELI--IN 67
Query: 560 NIDRIR---HANIVE-LKGYCAEHGQRL-LIYEYCSNGTLQDMLHSDDELKNNLSWNTRI 614
I +R + NIV L Y G L ++ EY + G+L D++ + ++ R
Sbjct: 68 EILVMRENKNPNIVNYLDSYLV--GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR- 124
Query: 615 RMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSG 674
+ALE+LH ++HRN KS NI +V ++D G I+ S+ S
Sbjct: 125 ----ECLQALEFLH---SNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQ-SKRST 176
Query: 675 HLLTAYGYGAPEFES-GIYTCQSDVYSFGVVMLELLTGRKSY-DRTRNRGEQFLVRWAIP 732
+ T Y + APE + Y + D++S G++ +E++ G Y + R + P
Sbjct: 177 MVGTPY-WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTP 235
Query: 733 QLHDIDALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQ 783
+L + + LS + F D ++RC++ + E R E++Q
Sbjct: 236 ELQNPEKLSAI----------------FRDFLNRCLEMDVEKRGSAKELIQ 270
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 31/217 (14%)
Query: 510 SFSQENLIGAGMLGSVYRAQLPD-GKLLAVKKL--DKRASSQQKDDEFLELVNNIDRIRH 566
S++ +IG G G VY+A+L D G+L+A+KK+ DKR +++ L+++ +D H
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE-----LQIMRKLD---H 106
Query: 567 ANIVELKGYCAEHGQRL------LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGA 620
NIV L+ + G++ L+ +Y + H + ++ M
Sbjct: 107 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQL 165
Query: 621 ARALEYLHEICQPPIVHRNFKSANIXXXXXXAV-SVSDCGLAPLISSG--SVSQLSGHLL 677
R+L Y+H I HR+ K N+ AV + D G A + G +VS +
Sbjct: 166 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY- 221
Query: 678 TAYGYGAPE--FESGIYTCQSDVYSFGVVMLELLTGR 712
Y APE F + YT DV+S G V+ ELL G+
Sbjct: 222 ----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 102/213 (47%), Gaps = 17/213 (7%)
Query: 505 QQYTNSFSQENLIGAGMLGSVYRAQL-PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDR 563
+ Y ++F + IG G G V A + GKL+AVKK+D R Q+++ F E+V D
Sbjct: 150 RSYLDNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLR-KQQRRELLFNEVVIMRD- 204
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+H N+VE+ + ++ E+ G L D++ ++ + L +A
Sbjct: 205 YQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV-----THTRMNEEQIAAVCLAVLQA 259
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYG 683
L LH ++HR+ KS +I V +SD G +S V + + T Y +
Sbjct: 260 LSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK-EVPRRKXLVGTPY-WM 314
Query: 684 APEFESGI-YTCQSDVYSFGVVMLELLTGRKSY 715
APE S + Y + D++S G++++E++ G Y
Sbjct: 315 APELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 347
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 70/135 (51%), Gaps = 11/135 (8%)
Query: 584 LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSA 643
++ EY TL+D++H++ ++ I + A +AL + H Q I+HR+ K A
Sbjct: 93 IVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPA 145
Query: 644 NIXXXXXXAVSVSDCGLAPLI--SSGSVSQLSGHLLTAYGYGAPEFESG-IYTCQSDVYS 700
NI AV V D G+A I S SV+Q + + TA Y +PE G +SDVYS
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ-YLSPEQARGDSVDARSDVYS 204
Query: 701 FGVVMLELLTGRKSY 715
G V+ E+LTG +
Sbjct: 205 LGCVLYEVLTGEPPF 219
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 31/217 (14%)
Query: 510 SFSQENLIGAGMLGSVYRAQLPD-GKLLAVKKL--DKRASSQQKDDEFLELVNNIDRIRH 566
S++ +IG G G VY+A+L D G+L+A+KK+ DKR +++ L+++ +D H
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE-----LQIMRKLD---H 91
Query: 567 ANIVELKGYCAEHGQRL------LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGA 620
NIV L+ + G++ L+ +Y + H + ++ M
Sbjct: 92 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQL 150
Query: 621 ARALEYLHEICQPPIVHRNFKSANIXXXXXXAV-SVSDCGLAPLISSG--SVSQLSGHLL 677
R+L Y+H I HR+ K N+ AV + D G A + G +VS +
Sbjct: 151 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY- 206
Query: 678 TAYGYGAPE--FESGIYTCQSDVYSFGVVMLELLTGR 712
Y APE F + YT DV+S G V+ ELL G+
Sbjct: 207 ----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 31/217 (14%)
Query: 510 SFSQENLIGAGMLGSVYRAQLPD-GKLLAVKKL--DKRASSQQKDDEFLELVNNIDRIRH 566
S++ +IG G G VY+A+L D G+L+A+KK+ DKR +++ L+++ +D H
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE-----LQIMRKLD---H 80
Query: 567 ANIVELKGYCAEHGQRL------LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGA 620
NIV L+ + G++ L+ +Y + H + ++ M
Sbjct: 81 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQL 139
Query: 621 ARALEYLHEICQPPIVHRNFKSANIXXXXXXAV-SVSDCGLAPLISSG--SVSQLSGHLL 677
R+L Y+H I HR+ K N+ AV + D G A + G +VS +
Sbjct: 140 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY- 195
Query: 678 TAYGYGAPE--FESGIYTCQSDVYSFGVVMLELLTGR 712
Y APE F + YT DV+S G V+ ELL G+
Sbjct: 196 ----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 70/135 (51%), Gaps = 11/135 (8%)
Query: 584 LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSA 643
++ EY TL+D++H++ ++ I + A +AL + H Q I+HR+ K A
Sbjct: 93 IVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPA 145
Query: 644 NIXXXXXXAVSVSDCGLAPLI--SSGSVSQLSGHLLTAYGYGAPEFESG-IYTCQSDVYS 700
NI AV V D G+A I S SV+Q + + TA Y +PE G +SDVYS
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ-YLSPEQARGDSVDARSDVYS 204
Query: 701 FGVVMLELLTGRKSY 715
G V+ E+LTG +
Sbjct: 205 LGCVLYEVLTGEPPF 219
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 119/295 (40%), Gaps = 41/295 (13%)
Query: 517 IGAGMLGSVYRAQL------PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G VY Q+ P +AVK L + S Q + D +E + I + H NIV
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI-ISKFNHQNIV 137
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHSD---DELKNNLSWNTRIRMALGAARALEYL 627
G + R ++ E + G L+ L ++L+ + +A A +YL
Sbjct: 138 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 197
Query: 628 HEICQPPIVHRNFKSANIXXXXX---XAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGA 684
E +HR+ + N + D G+A I + G + +
Sbjct: 198 EE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMP 254
Query: 685 PE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSR 742
PE F GI+T ++D +SFGV++ E+ + G Y N+ L + + R
Sbjct: 255 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE----------VLEFVTSGGR 304
Query: 743 MVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIRRERCSNE 797
M DP P I+++C Q +PE RP + +++ R E C+ +
Sbjct: 305 M-DP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILE------RIEYCTQD 346
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 97/212 (45%), Gaps = 13/212 (6%)
Query: 504 LQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDR 563
Q + + +G G G VY+A+ G+++A+K++ A + + ++ +
Sbjct: 16 FQGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKE 75
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMAL-GAAR 622
+ H NIV L L++E+ +D+ DE K L +++I++ L R
Sbjct: 76 LHHPNIVSLIDVIHSERCLTLVFEFME----KDLKKVLDENKTGLQ-DSQIKIYLYQLLR 130
Query: 623 ALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGY 682
+ + H Q I+HR+ K N+ A+ ++D GLA + G + H + Y
Sbjct: 131 GVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLAR--AFGIPVRSYTHEVVTLWY 185
Query: 683 GAPEFESG--IYTCQSDVYSFGVVMLELLTGR 712
AP+ G Y+ D++S G + E++TG+
Sbjct: 186 RAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 31/217 (14%)
Query: 510 SFSQENLIGAGMLGSVYRAQLPD-GKLLAVKKL--DKRASSQQKDDEFLELVNNIDRIRH 566
S++ +IG G G VY+A+L D G+L+A+KK+ DKR +++ L+++ +D H
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE-----LQIMRKLD---H 84
Query: 567 ANIVELKGYCAEHGQRL------LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGA 620
NIV L+ + G++ L+ +Y + H + ++ M
Sbjct: 85 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQL 143
Query: 621 ARALEYLHEICQPPIVHRNFKSANIXXXXXXAV-SVSDCGLAPLISSG--SVSQLSGHLL 677
R+L Y+H I HR+ K N+ AV + D G A + G +VS +
Sbjct: 144 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY- 199
Query: 678 TAYGYGAPE--FESGIYTCQSDVYSFGVVMLELLTGR 712
Y APE F + YT DV+S G V+ ELL G+
Sbjct: 200 ----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 97/212 (45%), Gaps = 13/212 (6%)
Query: 504 LQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDR 563
Q + + +G G G VY+A+ G+++A+K++ A + + ++ +
Sbjct: 16 FQGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKE 75
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMAL-GAAR 622
+ H NIV L L++E+ +D+ DE K L +++I++ L R
Sbjct: 76 LHHPNIVSLIDVIHSERCLTLVFEFME----KDLKKVLDENKTGLQ-DSQIKIYLYQLLR 130
Query: 623 ALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGY 682
+ + H Q I+HR+ K N+ A+ ++D GLA + G + H + Y
Sbjct: 131 GVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLAR--AFGIPVRSYTHEVVTLWY 185
Query: 683 GAPEFESG--IYTCQSDVYSFGVVMLELLTGR 712
AP+ G Y+ D++S G + E++TG+
Sbjct: 186 RAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 31/217 (14%)
Query: 510 SFSQENLIGAGMLGSVYRAQLPD-GKLLAVKKL--DKRASSQQKDDEFLELVNNIDRIRH 566
S++ +IG G G VY+A+L D G+L+A+KK+ DKR +++ L+++ +D H
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE-----LQIMRKLD---H 84
Query: 567 ANIVELKGYCAEHGQRL------LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGA 620
NIV L+ + G++ L+ +Y + H + ++ M
Sbjct: 85 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQL 143
Query: 621 ARALEYLHEICQPPIVHRNFKSANIXXXXXXAV-SVSDCGLAPLISSG--SVSQLSGHLL 677
R+L Y+H I HR+ K N+ AV + D G A + G +VS +
Sbjct: 144 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY- 199
Query: 678 TAYGYGAPE--FESGIYTCQSDVYSFGVVMLELLTGR 712
Y APE F + YT DV+S G V+ ELL G+
Sbjct: 200 ----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 102/219 (46%), Gaps = 21/219 (9%)
Query: 508 TNSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLEL---VNNIDR 563
++ + ++G G + V+ A+ L D + +AVK L RA + +L N
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVL--RADLARDPSFYLRFRREAQNAAA 68
Query: 564 IRHANIVEL--KGYCAEHGQRL--LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALG 619
+ H IV + G L ++ EY TL+D++H++ ++ I +
Sbjct: 69 LNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIAD 124
Query: 620 AARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI--SSGSVSQLSGHLL 677
A +AL + H Q I+HR+ K ANI AV V D G+A I S SV Q + +
Sbjct: 125 ACQALNFSH---QNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIG 181
Query: 678 TAYGYGAPEFESG-IYTCQSDVYSFGVVMLELLTGRKSY 715
TA Y +PE G +SDVYS G V+ E+LTG +
Sbjct: 182 TAQ-YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 119/295 (40%), Gaps = 41/295 (13%)
Query: 517 IGAGMLGSVYRAQL------PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G VY Q+ P +AVK L + S Q + D +E + I + H NIV
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI-ISKFNHQNIV 114
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHSD---DELKNNLSWNTRIRMALGAARALEYL 627
G + R ++ E + G L+ L ++L+ + +A A +YL
Sbjct: 115 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 174
Query: 628 HEICQPPIVHRNFKSANIXXXXX---XAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGA 684
E +HR+ + N + D G+A I + G + +
Sbjct: 175 EE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMP 231
Query: 685 PE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSR 742
PE F GI+T ++D +SFGV++ E+ + G Y N+ L + + R
Sbjct: 232 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE----------VLEFVTSGGR 281
Query: 743 MVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIRRERCSNE 797
M DP P I+++C Q +PE RP + +++ R E C+ +
Sbjct: 282 M-DP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILE------RIEYCTQD 323
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 70/135 (51%), Gaps = 11/135 (8%)
Query: 584 LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSA 643
++ EY TL+D++H++ ++ I + A +AL + H Q I+HR+ K A
Sbjct: 110 IVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPA 162
Query: 644 NIXXXXXXAVSVSDCGLAPLI--SSGSVSQLSGHLLTAYGYGAPEFESG-IYTCQSDVYS 700
NI AV V D G+A I S SV+Q + + TA Y +PE G +SDVYS
Sbjct: 163 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ-YLSPEQARGDSVDARSDVYS 221
Query: 701 FGVVMLELLTGRKSY 715
G V+ E+LTG +
Sbjct: 222 LGCVLYEVLTGEPPF 236
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 31/217 (14%)
Query: 510 SFSQENLIGAGMLGSVYRAQLPD-GKLLAVKKL--DKRASSQQKDDEFLELVNNIDRIRH 566
S++ +IG G G VY+A+L D G+L+A+KK+ DKR +++ L+++ +D H
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE-----LQIMRKLD---H 72
Query: 567 ANIVELKGYCAEHGQRL------LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGA 620
NIV L+ + G++ L+ +Y + H + ++ M
Sbjct: 73 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQL 131
Query: 621 ARALEYLHEICQPPIVHRNFKSANIXXXXXXAV-SVSDCGLAPLISSG--SVSQLSGHLL 677
R+L Y+H I HR+ K N+ AV + D G A + G +VS +
Sbjct: 132 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY- 187
Query: 678 TAYGYGAPE--FESGIYTCQSDVYSFGVVMLELLTGR 712
Y APE F + YT DV+S G V+ ELL G+
Sbjct: 188 ----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 31/217 (14%)
Query: 510 SFSQENLIGAGMLGSVYRAQLPD-GKLLAVKKL--DKRASSQQKDDEFLELVNNIDRIRH 566
S++ +IG G G VY+A+L D G+L+A+KK+ DKR +++ L+++ +D H
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE-----LQIMRKLD---H 72
Query: 567 ANIVELKGYCAEHGQRL------LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGA 620
NIV L+ + G++ L+ +Y + H + ++ M
Sbjct: 73 CNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQL 131
Query: 621 ARALEYLHEICQPPIVHRNFKSANIXXXXXXAV-SVSDCGLAPLISSG--SVSQLSGHLL 677
R+L Y+H I HR+ K N+ AV + D G A + G +VS +
Sbjct: 132 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY- 187
Query: 678 TAYGYGAPE--FESGIYTCQSDVYSFGVVMLELLTGR 712
Y APE F + YT DV+S G V+ ELL G+
Sbjct: 188 ----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 31/217 (14%)
Query: 510 SFSQENLIGAGMLGSVYRAQLPD-GKLLAVKKL--DKRASSQQKDDEFLELVNNIDRIRH 566
S++ +IG G G VY+A+L D G+L+A+KK+ DKR +++ L+++ +D H
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE-----LQIMRKLD---H 76
Query: 567 ANIVELKGYCAEHGQRL------LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGA 620
NIV L+ + G++ L+ +Y + H + ++ M
Sbjct: 77 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQL 135
Query: 621 ARALEYLHEICQPPIVHRNFKSANIXXXXXXAV-SVSDCGLAPLISSG--SVSQLSGHLL 677
R+L Y+H I HR+ K N+ AV + D G A + G +VS +
Sbjct: 136 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY- 191
Query: 678 TAYGYGAPE--FESGIYTCQSDVYSFGVVMLELLTGR 712
Y APE F + YT DV+S G V+ ELL G+
Sbjct: 192 ----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 31/217 (14%)
Query: 510 SFSQENLIGAGMLGSVYRAQLPD-GKLLAVKKL--DKRASSQQKDDEFLELVNNIDRIRH 566
S++ +IG G G VY+A+L D G+L+A+KK+ DKR +++ L+++ +D H
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE-----LQIMRKLD---H 72
Query: 567 ANIVELKGYCAEHGQRL------LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGA 620
NIV L+ + G++ L+ +Y + H + ++ M
Sbjct: 73 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQL 131
Query: 621 ARALEYLHEICQPPIVHRNFKSANIXXXXXXAV-SVSDCGLAPLISSG--SVSQLSGHLL 677
R+L Y+H I HR+ K N+ AV + D G A + G +VS +
Sbjct: 132 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY- 187
Query: 678 TAYGYGAPE--FESGIYTCQSDVYSFGVVMLELLTGR 712
Y APE F + YT DV+S G V+ ELL G+
Sbjct: 188 ----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 31/217 (14%)
Query: 510 SFSQENLIGAGMLGSVYRAQLPD-GKLLAVKKL--DKRASSQQKDDEFLELVNNIDRIRH 566
S++ +IG G G VY+A+L D G+L+A+KK+ DKR +++ L+++ +D H
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE-----LQIMRKLD---H 73
Query: 567 ANIVELKGYCAEHGQRL------LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGA 620
NIV L+ + G++ L+ +Y + H + ++ M
Sbjct: 74 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQL 132
Query: 621 ARALEYLHEICQPPIVHRNFKSANIXXXXXXAV-SVSDCGLAPLISSG--SVSQLSGHLL 677
R+L Y+H I HR+ K N+ AV + D G A + G +VS +
Sbjct: 133 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY- 188
Query: 678 TAYGYGAPE--FESGIYTCQSDVYSFGVVMLELLTGR 712
Y APE F + YT DV+S G V+ ELL G+
Sbjct: 189 ----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 114/274 (41%), Gaps = 40/274 (14%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQK--DDEFLELVNNIDRIRHANIVELKG 574
+G G G+VY A+ + K + K+ +A ++ + + V +RH NI+ L G
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 575 YCAEHGQRLLIYEYCSNGT----LQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
Y + + LI EY GT LQ + D++ ++ T + A AL Y H
Sbjct: 76 YFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQ--RTATYITEL------ANALSYCH-- 125
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG 690
++HR+ K N+ + ++D G + S + L G L Y PE G
Sbjct: 126 -SKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTL----DYLPPEMIEG 180
Query: 691 -IYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSLS 749
++ + D++S GV+ E L G+ ++ + D R+ +
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ----------------DTYKRISRVEFT 224
Query: 750 GQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQ 783
+P D+ISR ++ P RP + EV++
Sbjct: 225 --FPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 100/230 (43%), Gaps = 33/230 (14%)
Query: 506 QYTNSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKL---DKRASSQQKDDEFLELVNNI 561
+Y + F + ++G G G V +A+ D + A+KK+ +++ S+ + L +N+
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQ 62
Query: 562 DRIRHA-------NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRI 614
+R+ N V+ + + EYC NGTL D++HS++ N +
Sbjct: 63 YVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENL---NQQRDEYW 119
Query: 615 RMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISS-------- 666
R+ AL Y+H I+HR+ K NI V + D GLA +
Sbjct: 120 RLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLD 176
Query: 667 -----GSVSQLSGHLLTAYGYGAPEFESGI--YTCQSDVYSFGVVMLELL 709
GS L+ + TA Y A E G Y + D+YS G++ E++
Sbjct: 177 SQNLPGSSDNLTSAIGTAM-YVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 103/213 (48%), Gaps = 17/213 (7%)
Query: 505 QQYTNSFSQENLIGAGMLGSVYRAQL-PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDR 563
+ Y ++F + IG G G V A + GKL+AVKK+D R Q+++ F E+V D
Sbjct: 73 RSYLDNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLR-KQQRRELLFNEVVIMRD- 127
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+H N+VE+ + ++ E+ G L D++ + ++ + L +A
Sbjct: 128 YQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQA 182
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYG 683
L LH ++HR+ KS +I V +SD G +S V + + T Y +
Sbjct: 183 LSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK-EVPRRKXLVGTPY-WM 237
Query: 684 APEFESGI-YTCQSDVYSFGVVMLELLTGRKSY 715
APE S + Y + D++S G++++E++ G Y
Sbjct: 238 APELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 270
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 95/218 (43%), Gaps = 33/218 (15%)
Query: 520 GMLGSVYRAQLPDGKLLAVK--KLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCA 577
G G V++AQL + +AVK L + S Q + + F + ++H N+++
Sbjct: 26 GRFGCVWKAQLMN-DFVAVKIFPLQDKQSWQSEREIF-----STPGMKHENLLQFIA-AE 78
Query: 578 EHGQRL-----LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE--- 629
+ G L LI + G+L D L N ++WN +A +R L YLHE
Sbjct: 79 KRGSNLEVELWLITAFHDKGSLTDYLKG-----NIITWNELCHVAETMSRGLSYLHEDVP 133
Query: 630 IC-----QPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGA 684
C +P I HR+FKS N+ ++D GLA G + + Y A
Sbjct: 134 WCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMA 193
Query: 685 PEFESGIYTCQS------DVYSFGVVMLELLTGRKSYD 716
PE G Q D+Y+ G+V+ EL++ K+ D
Sbjct: 194 PEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 103/213 (48%), Gaps = 17/213 (7%)
Query: 505 QQYTNSFSQENLIGAGMLGSVYRAQL-PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDR 563
+ Y ++F + IG G G V A + GKL+AVKK+D R Q+++ F E+V D
Sbjct: 28 RSYLDNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLR-KQQRRELLFNEVVIMRD- 82
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+H N+VE+ + ++ E+ G L D++ + ++ + L +A
Sbjct: 83 YQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQA 137
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYG 683
L LH ++HR+ KS +I V +SD G +S V + + T Y +
Sbjct: 138 LSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK-EVPRRKXLVGTPY-WM 192
Query: 684 APEFESGI-YTCQSDVYSFGVVMLELLTGRKSY 715
APE S + Y + D++S G++++E++ G Y
Sbjct: 193 APELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 225
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 112/285 (39%), Gaps = 28/285 (9%)
Query: 517 IGAGMLGSVYRAQL--PDGKLLAVK-KLDKRASSQQKDDEFLELVNNIDRIRHANIVELK 573
IG G G V++ P+ LAV K K +S ++FL+ + + H +IV+L
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
G E+ +I E C+ G L+ L K +L + I A + AL YL
Sbjct: 75 GVITENPV-WIIMELCTLGELRSFLQVR---KYSLDLASLILYAYQLSTALAYLE---SK 127
Query: 634 PIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESGIYT 693
VHR+ + N+ V + D GL+ + + + S L +T
Sbjct: 128 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 187
Query: 694 CQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSLSGQY 752
SDV+ FGV M E+L G K + +N D + R ++
Sbjct: 188 SASDVWMFGVCMWEILMHGVKPFQGVKNN----------------DVIGR-IENGERLPM 230
Query: 753 PAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIRRERCSNE 797
P ++++C +P RP +E+ L ++ E+ E
Sbjct: 231 PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEKAQQE 275
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 103/213 (48%), Gaps = 17/213 (7%)
Query: 505 QQYTNSFSQENLIGAGMLGSVYRAQL-PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDR 563
+ Y ++F + IG G G V A + GKL+AVKK+D R Q+++ F E+V D
Sbjct: 30 RSYLDNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLR-KQQRRELLFNEVVIMRD- 84
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+H N+VE+ + ++ E+ G L D++ + ++ + L +A
Sbjct: 85 YQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQA 139
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYG 683
L LH ++HR+ KS +I V +SD G +S V + + T Y +
Sbjct: 140 LSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK-EVPRRKXLVGTPY-WM 194
Query: 684 APEFESGI-YTCQSDVYSFGVVMLELLTGRKSY 715
APE S + Y + D++S G++++E++ G Y
Sbjct: 195 APELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 227
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 112/285 (39%), Gaps = 28/285 (9%)
Query: 517 IGAGMLGSVYRAQL--PDGKLLAVK-KLDKRASSQQKDDEFLELVNNIDRIRHANIVELK 573
IG G G V++ P+ LAV K K +S ++FL+ + + H +IV+L
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
G E+ +I E C+ G L+ L K +L + I A + AL YL
Sbjct: 81 GVITENPV-WIIMELCTLGELRSFLQVR---KYSLDLASLILYAYQLSTALAYLE---SK 133
Query: 634 PIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESGIYT 693
VHR+ + N+ V + D GL+ + + + S L +T
Sbjct: 134 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 193
Query: 694 CQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSLSGQY 752
SDV+ FGV M E+L G K + +N D + R ++
Sbjct: 194 SASDVWMFGVCMWEILMHGVKPFQGVKNN----------------DVIGR-IENGERLPM 236
Query: 753 PAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIRRERCSNE 797
P ++++C +P RP +E+ L ++ E+ E
Sbjct: 237 PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEKAQQE 281
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 100/213 (46%), Gaps = 17/213 (7%)
Query: 505 QQYTNSFSQENLIGAGMLGSVYRAQL-PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDR 563
+ Y ++F + IG G G V A + GKL+AVKK+D R QQ+ + V +
Sbjct: 19 RSYLDNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLR--KQQRRELLFNEVVIMRD 73
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+H N+VE+ + ++ E+ G L D++ + ++ + L +A
Sbjct: 74 YQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQA 128
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYG 683
L LH ++HR+ KS +I V +SD G +S V + + T Y +
Sbjct: 129 LSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK-EVPRRKXLVGTPY-WM 183
Query: 684 APEFESGI-YTCQSDVYSFGVVMLELLTGRKSY 715
APE S + Y + D++S G++++E++ G Y
Sbjct: 184 APELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 216
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 134/292 (45%), Gaps = 41/292 (14%)
Query: 500 TIASLQQYTNSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELV 558
+I S+ +++ IG G G+VY A + G+ +A+++++ + QQ E + +
Sbjct: 12 SIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQ---QQPKKELI--I 66
Query: 559 NNIDRIR---HANIVE-LKGYCAEHGQRL-LIYEYCSNGTLQDMLHSDDELKNNLSWNTR 613
N I +R + NIV L Y G L ++ EY + G+L D++ + ++ R
Sbjct: 67 NEILVMRENKNPNIVNYLDSYLV--GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR 124
Query: 614 IRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLS 673
+ALE+LH ++HR+ KS NI +V ++D G I+ S+ S
Sbjct: 125 -----ECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-SKRS 175
Query: 674 GHLLTAYGYGAPEFES-GIYTCQSDVYSFGVVMLELLTGRKSY-DRTRNRGEQFLVRWAI 731
+ T Y + APE + Y + D++S G++ +E++ G Y + R +
Sbjct: 176 XMVGTPY-WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT 234
Query: 732 PQLHDIDALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQ 783
P+L + + LS + F D ++RC++ + E R E++Q
Sbjct: 235 PELQNPEKLSAI----------------FRDFLNRCLEMDVEKRGSAKELIQ 270
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 115/262 (43%), Gaps = 31/262 (11%)
Query: 533 GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQR--LLIYEYCS 590
G+++AVK L A Q + + + ++ + + H +I++ KG C + G L+ EY
Sbjct: 60 GEMVAVKALKADAGPQHRSG-WKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVP 118
Query: 591 NGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQ-------PPIVHRNFKSA 643
G+L+D L R ++G A+ L + +IC+ +HR+ +
Sbjct: 119 LGSLRDYL---------------PRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAAR 163
Query: 644 NIXXXXXXAVSVSDCGLAPLISSG-SVSQLSGHLLTAYGYGAPE-FESGIYTCQSDVYSF 701
N+ V + D GLA + G ++ + + APE + + SDV+SF
Sbjct: 164 NVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSF 223
Query: 702 GVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLH-DIDALSRMVDPSLSGQYPAKSLSHF 760
GV + ELLT D +++ +FL I Q + L+ +++ P K +
Sbjct: 224 GVTLYELLT---HCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEV 280
Query: 761 ADIISRCVQSEPEFRPPMSEVV 782
++ C ++E FRP ++
Sbjct: 281 YHLMKNCWETEASFRPTFENLI 302
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 112/285 (39%), Gaps = 28/285 (9%)
Query: 517 IGAGMLGSVYRAQL--PDGKLLAVK-KLDKRASSQQKDDEFLELVNNIDRIRHANIVELK 573
IG G G V++ P+ LAV K K +S ++FL+ + + H +IV+L
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
G E+ +I E C+ G L+ L K +L + I A + AL YL
Sbjct: 80 GVITENPV-WIIMELCTLGELRSFLQVR---KYSLDLASLILYAYQLSTALAYLE---SK 132
Query: 634 PIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESGIYT 693
VHR+ + N+ V + D GL+ + + + S L +T
Sbjct: 133 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 192
Query: 694 CQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSLSGQY 752
SDV+ FGV M E+L G K + +N D + R ++
Sbjct: 193 SASDVWMFGVCMWEILMHGVKPFQGVKNN----------------DVIGR-IENGERLPM 235
Query: 753 PAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIRRERCSNE 797
P ++++C +P RP +E+ L ++ E+ E
Sbjct: 236 PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEKAQQE 280
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 22/206 (10%)
Query: 517 IGAGMLGSVYRAQL-PDG----KLLAVKKLDKRASSQQKDD--EFLELVNNIDRIRHANI 569
+G G G V + P+G + +AVK L + D + +E++ N+ H NI
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNL---YHENI 85
Query: 570 VELKGYCAEHGQR--LLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
V+ KG C E G LI E+ +G+L++ L + KN ++ +++ A+ + ++YL
Sbjct: 86 VKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKN---KNKINLKQQLKYAVQICKGMDYL 142
Query: 628 HEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGS-VSQLSGHLLTAYGYGAPE 686
VHR+ + N+ V + D GL I + + + + APE
Sbjct: 143 G---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPE 199
Query: 687 --FESGIYTCQSDVYSFGVVMLELLT 710
+S Y SDV+SFGV + ELLT
Sbjct: 200 CLMQSKFYIA-SDVWSFGVTLHELLT 224
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 101/222 (45%), Gaps = 26/222 (11%)
Query: 505 QQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRI 564
+Q +++ +IG G G V++A+L + +A+KK+ + + ++ + + +V
Sbjct: 36 EQREIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNRELQIMRIV------ 89
Query: 565 RHANIVELKGYCAEHGQRL------LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMAL 618
+H N+V+LK + +G + L+ EY + H +LK +
Sbjct: 90 KHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHY-AKLKQTMPMLLIKLYMY 148
Query: 619 GAARALEYLHEICQPPIVHRNFKSANIXXXXXXAV-SVSDCGLAPLISSG--SVSQLSGH 675
R+L Y+H I I HR+ K N+ V + D G A ++ +G +VS +
Sbjct: 149 QLLRSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSR 205
Query: 676 LLTAYGYGAPE--FESGIYTCQSDVYSFGVVMLELLTGRKSY 715
Y APE F + YT D++S G VM EL+ G+ +
Sbjct: 206 Y-----YRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLF 242
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 115/279 (41%), Gaps = 50/279 (17%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQK--DDEFLELVNNIDRIRHANIVELKG 574
+G G G+VY A+ K + K+ +A ++ + + V +RH NI+ L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 575 YCAEHGQRLLIYEYCSNGT----LQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
Y + + LI EY GT LQ + D++ ++ T + A AL Y H
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ--RTATYITEL------ANALSYCH-- 126
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEF-ES 689
++HR+ K N+ + ++D G + S + LSG L Y PE E
Sbjct: 127 -SKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLSGTL----DYLPPEMIEG 181
Query: 690 GIYTCQSDVYSFGVVMLELLTGR-----KSYDRTRNRGEQFLVRWAIPQLHDIDALSRMV 744
++ + D++S GV+ E L G+ +Y T R +SR+
Sbjct: 182 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR------------------ISRV- 222
Query: 745 DPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQ 783
+P D+ISR ++ P RP + EV++
Sbjct: 223 ----EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 257
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 100/213 (46%), Gaps = 17/213 (7%)
Query: 505 QQYTNSFSQENLIGAGMLGSVYRAQL-PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDR 563
+ Y ++F + IG G G V A + GKL+AVKK+D R QQ+ + V +
Sbjct: 23 RSYLDNFIK---IGEGSTGIVCIATVRSSGKLVAVKKMDLR--KQQRRELLFNEVVIMRD 77
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+H N+VE+ + ++ E+ G L D++ + ++ + L +A
Sbjct: 78 YQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQA 132
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYG 683
L LH ++HR+ KS +I V +SD G +S V + + T Y +
Sbjct: 133 LSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK-EVPRRKXLVGTPY-WM 187
Query: 684 APEFESGI-YTCQSDVYSFGVVMLELLTGRKSY 715
APE S + Y + D++S G++++E++ G Y
Sbjct: 188 APELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 220
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 103/241 (42%), Gaps = 26/241 (10%)
Query: 511 FSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRI----R 565
F NL+G G VYRA+ + G +A+K +DK+A + ++ V N +I +
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAG---MVQRVQNEVKIHCQLK 69
Query: 566 HANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNL---SWNTRIRMALGAAR 622
H +I+EL Y + L+ E C NG + + LKN + S N
Sbjct: 70 HPSILELYNYFEDSNYVYLVLEMCHNGEM------NRYLKNRVKPFSENEARHFMHQIIT 123
Query: 623 ALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGY 682
+ YLH I+HR+ +N+ + ++D GLA + + L Y
Sbjct: 124 GMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPNY 178
Query: 683 GAPEFES-GIYTCQSDVYSFGVVMLELLTGRKSYDRTRNR---GEQFLVRWAIPQLHDID 738
+PE + + +SDV+S G + LL GR +D + + L + +P I+
Sbjct: 179 ISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSIE 238
Query: 739 A 739
A
Sbjct: 239 A 239
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 136/301 (45%), Gaps = 42/301 (13%)
Query: 511 FSQENL-----IGAGMLGSVYR-AQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRI 564
F+ E+L IG G GSV + P G+++AVK++ R++ +K+ + +L+ ++D +
Sbjct: 19 FTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRI--RSTVDEKEQK--QLLMDLDVV 74
Query: 565 RHAN----IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGA 620
++ IV+ G G + E S + + L + + ++ L
Sbjct: 75 MRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLAT 134
Query: 621 ARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA-PLISSGSVSQLSGHLLTA 679
+AL +L E + I+HR+ K +NI + + D G++ L+ S + ++ +G
Sbjct: 135 VKALNHLKENLK--IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAG----C 188
Query: 680 YGYGAPE-----FESGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQF--LVRWAIP 732
Y APE Y +SDV+S G+ + EL TGR Y + + +Q +V+ P
Sbjct: 189 RPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPP 248
Query: 733 QLHDIDALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIRRE 792
QL + + R PS F + ++ C+ + RP E+++ ++ E
Sbjct: 249 QLSNSE--EREFSPS------------FINFVNLCLTKDESKRPKYKELLKHPFILMYEE 294
Query: 793 R 793
R
Sbjct: 295 R 295
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 101/213 (47%), Gaps = 23/213 (10%)
Query: 510 SFSQENLIGAGMLGSVYRAQLPD-GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
S++ +IG G G VY+A+L D G+L+A+KK+ + + + ++ L+++ +D H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRE---LQIMRKLD---HCN 74
Query: 569 IVELKGYCAEHGQRL------LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAAR 622
IV L+ + G++ L+ +Y + H + ++ M R
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFR 133
Query: 623 ALEYLHEICQPPIVHRNFKSANIXXXXXXAV-SVSDCGLAPLISSGSVSQLSGHLLTAYG 681
+L Y+H I HR+ K N+ AV + D G A + G + ++ + Y
Sbjct: 134 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSYICSRY- 187
Query: 682 YGAPE--FESGIYTCQSDVYSFGVVMLELLTGR 712
Y APE F + YT DV+S G V+ ELL G+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 101/213 (47%), Gaps = 23/213 (10%)
Query: 510 SFSQENLIGAGMLGSVYRAQLPD-GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
S++ +IG G G VY+A+L D G+L+A+KK+ + + + ++ L+++ +D H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRE---LQIMRKLD---HCN 74
Query: 569 IVELKGYCAEHGQRL------LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAAR 622
IV L+ + G++ L+ +Y + H + ++ M R
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFR 133
Query: 623 ALEYLHEICQPPIVHRNFKSANIXXXXXXAV-SVSDCGLAPLISSGSVSQLSGHLLTAYG 681
+L Y+H I HR+ K N+ AV + D G A + G + ++ + Y
Sbjct: 134 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSYICSRY- 187
Query: 682 YGAPE--FESGIYTCQSDVYSFGVVMLELLTGR 712
Y APE F + YT DV+S G V+ ELL G+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 115/279 (41%), Gaps = 50/279 (17%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQK--DDEFLELVNNIDRIRHANIVELKG 574
+G G G+VY A+ K + K+ +A ++ + + V +RH NI+ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 575 YCAEHGQRLLIYEYCSNGT----LQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
Y + + LI EY GT LQ + D++ ++ T + A AL Y H
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ--RTATYITEL------ANALSYCH-- 125
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEF-ES 689
++HR+ K N+ + ++D G + S ++L G L Y PE E
Sbjct: 126 -SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELCGTL----DYLPPEMIEG 180
Query: 690 GIYTCQSDVYSFGVVMLELLTGR-----KSYDRTRNRGEQFLVRWAIPQLHDIDALSRMV 744
++ + D++S GV+ E L G+ +Y T R +SR+
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR------------------ISRV- 221
Query: 745 DPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQ 783
+P D+ISR ++ P RP + EV++
Sbjct: 222 ----EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 22/206 (10%)
Query: 517 IGAGMLGSVYRAQL-PDG----KLLAVKKLDKRASSQQKDD--EFLELVNNIDRIRHANI 569
+G G G V + P+G + +AVK L + D + +E++ N+ H NI
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNL---YHENI 73
Query: 570 VELKGYCAEHGQR--LLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
V+ KG C E G LI E+ +G+L++ L + KN ++ +++ A+ + ++YL
Sbjct: 74 VKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKN---KNKINLKQQLKYAVQICKGMDYL 130
Query: 628 HEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGS-VSQLSGHLLTAYGYGAPE 686
VHR+ + N+ V + D GL I + + + + APE
Sbjct: 131 G---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPE 187
Query: 687 --FESGIYTCQSDVYSFGVVMLELLT 710
+S Y SDV+SFGV + ELLT
Sbjct: 188 CLMQSKFYIA-SDVWSFGVTLHELLT 212
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 95/218 (43%), Gaps = 15/218 (6%)
Query: 499 FTIASLQQYTNSFSQENLIGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDE-FLE 556
F S +++ + + ++G G G V + G+ AVK + KR Q+ D E L
Sbjct: 16 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR 75
Query: 557 LVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRM 616
V + ++ H NI +L + + G L+ E + G L D + S + S R+
Sbjct: 76 EVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIIS----RKRFSEVDAARI 131
Query: 617 ALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXA---VSVSDCGLAPLISSGSVSQLS 673
+ Y H + IVHR+ K N+ + + D GL+ + +
Sbjct: 132 IRQVLSGITYXH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK--KXK 186
Query: 674 GHLLTAYGYGAPEFESGIYTCQSDVYSFGVVMLELLTG 711
+ TAY Y APE G Y + DV+S GV++ LL+G
Sbjct: 187 DKIGTAY-YIAPEVLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 134/292 (45%), Gaps = 41/292 (14%)
Query: 500 TIASLQQYTNSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELV 558
+I S+ +++ IG G G+VY A + G+ +A+++++ + QQ E + +
Sbjct: 11 SIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQ---QQPKKELI--I 65
Query: 559 NNIDRIR---HANIVE-LKGYCAEHGQRL-LIYEYCSNGTLQDMLHSDDELKNNLSWNTR 613
N I +R + NIV L Y G L ++ EY + G+L D++ + ++ R
Sbjct: 66 NEILVMRENKNPNIVNYLDSYLV--GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR 123
Query: 614 IRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLS 673
+ALE+LH ++HR+ KS NI +V ++D G I+ S+ S
Sbjct: 124 -----ECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-SKRS 174
Query: 674 GHLLTAYGYGAPEFES-GIYTCQSDVYSFGVVMLELLTGRKSY-DRTRNRGEQFLVRWAI 731
+ T Y + APE + Y + D++S G++ +E++ G Y + R +
Sbjct: 175 XMVGTPY-WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT 233
Query: 732 PQLHDIDALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQ 783
P+L + + LS + F D ++RC++ + E R E++Q
Sbjct: 234 PELQNPEKLSAI----------------FRDFLNRCLEMDVEKRGSAKELLQ 269
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 99/223 (44%), Gaps = 15/223 (6%)
Query: 498 SFTIASLQQYTNSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLE 556
S T A Q + ++ IG G V A+ + GK +AVK +DK + +
Sbjct: 3 SATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR 62
Query: 557 LVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRM 616
V + + H NIV+L L+ EY S G + D L + +K + + R
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA-RAKFRQ 121
Query: 617 ALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGS-VSQLSGH 675
+ A++Y H Q IVHR+ K+ N+ + ++D G + + G+ + G
Sbjct: 122 IVS---AVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCG- 174
Query: 676 LLTAYGYGAPE-FESGIYTC-QSDVYSFGVVMLELLTGRKSYD 716
A Y APE F+ Y + DV+S GV++ L++G +D
Sbjct: 175 ---APPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 111/281 (39%), Gaps = 28/281 (9%)
Query: 517 IGAGMLGSVYRAQL--PDGKLLAVK-KLDKRASSQQKDDEFLELVNNIDRIRHANIVELK 573
IG G G V++ P+ LAV K K +S ++FL+ + + H +IV+L
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
G E+ +I E C+ G L+ L K +L + I A + AL YL
Sbjct: 106 GVITENPV-WIIMELCTLGELRSFLQVR---KYSLDLASLILYAYQLSTALAYLE---SK 158
Query: 634 PIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESGIYT 693
VHR+ + N+ V + D GL+ + + + S L +T
Sbjct: 159 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 218
Query: 694 CQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSLSGQY 752
SDV+ FGV M E+L G K + +N D + R ++
Sbjct: 219 SASDVWMFGVCMWEILMHGVKPFQGVKNN----------------DVIGR-IENGERLPM 261
Query: 753 PAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIRRER 793
P ++++C +P RP +E+ L ++ E+
Sbjct: 262 PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEK 302
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 114/279 (40%), Gaps = 50/279 (17%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQK--DDEFLELVNNIDRIRHANIVELKG 574
+G G G+VY A+ K + K+ +A ++ + + V +RH NI+ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 575 YCAEHGQRLLIYEYCSNGT----LQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
Y + + LI EY GT LQ + D++ ++ T + A AL Y H
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ--RTATYITEL------ANALSYCH-- 125
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEF-ES 689
++HR+ K N+ + ++D G + S + L G L Y PE E
Sbjct: 126 -SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTL----DYLPPEMIEG 180
Query: 690 GIYTCQSDVYSFGVVMLELLTGR-----KSYDRTRNRGEQFLVRWAIPQLHDIDALSRMV 744
++ + D++S GV+ E L G+ +Y T R +SR+
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR------------------ISRV- 221
Query: 745 DPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQ 783
+P D+ISR ++ P RP + EV++
Sbjct: 222 ----EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 97/218 (44%), Gaps = 19/218 (8%)
Query: 505 QQYTNSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDR 563
Q + ++ IG G V A+ + G+ +A+K +DK + + V +
Sbjct: 8 QPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKI 67
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+ H NIV+L LI EY S G + D L + +K + ++ R + A
Sbjct: 68 LNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEA-RSKFRQIVS---A 123
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYG-- 681
++Y H Q IVHR+ K+ N+ + ++D G + + G G L T G
Sbjct: 124 VQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG------GKLDTFCGSP 174
Query: 682 -YGAPE-FESGIYTC-QSDVYSFGVVMLELLTGRKSYD 716
Y APE F+ Y + DV+S GV++ L++G +D
Sbjct: 175 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 114/279 (40%), Gaps = 50/279 (17%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQK--DDEFLELVNNIDRIRHANIVELKG 574
+G G G+VY A+ K + K+ +A ++ + + V +RH NI+ L G
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 575 YCAEHGQRLLIYEYCSNGT----LQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
Y + + LI EY GT LQ + D++ ++ T + A AL Y H
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ--RTATYITEL------ANALSYCH-- 129
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEF-ES 689
++HR+ K N+ + ++D G + S + L G L Y PE E
Sbjct: 130 -SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL----DYLPPEMIEG 184
Query: 690 GIYTCQSDVYSFGVVMLELLTGR-----KSYDRTRNRGEQFLVRWAIPQLHDIDALSRMV 744
++ + D++S GV+ E L G+ +Y T R +SR+
Sbjct: 185 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR------------------ISRV- 225
Query: 745 DPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQ 783
+P D+ISR ++ P RP + EV++
Sbjct: 226 ----EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 260
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 116/284 (40%), Gaps = 37/284 (13%)
Query: 517 IGAGMLGSVYRA-------QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
+G G G VY P+ ++ A+K +++ AS +++ EFL + + ++
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRV-AIKTVNEAASMRERI-EFLNEASVMKEFNCHHV 80
Query: 570 VELKGYCAEHGQRLLIYEYCSNGTLQDMLHS-DDELKNNL-----SWNTRIRMALGAARA 623
V L G ++ L+I E + G L+ L S + NN S + I+MA A
Sbjct: 81 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADG 140
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYG 683
+ YL+ VHR+ + N V + D G+ I + G L +
Sbjct: 141 MAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 197
Query: 684 APE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALS 741
+PE + G++T SDV+SFGVV+ E+ T + Y N EQ L
Sbjct: 198 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN--EQVL--------------- 240
Query: 742 RMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDL 785
R V P +++ C Q P+ RP E++ +
Sbjct: 241 RFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 284
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 114/279 (40%), Gaps = 50/279 (17%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQK--DDEFLELVNNIDRIRHANIVELKG 574
+G G G+VY A+ K + K+ +A ++ + + V +RH NI+ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 575 YCAEHGQRLLIYEYCSNGT----LQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
Y + + LI EY GT LQ + D++ ++ T + A AL Y H
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ--RTATYITEL------ANALSYCH-- 125
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEF-ES 689
++HR+ K N+ + ++D G + S + L G L Y PE E
Sbjct: 126 -SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLCGTL----DYLPPEMIEG 180
Query: 690 GIYTCQSDVYSFGVVMLELLTGR-----KSYDRTRNRGEQFLVRWAIPQLHDIDALSRMV 744
++ + D++S GV+ E L G+ +Y T R +SR+
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR------------------ISRV- 221
Query: 745 DPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQ 783
+P D+ISR ++ P RP + EV++
Sbjct: 222 ----EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 111/281 (39%), Gaps = 28/281 (9%)
Query: 517 IGAGMLGSVYRAQL--PDGKLLAVK-KLDKRASSQQKDDEFLELVNNIDRIRHANIVELK 573
IG G G V++ P+ LAV K K +S ++FL+ + + H +IV+L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
G E+ +I E C+ G L+ L K +L + I A + AL YL
Sbjct: 78 GVITENPV-WIIMELCTLGELRSFLQVR---KYSLDLASLILYAYQLSTALAYLE---SK 130
Query: 634 PIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESGIYT 693
VHR+ + N+ V + D GL+ + + + S L +T
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 190
Query: 694 CQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSLSGQY 752
SDV+ FGV M E+L G K + +N D + R ++
Sbjct: 191 SASDVWMFGVCMWEILMHGVKPFQGVKNN----------------DVIGR-IENGERLPM 233
Query: 753 PAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIRRER 793
P ++++C +P RP +E+ L ++ E+
Sbjct: 234 PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEK 274
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 111/281 (39%), Gaps = 28/281 (9%)
Query: 517 IGAGMLGSVYRAQL--PDGKLLAVK-KLDKRASSQQKDDEFLELVNNIDRIRHANIVELK 573
IG G G V++ P+ LAV K K +S ++FL+ + + H +IV+L
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
G E+ +I E C+ G L+ L K +L + I A + AL YL
Sbjct: 83 GVITENPV-WIIMELCTLGELRSFLQVR---KYSLDLASLILYAYQLSTALAYLE---SK 135
Query: 634 PIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESGIYT 693
VHR+ + N+ V + D GL+ + + + S L +T
Sbjct: 136 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 195
Query: 694 CQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSLSGQY 752
SDV+ FGV M E+L G K + +N D + R ++
Sbjct: 196 SASDVWMFGVCMWEILMHGVKPFQGVKNN----------------DVIGR-IENGERLPM 238
Query: 753 PAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIRRER 793
P ++++C +P RP +E+ L ++ E+
Sbjct: 239 PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEK 279
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 114/279 (40%), Gaps = 50/279 (17%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQK--DDEFLELVNNIDRIRHANIVELKG 574
+G G G+VY A+ K + K+ +A ++ + + V +RH NI+ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 575 YCAEHGQRLLIYEYCSNGT----LQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
Y + + LI EY GT LQ + D++ ++ T + A AL Y H
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ--RTATYITEL------ANALSYCH-- 125
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEF-ES 689
++HR+ K N+ + ++D G + S + L G L Y PE E
Sbjct: 126 -SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL----DYLPPEMIEG 180
Query: 690 GIYTCQSDVYSFGVVMLELLTGR-----KSYDRTRNRGEQFLVRWAIPQLHDIDALSRMV 744
++ + D++S GV+ E L G+ +Y T R +SR+
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR------------------ISRV- 221
Query: 745 DPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQ 783
+P D+ISR ++ P RP + EV++
Sbjct: 222 ----EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 114/279 (40%), Gaps = 50/279 (17%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQK--DDEFLELVNNIDRIRHANIVELKG 574
+G G G+VY A+ K + K+ +A ++ + + V +RH NI+ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 575 YCAEHGQRLLIYEYCSNGT----LQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
Y + + LI EY GT LQ + D++ ++ T + A AL Y H
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ--RTATYITEL------ANALSYCH-- 125
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEF-ES 689
++HR+ K N+ + ++D G + S + L G L Y PE E
Sbjct: 126 -SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTL----DYLPPEMIEG 180
Query: 690 GIYTCQSDVYSFGVVMLELLTGR-----KSYDRTRNRGEQFLVRWAIPQLHDIDALSRMV 744
++ + D++S GV+ E L G+ +Y T R +SR+
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR------------------ISRV- 221
Query: 745 DPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQ 783
+P D+ISR ++ P RP + EV++
Sbjct: 222 ----EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 96/216 (44%), Gaps = 17/216 (7%)
Query: 506 QYTNSFSQENLIGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDEFLELVNNIDRI 564
++ +F + IG G G VY+A+ G+++A+KK+ ++ + ++ + +
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 66
Query: 565 RHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARAL 624
H NIV+L + L++E+ LH D + + S T I + L +
Sbjct: 67 NHPNIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLF 117
Query: 625 EYLH--EICQPP-IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYG 681
+ L C ++HR+ K N+ A+ ++D GLA + G + H +
Sbjct: 118 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLW 175
Query: 682 YGAPEFESG--IYTCQSDVYSFGVVMLELLTGRKSY 715
Y APE G Y+ D++S G + E++T R +
Sbjct: 176 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 211
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 100/215 (46%), Gaps = 27/215 (12%)
Query: 510 SFSQENLIGAGMLGSVYRAQLPD-GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
S++ +IG G G VY+A+L D G+L+A+KK+ + + + ++ L+++ +D H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRE---LQIMRKLD---HCN 74
Query: 569 IVELKGYCAEHGQRL------LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAAR 622
IV L+ + G++ L+ +Y + H + ++ M R
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYM-YQLFR 133
Query: 623 ALEYLHEICQPPIVHRNFKSANIXXXXXXAV-SVSDCGLAPLISSG--SVSQLSGHLLTA 679
+L Y+H I HR+ K N+ AV + D G A + G +VS +
Sbjct: 134 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY--- 187
Query: 680 YGYGAPE--FESGIYTCQSDVYSFGVVMLELLTGR 712
Y APE F + YT DV+S G V+ ELL G+
Sbjct: 188 --YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 130/302 (43%), Gaps = 46/302 (15%)
Query: 515 NLIGAGMLGSVYRA-QLPDG---KLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
++G+G G+VY+ +PDG K+ K+ + +S + + E L+ + + +
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
L G C +L + + G L D + E + L + + A+ + YL ++
Sbjct: 83 RLLGICLTSTVQL-VTQLMPYGCLLDHVR---ENRGRLGSQDLLNWCMQIAKGMSYLEDV 138
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAP----E 686
+VHR+ + N+ V ++D GLA L+ + + H A G P
Sbjct: 139 ---RLVHRDLAARNVLVKSPNHVKITDFGLARLLD---IDETEYH---ADGGKVPIKWMA 189
Query: 687 FESGI---YTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSR 742
ES + +T QSDV+S+GV + EL+T G K YD R IP L ++ R
Sbjct: 190 LESILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAR--------EIPDL--LEKGER 239
Query: 743 MVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIRRER----CSNES 798
+ P P ++ + I+ +C + E RP E+V + M R + NE
Sbjct: 240 LPQP------PICTIDVYM-IMVKCWMIDSECRPRFRELVSEFSRMARDPQRFVVIQNED 292
Query: 799 LG 800
LG
Sbjct: 293 LG 294
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 116/274 (42%), Gaps = 40/274 (14%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQK--DDEFLELVNNIDRIRHANIVELKG 574
+G G G+VY A+ K + K+ +A ++ + + V +RH NI+ L G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 575 YCAEHGQRLLIYEYCSNGT----LQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
Y + + LI EY GT LQ + D++ ++ T + A AL Y H
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ--RTATYITEL------ANALSYCH-- 151
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEF-ES 689
++HR+ K N+ + ++D G + S + L G L Y PE E
Sbjct: 152 -SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL----DYLPPEMIEG 206
Query: 690 GIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSLS 749
++ + D++S GV+ E L G+ ++ N ++ R +SR+
Sbjct: 207 RMHDEKVDLWSLGVLCYEFLVGKPPFE--ANTYQETYKR-----------ISRV-----E 248
Query: 750 GQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQ 783
+P D+ISR ++ P RP + EV++
Sbjct: 249 FTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 282
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 99/225 (44%), Gaps = 19/225 (8%)
Query: 498 SFTIASLQQYTNSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLE 556
S T A Q + ++ IG G V A+ + GK +AVK +DK + +
Sbjct: 3 SATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR 62
Query: 557 LVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRM 616
V + + H NIV+L L+ EY S G + D L + +K + + R
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA-RAKFRQ 121
Query: 617 ALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHL 676
+ A++Y H Q IVHR+ K+ N+ + ++D G + + G+ L
Sbjct: 122 IVS---AVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN------KL 169
Query: 677 LTAYG---YGAPE-FESGIYTC-QSDVYSFGVVMLELLTGRKSYD 716
T G Y APE F+ Y + DV+S GV++ L++G +D
Sbjct: 170 DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 114/279 (40%), Gaps = 50/279 (17%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQK--DDEFLELVNNIDRIRHANIVELKG 574
+G G G+VY A+ K + K+ +A ++ + + V +RH NI+ L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 575 YCAEHGQRLLIYEYCSNGT----LQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
Y + + LI EY GT LQ + D++ ++ T + A AL Y H
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ--RTATYITEL------ANALSYCH-- 126
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FES 689
++HR+ K N+ + ++D G + S + L G L Y PE E
Sbjct: 127 -SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTL----DYLPPEMIEG 181
Query: 690 GIYTCQSDVYSFGVVMLELLTGR-----KSYDRTRNRGEQFLVRWAIPQLHDIDALSRMV 744
++ + D++S GV+ E L G+ +Y T R +SR+
Sbjct: 182 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR------------------ISRV- 222
Query: 745 DPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQ 783
+P D+ISR ++ P RP + EV++
Sbjct: 223 ----EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 257
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 99/225 (44%), Gaps = 19/225 (8%)
Query: 498 SFTIASLQQYTNSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLE 556
S T A Q + ++ IG G V A+ + GK +AVK +DK + +
Sbjct: 3 SATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR 62
Query: 557 LVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRM 616
V + + H NIV+L L+ EY S G + D L + +K + + R
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA-RAKFRQ 121
Query: 617 ALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHL 676
+ A++Y H Q IVHR+ K+ N+ + ++D G + + G+ L
Sbjct: 122 IVS---AVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN------KL 169
Query: 677 LTAYG---YGAPE-FESGIYTC-QSDVYSFGVVMLELLTGRKSYD 716
T G Y APE F+ Y + DV+S GV++ L++G +D
Sbjct: 170 DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 116/284 (40%), Gaps = 37/284 (13%)
Query: 517 IGAGMLGSVYRA-------QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
+G G G VY P+ ++ A+K +++ AS +++ EFL + + ++
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRV-AIKTVNEAASMRERI-EFLNEASVMKEFNCHHV 90
Query: 570 VELKGYCAEHGQRLLIYEYCSNGTLQDMLHS-DDELKNNL-----SWNTRIRMALGAARA 623
V L G ++ L+I E + G L+ L S + NN S + I+MA A
Sbjct: 91 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADG 150
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYG 683
+ YL+ VHR+ + N V + D G+ I + G L +
Sbjct: 151 MAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 207
Query: 684 APE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALS 741
+PE + G++T SDV+SFGVV+ E+ T + Y N EQ L
Sbjct: 208 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN--EQVL--------------- 250
Query: 742 RMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDL 785
R V P +++ C Q P+ RP E++ +
Sbjct: 251 RFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 294
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 120/279 (43%), Gaps = 38/279 (13%)
Query: 511 FSQENLIGAGMLGSVY-----RAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIR 565
F++ IG G G V+ R Q K++A+K +D + + +D E + + +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQ----KVVAIKIIDLEEAEDEIEDIQQE-ITVLSQCD 78
Query: 566 HANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALE 625
+ + G + + +I EY G+ D+L + ++ T +R L + L+
Sbjct: 79 SPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIA--TILREIL---KGLD 133
Query: 626 YLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAP 685
YLH + +HR+ K+AN+ V ++D G+A ++ + + + + AP
Sbjct: 134 YLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR--NXFVGTPFWMAP 188
Query: 686 E-FESGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMV 744
E + Y ++D++S G+ +EL G + FL+ P
Sbjct: 189 EVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP------------ 236
Query: 745 DPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQ 783
P+L G Y +K L F + C+ EP FRP E+++
Sbjct: 237 -PTLEGNY-SKPLKEF---VEACLNKEPSFRPTAKELLK 270
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 97/230 (42%), Gaps = 33/230 (14%)
Query: 506 QYTNSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKL---DKRASSQQKDDEFLELVNNI 561
+Y + F + ++G G G V +A+ D + A+KK+ +++ S+ + L +N+
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQ 62
Query: 562 DRIRHA-------NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRI 614
+R+ N V+ + + EYC N TL D++HS++ N +
Sbjct: 63 YVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENL---NQQRDEYW 119
Query: 615 RMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISS-------- 666
R+ AL Y+H I+HRN K NI V + D GLA +
Sbjct: 120 RLFRQILEALSYIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLD 176
Query: 667 -----GSVSQLSGHLLTAYGYGAPEFESGI--YTCQSDVYSFGVVMLELL 709
GS L+ + TA Y A E G Y + D YS G++ E +
Sbjct: 177 SQNLPGSSDNLTSAIGTA-XYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 114/279 (40%), Gaps = 50/279 (17%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQK--DDEFLELVNNIDRIRHANIVELKG 574
+G G G+VY A+ K + K+ +A ++ + + V +RH NI+ L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 575 YCAEHGQRLLIYEYCSNGT----LQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
Y + + LI EY GT LQ + D++ ++ T + A AL Y H
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ--RTATYITEL------ANALSYCH-- 130
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEF-ES 689
++HR+ K N+ + ++D G + S + L G L Y PE E
Sbjct: 131 -SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTL----DYLPPEMIEG 185
Query: 690 GIYTCQSDVYSFGVVMLELLTGR-----KSYDRTRNRGEQFLVRWAIPQLHDIDALSRMV 744
++ + D++S GV+ E L G+ +Y T R +SR+
Sbjct: 186 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR------------------ISRV- 226
Query: 745 DPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQ 783
+P D+ISR ++ P RP + EV++
Sbjct: 227 ----EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 261
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 114/279 (40%), Gaps = 50/279 (17%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQK--DDEFLELVNNIDRIRHANIVELKG 574
+G G G+VY A+ K + K+ +A ++ + + V +RH NI+ L G
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 575 YCAEHGQRLLIYEYCSNGT----LQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
Y + + LI EY GT LQ + D++ ++ T + A AL Y H
Sbjct: 75 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ--RTATYITEL------ANALSYCH-- 124
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEF-ES 689
++HR+ K N+ + ++D G + S + L G L Y PE E
Sbjct: 125 -SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL----DYLPPEMIEG 179
Query: 690 GIYTCQSDVYSFGVVMLELLTGR-----KSYDRTRNRGEQFLVRWAIPQLHDIDALSRMV 744
++ + D++S GV+ E L G+ +Y T R +SR+
Sbjct: 180 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR------------------ISRV- 220
Query: 745 DPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQ 783
+P D+ISR ++ P RP + EV++
Sbjct: 221 ----EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 255
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 114/279 (40%), Gaps = 50/279 (17%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQK--DDEFLELVNNIDRIRHANIVELKG 574
+G G G+VY A+ K + K+ +A ++ + + V +RH NI+ L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 575 YCAEHGQRLLIYEYCSNGT----LQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
Y + + LI EY GT LQ + D++ ++ T + A AL Y H
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ--RTATYITEL------ANALSYCH-- 130
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEF-ES 689
++HR+ K N+ + ++D G + S + L G L Y PE E
Sbjct: 131 -SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL----DYLPPEMIEG 185
Query: 690 GIYTCQSDVYSFGVVMLELLTGR-----KSYDRTRNRGEQFLVRWAIPQLHDIDALSRMV 744
++ + D++S GV+ E L G+ +Y T R +SR+
Sbjct: 186 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR------------------ISRV- 226
Query: 745 DPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQ 783
+P D+ISR ++ P RP + EV++
Sbjct: 227 ----EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 261
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 99/213 (46%), Gaps = 17/213 (7%)
Query: 505 QQYTNSFSQENLIGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDR 563
++Y +F + IG G G V A + GK +AVKK+D R QQ+ + V +
Sbjct: 44 REYLANFIK---IGEGSTGIVCIATEKHTGKQVAVKKMDLR--KQQRRELLFNEVVIMRD 98
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
H N+V++ + ++ E+ G L D++ + ++ + L RA
Sbjct: 99 YHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----TVCLSVLRA 153
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYG 683
L YLH ++HR+ KS +I + +SD G +S V + + T Y +
Sbjct: 154 LSYLH---NQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSK-EVPKRKXLVGTPY-WM 208
Query: 684 APEFESGI-YTCQSDVYSFGVVMLELLTGRKSY 715
APE S + Y + D++S G++++E++ G Y
Sbjct: 209 APEVISRLPYGTEVDIWSLGIMVIEMIDGEPPY 241
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 114/279 (40%), Gaps = 50/279 (17%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQK--DDEFLELVNNIDRIRHANIVELKG 574
+G G G+VY A+ K + K+ +A ++ + + V +RH NI+ L G
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 575 YCAEHGQRLLIYEYCSNGT----LQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
Y + + LI EY GT LQ + D++ ++ T + A AL Y H
Sbjct: 93 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ--RTATYITEL------ANALSYCH-- 142
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEF-ES 689
++HR+ K N+ + ++D G + S + L G L Y PE E
Sbjct: 143 -SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL----DYLPPEMIEG 197
Query: 690 GIYTCQSDVYSFGVVMLELLTGR-----KSYDRTRNRGEQFLVRWAIPQLHDIDALSRMV 744
++ + D++S GV+ E L G+ +Y T R +SR+
Sbjct: 198 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR------------------ISRV- 238
Query: 745 DPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQ 783
+P D+ISR ++ P RP + EV++
Sbjct: 239 ----EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 273
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 114/279 (40%), Gaps = 50/279 (17%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQK--DDEFLELVNNIDRIRHANIVELKG 574
+G G G+VY A+ K + K+ +A ++ + + V +RH NI+ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 575 YCAEHGQRLLIYEYCSNGT----LQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
Y + + LI EY GT LQ + D++ ++ T + A AL Y H
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ--RTATYITEL------ANALSYCH-- 128
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEF-ES 689
++HR+ K N+ + ++D G + S + L G L Y PE E
Sbjct: 129 -SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL----DYLPPEMIEG 183
Query: 690 GIYTCQSDVYSFGVVMLELLTGR-----KSYDRTRNRGEQFLVRWAIPQLHDIDALSRMV 744
++ + D++S GV+ E L G+ +Y T R +SR+
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR------------------ISRV- 224
Query: 745 DPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQ 783
+P D+ISR ++ P RP + EV++
Sbjct: 225 ----EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 96/216 (44%), Gaps = 17/216 (7%)
Query: 506 QYTNSFSQENLIGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDEFLELVNNIDRI 564
++ +F + IG G G VY+A+ G+++A+KK+ ++ + ++ + +
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 66
Query: 565 RHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARAL 624
H NIV+L + L++E+ LH D + + S T I + L +
Sbjct: 67 NHPNIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLF 117
Query: 625 EYLH--EICQPP-IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYG 681
+ L C ++HR+ K N+ A+ ++D GLA + G + H +
Sbjct: 118 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLW 175
Query: 682 YGAPEFESG--IYTCQSDVYSFGVVMLELLTGRKSY 715
Y APE G Y+ D++S G + E++T R +
Sbjct: 176 YRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALF 211
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 130/290 (44%), Gaps = 37/290 (12%)
Query: 500 TIASLQQYTNSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELV 558
+I S+ +++ IG G G+VY A + G+ +A+++++ + QQ E + +
Sbjct: 11 SIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQ---QQPKKELI--I 65
Query: 559 NNIDRIR---HANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIR 615
N I +R + NIV + ++ EY + G+L D++ + ++ R
Sbjct: 66 NEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR-- 123
Query: 616 MALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGH 675
+ALE+LH ++HR+ KS NI +V ++D G I+ S+ S
Sbjct: 124 ---ECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-SKRSTM 176
Query: 676 LLTAYGYGAPEFES-GIYTCQSDVYSFGVVMLELLTGRKSY-DRTRNRGEQFLVRWAIPQ 733
+ T Y + APE + Y + D++S G++ +E++ G Y + R + P+
Sbjct: 177 VGTPY-WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPE 235
Query: 734 LHDIDALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQ 783
L + + LS + F D ++RC+ + E R E++Q
Sbjct: 236 LQNPEKLSAI----------------FRDFLNRCLDMDVEKRGSAKELLQ 269
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 117/295 (39%), Gaps = 50/295 (16%)
Query: 501 IASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQK--DDEFLELV 558
+ S Q F +G G G+VY A+ K + K+ +A ++ + + V
Sbjct: 3 LGSRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 62
Query: 559 NNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGT----LQDMLHSDDELKNNLSWNTRI 614
+RH NI+ L GY + + LI EY GT LQ + D++ ++ T +
Sbjct: 63 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ--RTATYITEL 120
Query: 615 RMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSG 674
A AL Y H ++HR+ K N+ + ++D G + S L G
Sbjct: 121 ------ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCG 171
Query: 675 HLLTAYGYGAPEF-ESGIYTCQSDVYSFGVVMLELLTGR-----KSYDRTRNRGEQFLVR 728
L Y PE E ++ + D++S GV+ E L G+ +Y T R
Sbjct: 172 TL----DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR------- 220
Query: 729 WAIPQLHDIDALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQ 783
+SR+ +P D+ISR ++ P RP + EV++
Sbjct: 221 -----------ISRV-----EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 111/281 (39%), Gaps = 28/281 (9%)
Query: 517 IGAGMLGSVYRAQL--PDGKLLAVK-KLDKRASSQQKDDEFLELVNNIDRIRHANIVELK 573
IG G G V++ P+ +AV K K +S ++FL+ + + H +IV+L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
G E+ +I E C+ G L+ L K +L + I A + AL YL
Sbjct: 78 GVITENPV-WIIMELCTLGELRSFLQVR---KFSLDLASLILYAYQLSTALAYLE---SK 130
Query: 634 PIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESGIYT 693
VHR+ + N+ V + D GL+ + + + S L +T
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFRRFT 190
Query: 694 CQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSLSGQY 752
SDV+ FGV M E+L G K + +N D + R ++
Sbjct: 191 SASDVWMFGVCMWEILMHGVKPFQGVKNN----------------DVIGR-IENGERLPM 233
Query: 753 PAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIRRER 793
P ++++C +P RP +E+ L ++ E+
Sbjct: 234 PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEK 274
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 114/279 (40%), Gaps = 50/279 (17%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQK--DDEFLELVNNIDRIRHANIVELKG 574
+G G G+VY A+ K + K+ +A ++ + + V +RH NI+ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 575 YCAEHGQRLLIYEYCSNGT----LQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
Y + + LI EY GT LQ + D++ ++ T + A AL Y H
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ--RTATYITEL------ANALSYCH-- 125
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FES 689
++HR+ K N+ + ++D G + S + L G L Y PE E
Sbjct: 126 -SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTL----DYLPPEMIEG 180
Query: 690 GIYTCQSDVYSFGVVMLELLTGR-----KSYDRTRNRGEQFLVRWAIPQLHDIDALSRMV 744
++ + D++S GV+ E L G+ +Y T R +SR+
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR------------------ISRV- 221
Query: 745 DPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQ 783
+P D+ISR ++ P RP + EV++
Sbjct: 222 ----EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 114/279 (40%), Gaps = 50/279 (17%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQK--DDEFLELVNNIDRIRHANIVELKG 574
+G G G+VY A+ K + K+ +A ++ + + V +RH NI+ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 575 YCAEHGQRLLIYEYCSNGT----LQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
Y + + LI EY GT LQ + D++ ++ T + A AL Y H
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ--RTATYITEL------ANALSYCH-- 128
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEF-ES 689
++HR+ K N+ + ++D G + S + L G L Y PE E
Sbjct: 129 -SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL----DYLPPEMIEG 183
Query: 690 GIYTCQSDVYSFGVVMLELLTGR-----KSYDRTRNRGEQFLVRWAIPQLHDIDALSRMV 744
++ + D++S GV+ E L G+ +Y T R +SR+
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR------------------ISRV- 224
Query: 745 DPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQ 783
+P D+ISR ++ P RP + EV++
Sbjct: 225 ----EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 114/279 (40%), Gaps = 50/279 (17%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQK--DDEFLELVNNIDRIRHANIVELKG 574
+G G G+VY A+ K + K+ +A ++ + + V +RH NI+ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 575 YCAEHGQRLLIYEYCSNGT----LQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
Y + + LI EY GT LQ + D++ ++ T + A AL Y H
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ--RTATYITEL------ANALSYCH-- 128
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEF-ES 689
++HR+ K N+ + ++D G + S + L G L Y PE E
Sbjct: 129 -SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTL----DYLPPEMIEG 183
Query: 690 GIYTCQSDVYSFGVVMLELLTGR-----KSYDRTRNRGEQFLVRWAIPQLHDIDALSRMV 744
++ + D++S GV+ E L G+ +Y T R +SR+
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR------------------ISRV- 224
Query: 745 DPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQ 783
+P D+ISR ++ P RP + EV++
Sbjct: 225 ----EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 120/279 (43%), Gaps = 38/279 (13%)
Query: 511 FSQENLIGAGMLGSVY-----RAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIR 565
F++ IG G G V+ R Q K++A+K +D + + +D E + + +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQ----KVVAIKIIDLEEAEDEIEDIQQE-ITVLSQCD 63
Query: 566 HANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALE 625
+ + G + + +I EY G+ D+L + ++ T +R L + L+
Sbjct: 64 SPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIA--TILREIL---KGLD 118
Query: 626 YLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAP 685
YLH + +HR+ K+AN+ V ++D G+A ++ + + + + AP
Sbjct: 119 YLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR--NXFVGTPFWMAP 173
Query: 686 E-FESGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMV 744
E + Y ++D++S G+ +EL G + FL+ P
Sbjct: 174 EVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP------------ 221
Query: 745 DPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQ 783
P+L G Y +K L F + C+ EP FRP E+++
Sbjct: 222 -PTLEGNY-SKPLKEF---VEACLNKEPSFRPTAKELLK 255
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 133/292 (45%), Gaps = 41/292 (14%)
Query: 500 TIASLQQYTNSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELV 558
+I S+ +++ IG G G+VY A + G+ +A+++++ + QQ E + +
Sbjct: 11 SIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQ---QQPKKELI--I 65
Query: 559 NNIDRIR---HANIVE-LKGYCAEHGQRL-LIYEYCSNGTLQDMLHSDDELKNNLSWNTR 613
N I +R + NIV L Y G L ++ EY + G+L D++ + ++ R
Sbjct: 66 NEILVMRENKNPNIVNYLDSYLV--GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR 123
Query: 614 IRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLS 673
+ALE+LH ++HR+ KS NI +V ++D G I+ S+ S
Sbjct: 124 -----ECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-SKRS 174
Query: 674 GHLLTAYGYGAPEFES-GIYTCQSDVYSFGVVMLELLTGRKSY-DRTRNRGEQFLVRWAI 731
+ T Y + APE + Y + D++S G++ +E++ G Y + R +
Sbjct: 175 EMVGTPY-WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT 233
Query: 732 PQLHDIDALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQ 783
P+L + + LS + F D ++RC+ + E R E++Q
Sbjct: 234 PELQNPEKLSAI----------------FRDFLNRCLDMDVEKRGSAKELLQ 269
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 96/219 (43%), Gaps = 15/219 (6%)
Query: 502 ASLQQYTNSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNN 560
A Q + ++ IG G V A+ + G+ +A+K +DK + + V
Sbjct: 8 ADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRI 67
Query: 561 IDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGA 620
+ + H NIV+L LI EY S G + D L + +K + ++ R +
Sbjct: 68 MKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEA-RSKFRQIVS- 125
Query: 621 ARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA-PLISSGSVSQLSGHLLTA 679
A++Y H Q IVHR+ K+ N+ + ++D G + G + G A
Sbjct: 126 --AVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCG----A 176
Query: 680 YGYGAPE-FESGIYTC-QSDVYSFGVVMLELLTGRKSYD 716
Y APE F+ Y + DV+S GV++ L++G +D
Sbjct: 177 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 120/279 (43%), Gaps = 38/279 (13%)
Query: 511 FSQENLIGAGMLGSVY-----RAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIR 565
F++ IG G G V+ R Q K++A+K +D + + +D E + + +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQ----KVVAIKIIDLEEAEDEIEDIQQE-ITVLSQCD 63
Query: 566 HANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALE 625
+ + G + + +I EY G+ D+L + ++ T +R L + L+
Sbjct: 64 SPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIA--TILREIL---KGLD 118
Query: 626 YLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAP 685
YLH + +HR+ K+AN+ V ++D G+A ++ + + + + AP
Sbjct: 119 YLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR--NTFVGTPFWMAP 173
Query: 686 E-FESGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMV 744
E + Y ++D++S G+ +EL G + FL+ P
Sbjct: 174 EVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP------------ 221
Query: 745 DPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQ 783
P+L G Y +K L F + C+ EP FRP E+++
Sbjct: 222 -PTLEGNY-SKPLKEF---VEACLNKEPSFRPTAKELLK 255
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 120/279 (43%), Gaps = 38/279 (13%)
Query: 511 FSQENLIGAGMLGSVY-----RAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIR 565
F++ IG G G V+ R Q K++A+K +D + + +D E + + +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQ----KVVAIKIIDLEEAEDEIEDIQQE-ITVLSQCD 83
Query: 566 HANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALE 625
+ + G + + +I EY G+ D+L + ++ T +R L + L+
Sbjct: 84 SPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIA--TILREIL---KGLD 138
Query: 626 YLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAP 685
YLH + +HR+ K+AN+ V ++D G+A ++ + + + + AP
Sbjct: 139 YLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR--NTFVGTPFWMAP 193
Query: 686 E-FESGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMV 744
E + Y ++D++S G+ +EL G + FL+ P
Sbjct: 194 EVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP------------ 241
Query: 745 DPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQ 783
P+L G Y +K L F + C+ EP FRP E+++
Sbjct: 242 -PTLEGNY-SKPLKEF---VEACLNKEPSFRPTAKELLK 275
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 114/279 (40%), Gaps = 50/279 (17%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQK--DDEFLELVNNIDRIRHANIVELKG 574
+G G G+VY A+ K + K+ +A ++ + + V +RH NI+ L G
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 575 YCAEHGQRLLIYEYCSNGT----LQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
Y + + LI EY GT LQ + D++ ++ T + A AL Y H
Sbjct: 73 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ--RTATYITEL------ANALSYCH-- 122
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG 690
++HR+ K N+ + ++D G + S + L G L Y PE G
Sbjct: 123 -SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL----DYLPPEMIEG 177
Query: 691 -IYTCQSDVYSFGVVMLELLTGR-----KSYDRTRNRGEQFLVRWAIPQLHDIDALSRMV 744
++ + D++S GV+ E L G+ +Y T R +SR+
Sbjct: 178 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR------------------ISRV- 218
Query: 745 DPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQ 783
+P D+ISR ++ P RP + EV++
Sbjct: 219 ----EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 253
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 115/274 (41%), Gaps = 40/274 (14%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQK--DDEFLELVNNIDRIRHANIVELKG 574
+G G G+VY A+ K + K+ +A ++ + + V +RH NI+ L G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 575 YCAEHGQRLLIYEYCSNGT----LQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
Y + + LI EY GT LQ + D++ ++ T + A AL Y H
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ--RTATYITEL------ANALSYCH-- 151
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEF-ES 689
++HR+ K N+ + ++D G + S L G L Y PE E
Sbjct: 152 -SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTL----DYLPPEMIEG 206
Query: 690 GIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSLS 749
++ + D++S GV+ E L G+ ++ N ++ R +SR+
Sbjct: 207 RMHDEKVDLWSLGVLCYEFLVGKPPFE--ANTYQETYKR-----------ISRV-----E 248
Query: 750 GQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQ 783
+P D+ISR ++ P RP + EV++
Sbjct: 249 FTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 282
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 11/212 (5%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
+G G G V A + +AVK +D + + ++ E+ N + H N+V+ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN-KMLNHENVVKFYGH 73
Query: 576 CAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPI 635
E + L EYCS G L D + D + + ++ G YLH I I
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---I 126
Query: 636 VHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEF--ESGIYT 693
HR+ K N+ + +SD GLA + + +L + Y APE +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 694 CQSDVYSFGVVMLELLTGRKSYDRTRNRGEQF 725
DV+S G+V+ +L G +D+ + +++
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 218
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 111/281 (39%), Gaps = 28/281 (9%)
Query: 517 IGAGMLGSVYRAQL--PDGKLLAVK-KLDKRASSQQKDDEFLELVNNIDRIRHANIVELK 573
IG G G V++ P+ +AV K K +S ++FL+ + + H +IV+L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
G E+ +I E C+ G L+ L K +L + I A + AL YL
Sbjct: 78 GVITENPV-WIIMELCTLGELRSFLQVR---KFSLDLASLILYAYQLSTALAYLE---SK 130
Query: 634 PIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESGIYT 693
VHR+ + N+ V + D GL+ + + + S L +T
Sbjct: 131 RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 190
Query: 694 CQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSLSGQY 752
SDV+ FGV M E+L G K + +N D + R ++
Sbjct: 191 SASDVWMFGVCMWEILMHGVKPFQGVKNN----------------DVIGR-IENGERLPM 233
Query: 753 PAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIRRER 793
P ++++C +P RP +E+ L ++ E+
Sbjct: 234 PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEK 274
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 113/279 (40%), Gaps = 50/279 (17%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQK--DDEFLELVNNIDRIRHANIVELKG 574
+G G G+VY A+ K + K+ +A ++ + + V +RH NI+ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 575 YCAEHGQRLLIYEYCSNGT----LQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
Y + + LI EY GT LQ + D++ ++ T + A AL Y H
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ--RTATYITEL------ANALSYCH-- 128
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEF-ES 689
++HR+ K N+ + ++D G + S L G L Y PE E
Sbjct: 129 -SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTL----DYLPPEMIEG 183
Query: 690 GIYTCQSDVYSFGVVMLELLTGR-----KSYDRTRNRGEQFLVRWAIPQLHDIDALSRMV 744
++ + D++S GV+ E L G+ +Y T R +SR+
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR------------------ISRV- 224
Query: 745 DPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQ 783
+P D+ISR ++ P RP + EV++
Sbjct: 225 ----EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 11/212 (5%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
+G G G V A + +AVK +D + + ++ E+ N + H N+V+ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN-KMLNHENVVKFYGH 72
Query: 576 CAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPI 635
E + L EYCS G L D + D + + ++ G YLH I I
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---I 125
Query: 636 VHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEF--ESGIYT 693
HR+ K N+ + +SD GLA + + +L + Y APE +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 694 CQSDVYSFGVVMLELLTGRKSYDRTRNRGEQF 725
DV+S G+V+ +L G +D+ + +++
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 111/281 (39%), Gaps = 28/281 (9%)
Query: 517 IGAGMLGSVYRAQL--PDGKLLAVK-KLDKRASSQQKDDEFLELVNNIDRIRHANIVELK 573
IG G G V++ P+ +AV K K +S ++FL+ + + H +IV+L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
G E+ +I E C+ G L+ L K +L + I A + AL YL
Sbjct: 78 GVITENPV-WIIMELCTLGELRSFLQVR---KYSLDLASLILYAYQLSTALAYLE---SK 130
Query: 634 PIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESGIYT 693
VHR+ + N+ V + D GL+ + + + S L +T
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 190
Query: 694 CQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSLSGQY 752
SDV+ FGV M E+L G K + +N D + R ++
Sbjct: 191 SASDVWMFGVCMWEILMHGVKPFQGVKNN----------------DVIGR-IENGERLPM 233
Query: 753 PAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIRRER 793
P ++++C +P RP +E+ L ++ E+
Sbjct: 234 PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEK 274
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 100/223 (44%), Gaps = 15/223 (6%)
Query: 498 SFTIASLQQYTNSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLE 556
S T A Q + ++ IG G V A+ + GK +AV+ +DK + +
Sbjct: 3 SATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR 62
Query: 557 LVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRM 616
V + + H NIV+L L+ EY S G + D L + +K + + R
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA-RAKFRQ 121
Query: 617 ALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGS-VSQLSGH 675
+ A++Y H Q IVHR+ K+ N+ + ++D G + + G+ + + G
Sbjct: 122 IVS---AVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCG- 174
Query: 676 LLTAYGYGAPE-FESGIYTC-QSDVYSFGVVMLELLTGRKSYD 716
+ Y APE F+ Y + DV+S GV++ L++G +D
Sbjct: 175 ---SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 113/279 (40%), Gaps = 50/279 (17%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQK--DDEFLELVNNIDRIRHANIVELKG 574
+G G G+VY A+ K + K+ +A ++ + + V +RH NI+ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 575 YCAEHGQRLLIYEYCSNGT----LQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
Y + + LI EY GT LQ + D++ ++ T + A AL Y H
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ--RTATYITEL------ANALSYCH-- 125
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FES 689
++HR+ K N+ + ++D G + S L G L Y PE E
Sbjct: 126 -SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTL----DYLPPEMIEG 180
Query: 690 GIYTCQSDVYSFGVVMLELLTGR-----KSYDRTRNRGEQFLVRWAIPQLHDIDALSRMV 744
++ + D++S GV+ E L G+ +Y T R +SR+
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR------------------ISRV- 221
Query: 745 DPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQ 783
+P D+ISR ++ P RP + EV++
Sbjct: 222 ----EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 93/215 (43%), Gaps = 17/215 (7%)
Query: 517 IGAGMLGSVYRAQLPDGKL----LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL 572
+G G G V QL ++ +AVK +D + + ++ E+ N + H N+V+
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN-KMLNHENVVKF 69
Query: 573 KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQ 632
G+ E + L EYCS G L D + D + + ++ G YLH I
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG- 124
Query: 633 PPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEF--ESG 690
I HR+ K N+ + +SD GLA + + +L + Y APE
Sbjct: 125 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 691 IYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQF 725
+ DV+S G+V+ +L G +D+ + +++
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEY 217
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 113/279 (40%), Gaps = 50/279 (17%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQK--DDEFLELVNNIDRIRHANIVELKG 574
+G G G+VY A+ K + K+ +A ++ + + V +RH NI+ L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 575 YCAEHGQRLLIYEYCSNGT----LQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
Y + + LI EY GT LQ + D++ ++ T + A AL Y H
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ--RTATYITEL------ANALSYCH-- 126
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FES 689
++HR+ K N+ + ++D G + S L G L Y PE E
Sbjct: 127 -SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLCGTL----DYLPPEMIEG 181
Query: 690 GIYTCQSDVYSFGVVMLELLTGR-----KSYDRTRNRGEQFLVRWAIPQLHDIDALSRMV 744
++ + D++S GV+ E L G+ +Y T R +SR+
Sbjct: 182 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR------------------ISRV- 222
Query: 745 DPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQ 783
+P D+ISR ++ P RP + EV++
Sbjct: 223 ----EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 257
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 110/274 (40%), Gaps = 29/274 (10%)
Query: 517 IGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
+G G G V + + +P G++ AVK++ +SQ++ +L + + V G
Sbjct: 42 LGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFTVTFYGA 101
Query: 576 CAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPI 635
G + E + +L + + + ++A+ +ALE+LH + +
Sbjct: 102 LFREGDVWICXE-LXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS--KLSV 158
Query: 636 VHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-----FESG 690
+HR+ K +N+ V D G++ + + Y APE
Sbjct: 159 IHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDA---GCKPYXAPERINPELNQK 215
Query: 691 IYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSLSG 750
Y+ +SD++S G+ +EL R YD W P L ++V+ S
Sbjct: 216 GYSVKSDIWSLGITXIELAILRFPYD-----------SWGTP----FQQLKQVVEEP-SP 259
Query: 751 QYPAKSLS-HFADIISRCVQSEPEFRPPMSEVVQ 783
Q PA S F D S+C++ + RP E+ Q
Sbjct: 260 QLPADKFSAEFVDFTSQCLKKNSKERPTYPELXQ 293
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 101/229 (44%), Gaps = 31/229 (13%)
Query: 506 QYTNSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKL---DKRASSQQKDDEFLELVNNI 561
+Y + F + ++G G G V +A+ D + A+KK+ +++ S+ + L +N+
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQ 62
Query: 562 DRIRHA-------NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRI 614
+R+ N V+ + + EYC N TL D++HS++ N +
Sbjct: 63 YVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENL---NQQRDEYW 119
Query: 615 RMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAP---------LIS 665
R+ AL Y+H I+HR+ K NI V + D GLA +
Sbjct: 120 RLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLD 176
Query: 666 SGSVSQLSGHLLTAYG---YGAPEFESGI--YTCQSDVYSFGVVMLELL 709
S ++ S +L +A G Y A E G Y + D+YS G++ E++
Sbjct: 177 SQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 113/279 (40%), Gaps = 50/279 (17%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQK--DDEFLELVNNIDRIRHANIVELKG 574
+G G G+VY A+ K + K+ +A ++ + + V +RH NI+ L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 575 YCAEHGQRLLIYEYCSNGT----LQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
Y + + LI EY GT LQ + D++ ++ T + A AL Y H
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ--RTATYITEL------ANALSYCH-- 130
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FES 689
++HR+ K N+ + ++D G + S + L G L Y PE E
Sbjct: 131 -SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL----DYLPPEXIEG 185
Query: 690 GIYTCQSDVYSFGVVMLELLTGR-----KSYDRTRNRGEQFLVRWAIPQLHDIDALSRMV 744
+ + D++S GV+ E L G+ +Y T R +SR+
Sbjct: 186 RXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR------------------ISRV- 226
Query: 745 DPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQ 783
+P D+ISR ++ P RP + EV++
Sbjct: 227 ----EFTFPDFVTEGARDLISRLLKHNPSQRPXLREVLE 261
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 113/279 (40%), Gaps = 50/279 (17%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQK--DDEFLELVNNIDRIRHANIVELKG 574
+G G G+VY A+ K + K+ +A ++ + + V +RH NI+ L G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 575 YCAEHGQRLLIYEYCSNGT----LQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
Y + + LI EY GT LQ + D++ ++ T + A AL Y H
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ--RTATYITEL------ANALSYCH-- 127
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FES 689
++HR+ K N+ + ++D G + S L G L Y PE E
Sbjct: 128 -SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTL----DYLPPEMIEG 182
Query: 690 GIYTCQSDVYSFGVVMLELLTGR-----KSYDRTRNRGEQFLVRWAIPQLHDIDALSRMV 744
++ + D++S GV+ E L G+ +Y T R +SR+
Sbjct: 183 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR------------------ISRV- 223
Query: 745 DPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQ 783
+P D+ISR ++ P RP + EV++
Sbjct: 224 ----EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 258
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 93/215 (43%), Gaps = 17/215 (7%)
Query: 517 IGAGMLGSVYRAQLPDGKL----LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL 572
+G G G V QL ++ +AVK +D + + ++ E+ N + H N+V+
Sbjct: 13 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN-KMLNHENVVKF 68
Query: 573 KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQ 632
G+ E + L EYCS G L D + D + + ++ G YLH I
Sbjct: 69 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG- 123
Query: 633 PPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEF--ESG 690
I HR+ K N+ + +SD GLA + + +L + Y APE
Sbjct: 124 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 181
Query: 691 IYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQF 725
+ DV+S G+V+ +L G +D+ + +++
Sbjct: 182 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 216
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 11/212 (5%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
+G G G V A + +AVK +D + + ++ E+ N + H N+V+ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN-KMLNHENVVKFYGH 73
Query: 576 CAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPI 635
E + L EYCS G L D + D + + ++ G YLH I I
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---I 126
Query: 636 VHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEF--ESGIYT 693
HR+ K N+ + +SD GLA + + +L + Y APE +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 694 CQSDVYSFGVVMLELLTGRKSYDRTRNRGEQF 725
DV+S G+V+ +L G +D+ + +++
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 218
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 11/212 (5%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
+G G G V A + +AVK +D + + ++ E+ N + H N+V+ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN-KMLNHENVVKFYGH 73
Query: 576 CAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPI 635
E + L EYCS G L D + D + + ++ G YLH I I
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---I 126
Query: 636 VHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEF--ESGIYT 693
HR+ K N+ + +SD GLA + + +L + Y APE +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 694 CQSDVYSFGVVMLELLTGRKSYDRTRNRGEQF 725
DV+S G+V+ +L G +D+ + +++
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 218
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 11/212 (5%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
+G G G V A + +AVK +D + + ++ E+ N + H N+V+ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN-KMLNHENVVKFYGH 73
Query: 576 CAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPI 635
E + L EYCS G L D + D + + ++ G YLH I I
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---I 126
Query: 636 VHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEF--ESGIYT 693
HR+ K N+ + +SD GLA + + +L + Y APE +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 694 CQSDVYSFGVVMLELLTGRKSYDRTRNRGEQF 725
DV+S G+V+ +L G +D+ + +++
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 218
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 112/277 (40%), Gaps = 46/277 (16%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQK--DDEFLELVNNIDRIRHANIVELKG 574
+G G G+VY A+ K + K+ +A ++ + + V +RH NI+ L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 575 YCAEHGQRLLIYEYCSNGTLQDMLH--SDDELKNNLSWNTRIRMALGAARALEYLHEICQ 632
Y + + LI EY G + L S + + ++ T + A AL Y H
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITEL------ANALSYCH---S 131
Query: 633 PPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEF-ESGI 691
++HR+ K N+ + ++D G + S + L G L Y PE E +
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL----DYLPPEMIEGRM 187
Query: 692 YTCQSDVYSFGVVMLELLTGR-----KSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDP 746
+ + D++S GV+ E L G+ +Y T R +SR+
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR------------------ISRV--- 226
Query: 747 SLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQ 783
+P D+ISR ++ P RP + EV++
Sbjct: 227 --EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 261
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 93/215 (43%), Gaps = 17/215 (7%)
Query: 517 IGAGMLGSVYRAQLPDGKL----LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL 572
+G G G V QL ++ +AVK +D + + ++ E+ N + H N+V+
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN-KMLNHENVVKF 69
Query: 573 KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQ 632
G+ E + L EYCS G L D + D + + ++ G YLH I
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG- 124
Query: 633 PPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEF--ESG 690
I HR+ K N+ + +SD GLA + + +L + Y APE
Sbjct: 125 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 691 IYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQF 725
+ DV+S G+V+ +L G +D+ + +++
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 93/215 (43%), Gaps = 17/215 (7%)
Query: 517 IGAGMLGSVYRAQLPDGKL----LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL 572
+G G G V QL ++ +AVK +D + + ++ E+ N + H N+V+
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN-KMLNHENVVKF 69
Query: 573 KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQ 632
G+ E + L EYCS G L D + D + + ++ G YLH I
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG- 124
Query: 633 PPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEF--ESG 690
I HR+ K N+ + +SD GLA + + +L + Y APE
Sbjct: 125 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 691 IYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQF 725
+ DV+S G+V+ +L G +D+ + +++
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 87/205 (42%), Gaps = 15/205 (7%)
Query: 514 ENLIGAGMLGSVYRAQLPDGKL----LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
+ +IG G G VY + D A+K L R + Q+ + FL + + H N+
Sbjct: 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSL-SRITEMQQVEAFLREGLLMRGLNHPNV 84
Query: 570 VELKG-YCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
+ L G G ++ Y +G L + S + N + I L AR +EYL
Sbjct: 85 LALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSP---QRNPTVKDLISFGLQVARGMEYLA 141
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI---SSGSVSQLSGHLLTAYGYGAP 685
E VHR+ + N V V+D GLA I SV Q L
Sbjct: 142 E---QKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALE 198
Query: 686 EFESGIYTCQSDVYSFGVVMLELLT 710
++ +T +SDV+SFGV++ ELLT
Sbjct: 199 SLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 93/215 (43%), Gaps = 17/215 (7%)
Query: 517 IGAGMLGSVYRAQLPDGKL----LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL 572
+G G G V QL ++ +AVK +D + + ++ E+ N + H N+V+
Sbjct: 15 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN-KMLNHENVVKF 70
Query: 573 KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQ 632
G+ E + L EYCS G L D + D + + ++ G YLH I
Sbjct: 71 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG- 125
Query: 633 PPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEF--ESG 690
I HR+ K N+ + +SD GLA + + +L + Y APE
Sbjct: 126 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 691 IYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQF 725
+ DV+S G+V+ +L G +D+ + +++
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 218
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 93/215 (43%), Gaps = 17/215 (7%)
Query: 517 IGAGMLGSVYRAQLPDGKL----LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL 572
+G G G V QL ++ +AVK +D + + ++ E+ N + H N+V+
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN-KMLNHENVVKF 69
Query: 573 KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQ 632
G+ E + L EYCS G L D + D + + ++ G YLH I
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG- 124
Query: 633 PPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEF--ESG 690
I HR+ K N+ + +SD GLA + + +L + Y APE
Sbjct: 125 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 691 IYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQF 725
+ DV+S G+V+ +L G +D+ + +++
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 95/216 (43%), Gaps = 19/216 (8%)
Query: 517 IGAGMLGSVYRAQLPDGKL----LAVKKLD-KRASSQQKDDEFLELVNNIDRIRHANIVE 571
+G G G V QL ++ +AVK +D KRA ++ + +N + + H N+V+
Sbjct: 15 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKM--LNHENVVK 69
Query: 572 LKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEIC 631
G+ E + L EYCS G L D + D + + ++ G YLH I
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG 125
Query: 632 QPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEF--ES 689
I HR+ K N+ + +SD GLA + + +L + Y APE
Sbjct: 126 ---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 182
Query: 690 GIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQF 725
+ DV+S G+V+ +L G +D+ + +++
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 218
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 99/225 (44%), Gaps = 19/225 (8%)
Query: 498 SFTIASLQQYTNSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLE 556
S T A Q + ++ IG G V A+ + GK +AV+ +DK + +
Sbjct: 3 SATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR 62
Query: 557 LVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRM 616
V + + H NIV+L L+ EY S G + D L + +K + + R
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA-RAKFRQ 121
Query: 617 ALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHL 676
+ A++Y H Q IVHR+ K+ N+ + ++D G + + G+ L
Sbjct: 122 IVS---AVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN------KL 169
Query: 677 LTAYG---YGAPE-FESGIYTC-QSDVYSFGVVMLELLTGRKSYD 716
T G Y APE F+ Y + DV+S GV++ L++G +D
Sbjct: 170 DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 19/218 (8%)
Query: 505 QQYTNSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDR 563
Q + ++ + IG G V A+ + G+ +AVK +DK + + V +
Sbjct: 11 QPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKI 70
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+ H NIV+L L+ EY S G + D L + +K + + R + A
Sbjct: 71 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEA-RAKFRQIVS---A 126
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYG-- 681
++Y H Q IVHR+ K+ N+ + ++D G + + G+ L T G
Sbjct: 127 VQYCH---QKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGN------KLDTFCGSP 177
Query: 682 -YGAPE-FESGIYTC-QSDVYSFGVVMLELLTGRKSYD 716
Y APE F+ Y + DV+S GV++ L++G +D
Sbjct: 178 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 84/192 (43%), Gaps = 10/192 (5%)
Query: 536 LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQ 595
+AVK +D + + ++ E+ N + H N+V+ G+ E + L EYCS G L
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICIN-KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELF 92
Query: 596 DMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSV 655
D + D + + ++ G YLH I I HR+ K N+ + +
Sbjct: 93 DRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---ITHRDIKPENLLLDERDNLKI 145
Query: 656 SDCGLAPLISSGSVSQLSGHLLTAYGYGAPEF--ESGIYTCQSDVYSFGVVMLELLTGRK 713
SD GLA + + +L + Y APE + DV+S G+V+ +L G
Sbjct: 146 SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
Query: 714 SYDRTRNRGEQF 725
+D+ + +++
Sbjct: 206 PWDQPSDSCQEY 217
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 95/216 (43%), Gaps = 19/216 (8%)
Query: 517 IGAGMLGSVYRAQLPDGKL----LAVKKLD-KRASSQQKDDEFLELVNNIDRIRHANIVE 571
+G G G V QL ++ +AVK +D KRA ++ + +N + + H N+V+
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKM--LNHENVVK 68
Query: 572 LKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEIC 631
G+ E + L EYCS G L D + D + + ++ G YLH I
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG 124
Query: 632 QPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEF--ES 689
I HR+ K N+ + +SD GLA + + +L + Y APE
Sbjct: 125 ---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 690 GIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQF 725
+ DV+S G+V+ +L G +D+ + +++
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 104/240 (43%), Gaps = 24/240 (10%)
Query: 486 STKTAKPFTTARSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKR 544
S + P + +++L+ F L+G G G VY+ + + G+L A+K +D
Sbjct: 1 SMASDSPARSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMD-- 58
Query: 545 ASSQQKDDEFLELVNNIDRI-RHANIVELKGYCAEHG------QRLLIYEYCSNGTLQDM 597
+ +++E + +N + + H NI G + Q L+ E+C G++ D+
Sbjct: 59 -VTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDL 117
Query: 598 LHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSD 657
+ + W I + R L +LH Q ++HR+ K N+ V + D
Sbjct: 118 IKNTKGNTLKEEWIAYICREI--LRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVD 172
Query: 658 CGLAPLISSGSVSQLSGHLLTAYGYGAPEF------ESGIYTCQSDVYSFGVVMLELLTG 711
G++ + +V + + + T Y + APE Y +SD++S G+ +E+ G
Sbjct: 173 FGVSAQLDR-TVGRRNTFIGTPY-WMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 95/216 (43%), Gaps = 19/216 (8%)
Query: 517 IGAGMLGSVYRAQLPDGKL----LAVKKLD-KRASSQQKDDEFLELVNNIDRIRHANIVE 571
+G G G V QL ++ +AVK +D KRA ++ + +N + + H N+V+
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKM--LNHENVVK 68
Query: 572 LKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEIC 631
G+ E + L EYCS G L D + D + + ++ G YLH I
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG 124
Query: 632 QPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEF--ES 689
I HR+ K N+ + +SD GLA + + +L + Y APE
Sbjct: 125 ---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 690 GIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQF 725
+ DV+S G+V+ +L G +D+ + +++
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 93/215 (43%), Gaps = 17/215 (7%)
Query: 517 IGAGMLGSVYRAQLPDGKL----LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL 572
+G G G V QL ++ +AVK +D + + ++ E+ N + H N+V+
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN-KMLNHENVVKF 69
Query: 573 KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQ 632
G+ E + L EYCS G L D + D + + ++ G YLH I
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG- 124
Query: 633 PPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEF--ESG 690
I HR+ K N+ + +SD GLA + + +L + Y APE
Sbjct: 125 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 691 IYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQF 725
+ DV+S G+V+ +L G +D+ + +++
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 93/215 (43%), Gaps = 17/215 (7%)
Query: 517 IGAGMLGSVYRAQLPDGKL----LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL 572
+G G G V QL ++ +AVK +D + + ++ E+ N + H N+V+
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN-KMLNHENVVKF 69
Query: 573 KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQ 632
G+ E + L EYCS G L D + D + + ++ G YLH I
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG- 124
Query: 633 PPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEF--ESG 690
I HR+ K N+ + +SD GLA + + +L + Y APE
Sbjct: 125 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 691 IYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQF 725
+ DV+S G+V+ +L G +D+ + +++
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 111/281 (39%), Gaps = 28/281 (9%)
Query: 517 IGAGMLGSVYRAQL--PDGKLLAVK-KLDKRASSQQKDDEFLELVNNIDRIRHANIVELK 573
IG G G V++ P+ +AV K K +S ++FL+ + + H +IV+L
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
G E+ +I E C+ G L+ L K +L + I A + AL YL
Sbjct: 458 GVITENPV-WIIMELCTLGELRSFLQVR---KFSLDLASLILYAYQLSTALAYLE---SK 510
Query: 634 PIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESGIYT 693
VHR+ + N+ V + D GL+ + + + S L +T
Sbjct: 511 RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 570
Query: 694 CQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSLSGQY 752
SDV+ FGV M E+L G K + +N D + R ++
Sbjct: 571 SASDVWMFGVCMWEILMHGVKPFQGVKNN----------------DVIGR-IENGERLPM 613
Query: 753 PAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIRRER 793
P ++++C +P RP +E+ L ++ E+
Sbjct: 614 PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEK 654
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 11/212 (5%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
+G G G V A + +AVK +D + + ++ E+ N + H N+V+ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN-KMLNHENVVKFYGH 73
Query: 576 CAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPI 635
E + L EYCS G L D + D + + ++ G YLH I I
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---I 126
Query: 636 VHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEF--ESGIYT 693
HR+ K N+ + +SD GLA + + +L + Y APE +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 694 CQSDVYSFGVVMLELLTGRKSYDRTRNRGEQF 725
DV+S G+V+ +L G +D+ + +++
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 218
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 111/277 (40%), Gaps = 46/277 (16%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQK--DDEFLELVNNIDRIRHANIVELKG 574
+G G G+VY A+ K + K+ +A ++ + + V +RH NI+ L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 575 YCAEHGQRLLIYEYCSNGTLQDMLH--SDDELKNNLSWNTRIRMALGAARALEYLHEICQ 632
Y + + LI EY G + L S + + ++ T + A AL Y H
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITEL------ANALSYCH---S 131
Query: 633 PPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEF-ESGI 691
++HR+ K N+ + ++D G + S L G L Y PE E +
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLXGTL----DYLPPEMIEGRM 187
Query: 692 YTCQSDVYSFGVVMLELLTGR-----KSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDP 746
+ + D++S GV+ E L G+ +Y T R +SR+
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR------------------ISRV--- 226
Query: 747 SLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQ 783
+P D+ISR ++ P RP + EV++
Sbjct: 227 --EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 261
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 111/283 (39%), Gaps = 30/283 (10%)
Query: 516 LIGAGMLGSVYRAQLPDGK----LLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
++G G G VY + K +AVK K + K+ +F+ + + H +IV+
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKE-KFMSEAVIMKNLDHPHIVK 89
Query: 572 LKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEIC 631
L G E +I E G L L + KN+L T + +L +A+ YL I
Sbjct: 90 LIGIIEEEPT-WIIMELYPYGELGHYLERN---KNSLKVLTLVLYSLQICKAMAYLESI- 144
Query: 632 QPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESGI 691
VHR+ NI V + D GL+ I + S L
Sbjct: 145 --NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRR 202
Query: 692 YTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSLSG 750
+T SDV+ F V M E+L+ G++ + N+ I L D L +
Sbjct: 203 FTTASDVWMFAVCMWEILSFGKQPFFWLENKD-------VIGVLEKGDRLPK-------- 247
Query: 751 QYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIRRER 793
P +++RC +P RP +E+V L D+ + E+
Sbjct: 248 --PDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEK 288
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 93/215 (43%), Gaps = 17/215 (7%)
Query: 517 IGAGMLGSVYRAQLPDGKL----LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL 572
+G G G V QL ++ +AVK +D + + ++ E+ N + H N+V+
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN-KMLNHENVVKF 69
Query: 573 KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQ 632
G+ E + L EYCS G L D + D + + ++ G YLH I
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG- 124
Query: 633 PPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEF--ESG 690
I HR+ K N+ + +SD GLA + + +L + Y APE
Sbjct: 125 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 691 IYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQF 725
+ DV+S G+V+ +L G +D+ + +++
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 111/283 (39%), Gaps = 30/283 (10%)
Query: 516 LIGAGMLGSVYRAQLPDGK----LLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
++G G G VY + K +AVK K + K+ +F+ + + H +IV+
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKE-KFMSEAVIMKNLDHPHIVK 77
Query: 572 LKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEIC 631
L G E +I E G L L + KN+L T + +L +A+ YL I
Sbjct: 78 LIG-IIEEEPTWIIMELYPYGELGHYLERN---KNSLKVLTLVLYSLQICKAMAYLESI- 132
Query: 632 QPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESGI 691
VHR+ NI V + D GL+ I + S L
Sbjct: 133 --NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRR 190
Query: 692 YTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSLSG 750
+T SDV+ F V M E+L+ G++ + N+ I L D L +
Sbjct: 191 FTTASDVWMFAVCMWEILSFGKQPFFWLENKD-------VIGVLEKGDRLPK-------- 235
Query: 751 QYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIRRER 793
P +++RC +P RP +E+V L D+ + E+
Sbjct: 236 --PDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEK 276
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 94/213 (44%), Gaps = 17/213 (7%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+F + IG G G VY+A+ G+++A+KK+ ++ + ++ + + H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
NIV+L + L++E+ LH D + + S T I + L + + L
Sbjct: 66 NIVKLLDVIHTENKLYLVFEF---------LHQDLKTFMDASALTGIPLPLIKSYLFQLL 116
Query: 628 H--EICQPP-IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGA 684
C ++HR+ K N+ A+ ++D GLA + G + H + Y A
Sbjct: 117 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRA 174
Query: 685 PEFESG--IYTCQSDVYSFGVVMLELLTGRKSY 715
PE G Y+ D++S G + E++T R +
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 207
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 111/283 (39%), Gaps = 30/283 (10%)
Query: 516 LIGAGMLGSVYRAQLPDGK----LLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVE 571
++G G G VY + K +AVK K + K+ +F+ + + H +IV+
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKE-KFMSEAVIMKNLDHPHIVK 73
Query: 572 LKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEIC 631
L G E +I E G L L + KN+L T + +L +A+ YL I
Sbjct: 74 LIG-IIEEEPTWIIMELYPYGELGHYLERN---KNSLKVLTLVLYSLQICKAMAYLESI- 128
Query: 632 QPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESGI 691
VHR+ NI V + D GL+ I + S L
Sbjct: 129 --NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRR 186
Query: 692 YTCQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSLSG 750
+T SDV+ F V M E+L+ G++ + N+ I L D L +
Sbjct: 187 FTTASDVWMFAVCMWEILSFGKQPFFWLENKD-------VIGVLEKGDRLPK-------- 231
Query: 751 QYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIRRER 793
P +++RC +P RP +E+V L D+ + E+
Sbjct: 232 --PDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEK 272
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/298 (19%), Positives = 120/298 (40%), Gaps = 31/298 (10%)
Query: 503 SLQQYTNSFSQENLIGAGMLGSVYRAQLPD-GKLLAVKKLDKRASSQQKDDEFLELVNNI 561
S+++Y N L+G G G V + + D G+++A+KK + + + + +
Sbjct: 23 SMEKYENL----GLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLL 78
Query: 562 DRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAA 621
++RH N+V L C + + L++E+ + L D+ + N L + +
Sbjct: 79 KQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDL----ELFPNGLDYQVVQKYLFQII 134
Query: 622 RALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYG 681
+ + H I+HR+ K NI V + D G A +++ ++ +
Sbjct: 135 NGIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP--GEVYDDEVATRW 189
Query: 682 YGAPEFESG--IYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDA 739
Y APE G Y DV++ G ++ E+ G + + + + + + L
Sbjct: 190 YRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQ 249
Query: 740 LSRMVDPSLSG--------------QYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQ 783
+P +G +YP S D+ +C+ +P+ RP +E++
Sbjct: 250 ELFNKNPVFAGVRLPEIKEREPLERRYPKLS-EVVIDLAKKCLHIDPDKRPFCAELLH 306
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 93/215 (43%), Gaps = 17/215 (7%)
Query: 517 IGAGMLGSVYRAQLPDGKL----LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL 572
+G G G V QL ++ +AVK +D + + ++ E+ N + H N+V+
Sbjct: 14 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN-KMLNHENVVKF 69
Query: 573 KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQ 632
G+ E + L EYCS G L D + D + + ++ G YLH I
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG- 124
Query: 633 PPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEF--ESG 690
I HR+ K N+ + +SD GLA + + +L + Y APE
Sbjct: 125 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 691 IYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQF 725
+ DV+S G+V+ +L G +D+ + +++
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 111/281 (39%), Gaps = 28/281 (9%)
Query: 517 IGAGMLGSVYRAQL--PDGKLLAVK-KLDKRASSQQKDDEFLELVNNIDRIRHANIVELK 573
IG G G V++ P+ +AV K K +S ++FL+ + + H +IV+L
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
G E+ +I E C+ G L+ L K +L + I A + AL YL
Sbjct: 458 GVITENPV-WIIMELCTLGELRSFLQVR---KFSLDLASLILYAYQLSTALAYLE---SK 510
Query: 634 PIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESGIYT 693
VHR+ + N+ V + D GL+ + + + S L +T
Sbjct: 511 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 570
Query: 694 CQSDVYSFGVVMLELLT-GRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSLSGQY 752
SDV+ FGV M E+L G K + +N D + R ++
Sbjct: 571 SASDVWMFGVCMWEILMHGVKPFQGVKNN----------------DVIGR-IENGERLPM 613
Query: 753 PAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDMIRRER 793
P ++++C +P RP +E+ L ++ E+
Sbjct: 614 PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEK 654
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 114/279 (40%), Gaps = 50/279 (17%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQK--DDEFLELVNNIDRIRHANIVELKG 574
+G G G+VY A+ K + K+ +A ++ + + V +RH NI+ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 575 YCAEHGQRLLIYEYCSNGT----LQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
Y + + LI EY GT LQ + D++ ++ T + A AL Y H
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ--RTATYITEL------ANALSYCH-- 128
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEF-ES 689
++HR+ K N+ + +++ G + S + L G L Y PE E
Sbjct: 129 -SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTL----DYLPPEMIEG 183
Query: 690 GIYTCQSDVYSFGVVMLELLTGR-----KSYDRTRNRGEQFLVRWAIPQLHDIDALSRMV 744
++ + D++S GV+ E L G+ +Y T R +SR+
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR------------------ISRV- 224
Query: 745 DPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQ 783
+P D+ISR ++ P RP + EV++
Sbjct: 225 ----EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 93/215 (43%), Gaps = 17/215 (7%)
Query: 517 IGAGMLGSVYRAQLPDGKL----LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL 572
+G G G V QL ++ +AVK +D + + ++ E+ N + H N+V+
Sbjct: 15 LGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINA-MLNHENVVKF 70
Query: 573 KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQ 632
G+ E + L EYCS G L D + D + + ++ G YLH I
Sbjct: 71 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG- 125
Query: 633 PPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEF--ESG 690
I HR+ K N+ + +SD GLA + + +L + Y APE
Sbjct: 126 --ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 691 IYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQF 725
+ DV+S G+V+ +L G +D+ + +++
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 218
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 94/213 (44%), Gaps = 17/213 (7%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+F + IG G G VY+A+ G+++A+KK+ ++ + ++ + + H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
NIV+L + L++E+ LH D + + S T I + L + + L
Sbjct: 67 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 117
Query: 628 H--EICQPP-IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGA 684
C ++HR+ K N+ A+ ++D GLA + G + H + Y A
Sbjct: 118 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYRA 175
Query: 685 PEFESG--IYTCQSDVYSFGVVMLELLTGRKSY 715
PE G Y+ D++S G + E++T R +
Sbjct: 176 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 208
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 94/213 (44%), Gaps = 17/213 (7%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+F + IG G G VY+A+ G+++A+KK+ ++ + ++ + + H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
NIV+L + L++E+ LH D + + S T I + L + + L
Sbjct: 65 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 115
Query: 628 H--EICQPP-IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGA 684
C ++HR+ K N+ A+ ++D GLA + G + H + Y A
Sbjct: 116 QGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRA 173
Query: 685 PEFESG--IYTCQSDVYSFGVVMLELLTGRKSY 715
PE G Y+ D++S G + E++T R +
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 206
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 94/213 (44%), Gaps = 17/213 (7%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+F + IG G G VY+A+ G+++A+KK+ ++ + ++ + + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
NIV+L + L++E+ LH D + + S T I + L + + L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 628 H--EICQPP-IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGA 684
C ++HR+ K N+ A+ ++D GLA + G + H + Y A
Sbjct: 114 QGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYRA 171
Query: 685 PEFESG--IYTCQSDVYSFGVVMLELLTGRKSY 715
PE G Y+ D++S G + E++T R +
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 95/215 (44%), Gaps = 17/215 (7%)
Query: 507 YTNSFSQENLIGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIR 565
+ +F + IG G G VY+A+ G+++A+KK+ ++ + ++ + +
Sbjct: 2 HMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 566 HANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALE 625
H NIV+L + L++E+ LH D + + S T I + L + +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQ 112
Query: 626 YLH--EICQPP-IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGY 682
L C ++HR+ K N+ A+ ++D GLA + G + H + Y
Sbjct: 113 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWY 170
Query: 683 GAPEFESG--IYTCQSDVYSFGVVMLELLTGRKSY 715
APE G Y+ D++S G + E++T R +
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 205
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 94/213 (44%), Gaps = 17/213 (7%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+F + IG G G VY+A+ G+++A+KK+ ++ + ++ + + H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
NIV+L + L++E+ LH D + + S T I + L + + L
Sbjct: 65 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 115
Query: 628 H--EICQPP-IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGA 684
C ++HR+ K N+ A+ ++D GLA + G + H + Y A
Sbjct: 116 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRA 173
Query: 685 PEFESG--IYTCQSDVYSFGVVMLELLTGRKSY 715
PE G Y+ D++S G + E++T R +
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 206
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 94/213 (44%), Gaps = 17/213 (7%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+F + IG G G VY+A+ G+++A+KK+ ++ + ++ + + H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
NIV+L + L++E+ LH D + + S T I + L + + L
Sbjct: 67 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 117
Query: 628 H--EICQPP-IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGA 684
C ++HR+ K N+ A+ ++D GLA + G + H + Y A
Sbjct: 118 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRA 175
Query: 685 PEFESG--IYTCQSDVYSFGVVMLELLTGRKSY 715
PE G Y+ D++S G + E++T R +
Sbjct: 176 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 208
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 94/213 (44%), Gaps = 17/213 (7%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+F + IG G G VY+A+ G+++A+KK+ ++ + ++ + + H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
NIV+L + L++E+ LH D + + S T I + L + + L
Sbjct: 64 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 114
Query: 628 H--EICQPP-IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGA 684
C ++HR+ K N+ A+ ++D GLA + G + H + Y A
Sbjct: 115 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYRA 172
Query: 685 PEFESG--IYTCQSDVYSFGVVMLELLTGRKSY 715
PE G Y+ D++S G + E++T R +
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 205
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 94/213 (44%), Gaps = 17/213 (7%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+F + IG G G VY+A+ G+++A+KK+ ++ + ++ + + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
NIV+L + L++E+ LH D + + S T I + L + + L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 628 H--EICQPP-IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGA 684
C ++HR+ K N+ A+ ++D GLA + G + H + Y A
Sbjct: 114 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYRA 171
Query: 685 PEFESG--IYTCQSDVYSFGVVMLELLTGRKSY 715
PE G Y+ D++S G + E++T R +
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 94/213 (44%), Gaps = 17/213 (7%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+F + IG G G VY+A+ G+++A+KK+ ++ + ++ + + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
NIV+L + L++E+ LH D + + S T I + L + + L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 628 H--EICQPP-IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGA 684
C ++HR+ K N+ A+ ++D GLA + G + H + Y A
Sbjct: 114 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYRA 171
Query: 685 PEFESG--IYTCQSDVYSFGVVMLELLTGRKSY 715
PE G Y+ D++S G + E++T R +
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 94/213 (44%), Gaps = 17/213 (7%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+F + IG G G VY+A+ G+++A+KK+ ++ + ++ + + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
NIV+L + L++E+ LH D + + S T I + L + + L
Sbjct: 62 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 112
Query: 628 H--EICQPP-IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGA 684
C ++HR+ K N+ A+ ++D GLA + G + H + Y A
Sbjct: 113 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYRA 170
Query: 685 PEFESG--IYTCQSDVYSFGVVMLELLTGRKSY 715
PE G Y+ D++S G + E++T R +
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 94/213 (44%), Gaps = 17/213 (7%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+F + IG G G VY+A+ G+++A+KK+ ++ + ++ + + H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
NIV+L + L++E+ LH D + + S T I + L + + L
Sbjct: 64 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 114
Query: 628 H--EICQPP-IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGA 684
C ++HR+ K N+ A+ ++D GLA + G + H + Y A
Sbjct: 115 QGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRA 172
Query: 685 PEFESG--IYTCQSDVYSFGVVMLELLTGRKSY 715
PE G Y+ D++S G + E++T R +
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 205
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 94/213 (44%), Gaps = 17/213 (7%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+F + IG G G VY+A+ G+++A+KK+ ++ + ++ + + H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
NIV+L + L++E+ LH D + + S T I + L + + L
Sbjct: 66 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 116
Query: 628 H--EICQPP-IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGA 684
C ++HR+ K N+ A+ ++D GLA + G + H + Y A
Sbjct: 117 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRA 174
Query: 685 PEFESG--IYTCQSDVYSFGVVMLELLTGRKSY 715
PE G Y+ D++S G + E++T R +
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 207
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 94/213 (44%), Gaps = 17/213 (7%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+F + IG G G VY+A+ G+++A+KK+ ++ + ++ + + H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
NIV+L + L++E+ LH D + + S T I + L + + L
Sbjct: 65 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 115
Query: 628 H--EICQPP-IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGA 684
C ++HR+ K N+ A+ ++D GLA + G + H + Y A
Sbjct: 116 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRA 173
Query: 685 PEFESG--IYTCQSDVYSFGVVMLELLTGRKSY 715
PE G Y+ D++S G + E++T R +
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 206
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 94/213 (44%), Gaps = 17/213 (7%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+F + IG G G VY+A+ G+++A+KK+ ++ + ++ + + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
NIV+L + L++E+ LH D + + S T I + L + + L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 628 H--EICQPP-IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGA 684
C ++HR+ K N+ A+ ++D GLA + G + H + Y A
Sbjct: 114 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYRA 171
Query: 685 PEFESG--IYTCQSDVYSFGVVMLELLTGRKSY 715
PE G Y+ D++S G + E++T R +
Sbjct: 172 PEILLGXKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 94/213 (44%), Gaps = 17/213 (7%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+F + IG G G VY+A+ G+++A+KK+ ++ + ++ + + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
NIV+L + L++E+ LH D + + S T I + L + + L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 628 H--EICQPP-IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGA 684
C ++HR+ K N+ A+ ++D GLA + G + H + Y A
Sbjct: 114 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRA 171
Query: 685 PEFESG--IYTCQSDVYSFGVVMLELLTGRKSY 715
PE G Y+ D++S G + E++T R +
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 94/213 (44%), Gaps = 17/213 (7%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+F + IG G G VY+A+ G+++A+KK+ ++ + ++ + + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
NIV+L + L++E+ LH D + + S T I + L + + L
Sbjct: 62 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 112
Query: 628 H--EICQPP-IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGA 684
C ++HR+ K N+ A+ ++D GLA + G + H + Y A
Sbjct: 113 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRA 170
Query: 685 PEFESG--IYTCQSDVYSFGVVMLELLTGRKSY 715
PE G Y+ D++S G + E++T R +
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 95/213 (44%), Gaps = 17/213 (7%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+F + IG G G VY+A+ G+++A+KK+ ++ + ++ + + H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
NIV+L + L++E+ LH D + + S T I + L + + L
Sbjct: 66 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 116
Query: 628 HEI--CQPP-IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGA 684
+ C ++HR+ K N+ A+ ++D GLA + G + H + Y A
Sbjct: 117 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRA 174
Query: 685 PEFESG--IYTCQSDVYSFGVVMLELLTGRKSY 715
PE G Y+ D++S G + E++T R +
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 207
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 94/213 (44%), Gaps = 17/213 (7%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+F + IG G G VY+A+ G+++A+KK+ ++ + ++ + + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
NIV+L + L++E+ LH D + + S T I + L + + L
Sbjct: 62 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 112
Query: 628 H--EICQPP-IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGA 684
C ++HR+ K N+ A+ ++D GLA + G + H + Y A
Sbjct: 113 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYRA 170
Query: 685 PEFESG--IYTCQSDVYSFGVVMLELLTGRKSY 715
PE G Y+ D++S G + E++T R +
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 94/213 (44%), Gaps = 17/213 (7%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+F + IG G G VY+A+ G+++A+KK+ ++ + ++ + + H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
NIV+L + L++E+ LH D + + S T I + L + + L
Sbjct: 64 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 114
Query: 628 H--EICQPP-IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGA 684
C ++HR+ K N+ A+ ++D GLA + G + H + Y A
Sbjct: 115 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRA 172
Query: 685 PEFESG--IYTCQSDVYSFGVVMLELLTGRKSY 715
PE G Y+ D++S G + E++T R +
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 205
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 94/213 (44%), Gaps = 17/213 (7%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+F + IG G G VY+A+ G+++A+KK+ ++ + ++ + + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
NIV+L + L++E+ LH D + + S T I + L + + L
Sbjct: 62 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 112
Query: 628 H--EICQPP-IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGA 684
C ++HR+ K N+ A+ ++D GLA + G + H + Y A
Sbjct: 113 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRA 170
Query: 685 PEFESG--IYTCQSDVYSFGVVMLELLTGRKSY 715
PE G Y+ D++S G + E++T R +
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 94/213 (44%), Gaps = 17/213 (7%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+F + IG G G VY+A+ G+++A+KK+ ++ + ++ + + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
NIV+L + L++E+ LH D + + S T I + L + + L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 628 H--EICQPP-IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGA 684
C ++HR+ K N+ A+ ++D GLA + G + H + Y A
Sbjct: 114 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRA 171
Query: 685 PEFESG--IYTCQSDVYSFGVVMLELLTGRKSY 715
PE G Y+ D++S G + E++T R +
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 94/213 (44%), Gaps = 17/213 (7%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+F + IG G G VY+A+ G+++A+KK+ ++ + ++ + + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
NIV+L + L++E+ LH D + + S T I + L + + L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 628 H--EICQPP-IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGA 684
C ++HR+ K N+ A+ ++D GLA + G + H + Y A
Sbjct: 114 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRA 171
Query: 685 PEFESG--IYTCQSDVYSFGVVMLELLTGRKSY 715
PE G Y+ D++S G + E++T R +
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 94/213 (44%), Gaps = 17/213 (7%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+F + IG G G VY+A+ G+++A+KK+ ++ + ++ + + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
NIV+L + L++E+ LH D + + S T I + L + + L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 628 H--EICQPP-IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGA 684
C ++HR+ K N+ A+ ++D GLA + G + H + Y A
Sbjct: 114 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRA 171
Query: 685 PEFESG--IYTCQSDVYSFGVVMLELLTGRKSY 715
PE G Y+ D++S G + E++T R +
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 98/223 (43%), Gaps = 15/223 (6%)
Query: 498 SFTIASLQQYTNSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLE 556
S T A Q + ++ IG G V A+ + GK +AVK +DK + +
Sbjct: 3 SATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR 62
Query: 557 LVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRM 616
V + H NIV+L L+ EY S G + D L + K + + R
Sbjct: 63 EVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEA-RAKFRQ 121
Query: 617 ALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGS-VSQLSGH 675
+ A++Y H Q IVHR+ K+ N+ + ++D G + + G+ + G
Sbjct: 122 IVS---AVQYCH---QKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCG- 174
Query: 676 LLTAYGYGAPE-FESGIYTC-QSDVYSFGVVMLELLTGRKSYD 716
A Y APE F+ Y + DV+S GV++ L++G +D
Sbjct: 175 ---APPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 114/279 (40%), Gaps = 50/279 (17%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQK--DDEFLELVNNIDRIRHANIVELKG 574
+G G G+VY A+ K + K+ +A ++ + + V +RH NI+ L G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 575 YCAEHGQRLLIYEYCSNGT----LQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
Y + + LI EY GT LQ + D++ ++ T + A AL Y H
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ--RTATYITEL------ANALSYCH-- 127
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEF-ES 689
++HR+ K N+ + +++ G + S + L G L Y PE E
Sbjct: 128 -SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTL----DYLPPEMIEG 182
Query: 690 GIYTCQSDVYSFGVVMLELLTGR-----KSYDRTRNRGEQFLVRWAIPQLHDIDALSRMV 744
++ + D++S GV+ E L G+ +Y T R +SR+
Sbjct: 183 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR------------------ISRV- 223
Query: 745 DPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQ 783
+P D+ISR ++ P RP + EV++
Sbjct: 224 ----EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 258
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 96/217 (44%), Gaps = 41/217 (18%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRAS-SQQKDDEFLELVNNIDRIRHANIVELKGY 575
IG G G V+R + G+ +AVK R S ++ E + V +RH NI+ G+
Sbjct: 50 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTV----MLRHENIL---GF 101
Query: 576 CAEHG-------QRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
A Q L+ +Y +G+L D L+ + ++ I++AL A L +LH
Sbjct: 102 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLN-----RYTVTVEGMIKLALSTASGLAHLH 156
Query: 629 -EIC----QPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSG--SVSQLSGHLLTAYG 681
EI +P I HR+ KS NI ++D GLA S ++ H +
Sbjct: 157 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 216
Query: 682 YGAPE----------FESGIYTCQSDVYSFGVVMLEL 708
Y APE FES ++D+Y+ G+V E+
Sbjct: 217 YMAPEVLDDSINMKHFES---FKRADIYAMGLVFWEI 250
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 95/217 (43%), Gaps = 25/217 (11%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+F + IG G G VY+A+ G+++A+KK+ ++ + ++ + + H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
NIV+L + L++E H D +LK + + + L ++ YL
Sbjct: 66 NIVKLLDVIHTENKLYLVFE-----------HVDQDLKKFMDASALTGIPLPLIKS--YL 112
Query: 628 HEICQ-------PPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAY 680
++ Q ++HR+ K N+ A+ ++D GLA + G + H +
Sbjct: 113 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTL 170
Query: 681 GYGAPEFESG--IYTCQSDVYSFGVVMLELLTGRKSY 715
Y APE G Y+ D++S G + E++T R +
Sbjct: 171 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 207
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 11/197 (5%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
IG G G VY+AQ G+ A+KK+ + + ++ + ++H+NIV+L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ +L++E+ QD+ D + L T L + Y H+ ++
Sbjct: 70 HTKKRLVLVFEHLD----QDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHD---RRVL 122
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG--IYTC 694
HR+ K N+ + ++D GLA + G + H + Y AP+ G Y+
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLAR--AFGIPVRKYTHEIVTLWYRAPDVLMGSKKYST 180
Query: 695 QSDVYSFGVVMLELLTG 711
D++S G + E++ G
Sbjct: 181 TIDIWSVGCIFAEMVNG 197
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 96/219 (43%), Gaps = 20/219 (9%)
Query: 517 IGAGMLGSVYRAQLPD-GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
IG G G V++ + D G+++A+KK + L + + +++H N+V L
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 576 CAEHGQRLLIYEYCSNGTLQDMLHSD----DELKNNLSWNTRIRMALGAARALEYLHEIC 631
+ L++EYC + L ++ + L +++W T +A+ + H
Sbjct: 71 FRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQT--------LQAVNFCH--- 119
Query: 632 QPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG- 690
+ +HR+ K NI + + D G A L+ +G + T + Y +PE G
Sbjct: 120 KHNCIHRDVKPENILITKHSVIKLCDFGFARLL-TGPSDYYDDEVATRW-YRSPELLVGD 177
Query: 691 -IYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVR 728
Y DV++ G V ELL+G + + + +L+R
Sbjct: 178 TQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIR 216
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 94/213 (44%), Gaps = 17/213 (7%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+F + IG G G VY+A+ G+++A+KK+ ++ + ++ + + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
NIV+L + L++E+ LH D + + S T I + L + + L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF---------LHQDLKDFMDASALTGIPLPLIKSYLFQLL 113
Query: 628 H--EICQPP-IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGA 684
C ++HR+ K N+ A+ ++D GLA + G + H + Y A
Sbjct: 114 QGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRA 171
Query: 685 PEFESG--IYTCQSDVYSFGVVMLELLTGRKSY 715
PE G Y+ D++S G + E++T R +
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 87/205 (42%), Gaps = 11/205 (5%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
+ F + + +GAG G V + Q L+ +KL ++ + + +
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 75
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
IV G G+ + E+ G+L +L + + ++++ R L YL
Sbjct: 76 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILG----KVSIAVLRGLAYLR 131
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFE 688
E Q I+HR+ K +NI + + D G +S + ++ + Y APE
Sbjct: 132 EKHQ--IMHRDVKPSNILVNSRGEIKLCDFG----VSGQLIDSMANSFVGTRSYMAPERL 185
Query: 689 SGI-YTCQSDVYSFGVVMLELLTGR 712
G Y+ QSD++S G+ ++EL GR
Sbjct: 186 QGTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 96/217 (44%), Gaps = 41/217 (18%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRAS-SQQKDDEFLELVNNIDRIRHANIVELKGY 575
IG G G V+R + G+ +AVK R S ++ E + V +RH NI+ G+
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTV----MLRHENIL---GF 88
Query: 576 CAEHG-------QRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
A Q L+ +Y +G+L D L+ + ++ I++AL A L +LH
Sbjct: 89 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLN-----RYTVTVEGMIKLALSTASGLAHLH 143
Query: 629 -EIC----QPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSG--SVSQLSGHLLTAYG 681
EI +P I HR+ KS NI ++D GLA S ++ H +
Sbjct: 144 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 203
Query: 682 YGAPE----------FESGIYTCQSDVYSFGVVMLEL 708
Y APE FES ++D+Y+ G+V E+
Sbjct: 204 YMAPEVLDDSINMKHFES---FKRADIYAMGLVFWEI 237
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 96/217 (44%), Gaps = 41/217 (18%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRAS-SQQKDDEFLELVNNIDRIRHANIVELKGY 575
IG G G V+R + G+ +AVK R S ++ E + V +RH NI+ G+
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTV----MLRHENIL---GF 62
Query: 576 CAEHG-------QRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
A Q L+ +Y +G+L D L+ + ++ I++AL A L +LH
Sbjct: 63 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLN-----RYTVTVEGMIKLALSTASGLAHLH 117
Query: 629 -EIC----QPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSG--SVSQLSGHLLTAYG 681
EI +P I HR+ KS NI ++D GLA S ++ H +
Sbjct: 118 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 177
Query: 682 YGAPE----------FESGIYTCQSDVYSFGVVMLEL 708
Y APE FES ++D+Y+ G+V E+
Sbjct: 178 YMAPEVLDDSINMKHFES---FKRADIYAMGLVFWEI 211
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 96/217 (44%), Gaps = 41/217 (18%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRAS-SQQKDDEFLELVNNIDRIRHANIVELKGY 575
IG G G V+R + G+ +AVK R S ++ E + V +RH NI+ G+
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTV----MLRHENIL---GF 63
Query: 576 CAEHG-------QRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
A Q L+ +Y +G+L D L+ + ++ I++AL A L +LH
Sbjct: 64 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLN-----RYTVTVEGMIKLALSTASGLAHLH 118
Query: 629 -EIC----QPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSG--SVSQLSGHLLTAYG 681
EI +P I HR+ KS NI ++D GLA S ++ H +
Sbjct: 119 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 178
Query: 682 YGAPE----------FESGIYTCQSDVYSFGVVMLEL 708
Y APE FES ++D+Y+ G+V E+
Sbjct: 179 YMAPEVLDDSINMKHFES---FKRADIYAMGLVFWEI 212
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 11/197 (5%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
IG G G VY+AQ G+ A+KK+ + + ++ + ++H+NIV+L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ +L++E+ QD+ D + L T L + Y H+ ++
Sbjct: 70 HTKKRLVLVFEHLD----QDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHD---RRVL 122
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG--IYTC 694
HR+ K N+ + ++D GLA + G + H + Y AP+ G Y+
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLAR--AFGIPVRKYTHEVVTLWYRAPDVLMGSKKYST 180
Query: 695 QSDVYSFGVVMLELLTG 711
D++S G + E++ G
Sbjct: 181 TIDIWSVGCIFAEMVNG 197
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 11/197 (5%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
IG G G VY+AQ G+ A+KK+ + + ++ + ++H+NIV+L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
+ +L++E+ QD+ D + L T L + Y H+ ++
Sbjct: 70 HTKKRLVLVFEHLD----QDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHD---RRVL 122
Query: 637 HRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG--IYTC 694
HR+ K N+ + ++D GLA + G + H + Y AP+ G Y+
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLAR--AFGIPVRKYTHEVVTLWYRAPDVLMGSKKYST 180
Query: 695 QSDVYSFGVVMLELLTG 711
D++S G + E++ G
Sbjct: 181 TIDIWSVGCIFAEMVNG 197
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 92/206 (44%), Gaps = 19/206 (9%)
Query: 517 IGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
IG G V A+ + GK +AVK +DK + + V + + H NIV+L
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 74
Query: 576 CAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPI 635
L+ EY S G + D L + +K + + R + A++Y H Q I
Sbjct: 75 IETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEA-RAKFRQIVS---AVQYCH---QKFI 127
Query: 636 VHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYG---YGAPE-FESGI 691
VHR+ K+ N+ + ++D G + + G+ L T G Y APE F+
Sbjct: 128 VHRDLKAENLLLDADMNIKIADFGFSNEFTFGN------KLDTFCGSPPYAAPELFQGKK 181
Query: 692 YTC-QSDVYSFGVVMLELLTGRKSYD 716
Y + DV+S GV++ L++G +D
Sbjct: 182 YDGPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 96/217 (44%), Gaps = 41/217 (18%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRAS-SQQKDDEFLELVNNIDRIRHANIVELKGY 575
IG G G V+R + G+ +AVK R S ++ E + V +RH NI+ G+
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTV----MLRHENIL---GF 68
Query: 576 CAEHG-------QRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
A Q L+ +Y +G+L D L+ + ++ I++AL A L +LH
Sbjct: 69 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLN-----RYTVTVEGMIKLALSTASGLAHLH 123
Query: 629 -EIC----QPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSG--SVSQLSGHLLTAYG 681
EI +P I HR+ KS NI ++D GLA S ++ H +
Sbjct: 124 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 183
Query: 682 YGAPE----------FESGIYTCQSDVYSFGVVMLEL 708
Y APE FES ++D+Y+ G+V E+
Sbjct: 184 YMAPEVLDDSINMKHFES---FKRADIYAMGLVFWEI 217
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 96/217 (44%), Gaps = 41/217 (18%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRAS-SQQKDDEFLELVNNIDRIRHANIVELKGY 575
IG G G V+R + G+ +AVK R S ++ E + V +RH NI+ G+
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTV----MLRHENIL---GF 65
Query: 576 CAEHG-------QRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
A Q L+ +Y +G+L D L+ + ++ I++AL A L +LH
Sbjct: 66 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLN-----RYTVTVEGMIKLALSTASGLAHLH 120
Query: 629 -EIC----QPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSG--SVSQLSGHLLTAYG 681
EI +P I HR+ KS NI ++D GLA S ++ H +
Sbjct: 121 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 180
Query: 682 YGAPE----------FESGIYTCQSDVYSFGVVMLEL 708
Y APE FES ++D+Y+ G+V E+
Sbjct: 181 YMAPEVLDDSINMKHFES---FKRADIYAMGLVFWEI 214
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 85/197 (43%), Gaps = 6/197 (3%)
Query: 517 IGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
IG G G + + DGK+L K+LD + ++ + + VN + ++H NIV
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 576 CAEHGQRLL--IYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQ- 632
+ L + EYC G L ++ + + L +R+ AL+ H
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 633 -PPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESGI 691
++HR+ K AN+ V + D GLA +++ + S + T Y +
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDT-SFAKAFVGTPYYMSPEQMNRMS 192
Query: 692 YTCQSDVYSFGVVMLEL 708
Y +SD++S G ++ EL
Sbjct: 193 YNEKSDIWSLGCLLYEL 209
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 94/223 (42%), Gaps = 23/223 (10%)
Query: 506 QYTNSFSQENLIGAGMLGSVYRAQLPD-GKLLAVKKLDKRASSQQKDDEFLELVNNIDRI 564
Q + + +G G G V R D G+ +A+K+ + S + ++ LE + + ++
Sbjct: 12 QTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLE-IQIMKKL 70
Query: 565 RHANIVELKGY------CAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNT-RIRMA 617
H N+V + A + LL EYC G L+ L ++ +N IR
Sbjct: 71 NHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYL---NQFENCCGLKEGPIRTL 127
Query: 618 LG-AARALEYLHEICQPPIVHRNFKSANIXXX---XXXAVSVSDCGLAPLISSGSVSQLS 673
L + AL YLHE I+HR+ K NI + D G A + G +L
Sbjct: 128 LSDISSALRYLHE---NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQG---ELC 181
Query: 674 GHLLTAYGYGAPEF-ESGIYTCQSDVYSFGVVMLELLTGRKSY 715
+ Y APE E YT D +SFG + E +TG + +
Sbjct: 182 TEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 101/240 (42%), Gaps = 30/240 (12%)
Query: 517 IGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
IG G +VY+ + + +A +L R ++ + F E + ++H NIV
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDS 93
Query: 576 CAE--HGQR--LLIYEYCSNGTLQDMLH--SDDELKNNLSWNTRIRMALGAARALEYLHE 629
G++ +L+ E ++GTL+ L ++K SW +I + L++LH
Sbjct: 94 WESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQI------LKGLQFLH- 146
Query: 630 ICQPPIVHRNFKSANIXXXX-XXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFE 688
PPI+HR+ K NI +V + D GLA L + + G + APE
Sbjct: 147 TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIG----TPEFXAPEXY 202
Query: 689 SGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQF-----------LVRWAIPQLHDI 737
Y DVY+FG LE T Y +N + + + AIP++ +I
Sbjct: 203 EEKYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEI 262
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 91/210 (43%), Gaps = 11/210 (5%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+F + IG G G VY+A+ G+++A+KK+ ++ + ++ + + H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
NIV+L + L++E+ S L+D + + L L A +
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLSMD-LKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 628 HEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEF 687
H ++HR+ K N+ A+ ++D GLA + G + H + Y APE
Sbjct: 124 HR-----VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRAPEI 176
Query: 688 ESG--IYTCQSDVYSFGVVMLELLTGRKSY 715
G Y+ D++S G + E++T R +
Sbjct: 177 LLGCKYYSTAVDIWSLGCIFAEMVTRRALF 206
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 94/223 (42%), Gaps = 23/223 (10%)
Query: 506 QYTNSFSQENLIGAGMLGSVYRAQLPD-GKLLAVKKLDKRASSQQKDDEFLELVNNIDRI 564
Q + + +G G G V R D G+ +A+K+ + S + ++ LE + + ++
Sbjct: 11 QTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLE-IQIMKKL 69
Query: 565 RHANIVELKGY------CAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNT-RIRMA 617
H N+V + A + LL EYC G L+ L ++ +N IR
Sbjct: 70 NHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYL---NQFENCCGLKEGPIRTL 126
Query: 618 LG-AARALEYLHEICQPPIVHRNFKSANIXXX---XXXAVSVSDCGLAPLISSGSVSQLS 673
L + AL YLHE I+HR+ K NI + D G A + G +L
Sbjct: 127 LSDISSALRYLHE---NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQG---ELC 180
Query: 674 GHLLTAYGYGAPEF-ESGIYTCQSDVYSFGVVMLELLTGRKSY 715
+ Y APE E YT D +SFG + E +TG + +
Sbjct: 181 TEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 91/210 (43%), Gaps = 11/210 (5%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+F + IG G G VY+A+ G+++A+KK+ ++ + ++ + + H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
NIV+L + L++E+ S L+D + + L L A +
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLSMD-LKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 628 HEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEF 687
H ++HR+ K N+ A+ ++D GLA + G + H + Y APE
Sbjct: 125 HR-----VLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRAPEI 177
Query: 688 ESG--IYTCQSDVYSFGVVMLELLTGRKSY 715
G Y+ D++S G + E++T R +
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVTRRALF 207
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 94/213 (44%), Gaps = 17/213 (7%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+F + IG G G VY+A+ G+++A+KK+ ++ + ++ + + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
NIV+L + L++E+ +H D + + S T I + L + + L
Sbjct: 62 NIVKLLDVIHTENKLYLVFEH---------VHQDLKTFMDASALTGIPLPLIKSYLFQLL 112
Query: 628 H--EICQPP-IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGA 684
C ++HR+ K N+ A+ ++D GLA + G + H + Y A
Sbjct: 113 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYRA 170
Query: 685 PEFESG--IYTCQSDVYSFGVVMLELLTGRKSY 715
PE G Y+ D++S G + E++T R +
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 18/203 (8%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL-KG 574
IG G G V A + G+ +AVK +D R QQ+ + V + +H N+VE+ K
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLR--KQQRRELLFNEVVIMRDYQHFNVVEMYKS 110
Query: 575 YCAEHGQRL-LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
Y G+ L ++ E+ G L D++ + L+ + +AL YLH
Sbjct: 111 YLV--GEELWVLMEFLQGGALTDIVS-----QVRLNEEQIATVCEAVLQALAYLHA---Q 160
Query: 634 PIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFES-GIY 692
++HR+ KS +I V +SD G IS V + + T Y + APE S +Y
Sbjct: 161 GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISK-DVPKRKXLVGTPY-WMAPEVISRSLY 218
Query: 693 TCQSDVYSFGVVMLELLTGRKSY 715
+ D++S G++++E++ G Y
Sbjct: 219 ATEVDIWSLGIMVIEMVDGEPPY 241
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 95/204 (46%), Gaps = 15/204 (7%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLEL-VNNIDRIRHANIVELKG 574
+G G G V A G+ +A+K ++K+ ++ +E ++ + +RH +I++L
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 71
Query: 575 YCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPP 634
+ +++ EY N ++ D +S R A+EY H +
Sbjct: 72 VIKSKDEIIMVIEYAGNELFDYIVQRD-----KMSEQEARRFFQQIISAVEYCH---RHK 123
Query: 635 IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG-IYT 693
IVHR+ K N+ V ++D GL+ +++ G+ + S + Y APE SG +Y
Sbjct: 124 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS---CGSPNYAAPEVISGKLYA 180
Query: 694 C-QSDVYSFGVVMLELLTGRKSYD 716
+ DV+S GV++ +L R +D
Sbjct: 181 GPEVDVWSCGVILYVMLCRRLPFD 204
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 98/205 (47%), Gaps = 15/205 (7%)
Query: 511 FSQENLIGAGMLGSVYRAQLPD-GKLLAVKKLDKRASSQQKDD---EFLELVNNIDRIRH 566
+ + + +G G +VY+A+ + +++A+KK+ S+ KD L + + + H
Sbjct: 12 YEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSH 71
Query: 567 ANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEY 626
NI+ L L++++ T +++ D+ L S + + M L + LEY
Sbjct: 72 PNIIGLLDAFGHKSNISLVFDFME--TDLEVIIKDNSLVLTPS-HIKAYM-LMTLQGLEY 127
Query: 627 LHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE 686
LH Q I+HR+ K N+ + ++D GLA S GS ++ H + Y APE
Sbjct: 128 LH---QHWILHRDLKPNNLLLDENGVLKLADFGLAK--SFGSPNRAYXHQVVTRWYRAPE 182
Query: 687 --FESGIYTCQSDVYSFGVVMLELL 709
F + +Y D+++ G ++ ELL
Sbjct: 183 LLFGARMYGVGVDMWAVGCILAELL 207
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 85/197 (43%), Gaps = 6/197 (3%)
Query: 517 IGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
IG G G + + DGK+L K+LD + ++ + + VN + ++H NIV
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 576 CAEHGQRLL--IYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQ- 632
+ L + EYC G L ++ + + L +R+ AL+ H
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 633 -PPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESGI 691
++HR+ K AN+ V + D GLA +++ + S + T Y +
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDT-SFAKTFVGTPYYMSPEQMNRMS 192
Query: 692 YTCQSDVYSFGVVMLEL 708
Y +SD++S G ++ EL
Sbjct: 193 YNEKSDIWSLGCLLYEL 209
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 95/204 (46%), Gaps = 15/204 (7%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLEL-VNNIDRIRHANIVELKG 574
+G G G V A G+ +A+K ++K+ ++ +E ++ + +RH +I++L
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 80
Query: 575 YCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPP 634
+ +++ EY N ++ D +S R A+EY H +
Sbjct: 81 VIKSKDEIIMVIEYAGNELFDYIVQRD-----KMSEQEARRFFQQIISAVEYCH---RHK 132
Query: 635 IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG-IYT 693
IVHR+ K N+ V ++D GL+ +++ G+ + S + Y APE SG +Y
Sbjct: 133 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS---CGSPNYAAPEVISGKLYA 189
Query: 694 C-QSDVYSFGVVMLELLTGRKSYD 716
+ DV+S GV++ +L R +D
Sbjct: 190 GPEVDVWSCGVILYVMLCRRLPFD 213
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 95/204 (46%), Gaps = 15/204 (7%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLEL-VNNIDRIRHANIVELKG 574
+G G G V A G+ +A+K ++K+ ++ +E ++ + +RH +I++L
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 75
Query: 575 YCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPP 634
+ +++ EY N ++ D +S R A+EY H +
Sbjct: 76 VIKSKDEIIMVIEYAGNELFDYIVQRD-----KMSEQEARRFFQQIISAVEYCH---RHK 127
Query: 635 IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG-IYT 693
IVHR+ K N+ V ++D GL+ +++ G+ + S + Y APE SG +Y
Sbjct: 128 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS---CGSPNYAAPEVISGKLYA 184
Query: 694 C-QSDVYSFGVVMLELLTGRKSYD 716
+ DV+S GV++ +L R +D
Sbjct: 185 GPEVDVWSCGVILYVMLCRRLPFD 208
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 95/204 (46%), Gaps = 15/204 (7%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLEL-VNNIDRIRHANIVELKG 574
+G G G V A G+ +A+K ++K+ ++ +E ++ + +RH +I++L
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 81
Query: 575 YCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPP 634
+ +++ EY N ++ D +S R A+EY H +
Sbjct: 82 VIKSKDEIIMVIEYAGNELFDYIVQRD-----KMSEQEARRFFQQIISAVEYCH---RHK 133
Query: 635 IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG-IYT 693
IVHR+ K N+ V ++D GL+ +++ G+ + S + Y APE SG +Y
Sbjct: 134 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS---CGSPNYAAPEVISGKLYA 190
Query: 694 C-QSDVYSFGVVMLELLTGRKSYD 716
+ DV+S GV++ +L R +D
Sbjct: 191 GPEVDVWSCGVILYVMLCRRLPFD 214
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 93/213 (43%), Gaps = 17/213 (7%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+F + IG G G VY+A+ G+++A+ K+ ++ + ++ + + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
NIV+L + L++E+ LH D + + S T I + L + + L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 113
Query: 628 H--EICQPP-IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGA 684
C ++HR+ K N+ A+ ++D GLA + G + H + Y A
Sbjct: 114 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYRA 171
Query: 685 PEFESG--IYTCQSDVYSFGVVMLELLTGRKSY 715
PE G Y+ D++S G + E++T R +
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 204
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 93/213 (43%), Gaps = 17/213 (7%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+F + IG G G VY+A+ G+++A+ K+ ++ + ++ + + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
NIV+L + L++E+ LH D + + S T I + L + + L
Sbjct: 62 NIVKLLDVIHTENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIKSYLFQLL 112
Query: 628 H--EICQPP-IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGA 684
C ++HR+ K N+ A+ ++D GLA + G + H + Y A
Sbjct: 113 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR--AFGVPVRTYTHEVVTLWYRA 170
Query: 685 PEFESG--IYTCQSDVYSFGVVMLELLTGRKSY 715
PE G Y+ D++S G + E++T R +
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 203
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 99/228 (43%), Gaps = 31/228 (13%)
Query: 501 IASLQQYT-NSFSQENLIGAGMLGSVYRAQLPDGK-LLAVK-----KLDKRASSQQKDDE 553
+ S +Q+T F +G G G+VY A+ K +LA+K +L+K Q E
Sbjct: 3 LGSKRQWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRRE 62
Query: 554 FLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGT----LQDMLHSDDELKNNLS 609
V +RH NI+ L GY + + LI EY GT LQ + D++ +
Sbjct: 63 ----VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQ--RTAT 116
Query: 610 WNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSV 669
+ T + A AL Y H ++HR+ K N+ + ++D G + S
Sbjct: 117 YITEL------ANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR 167
Query: 670 SQLSGHLLTAYGYGAPEFESG-IYTCQSDVYSFGVVMLELLTGRKSYD 716
+ L G L Y PE G ++ + D++S GV+ E L G ++
Sbjct: 168 TTLCGTL----DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 110/261 (42%), Gaps = 29/261 (11%)
Query: 533 GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQR--LLIYEYCS 590
G+++AVK L + Q + E + + + H +IV+ KG C + G++ L+ EY
Sbjct: 37 GEMVAVKALKEGCGPQLRSGWQRE-IEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVP 95
Query: 591 NGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQ-------PPIVHRNFKSA 643
G+L+D L R +G A+ L + +IC+ +HR +
Sbjct: 96 LGSLRDYL---------------PRHCVGLAQLLLFAQQICEGMAYLHAQHYIHRALAAR 140
Query: 644 NIXXXXXXAVSVSDCGLAPLISSG-SVSQLSGHLLTAYGYGAPE-FESGIYTCQSDVYSF 701
N+ V + D GLA + G ++ + + APE + + SDV+SF
Sbjct: 141 NVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSF 200
Query: 702 GVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSLSGQYPAKSLSHFA 761
GV + ELLT S + + L+ Q+ + L+ +++ P +
Sbjct: 201 GVTLYELLTYCDSNQSPHTKFTE-LIGHTQGQM-TVLRLTELLERGERLPRPDRCPCEIY 258
Query: 762 DIISRCVQSEPEFRPPMSEVV 782
++ C ++E FRP +V
Sbjct: 259 HLMKNCWETEASFRPTFQNLV 279
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 131/330 (39%), Gaps = 41/330 (12%)
Query: 480 GTAVKTSTKTAKPFTTARSFTIASLQQYTNSFSQ---ENLIGAGMLGSVYRAQLPDGKLL 536
G + S +A+ F S T LQ++ F Q LIG G G VY + G++
Sbjct: 1 GPEMNLSLLSARSFPRKASQTSIFLQEWDIPFEQLEIGELIGKGRFGQVYHGRW-HGEV- 58
Query: 537 AVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQD 596
A++ +D ++ + F V + RH N+V G C +I C TL
Sbjct: 59 AIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYS 118
Query: 597 MLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVS 656
++ + K L N ++A + + YLH I+H++ KS N+ V ++
Sbjct: 119 VVR---DAKIVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYDNGKVV-IT 171
Query: 657 DCGLAPLISSGSVSQLSGHLLTAYGY---GAPEFESGI----------YTCQSDVYSFGV 703
D GL + + L G+ APE + ++ SDV++ G
Sbjct: 172 DFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGT 231
Query: 704 VMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSLSGQYPAKSLSHFADI 763
+ E L R+ +T+ P I + + P+LS K +S DI
Sbjct: 232 IWYE-LHAREWPFKTQ------------PAEAIIWQMGTGMKPNLSQIGMGKEIS---DI 275
Query: 764 ISRCVQSEPEFRPPMSEVVQDLVDMIRRER 793
+ C E E RP ++++ L + +R R
Sbjct: 276 LLFCWAFEQEERPTFTKLMDMLEKLPKRNR 305
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 110/261 (42%), Gaps = 29/261 (11%)
Query: 533 GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQR--LLIYEYCS 590
G+++AVK L + Q + E + + + H +IV+ KG C + G++ L+ EY
Sbjct: 38 GEMVAVKALKEGCGPQLRSGWQRE-IEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVP 96
Query: 591 NGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQ-------PPIVHRNFKSA 643
G+L+D L R +G A+ L + +IC+ +HR +
Sbjct: 97 LGSLRDYL---------------PRHCVGLAQLLLFAQQICEGMAYLHAQHYIHRALAAR 141
Query: 644 NIXXXXXXAVSVSDCGLAPLISSG-SVSQLSGHLLTAYGYGAPE-FESGIYTCQSDVYSF 701
N+ V + D GLA + G ++ + + APE + + SDV+SF
Sbjct: 142 NVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSF 201
Query: 702 GVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSLSGQYPAKSLSHFA 761
GV + ELLT S + + L+ Q+ + L+ +++ P +
Sbjct: 202 GVTLYELLTYCDSNQSPHTKFTE-LIGHTQGQM-TVLRLTELLERGERLPRPDRCPCEIY 259
Query: 762 DIISRCVQSEPEFRPPMSEVV 782
++ C ++E FRP +V
Sbjct: 260 HLMKNCWETEASFRPTFQNLV 280
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 94/221 (42%), Gaps = 23/221 (10%)
Query: 504 LQQYTNSFSQENL-----IGAGMLGSVYRAQL--PDGKLL--AVKKLDKRASSQ-QKDDE 553
LQ T +++L +G G G V R + P GK + AVK L SQ + D+
Sbjct: 8 LQSLTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDD 67
Query: 554 FLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDML--HSDDELKNNLSWN 611
F+ VN + + H N++ L G + ++ E G+L D L H L LS
Sbjct: 68 FIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLS-- 124
Query: 612 TRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA-PLISSGSVS 670
R A+ A + YL +HR+ + N+ V + D GL L +
Sbjct: 125 ---RYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHX 178
Query: 671 QLSGHLLTAYGYGAPE-FESGIYTCQSDVYSFGVVMLELLT 710
+ H + + APE ++ ++ SD + FGV + E+ T
Sbjct: 179 VMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 93/213 (43%), Gaps = 17/213 (7%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+F + IG G G VY+A+ G+++A+KK+ ++ + ++ + + H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
NIV+L + L++E+ S + M + S T I + L + + L
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLSMDLKKFM---------DASALTGIPLPLIKSYLFQLL 116
Query: 628 H--EICQPP-IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGA 684
C ++HR+ K N+ A+ ++D GLA + G + H + Y A
Sbjct: 117 QGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRA 174
Query: 685 PEFESG--IYTCQSDVYSFGVVMLELLTGRKSY 715
PE G Y+ D++S G + E++T R +
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 207
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 87/198 (43%), Gaps = 8/198 (4%)
Query: 517 IGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
IG G G + + DGK+L K+LD + ++ + + VN + ++H NIV
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 576 CAEHGQRLL--IYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQ- 632
+ L + EYC G L ++ + + L +R+ AL+ H
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 633 -PPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESGI 691
++HR+ K AN+ V + D GLA +++ + + Y +PE + +
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD--EDFAKEFVGTPYYMSPEQMNRM 191
Query: 692 -YTCQSDVYSFGVVMLEL 708
Y +SD++S G ++ EL
Sbjct: 192 SYNEKSDIWSLGCLLYEL 209
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 93/213 (43%), Gaps = 17/213 (7%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+F + IG G G VY+A+ G+++A+KK+ ++ + ++ + + H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
NIV+L + L++E+ S + M + S T I + L + + L
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLSMDLKKFM---------DASALTGIPLPLIKSYLFQLL 114
Query: 628 H--EICQPP-IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGA 684
C ++HR+ K N+ A+ ++D GLA + G + H + Y A
Sbjct: 115 QGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR--AFGVPVRTYXHEVVTLWYRA 172
Query: 685 PEFESG--IYTCQSDVYSFGVVMLELLTGRKSY 715
PE G Y+ D++S G + E++T R +
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF 205
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 117/275 (42%), Gaps = 30/275 (10%)
Query: 511 FSQENLIGAGMLGSVYRAQLPDGK-LLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
F++ + IG G G VY+ K ++A+K +D + + +D E + + + I
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQE-ITVLSQCDSPYI 79
Query: 570 VELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
G + + +I EY G+ D+L + ++ T +R L + L+YLH
Sbjct: 80 TRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIA--TILREIL---KGLDYLHS 134
Query: 630 ICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FE 688
+ +HR+ K+AN+ V ++D G+A ++ + + + + APE +
Sbjct: 135 ERK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKR--NXFVGTPFWMAPEVIK 189
Query: 689 SGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSL 748
Y ++D++S G+ +EL G FL+ P P+L
Sbjct: 190 QSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSP-------------PTL 236
Query: 749 SGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQ 783
GQ+ F + + C+ +P FRP E+++
Sbjct: 237 EGQHSKP----FKEFVEACLNKDPRFRPTAKELLK 267
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 87/203 (42%), Gaps = 18/203 (8%)
Query: 517 IGAGMLGSVYRAQL--PDGKLL--AVKKLDKRASSQ-QKDDEFLELVNNIDRIRHANIVE 571
+G G G V R + P GK + AVK L SQ + D+F+ VN + + H N++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 572 LKGYCAEHGQRLLIYEYCSNGTLQDML--HSDDELKNNLSWNTRIRMALGAARALEYLHE 629
L G + ++ E G+L D L H L LS R A+ A + YL
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLS-----RYAVQVAEGMGYLE- 128
Query: 630 ICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA-PLISSGSVSQLSGHLLTAYGYGAPE-F 687
+HR+ + N+ V + D GL L + + H + + APE
Sbjct: 129 --SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESL 186
Query: 688 ESGIYTCQSDVYSFGVVMLELLT 710
++ ++ SD + FGV + E+ T
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFT 209
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 87/203 (42%), Gaps = 18/203 (8%)
Query: 517 IGAGMLGSVYRAQL--PDGKLL--AVKKLDKRASSQ-QKDDEFLELVNNIDRIRHANIVE 571
+G G G V R + P GK + AVK L SQ + D+F+ VN + + H N++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 572 LKGYCAEHGQRLLIYEYCSNGTLQDML--HSDDELKNNLSWNTRIRMALGAARALEYLHE 629
L G + ++ E G+L D L H L LS R A+ A + YL
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLS-----RYAVQVAEGMGYLE- 132
Query: 630 ICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA-PLISSGSVSQLSGHLLTAYGYGAPE-F 687
+HR+ + N+ V + D GL L + + H + + APE
Sbjct: 133 --SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 190
Query: 688 ESGIYTCQSDVYSFGVVMLELLT 710
++ ++ SD + FGV + E+ T
Sbjct: 191 KTRTFSHASDTWMFGVTLWEMFT 213
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 91/206 (44%), Gaps = 14/206 (6%)
Query: 515 NLIGAGMLGSVYRAQLP-DGKLLAVKKLDK-RASSQQKDDEFLELVNNIDRIRHANIVEL 572
+ +G G G V + G +AVK L++ + S + + N+ RH +I++L
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL 81
Query: 573 KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQ 632
+ ++ EY S G L D + + L S R+ ++Y H +
Sbjct: 82 YQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESR----RLFQQILSGVDYCH---R 134
Query: 633 PPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG-I 691
+VHR+ K N+ ++D GL+ ++S G + S + Y APE SG +
Sbjct: 135 HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXS---CGSPNYAAPEVISGRL 191
Query: 692 YTC-QSDVYSFGVVMLELLTGRKSYD 716
Y + D++S GV++ LL G +D
Sbjct: 192 YAGPEVDIWSSGVILYALLCGTLPFD 217
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 94/221 (42%), Gaps = 23/221 (10%)
Query: 504 LQQYTNSFSQENL-----IGAGMLGSVYRAQL--PDGKLL--AVKKLDKRASSQ-QKDDE 553
LQ T +++L +G G G V R + P GK + AVK L SQ + D+
Sbjct: 8 LQSLTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDD 67
Query: 554 FLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDML--HSDDELKNNLSWN 611
F+ VN + + H N++ L G + ++ E G+L D L H L LS
Sbjct: 68 FIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLS-- 124
Query: 612 TRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA-PLISSGSVS 670
R A+ A + YL +HR+ + N+ V + D GL L +
Sbjct: 125 ---RYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHY 178
Query: 671 QLSGHLLTAYGYGAPE-FESGIYTCQSDVYSFGVVMLELLT 710
+ H + + APE ++ ++ SD + FGV + E+ T
Sbjct: 179 VMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 98/228 (42%), Gaps = 31/228 (13%)
Query: 501 IASLQQYT-NSFSQENLIGAGMLGSVYRAQLPDGK-LLAVK-----KLDKRASSQQKDDE 553
+ S +Q+T F +G G G+VY A+ K +LA+K +L+K Q E
Sbjct: 3 LGSKRQWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRRE 62
Query: 554 FLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGT----LQDMLHSDDELKNNLS 609
V +RH NI+ L GY + + LI EY GT LQ + D++ +
Sbjct: 63 ----VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQ--RTAT 116
Query: 610 WNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSV 669
+ T + A AL Y H ++HR+ K N+ + ++D G + S
Sbjct: 117 YITEL------ANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR 167
Query: 670 SQLSGHLLTAYGYGAPE-FESGIYTCQSDVYSFGVVMLELLTGRKSYD 716
L G L Y PE E ++ + D++S GV+ E L G ++
Sbjct: 168 DTLCGTL----DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 90/202 (44%), Gaps = 16/202 (7%)
Query: 515 NLIGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELK 573
+++G G V A+ KL+A+K + K+A + K+ + + +I+H NIV L
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKKAL-EGKEGSMENEIAVLHKIKHPNIVALD 82
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
G LI + S G L D + K + R+ A++YLH++
Sbjct: 83 DIYESGGHLYLIMQLVSGGELFDRIVE----KGFYTERDASRLIFQVLDAVKYLHDLG-- 136
Query: 634 PIVHRNFKSANIXXXXX---XAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FES 689
IVHR+ K N+ + +SD GL+ + GSV LS T GY APE
Sbjct: 137 -IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV--LSTACGTP-GYVAPEVLAQ 192
Query: 690 GIYTCQSDVYSFGVVMLELLTG 711
Y+ D +S GV+ LL G
Sbjct: 193 KPYSKAVDCWSIGVIAYILLCG 214
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 94/219 (42%), Gaps = 40/219 (18%)
Query: 530 LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRI-RHANIVELKGYC-----AEHGQRL 583
L DG A+K++ +Q+D E + ++ R+ H NI+ L YC A+H L
Sbjct: 51 LHDGHFYALKRI---LCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL 107
Query: 584 LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSA 643
L+ + GTL + + + N L+ + + + LG R LE +H HR+ K
Sbjct: 108 LL-PFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHA---KGYAHRDLKPT 163
Query: 644 NIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHL------LT---------AYGYGAPEFE 688
NI + D G L+ GS++Q H+ LT Y APE
Sbjct: 164 NIL--------LGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELF 215
Query: 689 SGIYTC----QSDVYSFGVVMLELLTGRKSYDRTRNRGE 723
S C ++DV+S G V+ ++ G YD +G+
Sbjct: 216 SVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGD 254
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 87/203 (42%), Gaps = 18/203 (8%)
Query: 517 IGAGMLGSVYRAQL--PDGKLL--AVKKLDKRASSQ-QKDDEFLELVNNIDRIRHANIVE 571
+G G G V R + P GK + AVK L SQ + D+F+ VN + + H N++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 572 LKGYCAEHGQRLLIYEYCSNGTLQDML--HSDDELKNNLSWNTRIRMALGAARALEYLHE 629
L G + ++ E G+L D L H L LS R A+ A + YL
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLS-----RYAVQVAEGMGYLE- 128
Query: 630 ICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA-PLISSGSVSQLSGHLLTAYGYGAPE-F 687
+HR+ + N+ V + D GL L + + H + + APE
Sbjct: 129 --SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 186
Query: 688 ESGIYTCQSDVYSFGVVMLELLT 710
++ ++ SD + FGV + E+ T
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFT 209
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 87/203 (42%), Gaps = 18/203 (8%)
Query: 517 IGAGMLGSVYRAQL--PDGKLL--AVKKLDKRASSQ-QKDDEFLELVNNIDRIRHANIVE 571
+G G G V R + P GK + AVK L SQ + D+F+ VN + + H N++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 572 LKGYCAEHGQRLLIYEYCSNGTLQDML--HSDDELKNNLSWNTRIRMALGAARALEYLHE 629
L G + ++ E G+L D L H L LS R A+ A + YL
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLS-----RYAVQVAEGMGYLE- 132
Query: 630 ICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA-PLISSGSVSQLSGHLLTAYGYGAPE-F 687
+HR+ + N+ V + D GL L + + H + + APE
Sbjct: 133 --SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 190
Query: 688 ESGIYTCQSDVYSFGVVMLELLT 710
++ ++ SD + FGV + E+ T
Sbjct: 191 KTRTFSHASDTWMFGVTLWEMFT 213
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 87/203 (42%), Gaps = 18/203 (8%)
Query: 517 IGAGMLGSVYRAQL--PDGKLL--AVKKLDKRASSQ-QKDDEFLELVNNIDRIRHANIVE 571
+G G G V R + P GK + AVK L SQ + D+F+ VN + + H N++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 572 LKGYCAEHGQRLLIYEYCSNGTLQDML--HSDDELKNNLSWNTRIRMALGAARALEYLHE 629
L G + ++ E G+L D L H L LS R A+ A + YL
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLS-----RYAVQVAEGMGYLE- 128
Query: 630 ICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA-PLISSGSVSQLSGHLLTAYGYGAPE-F 687
+HR+ + N+ V + D GL L + + H + + APE
Sbjct: 129 --SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 186
Query: 688 ESGIYTCQSDVYSFGVVMLELLT 710
++ ++ SD + FGV + E+ T
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 119/277 (42%), Gaps = 34/277 (12%)
Query: 511 FSQENLIGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
F++ IG G G V++ +++A+K +D + + +D E + + + + +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQE-ITVLSQCDSSYV 83
Query: 570 VELKGYCAEHGQRLLIYEYCSNGTLQDMLHSD--DELKNNLSWNTRIRMALGAARALEYL 627
+ G + + +I EY G+ D+L + DE + T ++ L + L+YL
Sbjct: 84 TKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQ----IATMLKEIL---KGLDYL 136
Query: 628 HEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE- 686
H + +HR+ K+AN+ V ++D G+A ++ + + + + APE
Sbjct: 137 HSEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKR--NTFVGTPFWMAPEV 191
Query: 687 FESGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDP 746
+ Y ++D++S G+ +EL G FL+ P P
Sbjct: 192 IQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNP-------------P 238
Query: 747 SLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQ 783
+L G + KS F D C+ +P FRP E+++
Sbjct: 239 TLVGDF-TKSFKEFID---ACLNKDPSFRPTAKELLK 271
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 98/228 (42%), Gaps = 16/228 (7%)
Query: 511 FSQENLIGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNI-DRIRHAN 568
F ++G G +V A +L + A+K L+KR ++ ++ ++ R+ H
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 98
Query: 569 IVELKGYCAEHGQRLLI-YEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
V+L +C + ++L Y NG L + TR A ALEYL
Sbjct: 99 FVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC---TRFYTA-EIVSALEYL 153
Query: 628 HEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEF 687
H I+HR+ K NI + ++D G A ++S S + + Y +PE
Sbjct: 154 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 210
Query: 688 ESGIYTCQ-SDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQL 734
+ C+ SD+++ G ++ +L+ G + G ++L+ I +L
Sbjct: 211 LTEKSACKSSDLWALGCIIYQLVAGLPPF----RAGNEYLIFQKIIKL 254
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/279 (20%), Positives = 115/279 (41%), Gaps = 35/279 (12%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
+ F + + +GAG G V++ L+ +KL ++ + + +
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 68
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
IV G G+ + E+ G+L +L + + ++++ + L YL
Sbjct: 69 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG----KVSIAVIKGLTYLR 124
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFE 688
E + I+HR+ K +NI + + D G +S + +++ + Y +PE
Sbjct: 125 E--KHKIMHRDVKPSNILVNSRGEIKLCDFG----VSGQLIDEMANEFVGTRSYMSPERL 178
Query: 689 SGI-YTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVD-- 745
G Y+ QSD++S G+ ++E+ GR Y R P + + L +V+
Sbjct: 179 QGTHYSVQSDIWSMGLSLVEMAVGR--YPR--------------PPMAIFELLDYIVNEP 222
Query: 746 -PSLSGQYPAKSLS-HFADIISRCVQSEPEFRPPMSEVV 782
P L P+ S F D +++C+ P R + +++
Sbjct: 223 PPKL----PSAVFSLEFQDFVNKCLIKNPAERADLKQLM 257
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 118/294 (40%), Gaps = 52/294 (17%)
Query: 517 IGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQK-----DDEFLELVNNIDRIRHANIV 570
+G G G V+ + +G+ A+K L K + K +DE L L + H I+
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLML----SIVTHPFII 69
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
+ G + Q +I +Y G L +L N ++ + L ALEYLH
Sbjct: 70 RMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCL----ALEYLH-- 123
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG 690
I++R+ K NI + ++D G A V ++ L Y APE S
Sbjct: 124 -SKDIIYRDLKPENILLDKNGHIKITDFGFA-----KYVPDVTYXLCGTPDYIAPEVVST 177
Query: 691 I-YTCQSDVYSFGVVMLELLTGR---------KSYDRTRNRGEQFLVRWAIPQLHDIDA- 739
Y D +SFG+++ E+L G K+Y++ N +F P + D
Sbjct: 178 KPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRF------PPFFNEDVK 231
Query: 740 --LSRMVDPSLS--------GQYPAKSLSHFADIISRCVQS---EPEFRPPMSE 780
LSR++ LS G K+ F +++ + S E + PP+ +
Sbjct: 232 DLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVWEKLLSRNIETPYEPPIQQ 285
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 93/215 (43%), Gaps = 25/215 (11%)
Query: 508 TNSFSQENLIGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDEF-----LELVNNI 561
T+ + IG G G+VY+A+ P G +A+K + R + ++ + L+ +
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSV--RVPNGEEGLPISTVREVALLRRL 60
Query: 562 DRIRHANIVELKGYCA-----EHGQRLLIYEYCSNGTLQDM-LHSDDELKNNLSWNTRIR 615
+ H N+V L CA + L++E+ QD+ + D L T
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD----QDLRTYLDKAPPPGLPAETIKD 116
Query: 616 MALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGH 675
+ R L++LH C IVHR+ K NI V ++D GLA + S L+
Sbjct: 117 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA--LAPV 171
Query: 676 LLTAYGYGAPE-FESGIYTCQSDVYSFGVVMLELL 709
++T + Y APE Y D++S G + E+
Sbjct: 172 VVTLW-YRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 89/224 (39%), Gaps = 44/224 (19%)
Query: 516 LIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRI---RHANIVEL 572
LIG G G+VY+ L D + +AVK A+ Q +E NI R+ H NI
Sbjct: 20 LIGRGRYGAVYKGSL-DERPVAVKVF-SFANRQNFINE-----KNIYRVPLMEHDNIARF 72
Query: 573 -----KGYCAEHGQRLLIYEYCSNGTLQDML--HSDDELKNNLSWNTRIRMALGAARALE 625
+ + LL+ EY NG+L L H+ D W + R+A R L
Sbjct: 73 IVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSD-------WVSSCRLAHSVTRGLA 125
Query: 626 YLH------EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA------PLISSGSVSQLS 673
YLH + +P I HR+ S N+ +SD GL+ L+ G +
Sbjct: 126 YLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAA 185
Query: 674 GHLLTAYGYGAPEFESGIYTC--------QSDVYSFGVVMLELL 709
+ Y APE G Q D+Y+ G++ E+
Sbjct: 186 ISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 80/201 (39%), Gaps = 15/201 (7%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
+G+G G V+ + L V K + SQ ++ + + + H NI+++
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF 89
Query: 577 AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIV 636
++ ++ E C G L + + S LS + AL Y H +V
Sbjct: 90 EDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH---SQHVV 146
Query: 637 HRNFKSANIXXXXX---XAVSVSDCGLAPLISSGSVSQLSGHLLTAYG---YGAPEFESG 690
H++ K NI + + D GLA L S H A G Y APE
Sbjct: 147 HKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE------HSTNAAGTALYMAPEVFKR 200
Query: 691 IYTCQSDVYSFGVVMLELLTG 711
T + D++S GVVM LLTG
Sbjct: 201 DVTFKCDIWSAGVVMYFLLTG 221
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 88/200 (44%), Gaps = 14/200 (7%)
Query: 516 LIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKG 574
++G G G V + + + AVK ++K ++ + L V + ++ H NI++L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 575 YCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPP 634
+ ++ E + G L D + + S + R+ + Y+H +
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIK----RKRFSEHDAARIIKQVFSGITYMH---KHN 141
Query: 635 IVHRNFKSANIXXXXXXA---VSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESGI 691
IVHR+ K NI + + D GL+ + ++ + TAY Y APE G
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT--KMKDRIGTAY-YIAPEVLRGT 198
Query: 692 YTCQSDVYSFGVVMLELLTG 711
Y + DV+S GV++ LL+G
Sbjct: 199 YDEKCDVWSAGVILYILLSG 218
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 89/202 (44%), Gaps = 16/202 (7%)
Query: 515 NLIGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELK 573
+++G G V A+ KL+A+K + K A + K+ + + +I+H NIV L
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEAL-EGKEGSMENEIAVLHKIKHPNIVALD 82
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
G LI + S G L D + K + R+ A++YLH++
Sbjct: 83 DIYESGGHLYLIMQLVSGGELFDRIVE----KGFYTERDASRLIFQVLDAVKYLHDL--- 135
Query: 634 PIVHRNFKSANIXXXXX---XAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FES 689
IVHR+ K N+ + +SD GL+ + GSV LS T GY APE
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV--LSTACGTP-GYVAPEVLAQ 192
Query: 690 GIYTCQSDVYSFGVVMLELLTG 711
Y+ D +S GV+ LL G
Sbjct: 193 KPYSKAVDCWSIGVIAYILLCG 214
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 89/202 (44%), Gaps = 16/202 (7%)
Query: 515 NLIGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELK 573
+++G G V A+ KL+A+K + K A + K+ + + +I+H NIV L
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEAL-EGKEGSMENEIAVLHKIKHPNIVALD 82
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
G LI + S G L D + K + R+ A++YLH++
Sbjct: 83 DIYESGGHLYLIMQLVSGGELFDRIVE----KGFYTERDASRLIFQVLDAVKYLHDL--- 135
Query: 634 PIVHRNFKSANIXXXXX---XAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FES 689
IVHR+ K N+ + +SD GL+ + GSV LS T GY APE
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV--LSTACGTP-GYVAPEVLAQ 192
Query: 690 GIYTCQSDVYSFGVVMLELLTG 711
Y+ D +S GV+ LL G
Sbjct: 193 KPYSKAVDCWSIGVIAYILLCG 214
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 98/226 (43%), Gaps = 38/226 (16%)
Query: 505 QQYTNSFSQENLIGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDEFLELVNNIDR 563
+++ F + LIG+G G V++A+ DGK +K++ +++ V + +
Sbjct: 7 KRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAERE------VKALAK 60
Query: 564 IRHANIVELKG------YCAEHGQR----------LLIYEYCSNGTLQDMLHS--DDELK 605
+ H NIV G Y E + + E+C GTL+ + ++L
Sbjct: 61 LDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLD 120
Query: 606 NNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAP-LI 664
L+ + + + ++Y+H +++R+ K +NI V + D GL L
Sbjct: 121 KVLA----LELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLK 173
Query: 665 SSGSVSQLSGHLLTAYGYGAPE-FESGIYTCQSDVYSFGVVMLELL 709
+ G + G L Y +PE S Y + D+Y+ G+++ ELL
Sbjct: 174 NDGKRXRSKGTLR----YMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 68/142 (47%), Gaps = 5/142 (3%)
Query: 506 QYTNSFSQENLIGAGMLGSVYR-AQLPDGKLLAVKKLDK-RASSQQKDDEFLELVNNIDR 563
+YT F + IG+G GSV++ + DG + A+K+ K A S + + E+ +
Sbjct: 8 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 67
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+H+++V AE L+ EYC+ G+L D + + + + + L R
Sbjct: 68 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 127
Query: 624 LEYLHEICQPPIVHRNFKSANI 645
L Y+H + +VH + K +NI
Sbjct: 128 LRYIHSMS---LVHMDIKPSNI 146
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 89/202 (44%), Gaps = 16/202 (7%)
Query: 515 NLIGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELK 573
+++G G V A+ KL+A+K + K A + K+ + + +I+H NIV L
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEAL-EGKEGSMENEIAVLHKIKHPNIVALD 82
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
G LI + S G L D + K + R+ A++YLH++
Sbjct: 83 DIYESGGHLYLIMQLVSGGELFDRIVE----KGFYTERDASRLIFQVLDAVKYLHDL--- 135
Query: 634 PIVHRNFKSANIXXXXX---XAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FES 689
IVHR+ K N+ + +SD GL+ + GSV LS T GY APE
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV--LSTACGTP-GYVAPEVLAQ 192
Query: 690 GIYTCQSDVYSFGVVMLELLTG 711
Y+ D +S GV+ LL G
Sbjct: 193 KPYSKAVDCWSIGVIAYILLCG 214
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 91/218 (41%), Gaps = 28/218 (12%)
Query: 508 TNSFSQENLIGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDEFLE--------LV 558
T+ + IG G G+VY+A+ P G +A+K + R + L L+
Sbjct: 8 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSV--RVPNGGGGGGGLPISTVREVALL 65
Query: 559 NNIDRIRHANIVELKGYCA-----EHGQRLLIYEYCSNGTLQDM-LHSDDELKNNLSWNT 612
++ H N+V L CA + L++E+ QD+ + D L T
Sbjct: 66 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD----QDLRTYLDKAPPPGLPAET 121
Query: 613 RIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQL 672
+ R L++LH C IVHR+ K NI V ++D GLA + S L
Sbjct: 122 IKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA--L 176
Query: 673 SGHLLTAYGYGAPE-FESGIYTCQSDVYSFGVVMLELL 709
+ ++T + Y APE Y D++S G + E+
Sbjct: 177 TPVVVTLW-YRAPEVLLQSTYATPVDMWSVGCIFAEMF 213
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 68/142 (47%), Gaps = 5/142 (3%)
Query: 506 QYTNSFSQENLIGAGMLGSVYR-AQLPDGKLLAVKKLDK-RASSQQKDDEFLELVNNIDR 563
+YT F + IG+G GSV++ + DG + A+K+ K A S + + E+ +
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 65
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+H+++V AE L+ EYC+ G+L D + + + + + L R
Sbjct: 66 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 125
Query: 624 LEYLHEICQPPIVHRNFKSANI 645
L Y+H + +VH + K +NI
Sbjct: 126 LRYIHSMS---LVHMDIKPSNI 144
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 68/142 (47%), Gaps = 5/142 (3%)
Query: 506 QYTNSFSQENLIGAGMLGSVYR-AQLPDGKLLAVKKLDK-RASSQQKDDEFLELVNNIDR 563
+YT F + IG+G GSV++ + DG + A+K+ K A S + + E+ +
Sbjct: 4 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 63
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+H+++V AE L+ EYC+ G+L D + + + + + L R
Sbjct: 64 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 123
Query: 624 LEYLHEICQPPIVHRNFKSANI 645
L Y+H + +VH + K +NI
Sbjct: 124 LRYIHSMS---LVHMDIKPSNI 142
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 68/142 (47%), Gaps = 5/142 (3%)
Query: 506 QYTNSFSQENLIGAGMLGSVYR-AQLPDGKLLAVKKLDK-RASSQQKDDEFLELVNNIDR 563
+YT F + IG+G GSV++ + DG + A+K+ K A S + + E+ +
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 65
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
+H+++V AE L+ EYC+ G+L D + + + + + L R
Sbjct: 66 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 125
Query: 624 LEYLHEICQPPIVHRNFKSANI 645
L Y+H + +VH + K +NI
Sbjct: 126 LRYIHSMS---LVHMDIKPSNI 144
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 94/214 (43%), Gaps = 35/214 (16%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
+G G G V+R G+ +AVK R + EL N + +RH NI+ G+
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRET--ELYNTV-MLRHENIL---GFI 68
Query: 577 AE-------HGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH- 628
A Q LI Y G+L D L L + +R+ L A L +LH
Sbjct: 69 ASDMTSRHSSTQLWLITHYHEMGSLYDYLQL-----TTLDTVSCLRIVLSIASGLAHLHI 123
Query: 629 EIC----QPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQL---SGHLLTAYG 681
EI +P I HR+ KS NI ++D GLA ++ S S +QL + +
Sbjct: 124 EIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVGTKR 182
Query: 682 YGAPEF--ESGIYTC-----QSDVYSFGVVMLEL 708
Y APE E+ C + D+++FG+V+ E+
Sbjct: 183 YMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 92/215 (42%), Gaps = 25/215 (11%)
Query: 508 TNSFSQENLIGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDEF-----LELVNNI 561
T+ + IG G G+VY+A+ P G +A+K + R + ++ + L+ +
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSV--RVPNGEEGLPISTVREVALLRRL 60
Query: 562 DRIRHANIVELKGYCA-----EHGQRLLIYEYCSNGTLQDM-LHSDDELKNNLSWNTRIR 615
+ H N+V L CA + L++E+ QD+ + D L T
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD----QDLRTYLDKAPPPGLPAETIKD 116
Query: 616 MALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGH 675
+ R L++LH C IVHR+ K NI V ++D GLA + S L
Sbjct: 117 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA--LDPV 171
Query: 676 LLTAYGYGAPE-FESGIYTCQSDVYSFGVVMLELL 709
++T + Y APE Y D++S G + E+
Sbjct: 172 VVTLW-YRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 89/206 (43%), Gaps = 16/206 (7%)
Query: 511 FSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
F + +G G V A+ GKL AVK + K+A + K+ + + +I+H NI
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKAL-KGKESSIENEIAVLRKIKHENI 82
Query: 570 VELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHE 629
V L+ L+ + S G L D + + +T IR L A+ YLH
Sbjct: 83 VALEDIYESPNHLYLVMQLVSGGELFDRI-VEKGFYTEKDASTLIRQVLD---AVYYLHR 138
Query: 630 ICQPPIVHRNFKSANI---XXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE 686
+ IVHR+ K N+ + +SD GL+ + G V +S T GY APE
Sbjct: 139 M---GIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDV--MSTACGTP-GYVAPE 192
Query: 687 -FESGIYTCQSDVYSFGVVMLELLTG 711
Y+ D +S GV+ LL G
Sbjct: 193 VLAQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 103/219 (47%), Gaps = 36/219 (16%)
Query: 509 NSFSQENLIGAGMLGSVYRAQL---PDGKLLAVKKLDKRASSQQKDDEFLELVNNI-DRI 564
+ F ++G G G V+ + D + L K+ K+A+ + +D ++ +I +
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 565 RHANIVELKGYCAEHGQRLLIYEYCSNGTL-----QDMLHSDDELKNNLSWNTRIRMALG 619
H IV+L G+ LI ++ G L ++++ +++++K L+ +AL
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA-----ELAL- 137
Query: 620 AARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTA 679
AL++LH + I++R+ K NI + ++D GL S S+ H A
Sbjct: 138 ---ALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGL----SKESID----HEKKA 183
Query: 680 YG------YGAPEFESGI-YTCQSDVYSFGVVMLELLTG 711
Y Y APE + +T +D +SFGV+M E+LTG
Sbjct: 184 YSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 108/272 (39%), Gaps = 27/272 (9%)
Query: 511 FSQENLIGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNI-DRIRHAN 568
F ++G G +V A +L + A+K L+KR ++ ++ ++ R+ H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
V+L + + Y NG L + TR A ALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC---TRFYTA-EIVSALEYLH 149
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFE 688
I+HR+ K NI + ++D G A ++S S + + Y +PE
Sbjct: 150 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 689 SGIYTCQ-SDVYSFGVVMLELLTGRKSYDRTRNRG--------------EQFL--VRWAI 731
+ C+ SD+++ G ++ +L+ G + R N G E+F R +
Sbjct: 207 TEKSACKSSDLWALGCIIYQLVAGLPPF-RAGNEGLIFAKIIKLEYDFPEKFFPKARDLV 265
Query: 732 PQLHDIDALSRMVDPSLSGQYPAKSLSHFADI 763
+L +DA R+ + G P K+ F +
Sbjct: 266 EKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 297
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 94/214 (43%), Gaps = 35/214 (16%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
+G G G V+R G+ +AVK R + EL N + +RH NI+ G+
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRET--ELYNTV-MLRHENIL---GFI 68
Query: 577 AE-------HGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH- 628
A Q LI Y G+L D L L + +R+ L A L +LH
Sbjct: 69 ASDMTSRHSSTQLWLITHYHEMGSLYDYLQL-----TTLDTVSCLRIVLSIASGLAHLHI 123
Query: 629 EIC----QPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQL---SGHLLTAYG 681
EI +P I HR+ KS NI ++D GLA ++ S S +QL + +
Sbjct: 124 EIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVGTKR 182
Query: 682 YGAPEF--ESGIYTC-----QSDVYSFGVVMLEL 708
Y APE E+ C + D+++FG+V+ E+
Sbjct: 183 YMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 94/214 (43%), Gaps = 35/214 (16%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC 576
+G G G V+R G+ +AVK R + EL N + +RH NI+ G+
Sbjct: 45 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRET--ELYNTV-MLRHENIL---GFI 97
Query: 577 AE-------HGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH- 628
A Q LI Y G+L D L L + +R+ L A L +LH
Sbjct: 98 ASDMTSRHSSTQLWLITHYHEMGSLYDYLQ-----LTTLDTVSCLRIVLSIASGLAHLHI 152
Query: 629 EIC----QPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQL---SGHLLTAYG 681
EI +P I HR+ KS NI ++D GLA ++ S S +QL + +
Sbjct: 153 EIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVGTKR 211
Query: 682 YGAPEF--ESGIYTC-----QSDVYSFGVVMLEL 708
Y APE E+ C + D+++FG+V+ E+
Sbjct: 212 YMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 92/205 (44%), Gaps = 16/205 (7%)
Query: 517 IGAGMLGSVY--RAQLPDGKLLAVKKLDK-RASSQQKDDEFLELVNNIDRIRHANIVELK 573
+G G G V QL G +AVK L++ + S + + N+ RH +I++L
Sbjct: 19 LGVGTFGKVKIGEHQLT-GHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLY 77
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
+ ++ EY S G L D + ++ R R+ A++Y H +
Sbjct: 78 QVISTPTDFFMVMEYVSGGELFDYICKHGRVEE---MEAR-RLFQQILSAVDYCH---RH 130
Query: 634 PIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG-IY 692
+VHR+ K N+ ++D GL+ ++S G + S + Y APE SG +Y
Sbjct: 131 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS---CGSPNYAAPEVISGRLY 187
Query: 693 TC-QSDVYSFGVVMLELLTGRKSYD 716
+ D++S GV++ LL G +D
Sbjct: 188 AGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 88/200 (44%), Gaps = 14/200 (7%)
Query: 516 LIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKG 574
++G G G V + + + AVK ++K ++ + L V + ++ H NI++L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 575 YCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPP 634
+ ++ E + G L D + + S + R+ + Y+H +
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIK----RKRFSEHDAARIIKQVFSGITYMH---KHN 141
Query: 635 IVHRNFKSANIXXXXXXA---VSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESGI 691
IVHR+ K NI + + D GL+ + ++ + TAY Y APE G
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT--KMKDRIGTAY-YIAPEVLRGT 198
Query: 692 YTCQSDVYSFGVVMLELLTG 711
Y + DV+S GV++ LL+G
Sbjct: 199 YDEKCDVWSAGVILYILLSG 218
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 87/205 (42%), Gaps = 11/205 (5%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
+ F + + +GAG G V++ L+ +KL ++ + + +
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 127
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
IV G G+ + E+ G+L +L + + ++++ + L YL
Sbjct: 128 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG----KVSIAVIKGLTYLR 183
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFE 688
E + I+HR+ K +NI + + D G +S + ++ + Y +PE
Sbjct: 184 E--KHKIMHRDVKPSNILVNSRGEIKLCDFG----VSGQLIDSMANSFVGTRSYMSPERL 237
Query: 689 SGI-YTCQSDVYSFGVVMLELLTGR 712
G Y+ QSD++S G+ ++E+ GR
Sbjct: 238 QGTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 87/205 (42%), Gaps = 11/205 (5%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
+ F + + +GAG G V++ L+ +KL ++ + + +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
IV G G+ + E+ G+L +L + + ++++ + L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG----KVSIAVIKGLTYLR 121
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFE 688
E + I+HR+ K +NI + + D G +S + ++ + Y +PE
Sbjct: 122 E--KHKIMHRDVKPSNILVNSRGEIKLCDFG----VSGQLIDSMANSFVGTRSYMSPERL 175
Query: 689 SGI-YTCQSDVYSFGVVMLELLTGR 712
G Y+ QSD++S G+ ++E+ GR
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 88/200 (44%), Gaps = 14/200 (7%)
Query: 516 LIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKG 574
++G G G V + + + AVK ++K ++ + L V + ++ H NI++L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 575 YCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPP 634
+ ++ E + G L D + + S + R+ + Y+H +
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIK----RKRFSEHDAARIIKQVFSGITYMH---KHN 141
Query: 635 IVHRNFKSANIXXXXXXA---VSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESGI 691
IVHR+ K NI + + D GL+ + ++ + TAY Y APE G
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT--KMKDRIGTAY-YIAPEVLRGT 198
Query: 692 YTCQSDVYSFGVVMLELLTG 711
Y + DV+S GV++ LL+G
Sbjct: 199 YDEKCDVWSAGVILYILLSG 218
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 92/215 (42%), Gaps = 25/215 (11%)
Query: 508 TNSFSQENLIGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDEF-----LELVNNI 561
T+ + IG G G+VY+A+ P G +A+K + R + ++ + L+ +
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSV--RVPNGEEGLPISTVREVALLRRL 60
Query: 562 DRIRHANIVELKGYCA-----EHGQRLLIYEYCSNGTLQDM-LHSDDELKNNLSWNTRIR 615
+ H N+V L CA + L++E+ QD+ + D L T
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD----QDLRTYLDKAPPPGLPAETIKD 116
Query: 616 MALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGH 675
+ R L++LH C IVHR+ K NI V ++D GLA + S L
Sbjct: 117 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA--LFPV 171
Query: 676 LLTAYGYGAPE-FESGIYTCQSDVYSFGVVMLELL 709
++T + Y APE Y D++S G + E+
Sbjct: 172 VVTLW-YRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 92/212 (43%), Gaps = 24/212 (11%)
Query: 511 FSQENLIGAGMLGSVYRAQ----LPDGKLLAVKKLDKRASSQQ-KDDEFLELVNNI-DRI 564
F ++G G G V++ + GK+ A+K L K + KD + NI + +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 565 RHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLS--WNTRIRMALGAAR 622
+H IV+L G+ LI EY S G L L + + + + I MALG
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALG--- 135
Query: 623 ALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAP-LISSGSVSQLSGHLLTAYG 681
+LH Q I++R+ K NI V ++D GL I G+V+
Sbjct: 136 ---HLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHT---FCGTIE 186
Query: 682 YGAPE--FESGIYTCQSDVYSFGVVMLELLTG 711
Y APE SG + D +S G +M ++LTG
Sbjct: 187 YMAPEILMRSG-HNRAVDWWSLGALMYDMLTG 217
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 99/236 (41%), Gaps = 30/236 (12%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPD-GKLLAVKKLDKRASSQQKDDEF-------LELVNN 560
N FS +IG G G VY + D GK+ A+K LDK+ ++ + L LV+
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 561 IDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWN---TRIRMA 617
D + Y +L + D+++ D L +LS + + M
Sbjct: 249 GD----CPFIVCMSYAFHTPDKL--------SFILDLMNGGD-LHYHLSQHGVFSEADMR 295
Query: 618 LGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLL 677
AA + L + +V+R+ K ANI V +SD GLA S G
Sbjct: 296 FYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVG--- 352
Query: 678 TAYGYGAPE-FESGI-YTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAI 731
+GY APE + G+ Y +D +S G ++ +LL G + + + + + + R +
Sbjct: 353 -THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL 407
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 103/220 (46%), Gaps = 38/220 (17%)
Query: 509 NSFSQENLIGAGMLGSVYRAQL---PDGKLLAVKKLDKRASSQQKDDEFLELVNNI-DRI 564
+ F ++G G G V+ + D + L K+ K+A+ + +D ++ +I +
Sbjct: 25 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 84
Query: 565 RHANIVELKGYCAEHGQRLLIYEYCSNGTL-----QDMLHSDDELKNNLSWNTRIRMALG 619
H IV+L G+ LI ++ G L ++++ +++++K L+ +AL
Sbjct: 85 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA-----ELAL- 138
Query: 620 AARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTA 679
AL++LH + I++R+ K NI + ++D GL S S+ H A
Sbjct: 139 ---ALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGL----SKESID----HEKKA 184
Query: 680 YG------YGAPEF--ESGIYTCQSDVYSFGVVMLELLTG 711
Y Y APE G +T +D +SFGV+M E+LTG
Sbjct: 185 YSFCGTVEYMAPEVVNRRG-HTQSADWWSFGVLMFEMLTG 223
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 99/236 (41%), Gaps = 30/236 (12%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPD-GKLLAVKKLDKRASSQQKDDEF-------LELVNN 560
N FS +IG G G VY + D GK+ A+K LDK+ ++ + L LV+
Sbjct: 188 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 247
Query: 561 IDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWN---TRIRMA 617
D + Y +L + D+++ D L +LS + + M
Sbjct: 248 GD----CPFIVCMSYAFHTPDKL--------SFILDLMNGGD-LHYHLSQHGVFSEADMR 294
Query: 618 LGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLL 677
AA + L + +V+R+ K ANI V +SD GLA S G
Sbjct: 295 FYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVG--- 351
Query: 678 TAYGYGAPE-FESGI-YTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAI 731
+GY APE + G+ Y +D +S G ++ +LL G + + + + + + R +
Sbjct: 352 -THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL 406
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 112/253 (44%), Gaps = 41/253 (16%)
Query: 509 NSFSQENLIGAGMLGSVY---RAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNI-DRI 564
+ F ++G G G V+ + PD L K+ K+A+ + +D ++ +I +
Sbjct: 28 SHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADV 87
Query: 565 RHANIVELKGYCAEHGQRLLIYEYCSNGTL-----QDMLHSDDELKNNLSWNTRIRMALG 619
H +V+L G+ LI ++ G L ++++ +++++K L+ +ALG
Sbjct: 88 NHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA-----ELALG 142
Query: 620 AARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTA 679
L++LH + I++R+ K NI + ++D GL+ + H A
Sbjct: 143 ----LDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLS--------KEAIDHEKKA 187
Query: 680 YG------YGAPEF--ESGIYTCQSDVYSFGVVMLELLTGRKSY---DRTRNRGEQFLVR 728
Y Y APE G ++ +D +S+GV+M E+LTG + DR +
Sbjct: 188 YSFCGTVEYMAPEVVNRQG-HSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAK 246
Query: 729 WAIPQLHDIDALS 741
+PQ +A S
Sbjct: 247 LGMPQFLSTEAQS 259
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 103/220 (46%), Gaps = 38/220 (17%)
Query: 509 NSFSQENLIGAGMLGSVYRAQL---PDGKLLAVKKLDKRASSQQKDDEFLELVNNI-DRI 564
+ F ++G G G V+ + D + L K+ K+A+ + +D ++ +I +
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 565 RHANIVELKGYCAEHGQRLLIYEYCSNGTL-----QDMLHSDDELKNNLSWNTRIRMALG 619
H IV+L G+ LI ++ G L ++++ +++++K L+ +AL
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA-----ELAL- 137
Query: 620 AARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTA 679
AL++LH + I++R+ K NI + ++D GL S S+ H A
Sbjct: 138 ---ALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGL----SKESID----HEKKA 183
Query: 680 YG------YGAPEF--ESGIYTCQSDVYSFGVVMLELLTG 711
Y Y APE G +T +D +SFGV+M E+LTG
Sbjct: 184 YSFCGTVEYMAPEVVNRRG-HTQSADWWSFGVLMFEMLTG 222
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 99/236 (41%), Gaps = 30/236 (12%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPD-GKLLAVKKLDKRASSQQKDDEF-------LELVNN 560
N FS +IG G G VY + D GK+ A+K LDK+ ++ + L LV+
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 561 IDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWN---TRIRMA 617
D + Y +L + D+++ D L +LS + + M
Sbjct: 249 GD----CPFIVCMSYAFHTPDKL--------SFILDLMNGGD-LHYHLSQHGVFSEADMR 295
Query: 618 LGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLL 677
AA + L + +V+R+ K ANI V +SD GLA S G
Sbjct: 296 FYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVG--- 352
Query: 678 TAYGYGAPE-FESGI-YTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAI 731
+GY APE + G+ Y +D +S G ++ +LL G + + + + + + R +
Sbjct: 353 -THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL 407
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 121/299 (40%), Gaps = 45/299 (15%)
Query: 489 TAKPFTTARSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQ 548
+ P R FTI + F +G G G+VY A+ + K+ ++ +
Sbjct: 10 SGTPDILTRHFTI-------DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIE 62
Query: 549 QKDDEFLELVNNID---RIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELK 605
++ E +L I+ + H NI+ L Y + + LI EY G L EL+
Sbjct: 63 KEGVEH-QLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELY------KELQ 115
Query: 606 NNLSWNTRIRMAL--GAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPL 663
+ +++ + + A AL Y H ++HR+ K N+ + ++D G +
Sbjct: 116 KSCTFDEQRTATIMEELADALMYCH---GKKVIHRDIKPENLLLGLKGELKIADFGWSVH 172
Query: 664 ISSGSVSQLSGHLLTAYGYGAPE-FESGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRG 722
S + G L Y PE E ++ + D++ GV+ ELL G ++ +
Sbjct: 173 APSLRRKTMCGTL----DYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHN- 227
Query: 723 EQFLVRWAIPQLHDIDALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEV 781
+ R+V L ++PA + D+IS+ ++ P R P+++V
Sbjct: 228 ---------------ETYRRIVKVDL--KFPASVPTGAQDLISKLLRHNPSERLPLAQV 269
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 99/236 (41%), Gaps = 30/236 (12%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPD-GKLLAVKKLDKRASSQQKDDEF-------LELVNN 560
N FS +IG G G VY + D GK+ A+K LDK+ ++ + L LV+
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 561 IDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWN---TRIRMA 617
D + Y +L + D+++ D L +LS + + M
Sbjct: 249 GD----CPFIVCMSYAFHTPDKL--------SFILDLMNGGD-LHYHLSQHGVFSEADMR 295
Query: 618 LGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLL 677
AA + L + +V+R+ K ANI V +SD GLA S G
Sbjct: 296 FYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVG--- 352
Query: 678 TAYGYGAPE-FESGI-YTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAI 731
+GY APE + G+ Y +D +S G ++ +LL G + + + + + + R +
Sbjct: 353 -THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL 407
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 92/212 (43%), Gaps = 24/212 (11%)
Query: 511 FSQENLIGAGMLGSVYRAQ----LPDGKLLAVKKLDKRASSQQ-KDDEFLELVNNI-DRI 564
F ++G G G V++ + GK+ A+K L K + KD + NI + +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 565 RHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLS--WNTRIRMALGAAR 622
+H IV+L G+ LI EY S G L L + + + + I MALG
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALG--- 135
Query: 623 ALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAP-LISSGSVSQLSGHLLTAYG 681
+LH Q I++R+ K NI V ++D GL I G+V+
Sbjct: 136 ---HLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHX---FCGTIE 186
Query: 682 YGAPE--FESGIYTCQSDVYSFGVVMLELLTG 711
Y APE SG + D +S G +M ++LTG
Sbjct: 187 YMAPEILMRSG-HNRAVDWWSLGALMYDMLTG 217
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 87/205 (42%), Gaps = 11/205 (5%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
+ F + + +GAG G V++ L+ +KL ++ + + +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
IV G G+ + E+ G+L +L + + ++++ + L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG----KVSIAVIKGLTYLR 121
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFE 688
E + I+HR+ K +NI + + D G +S + ++ + Y +PE
Sbjct: 122 E--KHKIMHRDVKPSNILVNSRGEIKLCDFG----VSGQLIDSMANSFVGTRSYMSPERL 175
Query: 689 SGI-YTCQSDVYSFGVVMLELLTGR 712
G Y+ QSD++S G+ ++E+ GR
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 87/205 (42%), Gaps = 11/205 (5%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
+ F + + +GAG G V++ L+ +KL ++ + + +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
IV G G+ + E+ G+L +L + + ++++ + L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG----KVSIAVIKGLTYLR 121
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFE 688
E + I+HR+ K +NI + + D G +S + ++ + Y +PE
Sbjct: 122 E--KHKIMHRDVKPSNILVNSRGEIKLCDFG----VSGQLIDSMANSFVGTRSYMSPERL 175
Query: 689 SGI-YTCQSDVYSFGVVMLELLTGR 712
G Y+ QSD++S G+ ++E+ GR
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 91/214 (42%), Gaps = 35/214 (16%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV-----E 571
IG G G V+ + K+ +S ++ E + V +RH NI+ +
Sbjct: 45 IGKGRYGEVWMGKWRGEKVAVKVFFTTEEASWFRETEIYQTV----LMRHENILGFIAAD 100
Query: 572 LKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH-EI 630
+KG Q LI +Y NG+L D L S L + +++A + L +LH EI
Sbjct: 101 IKG-TGSWTQLYLITDYHENGSLYDYLKS-----TTLDAKSMLKLAYSSVSGLCHLHTEI 154
Query: 631 C----QPPIVHRNFKSANIXXXXXXAVSVSDCGLA-PLIS-SGSVSQLSGHLLTAYGYGA 684
+P I HR+ KS NI ++D GLA IS + V + Y
Sbjct: 155 FSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMP 214
Query: 685 PE----------FESGIYTCQSDVYSFGVVMLEL 708
PE F+S I +D+YSFG+++ E+
Sbjct: 215 PEVLDESLNRNHFQSYI---MADMYSFGLILWEV 245
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 87/205 (42%), Gaps = 11/205 (5%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
+ F + + +GAG G V++ L+ +KL ++ + + +
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 92
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
IV G G+ + E+ G+L +L + + ++++ + L YL
Sbjct: 93 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG----KVSIAVIKGLTYLR 148
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFE 688
E + I+HR+ K +NI + + D G +S + ++ + Y +PE
Sbjct: 149 E--KHKIMHRDVKPSNILVNSRGEIKLCDFG----VSGQLIDSMANSFVGTRSYMSPERL 202
Query: 689 SGI-YTCQSDVYSFGVVMLELLTGR 712
G Y+ QSD++S G+ ++E+ GR
Sbjct: 203 QGTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 94/219 (42%), Gaps = 19/219 (8%)
Query: 509 NSFSQENLIGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+F ++G+G V+ Q GKL A+K + K S +D + + +I+H
Sbjct: 9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKK--SPAFRDSSLENEIAVLKKIKHE 66
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
NIV L+ L+ + S G L D + + + + I+ L A + YL
Sbjct: 67 NIVTLEDIYESTTHYYLVMQLVSGGELFDRI-LERGVYTEKDASLVIQQVLSAVK---YL 122
Query: 628 HEICQPPIVHRNFKSANIXXXX---XXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGA 684
HE IVHR+ K N+ + ++D GL+ + +G +S G GY A
Sbjct: 123 HE---NGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACG----TPGYVA 175
Query: 685 PE-FESGIYTCQSDVYSFGVVMLELLTGRKS-YDRTRNR 721
PE Y+ D +S GV+ LL G Y+ T ++
Sbjct: 176 PEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESK 214
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 87/205 (42%), Gaps = 11/205 (5%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
+ F + + +GAG G V++ L+ +KL ++ + + +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
IV G G+ + E+ G+L +L + + ++++ + L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG----KVSIAVIKGLTYLR 121
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFE 688
E + I+HR+ K +NI + + D G +S + ++ + Y +PE
Sbjct: 122 E--KHKIMHRDVKPSNILVNSRGEIKLCDFG----VSGQLIDSMANSFVGTRSYMSPERL 175
Query: 689 SGI-YTCQSDVYSFGVVMLELLTGR 712
G Y+ QSD++S G+ ++E+ GR
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 87/205 (42%), Gaps = 11/205 (5%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
+ F + + +GAG G V++ L+ +KL ++ + + +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
IV G G+ + E+ G+L +L + + ++++ + L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG----KVSIAVIKGLTYLR 121
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFE 688
E + I+HR+ K +NI + + D G +S + ++ + Y +PE
Sbjct: 122 E--KHKIMHRDVKPSNILVNSRGEIKLCDFG----VSGQLIDSMANSFVGTRSYMSPERL 175
Query: 689 SGI-YTCQSDVYSFGVVMLELLTGR 712
G Y+ QSD++S G+ ++E+ GR
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 92/205 (44%), Gaps = 16/205 (7%)
Query: 517 IGAGMLGSVY--RAQLPDGKLLAVKKLDK-RASSQQKDDEFLELVNNIDRIRHANIVELK 573
+G G G V QL G +AVK L++ + S + + N+ RH +I++L
Sbjct: 19 LGVGTFGKVKIGEHQLT-GHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLY 77
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
+ ++ EY S G L D + ++ R R+ A++Y H +
Sbjct: 78 QVISTPTDFFMVMEYVSGGELFDYICKHGRVEE---MEAR-RLFQQILSAVDYCH---RH 130
Query: 634 PIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG-IY 692
+VHR+ K N+ ++D GL+ ++S G + S + Y APE SG +Y
Sbjct: 131 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDS---CGSPNYAAPEVISGRLY 187
Query: 693 TC-QSDVYSFGVVMLELLTGRKSYD 716
+ D++S GV++ LL G +D
Sbjct: 188 AGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 114/276 (41%), Gaps = 25/276 (9%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHAN 568
+ F + + +GAG G V++ L+ +KL ++ + + +
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 84
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
IV G G+ + E+ G+L +L + + ++++ + L YL
Sbjct: 85 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG----KVSIAVIKGLTYLR 140
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFE 688
E + I+HR+ K +NI + + D G +S + ++ + Y +PE
Sbjct: 141 E--KHKIMHRDVKPSNILVNSRGEIKLCDFG----VSGQLIDSMANSFVGTRSYMSPERL 194
Query: 689 SGI-YTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPS 747
G Y+ QSD++S G+ ++E+ GR Y G AI +L +D + P
Sbjct: 195 QGTHYSVQSDIWSMGLSLVEMAVGR--YPIGSGSGSM-----AIFEL--LDYIVNEPPPK 245
Query: 748 LSGQYPAKSLS-HFADIISRCVQSEPEFRPPMSEVV 782
L P+ S F D +++C+ P R + +++
Sbjct: 246 L----PSGVFSLEFQDFVNKCLIKNPAERADLKQLM 277
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 80/192 (41%), Gaps = 21/192 (10%)
Query: 600 SDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCG 659
SD K ++ I + AR +E+L +HR+ + NI V + D G
Sbjct: 188 SDGFYKEPITMEDLISYSFQVARGMEFLS---SRKCIHRDLAARNILLSENNVVKICDFG 244
Query: 660 LAPLISSGSVSQLSGHLLTAYGYGAPE-FESGIYTCQSDVYSFGVVMLELLT-GRKSYDR 717
LA I G + APE IY+ +SDV+S+GV++ E+ + G Y
Sbjct: 245 LARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYP- 303
Query: 718 TRNRGEQFLVRWAIPQLHDIDALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPP 777
G Q D D SR+ + + + P S I+ C +P+ RP
Sbjct: 304 ----GVQM----------DEDFCSRLRE-GMRMRAPEYSTPEIYQIMLDCWHRDPKERPR 348
Query: 778 MSEVVQDLVDMI 789
+E+V+ L D++
Sbjct: 349 FAELVEKLGDLL 360
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 12/106 (11%)
Query: 511 FSQENL-----IGAGMLGSVYRA------QLPDGKLLAVKKLDKRASSQQKDDEFLELVN 559
F++E L +G G G V +A + P + +AVK L + A++ + EL
Sbjct: 24 FARERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELKI 83
Query: 560 NIDRIRHANIVELKGYCAEHGQRLL-IYEYCSNGTLQDMLHSDDEL 604
H N+V L G C + G L+ I EYC G L + L S +L
Sbjct: 84 LTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKRDL 129
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 78/193 (40%), Gaps = 23/193 (11%)
Query: 601 DDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGL 660
+D K+ L+ I + A+ +E+L +HR+ + NI V + D GL
Sbjct: 181 EDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGL 237
Query: 661 APLISSGSVSQLSGHLLTAYGYGAPE--FESGIYTCQSDVYSFGVVMLELLT-GRKSYDR 717
A I G + APE F+ +YT QSDV+SFGV++ E+ + G Y
Sbjct: 238 ARDIYKDPDYVRKGDARLPLKWMAPETIFDR-VYTIQSDVWSFGVLLWEIFSLGASPY-- 294
Query: 718 TRNRGEQFLVRWAIPQLHDIDALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPP 777
P + + R + + P + + C EP RP
Sbjct: 295 --------------PGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPT 340
Query: 778 MSEVVQDLVDMIR 790
SE+V+ L ++++
Sbjct: 341 FSELVEHLGNLLQ 353
Score = 32.7 bits (73), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 7/91 (7%)
Query: 517 IGAGMLGSVYRA------QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G V A + + +AVK L + A+ + EL I H N+V
Sbjct: 28 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 87
Query: 571 ELKGYCAEHGQRLL-IYEYCSNGTLQDMLHS 600
L G C + G L+ I E+C G L L S
Sbjct: 88 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRS 118
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 78/193 (40%), Gaps = 23/193 (11%)
Query: 601 DDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGL 660
+D K+ L+ I + A+ +E+L +HR+ + NI V + D GL
Sbjct: 188 EDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGL 244
Query: 661 APLISSGSVSQLSGHLLTAYGYGAPE--FESGIYTCQSDVYSFGVVMLELLT-GRKSYDR 717
A I G + APE F+ +YT QSDV+SFGV++ E+ + G Y
Sbjct: 245 ARDIYKDPDYVRKGDARLPLKWMAPETIFDR-VYTIQSDVWSFGVLLWEIFSLGASPY-- 301
Query: 718 TRNRGEQFLVRWAIPQLHDIDALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPP 777
P + + R + + P + + C EP RP
Sbjct: 302 --------------PGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPT 347
Query: 778 MSEVVQDLVDMIR 790
SE+V+ L ++++
Sbjct: 348 FSELVEHLGNLLQ 360
Score = 32.7 bits (73), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 7/91 (7%)
Query: 517 IGAGMLGSVYRA------QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G V A + + +AVK L + A+ + EL I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 571 ELKGYCAEHGQRLL-IYEYCSNGTLQDMLHS 600
L G C + G L+ I E+C G L L S
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRS 125
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 78/193 (40%), Gaps = 23/193 (11%)
Query: 601 DDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGL 660
+D K+ L+ I + A+ +E+L +HR+ + NI V + D GL
Sbjct: 190 EDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGL 246
Query: 661 APLISSGSVSQLSGHLLTAYGYGAPE--FESGIYTCQSDVYSFGVVMLELLT-GRKSYDR 717
A I G + APE F+ +YT QSDV+SFGV++ E+ + G Y
Sbjct: 247 ARDIYKDPDYVRKGDARLPLKWMAPETIFDR-VYTIQSDVWSFGVLLWEIFSLGASPY-- 303
Query: 718 TRNRGEQFLVRWAIPQLHDIDALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPP 777
P + + R + + P + + C EP RP
Sbjct: 304 --------------PGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPT 349
Query: 778 MSEVVQDLVDMIR 790
SE+V+ L ++++
Sbjct: 350 FSELVEHLGNLLQ 362
Score = 32.7 bits (73), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 7/91 (7%)
Query: 517 IGAGMLGSVYRA------QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G V A + + +AVK L + A+ + EL I H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 571 ELKGYCAEHGQRLL-IYEYCSNGTLQDMLHS 600
L G C + G L+ I E+C G L L S
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRS 127
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 78/193 (40%), Gaps = 23/193 (11%)
Query: 601 DDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGL 660
+D K+ L+ I + A+ +E+L +HR+ + NI V + D GL
Sbjct: 183 EDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGL 239
Query: 661 APLISSGSVSQLSGHLLTAYGYGAPE--FESGIYTCQSDVYSFGVVMLELLT-GRKSYDR 717
A I G + APE F+ +YT QSDV+SFGV++ E+ + G Y
Sbjct: 240 ARDIYKDPDYVRKGDARLPLKWMAPETIFDR-VYTIQSDVWSFGVLLWEIFSLGASPY-- 296
Query: 718 TRNRGEQFLVRWAIPQLHDIDALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPP 777
P + + R + + P + + C EP RP
Sbjct: 297 --------------PGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPT 342
Query: 778 MSEVVQDLVDMIR 790
SE+V+ L ++++
Sbjct: 343 FSELVEHLGNLLQ 355
Score = 32.7 bits (73), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 7/91 (7%)
Query: 517 IGAGMLGSVYRA------QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
+G G G V A + + +AVK L + A+ + EL I H N+V
Sbjct: 30 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 89
Query: 571 ELKGYCAEHGQRLL-IYEYCSNGTLQDMLHS 600
L G C + G L+ I E+C G L L S
Sbjct: 90 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRS 120
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 100/239 (41%), Gaps = 51/239 (21%)
Query: 505 QQYTNSFSQENLIGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDEFLELVNNIDR 563
+++ F + LIG+G G V++A+ DGK ++++ +++ V + +
Sbjct: 8 KRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAERE------VKALAK 61
Query: 564 IRHANIVELKG--------------------YCAEHGQR---------LLIYEYCSNGTL 594
+ H NIV G Y E+ + + E+C GTL
Sbjct: 62 LDHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTL 121
Query: 595 QDMLHS--DDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXA 652
+ + ++L L+ + + + ++Y+H ++HR+ K +NI
Sbjct: 122 EQWIEKRRGEKLDKVLA----LELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQ 174
Query: 653 VSVSDCGLAP-LISSGSVSQLSGHLLTAYGYGAPE-FESGIYTCQSDVYSFGVVMLELL 709
V + D GL L + G ++ G L Y +PE S Y + D+Y+ G+++ ELL
Sbjct: 175 VKIGDFGLVTSLKNDGKRTRSKGTL----RYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 101/249 (40%), Gaps = 34/249 (13%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKR--ASSQQKDDEFLELVNNIDRIRHANIVELK 573
IG G V A + G+++A+K +DK S + +E + N+ RH +I +L
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNL---RHQHICQLY 74
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
+ ++ EYC G L D + S D L TR+ A+ Y+H
Sbjct: 75 HVLETANKIFMVLEYCPGGELFDYIISQDRLSEE---ETRVVFR-QIVSAVAYVHS---Q 127
Query: 634 PIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYG---YGAPEFESG 690
HR+ K N+ + + D GL + HL T G Y APE G
Sbjct: 128 GYAHRDLKPENLLFDEYHKLKLIDFGLC----AKPKGNKDYHLQTCCGSLAYAAPELIQG 183
Query: 691 --IYTCQSDVYSFGVVMLELLTGRKSYD--------RTRNRGEQFLVRWAIPQLHDIDAL 740
++DV+S G+++ L+ G +D + RG+ + +W P I L
Sbjct: 184 KSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPKWLSPS--SILLL 241
Query: 741 SRM--VDPS 747
+M VDP
Sbjct: 242 QQMLQVDPK 250
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 91/225 (40%), Gaps = 25/225 (11%)
Query: 497 RSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGK-LLAVKKLDKRASSQQKDDEFL 555
R FTI + F +G G G+VY A+ K ++A+K L K S +K+
Sbjct: 9 RKFTI-------DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFK--SQLEKEGVEH 59
Query: 556 ELVNNID---RIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNT 612
+L I+ +RH NI+ + Y + + L+ E+ G L L S
Sbjct: 60 QLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATF 119
Query: 613 RIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQL 672
+ A AL Y HE ++HR+ K N+ + ++D G + S +
Sbjct: 120 MEEL----ADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXM 172
Query: 673 SGHLLTAYGYGAPEF-ESGIYTCQSDVYSFGVVMLELLTGRKSYD 716
G L Y PE E + + D++ GV+ E L G +D
Sbjct: 173 CGTL----DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 91/225 (40%), Gaps = 25/225 (11%)
Query: 497 RSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGK-LLAVKKLDKRASSQQKDDEFL 555
R FTI + F +G G G+VY A+ K ++A+K L K S +K+
Sbjct: 9 RKFTI-------DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFK--SQLEKEGVEH 59
Query: 556 ELVNNID---RIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNT 612
+L I+ +RH NI+ + Y + + L+ E+ G L L S
Sbjct: 60 QLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATF 119
Query: 613 RIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQL 672
+ A AL Y HE ++HR+ K N+ + ++D G + S +
Sbjct: 120 MEEL----ADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXM 172
Query: 673 SGHLLTAYGYGAPEF-ESGIYTCQSDVYSFGVVMLELLTGRKSYD 716
G L Y PE E + + D++ GV+ E L G +D
Sbjct: 173 CGTL----DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 91/225 (40%), Gaps = 25/225 (11%)
Query: 497 RSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGK-LLAVKKLDKRASSQQKDDEFL 555
R FTI + F +G G G+VY A+ K ++A+K L K S +K+
Sbjct: 10 RKFTI-------DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFK--SQLEKEGVEH 60
Query: 556 ELVNNID---RIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNT 612
+L I+ +RH NI+ + Y + + L+ E+ G L L S
Sbjct: 61 QLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATF 120
Query: 613 RIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQL 672
+ A AL Y HE ++HR+ K N+ + ++D G + S +
Sbjct: 121 MEEL----ADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXM 173
Query: 673 SGHLLTAYGYGAPEF-ESGIYTCQSDVYSFGVVMLELLTGRKSYD 716
G L Y PE E + + D++ GV+ E L G +D
Sbjct: 174 CGTL----DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 94/227 (41%), Gaps = 14/227 (6%)
Query: 511 FSQENLIGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNI-DRIRHAN 568
F ++G G +V A +L + A+K L+KR ++ ++ ++ R+ H
Sbjct: 12 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 71
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
V+L + + Y NG L + TR A ALEYLH
Sbjct: 72 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC---TRFYTA-EIVSALEYLH 127
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFE 688
I+HR+ K NI + ++D G A ++S S + + Y +PE
Sbjct: 128 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 184
Query: 689 SGIYTCQ-SDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQL 734
+ C+ SD+++ G ++ +L+ G + G ++L+ I +L
Sbjct: 185 TEKSACKSSDLWALGCIIYQLVAGLPPF----RAGNEYLIFQKIIKL 227
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 94/227 (41%), Gaps = 14/227 (6%)
Query: 511 FSQENLIGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNI-DRIRHAN 568
F ++G G +V A +L + A+K L+KR ++ ++ ++ R+ H
Sbjct: 11 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 70
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
V+L + + Y NG L + TR A ALEYLH
Sbjct: 71 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC---TRFYTA-EIVSALEYLH 126
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFE 688
I+HR+ K NI + ++D G A ++S S + + Y +PE
Sbjct: 127 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 183
Query: 689 SGIYTCQ-SDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQL 734
+ C+ SD+++ G ++ +L+ G + G ++L+ I +L
Sbjct: 184 TEKSACKSSDLWALGCIIYQLVAGLPPF----RAGNEYLIFQKIIKL 226
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 94/227 (41%), Gaps = 14/227 (6%)
Query: 511 FSQENLIGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNI-DRIRHAN 568
F ++G G +V A +L + A+K L+KR ++ ++ ++ R+ H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
V+L + + Y NG L + TR A ALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC---TRFYTA-EIVSALEYLH 149
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFE 688
I+HR+ K NI + ++D G A ++S S + + Y +PE
Sbjct: 150 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 689 SGIYTCQ-SDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQL 734
+ C+ SD+++ G ++ +L+ G + G ++L+ I +L
Sbjct: 207 TEKSACKSSDLWALGCIIYQLVAGLPPF----RAGNEYLIFQKIIKL 249
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 96/210 (45%), Gaps = 27/210 (12%)
Query: 517 IGAGMLGSV-----YRAQLPDGKLLAVKKLDKRASSQ---QKDDEFLELVNNIDRIRHAN 568
+G G G V Y+ Q ++L K++ +++ +L+L +RH +
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKL------LRHPH 70
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
I++L +++ EY + G L D + K ++ + R A+EY H
Sbjct: 71 IIKLYDVITTPTDIVMVIEY-AGGELFDYIVE----KKRMTEDEGRRFFQQIICAIEYCH 125
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFE 688
+ IVHR+ K N+ V ++D GL+ +++ G+ + S + Y APE
Sbjct: 126 ---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTS---CGSPNYAAPEVI 179
Query: 689 SG-IYTC-QSDVYSFGVVMLELLTGRKSYD 716
+G +Y + DV+S G+V+ +L GR +D
Sbjct: 180 NGKLYAGPEVDVWSCGIVLYVMLVGRLPFD 209
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 94/227 (41%), Gaps = 14/227 (6%)
Query: 511 FSQENLIGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNI-DRIRHAN 568
F ++G G +V A +L + A+K L+KR ++ ++ ++ R+ H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
V+L + + Y NG L + TR A ALEYLH
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC---TRFYTA-EIVSALEYLH 150
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFE 688
I+HR+ K NI + ++D G A ++S S + + Y +PE
Sbjct: 151 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 207
Query: 689 SGIYTCQ-SDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQL 734
+ C+ SD+++ G ++ +L+ G + G ++L+ I +L
Sbjct: 208 TEKSACKSSDLWALGCIIYQLVAGLPPF----RAGNEYLIFQKIIKL 250
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 114/282 (40%), Gaps = 40/282 (14%)
Query: 517 IGAGMLGSVYRA---------QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+G G +++ QL + ++L +K LDK + + + F E + + ++ H
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVL-LKVLDK--AHRNYSESFFEAASMMSKLSHK 72
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
++V G C + +L+ E+ G+L L + N L W + L AA +
Sbjct: 73 HLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINIL-WKLEVAKQLAAA-----M 126
Query: 628 HEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSG-SVSQLSGHLLTA-YGYGAP 685
H + + ++H N + NI + L G S++ L +L + P
Sbjct: 127 HFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPP 186
Query: 686 EF--ESGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRM 743
E +D +SFG + E+ +G G++ L +D+ ++
Sbjct: 187 ECIENPKNLNLATDKWSFGTTLWEICSG----------GDK--------PLSALDSQRKL 228
Query: 744 VDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDL 785
Q PA + A++I+ C+ EP+ RP +++DL
Sbjct: 229 QFYEDRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDL 270
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 94/227 (41%), Gaps = 14/227 (6%)
Query: 511 FSQENLIGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNI-DRIRHAN 568
F ++G G +V A +L + A+K L+KR ++ ++ ++ R+ H
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 96
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
V+L + + Y NG L + TR A ALEYLH
Sbjct: 97 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC---TRFYTA-EIVSALEYLH 152
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFE 688
I+HR+ K NI + ++D G A ++S S + + Y +PE
Sbjct: 153 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 209
Query: 689 SGIYTCQ-SDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQL 734
+ C+ SD+++ G ++ +L+ G + G ++L+ I +L
Sbjct: 210 TEKSACKSSDLWALGCIIYQLVAGLPPF----RAGNEYLIFQKIIKL 252
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 94/227 (41%), Gaps = 14/227 (6%)
Query: 511 FSQENLIGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNI-DRIRHAN 568
F ++G G +V A +L + A+K L+KR ++ ++ ++ R+ H
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 68
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
V+L + + Y NG L + TR A ALEYLH
Sbjct: 69 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC---TRFYTA-EIVSALEYLH 124
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFE 688
I+HR+ K NI + ++D G A ++S S + + Y +PE
Sbjct: 125 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 181
Query: 689 SGIYTCQ-SDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQL 734
+ C+ SD+++ G ++ +L+ G + G ++L+ I +L
Sbjct: 182 TEKSACKSSDLWALGCIIYQLVAGLPPF----RAGNEYLIFQKIIKL 224
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 94/227 (41%), Gaps = 14/227 (6%)
Query: 511 FSQENLIGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNI-DRIRHAN 568
F ++G G +V A +L + A+K L+KR ++ ++ ++ R+ H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
V+L + + Y NG L + TR A ALEYLH
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC---TRFYTA-EIVSALEYLH 150
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFE 688
I+HR+ K NI + ++D G A ++S S + + Y +PE
Sbjct: 151 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL 207
Query: 689 SGIYTCQ-SDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQL 734
+ C+ SD+++ G ++ +L+ G + G ++L+ I +L
Sbjct: 208 TEKSACKSSDLWALGCIIYQLVAGLPPF----RAGNEYLIFQKIIKL 250
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 94/227 (41%), Gaps = 14/227 (6%)
Query: 511 FSQENLIGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNI-DRIRHAN 568
F ++G G +V A +L + A+K L+KR ++ ++ ++ R+ H
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 69
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
V+L + + Y NG L + TR A ALEYLH
Sbjct: 70 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC---TRFYTA-EIVSALEYLH 125
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFE 688
I+HR+ K NI + ++D G A ++S S + + Y +PE
Sbjct: 126 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 182
Query: 689 SGIYTCQ-SDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQL 734
+ C+ SD+++ G ++ +L+ G + G ++L+ I +L
Sbjct: 183 TEKSACKSSDLWALGCIIYQLVAGLPPF----RAGNEYLIFQKIIKL 225
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 94/227 (41%), Gaps = 14/227 (6%)
Query: 511 FSQENLIGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNI-DRIRHAN 568
F ++G G +V A +L + A+K L+KR ++ ++ ++ R+ H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
V+L + + Y NG L + TR A ALEYLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC---TRFYTA-EIVSALEYLH 147
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFE 688
I+HR+ K NI + ++D G A ++S S + + Y +PE
Sbjct: 148 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 204
Query: 689 SGIYTCQ-SDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQL 734
+ C+ SD+++ G ++ +L+ G + G ++L+ I +L
Sbjct: 205 TEKSACKSSDLWALGCIIYQLVAGLPPF----RAGNEYLIFQKIIKL 247
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 94/227 (41%), Gaps = 14/227 (6%)
Query: 511 FSQENLIGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNI-DRIRHAN 568
F ++G G +V A +L + A+K L+KR ++ ++ ++ R+ H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
V+L + + Y NG L + TR A ALEYLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC---TRFYTA-EIVSALEYLH 147
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFE 688
I+HR+ K NI + ++D G A ++S S + + Y +PE
Sbjct: 148 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 204
Query: 689 SGIYTCQ-SDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQL 734
+ C+ SD+++ G ++ +L+ G + G ++L+ I +L
Sbjct: 205 TEKSACKSSDLWALGCIIYQLVAGLPPF----RAGNEYLIFQKIIKL 247
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 97/227 (42%), Gaps = 16/227 (7%)
Query: 508 TNSFSQENLIGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRH 566
++ F Q +G G +VY+ G +A+K++ K S + + ++ + ++H
Sbjct: 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEV-KLDSEEGTPSTAIREISLMKELKH 62
Query: 567 ANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNN----LSWNTRIRMALGAAR 622
NIV L + L++E+ N + M D N L N +
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFMDNDLKKYM---DSRTVGNTPRGLELNLVKYFQWQLLQ 119
Query: 623 ALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGY 682
L + HE I+HR+ K N+ + + D GLA V+ S ++T + Y
Sbjct: 120 GLAFCHE---NKILHRDLKPQNLLINKRGQLKLGDFGLARAFGI-PVNTFSSEVVTLW-Y 174
Query: 683 GAPEFESG--IYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLV 727
AP+ G Y+ D++S G ++ E++TG+ + T + + L+
Sbjct: 175 RAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLI 221
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 94/227 (41%), Gaps = 14/227 (6%)
Query: 511 FSQENLIGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNI-DRIRHAN 568
F ++G G +V A +L + A+K L+KR ++ ++ ++ R+ H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
V+L + + Y NG L + TR A ALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC---TRFYTA-EIVSALEYLH 149
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFE 688
I+HR+ K NI + ++D G A ++S S + + Y +PE
Sbjct: 150 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 689 SGIYTCQ-SDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQL 734
+ C+ SD+++ G ++ +L+ G + G ++L+ I +L
Sbjct: 207 TEKSACKSSDLWALGCIIYQLVAGLPPF----RAGNEYLIFQKIIKL 249
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 94/227 (41%), Gaps = 14/227 (6%)
Query: 511 FSQENLIGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNI-DRIRHAN 568
F ++G G +V A +L + A+K L+KR ++ ++ ++ R+ H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
V+L + + Y NG L + TR A ALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC---TRFYTA-EIVSALEYLH 149
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFE 688
I+HR+ K NI + ++D G A ++S S + + Y +PE
Sbjct: 150 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 689 SGIYTCQ-SDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQL 734
+ C+ SD+++ G ++ +L+ G + G ++L+ I +L
Sbjct: 207 TEKSACKSSDLWALGCIIYQLVAGLPPF----RAGNEYLIFQKIIKL 249
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 13/178 (7%)
Query: 537 AVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQD 596
A+K + K + S + + LE V + + H NI++L + + L+ E G L
Sbjct: 66 AIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELF- 124
Query: 597 MLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXA---V 653
DE+ + + +N + A+ + L + + + IVHR+ K N+ +
Sbjct: 125 -----DEIIHRMKFN-EVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALI 178
Query: 654 SVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESGIYTCQSDVYSFGVVMLELLTG 711
+ D GL+ + + ++ L TAY Y APE Y + DV+S GV++ LL G
Sbjct: 179 KIVDFGLSAVFENQ--KKMKERLGTAY-YIAPEVLRKKYDEKCDVWSIGVILFILLAG 233
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 94/227 (41%), Gaps = 14/227 (6%)
Query: 511 FSQENLIGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNI-DRIRHAN 568
F ++G G +V A +L + A+K L+KR ++ ++ ++ R+ H
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 75
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
V+L + + Y NG L + TR A ALEYLH
Sbjct: 76 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC---TRFYTA-EIVSALEYLH 131
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFE 688
I+HR+ K NI + ++D G A ++S S + + Y +PE
Sbjct: 132 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 188
Query: 689 SGIYTCQ-SDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQL 734
+ C+ SD+++ G ++ +L+ G + G ++L+ I +L
Sbjct: 189 TEKSACKSSDLWALGCIIYQLVAGLPPF----RAGNEYLIFQKIIKL 231
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 94/227 (41%), Gaps = 14/227 (6%)
Query: 511 FSQENLIGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNI-DRIRHAN 568
F ++G G +V A +L + A+K L+KR ++ ++ ++ R+ H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
V+L + + Y NG L + TR A ALEYLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC---TRFYTA-EIVSALEYLH 147
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFE 688
I+HR+ K NI + ++D G A ++S S + + Y +PE
Sbjct: 148 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELL 204
Query: 689 SGIYTCQ-SDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQL 734
+ C+ SD+++ G ++ +L+ G + G ++L+ I +L
Sbjct: 205 TEKSACKSSDLWALGCIIYQLVAGLPPF----RAGNEYLIFQKIIKL 247
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 116/268 (43%), Gaps = 22/268 (8%)
Query: 511 FSQENLIGAGMLGSVYRAQL-PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
F ++G G G V+ Q+ GKL A KKL+K+ ++K + + I H+
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 570 VELKGYCAEHGQRL-LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
+ Y E L L+ + G ++ +++ DE I LE+LH
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH 306
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFE 688
Q I++R+ K N+ V +SD GLA + +G ++ G+ T G+ APE
Sbjct: 307 ---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ-TKTKGYAGTP-GFMAPELL 361
Query: 689 SG-IYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPS 747
G Y D ++ GV + E++ R + R RGE ++ + + R+++ +
Sbjct: 362 LGEEYDFSVDYFALGVTLYEMIAARGPF---RARGE---------KVENKELKQRVLEQA 409
Query: 748 LSGQYPAKSLSHFADIISRCVQSEPEFR 775
++ YP K D +Q +PE R
Sbjct: 410 VT--YPDKFSPASKDFCEALLQKDPEKR 435
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 116/268 (43%), Gaps = 22/268 (8%)
Query: 511 FSQENLIGAGMLGSVYRAQL-PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
F ++G G G V+ Q+ GKL A KKL+K+ ++K + + I H+
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 570 VELKGYCAEHGQRL-LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
+ Y E L L+ + G ++ +++ DE I LE+LH
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH 306
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFE 688
Q I++R+ K N+ V +SD GLA + +G ++ G+ T G+ APE
Sbjct: 307 ---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ-TKTKGYAGTP-GFMAPELL 361
Query: 689 SG-IYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPS 747
G Y D ++ GV + E++ R + R RGE ++ + + R+++ +
Sbjct: 362 LGEEYDFSVDYFALGVTLYEMIAARGPF---RARGE---------KVENKELKQRVLEQA 409
Query: 748 LSGQYPAKSLSHFADIISRCVQSEPEFR 775
++ YP K D +Q +PE R
Sbjct: 410 VT--YPDKFSPASKDFCEALLQKDPEKR 435
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 116/268 (43%), Gaps = 22/268 (8%)
Query: 511 FSQENLIGAGMLGSVYRAQL-PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
F ++G G G V+ Q+ GKL A KKL+K+ ++K + + I H+
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 570 VELKGYCAEHGQRL-LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
+ Y E L L+ + G ++ +++ DE I LE+LH
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH 306
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFE 688
Q I++R+ K N+ V +SD GLA + +G ++ G+ T G+ APE
Sbjct: 307 ---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ-TKTKGYAGTP-GFMAPELL 361
Query: 689 SG-IYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPS 747
G Y D ++ GV + E++ R + R RGE ++ + + R+++ +
Sbjct: 362 LGEEYDFSVDYFALGVTLYEMIAARGPF---RARGE---------KVENKELKQRVLEQA 409
Query: 748 LSGQYPAKSLSHFADIISRCVQSEPEFR 775
++ YP K D +Q +PE R
Sbjct: 410 VT--YPDKFSPASKDFCEALLQKDPEKR 435
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 116/268 (43%), Gaps = 22/268 (8%)
Query: 511 FSQENLIGAGMLGSVYRAQL-PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
F ++G G G V+ Q+ GKL A KKL+K+ ++K + + I H+
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 570 VELKGYCAEHGQRL-LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
+ Y E L L+ + G ++ +++ DE I LE+LH
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH 306
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFE 688
Q I++R+ K N+ V +SD GLA + +G ++ G+ T G+ APE
Sbjct: 307 ---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ-TKTKGYAGTP-GFMAPELL 361
Query: 689 SG-IYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPS 747
G Y D ++ GV + E++ R + R RGE ++ + + R+++ +
Sbjct: 362 LGEEYDFSVDYFALGVTLYEMIAARGPF---RARGE---------KVENKELKQRVLEQA 409
Query: 748 LSGQYPAKSLSHFADIISRCVQSEPEFR 775
++ YP K D +Q +PE R
Sbjct: 410 VT--YPDKFSPASKDFCEALLQKDPEKR 435
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 91/210 (43%), Gaps = 25/210 (11%)
Query: 517 IGAGMLGSVYRAQLPDG------KLLAVKKLDK-RASSQQKDDEFL--ELVNNIDRIR-- 565
+G+G G V + +G K++ + DK R S K+ E E+ N I ++
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 566 -HANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARAL 624
H NI++L + L+ E+ G L + + + + + N ++ G
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGIC--- 160
Query: 625 EYLHEICQPPIVHRNFKSANIXXXXXXA---VSVSDCGLAPLISSGSVSQLSGHLLTAYG 681
YLH + IVHR+ K NI + + + D GL+ S +L L TAY
Sbjct: 161 -YLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDY--KLRDRLGTAY- 213
Query: 682 YGAPEFESGIYTCQSDVYSFGVVMLELLTG 711
Y APE Y + DV+S GV+M LL G
Sbjct: 214 YIAPEVLKKKYNEKCDVWSCGVIMYILLCG 243
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 94/227 (41%), Gaps = 14/227 (6%)
Query: 511 FSQENLIGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNI-DRIRHAN 568
F ++G G +V A +L + A+K L+KR ++ ++ ++ R+ H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
V+L + + Y NG L + TR A ALEYLH
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC---TRFYTA-EIVSALEYLH 146
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFE 688
I+HR+ K NI + ++D G A ++S S + + Y +PE
Sbjct: 147 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL 203
Query: 689 SGIYTCQ-SDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQL 734
+ C+ SD+++ G ++ +L+ G + G ++L+ I +L
Sbjct: 204 TEKSACKSSDLWALGCIIYQLVAGLPPF----RAGNEYLIFQKIIKL 246
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 94/227 (41%), Gaps = 14/227 (6%)
Query: 511 FSQENLIGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNI-DRIRHAN 568
F ++G G +V A +L + A+K L+KR ++ ++ ++ R+ H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
V+L + + Y NG L + TR A ALEYLH
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC---TRFYTA-EIVSALEYLH 146
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFE 688
I+HR+ K NI + ++D G A ++S S + + Y +PE
Sbjct: 147 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 203
Query: 689 SGIYTCQ-SDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQL 734
+ C+ SD+++ G ++ +L+ G + G ++L+ I +L
Sbjct: 204 TEKSACKSSDLWALGCIIYQLVAGLPPF----RAGNEYLIFQKIIKL 246
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 93/217 (42%), Gaps = 21/217 (9%)
Query: 500 TIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLL-AVKKLDKRASSQQKDDEFLELV 558
T + QY ++ EN IG G G V A ++ A KK+ K + D F + +
Sbjct: 3 TKGDINQY---YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV--EDVDRFKQEI 57
Query: 559 NNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTL-QDMLHSDDELKNNLSWNTRIRMA 617
+ + H NI+ L ++ L+ E C+ G L + ++H K + R+
Sbjct: 58 EIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVH-----KRVFRESDAARIM 112
Query: 618 LGAARALEYLHEICQPPIVHRNFKSAN---IXXXXXXAVSVSDCGLAPLISSGSVSQLSG 674
A+ Y H++ + HR+ K N + + + D GLA G + +
Sbjct: 113 KDVLSAVAYCHKLN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM--MRT 167
Query: 675 HLLTAYGYGAPEFESGIYTCQSDVYSFGVVMLELLTG 711
+ T Y Y +P+ G+Y + D +S GV+M LL G
Sbjct: 168 KVGTPY-YVSPQVLEGLYGPECDEWSAGVMMYVLLCG 203
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 91/210 (43%), Gaps = 26/210 (12%)
Query: 517 IGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
IG G G V++A+ G+ +A+KK+ + L + + ++H N+V L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 576 CAEH--------GQRLLIYEYCSN---GTLQDMLHSDDELKNNLSWNTRIRMALGAARAL 624
C G L++++C + G L ++L +K LS R+ L L
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL-----VKFTLSEIKRVMQML--LNGL 138
Query: 625 EYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHL--LTAYGY 682
Y+H + I+HR+ K+AN+ + ++D GLA S SQ + + + Y
Sbjct: 139 YYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 683 GAPEFESGI--YTCQSDVYSFGVVMLELLT 710
PE G Y D++ G +M E+ T
Sbjct: 196 RPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 93/217 (42%), Gaps = 21/217 (9%)
Query: 500 TIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLL-AVKKLDKRASSQQKDDEFLELV 558
T + QY ++ EN IG G G V A ++ A KK+ K + D F + +
Sbjct: 20 TKGDINQY---YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV--EDVDRFKQEI 74
Query: 559 NNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTL-QDMLHSDDELKNNLSWNTRIRMA 617
+ + H NI+ L ++ L+ E C+ G L + ++H K + R+
Sbjct: 75 EIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVH-----KRVFRESDAARIM 129
Query: 618 LGAARALEYLHEICQPPIVHRNFKSAN---IXXXXXXAVSVSDCGLAPLISSGSVSQLSG 674
A+ Y H++ + HR+ K N + + + D GLA G + +
Sbjct: 130 KDVLSAVAYCHKLN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM--MRT 184
Query: 675 HLLTAYGYGAPEFESGIYTCQSDVYSFGVVMLELLTG 711
+ T Y Y +P+ G+Y + D +S GV+M LL G
Sbjct: 185 KVGTPY-YVSPQVLEGLYGPECDEWSAGVMMYVLLCG 220
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 91/210 (43%), Gaps = 26/210 (12%)
Query: 517 IGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
IG G G V++A+ G+ +A+KK+ + L + + ++H N+V L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 576 CAEH--------GQRLLIYEYCSN---GTLQDMLHSDDELKNNLSWNTRIRMALGAARAL 624
C G L++++C + G L ++L +K LS R+ L L
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL-----VKFTLSEIKRVMQML--LNGL 138
Query: 625 EYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHL--LTAYGY 682
Y+H + I+HR+ K+AN+ + ++D GLA S SQ + + + Y
Sbjct: 139 YYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 683 GAPEFESGI--YTCQSDVYSFGVVMLELLT 710
PE G Y D++ G +M E+ T
Sbjct: 196 RPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 97/231 (41%), Gaps = 44/231 (19%)
Query: 501 IASLQQYTNSFSQENLIGAGMLGSVYRA------QLPDGKLLAVKKLDKRASSQQKDDEF 554
+A+ ++T+ + +G G V R Q K++ KKL R D +
Sbjct: 23 MATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSAR------DHQK 76
Query: 555 LELVNNIDRI-RHANIVELKGYCAEHGQRLLIYEYCSNGTL-QDMLHSDDELKNNLSWNT 612
LE I R+ +H NIV L +E G L+++ + G L +D++ + + +
Sbjct: 77 LEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE--------YYS 128
Query: 613 RIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXX---XAVSVSDCGLAPLIS---- 665
+ + LE ++ I Q IVHR+ K N+ AV ++D GLA +
Sbjct: 129 EADASHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQ 188
Query: 666 -----SGSVSQLSGHLLTAYGYGAPEFESGIYTCQSDVYSFGVVMLELLTG 711
+G+ LS +L YG P D+++ GV++ LL G
Sbjct: 189 AWFGFAGTPGYLSPEVLRKDPYGKP----------VDIWACGVILYILLVG 229
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 93/227 (40%), Gaps = 14/227 (6%)
Query: 511 FSQENLIGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNI-DRIRHAN 568
F ++G G + A +L + A+K L+KR ++ ++ ++ R+ H
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 569 IVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
V+L + + Y NG L + TR A ALEYLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC---TRFYTA-EIVSALEYLH 147
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFE 688
I+HR+ K NI + ++D G A ++S S + + Y +PE
Sbjct: 148 ---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 204
Query: 689 SGIYTCQ-SDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQL 734
+ C+ SD+++ G ++ +L+ G + G ++L+ I +L
Sbjct: 205 TEKSACKSSDLWALGCIIYQLVAGLPPF----RAGNEYLIFQKIIKL 247
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 91/210 (43%), Gaps = 26/210 (12%)
Query: 517 IGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
IG G G V++A+ G+ +A+KK+ + L + + ++H N+V L
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 576 CAEH--------GQRLLIYEYCSN---GTLQDMLHSDDELKNNLSWNTRIRMALGAARAL 624
C G L++++C + G L ++L +K LS R+ L L
Sbjct: 85 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL-----VKFTLSEIKRVMQML--LNGL 137
Query: 625 EYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHL--LTAYGY 682
Y+H + I+HR+ K+AN+ + ++D GLA S SQ + + + Y
Sbjct: 138 YYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 194
Query: 683 GAPEFESGI--YTCQSDVYSFGVVMLELLT 710
PE G Y D++ G +M E+ T
Sbjct: 195 RPPELLLGERDYGPPIDLWGAGCIMAEMWT 224
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL--- 572
+G+G GSV A G +AVKKL + S + + ++H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 573 --KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
E + + + L +++ +++ + + R L+Y+H
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 149
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG 690
I+HR+ K +N+ + + D GLA + +++G++ T + Y APE
Sbjct: 150 -SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTADEMTGYVATRW-YRAPEIMLN 203
Query: 691 I--YTCQSDVYSFGVVMLELLTGRKSY 715
Y D++S G +M ELLTGR +
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 117/282 (41%), Gaps = 40/282 (14%)
Query: 517 IGAGMLGSVYRA---------QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+G G +++ QL + ++L +K LDK + + + F E + + ++ H
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVL-LKVLDK--AHRNYSESFFEAASMMSKLSHK 72
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
++V G C + +L+ E+ G+L L + KN ++ ++ +A A A+ +L
Sbjct: 73 HLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKN---KNCINILWKLEVAKQLAWAMHFL 129
Query: 628 HEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSG-SVSQLSGHLLTA-YGYGAP 685
E ++H N + NI + L G S++ L +L + P
Sbjct: 130 EE---NTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPP 186
Query: 686 EF--ESGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRM 743
E +D +SFG + E+ +G G++ L +D+ ++
Sbjct: 187 ECIENPKNLNLATDKWSFGTTLWEICSG----------GDK--------PLSALDSQRKL 228
Query: 744 VDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDL 785
Q PA + A++I+ C+ EP+ RP +++DL
Sbjct: 229 QFYEDRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDL 270
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL--- 572
+G+G GSV A G +AVKKL + S + + ++H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 573 --KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
E + + + L +++ +++ + + R L+Y+H
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 149
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG 690
I+HR+ K +N+ + + D GLA + +++G++ T + Y APE
Sbjct: 150 -SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTADEMTGYVATRW-YRAPEIMLN 203
Query: 691 I--YTCQSDVYSFGVVMLELLTGRKSY 715
Y D++S G +M ELLTGR +
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL--- 572
+G+G GSV A G +AVKKL + S + + ++H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 573 --KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
E + + + L +++ +++ + + R L+Y+H
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 149
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG 690
I+HR+ K +N+ + + D GLA + +++G++ T + Y APE
Sbjct: 150 -SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTADEMTGYVATRW-YRAPEIMLN 203
Query: 691 I--YTCQSDVYSFGVVMLELLTGRKSY 715
Y D++S G +M ELLTGR +
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL--- 572
+G+G GSV A G +AVKKL K S + + ++H N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 573 --KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
E + + + L +++ +++ + + R L+Y+H
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 154
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG 690
I+HR+ K +N+ + + D GLA + +++G++ T + Y APE
Sbjct: 155 -SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYVATRW-YRAPEIMLN 208
Query: 691 I--YTCQSDVYSFGVVMLELLTGRKSY 715
Y D++S G +M ELLTGR +
Sbjct: 209 WMHYNQTVDIWSVGCIMAELLTGRTLF 235
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 88/204 (43%), Gaps = 21/204 (10%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL--- 572
+G+G GSV + + G +AVKKL + S + + ++H N++ L
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 118
Query: 573 --KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
E + + + L +++ +++ + + R L+Y+H
Sbjct: 119 FTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 171
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG 690
I+HR+ K +N+ + + D GLA + +++G++ T + Y APE
Sbjct: 172 -SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYVATRW-YRAPEIMLN 225
Query: 691 I--YTCQSDVYSFGVVMLELLTGR 712
Y D++S G +M ELLTGR
Sbjct: 226 WMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 89/207 (42%), Gaps = 21/207 (10%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL--- 572
IG+G GSV A G +AVKKL + S + + ++H N++ L
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 573 --KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
E + + + L +++ +++ + + R L+Y+H
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 147
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG 690
I+HR+ K +N+ + + D GLA + +++G++ T + Y APE
Sbjct: 148 -SADIIHRDLKPSNLAVNEDXELKILDFGLA----RHTDDEMTGYVATRW-YRAPEIMLN 201
Query: 691 I--YTCQSDVYSFGVVMLELLTGRKSY 715
Y D++S G +M ELLTGR +
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 97/209 (46%), Gaps = 21/209 (10%)
Query: 516 LIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKG 574
++G G G VY + L + +A+K++ +R S + E + ++H NIV+ G
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQ--PLHEEIALHKHLKHKNIVQYLG 86
Query: 575 YCAEHGQRLLIYEYCSNGTLQDMLHSD-DELKNN---LSWNTRIRMALGAARALEYLHEI 630
+E+G + E G+L +L S LK+N + + T+ + L+YLH+
Sbjct: 87 SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQIL-----EGLKYLHD- 140
Query: 631 CQPPIVHRNFKSANIXXXXXXAV-SVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FE 688
IVHR+ K N+ V +SD G + ++ ++ + Y APE +
Sbjct: 141 --NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA--GINPCTETFTGTLQYMAPEIID 196
Query: 689 SGI--YTCQSDVYSFGVVMLELLTGRKSY 715
G Y +D++S G ++E+ TG+ +
Sbjct: 197 KGPRGYGKAADIWSLGCTIIEMATGKPPF 225
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 90/205 (43%), Gaps = 14/205 (6%)
Query: 517 IGAGMLGSV---YRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELK 573
+G+G G+V Y K +AVK L A+ DE L N + ++ + IV +
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 436
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
G C E +L+ E G L L + +K+ I + + ++YL E
Sbjct: 437 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD----KNIIELVHQVSMGMKYLEE---S 488
Query: 634 PIVHRNFKSANIXXXXXXAVSVSDCGLAP-LISSGSVSQLSGHLLTAYGYGAPE-FESGI 691
VHR+ + N+ +SD GL+ L + + + H + APE
Sbjct: 489 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 548
Query: 692 YTCQSDVYSFGVVMLELLT-GRKSY 715
++ +SDV+SFGV+M E + G+K Y
Sbjct: 549 FSSKSDVWSFGVLMWEAFSYGQKPY 573
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 89/207 (42%), Gaps = 21/207 (10%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL--- 572
+G+G GSV A G +AVKKL + S + + ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 573 --KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
E + + + L +++ +++ + + R L+Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 142
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE--FE 688
I+HR+ K +N+ + + D GLA + +++G++ T + Y APE
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYVATRW-YRAPEIMLN 196
Query: 689 SGIYTCQSDVYSFGVVMLELLTGRKSY 715
+ Y D++S G +M ELLTGR +
Sbjct: 197 AMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL--- 572
+G+G GSV A G +AVKKL + S + + ++H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 573 --KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
E + + + L +++ +++ + + R L+Y+H
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 138
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG 690
I+HR+ K +N+ + + D GLA + +++G++ T + Y APE
Sbjct: 139 -SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYVATRW-YRAPEIMLN 192
Query: 691 I--YTCQSDVYSFGVVMLELLTGRKSY 715
Y D++S G +M ELLTGR +
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLTGRTLF 219
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 97/209 (46%), Gaps = 21/209 (10%)
Query: 516 LIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKG 574
++G G G VY + L + +A+K++ +R S + E + ++H NIV+ G
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQ--PLHEEIALHKHLKHKNIVQYLG 72
Query: 575 YCAEHGQRLLIYEYCSNGTLQDMLHSD-DELKNN---LSWNTRIRMALGAARALEYLHEI 630
+E+G + E G+L +L S LK+N + + T+ + L+YLH+
Sbjct: 73 SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQIL-----EGLKYLHD- 126
Query: 631 CQPPIVHRNFKSANIXXXXXXAV-SVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FE 688
IVHR+ K N+ V +SD G + ++ ++ + Y APE +
Sbjct: 127 --NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA--GINPCTETFTGTLQYMAPEIID 182
Query: 689 SGI--YTCQSDVYSFGVVMLELLTGRKSY 715
G Y +D++S G ++E+ TG+ +
Sbjct: 183 KGPRGYGKAADIWSLGCTIIEMATGKPPF 211
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL--- 572
+G+G GSV A G +AVKKL + S + + ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 573 --KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
E + + + L +++ +++ + + R L+Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 142
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG 690
I+HR+ K +N+ + + D GLA + +++G++ T + Y APE
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDAGLA----RHTDDEMTGYVATRW-YRAPEIMLN 196
Query: 691 I--YTCQSDVYSFGVVMLELLTGRKSY 715
Y D++S G +M ELLTGR +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL--- 572
+G+G GSV A G +AVKKL + S + + ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 573 --KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
E + + + L +++ +++ + + R L+Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 142
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG 690
I+HR+ K +N+ + + D GLA + +++G++ T + Y APE
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYVATRW-YRAPEIMLN 196
Query: 691 I--YTCQSDVYSFGVVMLELLTGRKSY 715
Y D++S G +M ELLTGR +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 83/211 (39%), Gaps = 17/211 (8%)
Query: 511 FSQENLIGAGMLGSVYRAQLPD-GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
F ++G G G V+ A+ + A+K L K D E + + + +
Sbjct: 20 FELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 79
Query: 570 VELKGYCAEHGQRLLIY--EYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
+C + L + EY + G L M H K +LS R AA + L
Sbjct: 80 FLTHMFCTFQTKENLFFVMEYLNGGDL--MYHIQSCHKFDLS-----RATFYAAEIILGL 132
Query: 628 HEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAP--LISSGSVSQLSGHLLTAYGYGAP 685
+ IV+R+ K NI + ++D G+ ++ ++ G Y AP
Sbjct: 133 QFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCG----TPDYIAP 188
Query: 686 EFESG-IYTCQSDVYSFGVVMLELLTGRKSY 715
E G Y D +SFGV++ E+L G+ +
Sbjct: 189 EILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 219
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL--- 572
+G+G GSV A G +AVKKL + S + + ++H N++ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 573 --KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
E + + + L +++ +++ + + R L+Y+H
Sbjct: 109 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 161
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG 690
I+HR+ K +N+ + + D GLA + +++G++ T + Y APE
Sbjct: 162 -SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYVATRW-YRAPEIMLN 215
Query: 691 I--YTCQSDVYSFGVVMLELLTGRKSY 715
Y D++S G +M ELLTGR +
Sbjct: 216 WMHYNQTVDIWSVGCIMAELLTGRTLF 242
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL--- 572
+G+G GSV A G +AVKKL + S + + ++H N++ L
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 573 --KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
E + + + L +++ +++ + + R L+Y+H
Sbjct: 100 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 152
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG 690
I+HR+ K +N+ + + D GLA + +++G++ T + Y APE
Sbjct: 153 -SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYVATRW-YRAPEIMLN 206
Query: 691 I--YTCQSDVYSFGVVMLELLTGRKSY 715
Y D++S G +M ELLTGR +
Sbjct: 207 WMHYNQTVDIWSVGCIMAELLTGRTLF 233
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 114/275 (41%), Gaps = 36/275 (13%)
Query: 516 LIGAGMLGSVYRAQLPDGK-LLAVKKLDKRASSQQKDDEFLELVNNIDR-IRHANIVELK 573
+G G + D K + A K + K + E + + +I R + H ++V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
G+ ++ ++ E C +L ++ L + ++ LG +YLH +
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC----QYLH---RN 136
Query: 634 PIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESGI-Y 692
++HR+ K N+ V + D GLA + + + L Y APE S +
Sbjct: 137 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSKKGH 194
Query: 693 TCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVR---WAIPQLHDIDALSRMVDPSLS 749
+ + DV+S G +M LL G+ ++ + + ++ ++IP + ++P
Sbjct: 195 SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIP---------KHINPVA- 244
Query: 750 GQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQD 784
A +I + +Q++P RP ++E++ D
Sbjct: 245 -----------ASLIQKMLQTDPTARPTINELLND 268
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL--- 572
+G+G GSV A G +AVKKL + S + + ++H N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 573 --KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
E + + + L +++ +++ + + R L+Y+H
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 162
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG 690
I+HR+ K +N+ + + D GLA + +++G++ T + Y APE
Sbjct: 163 -SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYVATRW-YRAPEIMLN 216
Query: 691 I--YTCQSDVYSFGVVMLELLTGRKSY 715
Y D++S G +M ELLTGR +
Sbjct: 217 WMHYNQTVDIWSVGCIMAELLTGRTLF 243
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 90/205 (43%), Gaps = 14/205 (6%)
Query: 517 IGAGMLGSV---YRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELK 573
+G+G G+V Y K +AVK L A+ DE L N + ++ + IV +
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 437
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
G C E +L+ E G L L + +K+ I + + ++YL E
Sbjct: 438 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD----KNIIELVHQVSMGMKYLEE---S 489
Query: 634 PIVHRNFKSANIXXXXXXAVSVSDCGLAP-LISSGSVSQLSGHLLTAYGYGAPE-FESGI 691
VHR+ + N+ +SD GL+ L + + + H + APE
Sbjct: 490 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 549
Query: 692 YTCQSDVYSFGVVMLELLT-GRKSY 715
++ +SDV+SFGV+M E + G+K Y
Sbjct: 550 FSSKSDVWSFGVLMWEAFSYGQKPY 574
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 114/275 (41%), Gaps = 36/275 (13%)
Query: 516 LIGAGMLGSVYRAQLPDGK-LLAVKKLDKRASSQQKDDEFLELVNNIDR-IRHANIVELK 573
+G G + D K + A K + K + E + + +I R + H ++V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
G+ ++ ++ E C +L ++ L + ++ LG +YLH +
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC----QYLH---RN 136
Query: 634 PIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESGI-Y 692
++HR+ K N+ V + D GLA + + + L Y APE S +
Sbjct: 137 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSKKGH 194
Query: 693 TCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVR---WAIPQLHDIDALSRMVDPSLS 749
+ + DV+S G +M LL G+ ++ + + ++ ++IP + ++P
Sbjct: 195 SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIP---------KHINPVA- 244
Query: 750 GQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQD 784
A +I + +Q++P RP ++E++ D
Sbjct: 245 -----------ASLIQKMLQTDPTARPTINELLND 268
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 90/205 (43%), Gaps = 14/205 (6%)
Query: 517 IGAGMLGSV---YRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELK 573
+G+G G+V Y K +AVK L A+ DE L N + ++ + IV +
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
G C E +L+ E G L L + +K+ I + + ++YL E
Sbjct: 95 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD----KNIIELVHQVSMGMKYLEE---S 146
Query: 634 PIVHRNFKSANIXXXXXXAVSVSDCGLAP-LISSGSVSQLSGHLLTAYGYGAPE-FESGI 691
VHR+ + N+ +SD GL+ L + + + H + APE
Sbjct: 147 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 206
Query: 692 YTCQSDVYSFGVVMLELLT-GRKSY 715
++ +SDV+SFGV+M E + G+K Y
Sbjct: 207 FSSKSDVWSFGVLMWEAFSYGQKPY 231
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 90/205 (43%), Gaps = 14/205 (6%)
Query: 517 IGAGMLGSV---YRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELK 573
+G+G G+V Y K +AVK L A+ DE L N + ++ + IV +
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
G C E +L+ E G L L + +K+ I + + ++YL E
Sbjct: 95 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD----KNIIELVHQVSMGMKYLEE---S 146
Query: 634 PIVHRNFKSANIXXXXXXAVSVSDCGLAP-LISSGSVSQLSGHLLTAYGYGAPE-FESGI 691
VHR+ + N+ +SD GL+ L + + + H + APE
Sbjct: 147 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 206
Query: 692 YTCQSDVYSFGVVMLELLT-GRKSY 715
++ +SDV+SFGV+M E + G+K Y
Sbjct: 207 FSSKSDVWSFGVLMWEAFSYGQKPY 231
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL--- 572
+G+G GSV A G +AVKKL + S + + ++H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 573 --KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
E + + + L +++ +++ + + R L+Y+H
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 144
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG 690
I+HR+ K +N+ + + D GLA + +++G++ T + Y APE
Sbjct: 145 -SADIIHRDLKPSNLAVNEDSELKILDFGLA----RHTDDEMTGYVATRW-YRAPEIMLN 198
Query: 691 I--YTCQSDVYSFGVVMLELLTGRKSY 715
Y D++S G +M ELLTGR +
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 114/275 (41%), Gaps = 36/275 (13%)
Query: 516 LIGAGMLGSVYRAQLPDGK-LLAVKKLDKRASSQQKDDEFLELVNNIDR-IRHANIVELK 573
+G G + D K + A K + K + E + + +I R + H ++V
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 87
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
G+ ++ ++ E C +L ++ L + ++ LG +YLH +
Sbjct: 88 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC----QYLH---RN 140
Query: 634 PIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESGI-Y 692
++HR+ K N+ V + D GLA + + + L Y APE S +
Sbjct: 141 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSKKGH 198
Query: 693 TCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVR---WAIPQLHDIDALSRMVDPSLS 749
+ + DV+S G +M LL G+ ++ + + ++ ++IP + ++P
Sbjct: 199 SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIP---------KHINPVA- 248
Query: 750 GQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQD 784
A +I + +Q++P RP ++E++ D
Sbjct: 249 -----------ASLIQKMLQTDPTARPTINELLND 272
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL--- 572
+G+G GSV A G +AVKKL + S + + ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 573 --KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
E + + + L +++ S +++ + + R L+Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQF-----LIYQILRGLKYIH-- 142
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG 690
I+HR+ K +N+ + + D GL + +++G++ T + Y APE
Sbjct: 143 -SADIIHRDLKPSNLAVNEDSELKILDFGLC----RHTDDEMTGYVATRW-YRAPEIMLN 196
Query: 691 I--YTCQSDVYSFGVVMLELLTGRKSY 715
Y D++S G +M ELLTGR +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 89/207 (42%), Gaps = 21/207 (10%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL--- 572
+G+G GSV A G +AVKKL + S + + ++H N++ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 573 --KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
E + + + L +++ +++ + + R L+Y+H
Sbjct: 101 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 153
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG 690
I+HR+ K +N+ + + D GLA + +++G++ T + Y APE
Sbjct: 154 -SADIIHRDLKPSNLAVNEDXELKILDFGLA----RHTDDEMTGYVATRW-YRAPEIMLN 207
Query: 691 I--YTCQSDVYSFGVVMLELLTGRKSY 715
Y D++S G +M ELLTGR +
Sbjct: 208 WMHYNQTVDIWSVGCIMAELLTGRTLF 234
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 90/205 (43%), Gaps = 14/205 (6%)
Query: 517 IGAGMLGSV---YRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELK 573
+G+G G+V Y K +AVK L A+ DE L N + ++ + IV +
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 92
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
G C E +L+ E G L L + +K+ I + + ++YL E
Sbjct: 93 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD----KNIIELVHQVSMGMKYLEE---S 144
Query: 634 PIVHRNFKSANIXXXXXXAVSVSDCGLAP-LISSGSVSQLSGHLLTAYGYGAPE-FESGI 691
VHR+ + N+ +SD GL+ L + + + H + APE
Sbjct: 145 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 204
Query: 692 YTCQSDVYSFGVVMLELLT-GRKSY 715
++ +SDV+SFGV+M E + G+K Y
Sbjct: 205 FSSKSDVWSFGVLMWEAFSYGQKPY 229
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL--- 572
+G+G GSV A G +AVKKL + S + + ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 573 --KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
E + + + L +++ +++ + + R L+Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 142
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG 690
I+HR+ K +N+ + + D GLA + +++G++ T + Y APE
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYVATRW-YRAPEIMLN 196
Query: 691 I--YTCQSDVYSFGVVMLELLTGRKSY 715
Y D++S G +M ELLTGR +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 89/207 (42%), Gaps = 21/207 (10%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL--- 572
+G+G GSV A G +AVKKL + S + + ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 573 --KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
E + + + L +++ +++ + + R L+Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQF-----LIYQILRGLKYIH-- 142
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG 690
I+HR+ K +N+ + + D GLA + +++G++ T + Y APE
Sbjct: 143 -SADIIHRDLKPSNLAVNEDXELKILDFGLA----RHTDDEMTGYVATRW-YRAPEIMLN 196
Query: 691 I--YTCQSDVYSFGVVMLELLTGRKSY 715
Y D++S G +M ELLTGR +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL--- 572
+G+G GSV A G +AVKKL + S + + ++H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 573 --KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
E + + + L +++ +++ + + R L+Y+H
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 148
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG 690
I+HR+ K +N+ + + D GLA + +++G++ T + Y APE
Sbjct: 149 -SADIIHRDLKPSNLAVNEDSELKILDFGLA----RHTDDEMTGYVATRW-YRAPEIMLN 202
Query: 691 I--YTCQSDVYSFGVVMLELLTGRKSY 715
Y D++S G +M ELLTGR +
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL--- 572
+G+G GSV A G +AVKKL + S + + ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 573 --KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
E + + + L +++ +++ + + R L+Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 142
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG 690
I+HR+ K +N+ + + D GLA + +++G++ T + Y APE
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYVATRW-YRAPEIMLN 196
Query: 691 I--YTCQSDVYSFGVVMLELLTGRKSY 715
Y D++S G +M ELLTGR +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 115/300 (38%), Gaps = 45/300 (15%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKD----DEFLELVNNIDRIRHANIVE 571
+G+G V + Q GK A K + KR S + +E VN + IRH NI+
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72
Query: 572 LKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEIC 631
L +LI E S G L D L K +L+ + + + YLH
Sbjct: 73 LHDIFENKTDVVLILELVSGGELFDFLAE----KESLTEDEATQFLKQILDGVHYLH--- 125
Query: 632 QPPIVHRNFKSANIXXXXXXA----VSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEF 687
I H + K NI + + D G+A I +G+ + +G PEF
Sbjct: 126 SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFK--------NIFGTPEF 177
Query: 688 ---ESGIYT---CQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDALS 741
E Y ++D++S GV+ LL+G FL L +I A
Sbjct: 178 VAPEIVNYEPLGLEADMWSIGVITYILLSG----------ASPFLGETKQETLTNISA-- 225
Query: 742 RMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQ-DLVDMIRRERCSNESLG 800
V+ +Y + + D I R + +P+ R +++ ++ + IRR E G
Sbjct: 226 --VNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRRNVRGEDSG 283
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 118/306 (38%), Gaps = 57/306 (18%)
Query: 502 ASLQQYTNSFSQENLIGAGMLGSVYR-AQLPDGKLLAVKKLDKRASSQQKDDEFLELVNN 560
A+ +++ + +++IG G+ V R G AVK ++ ++++ E LE V
Sbjct: 87 AAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIME--VTAERLSPEQLEEVRE 144
Query: 561 IDRIR---------HANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWN 611
R H +I+ L L+++ G L D L K LS
Sbjct: 145 ATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTE----KVALSEK 200
Query: 612 TRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSG-SVS 670
+ A+ +LH IVHR+ K NI + +SD G + + G +
Sbjct: 201 ETRSIMRSLLEAVSFLH---ANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLR 257
Query: 671 QLSGHLLTAYGYGAPEFESGI-------YTCQSDVYSFGVVMLELLTGRKSYDRTRNRGE 723
+L G GY APE Y + D+++ GV++ LL G +
Sbjct: 258 ELCG----TPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPF-------- 305
Query: 724 QFLVRWAIPQLHDIDALSRMVDPSLSGQYPAKS------LSHFADIISRCVQSEPEFRPP 777
W Q+ + RM+ + GQY S S D+ISR +Q +PE R
Sbjct: 306 -----WHRRQI----LMLRMI---MEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLT 353
Query: 778 MSEVVQ 783
+ +Q
Sbjct: 354 AEQALQ 359
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL--- 572
+G+G GSV A G +AVKKL + S + + ++H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 573 --KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
E + + + L +++ +++ + + R L+Y+H
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 144
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG 690
I+HR+ K +N+ + + D GLA + +++G++ T + Y APE
Sbjct: 145 -SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYVATRW-YRAPEIMLN 198
Query: 691 I--YTCQSDVYSFGVVMLELLTGRKSY 715
Y D++S G +M ELLTGR +
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL--- 572
+G+G GSV A G +AVKKL + S + + ++H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 573 --KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
E + + + L +++ +++ + + R L+Y+H
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 148
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG 690
I+HR+ K +N+ + + D GLA + +++G++ T + Y APE
Sbjct: 149 -SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYVATRW-YRAPEIMLN 202
Query: 691 I--YTCQSDVYSFGVVMLELLTGRKSY 715
Y D++S G +M ELLTGR +
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 89/207 (42%), Gaps = 21/207 (10%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL--- 572
+G+G GSV A G +AVKKL + S + + ++H N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 573 --KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
E + + + L +++ +++ + + R L+Y+H
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 147
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG 690
I+HR+ K +N+ + + D GLA + +++G++ T + Y APE
Sbjct: 148 -SADIIHRDLKPSNLAVNEDXELKILDFGLA----RHTDDEMTGYVATRW-YRAPEIMLN 201
Query: 691 I--YTCQSDVYSFGVVMLELLTGRKSY 715
Y D++S G +M ELLTGR +
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL--- 572
+G+G GSV A G +AVKKL + S + + ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 573 --KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
E + + + L +++ +++ + + R L+Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 142
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG 690
I+HR+ K +N+ + + D GLA + +++G++ T + Y APE
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYVATRW-YRAPEIMLN 196
Query: 691 I--YTCQSDVYSFGVVMLELLTGRKSY 715
Y D++S G +M ELLTGR +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL--- 572
+G+G GSV A G +AVKKL + S + + ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 573 --KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
E + + + L +++ +++ + + R L+Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 142
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG 690
I+HR+ K +N+ + + D GLA + +++G++ T + Y APE
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYVATRW-YRAPEIMLN 196
Query: 691 I--YTCQSDVYSFGVVMLELLTGRKSY 715
Y D++S G +M ELLTGR +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 103 SSIRVIDLSNNHIGGSI-PSIL---PVTMQNFFLSDNQFSGSIPSSLATLTLLTDMSLNN 158
+S+ +DLS+N+ G I P++ T+Q +L +N F+G IP +L+ + L + L+
Sbjct: 365 ASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSF 424
Query: 159 NLLSGEIPDAFQSLTGLIXXXXXXXXXXGELPPSL 193
N LSG IP + SL+ L GE+P L
Sbjct: 425 NYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQEL 459
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Query: 105 IRVIDLSNNHIGGSIP-SILPVTMQNFF-LSDNQFSGSIPSSLATLTLLTDMSLNNNLLS 162
+ +++L +N I GSIP + + N LS N+ G IP +++ LT+LT++ L+NN LS
Sbjct: 655 LFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLS 714
Query: 163 GEIPDAFQ 170
G IP+ Q
Sbjct: 715 GPIPEMGQ 722
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 57/142 (40%), Gaps = 24/142 (16%)
Query: 102 FSSIRVIDLSNNHIGGSIPSILPV--TMQNFFLSDNQFSGSIPSSLATLTLLTDMSLNNN 159
S +R + L N + G IP L T++ L N +G IPS L+ T L +SL+NN
Sbjct: 438 LSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNN 497
Query: 160 LLSGEIPDAFQSLTGLIXXXXXXXXXXGELPPSLEXXXXXXXXXXXXXXXXGTLDVLQDL 219
L+GEIP L L G +P L + L
Sbjct: 498 RLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGD--------------------CRSL 537
Query: 220 PLRDLNIENNLFSGPIPEKMLQ 241
DLN NLF+G IP M +
Sbjct: 538 IWLDLNT--NLFNGTIPAAMFK 557
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 103 SSIRVIDLSNNHIGGSIPSILPVTMQNFF---LSDNQFSGSIPSSLATLTLLTDMSLNNN 159
+++ I LSNN + G IP + ++N LS+N FSG+IP+ L L + LN N
Sbjct: 487 TNLNWISLSNNRLTGEIPKWIG-RLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTN 545
Query: 160 LLSGEIPDAFQSLTGLI 176
L +G IP A +G I
Sbjct: 546 LFNGTIPAAMFKQSGKI 562
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Query: 104 SIRVIDLSNNHIGGSIPSILPVTMQNFF---LSDNQFSGSIPSSLATLTLLTDMSLNNNL 160
S+ +D+S N + G IP + +M F L N SGSIP + L L + L++N
Sbjct: 630 SMMFLDMSYNMLSGYIPKEIG-SMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNK 688
Query: 161 LSGEIPDAFQSLTGLIXXXXXXXXXXGELP 190
L G IP A +LT L G +P
Sbjct: 689 LDGRIPQAMSALTMLTEIDLSNNNLSGPIP 718
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 60/144 (41%), Gaps = 25/144 (17%)
Query: 104 SIRVIDLSNNHIGGSIPSILPV---TMQNFFLSDNQFSGSIPSSLATLTLLTDMSLNNNL 160
S++ + L+ N G IP L T+ LS N F G++P + +LL ++L++N
Sbjct: 267 SLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNN 326
Query: 161 LSGEIP-DAFQSLTGLIXXXXXXXXXXGELPPSLEXXXXXXXXXXXXXXXXGTLDVLQDL 219
SGE+P D + GL GELP SL
Sbjct: 327 FSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSAS-------------------- 366
Query: 220 PLRDLNIENNLFSGPIPEKMLQIP 243
L L++ +N FSGPI + Q P
Sbjct: 367 -LLTLDLSSNNFSGPILPNLCQNP 389
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 46/114 (40%), Gaps = 23/114 (20%)
Query: 132 LSDNQFSGSIPSSLATLTLLTDMSLNNNLLSGEIPDAFQSLTGLIXXXXXXXXXXGELPP 191
+S N SG IP + ++ L ++L +N +SG IPD L GL G +P
Sbjct: 636 MSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQ 695
Query: 192 SLEXXXXXXXXXXXXXXXXGTLDVLQDLPLRDLNIENNLFSGPIPEKMLQIPNF 245
++ L ++++ NN SGPIPE M Q F
Sbjct: 696 AMSALTM----------------------LTEIDLSNNNLSGPIPE-MGQFETF 726
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL--- 572
+G+G GSV A G +AVKKL + S + + ++H N++ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 573 --KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
E + + + L +++ +++ + + R L+Y+H
Sbjct: 87 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 139
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG 690
I+HR+ K +N+ + + D GLA + +++G++ T + Y APE
Sbjct: 140 -SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYVATRW-YRAPEIMLN 193
Query: 691 I--YTCQSDVYSFGVVMLELLTGRKSY 715
Y D++S G +M ELLTGR +
Sbjct: 194 WMHYNQTVDIWSVGCIMAELLTGRTLF 220
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL--- 572
+G+G GSV A G +AVKKL + S + + ++H N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 573 --KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
E + + + L +++ +++ + + R L+Y+H
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 154
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG 690
I+HR+ K +N+ + + D GLA + +++G++ T + Y APE
Sbjct: 155 -SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYVATRW-YRAPEIMLN 208
Query: 691 I--YTCQSDVYSFGVVMLELLTGRKSY 715
Y D++S G +M ELLTGR +
Sbjct: 209 WMHYNQTVDIWSVGCIMAELLTGRTLF 235
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL--- 572
+G+G GSV A G +AVKKL + S + + ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 573 --KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
E + + + L +++ +++ + + R L+Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 142
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG 690
I+HR+ K +N+ + + D GLA + +++G++ T + Y APE
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYVATRW-YRAPEIMLN 196
Query: 691 I--YTCQSDVYSFGVVMLELLTGRKSY 715
Y D++S G +M ELLTGR +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL--- 572
+G+G GSV A G +AVKKL + S + + ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 573 --KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
E + + + L +++ +++ + + R L+Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQF-----LIYQILRGLKYIH-- 142
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG 690
I+HR+ K +N+ + + D GLA + +++G++ T + Y APE
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYVATRW-YRAPEIMLN 196
Query: 691 I--YTCQSDVYSFGVVMLELLTGRKSY 715
Y D++S G +M ELLTGR +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL--- 572
+G+G GSV A G +AVKKL + S + + ++H N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 573 --KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
E + + + L +++ +++ + + R L+Y+H
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 154
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG 690
I+HR+ K +N+ + + D GLA + +++G++ T + Y APE
Sbjct: 155 -SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYVATRW-YRAPEIMLN 208
Query: 691 I--YTCQSDVYSFGVVMLELLTGRKSY 715
Y D++S G +M ELLTGR +
Sbjct: 209 WMHYNQTVDIWSVGCIMAELLTGRTLF 235
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL--- 572
+G+G GSV A G +AVKKL + S + + ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 573 --KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
E + + + L +++ +++ + + R L+Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 142
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG 690
I+HR+ K +N+ + + D GLA + +++G++ T + Y APE
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYVATRW-YRAPEIMLN 196
Query: 691 I--YTCQSDVYSFGVVMLELLTGRKSY 715
Y D++S G +M ELLTGR +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL--- 572
+G+G GSV A G +AVKKL + S + + ++H N++ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 573 --KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
E + + + L +++ +++ + + R L+Y+H
Sbjct: 101 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 153
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG 690
I+HR+ K +N+ + + D GLA + +++G++ T + Y APE
Sbjct: 154 -SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYVATRW-YRAPEIMLN 207
Query: 691 I--YTCQSDVYSFGVVMLELLTGRKSY 715
Y D++S G +M ELLTGR +
Sbjct: 208 WMHYNQTVDIWSVGCIMAELLTGRTLF 234
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL--- 572
+G+G GSV A G +AVKKL + S + + ++H N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 573 --KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
E + + + L +++ +++ + + R L+Y+H
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 147
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG 690
I+HR+ K +N+ + + D GLA + +++G++ T + Y APE
Sbjct: 148 -SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYVATRW-YRAPEIMLN 201
Query: 691 I--YTCQSDVYSFGVVMLELLTGRKSY 715
Y D++S G +M ELLTGR +
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL--- 572
+G+G GSV A G +AVKKL + S + + ++H N++ L
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 88
Query: 573 --KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
E + + + L +++ +++ + + R L+Y+H
Sbjct: 89 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 141
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG 690
I+HR+ K +N+ + + D GLA + +++G++ T + Y APE
Sbjct: 142 -SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYVATRW-YRAPEIMLN 195
Query: 691 I--YTCQSDVYSFGVVMLELLTGRKSY 715
Y D++S G +M ELLTGR +
Sbjct: 196 WMHYNQTVDIWSVGCIMAELLTGRTLF 222
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 90/205 (43%), Gaps = 14/205 (6%)
Query: 517 IGAGMLGSV---YRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELK 573
+G+G G+V Y K +AVK L A+ DE L N + ++ + IV +
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
G C E +L+ E G L L + +K+ I + + ++YL E
Sbjct: 73 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD----KNIIELVHQVSMGMKYLEE---S 124
Query: 634 PIVHRNFKSANIXXXXXXAVSVSDCGLAP-LISSGSVSQLSGHLLTAYGYGAPE-FESGI 691
VHR+ + N+ +SD GL+ L + + + H + APE
Sbjct: 125 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 184
Query: 692 YTCQSDVYSFGVVMLELLT-GRKSY 715
++ +SDV+SFGV+M E + G+K Y
Sbjct: 185 FSSKSDVWSFGVLMWEAFSYGQKPY 209
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL--- 572
+G+G GSV A G +AVKKL + S + + ++H N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 573 --KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
E + + + L +++ +++ + + R L+Y+H
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 162
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG 690
I+HR+ K +N+ + + D GLA + +++G++ T + Y APE
Sbjct: 163 -SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYVATRW-YRAPEIMLN 216
Query: 691 I--YTCQSDVYSFGVVMLELLTGRKSY 715
Y D++S G +M ELLTGR +
Sbjct: 217 WMHYNQTVDIWSVGCIMAELLTGRTLF 243
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 90/205 (43%), Gaps = 14/205 (6%)
Query: 517 IGAGMLGSV---YRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELK 573
+G+G G+V Y K +AVK L A+ DE L N + ++ + IV +
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
G C E +L+ E G L L + +K+ I + + ++YL E
Sbjct: 85 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD----KNIIELVHQVSMGMKYLEE---S 136
Query: 634 PIVHRNFKSANIXXXXXXAVSVSDCGLAP-LISSGSVSQLSGHLLTAYGYGAPE-FESGI 691
VHR+ + N+ +SD GL+ L + + + H + APE
Sbjct: 137 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 196
Query: 692 YTCQSDVYSFGVVMLELLT-GRKSY 715
++ +SDV+SFGV+M E + G+K Y
Sbjct: 197 FSSKSDVWSFGVLMWEAFSYGQKPY 221
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL--- 572
+G+G GSV A G +AVKKL + S + + ++H N++ L
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 87
Query: 573 --KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
E + + + L +++ +++ + + R L+Y+H
Sbjct: 88 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 140
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG 690
I+HR+ K +N+ + + D GLA + +++G++ T + Y APE
Sbjct: 141 -SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYVATRW-YRAPEIMLN 194
Query: 691 I--YTCQSDVYSFGVVMLELLTGRKSY 715
Y D++S G +M ELLTGR +
Sbjct: 195 WMHYNQTVDIWSVGCIMAELLTGRTLF 221
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL--- 572
+G+G GSV A G +AVKKL + S + + ++H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 573 --KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
E + + + L +++ +++ + + R L+Y+H
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 138
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG 690
I+HR+ K +N+ + + D GLA + +++G++ T + Y APE
Sbjct: 139 -SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYVATRW-YRAPEIMLN 192
Query: 691 I--YTCQSDVYSFGVVMLELLTGRKSY 715
Y D++S G +M ELLTGR +
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLTGRTLF 219
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 90/205 (43%), Gaps = 14/205 (6%)
Query: 517 IGAGMLGSV---YRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELK 573
+G+G G+V Y K +AVK L A+ DE L N + ++ + IV +
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
G C E +L+ E G L L + +K+ I + + ++YL E
Sbjct: 79 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD----KNIIELVHQVSMGMKYLEE---S 130
Query: 634 PIVHRNFKSANIXXXXXXAVSVSDCGLAP-LISSGSVSQLSGHLLTAYGYGAPE-FESGI 691
VHR+ + N+ +SD GL+ L + + + H + APE
Sbjct: 131 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 190
Query: 692 YTCQSDVYSFGVVMLELLT-GRKSY 715
++ +SDV+SFGV+M E + G+K Y
Sbjct: 191 FSSKSDVWSFGVLMWEAFSYGQKPY 215
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL--- 572
+G+G GSV A G +AVKKL + S + + ++H N++ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 573 --KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
E + + + L +++ +++ + + R L+Y+H
Sbjct: 87 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 139
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG 690
I+HR+ K +N+ + + D GLA + +++G++ T + Y APE
Sbjct: 140 -SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYVATRW-YRAPEIMLN 193
Query: 691 I--YTCQSDVYSFGVVMLELLTGRKSY 715
Y D++S G +M ELLTGR +
Sbjct: 194 WMHYNQTVDIWSVGCIMAELLTGRTLF 220
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL--- 572
+G+G GSV A G +AVKKL + S + + ++H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 573 --KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
E + + + L +++ +++ + + R L+Y+H
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQF-----LIYQILRGLKYIH-- 138
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG 690
I+HR+ K +N+ + + D GLA + +++G++ T + Y APE
Sbjct: 139 -SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYVATRW-YRAPEIMLN 192
Query: 691 I--YTCQSDVYSFGVVMLELLTGRKSY 715
Y D++S G +M ELLTGR +
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLTGRTLF 219
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL--- 572
+G+G GSV A G +AVKKL + S + + ++H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 573 --KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
E + + + L +++ +++ + + R L+Y+H
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 149
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG 690
I+HR+ K +N+ + + D GLA + +++G++ T + Y APE
Sbjct: 150 -SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYVATRW-YRAPEIMLN 203
Query: 691 I--YTCQSDVYSFGVVMLELLTGRKSY 715
Y D++S G +M ELLTGR +
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL--- 572
+G+G GSV A G +AVKKL + S + + ++H N++ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 573 --KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
E + + + L +++ +++ + + R L+Y+H
Sbjct: 109 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 161
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG 690
I+HR+ K +N+ + + D GLA + +++G++ T + Y APE
Sbjct: 162 -SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYVATRW-YRAPEIMLN 215
Query: 691 I--YTCQSDVYSFGVVMLELLTGRKSY 715
Y D++S G +M ELLTGR +
Sbjct: 216 WMHYNQTVDIWSVGCIMAELLTGRTLF 242
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 90/205 (43%), Gaps = 14/205 (6%)
Query: 517 IGAGMLGSV---YRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELK 573
+G+G G+V Y K +AVK L A+ DE L N + ++ + IV +
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
G C E +L+ E G L L + +K+ I + + ++YL E
Sbjct: 75 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD----KNIIELVHQVSMGMKYLEE---S 126
Query: 634 PIVHRNFKSANIXXXXXXAVSVSDCGLAP-LISSGSVSQLSGHLLTAYGYGAPE-FESGI 691
VHR+ + N+ +SD GL+ L + + + H + APE
Sbjct: 127 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 186
Query: 692 YTCQSDVYSFGVVMLELLT-GRKSY 715
++ +SDV+SFGV+M E + G+K Y
Sbjct: 187 FSSKSDVWSFGVLMWEAFSYGQKPY 211
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 90/205 (43%), Gaps = 14/205 (6%)
Query: 517 IGAGMLGSV---YRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELK 573
+G+G G+V Y K +AVK L A+ DE L N + ++ + IV +
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
G C E +L+ E G L L + +K+ I + + ++YL E
Sbjct: 79 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD----KNIIELVHQVSMGMKYLEE---S 130
Query: 634 PIVHRNFKSANIXXXXXXAVSVSDCGLAP-LISSGSVSQLSGHLLTAYGYGAPE-FESGI 691
VHR+ + N+ +SD GL+ L + + + H + APE
Sbjct: 131 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYK 190
Query: 692 YTCQSDVYSFGVVMLELLT-GRKSY 715
++ +SDV+SFGV+M E + G+K Y
Sbjct: 191 FSSKSDVWSFGVLMWEAFSYGQKPY 215
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL--- 572
+G+G GSV A G +AVKKL + S + + ++H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 573 --KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
E + + + L +++ +++ + + R L+Y+H
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 144
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG 690
I+HR+ K +N+ + + D GLA + +++G++ T + Y APE
Sbjct: 145 -SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYVATRW-YRAPEIMLN 198
Query: 691 I--YTCQSDVYSFGVVMLELLTGRKSY 715
Y D++S G +M ELLTGR +
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL--- 572
+G+G GSV A G +AVKKL + S + + ++H N++ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 573 --KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
E + + + L +++ +++ + + R L+Y+H
Sbjct: 113 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 165
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG 690
I+HR+ K +N+ + + D GLA + +++G++ T + Y APE
Sbjct: 166 -SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYVATRW-YRAPEIMLN 219
Query: 691 I--YTCQSDVYSFGVVMLELLTGRKSY 715
Y D++S G +M ELLTGR +
Sbjct: 220 WMHYNQTVDIWSVGCIMAELLTGRTLF 246
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL--- 572
+G+G GSV A G +AVKKL + S + + ++H N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 573 --KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
E + + + L +++ +++ + + R L+Y+H
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 147
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG 690
I+HR+ K +N+ + + D GLA + +++G++ T + Y APE
Sbjct: 148 -SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYVATRW-YRAPEIMLN 201
Query: 691 I--YTCQSDVYSFGVVMLELLTGRKSY 715
Y D++S G +M ELLTGR +
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL--- 572
+G+G GSV A G +AVKKL + S + + ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 573 --KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
E + + + L +++ +++ + + R L+Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 142
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG 690
I+HR+ K +N+ + + D GLA + +++G++ T + Y APE
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYVATRW-YRAPEIMLN 196
Query: 691 I--YTCQSDVYSFGVVMLELLTGRKSY 715
Y D++S G +M ELLTGR +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 109/277 (39%), Gaps = 43/277 (15%)
Query: 523 GSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC----AE 578
G +++ + G + VK L R S +K +F E + H N++ + G C A
Sbjct: 24 GELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAP 82
Query: 579 HGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHR 638
H LI + G+L ++LH + S ++ AL AR + +LH + P++ R
Sbjct: 83 HPT--LITHWMPYGSLYNVLHEGTNFVVDQS--QAVKFALDMARGMAFLHTL--EPLIPR 136
Query: 639 ---NFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEF----ESGI 691
N +S I +S++D + S G + A + APE
Sbjct: 137 HALNSRSVMIDEDMTARISMADVKFS-FQSPGR--------MYAPAWVAPEALQKKPEDT 187
Query: 692 YTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSLSGQ 751
+D++SF V++ EL+T + N V ++ L + P +S
Sbjct: 188 NRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVA--------LEGLRPTIPPGIS-- 237
Query: 752 YPAKSLSHFADIISRCVQSEPEFRPPMSEVVQDLVDM 788
H + ++ C+ +P RP +V L M
Sbjct: 238 ------PHVSKLMKICMNEDPAKRPKFDMIVPILEKM 268
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL--- 572
+G+G GSV A G +AVKKL + S + + ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 573 --KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
E + + + L +++ +++ + + R L+Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 142
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG 690
I+HR+ K +N+ + + D GLA + +++G++ T + Y APE
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDYGLA----RHTDDEMTGYVATRW-YRAPEIMLN 196
Query: 691 I--YTCQSDVYSFGVVMLELLTGRKSY 715
Y D++S G +M ELLTGR +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL--- 572
+G+G GSV A G +AVKKL + S + + ++H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 573 --KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
E + + + L +++ +++ + + R L+Y+H
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 144
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG 690
I+HR+ K +N+ + + D GLA + +++G++ T + Y APE
Sbjct: 145 -SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYVATRW-YRAPEIMLN 198
Query: 691 I--YTCQSDVYSFGVVMLELLTGRKSY 715
Y D++S G +M ELLTGR +
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 96/224 (42%), Gaps = 30/224 (13%)
Query: 501 IASLQQYTNSF---SQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLE 556
+ + Q NSF S+ ++G G G V++ + G LA K + R + +E
Sbjct: 78 VTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDK--EEVKN 135
Query: 557 LVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWN-TRIR 615
++ ++++ HAN+++L +L+ EY G L D + + S+N T +
Sbjct: 136 EISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDE-------SYNLTELD 188
Query: 616 MALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXA--VSVSDCGLAPLISSGSVSQLS 673
L + E + + Q I+H + K NI A + + D GLA +++
Sbjct: 189 TILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVN 248
Query: 674 GHLLTAYGYGAPEFES------GIYTCQSDVYSFGVVMLELLTG 711
+G PEF + + +D++S GV+ LL+G
Sbjct: 249 --------FGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSG 284
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 113/275 (41%), Gaps = 36/275 (13%)
Query: 516 LIGAGMLGSVYRAQLPDGK-LLAVKKLDKRASSQQKDDEFLELVNNIDR-IRHANIVELK 573
+G G + D K + A K + K + E + + +I R + H ++V
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 107
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
G+ ++ ++ E C +L ++ L + ++ LG +YLH +
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC----QYLH---RN 160
Query: 634 PIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESGI-Y 692
++HR+ K N+ V + D GLA + + L Y APE S +
Sbjct: 161 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD--GERKKVLCGTPNYIAPEVLSKKGH 218
Query: 693 TCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVR---WAIPQLHDIDALSRMVDPSLS 749
+ + DV+S G +M LL G+ ++ + + ++ ++IP + ++P
Sbjct: 219 SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIP---------KHINPVA- 268
Query: 750 GQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQD 784
A +I + +Q++P RP ++E++ D
Sbjct: 269 -----------ASLIQKMLQTDPTARPTINELLND 292
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL--- 572
+G+G GSV A G +AVKKL + S + + ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 573 --KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
E + + + L +++ +++ + + R L+Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 142
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG 690
I+HR+ K +N+ + + D GLA + +++G++ T + Y APE
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDGGLA----RHTDDEMTGYVATRW-YRAPEIMLN 196
Query: 691 I--YTCQSDVYSFGVVMLELLTGRKSY 715
Y D++S G +M ELLTGR +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 103 SSIRVIDLSNNHIGGSI-PSIL---PVTMQNFFLSDNQFSGSIPSSLATLTLLTDMSLNN 158
+S+ +DLS+N+ G I P++ T+Q +L +N F+G IP +L+ + L + L+
Sbjct: 368 ASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSF 427
Query: 159 NLLSGEIPDAFQSLTGLIXXXXXXXXXXGELPPSL 193
N LSG IP + SL+ L GE+P L
Sbjct: 428 NYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQEL 462
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Query: 105 IRVIDLSNNHIGGSIP-SILPVTMQNFF-LSDNQFSGSIPSSLATLTLLTDMSLNNNLLS 162
+ +++L +N I GSIP + + N LS N+ G IP +++ LT+LT++ L+NN LS
Sbjct: 658 LFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLS 717
Query: 163 GEIPDAFQ 170
G IP+ Q
Sbjct: 718 GPIPEMGQ 725
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 57/142 (40%), Gaps = 24/142 (16%)
Query: 102 FSSIRVIDLSNNHIGGSIPSILPV--TMQNFFLSDNQFSGSIPSSLATLTLLTDMSLNNN 159
S +R + L N + G IP L T++ L N +G IPS L+ T L +SL+NN
Sbjct: 441 LSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNN 500
Query: 160 LLSGEIPDAFQSLTGLIXXXXXXXXXXGELPPSLEXXXXXXXXXXXXXXXXGTLDVLQDL 219
L+GEIP L L G +P L + L
Sbjct: 501 RLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGD--------------------CRSL 540
Query: 220 PLRDLNIENNLFSGPIPEKMLQ 241
DLN NLF+G IP M +
Sbjct: 541 IWLDLNT--NLFNGTIPAAMFK 560
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 103 SSIRVIDLSNNHIGGSIPSILPVTMQNFF---LSDNQFSGSIPSSLATLTLLTDMSLNNN 159
+++ I LSNN + G IP + ++N LS+N FSG+IP+ L L + LN N
Sbjct: 490 TNLNWISLSNNRLTGEIPKWIG-RLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTN 548
Query: 160 LLSGEIPDAFQSLTGLI 176
L +G IP A +G I
Sbjct: 549 LFNGTIPAAMFKQSGKI 565
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Query: 104 SIRVIDLSNNHIGGSIPSILPVTMQNFF---LSDNQFSGSIPSSLATLTLLTDMSLNNNL 160
S+ +D+S N + G IP + +M F L N SGSIP + L L + L++N
Sbjct: 633 SMMFLDMSYNMLSGYIPKEIG-SMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNK 691
Query: 161 LSGEIPDAFQSLTGLIXXXXXXXXXXGELP 190
L G IP A +LT L G +P
Sbjct: 692 LDGRIPQAMSALTMLTEIDLSNNNLSGPIP 721
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 60/144 (41%), Gaps = 25/144 (17%)
Query: 104 SIRVIDLSNNHIGGSIPSILPV---TMQNFFLSDNQFSGSIPSSLATLTLLTDMSLNNNL 160
S++ + L+ N G IP L T+ LS N F G++P + +LL ++L++N
Sbjct: 270 SLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNN 329
Query: 161 LSGEIP-DAFQSLTGLIXXXXXXXXXXGELPPSLEXXXXXXXXXXXXXXXXGTLDVLQDL 219
SGE+P D + GL GELP SL
Sbjct: 330 FSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSAS-------------------- 369
Query: 220 PLRDLNIENNLFSGPIPEKMLQIP 243
L L++ +N FSGPI + Q P
Sbjct: 370 -LLTLDLSSNNFSGPILPNLCQNP 392
Score = 36.6 bits (83), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 43/106 (40%), Gaps = 22/106 (20%)
Query: 132 LSDNQFSGSIPSSLATLTLLTDMSLNNNLLSGEIPDAFQSLTGLIXXXXXXXXXXGELPP 191
+S N SG IP + ++ L ++L +N +SG IPD L GL G +P
Sbjct: 639 MSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQ 698
Query: 192 SLEXXXXXXXXXXXXXXXXGTLDVLQDLPLRDLNIENNLFSGPIPE 237
++ L ++++ NN SGPIPE
Sbjct: 699 AMSALTM----------------------LTEIDLSNNNLSGPIPE 722
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL--- 572
+G+G GSV A G +AVKKL + S + + ++H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 573 --KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
E + + + L +++ +++ + + R L+Y+H
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 148
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG 690
I+HR+ K +N+ + + D GLA + +++G++ T + Y APE
Sbjct: 149 -SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYVATRW-YRAPEIMLN 202
Query: 691 I--YTCQSDVYSFGVVMLELLTGRKSY 715
Y D++S G +M ELLTGR +
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 113/275 (41%), Gaps = 36/275 (13%)
Query: 516 LIGAGMLGSVYRAQLPDGK-LLAVKKLDKRASSQQKDDEFLELVNNIDR-IRHANIVELK 573
+G G + D K + A K + K + E + + +I R + H ++V
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 105
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
G+ ++ ++ E C +L ++ L + ++ LG +YLH +
Sbjct: 106 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC----QYLH---RN 158
Query: 634 PIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESGI-Y 692
++HR+ K N+ V + D GLA + + L Y APE S +
Sbjct: 159 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD--GERKKVLCGTPNYIAPEVLSKKGH 216
Query: 693 TCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVR---WAIPQLHDIDALSRMVDPSLS 749
+ + DV+S G +M LL G+ ++ + + ++ ++IP + ++P
Sbjct: 217 SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIP---------KHINPVA- 266
Query: 750 GQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQD 784
A +I + +Q++P RP ++E++ D
Sbjct: 267 -----------ASLIQKMLQTDPTARPTINELLND 290
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL--- 572
+G+G GSV A G +AVKKL + S + + ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 573 --KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
E + + + L +++ +++ + + R L+Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 142
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG 690
I+HR+ K +N+ + + D GLA + +++G++ T + Y APE
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDRGLA----RHTDDEMTGYVATRW-YRAPEIMLN 196
Query: 691 I--YTCQSDVYSFGVVMLELLTGRKSY 715
Y D++S G +M ELLTGR +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 90/210 (42%), Gaps = 26/210 (12%)
Query: 517 IGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
IG G G V++A+ G+ +A+KK+ + L + + ++H N+V L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 576 CAEHGQRL--------LIYEYCSN---GTLQDMLHSDDELKNNLSWNTRIRMALGAARAL 624
C L++++C + G L ++L +K LS R+ L L
Sbjct: 86 CRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVL-----VKFTLSEIKRVMQML--LNGL 138
Query: 625 EYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHL--LTAYGY 682
Y+H + I+HR+ K+AN+ + ++D GLA S SQ + + + Y
Sbjct: 139 YYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 683 GAPEFESGI--YTCQSDVYSFGVVMLELLT 710
PE G Y D++ G +M E+ T
Sbjct: 196 RPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL--- 572
+G+G GSV A G +AVKKL + S + + ++H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 573 --KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
E + + + L +++ +++ + + R L+Y+H
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 148
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG 690
I+HR+ K +N+ + + D GLA + +++G++ T + Y APE
Sbjct: 149 -SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYVATRW-YRAPEIMLN 202
Query: 691 I--YTCQSDVYSFGVVMLELLTGRKSY 715
Y D++S G +M ELLTGR +
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 87/207 (42%), Gaps = 21/207 (10%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL--- 572
+G+G GSV A G +AVKKL + S + + ++H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 573 --KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
E + + + L +++ +++ + + R L+Y+H
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 138
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG 690
I+HR+ K +N+ + + D GLA + +++G + T + Y APE
Sbjct: 139 -SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMAGFVATRW-YRAPEIMLN 192
Query: 691 I--YTCQSDVYSFGVVMLELLTGRKSY 715
Y D++S G +M ELLTGR +
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLTGRTLF 219
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 87/207 (42%), Gaps = 21/207 (10%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL--- 572
+G+G GSV A G +AVKKL + S + + ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 573 --KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
E + + + L +++ +++ + + R L+Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 142
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG 690
I+HR+ K +N+ + + D GLA + +++G + T + Y APE
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMAGFVATRW-YRAPEIMLN 196
Query: 691 I--YTCQSDVYSFGVVMLELLTGRKSY 715
Y D++S G +M ELLTGR +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 79/163 (48%), Gaps = 21/163 (12%)
Query: 516 LIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIR-HANIVELK 573
++ G VY AQ + G+ A+K+L ++ ++K+ ++ V + ++ H NIV+
Sbjct: 35 VLAEGGFAFVYEAQDVGSGREYALKRL--LSNEEEKNRAIIQEVCFMKKLSGHPNIVQ-- 90
Query: 574 GYCAE-----------HGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAAR 622
+C+ + LL+ E C G L + L E + LS +T +++ R
Sbjct: 91 -FCSAASIGKEESDTGQAEFLLLTELC-KGQLVEFL-KKMESRGPLSCDTVLKIFYQTCR 147
Query: 623 ALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS 665
A++++H +PPI+HR+ K N+ + + D G A IS
Sbjct: 148 AVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTIS 189
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 93/226 (41%), Gaps = 28/226 (12%)
Query: 503 SLQQYTNSFSQENLIGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLEL---- 557
S + ++ + ++G G+ V R P K AVK +D +E EL
Sbjct: 11 STHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREAT 70
Query: 558 VNNIDRIR----HANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTR 613
+ +D +R H NI++LK + L+++ G L D L K LS
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE----KVTLSEKET 126
Query: 614 IRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSG-SVSQL 672
++ + LH++ IVHR+ K NI + ++D G + + G + ++
Sbjct: 127 RKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREV 183
Query: 673 SGHLLTAYGYGAPE-FESGI------YTCQSDVYSFGVVMLELLTG 711
G Y APE E + Y + D++S GV+M LL G
Sbjct: 184 CG----TPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 87/207 (42%), Gaps = 21/207 (10%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL--- 572
+G+G GSV A G +AVKKL + S + + ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 573 --KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
E + + + L +++ +++ + + R L+Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 142
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG 690
I+HR+ K +N+ + + D GLA + +++G + T + Y APE
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMAGFVATRW-YRAPEIMLN 196
Query: 691 I--YTCQSDVYSFGVVMLELLTGRKSY 715
Y D++S G +M ELLTGR +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 95/221 (42%), Gaps = 27/221 (12%)
Query: 500 TIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKL---LAVKKLDKRASSQQKDDEFLE 556
T L++Y N IG+G G V A D L +A+KKL + +Q
Sbjct: 19 TFTVLKRYQNL----KPIGSGAQGIVVAAY--DAILERNVAIKKLSRPFQNQTHAKRAYR 72
Query: 557 LVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRI-- 614
+ + + H NI+ L S QD+ + + NLS ++
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQK---------SLEEFQDVYIVMELMDANLSQVIQMEL 123
Query: 615 ---RMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQ 671
RM+ + L + + I+HR+ K +NI + + D GLA ++G+
Sbjct: 124 DHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFM 181
Query: 672 LSGHLLTAYGYGAPEFESGI-YTCQSDVYSFGVVMLELLTG 711
++ +++T Y Y APE G+ Y D++S GV+M E++ G
Sbjct: 182 MTPYVVTRY-YRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 87/207 (42%), Gaps = 21/207 (10%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL--- 572
+G+G GSV A G +AVKKL + S + + ++H N++ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 573 --KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
E + + + L +++ +++ + + R L+Y+H
Sbjct: 113 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 165
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG 690
I+HR+ K +N+ + + D GLA + ++ G++ T + Y APE
Sbjct: 166 -SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMXGYVATRW-YRAPEIMLN 219
Query: 691 I--YTCQSDVYSFGVVMLELLTGRKSY 715
Y D++S G +M ELLTGR +
Sbjct: 220 WMHYNQTVDIWSVGCIMAELLTGRTLF 246
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 113/275 (41%), Gaps = 36/275 (13%)
Query: 516 LIGAGMLGSVYRAQLPDGK-LLAVKKLDKRASSQQKDDEFLELVNNIDR-IRHANIVELK 573
+G G + D K + A K + K + E + + +I R + H ++V
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 81
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
G+ ++ ++ E C +L ++ L + ++ LG +YLH +
Sbjct: 82 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC----QYLH---RN 134
Query: 634 PIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESGI-Y 692
++HR+ K N+ V + D GLA + + L Y APE S +
Sbjct: 135 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD--GERKKVLCGTPNYIAPEVLSKKGH 192
Query: 693 TCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVR---WAIPQLHDIDALSRMVDPSLS 749
+ + DV+S G +M LL G+ ++ + + ++ ++IP + ++P
Sbjct: 193 SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIP---------KHINPVA- 242
Query: 750 GQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQD 784
A +I + +Q++P RP ++E++ D
Sbjct: 243 -----------ASLIQKMLQTDPTARPTINELLND 266
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 89/210 (42%), Gaps = 36/210 (17%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
+G G G VY+A + +A+K++ + + V+ + ++H NI+ELK
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKS- 100
Query: 576 CAEHGQRL-LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI--CQ 632
H RL LI+EY N +LK + N + M + + + ++ + C
Sbjct: 101 VIHHNHRLHLIFEYAEN-----------DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCH 149
Query: 633 P-PIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGS----------VSQLSGHLLTAYG 681
+HR+ K N+ +SVSD P++ G + Q + ++T +
Sbjct: 150 SRRCLHRDLKPQNLL------LSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLW- 202
Query: 682 YGAPEFESGI--YTCQSDVYSFGVVMLELL 709
Y PE G Y+ D++S + E+L
Sbjct: 203 YRPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 95/221 (42%), Gaps = 27/221 (12%)
Query: 500 TIASLQQYTNSFSQENLIGAGMLGSV---YRAQLPDGKLLAVKKLDKRASSQQKDDEFLE 556
T L++Y N IG+G G V Y A L +A+KKL + +Q
Sbjct: 19 TFTVLKRYQNL----KPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR 72
Query: 557 LVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRI-- 614
+ + + H NI+ L S QD+ + + NLS ++
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQK---------SLEEFQDVYIVMELMDANLSQVIQMEL 123
Query: 615 ---RMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQ 671
RM+ + L + + I+HR+ K +NI + + D GLA ++G+
Sbjct: 124 DHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFM 181
Query: 672 LSGHLLTAYGYGAPEFESGI-YTCQSDVYSFGVVMLELLTG 711
++ +++T Y Y APE G+ Y D++S GV+M E++ G
Sbjct: 182 MTPYVVTRY-YRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 82/211 (38%), Gaps = 17/211 (8%)
Query: 511 FSQENLIGAGMLGSVYRAQLPD-GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
F ++G G G V+ A+ + A+K L K D E + + + +
Sbjct: 19 FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 78
Query: 570 VELKGYCAEHGQRLLIY--EYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
+C + L + EY + G L M H K +LS R AA + L
Sbjct: 79 FLTHMFCTFQTKENLFFVMEYLNGGDL--MYHIQSCHKFDLS-----RATFYAAEIILGL 131
Query: 628 HEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAP--LISSGSVSQLSGHLLTAYGYGAP 685
+ IV+R+ K NI + ++D G+ ++ + G Y AP
Sbjct: 132 QFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCG----TPDYIAP 187
Query: 686 EFESG-IYTCQSDVYSFGVVMLELLTGRKSY 715
E G Y D +SFGV++ E+L G+ +
Sbjct: 188 EILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 218
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 11/109 (10%)
Query: 621 ARALEYLHEIC-------QPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLS 673
ARA+ Y EIC + IV+R+ K NI + +SD GLA + G +
Sbjct: 286 ARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT--IK 343
Query: 674 GHLLTAYGYGAPE-FESGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNR 721
G + T GY APE ++ YT D ++ G ++ E++ G+ + + + +
Sbjct: 344 GRVGTV-GYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKK 391
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 87/207 (42%), Gaps = 21/207 (10%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL--- 572
+G+G GSV A G +AVKKL + S + + ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 573 --KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
E + + + L +++ +++ + + R L+Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 142
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG 690
I+HR+ K +N+ + + D GLA + +++G + T + Y APE
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGXVATRW-YRAPEIMLN 196
Query: 691 I--YTCQSDVYSFGVVMLELLTGRKSY 715
Y D++S G +M ELLTGR +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 92/222 (41%), Gaps = 28/222 (12%)
Query: 507 YTNSFSQENLIGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLEL----VNNI 561
+ ++ + ++G G+ V R P K AVK +D +E EL + +
Sbjct: 2 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEV 61
Query: 562 DRIR----HANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMA 617
D +R H NI++LK + L+++ G L D L K LS ++
Sbjct: 62 DILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE----KVTLSEKETRKIM 117
Query: 618 LGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSG-SVSQLSGHL 676
+ LH++ IVHR+ K NI + ++D G + + G + ++ G
Sbjct: 118 RALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCG-- 172
Query: 677 LTAYGYGAPE-FESGI------YTCQSDVYSFGVVMLELLTG 711
Y APE E + Y + D++S GV+M LL G
Sbjct: 173 --TPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 11/109 (10%)
Query: 621 ARALEYLHEIC-------QPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLS 673
ARA+ Y EIC + IV+R+ K NI + +SD GLA + G +
Sbjct: 286 ARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT--IK 343
Query: 674 GHLLTAYGYGAPE-FESGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNR 721
G + T GY APE ++ YT D ++ G ++ E++ G+ + + + +
Sbjct: 344 GRVGTV-GYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKK 391
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 117/300 (39%), Gaps = 45/300 (15%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKR--ASSQQ--KDDEFLELVNNIDRIRHANIVE 571
+G+G V + Q GK A K + KR SS++ +E VN + IRH NI+
Sbjct: 34 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIIT 93
Query: 572 LKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEIC 631
L +LI E S G L D L K +L+ + + + YLH
Sbjct: 94 LHDIFENKTDVVLILELVSGGELFDFLAE----KESLTEDEATQFLKQILDGVHYLH--- 146
Query: 632 QPPIVHRNFKSANIXXXXXXA----VSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEF 687
I H + K NI + + D G+A I +G+ + +G PEF
Sbjct: 147 SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFK--------NIFGTPEF 198
Query: 688 ---ESGIYT---CQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDALS 741
E Y ++D++S GV+ LL+G FL L +I A
Sbjct: 199 VAPEIVNYEPLGLEADMWSIGVITYILLSG----------ASPFLGETKQETLTNISA-- 246
Query: 742 RMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQ-DLVDMIRRERCSNESLG 800
V+ +Y + + D I R + +P+ R +++ ++ + IRR E G
Sbjct: 247 --VNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHSWIKAIRRRNVRGEDSG 304
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 86/207 (41%), Gaps = 21/207 (10%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL--- 572
+G+G GSV A G +AVKKL + S + + ++H N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 573 --KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
E + + + L +++ +++ + + R L+Y+H
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 162
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG 690
I+HR+ K +N+ + + D GLA + ++ G + T + Y APE
Sbjct: 163 -SADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMXGXVATRW-YRAPEIMLN 216
Query: 691 I--YTCQSDVYSFGVVMLELLTGRKSY 715
Y D++S G +M ELLTGR +
Sbjct: 217 WMHYNQTVDIWSVGCIMAELLTGRTLF 243
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 134/312 (42%), Gaps = 55/312 (17%)
Query: 508 TNSFS---------QENLIGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLEL 557
T+SFS QE+++G G V L + AVK ++K+ + F E+
Sbjct: 3 TDSFSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPG-HIRSRVFREV 61
Query: 558 VNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMA 617
H N++EL + E + L++E G++ +H N L + ++
Sbjct: 62 EMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHF-NELEASVVVQ-- 118
Query: 618 LGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVS---VSDCGLAPLIS-SGSVSQLS 673
A AL++LH I HR+ K NI VS + D GL I +G S +S
Sbjct: 119 -DVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPIS 174
Query: 674 G-HLLTAYG---YGAPEF------ESGIYTCQSDVYSFGVVMLELLT------GRKSYDR 717
LLT G Y APE E+ IY + D++S GV++ LL+ GR D
Sbjct: 175 TPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDC 234
Query: 718 TRNRGEQFLVRWAIPQLHDIDALSRMVDPSLSGQY--PAKSLSHFA----DIISRCVQSE 771
+RGE A P ++ + + G+Y P K +H + D+IS+ + +
Sbjct: 235 GWDRGE------ACPACQNM-----LFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRD 283
Query: 772 PEFRPPMSEVVQ 783
+ R ++V+Q
Sbjct: 284 AKQRLSAAQVLQ 295
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 517 IGAGMLGSVYRAQLPDG-KLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
IG G G+V++A+ + +++A+K++ + L + + ++H NIV L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 576 CAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPI 635
+ L++E+C QD+ D +L + L + H +
Sbjct: 70 LHSDKKLTLVFEFCD----QDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH---SRNV 122
Query: 636 VHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE--FESGIYT 693
+HR+ K N+ + ++D GLA V S ++T + Y P+ F + +Y+
Sbjct: 123 LHRDLKPQNLLINRNGELKLADFGLARAFGI-PVRCYSAEVVTLW-YRPPDVLFGAKLYS 180
Query: 694 CQSDVYSFGVVMLEL 708
D++S G + EL
Sbjct: 181 TSIDMWSAGCIFAEL 195
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 72/164 (43%), Gaps = 11/164 (6%)
Query: 558 VNNIDRIRHANIVELKG--YCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIR 615
+ + R+RH N+++L Y E + ++ EYC G +Q+ML S E + +
Sbjct: 57 IQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYF 115
Query: 616 MALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGH 675
L LEYLH IVH++ K N+ + +S G+A + +
Sbjct: 116 CQL--IDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRT 170
Query: 676 LLTAYGYGAPEFESGIYT---CQSDVYSFGVVMLELLTGRKSYD 716
+ + PE +G+ T + D++S GV + + TG ++
Sbjct: 171 SQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFE 214
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 92/226 (40%), Gaps = 28/226 (12%)
Query: 503 SLQQYTNSFSQENLIGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLEL---- 557
S + ++ + ++G G+ V R P K AVK +D +E EL
Sbjct: 11 STHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREAT 70
Query: 558 VNNIDRIR----HANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTR 613
+ +D +R H NI++LK + L+++ G L D L K LS
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE----KVTLSEKET 126
Query: 614 IRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSG-SVSQL 672
++ + LH++ IVHR+ K NI + ++D G + + G + +
Sbjct: 127 RKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSV 183
Query: 673 SGHLLTAYGYGAPE-FESGI------YTCQSDVYSFGVVMLELLTG 711
G Y APE E + Y + D++S GV+M LL G
Sbjct: 184 CG----TPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 90/207 (43%), Gaps = 15/207 (7%)
Query: 510 SFSQENLIGAGMLGSVYR--AQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
++ + + +G G +VY+ ++L D L+A+K++ E V+ + ++HA
Sbjct: 3 TYIKLDKLGEGTYATVYKGKSKLTDN-LVALKEIRLEHEEGAPCTAIRE-VSLLKDLKHA 60
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
NIV L L++EY +D+ D+ N ++ + R L Y
Sbjct: 61 NIVTLHDIIHTEKSLTLVFEYLD----KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYC 116
Query: 628 HEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEF 687
H + ++HR+ K N+ + ++D GLA S ++T + Y P+
Sbjct: 117 H---RQKVLHRDLKPQNLLINERGELKLADFGLAR-AKSIPTKTYDNEVVTLW-YRPPDI 171
Query: 688 ESGI--YTCQSDVYSFGVVMLELLTGR 712
G Y+ Q D++ G + E+ TGR
Sbjct: 172 LLGSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 102/247 (41%), Gaps = 41/247 (16%)
Query: 508 TNSFSQENLIGAGMLGSVYRA-QLPDGKLLAVKKL---DKRASSQQKDDEFLELVNNIDR 563
++ F ++L+G G G V A P G+++A+KK+ DK + + L + +
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT----LREIKILKH 65
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLH--------SDDELKNNLSWNTRIR 615
+H NI+ + Y +Q LH SDD ++
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQ---------Y 116
Query: 616 MALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS---------S 666
RA++ LH ++HR+ K +N+ + V D GLA +I +
Sbjct: 117 FIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPT 173
Query: 667 GSVSQLSGHLLTAYGYGAPE--FESGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQ 724
G S ++ ++ T + Y APE S Y+ DV+S G ++ EL R + R+ Q
Sbjct: 174 GQQSGMTEYVATRW-YRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFP-GRDYRHQ 231
Query: 725 FLVRWAI 731
L+ + I
Sbjct: 232 LLLIFGI 238
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 85/207 (41%), Gaps = 20/207 (9%)
Query: 517 IGAGMLGSVYRAQLPD-GKLLAVKKLDKRASSQQKD--DEFLELVNNIDRIRHANIVELK 573
IG G G V Q D K+ A+K ++K+ ++ + + F EL + + H +V L
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKEL-QIMQGLEHPFLVNLW 81
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
+ ++ + G L+ L + K T AL+YL
Sbjct: 82 YSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEE----TVKLFICELVMALDYLQ---NQ 134
Query: 634 PIVHRNFKSANIXXXXXXAVSVSDCGLAPLI-SSGSVSQLSGHLLTAYGYGAPEFESGI- 691
I+HR+ K NI V ++D +A ++ ++ ++G Y APE S
Sbjct: 135 RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAG----TKPYMAPEMFSSRK 190
Query: 692 ---YTCQSDVYSFGVVMLELLTGRKSY 715
Y+ D +S GV ELL GR+ Y
Sbjct: 191 GAGYSFAVDWWSLGVTAYELLRGRRPY 217
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 134/340 (39%), Gaps = 67/340 (19%)
Query: 479 EGTAVKTSTKTAKPFTTARSFTIASLQQ-YTNSFSQENLIGAGMLGSVYRAQLPDGKLLA 537
E K ++ K +R I + +Q N E ++G G G+V G+ +A
Sbjct: 2 EKKKRKRGSRGGKKGRKSRIANIPNFEQSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVA 61
Query: 538 VKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLI--YEYCSNGTLQ 595
V KR D +E+ + H N++ + YC+E R L E C N LQ
Sbjct: 62 V----KRMLIDFCDIALMEIKLLTESDDHPNVI--RYYCSETTDRFLYIALELC-NLNLQ 114
Query: 596 DMLH----SDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXX 651
D++ SD+ LK +N I + A + +LH + I+HR+ K NI
Sbjct: 115 DLVESKNVSDENLKLQKEYNP-ISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSS 170
Query: 652 AVS-------------VSDCGLAPLISSG------SVSQLSGHLLTAYGYGAPEF--ESG 690
+ +SD GL + SG +++ SG G+ APE ES
Sbjct: 171 RFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSG----TSGWRAPELLEEST 226
Query: 691 I--YTCQSDVYSFGVVMLELLTGRK-----SYDRTRNRGEQFLVRWAIPQLHDIDALSRM 743
T D++S G V +L+ K Y R N I + +D + +
Sbjct: 227 KRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESN---------IIRGIFSLDEMKCL 277
Query: 744 VDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQ 783
D SL ++ D+IS+ + +P RP +V++
Sbjct: 278 HDRSL--------IAEATDLISQMIDHDPLKRPTAMKVLR 309
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 125/298 (41%), Gaps = 50/298 (16%)
Query: 515 NLIGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELK 573
L+G G V A L +GK AVK ++K+A + F E+ + NI+EL
Sbjct: 19 ELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAG-HSRSRVFREVETLYQCQGNKNILELI 77
Query: 574 GYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTR--IRMALGAARALEYLHEIC 631
+ + + L++E G++ + H ++ +N R R+ A AL++LH
Sbjct: 78 EFFEDDTRFYLVFEKLQGGSI--LAH----IQKQKHFNEREASRVVRDVAAALDFLH--- 128
Query: 632 QPPIVHRNFKSANIXXXXXXAVSVS-----DCGLAPLISSGSVSQLSGHLLTAYG---YG 683
I HR+ K NI VS D G +++ + L T G Y
Sbjct: 129 TKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYM 188
Query: 684 APEF------ESGIYTCQSDVYSFGVVMLELLTGRKSY------DRTRNRGEQFLVRWAI 731
APE ++ Y + D++S GVV+ +L+G + D +RGE V
Sbjct: 189 APEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRV---- 244
Query: 732 PQLHDIDALSRMVDPSLSGQY--PAKSLSHFA----DIISRCVQSEPEFRPPMSEVVQ 783
+++ + G+Y P K +H + D+IS+ + + + R ++V+Q
Sbjct: 245 -------CQNKLFESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQ 295
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 94/219 (42%), Gaps = 34/219 (15%)
Query: 508 TNSFSQENLIGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRI-R 565
T+ + IG G V R +L G A K ++ + S +D + LE I R+ +
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSA-RDHQKLEREARICRLLK 61
Query: 566 HANIVELKGYCAEHGQRLLIYEYCSNGTL-QDMLHSDDELKNNLSWNTRIRMALGAARAL 624
H+NIV L +E G L+++ + G L +D++ + + + S + + L
Sbjct: 62 HSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQ--------QIL 113
Query: 625 EYLHEICQPPIVHRNFKSANIXXXXX---XAVSVSDCGLAPLIS---------SGSVSQL 672
E + Q +VHR+ K N+ AV ++D GLA + +G+ L
Sbjct: 114 EAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYL 173
Query: 673 SGHLLTAYGYGAPEFESGIYTCQSDVYSFGVVMLELLTG 711
S +L YG P D+++ GV++ LL G
Sbjct: 174 SPEVLRKEAYGKP----------VDIWACGVILYILLVG 202
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 91/227 (40%), Gaps = 39/227 (17%)
Query: 509 NSFSQENL---------IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKD----DEF 554
++F QE++ +G+G V + Q GK A K + KR S + +E
Sbjct: 3 STFRQEDVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEI 62
Query: 555 LELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRI 614
VN + IRH NI+ L +LI E S G L D L K +L+ +
Sbjct: 63 EREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAE----KESLTEDEAT 118
Query: 615 RMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXA----VSVSDCGLAPLISSGSVS 670
+ + YLH I H + K NI + + D G+A I +G+
Sbjct: 119 QFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF 175
Query: 671 QLSGHLLTAYGYGAPEF---ESGIYT---CQSDVYSFGVVMLELLTG 711
+ +G PEF E Y ++D++S GV+ LL+G
Sbjct: 176 K--------NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 99/246 (40%), Gaps = 39/246 (15%)
Query: 508 TNSFSQENLIGAGMLGSVYRA-QLPDGKLLAVKKL---DKRASSQQKDDEFLELVNNIDR 563
++ F ++L+G G G V A P G+++A+KK+ DK + + L + +
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT----LREIKILKH 65
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLH--------SDDELKNNLSWNTRIR 615
+H NI+ + Y +Q LH SDD ++
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQ---------Y 116
Query: 616 MALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI------SSGSV 669
RA++ LH ++HR+ K +N+ + V D GLA +I +S
Sbjct: 117 FIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPT 173
Query: 670 SQLSG--HLLTAYGYGAPE--FESGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQF 725
Q SG + Y APE S Y+ DV+S G ++ EL R + R+ Q
Sbjct: 174 GQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFP-GRDYRHQL 232
Query: 726 LVRWAI 731
L+ + I
Sbjct: 233 LLIFGI 238
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 86/205 (41%), Gaps = 14/205 (6%)
Query: 507 YTNSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKK-LDKRASSQQKDDEFLELVNNIDRI 564
+ SF + + +G G G V++ + DG+L AVK+ + + + + E+ ++
Sbjct: 55 FQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVG 114
Query: 565 RHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARAL 624
+H V L+ E G L E C Q L W +R L AL
Sbjct: 115 QHPCCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGY-LRDTL---LAL 170
Query: 625 EYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTA-YGYG 683
+LH +VH + K ANI + D GL L+ G+ +G + Y
Sbjct: 171 AHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGL--LVELGTAG--AGEVQEGDPRYM 223
Query: 684 APEFESGIYTCQSDVYSFGVVMLEL 708
APE G Y +DV+S G+ +LE+
Sbjct: 224 APELLQGSYGTAADVFSLGLTILEV 248
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 134/340 (39%), Gaps = 67/340 (19%)
Query: 479 EGTAVKTSTKTAKPFTTARSFTIASLQQ-YTNSFSQENLIGAGMLGSVYRAQLPDGKLLA 537
E K ++ K +R I + +Q N E ++G G G+V G+ +A
Sbjct: 2 EKKKRKRGSRGGKKGRKSRIANIPNFEQSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVA 61
Query: 538 VKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLI--YEYCSNGTLQ 595
V KR D +E+ + H N++ + YC+E R L E C N LQ
Sbjct: 62 V----KRMLIDFCDIALMEIKLLTESDDHPNVI--RYYCSETTDRFLYIALELC-NLNLQ 114
Query: 596 DMLH----SDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXX 651
D++ SD+ LK +N I + A + +LH + I+HR+ K NI
Sbjct: 115 DLVESKNVSDENLKLQKEYNP-ISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSS 170
Query: 652 AVS-------------VSDCGLAPLISSG------SVSQLSGHLLTAYGYGAPEF--ESG 690
+ +SD GL + SG +++ SG G+ APE ES
Sbjct: 171 RFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSG----TSGWRAPELLEEST 226
Query: 691 I--YTCQSDVYSFGVVMLELLTGRK-----SYDRTRNRGEQFLVRWAIPQLHDIDALSRM 743
T D++S G V +L+ K Y R N I + +D + +
Sbjct: 227 KRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESN---------IIRGIFSLDEMKCL 277
Query: 744 VDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQ 783
D SL ++ D+IS+ + +P RP +V++
Sbjct: 278 HDRSL--------IAEATDLISQMIDHDPLKRPTAMKVLR 309
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 124/309 (40%), Gaps = 54/309 (17%)
Query: 505 QQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRI 564
Q N E ++G G G+V G+ +AV KR D +E+ +
Sbjct: 11 QSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAV----KRMLIDFCDIALMEIKLLTESD 66
Query: 565 RHANIVELKGYCAEHGQRLLI--YEYCSNGTLQDMLH----SDDELKNNLSWNTRIRMAL 618
H N++ + YC+E R L E C N LQD++ SD+ LK +N I +
Sbjct: 67 DHPNVI--RYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNP-ISLLR 122
Query: 619 GAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVS-------------VSDCGLAPLIS 665
A + +LH + I+HR+ K NI + +SD GL +
Sbjct: 123 QIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD 179
Query: 666 SGSVS---QLSGHLLTAYGYGAPEFESGIYTCQS--------DVYSFGVVMLELLTGRKS 714
SG S L+ T+ G+ APE Q+ D++S G V +L+ K
Sbjct: 180 SGQSSFRTNLNNPSGTS-GWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKH 238
Query: 715 YDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEF 774
+ E ++R + +D + + D SL ++ D+IS+ + +P
Sbjct: 239 PFGDKYSRESNIIR----GIFSLDEMKCLHDRSL--------IAEATDLISQMIDHDPLK 286
Query: 775 RPPMSEVVQ 783
RP +V++
Sbjct: 287 RPTAMKVLR 295
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 95/228 (41%), Gaps = 29/228 (12%)
Query: 506 QYTNSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRI 564
+Y F +G G G V+ A+ D A+K++ + + + ++ + V + ++
Sbjct: 2 RYLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRI-RLPNRELAREKVMREVKALAKL 60
Query: 565 RHANIVE-----LKGYCAEHGQ----RLLIY---EYCSNGTLQDMLHSDDELKNNLSWNT 612
H IV L+ E Q ++ +Y + C L+D ++ ++ +
Sbjct: 61 EHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEER-ERSV 119
Query: 613 RIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQL 672
+ + L A A+E+LH ++HR+ K +NI V V D GL + Q
Sbjct: 120 CLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQT 176
Query: 673 SGHLLTAYG----------YGAPE-FESGIYTCQSDVYSFGVVMLELL 709
+ AY Y +PE Y+ + D++S G+++ ELL
Sbjct: 177 VLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 87/207 (42%), Gaps = 21/207 (10%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL--- 572
+G+G GSV A G +AVKKL + S + + ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 573 --KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
E + + + L +++ +++ + + R L+Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 142
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG 690
I+HR+ K +N+ + + D LA + +++G++ T + Y APE
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILDFYLA----RHTDDEMTGYVATRW-YRAPEIMLN 196
Query: 691 I--YTCQSDVYSFGVVMLELLTGRKSY 715
Y D++S G +M ELLTGR +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 101/247 (40%), Gaps = 41/247 (16%)
Query: 508 TNSFSQENLIGAGMLGSVYRA-QLPDGKLLAVKKL---DKRASSQQKDDEFLELVNNIDR 563
++ F ++L+G G G V A P G+++A+KK+ DK + + L + +
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT----LREIKILKH 65
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLH--------SDDELKNNLSWNTRIR 615
+H NI+ + Y +Q LH SDD ++
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQ---------Y 116
Query: 616 MALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS---------S 666
RA++ LH ++HR+ K +N+ + V D GLA +I +
Sbjct: 117 FIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPT 173
Query: 667 GSVSQLSGHLLTAYGYGAPE--FESGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQ 724
G S ++ + T + Y APE S Y+ DV+S G ++ EL R + R+ Q
Sbjct: 174 GQQSGMTEXVATRW-YRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFP-GRDYRHQ 231
Query: 725 FLVRWAI 731
L+ + I
Sbjct: 232 LLLIFGI 238
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 87/207 (42%), Gaps = 21/207 (10%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL--- 572
+G+G GSV A G +AVKKL + S + + ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 573 --KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
E + + + L +++ +++ + + R L+Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH-- 142
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESG 690
I+HR+ K +N+ + + GLA + +++G++ T + Y APE
Sbjct: 143 -SADIIHRDLKPSNLAVNEDCELKILGFGLA----RHTDDEMTGYVATRW-YRAPEIMLN 196
Query: 691 I--YTCQSDVYSFGVVMLELLTGRKSY 715
Y D++S G +M ELLTGR +
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 124/312 (39%), Gaps = 60/312 (19%)
Query: 505 QQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRI 564
Q N E ++G G G+V G+ +AV KR D +E+ +
Sbjct: 11 QSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAV----KRMLIDFCDIALMEIKLLTESD 66
Query: 565 RHANIVELKGYCAEHGQRLLI--YEYCSNGTLQDMLH----SDDELKNNLSWNTRIRMAL 618
H N++ + YC+E R L E C N LQD++ SD+ LK +N I +
Sbjct: 67 DHPNVI--RYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNP-ISLLR 122
Query: 619 GAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVS-------------VSDCGLAPLIS 665
A + +LH + I+HR+ K NI + +SD GL +
Sbjct: 123 QIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD 179
Query: 666 SG------SVSQLSGHLLTAYGYGAPEFESGIYTCQS--------DVYSFGVVMLELLTG 711
SG +++ SG G+ APE Q+ D++S G V +L+
Sbjct: 180 SGQXXFRXNLNNPSG----TSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSK 235
Query: 712 RKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSLSGQYPAKSLSHFADIISRCVQSE 771
K + E ++R + +D + + D SL ++ D+IS+ + +
Sbjct: 236 GKHPFGDKYSRESNIIR----GIFSLDEMKCLHDRSL--------IAEATDLISQMIDHD 283
Query: 772 PEFRPPMSEVVQ 783
P RP +V++
Sbjct: 284 PLKRPTAMKVLR 295
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 86/212 (40%), Gaps = 17/212 (8%)
Query: 511 FSQENLIGAGMLGSVYRAQLPD-GKLLAVKKLDKRASSQQKDDEFLELVNNI--DRIRHA 567
F +IG G V +L ++ A+K + K + +D ++++ ++ H
Sbjct: 11 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 70
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
+V L + + EY + G L + +L + ++L AL YL
Sbjct: 71 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISL----ALNYL 126
Query: 628 HEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAP--LISSGSVSQLSGHLLTAYGYGAP 685
HE I++R+ K N+ + ++D G+ L + S G Y AP
Sbjct: 127 HERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCG----TPNYIAP 179
Query: 686 EFESG-IYTCQSDVYSFGVVMLELLTGRKSYD 716
E G Y D ++ GV+M E++ GR +D
Sbjct: 180 EILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 103/240 (42%), Gaps = 28/240 (11%)
Query: 517 IGAGMLGSVYRAQLPD-GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
+G G G V+ A D K +A+KK+ + Q L + I R+ H NIV++
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKI--VLTDPQSVKHALREIKIIRRLDHDNIVKVFEI 76
Query: 576 CAEHGQRLL-----IYEYCSNGTLQDMLHSDDELKNNLSW------NTRIRMALGAARAL 624
G +L + E S +Q+ + +D L N L + R+ M R L
Sbjct: 77 LGPSGSQLTDDVGSLTELNSVYIVQEYMETD--LANVLEQGPLLEEHARLFMY-QLLRGL 133
Query: 625 EYLHEICQPPIVHRNFKSANIXXXXXXAV-SVSDCGLAPLISSGSVSQLSGHL---LTAY 680
+Y+H ++HR+ K AN+ V + D GLA ++ + GHL L
Sbjct: 134 KYIH---SANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHK--GHLSEGLVTK 188
Query: 681 GYGAPEF--ESGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDID 738
Y +P YT D+++ G + E+LTG+ + + L+ +IP +H+ D
Sbjct: 189 WYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEED 248
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 94/219 (42%), Gaps = 34/219 (15%)
Query: 508 TNSFSQENLIGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRI-R 565
T+ + +G G V R ++P G+ A K ++ + S +D + LE I R+ +
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSA-RDHQKLEREARICRLLK 61
Query: 566 HANIVELKGYCAEHGQRLLIYEYCSNGTL-QDMLHSDDELKNNLSWNTRIRMALGAARAL 624
H NIV L +E G L+++ + G L +D++ + + + + + L
Sbjct: 62 HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE--------YYSEADASHCIQQIL 113
Query: 625 EYLHEICQPPIVHRNFKSANIXXXXX---XAVSVSDCGLAPLIS---------SGSVSQL 672
E ++ IVHR+ K N+ AV ++D GLA + +G+ L
Sbjct: 114 ESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYL 173
Query: 673 SGHLLTAYGYGAPEFESGIYTCQSDVYSFGVVMLELLTG 711
S +L YG P D+++ GV++ LL G
Sbjct: 174 SPEVLRKDPYGKP----------VDMWACGVILYILLVG 202
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 97/214 (45%), Gaps = 19/214 (8%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
+G+G GSV A G+ +A+KKL + S+ + + ++H N++ L
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 576 CAEHGQRLLIYE-YCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPP 634
Y+ Y +Q L LK S + + L+Y+H
Sbjct: 92 FTPASSLRNFYDFYLVMPFMQTDLQKIMGLK--FSEEKIQYLVYQMLKGLKYIHSAG--- 146
Query: 635 IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FESGIYT 693
+VHR+ K N+ + + D GLA + ++++G+++T + Y APE S ++
Sbjct: 147 VVHRDLKPGNLAVNEDCELKILDFGLA----RHADAEMTGYVVTRW-YRAPEVILSWMHY 201
Query: 694 CQS-DVYSFGVVMLELLTGRKSYDRTRNRGEQFL 726
Q+ D++S G +M E+LTG +T +G+ +L
Sbjct: 202 NQTVDIWSVGCIMAEMLTG-----KTLFKGKDYL 230
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 94/221 (42%), Gaps = 27/221 (12%)
Query: 500 TIASLQQYTNSFSQENLIGAGMLGSV---YRAQLPDGKLLAVKKLDKRASSQQKDDEFLE 556
T L++Y N IG+G G V Y A L +A+KKL + +Q
Sbjct: 19 TFTVLKRYQNL----KPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR 72
Query: 557 LVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRI-- 614
+ + + H NI+ L S QD+ + + NLS ++
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQK---------SLEEFQDVYIVMELMDANLSQVIQMEL 123
Query: 615 ---RMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQ 671
RM+ + L + + I+HR+ K +NI + + D GLA ++G+
Sbjct: 124 DHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFM 181
Query: 672 LSGHLLTAYGYGAPEFESGI-YTCQSDVYSFGVVMLELLTG 711
++ +++T Y Y APE G+ Y D++S G +M E++ G
Sbjct: 182 MTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 95/212 (44%), Gaps = 27/212 (12%)
Query: 517 IGAGMLGSVYRA---QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELK 573
+G G G VY+A D K A+K+++ S E + + ++H N++ L+
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACRE----IALLRELKHPNVISLQ 84
Query: 574 GYCAEHGQR--LLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEY----- 626
H R L+++Y + D+ H + + + +++ G ++L Y
Sbjct: 85 KVFLSHADRKVWLLFDYAEH----DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDG 140
Query: 627 LHEICQPPIVHRNFKSANIXXX----XXXAVSVSDCGLAPLISS--GSVSQLSGHLLTAY 680
+H + ++HR+ K ANI V ++D G A L +S ++ L ++T +
Sbjct: 141 IHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVT-F 199
Query: 681 GYGAPEFESGI--YTCQSDVYSFGVVMLELLT 710
Y APE G YT D+++ G + ELLT
Sbjct: 200 WYRAPELLLGARHYTKAIDIWAIGCIFAELLT 231
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 517 IGAGMLGSVYRAQLPDG-KLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
IG G G+V++A+ + +++A+K++ + L + + ++H NIV L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 576 CAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPI 635
+ L++E+C QD+ D +L + L + H +
Sbjct: 70 LHSDKKLTLVFEFCD----QDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH---SRNV 122
Query: 636 VHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE--FESGIYT 693
+HR+ K N+ + +++ GLA V S ++T + Y P+ F + +Y+
Sbjct: 123 LHRDLKPQNLLINRNGELKLANFGLARAFGI-PVRCYSAEVVTLW-YRPPDVLFGAKLYS 180
Query: 694 CQSDVYSFGVVMLEL 708
D++S G + EL
Sbjct: 181 TSIDMWSAGCIFAEL 195
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 86/212 (40%), Gaps = 17/212 (8%)
Query: 511 FSQENLIGAGMLGSVYRAQLPD-GKLLAVKKLDKRASSQQKDDEFLELVNNI--DRIRHA 567
F +IG G V +L ++ A+K + K + +D ++++ ++ H
Sbjct: 7 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 66
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
+V L + + EY + G L + +L + ++L AL YL
Sbjct: 67 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISL----ALNYL 122
Query: 628 HEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAP--LISSGSVSQLSGHLLTAYGYGAP 685
HE I++R+ K N+ + ++D G+ L + S G Y AP
Sbjct: 123 HE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCG----TPNYIAP 175
Query: 686 EFESG-IYTCQSDVYSFGVVMLELLTGRKSYD 716
E G Y D ++ GV+M E++ GR +D
Sbjct: 176 EILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 86/212 (40%), Gaps = 17/212 (8%)
Query: 511 FSQENLIGAGMLGSVYRAQLPD-GKLLAVKKLDKRASSQQKDDEFLELVNNI--DRIRHA 567
F +IG G V +L ++ A+K + K + +D ++++ ++ H
Sbjct: 22 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 81
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
+V L + + EY + G L + +L + ++L AL YL
Sbjct: 82 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISL----ALNYL 137
Query: 628 HEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAP--LISSGSVSQLSGHLLTAYGYGAP 685
HE I++R+ K N+ + ++D G+ L + S G Y AP
Sbjct: 138 HE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCG----TPNYIAP 190
Query: 686 EFESG-IYTCQSDVYSFGVVMLELLTGRKSYD 716
E G Y D ++ GV+M E++ GR +D
Sbjct: 191 EILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 222
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 94/219 (42%), Gaps = 34/219 (15%)
Query: 508 TNSFSQENLIGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRI-R 565
T+ + +G G V R ++P G+ A K ++ + S +D + LE I R+ +
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSA-RDHQKLEREARICRLLK 61
Query: 566 HANIVELKGYCAEHGQRLLIYEYCSNGTL-QDMLHSDDELKNNLSWNTRIRMALGAARAL 624
H NIV L +E G L+++ + G L +D++ + + + + + L
Sbjct: 62 HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE--------YYSEADASHCIQQIL 113
Query: 625 EYLHEICQPPIVHRNFKSANIXXXXX---XAVSVSDCGLAPLIS---------SGSVSQL 672
E ++ IVHR+ K N+ AV ++D GLA + +G+ L
Sbjct: 114 ESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYL 173
Query: 673 SGHLLTAYGYGAPEFESGIYTCQSDVYSFGVVMLELLTG 711
S +L YG P D+++ GV++ LL G
Sbjct: 174 SPEVLRKDPYGKP----------VDMWACGVILYILLVG 202
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 94/223 (42%), Gaps = 31/223 (13%)
Query: 500 TIASLQQYTNSFSQENLIGAGMLGSV---YRAQLPDGKLLAVKKLDKRASSQQKDDEFLE 556
T L++Y N IG+G G V Y A L +A+KKL + +Q
Sbjct: 19 TFTVLKRYQNL----KPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR 72
Query: 557 LVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRM 616
+ + + H NI+ L S QD+ + + NLS I+M
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQK---------SLEEFQDVYIVMELMDANLS--QVIQM 121
Query: 617 ALGAARALEYLHEIC-------QPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSV 669
L R L+++ I+HR+ K +NI + + D GLA ++G+
Sbjct: 122 ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTS 179
Query: 670 SQLSGHLLTAYGYGAPEFESGI-YTCQSDVYSFGVVMLELLTG 711
++ +++T Y Y APE G+ Y D++S G +M E++ G
Sbjct: 180 FMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 89/205 (43%), Gaps = 22/205 (10%)
Query: 517 IGAGMLGSVYRAQ--LPDGKLLAVKKLDKRASSQQKDDEFLE---LVNNIDRIRHANIVE 571
IG G G V++A+ G+ +A+K++ + + + ++ +++ H N+V
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 572 LKGYCA-----EHGQRLLIYEYCSNGTLQDMLHSDDEL-KNNLSWNTRIRMALGAARALE 625
L C + L++E+ QD+ D++ + + T M R L+
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVD----QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLD 134
Query: 626 YLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAP 685
+LH +VHR+ K NI + ++D GLA + S L+ ++T + Y AP
Sbjct: 135 FLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--LTSVVVTLW-YRAP 188
Query: 686 E-FESGIYTCQSDVYSFGVVMLELL 709
E Y D++S G + E+
Sbjct: 189 EVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 66/168 (39%), Gaps = 31/168 (18%)
Query: 35 VTNPNDVAAINSLYAALGSPV-LPGWVASAGDPCGESWQGVQCNASDIIAIIXXXXXXXX 93
+ NP D A+ + LG+P L W+ + D C +W GV C+
Sbjct: 2 LCNPQDKQALLQIKKDLGNPTTLSSWLPTT-DCCNRTWLGVLCDTDT------------- 47
Query: 94 XXXXXXXXFSSIRVIDLSNNHIGGSIPSILPVTMQNF----FL---SDNQFSGSIPSSLA 146
+ RV +L + + P +P ++ N FL N G IP ++A
Sbjct: 48 ---------QTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIA 98
Query: 147 TLTLLTDMSLNNNLLSGEIPDAFQSLTGLIXXXXXXXXXXGELPPSLE 194
LT L + + + +SG IPD + L+ G LPPS+
Sbjct: 99 KLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSIS 146
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Query: 104 SIRVIDLSNNHIGGSIP---SILPVTMQNFFLSDNQFSGSIPSSLATLT-LLTDMSLNNN 159
++ +D S N + G++P S LP + N+ SG+IP S + + L T M+++ N
Sbjct: 126 TLVTLDFSYNALSGTLPPSISSLP-NLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRN 184
Query: 160 LLSGEIPDAFQSL 172
L+G+IP F +L
Sbjct: 185 RLTGKIPPTFANL 197
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 89/205 (43%), Gaps = 22/205 (10%)
Query: 517 IGAGMLGSVYRAQ--LPDGKLLAVKKLDKRASSQQKDDEFLE---LVNNIDRIRHANIVE 571
IG G G V++A+ G+ +A+K++ + + + ++ +++ H N+V
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 572 LKGYCA-----EHGQRLLIYEYCSNGTLQDMLHSDDEL-KNNLSWNTRIRMALGAARALE 625
L C + L++E+ QD+ D++ + + T M R L+
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVD----QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLD 134
Query: 626 YLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAP 685
+LH +VHR+ K NI + ++D GLA + S L+ ++T + Y AP
Sbjct: 135 FLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--LTSVVVTLW-YRAP 188
Query: 686 E-FESGIYTCQSDVYSFGVVMLELL 709
E Y D++S G + E+
Sbjct: 189 EVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 102/215 (47%), Gaps = 21/215 (9%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGY 575
+G+G GSV A G+ +A+KKL + S+ + + ++H N++ L
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 576 CAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNT-RIR-MALGAARALEYLHEICQP 633
Y++ + + +D + + ++ +I+ + + L+Y+H
Sbjct: 110 FTPASSLRNFYDFY---LVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAG-- 164
Query: 634 PIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FESGIY 692
+VHR+ K N+ + + D GLA + ++++G+++T + Y APE S ++
Sbjct: 165 -VVHRDLKPGNLAVNEDCELKILDFGLA----RHADAEMTGYVVTRW-YRAPEVILSWMH 218
Query: 693 TCQS-DVYSFGVVMLELLTGRKSYDRTRNRGEQFL 726
Q+ D++S G +M E+LTG +T +G+ +L
Sbjct: 219 YNQTVDIWSVGCIMAEMLTG-----KTLFKGKDYL 248
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 635 IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESGI-YT 693
I+HR+ K +NI + + D GLA ++G+ ++ +++T Y Y APE G+ Y
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRY-YRAPEVILGMGYK 203
Query: 694 CQSDVYSFGVVMLELLTG 711
D++S G +M E++ G
Sbjct: 204 ENVDIWSVGCIMGEMIKG 221
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 89/205 (43%), Gaps = 22/205 (10%)
Query: 517 IGAGMLGSVYRAQ--LPDGKLLAVKKLDKRASSQQKDDEFLE---LVNNIDRIRHANIVE 571
IG G G V++A+ G+ +A+K++ + + + ++ +++ H N+V
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 572 LKGYCA-----EHGQRLLIYEYCSNGTLQDMLHSDDEL-KNNLSWNTRIRMALGAARALE 625
L C + L++E+ QD+ D++ + + T M R L+
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVD----QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLD 134
Query: 626 YLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAP 685
+LH +VHR+ K NI + ++D GLA + S L+ ++T + Y AP
Sbjct: 135 FLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--LTSVVVTLW-YRAP 188
Query: 686 E-FESGIYTCQSDVYSFGVVMLELL 709
E Y D++S G + E+
Sbjct: 189 EVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 119/310 (38%), Gaps = 61/310 (19%)
Query: 493 FTTARSFTIASLQQYTNSFSQEN-----LIGAGMLGSVYRAQL----PDGKLLAVKKLDK 543
T A+L + EN ++G G G V+ + GKL A+K L K
Sbjct: 33 LTVKHELRTANLTGHAEKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKK 92
Query: 544 RASSQQ-KDDEFLELVNNI-DRIRHANIVELKGYCAEHGQRL-LIYEYCSNGTLQDMLHS 600
Q+ K E + + IR + + Y + +L LI +Y + G L L
Sbjct: 93 ATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQ 152
Query: 601 DDELKNNLSWNTRIRMALGA-ARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCG 659
+ + +++ +G ALE+LH++ I++R+ K NI V ++D G
Sbjct: 153 RERFTEH-----EVQIYVGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFG 204
Query: 660 LAPLISSGSVSQLSGHLLTAYGYGAPEFESGI---YTCQSDVYSFGVVMLELLTGRKSYD 716
L+ + ++ + Y AP+ G + D +S GV+M ELLTG +
Sbjct: 205 LSKEFVADE-TERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPF- 262
Query: 717 RTRNRGEQFLVRWAIPQLHDIDALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRP 776
VD + Q A+I R ++SEP +
Sbjct: 263 --------------------------TVDGEKNSQ---------AEISRRILKSEPPYPQ 287
Query: 777 PMSEVVQDLV 786
MS + +DL+
Sbjct: 288 EMSALAKDLI 297
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 63/149 (42%), Gaps = 16/149 (10%)
Query: 592 GTLQDMLHSDDELKN--NLSWNTRIRMALGAARALEYLHEI-------CQPPIVHRNFKS 642
G + L+ D L N +L+ R + L RA+ + +I HR+ K
Sbjct: 103 GEIDGQLYVDXRLINGVDLAAXLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKP 162
Query: 643 ANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE-FESGIYTCQSDVYSF 701
NI + D G+A + ++QL + T Y Y APE F T ++D+Y+
Sbjct: 163 ENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLY-YXAPERFSESHATYRADIYAL 221
Query: 702 GVVMLELLTGRKSYDRTRNRGEQFLVRWA 730
V+ E LTG Y +G+Q V A
Sbjct: 222 TCVLYECLTGSPPY-----QGDQLSVXGA 245
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 95/217 (43%), Gaps = 20/217 (9%)
Query: 514 ENL--IGAGMLGSVYRAQL-PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIV 570
ENL +G+G G V++ + G ++AVK++ + + ++ ++L + IV
Sbjct: 28 ENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIV 87
Query: 571 ELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI 630
+ G + + E GT + L ++ + +M + +AL YL E
Sbjct: 88 QCFGTFITNTDVFIAMELM--GTCAEKLKK--RMQGPIPERILGKMTVAIVKALYYLKE- 142
Query: 631 CQPPIVHRNFKSANIXXXXXXAVSVSDCGLAP-LISSGSVSQLSGHLLTAYGYGAPEF-- 687
+ ++HR+ K +NI + + D G++ L+ + + +G Y APE
Sbjct: 143 -KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAG----CAAYMAPERID 197
Query: 688 ----ESGIYTCQSDVYSFGVVMLELLTGRKSYDRTRN 720
Y ++DV+S G+ ++EL TG+ Y +
Sbjct: 198 PPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKT 234
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 94/238 (39%), Gaps = 39/238 (16%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDG-KLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+++ ++LIG G G VY A + K +A+KK+++ L + ++R++
Sbjct: 28 DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 87
Query: 568 NIVELKGYCAEHG----QRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
I+ L L I ++ L+ + + L + LG
Sbjct: 88 YIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGE--- 144
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGS--------------- 668
+++HE I+HR+ K AN +V + D GLA I+S
Sbjct: 145 -KFIHE---SGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENE 200
Query: 669 ---------VSQLSGHLLTAYGYGAPE--FESGIYTCQSDVYSFGVVMLELLTGRKSY 715
QL+ H++T + Y APE YT D++S G + ELL KS+
Sbjct: 201 EPGPHNKNLKKQLTSHVVTRW-YRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSH 257
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 133/312 (42%), Gaps = 55/312 (17%)
Query: 508 TNSFS---------QENLIGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLEL 557
T+SFS QE+++G G V L + AVK ++K+ + F E+
Sbjct: 3 TDSFSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPG-HIRSRVFREV 61
Query: 558 VNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMA 617
H N++EL + E + L++E G++ +H N L + ++
Sbjct: 62 EMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHF-NELEASVVVQ-- 118
Query: 618 LGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVS---VSDCGLAPLIS-SGSVSQLS 673
A AL++LH I HR+ K NI VS + D L I +G S +S
Sbjct: 119 -DVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPIS 174
Query: 674 G-HLLTAYG---YGAPEF------ESGIYTCQSDVYSFGVVMLELLT------GRKSYDR 717
LLT G Y APE E+ IY + D++S GV++ LL+ GR D
Sbjct: 175 TPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDC 234
Query: 718 TRNRGEQFLVRWAIPQLHDIDALSRMVDPSLSGQY--PAKSLSHFA----DIISRCVQSE 771
+RGE A P ++ + + G+Y P K +H + D+IS+ + +
Sbjct: 235 GWDRGE------ACPACQNM-----LFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRD 283
Query: 772 PEFRPPMSEVVQ 783
+ R ++V+Q
Sbjct: 284 AKQRLSAAQVLQ 295
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 89/211 (42%), Gaps = 16/211 (7%)
Query: 517 IGAGMLGSVYRA--QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKG 574
+G G GSV + ++ ++ K+ K+ + + +E + + ++ + IV L G
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 575 YCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPP 634
C +L+ E G L L E + + + + ++YL E
Sbjct: 404 VCQAEAL-MLVMEMAGGGPLHKFLVGKRE---EIPVSNVAELLHQVSMGMKYLEE---KN 456
Query: 635 IVHRNFKSANIXXXXXXAVSVSDCGLAPLIS---SGSVSQLSGHL-LTAYGYGAPEFESG 690
VHRN + N+ +SD GL+ + S ++ +G L Y F
Sbjct: 457 FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRK- 515
Query: 691 IYTCQSDVYSFGVVMLELLT-GRKSYDRTRN 720
++ +SDV+S+GV M E L+ G+K Y + +
Sbjct: 516 -FSSRSDVWSYGVTMWEALSYGQKPYKKMKG 545
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 98/245 (40%), Gaps = 21/245 (8%)
Query: 478 AEGTAVKTSTKTAKPFTTARSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQLPD-GKLL 536
A G+ ++ + + ++ + LQ F +IG G V +L ++
Sbjct: 25 AMGSGIEEEKEAMNTRESGKASSSLGLQ----DFDLLRVIGRGSYAKVLLVRLKKTDRIY 80
Query: 537 AVKKLDKRASSQQKDDEFLELVNNI--DRIRHANIVELKGYCAEHGQRLLIYEYCSNGTL 594
A++ + K + +D ++++ ++ H +V L + + EY + G L
Sbjct: 81 AMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL 140
Query: 595 QDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVS 654
+ +L + ++L AL YLHE I++R+ K N+ +
Sbjct: 141 MFHMQRQRKLPEEHARFYSAEISL----ALNYLHE---RGIIYRDLKLDNVLLDSEGHIK 193
Query: 655 VSDCGLAP--LISSGSVSQLSGHLLTAYGYGAPEFESG-IYTCQSDVYSFGVVMLELLTG 711
++D G+ L + S G Y APE G Y D ++ GV+M E++ G
Sbjct: 194 LTDYGMCKEGLRPGDTTSTFCG----TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAG 249
Query: 712 RKSYD 716
R +D
Sbjct: 250 RSPFD 254
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 635 IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESGI-YT 693
I+HR+ K +NI + + D GLA ++G+ ++ +++T Y Y APE G+ Y
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRY-YRAPEVILGMGYK 203
Query: 694 CQSDVYSFGVVMLELLTG 711
D++S G +M E++ G
Sbjct: 204 ENVDIWSVGCIMGEMIKG 221
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 94/221 (42%), Gaps = 34/221 (15%)
Query: 506 QYTNSFSQENLIGAGMLGSVYR-AQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRI 564
++T + +G G V R ++ G+ A ++ + S +D + LE I R+
Sbjct: 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSA-RDHQKLEREARICRL 66
Query: 565 -RHANIVELKGYCAEHGQRLLIYEYCSNGTL-QDMLHSDDELKNNLSWNTRIRMALGAAR 622
+H NIV L +E G LI++ + G L +D++ + + + S + +
Sbjct: 67 LKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQ--------Q 118
Query: 623 ALEYLHEICQPPIVHRNFKSANIXXXXX---XAVSVSDCGLAPLIS---------SGSVS 670
LE + Q +VHRN K N+ AV ++D GLA + +G+
Sbjct: 119 ILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPG 178
Query: 671 QLSGHLLTAYGYGAPEFESGIYTCQSDVYSFGVVMLELLTG 711
LS +L YG P D+++ GV++ LL G
Sbjct: 179 YLSPEVLRKDPYGKP----------VDLWACGVILYILLVG 209
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 635 IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESGI-YT 693
I+HR+ K +NI + + D GLA ++G+ ++ +++T Y Y APE G+ Y
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRY-YRAPEVILGMGYK 203
Query: 694 CQSDVYSFGVVMLELLTG 711
D++S G +M E++ G
Sbjct: 204 ENVDIWSVGCIMGEMIKG 221
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 635 IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESGI-YT 693
I+HR+ K +NI + + D GLA ++G+ ++ +++T Y Y APE G+ Y
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRY-YRAPEVILGMGYK 203
Query: 694 CQSDVYSFGVVMLELLTG 711
D++S G +M E++ G
Sbjct: 204 ENVDIWSVGCIMGEMIKG 221
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 10/93 (10%)
Query: 622 RALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYG 681
+ L Y+H I+HR+ K N+ + + D GLA + S++ G ++T +
Sbjct: 139 KGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLA----RQADSEMXGXVVTRW- 190
Query: 682 YGAPE--FESGIYTCQSDVYSFGVVMLELLTGR 712
Y APE YT D++S G +M E++TG+
Sbjct: 191 YRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 635 IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESGI-YT 693
I+HR+ K +NI + + D GLA ++G+ ++ +++T Y Y APE G+ Y
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRY-YRAPEVILGMGYK 204
Query: 694 CQSDVYSFGVVMLELLTG 711
D++S G +M E++ G
Sbjct: 205 ENVDIWSVGCIMGEMIKG 222
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 88/213 (41%), Gaps = 15/213 (7%)
Query: 504 LQQYTNSFSQENLIGAGMLGSVYRAQLP-DGKLLAVKKLDKRA-SSQQKDDEFLELVNNI 561
Q ++ + + +G+G G V + G A+K + K + ++ L+ V +
Sbjct: 16 FQGLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVL 75
Query: 562 DRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAA 621
++ H NI++L + + L+ E G L D + L+ S +
Sbjct: 76 KQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEII----LRQKFSEVDAAVIMKQVL 131
Query: 622 RALEYLHEICQPPIVHRNFKSANIXXXXX---XAVSVSDCGLAPLISSGSVSQLSGHLLT 678
YLH + IVHR+ K N+ + + D GL+ G ++ L T
Sbjct: 132 SGTTYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGG--KMKERLGT 186
Query: 679 AYGYGAPEFESGIYTCQSDVYSFGVVMLELLTG 711
AY Y APE Y + DV+S GV++ LL G
Sbjct: 187 AY-YIAPEVLRKKYDEKCDVWSCGVILYILLCG 218
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 25/206 (12%)
Query: 517 IGAGMLGSVYRAQLPDGKL---LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL- 572
+G+G GSV A D +L +AVKKL + S + + ++H N++ L
Sbjct: 36 VGSGAYGSVCSAY--DARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 573 ----KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLH 628
E + + L +++ S ++ + + R L+Y+H
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQF-----LVYQLLRGLKYIH 148
Query: 629 EICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFE 688
I+HR+ K +N+ + + D GLA + +++G++ T + Y APE
Sbjct: 149 SAG---IIHRDLKPSNVAVNEDSELRILDFGLA----RQADEEMTGYVATRW-YRAPEIM 200
Query: 689 SGI--YTCQSDVYSFGVVMLELLTGR 712
Y D++S G +M ELL G+
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 21/209 (10%)
Query: 511 FSQENLIGAGMLGSVYRA-QLPDGKLLAVKKLDK------RASSQQKDDEFLELVNNIDR 563
+ Q IG+G G V A G +AVKKL + A ++ L+ VN+ +
Sbjct: 26 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNI 85
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
I N+ + E L+ E + L ++H EL + +M G
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIHM--ELDHERMSYLLYQMLCG---- 138
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYG 683
+++LH I+HR+ K +NI + + D GLA ++ + ++ +++T Y Y
Sbjct: 139 IKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TACTNFMMTPYVVTRY-YR 192
Query: 684 APEFESGI-YTCQSDVYSFGVVMLELLTG 711
APE G+ Y D++S G +M EL+ G
Sbjct: 193 APEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 21/209 (10%)
Query: 511 FSQENLIGAGMLGSVYRA-QLPDGKLLAVKKLDK------RASSQQKDDEFLELVNNIDR 563
+ Q IG+G G V A G +AVKKL + A ++ L+ VN+ +
Sbjct: 24 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNI 83
Query: 564 IRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
I N+ + E L+ E + L ++H EL + +M G
Sbjct: 84 ISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIHM--ELDHERMSYLLYQMLCG---- 136
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYG 683
+++LH I+HR+ K +NI + + D GLA S+ + ++ +++T Y Y
Sbjct: 137 IKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFM--MTPYVVTRY-YR 190
Query: 684 APEFESGI-YTCQSDVYSFGVVMLELLTG 711
APE G+ Y D++S G +M EL+ G
Sbjct: 191 APEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/283 (20%), Positives = 113/283 (39%), Gaps = 44/283 (15%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIR-HAN-IVELKG 574
IG+G V++ ++ A+K ++ + Q D + + +++++ H++ I+ L
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 575 YCAEHGQRLLIYEYCSNGTLQDMLH---SDDELKNNLSWNTRIRMALGAARALEYLHEIC 631
Y ++ E C N L L S D + W LE +H I
Sbjct: 124 YEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKN----------MLEAVHTIH 172
Query: 632 QPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESGI 691
Q IVH + K AN + + D G+A + + S + + A Y PE +
Sbjct: 173 QHGIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDM 231
Query: 692 YTCQS------------DVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDA 739
+ + DV+S G ++ + G+ + + N+ I +LH I
Sbjct: 232 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ---------ISKLHAI-- 280
Query: 740 LSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVV 782
+DP+ ++P D++ C++ +P+ R + E++
Sbjct: 281 ----IDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 319
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 101/241 (41%), Gaps = 33/241 (13%)
Query: 500 TIASLQQYTNSFSQENLIGAGMLGSV---YRAQLPDGKLLAVKKLDKRASSQQKDDEFLE 556
T L++Y N IG+G G V Y A L + +A+KKL + +Q
Sbjct: 19 TFTVLKRYQNL----KPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR 72
Query: 557 LVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRI-- 614
+ + + H NI+ L Q+ L QD+ + + NL ++
Sbjct: 73 ELVLMKXVNHKNIISLLNVFT--PQKTL-------EEFQDVYLVMELMDANLXQVIQMEL 123
Query: 615 ---RMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQ 671
RM+ + L + + I+HR+ K +NI + + D GLA ++G+
Sbjct: 124 DHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFM 181
Query: 672 LSGHLLTAYGYGAPEFESGI-YTCQSDVYSFGVVMLE------LLTGRKSYDRTRNRGEQ 724
++ +++T Y Y APE G+ Y D++S G +M E L GR D+ EQ
Sbjct: 182 MTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 240
Query: 725 F 725
Sbjct: 241 L 241
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 108/280 (38%), Gaps = 39/280 (13%)
Query: 506 QYTNSFSQENLIGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRI 564
Q+T+ + + IG G R + AVK +DK ++ E L +
Sbjct: 19 QFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEIL-----LRYG 73
Query: 565 RHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARAL 624
+H NI+ LK + ++ E G L D + + S + + +
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILR----QKFFSEREASAVLFTITKTV 129
Query: 625 EYLHEICQPPIVHRNFKSANIXXXXXX----AVSVSDCGLAPLISSGSVSQLSGHLLT-- 678
EYLH +VHR+ K +NI ++ + D G A + + + G L+T
Sbjct: 130 EYLHA---QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN-----GLLMTPC 181
Query: 679 -AYGYGAPE-FESGIYTCQSDVYSFGVVMLELLTGRKSY-DRTRNRGEQFLVRWAIPQLH 735
+ APE E Y D++S GV++ +LTG + + + E+ L R +
Sbjct: 182 YTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKF- 240
Query: 736 DIDALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFR 775
SLSG Y D++S+ + +P R
Sbjct: 241 -----------SLSGGYWNSVSDTAKDLVSKMLHVDPHQR 269
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 92/219 (42%), Gaps = 17/219 (7%)
Query: 499 FTIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELV 558
F + + ++++++ + +G G V R L K+ +D + LE
Sbjct: 19 FMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLERE 78
Query: 559 NNIDR-IRHANIVELKGYCAEHGQRLLIYEYCSNGTL-QDMLHSDDELKNNLSWNTRIRM 616
I R ++H NIV L E L+++ + G L +D++ E + + I+
Sbjct: 79 ARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQ 136
Query: 617 ALGAARALEYLHEICQPPIVHRNFKSANI---XXXXXXAVSVSDCGLAPLISSGSVSQLS 673
L ++ Y H IVHRN K N+ AV ++D GLA I
Sbjct: 137 IL---ESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWH 188
Query: 674 GHLLTAYGYGAPE-FESGIYTCQSDVYSFGVVMLELLTG 711
G T GY +PE + Y+ D+++ GV++ LL G
Sbjct: 189 GFAGTP-GYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 635 IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESGI-YT 693
I+HR+ K +NI + + D GLA ++G+ ++ ++T Y Y APE G+ Y
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPEVVTRY-YRAPEVILGMGYK 203
Query: 694 CQSDVYSFGVVMLELLTG 711
D++S G +M E++ G
Sbjct: 204 ENVDIWSVGCIMGEMIKG 221
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 10/93 (10%)
Query: 622 RALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYG 681
R L+Y+H I+HR+ K +N+ + + D GLA + +++G++ T +
Sbjct: 142 RGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLA----RQADEEMTGYVATRW- 193
Query: 682 YGAPEFESGI--YTCQSDVYSFGVVMLELLTGR 712
Y APE Y D++S G +M ELL G+
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 87/209 (41%), Gaps = 15/209 (7%)
Query: 508 TNSFSQENLIGAGMLGSVYRAQLP-DGKLLAVKKLDKRA-SSQQKDDEFLELVNNIDRIR 565
++ + + +G+G G V + G A+K + K + ++ L+ V + ++
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 62
Query: 566 HANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALE 625
H NI++L + + L+ E G L D + L+ S +
Sbjct: 63 HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEII----LRQKFSEVDAAVIMKQVLSGTT 118
Query: 626 YLHEICQPPIVHRNFKSANIXXXXX---XAVSVSDCGLAPLISSGSVSQLSGHLLTAYGY 682
YLH + IVHR+ K N+ + + D GL+ G ++ L TAY Y
Sbjct: 119 YLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGG--KMKERLGTAY-Y 172
Query: 683 GAPEFESGIYTCQSDVYSFGVVMLELLTG 711
APE Y + DV+S GV++ LL G
Sbjct: 173 IAPEVLRKKYDEKCDVWSCGVILYILLCG 201
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 10/118 (8%)
Query: 615 RMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSG 674
RM+ + L + + I+HR+ K +NI + + D GLA ++G+ ++
Sbjct: 120 RMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTP 177
Query: 675 HLLTAYGYGAPEFESGI-YTCQSDVYSFGVVMLE------LLTGRKSYDRTRNRGEQF 725
+++T Y Y APE G+ Y D++S G +M E L GR D+ EQ
Sbjct: 178 YVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 234
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/283 (19%), Positives = 112/283 (39%), Gaps = 44/283 (15%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIR-HAN-IVELKG 574
IG+G V++ ++ A+K ++ + Q D + + +++++ H++ I+ L
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 575 YCAEHGQRLLIYEYCSNGTLQDMLH---SDDELKNNLSWNTRIRMALGAARALEYLHEIC 631
Y ++ E C N L L S D + W LE +H I
Sbjct: 124 YEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKN----------MLEAVHTIH 172
Query: 632 QPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESGI 691
Q IVH + K AN + + D G+A + + S + + Y PE +
Sbjct: 173 QHGIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 231
Query: 692 YTCQS------------DVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDA 739
+ + DV+S G ++ + G+ + + N+ I +LH I
Sbjct: 232 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ---------ISKLHAI-- 280
Query: 740 LSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVV 782
+DP+ ++P D++ C++ +P+ R + E++
Sbjct: 281 ----IDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 319
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 10/118 (8%)
Query: 615 RMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSG 674
RM+ + L + + I+HR+ K +NI + + D GLA ++G+ ++
Sbjct: 127 RMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTP 184
Query: 675 HLLTAYGYGAPEFESGI-YTCQSDVYSFGVVMLE------LLTGRKSYDRTRNRGEQF 725
+++T Y Y APE G+ Y D++S G +M E L GR D+ EQ
Sbjct: 185 YVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 241
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/283 (19%), Positives = 112/283 (39%), Gaps = 44/283 (15%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIR-HAN-IVELKG 574
IG+G V++ ++ A+K ++ + Q D + + +++++ H++ I+ L
Sbjct: 20 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 79
Query: 575 YCAEHGQRLLIYEYCSNGTLQDMLH---SDDELKNNLSWNTRIRMALGAARALEYLHEIC 631
Y ++ E C N L L S D + W LE +H I
Sbjct: 80 YEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKN----------MLEAVHTIH 128
Query: 632 QPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESGI 691
Q IVH + K AN + + D G+A + + S + + Y PE +
Sbjct: 129 QHGIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 187
Query: 692 YTCQS------------DVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDA 739
+ + DV+S G ++ + G+ + + N+ I +LH I
Sbjct: 188 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ---------ISKLHAI-- 236
Query: 740 LSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVV 782
+DP+ ++P D++ C++ +P+ R + E++
Sbjct: 237 ----IDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 275
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/283 (19%), Positives = 112/283 (39%), Gaps = 44/283 (15%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIR-HAN-IVELKG 574
IG+G V++ ++ A+K ++ + Q D + + +++++ H++ I+ L
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 95
Query: 575 YCAEHGQRLLIYEYCSNGTLQDMLH---SDDELKNNLSWNTRIRMALGAARALEYLHEIC 631
Y ++ E C N L L S D + W LE +H I
Sbjct: 96 YEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKN----------MLEAVHTIH 144
Query: 632 QPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESGI 691
Q IVH + K AN + + D G+A + + S + + Y PE +
Sbjct: 145 QHGIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 203
Query: 692 YTCQS------------DVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDA 739
+ + DV+S G ++ + G+ + + N+ I +LH I
Sbjct: 204 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ---------ISKLHAI-- 252
Query: 740 LSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVV 782
+DP+ ++P D++ C++ +P+ R + E++
Sbjct: 253 ----IDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 291
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 10/93 (10%)
Query: 622 RALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYG 681
R L+Y+H I+HR+ K +N+ + + D GLA + +++G++ T +
Sbjct: 134 RGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLA----RQADEEMTGYVATRW- 185
Query: 682 YGAPEFESGI--YTCQSDVYSFGVVMLELLTGR 712
Y APE Y D++S G +M ELL G+
Sbjct: 186 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 89/210 (42%), Gaps = 16/210 (7%)
Query: 517 IGAGMLGSVYRA--QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKG 574
+G G GSV + ++ ++ K+ K+ + + +E + + ++ + IV L G
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 575 YCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPP 634
C +L+ E G L L E + + + + ++YL E
Sbjct: 78 VCQAEAL-MLVMEMAGGGPLHKFLVGKRE---EIPVSNVAELLHQVSMGMKYLEE---KN 130
Query: 635 IVHRNFKSANIXXXXXXAVSVSDCGLAPLIS---SGSVSQLSGHL-LTAYGYGAPEFESG 690
VHR+ + N+ +SD GL+ + S ++ +G L Y F
Sbjct: 131 FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRK- 189
Query: 691 IYTCQSDVYSFGVVMLELLT-GRKSYDRTR 719
++ +SDV+S+GV M E L+ G+K Y + +
Sbjct: 190 -FSSRSDVWSYGVTMWEALSYGQKPYKKMK 218
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/283 (19%), Positives = 112/283 (39%), Gaps = 44/283 (15%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIR-HAN-IVELKG 574
IG+G V++ ++ A+K ++ + Q D + + +++++ H++ I+ L
Sbjct: 16 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 75
Query: 575 YCAEHGQRLLIYEYCSNGTLQDMLH---SDDELKNNLSWNTRIRMALGAARALEYLHEIC 631
Y ++ E C N L L S D + W LE +H I
Sbjct: 76 YEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKN----------MLEAVHTIH 124
Query: 632 QPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESGI 691
Q IVH + K AN + + D G+A + + S + + Y PE +
Sbjct: 125 QHGIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 183
Query: 692 YTCQS------------DVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDA 739
+ + DV+S G ++ + G+ + + N+ I +LH I
Sbjct: 184 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ---------ISKLHAI-- 232
Query: 740 LSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVV 782
+DP+ ++P D++ C++ +P+ R + E++
Sbjct: 233 ----IDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 271
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 84/222 (37%), Gaps = 29/222 (13%)
Query: 506 QYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDK---------------RASSQQK 550
+Y N + + G + + D K A+KK +K + S + K
Sbjct: 28 KYINDYRIIRTLNQGKFNKIILCE-KDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSK 86
Query: 551 DDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSW 610
D+F + I I++ + +G + + +IYEY N ++ L N +
Sbjct: 87 YDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTC 146
Query: 611 NTRIR----MALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISS 666
I+ + + Y+H + I HR+ K +NI V +SD G + +
Sbjct: 147 FIPIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVD 204
Query: 667 GSVSQLSGHLLTAYGYGAPEF---ESGIYTCQSDVYSFGVVM 705
+ G Y + PEF ES + D++S G+ +
Sbjct: 205 KKIKGSRG----TYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 101/243 (41%), Gaps = 37/243 (15%)
Query: 500 TIASLQQYTNSFSQENLIGAGMLGSV---YRAQLPDGKLLAVKKLDKRASSQQKDDEFLE 556
T L++Y N IG+G G V Y A L + +A+KKL + +Q
Sbjct: 19 TFTVLKRYQNL----KPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR 72
Query: 557 LVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRM 616
+ + + H NI+ L Q+ L QD+ + + NL I+M
Sbjct: 73 ELVLMKXVNHKNIISLLNVFTP--QKTL-------EEFQDVYLVMELMDANLX--QVIQM 121
Query: 617 ALGAARALEYLHEIC-------QPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSV 669
L R L+++ I+HR+ K +NI + + D GLA ++G+
Sbjct: 122 ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTS 179
Query: 670 SQLSGHLLTAYGYGAPEFESGI-YTCQSDVYSFGVVMLE------LLTGRKSYDRTRNRG 722
++ +++T Y Y APE G+ Y D++S G +M E L GR D+
Sbjct: 180 FMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI 238
Query: 723 EQF 725
EQ
Sbjct: 239 EQL 241
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 57/134 (42%), Gaps = 15/134 (11%)
Query: 587 EYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIX 646
+ C L+D ++ L++ + + + A A+E+LH ++HR+ K +NI
Sbjct: 141 QLCRKENLKDWMNRRCSLEDR-EHGVCLHIFIQIAEAVEFLH---SKGLMHRDLKPSNIF 196
Query: 647 XXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYG----------YGAPE-FESGIYTCQ 695
V V D GL + Q + AY Y +PE Y+ +
Sbjct: 197 FTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHK 256
Query: 696 SDVYSFGVVMLELL 709
D++S G+++ ELL
Sbjct: 257 VDIFSLGLILFELL 270
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 25/204 (12%)
Query: 517 IGAGMLGSVYR-AQLPDGKLLAVKKLDKRASSQQKDDEFL-ELVNNIDRIRHANIVELKG 574
+G G G V+R + G A K + + + D E + + + + +RH +V L
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFV---MTPHESDKETVRKEIQTMSVLRHPTLVNLHD 115
Query: 575 YCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPP 634
+ + ++IYE+ S G L + + + N +S + + + L ++HE
Sbjct: 116 AFEDDNEMVMIYEFMSGGELFEKVADE---HNKMSEDEAVEYMRQVCKGLCHMHENN--- 169
Query: 635 IVHRNFKSANIXXXXXXA--VSVSDCGL-APLISSGSVSQLSGHLLTAYGYGAPEFES-- 689
VH + K NI + + + D GL A L SV +G TA + APE
Sbjct: 170 YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTG---TA-EFAAPEVAEGK 225
Query: 690 --GIYTCQSDVYSFGVVMLELLTG 711
G YT D++S GV+ LL+G
Sbjct: 226 PVGYYT---DMWSVGVLSYILLSG 246
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 90/210 (42%), Gaps = 34/210 (16%)
Query: 517 IGAGMLGSVYR-AQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRI-RHANIVELKG 574
+G G V R ++ G+ A K ++ + S +D + LE I R+ +H NIV L
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSA-RDHQKLEREARICRLLKHPNIVRLHD 88
Query: 575 YCAEHGQRLLIYEYCSNGTL-QDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQP 633
+E G LI++ + G L +D++ + + + + + LE + Q
Sbjct: 89 SISEEGHHYLIFDLVTGGELFEDIVARE--------YYSEADASHCIQQILEAVLHCHQM 140
Query: 634 PIVHRNFKSANIXXXXX---XAVSVSDCGLAPLIS---------SGSVSQLSGHLLTAYG 681
+VHR+ K N+ AV ++D GLA + +G+ LS +L
Sbjct: 141 GVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDP 200
Query: 682 YGAPEFESGIYTCQSDVYSFGVVMLELLTG 711
YG P D+++ GV++ LL G
Sbjct: 201 YGKP----------VDLWACGVILYILLVG 220
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 10/98 (10%)
Query: 635 IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESGI-YT 693
I+HR+ K +NI + + D GLA ++G+ ++ +++T Y Y APE G+ Y
Sbjct: 140 IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRY-YRAPEVILGMGYK 196
Query: 694 CQSDVYSFGVVMLE------LLTGRKSYDRTRNRGEQF 725
D++S G +M E L GR D+ EQ
Sbjct: 197 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 234
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 10/98 (10%)
Query: 635 IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESGI-YT 693
I+HR+ K +NI + + D GLA ++G+ ++ +++T Y Y APE G+ Y
Sbjct: 141 IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRY-YRAPEVILGMGYK 197
Query: 694 CQSDVYSFGVVMLE------LLTGRKSYDRTRNRGEQF 725
D++S G +M E L GR D+ EQ
Sbjct: 198 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 235
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 10/98 (10%)
Query: 635 IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESGI-YT 693
I+HR+ K +NI + + D GLA ++G+ ++ +++T Y Y APE G+ Y
Sbjct: 141 IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRY-YRAPEVILGMGYK 197
Query: 694 CQSDVYSFGVVMLE------LLTGRKSYDRTRNRGEQF 725
D++S G +M E L GR D+ EQ
Sbjct: 198 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 235
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 10/98 (10%)
Query: 635 IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESGI-YT 693
I+HR+ K +NI + + D GLA ++G+ ++ +++T Y Y APE G+ Y
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRY-YRAPEVILGMGYK 203
Query: 694 CQSDVYSFGVVMLE------LLTGRKSYDRTRNRGEQF 725
D++S G +M E L GR D+ EQ
Sbjct: 204 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 241
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 10/98 (10%)
Query: 635 IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESGI-YT 693
I+HR+ K +NI + + D GLA ++G+ ++ +++T Y Y APE G+ Y
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRY-YRAPEVILGMGYK 203
Query: 694 CQSDVYSFGVVMLE------LLTGRKSYDRTRNRGEQF 725
D++S G +M E L GR D+ EQ
Sbjct: 204 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 241
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 102/271 (37%), Gaps = 43/271 (15%)
Query: 523 GSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYC----AE 578
G +++ + G + VK L R S +K +F E + H N++ + G C A
Sbjct: 24 GELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAP 82
Query: 579 HGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHR 638
H LI + G+L ++LH + S ++ AL AR +LH + P++ R
Sbjct: 83 HPT--LITHWXPYGSLYNVLHEGTNFVVDQS--QAVKFALDXARGXAFLHTL--EPLIPR 136
Query: 639 ---NFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEF----ESGI 691
N +S I +S +D + S G A + APE
Sbjct: 137 HALNSRSVXIDEDXTARISXADVKFS-FQSPGRX--------YAPAWVAPEALQKKPEDT 187
Query: 692 YTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSLSGQ 751
+D +SF V++ EL+T + N I ++ L + P +S
Sbjct: 188 NRRSADXWSFAVLLWELVTREVPFADLSNX--------EIGXKVALEGLRPTIPPGIS-- 237
Query: 752 YPAKSLSHFADIISRCVQSEPEFRPPMSEVV 782
H + + C +P RP +V
Sbjct: 238 ------PHVSKLXKICXNEDPAKRPKFDXIV 262
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 25/214 (11%)
Query: 511 FSQENLIGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
++ + IG G G V A K+ +A+KK+ Q L + + R RH NI
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP-FEHQTYXQRTLREIKILLRFRHENI 87
Query: 570 VEL----KGYCAEHGQRLLIYEYCSNGTLQDMLHSD--DELKNNLSWNTRIRMAL-GAAR 622
+ + + E + + I +QD++ +D LK N I L R
Sbjct: 88 IGINDIIRAPTIEQMKDVYI--------VQDLMETDLYKLLKTQHLSNDHICYFLYQILR 139
Query: 623 ALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS--SGSVSQLSGHLLTAY 680
L+Y+H ++HR+ K +N+ + + D GLA + L+ ++ T +
Sbjct: 140 GLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 681 GYGAPE--FESGIYTCQSDVYSFGVVMLELLTGR 712
Y APE S YT D++S G ++ E+L+ R
Sbjct: 197 -YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 107/251 (42%), Gaps = 36/251 (14%)
Query: 517 IGAGMLGSVYRA-QLPDGKLLAVKKL-DKRASSQQKDDEFLELVNNIDRIRHANIVELKG 574
+G G G V+++ G+++AVKK+ D +S F E++ + H NIV L
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 575 YCAEHGQR--LLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQ 632
R L+++Y ++ LH+ N L + + + ++YLH
Sbjct: 77 VLRADNDRDVYLVFDY-----METDLHAVIR-ANILEPVHKQYVVYQLIKVIKYLH---S 127
Query: 633 PPIVHRNFKSANIXXXXXXAVSVSDCGLA-------------PLISSGSVSQLSGH--LL 677
++HR+ K +NI V V+D GL+ PL + + +L
Sbjct: 128 GGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPIL 187
Query: 678 TAY----GYGAPEFESG--IYTCQSDVYSFGVVMLELLTGRKSY--DRTRNRGEQFLVRW 729
T Y Y APE G YT D++S G ++ E+L G+ + T N+ E+ +
Sbjct: 188 TDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVI 247
Query: 730 AIPQLHDIDAL 740
P D++++
Sbjct: 248 DFPSNEDVESI 258
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 10/98 (10%)
Query: 635 IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESGI-YT 693
I+HR+ K +NI + + D GLA ++G+ ++ +++T Y Y APE G+ Y
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRY-YRAPEVILGMGYK 204
Query: 694 CQSDVYSFGVVMLE------LLTGRKSYDRTRNRGEQF 725
D++S G +M E L GR D+ EQ
Sbjct: 205 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 242
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 10/98 (10%)
Query: 635 IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESGI-YT 693
I+HR+ K +NI + + D GLA ++G+ ++ +++T Y Y APE G+ Y
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRY-YRAPEVILGMGYK 203
Query: 694 CQSDVYSFGVVMLE------LLTGRKSYDRTRNRGEQF 725
D++S G +M E L GR D+ EQ
Sbjct: 204 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 241
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 10/98 (10%)
Query: 635 IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESGI-YT 693
I+HR+ K +NI + + D GLA ++G+ ++ +++T Y Y APE G+ Y
Sbjct: 146 IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRY-YRAPEVILGMGYK 202
Query: 694 CQSDVYSFGVVMLE------LLTGRKSYDRTRNRGEQF 725
D++S G +M E L GR D+ EQ
Sbjct: 203 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 240
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 10/98 (10%)
Query: 635 IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESGI-YT 693
I+HR+ K +NI + + D GLA ++G+ ++ +++T Y Y APE G+ Y
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRY-YRAPEVILGMGYK 204
Query: 694 CQSDVYSFGVVMLE------LLTGRKSYDRTRNRGEQF 725
D++S G +M E L GR D+ EQ
Sbjct: 205 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 242
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 89/210 (42%), Gaps = 17/210 (8%)
Query: 511 FSQENLIGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
++Q IG G G V A K +A+KK+ Q L + + R RH N+
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISP-FEHQTYCQRTLREIQILLRFRHENV 103
Query: 570 VELKGYCAEHGQRLLIYEYCSNGTLQDMLHSD--DELKNNLSWNTRIRMAL-GAARALEY 626
+ ++ + Y +QD++ +D LK+ N I L R L+Y
Sbjct: 104 IGIRDILRASTLEAMRDVY----IVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKY 159
Query: 627 LHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI--SSGSVSQLSGHLLTAYGYGA 684
+H ++HR+ K +N+ + + D GLA + L+ + T + Y A
Sbjct: 160 IHSAN---VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRW-YRA 215
Query: 685 PE--FESGIYTCQSDVYSFGVVMLELLTGR 712
PE S YT D++S G ++ E+L+ R
Sbjct: 216 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/283 (19%), Positives = 112/283 (39%), Gaps = 44/283 (15%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIR-HAN-IVELKG 574
IG+G V++ ++ A+K ++ + Q D + + +++++ H++ I+ L
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 575 YCAEHGQRLLIYEYCSNGTLQDMLH---SDDELKNNLSWNTRIRMALGAARALEYLHEIC 631
Y ++ E C N L L S D + W LE +H I
Sbjct: 124 YEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKN----------MLEAVHTIH 172
Query: 632 QPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESGI 691
Q IVH + K AN + + D G+A + + S + + Y PE +
Sbjct: 173 QHGIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 231
Query: 692 YTCQS------------DVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDA 739
+ + DV+S G ++ + G+ + + N+ I +LH I
Sbjct: 232 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ---------ISKLHAI-- 280
Query: 740 LSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVV 782
+DP+ ++P D++ C++ +P+ R + E++
Sbjct: 281 ----IDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 319
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/283 (19%), Positives = 112/283 (39%), Gaps = 44/283 (15%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIR-HAN-IVELKG 574
IG+G V++ ++ A+K ++ + Q D + + +++++ H++ I+ L
Sbjct: 17 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 76
Query: 575 YCAEHGQRLLIYEYCSNGTLQDMLH---SDDELKNNLSWNTRIRMALGAARALEYLHEIC 631
Y ++ E C N L L S D + W LE +H I
Sbjct: 77 YEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKN----------MLEAVHTIH 125
Query: 632 QPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESGI 691
Q IVH + K AN + + D G+A + + S + + Y PE +
Sbjct: 126 QHGIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDM 184
Query: 692 YTCQS------------DVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDA 739
+ + DV+S G ++ + G+ + + N+ I +LH I
Sbjct: 185 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ---------ISKLHAI-- 233
Query: 740 LSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVV 782
+DP+ ++P D++ C++ +P+ R + E++
Sbjct: 234 ----IDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 272
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 25/204 (12%)
Query: 517 IGAGMLGSVYR-AQLPDGKLLAVKKLDKRASSQQKDDEFL-ELVNNIDRIRHANIVELKG 574
+G G G V+R + G A K + + + D E + + + + +RH +V L
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFV---MTPHESDKETVRKEIQTMSVLRHPTLVNLHD 221
Query: 575 YCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPP 634
+ + ++IYE+ S G L + + + N +S + + + L ++HE
Sbjct: 222 AFEDDNEMVMIYEFMSGGELFEKVADE---HNKMSEDEAVEYMRQVCKGLCHMHENN--- 275
Query: 635 IVHRNFKSANIXXXXXXA--VSVSDCGL-APLISSGSVSQLSGHLLTAYGYGAPEFES-- 689
VH + K NI + + + D GL A L SV +G TA + APE
Sbjct: 276 YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTG---TA-EFAAPEVAEGK 331
Query: 690 --GIYTCQSDVYSFGVVMLELLTG 711
G YT D++S GV+ LL+G
Sbjct: 332 PVGYYT---DMWSVGVLSYILLSG 352
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 89/212 (41%), Gaps = 17/212 (8%)
Query: 506 QYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDR-I 564
++++++ + +G G V R L K+ +D + LE I R +
Sbjct: 2 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 61
Query: 565 RHANIVELKGYCAEHGQRLLIYEYCSNGTL-QDMLHSDDELKNNLSWNTRIRMALGAARA 623
+H NIV L E L+++ + G L +D++ E + + I+ L +
Sbjct: 62 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQIL---ES 116
Query: 624 LEYLHEICQPPIVHRNFKSANI---XXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAY 680
+ Y H IVHRN K N+ AV ++D GLA I G T
Sbjct: 117 IAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTP- 170
Query: 681 GYGAPE-FESGIYTCQSDVYSFGVVMLELLTG 711
GY +PE + Y+ D+++ GV++ LL G
Sbjct: 171 GYLSPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 89/212 (41%), Gaps = 17/212 (8%)
Query: 506 QYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDR-I 564
++++++ + +G G V R L K+ +D + LE I R +
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 62
Query: 565 RHANIVELKGYCAEHGQRLLIYEYCSNGTL-QDMLHSDDELKNNLSWNTRIRMALGAARA 623
+H NIV L E L+++ + G L +D++ E + + I+ L +
Sbjct: 63 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQIL---ES 117
Query: 624 LEYLHEICQPPIVHRNFKSANI---XXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAY 680
+ Y H IVHRN K N+ AV ++D GLA I G T
Sbjct: 118 IAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTP- 171
Query: 681 GYGAPE-FESGIYTCQSDVYSFGVVMLELLTG 711
GY +PE + Y+ D+++ GV++ LL G
Sbjct: 172 GYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 95/234 (40%), Gaps = 27/234 (11%)
Query: 496 ARSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDEF 554
ARSF + + + IG G G V A+ G+ +A+KK+
Sbjct: 44 ARSFDVTF--DVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRT 101
Query: 555 LELVNNIDRIRHANIVELKGY---CAEHGQRLLIYEYCS--NGTLQDMLHSDDELKNNLS 609
L + + +H NI+ +K +G+ +Y L ++HS L
Sbjct: 102 LRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLE-- 159
Query: 610 WNTRIRMAL-GAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAP-LISSG 667
+R L R L+Y+H ++HR+ K +N+ + + D G+A L +S
Sbjct: 160 ---HVRYFLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSP 213
Query: 668 SVSQLSGHLLTAY----GYGAPEFESGI--YTCQSDVYSFGVVMLELLTGRKSY 715
+ Q + +T Y Y APE + YT D++S G + E+L R+ +
Sbjct: 214 AEHQ---YFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLF 264
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Query: 635 IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESGI-YT 693
I+HR+ K +NI + + D GLA ++G+ + ++T Y Y APE G+ Y
Sbjct: 149 IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMVPFVVTRY-YRAPEVILGMGYK 205
Query: 694 CQSDVYSFGVVMLELLTG 711
D++S G +M E++ G
Sbjct: 206 ENVDIWSVGCIMGEMIKG 223
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 89/212 (41%), Gaps = 17/212 (8%)
Query: 506 QYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDR-I 564
++++++ + +G G V R L K+ +D + LE I R +
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 62
Query: 565 RHANIVELKGYCAEHGQRLLIYEYCSNGTL-QDMLHSDDELKNNLSWNTRIRMALGAARA 623
+H NIV L E L+++ + G L +D++ E + + I+ L +
Sbjct: 63 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQIL---ES 117
Query: 624 LEYLHEICQPPIVHRNFKSANI---XXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAY 680
+ Y H IVHRN K N+ AV ++D GLA I G T
Sbjct: 118 IAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTP- 171
Query: 681 GYGAPE-FESGIYTCQSDVYSFGVVMLELLTG 711
GY +PE + Y+ D+++ GV++ LL G
Sbjct: 172 GYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 25/214 (11%)
Query: 511 FSQENLIGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
++ + IG G G V A K+ +A+KK+ Q L + + R RH NI
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP-FEHQTYCQRTLREIKILLRFRHENI 83
Query: 570 VEL----KGYCAEHGQRLLIYEYCSNGTLQDMLHSD--DELKNNLSWNTRIRMAL-GAAR 622
+ + + E + + I +QD++ +D LK N I L R
Sbjct: 84 IGINDIIRAPTIEQMKDVYI--------VQDLMETDLYKLLKTQHLSNDHICYFLYQILR 135
Query: 623 ALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS--SGSVSQLSGHLLTAY 680
L+Y+H ++HR+ K +N+ + + D GLA + L+ ++ T +
Sbjct: 136 GLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 681 GYGAPE--FESGIYTCQSDVYSFGVVMLELLTGR 712
Y APE S YT D++S G ++ E+L+ R
Sbjct: 193 -YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 92/214 (42%), Gaps = 25/214 (11%)
Query: 511 FSQENLIGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
++ + IG G G V A K+ +A+KK+ Q L + + R RH NI
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP-FEHQTYCQRTLREIKILLRFRHENI 83
Query: 570 VEL----KGYCAEHGQRLLIYEYCSNGTLQDMLHSD--DELKNNLSWNTRIRMAL-GAAR 622
+ + + E + + I +QD++ +D LK N I L R
Sbjct: 84 IGINDIIRAPTIEQMKDVYI--------VQDLMETDLYKLLKTQHLSNDHICYFLYQILR 135
Query: 623 ALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS--SGSVSQLSGHLLTAY 680
L+Y+H ++HR+ K +N+ + + D GLA + L+ ++ T +
Sbjct: 136 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 681 GYGAPE--FESGIYTCQSDVYSFGVVMLELLTGR 712
Y APE S YT D++S G ++ E+L+ R
Sbjct: 193 -YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 10/98 (10%)
Query: 635 IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESGI-YT 693
I+HR+ K +NI + + D GLA ++G+ ++ +++T Y Y APE G+ Y
Sbjct: 185 IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRY-YRAPEVILGMGYK 241
Query: 694 CQSDVYSFGVVMLE------LLTGRKSYDRTRNRGEQF 725
D++S G +M E L GR D+ EQ
Sbjct: 242 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 279
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 92/214 (42%), Gaps = 25/214 (11%)
Query: 511 FSQENLIGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
++ + IG G G V A K+ +A+KK+ Q L + + R RH NI
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP-FEHQTYCQRTLREIKILLRFRHENI 85
Query: 570 VEL----KGYCAEHGQRLLIYEYCSNGTLQDMLHSD--DELKNNLSWNTRIRMAL-GAAR 622
+ + + E + + I +QD++ +D LK N I L R
Sbjct: 86 IGINDIIRAPTIEQMKDVYI--------VQDLMETDLYKLLKTQHLSNDHICYFLYQILR 137
Query: 623 ALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS--SGSVSQLSGHLLTAY 680
L+Y+H ++HR+ K +N+ + + D GLA + L+ ++ T +
Sbjct: 138 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 681 GYGAPE--FESGIYTCQSDVYSFGVVMLELLTGR 712
Y APE S YT D++S G ++ E+L+ R
Sbjct: 195 -YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 127/305 (41%), Gaps = 56/305 (18%)
Query: 531 PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRI-RHANIVELKGYCAEHGQRLLIYEYC 589
P G+ + V++++ A S + FL+ ++ ++ H NIV + + ++ +
Sbjct: 50 PTGEYVTVRRINLEACSNEMVT-FLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 108
Query: 590 SNGTLQDML--HSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXX 647
+ G+ +D++ H D + N L+ ++ G +AL+Y+H + VHR+ K+++I
Sbjct: 109 AYGSAKDLICTHFMDGM-NELAIAYILQ---GVLKALDYIHHMG---YVHRSVKASHILI 161
Query: 648 XXXXAVSVSDCGL---APLISSGS----VSQLSGHLLTAYGYGAPE-FESGI--YTCQSD 697
V +S GL +IS G V + + + +PE + + Y +SD
Sbjct: 162 SVDGKVYLS--GLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSD 219
Query: 698 VYSFGVVMLELLTGR---KSYDRTRNRGEQFLVRWAIPQLHD---IDALSRMVDPSLS-- 749
+YS G+ EL G K T+ E+ + +P L D I A + PS S
Sbjct: 220 IYSVGITACELANGHVPFKDMPATQMLLEK--LNGTVPCLLDTSTIPAEELTMSPSRSVA 277
Query: 750 -----------------GQYPAKSLS-----HFADIISRCVQSEPEFRPPMSEVV-QDLV 786
G P+ HF + +C+Q P+ RP S ++
Sbjct: 278 NSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFF 337
Query: 787 DMIRR 791
I+R
Sbjct: 338 KQIKR 342
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 90/211 (42%), Gaps = 19/211 (9%)
Query: 511 FSQENLIGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
++ + IG G G V A K+ +A+KK+ Q L + + R RH NI
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP-FEHQTYCQRTLREIKILLRFRHENI 103
Query: 570 VEL----KGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALE 625
+ + + E + + + + L +L + +LS + R L+
Sbjct: 104 IGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKT-----QHLSNDHICYFLYQILRGLK 158
Query: 626 YLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS--SGSVSQLSGHLLTAYGYG 683
Y+H ++HR+ K +N+ + + D GLA + L+ ++ T + Y
Sbjct: 159 YIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW-YR 214
Query: 684 APE--FESGIYTCQSDVYSFGVVMLELLTGR 712
APE S YT D++S G ++ E+L+ R
Sbjct: 215 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 92/214 (42%), Gaps = 25/214 (11%)
Query: 511 FSQENLIGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
++ + IG G G V A K+ +A+KK+ Q L + + R RH NI
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP-FEHQTYCQRTLREIKILLRFRHENI 91
Query: 570 VEL----KGYCAEHGQRLLIYEYCSNGTLQDMLHSD--DELKNNLSWNTRIRMAL-GAAR 622
+ + + E + + I +QD++ +D LK N I L R
Sbjct: 92 IGINDIIRAPTIEQMKDVYI--------VQDLMETDLYKLLKTQHLSNDHICYFLYQILR 143
Query: 623 ALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS--SGSVSQLSGHLLTAY 680
L+Y+H ++HR+ K +N+ + + D GLA + L+ ++ T +
Sbjct: 144 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 200
Query: 681 GYGAPE--FESGIYTCQSDVYSFGVVMLELLTGR 712
Y APE S YT D++S G ++ E+L+ R
Sbjct: 201 -YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 92/214 (42%), Gaps = 25/214 (11%)
Query: 511 FSQENLIGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
++ + IG G G V A K+ +A+KK+ Q L + + R RH NI
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP-FEHQTYCQRTLREIKILLRFRHENI 83
Query: 570 VEL----KGYCAEHGQRLLIYEYCSNGTLQDMLHSD--DELKNNLSWNTRIRMAL-GAAR 622
+ + + E + + I +QD++ +D LK N I L R
Sbjct: 84 IGINDIIRAPTIEQMKDVYI--------VQDLMETDLYKLLKTQHLSNDHICYFLYQILR 135
Query: 623 ALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS--SGSVSQLSGHLLTAY 680
L+Y+H ++HR+ K +N+ + + D GLA + L+ ++ T +
Sbjct: 136 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 681 GYGAPE--FESGIYTCQSDVYSFGVVMLELLTGR 712
Y APE S YT D++S G ++ E+L+ R
Sbjct: 193 -YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 92/214 (42%), Gaps = 25/214 (11%)
Query: 511 FSQENLIGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
++ + IG G G V A K+ +A+KK+ Q L + + R RH NI
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP-FEHQTYCQRTLREIKILLRFRHENI 103
Query: 570 VEL----KGYCAEHGQRLLIYEYCSNGTLQDMLHSD--DELKNNLSWNTRIRMAL-GAAR 622
+ + + E + + I +QD++ +D LK N I L R
Sbjct: 104 IGINDIIRAPTIEQMKDVYI--------VQDLMETDLYKLLKTQHLSNDHICYFLYQILR 155
Query: 623 ALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS--SGSVSQLSGHLLTAY 680
L+Y+H ++HR+ K +N+ + + D GLA + L+ ++ T +
Sbjct: 156 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 212
Query: 681 GYGAPE--FESGIYTCQSDVYSFGVVMLELLTGR 712
Y APE S YT D++S G ++ E+L+ R
Sbjct: 213 -YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 127/305 (41%), Gaps = 56/305 (18%)
Query: 531 PDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRI-RHANIVELKGYCAEHGQRLLIYEYC 589
P G+ + V++++ A S + FL+ ++ ++ H NIV + + ++ +
Sbjct: 34 PTGEYVTVRRINLEACSNEMVT-FLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 92
Query: 590 SNGTLQDML--HSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXX 647
+ G+ +D++ H D + N L+ ++ G +AL+Y+H + VHR+ K+++I
Sbjct: 93 AYGSAKDLICTHFMDGM-NELAIAYILQ---GVLKALDYIHHMG---YVHRSVKASHILI 145
Query: 648 XXXXAVSVSDCGL---APLISSGS----VSQLSGHLLTAYGYGAPE-FESGI--YTCQSD 697
V +S GL +IS G V + + + +PE + + Y +SD
Sbjct: 146 SVDGKVYLS--GLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSD 203
Query: 698 VYSFGVVMLELLTGR---KSYDRTRNRGEQFLVRWAIPQLHD---IDALSRMVDPSLS-- 749
+YS G+ EL G K T+ E+ + +P L D I A + PS S
Sbjct: 204 IYSVGITACELANGHVPFKDMPATQMLLEK--LNGTVPCLLDTSTIPAEELTMSPSRSVA 261
Query: 750 -----------------GQYPAKSLS-----HFADIISRCVQSEPEFRPPMSEVV-QDLV 786
G P+ HF + +C+Q P+ RP S ++
Sbjct: 262 NSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFF 321
Query: 787 DMIRR 791
I+R
Sbjct: 322 KQIKR 326
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 25/214 (11%)
Query: 511 FSQENLIGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
++ + IG G G V A K+ +A+KK+ Q L + + R RH NI
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP-FEHQTYCQRTLREIKILLRFRHENI 83
Query: 570 VEL----KGYCAEHGQRLLIYEYCSNGTLQDMLHSD--DELKNNLSWNTRIRMAL-GAAR 622
+ + + E + + I +QD++ +D LK N I L R
Sbjct: 84 IGINDIIRAPTIEQMKDVYI--------VQDLMETDLYKLLKTQHLSNDHICYFLYQILR 135
Query: 623 ALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS--SGSVSQLSGHLLTAY 680
L+Y+H ++HR+ K +N+ + + D GLA + L+ ++ T +
Sbjct: 136 GLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 681 GYGAPE--FESGIYTCQSDVYSFGVVMLELLTGR 712
Y APE S YT D++S G ++ E+L+ R
Sbjct: 193 -YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 10/98 (10%)
Query: 635 IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESGI-YT 693
I+HR+ K +NI + + D GLA ++G+ ++ +++T Y Y APE G+ Y
Sbjct: 185 IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRY-YRAPEVILGMGYK 241
Query: 694 CQSDVYSFGVVMLE------LLTGRKSYDRTRNRGEQF 725
D++S G +M E L GR D+ EQ
Sbjct: 242 ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 279
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 10/98 (10%)
Query: 635 IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESGI-YT 693
I+HR+ K +NI + + D GLA ++G+ ++ +++T Y Y APE G+ Y
Sbjct: 141 IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRY-YRAPEVILGMGYK 197
Query: 694 CQSDVYSFGVVMLE------LLTGRKSYDRTRNRGEQF 725
D++S G +M E L GR D+ EQ
Sbjct: 198 ENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQL 235
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 25/214 (11%)
Query: 511 FSQENLIGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
++ + IG G G V A K+ +A+KK+ Q L + + R RH NI
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP-FEHQTYCQRTLREIKILLRFRHENI 83
Query: 570 VEL----KGYCAEHGQRLLIYEYCSNGTLQDMLHSD--DELKNNLSWNTRIRMAL-GAAR 622
+ + + E + + I +QD++ +D LK N I L R
Sbjct: 84 IGINDIIRAPTIEQMKDVYI--------VQDLMETDLYKLLKTQHLSNDHICYFLYQILR 135
Query: 623 ALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS--SGSVSQLSGHLLTAY 680
L+Y+H ++HR+ K +N+ + + D GLA + L+ ++ T +
Sbjct: 136 GLKYIHSAN---VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 681 GYGAPE--FESGIYTCQSDVYSFGVVMLELLTGR 712
Y APE S YT D++S G ++ E+L+ R
Sbjct: 193 -YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/222 (19%), Positives = 93/222 (41%), Gaps = 36/222 (16%)
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
++V G+ + ++ E C +L + LH + +R + + ++YL
Sbjct: 103 HVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTI---QGVQYL 158
Query: 628 HEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEF 687
H ++HR+ K N+ V + D GLA I + + L Y APE
Sbjct: 159 H---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT--LCGTPNYIAPEV 213
Query: 688 --ESGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVR---WAIPQLHDIDALSR 742
+ G ++ + D++S G ++ LL G+ ++ + + ++ +++P R
Sbjct: 214 LCKKG-HSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVP---------R 263
Query: 743 MVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQD 784
++P S +I R + ++P RP ++E++ D
Sbjct: 264 HINPVASA------------LIRRMLHADPTLRPSVAELLTD 293
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 92/214 (42%), Gaps = 25/214 (11%)
Query: 511 FSQENLIGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
++ + IG G G V A K+ +A+KK+ Q L + + R RH NI
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP-FEHQTYCQRTLREIKILLRFRHENI 81
Query: 570 VEL----KGYCAEHGQRLLIYEYCSNGTLQDMLHSD--DELKNNLSWNTRIRMAL-GAAR 622
+ + + E + + I +QD++ +D LK N I L R
Sbjct: 82 IGINDIIRAPTIEQMKDVYI--------VQDLMETDLYKLLKTQHLSNDHICYFLYQILR 133
Query: 623 ALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS--SGSVSQLSGHLLTAY 680
L+Y+H ++HR+ K +N+ + + D GLA + L+ ++ T +
Sbjct: 134 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 190
Query: 681 GYGAPE--FESGIYTCQSDVYSFGVVMLELLTGR 712
Y APE S YT D++S G ++ E+L+ R
Sbjct: 191 -YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 25/214 (11%)
Query: 511 FSQENLIGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
++ + IG G G V A K+ +A+KK+ Q L + + R RH NI
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP-FEHQTYCQRTLREIKILLRFRHENI 87
Query: 570 VEL----KGYCAEHGQRLLIYEYCSNGTLQDMLHSD--DELKNNLSWNTRIRMAL-GAAR 622
+ + + E + + I +QD++ +D LK N I L R
Sbjct: 88 IGINDIIRAPTIEQMKDVYI--------VQDLMETDLYKLLKTQHLSNDHICYFLYQILR 139
Query: 623 ALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS--SGSVSQLSGHLLTAY 680
L+Y+H ++HR+ K +N+ + + D GLA + L+ ++ T +
Sbjct: 140 GLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 681 GYGAPE--FESGIYTCQSDVYSFGVVMLELLTGR 712
Y APE S YT D++S G ++ E+L+ R
Sbjct: 197 -YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 92/214 (42%), Gaps = 25/214 (11%)
Query: 511 FSQENLIGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
++ + IG G G V A K+ +A+KK+ Q L + + R RH NI
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP-FEHQTYCQRTLREIKILLRFRHENI 88
Query: 570 VEL----KGYCAEHGQRLLIYEYCSNGTLQDMLHSD--DELKNNLSWNTRIRMAL-GAAR 622
+ + + E + + I +QD++ +D LK N I L R
Sbjct: 89 IGINDIIRAPTIEQMKDVYI--------VQDLMETDLYKLLKTQHLSNDHICYFLYQILR 140
Query: 623 ALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS--SGSVSQLSGHLLTAY 680
L+Y+H ++HR+ K +N+ + + D GLA + L+ ++ T +
Sbjct: 141 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 197
Query: 681 GYGAPE--FESGIYTCQSDVYSFGVVMLELLTGR 712
Y APE S YT D++S G ++ E+L+ R
Sbjct: 198 -YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 92/214 (42%), Gaps = 25/214 (11%)
Query: 511 FSQENLIGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
++ + IG G G V A K+ +A+KK+ Q L + + R RH NI
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP-FEHQTYCQRTLREIKILLRFRHENI 89
Query: 570 VEL----KGYCAEHGQRLLIYEYCSNGTLQDMLHSD--DELKNNLSWNTRIRMAL-GAAR 622
+ + + E + + I +QD++ +D LK N I L R
Sbjct: 90 IGINDIIRAPTIEQMKDVYI--------VQDLMETDLYKLLKTQHLSNDHICYFLYQILR 141
Query: 623 ALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS--SGSVSQLSGHLLTAY 680
L+Y+H ++HR+ K +N+ + + D GLA + L+ ++ T +
Sbjct: 142 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 198
Query: 681 GYGAPE--FESGIYTCQSDVYSFGVVMLELLTGR 712
Y APE S YT D++S G ++ E+L+ R
Sbjct: 199 -YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 92/214 (42%), Gaps = 25/214 (11%)
Query: 511 FSQENLIGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
++ + IG G G V A K+ +A+KK+ Q L + + R RH NI
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP-FEHQTYCQRTLREIKILLRFRHENI 80
Query: 570 VEL----KGYCAEHGQRLLIYEYCSNGTLQDMLHSD--DELKNNLSWNTRIRMAL-GAAR 622
+ + + E + + I +QD++ +D LK N I L R
Sbjct: 81 IGINDIIRAPTIEQMKDVYI--------VQDLMETDLYKLLKTQHLSNDHICYFLYQILR 132
Query: 623 ALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS--SGSVSQLSGHLLTAY 680
L+Y+H ++HR+ K +N+ + + D GLA + L+ ++ T +
Sbjct: 133 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 189
Query: 681 GYGAPE--FESGIYTCQSDVYSFGVVMLELLTGR 712
Y APE S YT D++S G ++ E+L+ R
Sbjct: 190 -YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 92/214 (42%), Gaps = 25/214 (11%)
Query: 511 FSQENLIGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
++ + IG G G V A K+ +A+KK+ Q L + + R RH NI
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP-FEHQTYCQRTLREIKILLRFRHENI 87
Query: 570 VEL----KGYCAEHGQRLLIYEYCSNGTLQDMLHSD--DELKNNLSWNTRIRMAL-GAAR 622
+ + + E + + I +QD++ +D LK N I L R
Sbjct: 88 IGINDIIRAPTIEQMKDVYI--------VQDLMETDLYKLLKTQHLSNDHICYFLYQILR 139
Query: 623 ALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS--SGSVSQLSGHLLTAY 680
L+Y+H ++HR+ K +N+ + + D GLA + L+ ++ T +
Sbjct: 140 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 681 GYGAPE--FESGIYTCQSDVYSFGVVMLELLTGR 712
Y APE S YT D++S G ++ E+L+ R
Sbjct: 197 -YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 92/214 (42%), Gaps = 25/214 (11%)
Query: 511 FSQENLIGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
++ + IG G G V A K+ +A+KK+ Q L + + R RH NI
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP-FEHQTYCQRTLREIKILLRFRHENI 81
Query: 570 VEL----KGYCAEHGQRLLIYEYCSNGTLQDMLHSD--DELKNNLSWNTRIRMAL-GAAR 622
+ + + E + + I +QD++ +D LK N I L R
Sbjct: 82 IGINDIIRAPTIEQMKDVYI--------VQDLMETDLYKLLKTQHLSNDHICYFLYQILR 133
Query: 623 ALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS--SGSVSQLSGHLLTAY 680
L+Y+H ++HR+ K +N+ + + D GLA + L+ ++ T +
Sbjct: 134 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 190
Query: 681 GYGAPE--FESGIYTCQSDVYSFGVVMLELLTGR 712
Y APE S YT D++S G ++ E+L+ R
Sbjct: 191 -YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 94/235 (40%), Gaps = 36/235 (15%)
Query: 509 NSFSQENLIGAGMLGSVYRAQLPDG-KLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+++ ++LIG G G VY A + K +A+KK+++ L + ++R++
Sbjct: 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 85
Query: 568 NIVELKGYCAEHG----QRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARA 623
I+ L L I ++ L+ + + L + LG
Sbjct: 86 YIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGE--- 142
Query: 624 LEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVS------------- 670
++HE I+HR+ K AN +V V D GLA I+S +
Sbjct: 143 -NFIHE---SGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPG 198
Query: 671 --------QLSGHLLTAYGYGAPE--FESGIYTCQSDVYSFGVVMLELLTGRKSY 715
QL+ H++T + Y APE YT D++S G + ELL +S+
Sbjct: 199 PHNKNLKKQLTSHVVTRW-YRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSH 252
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/222 (19%), Positives = 92/222 (41%), Gaps = 36/222 (16%)
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
++V G+ + ++ E C +L + LH + +R + + ++YL
Sbjct: 103 HVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTI---QGVQYL 158
Query: 628 HEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEF 687
H ++HR+ K N+ V + D GLA I + L Y APE
Sbjct: 159 H---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFD--GERKKDLCGTPNYIAPEV 213
Query: 688 --ESGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVR---WAIPQLHDIDALSR 742
+ G ++ + D++S G ++ LL G+ ++ + + ++ +++P R
Sbjct: 214 LCKKG-HSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVP---------R 263
Query: 743 MVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQD 784
++P S +I R + ++P RP ++E++ D
Sbjct: 264 HINPVASA------------LIRRMLHADPTLRPSVAELLTD 293
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 10/98 (10%)
Query: 635 IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESGI-YT 693
I+HR+ K +NI + + D GLA ++G+ ++ +++T Y Y APE G+ Y
Sbjct: 152 IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRY-YRAPEVILGMGYK 208
Query: 694 CQSDVYSFGVVMLE------LLTGRKSYDRTRNRGEQF 725
D++S G +M E L GR D+ EQ
Sbjct: 209 ENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQL 246
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/222 (19%), Positives = 92/222 (41%), Gaps = 36/222 (16%)
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
++V G+ + ++ E C +L + LH + +R + + ++YL
Sbjct: 103 HVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTI---QGVQYL 158
Query: 628 HEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEF 687
H ++HR+ K N+ V + D GLA I + L Y APE
Sbjct: 159 H---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFD--GERKKXLCGTPNYIAPEV 213
Query: 688 --ESGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVR---WAIPQLHDIDALSR 742
+ G ++ + D++S G ++ LL G+ ++ + + ++ +++P R
Sbjct: 214 LCKKG-HSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVP---------R 263
Query: 743 MVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQD 784
++P S +I R + ++P RP ++E++ D
Sbjct: 264 HINPVASA------------LIRRMLHADPTLRPSVAELLTD 293
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 95/234 (40%), Gaps = 27/234 (11%)
Query: 496 ARSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQLP-DGKLLAVKKLDKRASSQQKDDEF 554
ARSF + + + IG G G V A+ G+ +A+KK+
Sbjct: 43 ARSFDVTF--DVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRT 100
Query: 555 LELVNNIDRIRHANIVELKGY---CAEHGQRLLIYEYCS--NGTLQDMLHSDDELKNNLS 609
L + + +H NI+ +K +G+ +Y L ++HS L
Sbjct: 101 LRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLE-- 158
Query: 610 WNTRIRMAL-GAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAP-LISSG 667
+R L R L+Y+H ++HR+ K +N+ + + D G+A L +S
Sbjct: 159 ---HVRYFLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSP 212
Query: 668 SVSQLSGHLLTAY----GYGAPEFESGI--YTCQSDVYSFGVVMLELLTGRKSY 715
+ Q + +T Y Y APE + YT D++S G + E+L R+ +
Sbjct: 213 AEHQ---YFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLF 263
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/222 (19%), Positives = 92/222 (41%), Gaps = 36/222 (16%)
Query: 568 NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYL 627
++V G+ + ++ E C +L + LH + +R + + ++YL
Sbjct: 87 HVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTI---QGVQYL 142
Query: 628 HEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEF 687
H ++HR+ K N+ V + D GLA I + L Y APE
Sbjct: 143 H---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFD--GERKKDLCGTPNYIAPEV 197
Query: 688 --ESGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVR---WAIPQLHDIDALSR 742
+ G ++ + D++S G ++ LL G+ ++ + + ++ +++P R
Sbjct: 198 LCKKG-HSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVP---------R 247
Query: 743 MVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQD 784
++P S +I R + ++P RP ++E++ D
Sbjct: 248 HINPVASA------------LIRRMLHADPTLRPSVAELLTD 277
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 105/277 (37%), Gaps = 33/277 (11%)
Query: 506 QYTNSFSQENLIGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRI 564
Q+T+ + + IG G R AVK +DK ++ E L +
Sbjct: 19 QFTDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEIEIL-----LRYG 73
Query: 565 RHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARAL 624
+H NI+ LK + ++ E G L D + + S + + +
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILR----QKFFSEREASAVLFTITKTV 129
Query: 625 EYLHEICQPPIVHRNFKSANIXXXXXX----AVSVSDCGLAPLISSGSVSQLSGHLLTAY 680
EYLH +VHR+ K +NI ++ + D G A + + + L TA
Sbjct: 130 EYLHA---QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN-GLLXTPCYTA- 184
Query: 681 GYGAPE-FESGIYTCQSDVYSFGVVMLELLTGRKSY-DRTRNRGEQFLVRWAIPQLHDID 738
+ APE E Y D++S GV++ LTG + + + E+ L R +
Sbjct: 185 NFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKF---- 240
Query: 739 ALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFR 775
SLSG Y D++S+ + +P R
Sbjct: 241 --------SLSGGYWNSVSDTAKDLVSKXLHVDPHQR 269
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 93/214 (43%), Gaps = 25/214 (11%)
Query: 511 FSQENLIGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
++ + IG G G V A K+ +A+KK+ Q L + + R RH NI
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP-FEHQTYCQRTLREIKILLRFRHENI 87
Query: 570 VEL----KGYCAEHGQRLLIYEYCSNGTLQDMLHSD--DELK-NNLSWNTRIRMALGAAR 622
+ + + E + + I +QD++ +D LK +LS + R
Sbjct: 88 IGINDIIRAPTIEQMKDVYI--------VQDLMETDLYKLLKCQHLSNDHICYFLYQILR 139
Query: 623 ALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS--SGSVSQLSGHLLTAY 680
L+Y+H ++HR+ K +N+ + + D GLA + L+ ++ T +
Sbjct: 140 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 681 GYGAPE--FESGIYTCQSDVYSFGVVMLELLTGR 712
Y APE S YT D++S G ++ E+L+ R
Sbjct: 197 -YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 10/98 (10%)
Query: 635 IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESGI-YT 693
I+HR+ K +NI + + D GLA ++G+ + ++T Y Y APE G+ Y
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMEPEVVTRY-YRAPEVILGMGYK 203
Query: 694 CQSDVYSFGVVMLE------LLTGRKSYDRTRNRGEQF 725
D++S G +M E L GR D+ EQ
Sbjct: 204 ENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQL 241
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 94/227 (41%), Gaps = 34/227 (14%)
Query: 501 IASLQQYTNSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVN 559
I LQ + +IG G G V + K+ A+K L K ++ D F
Sbjct: 67 IRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEER 126
Query: 560 NIDRIRHAN---IVELKGYCAEHGQRLL--IYEYCSNGTLQDMLHSDDELKNNLSWNT-R 613
+I + AN +V+L +CA + L + EY G L +++ + D + + T
Sbjct: 127 DI--MAFANSPWVVQL--FCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAE 182
Query: 614 IRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA-PLISSGSVSQL 672
+ +AL A ++ ++HR+ K N+ + ++D G + +G V
Sbjct: 183 VVLALDAIHSM---------GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMV--- 230
Query: 673 SGHLLTAYG---YGAPEF-----ESGIYTCQSDVYSFGVVMLELLTG 711
H TA G Y +PE G Y + D +S GV + E+L G
Sbjct: 231 --HCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 92/214 (42%), Gaps = 25/214 (11%)
Query: 511 FSQENLIGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
++ + IG G G V A K+ +A++K+ Q L + + R RH NI
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISP-FEHQTYCQRTLREIKILLRFRHENI 87
Query: 570 VEL----KGYCAEHGQRLLIYEYCSNGTLQDMLHSD--DELKNNLSWNTRIRMAL-GAAR 622
+ + + E + + I +QD++ +D LK N I L R
Sbjct: 88 IGINDIIRAPTIEQMKDVYI--------VQDLMETDLYKLLKTQHLSNDHICYFLYQILR 139
Query: 623 ALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS--SGSVSQLSGHLLTAY 680
L+Y+H ++HR+ K +N+ + + D GLA + L+ ++ T +
Sbjct: 140 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 681 GYGAPE--FESGIYTCQSDVYSFGVVMLELLTGR 712
Y APE S YT D++S G ++ E+L+ R
Sbjct: 197 -YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 86/211 (40%), Gaps = 21/211 (9%)
Query: 507 YTNSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIR 565
+ + F + +G G G V + + G A+K LDK+ + K+ +E N RI
Sbjct: 39 HLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKE---IEHTLNEKRIL 95
Query: 566 HA----NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAA 621
A +V+L+ ++ ++ EY G + L + ++ L
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL--- 152
Query: 622 RALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYG 681
EYLH + +++R+ K N+ + V+D GLA + G L G
Sbjct: 153 -TFEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGLAKRV-KGRTWXLCG----TPE 203
Query: 682 YGAPE-FESGIYTCQSDVYSFGVVMLELLTG 711
Y APE S Y D ++ GV++ E+ G
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 86/211 (40%), Gaps = 21/211 (9%)
Query: 507 YTNSFSQENLIGAGMLGSVYRAQ-LPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIR 565
+ + F + +G G G V + + G A+K LDK+ + K+ +E N RI
Sbjct: 39 HLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKE---IEHTLNEKRIL 95
Query: 566 HA----NIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAA 621
A +V+L+ ++ ++ EY G + L + ++ L
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL--- 152
Query: 622 RALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYG 681
EYLH + +++R+ K N+ + V+D GLA + G L G
Sbjct: 153 -TFEYLHSL---DLIYRDLKPENLMIDQQGYIQVTDFGLAKRV-KGRTWXLCG----TPE 203
Query: 682 YGAPE-FESGIYTCQSDVYSFGVVMLELLTG 711
Y APE S Y D ++ GV++ E+ G
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 55/283 (19%), Positives = 110/283 (38%), Gaps = 44/283 (15%)
Query: 517 IGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIR-HAN-IVELKG 574
IG+G V++ ++ A+K ++ + Q D + + +++++ H++ I+ L
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 95
Query: 575 YCAEHGQRLLIYEYCSNGTLQDMLH---SDDELKNNLSWNTRIRMALGAARALEYLHEIC 631
Y ++ E C N L L S D + W LE +H I
Sbjct: 96 YEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKN----------MLEAVHTIH 144
Query: 632 QPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESGI 691
Q IVH + K AN + + D G+A + + + Y PE +
Sbjct: 145 QHGIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDM 203
Query: 692 YTCQS------------DVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDA 739
+ + DV+S G ++ + G+ + + N+ I +LH I
Sbjct: 204 SSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ---------ISKLHAI-- 252
Query: 740 LSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVV 782
+DP+ ++P D++ C++ +P+ R + E++
Sbjct: 253 ----IDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 291
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 10/98 (10%)
Query: 635 IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESGI-YT 693
I+HR+ K +NI + + D GLA ++G+ + ++T Y Y APE G+ Y
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMEPEVVTRY-YRAPEVILGMGYK 203
Query: 694 CQSDVYSFGVVMLE------LLTGRKSYDRTRNRGEQF 725
D++S G +M E L GR D+ EQ
Sbjct: 204 ENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQL 241
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 622 RALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS--SGSVSQLSGHLLTA 679
R L+Y+H ++HR+ K +N+ + + D GLA + L+ ++ T
Sbjct: 137 RGLKYIH---SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 680 YGYGAPE--FESGIYTCQSDVYSFGVVMLELLTGR 712
+ Y APE S YT D++S G ++ E+L+ R
Sbjct: 194 W-YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 85/192 (44%), Gaps = 24/192 (12%)
Query: 536 LAVKKLDKR-ASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTL 594
AVK + KR ++ QK+ L+L H NIV+L + L+ E + G L
Sbjct: 39 FAVKIISKRMEANTQKEITALKLCEG-----HPNIVKLHEVFHDQLHTFLVMELLNGGEL 93
Query: 595 QDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXX---X 651
+ + K + S + A+ ++H++ +VHR+ K N+
Sbjct: 94 FERIKK----KKHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNL 146
Query: 652 AVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEF--ESGIYTCQSDVYSFGVVMLELL 709
+ + D G A L + L T + Y APE ++G Y D++S GV++ +L
Sbjct: 147 EIKIIDFGFARLKPPDN-QPLKTPCFTLH-YAAPELLNQNG-YDESCDLWSLGVILYTML 203
Query: 710 TGR---KSYDRT 718
+G+ +S+DR+
Sbjct: 204 SGQVPFQSHDRS 215
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 97/218 (44%), Gaps = 27/218 (12%)
Query: 509 NSFSQENLIGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHA 567
+ F E + G G G+V + G +A+KK+ + + ++ L+++ ++ + H
Sbjct: 23 DRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRE---LQIMQDLAVLHHP 79
Query: 568 NIVELKGYCAEHGQRLL--IYEYCSNGTLQDMLHS---DDELKNNLSWNTRIRMAL-GAA 621
NIV+L+ Y G+R IY + D LH + + I++ L
Sbjct: 80 NIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLI 139
Query: 622 RALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLS------GH 675
R++ LH + + HR+ K N+ V+ +D G L GS +LS +
Sbjct: 140 RSIGCLH-LPSVNVCHRDIKPHNVL------VNEAD-GTLKLCDFGSAKKLSPSEPNVAY 191
Query: 676 LLTAYGYGAPE--FESGIYTCQSDVYSFGVVMLELLTG 711
+ + Y Y APE F + YT D++S G + E++ G
Sbjct: 192 ICSRY-YRAPELIFGNQHYTTAVDIWSVGCIFAEMMLG 228
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 88/213 (41%), Gaps = 23/213 (10%)
Query: 511 FSQENLIGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
++ + IG G G V A K+ +A+KK+ Q L + + R RH NI
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP-FEHQTYCQRTLREIKILLRFRHENI 87
Query: 570 VEL----KGYCAEHGQRLLIYEYCSNGTLQDMLHSD--DELKNNLSWNTRIRMAL-GAAR 622
+ + + E + + I +QD++ +D LK N I L R
Sbjct: 88 IGINDIIRAPTIEQMKDVYI--------VQDLMETDLYKLLKTQHLSNDHICYFLYQILR 139
Query: 623 ALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS-SGSVSQLSGHLLTAYG 681
L+Y+H ++HR+ K +N+ + + D GLA + + +
Sbjct: 140 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRW 196
Query: 682 YGAPE--FESGIYTCQSDVYSFGVVMLELLTGR 712
Y APE S YT D++S G ++ E+L+ R
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 88/213 (41%), Gaps = 23/213 (10%)
Query: 511 FSQENLIGAGMLGSVYRAQLPDGKL-LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANI 569
++ + IG G G V A K+ +A+KK+ Q L + + R RH NI
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP-FEHQTYCQRTLREIKILLRFRHENI 88
Query: 570 VEL----KGYCAEHGQRLLIYEYCSNGTLQDMLHSD--DELKNNLSWNTRIRMAL-GAAR 622
+ + + E + + I +QD++ +D LK N I L R
Sbjct: 89 IGINDIIRAPTIEQMKDVYI--------VQDLMETDLYKLLKTQHLSNDHICYFLYQILR 140
Query: 623 ALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS-SGSVSQLSGHLLTAYG 681
L+Y+H ++HR+ K +N+ + + D GLA + + +
Sbjct: 141 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRW 197
Query: 682 YGAPE--FESGIYTCQSDVYSFGVVMLELLTGR 712
Y APE S YT D++S G ++ E+L+ R
Sbjct: 198 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 622 RALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS--SGSVSQLSGHLLTA 679
R L+Y+H ++HR+ K +N+ + + D GLA + L+ ++ T
Sbjct: 137 RGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 680 YGYGAPE--FESGIYTCQSDVYSFGVVMLELLTGR 712
+ Y APE S YT D++S G ++ E+L+ R
Sbjct: 194 W-YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3G3A|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|C Chain C, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|E Chain E, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|G Chain G, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
Length = 178
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 107 VIDLSNNHIGGSIPSILPVTMQNFFLSDNQFSGSIPSSLATLTLLTDMSLNNNLLSGEIP 166
+D S + S+P+ +P T Q +L DNQ + P LT LT + L+NN L+
Sbjct: 21 TVDCSGKSLA-SVPTGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPA 79
Query: 167 DAFQSLTGL 175
F LT L
Sbjct: 80 GVFDKLTQL 88
>pdb|3G3B|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|C Chain C, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|E Chain E, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|G Chain G, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
Length = 170
Score = 37.7 bits (86), Expect = 0.026, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 30/59 (50%)
Query: 117 GSIPSILPVTMQNFFLSDNQFSGSIPSSLATLTLLTDMSLNNNLLSGEIPDAFQSLTGL 175
S+P+ +P T Q +L DN+ + P LT LT + L+NN L+ F LT L
Sbjct: 22 ASVPTGIPTTTQVLYLYDNRITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQL 80
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 91/237 (38%), Gaps = 41/237 (17%)
Query: 506 QYTNSFSQENLIGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRI 564
Q + + +LIG G G V A + +++A+KK+ + L + ++R+
Sbjct: 50 QIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRL 109
Query: 565 RHANIVELKGYC----AEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGA 620
H ++V++ E L + ++ + + + L L T + L
Sbjct: 110 NHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYL-TELHIKTLLYNLLVG 168
Query: 621 ARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLI---------------- 664
+ Y+H I+HR+ K AN +V V D GLA +
Sbjct: 169 VK---YVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPRE 222
Query: 665 ----------SSGSVSQLSGHLLTAYGYGAPE--FESGIYTCQSDVYSFGVVMLELL 709
+ QL+GH++T + Y APE YT DV+S G + ELL
Sbjct: 223 DDMNLVTFPHTKNLKRQLTGHVVTRW-YRAPELILLQENYTEAIDVWSIGCIFAELL 278
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 47/244 (19%), Positives = 94/244 (38%), Gaps = 37/244 (15%)
Query: 501 IASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQK----DDEF-- 554
IA L + ++ + I +G G+V +G +A+K++ S + D F
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC 73
Query: 555 ---LELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWN 611
L + ++ H NI+ L+ I+ + + + + ++ +L+
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRD----------IFVHFEEPAMHKLYLVTELMRTDLAQV 123
Query: 612 TRIRMALGAARALEY--------LHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPL 663
+ + + + ++Y LH + + +VHR+ NI +++ D LA
Sbjct: 124 IHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLA-- 181
Query: 664 ISSGSVSQLSGHLLTAYGYGAPEFESGI--YTCQSDVYSFGVVMLELLTGRKSYDRTRNR 721
+ H +T Y APE +T D++S G VM E+ + + R
Sbjct: 182 -REDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALF-----R 235
Query: 722 GEQF 725
G F
Sbjct: 236 GSTF 239
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 37.4 bits (85), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 47/244 (19%), Positives = 94/244 (38%), Gaps = 37/244 (15%)
Query: 501 IASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQK----DDEF-- 554
IA L + ++ + I +G G+V +G +A+K++ S + D F
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC 73
Query: 555 ---LELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWN 611
L + ++ H NI+ L+ I+ + + + + ++ +L+
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRD----------IFVHFEEPAMHKLYLVTELMRTDLAQV 123
Query: 612 TRIRMALGAARALEY--------LHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPL 663
+ + + + ++Y LH + + +VHR+ NI +++ D LA
Sbjct: 124 IHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLA-- 181
Query: 664 ISSGSVSQLSGHLLTAYGYGAPEFESGI--YTCQSDVYSFGVVMLELLTGRKSYDRTRNR 721
+ H +T Y APE +T D++S G VM E+ + + R
Sbjct: 182 -REDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALF-----R 235
Query: 722 GEQF 725
G F
Sbjct: 236 GSTF 239
>pdb|3G39|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor
Length = 170
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 107 VIDLSNNHIGGSIPSILPVTMQNFFLSDNQFSGSIPSSLATLTLLTDMSLNNNLLSGEIP 166
+D S + S+P+ +P T Q +L DNQ + P LT LT + L+NN L+
Sbjct: 13 TVDCSGKSLA-SVPTGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPA 71
Query: 167 DAFQSLTGL 175
F LT L
Sbjct: 72 GVFDKLTQL 80
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 37.0 bits (84), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 86/229 (37%), Gaps = 47/229 (20%)
Query: 511 FSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLEL------------- 557
F QEN+ G +L GK VKK ++++ Q +F++
Sbjct: 4 FRQENVDDYYDTGE----ELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE 59
Query: 558 -----VNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNT 612
V+ + I+H N++ L +LI E + G L D L K +L+
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEE 115
Query: 613 RIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXA----VSVSDCGLAPLISSGS 668
+ YLH + I H + K NI + + D GLA I G+
Sbjct: 116 ATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN 172
Query: 669 VSQLSGHLLTAYGYGAPEF---ESGIYT---CQSDVYSFGVVMLELLTG 711
+ +G PEF E Y ++D++S GV+ LL+G
Sbjct: 173 EFK--------NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 37.0 bits (84), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 87/225 (38%), Gaps = 39/225 (17%)
Query: 511 FSQENL---------IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKD----DEFLE 556
F QEN+ +G+G+ V + + G A K + KR + + ++
Sbjct: 4 FRQENVDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 557 LVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRM 616
V+ + I+H N++ L +LI E + G L D L K +L+
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEF 119
Query: 617 ALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXA----VSVSDCGLAPLISSGSVSQL 672
+ YLH + I H + K NI + + D GLA I G+ +
Sbjct: 120 LKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK- 175
Query: 673 SGHLLTAYGYGAPEF---ESGIYT---CQSDVYSFGVVMLELLTG 711
+G PEF E Y ++D++S GV+ LL+G
Sbjct: 176 -------NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 36.2 bits (82), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 89/223 (39%), Gaps = 13/223 (5%)
Query: 507 YTNSFSQENLIGAGMLGSVYRA-QLPDGKLLAVKKLD--KRASSQQKDDEFLELVNNI-D 562
+ + + +IG G V R G+ AVK +D K SS E L+ +I
Sbjct: 22 FEDVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICH 81
Query: 563 RIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAAR 622
++H +IVEL + G +++E+ L + + S
Sbjct: 82 MLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILE 141
Query: 623 ALEYLHEICQPPIVHRNFKSANIXXXXX---XAVSVSDCGLAPLISSGSVSQLSGHLLTA 679
AL Y H+ I+HR+ K N+ V + D G+A I G ++G +
Sbjct: 142 ALRYCHD---NNIIHRDVKPENVLLASKENSAPVKLGDFGVA--IQLGESGLVAGGRVGT 196
Query: 680 YGYGAPE-FESGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNR 721
+ APE + Y DV+ GV++ LL+G + T+ R
Sbjct: 197 PHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKER 239
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 36.2 bits (82), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 86/225 (38%), Gaps = 39/225 (17%)
Query: 511 FSQENL---------IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKD----DEFLE 556
F QEN+ +G+G V + + G A K + KR + + ++
Sbjct: 3 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 62
Query: 557 LVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRM 616
V+ + I+H N++ L +LI E + G L D L K +L+
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEF 118
Query: 617 ALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXA----VSVSDCGLAPLISSGSVSQL 672
+ YLH + I H + K NI + + D GLA I G+ +
Sbjct: 119 LKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK- 174
Query: 673 SGHLLTAYGYGAPEF---ESGIYT---CQSDVYSFGVVMLELLTG 711
+G PEF E Y ++D++S GV+ LL+G
Sbjct: 175 -------NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 36.2 bits (82), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 86/225 (38%), Gaps = 39/225 (17%)
Query: 511 FSQENL---------IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKD----DEFLE 556
F QEN+ +G+G V + + G A K + KR + + ++
Sbjct: 3 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 62
Query: 557 LVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRM 616
V+ + I+H N++ L +LI E + G L D L K +L+
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEF 118
Query: 617 ALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXA----VSVSDCGLAPLISSGSVSQL 672
+ YLH + I H + K NI + + D GLA I G+ +
Sbjct: 119 LKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK- 174
Query: 673 SGHLLTAYGYGAPEF---ESGIYT---CQSDVYSFGVVMLELLTG 711
+G PEF E Y ++D++S GV+ LL+G
Sbjct: 175 -------NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 36.2 bits (82), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 86/225 (38%), Gaps = 39/225 (17%)
Query: 511 FSQENL---------IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKD----DEFLE 556
F QEN+ +G+G V + + G A K + KR + + ++
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 557 LVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRM 616
V+ + I+H N++ L +LI E + G L D L K +L+
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEF 119
Query: 617 ALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXA----VSVSDCGLAPLISSGSVSQL 672
+ YLH + I H + K NI + + D GLA I G+ +
Sbjct: 120 LKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK- 175
Query: 673 SGHLLTAYGYGAPEF---ESGIYT---CQSDVYSFGVVMLELLTG 711
+G PEF E Y ++D++S GV+ LL+G
Sbjct: 176 -------NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 36.2 bits (82), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 86/225 (38%), Gaps = 39/225 (17%)
Query: 511 FSQENL---------IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKD----DEFLE 556
F QEN+ +G+G V + + G A K + KR + + ++
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 557 LVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRM 616
V+ + I+H N++ L +LI E + G L D L K +L+
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEF 119
Query: 617 ALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXA----VSVSDCGLAPLISSGSVSQL 672
+ YLH + I H + K NI + + D GLA I G+ +
Sbjct: 120 LKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK- 175
Query: 673 SGHLLTAYGYGAPEF---ESGIYT---CQSDVYSFGVVMLELLTG 711
+G PEF E Y ++D++S GV+ LL+G
Sbjct: 176 -------NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 36.2 bits (82), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 86/225 (38%), Gaps = 39/225 (17%)
Query: 511 FSQENL---------IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKD----DEFLE 556
F QEN+ +G+G V + + G A K + KR + + ++
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 557 LVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRM 616
V+ + I+H N++ L +LI E + G L D L K +L+
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEF 119
Query: 617 ALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXA----VSVSDCGLAPLISSGSVSQL 672
+ YLH + I H + K NI + + D GLA I G+ +
Sbjct: 120 LKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK- 175
Query: 673 SGHLLTAYGYGAPEF---ESGIYT---CQSDVYSFGVVMLELLTG 711
+G PEF E Y ++D++S GV+ LL+G
Sbjct: 176 -------NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 36.2 bits (82), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 61/156 (39%), Gaps = 37/156 (23%)
Query: 635 IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYG----YGAPEFES- 689
+VHR+ K NI G A LI GS + L T + Y PE+ S
Sbjct: 160 VVHRDIKDENILIDLRR-------GCAKLIDFGSGALLHDEPYTDFDGTRVYSPPEWISR 212
Query: 690 -GIYTCQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSL 748
+ + V+S G+++ +++ G ++R + E +LH
Sbjct: 213 HQYHALPATVWSLGILLYDMVCGDIPFERDQEILEA--------ELH------------- 251
Query: 749 SGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQD 784
+PA +I RC+ +P RP + E++ D
Sbjct: 252 ---FPAHVSPDCCALIRRCLAPKPSSRPSLEEILLD 284
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 35.8 bits (81), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 86/225 (38%), Gaps = 39/225 (17%)
Query: 511 FSQENL---------IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKD----DEFLE 556
F QEN+ +G+G V + + G A K + KR + + ++
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 557 LVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRM 616
V+ + I+H N++ L +LI E + G L D L K +L+
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEF 119
Query: 617 ALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXA----VSVSDCGLAPLISSGSVSQL 672
+ YLH + I H + K NI + + D GLA I G+ +
Sbjct: 120 LKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK- 175
Query: 673 SGHLLTAYGYGAPEF---ESGIYT---CQSDVYSFGVVMLELLTG 711
+G PEF E Y ++D++S GV+ LL+G
Sbjct: 176 -------NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 35.8 bits (81), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 86/225 (38%), Gaps = 39/225 (17%)
Query: 511 FSQENL---------IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKD----DEFLE 556
F QEN+ +G+G V + + G A K + KR + + ++
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 557 LVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRM 616
V+ + I+H N++ L +LI E + G L D L K +L+
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEF 119
Query: 617 ALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXA----VSVSDCGLAPLISSGSVSQL 672
+ YLH + I H + K NI + + D GLA I G+ +
Sbjct: 120 LKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK- 175
Query: 673 SGHLLTAYGYGAPEF---ESGIYT---CQSDVYSFGVVMLELLTG 711
+G PEF E Y ++D++S GV+ LL+G
Sbjct: 176 -------NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 35.8 bits (81), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 86/225 (38%), Gaps = 39/225 (17%)
Query: 511 FSQENL---------IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKD----DEFLE 556
F QEN+ +G+G V + + G A K + KR + + ++
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 557 LVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRM 616
V+ + I+H N++ L +LI E + G L D L K +L+
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEF 119
Query: 617 ALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXA----VSVSDCGLAPLISSGSVSQL 672
+ YLH + I H + K NI + + D GLA I G+ +
Sbjct: 120 LKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK- 175
Query: 673 SGHLLTAYGYGAPEF---ESGIYT---CQSDVYSFGVVMLELLTG 711
+G PEF E Y ++D++S GV+ LL+G
Sbjct: 176 -------NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 35.8 bits (81), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 111/297 (37%), Gaps = 53/297 (17%)
Query: 511 FSQENL---------IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKD----DEFLE 556
F QEN+ +G+G V + + G A K + KR + + ++
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 557 LVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRM 616
V+ + I+H N++ L +LI E + G L D L K +L+
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEF 119
Query: 617 ALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXA----VSVSDCGLAPLISSGSVSQL 672
+ YLH + I H + K NI + + D GLA I G+ +
Sbjct: 120 LKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176
Query: 673 SGHLLTAYGYGAPEF---ESGIYT---CQSDVYSFGVVMLELLTGRKSYDRTRNRGEQFL 726
+G PEF E Y ++D++S GV+ LL+G FL
Sbjct: 177 I--------FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG----------ASPFL 218
Query: 727 VRWAIPQLHDIDALSRMVDPSLSGQYPAKSLSHFADIISRCVQSEPEFRPPMSEVVQ 783
L ++ A V+ +Y + + + D I R + +P+ R + + +Q
Sbjct: 219 GDTKQETLANVSA----VNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 35.8 bits (81), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 86/225 (38%), Gaps = 39/225 (17%)
Query: 511 FSQENL---------IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKD----DEFLE 556
F QEN+ +G+G V + + G A K + KR + + ++
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 557 LVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRM 616
V+ + I+H N++ L +LI E + G L D L K +L+
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEF 119
Query: 617 ALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXA----VSVSDCGLAPLISSGSVSQL 672
+ YLH + I H + K NI + + D GLA I G+ +
Sbjct: 120 LKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK- 175
Query: 673 SGHLLTAYGYGAPEF---ESGIYT---CQSDVYSFGVVMLELLTG 711
+G PEF E Y ++D++S GV+ LL+G
Sbjct: 176 -------NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 35.8 bits (81), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 87/208 (41%), Gaps = 24/208 (11%)
Query: 517 IGAGMLG--SVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKG 574
IG+G G + R +L +L+AVK +++ A+ + E++N+ +RH NIV K
Sbjct: 28 IGSGNFGVARLMRDKL-TKELVAVKYIERGAAIDENVQR--EIINH-RSLRHPNIVRFKE 83
Query: 575 YCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPP 634
+I EY S G L + + + + + ++ G + Y H +
Sbjct: 84 VILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVS----YCHSM---Q 136
Query: 635 IVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAP------EFE 688
I HR+ K N A + C SS SQ + T Y AP E++
Sbjct: 137 ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTP-AYIAPEVLLRQEYD 195
Query: 689 SGIYTCQSDVYSFGVVMLELLTGRKSYD 716
I +DV+S GV + +L G ++
Sbjct: 196 GKI----ADVWSCGVTLYVMLVGAYPFE 219
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 35.8 bits (81), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 87/222 (39%), Gaps = 33/222 (14%)
Query: 511 FSQENL---------IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKD----DEFLE 556
F QEN+ +G+G V + + G A K + KR + + ++
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 557 LVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRM 616
V+ + I+H N++ L +LI E + G L D L K +L+
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEF 119
Query: 617 ALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXA----VSVSDCGLAPLISSGSVSQL 672
+ YLH + I H + K NI + + D GLA I G+ +
Sbjct: 120 LKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK- 175
Query: 673 SGHLLTAYGYGAPEFESGIYT---CQSDVYSFGVVMLELLTG 711
++ + APE + Y ++D++S GV+ LL+G
Sbjct: 176 --NIFGTPAFVAPEIVN--YEPLGLEADMWSIGVITYILLSG 213
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 84/216 (38%), Gaps = 30/216 (13%)
Query: 515 NLIGAGMLGSVYRAQLPD-GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELK 573
+++G G +V+R + G L A+K + + + D + E + ++ H NIV+L
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREF-EVLKKLNHKNIVKLF 73
Query: 574 GYCAEHGQR--LLIYEYCSNGTLQDMLHSDDELKN--NLSWNTRIRMALGAARALEYLHE 629
E R +LI E+C G+L +L + +R +G L
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---- 129
Query: 630 ICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSG--HLLTAYG---YGA 684
+ IVHRN K NI + + L G+ +L ++ YG Y
Sbjct: 130 --ENGIVHRNIKPGNI----MRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLH 183
Query: 685 PE-FESGI--------YTCQSDVYSFGVVMLELLTG 711
P+ +E + Y D++S GV TG
Sbjct: 184 PDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 92/240 (38%), Gaps = 32/240 (13%)
Query: 534 KLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGT 593
+L+AVK +++ ++ D+ + N +RH NIV K ++ EY S G
Sbjct: 45 ELVAVKYIER---GEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGE 101
Query: 594 LQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAV 653
L + + + + + ++ G + Y H + + HR+ K N A
Sbjct: 102 LFERICNAGRFSEDEARFFFQQLISGVS----YCHAM---QVCHRDLKLENTLLDGSPAP 154
Query: 654 SVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE--FESGIYTCQSDVYSFGVVMLELLTG 711
+ C SS SQ + T Y APE + +DV+S GV + +L G
Sbjct: 155 RLKICAFGYSKSSVLHSQPKSTVGTP-AYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
Query: 712 -------------RKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSLSGQYPAKSLS 758
RK+ R N V++AIP I R + + PAK +S
Sbjct: 214 AYPFEDPEEPKNFRKTIHRILN------VQYAIPDYVHISPECRHLISRIFVADPAKRIS 267
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 82/214 (38%), Gaps = 26/214 (12%)
Query: 515 NLIGAGMLGSVYRAQLPD-GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELK 573
+++G G +V+R + G L A+K + + + D + E + ++ H NIV+L
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREF-EVLKKLNHKNIVKLF 73
Query: 574 GYCAEHGQR--LLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEIC 631
E R +LI E+C G+L +L E +N + + ++ +
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVL----EEPSNAYGLPESEFLIVLRDVVGGMNHLR 129
Query: 632 QPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE----- 686
+ IVHRN K NI + + L G+ +L YG E
Sbjct: 130 ENGIVHRNIKPGNI----MRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPD 185
Query: 687 -FESGI--------YTCQSDVYSFGVVMLELLTG 711
+E + Y D++S GV TG
Sbjct: 186 MYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 92/240 (38%), Gaps = 32/240 (13%)
Query: 534 KLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGT 593
+L+AVK +++ ++ D+ + N +RH NIV K ++ EY S G
Sbjct: 45 ELVAVKYIER---GEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGE 101
Query: 594 LQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAV 653
L + + + + + ++ G + Y H + + HR+ K N A
Sbjct: 102 LFERICNAGRFSEDEARFFFQQLISGVS----YCHAM---QVCHRDLKLENTLLDGSPAP 154
Query: 654 SVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE--FESGIYTCQSDVYSFGVVMLELLTG 711
+ C SS SQ + T Y APE + +DV+S GV + +L G
Sbjct: 155 RLKICAFGYSKSSVLHSQPKDTVGTP-AYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
Query: 712 -------------RKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSLSGQYPAKSLS 758
RK+ R N V++AIP I R + + PAK +S
Sbjct: 214 AYPFEDPEEPKNFRKTIHRILN------VQYAIPDYVHISPECRHLISRIFVADPAKRIS 267
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 86/225 (38%), Gaps = 39/225 (17%)
Query: 511 FSQENL---------IGAGMLGSVYRA-QLPDGKLLAVKKLDKRASSQQKD----DEFLE 556
F QEN+ +G+G V + + G A K + KR + + ++
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 557 LVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRM 616
V+ + I+H N++ L +LI E + G L D L K +L+
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAE----KESLTEEEATEF 119
Query: 617 ALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXA----VSVSDCGLAPLISSGSVSQL 672
+ YLH + I H + K NI + + D GLA I G+ +
Sbjct: 120 LKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK- 175
Query: 673 SGHLLTAYGYGAPEF---ESGIYT---CQSDVYSFGVVMLELLTG 711
+G PEF E Y ++D++S GV+ LL+G
Sbjct: 176 -------NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 92/240 (38%), Gaps = 32/240 (13%)
Query: 534 KLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGT 593
+L+AVK +++ ++ D+ + N +RH NIV K ++ EY S G
Sbjct: 44 ELVAVKYIER---GEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGE 100
Query: 594 LQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAV 653
L + + + + + ++ G + Y H + + HR+ K N A
Sbjct: 101 LFERICNAGRFSEDEARFFFQQLISGVS----YCHAM---QVCHRDLKLENTLLDGSPAP 153
Query: 654 SVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE--FESGIYTCQSDVYSFGVVMLELLTG 711
+ C SS SQ + T Y APE + +DV+S GV + +L G
Sbjct: 154 RLKICDFGYSKSSVLHSQPKSTVGTP-AYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 212
Query: 712 -------------RKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSLSGQYPAKSLS 758
RK+ R N V++AIP I R + + PAK +S
Sbjct: 213 AYPFEDPEEPKNFRKTIHRILN------VQYAIPDYVHISPECRHLISRIFVADPAKRIS 266
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 106/271 (39%), Gaps = 59/271 (21%)
Query: 517 IGAGMLGSVYRAQLPDGK----LLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVEL 572
IGAG G A+L K L+AVK +++ ++ D+ + N +RH NIV
Sbjct: 27 IGAGNFGV---ARLMRDKQANELVAVKYIER---GEKIDENVKREIINHRSLRHPNIVRF 80
Query: 573 KGYCAEHGQRLLIYEYCSNGTLQDML-----HSDDELKNNLSWNTRIRMALGAARALEYL 627
K ++ EY S G L + + S+DE + + ++ + A A++
Sbjct: 81 KEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEAR---FFFQQLISGVSYAHAMQ-- 135
Query: 628 HEICQPPIVHRNFKSANIXXXXXXA--VSVSDCGLAPLISSGSVSQLSGHLLTAYG---Y 682
+ HR+ K N A + ++D G + S L +A G Y
Sbjct: 136 -------VAHRDLKLENTLLDGSPAPRLKIADFGYS------KASVLHSQPKSAVGTPAY 182
Query: 683 GAPE--FESGIYTCQSDVYSFGVVMLELLTG-------------RKSYDRTRNRGEQFLV 727
APE + +DV+S GV + +L G RK+ R N V
Sbjct: 183 IAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILN------V 236
Query: 728 RWAIPQLHDIDALSRMVDPSLSGQYPAKSLS 758
++AIP I R + + PAK +S
Sbjct: 237 QYAIPDYVHISPECRHLISRIFVADPAKRIS 267
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 84/207 (40%), Gaps = 17/207 (8%)
Query: 516 LIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNN--IDRIRHANIVELK 573
++G G G V A + L K+ K+ Q DD +V + + +
Sbjct: 26 VLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQL 85
Query: 574 GYCAEHGQRL-LIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQ 632
C + RL + EY + G L + + K + +++G L +LH +
Sbjct: 86 HSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIG----LFFLH---K 138
Query: 633 PPIVHRNFKSANIXXXXXXAVSVSDCGLAP--LISSGSVSQLSGHLLTAYGYGAPEFES- 689
I++R+ K N+ + ++D G+ ++ + + G Y APE +
Sbjct: 139 RGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCG----TPDYIAPEIIAY 194
Query: 690 GIYTCQSDVYSFGVVMLELLTGRKSYD 716
Y D +++GV++ E+L G+ +D
Sbjct: 195 QPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|2V9T|B Chain B, Complex Between The Second Lrr Domain Of Slit2 And The
First Ig Domain From Robo1
Length = 220
Score = 33.1 bits (74), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 27/57 (47%)
Query: 119 IPSILPVTMQNFFLSDNQFSGSIPSSLATLTLLTDMSLNNNLLSGEIPDAFQSLTGL 175
IP+ LP T+ L N P + + L + L+NN +S PDAFQ L L
Sbjct: 26 IPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSL 82
>pdb|2V9S|A Chain A, Second Lrr Domain Of Human Slit2
pdb|2V9S|B Chain B, Second Lrr Domain Of Human Slit2
pdb|2V9S|C Chain C, Second Lrr Domain Of Human Slit2
pdb|2V9S|D Chain D, Second Lrr Domain Of Human Slit2
Length = 220
Score = 33.1 bits (74), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 27/57 (47%)
Query: 119 IPSILPVTMQNFFLSDNQFSGSIPSSLATLTLLTDMSLNNNLLSGEIPDAFQSLTGL 175
IP+ LP T+ L N P + + L + L+NN +S PDAFQ L L
Sbjct: 26 IPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSL 82
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 33.1 bits (74), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 88/219 (40%), Gaps = 18/219 (8%)
Query: 501 IASLQQYTNSFSQENLIGAGMLGSVYRAQLPDG-KLLAVKKLDKRASSQQKDDEFLELVN 559
I L+ + +IG G G V + K+ A+K L K ++ D F
Sbjct: 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 120
Query: 560 NIDRIRHANIVELKGYCAEHGQRL-LIYEYCSNGTLQDMLHSDDELKNNLSWNT-RIRMA 617
+I ++ V Y + + L ++ EY G L +++ + D + + T + +A
Sbjct: 121 DIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLA 180
Query: 618 LGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLL 677
L A ++ + +HR+ K N+ + ++D G ++ + + +
Sbjct: 181 LDAIHSMGF---------IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVG 231
Query: 678 TAYGYGAPEF-----ESGIYTCQSDVYSFGVVMLELLTG 711
T Y +PE G Y + D +S GV + E+L G
Sbjct: 232 TP-DYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 88/219 (40%), Gaps = 18/219 (8%)
Query: 501 IASLQQYTNSFSQENLIGAGMLGSVYRAQLPDG-KLLAVKKLDKRASSQQKDDEFLELVN 559
I L+ + +IG G G V + K+ A+K L K ++ D F
Sbjct: 66 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 125
Query: 560 NIDRIRHANIVELKGYCAEHGQRL-LIYEYCSNGTLQDMLHSDDELKNNLSWNT-RIRMA 617
+I ++ V Y + + L ++ EY G L +++ + D + + T + +A
Sbjct: 126 DIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLA 185
Query: 618 LGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLL 677
L A ++ + +HR+ K N+ + ++D G ++ + + +
Sbjct: 186 LDAIHSMGF---------IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVG 236
Query: 678 TAYGYGAPEF-----ESGIYTCQSDVYSFGVVMLELLTG 711
T Y +PE G Y + D +S GV + E+L G
Sbjct: 237 TP-DYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 32.7 bits (73), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 88/219 (40%), Gaps = 18/219 (8%)
Query: 501 IASLQQYTNSFSQENLIGAGMLGSVYRAQLPDG-KLLAVKKLDKRASSQQKDDEFLELVN 559
I L+ + +IG G G V + K+ A+K L K ++ D F
Sbjct: 66 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 125
Query: 560 NIDRIRHANIVELKGYCAEHGQRL-LIYEYCSNGTLQDMLHSDDELKNNLSWNT-RIRMA 617
+I ++ V Y + + L ++ EY G L +++ + D + + T + +A
Sbjct: 126 DIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLA 185
Query: 618 LGAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLL 677
L A ++ + +HR+ K N+ + ++D G ++ + + +
Sbjct: 186 LDAIHSMGF---------IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVG 236
Query: 678 TAYGYGAPEF-----ESGIYTCQSDVYSFGVVMLELLTG 711
T Y +PE G Y + D +S GV + E+L G
Sbjct: 237 TP-DYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 32.7 bits (73), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 96/246 (39%), Gaps = 52/246 (21%)
Query: 506 QYTNSFSQENLIGAGMLGSVY--RAQLPDG--KLLAVKKLDKRASSQQKDDEF--LELVN 559
Q +N F E+ IG G SVY AQL G + +A+K L + + E L +
Sbjct: 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVAG 77
Query: 560 NIDRIRHANIVELKGYCAEHGQRLLI-YEYCSNGTLQDMLHSDDELKNNLSWNTRIRMAL 618
D N++ +K YC ++I Y + + D+L N+LS+ L
Sbjct: 78 GQD-----NVMGVK-YCFRKNDHVVIAMPYLEHESFLDIL-------NSLSFQEVREYML 124
Query: 619 GAARALEYLHEICQPPIVHRNFKSAN-IXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLL 677
+AL+ +H+ IVHR+ K +N + ++ D GLA + L
Sbjct: 125 NLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQS 181
Query: 678 TAY--------------------------GYGAPEFESGI--YTCQSDVYSFGVVMLELL 709
A G+ APE + T D++S GV+ L LL
Sbjct: 182 EAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLL 241
Query: 710 TGRKSY 715
+GR +
Sbjct: 242 SGRYPF 247
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 96/243 (39%), Gaps = 38/243 (15%)
Query: 534 KLLAVKKLD---KRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCS 590
+L+AVK ++ K A++ ++ E++N+ +RH NIV K ++ EY S
Sbjct: 45 ELVAVKYIERGEKIAANVKR-----EIINH-RSLRHPNIVRFKEVILTPTHLAIVMEYAS 98
Query: 591 NGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANIXXXXX 650
G L + + + + + ++ G + Y H + + HR+ K N
Sbjct: 99 GGELFERICNAGRFSEDEARFFFQQLISGVS----YCHAM---QVCHRDLKLENTLLDGS 151
Query: 651 XAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPE--FESGIYTCQSDVYSFGVVMLEL 708
A + C SS SQ + T Y APE + +DV+S GV + +
Sbjct: 152 PAPRLKICDFGYSKSSVLHSQPKSTVGTP-AYIAPEVLLKKEYDGKVADVWSCGVTLYVM 210
Query: 709 LTG-------------RKSYDRTRNRGEQFLVRWAIPQLHDIDALSRMVDPSLSGQYPAK 755
L G RK+ R N V++AIP I R + + PAK
Sbjct: 211 LVGAYPFEDPEEPKNFRKTIHRILN------VQYAIPDYVHISPECRHLISRIFVADPAK 264
Query: 756 SLS 758
+S
Sbjct: 265 RIS 267
>pdb|3E6J|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor (Vlr)
Rbc36 In Complex With H-Trisaccharide
Length = 229
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 28/59 (47%)
Query: 117 GSIPSILPVTMQNFFLSDNQFSGSIPSSLATLTLLTDMSLNNNLLSGEIPDAFQSLTGL 175
S+P+ +P Q +L DNQ + P +L L ++ L +N L F SLT L
Sbjct: 32 ASVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQL 90
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 14/88 (15%)
Query: 623 ALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLISSGSVSQLS--GHLLTAY 680
AL YLH I +V+ + K NI LI G+VS+++ G+L
Sbjct: 194 ALSYLHSIG---LVYNDLKPENIMLTEEQL---------KLIDLGAVSRINSFGYLYGTP 241
Query: 681 GYGAPEFESGIYTCQSDVYSFGVVMLEL 708
G+ APE T +D+Y+ G + L
Sbjct: 242 GFQAPEIVRTGPTVATDIYTVGRTLAAL 269
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 84/219 (38%), Gaps = 30/219 (13%)
Query: 506 QYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQ----KDDEFLELVNNI 561
+Y+ +S + +G+G G V+ A + V K K+ + +D + ++ I
Sbjct: 21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEI 80
Query: 562 ---DRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMAL 618
R+ HANI+++ G L+ E +G L D + + + I L
Sbjct: 81 AILSRVEHANIIKVLDIFENQGFFQLVMEKHGSG-LDLFAFIDRHPRLDEPLASYIFRQL 139
Query: 619 GAARALEYLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLAPLIS--------SGSVS 670
+A L + I+HR+ K NI + + D G A + G++
Sbjct: 140 VSAVGYLRLKD-----IIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTIE 194
Query: 671 QLSGHLLTAYGYGAPEFESGIYTCQSDVYSFGVVMLELL 709
+ +L Y PE E ++S GV + L+
Sbjct: 195 YCAPEVLMGNPYRGPELE---------MWSLGVTLYTLV 224
>pdb|3A79|B Chain B, Crystal Structure Of Tlr2-Tlr6-Pam2csk4 Complex
Length = 562
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 104 SIRVIDLSNNHIGGSIPSILPVTMQNFFLSDNQFSGSIPSSLATLTLLTDMSLNNNLLSG 163
SI V++LS+N + GS+ LP ++ L +N+ SIP + L L ++++ +N L
Sbjct: 429 SILVLNLSSNMLTGSVFRCLPPKVKVLDLHNNRI-MSIPKDVTHLQALQELNVASNQLKS 487
Query: 164 EIPD-AFQSLTGL 175
+PD F LT L
Sbjct: 488 -VPDGVFDRLTSL 499
>pdb|3TWI|D Chain D, Variable Lymphocyte Receptor Recognition Of The
Immunodominant Glycoprotein Of Bacillus Anthracis Spores
pdb|3TWI|E Chain E, Variable Lymphocyte Receptor Recognition Of The
Immunodominant Glycoprotein Of Bacillus Anthracis Spores
pdb|3TWI|F Chain F, Variable Lymphocyte Receptor Recognition Of The
Immunodominant Glycoprotein Of Bacillus Anthracis Spores
Length = 179
Score = 31.2 bits (69), Expect = 2.3, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 28/59 (47%)
Query: 117 GSIPSILPVTMQNFFLSDNQFSGSIPSSLATLTLLTDMSLNNNLLSGEIPDAFQSLTGL 175
S+P+ +P T Q L NQ + P +LT LT ++L N L+ F LT L
Sbjct: 32 ASVPAGIPTTTQVLHLYINQITKLEPGVFDSLTQLTYLNLAVNQLTALPVGVFDKLTKL 90
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 85/221 (38%), Gaps = 9/221 (4%)
Query: 507 YTNSFSQENLIGAGMLGSVYRA-QLPDGKLLAVKKLD--KRASSQQKDDEFLELVNNI-D 562
+ + + +IG G V R G+ AVK +D K SS E L+ +I
Sbjct: 22 FEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICH 81
Query: 563 RIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAAR 622
++H +IVEL + G +++E+ L + + S
Sbjct: 82 MLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILE 141
Query: 623 ALEYLHEICQPPIVHRNFK-SANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYG 681
AL Y H+ I+HR+ K + + V G I G ++G +
Sbjct: 142 ALRYCHD---NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPH 198
Query: 682 YGAPE-FESGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNR 721
+ APE + Y DV+ GV++ LL+G + T+ R
Sbjct: 199 FMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKER 239
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 85/221 (38%), Gaps = 9/221 (4%)
Query: 507 YTNSFSQENLIGAGMLGSVYRA-QLPDGKLLAVKKLD--KRASSQQKDDEFLELVNNI-D 562
+ + + +IG G V R G+ AVK +D K SS E L+ +I
Sbjct: 24 FEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICH 83
Query: 563 RIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAAR 622
++H +IVEL + G +++E+ L + + S
Sbjct: 84 MLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILE 143
Query: 623 ALEYLHEICQPPIVHRNFK-SANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYG 681
AL Y H+ I+HR+ K + + V G I G ++G +
Sbjct: 144 ALRYCHD---NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPH 200
Query: 682 YGAPE-FESGIYTCQSDVYSFGVVMLELLTGRKSYDRTRNR 721
+ APE + Y DV+ GV++ LL+G + T+ R
Sbjct: 201 FMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKER 241
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 44/221 (19%), Positives = 84/221 (38%), Gaps = 34/221 (15%)
Query: 515 NLIGAGMLGSVYRA--QLPDGKLLAVK---KLDKRASSQQKDDEFLELVNNIDRIRHANI 569
+ +G G G V G+ +AVK +D+ + + + + LE +N D
Sbjct: 20 DTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRC 79
Query: 570 VELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRI----RMALGAARALE 625
V++ + HG +++E T D +K N R+ +MA +++
Sbjct: 80 VQMLEWFEHHGHICIVFELLGLSTY-------DFIKENGFLPFRLDHIRKMAYQICKSVN 132
Query: 626 YLHEICQPPIVHRNFKSANIXXXXXXAVSVSDCGLA-----------PLISSGSVSQLSG 674
+LH + H + K NI + + ++ GS +
Sbjct: 133 FLH---SNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDE 189
Query: 675 H---LLTAYGYGAPEFESGI-YTCQSDVYSFGVVMLELLTG 711
H L++ Y APE + ++ DV+S G +++E G
Sbjct: 190 HHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLG 230
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 30.4 bits (67), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 38/94 (40%), Gaps = 7/94 (7%)
Query: 641 KSANIXXXXXXAVSVSDCGLAPLISSGSVSQLSGHLLTAYGYGAPEFESGI-YTCQSDVY 699
K I + + D G A S G ++ Y APE + + SD++
Sbjct: 189 KKIQIYRTKSTGIKLIDFGCATF-----KSDYHGSIINTRQYRAPEVILNLGWDVSSDMW 243
Query: 700 SFGVVMLELLTGRKSYDRTRNRGEQFLVRWAIPQ 733
SFG V+ EL TG + RT E + +I Q
Sbjct: 244 SFGCVLAELYTGSLLF-RTHEHMEHLAMMESIIQ 276
>pdb|2R9U|A Chain A, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|B Chain B, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|C Chain C, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|D Chain D, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
Length = 174
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 27/59 (45%)
Query: 117 GSIPSILPVTMQNFFLSDNQFSGSIPSSLATLTLLTDMSLNNNLLSGEIPDAFQSLTGL 175
S+P+ +P Q +L++NQ + P L L + N+N L+ F LT L
Sbjct: 25 ASVPAGIPTDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQL 83
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.134 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,195,114
Number of Sequences: 62578
Number of extensions: 678806
Number of successful extensions: 3492
Number of sequences better than 100.0: 909
Number of HSP's better than 100.0 without gapping: 292
Number of HSP's successfully gapped in prelim test: 617
Number of HSP's that attempted gapping in prelim test: 2098
Number of HSP's gapped (non-prelim): 1032
length of query: 801
length of database: 14,973,337
effective HSP length: 107
effective length of query: 694
effective length of database: 8,277,491
effective search space: 5744578754
effective search space used: 5744578754
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)