Query 003708
Match_columns 801
No_of_seqs 316 out of 1532
Neff 6.0
Searched_HMMs 29240
Date Tue Mar 26 18:52:52 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/003708.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1755-1759//hhsearch_pdb/003708hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1a58_A Cyclophilin; isomerase, 1.0 1 1 353.7 23.3 176 1-176 1-177 (177)
2 2he9_A NK-tumor recognition pr 1.0 1 1 353.2 23.4 177 1-177 14-191 (192)
3 2wfi_A Peptidyl-prolyl CIS-tra 1.0 1 1 352.0 23.5 175 1-175 3-179 (179)
4 1ihg_A Cyclophilin 40; ppiase 1.0 1 1 349.2 24.5 176 5-180 14-189 (370)
5 1z81_A Cyclophilin; structural 1.0 1 1 343.8 20.2 172 1-175 54-229 (229)
6 2poy_A Peptidyl-prolyl CIS-tra 1.0 1 1 343.2 21.9 172 2-174 15-186 (186)
7 2igv_A Peptidyl-prolyl CIS-tra 1.0 1 1 342.0 22.4 171 5-176 2-172 (173)
8 1mzw_A Cyclophilin H, U-snRNP- 1.0 1 1 338.1 20.2 171 2-175 6-177 (177)
9 1qng_A Peptidyl-prolyl CIS-tra 1.0 1 1 336.9 20.9 169 5-175 2-170 (170)
10 3rdd_A Peptidyl-prolyl CIS-tra 1.0 1 1 331.8 21.7 165 4-176 20-184 (184)
No 1
>1a58_A Cyclophilin; isomerase, ppiase; 1.95A {Brugia malayi} SCOP: b.62.1.1 PDB: 1a33_A 1c5f_A*
Probab=1.00 E-value=1 Score=353.69 Aligned_cols=176 Identities=52% Similarity=0.831 Sum_probs=168.7
Q ss_pred CCCCCCCEEEEEEEECCCEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEECCCCC
Q ss_conf 98889848999997589044559999769987599999999860688999999988544697489964296122077768
Q 003708 1 MAKKKSLLVFMDVSIDGDPVERMVFELFSDIAPKTAENFRALCTGEKGIGPRTGKPLHYKGSFFHRVIKGSMAEGGDFVK 80 (801)
Q Consensus 1 m~~~~np~v~ldtsig~~~~GRIvIeLf~d~aP~t~~nFl~lc~G~~g~g~~t~k~~~Y~Gt~f~RI~kg~~iqgGd~~~ 80 (801)
|.++.||+||||+++++.++|+|+||||.++||+||+||++||++++|++..+++++||+|+.||||+++||||+||++.
T Consensus 1 ~~~~~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~~~~g~~~~Y~g~~FhRvi~~f~iQgGd~~~ 80 (177)
T 1a58_A 1 MSKKDRRRVFLDVTIDGNLAGRIVMELYNDIAPRTCNNFLMLCTGMAGTGKISGKPLHYKGSTFHRVIKNFMIQGGDFTK 80 (177)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBCCCTTCBEEEEETTTEEEECCCSS
T ss_pred CCCCCCCEEEEEEEECCEECEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCCEEEEEECCCEEEECCCCC
T ss_conf 99888968999998899804069999837889668999999735886766456875425798989978997897078668
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEECHHHHHHHHHC-CCC
Q ss_conf 9999987446888889998988898907974016999866438997158988799983799999198999999831-899
Q 003708 81 RDGTSGESIYEGKFPDESPRLKHDRPGLLSMSIADRDTLGSQFIITFKANHSLDRKYVVFGELVQGHEILKKIENV-GDE 159 (801)
Q Consensus 81 ~~g~~g~si~g~~f~dE~~~l~h~~~G~Vsma~~gp~~ngSqFfItL~~~~~LDgk~tVFGkVV~G~eVLekIe~~-~d~ 159 (801)
++|.++++||+..|.+|++.++|+.+|+|+||+.++++|++||||||.++++||++|+|||+||+||+||++|+.+ ++.
T Consensus 81 ~~g~gg~si~g~~f~dE~~~~~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv~G~dvv~~I~~~~~~~ 160 (177)
T 1a58_A 81 GDGTGGESIYGGMFDDEEFVMKHDEPFVVSMANKGPNTNGSQFFITTTPAPHLNNIHVVFGKVVSGQEVVTKIEYLKTNS 160 (177)
T ss_dssp SSSSCCCCTTSSCBCCCCCCSCCCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCT
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCCEEEEEEEECCHHHHHHHHHCCCCC
T ss_conf 88989875568842575457666888189986689997104899977999766899779999976889999998378798
Q ss_pred CCCCCCCEEEEEEEECC
Q ss_conf 99811237999746504
Q 003708 160 EGRLTVTVKIINCGEVS 176 (801)
Q Consensus 160 ~g~P~~~v~I~~~gvl~ 176 (801)
+++|..+|+|.+||+|.
T Consensus 161 ~~~P~~~v~I~~~G~l~ 177 (177)
T 1a58_A 161 KNRPLADVVILNCGELV 177 (177)
T ss_dssp TSCBSSCEEEEEEEEEC
T ss_pred CCCCCCCEEEEEEEEEC
T ss_conf 99697886999757889
No 2
>2he9_A NK-tumor recognition protein; cyclosporin, isomerase, membrane, repeat, rotamase, peptidylprolyl isomerase, structural genomics; 2.00A {Homo sapiens}
Probab=1.00 E-value=1 Score=353.17 Aligned_cols=177 Identities=49% Similarity=0.806 Sum_probs=169.9
Q ss_pred CCCCCCCEEEEEEEECCCEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEECCCCC
Q ss_conf 98889848999997589044559999769987599999999860688999999988544697489964296122077768
Q 003708 1 MAKKKSLLVFMDVSIDGDPVERMVFELFSDIAPKTAENFRALCTGEKGIGPRTGKPLHYKGSFFHRVIKGSMAEGGDFVK 80 (801)
Q Consensus 1 m~~~~np~v~ldtsig~~~~GRIvIeLf~d~aP~t~~nFl~lc~G~~g~g~~t~k~~~Y~Gt~f~RI~kg~~iqgGd~~~ 80 (801)
|.+..+|+||||+++++.++|+|+||||+++||+||+||++||+|++|++..+++.+||+|+.||||+++||||+||++.
T Consensus 14 ~~~~~~~~vf~di~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~k~~~Y~g~~FhRVi~~fmiQgGd~~~ 93 (192)
T 2he9_A 14 LVPRGSPQCHFDIEINREPVGRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGKKLCYKGSTFHRVVKNFMIQGGDFSE 93 (192)
T ss_dssp -----CCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETTTEEEECCTTT
T ss_pred CCCCCCCEEEEEEEECCEECCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCCEEEEEECCCEEECCCCCC
T ss_conf 53457985999999898725259999848889568999999844877766554547718898999997897898586557
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEECHHHHHHHHHC-CCC
Q ss_conf 9999987446888889998988898907974016999866438997158988799983799999198999999831-899
Q 003708 81 RDGTSGESIYEGKFPDESPRLKHDRPGLLSMSIADRDTLGSQFIITFKANHSLDRKYVVFGELVQGHEILKKIENV-GDE 159 (801)
Q Consensus 81 ~~g~~g~si~g~~f~dE~~~l~h~~~G~Vsma~~gp~~ngSqFfItL~~~~~LDgk~tVFGkVV~G~eVLekIe~~-~d~ 159 (801)
++|.++++||+..|.+|++.|+|+.+|+|+||+.++++|++||||||.++++||++|+|||+||+||+||++|+.+ ++.
T Consensus 94 ~~G~gg~siyg~~f~dE~~~l~h~~~G~lsMAn~gp~tngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~ 173 (192)
T 2he9_A 94 GNGKGGESIYGGYFKDENFILKHDRAFLLSMANRGKHTNGSQFFITTKPAPHLDGVHVVFGLVISGFEVIEQIENLKTDA 173 (192)
T ss_dssp SSSSCCCCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCT
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCEEEEEEECHHHHHHHHCCCCCC
T ss_conf 88888876468832674246777997189997689998322799986898645897018999983799999987178698
Q ss_pred CCCCCCCEEEEEEEECCC
Q ss_conf 998112379997465045
Q 003708 160 EGRLTVTVKIINCGEVSE 177 (801)
Q Consensus 160 ~g~P~~~v~I~~~gvl~e 177 (801)
+++|..+|+|.+|++|..
T Consensus 174 ~~~P~~~v~I~~~g~l~~ 191 (192)
T 2he9_A 174 ASRPYADVRVIDCGVLAT 191 (192)
T ss_dssp TSCBSSCEEEEEEEECC-
T ss_pred CCCCCCCEEEEEEEEECC
T ss_conf 997868869997579836
No 3
>2wfi_A Peptidyl-prolyl CIS-trans isomerase G; phosphoprotein, PRE-mRNA splicing, alternative splicing, nucleus, rotamase, cyclosporin; HET: OCS; 0.75A {Homo sapiens} PDB: 2wfj_A* 2gw2_A
Probab=1.00 E-value=1 Score=351.98 Aligned_cols=175 Identities=51% Similarity=0.858 Sum_probs=168.1
Q ss_pred CCCC-CCCEEEEEEEECCCEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEECCCC
Q ss_conf 9888-984899999758904455999976998759999999986068899999998854469748996429612207776
Q 003708 1 MAKK-KSLLVFMDVSIDGDPVERMVFELFSDIAPKTAENFRALCTGEKGIGPRTGKPLHYKGSFFHRVIKGSMAEGGDFV 79 (801)
Q Consensus 1 m~~~-~np~v~ldtsig~~~~GRIvIeLf~d~aP~t~~nFl~lc~G~~g~g~~t~k~~~Y~Gt~f~RI~kg~~iqgGd~~ 79 (801)
|.++ .||+||||+++++.++|+|+||||.++||+||+||++||+|++|++..+++.+||+|+.||||+++||||+||++
T Consensus 3 ~~~~~~~~~vf~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~~Y~g~~FhRvi~~f~iQgGd~~ 82 (179)
T 2wfi_A 3 MGIKVQRPRCFFDIAINNQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVKDFMVQGGDFS 82 (179)
T ss_dssp -----CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETTTEEEECCTT
T ss_pred CCCCCCCCEEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCCEEEEEECCCEEECCCCC
T ss_conf 77678898699999989863317999985788976999999985577676655464772889899998889788716534
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEECHHHHHHHHHC-CC
Q ss_conf 89999987446888889998988898907974016999866438997158988799983799999198999999831-89
Q 003708 80 KRDGTSGESIYEGKFPDESPRLKHDRPGLLSMSIADRDTLGSQFIITFKANHSLDRKYVVFGELVQGHEILKKIENV-GD 158 (801)
Q Consensus 80 ~~~g~~g~si~g~~f~dE~~~l~h~~~G~Vsma~~gp~~ngSqFfItL~~~~~LDgk~tVFGkVV~G~eVLekIe~~-~d 158 (801)
.++|.++++||+..|++|++.++|+.+|+|+||+.++++|++||||||.++++||++|+|||+||+||+||++|+.+ ++
T Consensus 83 ~~~g~gg~si~g~~f~dE~~~~~h~~~G~lsMAn~gp~tngSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~t~ 162 (179)
T 2wfi_A 83 EGNGRGGESIYGGFFEDESFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIENQKTD 162 (179)
T ss_dssp TSSSSCCCCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTCCBC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCEEEEEEEECCHHHHHHHHCCCCC
T ss_conf 78888887546772356445767688708999768999732589997689964589823899996788999998717879
Q ss_pred CCCCCCCCEEEEEEEEC
Q ss_conf 99981123799974650
Q 003708 159 EEGRLTVTVKIINCGEV 175 (801)
Q Consensus 159 ~~g~P~~~v~I~~~gvl 175 (801)
.+++|..+|+|.+||+|
T Consensus 163 ~~~~P~~~v~I~~~G~l 179 (179)
T 2wfi_A 163 AASKPFAEVRILSCGEL 179 (179)
T ss_dssp TTSCBSSCEEEEEEEEC
T ss_pred CCCCCCCCEEEEECEEC
T ss_conf 89989787599967659
No 4
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=1.00 E-value=1 Score=349.18 Aligned_cols=176 Identities=54% Similarity=0.858 Sum_probs=166.4
Q ss_pred CCCEEEEEEEECCCEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEECCCCCCCCC
Q ss_conf 98489999975890445599997699875999999998606889999999885446974899642961220777689999
Q 003708 5 KSLLVFMDVSIDGDPVERMVFELFSDIAPKTAENFRALCTGEKGIGPRTGKPLHYKGSFFHRVIKGSMAEGGDFVKRDGT 84 (801)
Q Consensus 5 ~np~v~ldtsig~~~~GRIvIeLf~d~aP~t~~nFl~lc~G~~g~g~~t~k~~~Y~Gt~f~RI~kg~~iqgGd~~~~~g~ 84 (801)
.+|+|||||++|+.++|+|+||||.++||+||+||+.||+|++|+|..+|++.||+|+.||||+++|||||||++.++|.
T Consensus 14 ~~~~v~~~~~~~~~~~G~i~~~l~~~~~P~t~~nf~~l~~~~~~~~~~~g~~~~y~~~~fhrv~~~f~~q~Gd~~~~~g~ 93 (370)
T 1ihg_A 14 SNPRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGT 93 (370)
T ss_dssp TSCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTSSBSCCTTCBEEEEETTTEEEECCTTTSSSS
T ss_pred CCCEEEEEEEECCEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEECCCEEEEEECCCEEECCCCCCCCCC
T ss_conf 89769999977987166089997688782689999997278867676678764367967689977957978998989999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEECHHHHHHHHHCCCCCCCCC
Q ss_conf 98744688888999898889890797401699986643899715898879998379999919899999983189999811
Q 003708 85 SGESIYEGKFPDESPRLKHDRPGLLSMSIADRDTLGSQFIITFKANHSLDRKYVVFGELVQGHEILKKIENVGDEEGRLT 164 (801)
Q Consensus 85 ~g~si~g~~f~dE~~~l~h~~~G~Vsma~~gp~~ngSqFfItL~~~~~LDgk~tVFGkVV~G~eVLekIe~~~d~~g~P~ 164 (801)
+|++||+..|.+|++.++|+.+|+|+||+.+|++||+||||||.++++||++|+|||+||+||+||++|+.+....+.|.
T Consensus 94 g~~~~~~~~~~~e~~~~~~~~~g~l~ma~~~~~~~~sqffi~~~~~~~ld~~~~vfG~v~~g~~v~~~i~~~~~~~~~P~ 173 (370)
T 1ihg_A 94 GGESIYGEKFEDENFHYKHDKEGLLSMANAGSNTNGSQFFITTVPTPHLDGKHVVFGQVIKGMGVAKILENVEVKGEKPA 173 (370)
T ss_dssp CCCBTTBSCBCCCCCCBCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCEETTEES
T ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCEEEEEEECCHHHHHHHHCCCCCCCCCC
T ss_conf 99988899868876776789970899815799987765999678871127982389999657799999971787788510
Q ss_pred CCEEEEEEEECCCCCC
Q ss_conf 2379997465045411
Q 003708 165 VTVKIINCGEVSEDKK 180 (801)
Q Consensus 165 ~~v~I~~~gvl~e~~k 180 (801)
.+|+|..|+++.+...
T Consensus 174 ~~v~I~~~g~l~~~~~ 189 (370)
T 1ihg_A 174 KLCVIAECGELKEGDD 189 (370)
T ss_dssp SCEEEEEEEEECTTCC
T ss_pred EEEEEEEEEEECCCCC
T ss_conf 2689898778626763
No 5
>1z81_A Cyclophilin; structural genomics, structural genomics consortium, SGC, isomerase; 2.80A {Plasmodium yoelii yoelii} SCOP: b.62.1.1
Probab=1.00 E-value=1 Score=343.78 Aligned_cols=172 Identities=43% Similarity=0.744 Sum_probs=161.6
Q ss_pred CCCCCCCEEEEEEEECCCEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEECCCCC
Q ss_conf 98889848999997589044559999769987599999999860688999999988544697489964296122077768
Q 003708 1 MAKKKSLLVFMDVSIDGDPVERMVFELFSDIAPKTAENFRALCTGEKGIGPRTGKPLHYKGSFFHRVIKGSMAEGGDFVK 80 (801)
Q Consensus 1 m~~~~np~v~ldtsig~~~~GRIvIeLf~d~aP~t~~nFl~lc~G~~g~g~~t~k~~~Y~Gt~f~RI~kg~~iqgGd~~~ 80 (801)
|.+..|++|||||++++.++|+|+||||+++||+||+||++||+++++.+ |++.+|+|+.||||+++||||+||++.
T Consensus 54 ~~~~~~~~V~~disi~~t~~G~I~ieL~~d~aP~tv~NF~~L~~~~~g~~---g~~~~Y~gt~FHRVi~~FmiQgGD~~~ 130 (229)
T 1z81_A 54 LTNPSNPVVFMDINLGNNFLGKFKFELFQNIVPKTSENFRQFCTGEYKVN---NLPVGYKNTIFHRVIKEFMIQGGDFIN 130 (229)
T ss_dssp SSSTTCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCBSS---SSBCSSTTEECCEEETTTEEEECCTTT
T ss_pred CCCCCCCEEEEEEEECCEECCCEEEEECCCCCCHHHHHHHHHHHCCCCCC---CCCCEECCCEEEEEECCCEEECCCCCC
T ss_conf 46899957999985798435648999818989779999999960888876---777548898999996897898388767
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCEEEEEE--ECHHHHHHHHHC-C
Q ss_conf 9999987446888889998988898907974016999866438997158988799983799999--198999999831-8
Q 003708 81 RDGTSGESIYEGKFPDESPRLKHDRPGLLSMSIADRDTLGSQFIITFKANHSLDRKYVVFGELV--QGHEILKKIENV-G 157 (801)
Q Consensus 81 ~~g~~g~si~g~~f~dE~~~l~h~~~G~Vsma~~gp~~ngSqFfItL~~~~~LDgk~tVFGkVV--~G~eVLekIe~~-~ 157 (801)
++|.++++||+..|.+|++.|+|+.+|+|+||+.++++|++||||||.++++||++|+|||+|| +||+||++|+.+ +
T Consensus 131 g~G~Gg~siyg~~f~dE~~~l~h~~~G~LsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~~eGmdVv~~I~~~~t 210 (229)
T 1z81_A 131 HNGSGSLSIYGEKFDDENFDIKHDKEGLLSMANSGPNTNGCQFFITTKKCEWLDGKNVVFGRIIDNDSLLLLKKIENVSV 210 (229)
T ss_dssp SSSCCCCBTTBSCCCCCCCCSCCCSTTEEEECCSSSSCCCSCEEEESSCCGGGBTTBCEEEEECSHHHHHHHHHHHHSCB
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEEECCCHHHHHHHHHCCC
T ss_conf 89988776678832553456555787289866579998134799978998545897208999995674899999981787
Q ss_pred CCC-CCCCCCEEEEEEEEC
Q ss_conf 999-981123799974650
Q 003708 158 DEE-GRLTVTVKIINCGEV 175 (801)
Q Consensus 158 d~~-g~P~~~v~I~~~gvl 175 (801)
+.+ ++|..+|+|.+||+|
T Consensus 211 ~~~~~~P~~~V~I~~cG~l 229 (229)
T 1z81_A 211 TPYIYKPKIPINVVECGEL 229 (229)
T ss_dssp CTTTCCBSSCEEEEEEEEC
T ss_pred CCCCCCCCCCEEEEECEEC
T ss_conf 7779977798699957219
No 6
>2poy_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, isomerase, S genomics, structural genomics consortium; HET: BMT; 1.80A {Cryptosporidium parvum iowa II} PDB: 2plu_A*
Probab=1.00 E-value=1 Score=343.21 Aligned_cols=172 Identities=51% Similarity=0.800 Sum_probs=164.0
Q ss_pred CCCCCCEEEEEEEECCCEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEECCCCCC
Q ss_conf 88898489999975890445599997699875999999998606889999999885446974899642961220777689
Q 003708 2 AKKKSLLVFMDVSIDGDPVERMVFELFSDIAPKTAENFRALCTGEKGIGPRTGKPLHYKGSFFHRVIKGSMAEGGDFVKR 81 (801)
Q Consensus 2 ~~~~np~v~ldtsig~~~~GRIvIeLf~d~aP~t~~nFl~lc~G~~g~g~~t~k~~~Y~Gt~f~RI~kg~~iqgGd~~~~ 81 (801)
....+|+|||||++++.++|+|+||||.++||+||+||++||+|++|++. .+++++|+|+.||||+++||||+||+..+
T Consensus 15 ~~~~~~~v~~di~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~-~~~~~~Y~g~~FhRVi~~f~iQgGd~~~~ 93 (186)
T 2poy_A 15 YFQGNPVVYFDISIGQTPAGRITMELFADKVPITAENFRALCTGEKGMGQ-SGKPLCYTGSFFHRIIPQFMIQGGDFTRG 93 (186)
T ss_dssp ---CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCT-TSSBSCCTTCBCCEEETTTEEEECCTTTS
T ss_pred CCCCCCEEEEEEEECCEECCCEEEEEECCCCCHHHHHHHHHHCCCCCCCC-CCCCCEECCCEEEEEECCCEEEECCCCCC
T ss_conf 55789879999868987466389998078896799999998536677566-67654388989999947989995998788
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEECHHHHHHHHHCCCCCC
Q ss_conf 99998744688888999898889890797401699986643899715898879998379999919899999983189999
Q 003708 82 DGTSGESIYEGKFPDESPRLKHDRPGLLSMSIADRDTLGSQFIITFKANHSLDRKYVVFGELVQGHEILKKIENVGDEEG 161 (801)
Q Consensus 82 ~g~~g~si~g~~f~dE~~~l~h~~~G~Vsma~~gp~~ngSqFfItL~~~~~LDgk~tVFGkVV~G~eVLekIe~~~d~~g 161 (801)
+|.++++||+..|++|++.|+|+.+|+|+||+.++++|++||||||.++++||++|+|||+||+||+||++|+.+.+.++
T Consensus 94 ~G~gg~si~g~~f~dE~~~l~h~~~G~lsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~ 173 (186)
T 2poy_A 94 DGTGGESIYGSKFRDENFVYTHDAPFLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGKVLEGMEVVKSIEKCGSQNG 173 (186)
T ss_dssp SSSCCCCTTC-CBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHTCCTTS
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCEEEEEEEECCHHHHHHHHHCCCCCC
T ss_conf 88888765887224755565668876899843899986437999878985458971189999667899999970889898
Q ss_pred CCCCCEEEEEEEE
Q ss_conf 8112379997465
Q 003708 162 RLTVTVKIINCGE 174 (801)
Q Consensus 162 ~P~~~v~I~~~gv 174 (801)
+|..+|+|.+||+
T Consensus 174 ~P~~~v~I~~cG~ 186 (186)
T 2poy_A 174 KPTKSVCITASGV 186 (186)
T ss_dssp CCSSCEEEEEEEC
T ss_pred CCCCCEEEEECCC
T ss_conf 8878879996889
No 7
>2igv_A Peptidyl-prolyl CIS-trans isomerase 3; rotamase; 1.67A {Caenorhabditis elegans} SCOP: b.62.1.1 PDB: 1e3b_A 1e8k_A 1dyw_A 2igw_A 2hqj_A
Probab=1.00 E-value=1 Score=341.99 Aligned_cols=171 Identities=49% Similarity=0.858 Sum_probs=163.1
Q ss_pred CCCEEEEEEEECCCEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEECCCCCCCCC
Q ss_conf 98489999975890445599997699875999999998606889999999885446974899642961220777689999
Q 003708 5 KSLLVFMDVSIDGDPVERMVFELFSDIAPKTAENFRALCTGEKGIGPRTGKPLHYKGSFFHRVIKGSMAEGGDFVKRDGT 84 (801)
Q Consensus 5 ~np~v~ldtsig~~~~GRIvIeLf~d~aP~t~~nFl~lc~G~~g~g~~t~k~~~Y~Gt~f~RI~kg~~iqgGd~~~~~g~ 84 (801)
.||+|||||++++.++|+|+||||.++||+||+||++||++++|+|. .++++||+|+.||||+++||||+||+..++|.
T Consensus 2 ~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~g~-~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G~ 80 (173)
T 2igv_A 2 SRSKVFFDITIGGKASGRIVMELYDDVVPKTAGNFRALCTGENGIGK-SGKPLHFKGSKFHRIIPNFMIQGGDFTRGNGT 80 (173)
T ss_dssp CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCT-TSSBSCCTTCBCCEEETTTEEEECCTTTSSSS
T ss_pred CCCEEEEEEEECCEECCEEEEEEECCCCCHHHHHHHHHHCCCCCCCC-CCCCCEECCCEEEEEECCCEEECCCCCCCCCC
T ss_conf 88889999978998464199999078894799999998657878776-67666588989999978978983887788888
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEECHHHHHHHHHCCCCCCCCC
Q ss_conf 98744688888999898889890797401699986643899715898879998379999919899999983189999811
Q 003708 85 SGESIYEGKFPDESPRLKHDRPGLLSMSIADRDTLGSQFIITFKANHSLDRKYVVFGELVQGHEILKKIENVGDEEGRLT 164 (801)
Q Consensus 85 ~g~si~g~~f~dE~~~l~h~~~G~Vsma~~gp~~ngSqFfItL~~~~~LDgk~tVFGkVV~G~eVLekIe~~~d~~g~P~ 164 (801)
++++||+..|.+|++.|+|+.+|+|+||+.+|++|++||||||.++++||++|+|||+||+||+||++|+.+.+.+++|.
T Consensus 81 gg~siyg~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~vFG~Vv~G~dvv~~I~~~~t~~~~P~ 160 (173)
T 2igv_A 81 GGESIYGEKFPDENFKEKHTGPGVLSMANAGPNTNGSQFFLCTVKTEWLDGKHVVFGRVVEGLDVVKAVESNGSQSGKPV 160 (173)
T ss_dssp CCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTSCCS
T ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCEEEEEEEECCHHHHHHHHHCCCCCCCCC
T ss_conf 98855788316744565778972999855899984208999868753248972599999658899999972788799887
Q ss_pred CCEEEEEEEECC
Q ss_conf 237999746504
Q 003708 165 VTVKIINCGEVS 176 (801)
Q Consensus 165 ~~v~I~~~gvl~ 176 (801)
.+|+|.+||+|.
T Consensus 161 ~~v~I~~~g~l~ 172 (173)
T 2igv_A 161 KDCMIADCGQLK 172 (173)
T ss_dssp SCEEEEEEEEEC
T ss_pred CCEEEEEEEEEC
T ss_conf 877999968873
No 8
>1mzw_A Cyclophilin H, U-snRNP-ASSOCIATED cyclophilin; cyclophilin, peptidyl-prolyl-CIS/trans isomerase, spliceosome, U4/U6-60K protein, WD protein; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1qoi_A
Probab=1.00 E-value=1 Score=338.08 Aligned_cols=171 Identities=50% Similarity=0.804 Sum_probs=161.3
Q ss_pred CCCCCCEEEEEEEECCCEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEECCCCCC
Q ss_conf 88898489999975890445599997699875999999998606889999999885446974899642961220777689
Q 003708 2 AKKKSLLVFMDVSIDGDPVERMVFELFSDIAPKTAENFRALCTGEKGIGPRTGKPLHYKGSFFHRVIKGSMAEGGDFVKR 81 (801)
Q Consensus 2 ~~~~np~v~ldtsig~~~~GRIvIeLf~d~aP~t~~nFl~lc~G~~g~g~~t~k~~~Y~Gt~f~RI~kg~~iqgGd~~~~ 81 (801)
.+..||+|||||++++..+|+|+||||.++||+||+||++||++++|. .+++.+|+|+.||||+++||||+||+..+
T Consensus 6 ~~~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~---~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~ 82 (177)
T 1mzw_A 6 SSPVNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGEFRK---DGVPIGYKGSTFHRVIKDFMIQGGDFVNG 82 (177)
T ss_dssp CCCCCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCEE---TTEECSSTTCBCCEEETTTEEEECCTTTS
T ss_pred CCCCCCEEEEEEEECCEECEEEEEEECCCCCCHHHHHHHHHHHCCCCC---CCCCCEECCCEEEEEECCCEEECCCCCCC
T ss_conf 689997799999789840325999981898967999999997345677---67664088989999978988984886568
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEECHHHHHHHHHC-CCCC
Q ss_conf 999987446888889998988898907974016999866438997158988799983799999198999999831-8999
Q 003708 82 DGTSGESIYEGKFPDESPRLKHDRPGLLSMSIADRDTLGSQFIITFKANHSLDRKYVVFGELVQGHEILKKIENV-GDEE 160 (801)
Q Consensus 82 ~g~~g~si~g~~f~dE~~~l~h~~~G~Vsma~~gp~~ngSqFfItL~~~~~LDgk~tVFGkVV~G~eVLekIe~~-~d~~ 160 (801)
+|.++++||+..|++|++.|+|+.+|+|+||+.++++|++||||||+++++||++|+|||+||+||+||++|+.+ ++.+
T Consensus 83 ~G~gg~si~g~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv~G~dvv~~I~~~~t~~~ 162 (177)
T 1mzw_A 83 DGTGVASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHVVFGKIIDGLLVMRKIENVPTGPN 162 (177)
T ss_dssp SSCCCCCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCGG
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEECCHHHHHHHHHCCCCCC
T ss_conf 88888765787246744565658888999734899982038999779998668982499998678899999970882999
Q ss_pred CCCCCCEEEEEEEEC
Q ss_conf 981123799974650
Q 003708 161 GRLTVTVKIINCGEV 175 (801)
Q Consensus 161 g~P~~~v~I~~~gvl 175 (801)
++|..+|+|.+||+|
T Consensus 163 ~~P~~~v~I~~cG~l 177 (177)
T 1mzw_A 163 NKPKLPVVISQCGEM 177 (177)
T ss_dssp GCBSSCEEEEEEEEC
T ss_pred CCCCCCEEEEECEEC
T ss_conf 978788799966629
No 9
>1qng_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, cyclophilin-cyclosporin complex, immunosuppressant, cyclophilin; HET: BMT; 2.1A {Plasmodium falciparum} SCOP: b.62.1.1 PDB: 1qnh_A*
Probab=1.00 E-value=1 Score=336.85 Aligned_cols=169 Identities=50% Similarity=0.855 Sum_probs=159.9
Q ss_pred CCCEEEEEEEECCCEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEECCCCCCCCC
Q ss_conf 98489999975890445599997699875999999998606889999999885446974899642961220777689999
Q 003708 5 KSLLVFMDVSIDGDPVERMVFELFSDIAPKTAENFRALCTGEKGIGPRTGKPLHYKGSFFHRVIKGSMAEGGDFVKRDGT 84 (801)
Q Consensus 5 ~np~v~ldtsig~~~~GRIvIeLf~d~aP~t~~nFl~lc~G~~g~g~~t~k~~~Y~Gt~f~RI~kg~~iqgGd~~~~~g~ 84 (801)
.||+|||||++++.++|+|+||||.++||+||+||++||+|+ |++ ..+++++|+|+.||||+++||||+||++.++|.
T Consensus 2 ~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~-g~g-~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~ 79 (170)
T 1qng_A 2 KRSKVFFDISIDNSNAGRIIFELFSDITPRTCENFRALCTGE-KIG-SRGKNLHYKNSIFHRIIPQFMCQGGDITNGNGS 79 (170)
T ss_dssp CSCEEEEEEEESSSEEEEEEEEECTTTCHHHHHHHHHHHHTC-EEC-TTSSEECCTTCBCCEEETTTEEEECCTTTSSSS
T ss_pred CCCEEEEEEEECCEECEEEEEEECCCCCCHHHHHHHHHHCCC-CCC-CCCCCCEECCCEEEEEECCCEEECCCCCCCCCC
T ss_conf 987899998589983303999985888977999999985568-867-657654288979999978978974886678898
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEECHHHHHHHHHCCCCCCCCC
Q ss_conf 98744688888999898889890797401699986643899715898879998379999919899999983189999811
Q 003708 85 SGESIYEGKFPDESPRLKHDRPGLLSMSIADRDTLGSQFIITFKANHSLDRKYVVFGELVQGHEILKKIENVGDEEGRLT 164 (801)
Q Consensus 85 ~g~si~g~~f~dE~~~l~h~~~G~Vsma~~gp~~ngSqFfItL~~~~~LDgk~tVFGkVV~G~eVLekIe~~~d~~g~P~ 164 (801)
++++||+..|.+|++.|+|+.+|+|+||+.++++|++||||||.++++||++|+|||+||+||+||++|+.+...+++|.
T Consensus 80 gg~si~g~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~Ldg~~~vFG~Vv~G~dvv~~I~~~~t~~~~P~ 159 (170)
T 1qng_A 80 GGESIYGRSFTDENFNMKHDQPGLLSMANAGPNTNSSQFFITLVPCPWLDGKHVVFGKVIEGMNVVREMEKEGAKSGYVK 159 (170)
T ss_dssp CCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTCCCS
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCEEEEEEEECCHHHHHHHHHCCCCCCCCC
T ss_conf 88653677346533445668788899865699984437999888996448971189999787999999972788799777
Q ss_pred CCEEEEEEEEC
Q ss_conf 23799974650
Q 003708 165 VTVKIINCGEV 175 (801)
Q Consensus 165 ~~v~I~~~gvl 175 (801)
.+|+|.+||+|
T Consensus 160 ~~v~I~~cG~l 170 (170)
T 1qng_A 160 RSVVITDCGEL 170 (170)
T ss_dssp SCEEEEEEEEC
T ss_pred CCEEEEECEEC
T ss_conf 98699956409
No 10
>3rdd_A Peptidyl-prolyl CIS-trans isomerase A; beta barrel, cytosolic, inhibito isomerase-isomerase inhibitor complex; HET: EA4; 2.14A {Homo sapiens}
Probab=1.00 E-value=1 Score=331.77 Aligned_cols=165 Identities=50% Similarity=0.861 Sum_probs=157.7
Q ss_pred CCCCEEEEEEEECCCEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEECCCCCCCC
Q ss_conf 89848999997589044559999769987599999999860688999999988544697489964296122077768999
Q 003708 4 KKSLLVFMDVSIDGDPVERMVFELFSDIAPKTAENFRALCTGEKGIGPRTGKPLHYKGSFFHRVIKGSMAEGGDFVKRDG 83 (801)
Q Consensus 4 ~~np~v~ldtsig~~~~GRIvIeLf~d~aP~t~~nFl~lc~G~~g~g~~t~k~~~Y~Gt~f~RI~kg~~iqgGd~~~~~g 83 (801)
..||+|||||++++.++|+|+||||.++||+||+||++||++++|++ |+|+.||||+++|||||||+..++|
T Consensus 20 ~~~p~v~~di~i~~~~~G~I~ieL~~~~aP~t~~NF~~L~~~~~g~~--------Y~g~~FhRvi~~f~iQgGd~~~~~g 91 (184)
T 3rdd_A 20 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG--------YKGSCFHRIIPGFMCQGGDFTRHNG 91 (184)
T ss_dssp -CCCEEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTTSCS--------STTCBCCEEETTTEEEECCTTTSSS
T ss_pred CCCCEEEEEEEECCEEEEEEEEEEECCCCCHHHHHHHHHHCCCCCCC--------CCCCEEEECCCCCEEEECCCCCCCC
T ss_conf 78988999996899760479999908888089999999844376754--------0798989814884999699888888
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEECHHHHHHHHHCCCCCCCC
Q ss_conf 99874468888899989888989079740169998664389971589887999837999991989999998318999981
Q 003708 84 TSGESIYEGKFPDESPRLKHDRPGLLSMSIADRDTLGSQFIITFKANHSLDRKYVVFGELVQGHEILKKIENVGDEEGRL 163 (801)
Q Consensus 84 ~~g~si~g~~f~dE~~~l~h~~~G~Vsma~~gp~~ngSqFfItL~~~~~LDgk~tVFGkVV~G~eVLekIe~~~d~~g~P 163 (801)
.+++++|+..|.+|++.++|+.+|+|+||+.++++|++||||||.++++||++|+|||+||+||+||++|+.+.+.+++|
T Consensus 92 ~gg~si~g~~~~de~~~l~h~~~G~lsmA~~gp~s~gSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~~g~P 171 (184)
T 3rdd_A 92 TGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKT 171 (184)
T ss_dssp SCCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTSCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCCC
T ss_conf 79866578743686555466887299997689998331899991796343899209999925999999998458889989
Q ss_pred CCCEEEEEEEECC
Q ss_conf 1237999746504
Q 003708 164 TVTVKIINCGEVS 176 (801)
Q Consensus 164 ~~~v~I~~~gvl~ 176 (801)
..+|+|.+||+|.
T Consensus 172 ~~~v~I~~cG~l~ 184 (184)
T 3rdd_A 172 SKKITIADCGQLE 184 (184)
T ss_dssp SSCEEEEEEEECC
T ss_pred CCCEEEEECEEEC
T ss_conf 5776998573789
Done!