BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003710
(801 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 886 bits (2289), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/741 (58%), Positives = 534/741 (72%), Gaps = 15/741 (2%)
Query: 72 TRALQELVSSGSMESACYLFEKMSYLDTYIWNVVIRGFVDNGLFQEAVEFHHRMVCEGFK 131
TRAL+ S ME A LF++M+ D ++WNV+I+GF GL+ EAV+F+ RMV G K
Sbjct: 68 TRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVK 127
Query: 132 ADYFTYPFVIKACAGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERM 191
AD FTYPFVIK+ AG+ L EG+K+H + K G SDVYVCNSLI +YMKLGC AE++
Sbjct: 128 ADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKV 187
Query: 192 FDEMPVRDTVSWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCL 251
F+EMP RD VSWNSMI GY ++GDG SSL+ FKEM CG + DRFS +SALGA S
Sbjct: 188 FEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSP 247
Query: 252 KIGKEIHCQVIKSGLEM-DVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGG 310
K+GKEIHC ++S +E DVMV TS++DMY K G V YAER+FN + RNIVAWN M+G
Sbjct: 248 KMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGC 307
Query: 311 YVVNAHFLESFSCLRKMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGFLP 370
Y N ++F C +KM E + L PD IT INLLP+ A+LEG++IHGYA+R+GFLP
Sbjct: 308 YARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA----SAILEGRTIHGYAMRRGFLP 363
Query: 371 NVALETALIDMYAGSGALKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMELFQDLW 430
++ LETALIDMY G LK E +F M EKN++SWN++IAAYV+NG+N A+ELFQ+LW
Sbjct: 364 HMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELW 423
Query: 431 SEPLKPDAMTFASILPAYAEIATLSDSMQIHSLITKLGLVSNIYISNSIVYMYAKCGDLQ 490
L PD+ T ASILPAYAE +LS+ +IH+ I K SN I NS+V+MYA CGDL+
Sbjct: 424 DSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLE 483
Query: 491 TAR---------DVVSWNVIIMAYAIHGLGKISIQLFSEMREKGIKPNESTFVSLLSSCS 541
AR DVVSWN IIMAYA+HG G+IS+ LFSEM + PN+STF SLL++CS
Sbjct: 484 DARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACS 543
Query: 542 ISGMVDEGWNYFDSMRKDYGIVPGIEHYGCIIDLLGRIGNLDQAKRFIEEMPSAPTARIW 601
ISGMVDEGW YF+SM+++YGI PGIEHYGC++DL+GR GN AKRF+EEMP PTARIW
Sbjct: 544 ISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIW 603
Query: 602 GALLTASRKNNDIVSAEFAARHVLSSAQDNTGCYVLLSNMYAEAGRWEDVEQIKAIMEKE 661
G+LL ASR + DI AEFAA + DNTGCYVLL NMYAEAGRWEDV +IK +ME +
Sbjct: 604 GSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESK 663
Query: 662 GLKKTTGCSMFEKNGETHRFINQDRSHSKTYLIYNVLDILLRKIG-EDFYIHNVSKFSPA 720
G+ +T+ S E G++H F N DRSH T IY VLD++ R +G ED Y+H VS+ P
Sbjct: 664 GISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVSRMVGEEDIYVHCVSRLRPE 723
Query: 721 HLMKNRAKSPHHHSVRLAISFGLISTSVGNPVLVRNNTRICEDCHSAVKKISEITKRELI 780
L+K+R+ SP HSVRLA FGLIST G V VRNNTRIC CH ++K S +T+RE++
Sbjct: 724 TLVKSRSNSPRRHSVRLATCFGLISTETGRRVTVRNNTRICRKCHEFLEKASRLTRREIV 783
Query: 781 VRDPKCFHHFRNGCCSCGDYW 801
V D K FHHF NG CSCG+YW
Sbjct: 784 VGDSKIFHHFSNGRCSCGNYW 804
Score = 96.7 bits (239), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 118/250 (47%), Gaps = 2/250 (0%)
Query: 61 KKSIGPRNITKTRALQELVSSGSMESACYLFEKMSYLDTYIWNVVIRGFVDNGLFQEAVE 120
++ P + +T + G ++SA +F++M+ + WN +I +V NG A+E
Sbjct: 358 RRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALE 417
Query: 121 FHHRMVCEGFKADYFTYPFVIKACAGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYM 180
+ D T ++ A A L LSEG ++H + KS S+ + NSL+ MY
Sbjct: 418 LFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYA 477
Query: 181 KLGCVECAERMFDEMPVRDTVSWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLIS 240
G +E A + F+ + ++D VSWNS+I Y G G S+ F EM + ++ + S
Sbjct: 478 MCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFAS 537
Query: 241 ALGAISIEGCLKIGKEIHCQVIKS-GLEMDVMVQTSLVDMYGKCGVVDYAERLF-NMIFP 298
L A SI G + G E + + G++ + ++D+ G+ G A+R M F
Sbjct: 538 LLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFV 597
Query: 299 RNIVAWNAMV 308
W +++
Sbjct: 598 PTARIWGSLL 607
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 524 bits (1350), Expect = e-147, Method: Compositional matrix adjust.
Identities = 278/808 (34%), Positives = 451/808 (55%), Gaps = 23/808 (2%)
Query: 4 PAPLAIHSHFFNSNSPTRRNPSQKQFKIPETNPTPSFETNARSSKSTHIHKNQTITSKKS 63
P P + H HF S++ + P+ R S + + + K
Sbjct: 15 PNPPSRHRHFL----------SERNYIPANVYEHPAALLLERCSSLKELRQILPLVFKNG 64
Query: 64 IGPRNITKTRALQELVSSGSMESACYLFEKMSYLDTYIWNVVIRGFVDNGLFQEAVEFHH 123
+ + +T+ + GS++ A +FE + +++ +++GF +A++F
Sbjct: 65 LYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFV 124
Query: 124 RMVCEGFKADYFTYPFVIKACAGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLG 183
RM + + + + +++K C L G+++HG L KSG + D++ L MY K
Sbjct: 125 RMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCR 184
Query: 184 CVECAERMFDEMPVRDTVSWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALG 243
V A ++FD MP RD VSWN+++ GY G +L K M L+ +++S L
Sbjct: 185 QVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLP 244
Query: 244 AISIEGCLKIGKEIHCQVIKSGLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVA 303
A+S + +GKEIH ++SG + V + T+LVDMY KCG ++ A +LF+ + RN+V+
Sbjct: 245 AVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVS 304
Query: 304 WNAMVGGYVVNAHFLESFSCLRKMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYA 363
WN+M+ YV N + E+ +KML D+ + P ++++ L +C LG L G+ IH +
Sbjct: 305 WNSMIDAYVQNENPKEAMLIFQKML-DEGVKPTDVSVMGALHACADLGDLERGRFIHKLS 363
Query: 364 IRKGFLPNVALETALIDMYAGSGALKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAM 423
+ G NV++ +LI MY + +FG + + LVSWNAMI + +NG+ +A+
Sbjct: 364 VELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDAL 423
Query: 424 ELFQDLWSEPLKPDAMTFASILPAYAEIATLSDSMQIHSLITKLGLVSNIYISNSIVYMY 483
F + S +KPD T+ S++ A AE++ + IH ++ + L N++++ ++V MY
Sbjct: 424 NYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMY 483
Query: 484 AKCG---------DLQTARDVVSWNVIIMAYAIHGLGKISIQLFSEMREKGIKPNESTFV 534
AKCG D+ + R V +WN +I Y HG GK +++LF EM++ IKPN TF+
Sbjct: 484 AKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFL 543
Query: 535 SLLSSCSISGMVDEGWNYFDSMRKDYGIVPGIEHYGCIIDLLGRIGNLDQAKRFIEEMPS 594
S++S+CS SG+V+ G F M+++Y I ++HYG ++DLLGR G L++A FI +MP
Sbjct: 544 SVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPV 603
Query: 595 APTARIWGALLTASRKNNDIVSAEFAARHVLSSAQDNTGCYVLLSNMYAEAGRWEDVEQI 654
P ++GA+L A + + ++ AE AA + D+ G +VLL+N+Y A WE V Q+
Sbjct: 604 KPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQV 663
Query: 655 KAIMEKEGLKKTTGCSMFEKNGETHRFINQDRSHSKTYLIYNVLDILLRKIGEDFYIHNV 714
+ M ++GL+KT GCSM E E H F + +H + IY L+ L+ I E Y+ +
Sbjct: 664 RVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDT 723
Query: 715 S-KFSPAHLMKNRAKSPHHHSVRLAISFGLISTSVGNPVLVRNNTRICEDCHSAVKKISE 773
+ + +K + S HS +LAISFGL++T+ G + VR N R+C DCH+A K IS
Sbjct: 724 NLVLGVENDVKEQLLST--HSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISL 781
Query: 774 ITKRELIVRDPKCFHHFRNGCCSCGDYW 801
+T RE++VRD + FHHF+NG CSCGDYW
Sbjct: 782 VTGREIVVRDMQRFHHFKNGACSCGDYW 809
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 504 bits (1297), Expect = e-141, Method: Compositional matrix adjust.
Identities = 282/793 (35%), Positives = 449/793 (56%), Gaps = 43/793 (5%)
Query: 30 KIPETNPTPSFETNARSSKSTHIHKNQTITSKKSIGPRNITKTRALQELVSS-GSMESAC 88
+I + + + TN +S+K H + + SK+ +N+ + L L G++ A
Sbjct: 53 EIDDVHTLFRYCTNLQSAKCLHA---RLVVSKQ---IQNVCISAKLVNLYCYLGNVALAR 106
Query: 89 YLFEKMSYLDTYIWNVVIRGFVDNGLFQEAVE-FHHRMVCEGFKADYFTYPFVIKACAGL 147
+ F+ + D Y WN++I G+ G E + F M+ G DY T+P V+KAC +
Sbjct: 107 HTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTV 166
Query: 148 LYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPVRDTVSWNSMI 207
+ +G K+H K G DVYV SLI +Y + V A +FDEMPVRD SWN+MI
Sbjct: 167 I---DGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMI 223
Query: 208 GGYCSVGDGVSSLVFFKEMQNCGLR-YDRFSLISALGAISIEGCLKIGKEIHCQVIKSGL 266
GYC G+ +L + GLR D +++S L A + G G IH IK GL
Sbjct: 224 SGYCQSGNAKEALTL-----SNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGL 278
Query: 267 EMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVVNAHFLESFSCLRK 326
E ++ V L+D+Y + G + +++F+ ++ R++++WN+++ Y +N L + S ++
Sbjct: 279 ESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQE 338
Query: 327 MLEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKG-FLPNVALETALIDMYAGS 385
M + PDC+T+I+L ++LG + +S+ G+ +RKG FL ++ + A++ MYA
Sbjct: 339 M-RLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKL 397
Query: 386 GALKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMELFQDLWSE-PLKPDAMTFASI 444
G + +F + +++SWN +I+ Y +NG EA+E++ + E + + T+ S+
Sbjct: 398 GLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSV 457
Query: 445 LPAYAEIATLSDSMQIHSLITKLGLVSNIYISNSIVYMYAKCGDLQTARDV--------- 495
LPA ++ L M++H + K GL ++++ S+ MY KCG L+ A +
Sbjct: 458 LPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNS 517
Query: 496 VSWNVIIMAYAIHGLGKISIQLFSEMREKGIKPNESTFVSLLSSCSISGMVDEGWNYFDS 555
V WN +I + HG G+ ++ LF EM ++G+KP+ TFV+LLS+CS SG+VDEG F+
Sbjct: 518 VPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEM 577
Query: 556 MRKDYGIVPGIEHYGCIIDLLGRIGNLDQAKRFIEEMPSAPTARIWGALLTASRKNNDIV 615
M+ DYGI P ++HYGC++D+ GR G L+ A +FI+ M P A IWGALL+A R + ++
Sbjct: 578 MQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVD 637
Query: 616 SAEFAARHVLSSAQDNTGCYVLLSNMYAEAGRWEDVEQIKAIMEKEGLKKTTGCSMFEKN 675
+ A+ H+ ++ G +VLLSNMYA AG+WE V++I++I +GL+KT G S E +
Sbjct: 638 LGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVD 697
Query: 676 GETHRFINQDRSHSKTYLIYNVLDIL---LRKIG----EDFYIHNVSKFSPAHLMKNRAK 728
+ F +++H +Y L L L+ IG F + +V H++ +
Sbjct: 698 NKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMS--- 754
Query: 729 SPHHHSVRLAISFGLISTSVGNPVLVRNNTRICEDCHSAVKKISEITKRELIVRDPKCFH 788
HS RLAI+F LI+T + + N R+C DCHS K IS+IT+RE+IVRD FH
Sbjct: 755 ----HSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFH 810
Query: 789 HFRNGCCSCGDYW 801
HF+NG CSCGDYW
Sbjct: 811 HFKNGVCSCGDYW 823
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 491 bits (1264), Expect = e-138, Method: Compositional matrix adjust.
Identities = 267/738 (36%), Positives = 422/738 (57%), Gaps = 20/738 (2%)
Query: 75 LQELVSSGSMESACYLFEKMSYLDTYIWNVVIRGFVDNGLFQEAVEFHHRMV-CEGFKAD 133
L V G++ A Y+F KMS + + WNV++ G+ G F EA+ +HRM+ G K D
Sbjct: 136 LAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPD 195
Query: 134 YFTYPFVIKACAGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERMFD 193
+T+P V++ C G+ L+ G++VH + + G D+ V N+LI MY+K G V+ A +FD
Sbjct: 196 VYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFD 255
Query: 194 EMPVRDTVSWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKI 253
MP RD +SWN+MI GY G L F M+ + D +L S + A + G ++
Sbjct: 256 RMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRL 315
Query: 254 GKEIHCQVIKSGLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVV 313
G++IH VI +G +D+ V SL MY G AE+LF+ + ++IV+W M+ GY
Sbjct: 316 GRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEY 375
Query: 314 NAHFLESFSCLRKMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGFLPNVA 373
N ++ R M++ D++ PD IT+ +L +C LG L G +H AI+ + V
Sbjct: 376 NFLPDKAIDTYR-MMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVI 434
Query: 374 LETALIDMYAGSGALKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMELFQDLWSEP 433
+ LI+MY+ + +F ++ KN++SW ++IA N + EA+ + +
Sbjct: 435 VANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM-KMT 493
Query: 434 LKPDAMTFASILPAYAEIATLSDSMQIHSLITKLGLVSNIYISNSIVYMYAKCGDLQTA- 492
L+P+A+T + L A A I L +IH+ + + G+ + ++ N+++ MY +CG + TA
Sbjct: 494 LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAW 553
Query: 493 -------RDVVSWNVIIMAYAIHGLGKISIQLFSEMREKGIKPNESTFVSLLSSCSISGM 545
+DV SWN+++ Y+ G G + ++LF M + ++P+E TF+SLL CS S M
Sbjct: 554 SQFNSQKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQM 613
Query: 546 VDEGWNYFDSMRKDYGIVPGIEHYGCIIDLLGRIGNLDQAKRFIEEMPSAPTARIWGALL 605
V +G YF M +DYG+ P ++HY C++DLLGR G L +A +FI++MP P +WGALL
Sbjct: 614 VRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALL 672
Query: 606 TASRKNNDIVSAEFAARHVLSSAQDNTGCYVLLSNMYAEAGRWEDVEQIKAIMEKEGLKK 665
A R ++ I E +A+H+ + + G Y+LL N+YA+ G+W +V +++ +M++ GL
Sbjct: 673 NACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTV 732
Query: 666 TTGCSMFEKNGETHRFINQDRSHSKTYLIYNVLDILLRKIGEDFYIHNVSKFSPAHLMKN 725
GCS E G+ H F++ D+ H +T I VL+ K+ E ++K S + M
Sbjct: 733 DAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSE----VGLTKISESSSMDE 788
Query: 726 RAKSPHH----HSVRLAISFGLISTSVGNPVLVRNNTRICEDCHSAVKKISEITKRELIV 781
S HS R AI+FGLI+T G P+ V N +CE+CH VK IS+ +RE+ V
Sbjct: 789 TEISRDEIFCGHSERKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRREISV 848
Query: 782 RDPKCFHHFRNGCCSCGD 799
RD + FHHF++G CSCGD
Sbjct: 849 RDAEHFHHFKDGECSCGD 866
Score = 203 bits (516), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 125/437 (28%), Positives = 224/437 (51%), Gaps = 18/437 (4%)
Query: 106 IRGFVDNGLFQEAVEFHHRMVCEGFKADYFTYPFVIKACAGLLYLSEGEKVHGSLFKSGL 165
+ G NG +EA++ + M D + +++ C EG KV+ S
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 166 NSDVYVCNSLIVMYMKLGCVECAERMFDEMPVRDTVSWNSMIGGYCSVGDGVSSLVFFKE 225
+ V + N+ + M+++ G + A +F +M R+ SWN ++GGY G ++ +
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 226 MQNC-GLRYDRFSLISALGAISIEGCLKIGKEIHCQVIKSGLEMDVMVQTSLVDMYGKCG 284
M G++ D ++ L L GKE+H V++ G E+D+ V +L+ MY KCG
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCG 245
Query: 285 VVDYAERLFNMIFPRNIVAWNAMVGGYVVNA---HFLESFSCLRKMLEDDNLNPDCITII 341
V A LF+ + R+I++WNAM+ GY N LE F +R + +++PD +T+
Sbjct: 246 DVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGL----SVDPDLMTLT 301
Query: 342 NLLPSCTKLGALLEGKSIHGYAIRKGFLPNVALETALIDMYAGSGALKMTEKLFGSMIEK 401
+++ +C LG G+ IH Y I GF ++++ +L MY +G+ + EKLF M K
Sbjct: 302 SVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERK 361
Query: 402 NLVSWNAMIAAYVRNGQNREAMELFQDLWSEPLKPDAMTFASILPAYAEIATLSDSMQIH 461
++VSW MI+ Y N +A++ ++ + + +KPD +T A++L A A + L +++H
Sbjct: 362 DIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELH 421
Query: 462 SLITKLGLVSNIYISNSIVYMYAKCGDLQTARD---------VVSWNVIIMAYAIHGLGK 512
L K L+S + ++N+++ MY+KC + A D V+SW II ++
Sbjct: 422 KLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCF 481
Query: 513 ISIQLFSEMREKGIKPN 529
++ +M+ ++PN
Sbjct: 482 EALIFLRQMKMT-LQPN 497
Score = 163 bits (413), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 106/432 (24%), Positives = 193/432 (44%), Gaps = 11/432 (2%)
Query: 209 GYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKIGKEIHCQVIKSGLEM 268
G C+ G ++ MQ + D ++ + + + G +++ + S +
Sbjct: 68 GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSL 127
Query: 269 DVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVVNAHFLESFSCLRKML 328
V + + + M+ + G + A +F + RN+ +WN +VGGY +F E+ +ML
Sbjct: 128 GVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRML 187
Query: 329 EDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGFLPNVALETALIDMYAGSGAL 388
+ PD T +L +C + L GK +H + +R G+ ++ + ALI MY G +
Sbjct: 188 WVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDV 247
Query: 389 KMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMELFQDLWSEPLKPDAMTFASILPAY 448
K LF M ++++SWNAMI+ Y NG E +ELF + + PD MT S++ A
Sbjct: 248 KSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISAC 307
Query: 449 AEIATLSDSMQIHSLITKLGLVSNIYISNSIVYMYAKCGDLQTA---------RDVVSWN 499
+ IH+ + G +I + NS+ MY G + A +D+VSW
Sbjct: 308 ELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWT 367
Query: 500 VIIMAYAIHGLGKISIQLFSEMREKGIKPNESTFVSLLSSCSISGMVDEGWNYFDSMRKD 559
+I Y + L +I + M + +KP+E T ++LS+C+ G +D G +
Sbjct: 368 TMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVE-LHKLAIK 426
Query: 560 YGIVPGIEHYGCIIDLLGRIGNLDQAKRFIEEMPSAPTARIWGALLTASRKNNDIVSAEF 619
++ + +I++ + +D+A +P W +++ R NN A
Sbjct: 427 ARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVIS-WTSIIAGLRLNNRCFEALI 485
Query: 620 AARHVLSSAQDN 631
R + + Q N
Sbjct: 486 FLRQMKMTLQPN 497
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 489 bits (1259), Expect = e-137, Method: Compositional matrix adjust.
Identities = 259/734 (35%), Positives = 413/734 (56%), Gaps = 19/734 (2%)
Query: 82 GSMESACYLFEKMSYLDTYIWNVVIRGFVDNGLFQEAVEFHHRMVCEGFKADYFTYPFVI 141
G ++ A +F+++ WN+++ +G F ++ +M+ G + D +T+ V
Sbjct: 143 GDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVS 202
Query: 142 KACAGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPVRDTV 201
K+ + L + GE++HG + KSG V NSL+ Y+K V+ A ++FDEM RD +
Sbjct: 203 KSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVI 262
Query: 202 SWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKIGKEIHCQV 261
SWNS+I GY S G L F +M G+ D +++S + + +G+ +H
Sbjct: 263 SWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIG 322
Query: 262 IKSGLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVVNAHFLESF 321
+K+ + +L+DMY KCG +D A+ +F + R++V++ +M+ GY E+
Sbjct: 323 VKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAV 382
Query: 322 SCLRKMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGFLPNVALETALIDM 381
+M E++ ++PD T+ +L C + L EGK +H + ++ + AL+DM
Sbjct: 383 KLFEEM-EEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDM 441
Query: 382 YAGSGALKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMELFQDLWSEP-LKPDAMT 440
YA G+++ E +F M K+++SWN +I Y +N EA+ LF L E PD T
Sbjct: 442 YAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERT 501
Query: 441 FASILPAYAEIATLSDSMQIHSLITKLGLVSNIYISNSIVYMYAKCGDLQTA-------- 492
A +LPA A ++ +IH I + G S+ +++NS+V MYAKCG L A
Sbjct: 502 VACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIA 561
Query: 493 -RDVVSWNVIIMAYAIHGLGKISIQLFSEMREKGIKPNESTFVSLLSSCSISGMVDEGWN 551
+D+VSW V+I Y +HG GK +I LF++MR+ GI+ +E +FVSLL +CS SG+VDEGW
Sbjct: 562 SKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWR 621
Query: 552 YFDSMRKDYGIVPGIEHYGCIIDLLGRIGNLDQAKRFIEEMPSAPTARIWGALLTASRKN 611
+F+ MR + I P +EHY CI+D+L R G+L +A RFIE MP P A IWGALL R +
Sbjct: 622 FFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIH 681
Query: 612 NDIVSAEFAARHVLSSAQDNTGCYVLLSNMYAEAGRWEDVEQIKAIMEKEGLKKTTGCSM 671
+D+ AE A V +NTG YVL++N+YAEA +WE V++++ + + GL+K GCS
Sbjct: 682 HDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSW 741
Query: 672 FEKNGETHRFINQDRSHSKTYLIYNVLDILLRKIGEDFYIHNVSKFSPAHLMK----NRA 727
E G + F+ D S+ +T I + LRK+ S + L+ +
Sbjct: 742 IEIKGRVNIFVAGDSSNPETENI----EAFLRKVRARMIEEGYSPLTKYALIDAEEMEKE 797
Query: 728 KSPHHHSVRLAISFGLISTSVGNPVLVRNNTRICEDCHSAVKKISEITKRELIVRDPKCF 787
++ HS +LA++ G+IS+ G + V N R+C DCH K +S++T+RE+++RD F
Sbjct: 798 EALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRF 857
Query: 788 HHFRNGCCSCGDYW 801
H F++G CSC +W
Sbjct: 858 HQFKDGHCSCRGFW 871
Score = 245 bits (626), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 153/531 (28%), Positives = 268/531 (50%), Gaps = 17/531 (3%)
Query: 61 KKSIGPRNITKTRALQELVSSGSMESACYLFEKMSYLDTYIWNVVIRGFVDNGLFQEAVE 120
K G RN + + + ++SA +F++M+ D WN +I G+V NGL ++ +
Sbjct: 223 KSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLS 282
Query: 121 FHHRMVCEGFKADYFTYPFVIKACAGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYM 180
+M+ G + D T V CA +S G VH K+ + + CN+L+ MY
Sbjct: 283 VFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYS 342
Query: 181 KLGCVECAERMFDEMPVRDTVSWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLIS 240
K G ++ A+ +F EM R VS+ SMI GY G ++ F+EM+ G+ D +++ +
Sbjct: 343 KCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTA 402
Query: 241 ALGAISIEGCLKIGKEIHCQVIKSGLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRN 300
L + L GK +H + ++ L D+ V +L+DMY KCG + AE +F+ + ++
Sbjct: 403 VLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKD 462
Query: 301 IVAWNAMVGGYVVNAHFLESFSCLRKMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIH 360
I++WN ++GGY N + E+ S +LE+ +PD T+ +LP+C L A +G+ IH
Sbjct: 463 IISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIH 522
Query: 361 GYAIRKGFLPNVALETALIDMYAGSGALKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNR 420
GY +R G+ + + +L+DMYA GAL + LF + K+LVSW MIA Y +G +
Sbjct: 523 GYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGK 582
Query: 421 EAMELFQDLWSEPLKPDAMTFASILPAYAEIATLSDSMQIHSLIT-KLGLVSNIYISNSI 479
EA+ LF + ++ D ++F S+L A + + + + +++ + + + I
Sbjct: 583 EAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACI 642
Query: 480 VYMYAKCGDLQTAR----------DVVSWNVIIMAYAIHGLGKISIQLFSEMREKGIKPN 529
V M A+ GDL A D W ++ IH K++ ++ ++ E ++P
Sbjct: 643 VDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFE--LEPE 700
Query: 530 ESTFVSLLSSCSISGMVDEGWNYFDSMRKDYGIVPGIEHYGC-IIDLLGRI 579
+ + L+++ E W +RK G ++ GC I++ GR+
Sbjct: 701 NTGYYVLMANIYAEA---EKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRV 748
Score = 203 bits (517), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 129/459 (28%), Positives = 233/459 (50%), Gaps = 17/459 (3%)
Query: 103 NVVIRGFVDNGLFQEAVEFHHRMVCEGFKADY--FTYPFVIKACAGLLYLSEGEKVHGSL 160
N +R F ++G + AV +++C K D T V++ CA L +G++V +
Sbjct: 65 NTQLRRFCESGNLENAV----KLLCVSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFI 120
Query: 161 FKSGLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPVRDTVSWNSMIGGYCSVGDGVSSL 220
+G D + + L +MY G ++ A R+FDE+ + + WN ++ GD S+
Sbjct: 121 RGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSI 180
Query: 221 VFFKEMQNCGLRYDRFSLISALGAISIEGCLKIGKEIHCQVIKSGLEMDVMVQTSLVDMY 280
FK+M + G+ D ++ + S + G+++H ++KSG V SLV Y
Sbjct: 181 GLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFY 240
Query: 281 GKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVVNAHFLESFSCLRKMLEDDNLNPDCITI 340
K VD A ++F+ + R++++WN+++ GYV N + S +ML + D TI
Sbjct: 241 LKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLV-SGIEIDLATI 299
Query: 341 INLLPSCTKLGALLEGKSIHGYAIRKGFLPNVALETALIDMYAGSGALKMTEKLFGSMIE 400
+++ C + G+++H ++ F L+DMY+ G L + +F M +
Sbjct: 300 VSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSD 359
Query: 401 KNLVSWNAMIAAYVRNGQNREAMELFQDLWSEPLKPDAMTFASILPAYAEIATLSDSMQI 460
+++VS+ +MIA Y R G EA++LF+++ E + PD T ++L A L + ++
Sbjct: 360 RSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRV 419
Query: 461 HSLITKLGLVSNIYISNSIVYMYAKCGDLQTA---------RDVVSWNVIIMAYAIHGLG 511
H I + L +I++SN+++ MYAKCG +Q A +D++SWN II Y+ +
Sbjct: 420 HEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYA 479
Query: 512 KISIQLFS-EMREKGIKPNESTFVSLLSSCSISGMVDEG 549
++ LF+ + EK P+E T +L +C+ D+G
Sbjct: 480 NEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKG 518
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 471 bits (1211), Expect = e-131, Method: Compositional matrix adjust.
Identities = 278/837 (33%), Positives = 430/837 (51%), Gaps = 84/837 (10%)
Query: 40 FETNARSSKSTHIHKNQTITSKKSIGPR---------NITKTRALQELVSSGSMESACYL 90
F T+A IHK +TI+ K I + N+T + + +S G + A L
Sbjct: 23 FSTSAPEITPPFIHKCKTISQVKLIHQKLLSFGILTLNLT-SHLISTYISVGCLSHAVSL 81
Query: 91 FEKMSYLDT--YIWNVVIRGFVDNGLFQEAVEFHHRMVCEGFKADYFTYPFVIKACAGLL 148
+ D Y WN +IR + DNG + + M + D +T+PFV KAC +
Sbjct: 82 LRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEIS 141
Query: 149 YLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPVRDTVSWNSMIG 208
+ GE H +G S+V+V N+L+ MY + + A ++FDEM V D VSWNS+I
Sbjct: 142 SVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIE 201
Query: 209 GYCSVGDGVSSLVFFKEMQN-CGLRYDRFSLISALGAISIEGCLKIGKEIHCQVIKSGLE 267
Y +G +L F M N G R D +L++ L + G +GK++HC + S +
Sbjct: 202 SYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMI 261
Query: 268 MDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVVNAHFLESFSCLRKM 327
++ V LVDMY KCG++D A +F+ + +++V+WNAMV GY F ++ KM
Sbjct: 262 QNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKM 321
Query: 328 LED----------------------------------DNLNPDCITIINLLPSCTKLGAL 353
E+ + P+ +T+I++L C +GAL
Sbjct: 322 QEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGAL 381
Query: 354 LEGKSIHGYAIR-------KGFLPNVALETALIDMYAGSGALKMTEKLFGSMI--EKNLV 404
+ GK IH YAI+ G + LIDMYA + +F S+ E+++V
Sbjct: 382 MHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVV 441
Query: 405 SWNAMIAAYVRNGQNREAMELFQDLWSE--PLKPDAMTFASILPAYAEIATLSDSMQIHS 462
+W MI Y ++G +A+EL +++ E +P+A T + L A A +A L QIH+
Sbjct: 442 TWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHA 501
Query: 463 --LITKLGLVSNIYISNSIVYMYAKCGDLQTARDV---------VSWNVIIMAYAIHGLG 511
L + V +++SN ++ MYAKCG + AR V V+W ++ Y +HG G
Sbjct: 502 YALRNQQNAVP-LFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYG 560
Query: 512 KISIQLFSEMREKGIKPNESTFVSLLSSCSISGMVDEGWNYFDSMRKDYGIVPGIEHYGC 571
+ ++ +F EMR G K + T + +L +CS SGM+D+G YF+ M+ +G+ PG EHY C
Sbjct: 561 EEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYAC 620
Query: 572 IIDLLGRIGNLDQAKRFIEEMPSAPTARIWGALLTASRKNNDIVSAEFAARHVLSSAQDN 631
++DLLGR G L+ A R IEEMP P +W A L+ R + + E+AA + A ++
Sbjct: 621 LVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNH 680
Query: 632 TGCYVLLSNMYAEAGRWEDVEQIKAIMEKEGLKKTTGCSMFEKNGETHRFINQDRSHSKT 691
G Y LLSN+YA AGRW+DV +I+++M +G+KK GCS E T F D++H
Sbjct: 681 DGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHA 740
Query: 692 YLIYNVLDILLRKIGE-------DFYIHNVSKFSPAHLMKNRAKSPHHHSVRLAISFGLI 744
IY VL +++I + F +H+V L+ HS +LA+++G++
Sbjct: 741 KEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLL-------FEHSEKLALAYGIL 793
Query: 745 STSVGNPVLVRNNTRICEDCHSAVKKISEITKRELIVRDPKCFHHFRNGCCSCGDYW 801
+T G + + N R+C DCH+A +S I ++I+RD FHHF+NG CSC YW
Sbjct: 794 TTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 469 bits (1208), Expect = e-131, Method: Compositional matrix adjust.
Identities = 260/753 (34%), Positives = 424/753 (56%), Gaps = 42/753 (5%)
Query: 82 GSMESACYLFEKMSYLDTYIWNVVIRGFVDNGLFQEAVEFHHRMVCEGFKADYFTYPFVI 141
G + +F+++S + WN +I ++ A+E M+ E + FT V+
Sbjct: 147 GDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVV 206
Query: 142 KACAGLLY---LSEGEKVHG-SLFKSGLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPV 197
AC+ L L G++VH L K LNS ++ N+L+ MY KLG + ++ +
Sbjct: 207 TACSNLPMPEGLMMGKQVHAYGLRKGELNS--FIINTLVAMYGKLGKLASSKVLLGSFGG 264
Query: 198 RDTVSWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKIGKEI 257
RD V+WN+++ C + +L + +EM G+ D F++ S L A S L+ GKE+
Sbjct: 265 RDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKEL 324
Query: 258 HCQVIKSG-LEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVVNAH 316
H +K+G L+ + V ++LVDMY C V R+F+ +F R I WNAM+ GY N H
Sbjct: 325 HAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEH 384
Query: 317 FLESFSCLRKMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGFLPNVALET 376
E+ M E L + T+ ++P+C + GA ++IHG+ +++G + ++
Sbjct: 385 DKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQN 444
Query: 377 ALIDMYAGSGALKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMELFQDLWS----- 431
L+DMY+ G + + ++FG M +++LV+WN MI YV + + +A+ L + +
Sbjct: 445 TLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKV 504
Query: 432 ------EPLKPDAMTFASILPAYAEIATLSDSMQIHSLITKLGLVSNIYISNSIVYMYAK 485
LKP+++T +ILP+ A ++ L+ +IH+ K L +++ + +++V MYAK
Sbjct: 505 SKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAK 564
Query: 486 CGDLQTAR---------DVVSWNVIIMAYAIHGLGKISIQLFSEMREKGIKPNESTFVSL 536
CG LQ +R +V++WNVIIMAY +HG G+ +I L M +G+KPNE TF+S+
Sbjct: 565 CGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISV 624
Query: 537 LSSCSISGMVDEGWNYFDSMRKDYGIVPGIEHYGCIIDLLGRIGNLDQAKRFIEEMPSA- 595
++CS SGMVDEG F M+ DYG+ P +HY C++DLLGR G + +A + + MP
Sbjct: 625 FAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDF 684
Query: 596 PTARIWGALLTASRKNNDIVSAEFAARHVLSSAQDNTGCYVLLSNMYAEAGRWEDVEQIK 655
A W +LL ASR +N++ E AA++++ + YVLL+N+Y+ AG W+ +++
Sbjct: 685 NKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVR 744
Query: 656 AIMEKEGLKKTTGCSMFEKNGETHRFINQDRSHSKTYLIYNVLDILLRKIGEDFYI---- 711
M+++G++K GCS E E H+F+ D SH ++ + L+ L ++ ++ Y+
Sbjct: 745 RNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTS 804
Query: 712 ---HNVSKFSPAHLMKNRAKSPHHHSVRLAISFGLISTSVGNPVLVRNNTRICEDCHSAV 768
HNV + L+ HS +LAI+FG+++TS G + V N R+C DCH A
Sbjct: 805 CVLHNVEEDEKEILLCG-------HSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLAT 857
Query: 769 KKISEITKRELIVRDPKCFHHFRNGCCSCGDYW 801
K IS+I RE+I+RD + FH F+NG CSCGDYW
Sbjct: 858 KFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 229 bits (583), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 154/550 (28%), Positives = 278/550 (50%), Gaps = 32/550 (5%)
Query: 70 TKTRALQELVSSGSMESACYLFEKMSYLDTYIWNVVIRGFVDNGLFQEAVEFHHRMVCEG 129
T T A +++ S+ S + ++ + S W ++R V + L +EAV + M+ G
Sbjct: 36 TPTSATEDVASAVSGAPSIFISQSRS---PEWWIDLLRSKVRSNLLREAVLTYVDMIVLG 92
Query: 130 FKADYFTYPFVIKACAGLLYLSEGEKVHGSLFKSGLNSD-VYVCNSLIVMYMKLGCVECA 188
K D + +P ++KA A L + G+++H ++K G D V V N+L+ +Y K G
Sbjct: 93 IKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAV 152
Query: 189 ERMFDEMPVRDTVSWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAIS-- 246
++FD + R+ VSWNS+I CS +L F+ M + + F+L+S + A S
Sbjct: 153 YKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNL 212
Query: 247 -IEGCLKIGKEIHCQVIKSGLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWN 305
+ L +GK++H ++ G E++ + +LV MYGK G + ++ L R++V WN
Sbjct: 213 PMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWN 271
Query: 306 AMVGGYVVNAHFLESFSCLRKMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIR 365
++ N LE+ LR+M+ + + PD TI ++LP+C+ L L GK +H YA++
Sbjct: 272 TVLSSLCQNEQLLEALEYLREMVL-EGVEPDEFTISSVLPACSHLEMLRTGKELHAYALK 330
Query: 366 KGFL-PNVALETALIDMYAGSGALKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAME 424
G L N + +AL+DMY + ++F M ++ + WNAMIA Y +N ++EA+
Sbjct: 331 NGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALL 390
Query: 425 LFQDL-WSEPLKPDAMTFASILPAYAEIATLSDSMQIHSLITKLGLVSNIYISNSIVYMY 483
LF + S L ++ T A ++PA S IH + K GL + ++ N+++ MY
Sbjct: 391 LFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMY 450
Query: 484 AKCGDLQTA---------RDVVSWNVIIMAYAIHGLGKISIQLFSEMR------EKG--- 525
++ G + A RD+V+WN +I Y + ++ L +M+ KG
Sbjct: 451 SRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASR 510
Query: 526 --IKPNESTFVSLLSSCSISGMVDEGWNYFDSMRKDYGIVPGIEHYGCIIDLLGRIGNLD 583
+KPN T +++L SC+ + +G K+ + + ++D+ + G L
Sbjct: 511 VSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKN-NLATDVAVGSALVDMYAKCGCLQ 569
Query: 584 QAKRFIEEMP 593
+++ +++P
Sbjct: 570 MSRKVFDQIP 579
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis
thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 451 bits (1159), Expect = e-125, Method: Compositional matrix adjust.
Identities = 245/731 (33%), Positives = 402/731 (54%), Gaps = 14/731 (1%)
Query: 82 GSMESACYLFEKMSYLDTYIWNVVIRGFVDNGLFQEAVEFHHRMVCEGFKADYFTYPFVI 141
G++ SA ++F MS D +N +I G G ++A+E RM +G + D T ++
Sbjct: 337 GNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLV 396
Query: 142 KACAGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPVRDTV 201
AC+ L G+++H K G S+ + +L+ +Y K +E A F E V + V
Sbjct: 397 VACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVV 456
Query: 202 SWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKIGKEIHCQV 261
WN M+ Y + D +S F++MQ + ++++ S L G L++G++IH Q+
Sbjct: 457 LWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQI 516
Query: 262 IKSGLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVVNAHFLESF 321
IK+ +++ V + L+DMY K G +D A + +++V+W M+ GY ++
Sbjct: 517 IKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKAL 576
Query: 322 SCLRKMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGFLPNVALETALIDM 381
+ R+ML D + D + + N + +C L AL EG+ IH A GF ++ + AL+ +
Sbjct: 577 TTFRQML-DRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTL 635
Query: 382 YAGSGALKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMELFQDLWSEPLKPDAMTF 441
Y+ G ++ + F + ++WNA+++ + ++G N EA+ +F + E + + TF
Sbjct: 636 YSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTF 695
Query: 442 ASILPAYAEIATLSDSMQIHSLITKLGLVSNIYISNSIVYMYAKCGDLQTA--------- 492
S + A +E A + Q+H++ITK G S + N+++ MYAKCG + A
Sbjct: 696 GSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVST 755
Query: 493 RDVVSWNVIIMAYAIHGLGKISIQLFSEMREKGIKPNESTFVSLLSSCSISGMVDEGWNY 552
++ VSWN II AY+ HG G ++ F +M ++PN T V +LS+CS G+VD+G Y
Sbjct: 756 KNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAY 815
Query: 553 FDSMRKDYGIVPGIEHYGCIIDLLGRIGNLDQAKRFIEEMPSAPTARIWGALLTASRKNN 612
F+SM +YG+ P EHY C++D+L R G L +AK FI+EMP P A +W LL+A +
Sbjct: 816 FESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHK 875
Query: 613 DIVSAEFAARHVLSSAQDNTGCYVLLSNMYAEAGRWEDVEQIKAIMEKEGLKKTTGCSMF 672
++ EFAA H+L +++ YVLLSN+YA + +W+ + + M+++G+KK G S
Sbjct: 876 NMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWI 935
Query: 673 EKNGETHRFINQDRSHSKTYLIYNVLDILLRKIGEDFYIHNVSKFSPAHLMKNRAKSP-- 730
E H F D++H I+ L ++ E Y+ + FS + +++ K P
Sbjct: 936 EVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDC--FSLLNELQHEQKDPII 993
Query: 731 HHHSVRLAISFGLISTSVGNPVLVRNNTRICEDCHSAVKKISEITKRELIVRDPKCFHHF 790
HS +LAISFGL+S P+ V N R+C DCH+ +K +S+++ RE+IVRD FHHF
Sbjct: 994 FIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHF 1053
Query: 791 RNGCCSCGDYW 801
G CSC DYW
Sbjct: 1054 EGGACSCKDYW 1064
Score = 232 bits (591), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 150/541 (27%), Positives = 261/541 (48%), Gaps = 14/541 (2%)
Query: 81 SGSMESACYLFEKMSYLDTYIWNVVIRGFVDNGLFQEAVEFHHRMVCEGFKADYFTYPFV 140
+G ++ A +F+ + D W +I G N EA+ M G + + V
Sbjct: 235 NGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSV 294
Query: 141 IKACAGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPVRDT 200
+ AC + L GE++HG + K G +SD YVCN+L+ +Y LG + AE +F M RD
Sbjct: 295 LSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDA 354
Query: 201 VSWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKIGKEIHCQ 260
V++N++I G G G ++ FK M GL D +L S + A S +G L G+++H
Sbjct: 355 VTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAY 414
Query: 261 VIKSGLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVVNAHFLES 320
K G + ++ +L+++Y KC ++ A F N+V WN M+ Y + S
Sbjct: 415 TTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNS 474
Query: 321 FSCLRKMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGFLPNVALETALID 380
F R+M + + + P+ T ++L +C +LG L G+ IH I+ F N + + LID
Sbjct: 475 FRIFRQM-QIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLID 533
Query: 381 MYAGSGALKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMELFQDLWSEPLKPDAMT 440
MYA G L + K++VSW MIA Y + + +A+ F+ + ++ D +
Sbjct: 534 MYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVG 593
Query: 441 FASILPAYAEIATLSDSMQIHSLITKLGLVSNIYISNSIVYMYAKCGDLQ---------T 491
+ + A A + L + QIH+ G S++ N++V +Y++CG ++
Sbjct: 594 LTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTE 653
Query: 492 ARDVVSWNVIIMAYAIHGLGKISIQLFSEMREKGIKPNESTFVSLLSSCSISGMVDEGWN 551
A D ++WN ++ + G + ++++F M +GI N TF S + + S + + +G
Sbjct: 654 AGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQ 713
Query: 552 YFDSMRKDYGIVPGIEHYGCIIDLLGRIGNL-DQAKRFIEEMPSAPTARIWGALLTASRK 610
+ K G E +I + + G++ D K+F+E S W A++ A K
Sbjct: 714 VHAVITKT-GYDSETEVCNALISMYAKCGSISDAEKQFLE--VSTKNEVSWNAIINAYSK 770
Query: 611 N 611
+
Sbjct: 771 H 771
Score = 223 bits (569), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 159/611 (26%), Positives = 276/611 (45%), Gaps = 19/611 (3%)
Query: 82 GSMESACYLFEKMSYLDTYIWNVVIRGFVDNGLFQEAVEFHHRMVCEGFKADYFTYPFVI 141
G + A +F++M + WN +I+ L E RMV E + T+ V+
Sbjct: 134 GDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVL 193
Query: 142 KAC-AGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPVRDT 200
+AC G + E++H + GL VCN LI +Y + G V+ A R+FD + ++D
Sbjct: 194 EACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDH 253
Query: 201 VSWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKIGKEIHCQ 260
SW +MI G ++ F +M G+ ++ S L A L+IG+++H
Sbjct: 254 SSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGL 313
Query: 261 VIKSGLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVVNAHFLES 320
V+K G D V +LV +Y G + AE +F+ + R+ V +N ++ G + + E
Sbjct: 314 VLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLING-LSQCGYGEK 372
Query: 321 FSCLRKMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGFLPNVALETALID 380
L K + D L PD T+ +L+ +C+ G L G+ +H Y + GF N +E AL++
Sbjct: 373 AMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLN 432
Query: 381 MYAGSGALKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMELFQDLWSEPLKPDAMT 440
+YA ++ F +N+V WN M+ AY R + +F+ + E + P+ T
Sbjct: 433 LYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYT 492
Query: 441 FASILPAYAEIATLSDSMQIHSLITKLGLVSNIYISNSIVYMYAKCGDLQTA-------- 492
+ SIL + L QIHS I K N Y+ + ++ MYAK G L TA
Sbjct: 493 YPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFA 552
Query: 493 -RDVVSWNVIIMAYAIHGLGKISIQLFSEMREKGIKPNESTFVSLLSSCSISGMVDEGWN 551
+DVVSW +I Y + ++ F +M ++GI+ +E + +S+C+ + EG
Sbjct: 553 GKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEG-Q 611
Query: 552 YFDSMRKDYGIVPGIEHYGCIIDLLGRIGNLDQAKRFIEEMPSAPTARIWGALLTASRKN 611
+ G + ++ L R G ++++ E+ + W AL++ +++
Sbjct: 612 QIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNI-AWNALVSGFQQS 670
Query: 612 -NDIVSAEFAARHVLSSAQDNTGCYVLLSNMYAEAGRWEDVEQIKAIMEKEGLKKTTGC- 669
N+ + R +N + +E + +Q+ A++ K G T
Sbjct: 671 GNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVC 730
Query: 670 ----SMFEKNG 676
SM+ K G
Sbjct: 731 NALISMYAKCG 741
Score = 195 bits (496), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 142/542 (26%), Positives = 248/542 (45%), Gaps = 24/542 (4%)
Query: 32 PETNPTPSFETNARSSKSTHIHKNQ--TITSKKSIGPRNITKTRALQELVSSGSMESACY 89
P++N S A S+ T Q T+K N + L +E+A
Sbjct: 387 PDSNTLASLVV-ACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALD 445
Query: 90 LFEKMSYLDTYIWNV--VIRGFVDNGLFQEAVEFHHRMVCEGFKADYFTYPFVIKACAGL 147
F + + +WNV V G +D+ + + +M E + +TYP ++K C L
Sbjct: 446 YFLETEVENVVLWNVMLVAYGLLDD--LRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRL 503
Query: 148 LYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPVRDTVSWNSMI 207
L GE++H + K+ + YVC+ LI MY KLG ++ A + +D VSW +MI
Sbjct: 504 GDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMI 563
Query: 208 GGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKIGKEIHCQVIKSGLE 267
GY +L F++M + G+R D L +A+ A + LK G++IH Q SG
Sbjct: 564 AGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFS 623
Query: 268 MDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVVNAHFLESFSCLRKM 327
D+ Q +LV +Y +CG ++ + F + +AWNA+V G+ + + E+ +M
Sbjct: 624 SDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRM 683
Query: 328 LEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGFLPNVALETALIDMYAGSGA 387
+ ++ + T + + + ++ + +GK +H + G+ + ALI MYA G+
Sbjct: 684 -NREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGS 742
Query: 388 LKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMELFQDLWSEPLKPDAMTFASILPA 447
+ EK F + KN VSWNA+I AY ++G EA++ F + ++P+ +T +L A
Sbjct: 743 ISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSA 802
Query: 448 YAEIATLSDSMQ-IHSLITKLGLVSNIYISNSIVYMYAKCGDLQTAR----------DVV 496
+ I + + S+ ++ GL +V M + G L A+ D +
Sbjct: 803 CSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDAL 862
Query: 497 SWNVIIMAYAIHGLGKISIQLFSEMREKGIKPNESTFVSLLSSCSISGMVDEGWNYFDSM 556
W ++ A +H + I F+ ++P +S LLS+ V + W+ D
Sbjct: 863 VWRTLLSACVVH--KNMEIGEFAAHHLLELEPEDSATYVLLSNLY---AVSKKWDARDLT 917
Query: 557 RK 558
R+
Sbjct: 918 RQ 919
Score = 192 bits (489), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 137/473 (28%), Positives = 240/473 (50%), Gaps = 23/473 (4%)
Query: 129 GFKADYFTYPFVIKACAGLL-YLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVEC 187
G + ++ T ++++ C L EG K+H + K GL+S+ + L Y+ G +
Sbjct: 79 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 138
Query: 188 AERMFDEMPVRDTVSWNSMIGGYCS---VGDGVSSLVFFKEMQNCGLRYDRFS-LISALG 243
A ++FDEMP R +WN MI S +G+ V L +N FS ++ A
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGE-VFGLFVRMVSENVTPNEGTFSGVLEACR 197
Query: 244 AISIEGCLKIGKEIHCQVIKSGLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVA 303
S+ + ++IH +++ GL +V L+D+Y + G VD A R+F+ + ++ +
Sbjct: 198 GGSV--AFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSS 255
Query: 304 WNAMVGGYVVNAHFLESFSCLRKMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYA 363
W AM+ G N E+ M + P ++L +C K+ +L G+ +HG
Sbjct: 256 WVAMISGLSKNECEAEAIRLFCDMYV-LGIMPTPYAFSSVLSACKKIESLEIGEQLHGLV 314
Query: 364 IRKGFLPNVALETALIDMYAGSGALKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAM 423
++ GF + + AL+ +Y G L E +F +M +++ V++N +I + G +AM
Sbjct: 315 LKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAM 374
Query: 424 ELFQDLWSEPLKPDAMTFASILPAYAEIATLSDSMQIHSLITKLGLVSNIYISNSIVYMY 483
ELF+ + + L+PD+ T AS++ A + TL Q+H+ TKLG SN I +++ +Y
Sbjct: 375 ELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLY 434
Query: 484 AKCGDLQTARD---------VVSWNVIIMAYAIHGLGKISIQLFSEMREKGIKPNESTFV 534
AKC D++TA D VV WNV+++AY + + S ++F +M+ + I PN+ T+
Sbjct: 435 AKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYP 494
Query: 535 SLLSSCSISGMVDEGWNYFDSMRKDYGIVPGIEHYGC--IIDLLGRIGNLDQA 585
S+L +C G ++ G + K + Y C +ID+ ++G LD A
Sbjct: 495 SILKTCIRLGDLELGEQIHSQIIKTNF---QLNAYVCSVLIDMYAKLGKLDTA 544
Score = 89.7 bits (221), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 108/234 (46%), Gaps = 12/234 (5%)
Query: 319 ESFSCLR-KMLEDDNLNPDCITIINLLPSCTKL-GALLEGKSIHGYAIRKGFLPNVALET 376
ESF R +E+ + P+ T+ LL C K G+L EG+ +H ++ G N L
Sbjct: 65 ESFQEKRIDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSE 124
Query: 377 ALIDMYAGSGALKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMELFQDLWSEPLKP 436
L D Y G L K+F M E+ + +WN MI E LF + SE + P
Sbjct: 125 KLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTP 184
Query: 437 DAMTFASILPAYAEIATLSDSM-QIHSLITKLGLVSNIYISNSIVYMYAKCGDLQTARDV 495
+ TF+ +L A + D + QIH+ I GL + + N ++ +Y++ G + AR V
Sbjct: 185 NEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRV 244
Query: 496 V---------SWNVIIMAYAIHGLGKISIQLFSEMREKGIKPNESTFVSLLSSC 540
SW +I + + +I+LF +M GI P F S+LS+C
Sbjct: 245 FDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSAC 298
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 444 bits (1142), Expect = e-123, Method: Compositional matrix adjust.
Identities = 256/749 (34%), Positives = 397/749 (53%), Gaps = 31/749 (4%)
Query: 72 TRALQELVSSGSMESACYLFEKMSYLDTYIWNVVIRGF-VDNGLFQEAVEFHHRMVCEGF 130
T+ Q L G++ A +F + D +++NV++RGF V+ F H
Sbjct: 56 TKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDL 115
Query: 131 KADYFTYPFVIKACAGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAER 190
K + TY F I A +G G +HG G +S++ + ++++ MY K VE A +
Sbjct: 116 KPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARK 175
Query: 191 MFDEMPVRDTVSWNSMIGGYCSVGDGVSSLVFFKEMQNCG-LRYDRFSLISALGAISIEG 249
+FD MP +DT+ WN+MI GY V S+ F+++ N R D +L+ L A++
Sbjct: 176 VFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQ 235
Query: 250 CLKIGKEIHCQVIKSGLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVG 309
L++G +IH K+G V T + +Y KCG + LF +IVA+NAM+
Sbjct: 236 ELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIH 295
Query: 310 GYVVNAHFLESFSCLRK-MLEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGF 368
GY N S S ++ ML L T+++L+P G L+ +IHGY ++ F
Sbjct: 296 GYTSNGETELSLSLFKELMLSGARLRSS--TLVSLVPVS---GHLMLIYAIHGYCLKSNF 350
Query: 369 LPNVALETALIDMYAGSGALKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMELFQD 428
L + ++ TAL +Y+ ++ KLF EK+L SWNAMI+ Y +NG +A+ LF++
Sbjct: 351 LSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFRE 410
Query: 429 LWSEPLKPDAMTFASILPAYAEIATLSDSMQIHSLITKLGLVSNIYISNSIVYMYAKCG- 487
+ P+ +T IL A A++ LS +H L+ S+IY+S +++ MYAKCG
Sbjct: 411 MQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGS 470
Query: 488 --------DLQTARDVVSWNVIIMAYAIHGLGKISIQLFSEMREKGIKPNESTFVSLLSS 539
DL T ++ V+WN +I Y +HG G+ ++ +F EM GI P TF+ +L +
Sbjct: 471 IAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYA 530
Query: 540 CSISGMVDEGWNYFDSMRKDYGIVPGIEHYGCIIDLLGRIGNLDQAKRFIEEMPSAPTAR 599
CS +G+V EG F+SM YG P ++HY C++D+LGR G+L +A +FIE M P +
Sbjct: 531 CSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSS 590
Query: 600 IWGALLTASRKNNDIVSAEFAARHVLSSAQDNTGCYVLLSNMYAEAGRWEDVEQIKAIME 659
+W LL A R + D A + + DN G +VLLSN+++ + ++ +
Sbjct: 591 VWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAK 650
Query: 660 KEGLKKTTGCSMFEKNGETHRFINQDRSHSKTYLIYNVLDILLRKIGEDFY-------IH 712
K L K G ++ E H F + D+SH + IY L+ L K+ E Y +H
Sbjct: 651 KRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALH 710
Query: 713 NVSKFSPAHLMKNRAKSPHHHSVRLAISFGLISTSVGNPVLVRNNTRICEDCHSAVKKIS 772
+V + ++K HS RLAI+FGLI+T G + + N R+C DCH+ K IS
Sbjct: 711 DVEEEERELMVKV-------HSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLIS 763
Query: 773 EITKRELIVRDPKCFHHFRNGCCSCGDYW 801
+IT+R ++VRD FHHF++G CSCGDYW
Sbjct: 764 KITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 140 bits (354), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 144/292 (49%), Gaps = 10/292 (3%)
Query: 256 EIHCQVIKSGLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVVNA 315
+ H Q+I G D+ + T L G + YA +F + ++ +N ++ G+ VN
Sbjct: 38 QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97
Query: 316 HFLESFSCLRKMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGFLPNVALE 375
S S + + +L P+ T + + + G+ IHG A+ G + L
Sbjct: 98 SPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLG 157
Query: 376 TALIDMYAGSGALKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMELFQDLWSEP-L 434
+ ++ MY ++ K+F M EK+ + WN MI+ Y +N E++++F+DL +E
Sbjct: 158 SNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCT 217
Query: 435 KPDAMTFASILPAYAEIATLSDSMQIHSLITKLGLVSNIYISNSIVYMYAKCGDLQTAR- 493
+ D T ILPA AE+ L MQIHSL TK G S+ Y+ + +Y+KCG ++
Sbjct: 218 RLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSA 277
Query: 494 --------DVVSWNVIIMAYAIHGLGKISIQLFSEMREKGIKPNESTFVSLL 537
D+V++N +I Y +G ++S+ LF E+ G + ST VSL+
Sbjct: 278 LFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLV 329
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 442 bits (1138), Expect = e-123, Method: Compositional matrix adjust.
Identities = 255/760 (33%), Positives = 410/760 (53%), Gaps = 24/760 (3%)
Query: 64 IGPRNITKTRALQELVSSGSMESACYLFEKMSYL---DTYIWNVVIRGFVDNGLFQEAVE 120
I P ++ + SG A +FE M D W+ ++ + +NG +A++
Sbjct: 93 IEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIK 152
Query: 121 FHHRMVCEGFKADYFTYPFVIKACAGLLYLSEGEKVHGSLFKSG-LNSDVYVCNSLIVMY 179
+ G + + Y VI+AC+ ++ G G L K+G SDV V SLI M+
Sbjct: 153 VFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMF 212
Query: 180 MK-LGCVECAERMFDEMPVRDTVSWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSL 238
+K E A ++FD+M + V+W MI +G ++ FF +M G D+F+L
Sbjct: 213 VKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTL 272
Query: 239 ISALGAISIEGCLKIGKEIHCQVIKSGLEMDVMVQTSLVDMYGKC---GVVDYAERLFNM 295
S A + L +GK++H I+SGL DV + SLVDMY KC G VD ++F+
Sbjct: 273 SSVFSACAELENLSLGKQLHSWAIRSGLVDDV--ECSLVDMYAKCSADGSVDDCRKVFDR 330
Query: 296 IFPRNIVAWNAMVGGYVVNAHF-LESFSCLRKMLEDDNLNPDCITIINLLPSCTKLGALL 354
+ ++++W A++ GY+ N + E+ + +M+ ++ P+ T + +C L
Sbjct: 331 MEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPR 390
Query: 355 EGKSIHGYAIRKGFLPNVALETALIDMYAGSGALKMTEKLFGSMIEKNLVSWNAMIAAYV 414
GK + G A ++G N ++ ++I M+ S ++ ++ F S+ EKNLVS+N +
Sbjct: 391 VGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTC 450
Query: 415 RNGQNREAMELFQDLWSEPLKPDAMTFASILPAYAEIATLSDSMQIHSLITKLGLVSNIY 474
RN +A +L ++ L A TFAS+L A + ++ QIHS + KLGL N
Sbjct: 451 RNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQP 510
Query: 475 ISNSIVYMYAKCGDLQTA---------RDVVSWNVIIMAYAIHGLGKISIQLFSEMREKG 525
+ N+++ MY+KCG + TA R+V+SW +I +A HG ++ F++M E+G
Sbjct: 511 VCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEG 570
Query: 526 IKPNESTFVSLLSSCSISGMVDEGWNYFDSMRKDYGIVPGIEHYGCIIDLLGRIGNLDQA 585
+KPNE T+V++LS+CS G+V EGW +F+SM +D+ I P +EHY C++DLL R G L A
Sbjct: 571 VKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDA 630
Query: 586 KRFIEEMPSAPTARIWGALLTASRKNNDIVSAEFAARHVLSSAQDNTGCYVLLSNMYAEA 645
FI MP +W L A R +++ + AAR +L + Y+ LSN+YA A
Sbjct: 631 FEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACA 690
Query: 646 GRWEDVEQIKAIMEKEGLKKTTGCSMFEKNGETHRFINQDRSHSKTYLIYNVLDILLRKI 705
G+WE+ +++ M++ L K GCS E + H+F D +H + IY+ LD L+ +I
Sbjct: 691 GKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEI 750
Query: 706 GEDFYIHNVS----KFSPAHLMKNRAKSPHHHSVRLAISFGLISTSVGNPVLVRNNTRIC 761
Y+ + K + + + + HS ++A++FGLISTS PV V N R+C
Sbjct: 751 KRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVC 810
Query: 762 EDCHSAVKKISEITKRELIVRDPKCFHHFRNGCCSCGDYW 801
DCH+A+K IS ++ RE+++RD FHHF++G CSC DYW
Sbjct: 811 GDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 154 bits (388), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 134/522 (25%), Positives = 247/522 (47%), Gaps = 25/522 (4%)
Query: 110 VDNGLFQEAVEFHHRMVCEGFKA-DYFTYPFVIKACAGLLYLSEGEKVHGSLFKSGLNSD 168
++ G + AV M +G + D T+ ++K+C G+ VH L + + D
Sbjct: 37 LNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPD 96
Query: 169 VYVCNSLIVMYMKLGCVECAERMFDEMP---VRDTVSWNSMIGGYCSVGDGVSSLVFFKE 225
+ NSLI +Y K G AE +F+ M RD VSW++M+ Y + G + ++ F E
Sbjct: 97 SVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVE 156
Query: 226 MQNCGLRYDRFSLISALGAISIEGCLKIGKEIHCQVIKSG-LEMDVMVQTSLVDMYGKC- 283
GL + + + + A S + +G+ ++K+G E DV V SL+DM+ K
Sbjct: 157 FLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGE 216
Query: 284 GVVDYAERLFNMIFPRNIVAWNAMVGGYVVNAHFLESFSCLRKMLEDDNLNPDCITIINL 343
+ A ++F+ + N+V W M+ + E+ M+ D T+ ++
Sbjct: 217 NSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVL-SGFESDKFTLSSV 275
Query: 344 LPSCTKLGALLEGKSIHGYAIRKGFLPNVALETALIDMYA---GSGALKMTEKLFGSMIE 400
+C +L L GK +H +AIR G + +V E +L+DMYA G++ K+F M +
Sbjct: 276 FSACAELENLSLGKQLHSWAIRSGLVDDV--ECSLVDMYAKCSADGSVDDCRKVFDRMED 333
Query: 401 KNLVSWNAMIAAYVRN-GQNREAMELFQDLWSEP-LKPDAMTFASILPAYAEIATLSDSM 458
+++SW A+I Y++N EA+ LF ++ ++ ++P+ TF+S A ++
Sbjct: 334 HSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGK 393
Query: 459 QIHSLITKLGLVSNIYISNSIVYMYAKCGDLQTA---------RDVVSWNVIIMAYAIHG 509
Q+ K GL SN ++NS++ M+ K ++ A +++VS+N + +
Sbjct: 394 QVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNL 453
Query: 510 LGKISIQLFSEMREKGIKPNESTFVSLLSSCSISGMVDEGWNYFDSMRKDYGIVPGIEHY 569
+ + +L SE+ E+ + + TF SLLS + G + +G + K G+
Sbjct: 454 NFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVK-LGLSCNQPVC 512
Query: 570 GCIIDLLGRIGNLDQAKRFIEEMPSAPTARIWGALLTASRKN 611
+I + + G++D A R M + W +++T K+
Sbjct: 513 NALISMYSKCGSIDTASRVFNFMENRNVIS-WTSMITGFAKH 553
Score = 97.8 bits (242), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 128/277 (46%), Gaps = 2/277 (0%)
Query: 61 KKSIGPRNITKTRALQELVSSGSMESACYLFEKMSYLDTYIWNVVIRGFVDNGLFQEAVE 120
K+ + + + V S ME A FE +S + +N + G N F++A +
Sbjct: 401 KRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFK 460
Query: 121 FHHRMVCEGFKADYFTYPFVIKACAGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYM 180
+ FT+ ++ A + + +GE++H + K GL+ + VCN+LI MY
Sbjct: 461 LLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYS 520
Query: 181 KLGCVECAERMFDEMPVRDTVSWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLIS 240
K G ++ A R+F+ M R+ +SW SMI G+ G + L F +M G++ + + ++
Sbjct: 521 KCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVA 580
Query: 241 ALGAISIEGCLKIG-KEIHCQVIKSGLEMDVMVQTSLVDMYGKCGVV-DYAERLFNMIFP 298
L A S G + G + + ++ + +VD+ + G++ D E + M F
Sbjct: 581 ILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQ 640
Query: 299 RNIVAWNAMVGGYVVNAHFLESFSCLRKMLEDDNLNP 335
+++ W +G V+++ RK+LE D P
Sbjct: 641 ADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEP 677
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 141/308 (45%), Gaps = 22/308 (7%)
Query: 327 MLEDDNLNP-DCITIINLLPSCTKLGALLEGKSIHGYAIRKGFLPNVALETALIDMYAGS 385
++ D + P D +T +LL SC + GK +H I P+ L +LI +Y+ S
Sbjct: 51 LMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKS 110
Query: 386 GALKMTEKLFGSMI---EKNLVSWNAMIAAYVRNGQNREAMELFQDLWSEPLKPDAMTFA 442
G E +F +M ++++VSW+AM+A Y NG+ +A+++F + L P+ +
Sbjct: 111 GDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYT 170
Query: 443 SILPAYAEIATLSDSMQIHSLITKLG-LVSNIYISNSIVYMYA----------KCGDLQT 491
+++ A + + + K G S++ + S++ M+ K D +
Sbjct: 171 AVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMS 230
Query: 492 ARDVVSWNVIIMAYAIHGLGKISIQLFSEMREKGIKPNESTFVSLLSSCSISGMVDEGWN 551
+VV+W ++I G + +I+ F +M G + ++ T S+ S+C+ + G
Sbjct: 231 ELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLG-K 289
Query: 552 YFDSMRKDYGIVPGIEHYGCIIDLLGRI---GNLDQAKRFIEEMPSAPTARIWGALLTAS 608
S G+V +E ++D+ + G++D ++ + M W AL+T
Sbjct: 290 QLHSWAIRSGLVDDVE--CSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMS-WTALITGY 346
Query: 609 RKNNDIVS 616
KN ++ +
Sbjct: 347 MKNCNLAT 354
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 441 bits (1135), Expect = e-123, Method: Compositional matrix adjust.
Identities = 269/814 (33%), Positives = 431/814 (52%), Gaps = 49/814 (6%)
Query: 34 TNPTPSFETNARSSKSTHIHKNQTITSKKSIGPRNITKTRALQ-ELVSSGSMESACYLFE 92
T TPS N ++ + ITK A EL + S+ A +FE
Sbjct: 32 TKATPSSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFE 91
Query: 93 KM-SYLDTYIWNVVIRGFVDNGLFQEAVEFHHRMVCEGFKADYFTYPFVIKACAGLLYLS 151
SY +++N +IRG+ +GL EA+ RM+ G D +T+PF + ACA
Sbjct: 92 NSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKG 151
Query: 152 EGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPVRDTVSWNSMIGGYC 211
G ++HG + K G D++V NSL+ Y + G ++ A ++FDEM R+ VSW SMI GY
Sbjct: 152 NGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYA 211
Query: 212 S---VGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKIGKEIHCQVIKSGLEM 268
D V +FF+ +++ + + +++ + A + L+ G++++ + SG+E+
Sbjct: 212 RRDFAKDAVD--LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEV 269
Query: 269 DVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVVNAHFLESFSCLRKML 328
+ ++ ++LVDMY KC +D A+RLF+ N+ NAM YV E+ M+
Sbjct: 270 NDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMM 329
Query: 329 EDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGFLPNVALETALIDMYAGSGAL 388
D + PD I++++ + SC++L +L GKS HGY +R GF + ALIDMY
Sbjct: 330 -DSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQ 388
Query: 389 KMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMELFQDL-------WS---------- 431
++F M K +V+WN+++A YV NG+ A E F+ + W+
Sbjct: 389 DTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGS 448
Query: 432 ---------------EPLKPDAMTFASILPAYAEIATLSDSMQIHSLITKLGLVSNIYIS 476
E + D +T SI A + L + I+ I K G+ ++ +
Sbjct: 449 LFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLG 508
Query: 477 NSIVYMYAKCGDLQTA---------RDVVSWNVIIMAYAIHGLGKISIQLFSEMREKGIK 527
++V M+++CGD ++A RDV +W I A A+ G + +I+LF +M E+G+K
Sbjct: 509 TTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLK 568
Query: 528 PNESTFVSLLSSCSISGMVDEGWNYFDSMRKDYGIVPGIEHYGCIIDLLGRIGNLDQAKR 587
P+ FV L++CS G+V +G F SM K +G+ P HYGC++DLLGR G L++A +
Sbjct: 569 PDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQ 628
Query: 588 FIEEMPSAPTARIWGALLTASRKNNDIVSAEFAARHVLSSAQDNTGCYVLLSNMYAEAGR 647
IE+MP P IW +LL A R ++ A +AA + A + TG YVLLSN+YA AGR
Sbjct: 629 LIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGR 688
Query: 648 WEDVEQIKAIMEKEGLKKTTGCSMFEKNGETHRFINQDRSHSKTYLIYNVLDILLRKIGE 707
W D+ +++ M+++GL+K G S + G+TH F + D SH + I +LD + ++
Sbjct: 689 WNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASH 748
Query: 708 DFYIHNVSKFSPAHLMKNRAKSPHHHSVRLAISFGLISTSVGNPVLVRNNTRICEDCHSA 767
++ ++S K + HS +LA+++GLIS++ G + + N R+C DCHS
Sbjct: 749 LGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSF 808
Query: 768 VKKISEITKRELIVRDPKCFHHFRNGCCSCGDYW 801
K S++ RE+I+RD FH+ R G CSCGD+W
Sbjct: 809 AKFASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 441 bits (1134), Expect = e-122, Method: Compositional matrix adjust.
Identities = 241/722 (33%), Positives = 403/722 (55%), Gaps = 27/722 (3%)
Query: 98 DTYIWNVVIRGFVDNGLFQEAVEFHHRMVCEGFKADYFTYPFVIKACAGLLYLSEGEKVH 157
D +WN ++ + +G E +E M G + +T + AC G Y G+++H
Sbjct: 248 DAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIH 307
Query: 158 GSLFKSGLNS-DVYVCNSLIVMYMKLGCVECAERMFDEMPVRDTVSWNSMIGGYCSVGDG 216
S+ KS +S ++YVCN+LI MY + G + AER+ +M D V+WNS+I GY
Sbjct: 308 ASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMY 367
Query: 217 VSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKIGKEIHCQVIKSGLEMDVMVQTSL 276
+L FF +M G + D S+ S + A L G E+H VIK G + ++ V +L
Sbjct: 368 KEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTL 427
Query: 277 VDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVVNAHFLESFSCLRKMLEDDNLNPD 336
+DMY KC + Y R F + +++++W ++ GY N +E+ R + + + D
Sbjct: 428 IDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKK-RMEID 486
Query: 337 CITIINLLPSCTKLGALLEGKSIHGYAIRKGFLPNVALETALIDMYAGSGALKMTEKLFG 396
+ + ++L + + L ++L K IH + +RKG L V ++ L+D+Y + ++F
Sbjct: 487 EMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTV-IQNELVDVYGKCRNMGYATRVFE 545
Query: 397 SMIEKNLVSWNAMIAAYVRNGQNREAMELFQDLWSEPLKPDAMTFASILPAYAEIATLSD 456
S+ K++VSW +MI++ NG EA+ELF+ + L D++ IL A A ++ L+
Sbjct: 546 SIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNK 605
Query: 457 SMQIHSLITKLGLVSNIYISNSIVYMYAKCGDLQTARDV---------VSWNVIIMAYAI 507
+IH + + G I+ ++V MYA CGDLQ+A+ V + + +I AY +
Sbjct: 606 GREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGM 665
Query: 508 HGLGKISIQLFSEMREKGIKPNESTFVSLLSSCSISGMVDEGWNYFDSMRKDYGIVPGIE 567
HG GK +++LF +MR + + P+ +F++LL +CS +G++DEG + M +Y + P E
Sbjct: 666 HGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPE 725
Query: 568 HYGCIIDLLGRIGNLDQAKRFIEEMPSAPTARIWGALLTASRKNNDIVSAEFAARHVLSS 627
HY C++D+LGR + +A F++ M + PTA +W ALL A R +++ E AA+ +L
Sbjct: 726 HYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLEL 785
Query: 628 AQDNTGCYVLLSNMYAEAGRWEDVEQIKAIMEKEGLKKTTGCSMFEKNGETHRFINQDRS 687
N G VL+SN++AE GRW DVE+++A M+ G++K GCS E +G+ H+F +D+S
Sbjct: 786 EPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKS 845
Query: 688 HSKTYLIYNVLDILLRKIGED--------FYIHNVSKFSPAHLMKNRAKSPHHHSVRLAI 739
H ++ IY L + RK+ + F +HNV + ++ H HS R+AI
Sbjct: 846 HPESKEIYEKLSEVTRKLEREVGYVADTKFVLHNVDEGEKVQML-------HGHSERIAI 898
Query: 740 SFGLISTSVGNPVLVRNNTRICEDCHSAVKKISEITKRELIVRDPKCFHHFRNGCCSCGD 799
++GL+ T + + N R+C DCH+ K +S++ +R++++RD FHHF +G CSCGD
Sbjct: 899 AYGLLRTPDRACLRITKNLRVCRDCHTFCKLVSKLFRRDIVMRDANRFHHFESGLCSCGD 958
Query: 800 YW 801
W
Sbjct: 959 SW 960
Score = 241 bits (614), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 153/523 (29%), Positives = 272/523 (52%), Gaps = 19/523 (3%)
Query: 82 GSMESACYLFEKMSYLDTYIWNVVIRGFVDNGLFQEAVEFHHRMVCEGFKADYFTYPFVI 141
GS++ A +F++M + WN +I +V NG A+ + M EG ++P ++
Sbjct: 130 GSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALL 189
Query: 142 KACAGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPVR-DT 200
KACA L + G ++H L K G +S ++ N+L+ MY K + A R+FD + D
Sbjct: 190 KACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDA 249
Query: 201 VSWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKIGKEIHCQ 260
V WNS++ Y + G + +L F+EM G + ++++SAL A K+GKEIH
Sbjct: 250 VLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHAS 309
Query: 261 VIKSGLE-MDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVVNAHFLE 319
V+KS ++ V +L+ MY +CG + AER+ + ++V WN+++ GYV N + E
Sbjct: 310 VLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKE 369
Query: 320 SFSCLRKMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGFLPNVALETALI 379
+ M+ + D +++ +++ + +L LL G +H Y I+ G+ N+ + LI
Sbjct: 370 ALEFFSDMIAAGH-KSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLI 428
Query: 380 DMYAGSGALKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMELFQDLWSEPLKPDAM 439
DMY+ + F M +K+L+SW +IA Y +N + EA+ELF+D+ + ++ D M
Sbjct: 429 DMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEM 488
Query: 440 TFASILPAYAEIATLSDSMQIHSLITKLGLVSNIYISNSIVYMYAKCGDLQTA------- 492
SIL A + + ++ +IH I + GL+ + I N +V +Y KC ++ A
Sbjct: 489 ILGSILRASSVLKSMLIVKEIHCHILRKGLLDTV-IQNELVDVYGKCRNMGYATRVFESI 547
Query: 493 --RDVVSWNVIIMAYAIHGLGKISIQLFSEMREKGIKPNESTFVSLLSSCSISGMVDEGW 550
+DVVSW +I + A++G +++LF M E G+ + + +LS+ + +++G
Sbjct: 548 KGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGR 607
Query: 551 N-YFDSMRKDYGI-----VPGIEHYGCIIDLLGRIGNLDQAKR 587
+ +RK + + V ++ Y C DL D+ +R
Sbjct: 608 EIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIER 650
Score = 213 bits (542), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 155/546 (28%), Positives = 268/546 (49%), Gaps = 34/546 (6%)
Query: 82 GSMESACYLFEKMSYLDTYIWNVVIRGFVDNGLFQEAVEFHHRMVCEGFKADYFTYPFVI 141
G M A + +M+ D WN +I+G+V N +++EA+EF M+ G K+D + +I
Sbjct: 334 GKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSII 393
Query: 142 KACAGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPVRDTV 201
A L L G ++H + K G +S++ V N+LI MY K R F M +D +
Sbjct: 394 AASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLI 453
Query: 202 SWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKIGKEIHCQV 261
SW ++I GY V +L F+++ + D L S L A S+ + I KEIHC +
Sbjct: 454 SWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHI 513
Query: 262 IKSGLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVVNAHFLESF 321
++ GL +D ++Q LVD+YGKC + YA R+F I +++V+W +M+ +N + E+
Sbjct: 514 LRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAV 572
Query: 322 SCLRKMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGFLPNVALETALIDM 381
R+M+E L+ D + ++ +L + L AL +G+ IH Y +RKGF ++ A++DM
Sbjct: 573 ELFRRMVE-TGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDM 631
Query: 382 YAGSGALKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMELFQDLWSEPLKPDAMTF 441
YA G L+ + +F + K L+ + +MI AY +G + A+ELF + E + PD ++F
Sbjct: 632 YACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISF 691
Query: 442 ASILPAYAEIATLSDSMQIHSLITK-----------LGLVSNIYISNSIVYMYAKCGDLQ 490
++L A + L + ++ + LV + +N +V + ++
Sbjct: 692 LALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMK 751
Query: 491 TARDVVSWNVIIMAYAIHG---LGKISIQLFSEMREKGIKPNESTFVSLLSSCSISGMVD 547
T W ++ A H +G+I+ Q E+ K P VS + +
Sbjct: 752 TEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKN--PGNLVLVS-------NVFAE 802
Query: 548 EG-WNYFDSMRKDYGIVPGIEHYGC-IIDLLGRIGNLDQAKRFIEEMPSAPTAR-IWGAL 604
+G WN + +R +H GC I++ G++ +F S P ++ I+ L
Sbjct: 803 QGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKV------HKFTARDKSHPESKEIYEKL 856
Query: 605 LTASRK 610
+RK
Sbjct: 857 SEVTRK 862
Score = 195 bits (495), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 133/503 (26%), Positives = 251/503 (49%), Gaps = 19/503 (3%)
Query: 136 TYPFVIKACAGLLYLSEGEKVHGSLFKSGLNSDV-YVCNSLIVMYMKLGCVECAERMFDE 194
+ +V++ C +S+G ++H +FK+ + ++ ++ L+ MY K G ++ AE++FDE
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDE 141
Query: 195 MPVRDTVSWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKIG 254
MP R +WN+MIG Y S G+ S+L + M+ G+ S + L A + ++ G
Sbjct: 142 MPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSG 201
Query: 255 KEIHCQVIKSGLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPR-NIVAWNAMVGGYVV 313
E+H ++K G + +LV MY K + A RLF+ + + V WN+++ Y
Sbjct: 202 SELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYST 261
Query: 314 NAHFLESFSCLRKMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKG-FLPNV 372
+ LE+ R+M P+ TI++ L +C GK IH ++ +
Sbjct: 262 SGKSLETLELFREM-HMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSEL 320
Query: 373 ALETALIDMYAGSGALKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMELFQDLWSE 432
+ ALI MY G + E++ M ++V+WN++I YV+N +EA+E F D+ +
Sbjct: 321 YVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAA 380
Query: 433 PLKPDAMTFASILPAYAEIATLSDSMQIHSLITKLGLVSNIYISNSIVYMYAKCGDL--- 489
K D ++ SI+ A ++ L M++H+ + K G SN+ + N+++ MY+KC
Sbjct: 381 GHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYM 440
Query: 490 ------QTARDVVSWNVIIMAYAIHGLGKISIQLFSEMREKGIKPNESTFVSLLSSCSI- 542
+D++SW +I YA + +++LF ++ +K ++ +E S+L + S+
Sbjct: 441 GRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVL 500
Query: 543 SGMVDEGWNYFDSMRKDYGIVPGIEHYGCIIDLLGRIGNLDQAKRFIEEMPSAPTARIWG 602
M+ + +RK G++ + ++D+ G+ N+ A R E + W
Sbjct: 501 KSMLIVKEIHCHILRK--GLLDTVIQNE-LVDVYGKCRNMGYATRVFESIKGKDVVS-WT 556
Query: 603 ALLTASRKN-NDIVSAEFAARHV 624
+++++S N N+ + E R V
Sbjct: 557 SMISSSALNGNESEAVELFRRMV 579
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 440 bits (1131), Expect = e-122, Method: Compositional matrix adjust.
Identities = 233/697 (33%), Positives = 397/697 (56%), Gaps = 49/697 (7%)
Query: 151 SEGEKVHGSLFKSGLNSDVYVCNSLIV-MYMKLGCVECAERMFDEMPVRDTVSWNSMIGG 209
S+ +++H ++ S + S+++ +Y L + A +F + ++W S+I
Sbjct: 22 SQAKQLHAQFIRT--QSLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRC 79
Query: 210 YCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKIGKEIHCQVIKSGLEMD 269
+ +L F EM+ G D S L + ++ L+ G+ +H +++ G++ D
Sbjct: 80 FTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCD 139
Query: 270 VMVQTSLVDMYGKC-GV-----------------------------------VDYAERLF 293
+ +L++MY K G+ +D R+F
Sbjct: 140 LYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVF 199
Query: 294 NMIFPRNIVAWNAMVGGYVVNAHFLESFSCLRKMLEDDNLNPDCITIINLLPSCTKLGAL 353
++ +++V++N ++ GY + + ++ +R+M D L PD T+ ++LP ++ +
Sbjct: 200 EVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTD-LKPDSFTLSSVLPIFSEYVDV 258
Query: 354 LEGKSIHGYAIRKGFLPNVALETALIDMYAGSGALKMTEKLFGSMIEKNLVSWNAMIAAY 413
++GK IHGY IRKG +V + ++L+DMYA S ++ +E++F + ++ +SWN+++A Y
Sbjct: 259 IKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGY 318
Query: 414 VRNGQNREAMELFQDLWSEPLKPDAMTFASILPAYAEIATLSDSMQIHSLITKLGLVSNI 473
V+NG+ EA+ LF+ + + +KP A+ F+S++PA A +ATL Q+H + + G SNI
Sbjct: 319 VQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNI 378
Query: 474 YISNSIVYMYAKCGDLQTAR---------DVVSWNVIIMAYAIHGLGKISIQLFSEMREK 524
+I++++V MY+KCG+++ AR D VSW IIM +A+HG G ++ LF EM+ +
Sbjct: 379 FIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQ 438
Query: 525 GIKPNESTFVSLLSSCSISGMVDEGWNYFDSMRKDYGIVPGIEHYGCIIDLLGRIGNLDQ 584
G+KPN+ FV++L++CS G+VDE W YF+SM K YG+ +EHY + DLLGR G L++
Sbjct: 439 GVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEE 498
Query: 585 AKRFIEEMPSAPTARIWGALLTASRKNNDIVSAEFAARHVLSSAQDNTGCYVLLSNMYAE 644
A FI +M PT +W LL++ + ++ AE A + + +N G YVL+ NMYA
Sbjct: 499 AYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYAS 558
Query: 645 AGRWEDVEQIKAIMEKEGLKKTTGCSMFEKNGETHRFINQDRSHSKTYLIYNVLDILLRK 704
GRW+++ +++ M K+GL+K CS E +TH F++ DRSH I L ++ +
Sbjct: 559 NGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQ 618
Query: 705 IGEDFYIHNVSKFSPAHLMKNRAKSPHHHSVRLAISFGLISTSVGNPVLVRNNTRICEDC 764
+ ++ Y+ + S +++ + HS RLA++FG+I+T G + V N RIC DC
Sbjct: 619 MEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDC 678
Query: 765 HSAVKKISEITKRELIVRDPKCFHHFRNGCCSCGDYW 801
H A+K IS+IT+RE+IVRD FHHF G CSCGDYW
Sbjct: 679 HVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 235 bits (600), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 140/478 (29%), Positives = 240/478 (50%), Gaps = 63/478 (13%)
Query: 102 WNVVIRGFVDNGLFQEAVEFHHRMVCEGFKADYFTYPFVIKACAGLLYLSEGEKVHGSLF 161
W VIR F D LF +A+ M G D+ +P V+K+C ++ L GE VHG +
Sbjct: 73 WKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIV 132
Query: 162 KSGLNSDVYVCNSLIVMYMKL-------------------------------GC-----V 185
+ G++ D+Y N+L+ MY KL C +
Sbjct: 133 RLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGI 192
Query: 186 ECAERMFDEMPVRDTVSWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAI 245
+ R+F+ MP +D VS+N++I GY G +L +EM L+ D F+L S L
Sbjct: 193 DSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIF 252
Query: 246 SIEGCLKIGKEIHCQVIKSGLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWN 305
S + GKEIH VI+ G++ DV + +SLVDMY K ++ +ER+F+ ++ R+ ++WN
Sbjct: 253 SEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWN 312
Query: 306 AMVGGYVVNAHFLESFSCLRKMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIR 365
++V GYV N + E+ R+M+ + P + +++P+C L L GK +HGY +R
Sbjct: 313 SLVAGYVQNGRYNEALRLFRQMVT-AKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLR 371
Query: 366 KGFLPNVALETALIDMYAGSGALKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMEL 425
GF N+ + +AL+DMY+ G +K K+F M + VSW A+I + +G EA+ L
Sbjct: 372 GGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSL 431
Query: 426 FQDLWSEPLKPDAMTFASILPAYAEIATLSDSMQIHSLITKL-GLVSNIYISNSIVYMYA 484
F+++ + +KP+ + F ++L A + + + ++ + +TK+ GL + ++ +
Sbjct: 432 FEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLG 491
Query: 485 KCGDLQTARDVVSWNVIIMAYAIHGLGKISIQLFSEMREKGIKPNESTFVSLLSSCSI 542
+ G L+ A + +S + ++P S + +LLSSCS+
Sbjct: 492 RAGKLEEAYNFIS-------------------------KMCVEPTGSVWSTLLSSCSV 524
Score = 156 bits (395), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 178/334 (53%), Gaps = 9/334 (2%)
Query: 84 MESACYLFEKMSYLDTYIWNVVIRGFVDNGLFQEAVEFHHRMVCEGFKADYFTYPFVIKA 143
++S +FE M D +N +I G+ +G++++A+ M K D FT V+
Sbjct: 192 IDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPI 251
Query: 144 CAGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPVRDTVSW 203
+ + + +G+++HG + + G++SDVY+ +SL+ MY K +E +ER+F + RD +SW
Sbjct: 252 FSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISW 311
Query: 204 NSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKIGKEIHCQVIK 263
NS++ GY G +L F++M ++ + S + A + L +GK++H V++
Sbjct: 312 NSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLR 371
Query: 264 SGLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVVNAHFLESFSC 323
G ++ + ++LVDMY KCG + A ++F+ + + V+W A++ G+ ++ H E+ S
Sbjct: 372 GGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSL 431
Query: 324 LRKMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGY--AIRKGFLPNVALE--TALI 379
+M + + P+ + + +L +C+ +G + E GY ++ K + N LE A+
Sbjct: 432 FEEM-KRQGVKPNQVAFVAVLTACSHVGLVDEA---WGYFNSMTKVYGLNQELEHYAAVA 487
Query: 380 DMYAGSGALKMTEKLFGSM-IEKNLVSWNAMIAA 412
D+ +G L+ M +E W+ ++++
Sbjct: 488 DLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSS 521
Score = 110 bits (274), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 112/210 (53%), Gaps = 1/210 (0%)
Query: 81 SGSMESACYLFEKMSYLDTYIWNVVIRGFVDNGLFQEAVEFHHRMVCEGFKADYFTYPFV 140
S +E + +F ++ D WN ++ G+V NG + EA+ +MV K + V
Sbjct: 290 SARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSV 349
Query: 141 IKACAGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPVRDT 200
I ACA L L G+++HG + + G S++++ ++L+ MY K G ++ A ++FD M V D
Sbjct: 350 IPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDE 409
Query: 201 VSWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKIGKEIHCQ 260
VSW ++I G+ G G ++ F+EM+ G++ ++ + ++ L A S G +
Sbjct: 410 VSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNS 469
Query: 261 VIKS-GLEMDVMVQTSLVDMYGKCGVVDYA 289
+ K GL ++ ++ D+ G+ G ++ A
Sbjct: 470 MTKVYGLNQELEHYAAVADLLGRAGKLEEA 499
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 139/323 (43%), Gaps = 39/323 (12%)
Query: 340 IINLLPSCTKLGALLEGKSIHGYAIRKGFLPNVALETALIDMYAGSGALKMTEKLFGSMI 399
I L+ + T++ + + K +H IR L + + + +I +Y L LF ++
Sbjct: 8 IKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTS-ASIVISIYTNLKLLHEALLLFKTLK 66
Query: 400 EKNLVSWNAMIAAYVRNGQNREAMELFQDLWSEPLKPDAMTFASILPAYAEIATLSDSMQ 459
+++W ++I + +A+ F ++ + PD F S+L + + L
Sbjct: 67 SPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGES 126
Query: 460 IHSLITKLGLVSNIYISNSIVYMYAKCGDLQTARDVVSWNVIIMAYAIHGLG-KISI-QL 517
+H I +LG+ ++Y N+++ MYAK + G+G KIS+ +
Sbjct: 127 VHGFIVRLGMDCDLYTGNALMNMYAK---------------------LLGMGSKISVGNV 165
Query: 518 FSEMREKGIKPNESTFVSLLSSCSISGMVDEGWNYFDSM-RKDYGIVPGIEHYGCIIDLL 576
F EM ++ + + +C + +D F+ M RKD + Y II
Sbjct: 166 FDEMPQRTSNSGDEDVKA--ETCIMPFGIDSVRRVFEVMPRKD------VVSYNTIIAGY 217
Query: 577 GRIGNLDQAKRFIEEMPSA---PTARIWGALLTASRKNNDIVSAEFAARHVLSSAQDNTG 633
+ G + A R + EM + P + ++L + D++ + +V+ D +
Sbjct: 218 AQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGID-SD 276
Query: 634 CYV--LLSNMYAEAGRWEDVEQI 654
Y+ L +MYA++ R ED E++
Sbjct: 277 VYIGSSLVDMYAKSARIEDSERV 299
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 439 bits (1128), Expect = e-122, Method: Compositional matrix adjust.
Identities = 237/689 (34%), Positives = 383/689 (55%), Gaps = 27/689 (3%)
Query: 129 GFKADYFTYPFVIKACAGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECA 188
G +D F + A + ++ +++H L GL ++ LI G + A
Sbjct: 17 GIHSDSFYASLIDSAT----HKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFA 72
Query: 189 ERMFDEMPVRDTVSWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIE 248
++FD++P WN++I GY +L+ + MQ + D F+ L A S
Sbjct: 73 RQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGL 132
Query: 249 GCLKIGKEIHCQVIKSGLEMDVMVQTSLVDMYGKCGVVDYAERLFN-MIFP-RNIVAWNA 306
L++G+ +H QV + G + DV VQ L+ +Y KC + A +F + P R IV+W A
Sbjct: 133 SHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTA 192
Query: 307 MVGGYVVNAHFLES---FSCLRKMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYA 363
+V Y N +E+ FS +RKM ++ PD + ++++L + T L L +G+SIH
Sbjct: 193 IVSAYAQNGEPMEALEIFSQMRKM----DVKPDWVALVSVLNAFTCLQDLKQGRSIHASV 248
Query: 364 IRKGFLPNVALETALIDMYAGSGALKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAM 423
++ G L +L MYA G + + LF M NL+ WNAMI+ Y +NG REA+
Sbjct: 249 VKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAI 308
Query: 424 ELFQDLWSEPLKPDAMTFASILPAYAEIATLSDSMQIHSLITKLGLVSNIYISNSIVYMY 483
++F ++ ++ ++PD ++ S + A A++ +L + ++ + + +++IS++++ M+
Sbjct: 309 DMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMF 368
Query: 484 AKCGDLQTAR---------DVVSWNVIIMAYAIHGLGKISIQLFSEMREKGIKPNESTFV 534
AKCG ++ AR DVV W+ +I+ Y +HG + +I L+ M G+ PN+ TF+
Sbjct: 369 AKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFL 428
Query: 535 SLLSSCSISGMVDEGWNYFDSMRKDYGIVPGIEHYGCIIDLLGRIGNLDQAKRFIEEMPS 594
LL +C+ SGMV EGW +F+ M D+ I P +HY C+IDLLGR G+LDQA I+ MP
Sbjct: 429 GLLMACNHSGMVREGWWFFNRM-ADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPV 487
Query: 595 APTARIWGALLTASRKNNDIVSAEFAARHVLSSAQDNTGCYVLLSNMYAEAGRWEDVEQI 654
P +WGALL+A +K+ + E+AA+ + S NTG YV LSN+YA A W+ V ++
Sbjct: 488 QPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEV 547
Query: 655 KAIMEKEGLKKTTGCSMFEKNGETHRFINQDRSHSKTYLIYNVLDILLRKIGEDFYIHNV 714
+ M+++GL K GCS E G F D+SH + I ++ + ++ E ++ N
Sbjct: 548 RVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVAN- 606
Query: 715 SKFSPAHLMKNRAKSPH--HHSVRLAISFGLISTSVGNPVLVRNNTRICEDCHSAVKKIS 772
K + H + + HS R+AI++GLIST G P+ + N R C +CH+A K IS
Sbjct: 607 -KDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLIS 665
Query: 773 EITKRELIVRDPKCFHHFRNGCCSCGDYW 801
++ RE++VRD FHHF++G CSCGDYW
Sbjct: 666 KLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 235 bits (599), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 122/378 (32%), Positives = 215/378 (56%), Gaps = 3/378 (0%)
Query: 72 TRALQELVSSGSMESACYLFEKMSYLDTYIWNVVIRGFVDNGLFQEAVEFHHRMVCEGFK 131
T+ + S G + A +F+ + + WN +IRG+ N FQ+A+ + M
Sbjct: 57 TKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVS 116
Query: 132 ADYFTYPFVIKACAGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERM 191
D FT+P ++KAC+GL +L G VH +F+ G ++DV+V N LI +Y K + A +
Sbjct: 117 PDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTV 176
Query: 192 FDEMPV--RDTVSWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEG 249
F+ +P+ R VSW +++ Y G+ + +L F +M+ ++ D +L+S L A +
Sbjct: 177 FEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQ 236
Query: 250 CLKIGKEIHCQVIKSGLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVG 309
LK G+ IH V+K GLE++ + SL MY KCG V A+ LF+ + N++ WNAM+
Sbjct: 237 DLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMIS 296
Query: 310 GYVVNAHFLESFSCLRKMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGFL 369
GY N + E+ +M+ D + PD I+I + + +C ++G+L + +S++ Y R +
Sbjct: 297 GYAKNGYAREAIDMFHEMINKD-VRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYR 355
Query: 370 PNVALETALIDMYAGSGALKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMELFQDL 429
+V + +ALIDM+A G+++ +F +++++V W+AMI Y +G+ REA+ L++ +
Sbjct: 356 DDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAM 415
Query: 430 WSEPLKPDAMTFASILPA 447
+ P+ +TF +L A
Sbjct: 416 ERGGVHPNDVTFLGLLMA 433
Score = 150 bits (379), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 161/330 (48%), Gaps = 4/330 (1%)
Query: 86 SACYLFEKMSYLDTYI--WNVVIRGFVDNGLFQEAVEFHHRMVCEGFKADYFTYPFVIKA 143
SA +FE + + I W ++ + NG EA+E +M K D+ V+ A
Sbjct: 172 SARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNA 231
Query: 144 CAGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPVRDTVSW 203
L L +G +H S+ K GL + + SL MY K G V A+ +FD+M + + W
Sbjct: 232 FTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILW 291
Query: 204 NSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKIGKEIHCQVIK 263
N+MI GY G ++ F EM N +R D S+ SA+ A + G L+ + ++ V +
Sbjct: 292 NAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGR 351
Query: 264 SGLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVVNAHFLESFSC 323
S DV + ++L+DM+ KCG V+ A +F+ R++V W+AM+ GY ++ E+ S
Sbjct: 352 SDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISL 411
Query: 324 LRKMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGFLPNVALETALIDMYA 383
R M E ++P+ +T + LL +C G + EG P +ID+
Sbjct: 412 YRAM-ERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLG 470
Query: 384 GSGALKMTEKLFGSM-IEKNLVSWNAMIAA 412
+G L ++ M ++ + W A+++A
Sbjct: 471 RAGHLDQAYEVIKCMPVQPGVTVWGALLSA 500
Score = 100 bits (249), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 110/228 (48%), Gaps = 1/228 (0%)
Query: 82 GSMESACYLFEKMSYLDTYIWNVVIRGFVDNGLFQEAVEFHHRMVCEGFKADYFTYPFVI 141
G + +A LF+KM + +WN +I G+ NG +EA++ H M+ + + D + I
Sbjct: 271 GQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAI 330
Query: 142 KACAGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPVRDTV 201
ACA + L + ++ + +S DV++ ++LI M+ K G VE A +FD RD V
Sbjct: 331 SACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVV 390
Query: 202 SWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKIGKEIHCQV 261
W++MI GY G ++ ++ M+ G+ + + + L A + G ++ G ++
Sbjct: 391 VWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRM 450
Query: 262 IKSGLEMDVMVQTSLVDMYGKCGVVDYAERLFN-MIFPRNIVAWNAMV 308
+ ++D+ G+ G +D A + M + W A++
Sbjct: 451 ADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALL 498
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 439 bits (1128), Expect = e-122, Method: Compositional matrix adjust.
Identities = 226/620 (36%), Positives = 366/620 (59%), Gaps = 17/620 (2%)
Query: 199 DTVSWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKIGKEIH 258
D SWNS+I GD +L+ F M+ L R S A+ A S + GK+ H
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99
Query: 259 CQVIKSGLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVVNAHFL 318
Q G + D+ V ++L+ MY CG ++ A ++F+ I RNIV+W +M+ GY +N + L
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNAL 159
Query: 319 ESFSCLRKML-----EDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGFLPNVA 373
++ S + +L +DD + D + +++++ +C+++ A +SIH + I++GF V+
Sbjct: 160 DAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVS 219
Query: 374 LETALIDMYA--GSGALKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMELFQDLWS 431
+ L+D YA G G + + K+F +++K+ VS+N++++ Y ++G + EA E+F+ L
Sbjct: 220 VGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVK 279
Query: 432 EPLKP-DAMTFASILPAYAEIATLSDSMQIHSLITKLGLVSNIYISNSIVYMYAKCGDLQ 490
+ +A+T +++L A + L IH + ++GL ++ + SI+ MY KCG ++
Sbjct: 280 NKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVE 339
Query: 491 TAR---------DVVSWNVIIMAYAIHGLGKISIQLFSEMREKGIKPNESTFVSLLSSCS 541
TAR +V SW +I Y +HG +++LF M + G++PN TFVS+L++CS
Sbjct: 340 TARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACS 399
Query: 542 ISGMVDEGWNYFDSMRKDYGIVPGIEHYGCIIDLLGRIGNLDQAKRFIEEMPSAPTARIW 601
+G+ EGW +F++M+ +G+ PG+EHYGC++DLLGR G L +A I+ M P + IW
Sbjct: 400 HAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIW 459
Query: 602 GALLTASRKNNDIVSAEFAARHVLSSAQDNTGCYVLLSNMYAEAGRWEDVEQIKAIMEKE 661
+LL A R + ++ AE + + N G Y+LLS++YA+AGRW+DVE+++ IM+
Sbjct: 460 SSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNR 519
Query: 662 GLKKTTGCSMFEKNGETHRFINQDRSHSKTYLIYNVLDILLRKIGEDFYIHNVSKFSPAH 721
GL K G S+ E NGE H F+ D H + IY L L RK+ E Y+ N S
Sbjct: 520 GLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDV 579
Query: 722 LMKNRAKSPHHHSVRLAISFGLISTSVGNPVLVRNNTRICEDCHSAVKKISEITKRELIV 781
+ + + HS +LAI+FG+++T G+ V V N R+C DCH+ +K IS+I RE +V
Sbjct: 580 DEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVV 639
Query: 782 RDPKCFHHFRNGCCSCGDYW 801
RD K FHHF++G CSCGDYW
Sbjct: 640 RDAKRFHHFKDGGCSCGDYW 659
Score = 200 bits (508), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 132/446 (29%), Positives = 224/446 (50%), Gaps = 22/446 (4%)
Query: 98 DTYIWNVVIRGFVDNGLFQEAVEFHHRMVCEGFKADYFTYPFVIKACAGLLYLSEGEKVH 157
D + WN VI +G EA+ M ++P IKAC+ L + G++ H
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99
Query: 158 GSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPVRDTVSWNSMIGGYCSVGDGV 217
F G SD++V ++LIVMY G +E A ++FDE+P R+ VSW SMI GY G+ +
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNAL 159
Query: 218 SSLVFFKEM------QNCGLRYDRFSLISALGAISIEGCLKIGKEIHCQVIKSGLEMDVM 271
++ FK++ + + D L+S + A S + + IH VIK G + V
Sbjct: 160 DAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVS 219
Query: 272 VQTSLVDMYGKCGV--VDYAERLFNMIFPRNIVAWNAMVGGYVVNAHFLESFSCLRKMLE 329
V +L+D Y K G V A ++F+ I ++ V++N+++ Y + E+F R++++
Sbjct: 220 VGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVK 279
Query: 330 DDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGFLPNVALETALIDMYAGSGALK 389
+ + + IT+ +L + + GAL GK IH IR G +V + T++IDMY G ++
Sbjct: 280 NKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVE 339
Query: 390 MTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMELFQDLWSEPLKPDAMTFASILPAYA 449
K F M KN+ SW AMIA Y +G +A+ELF + ++P+ +TF S+L A +
Sbjct: 340 TARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACS 399
Query: 450 EIATLSDSMQ-IHSLITKLGLVSNIYISNSIVYMYAKCGDLQTARDVVS----------W 498
+ + +++ + G+ + +V + + G LQ A D++ W
Sbjct: 400 HAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIW 459
Query: 499 NVIIMAYAIHG---LGKISIQLFSEM 521
+ ++ A IH L +IS+ E+
Sbjct: 460 SSLLAACRIHKNVELAEISVARLFEL 485
Score = 40.0 bits (92), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 76/170 (44%), Gaps = 9/170 (5%)
Query: 69 ITKTRALQELVSSGSMESACYLFEKMSYLDTYIWNVVIRGFVDNGLFQEAVEFHHRMVCE 128
I T + G +E+A F++M + W +I G+ +G +A+E M+
Sbjct: 323 IVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDS 382
Query: 129 GFKADYFTYPFVIKACAGLLYLSEGEKVHGSL-FKSGLNSDVYVCNSLIVMYMKLGCVEC 187
G + +Y T+ V+ AC+ EG + ++ + G+ + ++ + + G ++
Sbjct: 383 GVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQK 442
Query: 188 AERMFDEMPVR-DTVSWNSMIGGYCSVGDGVS------SLVFFKEMQNCG 230
A + M ++ D++ W+S++ C + V + +F + NCG
Sbjct: 443 AYDLIQRMKMKPDSIIWSSLLAA-CRIHKNVELAEISVARLFELDSSNCG 491
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 433 bits (1114), Expect = e-120, Method: Compositional matrix adjust.
Identities = 250/730 (34%), Positives = 403/730 (55%), Gaps = 12/730 (1%)
Query: 82 GSMESACYLFEKMSYLDTYIWNVVIRGFVDNGLFQEAVEFHHRMVCEGFKADYFTYPFVI 141
G + A +F++M D WN +I G+ +G ++EA+E +H + D FT V+
Sbjct: 155 GLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVL 214
Query: 142 KACAGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPVRDTV 201
A LL + +G+ +HG KSG+NS V V N L+ MY+K A R+FDEM VRD+V
Sbjct: 215 PAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSV 274
Query: 202 SWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKIGKEIHCQV 261
S+N+MI GY + S+ F E + + D ++ S L A L + K I+ +
Sbjct: 275 SYNTMICGYLKLEMVEESVRMFLENLD-QFKPDLLTVSSVLRACGHLRDLSLAKYIYNYM 333
Query: 262 IKSGLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVVNAHFLESF 321
+K+G ++ V+ L+D+Y KCG + A +FN + ++ V+WN+++ GY+ + +E+
Sbjct: 334 LKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAM 393
Query: 322 SCLRKMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGFLPNVALETALIDM 381
+ M+ + D IT + L+ T+L L GK +H I+ G ++++ ALIDM
Sbjct: 394 KLFKMMMIMEE-QADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDM 452
Query: 382 YAGSGALKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMELFQDLWSEPLKPDAMTF 441
YA G + + K+F SM + V+WN +I+A VR G +++ + + PD TF
Sbjct: 453 YAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATF 512
Query: 442 ASILPAYAEIATLSDSMQIHSLITKLGLVSNIYISNSIVYMYAKCGDLQTA--------- 492
LP A +A +IH + + G S + I N+++ MY+KCG L+ +
Sbjct: 513 LVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSR 572
Query: 493 RDVVSWNVIIMAYAIHGLGKISIQLFSEMREKGIKPNESTFVSLLSSCSISGMVDEGWNY 552
RDVV+W +I AY ++G G+ +++ F++M + GI P+ F++++ +CS SG+VDEG
Sbjct: 573 RDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLAC 632
Query: 553 FDSMRKDYGIVPGIEHYGCIIDLLGRIGNLDQAKRFIEEMPSAPTARIWGALLTASRKNN 612
F+ M+ Y I P IEHY C++DLL R + +A+ FI+ MP P A IW ++L A R +
Sbjct: 633 FEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSG 692
Query: 613 DIVSAEFAARHVLSSAQDNTGCYVLLSNMYAEAGRWEDVEQIKAIMEKEGLKKTTGCSMF 672
D+ +AE +R ++ D+ G +L SN YA +W+ V I+ ++ + + K G S
Sbjct: 693 DMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWI 752
Query: 673 EKNGETHRFINQDRSHSKTYLIYNVLDILLRKIGEDFYIHNVSKFSP-AHLMKNRAKSPH 731
E H F + D S ++ IY L+IL + ++ YI + + S + + +
Sbjct: 753 EVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYIPDPREVSQNLEEEEEKRRLIC 812
Query: 732 HHSVRLAISFGLISTSVGNPVLVRNNTRICEDCHSAVKKISEITKRELIVRDPKCFHHFR 791
HS RLAI+FGL++T G P+ V N R+C DCH K IS+I RE++VRD FH F+
Sbjct: 813 GHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTKLISKIVGREILVRDANRFHLFK 872
Query: 792 NGCCSCGDYW 801
+G CSC D W
Sbjct: 873 DGTCSCKDRW 882
Score = 260 bits (665), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 167/520 (32%), Positives = 277/520 (53%), Gaps = 15/520 (2%)
Query: 98 DTYIWNVVIRGFVDNGLFQEAVEFHHRMVCEGFKADYFTYPFVIKACAGLLYLSEGEKVH 157
+ Y+WN +IR F NGLF EA+EF+ ++ D +T+P VIKACAGL G+ V+
Sbjct: 70 NVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVY 129
Query: 158 GSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPVRDTVSWNSMIGGYCSVGDGV 217
+ G SD++V N+L+ MY ++G + A ++FDEMPVRD VSWNS+I GY S G
Sbjct: 130 EQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYE 189
Query: 218 SSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKIGKEIHCQVIKSGLEMDVMVQTSLV 277
+L + E++N + D F++ S L A +K G+ +H +KSG+ V+V LV
Sbjct: 190 EALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLV 249
Query: 278 DMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVVNAHFLESFSCLRKMLED-DNLNPD 336
MY K A R+F+ + R+ V++N M+ GY+ ES +R LE+ D PD
Sbjct: 250 AMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEES---VRMFLENLDQFKPD 306
Query: 337 CITIINLLPSCTKLGALLEGKSIHGYAIRKGFLPNVALETALIDMYAGSGALKMTEKLFG 396
+T+ ++L +C L L K I+ Y ++ GF+ + LID+YA G + +F
Sbjct: 307 LLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFN 366
Query: 397 SMIEKNLVSWNAMIAAYVRNGQNREAMELFQDLWSEPLKPDAMTFASILPAYAEIATLSD 456
SM K+ VSWN++I+ Y+++G EAM+LF+ + + D +T+ ++ +A L
Sbjct: 367 SMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKF 426
Query: 457 SMQIHSLITKLGLVSNIYISNSIVYMYAKCGDLQTAR---------DVVSWNVIIMAYAI 507
+HS K G+ ++ +SN+++ MYAKCG++ + D V+WN +I A
Sbjct: 427 GKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVR 486
Query: 508 HGLGKISIQLFSEMREKGIKPNESTFVSLLSSCSISGMVDEGWNYFDSMRKDYGIVPGIE 567
G +Q+ ++MR+ + P+ +TF+ L C+ G + + +G ++
Sbjct: 487 FGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLR-FGYESELQ 545
Query: 568 HYGCIIDLLGRIGNLDQAKRFIEEMPSAPTARIWGALLTA 607
+I++ + G L+ + R E M S W ++ A
Sbjct: 546 IGNALIEMYSKCGCLENSSRVFERM-SRRDVVTWTGMIYA 584
Score = 170 bits (430), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 122/490 (24%), Positives = 240/490 (48%), Gaps = 14/490 (2%)
Query: 138 PFVIKACAGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERMFDEM-P 196
PF+ +A + L+E ++H + GL+S + LI Y + +F + P
Sbjct: 8 PFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSP 67
Query: 197 VRDTVSWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKIGKE 256
++ WNS+I + G +L F+ +++ + D+++ S + A + ++G
Sbjct: 68 AKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDL 127
Query: 257 IHCQVIKSGLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVVNAH 316
++ Q++ G E D+ V +LVDMY + G++ A ++F+ + R++V+WN+++ GY + +
Sbjct: 128 VYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGY 187
Query: 317 FLESFSCLRKMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGFLPNVALET 376
+ E+ + L++ + PD T+ ++LP+ L + +G+ +HG+A++ G V +
Sbjct: 188 YEEALEIYHE-LKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNN 246
Query: 377 ALIDMYAGSGALKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMELFQDLWSEPLKP 436
L+ MY ++F M ++ VS+N MI Y++ E++ +F + + KP
Sbjct: 247 GLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FKP 305
Query: 437 DAMTFASILPAYAEIATLSDSMQIHSLITKLGLVSNIYISNSIVYMYAKCGDLQTARDV- 495
D +T +S+L A + LS + I++ + K G V + N ++ +YAKCGD+ TARDV
Sbjct: 306 DLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVF 365
Query: 496 --------VSWNVIIMAYAIHGLGKISIQLFSEMREKGIKPNESTFVSLLSSCSISGMVD 547
VSWN II Y G +++LF M + + T++ L+S + +
Sbjct: 366 NSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLK 425
Query: 548 EGWNYFDSMRKDYGIVPGIEHYGCIIDLLGRIGNLDQAKRFIEEMPSAPTARIWGALLTA 607
G + K GI + +ID+ + G + + + M + T W +++A
Sbjct: 426 FGKGLHSNGIKS-GICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTV-TWNTVISA 483
Query: 608 SRKNNDIVSA 617
+ D +
Sbjct: 484 CVRFGDFATG 493
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 433 bits (1113), Expect = e-120, Method: Compositional matrix adjust.
Identities = 246/738 (33%), Positives = 401/738 (54%), Gaps = 17/738 (2%)
Query: 80 SSGSMESACYLFEKMSYLDTYIWNVVIRGFVDNGLFQEAVEFHHRMVCE----GFKADYF 135
+ G + A LF+ M + WN +IR F DNG +E+ M+ E F D
Sbjct: 234 THGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVA 293
Query: 136 TYPFVIKACAGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERMFDEM 195
T V+ CA + G+ VHG K L+ ++ + N+L+ MY K GC+ A+ +F
Sbjct: 294 TLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMN 353
Query: 196 PVRDTVSWNSMIGGYCSVGDGVSSLVFFKEMQNCG--LRYDRFSLISALGAISIEGCLKI 253
++ VSWN+M+GG+ + GD + ++M G ++ D ++++A+ E L
Sbjct: 354 NNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPS 413
Query: 254 GKEIHCQVIKSGLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVV 313
KE+HC +K + +V + V Y KCG + YA+R+F+ I + + +WNA++GG+
Sbjct: 414 LKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQ 473
Query: 314 NAHFLESFSCLRKMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGFLPNVA 373
+ S +M + L PD T+ +LL +C+KL +L GK +HG+ IR ++
Sbjct: 474 SNDPRLSLDAHLQM-KISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLF 532
Query: 374 LETALIDMYAGSGALKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMELFQDLWSEP 433
+ +++ +Y G L + LF +M +K+LVSWN +I Y++NG A+ +F+ +
Sbjct: 533 VYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYG 592
Query: 434 LKPDAMTFASILPAYAEIATLSDSMQIHSLITKLGLVSNIYISNSIVYMYAKCGDLQTAR 493
++ ++ + A + + +L + H+ K L + +I+ S++ MYAK G + +
Sbjct: 593 IQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSS 652
Query: 494 DV---------VSWNVIIMAYAIHGLGKISIQLFSEMREKGIKPNESTFVSLLSSCSISG 544
V SWN +IM Y IHGL K +I+LF EM+ G P++ TF+ +L++C+ SG
Sbjct: 653 KVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSG 712
Query: 545 MVDEGWNYFDSMRKDYGIVPGIEHYGCIIDLLGRIGNLDQAKRFI-EEMPSAPTARIWGA 603
++ EG Y D M+ +G+ P ++HY C+ID+LGR G LD+A R + EEM IW +
Sbjct: 713 LIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKS 772
Query: 604 LLTASRKNNDIVSAEFAARHVLSSAQDNTGCYVLLSNMYAEAGRWEDVEQIKAIMEKEGL 663
LL++ R + ++ E A + + YVLLSN+YA G+WEDV +++ M + L
Sbjct: 773 LLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSL 832
Query: 664 KKTTGCSMFEKNGETHRFINQDRSHSKTYLIYNVLDILLRKIGEDFYIHNVSKFSPAHLM 723
+K GCS E N + F+ +R I ++ IL KI + Y +
Sbjct: 833 RKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSE 892
Query: 724 KNRAKSPHHHSVRLAISFGLISTSVGNPVLVRNNTRICEDCHSAVKKISEITKRELIVRD 783
+ + + HS +LA+++GLI TS G + V N RIC DCH+A K IS++ +RE++VRD
Sbjct: 893 EEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRD 952
Query: 784 PKCFHHFRNGCCSCGDYW 801
K FHHF+NG CSCGDYW
Sbjct: 953 NKRFHHFKNGVCSCGDYW 970
Score = 248 bits (632), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 157/567 (27%), Positives = 286/567 (50%), Gaps = 19/567 (3%)
Query: 55 NQTITSKKSIGPRNITKTRALQELVSSGSMESACYLFEKMSYLDTYIWNVVIRGFVDNGL 114
+Q ++ + ++ TR + GS + + ++F+ + + + WN VI + N L
Sbjct: 107 HQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNEL 166
Query: 115 FQEAVEFHHRMV-CEGFKADYFTYPFVIKACAGLLYLSEGEKVHGSLFKSGLNSDVYVCN 173
+ E +E M+ D+FTYP VIKACAG+ + G VHG + K+GL DV+V N
Sbjct: 167 YDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGN 226
Query: 174 SLIVMYMKLGCVECAERMFDEMPVRDTVSWNSMIGGYCSVGDGVSSLVFFKEMQ----NC 229
+L+ Y G V A ++FD MP R+ VSWNSMI + G S + EM +
Sbjct: 227 ALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDG 286
Query: 230 GLRYDRFSLISALGAISIEGCLKIGKEIHCQVIKSGLEMDVMVQTSLVDMYGKCGVVDYA 289
D +L++ L + E + +GK +H +K L+ ++++ +L+DMY KCG + A
Sbjct: 287 AFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNA 346
Query: 290 ERLFNMIFPRNIVAWNAMVGGYVVNAHFLESFSCLRKMLE-DDNLNPDCITIINLLPSCT 348
+ +F M +N+V+WN MVGG+ +F LR+ML +++ D +TI+N +P C
Sbjct: 347 QMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCF 406
Query: 349 KLGALLEGKSIHGYAIRKGFLPNVALETALIDMYAGSGALKMTEKLFGSMIEKNLVSWNA 408
L K +H Y++++ F+ N + A + YA G+L +++F + K + SWNA
Sbjct: 407 HESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNA 466
Query: 409 MIAAYVRNGQNREAMELFQDLWSEPLKPDAMTFASILPAYAEIATLSDSMQIHSLITKLG 468
+I + ++ R +++ + L PD+ T S+L A +++ +L ++H I +
Sbjct: 467 LIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNW 526
Query: 469 LVSNIYISNSIVYMYAKCGDLQTA---------RDVVSWNVIIMAYAIHGLGKISIQLFS 519
L ++++ S++ +Y CG+L T + +VSWN +I Y +G ++ +F
Sbjct: 527 LERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFR 586
Query: 520 EMREKGIKPNESTFVSLLSSCSISGMVDEGWNYFDSMRKDYGIVPGIEHYGC-IIDLLGR 578
+M GI+ + + + +CS+ + G K ++ C +ID+ +
Sbjct: 587 QMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKH--LLEDDAFIACSLIDMYAK 644
Query: 579 IGNLDQAKRFIEEMPSAPTARIWGALL 605
G++ Q+ + + TA W A++
Sbjct: 645 NGSITQSSKVFNGLKEKSTAS-WNAMI 670
Score = 135 bits (341), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 108/432 (25%), Positives = 196/432 (45%), Gaps = 30/432 (6%)
Query: 207 IGGYCSVGD------GVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKIGKEIHCQ 260
I +C GD V V E + R +L L A +++G++IH
Sbjct: 50 ISNFCETGDLDKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQL 109
Query: 261 VIKSG-LEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVVNAHFLE 319
V S L D ++ T ++ MY CG D + +F+ + +N+ WNA++ Y N + E
Sbjct: 110 VSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDE 169
Query: 320 SFSCLRKMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGFLPNVALETALI 379
+M+ +L PD T ++ +C + + G ++HG ++ G + +V + AL+
Sbjct: 170 VLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALV 229
Query: 380 DMYAGSGALKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMELFQDLWSE----PLK 435
Y G + +LF M E+NLVSWN+MI + NG + E+ L ++ E
Sbjct: 230 SFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFM 289
Query: 436 PDAMTFASILPAYAEIATLSDSMQIHSLITKLGLVSNIYISNSIVYMYAKCGDLQTA--- 492
PD T ++LP A + +H KL L + ++N+++ MY+KCG + A
Sbjct: 290 PDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMI 349
Query: 493 ------RDVVSWNVIIMAYAIHGLGKISIQLFSEMREKG--IKPNESTFVSLLSSC---S 541
++VVSWN ++ ++ G + + +M G +K +E T ++ + C S
Sbjct: 350 FKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHES 409
Query: 542 ISGMVDEGWNYFDSMRKDYGIVPGIEHYGCIIDLLGRIGNLDQAKRFIEEMPSAPTARIW 601
+ E Y S+++++ + + + + G+L A+R + S T W
Sbjct: 410 FLPSLKELHCY--SLKQEFVYNELVAN--AFVASYAKCGSLSYAQRVFHGIRS-KTVNSW 464
Query: 602 GALLTASRKNND 613
AL+ ++ND
Sbjct: 465 NALIGGHAQSND 476
Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 101/215 (46%), Gaps = 1/215 (0%)
Query: 79 VSSGSMESACYLFEKMSYLDTYIWNVVIRGFVDNGLFQEAVEFHHRMVCEGFKADYFTYP 138
+ G + + LF+ M WN VI G++ NG A+ +MV G + +
Sbjct: 542 IHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMM 601
Query: 139 FVIKACAGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPVR 198
V AC+ L L G + H K L D ++ SLI MY K G + + ++F+ + +
Sbjct: 602 PVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEK 661
Query: 199 DTVSWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKIGKEIH 258
T SWN+MI GY G ++ F+EMQ G D + + L A + G + G
Sbjct: 662 STASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYL 721
Query: 259 CQVIKS-GLEMDVMVQTSLVDMYGKCGVVDYAERL 292
Q+ S GL+ ++ ++DM G+ G +D A R+
Sbjct: 722 DQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRV 756
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 430 bits (1106), Expect = e-119, Method: Compositional matrix adjust.
Identities = 238/707 (33%), Positives = 392/707 (55%), Gaps = 49/707 (6%)
Query: 140 VIKACAGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYM--KLGCVECAERMFDEMPV 197
+I+ C L L ++ HG + ++G SD Y + L M +E A ++FDE+P
Sbjct: 36 LIERCVSLRQL---KQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPK 92
Query: 198 RDTVSWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRY-DRFSLISALGAISIEGCLKIGKE 256
++ +WN++I Y S D V S+ F +M + Y ++++ + A + L +G+
Sbjct: 93 PNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQS 152
Query: 257 IHCQVIKSGLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVVNAH 316
+H +KS + DV V SL+ Y CG +D A ++F I +++V+WN+M+ G+V
Sbjct: 153 LHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGS 212
Query: 317 FLESFSCLRKMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGFLPNVALET 376
++ +KM E +++ +T++ +L +C K+ L G+ + Y N+ L
Sbjct: 213 PDKALELFKKM-ESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLAN 271
Query: 377 ALIDMYAGSGALKMTEKLF-------------------------------GSMIEKNLVS 405
A++DMY G+++ ++LF SM +K++V+
Sbjct: 272 AMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVA 331
Query: 406 WNAMIAAYVRNGQNREAMELFQDL-WSEPLKPDAMTFASILPAYAEIATLSDSMQIHSLI 464
WNA+I+AY +NG+ EA+ +F +L + +K + +T S L A A++ L IHS I
Sbjct: 332 WNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYI 391
Query: 465 TKLGLVSNIYISNSIVYMYAKCGDLQTAR---------DVVSWNVIIMAYAIHGLGKISI 515
K G+ N ++++++++MY+KCGDL+ +R DV W+ +I A+HG G ++
Sbjct: 392 KKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAV 451
Query: 516 QLFSEMREKGIKPNESTFVSLLSSCSISGMVDEGWNYFDSMRKDYGIVPGIEHYGCIIDL 575
+F +M+E +KPN TF ++ +CS +G+VDE + F M +YGIVP +HY CI+D+
Sbjct: 452 DMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDV 511
Query: 576 LGRIGNLDQAKRFIEEMPSAPTARIWGALLTASRKNNDIVSAEFAARHVLSSAQDNTGCY 635
LGR G L++A +FIE MP P+ +WGALL A + + ++ AE A +L N G +
Sbjct: 512 LGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAH 571
Query: 636 VLLSNMYAEAGRWEDVEQIKAIMEKEGLKKTTGCSMFEKNGETHRFINQDRSHSKTYLIY 695
VLLSN+YA+ G+WE+V +++ M GLKK GCS E +G H F++ D +H + +Y
Sbjct: 572 VLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVY 631
Query: 696 NVLDILLRKIGEDFYIHNVSK-FSPAHLMKNRAKSPHHHSVRLAISFGLISTSVGNPVLV 754
L ++ K+ + Y +S+ + + +S + HS +LAI +GLIST + V
Sbjct: 632 GKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRV 691
Query: 755 RNNTRICEDCHSAVKKISEITKRELIVRDPKCFHHFRNGCCSCGDYW 801
N R+C DCHS K IS++ RE+IVRD FHHFRNG CSC D+W
Sbjct: 692 IKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 216 bits (549), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 146/551 (26%), Positives = 265/551 (48%), Gaps = 52/551 (9%)
Query: 2 ATPAPLAIHSHFFNSNSPTRRNPSQKQFKIPETNPTPSFETNARSSKSTHIHKNQTITSK 61
A P L H +F N N PT N + + E + R K TH H +T T
Sbjct: 7 AQPLSLPRHPNFSNPNQPTTNNERSRHISLIERC------VSLRQLKQTHGHMIRTGTFS 60
Query: 62 KSIGPRNITKTRALQELVSSGSMESACYLFEKMSYLDTYIWNVVIRGFVDNGLFQEAVEF 121
P + +K A+ L S S+E A +F+++ +++ WN +IR + ++
Sbjct: 61 D---PYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWA 117
Query: 122 HHRMVCEG-FKADYFTYPFVIKACAGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYM 180
MV E + +T+PF+IKA A + LS G+ +HG KS + SDV+V NSLI Y
Sbjct: 118 FLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYF 177
Query: 181 KLGCVECAERMFDEMPVRDTVSWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLIS 240
G ++ A ++F + +D VSWNSMI G+ G +L FK+M++ ++ +++
Sbjct: 178 SCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVG 237
Query: 241 ALGAISIEGCLKIGKEIHCQVIKSGLEMDVMVQTSLVDMYGKCGVVDYAERLF------- 293
L A + L+ G+++ + ++ + +++ + +++DMY KCG ++ A+RLF
Sbjct: 238 VLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKD 297
Query: 294 ------------------------NMIFPRNIVAWNAMVGGYVVNAHFLESFSCLRKMLE 329
N + ++IVAWNA++ Y N E+ ++
Sbjct: 298 NVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQL 357
Query: 330 DDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGFLPNVALETALIDMYAGSGALK 389
N+ + IT+++ L +C ++GAL G+ IH Y + G N + +ALI MY+ G L+
Sbjct: 358 QKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLE 417
Query: 390 MTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMELFQDLWSEPLKPDAMTFASILPAYA 449
+ ++F S+ ++++ W+AMI +G EA+++F + +KP+ +TF ++ A +
Sbjct: 418 KSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACS 477
Query: 450 EIATLSDSMQI-HSLITKLGLVSNIYISNSIVYMYAKCGDLQTARDVVS----------W 498
+ ++ + H + + G+V IV + + G L+ A + W
Sbjct: 478 HTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVW 537
Query: 499 NVIIMAYAIHG 509
++ A IH
Sbjct: 538 GALLGACKIHA 548
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 428 bits (1100), Expect = e-119, Method: Compositional matrix adjust.
Identities = 246/684 (35%), Positives = 375/684 (54%), Gaps = 28/684 (4%)
Query: 140 VIKACAGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPVRD 199
+++ C +G +VH L KSG ++ N LI MY K A ++FD MP R+
Sbjct: 12 ILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERN 71
Query: 200 TVSWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKIGKEIHC 259
VSW++++ G+ GD SL F EM G+ + F+ + L A + L+ G +IH
Sbjct: 72 VVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHG 131
Query: 260 QVIKSGLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYV---VNAH 316
+K G EM V V SLVDMY KCG ++ AE++F I R++++WNAM+ G+V +
Sbjct: 132 FCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSK 191
Query: 317 FLESFSCLRKMLEDDNLN--PDCITIINLLPSCTKLGALLEGKSIHGYAIRKGF-LPNVA 373
L++F M+++ N+ PD T+ +LL +C+ G + GK IHG+ +R GF P+ A
Sbjct: 192 ALDTFG----MMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSA 247
Query: 374 LET-ALIDMYAGSGALKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMELFQDLWSE 432
T +L+D+Y G L K F + EK ++SW+++I Y + G+ EAM LF+ L
Sbjct: 248 TITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQEL 307
Query: 433 PLKPDAMTFASILPAYAEIATLSDSMQIHSLITKLGLVSNIYISNSIVYMYAKCGDLQTA 492
+ D+ +SI+ +A+ A L Q+ +L KL + NS+V MY KCG + A
Sbjct: 308 NSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEA 367
Query: 493 ---------RDVVSWNVIIMAYAIHGLGKISIQLFSEMREKGIKPNESTFVSLLSSCSIS 543
+DV+SW V+I Y HGLGK S+++F EM I+P+E ++++LS+CS S
Sbjct: 368 EKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHS 427
Query: 544 GMVDEGWNYFDSMRKDYGIVPGIEHYGCIIDLLGRIGNLDQAKRFIEEMPSAPTARIWGA 603
GM+ EG F + + +GI P +EHY C++DLLGR G L +AK I+ MP P IW
Sbjct: 428 GMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQT 487
Query: 604 LLTASRKNNDIVSAEFAARHVLSSAQDNTGCYVLLSNMYAEAGRWEDVEQIKAIMEKEGL 663
LL+ R + DI + + +L N YV++SN+Y +AG W + + + +GL
Sbjct: 488 LLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGL 547
Query: 664 KKTTGCSMFEKNGETHRFINQDRSHSKTYLIYNVLDILLRKIGEDF-YIHNVSKFSPAHL 722
KK G S E E H F + + SH T +I L R++ E+ Y++ + H
Sbjct: 548 KKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKH--ELHD 605
Query: 723 MKNRAKSPH--HHSVRLAISFGLISTSV---GNPVLVRNNTRICEDCHSAVKKISEITKR 777
+ + +K + HS +LAI L + + G + V N R+C DCH +K +S+ITK
Sbjct: 606 IDDESKEENLRAHSEKLAIGLALATGGLNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKI 665
Query: 778 ELIVRDPKCFHHFRNGCCSCGDYW 801
+VRD FH F +GCCSCGDYW
Sbjct: 666 AYVVRDAVRFHSFEDGCCSCGDYW 689
Score = 188 bits (478), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 127/469 (27%), Positives = 228/469 (48%), Gaps = 39/469 (8%)
Query: 90 LFEKMSYLDTYIWNVVIRGFVDNGLFQEAVEFHHRMVCEGFKADYFTYPFVIKACAGLLY 149
+F+ M + W+ ++ G V NG + ++ M +G + FT+ +KAC L
Sbjct: 63 VFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNA 122
Query: 150 LSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPVRDTVSWNSMIGG 209
L +G ++HG K G V V NSL+ MY K G + AE++F + R +SWN+MI G
Sbjct: 123 LEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAG 182
Query: 210 YCSVGDGVSSLVFFKEMQNCGL--RYDRFSLISALGAISIEGCLKIGKEIHCQVIKSGLE 267
+ G G +L F MQ + R D F+L S L A S G + GK+IH +++SG
Sbjct: 183 FVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFH 242
Query: 268 M--DVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVVNAHFLESFSCLR 325
+ SLVD+Y KCG + A + F+ I + +++W++++ GY F+E+ L
Sbjct: 243 CPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMG-LF 301
Query: 326 KMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGFLPNVALET----ALIDM 381
K L++ N D + +++ L +GK + A++ LP+ LET +++DM
Sbjct: 302 KRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVK---LPS-GLETSVLNSVVDM 357
Query: 382 YAGSGALKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMELFQDLWSEPLKPDAMTF 441
Y G + EK F M K+++SW +I Y ++G ++++ +F ++ ++PD + +
Sbjct: 358 YLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCY 417
Query: 442 ASILPAYAEIATLSDSMQIHS-LITKLGLVSNIYISNSIVYMYAKCGDLQTARDVVSWNV 500
++L A + + + ++ S L+ G+ + +V + + G L+ A+ ++
Sbjct: 418 LAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLID--- 474
Query: 501 IIMAYAIHGLGKISIQLFSEMREKGIKPNESTFVSLLSSCSISGMVDEG 549
IKPN + +LLS C + G ++ G
Sbjct: 475 ----------------------TMPIKPNVGIWQTLLSLCRVHGDIELG 501
Score = 163 bits (412), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 118/449 (26%), Positives = 225/449 (50%), Gaps = 24/449 (5%)
Query: 234 DRFSLISALGAISIEGCLKIGKEIHCQVIKSGLEMDVMVQTSLVDMYGKCGVVDYAERLF 293
R +L+S L + +G G ++HC ++KSG ++++ L+DMY KC A ++F
Sbjct: 5 QRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVF 64
Query: 294 NMIFPRNIVAWNAMVGGYVVNAHFLESFSCLRKMLEDDNLNPDCITIINLLPSCTKLGAL 353
+ + RN+V+W+A++ G+V+N S S +M + P+ T L +C L AL
Sbjct: 65 DSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEM-GRQGIYPNEFTFSTNLKACGLLNAL 123
Query: 354 LEGKSIHGYAIRKGFLPNVALETALIDMYAGSGALKMTEKLFGSMIEKNLVSWNAMIAAY 413
+G IHG+ ++ GF V + +L+DMY+ G + EK+F +++++L+SWNAMIA +
Sbjct: 124 EKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGF 183
Query: 414 VRNGQNREAMELFQDLWSEPLK--PDAMTFASILPAYAEIATLSDSMQIHSLITKLGL-- 469
V G +A++ F + +K PD T S+L A + + QIH + + G
Sbjct: 184 VHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHC 243
Query: 470 VSNIYISNSIVYMYAKCGDLQTARD---------VVSWNVIIMAYAIHGLGKISIQLFSE 520
S+ I+ S+V +Y KCG L +AR ++SW+ +I+ YA G ++ LF
Sbjct: 244 PSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKR 303
Query: 521 MREKGIKPNESTFVSLLSSCSISGMVDEGWNYFDSMRKDYGIVP-GIEH--YGCIIDLLG 577
++E + + S++ + ++ +G M+ +P G+E ++D+
Sbjct: 304 LQELNSQIDSFALSSIIGVFADFALLRQG----KQMQALAVKLPSGLETSVLNSVVDMYL 359
Query: 578 RIGNLDQAKRFIEEMPSAPTARIWGALLTASRKNN-DIVSAEFAARHVLSSAQDNTGCYV 636
+ G +D+A++ EM W ++T K+ S + + + + CY+
Sbjct: 360 KCGLVDEAEKCFAEMQLKDVIS-WTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYL 418
Query: 637 LLSNMYAEAGRWEDVEQI-KAIMEKEGLK 664
+ + + +G ++ E++ ++E G+K
Sbjct: 419 AVLSACSHSGMIKEGEELFSKLLETHGIK 447
Score = 150 bits (378), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 187/365 (51%), Gaps = 15/365 (4%)
Query: 82 GSMESACYLFEKMSYLDTYIWNVVIRGFVDNGLFQEAVEFHHRMVCEGFKA--DYFTYPF 139
G + A +F ++ WN +I GFV G +A++ M K D FT
Sbjct: 156 GRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTS 215
Query: 140 VIKACAGLLYLSEGEKVHGSLFKSGLN--SDVYVCNSLIVMYMKLGCVECAERMFDEMPV 197
++KAC+ + G+++HG L +SG + S + SL+ +Y+K G + A + FD++
Sbjct: 216 LLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKE 275
Query: 198 RDTVSWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKIGKEI 257
+ +SW+S+I GY G+ V ++ FK +Q + D F+L S +G + L+ GK++
Sbjct: 276 KTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQM 335
Query: 258 HCQVIK--SGLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVVNA 315
+K SGLE V+ S+VDMY KCG+VD AE+ F + +++++W ++ GY +
Sbjct: 336 QALAVKLPSGLETSVL--NSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHG 393
Query: 316 HFLESFSCLRKMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRK-GFLPNVAL 374
+S +ML N+ PD + + +L +C+ G + EG+ + + G P V
Sbjct: 394 LGKKSVRIFYEMLR-HNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEH 452
Query: 375 ETALIDMYAGSGALKMTEKLFGSM-IEKNLVSWNAMIAAYVRNGQNREAMELFQDLWSEP 433
++D+ +G LK + L +M I+ N+ W +++ +G +EL +++
Sbjct: 453 YACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGD----IELGKEVGKIL 508
Query: 434 LKPDA 438
L+ DA
Sbjct: 509 LRIDA 513
Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 120/246 (48%), Gaps = 3/246 (1%)
Query: 66 PRNITKTRALQEL-VSSGSMESACYLFEKMSYLDTYIWNVVIRGFVDNGLFQEAVEFHHR 124
P + T T +L +L V G + SA F+++ W+ +I G+ G F EA+ R
Sbjct: 244 PSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKR 303
Query: 125 MVCEGFKADYFTYPFVIKACAGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGC 184
+ + D F +I A L +G+++ K + V NS++ MY+K G
Sbjct: 304 LQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGL 363
Query: 185 VECAERMFDEMPVRDTVSWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGA 244
V+ AE+ F EM ++D +SW +I GY G G S+ F EM + D ++ L A
Sbjct: 364 VDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSA 423
Query: 245 ISIEGCLKIGKEIHCQVIKS-GLEMDVMVQTSLVDMYGKCGVVDYAERLFN-MIFPRNIV 302
S G +K G+E+ +++++ G++ V +VD+ G+ G + A+ L + M N+
Sbjct: 424 CSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVG 483
Query: 303 AWNAMV 308
W ++
Sbjct: 484 IWQTLL 489
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 426 bits (1096), Expect = e-118, Method: Compositional matrix adjust.
Identities = 238/707 (33%), Positives = 390/707 (55%), Gaps = 20/707 (2%)
Query: 109 FVDNGLFQEAVEFHHRMVCEGFKADYFTYPFVIKACAGLLYLSEGEKVHGSLFKSGLNSD 168
++ +G + ++ MV + D T+ ++ + L+ G++VH K GL+
Sbjct: 290 YLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLM 349
Query: 169 VYVCNSLIVMYMKLGCVECAERMFDEMPVRDTVSWNSMIGGYCSVGDGVSSLVFFKEMQN 228
+ V NSLI MY KL A +FD M RD +SWNS+I G G V ++ F ++
Sbjct: 350 LTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLR 409
Query: 229 CGLRYDRFSLISAL-GAISIEGCLKIGKEIHCQVIKSGLEMDVMVQTSLVDMYGKCGVVD 287
CGL+ D++++ S L A S+ L + K++H IK D V T+L+D Y + +
Sbjct: 410 CGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMK 469
Query: 288 YAERLFNMIFPRNIVAWNAMVGGYVV--NAH-FLESFSCLRKMLEDDNLNPDCITIINLL 344
AE LF ++VAWNAM+ GY + H L+ F+ + K E D T+ +
Sbjct: 470 EAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGE----RSDDFTLATVF 524
Query: 345 PSCTKLGALLEGKSIHGYAIRKGFLPNVALETALIDMYAGSGALKMTEKLFGSMIEKNLV 404
+C L A+ +GK +H YAI+ G+ ++ + + ++DMY G + + F S+ + V
Sbjct: 525 KTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDV 584
Query: 405 SWNAMIAAYVRNGQNREAMELFQDLWSEPLKPDAMTFASILPAYAEIATLSDSMQIHSLI 464
+W MI+ + NG+ A +F + + PD T A++ A + + L QIH+
Sbjct: 585 AWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANA 644
Query: 465 TKLGLVSNIYISNSIVYMYAKCGDLQTA---------RDVVSWNVIIMAYAIHGLGKISI 515
KL ++ ++ S+V MYAKCG + A ++ +WN +++ A HG GK ++
Sbjct: 645 LKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETL 704
Query: 516 QLFSEMREKGIKPNESTFVSLLSSCSISGMVDEGWNYFDSMRKDYGIVPGIEHYGCIIDL 575
QLF +M+ GIKP++ TF+ +LS+CS SG+V E + + SM DYGI P IEHY C+ D
Sbjct: 705 QLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADA 764
Query: 576 LGRIGNLDQAKRFIEEMPSAPTARIWGALLTASRKNNDIVSAEFAARHVLSSAQDNTGCY 635
LGR G + QA+ IE M +A ++ LL A R D + + A +L ++ Y
Sbjct: 765 LGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAY 824
Query: 636 VLLSNMYAEAGRWEDVEQIKAIMEKEGLKKTTGCSMFEKNGETHRFINQDRSHSKTYLIY 695
VLLSNMYA A +W++++ + +M+ +KK G S E + H F+ DRS+ +T LIY
Sbjct: 825 VLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIY 884
Query: 696 NVLDILLRKIGEDFYIHNVSKFSPAHL-MKNRAKSPHHHSVRLAISFGLISTSVGNPVLV 754
+ ++R I ++ Y+ + F+ + + + ++ ++HS +LA++FGL+ST P+ V
Sbjct: 885 RKVKDMIRDIKQEGYVPE-TDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRV 943
Query: 755 RNNTRICEDCHSAVKKISEITKRELIVRDPKCFHHFRNGCCSCGDYW 801
N R+C DCH+A+K I+++ RE+++RD FH F++G CSCGDYW
Sbjct: 944 IKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 199 bits (505), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 142/461 (30%), Positives = 227/461 (49%), Gaps = 27/461 (5%)
Query: 90 LFEKMSYLDTYIWNVVIRGFVDNGLFQEAVEFHHRMVCEGFKADYFTYPFVIKACAGLLY 149
+F+ MS D WN VI G NGL EAV +++ G K D +T V+KA + L
Sbjct: 372 VFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPE 431
Query: 150 -LSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPVRDTVSWNSMIG 208
LS ++VH K SD +V +LI Y + C++ AE +F+ D V+WN+M+
Sbjct: 432 GLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF-DLVAWNAMMA 490
Query: 209 GYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKIGKEIHCQVIKSGLEM 268
GY DG +L F M G R D F+L + + GK++H IKSG ++
Sbjct: 491 GYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDL 550
Query: 269 DVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVVNAHFLESFSCLRKML 328
D+ V + ++DMY KCG + A+ F+ I + VAW M+ G + N +F +M
Sbjct: 551 DLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMR 610
Query: 329 EDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGFLPNVALETALIDMYAGSGAL 388
L PD TI L + + L AL +G+ IH A++ + + T+L+DMYA G++
Sbjct: 611 LMGVL-PDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSI 669
Query: 389 KMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMELFQDLWSEPLKPDAMTFASILPAY 448
LF + N+ +WNAM+ ++G+ +E ++LF+ + S +KPD +TF +L A
Sbjct: 670 DDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSAC 729
Query: 449 AEIATLSDSMQIHSLITKLGLVSNIYISNSIVYMYAKCGDLQTARDVVSWNVIIMAYAIH 508
+ HS GLVS Y +M + GD ++ ++ + A
Sbjct: 730 S-----------HS-----GLVSEAY-----KHMRSMHGDYGIKPEIEHYSCLADALGRA 768
Query: 509 GLGKISIQLFSEMREKGIKPNESTFVSLLSSCSISGMVDEG 549
GL K + L M ++ + S + +LL++C + G + G
Sbjct: 769 GLVKQAENLIESM---SMEASASMYRTLLAACRVQGDTETG 806
Score = 170 bits (431), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 123/414 (29%), Positives = 200/414 (48%), Gaps = 26/414 (6%)
Query: 47 SKSTHIHKNQTITSKKSIGPRNITKTRALQELVSSGS----MESACYLFEKMSYLDTYIW 102
SK H+H +I N++ + L+ + S M+ A LFE+ ++ D W
Sbjct: 436 SKQVHVH---------AIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF-DLVAW 485
Query: 103 NVVIRGFVDNGLFQEAVEFHHRMVCEGFKADYFTYPFVIKACAGLLYLSEGEKVHGSLFK 162
N ++ G+ + + ++ M +G ++D FT V K C L +++G++VH K
Sbjct: 486 NAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIK 545
Query: 163 SGLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPVRDTVSWNSMIGGYCSVGDGVSSLVF 222
SG + D++V + ++ MY+K G + A+ FD +PV D V+W +MI G G+ +
Sbjct: 546 SGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHV 605
Query: 223 FKEMQNCGLRYDRFSLISALGAISIEGCLKIGKEIHCQVIKSGLEMDVMVQTSLVDMYGK 282
F +M+ G+ D F++ + A S L+ G++IH +K D V TSLVDMY K
Sbjct: 606 FSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAK 665
Query: 283 CGVVDYAERLFNMIFPRNIVAWNAMVGGYVVNAHFLESFSCLRKMLEDDNLNPDCITIIN 342
CG +D A LF I NI AWNAM+ G + E+ ++M + + PD +T I
Sbjct: 666 CGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQM-KSLGIKPDKVTFIG 724
Query: 343 LLPSCTKLGALLEG----KSIHG-YAIRKGFLPNVALETALIDMYAGSGALKMTEKLFGS 397
+L +C+ G + E +S+HG Y I+ P + + L D +G +K E L S
Sbjct: 725 VLSACSHSGLVSEAYKHMRSMHGDYGIK----PEIEHYSCLADALGRAGLVKQAENLIES 780
Query: 398 M-IEKNLVSWNAMIAAYVRNGQNREAMELFQDLWS-EPLKPDAMTFASILPAYA 449
M +E + + ++AA G + L EPL A S + A A
Sbjct: 781 MSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAA 834
Score = 168 bits (425), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 123/515 (23%), Positives = 240/515 (46%), Gaps = 47/515 (9%)
Query: 82 GSMESACYLFEKMSYLDTYIWNVVIRGFVDNGLFQEAVEFHHRMVCEGFKADYFTYPFVI 141
G ++ LFE+M Y D +WN++++ +++ G +EA++ G + T +
Sbjct: 194 GKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLA 253
Query: 142 KACAGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPVRDTV 201
+ SG +SD G V+ D V + +
Sbjct: 254 RI-------------------SGDDSDA-------------GQVKSFANGNDASSVSEII 281
Query: 202 SWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKIGKEIHCQV 261
N + Y G + L F +M + D+ + I L L +G+++HC
Sbjct: 282 FRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMA 341
Query: 262 IKSGLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVVNAHFLESF 321
+K GL++ + V SL++MY K +A +F+ + R++++WN+++ G N +E+
Sbjct: 342 LKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAV 401
Query: 322 SCLRKMLEDDNLNPDCITIINLLPSCTKLGALLE-GKSIHGYAIRKGFLPNVALETALID 380
CL L L PD T+ ++L + + L L K +H +AI+ + + + TALID
Sbjct: 402 -CLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALID 460
Query: 381 MYAGSGALKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMELFQDLWSEPLKPDAMT 440
Y+ + +K E LF +LV+WNAM+A Y ++ + ++LF + + + D T
Sbjct: 461 AYSRNRCMKEAEILFERH-NFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFT 519
Query: 441 FASILPAYAEIATLSDSMQIHSLITKLGLVSNIYISNSIVYMYAKCGDLQTAR------- 493
A++ + ++ Q+H+ K G ++++S+ I+ MY KCGD+ A+
Sbjct: 520 LATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIP 579
Query: 494 --DVVSWNVIIMAYAIHGLGKISIQLFSEMREKGIKPNESTFVSLLSSCSISGMVDEGWN 551
D V+W +I +G + + +FS+MR G+ P+E T +L + S +++G
Sbjct: 580 VPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQ 639
Query: 552 -YFDSMRKDYGIVPGIEHYGCIIDLLGRIGNLDQA 585
+ ++++ + P + ++D+ + G++D A
Sbjct: 640 IHANALKLNCTNDPFVG--TSLVDMYAKCGSIDDA 672
Score = 157 bits (398), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 139/563 (24%), Positives = 247/563 (43%), Gaps = 61/563 (10%)
Query: 82 GSMESACYLFEKMSYLDTYIWNVVIRGFVDNGL-----FQEAVEFHHRMVCEGFKADYFT 136
GS+ A +F+KM D WN ++ + + Q+A + + T
Sbjct: 88 GSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMT 147
Query: 137 YPFVIKACAGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERMFDEMP 196
++K C Y+ E HG K GL+ D +V +L+ +Y+K G V+ + +F+EMP
Sbjct: 148 LSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMP 207
Query: 197 VRDTVSWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKIGKE 256
RD V WN M+ Y +G FKE D S + G E L++
Sbjct: 208 YRDVVLWNLMLKAYLEMG--------FKEEA-----IDLSSAFHSSGLNPNEITLRLLAR 254
Query: 257 IHCQVIKSGLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVVNAH 316
I SG + D S + V + I+ N + Y+ +
Sbjct: 255 I------SGDDSDAGQVKSFANGNDASSVSE-------------IIFRNKGLSEYLHSGQ 295
Query: 317 FLESFSCLRKMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGFLPNVALET 376
+ C M+E D + D +T I +L + K+ +L G+ +H A++ G + +
Sbjct: 296 YSALLKCFADMVESD-VECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSN 354
Query: 377 ALIDMYAGSGALKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMELFQDLWSEPLKP 436
+LI+MY +F +M E++L+SWN++IA +NG EA+ LF L LKP
Sbjct: 355 SLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKP 414
Query: 437 DAMTFASILPAYAEIAT-LSDSMQIHSLITKLGLVSNIYISNSIVYMYAKCGDLQTAR-- 493
D T S+L A + + LS S Q+H K+ VS+ ++S +++ Y++ ++ A
Sbjct: 415 DQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEIL 474
Query: 494 ------DVVSWNVIIMAYAIHGLGKISIQLFSEMREKGIKPNESTFVSLLSSCSISGMVD 547
D+V+WN ++ Y G +++LF+ M ++G + ++ T ++ +C ++
Sbjct: 475 FERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAIN 534
Query: 548 EGWNYFDSMRKDYGIVPGIEH----YGCIIDLLGRIGNLDQAKRFIEEMPSAPTARIWGA 603
+G Y I G + I+D+ + G++ A+ + +P P W
Sbjct: 535 QG-----KQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIP-VPDDVAWTT 588
Query: 604 LLTASRKNNDIVSAEFAARHVLS 626
+++ +N + E A HV S
Sbjct: 589 MISGCIENGE----EERAFHVFS 607
Score = 139 bits (350), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 108/403 (26%), Positives = 184/403 (45%), Gaps = 47/403 (11%)
Query: 153 GEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPVRDTVSWNSMIGGY-- 210
G+ H + N + ++ N+LI MY K G + A R+FD+MP RD VSWNS++ Y
Sbjct: 58 GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQ 117
Query: 211 ---CSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKIGKEIHCQVIKSGLE 267
C V + + + F+ ++ + R +L L G + + H K GL+
Sbjct: 118 SSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLD 177
Query: 268 MDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVVNAHFLESFSCLRKM 327
D V +LV++Y K G V + LF + R++V WN M+ Y + F E L
Sbjct: 178 GDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAY-LEMGFKEEAIDLSSA 236
Query: 328 LEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGFLPNVALETALIDMYAGSGA 387
LNP+ IT+ +L A + G ++ G+ A
Sbjct: 237 FHSSGLNPNEITL--------RLLARISGDDSDAGQVKS--------------FANGNDA 274
Query: 388 LKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMELFQDLWSEPLKPDAMTFASILPA 447
++E +F N ++ Y+ +GQ ++ F D+ ++ D +TF +L
Sbjct: 275 SSVSEIIFR----------NKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLAT 324
Query: 448 YAEIATLSDSMQIHSLITKLGLVSNIYISNSIVYMYAKCG---------DLQTARDVVSW 498
++ +L+ Q+H + KLGL + +SNS++ MY K D + RD++SW
Sbjct: 325 AVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISW 384
Query: 499 NVIIMAYAIHGLGKISIQLFSEMREKGIKPNESTFVSLLSSCS 541
N +I A +GL ++ LF ++ G+KP++ T S+L + S
Sbjct: 385 NSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAAS 427
Score = 97.8 bits (242), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 140/295 (47%), Gaps = 31/295 (10%)
Query: 251 LKIGKEIHCQVIKSGLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGG 310
L +GK H +++ + + +L+ MY KCG + YA R+F+ + R++V+WN+++
Sbjct: 55 LMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAA 114
Query: 311 YV-----VNAHFLESFSCLRKMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIR 365
Y V + ++F R +L D + +T+ +L C G + +S HGYA +
Sbjct: 115 YAQSSECVVENIQQAFLLFR-ILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACK 173
Query: 366 KGFLPNVALETALIDMYAGSGALKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMEL 425
G + + AL+++Y G +K + LF M +++V WN M+ AY+ G EA++L
Sbjct: 174 IGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDL 233
Query: 426 FQDLWSEPLKPDAMTFASILPAYAEIA-TLSDSMQIHSLITKLGLVSNIYISNSIVYMYA 484
S L P+ +T L A I+ SD+ Q+ S +A
Sbjct: 234 SSAFHSSGLNPNEIT----LRLLARISGDDSDAGQVKS--------------------FA 269
Query: 485 KCGDLQTARDVVSWNVIIMAYAIHGLGKISIQLFSEMREKGIKPNESTFVSLLSS 539
D + +++ N + Y G ++ F++M E ++ ++ TF+ +L++
Sbjct: 270 NGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLAT 324
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 424 bits (1090), Expect = e-117, Method: Compositional matrix adjust.
Identities = 237/727 (32%), Positives = 398/727 (54%), Gaps = 23/727 (3%)
Query: 90 LFEKMSYLDTYIWNVVIRGFVDNGLFQEAVEFHHRMVCEGFKADYFTYPFVIKACAGLLY 149
+F++M + W +I G+ N + E + RM EG + + FT+ + A
Sbjct: 150 VFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGV 209
Query: 150 LSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPVRDTVSWNSMIGG 209
G +VH + K+GL+ + V NSLI +Y+K G V A +FD+ V+ V+WNSMI G
Sbjct: 210 GGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISG 269
Query: 210 YCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKIGKEIHCQVIKSGLEMD 269
Y + G + +L F M+ +R S S + + L+ +++HC V+K G D
Sbjct: 270 YAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFD 329
Query: 270 VMVQTSLVDMYGKCGVVDYAERLFNMI-FPRNIVAWNAMVGGYVVNAHFLESFSCLRKML 328
++T+L+ Y KC + A RLF I N+V+W AM+ G++ N E+ +M
Sbjct: 330 QNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEM- 388
Query: 329 EDDNLNPDCIT---IINLLPSCTKLGALLEGKSIHGYAIRKGFLPNVALETALIDMYAGS 385
+ + P+ T I+ LP ++ +H ++ + + + TAL+D Y
Sbjct: 389 KRKGVRPNEFTYSVILTALP-------VISPSEVHAQVVKTNYERSSTVGTALLDAYVKL 441
Query: 386 GALKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMELFQDLWSEPLKPDAMTFASIL 445
G ++ K+F + +K++V+W+AM+A Y + G+ A+++F +L +KP+ TF+SIL
Sbjct: 442 GKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSIL 501
Query: 446 PAYAEI-ATLSDSMQIHSLITKLGLVSNIYISNSIVYMYAKCGDLQTA---------RDV 495
A A++ Q H K L S++ +S++++ MYAK G++++A +D+
Sbjct: 502 NVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDL 561
Query: 496 VSWNVIIMAYAIHGLGKISIQLFSEMREKGIKPNESTFVSLLSSCSISGMVDEGWNYFDS 555
VSWN +I YA HG ++ +F EM+++ +K + TF+ + ++C+ +G+V+EG YFD
Sbjct: 562 VSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDI 621
Query: 556 MRKDYGIVPGIEHYGCIIDLLGRIGNLDQAKRFIEEMPSAPTARIWGALLTASRKNNDIV 615
M +D I P EH C++DL R G L++A + IE MP+ + IW +L A R +
Sbjct: 622 MVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTE 681
Query: 616 SAEFAARHVLSSAQDNTGCYVLLSNMYAEAGRWEDVEQIKAIMEKEGLKKTTGCSMFEKN 675
AA +++ +++ YVLLSNMYAE+G W++ +++ +M + +KK G S E
Sbjct: 682 LGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVK 741
Query: 676 GETHRFINQDRSHSKTYLIYNVLDILLRKIGEDFYIHNVSKFSPAHLMKNRAKSPHHHSV 735
+T+ F+ DRSH IY L+ L ++ + Y + S +++ HS
Sbjct: 742 NKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSE 801
Query: 736 RLAISFGLISTSVGNPVLVRNNTRICEDCHSAVKKISEITKRELIVRDPKCFHHF-RNGC 794
RLAI+FGLI+T G+P+L+ N R+C DCH +K I++I +RE++VRD FHHF +G
Sbjct: 802 RLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGV 861
Query: 795 CSCGDYW 801
CSCGD+W
Sbjct: 862 CSCGDFW 868
Score = 216 bits (550), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 143/479 (29%), Positives = 245/479 (51%), Gaps = 23/479 (4%)
Query: 79 VSSGSMESACYLFEKMSYLDTYIWNVVIRGFVDNGLFQEAVEFH---HRMVCEGFKADYF 135
VSS + +A LF+K D + ++ GF +G QEA HR+ G + D
Sbjct: 38 VSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRL---GMEMDCS 94
Query: 136 TYPFVIKACAGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERMFDEM 195
+ V+K A L G ++H K G DV V SL+ YMK + ++FDEM
Sbjct: 95 IFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEM 154
Query: 196 PVRDTVSWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKIGK 255
R+ V+W ++I GY L F MQN G + + F+ +ALG ++ EG G
Sbjct: 155 KERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGL 214
Query: 256 EIHCQVIKSGLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVVNA 315
++H V+K+GL+ + V SL+++Y KCG V A LF+ +++V WN+M+ GY N
Sbjct: 215 QVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANG 274
Query: 316 HFLESFSCLRKM-LEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGFLPNVAL 374
LE+ M L L+ + +++ C L L + +H ++ GFL + +
Sbjct: 275 LDLEALGMFYSMRLNYVRLSES--SFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNI 332
Query: 375 ETALIDMYAGSGALKMTEKLFGSM-IEKNLVSWNAMIAAYVRNGQNREAMELFQDLWSEP 433
TAL+ Y+ A+ +LF + N+VSW AMI+ +++N EA++LF ++ +
Sbjct: 333 RTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKG 392
Query: 434 LKPDAMTFASILPAYAEIATLSDSMQIHSLITKLGLVSNIYISNSIVYMYAKCGDLQTA- 492
++P+ T++ IL A I+ ++H+ + K + + +++ Y K G ++ A
Sbjct: 393 VRPNEFTYSVILTALPVIS----PSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAA 448
Query: 493 --------RDVVSWNVIIMAYAIHGLGKISIQLFSEMREKGIKPNESTFVSLLSSCSIS 543
+D+V+W+ ++ YA G + +I++F E+ + GIKPNE TF S+L+ C+ +
Sbjct: 449 KVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAAT 507
Score = 108 bits (271), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 118/252 (46%), Gaps = 23/252 (9%)
Query: 72 TRALQELVSSGSMESACYLFEKMSYLDTYIWNVVIRGFVDNGLFQEAVEFHHRMVCEGFK 131
T L V G +E A +F + D W+ ++ G+ G + A++ + G K
Sbjct: 432 TALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIK 491
Query: 132 ADYFTYPFVIKACAGL-LYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAER 190
+ FT+ ++ CA + +G++ HG KS L+S + V ++L+ MY K G +E AE
Sbjct: 492 PNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEE 551
Query: 191 MFDEMPVRDTVSWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGC 250
+F +D VSWNSMI GY G + +L FKEM+ ++ D + I A + G
Sbjct: 552 VFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGL 611
Query: 251 LKIGKEIHCQVIKSGLEMDVMVQ-----------TSLVDMYGKCGVVDYAERLF-NMIFP 298
++ G++ D+MV+ + +VD+Y + G ++ A ++ NM P
Sbjct: 612 VEEGEKY----------FDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNP 661
Query: 299 RNIVAWNAMVGG 310
W ++
Sbjct: 662 AGSTIWRTILAA 673
Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 106/230 (46%), Gaps = 17/230 (7%)
Query: 394 LFGSMIEKNLVSWNAMIAAYVRNGQNREAMELFQDLWSEPLKPDAMTFASILPAYAEIAT 453
LF ++ S+ +++ + R+G+ +EA LF ++ ++ D F+S+L A T
Sbjct: 49 LFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSA---T 105
Query: 454 LSDSM---QIHSLITKLGLVSNIYISNSIVYMYAKCGDLQTAR---------DVVSWNVI 501
L D + Q+H K G + ++ + S+V Y K + + R +VV+W +
Sbjct: 106 LCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTL 165
Query: 502 IMAYAIHGLGKISIQLFSEMREKGIKPNESTFVSLLSSCSISGMVDEGWNYFDSMRKDYG 561
I YA + + + LF M+ +G +PN TF + L + G+ G + K+ G
Sbjct: 166 ISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKN-G 224
Query: 562 IVPGIEHYGCIIDLLGRIGNLDQAKRFIEEMPSAPTARIWGALLTASRKN 611
+ I +I+L + GN+ +A R + + + W ++++ N
Sbjct: 225 LDKTIPVSNSLINLYLKCGNVRKA-RILFDKTEVKSVVTWNSMISGYAAN 273
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 422 bits (1086), Expect = e-117, Method: Compositional matrix adjust.
Identities = 243/662 (36%), Positives = 360/662 (54%), Gaps = 52/662 (7%)
Query: 156 VHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPVRDTVSWNSMIGGYCSVGD 215
VH + L + + L+ Y L V A ++FDE+P R+ + N MI Y + G
Sbjct: 61 VHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGF 120
Query: 216 GVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKIGKEIHCQVIKSGLEMDVMVQTS 275
+ F M C +R D ++ L A S G + IG++IH K GL + V
Sbjct: 121 YGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNG 180
Query: 276 LVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVVNAHFLESFSCLRKMLEDDNLNP 335
LV MYGKCG + A + + + R++V+WN++V GY N F ++ R+M E ++
Sbjct: 181 LVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREM-ESVKISH 239
Query: 336 DCITIINLLPSCTKLGALLEGKSIHGYAIRKGFLPNVALETALIDMYAGSGALKMTEKLF 395
D T+ +LLP+ + N E MY + +F
Sbjct: 240 DAGTMASLLPAVS----------------------NTTTENV---MY--------VKDMF 266
Query: 396 GSMIEKNLVSWNAMIAAYVRNGQNREAMELFQDLWSEPLKPDAMTFASILPAYAEIATLS 455
M +K+LVSWN MI Y++N EA+EL+ + ++ +PDA++ S+LPA + + LS
Sbjct: 267 FKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALS 326
Query: 456 DSMQIHSLITKLGLVSNIYISNSIVYMYAKCGDLQTARDV---------VSWNVIIMAYA 506
+IH I + L+ N+ + N+++ MYAKCG L+ ARDV VSW +I AY
Sbjct: 327 LGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYG 386
Query: 507 IHGLGKISIQLFSEMREKGIKPNESTFVSLLSSCSISGMVDEGWNYFDSMRKDYGIVPGI 566
G G ++ LFS++++ G+ P+ FV+ L++CS +G+++EG + F M Y I P +
Sbjct: 387 FSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRL 446
Query: 567 EHYGCIIDLLGRIGNLDQAKRFIEEMPSAPTARIWGALLTASRKNNDIVSAEFAARHVLS 626
EH C++DLLGR G + +A RFI++M P R+WGALL A R ++D AA +
Sbjct: 447 EHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQ 506
Query: 627 SAQDNTGCYVLLSNMYAEAGRWEDVEQIKAIMEKEGLKKTTGCSMFEKNGETHRFINQDR 686
A + +G YVLLSN+YA+AGRWE+V I+ IM+ +GLKK G S E N H F+ DR
Sbjct: 507 LAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDR 566
Query: 687 SHSKTYLIYNVLDILLRKIGEDFYIHNVSKFSPAHLMKNRAKSPHH--HSVRLAISFGLI 744
SH ++ IY LD+L++K+ E Y+ + S H ++ K H HS +LAI F L+
Sbjct: 567 SHPQSDEIYRELDVLVKKMKELGYVPDSE--SALHDVEEEDKETHLAVHSEKLAIVFALM 624
Query: 745 ST-----SVGNPVLVRNNTRICEDCHSAVKKISEITKRELIVRDPKCFHHFRNGCCSCGD 799
+T N + + N RIC DCH A K IS+IT RE+I+RD FH FR G CSCGD
Sbjct: 625 NTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGD 684
Query: 800 YW 801
YW
Sbjct: 685 YW 686
Score = 213 bits (541), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 151/543 (27%), Positives = 256/543 (47%), Gaps = 63/543 (11%)
Query: 24 PSQKQFKIPETNPT-PSFETNARSSKSTHIHKNQTITSKKSIGPRNITKTRALQELVSSG 82
P ++F+ + + + P E + +S + T Q + + I +R + E +
Sbjct: 14 PKFRKFQSRKVSSSLPKLELDQKSPQETVFLLGQVLDTYPDIRTLRTVHSRIILEDLRCN 73
Query: 83 S---------------MESACYLFEKMSYLDTYIWNVVIRGFVDNGLFQEAVEFHHRMVC 127
S + SA +F+++ + I NV+IR +V+NG + E V+ M
Sbjct: 74 SSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCG 133
Query: 128 EGFKADYFTYPFVIKACAGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVEC 187
+ D++T+P V+KAC+ + G K+HGS K GL+S ++V N L+ MY K G +
Sbjct: 134 CNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSE 193
Query: 188 AERMFDEMPVRDTVSWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISI 247
A + DEM RD VSWNS++ GY +L +EM++ + +D ++ S L A+S
Sbjct: 194 ARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVS- 252
Query: 248 EGCLKIGKEIHCQVIKSGLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAM 307
+ +VM Y + +F + +++V+WN M
Sbjct: 253 ----------------NTTTENVM----------------YVKDMFFKMGKKSLVSWNVM 280
Query: 308 VGGYVVNAHFLESFSCLRKMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKG 367
+G Y+ NA +E+ +M E D PD ++I ++LP+C AL GK IHGY RK
Sbjct: 281 IGVYMKNAMPVEAVELYSRM-EADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKK 339
Query: 368 FLPNVALETALIDMYAGSGALKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMELFQ 427
+PN+ LE ALIDMYA G L+ +F +M +++VSW AMI+AY +G+ +A+ LF
Sbjct: 340 LIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFS 399
Query: 428 DLWSEPLKPDAMTFASILPAYAEIATLSDSMQIHSLITK-LGLVSNIYISNSIVYMYAKC 486
L L PD++ F + L A + L + L+T + + +V + +
Sbjct: 400 KLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRA 459
Query: 487 GDLQTARDVVS----------WNVIIMAYAIHGLGKISIQLFSEMREKGIKPNESTFVSL 536
G ++ A + W ++ A +H I L + + + P +S + L
Sbjct: 460 GKVKEAYRFIQDMSMEPNERVWGALLGACRVH--SDTDIGLLAADKLFQLAPEQSGYYVL 517
Query: 537 LSS 539
LS+
Sbjct: 518 LSN 520
Score = 97.8 bits (242), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 98/194 (50%), Gaps = 9/194 (4%)
Query: 357 KSIHGYAIRKGFLPNVALETALIDMYAGSGALKMTEKLFGSMIEKNLVSWNAMIAAYVRN 416
+++H I + N +L L+ YA + K+F + E+N++ N MI +YV N
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 417 GQNREAMELFQDLWSEPLKPDAMTFASILPAYAEIATLSDSMQIHSLITKLGLVSNIYIS 476
G E +++F + ++PD TF +L A + T+ +IH TK+GL S +++
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVG 178
Query: 477 NSIVYMYAKCGDLQTA---------RDVVSWNVIIMAYAIHGLGKISIQLFSEMREKGIK 527
N +V MY KCG L A RDVVSWN +++ YA + ++++ EM I
Sbjct: 179 NGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKIS 238
Query: 528 PNESTFVSLLSSCS 541
+ T SLL + S
Sbjct: 239 HDAGTMASLLPAVS 252
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 416 bits (1070), Expect = e-115, Method: Compositional matrix adjust.
Identities = 235/674 (34%), Positives = 357/674 (52%), Gaps = 41/674 (6%)
Query: 168 DVYVCNSLIVMYMKLGCVECAERMFDEMPVRDTVSWNSMIGGYCSVG-DGVSSLVFFKEM 226
+++ N+L++ Y K G + E F+++P RD V+WN +I GY G G + + M
Sbjct: 71 NLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM 130
Query: 227 QNCGLRYDRFSLISALGAISIEGCLKIGKEIHCQVIKSGLEMDVMVQTSLVDMYGKCGVV 286
++ R +L++ L S G + +GK+IH QVIK G E ++V + L+ MY G +
Sbjct: 131 RDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCI 190
Query: 287 DYAERLFNMIFPRNIV------------------------------AWNAMVGGYVVNAH 316
A+++F + RN V +W AM+ G N
Sbjct: 191 SDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGL 250
Query: 317 FLESFSCLRKMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGFLPNVALET 376
E+ C R+M + L D ++LP+C LGA+ EGK IH IR F ++ + +
Sbjct: 251 AKEAIECFREM-KVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGS 309
Query: 377 ALIDMYAGSGALKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMELFQDLWSEPLKP 436
ALIDMY L + +F M +KN+VSW AM+ Y + G+ EA+++F D+ + P
Sbjct: 310 ALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDP 369
Query: 437 DAMTFASILPAYAEIATLSDSMQIHSLITKLGLVSNIYISNSIVYMYAKCGDLQTA---- 492
D T + A A +++L + Q H GL+ + +SNS+V +Y KCGD+ +
Sbjct: 370 DHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLF 429
Query: 493 -----RDVVSWNVIIMAYAIHGLGKISIQLFSEMREKGIKPNESTFVSLLSSCSISGMVD 547
RD VSW ++ AYA G +IQLF +M + G+KP+ T ++S+CS +G+V+
Sbjct: 430 NEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVE 489
Query: 548 EGWNYFDSMRKDYGIVPGIEHYGCIIDLLGRIGNLDQAKRFIEEMPSAPTARIWGALLTA 607
+G YF M +YGIVP I HY C+IDL R G L++A RFI MP P A W LL+A
Sbjct: 490 KGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSA 549
Query: 608 SRKNNDIVSAEFAARHVLSSAQDNTGCYVLLSNMYAEAGRWEDVEQIKAIMEKEGLKKTT 667
R ++ ++AA ++ + Y LLS++YA G+W+ V Q++ M ++ +KK
Sbjct: 550 CRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEP 609
Query: 668 GCSMFEKNGETHRFINQDRSHSKTYLIYNVLDILLRKIGEDFYIHNVSKFSPAHLMKNRA 727
G S + G+ H F D S IY L+ L KI ++ Y + S +
Sbjct: 610 GQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKV 669
Query: 728 KSPHHHSVRLAISFGLISTSVGNPVLVRNNTRICEDCHSAVKKISEITKRELIVRDPKCF 787
K ++HS RLAI+FGLI G P+ V N R+C DCH+A K IS +T RE++VRD F
Sbjct: 670 KMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRF 729
Query: 788 HHFRNGCCSCGDYW 801
H F++G CSCGD+W
Sbjct: 730 HRFKDGTCSCGDFW 743
Score = 198 bits (504), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 120/392 (30%), Positives = 203/392 (51%), Gaps = 15/392 (3%)
Query: 78 LVSSGSMESACYLFEKMSYLDTYIWNVVIRGFVDNGLFQEAVEFHHRMVCEGFKADYFTY 137
L++ G +E A LF M D+ W +I+G NGL +EA+E M +G K D + +
Sbjct: 215 LLACGMIEDALQLFRGMEK-DSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPF 273
Query: 138 PFVIKACAGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPV 197
V+ AC GL ++EG+++H + ++ +YV ++LI MY K C+ A+ +FD M
Sbjct: 274 GSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQ 333
Query: 198 RDTVSWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKIGKEI 257
++ VSW +M+ GY G ++ F +MQ G+ D ++L A+ A + L+ G +
Sbjct: 334 KNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQF 393
Query: 258 HCQVIKSGLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVVNAHF 317
H + I SGL V V SLV +YGKCG +D + RLFN + R+ V+W AMV Y
Sbjct: 394 HGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRA 453
Query: 318 LESFSCLRKMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRK-GFLPNVALET 376
+E+ KM++ L PD +T+ ++ +C++ G + +G+ + G +P++ +
Sbjct: 454 VETIQLFDKMVQ-HGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYS 512
Query: 377 ALIDMYAGSGALKMTEKLFGSM-IEKNLVSWNAMIAAYVRNGQNRE----AMELFQDLWS 431
+ID+++ SG L+ + M + + W +++A RN N E A E +L
Sbjct: 513 CMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSA-CRNKGNLEIGKWAAESLIEL-- 569
Query: 432 EPLKPDAMTFASILPA----YAEIATLSDSMQ 459
+P P T S + A + +A L M+
Sbjct: 570 DPHHPAGYTLLSSIYASKGKWDSVAQLRRGMR 601
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 416 bits (1069), Expect = e-115, Method: Compositional matrix adjust.
Identities = 245/770 (31%), Positives = 408/770 (52%), Gaps = 42/770 (5%)
Query: 45 RSSKSTHIHKNQTITSKKSIGPRNITKTR-ALQELVSSGSMESACYLFEKMSYLDTYIWN 103
+ + T I K+QT K G +I + A+ + +G A +F++M + +N
Sbjct: 41 KRATQTQIQKSQTKPLLK-CGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYN 99
Query: 104 VVIRGFVDNGLFQEAVEFHHRMVCEGFKADYFTYPFVIKACAGLLYLSEGEKVHGSLFKS 163
+I G++ NG F E ++ E + D ++ +IK L + + LF+
Sbjct: 100 GMISGYLRNGEF----ELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARE----LFEI 151
Query: 164 GLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPVRDTVSWNSMIGGYCSVGDGVSSLVFF 223
DV N+++ Y + GCV+ A +FD MP ++ VSWN+++ Y + + F
Sbjct: 152 MPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLF 211
Query: 224 KEMQNCGLRYDRFSLISALGAISIEGCLKIGKEIHC-QVIKSGLEMDVMVQTSLVDMYGK 282
K +N L S LG G +K K + Q S DV+ +++ Y +
Sbjct: 212 KSRENWAL----VSWNCLLG-----GFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQ 262
Query: 283 CGVVDYAERLFNMIFPRNIVAWNAMVGGYVVNAHFLESFSCLRKMLEDDNLNPDCITIIN 342
G +D A +LF+ +++ W AMV GY+ N E+ KM E + ++ + +
Sbjct: 263 SGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAM---- 318
Query: 343 LLPSCTKLGALLEGKSIHGYAIRKGFLP--NVALETALIDMYAGSGALKMTEKLFGSMIE 400
L ++G+ + +P NV+ +I YA G + + LF M +
Sbjct: 319 -------LAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPK 371
Query: 401 KNLVSWNAMIAAYVRNGQNREAMELFQDLWSEPLKPDAMTFASILPAYAEIATLSDSMQI 460
++ VSW AMIA Y ++G + EA+ LF + E + + +F+S L A++ L Q+
Sbjct: 372 RDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQL 431
Query: 461 HSLITKLGLVSNIYISNSIVYMYAKCGDLQTA---------RDVVSWNVIIMAYAIHGLG 511
H + K G + ++ N+++ MY KCG ++ A +D+VSWN +I Y+ HG G
Sbjct: 432 HGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFG 491
Query: 512 KISIQLFSEMREKGIKPNESTFVSLLSSCSISGMVDEGWNYFDSMRKDYGIVPGIEHYGC 571
+++++ F M+ +G+KP+++T V++LS+CS +G+VD+G YF +M +DYG++P +HY C
Sbjct: 492 EVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYAC 551
Query: 572 IIDLLGRIGNLDQAKRFIEEMPSAPTARIWGALLTASRKNNDIVSAEFAARHVLSSAQDN 631
++DLLGR G L+ A ++ MP P A IWG LL ASR + + AE AA + + +N
Sbjct: 552 MVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPEN 611
Query: 632 TGCYVLLSNMYAEAGRWEDVEQIKAIMEKEGLKKTTGCSMFEKNGETHRFINQDRSHSKT 691
+G YVLLSN+YA +GRW DV +++ M +G+KK G S E +TH F D H +
Sbjct: 612 SGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEK 671
Query: 692 YLIYNVLDILLRKIGEDFYIHNVSKFSPAHLMKNRAKSPHHHSVRLAISFGLISTSVGNP 751
I+ L+ L ++ + Y+ S + + + +HS RLA+++G++ S G P
Sbjct: 672 DEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRP 731
Query: 752 VLVRNNTRICEDCHSAVKKISEITKRELIVRDPKCFHHFRNGCCSCGDYW 801
+ V N R+CEDCH+A+K ++ IT R +I+RD FHHF++G CSCGDYW
Sbjct: 732 IRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 414 bits (1063), Expect = e-114, Method: Compositional matrix adjust.
Identities = 239/694 (34%), Positives = 376/694 (54%), Gaps = 52/694 (7%)
Query: 156 VHGSLFKSGLNSDVYVCNSLI---VMYMKLGCVECAERMFDEMPVRDTVSWNSMIGGYCS 212
+H + K GL++ Y + LI ++ + A +F + + + WN+M G+
Sbjct: 52 IHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHAL 111
Query: 213 VGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKIGKEIHCQVIKSGLEMDVMV 272
D VS+L + M + GL + ++ L + + K G++IH V+K G ++D+ V
Sbjct: 112 SSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYV 171
Query: 273 QTSLVDMYGKCG----------------VVDY---------------AERLFNMIFPRNI 301
TSL+ MY + G VV Y A++LF+ I +++
Sbjct: 172 HTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDV 231
Query: 302 VAWNAMVGGYVVNAHFLESFSCLRKMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIHG 361
V+WNAM+ GY ++ E+ + M++ N+ PD T++ ++ +C + G++ G+ +H
Sbjct: 232 VSWNAMISGYAETGNYKEALELFKDMMKT-NVRPDESTMVTVVSACAQSGSIELGRQVHL 290
Query: 362 YAIRKGFLPNVALETALIDMYAGSGALKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNRE 421
+ GF N+ + ALID+Y+ G L+ LF + K+++SWN +I Y +E
Sbjct: 291 WIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKE 350
Query: 422 AMELFQDLWSEPLKPDAMTFASILPAYAEIATLSDSMQIHSLITKL--GLVSNIYISNSI 479
A+ LFQ++ P+ +T SILPA A + + IH I K G+ + + S+
Sbjct: 351 ALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSL 410
Query: 480 VYMYAKCGDLQTARDVV---------SWNVIIMAYAIHGLGKISIQLFSEMREKGIKPNE 530
+ MYAKCGD++ A V SWN +I +A+HG S LFS MR+ GI+P++
Sbjct: 411 IDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDD 470
Query: 531 STFVSLLSSCSISGMVDEGWNYFDSMRKDYGIVPGIEHYGCIIDLLGRIGNLDQAKRFIE 590
TFV LLS+CS SGM+D G + F +M +DY + P +EHYGC+IDLLG G +A+ I
Sbjct: 471 ITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMIN 530
Query: 591 EMPSAPTARIWGALLTASRKNNDIVSAEFAARHVLSSAQDNTGCYVLLSNMYAEAGRWED 650
M P IW +LL A + + ++ E A +++ +N G YVLLSN+YA AGRW +
Sbjct: 531 MMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNE 590
Query: 651 VEQIKAIMEKEGLKKTTGCSMFEKNGETHRFINQDRSHSKTYLIYNVL---DILLRKIGE 707
V + +A++ +G+KK GCS E + H FI D+ H + IY +L ++LL K G
Sbjct: 591 VAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAG- 649
Query: 708 DFYIHNVSKFSPAHLMKNRAKSPHHHSVRLAISFGLISTSVGNPVLVRNNTRICEDCHSA 767
++ + S+ + + + HHS +LAI+FGLIST G + + N R+C +CH A
Sbjct: 650 --FVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEA 707
Query: 768 VKKISEITKRELIVRDPKCFHHFRNGCCSCGDYW 801
K IS+I KRE+I RD FHHFR+G CSC DYW
Sbjct: 708 TKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 231 bits (589), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 141/507 (27%), Positives = 257/507 (50%), Gaps = 51/507 (10%)
Query: 1 MATPAPLAIHS-----HFFNSNSPTRRNPSQKQFKIPETNPTPSFETNARSSKSTHIHKN 55
M + +PL + S HF P+ +P + +P+ S N ++ +S I
Sbjct: 2 MLSCSPLTVPSSSYPFHFL----PSSSDPPYDSIR---NHPSLSLLHNCKTLQSLRIIHA 54
Query: 56 QTITSKKSIGPRNITKTRALQELVSSGSMESACY---LFEKMSYLDTYIWNVVIRGFVDN 112
Q I K + N ++ ++ + S E Y +F+ + + IWN + RG +
Sbjct: 55 QMI--KIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALS 112
Query: 113 GLFQEAVEFHHRMVCEGFKADYFTYPFVIKACAGLLYLSEGEKVHGSLFKSGLNSDVYVC 172
A++ + M+ G + +T+PFV+K+CA EG+++HG + K G + D+YV
Sbjct: 113 SDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVH 172
Query: 173 NSLIVMYMK-------------------------------LGCVECAERMFDEMPVRDTV 201
SLI MY++ G +E A+++FDE+PV+D V
Sbjct: 173 TSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVV 232
Query: 202 SWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKIGKEIHCQV 261
SWN+MI GY G+ +L FK+M +R D ++++ + A + G +++G+++H +
Sbjct: 233 SWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWI 292
Query: 262 IKSGLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVVNAHFLESF 321
G ++ + +L+D+Y KCG ++ A LF + +++++WN ++GGY + E+
Sbjct: 293 DDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEAL 352
Query: 322 SCLRKMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIR--KGFLPNVALETALI 379
++ML P+ +T++++LP+C LGA+ G+ IH Y + KG +L T+LI
Sbjct: 353 LLFQEMLRSGE-TPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLI 411
Query: 380 DMYAGSGALKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMELFQDLWSEPLKPDAM 439
DMYA G ++ ++F S++ K+L SWNAMI + +G+ + +LF + ++PD +
Sbjct: 412 DMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDI 471
Query: 440 TFASILPAYAEIATLSDSMQIHSLITK 466
TF +L A + L I +T+
Sbjct: 472 TFVGLLSACSHSGMLDLGRHIFRTMTQ 498
Score = 168 bits (426), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 117/407 (28%), Positives = 206/407 (50%), Gaps = 10/407 (2%)
Query: 69 ITKTRALQELVSSGSMESACYLFEKMSYLDTYIWNVVIRGFVDNGLFQEAVEFHHRMVCE 128
++ T ++ S G +E+A LF+++ D WN +I G+ + G ++EA+E M+
Sbjct: 201 VSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKT 260
Query: 129 GFKADYFTYPFVIKACAGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECA 188
+ D T V+ ACA + G +VH + G S++ + N+LI +Y K G +E A
Sbjct: 261 NVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETA 320
Query: 189 ERMFDEMPVRDTVSWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIE 248
+F+ +P +D +SWN++IGGY + +L+ F+EM G + +++S L A +
Sbjct: 321 CGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHL 380
Query: 249 GCLKIGKEIHCQVIK--SGLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNA 306
G + IG+ IH + K G+ ++TSL+DMY KCG ++ A ++FN I +++ +WNA
Sbjct: 381 GAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNA 440
Query: 307 MVGGYVVNAHFLESFSCLRKMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRK 366
M+ G+ ++ SF +M + PD IT + LL +C+ G L G+ I +
Sbjct: 441 MIFGFAMHGRADASFDLFSRM-RKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQD 499
Query: 367 -GFLPNVALETALIDMYAGSGALK-MTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAME 424
P + +ID+ SG K E + +E + V W +++ A +G N E E
Sbjct: 500 YKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHG-NVELGE 558
Query: 425 LFQD--LWSEPLKPDAMTFASILPAYAEIATLSDSMQIHSLITKLGL 469
F + + EP P + S + YA ++ + +L+ G+
Sbjct: 559 SFAENLIKIEPENPGSYVLLSNI--YASAGRWNEVAKTRALLNDKGM 603
>sp|Q9SV26|PP297_ARATH Pentatricopeptide repeat-containing protein At4g01030,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H65 PE=3
SV=2
Length = 768
Score = 413 bits (1062), Expect = e-114, Method: Compositional matrix adjust.
Identities = 245/763 (32%), Positives = 389/763 (50%), Gaps = 76/763 (9%)
Query: 83 SMESACYLFEKMSYLDTYIWNVVIRGFVDNGLFQEAVEFHHRMVCEGFKADYFTYPFVIK 142
S+ A LF++M D WN ++ + +G +++AVE M G KA T +++
Sbjct: 38 SLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQ 97
Query: 143 ACAGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPVR---- 198
C+ +EG ++HG + + GL S+V +CNSLIVMY + G +E + ++F+ M R
Sbjct: 98 VCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSS 157
Query: 199 -------------------------------DTVSWNSMIGGYCSVGDGVSSLVFFKEMQ 227
D V+WNS++ GY S G ++ K MQ
Sbjct: 158 WNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQ 217
Query: 228 NCGLRYDRFSLISALGAISIEGCLKIGKEIHCQVIKSGLEMDVMVQTSLVDMYGKCGVVD 287
GL+ S+ S L A++ G LK+GK IH ++++ L DV V+T+L+DMY K G +
Sbjct: 218 IAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLP 277
Query: 288 YAERLFNMIFPRNIVAWNAMVGGYVVNAHFLESFSCLRKMLEDDNLNPDCITIINLLPSC 347
YA +F+M+ +NIVAWN++V G + A L+ L +E + + PD IT +L
Sbjct: 278 YARMVFDMMDAKNIVAWNSLVSG-LSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGY 336
Query: 348 TKLGALLEGKSIHGYAIRKGFLPNVALETALIDMYAGSGALKMTEKLFGSMIEKNLVSWN 407
LG + + G KG PNV VSW
Sbjct: 337 ATLGKPEKALDVIGKMKEKGVAPNV-------------------------------VSWT 365
Query: 408 AMIAAYVRNGQNREAMELFQDLWSEPLKPDAMTFASILPAYAEIATLSDSMQIHSLITKL 467
A+ + +NG R A+++F + E + P+A T +++L ++ L ++H +
Sbjct: 366 AIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRK 425
Query: 468 GLVSNIYISNSIVYMYAKCGDLQTA---------RDVVSWNVIIMAYAIHGLGKISIQLF 518
L+ + Y++ ++V MY K GDLQ+A + + SWN ++M YA+ G G+ I F
Sbjct: 426 NLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAF 485
Query: 519 SEMREKGIKPNESTFVSLLSSCSISGMVDEGWNYFDSMRKDYGIVPGIEHYGCIIDLLGR 578
S M E G++P+ TF S+LS C SG+V EGW YFD MR YGI+P IEH C++DLLGR
Sbjct: 486 SVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGR 545
Query: 579 IGNLDQAKRFIEEMPSAPTARIWGALLTASRKNNDIVSAEFAARHVLSSAQDNTGCYVLL 638
G LD+A FI+ M P A IWGA L++ + + D+ AE A + + N+ Y+++
Sbjct: 546 SGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMM 605
Query: 639 SNMYAEAGRWEDVEQIKAIMEKEGLKKTTGCSMFEKNGETHRFINQDRSHSKTYLIYNVL 698
N+Y+ RWEDVE+I+ +M ++ S + + H F + ++H IY L
Sbjct: 606 INLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFEL 665
Query: 699 DILLRKIGEDFYIHNVSKFSPAHLMKNRAKSPHHHSVRLAISFGLISTSVGNPVLVRNNT 758
L+ ++ + Y+ + S + K H+ +LA+++GLI P+ V NT
Sbjct: 666 YKLVSEMKKSGYVPDTSCIHQDISDSEKEKLLMGHTEKLAMTYGLIKKKGLAPIRVVKNT 725
Query: 759 RICEDCHSAVKKISEITKRELIVRDPKCFHHFRNGCCSCGDYW 801
IC D H+ K +S + RE+++++ HHFR+G CSC D W
Sbjct: 726 NICSDSHTVAKYMSVLRNREIVLQEGARVHHFRDGKCSCNDSW 768
Score = 169 bits (427), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 124/475 (26%), Positives = 224/475 (47%), Gaps = 62/475 (13%)
Query: 148 LYLSEGEKVHGSLFKSGL-NSDVYVCNSLIVMYMKLGCVECAERMFDEMPVRDTVSWNSM 206
+Y G +HG L K GL NSD V ++ + Y + + A ++FDEMP RD ++WN +
Sbjct: 1 MYRFLGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEI 60
Query: 207 IGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKIGKEIHCQVIKSGL 266
+ G+ ++ F+EMQ G + +++ L S + G++IH V++ GL
Sbjct: 61 VMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGL 120
Query: 267 EMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVVNAHFLESFSCLRK 326
E +V + SL+ MY + G ++ + ++FN + RN+ +WN+++ Y + ++ L +
Sbjct: 121 ESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDE 180
Query: 327 MLEDDNLNPDCIT-------------------------IINLLPSCTKLGALLE------ 355
M E L PD +T I L PS + + +LL+
Sbjct: 181 M-EICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPG 239
Query: 356 ----GKSIHGYAIRKGFLPNVALETALIDMYAGSGALKMTEKLFGSMIEKNLVSWNAMIA 411
GK+IHGY +R +V +ET LIDMY +G L +F M KN+V+WN++++
Sbjct: 240 HLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVS 299
Query: 412 AYVRNGQNREAMELFQDLWSEPLKPDAMTFASILPAYAEIATLSDSMQIHSLITKLGLVS 471
++A L + E +KPDA+T+ S+ YA + ++ + + + G+
Sbjct: 300 GLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAP 359
Query: 472 NIYISNSIVYMYAKCGDLQTARDVVSWNVIIMAYAIHGLGKISIQLFSEMREKGIKPNES 531
N VVSW I + +G + ++++F +M+E+G+ PN +
Sbjct: 360 N----------------------VVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAA 397
Query: 532 TFVSLLSSCSISGMVDEGWNYFD-SMRKDYGIVPGIEHYGCIIDLLGRIGNLDQA 585
T +LL ++ G +RK+ ++ ++D+ G+ G+L A
Sbjct: 398 TMSTLLKILGCLSLLHSGKEVHGFCLRKN--LICDAYVATALVDMYGKSGDLQSA 450
>sp|Q9FLZ9|PP405_ARATH Pentatricopeptide repeat-containing protein At5g39350
OS=Arabidopsis thaliana GN=PCMP-E16 PE=2 SV=1
Length = 677
Score = 412 bits (1060), Expect = e-114, Method: Compositional matrix adjust.
Identities = 230/646 (35%), Positives = 363/646 (56%), Gaps = 24/646 (3%)
Query: 51 HIHKNQTITSKKSIGPRNITKTRALQELVSS--------GSMESACYLFEKMSYLDTYIW 102
H Q+I+ K++ IT R ++S+ G + A LFE+M +
Sbjct: 24 HFAATQSISKTKALHCHVITGGRVSGHILSTLSVTYALCGHITYARKLFEEMPQSSLLSY 83
Query: 103 NVVIRGFVDNGLFQEAVEFHHRMVCEGFKA--DYFTYPFVIKACAGLLYLSEGEKVHGSL 160
N+VIR +V GL+ +A+ RMV EG K D +TYPFV KA L + G VHG +
Sbjct: 84 NIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRI 143
Query: 161 FKSGLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPVRDTVSWNSMIGGYCSVGDGVSSL 220
+S D YV N+L+ MYM G VE A +FD M RD +SWN+MI GY G +L
Sbjct: 144 LRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDAL 203
Query: 221 VFFKEMQNCGLRYDRFSLISALGAISIEGCLKIGKEIHCQVIKSGLEMDVMVQTSLVDMY 280
+ F M N + D +++S L L++G+ +H V + L + V+ +LV+MY
Sbjct: 204 MMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMY 263
Query: 281 GKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVVNAHFLESFSCLRKMLEDDNLNPDCITI 340
KCG +D A +F+ + R+++ W M+ GY + +E+ L ++++ + + P+ +TI
Sbjct: 264 LKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGD-VENALELCRLMQFEGVRPNAVTI 322
Query: 341 INLLPSCTKLGALLEGKSIHGYAIRKGFLPNVALETALIDMYAGSGALKMTEKLFGSMIE 400
+L+ C + +GK +HG+A+R+ ++ +ET+LI MYA + + ++F +
Sbjct: 323 ASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASK 382
Query: 401 KNLVSWNAMIAAYVRNGQNREAMELFQDLWSEPLKPDAMTFASILPAYAEIATLSDSMQI 460
+ W+A+IA V+N +A+ LF+ + E ++P+ T S+LPAYA +A L +M I
Sbjct: 383 YHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNI 442
Query: 461 HSLITKLGLVSNIYISNSIVYMYAKCGDLQTA-------------RDVVSWNVIIMAYAI 507
H +TK G +S++ + +V++Y+KCG L++A +DVV W +I Y +
Sbjct: 443 HCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGM 502
Query: 508 HGLGKISIQLFSEMREKGIKPNESTFVSLLSSCSISGMVDEGWNYFDSMRKDYGIVPGIE 567
HG G ++Q+F EM G+ PNE TF S L++CS SG+V+EG F M + Y +
Sbjct: 503 HGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSN 562
Query: 568 HYGCIIDLLGRIGNLDQAKRFIEEMPSAPTARIWGALLTASRKNNDIVSAEFAARHVLSS 627
HY CI+DLLGR G LD+A I +P PT+ +WGALL A + ++ E AA +
Sbjct: 563 HYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFEL 622
Query: 628 AQDNTGCYVLLSNMYAEAGRWEDVEQIKAIMEKEGLKKTTGCSMFE 673
+NTG YVLL+N+YA GRW+D+E+++++ME GL+K G S E
Sbjct: 623 EPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIE 668
>sp|Q9CAY1|PP223_ARATH Putative pentatricopeptide repeat-containing protein At3g11460
OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1
Length = 623
Score = 409 bits (1052), Expect = e-113, Method: Compositional matrix adjust.
Identities = 209/594 (35%), Positives = 341/594 (57%), Gaps = 18/594 (3%)
Query: 219 SLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKIGKEIHCQVIKSGLEMDVMVQTSLVD 278
S+ ++ M G D FS L + + G+++HC V K G E + V T+L+
Sbjct: 37 SISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALIS 96
Query: 279 MYGKCGVVDYAERLF--NMIFPRNIVAWNAMVGGYVVNAHFLESFSCLRKMLEDDNLNPD 336
MY KCG+V A ++F N + V +NA++ GY N+ ++ R+M ++ ++ D
Sbjct: 97 MYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRM-KETGVSVD 155
Query: 337 CITIINLLPSCTKLGALLEGKSIHGYAIRKGFLPNVALETALIDMYAGSGALKMTEKLFG 396
+T++ L+P CT L G+S+HG ++ G VA+ + I MY G+++ +LF
Sbjct: 156 SVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFD 215
Query: 397 SMIEKNLVSWNAMIAAYVRNGQNREAMELFQDLWSEPLKPDAMTFASILPAYAEIATLSD 456
M K L++WNA+I+ Y +NG + +EL++ + S + PD T S+L + A +
Sbjct: 216 EMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKI 275
Query: 457 SMQIHSLITKLGLVSNIYISNSIVYMYAKCGDLQTARDV---------VSWNVIIMAYAI 507
++ L+ G V N+++SN+ + MYA+CG+L AR V VSW +I Y +
Sbjct: 276 GHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGM 335
Query: 508 HGLGKISIQLFSEMREKGIKPNESTFVSLLSSCSISGMVDEGWNYFDSMRKDYGIVPGIE 567
HG+G+I + LF +M ++GI+P+ + FV +LS+CS SG+ D+G F +M+++Y + PG E
Sbjct: 336 HGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPE 395
Query: 568 HYGCIIDLLGRIGNLDQAKRFIEEMPSAPTARIWGALLTASRKNNDIVSAEFAARHVLSS 627
HY C++DLLGR G LD+A FIE MP P +WGALL A + + ++ AE A V+
Sbjct: 396 HYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEF 455
Query: 628 AQDNTGCYVLLSNMYAEAGRWEDVEQIKAIMEKEGLKKTTGCSMFEKNGETHRFINQDRS 687
+N G YVL+SN+Y+++ E + +I+ +M + +K G S E G H F+ DRS
Sbjct: 456 EPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLFLAGDRS 515
Query: 688 HSKTYLIYNVLDILLRKIGEDFYIHNVSKFSPAHLMKNRAKSPHHHSVRLAISFGLISTS 747
H +T ++ +LD L + E ++ + + + HS RLAI+FG++++
Sbjct: 516 HEQTEEVHRMLDELETSVME------LAGNMDCDRGEEVSSTTREHSERLAIAFGILNSI 569
Query: 748 VGNPVLVRNNTRICEDCHSAVKKISEITKRELIVRDPKCFHHFRNGCCSCGDYW 801
G +LV N R+CEDCH +K++S+I R+ +VRD FH+F++G CSC DYW
Sbjct: 570 PGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRFHYFKDGVCSCKDYW 623
Score = 152 bits (384), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/317 (30%), Positives = 158/317 (49%), Gaps = 11/317 (3%)
Query: 102 WNVVIRGFVDNGLFQEAVEFHHRMVCEGFKADYFTYPFVIKACAGLLYLSEGEKVHGSLF 161
+N +I G+ N +A RM G D T ++ C YL G +HG
Sbjct: 124 YNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCV 183
Query: 162 KSGLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPVRDTVSWNSMIGGYCSVGDGVSSLV 221
K GL+S+V V NS I MYMK G VE R+FDEMPV+ ++WN++I GY G L
Sbjct: 184 KGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLE 243
Query: 222 FFKEMQNCGLRYDRFSLISALGAISIEGCLKIGKEIHCQVIKSGLEMDVMVQTSLVDMYG 281
+++M++ G+ D F+L+S L + + G KIG E+ V +G +V V + + MY
Sbjct: 244 LYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYA 303
Query: 282 KCGVVDYAERLFNMIFPRNIVAWNAMVGGYVVNAHFLESFSCLRKMLEDD----NLNPDC 337
+CG + A +F+++ +++V+W AM+G Y ++ + ML DD + PD
Sbjct: 304 RCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHG-----MGEIGLMLFDDMIKRGIRPDG 358
Query: 338 ITIINLLPSCTKLGALLEGKSIHGYAIRKGFL-PNVALETALIDMYAGSGALKMTEKLFG 396
+ +L +C+ G +G + R+ L P + L+D+ +G L +
Sbjct: 359 AVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIE 418
Query: 397 SM-IEKNLVSWNAMIAA 412
SM +E + W A++ A
Sbjct: 419 SMPVEPDGAVWGALLGA 435
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 113/231 (48%), Gaps = 2/231 (0%)
Query: 82 GSMESACYLFEKMSYLDTYIWNVVIRGFVDNGLFQEAVEFHHRMVCEGFKADYFTYPFVI 141
GS+E+ LF++M WN VI G+ NGL + +E + +M G D FT V+
Sbjct: 205 GSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVL 264
Query: 142 KACAGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPVRDTV 201
+CA L G +V + +G +V+V N+ I MY + G + A +FD MPV+ V
Sbjct: 265 SSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLV 324
Query: 202 SWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKIGKEIHCQV 261
SW +MIG Y G G L+ F +M G+R D + L A S G G E+ +
Sbjct: 325 SWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAM 384
Query: 262 IKS-GLEMDVMVQTSLVDMYGKCGVVDYA-ERLFNMIFPRNIVAWNAMVGG 310
+ LE + LVD+ G+ G +D A E + +M + W A++G
Sbjct: 385 KREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGA 435
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 407 bits (1047), Expect = e-112, Method: Compositional matrix adjust.
Identities = 239/753 (31%), Positives = 386/753 (51%), Gaps = 109/753 (14%)
Query: 156 VHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPVRDTVSWNSMIGGYCSVGD 215
VH + KSGL VY+ N+L+ +Y K G A ++FDEMP+R SWN+++ Y GD
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGD 95
Query: 216 GVSSLVFFKE-------------------------------MQNCGLRYDRFSLISALGA 244
S+ FF + M G+ +F+L + L +
Sbjct: 96 MDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLAS 155
Query: 245 ISIEGCLKIGKEIHCQVIKSGLEMDVMVQTSLVDMYGKCG-------------------- 284
++ C++ GK++H ++K GL +V V SL++MY KCG
Sbjct: 156 VAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSW 215
Query: 285 -----------VVDYAERLFNMIFPRNIVAWNAMVGGYVVNAHFLESFSCLRKMLEDDNL 333
+D A F + R+IV WN+M+ G+ + L + KML D L
Sbjct: 216 NAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLL 275
Query: 334 NPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGF-LPNVALE----------------- 375
+PD T+ ++L +C L L GK IH + + GF + + L
Sbjct: 276 SPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARR 335
Query: 376 ---------------TALIDMYAGSGALKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNR 420
TAL+D Y G + + +F S+ ++++V+W AMI Y ++G
Sbjct: 336 LIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYG 395
Query: 421 EAMELFQDLWSEPLKPDAMTFASILPAYAEIATLSDSMQIHSLITKLGLVSNIYISNSIV 480
EA+ LF+ + +P++ T A++L + +A+LS QIH K G + ++ +SN+++
Sbjct: 396 EAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALI 455
Query: 481 YMYAKCGDLQTA----------RDVVSWNVIIMAYAIHGLGKISIQLFSEMREKGIKPNE 530
MYAK G++ +A RD VSW +I+A A HG + +++LF M +G++P+
Sbjct: 456 TMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDH 515
Query: 531 STFVSLLSSCSISGMVDEGWNYFDSMRKDYGIVPGIEHYGCIIDLLGRIGNLDQAKRFIE 590
T+V + S+C+ +G+V++G YFD M+ I+P + HY C++DL GR G L +A+ FIE
Sbjct: 516 ITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIE 575
Query: 591 EMPSAPTARIWGALLTASRKNNDIVSAEFAARHVLSSAQDNTGCYVLLSNMYAEAGRWED 650
+MP P WG+LL+A R + +I + AA +L +N+G Y L+N+Y+ G+WE+
Sbjct: 576 KMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEE 635
Query: 651 VEQIKAIMEKEGLKKTTGCSMFEKNGETHRFINQDRSHSKTYLIYNVLDILLRKIGEDFY 710
+I+ M+ +KK G S E + H F +D +H + IY + + +I + Y
Sbjct: 636 AAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGY 695
Query: 711 IHNVSKFSPAHLMKNRAKSP--HHHSVRLAISFGLISTSVGNPVLVRNNTRICEDCHSAV 768
+ + + S H ++ K HHS +LAI+FGLIST + + N R+C DCH+A+
Sbjct: 696 VPDTA--SVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAI 753
Query: 769 KKISEITKRELIVRDPKCFHHFRNGCCSCGDYW 801
K IS++ RE+IVRD FHHF++G CSC DYW
Sbjct: 754 KFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 202 bits (513), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 152/541 (28%), Positives = 251/541 (46%), Gaps = 86/541 (15%)
Query: 82 GSMESACYLFEKMSYLDTYIWNVVIRGFVDNGLFQEAVEFHHRMVCEGFKADYFTYPFVI 141
G M+S C F+++ D+ W +I G+ + G + +A+ MV EG + FT V+
Sbjct: 94 GDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVL 153
Query: 142 KACAGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPVRDTV 201
+ A + G+KVH + K GL +V V NSL+ MY K G A+ +FD M VRD
Sbjct: 154 ASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDIS 213
Query: 202 S-------------------------------WNSMIGGYCSVGDGVSSL-VFFKEMQNC 229
S WNSMI G+ G + +L +F K +++
Sbjct: 214 SWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDS 273
Query: 230 GLRYDRFSLISALGAISIEGCLKIGKEIHCQVIKSGLEMDVMVQTSLVDMYGKCGVVDYA 289
L DRF+L S L A + L IGK+IH ++ +G ++ +V +L+ MY +CG V+ A
Sbjct: 274 LLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETA 333
Query: 290 ERL---------------------------------FNMIFPRNIVAWNAMVGGYVVNAH 316
RL F + R++VAW AM+ GY +
Sbjct: 334 RRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGS 393
Query: 317 FLESFSCLRKMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGFLPNVALET 376
+ E+ + R M+ P+ T+ +L + L +L GK IHG A++ G + +V++
Sbjct: 394 YGEAINLFRSMVGGGQ-RPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSN 452
Query: 377 ALIDMYAGSGALKMTEKLFGSM-IEKNLVSWNAMIAAYVRNGQNREAMELFQDLWSEPLK 435
ALI MYA +G + + F + E++ VSW +MI A ++G EA+ELF+ + E L+
Sbjct: 453 ALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLR 512
Query: 436 PDAMTFASILPAYAEIATLSDSMQIHSLITKLG-LVSNIYISNSIVYMYAKCGDLQTAR- 493
PD +T+ + A ++ Q ++ + ++ + +V ++ + G LQ A+
Sbjct: 513 PDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQE 572
Query: 494 ---------DVVSWNVIIMAYAIH---GLGKISIQ--LFSEMREKGIKPNESTFVSLLSS 539
DVV+W ++ A +H LGK++ + L E G S +L S+
Sbjct: 573 FIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAY---SALANLYSA 629
Query: 540 C 540
C
Sbjct: 630 C 630
Score = 143 bits (360), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 180/386 (46%), Gaps = 43/386 (11%)
Query: 67 RNITKTRALQEL-VSSGSMESACYLFEKMSYLDTYIWNVVIRGFVDNGLFQEAVEFHHRM 125
R+I+ A+ L + G M+ A FE+M+ D WN +I GF G A++ +M
Sbjct: 210 RDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKM 269
Query: 126 VCEGF-KADYFTYPFVIKACAGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGC 184
+ + D FT V+ ACA L L G+++H + +G + V N+LI MY + G
Sbjct: 270 LRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGG 329
Query: 185 VECAERMFDE---------------------------------MPVRDTVSWNSMIGGYC 211
VE A R+ ++ + RD V+W +MI GY
Sbjct: 330 VETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYE 389
Query: 212 SVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKIGKEIHCQVIKSGLEMDVM 271
G ++ F+ M G R + ++L + L S L GK+IH +KSG V
Sbjct: 390 QHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVS 449
Query: 272 VQTSLVDMYGKCGVVDYAERLFNMIF-PRNIVAWNAMVGGYVVNAHFLESFSCLRKMLED 330
V +L+ MY K G + A R F++I R+ V+W +M+ + H E+ ML
Sbjct: 450 VSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLM- 508
Query: 331 DNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKG---FLPNVALETALIDMYAGSGA 387
+ L PD IT + + +CT G + +G+ + + K +P ++ ++D++ +G
Sbjct: 509 EGLRPDHITYVGVFSACTHAGLVNQGRQY--FDMMKDVDKIIPTLSHYACMVDLFGRAGL 566
Query: 388 LKMTEKLFGSM-IEKNLVSWNAMIAA 412
L+ ++ M IE ++V+W ++++A
Sbjct: 567 LQEAQEFIEKMPIEPDVVTWGSLLSA 592
Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 134/286 (46%), Gaps = 12/286 (4%)
Query: 72 TRALQELVSSGSMESACYLFEKMSYLDTYIWNVVIRGFVDNGLFQEAVEFHHRMVCEGFK 131
T L + G M A +F + D W +I G+ +G + EA+ MV G +
Sbjct: 351 TALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQR 410
Query: 132 ADYFTYPFVIKACAGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERM 191
+ +T ++ + L LS G+++HGS KSG V V N+LI MY K G + A R
Sbjct: 411 PNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRA 470
Query: 192 FDEMPV-RDTVSWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGC 250
FD + RDTVSW SMI G +L F+ M GLR D + + A + G
Sbjct: 471 FDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGL 530
Query: 251 LKIGKEIHCQVIKSGLEMDVMVQT-----SLVDMYGKCGVVDYAERLF-NMIFPRNIVAW 304
+ G++ + ++K ++D ++ T +VD++G+ G++ A+ M ++V W
Sbjct: 531 VNQGRQ-YFDMMK---DVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTW 586
Query: 305 NAMVGGYVVNAHF-LESFSCLRKMLEDDNLNPDCITIINLLPSCTK 349
+++ V+ + L + R +L + + + NL +C K
Sbjct: 587 GSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGK 632
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 407 bits (1045), Expect = e-112, Method: Compositional matrix adjust.
Identities = 234/733 (31%), Positives = 367/733 (50%), Gaps = 94/733 (12%)
Query: 155 KVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPVRDTVSWNSMIGGYCSVG 214
+ H + KSG +D Y+ LI Y C A+ + +P S++S+I
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 215 DGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKIGKEIHCQVIKSGLEMDVMVQT 274
S+ F M + GL D L + + K+GK+IHC SGL+MD VQ
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 275 SLVDMYGKCGVVDYAERLFNMIFPR----------------------------------- 299
S+ MY +CG + A ++F+ + +
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 300 NIVAWNAMVGGYVVNAHFLESFSCLRKMLEDDNLNPDCITIINLLPSCTKLGALLEGKSI 359
NIV+WN ++ G+ + + E+ +K + PD +T+ ++LPS L G+ I
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQK-IHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLI 274
Query: 360 HGYAIRKGFLPNVALETALIDMYAGSG--------------------------------- 386
HGY I++G L + + +A+IDMY SG
Sbjct: 275 HGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLV 334
Query: 387 --ALKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMELFQDLWSEPLKPDAMTFASI 444
AL+M E +E N+VSW ++IA +NG++ EA+ELF+++ +KP+ +T S+
Sbjct: 335 DKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSM 394
Query: 445 LPAYAEIATLSDSMQIHSLITKLGLVSNIYISNSIVYMYAKCG---------DLQTARDV 495
LPA IA L H ++ L+ N+++ ++++ MYAKCG ++ +++
Sbjct: 395 LPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNL 454
Query: 496 VSWNVIIMAYAIHGLGKISIQLFSEMREKGIKPNESTFVSLLSSCSISGMVDEGWNYFDS 555
V WN ++ +++HG K + +F + +KP+ +F SLLS+C G+ DEGW YF
Sbjct: 455 VCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKM 514
Query: 556 MRKDYGIVPGIEHYGCIIDLLGRIGNLDQAKRFIEEMPSAPTARIWGALLTASRKNNDIV 615
M ++YGI P +EHY C+++LLGR G L +A I+EMP P + +WGALL + R N++
Sbjct: 515 MSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVD 574
Query: 616 SAEFAARHVLSSAQDNTGCYVLLSNMYAEAGRWEDVEQIKAIMEKEGLKKTTGCSMFEKN 675
AE AA + +N G YVLLSN+YA G W +V+ I+ ME GLKK GCS +
Sbjct: 575 LAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVK 634
Query: 676 GETHRFINQDRSHSKTYLIYNVLDIL---LRKIGE----DFYIHNVSKFSPAHLMKNRAK 728
+ + D+SH + I +D + +RK G DF +H+V + ++
Sbjct: 635 NRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWG--- 691
Query: 729 SPHHHSVRLAISFGLISTSVGNPVLVRNNTRICEDCHSAVKKISEITKRELIVRDPKCFH 788
HS +LA+ FGL++T G P+ V N RIC DCH+ +K IS RE+ +RD FH
Sbjct: 692 ----HSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFH 747
Query: 789 HFRNGCCSCGDYW 801
HF++G CSCGD+W
Sbjct: 748 HFKDGICSCGDFW 760
Score = 193 bits (491), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 132/519 (25%), Positives = 235/519 (45%), Gaps = 97/519 (18%)
Query: 100 YIWNVVIRGFVDNGLFQEAVEFHHRMVCEGFKADYFTYPFVIKACAGLLYLSEGEKVHGS 159
Y ++ +I LF +++ RM G D P + K CA L G+++H
Sbjct: 82 YSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCV 141
Query: 160 LFKSGLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPVRDT------------------- 200
SGL+ D +V S+ MYM+ G + A ++FD M +D
Sbjct: 142 SCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEV 201
Query: 201 ----------------VSWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGA 244
VSWN ++ G+ G ++V F+++ + G D+ ++ S L +
Sbjct: 202 VRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPS 261
Query: 245 ISIEGCLKIGKEIHCQVIKSGLEMDVMVQTSLVDMYGKC--------------------- 283
+ L +G+ IH VIK GL D V ++++DMYGK
Sbjct: 262 VGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVC 321
Query: 284 ----------GVVDYAERLFNMIFPR----NIVAWNAMVGGYVVNAHFLESFSCLRKMLE 329
G+VD A +F + + N+V+W +++ G N +E+ R+M +
Sbjct: 322 NAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREM-Q 380
Query: 330 DDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGFLPNVALETALIDMYAGSGALK 389
+ P+ +TI ++LP+C + AL G+S HG+A+R L NV + +ALIDMYA G +
Sbjct: 381 VAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRIN 440
Query: 390 MTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMELFQDLWSEPLKPDAMTFASILPAYA 449
+++ +F M KNLV WN+++ + +G+ +E M +F+ L LKPD ++F S+L A
Sbjct: 441 LSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACG 500
Query: 450 EIATLSDSMQIHSLIT-KLGLVSNIYISNSIVYMYAKCGDLQTARDVVSWNVIIMAYAIH 508
++ + + +++ + G+ + + +V + + G LQ A D++
Sbjct: 501 QVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLI------------ 548
Query: 509 GLGKISIQLFSEMREKGIKPNESTFVSLLSSCSISGMVD 547
+E +P+ + +LL+SC + VD
Sbjct: 549 -------------KEMPFEPDSCVWGALLNSCRLQNNVD 574
Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 117/471 (24%), Positives = 203/471 (43%), Gaps = 61/471 (12%)
Query: 102 WNVVIRGFVDNGLFQEAVEFHHRMVCEGFKADYFTYPFVIKACAGLLYLSEGEKVHGSLF 161
WN ++ GF +G +EAV ++ GF D T V+ + L+ G +HG +
Sbjct: 220 WNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVI 279
Query: 162 KSGLNSD----------------VY---------------VCNSLIVMYMKLGCVECAER 190
K GL D VY VCN+ I + G V+ A
Sbjct: 280 KQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALE 339
Query: 191 MFDEMPVR----DTVSWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAIS 246
MF+ + + VSW S+I G G + +L F+EMQ G++ + ++ S L A
Sbjct: 340 MFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACG 399
Query: 247 IEGCLKIGKEIHCQVIKSGLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNA 306
L G+ H ++ L +V V ++L+DMY KCG ++ ++ +FNM+ +N+V WN+
Sbjct: 400 NIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNS 459
Query: 307 MVGGYVVNAHFLESFSCLRKMLEDDNLNPDCITIINLLPSCTKLGALLEG-KSIHGYAIR 365
++ G+ ++ E S ++ L PD I+ +LL +C ++G EG K +
Sbjct: 460 LMNGFSMHGKAKEVMSIFESLMR-TRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEE 518
Query: 366 KGFLPNVALETALIDMYAGSGALKMTEKLFGSM-IEKNLVSWNAMI-AAYVRNGQNREAM 423
G P + + ++++ +G L+ L M E + W A++ + ++N + +
Sbjct: 519 YGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEI 578
Query: 424 ELFQDLWSEPLKPDAMTFASILPAYAEIATLSDSMQIHSLITKLGLVSN-----IYISNS 478
+ EP P S + A + T DS I + + LGL N I + N
Sbjct: 579 AAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDS--IRNKMESLGLKKNPGCSWIQVKNR 636
Query: 479 IVYMYAKCGDLQTARDVVSWNVIIMAYAIHGLGKISIQLFSEMREKGIKPN 529
+ + A GD + I + + ++ EMR+ G +PN
Sbjct: 637 VYTLLA--GDKSHPQ-------------IDQITEKMDEISKEMRKSGHRPN 672
Score = 87.8 bits (216), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 108/237 (45%), Gaps = 6/237 (2%)
Query: 78 LVSSGSMESACYLFE----KMSYLDTYIWNVVIRGFVDNGLFQEAVEFHHRMVCEGFKAD 133
L +G ++ A +FE + L+ W +I G NG EA+E M G K +
Sbjct: 328 LSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPN 387
Query: 134 YFTYPFVIKACAGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERMFD 193
+ T P ++ AC + L G HG + L +V+V ++LI MY K G + ++ +F+
Sbjct: 388 HVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFN 447
Query: 194 EMPVRDTVSWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKI 253
MP ++ V WNS++ G+ G + F+ + L+ D S S L A G
Sbjct: 448 MMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDE 507
Query: 254 G-KEIHCQVIKSGLEMDVMVQTSLVDMYGKCGVVDYAERLFN-MIFPRNIVAWNAMV 308
G K + G++ + + +V++ G+ G + A L M F + W A++
Sbjct: 508 GWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALL 564
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 402 bits (1032), Expect = e-111, Method: Compositional matrix adjust.
Identities = 221/631 (35%), Positives = 346/631 (54%), Gaps = 52/631 (8%)
Query: 122 HHRMVCEGFKADYFTYPFVIKACAGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMK 181
H ++ GF + F +I A + L +G +V F ++Y NS++ K
Sbjct: 43 HASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQV----FDKMPQRNIYTWNSVVTGLTK 98
Query: 182 LGCVECAERMFDEMPVRDTVSWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISA 241
LG ++ A+ +F MP RD +WNSM+ G+ +L +F M G + +S S
Sbjct: 99 LGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASV 158
Query: 242 LGAISIEGCLKIGKEIHCQVIKSGLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNI 301
L A S + G ++H + KS DV + ++LVDMY KCG V+ A+R+F+ + RN+
Sbjct: 159 LSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNV 218
Query: 302 VAWNAMVGGYVVNAHFLESFSCLRKMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIHG 361
V+WN+++ + N +E+ + MLE + PD +T+ +++ +C L A+ G+ +HG
Sbjct: 219 VSWNSLITCFEQNGPAVEALDVFQMMLES-RVEPDEVTLASVISACASLSAIKVGQEVHG 277
Query: 362 YAIRKGFLPN--------------------------------VALETALIDMYAGSGALK 389
++ L N V ET++I YA + + K
Sbjct: 278 RVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTK 337
Query: 390 MTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMELFQDLWSEPLKPDAMTFASILPAYA 449
+F M E+N+VSWNA+IA Y +NG+N EA+ LF L E + P +FA+IL A A
Sbjct: 338 AARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACA 397
Query: 450 EIATLSDSMQIHSLITKLGLV------SNIYISNSIVYMYAKCGDLQTA---------RD 494
++A L MQ H + K G +I++ NS++ MY KCG ++ RD
Sbjct: 398 DLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERD 457
Query: 495 VVSWNVIIMAYAIHGLGKISIQLFSEMREKGIKPNESTFVSLLSSCSISGMVDEGWNYFD 554
VSWN +I+ +A +G G +++LF EM E G KP+ T + +LS+C +G V+EG +YF
Sbjct: 458 CVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFS 517
Query: 555 SMRKDYGIVPGIEHYGCIIDLLGRIGNLDQAKRFIEEMPSAPTARIWGALLTASRKNNDI 614
SM +D+G+ P +HY C++DLLGR G L++AK IEEMP P + IWG+LL A + + +I
Sbjct: 518 SMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNI 577
Query: 615 VSAEFAARHVLSSAQDNTGCYVLLSNMYAEAGRWEDVEQIKAIMEKEGLKKTTGCSMFEK 674
++ A +L N+G YVLLSNMYAE G+WEDV ++ M KEG+ K GCS +
Sbjct: 578 TLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKI 637
Query: 675 NGETHRFINQDRSHSKTYLIYNVLDILLRKI 705
G H F+ +D+SH + I+++LDIL+ ++
Sbjct: 638 QGHDHVFMVKDKSHPRKKQIHSLLDILIAEM 668
Score = 215 bits (547), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 159/547 (29%), Positives = 265/547 (48%), Gaps = 60/547 (10%)
Query: 67 RNI-TKTRALQELVSSGSMESACYLFEKMSYLDTYIWNVVIRGFVDNGLFQEAVEFHHRM 125
RNI T + L G ++ A LF M D WN ++ GF + +EA+ + M
Sbjct: 84 RNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMM 143
Query: 126 VCEGFKADYFTYPFVIKACAGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCV 185
EGF + +++ V+ AC+GL +++G +VH + KS SDVY+ ++L+ MY K G V
Sbjct: 144 HKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNV 203
Query: 186 ECAERMFDEMPVRDTVSWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAI 245
A+R+FDEM R+ VSWNS+I + G V +L F+ M + D +L S + A
Sbjct: 204 NDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISAC 263
Query: 246 SIEGCLKIGKEIHCQVIKSG-LEMDVMVQTSLVDMYGKCGVVDYAERLFN---------- 294
+ +K+G+E+H +V+K+ L D+++ + VDMY KC + A +F+
Sbjct: 264 ASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAE 323
Query: 295 -----------------MIF----PRNIVAWNAMVGGYVVNAHFLESFSCLRKMLEDDNL 333
++F RN+V+WNA++ GY N E+ S L +L+ +++
Sbjct: 324 TSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALS-LFCLLKRESV 382
Query: 334 NPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGFL------PNVALETALIDMYAGSGA 387
P + N+L +C L L G H + ++ GF ++ + +LIDMY G
Sbjct: 383 CPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGC 442
Query: 388 LKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMELFQDLWSEPLKPDAMTFASILPA 447
++ +F M+E++ VSWNAMI + +NG EA+ELF+++ KPD +T +L A
Sbjct: 443 VEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSA 502
Query: 448 YAEIATLSDSMQIHSLITK-LGLVSNIYISNSIVYMYAKCGDLQTAR----------DVV 496
+ + S +T+ G+ +V + + G L+ A+ D V
Sbjct: 503 CGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSV 562
Query: 497 SWNVIIMAYAIH---GLGKISIQLFSEMREKGIKPNESTFVSLLSSCSIS-GMVDEGWNY 552
W ++ A +H LGK + E ++P+ S LLS+ G ++ N
Sbjct: 563 IWGSLLAACKVHRNITLGKYVAEKLLE-----VEPSNSGPYVLLSNMYAELGKWEDVMNV 617
Query: 553 FDSMRKD 559
SMRK+
Sbjct: 618 RKSMRKE 624
Score = 151 bits (382), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 167/356 (46%), Gaps = 71/356 (19%)
Query: 257 IHCQVIKSGLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVVNAH 316
+H VIKSG ++ +Q L+D Y KCG ++ ++F+ + RNI WN++V G
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101
Query: 317 FLESFSCLRKMLEDDNLNPDCI------------------------------TIINLLPS 346
E+ S R M E D + + + ++L +
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSA 161
Query: 347 CTKLGALLEGKSIHGYAIRKGFLPNVALETALIDMYAGSGALKMTEKLFGSMIEKNLVSW 406
C+ L + +G +H + FL +V + +AL+DMY+ G + +++F M ++N+VSW
Sbjct: 162 CSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSW 221
Query: 407 NAMIAAYVRNGQNREAMELFQDLWSEPLKPDAMTFASILPAYAEIATLSDSMQIHSLITK 466
N++I + +NG EA+++FQ + ++PD +T AS++ A A ++ + ++H + K
Sbjct: 222 NSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVK 281
Query: 467 LG-LVSNIYISNSIVYMYAKCGDLQTA--------------------------------- 492
L ++I +SN+ V MYAKC ++ A
Sbjct: 282 NDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARL 341
Query: 493 -------RDVVSWNVIIMAYAIHGLGKISIQLFSEMREKGIKPNESTFVSLLSSCS 541
R+VVSWN +I Y +G + ++ LF ++ + + P +F ++L +C+
Sbjct: 342 MFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACA 397
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 399 bits (1026), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/577 (35%), Positives = 330/577 (57%), Gaps = 11/577 (1%)
Query: 234 DRFSLISALGAISIEGCLKIGKEIHCQVIKSGLEMDVMVQTSLVDMYGKCGVVDYAERLF 293
DR + L ++ L G+ +H +++S D+++ +L++MY KCG ++ A ++F
Sbjct: 59 DRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVF 118
Query: 294 NMIFPRNIVAWNAMVGGYVVNAHFLESFSCLRKMLEDDNLNPDCITIINLLPSCTKLGAL 353
+ R+ V W ++ GY + ++ +ML +P+ T+ +++ +
Sbjct: 119 EKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRF-GYSPNEFTLSSVIKAAAAERRG 177
Query: 354 LEGKSIHGYAIRKGFLPNVALETALIDMYAGSGALKMTEKLFGSMIEKNLVSWNAMIAAY 413
G +HG+ ++ GF NV + +AL+D+Y G + + +F ++ +N VSWNA+IA +
Sbjct: 178 CCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGH 237
Query: 414 VRNGQNREAMELFQDLWSEPLKPDAMTFASILPAYAEIATLSDSMQIHSLITKLGLVSNI 473
R +A+ELFQ + + +P ++AS+ A + L +H+ + K G
Sbjct: 238 ARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVA 297
Query: 474 YISNSIVYMYAKCGDLQTAR---------DVVSWNVIIMAYAIHGLGKISIQLFSEMREK 524
+ N+++ MYAK G + AR DVVSWN ++ AYA HG GK ++ F EMR
Sbjct: 298 FAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRV 357
Query: 525 GIKPNESTFVSLLSSCSISGMVDEGWNYFDSMRKDYGIVPGIEHYGCIIDLLGRIGNLDQ 584
GI+PNE +F+S+L++CS SG++DEGW+Y++ M+KD GIVP HY ++DLLGR G+L++
Sbjct: 358 GIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNR 416
Query: 585 AKRFIEEMPSAPTARIWGALLTASRKNNDIVSAEFAARHVLSSAQDNTGCYVLLSNMYAE 644
A RFIEEMP PTA IW ALL A R + + +AA HV D+ G +V+L N+YA
Sbjct: 417 ALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYAS 476
Query: 645 AGRWEDVEQIKAIMEKEGLKKTTGCSMFEKNGETHRFINQDRSHSKTYLIYNVLDILLRK 704
GRW D +++ M++ G+KK CS E H F+ D H + I + +L K
Sbjct: 477 GGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAK 536
Query: 705 IGEDFYIHNVSKFSPAHLMKNRAKSPHHHSVRLAISFGLISTSVGNPVLVRNNTRICEDC 764
I E Y+ + S + R + +HS ++A++F L++T G+ + ++ N R+C DC
Sbjct: 537 IKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDC 596
Query: 765 HSAVKKISEITKRELIVRDPKCFHHFRNGCCSCGDYW 801
H+A+K S++ RE+IVRD FHHF++G CSC DYW
Sbjct: 597 HTAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633
Score = 204 bits (519), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 109/363 (30%), Positives = 199/363 (54%), Gaps = 5/363 (1%)
Query: 132 ADYFTYPFVIKACAGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERM 191
AD Y ++K C L +G VH + +S D+ + N+L+ MY K G +E A ++
Sbjct: 58 ADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKV 117
Query: 192 FDEMPVRDTVSWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIE--G 249
F++MP RD V+W ++I GY +L+FF +M G + F+L S + A + E G
Sbjct: 118 FEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRG 177
Query: 250 CLKIGKEIHCQVIKSGLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVG 309
C G ++H +K G + +V V ++L+D+Y + G++D A+ +F+ + RN V+WNA++
Sbjct: 178 C--CGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIA 235
Query: 310 GYVVNAHFLESFSCLRKMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGFL 369
G+ + ++ + ML D P + +L +C+ G L +GK +H Y I+ G
Sbjct: 236 GHARRSGTEKALELFQGMLR-DGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEK 294
Query: 370 PNVALETALIDMYAGSGALKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMELFQDL 429
L+DMYA SG++ K+F + ++++VSWN+++ AY ++G +EA+ F+++
Sbjct: 295 LVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEM 354
Query: 430 WSEPLKPDAMTFASILPAYAEIATLSDSMQIHSLITKLGLVSNIYISNSIVYMYAKCGDL 489
++P+ ++F S+L A + L + + L+ K G+V + ++V + + GDL
Sbjct: 355 RRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDL 414
Query: 490 QTA 492
A
Sbjct: 415 NRA 417
Score = 166 bits (421), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 99/335 (29%), Positives = 173/335 (51%), Gaps = 8/335 (2%)
Query: 82 GSMESACYLFEKMSYLDTYIWNVVIRGFVDNGLFQEAVEFHHRMVCEGFKADYFTYPFVI 141
GS+E A +FEKM D W +I G+ + +A+ F ++M+ G+ + FT VI
Sbjct: 109 GSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVI 168
Query: 142 KACAGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPVRDTV 201
KA A G ++HG K G +S+V+V ++L+ +Y + G ++ A+ +FD + R+ V
Sbjct: 169 KAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDV 228
Query: 202 SWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKIGKEIHCQV 261
SWN++I G+ +L F+ M G R FS S GA S G L+ GK +H +
Sbjct: 229 SWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYM 288
Query: 262 IKSGLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVVNAHFLES- 320
IKSG ++ +L+DMY K G + A ++F+ + R++V+WN+++ Y + E+
Sbjct: 289 IKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAV 348
Query: 321 --FSCLRKMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGFLPNVALETAL 378
F +R++ + P+ I+ +++L +C+ G L EG + + G +P +
Sbjct: 349 WWFEEMRRV----GIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTV 404
Query: 379 IDMYAGSGALKMTEKLFGSM-IEKNLVSWNAMIAA 412
+D+ +G L + M IE W A++ A
Sbjct: 405 VDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNA 439
Score = 122 bits (307), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 123/243 (50%), Gaps = 2/243 (0%)
Query: 68 NITKTRALQELVSS-GSMESACYLFEKMSYLDTYIWNVVIRGFVDNGLFQEAVEFHHRMV 126
N+ AL +L + G M+ A +F+ + + WN +I G ++A+E M+
Sbjct: 195 NVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGML 254
Query: 127 CEGFKADYFTYPFVIKACAGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVE 186
+GF+ +F+Y + AC+ +L +G+ VH + KSG + N+L+ MY K G +
Sbjct: 255 RDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIH 314
Query: 187 CAERMFDEMPVRDTVSWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAIS 246
A ++FD + RD VSWNS++ Y G G ++ +F+EM+ G+R + S +S L A S
Sbjct: 315 DARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACS 374
Query: 247 IEGCLKIGKEIHCQVIKSGLEMDVMVQTSLVDMYGKCGVVDYAERLF-NMIFPRNIVAWN 305
G L G + + K G+ + ++VD+ G+ G ++ A R M W
Sbjct: 375 HSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWK 434
Query: 306 AMV 308
A++
Sbjct: 435 ALL 437
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 105/267 (39%), Gaps = 17/267 (6%)
Query: 428 DLWSEPLKPDAMTFASILPAYAEIATLSDSMQIHSLITKLGLVSNIYISNSIVYMYAKCG 487
DL + D + ++L L +H+ I + +I + N+++ MYAKCG
Sbjct: 50 DLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCG 109
Query: 488 DLQTA---------RDVVSWNVIIMAYAIHGLGKISIQLFSEMREKGIKPNESTFVSLLS 538
L+ A RD V+W +I Y+ H ++ F++M G PNE T S++
Sbjct: 110 SLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIK 169
Query: 539 SCSISGMVDEGWNYFDSMRKDYGIVPGIEHYGCIIDLLGRIGNLDQAKRFIEEMPSAPTA 598
+ + G + G + ++DL R G +D A+ + + S
Sbjct: 170 AAAAERRGCCG-HQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDV 228
Query: 599 RIWGALLTA-SRKNNDIVSAEFAARHVLSSAQDNTGCYVLL-----SNMYAEAGRWEDVE 652
W AL+ +R++ + E + + + Y L S + E G+W
Sbjct: 229 S-WNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAY 287
Query: 653 QIKAIMEKEGLKKTTGCSMFEKNGETH 679
IK+ + T M+ K+G H
Sbjct: 288 MIKSGEKLVAFAGNTLLDMYAKSGSIH 314
>sp|Q9LUS3|PP237_ARATH Pentatricopeptide repeat-containing protein At3g16610
OS=Arabidopsis thaliana GN=PCMP-E91 PE=2 SV=1
Length = 654
Score = 398 bits (1023), Expect = e-110, Method: Compositional matrix adjust.
Identities = 221/642 (34%), Positives = 368/642 (57%), Gaps = 35/642 (5%)
Query: 52 IHKN---QTITSKKSIGPRNITKTRALQELVSSGSMESACYLFEKMSY--LDTYIWNVVI 106
IH++ +++T S N+T+ A S +E A ++F+++ + ++ W+++I
Sbjct: 21 IHQHLLKRSLTLSSSTVLVNLTRLYA-----SCNEVELARHVFDEIPHPRINPIAWDLMI 75
Query: 107 RGFVDNGLFQEAVEFHHRMVCEGFKADYFTYPFVIKACAGLLYLSEGEKVHGSLFKSGLN 166
R + N ++A++ +++M+ G + +TYPFV+KACAGL + +G+ +H + S
Sbjct: 76 RAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFA 135
Query: 167 SDVYVCNSLIVMYMKLGCVECAERMFDEMPVRDTVSWNSMIGGY---CSVGDGVSSLVFF 223
+D+YVC +L+ Y K G +E A ++FDEMP RD V+WN+MI G+ C + D + +
Sbjct: 136 TDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDM 195
Query: 224 KEMQNCGLRYDRFSLISALGAISIEGCLKIGKEIHCQVIKSGLEMDVMVQTSLVDMYGKC 283
+ + GL + +++ A+ G L+ GK +H + G D++V+T ++D+Y K
Sbjct: 196 RRID--GLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKS 253
Query: 284 GVVDYAERLFNMIFPRNIVAWNAMVGGYVVNAHFLESFSCLRKMLEDDN---LNPDCITI 340
+ YA R+F++ F +N V W+AM+GGYV N E+ +ML +DN + P I +
Sbjct: 254 KCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGL 313
Query: 341 INLLPSCTKLGALLEGKSIHGYAIRKGFLPNVALETALIDMYAGSGALKMTEKLFGSMIE 400
I L C + G L G+ +H YA++ GF+ ++ ++ +I YA G+L + F +
Sbjct: 314 I--LMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGL 371
Query: 401 KNLVSWNAMIAAYVRNGQNREAMELFQDLWSEPLKPDAMTFASILPAYAEIATLSDSMQI 460
K+++S+N++I V N + E+ LF ++ + ++PD T +L A + +A L
Sbjct: 372 KDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSC 431
Query: 461 HSLITKLGLVSNIYISNSIVYMYAKCGDLQTA---------RDVVSWNVIIMAYAIHGLG 511
H G N I N+++ MY KCG L A RD+VSWN ++ + IHGLG
Sbjct: 432 HGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLG 491
Query: 512 KISIQLFSEMREKGIKPNESTFVSLLSSCSISGMVDEGWNYFDSM-RKDYGIVPGIEHYG 570
K ++ LF+ M+E G+ P+E T +++LS+CS SG+VDEG F+SM R D+ ++P I+HY
Sbjct: 492 KEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYN 551
Query: 571 CIIDLLGRIGNLDQAKRFIEEMPSAPTARIWGALLTA--SRKNNDIVSAEFAARHVLSSA 628
C+ DLL R G LD+A F+ +MP P R+ G LL+A + KN ++ E + + + S
Sbjct: 552 CMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAEL-GNEVSKK--MQSL 608
Query: 629 QDNTGCYVLLSNMYAEAGRWEDVEQIKAIMEKEGLKKTTGCS 670
+ T VLLSN Y+ A RWED +I+ I +K GL KT G S
Sbjct: 609 GETTESLVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYS 650
Score = 211 bits (537), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 145/473 (30%), Positives = 238/473 (50%), Gaps = 27/473 (5%)
Query: 140 VIKACAGLLYLSEGEKVHGSLFKSGLN-SDVYVCNSLIVMYMKLGCVECAERMFDEMPVR 198
+++ C L G+ +H L K L S V +L +Y VE A +FDE+P
Sbjct: 5 LLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPHP 64
Query: 199 --DTVSWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKIGKE 256
+ ++W+ MI Y S +L + +M N G+R +++ L A + + GK
Sbjct: 65 RINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKL 124
Query: 257 IHCQVIKSGLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVVNAH 316
IH V S D+ V T+LVD Y KCG ++ A ++F+ + R++VAWNAM+ G+ ++
Sbjct: 125 IHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCC 184
Query: 317 FLESFSCLRKMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGFLPNVALET 376
+ M D L+P+ TI+ + P+ + GAL EGK++HGY R GF ++ ++T
Sbjct: 185 LTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKT 244
Query: 377 ALIDMYAGSGALKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMELFQDLWSEP--- 433
++D+YA S + ++F +KN V+W+AMI YV N +EA E+F +
Sbjct: 245 GILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVA 304
Query: 434 -LKPDAMTFASILPAYAEIATLSDSMQIHSLITKLGLVSNIYISNSIVYMYAKCGDLQTA 492
+ P A+ IL A LS +H K G + ++ + N+I+ YAK G L A
Sbjct: 305 MVTPVAIGL--ILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDA 362
Query: 493 ---------RDVVSWNVIIMAYAIHGLGKISIQLFSEMREKGIKPNESTFVSLLSSCSIS 543
+DV+S+N +I ++ + S +LF EMR GI+P+ +T + +L++CS
Sbjct: 363 FRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHL 422
Query: 544 GMVDEGWNYFDSMRKDYGIVPG--IEHYGC--IIDLLGRIGNLDQAKRFIEEM 592
+ G S Y +V G + C ++D+ + G LD AKR + M
Sbjct: 423 AALGHG-----SSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTM 470
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 396 bits (1018), Expect = e-109, Method: Compositional matrix adjust.
Identities = 232/740 (31%), Positives = 389/740 (52%), Gaps = 21/740 (2%)
Query: 79 VSSGSMESACYLFEKMSYLDTYIWNVVIRGFVDNGLFQEAVEFHHRMVCEGFK---ADYF 135
V +G + SA LF+ M W +++ + N F EA + +M C D+
Sbjct: 90 VKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQM-CRSSSCTLPDHV 148
Query: 136 TYPFVIKACAGLLYLSEGEKVHGSLFKSGLNSDVY--VCNSLIVMYMKLGCVECAERMFD 193
T+ ++ C + + +VH K G +++ + V N L+ Y ++ ++ A +F+
Sbjct: 149 TFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFE 208
Query: 194 EMPVRDTVSWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKI 253
E+P +D+V++N++I GY G S+ F +M+ G + F+ L A+ +
Sbjct: 209 EIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFAL 268
Query: 254 GKEIHCQVIKSGLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVV 313
G+++H + +G D V ++D Y K V LF+ + + V++N ++ Y
Sbjct: 269 GQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQ 328
Query: 314 NAHFLESFSCLRKM--LEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGFLPN 371
+ S R+M + D N T++++ L +L G+ +H A+
Sbjct: 329 ADQYEASLHFFREMQCMGFDRRNFPFATMLSI---AANLSSLQMGRQLHCQALLATADSI 385
Query: 372 VALETALIDMYAGSGALKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMELFQDLWS 431
+ + +L+DMYA + E +F S+ ++ VSW A+I+ YV+ G + ++LF +
Sbjct: 386 LHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRG 445
Query: 432 EPLKPDAMTFASILPAYAEIATLSDSMQIHSLITKLGLVSNIYISNSIVYMYAKCGDLQT 491
L+ D TFA++L A A A+L Q+H+ I + G + N++ + +V MYAKCG ++
Sbjct: 446 SNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKD 505
Query: 492 A---------RDVVSWNVIIMAYAIHGLGKISIQLFSEMREKGIKPNESTFVSLLSSCSI 542
A R+ VSWN +I A+A +G G+ +I F++M E G++P+ + + +L++CS
Sbjct: 506 AVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSH 565
Query: 543 SGMVDEGWNYFDSMRKDYGIVPGIEHYGCIIDLLGRIGNLDQAKRFIEEMPSAPTARIWG 602
G V++G YF +M YGI P +HY C++DLLGR G +A++ ++EMP P +W
Sbjct: 566 CGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWS 625
Query: 603 ALLTASRKNNDIVSAEFAARHVLSSAQ-DNTGCYVLLSNMYAEAGRWEDVEQIKAIMEKE 661
++L A R + + AE AA + S + + YV +SN+YA AG WE V +K M +
Sbjct: 626 SVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRER 685
Query: 662 GLKKTTGCSMFEKNGETHRFINQDRSHSKTYLIYNVLDILLRKIGEDFYIHNVSKFSPAH 721
G+KK S E N + H F + D++H I ++ L +I + Y + S
Sbjct: 686 GIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDV 745
Query: 722 LMKNRAKSPHHHSVRLAISFGLISTSVGNPVLVRNNTRICEDCHSAVKKISEITKRELIV 781
+ + +S +HS RLA++F LIST G P++V N R C DCH+A+K IS+I KRE+ V
Sbjct: 746 DEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITV 805
Query: 782 RDPKCFHHFRNGCCSCGDYW 801
RD FHHF G CSCGDYW
Sbjct: 806 RDTSRFHHFSEGVCSCGDYW 825
Score = 155 bits (393), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 122/505 (24%), Positives = 227/505 (44%), Gaps = 24/505 (4%)
Query: 124 RMVCEGFKADYFTYPFVIKACAGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLG 183
R++ GF D F+++ +S KV+ + + + N++I ++K G
Sbjct: 38 RIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEM----PHKNTVSTNTMISGHVKTG 93
Query: 184 CVECAERMFDEMPVRDTVSWNSMIGGYCSVGDGVSSLVFFKEM---QNCGLRYDRFSLIS 240
V A +FD MP R V+W ++G Y + F++M +C L D + +
Sbjct: 94 DVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLP-DHVTFTT 152
Query: 241 ALGAISIEGCLKIGKEIHCQVIKSGLEMDVMVQTSLVDMYGKCGV--VDYAERLFNMIFP 298
L + ++H +K G + + + S V + C V +D A LF I
Sbjct: 153 LLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPE 212
Query: 299 RNIVAWNAMVGGYVVNAHFLESFSCLRKMLEDDNLNPDCITIINLLPSCTKLGALLEGKS 358
++ V +N ++ GY + + ES KM + + P T +L + L G+
Sbjct: 213 KDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGH-QPSDFTFSGVLKAVVGLHDFALGQQ 271
Query: 359 IHGYAIRKGFLPNVALETALIDMYAGSGALKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQ 418
+H ++ GF + ++ ++D Y+ + T LF M E + VS+N +I++Y + Q
Sbjct: 272 LHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQ 331
Query: 419 NREAMELFQDLWSEPLKPDAMTFASILPAYAEIATLSDSMQIHSLITKLGLVSNIYISNS 478
++ F+++ FA++L A +++L Q+H S +++ NS
Sbjct: 332 YEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNS 391
Query: 479 IVYMYAKCGDLQTA---------RDVVSWNVIIMAYAIHGLGKISIQLFSEMREKGIKPN 529
+V MYAKC + A R VSW +I Y GL ++LF++MR ++ +
Sbjct: 392 LVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRAD 451
Query: 530 ESTFVSLL-SSCSISGMVDEGWNYFDSMRKDYGIVPGIEHYGCIIDLLGRIGNLDQAKRF 588
+STF ++L +S S + ++ + +R G + + ++D+ + G++ A +
Sbjct: 452 QSTFATVLKASASFASLLLGKQLHAFIIRS--GNLENVFSGSGLVDMYAKCGSIKDAVQV 509
Query: 589 IEEMPSAPTARIWGALLTASRKNND 613
EEMP A W AL++A N D
Sbjct: 510 FEEMPDR-NAVSWNALISAHADNGD 533
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 98/233 (42%), Gaps = 44/233 (18%)
Query: 351 GALLEGKSIHGYAIRKGFLPNVALETALIDMYAGSGALKMTEKLFGSMIEKNLVSWNAMI 410
L+ + + I+ GF + +++ G + K++ M KN VS N MI
Sbjct: 27 ATFLDTRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMI 86
Query: 411 AAYVRNGQNREAMELFQDL-------WS-------------EPLK-------------PD 437
+ +V+ G A +LF + W+ E K PD
Sbjct: 87 SGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPD 146
Query: 438 AMTFASILPAYAEIATLSDSMQIHSLITKLGLVSNIY--ISNSIVYMYAKCGDLQTA--- 492
+TF ++LP + + Q+H+ KLG +N + +SN ++ Y + L A
Sbjct: 147 HVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVL 206
Query: 493 ------RDVVSWNVIIMAYAIHGLGKISIQLFSEMREKGIKPNESTFVSLLSS 539
+D V++N +I Y GL SI LF +MR+ G +P++ TF +L +
Sbjct: 207 FEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 395 bits (1014), Expect = e-108, Method: Compositional matrix adjust.
Identities = 220/659 (33%), Positives = 373/659 (56%), Gaps = 13/659 (1%)
Query: 82 GSMESACYLFEKMSYLDTYIWNVVIRGFVDNGLFQEAVEFHHRMVCEGFKADYFTYPFVI 141
G ++ LF+++ D IWNV++ G+ G ++ M + + T+ V+
Sbjct: 187 GKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVL 246
Query: 142 KACAGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPVRDTV 201
CA L + G ++HG + SG++ + + NSL+ MY K G + A ++F M DTV
Sbjct: 247 SVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTV 306
Query: 202 SWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKIGKEIHCQV 261
+WN MI GY G SL FF EM + G+ D + S L ++S L+ K+IHC +
Sbjct: 307 TWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYI 366
Query: 262 IKSGLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVVNAHFLESF 321
++ + +D+ + ++L+D Y KC V A+ +F+ ++V + AM+ GY+ N +++S
Sbjct: 367 MRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSL 426
Query: 322 SCLRKMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGFLPNVALETALIDM 381
R +++ ++P+ IT++++LP L AL G+ +HG+ I+KGF + A+IDM
Sbjct: 427 EMFRWLVKV-KISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDM 485
Query: 382 YAGSGALKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMELFQDLWSEPLKPDAMTF 441
YA G + + ++F + ++++VSWN+MI ++ A+++F+ + + D ++
Sbjct: 486 YAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSI 545
Query: 442 ASILPAYAEIATLSDSMQIHSLITKLGLVSNIYISNSIVYMYAKCGDLQTA--------- 492
++ L A A + + S IH + K L S++Y ++++ MYAKCG+L+ A
Sbjct: 546 SAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKE 605
Query: 493 RDVVSWNVIIMAYAIHGLGKISIQLFSEMREK-GIKPNESTFVSLLSSCSISGMVDEGWN 551
+++VSWN II A HG K S+ LF EM EK GI+P++ TF+ ++SSC G VDEG
Sbjct: 606 KNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVR 665
Query: 552 YFDSMRKDYGIVPGIEHYGCIIDLLGRIGNLDQAKRFIEEMPSAPTARIWGALLTASRKN 611
+F SM +DYGI P EHY C++DL GR G L +A ++ MP P A +WG LL A R +
Sbjct: 666 FFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLH 725
Query: 612 NDIVSAEFAARHVLSSAQDNTGCYVLLSNMYAEAGRWEDVEQIKAIMEKEGLKKTTGCSM 671
++ AE A+ ++ N+G YVL+SN +A A WE V +++++M++ ++K G S
Sbjct: 726 KNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSW 785
Query: 672 FEKNGETHRFINQDRSHSKTYLIYNVLDILLRKIGEDFYIHNVSKFSPAHLMKNRAKSP 730
E N TH F++ D +H ++ IY++L+ LL ++ + YI + P H +R P
Sbjct: 786 IEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELRLEGYIPQ--PYLPLHPESSRKVYP 842
Score = 236 bits (603), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 158/556 (28%), Positives = 266/556 (47%), Gaps = 14/556 (2%)
Query: 63 SIGPRNITKTRALQELVSSGSMESACYLFEKMSYLDTYI--WNVVIRGFVDNGLFQEAVE 120
SI + T R L GS +F ++ + I WN +I FV NGL +A+
Sbjct: 65 SISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALA 124
Query: 121 FHHRMVCEGFKADYFTYPFVIKACAGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYM 180
F+ +M+C G D T+P ++KAC L + + ++ G++ + +V +SLI Y+
Sbjct: 125 FYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYL 184
Query: 181 KLGCVECAERMFDEMPVRDTVSWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLIS 240
+ G ++ ++FD + +D V WN M+ GY G S + F M+ + + +
Sbjct: 185 EYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDC 244
Query: 241 ALGAISIEGCLKIGKEIHCQVIKSGLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRN 300
L + + + +G ++H V+ SG++ + ++ SL+ MY KCG D A +LF M+ +
Sbjct: 245 VLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRAD 304
Query: 301 IVAWNAMVGGYVVNAHFLESFSCLRKMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIH 360
V WN M+ GYV + ES + +M+ L PD IT +LLPS +K L K IH
Sbjct: 305 TVTWNCMISGYVQSGLMEESLTFFYEMISSGVL-PDAITFSSLLPSVSKFENLEYCKQIH 363
Query: 361 GYAIRKGFLPNVALETALIDMYAGSGALKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNR 420
Y +R ++ L +ALID Y + M + +F ++V + AMI+ Y+ NG
Sbjct: 364 CYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYI 423
Query: 421 EAMELFQDLWSEPLKPDAMTFASILPAYAEIATLSDSMQIHSLITKLGLVSNIYISNSIV 480
+++E+F+ L + P+ +T SILP + L ++H I K G + I +++
Sbjct: 424 DSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVI 483
Query: 481 YMYAKCGDLQTA---------RDVVSWNVIIMAYAIHGLGKISIQLFSEMREKGIKPNES 531
MYAKCG + A RD+VSWN +I A +I +F +M GI +
Sbjct: 484 DMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCV 543
Query: 532 TFVSLLSSCSISGMVDEGWNYFDSMRKDYGIVPGIEHYGCIIDLLGRIGNLDQAKRFIEE 591
+ + LS+C+ G M K + + + +ID+ + GNL A +
Sbjct: 544 SISAALSACANLPSESFGKAIHGFMIK-HSLASDVYSESTLIDMYAKCGNLKAAMNVFKT 602
Query: 592 MPSAPTARIWGALLTA 607
M W +++ A
Sbjct: 603 MKEKNIVS-WNSIIAA 617
Score = 166 bits (420), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 125/504 (24%), Positives = 242/504 (48%), Gaps = 42/504 (8%)
Query: 139 FVIKACAGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPVR 198
+++AC+ L +G++VH L + ++ D Y ++ MY G +MF + +R
Sbjct: 40 LLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLR 99
Query: 199 DTV--SWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKI--- 253
+ WNS+I + G +L F+ +M G+ D +S + ++ C+ +
Sbjct: 100 RSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPD----VSTFPCL-VKACVALKNF 154
Query: 254 -GKEIHCQVIKS-GLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGY 311
G + + S G++ + V +SL+ Y + G +D +LF+ + ++ V WN M+ GY
Sbjct: 155 KGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGY 214
Query: 312 VVNAHF---LESFSCLRKMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGF 368
++ FS +R D ++P+ +T +L C + G +HG + G
Sbjct: 215 AKCGALDSVIKGFSVMRM----DQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGV 270
Query: 369 LPNVALETALIDMYAGSGALKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMELFQD 428
+++ +L+ MY+ G KLF M + V+WN MI+ YV++G E++ F +
Sbjct: 271 DFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYE 330
Query: 429 LWSEPLKPDAMTFASILPAYAEIATLSDSMQIHSLITKLGLVSNIYISNSIVYMYAKCGD 488
+ S + PDA+TF+S+LP+ ++ L QIH I + + +I+++++++ Y KC
Sbjct: 331 MISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRG 390
Query: 489 LQTAR---------DVVSWNVIIMAYAIHGLGKISIQLFSEMREKGIKPNESTFVSLLSS 539
+ A+ DVV + +I Y +GL S+++F + + I PNE T VS+L
Sbjct: 391 VSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPV 450
Query: 540 CSISGMVDEGWNYFDSMRKDYGIV--PGIE---HYGC-IIDLLGRIGNLDQAKRFIEEMP 593
I + G R+ +G + G + + GC +ID+ + G ++ A E +
Sbjct: 451 IGILLALKLG-------RELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLS 503
Query: 594 SAPTARIWGALLTASRKNNDIVSA 617
W +++T ++++ +A
Sbjct: 504 KRDIVS-WNSMITRCAQSDNPSAA 526
Score = 35.4 bits (80), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/154 (20%), Positives = 71/154 (46%), Gaps = 7/154 (4%)
Query: 61 KKSIGPRNITKTRALQELVSSGSMESACYLFEKMSYLDTYIWNVVIRGFVDNGLFQEAVE 120
K S+ +++ + G++++A +F+ M + WN +I ++G ++++
Sbjct: 570 KHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLC 629
Query: 121 FHHRMVCE-GFKADYFTYPFVIKACAGLLYLSEGEKVHGSLFKS-GL--NSDVYVCNSLI 176
H MV + G + D T+ +I +C + + EG + S+ + G+ + Y C ++
Sbjct: 630 LFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYAC--VV 687
Query: 177 VMYMKLGCVECAERMFDEMPV-RDTVSWNSMIGG 209
++ + G + A MP D W +++G
Sbjct: 688 DLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGA 721
>sp|Q9M2Y7|PP274_ARATH Pentatricopeptide repeat-containing protein At3g49710
OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1
Length = 721
Score = 394 bits (1013), Expect = e-108, Method: Compositional matrix adjust.
Identities = 226/662 (34%), Positives = 370/662 (55%), Gaps = 27/662 (4%)
Query: 161 FKSGLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPVRDTVSWNSMIGGYCSVGDGVSSL 220
F S +V+ N ++ Y K + A ++FDE+P DTVS+N++I GY + +++
Sbjct: 66 FYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAM 125
Query: 221 VFFKEMQNCGLRYDRFSLISALGAISIEGCLKIG--KEIHCQVIKSGLEMDVMVQTSLVD 278
V FK M+ G D F+L + A C ++ K++HC + G + V + V
Sbjct: 126 VLFKRMRKLGFEVDGFTLSGLIAAC----CDRVDLIKQLHCFSVSGGFDSYSSVNNAFVT 181
Query: 279 MYGKCGVVDYAERLF-NMIFPRNIVAWNAMVGGYVVNAHFLESFSCLRKMLEDDNLNPDC 337
Y K G++ A +F M R+ V+WN+M+ Y + ++ + ++M+ D
Sbjct: 182 YYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFK-GFKIDM 240
Query: 338 ITIINLLPSCTKLGALLEGKSIHGYAIRKGFLPNVALETALIDMYA---GSGALKMTEKL 394
T+ ++L + T L L+ G+ HG I+ GF N + + LID Y+ G + +EK+
Sbjct: 241 FTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKV 300
Query: 395 FGSMIEKNLVSWNAMIAAYVRNGQ-NREAMELFQDLWSEPLKPDAMTFASILPAYAEIAT 453
F ++ +LV WN MI+ Y N + + EA++ F+ + +PD +F + A + +++
Sbjct: 301 FQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSS 360
Query: 454 LSDSMQIHSLITKLGLVSN-IYISNSIVYMYAKCGDLQTAR---------DVVSWNVIIM 503
S QIH L K + SN I ++N+++ +Y K G+LQ AR + VS+N +I
Sbjct: 361 PSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIK 420
Query: 504 AYAIHGLGKISIQLFSEMREKGIKPNESTFVSLLSSCSISGMVDEGWNYFDSMRKDYGIV 563
YA HG G ++ L+ M + GI PN+ TFV++LS+C+ G VDEG YF++M++ + I
Sbjct: 421 GYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIE 480
Query: 564 PGIEHYGCIIDLLGRIGNLDQAKRFIEEMPSAPTARIWGALLTASRKNNDIVSAEFAARH 623
P EHY C+IDLLGR G L++A+RFI+ MP P + W ALL A RK+ ++ AE AA
Sbjct: 481 PEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANE 540
Query: 624 VLSSAQDNTGCYVLLSNMYAEAGRWEDVEQIKAIMEKEGLKKTTGCSMFEKNGETHRFIN 683
++ YV+L+NMYA+A +WE++ ++ M + ++K GCS E + H F+
Sbjct: 541 LMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVA 600
Query: 684 QDRSHSKTYLIYNVLDILLRKIGEDFYIHNVSKFSPAHLMKNRAKSPH----HHSVRLAI 739
+D SH + L+ +++K+ + Y+ + K++ + HHS +LA+
Sbjct: 601 EDWSHPMIREVNEYLEEMMKKMKKVGYVMD-KKWAMVKEDEAGEGDEEMRLGHHSEKLAV 659
Query: 740 SFGLISTSVGNPVLVRNNTRICEDCHSAVKKISEITKRELIVRDPKCFHHFRNGCCSCGD 799
+FGL+ST G ++V N RIC DCH+A+K +S + RE+IVRD FH F++G CSCGD
Sbjct: 660 AFGLMSTRDGEELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGD 719
Query: 800 YW 801
YW
Sbjct: 720 YW 721
Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 117/404 (28%), Positives = 196/404 (48%), Gaps = 22/404 (5%)
Query: 82 GSMESACYLFEKMSYL-DTYIWNVVIRGFVDNGLFQEAVEFHHRMVCEGFKADYFTYPFV 140
G + A +F M L D WN +I + + +A+ + M+ +GFK D FT V
Sbjct: 187 GLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASV 246
Query: 141 IKACAGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVEC---AERMFDEMPV 197
+ A L +L G + HG L K+G + + +V + LI Y K G + +E++F E+
Sbjct: 247 LNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILS 306
Query: 198 RDTVSWNSMIGGYCSVGDGVS--SLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKIGK 255
D V WN+MI GY S+ + +S ++ F++MQ G R D S + A S K
Sbjct: 307 PDLVVWNTMISGY-SMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCK 365
Query: 256 EIHCQVIKSGLEMD-VMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVVN 314
+IH IKS + + + V +L+ +Y K G + A +F+ + N V++N M+ GY +
Sbjct: 366 QIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQH 425
Query: 315 AHFLESFSCLRKMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGFL--PNV 372
H E+ ++ML D + P+ IT + +L +C G + EG+ +++ F P
Sbjct: 426 GHGTEALLLYQRML-DSGIAPNKITFVAVLSACAHCGKVDEGQEYFN-TMKETFKIEPEA 483
Query: 373 ALETALIDMYAGSGALKMTEKLFGSMIEK-NLVSWNAMIAAYVRNGQN-----REAMEL- 425
+ +ID+ +G L+ E+ +M K V+W A++ A R +N R A EL
Sbjct: 484 EHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGA-CRKHKNMALAERAANELM 542
Query: 426 -FQDLWSEPLKPDAMTFASILPAYAEIATLSDSMQIHSLITKLG 468
Q L + P A +A + E+A++ SM+ + K G
Sbjct: 543 VMQPLAATPYVMLANMYADA-RKWEEMASVRKSMRGKRIRKKPG 585
Score = 117 bits (294), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/390 (24%), Positives = 171/390 (43%), Gaps = 52/390 (13%)
Query: 251 LKIGKEIHCQVIKSGLEMDVMVQTSLVDMYGKCGVVDY---------------------- 288
L GK +H +KS + + V++Y KCG + Y
Sbjct: 24 LFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKA 83
Query: 289 ---------AERLFNMIFPRNIVAWNAMVGGYVVNAHFLESFSC--LRKMLEDDNLNPDC 337
A +LF+ I + V++N ++ GY A E+F+ L K + D
Sbjct: 84 YAKDSKIHIARQLFDEIPQPDTVSYNTLISGY---ADARETFAAMVLFKRMRKLGFEVDG 140
Query: 338 ITIINLLPSCTKLGALLEGKSIHGYAIRKGFLPNVALETALIDMYAGSGALKMTEKLFGS 397
T+ L+ +C L+ K +H +++ GF ++ A + Y+ G L+ +F
Sbjct: 141 FTLSGLIAACCDRVDLI--KQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYG 198
Query: 398 MIE-KNLVSWNAMIAAYVRNGQNREAMELFQDLWSEPLKPDAMTFASILPAYAEIATLSD 456
M E ++ VSWN+MI AY ++ + +A+ L++++ + K D T AS+L A + L
Sbjct: 199 MDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIG 258
Query: 457 SMQIHSLITKLGLVSNIYISNSIVYMYAKCGDLQ------------TARDVVSWNVIIMA 504
Q H + K G N ++ + ++ Y+KCG + D+V WN +I
Sbjct: 259 GRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISG 318
Query: 505 YAIH-GLGKISIQLFSEMREKGIKPNESTFVSLLSSCSISGMVDEGWNYFDSMRKDYGIV 563
Y+++ L + +++ F +M+ G +P++ +FV + S+CS + K +
Sbjct: 319 YSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPS 378
Query: 564 PGIEHYGCIIDLLGRIGNLDQAKRFIEEMP 593
I +I L + GNL A+ + MP
Sbjct: 379 NRISVNNALISLYYKSGNLQDARWVFDRMP 408
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 86/168 (51%), Gaps = 10/168 (5%)
Query: 47 SKSTHIHKNQTITSKKSIGPRNITKTRALQELV-SSGSMESACYLFEKMSYLDTYIWNVV 105
S+ IH + K I I+ AL L SG+++ A ++F++M L+ +N +
Sbjct: 362 SQCKQIH---GLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCM 418
Query: 106 IRGFVDNGLFQEAVEFHHRMVCEGFKADYFTYPFVIKACAGLLYLSEGEKVHGSL---FK 162
I+G+ +G EA+ + RM+ G + T+ V+ ACA + EG++ ++ FK
Sbjct: 419 IKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFK 478
Query: 163 SGLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPVR-DTVSWNSMIGG 209
++ Y C +I + + G +E AER D MP + +V+W +++G
Sbjct: 479 IEPEAEHYSC--MIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGA 524
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 68/154 (44%), Gaps = 13/154 (8%)
Query: 440 TFASILPAYAEIATLSDSMQIHSLITKLGLVSNIYISNSIVYMYAKCGDLQTAR------ 493
TF +L L +H+L K + S+ Y+SN V +Y+KCG L AR
Sbjct: 10 TFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYST 69
Query: 494 ---DVVSWNVIIMAYAIHGLGKISIQLFSEMREKGIKPNESTFVSLLSSCSISGMVDEGW 550
+V S+NVI+ AYA I+ QLF E+ + P+ ++ +L+S + +
Sbjct: 70 EEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQ----PDTVSYNTLISGYADARETFAAM 125
Query: 551 NYFDSMRKDYGIVPGIEHYGCIIDLLGRIGNLDQ 584
F MRK V G G I R+ + Q
Sbjct: 126 VLFKRMRKLGFEVDGFTLSGLIAACCDRVDLIKQ 159
>sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protein At3g46790,
chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1
Length = 657
Score = 394 bits (1013), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/560 (36%), Positives = 318/560 (56%), Gaps = 16/560 (2%)
Query: 257 IHCQVIKSGLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVVNAH 316
+H ++ +G + D + T L+ MY G VDYA ++F+ R I WNA+ + H
Sbjct: 99 VHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGH 158
Query: 317 FLESFSCLRKM----LEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGFLPNV 372
E KM +E D + + CT + L++GK IH + R+G+ +V
Sbjct: 159 GEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECT-VNHLMKGKEIHAHLTRRGYSSHV 217
Query: 373 ALETALIDMYAGSGALKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMELFQDLWSE 432
+ T L+DMYA G + +FG M +N+VSW+AMIA Y +NG+ EA+ F+++ E
Sbjct: 218 YIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRE 277
Query: 433 PL--KPDAMTFASILPAYAEIATLSDSMQIHSLITKLGLVSNIYISNSIVYMYAKCGDLQ 490
P+++T S+L A A +A L IH I + GL S + + +++V MY +CG L+
Sbjct: 278 TKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLE 337
Query: 491 TA---------RDVVSWNVIIMAYAIHGLGKISIQLFSEMREKGIKPNESTFVSLLSSCS 541
RDVVSWN +I +Y +HG GK +IQ+F EM G P TFVS+L +CS
Sbjct: 338 VGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACS 397
Query: 542 ISGMVDEGWNYFDSMRKDYGIVPGIEHYGCIIDLLGRIGNLDQAKRFIEEMPSAPTARIW 601
G+V+EG F++M +D+GI P IEHY C++DLLGR LD+A + +++M + P ++W
Sbjct: 398 HEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVW 457
Query: 602 GALLTASRKNNDIVSAEFAARHVLSSAQDNTGCYVLLSNMYAEAGRWEDVEQIKAIMEKE 661
G+LL + R + ++ AE A+R + + N G YVLL+++YAEA W++V+++K ++E
Sbjct: 458 GSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHR 517
Query: 662 GLKKTTGCSMFEKNGETHRFINQDRSHSKTYLIYNVLDILLRKIGEDFYIHNVSKFSPAH 721
GL+K G E + + F++ D + I+ L L + E YI
Sbjct: 518 GLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYEL 577
Query: 722 LMKNRAKSPHHHSVRLAISFGLISTSVGNPVLVRNNTRICEDCHSAVKKISEITKRELIV 781
+ + + HS +LA++FGLI+TS G P+ + N R+CEDCH K IS+ ++E++V
Sbjct: 578 ETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILV 637
Query: 782 RDPKCFHHFRNGCCSCGDYW 801
RD FH F+NG CSCGDYW
Sbjct: 638 RDVNRFHRFKNGVCSCGDYW 657
Score = 177 bits (449), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 109/397 (27%), Positives = 206/397 (51%), Gaps = 12/397 (3%)
Query: 82 GSMESACYLFEKMSYLDTYIWNVVIRGFVDNGLFQEAVEFHHRMVCEGFKADYFTYPFVI 141
GS++ A +F+K Y+WN + R G +E + + +M G ++D FTY +V+
Sbjct: 126 GSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVL 185
Query: 142 KACAG----LLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPV 197
KAC + +L +G+++H L + G +S VY+ +L+ MY + GCV+ A +F MPV
Sbjct: 186 KACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPV 245
Query: 198 RDTVSWNSMIGGYCSVGDGVSSLVFFKEM--QNCGLRYDRFSLISALGAISIEGCLKIGK 255
R+ VSW++MI Y G +L F+EM + + +++S L A + L+ GK
Sbjct: 246 RNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGK 305
Query: 256 EIHCQVIKSGLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVVNA 315
IH +++ GL+ + V ++LV MYG+CG ++ +R+F+ + R++V+WN+++ Y V+
Sbjct: 306 LIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHG 365
Query: 316 HFLESFSCLRKMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRK-GFLPNVAL 374
+ ++ +ML + +P +T +++L +C+ G + EGK + R G P +
Sbjct: 366 YGKKAIQIFEEMLA-NGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEH 424
Query: 375 ETALIDMYAGSGALKMTEKLFGSM-IEKNLVSWNAMIAAYVRNGQNREAMELFQDLWSEP 433
++D+ + L K+ M E W +++ + +G A + L++
Sbjct: 425 YACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFA-- 482
Query: 434 LKP-DAMTFASILPAYAEIATLSDSMQIHSLITKLGL 469
L+P +A + + YAE + ++ L+ GL
Sbjct: 483 LEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGL 519
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 394 bits (1011), Expect = e-108, Method: Compositional matrix adjust.
Identities = 215/650 (33%), Positives = 353/650 (54%), Gaps = 49/650 (7%)
Query: 199 DTVSWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKIGKEIH 258
+++ +N + + ++++F++ +++ G R D+FS + L A+S L G E+H
Sbjct: 75 ESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELH 134
Query: 259 CQVIKSGLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVVNAHFL 318
K D V+T +DMY CG ++YA +F+ + R++V WN M+ Y
Sbjct: 135 GVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVD 194
Query: 319 ESFSCLRKMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGFLPNVALETAL 378
E+F +M +D N+ PD + + N++ +C + G + ++I+ + I + L TAL
Sbjct: 195 EAFKLFEEM-KDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTAL 253
Query: 379 IDMYAGSGALKMTEKLFGSMI-------------------------------EKNLVSWN 407
+ MYAG+G + M + F M +K+LV W
Sbjct: 254 VTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWT 313
Query: 408 AMIAAYVRNGQNREAMELFQDLWSEPLKPDAMTFASILPAYAEIATLSDSMQIHSLITKL 467
MI+AYV + +EA+ +F+++ +KPD ++ S++ A A + L + +HS I
Sbjct: 314 TMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVN 373
Query: 468 GLVSNIYISNSIVYMYAKCGDLQTARDV---------VSWNVIIMAYAIHGLGKISIQLF 518
GL S + I+N+++ MYAKCG L RDV VSW+ +I A ++HG ++ LF
Sbjct: 374 GLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLF 433
Query: 519 SEMREKGIKPNESTFVSLLSSCSISGMVDEGWNYFDSMRKDYGIVPGIEHYGCIIDLLGR 578
+ M+++ ++PNE TFV +L CS SG+V+EG F SM +Y I P +EHYGC++DL GR
Sbjct: 434 ARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGR 493
Query: 579 IGNLDQAKRFIEEMPSAPTARIWGALLTASRKNNDIVSAEFAARHVLSSAQDNTGCYVLL 638
L +A IE MP A IWG+L++A R + ++ +FAA+ +L D+ G VL+
Sbjct: 494 ANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLM 553
Query: 639 SNMYAEAGRWEDVEQIKAIMEKEGLKKTTGCSMFEKNGETHRFINQDRSHSKTYLIYNVL 698
SN+YA RWEDV I+ +ME++ + K G S ++NG++H F+ D+ H ++ IY L
Sbjct: 554 SNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKL 613
Query: 699 DILLRKIGEDFYIHNVSKFSPAHLMKNRAKSPHHHSVRLAISFGLIST-------SVGNP 751
D ++ K+ Y+ + + + HS +LA+ FGL++ S G
Sbjct: 614 DEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGVI 673
Query: 752 VLVRNNTRICEDCHSAVKKISEITKRELIVRDPKCFHHFRNGCCSCGDYW 801
+V+ N R+CEDCH K +S++ +RE+IVRD FH ++NG CSC DYW
Sbjct: 674 RIVK-NLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722
Score = 175 bits (444), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 119/484 (24%), Positives = 227/484 (46%), Gaps = 45/484 (9%)
Query: 98 DTYIWNVVIRGFVDNGLFQEAVEFHHRMVCEGFKADYFTYPFVIKACAGLLYLSEGEKVH 157
++ ++N +R + + + F+ R+ G + D F++ ++KA + + L EG ++H
Sbjct: 75 ESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELH 134
Query: 158 GSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPVRDTVSWNSMIGGYCSVGDGV 217
G FK D +V + MY G + A +FDEM RD V+WN+MI YC G
Sbjct: 135 GVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVD 194
Query: 218 SSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKIGKEIHCQVIKSGLEMDVMVQTSLV 277
+ F+EM++ + D L + + A G ++ + I+ +I++ + MD + T+LV
Sbjct: 195 EAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALV 254
Query: 278 DMYG-------------------------------KCGVVDYAERLFNMIFPRNIVAWNA 306
MY KCG +D A+ +F+ +++V W
Sbjct: 255 TMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTT 314
Query: 307 MVGGYVVNAHFLESFSCLRKMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRK 366
M+ YV + + E+ +M + PD +++ +++ +C LG L + K +H
Sbjct: 315 MISAYVESDYPQEALRVFEEMC-CSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVN 373
Query: 367 GFLPNVALETALIDMYAGSGALKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMELF 426
G +++ ALI+MYA G L T +F M +N+VSW++MI A +G+ +A+ LF
Sbjct: 374 GLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLF 433
Query: 427 QDLWSEPLKPDAMTFASILPAYAE----------IATLSDSMQIHSLITKLGLVSNIY-I 475
+ E ++P+ +TF +L + A+++D I + G + +++
Sbjct: 434 ARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGR 493
Query: 476 SNSIVYMYAKCGDLQTARDVVSWNVIIMAYAIHGLGKISIQLFSEMREKGIKPNESTFVS 535
+N + + A +VV W ++ A IH G++ + F+ R ++P+ +
Sbjct: 494 ANLLREALEVIESMPVASNVVIWGSLMSACRIH--GELELGKFAAKRILELEPDHDGALV 551
Query: 536 LLSS 539
L+S+
Sbjct: 552 LMSN 555
>sp|O04659|PP398_ARATH Pentatricopeptide repeat-containing protein At5g27110
OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2
Length = 691
Score = 392 bits (1006), Expect = e-108, Method: Compositional matrix adjust.
Identities = 218/628 (34%), Positives = 352/628 (56%), Gaps = 13/628 (2%)
Query: 86 SACYLFEKMSYL-DTYIWNVVIRGFVDNGLFQEAVEFHHRMV-CEGFKADYFTYPFVIKA 143
SA ++FE D YIWN ++ G+ N +F + +E R++ C D FT+P VIKA
Sbjct: 57 SARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKA 116
Query: 144 CAGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPVRDTVSW 203
L G +H + KSG DV V +SL+ MY K E + ++FDEMP RD SW
Sbjct: 117 YGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASW 176
Query: 204 NSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKIGKEIHCQVIK 263
N++I + G+ +L F M++ G + SL A+ A S L+ GKEIH + +K
Sbjct: 177 NTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVK 236
Query: 264 SGLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVVNAHFLESFSC 323
G E+D V ++LVDMYGKC ++ A +F + +++VAWN+M+ GYV
Sbjct: 237 KGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEI 296
Query: 324 LRKMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGFLPNVALETALIDMYA 383
L +M+ + P T+ ++L +C++ LL GK IHGY IR ++ + +LID+Y
Sbjct: 297 LNRMIIEGT-RPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYF 355
Query: 384 GSGALKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMELFQDLWSEPLKPDAMTFAS 443
G + E +F + SWN MI++Y+ G +A+E++ + S +KPD +TF S
Sbjct: 356 KCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTS 415
Query: 444 ILPAYAEIATLSDSMQIHSLITKLGLVSNIYISNSIVYMYAKCGDLQTA---------RD 494
+LPA +++A L QIH I++ L ++ + ++++ MY+KCG+ + A +D
Sbjct: 416 VLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKD 475
Query: 495 VVSWNVIIMAYAIHGLGKISIQLFSEMREKGIKPNESTFVSLLSSCSISGMVDEGWNYFD 554
VVSW V+I AY HG + ++ F EM++ G+KP+ T +++LS+C +G++DEG +F
Sbjct: 476 VVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFS 535
Query: 555 SMRKDYGIVPGIEHYGCIIDLLGRIGNLDQAKRFIEEMP-SAPTARIWGALLTASRKNND 613
MR YGI P IEHY C+ID+LGR G L +A I++ P ++ A + L +A + +
Sbjct: 536 QMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLE 595
Query: 614 IVSAEFAARHVLSSAQDNTGCYVLLSNMYAEAGRWEDVEQIKAIMEKEGLKKTTGCSMFE 673
+ AR ++ + D+ Y++L N+YA W+ +++ M++ GL+K GCS E
Sbjct: 596 HSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIE 655
Query: 674 KNGETHRFINQDRSHSKTYLIYNVLDIL 701
+ + F +DRSH + +Y L +L
Sbjct: 656 MSDKVCHFFAEDRSHLRAENVYECLALL 683
Score = 227 bits (579), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 134/413 (32%), Positives = 221/413 (53%), Gaps = 2/413 (0%)
Query: 85 ESACYLFEKMSYLDTYIWNVVIRGFVDNGLFQEAVEFHHRMVCEGFKADYFTYPFVIKAC 144
E++ +F++M D WN VI F +G ++A+E RM GF+ + + I AC
Sbjct: 159 ENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISAC 218
Query: 145 AGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPVRDTVSWN 204
+ LL+L G+++H K G D YV ++L+ MY K C+E A +F +MP + V+WN
Sbjct: 219 SRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWN 278
Query: 205 SMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKIGKEIHCQVIKS 264
SMI GY + GD S + M G R + +L S L A S L GK IH VI+S
Sbjct: 279 SMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRS 338
Query: 265 GLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVVNAHFLESFSCL 324
+ D+ V SL+D+Y KCG + AE +F+ +WN M+ Y+ ++ ++
Sbjct: 339 VVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVY 398
Query: 325 RKMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGFLPNVALETALIDMYAG 384
+M+ + PD +T ++LP+C++L AL +GK IH + L +AL+DMY+
Sbjct: 399 DQMV-SVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSK 457
Query: 385 SGALKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMELFQDLWSEPLKPDAMTFASI 444
G K ++F S+ +K++VSW MI+AY +GQ REA+ F ++ LKPD +T ++
Sbjct: 458 CGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAV 517
Query: 445 LPAYAEIATLSDSMQIHS-LITKLGLVSNIYISNSIVYMYAKCGDLQTARDVV 496
L A + + ++ S + +K G+ I + ++ + + G L A +++
Sbjct: 518 LSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEII 570
Score = 157 bits (398), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 104/337 (30%), Positives = 170/337 (50%), Gaps = 11/337 (3%)
Query: 62 KSIGPRNITKTRALQELVSSG---------SMESACYLFEKMSYLDTYIWNVVIRGFVDN 112
K I + + K L E V+S +E A +F+KM WN +I+G+V
Sbjct: 228 KEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAK 287
Query: 113 GLFQEAVEFHHRMVCEGFKADYFTYPFVIKACAGLLYLSEGEKVHGSLFKSGLNSDVYVC 172
G + VE +RM+ EG + T ++ AC+ L G+ +HG + +S +N+D+YV
Sbjct: 288 GDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVN 347
Query: 173 NSLIVMYMKLGCVECAERMFDEMPVRDTVSWNSMIGGYCSVGDGVSSLVFFKEMQNCGLR 232
SLI +Y K G AE +F + SWN MI Y SVG+ ++ + +M + G++
Sbjct: 348 CSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVK 407
Query: 233 YDRFSLISALGAISIEGCLKIGKEIHCQVIKSGLEMDVMVQTSLVDMYGKCGVVDYAERL 292
D + S L A S L+ GK+IH + +S LE D ++ ++L+DMY KCG A R+
Sbjct: 408 PDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRI 467
Query: 293 FNMIFPRNIVAWNAMVGGYVVNAHFLESFSCLRKMLEDDNLNPDCITIINLLPSCTKLGA 352
FN I +++V+W M+ Y + E+ +M + L PD +T++ +L +C G
Sbjct: 468 FNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEM-QKFGLKPDGVTLLAVLSACGHAGL 526
Query: 353 LLEG-KSIHGYAIRKGFLPNVALETALIDMYAGSGAL 388
+ EG K + G P + + +ID+ +G L
Sbjct: 527 IDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRL 563
Score = 150 bits (378), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 161/299 (53%), Gaps = 10/299 (3%)
Query: 255 KEIHCQVIKSGLEMDVMVQTSLVDMYGKCGVVDYAERLF-NMIFPRNIVAWNAMVGGYVV 313
K +H +++ GL DV++ SL+++Y C A +F N ++ WN+++ GY
Sbjct: 24 KLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSK 83
Query: 314 NAHFLESFSCLRKMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGFLPNVA 373
N+ F ++ +++L PD T N++ + LG G+ IH ++ G++ +V
Sbjct: 84 NSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVV 143
Query: 374 LETALIDMYAGSGALKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMELFQDLWSEP 433
+ ++L+ MYA + + ++F M E+++ SWN +I+ + ++G+ +A+ELF + S
Sbjct: 144 VASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSG 203
Query: 434 LKPDAMTFASILPAYAEIATLSDSMQIHSLITKLGLVSNIYISNSIVYMYAKCGDLQTAR 493
+P++++ + A + + L +IH K G + Y+++++V MY KC L+ AR
Sbjct: 204 FEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAR 263
Query: 494 DV---------VSWNVIIMAYAIHGLGKISIQLFSEMREKGIKPNESTFVSLLSSCSIS 543
+V V+WN +I Y G K +++ + M +G +P+++T S+L +CS S
Sbjct: 264 EVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRS 322
Score = 34.3 bits (77), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 30/158 (18%), Positives = 67/158 (42%), Gaps = 13/158 (8%)
Query: 460 IHSLITKLGLVSNIYISNSIVYMYAKCGDLQTAR----------DVVSWNVIIMAYAIHG 509
+H I LGL ++ + S++ +Y C D +AR DV WN ++ Y+ +
Sbjct: 26 VHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNS 85
Query: 510 LGKISIQLFSEMREKGI-KPNESTFVSLLSSCSISGMVDEGWNYFDSMRKDYGIVPGIEH 568
+ ++++F + I P+ TF +++ + G G ++ G V +
Sbjct: 86 MFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLG-RMIHTLVVKSGYVCDVVV 144
Query: 569 YGCIIDLLGRIGNLDQAKRFIEEMPSAPTARIWGALLT 606
++ + + + + + +EMP A W +++
Sbjct: 145 ASSLVGMYAKFNLFENSLQVFDEMPERDVAS-WNTVIS 181
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 391 bits (1004), Expect = e-107, Method: Compositional matrix adjust.
Identities = 234/737 (31%), Positives = 383/737 (51%), Gaps = 15/737 (2%)
Query: 75 LQELVSSGSMESACYLFEKMSYLDTYIWNVVIRGFVDNGLFQEAVEFHHRMVCEGFKADY 134
L V +G + A LF++M + + + +G+ Q+ + + R+ EG + +
Sbjct: 91 LNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYA----CQDPIGLYSRLHREGHELNP 146
Query: 135 FTYPFVIKACAGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERMFDE 194
+ +K L +H + K G +S+ +V +LI Y G V+ A +F+
Sbjct: 147 HVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEG 206
Query: 195 MPVRDTVSWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKIG 254
+ +D V W ++ Y G SL M+ G + ++ +AL A G
Sbjct: 207 ILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFA 266
Query: 255 KEIHCQVIKSGLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVVN 314
K +H Q++K+ +D V L+ +Y + G + A ++FN + ++V W+ M+ + N
Sbjct: 267 KGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQN 326
Query: 315 AHFLESFSCLRKMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGFLPNVAL 374
E+ +M E + P+ T+ ++L C G+ +HG ++ GF ++ +
Sbjct: 327 GFCNEAVDLFIRMREA-FVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYV 385
Query: 375 ETALIDMYAGSGALKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMELFQDLWSEPL 434
ALID+YA + KLF + KN VSWN +I Y G+ +A +F++ +
Sbjct: 386 SNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQV 445
Query: 435 KPDAMTFASILPAYAEIATLSDSMQIHSLITKLGLVSNIYISNSIVYMYAKCGDLQTAR- 493
+TF+S L A A +A++ +Q+H L K + +SNS++ MYAKCGD++ A+
Sbjct: 446 SVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQS 505
Query: 494 --------DVVSWNVIIMAYAIHGLGKISIQLFSEMREKGIKPNESTFVSLLSSCSISGM 545
DV SWN +I Y+ HGLG+ ++++ M+++ KPN TF+ +LS CS +G+
Sbjct: 506 VFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGL 565
Query: 546 VDEGWNYFDSMRKDYGIVPGIEHYGCIIDLLGRIGNLDQAKRFIEEMPSAPTARIWGALL 605
+D+G F+SM +D+GI P +EHY C++ LLGR G LD+A + IE +P P+ IW A+L
Sbjct: 566 IDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAML 625
Query: 606 TASRKNNDIVSAEFAARHVLSSAQDNTGCYVLLSNMYAEAGRWEDVEQIKAIMEKEGLKK 665
+AS N+ A +A +L + YVL+SNMYA A +W +V I+ M++ G+KK
Sbjct: 626 SASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKK 685
Query: 666 TTGCSMFEKNGETHRFINQDRSHSKTYLIYNVLDILLRKIGEDFYIHNVSKFSPAHLMKN 725
G S E G+ H F H LI +L+ L K Y+ + + +
Sbjct: 686 EPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEE 745
Query: 726 RAKSPHHHSVRLAISFGLIST-SVGNPVLVRNNTRICEDCHSAVKKISEITKRELIVRDP 784
+ K HS RLA+++GL+ S N +L+ N RIC DCHSA+K IS I +R+L++RD
Sbjct: 746 KDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDM 805
Query: 785 KCFHHFRNGCCSCGDYW 801
FHHF G CSCGD+W
Sbjct: 806 NRFHHFHAGVCSCGDHW 822
Score = 172 bits (437), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 129/487 (26%), Positives = 221/487 (45%), Gaps = 22/487 (4%)
Query: 133 DYFTYPFVIKACAGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERMF 192
D Y +++ C + +H + K G D++ N L+ Y+K G + A +F
Sbjct: 48 DSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLF 107
Query: 193 DEMPVRDTVSWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLK 252
DEMP R+ VS+ ++ GY + D + + + G + S L +
Sbjct: 108 DEMPERNNVSFVTLAQGY-ACQDPIG---LYSRLHREGHELNPHVFTSFLKLFVSLDKAE 163
Query: 253 IGKEIHCQVIKSGLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYV 312
I +H ++K G + + V +L++ Y CG VD A +F I ++IV W +V YV
Sbjct: 164 ICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYV 223
Query: 313 VNAHFLES---FSCLRKMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGFL 369
N +F +S SC+R P+ T L + LGA K +HG ++ ++
Sbjct: 224 ENGYFEDSLKLLSCMRMA----GFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYV 279
Query: 370 PNVALETALIDMYAGSGALKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMELFQDL 429
+ + L+ +Y G + K+F M + ++V W+ MIA + +NG EA++LF +
Sbjct: 280 LDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRM 339
Query: 430 WSEPLKPDAMTFASILPAYAEIATLSDSMQIHSLITKLGLVSNIYISNSIVYMYAKCGDL 489
+ P+ T +SIL A Q+H L+ K+G +IY+SN+++ +YAKC +
Sbjct: 340 REAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKM 399
Query: 490 QTA---------RDVVSWNVIIMAYAIHGLGKISIQLFSEMREKGIKPNESTFVSLLSSC 540
TA ++ VSWN +I+ Y G G + +F E + E TF S L +C
Sbjct: 400 DTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGAC 459
Query: 541 SISGMVDEGWNYFDSMRKDYGIVPGIEHYGCIIDLLGRIGNLDQAKRFIEEMPSAPTARI 600
+ +D G K + +ID+ + G++ A+ EM + A
Sbjct: 460 ASLASMDLGVQVHGLAIKTNN-AKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVAS- 517
Query: 601 WGALLTA 607
W AL++
Sbjct: 518 WNALISG 524
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 389 bits (998), Expect = e-107, Method: Compositional matrix adjust.
Identities = 245/749 (32%), Positives = 398/749 (53%), Gaps = 31/749 (4%)
Query: 78 LVSSGSMESACYLFEKMSYLDTYIWNVVIRGFVDNGLFQEAVEFHHRMVC------EGFK 131
SGS+ A +F +M + N ++ G V +EA + M E +
Sbjct: 253 FAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYV 312
Query: 132 ADYFTYPFVIKACAGLLYLSEGEKVHGSLFKSGL-NSDVYVCNSLIVMYMKLGCVECAER 190
++P + A + L +G +VHG + +GL + V + N L+ MY K G + A R
Sbjct: 313 ILLSSFPEY--SLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARR 370
Query: 191 MFDEMPVRDTVSWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGC 250
+F M +D+VSWNSMI G G + ++ +K M+ + F+LIS+L + +
Sbjct: 371 VFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKW 430
Query: 251 LKIGKEIHCQVIKSGLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGG 310
K+G++IH + +K G++++V V +L+ +Y + G ++ ++F+ + + V+WN+++G
Sbjct: 431 AKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGA 490
Query: 311 YVVNAHFL-ESFSC-LRKMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGF 368
+ L E+ C L LN + + S G L GK IHG A++
Sbjct: 491 LARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGEL--GKQIHGLALKNNI 548
Query: 369 LPNVALETALIDMYAGSGALKMTEKLFGSMIEK-NLVSWNAMIAAYVRNGQNREAMELFQ 427
E ALI Y G + EK+F M E+ + V+WN+MI+ Y+ N +A++L
Sbjct: 549 ADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVW 608
Query: 428 DLWSEPLKPDAMTFASILPAYAEIATLSDSMQIHSLITKLGLVSNIYISNSIVYMYAKCG 487
+ + D+ +A++L A+A +ATL M++H+ + L S++ + +++V MY+KCG
Sbjct: 609 FMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCG 668
Query: 488 DLQTA---------RDVVSWNVIIMAYAIHGLGKISIQLFSEMREKG-IKPNESTFVSLL 537
L A R+ SWN +I YA HG G+ +++LF M+ G P+ TFV +L
Sbjct: 669 RLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVL 728
Query: 538 SSCSISGMVDEGWNYFDSMRKDYGIVPGIEHYGCIIDLLGRIGNLDQAKRFIEEMPSAPT 597
S+CS +G+++EG+ +F+SM YG+ P IEH+ C+ D+LGR G LD+ + FIE+MP P
Sbjct: 729 SACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPN 788
Query: 598 ARIWGALLTASRKNNDIVSAEF---AARHVLSSAQDNTGCYVLLSNMYAEAGRWEDVEQI 654
IW +L A + N AE AA + +N YVLL NMYA GRWED+ +
Sbjct: 789 VLIWRTVLGACCRANG-RKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKA 847
Query: 655 KAIMEKEGLKKTTGCSMFEKNGETHRFINQDRSHSKTYLIYNVLDILLRKIGEDFYIHNV 714
+ M+ +KK G S H F+ D+SH +IY L L RK+ + Y+
Sbjct: 848 RKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQ- 906
Query: 715 SKFSPAHL-MKNRAKSPHHHSVRLAISFGLISTSVGN-PVLVRNNTRICEDCHSAVKKIS 772
+ F+ L +N+ + +HS +LA++F L + P+ + N R+C DCHSA K IS
Sbjct: 907 TGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYIS 966
Query: 773 EITKRELIVRDPKCFHHFRNGCCSCGDYW 801
+I R++I+RD FHHF++G CSC D+W
Sbjct: 967 KIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 197 bits (501), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 173/637 (27%), Positives = 297/637 (46%), Gaps = 37/637 (5%)
Query: 79 VSSGSMESACYLFEKMSYLDTYIWNVVIRGFVDNGLFQEAVEFHHRMVCEGFKADYFTYP 138
+ +G SA +F++M + W ++ G+ NG +EA+ F MV EG ++ + +
Sbjct: 47 LETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFV 106
Query: 139 FVIKAC-----AGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMK-LGCVECAERMF 192
V++AC G+L+ G ++HG +FK D V N LI MY K +G V A F
Sbjct: 107 SVLRACQEIGSVGILF---GRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAF 163
Query: 193 DEMPVRDTVSWNSMIGGYCSVGDGVSSLVFFKEMQNCGLR---YDRFSLISALGAISIEG 249
++ V+++VSWNS+I Y GD S+ F MQ G R Y SL++ +++ E
Sbjct: 164 GDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLT-EP 222
Query: 250 CLKIGKEIHCQVIKSGLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVG 309
+++ ++I C + KSGL D+ V + LV + K G + YA ++FN + RN V N ++
Sbjct: 223 DVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMV 282
Query: 310 GYVVNAHFLESFSCLRKMLEDDNLNPDC-ITIINLLP--SCTKLGALLEGKSIHGYAIRK 366
G V E+ M +++P+ + +++ P S + L +G+ +HG+ I
Sbjct: 283 GLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITT 342
Query: 367 GFLP-NVALETALIDMYAGSGALKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMEL 425
G + V + L++MYA G++ ++F M +K+ VSWN+MI +NG EA+E
Sbjct: 343 GLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVER 402
Query: 426 FQDLWSEPLKPDAMTFASILPAYAEIATLSDSMQIHSLITKLGLVSNIYISNSIVYMYAK 485
++ + + P + T S L + A + QIH KLG+ N+ +SN+++ +YA+
Sbjct: 403 YKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAE 462
Query: 486 CGDLQTAR---------DVVSWNVIIMAYAIHGLG-KISIQLFSEMREKGIKPNESTFVS 535
G L R D VSWN II A A ++ F + G K N TF S
Sbjct: 463 TGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSS 522
Query: 536 LLSSCSISGMVDEGWNYFDSMRKDYGIVPGIEHYGCIIDLLGRIGNLDQAKRFIEEMPSA 595
+LS+ S + G K+ I +I G+ G +D ++ M
Sbjct: 523 VLSAVSSLSFGELGKQIHGLALKN-NIADEATTENALIACYGKCGEMDGCEKIFSRMAER 581
Query: 596 PTARIWGALLTASRKNNDIVSAEFAARHVLSSAQD-NTGCYVLLSNMYAEAGRWEDVEQ- 653
W ++++ N + A +L + Q ++ Y + + +A E +
Sbjct: 582 RDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEV 641
Query: 654 ----IKAIMEKEGLKKTTGCSMFEKNGETH---RFIN 683
++A +E + + + M+ K G RF N
Sbjct: 642 HACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFN 678
Score = 185 bits (470), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 145/493 (29%), Positives = 230/493 (46%), Gaps = 30/493 (6%)
Query: 141 IKACAGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPVRDT 200
+++C G + H L+K+ L+ DVY+CN+LI Y++ G A ++FDEMP+R+
Sbjct: 10 VQSCVG--HRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNC 67
Query: 201 VSWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKI--GKEIH 258
VSW ++ GY G+ +LVF ++M G+ ++++ +S L A G + I G++IH
Sbjct: 68 VSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIH 127
Query: 259 CQVIKSGLEMDVMVQTSLVDMYGKC-GVVDYAERLFNMIFPRNIVAWNAMVGGYVVNAHF 317
+ K +D +V L+ MY KC G V YA F I +N V+WN+++ Y
Sbjct: 128 GLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQ 187
Query: 318 LESFSCLRKMLEDDNLNPDCITIINLLPSCTKLGA----LLEGKSIHGYAIRKGFLPNVA 373
+F M + D P T +L+ + L LLE I + G L ++
Sbjct: 188 RSAFRIFSSM-QYDGSRPTEYTFGSLVTTACSLTEPDVRLLE--QIMCTIQKSGLLTDLF 244
Query: 374 LETALIDMYAGSGALKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMELFQDLWSE- 432
+ + L+ +A SG+L K+F M +N V+ N ++ VR EA +LF D+ S
Sbjct: 245 VGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMI 304
Query: 433 PLKPDA-MTFASILPAY--AEIATLSDSMQIHSLITKLGLVS-NIYISNSIVYMYAKCGD 488
+ P++ + S P Y AE L ++H + GLV + I N +V MYAKCG
Sbjct: 305 DVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGS 364
Query: 489 LQTAR---------DVVSWNVIIMAYAIHGLGKISIQLFSEMREKGIKPNESTFVSLLSS 539
+ AR D VSWN +I +G +++ + MR I P T +S LSS
Sbjct: 365 IADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSS 424
Query: 540 CSISGMVDEGWNYFDSMRKDYGIVPGIEHYGCIIDLLGRIGNLDQAKRFIEEMPSAPTA- 598
C+ G K GI + ++ L G L++ ++ MP
Sbjct: 425 CASLKWAKLGQQIHGESLK-LGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVS 483
Query: 599 --RIWGALLTASR 609
I GAL + R
Sbjct: 484 WNSIIGALARSER 496
Score = 147 bits (371), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 108/360 (30%), Positives = 170/360 (47%), Gaps = 6/360 (1%)
Query: 68 NITKTRALQELVS-SGSMESACYLFEKMSYLDTYIWNVVIRGFVDNGL-FQEAVEFHHRM 125
N++ + AL L + +G + +F M D WN +I + EAV
Sbjct: 449 NVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNA 508
Query: 126 VCEGFKADYFTYPFVIKACAGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCV 185
G K + T+ V+ A + L + G+++HG K+ + + N+LI Y K G +
Sbjct: 509 QRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEM 568
Query: 186 ECAERMFDEMP-VRDTVSWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGA 244
+ E++F M RD V+WNSMI GY +L M G R D F + L A
Sbjct: 569 DGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSA 628
Query: 245 ISIEGCLKIGKEIHCQVIKSGLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAW 304
+ L+ G E+H +++ LE DV+V ++LVDMY KCG +DYA R FN + RN +W
Sbjct: 629 FASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSW 688
Query: 305 NAMVGGYVVNAHFLESFSCLRKMLEDDNLNPDCITIINLLPSCTKLGALLEG-KSIHGYA 363
N+M+ GY + E+ M D PD +T + +L +C+ G L EG K +
Sbjct: 689 NSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMS 748
Query: 364 IRKGFLPNVALETALIDMYAGSGALKMTEKLFGSM-IEKNLVSWNAMIAAYVR-NGQNRE 421
G P + + + D+ +G L E M ++ N++ W ++ A R NG+ E
Sbjct: 749 DSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAE 808
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 386 bits (991), Expect = e-106, Method: Compositional matrix adjust.
Identities = 236/663 (35%), Positives = 349/663 (52%), Gaps = 17/663 (2%)
Query: 153 GEKVHGSLFKSGLNSDV--YVCNSLIVMYMKLGCVECAERMFDEMPVRDTVSWNSMIGGY 210
G VH + K+ L+S ++ N LI MY KL E A + P R+ VSW S+I G
Sbjct: 25 GRVVHARIVKT-LDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGL 83
Query: 211 CSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKIGKEIHCQVIKSGLEMDV 270
G ++LV F EM+ G+ + F+ A A++ GK+IH +K G +DV
Sbjct: 84 AQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDV 143
Query: 271 MVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVVNAHFLESFSCLRKMLED 330
V S DMY K + D A +LF+ I RN+ WNA + V + E+ +
Sbjct: 144 FVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRI 203
Query: 331 DNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGFLPNVALETALIDMYAGSGALKM 390
D +P+ IT L +C+ L G +HG +R GF +V++ LID Y ++
Sbjct: 204 DG-HPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRS 262
Query: 391 TEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMELFQDLWSEPLKPDAMTFASILPAYAE 450
+E +F M KN VSW +++AAYV+N ++ +A L+ + ++ +S+L A A
Sbjct: 263 SEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAG 322
Query: 451 IATLSDSMQIHSLITKLGLVSNIYISNSIVYMYAKCG---------DLQTARDVVSWNVI 501
+A L IH+ K + I++ +++V MY KCG D +++V+ N +
Sbjct: 323 MAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSL 382
Query: 502 IMAYAIHGLGKISIQLFSEMREKGI--KPNESTFVSLLSSCSISGMVDEGWNYFDSMRKD 559
I YA G +++ LF EM +G PN TFVSLLS+CS +G V+ G FDSMR
Sbjct: 383 IGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRST 442
Query: 560 YGIVPGIEHYGCIIDLLGRIGNLDQAKRFIEEMPSAPTARIWGALLTASRKNNDIVSAEF 619
YGI PG EHY CI+D+LGR G +++A FI++MP PT +WGAL A R +
Sbjct: 443 YGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLL 502
Query: 620 AARHVLSSAQDNTGCYVLLSNMYAEAGRWEDVEQIKAIMEKEGLKKTTGCSMFEKNGETH 679
AA ++ ++G +VLLSN +A AGRW + ++ ++ G+KK G S + H
Sbjct: 503 AAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVH 562
Query: 680 RFINQDRSHSKTYLIYNVLDILLRKIGEDFYIHNVSKFSPAHL-MKNRAKSPHHHSVRLA 738
F +DRSH I L L ++ Y ++ K S L + +A HHS +LA
Sbjct: 563 AFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDL-KLSLYDLEEEEKAAEVSHHSEKLA 621
Query: 739 ISFGLISTSVGNPVLVRNNTRICEDCHSAVKKISEITKRELIVRDPKCFHHFRNGCCSCG 798
++FGL+S + P+ + N RIC DCHS K +S KRE+IVRD FH F++G CSC
Sbjct: 622 LAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCK 681
Query: 799 DYW 801
DYW
Sbjct: 682 DYW 684
Score = 143 bits (361), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 175/350 (50%), Gaps = 5/350 (1%)
Query: 85 ESACYLFEKMSYLDTYIWNVVIRGFVDNGLFQEAVEFHHRMVCEGFKADYFTYPFVIKAC 144
+ A LF+++ + WN I V +G +EA+E + T+ + AC
Sbjct: 160 DDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNAC 219
Query: 145 AGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPVRDTVSWN 204
+ L+L+ G ++HG + +SG ++DV VCN LI Y K + +E +F EM ++ VSW
Sbjct: 220 SDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWC 279
Query: 205 SMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKIGKEIHCQVIKS 264
S++ Y + + V + + + F + S L A + L++G+ IH +K+
Sbjct: 280 SLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKA 339
Query: 265 GLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVVNAHFLESFSCL 324
+E + V ++LVDMYGKCG ++ +E+ F+ + +N+V N+++GGY + +
Sbjct: 340 CVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALF 399
Query: 325 RKMLEDD-NLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRK--GFLPNVALETALIDM 381
+M P+ +T ++LL +C++ GA+ G I ++R G P + ++DM
Sbjct: 400 EEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFD-SMRSTYGIEPGAEHYSCIVDM 458
Query: 382 YAGSGALKMTEKLFGSM-IEKNLVSWNAMIAAYVRNGQNREAMELFQDLW 430
+G ++ + M I+ + W A+ A +G+ + + ++L+
Sbjct: 459 LGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLF 508
Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 116/228 (50%), Gaps = 4/228 (1%)
Query: 84 MESACYLFEKMSYLDTYIWNVVIRGFVDNGLFQEAVEFHHRMVCEGFKADYFTYPFVIKA 143
+ S+ +F +M + W ++ +V N ++A + R + + F V+ A
Sbjct: 260 IRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSA 319
Query: 144 CAGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPVRDTVSW 203
CAG+ L G +H K+ + ++V ++L+ MY K GC+E +E+ FDEMP ++ V+
Sbjct: 320 CAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTR 379
Query: 204 NSMIGGYCSVGDGVSSLVFFKEM--QNCGLRYDRFSLISALGAISIEGCLKIGKEIHCQV 261
NS+IGGY G +L F+EM + CG + + +S L A S G ++ G +I +
Sbjct: 380 NSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSM 439
Query: 262 IKS-GLEMDVMVQTSLVDMYGKCGVVDYA-ERLFNMIFPRNIVAWNAM 307
+ G+E + +VDM G+ G+V+ A E + M I W A+
Sbjct: 440 RSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGAL 487
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 385 bits (989), Expect = e-106, Method: Compositional matrix adjust.
Identities = 217/664 (32%), Positives = 356/664 (53%), Gaps = 24/664 (3%)
Query: 154 EKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPVRDTVSWNSMIGGYCSV 213
+++H SL L+ D ++ N L+ + + + +F + +NS+I G+ +
Sbjct: 30 KQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNN 89
Query: 214 GDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKIGKEIHCQVIKSGLEMDVMVQ 273
+L F ++ GL F+ L A + K+G ++H V+K G DV
Sbjct: 90 HLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAM 149
Query: 274 TSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVVNAHFLESFSCLRKMLEDDNL 333
TSL+ +Y G ++ A +LF+ I R++V W A+ GY + E+ +KM+E +
Sbjct: 150 TSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEM-GV 208
Query: 334 NPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGFLPNVALETALIDMYAGSGALKMTEK 393
PD I+ +L +C +G L G+ I Y N + T L+++YA G ++
Sbjct: 209 KPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARS 268
Query: 394 LFGSMIEKNLVSWNAMIAAYVRNGQNREAMELFQDLWSEPLKPDAMTFASILPAYAEIAT 453
+F SM+EK++V+W+ MI Y N +E +ELF + E LKPD + L + A +
Sbjct: 269 VFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGA 328
Query: 454 LSDSMQIHSLITKLGLVSNIYISNSIVYMYAKCGDL----QTARDVVSWNVIIMAYAIHG 509
L SLI + ++N++++N+++ MYAKCG + + +++ +++IM AI G
Sbjct: 329 LDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISG 388
Query: 510 LGK-----ISIQLFSEMREKGIKPNESTFVSLLSSCSISGMVDEGWNYFDSMRKDYGIVP 564
L K +S +F + + GI P+ STF+ LL C +G++ +G +F+++ Y +
Sbjct: 389 LAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKR 448
Query: 565 GIEHYGCIIDLLGRIGNLDQAKRFIEEMPSAPTARIWGALLTASRKNNDIVSAEFAARHV 624
+EHYGC++DL GR G LD A R I +MP P A +WGALL+ R D AE + +
Sbjct: 449 TVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKEL 508
Query: 625 LSSAQDNTGCYVLLSNMYAEAGRWEDVEQIKAIMEKEGLKKTTGCSMFEKNGETHRFINQ 684
++ N G YV LSN+Y+ GRW++ +++ +M K+G+KK G S E G+ H F+
Sbjct: 509 IALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLAD 568
Query: 685 DRSHSKTYLIYNVLDIL---LRKIG----EDFYIHNVSKFSPAHLMKNRAKSPHHHSVRL 737
D+SH + IY L+ L +R +G +F +V + + + + +HS +L
Sbjct: 569 DKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEE-------EEKERVLGYHSEKL 621
Query: 738 AISFGLISTSVGNPVLVRNNTRICEDCHSAVKKISEITKRELIVRDPKCFHHFRNGCCSC 797
A++ GLIST G + V N R+C DCH +K IS+IT+RE++VRD FH F NG CSC
Sbjct: 622 AVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSC 681
Query: 798 GDYW 801
DYW
Sbjct: 682 NDYW 685
Score = 204 bits (518), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 139/487 (28%), Positives = 235/487 (48%), Gaps = 12/487 (2%)
Query: 90 LFEKMSYLDTYIWNVVIRGFVDNGLFQEAVEFHHRMVCEGFKADYFTYPFVIKACAGLLY 149
LF + + +++N +I GFV+N LF E ++ + G FT+P V+KAC
Sbjct: 67 LFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASS 126
Query: 150 LSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPVRDTVSWNSMIGG 209
G +H + K G N DV SL+ +Y G + A ++FDE+P R V+W ++ G
Sbjct: 127 RKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSG 186
Query: 210 YCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKIGKEIHCQVIKSGLEMD 269
Y + G ++ FK+M G++ D + ++ L A G L G+ I + + ++ +
Sbjct: 187 YTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKN 246
Query: 270 VMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVVNAHFLESFSCLRKMLE 329
V+T+LV++Y KCG ++ A +F+ + ++IV W+ M+ GY N+ E +ML+
Sbjct: 247 SFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQ 306
Query: 330 DDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGFLPNVALETALIDMYAGSGALK 389
+NL PD +I+ L SC LGAL G+ R FL N+ + ALIDMYA GA+
Sbjct: 307 -ENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMA 365
Query: 390 MTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMELFQDLWSEPLKPDAMTFASILPAYA 449
++F M EK++V NA I+ +NG + + +F + PD TF +L
Sbjct: 366 RGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCV 425
Query: 450 EIATLSDSMQIHSLITKL-GLVSNIYISNSIVYMYAKCGDLQTARDVV-----SWNVIIM 503
+ D ++ + I+ + L + +V ++ + G L A ++ N I+
Sbjct: 426 HAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVW 485
Query: 504 AYAIHGLGKISIQLFSEMREK---GIKP-NESTFVSLLSSCSISGMVDEGWNYFDSM-RK 558
+ G + +E K ++P N +V L + S+ G DE D M +K
Sbjct: 486 GALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKK 545
Query: 559 DYGIVPG 565
+PG
Sbjct: 546 GMKKIPG 552
Score = 127 bits (318), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 94/396 (23%), Positives = 184/396 (46%), Gaps = 14/396 (3%)
Query: 81 SGSMESACYLFEKMSYLDTYIWNVVIRGFVDNGLFQEAVEFHHRMVCEGFKADYFTYPFV 140
SG + A LF+++ W + G+ +G +EA++ +MV G K D + V
Sbjct: 159 SGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQV 218
Query: 141 IKACAGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPVRDT 200
+ AC + L GE + + + + + +V +L+ +Y K G +E A +FD M +D
Sbjct: 219 LSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDI 278
Query: 201 VSWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKIGKEIHCQ 260
V+W++MI GY S + F +M L+ D+FS++ L + + G L +G+
Sbjct: 279 VTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISL 338
Query: 261 VIKSGLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVVNAHFLES 320
+ + ++ + +L+DMY KCG + +F + ++IV NA + G N H S
Sbjct: 339 IDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLS 398
Query: 321 FSCLRKMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIHG-----YAIRKGFLPNVALE 375
F+ + E ++PD T + LL C G + +G YA+++ V
Sbjct: 399 FAVFGQT-EKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKR----TVEHY 453
Query: 376 TALIDMYAGSGALKMTEKLFGSM-IEKNLVSWNAMIAAYVRNGQNREAMELFQDLWSEPL 434
++D++ +G L +L M + N + W A+++ + A + ++L + L
Sbjct: 454 GCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIA--L 511
Query: 435 KP-DAMTFASILPAYAEIATLSDSMQIHSLITKLGL 469
+P +A + + Y+ ++ ++ ++ K G+
Sbjct: 512 EPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGM 547
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 113/248 (45%), Gaps = 8/248 (3%)
Query: 68 NITKTRALQELVSSGSMESACYLFEKMSYLDTYIWNVVIRGFVDNGLFQEAVEFHHRMVC 127
+ +T + G ME A +F+ M D W+ +I+G+ N +E +E +M+
Sbjct: 247 SFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQ 306
Query: 128 EGFKADYFTYPFVIKACAGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVEC 187
E K D F+ + +CA L L GE + + +++++ N+LI MY K G +
Sbjct: 307 ENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMAR 366
Query: 188 AERMFDEMPVRDTVSWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISAL-GAIS 246
+F EM +D V N+ I G G S F + + G+ D + + L G +
Sbjct: 367 GFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVH 426
Query: 247 ---IEGCLKIGKEIHCQVIKSGLEMDVMVQTSLVDMYGKCGVVDYAERLF-NMIFPRNIV 302
I+ L+ I C L+ V +VD++G+ G++D A RL +M N +
Sbjct: 427 AGLIQDGLRFFNAISCVY---ALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAI 483
Query: 303 AWNAMVGG 310
W A++ G
Sbjct: 484 VWGALLSG 491
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 384 bits (987), Expect = e-105, Method: Compositional matrix adjust.
Identities = 215/639 (33%), Positives = 354/639 (55%), Gaps = 14/639 (2%)
Query: 79 VSSGSMESACYLFEKMSYLDTYIWNVVIRGFVDNGLFQEAVEFHHRMVCEGFKADYFTYP 138
+ G+++ A +F+ + T W +I G V G +++ ++++ + D +
Sbjct: 194 LKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILS 253
Query: 139 FVIKACAGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPVR 198
V+ AC+ L +L G+++H + + GL D + N LI Y+K G V A ++F+ MP +
Sbjct: 254 TVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNK 313
Query: 199 DTVSWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKIGKEIH 258
+ +SW +++ GY ++ F M GL+ D ++ S L + + L G ++H
Sbjct: 314 NIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVH 373
Query: 259 CQVIKSGLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYV---VNA 315
IK+ L D V SL+DMY KC + A ++F++ ++V +NAM+ GY
Sbjct: 374 AYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQW 433
Query: 316 HFLESFSCLRKMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGFLPNVALE 375
E+ + R M + P +T ++LL + L +L K IHG + G ++
Sbjct: 434 ELHEALNIFRDM-RFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAG 492
Query: 376 TALIDMYAGSGALKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMELFQDLWSEPLK 435
+ALID+Y+ LK + +F M K+LV WN+M A YV+ +N EA+ LF +L +
Sbjct: 493 SALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRER 552
Query: 436 PDAMTFASILPAYAEIATLSDSMQIHSLITKLGLVSNIYISNSIVYMYAKCG-------- 487
PD TFA+++ A +A++ + H + K GL N YI+N+++ MYAKCG
Sbjct: 553 PDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKA 612
Query: 488 -DLQTARDVVSWNVIIMAYAIHGLGKISIQLFSEMREKGIKPNESTFVSLLSSCSISGMV 546
D +RDVV WN +I +YA HG GK ++Q+ +M +GI+PN TFV +LS+CS +G+V
Sbjct: 613 FDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLV 672
Query: 547 DEGWNYFDSMRKDYGIVPGIEHYGCIIDLLGRIGNLDQAKRFIEEMPSAPTARIWGALLT 606
++G F+ M + +GI P EHY C++ LLGR G L++A+ IE+MP+ P A +W +LL+
Sbjct: 673 EDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLS 731
Query: 607 ASRKNNDIVSAEFAARHVLSSAQDNTGCYVLLSNMYAEAGRWEDVEQIKAIMEKEGLKKT 666
K ++ AE AA + S ++G + +LSN+YA G W + ++++ M+ EG+ K
Sbjct: 732 GCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKE 791
Query: 667 TGCSMFEKNGETHRFINQDRSHSKTYLIYNVLDILLRKI 705
G S N E H F+++D+SH K IY VLD LL +I
Sbjct: 792 PGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLLVQI 830
Score = 226 bits (576), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 157/547 (28%), Positives = 269/547 (49%), Gaps = 28/547 (5%)
Query: 81 SGSMESACYLFEKMSYLDTYIWNVVIRGFVDNGLFQEA-VEFHHRMVCEGFKADYFTYPF 139
+G M A +FEKM + W+ ++ +G+++E+ V F + +
Sbjct: 92 AGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSS 151
Query: 140 VIKACAGLLYLSEGE------KVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERMFD 193
I+AC+GL +G ++ L KSG + DVYV LI Y+K G ++ A +FD
Sbjct: 152 FIQACSGL----DGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFD 207
Query: 194 EMPVRDTVSWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKI 253
+P + TV+W +MI G +G SL F ++ + D + L + L A SI L+
Sbjct: 208 ALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEG 267
Query: 254 GKEIHCQVIKSGLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVV 313
GK+IH +++ GLEMD + L+D Y KCG V A +LFN + +NI++W ++ GY
Sbjct: 268 GKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQ 327
Query: 314 NAHFLESFSCLRKMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGFLPNVA 373
NA E+ M L PD ++L SC L AL G +H Y I+ +
Sbjct: 328 NALHKEAMELFTSM-SKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSY 386
Query: 374 LETALIDMYAGSGALKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQN---REAMELFQDLW 430
+ +LIDMYA L K+F ++V +NAMI Y R G EA+ +F+D+
Sbjct: 387 VTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMR 446
Query: 431 SEPLKPDAMTFASILPAYAEIATLSDSMQIHSLITKLGLVSNIYISNSIVYMYAKCGDLQ 490
++P +TF S+L A A + +L S QIH L+ K GL +I+ ++++ +Y+ C L+
Sbjct: 447 FRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLK 506
Query: 491 TAR---------DVVSWNVIIMAYAIHGLGKISIQLFSEMREKGIKPNESTFVSLLSSCS 541
+R D+V WN + Y + ++ LF E++ +P+E TF +++++
Sbjct: 507 DSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAG 566
Query: 542 ISGMVDEGWNYF-DSMRKDYGIVPGIEHYGCIIDLLGRIGNLDQAKRFIEEMPSAPTARI 600
V G + +++ P I + ++D+ + G+ + A + + S
Sbjct: 567 NLASVQLGQEFHCQLLKRGLECNPYITN--ALLDMYAKCGSPEDAHKAFDSAASRDVV-C 623
Query: 601 WGALLTA 607
W +++++
Sbjct: 624 WNSVISS 630
Score = 204 bits (519), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 135/407 (33%), Positives = 212/407 (52%), Gaps = 19/407 (4%)
Query: 156 VHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPVRDTVSWNSMIGGYCSVGD 215
VHG + GL D Y+ N LI +Y + G + A ++F++MP R+ VSW++M+ G
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 216 GVSSLVFFKEM----QNCGLRYDRFSLISALGAISIEGCLKIGKEIHCQVIKSGLEMDVM 271
SLV F E ++ Y S I A + G + ++ ++KSG + DV
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVF-QLQSFLVKSGFDRDVY 184
Query: 272 VQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVVNAHFLESFSCLRKMLEDD 331
V T L+D Y K G +DYA +F+ + ++ V W M+ G V S +++E D
Sbjct: 185 VGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLME-D 243
Query: 332 NLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGFLPNVALETALIDMYAGSGALKMT 391
N+ PD + +L +C+ L L GK IH + +R G + +L LID Y G +
Sbjct: 244 NVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAA 303
Query: 392 EKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMELFQDLWSEPLKPDAMTFASILPAYAEI 451
KLF M KN++SW +++ Y +N ++EAMELF + LKPD +SIL + A +
Sbjct: 304 HKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASL 363
Query: 452 ATLSDSMQIHSLITKLGLVSNIYISNSIVYMYAKCGDLQTAR---------DVVSWNVII 502
L Q+H+ K L ++ Y++NS++ MYAKC L AR DVV +N +I
Sbjct: 364 HALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMI 423
Query: 503 MAYAIHGLG---KISIQLFSEMREKGIKPNESTFVSLL-SSCSISGM 545
Y+ G ++ +F +MR + I+P+ TFVSLL +S S++ +
Sbjct: 424 EGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSL 470
Score = 161 bits (408), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/429 (24%), Positives = 202/429 (47%), Gaps = 15/429 (3%)
Query: 50 THIHKNQTITSKKSIGPRNITKTRALQELVSSGSMESACYLFEKMSYLDTYIWNVVIRGF 109
T +H T K ++G + + + A +F+ + D ++N +I G+
Sbjct: 370 TQVH---AYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGY 426
Query: 110 VDNGL---FQEAVEFHHRMVCEGFKADYFTYPFVIKACAGLLYLSEGEKVHGSLFKSGLN 166
G EA+ M + T+ +++A A L L +++HG +FK GLN
Sbjct: 427 SRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLN 486
Query: 167 SDVYVCNSLIVMYMKLGCVECAERMFDEMPVRDTVSWNSMIGGYCSVGDGVSSLVFFKEM 226
D++ ++LI +Y C++ + +FDEM V+D V WNSM GY + +L F E+
Sbjct: 487 LDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLEL 546
Query: 227 QNCGLRYDRFSLISALGAISIEGCLKIGKEIHCQVIKSGLEMDVMVQTSLVDMYGKCGVV 286
Q R D F+ + + A +++G+E HCQ++K GLE + + +L+DMY KCG
Sbjct: 547 QLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSP 606
Query: 287 DYAERLFNMIFPRNIVAWNAMVGGYVVNAHFLESFSCLRKMLEDDNLNPDCITIINLLPS 346
+ A + F+ R++V WN+++ Y + ++ L KM+ + + P+ IT + +L +
Sbjct: 607 EDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMM-SEGIEPNYITFVGVLSA 665
Query: 347 CTKLGALLEGKSIHGYAIRKGFLPNVALETALIDMYAGSGALKMTEKLFGSMIEK-NLVS 405
C+ G + +G +R G P ++ + +G L +L M K +
Sbjct: 666 CSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIV 725
Query: 406 WNAMIAAYVRNGQNREAMELFQDL--WSEPLKPDAMTFASILPA----YAEIATLSDSMQ 459
W ++++ + G N E E ++ S+P + T S + A + E + + M+
Sbjct: 726 WRSLLSGCAKAG-NVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMK 784
Query: 460 IHSLITKLG 468
+ ++ + G
Sbjct: 785 VEGVVKEPG 793
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 80/183 (43%), Gaps = 16/183 (8%)
Query: 441 FASILPAYAEIATLSDSMQIHSLITKLGLVSNIYISNSIVYMYAKCGDLQTARDV----- 495
FA +L A L +H I GL + Y+SN ++ +Y++ G + AR V
Sbjct: 47 FARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMP 106
Query: 496 ----VSWNVIIMAYAIHGLGKISIQLFSEM-REKGIKPNESTFVSLLSSCSISGMVDEG- 549
VSW+ ++ A HG+ + S+ +F E R + PNE S + +C SG+ G
Sbjct: 107 ERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQAC--SGLDGRGR 164
Query: 550 WNYF--DSMRKDYGIVPGIEHYGCIIDLLGRIGNLDQAKRFIEEMPSAPTARIWGALLTA 607
W F S G + +ID + GN+D A+ + +P T W +++
Sbjct: 165 WMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTV-TWTTMISG 223
Query: 608 SRK 610
K
Sbjct: 224 CVK 226
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 382 bits (981), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/527 (37%), Positives = 310/527 (58%), Gaps = 11/527 (2%)
Query: 286 VDYAERLFNMI-FPRNIVAWNAMVGGYVVNAHFLESFSCLRKMLEDDNLNPDCITIINLL 344
+ YA ++F+ I P N+ WN ++ GY + + +FS R+M + PD T L+
Sbjct: 69 MSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLI 128
Query: 345 PSCTKLGALLEGKSIHGYAIRKGFLPNVALETALIDMYAGSGALKMTEKLFGSMIEKNLV 404
+ T + + G++IH IR GF + ++ +L+ +YA G + K+F M EK+LV
Sbjct: 129 KAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLV 188
Query: 405 SWNAMIAAYVRNGQNREAMELFQDLWSEPLKPDAMTFASILPAYAEIATLSDSMQIHSLI 464
+WN++I + NG+ EA+ L+ ++ S+ +KPD T S+L A A+I L+ ++H +
Sbjct: 189 AWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYM 248
Query: 465 TKLGLVSNIYISNSIVYMYAKCGDLQTARDV---------VSWNVIIMAYAIHGLGKISI 515
K+GL N++ SN ++ +YA+CG ++ A+ + VSW +I+ A++G GK +I
Sbjct: 249 IKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAI 308
Query: 516 QLFSEMRE-KGIKPNESTFVSLLSSCSISGMVDEGWNYFDSMRKDYGIVPGIEHYGCIID 574
+LF M +G+ P E TFV +L +CS GMV EG+ YF MR++Y I P IEH+GC++D
Sbjct: 309 ELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVD 368
Query: 575 LLGRIGNLDQAKRFIEEMPSAPTARIWGALLTASRKNNDIVSAEFAARHVLSSAQDNTGC 634
LL R G + +A +I+ MP P IW LL A + D AEFA +L +++G
Sbjct: 369 LLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGD 428
Query: 635 YVLLSNMYAEAGRWEDVEQIKAIMEKEGLKKTTGCSMFEKNGETHRFINQDRSHSKTYLI 694
YVLLSNMYA RW DV++I+ M ++G+KK G S+ E H F+ D+SH ++ I
Sbjct: 429 YVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAI 488
Query: 695 YNVLDILLRKIGEDFYIHNVSKFSPAHLMKNRAKSPHHHSVRLAISFGLISTSVGNPVLV 754
Y L + ++ + Y+ +S + + + +HS ++AI+F LIST +P+ V
Sbjct: 489 YAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITV 548
Query: 755 RNNTRICEDCHSAVKKISEITKRELIVRDPKCFHHFRNGCCSCGDYW 801
N R+C DCH A+K +S++ RE++VRD FHHF+NG CSC DYW
Sbjct: 549 VKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 186 bits (471), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 115/368 (31%), Positives = 190/368 (51%), Gaps = 13/368 (3%)
Query: 75 LQELVSSGSMESACYLFEKMSY-LDTYIWNVVIRGFVDNGLFQEAVEFHHRMVCEGF-KA 132
L L S M A +F K+ ++ +IWN +IRG+ + G A + M G +
Sbjct: 60 LVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEP 119
Query: 133 DYFTYPFVIKACAGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERMF 192
D TYPF+IKA + + GE +H + +SG S +YV NSL+ +Y G V A ++F
Sbjct: 120 DTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVF 179
Query: 193 DEMPVRDTVSWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLK 252
D+MP +D V+WNS+I G+ G +L + EM + G++ D F+++S L A + G L
Sbjct: 180 DKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALT 239
Query: 253 IGKEIHCQVIKSGLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYV 312
+GK +H +IK GL ++ L+D+Y +CG V+ A+ LF+ + +N V+W +++ G
Sbjct: 240 LGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLA 299
Query: 313 VNAHFLESFSCLRKMLEDDNLNPDCITIINLLPSCTKLGALLEG-----KSIHGYAIRKG 367
VN E+ + M + L P IT + +L +C+ G + EG + Y I
Sbjct: 300 VNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIE-- 357
Query: 368 FLPNVALETALIDMYAGSGALKMTEKLFGSM-IEKNLVSWNAMIAAYVRNGQNREA-MEL 425
P + ++D+ A +G +K + SM ++ N+V W ++ A +G + A
Sbjct: 358 --PRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFAR 415
Query: 426 FQDLWSEP 433
Q L EP
Sbjct: 416 IQILQLEP 423
Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 143/270 (52%), Gaps = 6/270 (2%)
Query: 82 GSMESACYLFEKMSYLDTYIWNVVIRGFVDNGLFQEAVEFHHRMVCEGFKADYFTYPFVI 141
G + SA +F+KM D WN VI GF +NG +EA+ + M +G K D FT ++
Sbjct: 170 GDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLL 229
Query: 142 KACAGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPVRDTV 201
ACA + L+ G++VH + K GL +++ N L+ +Y + G VE A+ +FDEM +++V
Sbjct: 230 SACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSV 289
Query: 202 SWNSMIGGYCSVGDGVSSLVFFKEMQNC-GLRYDRFSLISALGAISIEGCLKIGKEIHCQ 260
SW S+I G G G ++ FK M++ GL + + L A S G +K G E + +
Sbjct: 290 SWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFE-YFR 348
Query: 261 VIKSGLEMDVMVQ--TSLVDMYGKCGVVDYA-ERLFNMIFPRNIVAWNAMVGGYVVNAHF 317
++ +++ ++ +VD+ + G V A E + +M N+V W ++G V+
Sbjct: 349 RMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDS 408
Query: 318 -LESFSCLRKMLEDDNLNPDCITIINLLPS 346
L F+ ++ + + N + D + + N+ S
Sbjct: 409 DLAEFARIQILQLEPNHSGDYVLLSNMYAS 438
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 379 bits (974), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/623 (34%), Positives = 340/623 (54%), Gaps = 15/623 (2%)
Query: 190 RMFDEMPVRDTVSWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEG 249
R F P + I CS G +L+ EM G + L A +
Sbjct: 10 RSFSSSPTNYVLQTILPISQLCSNGRLQEALL---EMAMLGPEMGFHGYDALLNACLDKR 66
Query: 250 CLKIGKEIHCQVIKSGLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVG 309
L+ G+ +H +IK+ ++T L+ YGKC ++ A ++ + + +N+V+W AM+
Sbjct: 67 ALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMIS 126
Query: 310 GYVVNAHFLESFSCLRKMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGFL 369
Y H E+ + +M+ D P+ T +L SC + L GK IHG ++ +
Sbjct: 127 RYSQTGHSSEALTVFAEMMRSDG-KPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYD 185
Query: 370 PNVALETALIDMYAGSGALKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMELFQDL 429
++ + ++L+DMYA +G +K ++F + E+++VS A+IA Y + G + EA+E+F L
Sbjct: 186 SHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRL 245
Query: 430 WSEPLKPDAMTFASILPAYAEIATLSDSMQIHSLITKLGLVSNIYISNSIVYMYAKCGDL 489
SE + P+ +T+AS+L A + +A L Q H + + L + NS++ MY+KCG+L
Sbjct: 246 HSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNL 305
Query: 490 QTARDV---------VSWNVIIMAYAIHGLGKISIQLFSEMR-EKGIKPNESTFVSLLSS 539
AR + +SWN +++ Y+ HGLG+ ++LF MR EK +KP+ T +++LS
Sbjct: 306 SYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSG 365
Query: 540 CSISGMVDEGWNYFDSM-RKDYGIVPGIEHYGCIIDLLGRIGNLDQAKRFIEEMPSAPTA 598
CS M D G N FD M +YG PG EHYGCI+D+LGR G +D+A FI+ MPS PTA
Sbjct: 366 CSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTA 425
Query: 599 RIWGALLTASRKNNDIVSAEFAARHVLSSAQDNTGCYVLLSNMYAEAGRWEDVEQIKAIM 658
+ G+LL A R + + E R ++ +N G YV+LSN+YA AGRW DV ++A+M
Sbjct: 426 GVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMM 485
Query: 659 EKEGLKKTTGCSMFEKNGETHRFINQDRSHSKTYLIYNVLDILLRKIGEDFYIHNVSKFS 718
++ + K G S + H F DR+H + + + + K+ + Y+ ++S
Sbjct: 486 MQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDLSCVL 545
Query: 719 PAHLMKNRAKSPHHHSVRLAISFGLISTSVGNPVLVRNNTRICEDCHSAVKKISEITKRE 778
+ + K HS +LA++FGLI+T G P+ V N RIC DCH+ K S++ +RE
Sbjct: 546 YDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIFSKVFERE 605
Query: 779 LIVRDPKCFHHFRNGCCSCGDYW 801
+ +RD FH +G CSCGDYW
Sbjct: 606 VSLRDKNRFHQIVDGICSCGDYW 628
Score = 184 bits (467), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 106/344 (30%), Positives = 177/344 (51%), Gaps = 11/344 (3%)
Query: 106 IRGFVDNGLFQEAVEFHHRMVCEGFKADYFTYPFVIKACAGLLYLSEGEKVHGSLFKSGL 165
I NG QEA+ M G + + Y ++ AC L +G++VH + K+
Sbjct: 27 ISQLCSNGRLQEALL---EMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRY 83
Query: 166 NSDVYVCNSLIVMYMKLGCVECAERMFDEMPVRDTVSWNSMIGGYCSVGDGVSSLVFFKE 225
Y+ L++ Y K C+E A ++ DEMP ++ VSW +MI Y G +L F E
Sbjct: 84 LPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAE 143
Query: 226 MQNCGLRYDRFSLISALGAISIEGCLKIGKEIHCQVIKSGLEMDVMVQTSLVDMYGKCGV 285
M + + F+ + L + L +GK+IH ++K + + V +SL+DMY K G
Sbjct: 144 MMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQ 203
Query: 286 VDYAERLFNMIFPRNIVAWNAMVGGYV---VNAHFLESFSCLRKMLEDDNLNPDCITIIN 342
+ A +F + R++V+ A++ GY ++ LE F L + ++P+ +T +
Sbjct: 204 IKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMF----HRLHSEGMSPNYVTYAS 259
Query: 343 LLPSCTKLGALLEGKSIHGYAIRKGFLPNVALETALIDMYAGSGALKMTEKLFGSMIEKN 402
LL + + L L GK H + +R+ L+ +LIDMY+ G L +LF +M E+
Sbjct: 260 LLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERT 319
Query: 403 LVSWNAMIAAYVRNGQNREAMELFQDLWSEP-LKPDAMTFASIL 445
+SWNAM+ Y ++G RE +ELF+ + E +KPDA+T ++L
Sbjct: 320 AISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVL 363
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/403 (27%), Positives = 181/403 (44%), Gaps = 37/403 (9%)
Query: 45 RSSKSTHIHKNQTITSKKSIGPRNITKTRALQELVSSGSMESACYLFEKMSYLDTYIWNV 104
R + H H +T P +TR L +E A + ++M + W
Sbjct: 69 RDGQRVHAHMIKT-----RYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTA 123
Query: 105 VIRGFVDNGLFQEAVEFHHRMVCEGFKADYFTYPFVIKACAGLLYLSEGEKVHGSLFKSG 164
+I + G EA+ M+ K + FT+ V+ +C L G+++HG + K
Sbjct: 124 MISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWN 183
Query: 165 LNSDVYVCNSLIVMYMKLGCVECAERMFDEMPVRDTVSWNSMIGGYCSVGDGVSSLVFFK 224
+S ++V +SL+ MY K G ++ A +F+ +P RD VS ++I GY +G +L F
Sbjct: 184 YDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFH 243
Query: 225 EMQNCGLRYDRFSLISALGAISIEGCLKIGKEIHCQVIKSGLEMDVMVQTSLVDMYGKCG 284
+ + G+ + + S L A+S L GK+ HC V++ L ++Q SL+DMY KCG
Sbjct: 244 RLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCG 303
Query: 285 VVDYAERLFNMIFPRNIVAWNAMVGGYVVNAHFLESFSCLRKMLEDDNLNPDCITIINLL 344
+ YA RLF+ + R ++WNAM+ GY + E R M ++ + PD +T++ +L
Sbjct: 304 NLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVL 363
Query: 345 PSCTKLGALLEGKSIHGYAIRKGFLPNVALETALIDMYAGSGALKMTEKLFGSMIEKNLV 404
C+ HG G M AG K + +G +++
Sbjct: 364 SGCS-----------HGRMEDTGL-------NIFDGMVAGEYGTKPGTEHYGCIVD---- 401
Query: 405 SWNAMIAAYVRNGQNREAMELFQDLWSEPLKPDAMTFASILPA 447
M+ R G+ EA E + + P KP A S+L A
Sbjct: 402 ----MLG---RAGRIDEAFEFIKRM---PSKPTAGVLGSLLGA 434
>sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protein At1g09410
OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2
Length = 705
Score = 374 bits (959), Expect = e-102, Method: Compositional matrix adjust.
Identities = 216/662 (32%), Positives = 358/662 (54%), Gaps = 46/662 (6%)
Query: 160 LFKSGLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPVRDTVSWNSMIGGYCSVGD-GVS 218
LF + ++ N L+ YMK G ++ A ++FD MP R+ VSW +++ GY G V+
Sbjct: 70 LFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVA 129
Query: 219 SLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKIGK-EIHCQVIKSGLEMDVMVQTSLV 277
+F+K + + + + + G L+ G+ + C++ + + D + +TS++
Sbjct: 130 ESLFWKMPEKNKVSW----------TVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMI 179
Query: 278 DMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVVNAHFLESFSCLRKMLEDDNLNPDC 337
K G VD A +F+ + R+++ W MV GY N ++ M E
Sbjct: 180 HGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTE----- 234
Query: 338 ITIINLLPSCTKLGALLEGKSIHGYAIRKGFLPNVALETALIDMYAGSGALKMTEKLFGS 397
++ ++L + G + + + + K P +A A+I G + ++F S
Sbjct: 235 VSWTSMLMGYVQNGRIEDAEELFEVMPVK---PVIAC-NAMISGLGQKGEIAKARRVFDS 290
Query: 398 MIEKNLVSWNAMIAAYVRNGQNREAMELFQDLWSEPLKPDAMTFASILPAYAEIATLSDS 457
M E+N SW +I + RNG EA++LF + + ++P T SIL A +A+L
Sbjct: 291 MKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHG 350
Query: 458 MQIHSLITKLGLVSNIYISNSIVYMYAKCGDLQTAR---------DVVSWNVIIMAYAIH 508
Q+H+ + + ++Y+++ ++ MY KCG+L ++ D++ WN II YA H
Sbjct: 351 KQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASH 410
Query: 509 GLGKISIQLFSEMREKG-IKPNESTFVSLLSSCSISGMVDEGWNYFDSMRKDYGIVPGIE 567
GLG+ ++++F EM G KPNE TFV+ LS+CS +GMV+EG ++SM +G+ P
Sbjct: 411 GLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITA 470
Query: 568 HYGCIIDLLGRIGNLDQAKRFIEEMPSAPTARIWGALLTASRKNNDIVSAEFAARHVLSS 627
HY C++D+LGR G ++A I+ M P A +WG+LL A R ++ + AEF A+ ++
Sbjct: 471 HYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEI 530
Query: 628 AQDNTGCYVLLSNMYAEAGRWEDVEQIKAIMEKEGLKKTTGCSMFEKNGETHRF----IN 683
+N+G Y+LLSNMYA GRW DV +++ +M+ ++K+ GCS E + H F IN
Sbjct: 531 EPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGIN 590
Query: 684 QDRSHSKTYLIYNVLDILLRKIGED----FYIHNVSKFSPAHLMKNRAKSPHHHSVRLAI 739
I + LD LLR+ G + + +H+V + + + S +HS RLA+
Sbjct: 591 SHPEQESILKILDELDGLLREAGYNPDCSYALHDVDE-------EEKVNSLKYHSERLAV 643
Query: 740 SFGLISTSVGNPVLVRNNTRICEDCHSAVKKISEITKRELIVRDPKCFHHFRNGCCSCGD 799
++ L+ S G P+ V N R+C DCH+A+K IS++ +RE+I+RD FHHFRNG CSC D
Sbjct: 644 AYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHHFRNGECSCKD 703
Query: 800 YW 801
YW
Sbjct: 704 YW 705
Score = 107 bits (268), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 103/475 (21%), Positives = 208/475 (43%), Gaps = 35/475 (7%)
Query: 79 VSSGSMESACYLFEKMSYLDTYIWNVVIRGFVDNGLFQEAVEFHHRMVCEGFKADYFTYP 138
+ +G ++ A +F+ M + W +++G+V NG A +M + + ++
Sbjct: 90 MKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMP----EKNKVSWT 145
Query: 139 FVIKACAGLLYLSEGEKVHG-SLFKSGLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPV 197
++ + +L +G L++ + D S+I K G V+ A +FDEM
Sbjct: 146 VML-----IGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSE 200
Query: 198 RDTVSWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKIGKEI 257
R ++W +M+ GY + F M S S L G ++ +E+
Sbjct: 201 RSVITWTTMVTGYGQNNRVDDARKIFDVMPE----KTEVSWTSMLMGYVQNGRIEDAEEL 256
Query: 258 -HCQVIKSGLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVVNAH 316
+K V+ +++ G+ G + A R+F+ + RN +W ++ + N
Sbjct: 257 FEVMPVKP-----VIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGF 311
Query: 317 FLESFSCLRKMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGFLPNVALET 376
LE+ L +++ + P T+I++L C L +L GK +H +R F +V + +
Sbjct: 312 ELEALD-LFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVAS 370
Query: 377 ALIDMYAGSGALKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMELFQDL-WSEPLK 435
L+ MY G L ++ +F K+++ WN++I+ Y +G EA+++F ++ S K
Sbjct: 371 VLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTK 430
Query: 436 PDAMTFASILPAYAEIATLSDSMQIHSLITKLGLVSNIYISNS-IVYMYAKCGDLQTARD 494
P+ +TF + L A + + + ++I+ + + V I + +V M + G A +
Sbjct: 431 PNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAME 490
Query: 495 VVS----------WNVIIMAYAIHGLGKISIQLFSEMREKGIKPNESTFVSLLSS 539
++ W ++ A H ++ + F + I+P S LLS+
Sbjct: 491 MIDSMTVEPDAAVWGSLLGACRTH--SQLDVAEFCAKKLIEIEPENSGTYILLSN 543
Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 127/256 (49%), Gaps = 5/256 (1%)
Query: 78 LVSSGSMESACYLFEKMSYLDTYIWNVVIRGFVDNGLFQEAVEFHHRMVCEGFKADYFTY 137
L G + A +F+ M + W VI+ NG EA++ M +G + + T
Sbjct: 275 LGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTL 334
Query: 138 PFVIKACAGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPV 197
++ CA L L G++VH L + + DVYV + L+ MY+K G + ++ +FD P
Sbjct: 335 ISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPS 394
Query: 198 RDTVSWNSMIGGYCSVGDGVSSLVFFKEMQNCG-LRYDRFSLISALGAISIEGCLKIGKE 256
+D + WNS+I GY S G G +L F EM G + + + ++ L A S G ++ G +
Sbjct: 395 KDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLK 454
Query: 257 IHCQVIKS--GLEMDVMVQTSLVDMYGKCGVVDYA-ERLFNMIFPRNIVAWNAMVGGYVV 313
I+ + ++S G++ +VDM G+ G + A E + +M + W +++G
Sbjct: 455 IY-ESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRT 513
Query: 314 NAHFLESFSCLRKMLE 329
++ + C +K++E
Sbjct: 514 HSQLDVAEFCAKKLIE 529
Score = 100 bits (248), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 90/403 (22%), Positives = 171/403 (42%), Gaps = 57/403 (14%)
Query: 67 RNITKTRAL-QELVSSGSMESACYLFEKMSYLDTYIWNVVIRGFVDNGLFQEAVEFHHRM 125
RN+ AL + V +G ++ A LF KM + W V++ GF+ +G +A + + +
Sbjct: 108 RNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMI 167
Query: 126 --------------VCEGFKADYFTYPF-------VIKACAGLLYLSEGEKVHGS--LFK 162
+C+ + D F VI + + +V + +F
Sbjct: 168 PDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFD 227
Query: 163 SGLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPVRDTVSWNSMIGGYCSVGD------- 215
S+++ Y++ G +E AE +F+ MPV+ ++ N+MI G G+
Sbjct: 228 VMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRV 287
Query: 216 ------------------------GVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCL 251
+ +L F MQ G+R +LIS L + L
Sbjct: 288 FDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASL 347
Query: 252 KIGKEIHCQVIKSGLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGY 311
GK++H Q+++ ++DV V + L+ MY KCG + ++ +F+ ++I+ WN+++ GY
Sbjct: 348 HHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGY 407
Query: 312 VVNAHFLESFSCLRKMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIH-GYAIRKGFLP 370
+ E+ +M + P+ +T + L +C+ G + EG I+ G P
Sbjct: 408 ASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKP 467
Query: 371 NVALETALIDMYAGSGALKMTEKLFGSM-IEKNLVSWNAMIAA 412
A ++DM +G ++ SM +E + W +++ A
Sbjct: 468 ITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGA 510
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040, mitochondrial
OS=Arabidopsis thaliana GN=PCMP-E88 PE=2 SV=1
Length = 1028
Score = 373 bits (957), Expect = e-102, Method: Compositional matrix adjust.
Identities = 211/637 (33%), Positives = 341/637 (53%), Gaps = 14/637 (2%)
Query: 84 MESACYLFEKMSYLDTYIWNVVIRGFVDNGLFQEAVEFHHRMVCEGFKADYFTYPFVIKA 143
ME+A +FE + + WN +IRG+ NG + +E M G+ D FT+ ++
Sbjct: 378 MEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLST 437
Query: 144 CAGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPVRDTVSW 203
CA L G + H + K L +++V N+L+ MY K G +E A ++F+ M RD V+W
Sbjct: 438 CAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTW 497
Query: 204 NSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKIGKEIHCQVIK 263
N++IG Y + + FK M CG+ D L S L A + L GK++HC +K
Sbjct: 498 NTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVK 557
Query: 264 SGLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVVNAHFLESFSC 323
GL+ D+ +SL+DMY KCG++ A ++F+ + ++V+ NA++ GY N LE
Sbjct: 558 CGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNN--LEEAVV 615
Query: 324 LRKMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGFLPNVA-LETALIDMY 382
L + + +NP IT ++ +C K +L G HG ++GF L +L+ MY
Sbjct: 616 LFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMY 675
Query: 383 AGSGALKMTEKLFGSMIE-KNLVSWNAMIAAYVRNGQNREAMELFQDLWSEPLKPDAMTF 441
S + LF + K++V W M++ + +NG EA++ ++++ + + PD TF
Sbjct: 676 MNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATF 735
Query: 442 ASILPAYAEIATLSDSMQIHSLITKLGLVSNIYISNSIVYMYAKCGDLQTAR-------- 493
++L + +++L + IHSLI L + SN+++ MYAKCGD++ +
Sbjct: 736 VTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRR 795
Query: 494 --DVVSWNVIIMAYAIHGLGKISIQLFSEMREKGIKPNESTFVSLLSSCSISGMVDEGWN 551
+VVSWN +I YA +G + ++++F MR+ I P+E TF+ +L++CS +G V +G
Sbjct: 796 RSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRK 855
Query: 552 YFDSMRKDYGIVPGIEHYGCIIDLLGRIGNLDQAKRFIEEMPSAPTARIWGALLTASRKN 611
F+ M YGI ++H C++DLLGR G L +A FIE P AR+W +LL A R +
Sbjct: 856 IFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIH 915
Query: 612 NDIVSAEFAARHVLSSAQDNTGCYVLLSNMYAEAGRWEDVEQIKAIMEKEGLKKTTGCSM 671
D + E +A ++ N+ YVLLSN+YA G WE ++ +M G+KK G S
Sbjct: 916 GDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSW 975
Query: 672 FEKNGETHRFINQDRSHSKTYLIYNVLDILLRKIGED 708
+ TH F D+SHS+ I L+ L + +D
Sbjct: 976 IDVEQRTHIFAAGDKSHSEIGKIEMFLEDLYDLMKDD 1012
Score = 254 bits (648), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 163/566 (28%), Positives = 286/566 (50%), Gaps = 32/566 (5%)
Query: 66 PRNITKTRALQELVSSGSMESACYLFEKMSYLDTYIWNVVIRGFVDNGLFQEAVEFHHRM 125
P ++ + + G ++ A LF +MS D WNV+I G G A+E+ M
Sbjct: 259 PDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNM 318
Query: 126 VCEGFKADYFTYPFVIKACAGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCV 185
K+ T V+ A + L G VH K GL S++YV +SL+ MY K +
Sbjct: 319 RKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKM 378
Query: 186 ECAERMFDEMPVRDTVSWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAI 245
E A ++F+ + ++ V WN+MI GY G+ + F +M++ G D F+ S L
Sbjct: 379 EAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTC 438
Query: 246 SIEGCLKIGKEIHCQVIKSGLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWN 305
+ L++G + H +IK L ++ V +LVDMY KCG ++ A ++F + R+ V WN
Sbjct: 439 AASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWN 498
Query: 306 AMVGGYVVNAHFLESFSCLRKMLEDDNL---NPDCITIINLLPSCTKLGALLEGKSIHGY 362
++G YV + + E+F ++M NL D + + L +CT + L +GK +H
Sbjct: 499 TIIGSYVQDENESEAFDLFKRM----NLCGIVSDGACLASTLKACTHVHGLYQGKQVHCL 554
Query: 363 AIRKGFLPNVALETALIDMYAGSGALKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREA 422
+++ G ++ ++LIDMY+ G +K K+F S+ E ++VS NA+IA Y +N EA
Sbjct: 555 SVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEA 613
Query: 423 MELFQDLWSEPLKPDAMTFASILPAYAEIATLSDSMQIHSLITKLGLVSN-IYISNSIVY 481
+ LFQ++ + + P +TFA+I+ A + +L+ Q H ITK G S Y+ S++
Sbjct: 614 VVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLG 673
Query: 482 MY----------AKCGDLQTARDVVSWNVIIMAYAIHGLGKISIQLFSEMREKGIKPNES 531
MY A +L + + +V W ++ ++ +G + +++ + EMR G+ P+++
Sbjct: 674 MYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQA 733
Query: 532 TFVSLLSSCSISGMVDEGWNYFDSMRKDYGIVPGIEH------YGCIIDLLGRIGNLDQA 585
TFV++L CS+ + EG R + ++ + H +ID+ + G++ +
Sbjct: 734 TFVTVLRVCSVLSSLREG-------RAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGS 786
Query: 586 KRFIEEMPSAPTARIWGALLTASRKN 611
+ +EM W +L+ KN
Sbjct: 787 SQVFDEMRRRSNVVSWNSLINGYAKN 812
Score = 222 bits (565), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 156/535 (29%), Positives = 253/535 (47%), Gaps = 54/535 (10%)
Query: 90 LFEKMSYLDTYIWNVVIRGFVDNGLFQEAVEFHHRMVCEGFKADYFTYPFVIKACAGLLY 149
+FE + +T W + G+V GL +EAV RM EG + D+ + VI
Sbjct: 217 VFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINT------ 270
Query: 150 LSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPVRDTVSWNSMIGG 209
Y++LG ++ A +F EM D V+WN MI G
Sbjct: 271 -----------------------------YIRLGKLKDARLLFGEMSSPDVVAWNVMISG 301
Query: 210 YCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKIGKEIHCQVIKSGLEMD 269
+ G ++ +F M+ ++ R +L S L AI I L +G +H + IK GL +
Sbjct: 302 HGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASN 361
Query: 270 VMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVVNAHFLESFSCLRKMLE 329
+ V +SLV MY KC ++ A ++F + +N V WNAM+ GY AH ES + ++
Sbjct: 362 IYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGY---AHNGESHKVMELFMD 418
Query: 330 --DDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGFLPNVALETALIDMYAGSGA 387
N D T +LL +C L G H I+K N+ + AL+DMYA GA
Sbjct: 419 MKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGA 478
Query: 388 LKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMELFQDLWSEPLKPDAMTFASILPA 447
L+ ++F M +++ V+WN +I +YV++ EA +LF+ + + D AS L A
Sbjct: 479 LEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKA 538
Query: 448 YAEIATLSDSMQIHSLITKLGLVSNIYISNSIVYMYAKCGDLQTARDVVS----WNVIIM 503
+ L Q+H L K GL +++ +S++ MY+KCG ++ AR V S W+V+ M
Sbjct: 539 CTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSM 598
Query: 504 AYAIHGLGKISIQ----LFSEMREKGIKPNESTFVSLLSSCSISGMVDEGWNYFDSMRKD 559
I G + +++ LF EM +G+ P+E TF +++ +C + G + + K
Sbjct: 599 NALIAGYSQNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITK- 657
Query: 560 YGIVPGIEHYGCIIDLLGRIGN---LDQAKRFIEEMPSAPTARIWGALLTASRKN 611
G E+ G I LLG N + +A E+ S + +W +++ +N
Sbjct: 658 RGFSSEGEYLG--ISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQN 710
Score = 197 bits (502), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 157/557 (28%), Positives = 265/557 (47%), Gaps = 28/557 (5%)
Query: 29 FKIPETNPTPSFETNARSSKSTHIHKNQTITSKKSIGPRNITKTRALQELVSS-GSMESA 87
+ I + T T A S + +I KK + +N+ AL ++ + G++E A
Sbjct: 424 YNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLA-KNLFVGNALVDMYAKCGALEDA 482
Query: 88 CYLFEKMSYLDTYIWNVVIRGFVDNGLFQEAVEFHHRMVCEGFKADYFTYPFVIKACAGL 147
+FE+M D WN +I +V + EA + RM G +D +KAC +
Sbjct: 483 RQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHV 542
Query: 148 LYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPVRDTVSWNSMI 207
L +G++VH K GL+ D++ +SLI MY K G ++ A ++F +P VS N++I
Sbjct: 543 HGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALI 602
Query: 208 GGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKIGKEIHCQVIKSGLE 267
GY S + ++V F+EM G+ + + + A L +G + H Q+ K G
Sbjct: 603 AGY-SQNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFS 661
Query: 268 MD-VMVQTSLVDMYGKCGVVDYAERLFNMI-FPRNIVAWNAMVGGYVVNAHFLESFSCLR 325
+ + SL+ MY + A LF+ + P++IV W M+ G+ N + E+ +
Sbjct: 662 SEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYK 721
Query: 326 KMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGFLPNVALETALIDMYAGS 385
+M D L PD T + +L C+ L +L EG++IH + LIDMYA
Sbjct: 722 EMRHDGVL-PDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKC 780
Query: 386 GALKMTEKLFGSMIEK-NLVSWNAMIAAYVRNGQNREAMELFQDLWSEPLKPDAMTFASI 444
G +K + ++F M + N+VSWN++I Y +NG +A+++F + + PD +TF +
Sbjct: 781 GDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGV 840
Query: 445 LPAYAEIATLSDSMQIHS-LITKLGLVSNIYISNSIVYMYAKCGDLQTARDVVS------ 497
L A + +SD +I +I + G+ + + +V + + G LQ A D +
Sbjct: 841 LTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKP 900
Query: 498 ----WNVIIMAYAIHG---LGKISIQLFSEMREKGIKPNESTFVSLLSSCSISGMVDEGW 550
W+ ++ A IHG G+IS + E+ +P S+ LLS+ S E
Sbjct: 901 DARLWSSLLGACRIHGDDIRGEISAEKLIEL-----EPQNSSAYVLLSNIYASQGCWEKA 955
Query: 551 NYFDSMRKDYGI--VPG 565
N + +D G+ VPG
Sbjct: 956 NALRKVMRDRGVKKVPG 972
Score = 187 bits (476), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 127/454 (27%), Positives = 214/454 (47%), Gaps = 47/454 (10%)
Query: 148 LYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPVRDTVSWNSMI 207
L L G+ VH G++S+ + N+++ +Y K V AE+ FD + +D +WNSM+
Sbjct: 74 LALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSML 132
Query: 208 GGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKIGKEIHCQVIKSGLE 267
Y S+G L F + + ++F+ L + E ++ G++IHC +IK GLE
Sbjct: 133 SMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLE 192
Query: 268 MDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVVNAHFLESFSCLRKM 327
+ +LVDMY KC + A R+F I N V W + GY V A E + +
Sbjct: 193 RNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGY-VKAGLPEEAVLVFER 251
Query: 328 LEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGFLPNVALETALIDMYAGSGA 387
+ D+ PD + + ++ + +LG L + +
Sbjct: 252 MRDEGHRPDHLAFVTVINTYIRLGKLKDAR------------------------------ 281
Query: 388 LKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMELFQDLWSEPLKPDAMTFASILPA 447
LFG M ++V+WN MI+ + + G A+E F ++ +K T S+L A
Sbjct: 282 -----LLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSA 336
Query: 448 YAEIATLSDSMQIHSLITKLGLVSNIYISNSIVYMYAKCGDLQTARDV---------VSW 498
+A L + +H+ KLGL SNIY+ +S+V MY+KC ++ A V V W
Sbjct: 337 IGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFW 396
Query: 499 NVIIMAYAIHGLGKISIQLFSEMREKGIKPNESTFVSLLSSCSISGMVDEGWNYFDSMRK 558
N +I YA +G ++LF +M+ G ++ TF SLLS+C+ S ++ G + F S+
Sbjct: 397 NAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMG-SQFHSIII 455
Query: 559 DYGIVPGIEHYGCIIDLLGRIGNLDQAKRFIEEM 592
+ + ++D+ + G L+ A++ E M
Sbjct: 456 KKKLAKNLFVGNALVDMYAKCGALEDARQIFERM 489
Score = 173 bits (439), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 129/491 (26%), Positives = 221/491 (45%), Gaps = 55/491 (11%)
Query: 135 FTYPFVIKACAGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERMFDE 194
FT+ V+ CA + G ++H S+ K GL + Y +L+ MY K + A R+F+
Sbjct: 161 FTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEW 220
Query: 195 MPVRDTVSWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKIG 254
+ +TV W + GY G +++ F+ M++ G R D + +
Sbjct: 221 IVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFV--------------- 265
Query: 255 KEIHCQVIKSGLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGY--- 311
++++ Y + G + A LF + ++VAWN M+ G+
Sbjct: 266 --------------------TVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKR 305
Query: 312 VVNAHFLESFSCLRKMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGFLPN 371
+E F +RK ++ T+ ++L + + L G +H AI+ G N
Sbjct: 306 GCETVAIEYFFNMRK----SSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASN 361
Query: 372 VALETALIDMYAGSGALKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMELFQDLWS 431
+ + ++L+ MY+ ++ K+F ++ EKN V WNAMI Y NG++ + MELF D+ S
Sbjct: 362 IYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKS 421
Query: 432 EPLKPDAMTFASILPAYAEIATLSDSMQIHSLITKLGLVSNIYISNSIVYMYAKCGDLQT 491
D TF S+L A L Q HS+I K L N+++ N++V MYAKCG L+
Sbjct: 422 SGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALED 481
Query: 492 A---------RDVVSWNVIIMAYAIHGLGKISIQLFSEMREKGIKPNESTFVSLLSSCS- 541
A RD V+WN II +Y + LF M GI + + S L +C+
Sbjct: 482 ARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTH 541
Query: 542 ISGMVDEGWNYFDSMRKDYGIVPGIEHYGCIIDLLGRIGNLDQAKRFIEEMPSAPTARIW 601
+ G+ + S++ G+ + +ID+ + G + A++ +P +
Sbjct: 542 VHGLYQGKQVHCLSVK--CGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSM- 598
Query: 602 GALLTASRKNN 612
AL+ +NN
Sbjct: 599 NALIAGYSQNN 609
>sp|P0C8Q2|PP323_ARATH Pentatricopeptide repeat-containing protein At4g19191,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E1 PE=2
SV=1
Length = 654
Score = 370 bits (950), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/612 (33%), Positives = 329/612 (53%), Gaps = 13/612 (2%)
Query: 102 WNVVIRGFVDNGLFQEAVEFHHRMVCEGFKADYFTYPFVIKACAGLLYLSEGEKVHGSLF 161
WN+ IR V+ E++ M GF+ + FT+PFV KACA L + E VH L
Sbjct: 20 WNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLI 79
Query: 162 KSGLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPVRDTVSWNSMIGGYCSVGDGVSSLV 221
KS SDV+V + + M++K V+ A ++F+ MP RD +WN+M+ G+C G +
Sbjct: 80 KSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFS 139
Query: 222 FFKEMQNCGLRYDRFSLISALGAISIEGCLKIGKEIHCQVIKSGLEMDVMVQTSLVDMYG 281
F+EM+ + D ++++ + + S E LK+ + +H I+ G+++ V V + + YG
Sbjct: 140 LFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYG 199
Query: 282 KCGVVDYAERLFNMI--FPRNIVAWNAMVGGYVVNAHFLESFSCLRKMLEDDNLNPDCIT 339
KCG +D A+ +F I R +V+WN+M Y V ++F ML ++ PD T
Sbjct: 200 KCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREE-FKPDLST 258
Query: 340 IINLLPSCTKLGALLEGKSIHGYAIRKGFLPNVALETALIDMYAGSGALKMTEKLFGSMI 399
INL SC L +G+ IH +AI G ++ I MY+ S LF M
Sbjct: 259 FINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMT 318
Query: 400 EKNLVSWNAMIAAYVRNGQNREAMELFQDLWSEPLKPDAMTFASILPAYAEIATLSDSMQ 459
+ VSW MI+ Y G EA+ LF + KPD +T S++ + +L
Sbjct: 319 SRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKW 378
Query: 460 IHSLITKLGLV-SNIYISNSIVYMYAKCGDLQTARD---------VVSWNVIIMAYAIHG 509
I + G N+ I N+++ MY+KCG + ARD VV+W +I YA++G
Sbjct: 379 IDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNG 438
Query: 510 LGKISIQLFSEMREKGIKPNESTFVSLLSSCSISGMVDEGWNYFDSMRKDYGIVPGIEHY 569
+ +++LFS+M + KPN TF+++L +C+ SG +++GW YF M++ Y I PG++HY
Sbjct: 439 IFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHY 498
Query: 570 GCIIDLLGRIGNLDQAKRFIEEMPSAPTARIWGALLTASRKNNDIVSAEFAARHVLSSAQ 629
C++DLLGR G L++A I M + P A IWGALL A + + ++ AE AA + +
Sbjct: 499 SCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEP 558
Query: 630 DNTGCYVLLSNMYAEAGRWEDVEQIKAIMEKEGLKKTTGCSMFEKNGETHRFINQDRSHS 689
YV ++N+YA AG W+ +I++IM++ +KK G S+ + NG+ H F + H
Sbjct: 559 QMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGHV 618
Query: 690 KTYLIYNVLDIL 701
+ +IY L+ L
Sbjct: 619 ENEVIYFTLNGL 630
Score = 179 bits (454), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 125/431 (29%), Positives = 209/431 (48%), Gaps = 21/431 (4%)
Query: 202 SWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFS---LISALGAISIEGCLKIGKEIH 258
+WN I + D V SL+ F+EM+ G + F+ + A ++ GC ++ +H
Sbjct: 19 AWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEM---VH 75
Query: 259 CQVIKSGLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVVNAHFL 318
+IKS DV V T+ VDM+ KC VDYA ++F + R+ WNAM+ G+ + H
Sbjct: 76 AHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTD 135
Query: 319 ESFSCLRKMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGFLPNVALETAL 378
++FS R+M ++ + PD +T++ L+ S + +L +++H IR G V +
Sbjct: 136 KAFSLFREMRLNE-ITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTW 194
Query: 379 IDMYAGSGALKMTEKLFGSMI--EKNLVSWNAMIAAYVRNGQNREAMELFQDLWSEPLKP 436
I Y G L + +F ++ ++ +VSWN+M AY G+ +A L+ + E KP
Sbjct: 195 ISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKP 254
Query: 437 DAMTFASILPAYAEIATLSDSMQIHSLITKLGLVSNIYISNSIVYMYAK----CG----- 487
D TF ++ + TL+ IHS LG +I N+ + MY+K C
Sbjct: 255 DLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLF 314
Query: 488 DLQTARDVVSWNVIIMAYAIHGLGKISIQLFSEMREKGIKPNESTFVSLLSSCSISGMVD 547
D+ T+R VSW V+I YA G ++ LF M + G KP+ T +SL+S C G ++
Sbjct: 315 DIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLE 374
Query: 548 EGWNYFDSMRKDYGIV-PGIEHYGCIIDLLGRIGNLDQAKRFIEEMPSAPTARIWGALLT 606
G + D+ YG + +ID+ + G++ +A+ + P T W ++
Sbjct: 375 TG-KWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPE-KTVVTWTTMIA 432
Query: 607 ASRKNNDIVSA 617
N + A
Sbjct: 433 GYALNGIFLEA 443
Score = 164 bits (414), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 128/501 (25%), Positives = 224/501 (44%), Gaps = 22/501 (4%)
Query: 72 TRALQELVSSGSMESACYLFEKMSYLDTYIWNVVIRGFVDNGLFQEAVEFHHRMVCEGFK 131
T + V S++ A +FE+M D WN ++ GF +G +A M
Sbjct: 91 TATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEIT 150
Query: 132 ADYFTYPFVIKACAGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERM 191
D T +I++ + L E +H + G++ V V N+ I Y K G ++ A+ +
Sbjct: 151 PDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLV 210
Query: 192 FDEMPV--RDTVSWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEG 249
F+ + R VSWNSM Y G+ + + M + D + I+ +
Sbjct: 211 FEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPE 270
Query: 250 CLKIGKEIHCQVIKSGLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVG 309
L G+ IH I G + D+ + + MY K A LF+++ R V+W M+
Sbjct: 271 TLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMIS 330
Query: 310 GYVVNAHFLESFSCLRKMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGF- 368
GY E+ + M++ PD +T+++L+ C K G+L GK I A G
Sbjct: 331 GYAEKGDMDEALALFHAMIKSGE-KPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCK 389
Query: 369 LPNVALETALIDMYAGSGALKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMELFQD 428
NV + ALIDMY+ G++ +F + EK +V+W MIA Y NG EA++LF
Sbjct: 390 RDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSK 449
Query: 429 LWSEPLKPDAMTFASILPAYAEIATLSDSMQIHSLITKLGLVS-NIYISNSIVYMYAKCG 487
+ KP+ +TF ++L A A +L + ++ ++ +S + + +V + + G
Sbjct: 450 MIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKG 509
Query: 488 DLQTARDVVS----------WNVIIMAYAIHGLGKISIQLFSEMREKGIKPN-ESTFVSL 536
L+ A +++ W ++ A IH KI+ Q + ++P + +V +
Sbjct: 510 KLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLF--NLEPQMAAPYVEM 567
Query: 537 LSSCSISGMVDEGWNYFDSMR 557
+ + +GM W+ F +R
Sbjct: 568 ANIYAAAGM----WDGFARIR 584
Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 104/249 (41%), Gaps = 35/249 (14%)
Query: 405 SWNAMIAAYVRNGQNREAMELFQDLWSEPLKPDAMTFASILPAYAEIATLSDSMQIHSLI 464
+WN I V E++ LF+++ +P+ TF + A A +A + +H+ +
Sbjct: 19 AWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHL 78
Query: 465 TKLGLVSNIYISNSIVYMYAKCGDLQTA---------RDVVSWNVIIMAYAIHGLGKISI 515
K S++++ + V M+ KC + A RD +WN ++ + G +
Sbjct: 79 IKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAF 138
Query: 516 QLFSEMREKGIKPNESTFVSLLSSCSISGMVDEGWNYFDSMRKDYGIVPGIEHYGCI--- 572
LF EMR I P+ T ++L+ S S ++ ++M GI G++ +
Sbjct: 139 SLFREMRLNEITPDSVTVMTLIQSASF----EKSLKLLEAMHA-VGIRLGVDVQVTVANT 193
Query: 573 -IDLLGRIGNLDQAKRFIEEMPSAPTARIWGALLTASRKNNDIVS--AEFAARHVLSSAQ 629
I G+ G+LD AK E + R + +VS + F A V A
Sbjct: 194 WISTYGKCGDLDSAKLVFEAI---------------DRGDRTVVSWNSMFKAYSVFGEAF 238
Query: 630 DNTGCYVLL 638
D G Y L+
Sbjct: 239 DAFGLYCLM 247
>sp|Q9SS97|PP205_ARATH Putative pentatricopeptide repeat-containing protein At3g01580
OS=Arabidopsis thaliana GN=PCMP-E87 PE=3 SV=2
Length = 660
Score = 370 bits (949), Expect = e-101, Method: Compositional matrix adjust.
Identities = 209/633 (33%), Positives = 341/633 (53%), Gaps = 14/633 (2%)
Query: 90 LFEKMSYLDTYIWNVVIRGFVDNGLFQEAVEFHHRMVCEGFKADYFTYPFVIKACAGLLY 149
+F +M+ Y WN +++ ++E + M + K D FT P +KAC L
Sbjct: 16 MFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELRE 75
Query: 150 LSEGEKVHGSLFKS-GLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPVRDTVSWNSMIG 208
++ GE +HG + K L SD+YV +SLI MY+K G + A RMFDE+ D V+W+SM+
Sbjct: 76 VNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVS 135
Query: 209 GYCSVGDGVSSLVFFKEM-QNCGLRYDRFSLISALGAISIEGCLKIGKEIHCQVIKSGLE 267
G+ G ++ FF+ M + DR +LI+ + A + ++G+ +H VI+ G
Sbjct: 136 GFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFS 195
Query: 268 MDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVVNAHFLESFSCLRKM 327
D+ + SL++ Y K A LF MI +++++W+ ++ YV N E+ M
Sbjct: 196 NDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDM 255
Query: 328 LEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGFLPNVALETALIDMYAGSGA 387
+ DD P+ T++ +L +C L +G+ H AIRKG V + TAL+DMY +
Sbjct: 256 M-DDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFS 314
Query: 388 LKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMELFQDLWSEP-LKPDAMTFASILP 446
+ +F + K++VSW A+I+ + NG ++E F + E +PDA+ +L
Sbjct: 315 PEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLG 374
Query: 447 AYAEIATLSDSMQIHSLITKLGLVSNIYISNSIVYMYAKCGDLQTA---------RDVVS 497
+ +E+ L + HS + K G SN +I S+V +Y++CG L A +D V
Sbjct: 375 SCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVV 434
Query: 498 WNVIIMAYAIHGLGKISIQLFSEM-REKGIKPNESTFVSLLSSCSISGMVDEGWNYFDSM 556
W +I Y IHG G +++ F+ M + +KPNE TF+S+LS+CS +G++ EG F M
Sbjct: 435 WTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLM 494
Query: 557 RKDYGIVPGIEHYGCIIDLLGRIGNLDQAKRFIEEMPSAPTARIWGALLTASRKNNDIVS 616
DY + P +EHY ++DLLGR+G+LD A + MP +PT +I G LL A R + +
Sbjct: 495 VNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEM 554
Query: 617 AEFAARHVLSSAQDNTGCYVLLSNMYAEAGRWEDVEQIKAIMEKEGLKKTTGCSMFEKNG 676
AE A+ + ++ G Y+L+SN+Y G WE+VE+++ +++ G+KK S+ E
Sbjct: 555 AETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRR 614
Query: 677 ETHRFINQDRSHSKTYLIYNVLDILLRKIGEDF 709
+ HRF+ D H + +Y +L L + ED
Sbjct: 615 KVHRFVADDELHPEKEPVYGLLKELDLHMKEDL 647
Score = 209 bits (533), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 142/504 (28%), Positives = 254/504 (50%), Gaps = 21/504 (4%)
Query: 79 VSSGSMESACYLFEKMSYLDTYIWNVVIRGFVDNGLFQEAVEFHHRMV-CEGFKADYFTY 137
+ G M A +F+++ D W+ ++ GF NG +AVEF RMV D T
Sbjct: 107 IKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTL 166
Query: 138 PFVIKACAGLLYLSEGEKVHGSLFKSGLNSDVYVCNSLIVMYMKLGCVECAERMFDEMPV 197
++ AC L G VHG + + G ++D+ + NSL+ Y K + A +F +
Sbjct: 167 ITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAE 226
Query: 198 RDTVSWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISIEGCLKIGKEI 257
+D +SW+++I Y G +L+ F +M + G + +++ L A + L+ G++
Sbjct: 227 KDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKT 286
Query: 258 HCQVIKSGLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNAMVGGYVVNAHF 317
H I+ GLE +V V T+LVDMY KC + A +F+ I +++V+W A++ G+ +N
Sbjct: 287 HELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMA 346
Query: 318 LESFSCLRKMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRKGFLPNVALETA 377
S ML ++N PD I ++ +L SC++LG L + K H Y I+ GF N + +
Sbjct: 347 HRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGAS 406
Query: 378 LIDMYAGSGALKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMELFQDLW-SEPLKP 436
L+++Y+ G+L K+F + K+ V W ++I Y +G+ +A+E F + S +KP
Sbjct: 407 LVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKP 466
Query: 437 DAMTFASILPAYAEIATLSDSMQIHSL-ITKLGLVSNIYISNSIVYMYAKCGDLQTARDV 495
+ +TF SIL A + + + ++I L + L N+ +V + + GDL TA ++
Sbjct: 467 NEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEI 526
Query: 496 VS----------WNVIIMAYAIHGLGKISIQLFSEMREKGIKPNESTFVSLLSSCSISGM 545
++ A IH G+++ + ++ E ++ N + + L+S ++ G+
Sbjct: 527 TKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFE--LESNHAGYYMLMS--NVYGV 582
Query: 546 VDEGWNYFDSMR---KDYGIVPGI 566
E W + +R K GI G+
Sbjct: 583 KGE-WENVEKLRNSVKQRGIKKGL 605
Score = 201 bits (512), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 133/431 (30%), Positives = 216/431 (50%), Gaps = 13/431 (3%)
Query: 188 AERMFDEMPVRDTVSWNSMIGGYCSVGDGVSSLVFFKEMQNCGLRYDRFSLISALGAISI 247
A +MF EM R WN+++ L F M + D F+L AL A
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 248 EGCLKIGKEIHCQVIKS-GLEMDVMVQTSLVDMYGKCGVVDYAERLFNMIFPRNIVAWNA 306
+ G+ IH V K L D+ V +SL+ MY KCG + A R+F+ + +IV W++
Sbjct: 73 LREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSS 132
Query: 307 MVGGYVVNAHFLESFSCLRKMLEDDNLNPDCITIINLLPSCTKLGALLEGKSIHGYAIRK 366
MV G+ N ++ R+M+ ++ PD +T+I L+ +CTKL G+ +HG+ IR+
Sbjct: 133 MVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRR 192
Query: 367 GFLPNVALETALIDMYAGSGALKMTEKLFGSMIEKNLVSWNAMIAAYVRNGQNREAMELF 426
GF +++L +L++ YA S A K LF + EK+++SW+ +IA YV+NG EA+ +F
Sbjct: 193 GFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVF 252
Query: 427 QDLWSEPLKPDAMTFASILPAYAEIATLSDSMQIHSLITKLGLVSNIYISNSIVYMYAKC 486
D+ + +P+ T +L A A L + H L + GL + + +S ++V MY KC
Sbjct: 253 NDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKC 312
Query: 487 GDLQTA---------RDVVSWNVIIMAYAIHGLGKISIQLFSEM-REKGIKPNESTFVSL 536
+ A +DVVSW +I + ++G+ SI+ FS M E +P+ V +
Sbjct: 313 FSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKV 372
Query: 537 LSSCSISGMVDEGWNYFDSMRKDYGIVPGIEHYGCIIDLLGRIGNLDQAKRFIEEMPSAP 596
L SCS G +++ F S YG +++L R G+L A + +
Sbjct: 373 LGSCSELGFLEQA-KCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKD 431
Query: 597 TARIWGALLTA 607
T +W +L+T
Sbjct: 432 TV-VWTSLITG 441
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 290,956,304
Number of Sequences: 539616
Number of extensions: 12123605
Number of successful extensions: 39085
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 393
Number of HSP's successfully gapped in prelim test: 63
Number of HSP's that attempted gapping in prelim test: 28452
Number of HSP's gapped (non-prelim): 2542
length of query: 801
length of database: 191,569,459
effective HSP length: 126
effective length of query: 675
effective length of database: 123,577,843
effective search space: 83415044025
effective search space used: 83415044025
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)