Query 003711
Match_columns 801
No_of_seqs 676 out of 2883
Neff 9.8
Searched_HMMs 29240
Date Tue Mar 26 18:15:25 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/003711.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1760-1763//hhsearch_pdb/003711hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4etp_A Kinesin-like protein KA 1.0 1 1 640.9 39.3 386 392-785 12-402 (403)
2 3u06_A Protein claret segregat 1.0 1 1 632.8 31.7 376 397-792 17-394 (412)
3 3t0q_A AGR253WP; kinesin, alph 1.0 1 1 608.5 32.3 344 435-784 1-348 (349)
4 4h1g_A Maltose binding protein 1.0 1 1 607.3 32.1 344 424-782 359-713 (715)
5 2rep_A Kinesin-like protein KI 1.0 1 1 604.3 30.6 344 427-780 10-376 (376)
6 3cob_A Kinesin heavy chain-lik 1.0 1 1 603.4 30.3 335 435-789 1-336 (369)
7 2y65_A Kinesin, kinesin heavy 1.0 1 1 599.5 25.4 333 436-788 8-341 (365)
8 3b6u_A Kinesin-like protein KI 1.0 1 1 597.8 24.9 339 433-789 15-362 (372)
9 3lre_A Kinesin-like protein KI 1.0 1 1 595.5 25.9 333 432-780 3-355 (355)
10 1goj_A Kinesin, kinesin heavy 1.0 1 1 594.5 27.8 334 437-789 4-339 (355)
No 1
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=1.00 E-value=1 Score=640.93 Aligned_cols=386 Identities=44% Similarity=0.701 Sum_probs=326.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCEEECCCCCC-
Q ss_conf 8769989999999999999999999998998799774210010002574248864179999989999973277179865-
Q 003711 392 ALETKTEFEGQKKLINELRNHLEDAEYKLIEGEKLRKRLHNTILELKGNIRVFCRVRPLLPDDSSGSEGKLISYPTTTE- 470 (801)
Q Consensus 392 ~~~~~~~~~~~~~~l~~l~~~l~~l~~~~~~~e~~~~~l~~~l~~l~~~i~v~~r~~~~~~~e~~~~~~~~i~~~~~~~- 470 (801)
+..+..+..++...+.+++.++.++..++.+.+..++.|++++.+++++|+|||||||..+.+...... .+.+.....
T Consensus 12 ~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~rr~l~n~~~elkgnIrV~vRvRP~~~~~e~~~~~-~~~v~~~~~~ 90 (403)
T 4etp_A 12 IAALKEKIAALKEKIKDTELGMKELNEILIKEETVRRTLHNELQELRGNIRVYLRIRPALKNLENSDTS-LINVNEFDDN 90 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSEEEEEEECCCCTTTSCSCCT-TEEECCCBTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCC-EEEEEECCCC
T ss_conf 999999999999999999999999999999999999999989997189869999908899763446787-0687403677
Q ss_pred CCCCCEEEE---CCCCEEEEEECEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCC
Q ss_conf 556412440---18941578712250999883567998999999964687447985325776552030138999998776
Q 003711 471 ALGRGIDIM---QNGQKHSFSFDRVFMPDESQEDVFVEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGKPGHPDLKGL 547 (801)
Q Consensus 471 ~~~~~~~~~---~~~~~~~~~fd~vf~~~~~q~~v~~~~~~lv~~~~~G~~~~i~~~G~t~sGKt~tl~G~~~~~~~~Gi 547 (801)
.....+.+. .....+.|.||+||+++++|.+||..+.|+|+++++|||+||||||+|||||||||+|+. .||
T Consensus 91 ~~~~~~~~~~~~~~~~~~~F~FD~VF~~~~~Q~~Vf~~v~~lv~~~l~G~N~tifAYGqTGSGKTyTM~g~~-----~Gi 165 (403)
T 4etp_A 91 SGVQSMEVTKIQNTAQVHEFKFDKIFDQQDTNVDVFKEVGQLVQSSLDGYNVAIFAYGQTGSGKTFTMLNPG-----DGI 165 (403)
T ss_dssp TTBEEEEEEECSSSCEEEEEEESEEECTTCCHHHHHHHHHHHHHHHHTTCCEEEEEESCTTSSHHHHHHCTT-----TSH
T ss_pred CCCEEEEEECCCCCCCCEEEECCEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEECCCC-----CCC
T ss_conf 884379982678876756877688979988658999999999999858961699997779999836747999-----863
Q ss_pred HHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCEECCCCCCCCCHHHHHCCCCCCEEEEECC-CCCEEECCCEEEEEC
Q ss_conf 2799999999998510049723699999999846100135998430122100489731787589-998698134799917
Q 003711 548 IPRSLEQIFQTRQSLLSQGWKYEMQVSMLEIYNETIRDLLSTNRDASRLENACNGKQYAIKHDA-SGNTHVTDLTVVDVC 626 (801)
Q Consensus 548 i~~~~~~lf~~~~~~~~~~~~~~v~~S~~ei~~e~v~DLL~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~ 626 (801)
|||++.+||..+......++.|.|.+||+|||||+|+|||.+...... ....+..+.+++++ .+++++.|++++.|.
T Consensus 166 ipr~~~~lF~~i~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~--~~~~~~~~~i~~~~~~~~~~v~~l~~~~v~ 243 (403)
T 4etp_A 166 IPSTISHIFNWINKLKTKGWDYKVNAEFIEIYNENIVDLLRSDNNNKE--DTSIGLKHEIRHDQETKTTTITNVTSVKLE 243 (403)
T ss_dssp HHHHHHHHHHHHHHHHTTTEEEEEEEEEEEEETTEEEETTCC----------CCSCCCCEEEETTTTEEEETTCCCEECC
T ss_pred CHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCEEEECCCCCCCCCC--CCCCCCCEEEEEECCCCCEEECCCEEEEEC
T ss_conf 214799999888764036834899999999836614685677665544--456676503687079997883681799919
Q ss_pred CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 96799999999841186566778878888543999999620378874599889999647996655788864030677999
Q 003711 627 STKEVSYLLDRAAHSRSVGKTQMNEQSSRSHFVFTLRISGLNESTEQQVQGILNLIDLAGSERLSKSGSTGDRLKETQAI 706 (801)
Q Consensus 627 s~~e~~~~l~~~~~~r~~~~~~~~~~ssrsh~i~~i~i~~~~~~~~~~~~~~l~~vDLag~e~~~~~~~~~~~~~e~~~i 706 (801)
+.+++..++..|..+|.+++|.+|..|||||+||+|+|.+.+........|+|+|||||||||..+++..|.+++|+..|
T Consensus 244 s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~~kL~lVDLAGSEr~~~t~~~g~rl~E~~~I 323 (403)
T 4etp_A 244 SEEMVEIILKKANKLRSTASTASNEHSSRSHSIFIIHLSGSNAKTGAHSYGTLNLVDLAGSERINVSQVVGDRLRETQNI 323 (403)
T ss_dssp CHHHHHHHHHHHC--C----CHHHHHHHTSEEEEEEEEEEEETTTCCEEEEEEEEEECCCCCCCCCSSCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 99999999999997344344547765677642799999986068897668999999799986444567704889999998
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 9989889999999860467999865577622224345458985179999639998778987999999988400403898
Q 003711 707 NKSLSSLSDVIFALAKKEKKEDHVPFRNSKLTYLLQPCLGGDSKTLMFVNISPEASSVGESLCSLRFAARVNACEIGTP 785 (801)
Q Consensus 707 n~sl~~L~~vi~~l~~~~~~~~~~p~r~s~LT~lL~~~l~g~~~~~~i~~isp~~~~~~etl~tL~fa~r~~~~~~~~~ 785 (801)
|+||++|++||.+|+.+..+..||||||||||+||+|+|||||+|+||+||||+..+++||++||+||+|++.|++++-
T Consensus 324 NkSL~aLg~vI~aL~~~~~~~~hiPyRdSkLT~LLqdsLgGnskt~mi~~vsP~~~~~~ETl~TL~fA~rv~~~~~~~r 402 (403)
T 4etp_A 324 NKSLSALGDVIHALGQPDSTKRHIPFRNSKLTYLLQYSLTGDSKTLMFVNISPSSSHINETLNSLRFASKVNSTRLVSR 402 (403)
T ss_dssp HHHHHHHHHHHHHHTSSCTTTSCCCGGGSHHHHHTGGGTSTTCEEEEEEEECCSGGGHHHHHHHHHHHHHHCCC-----
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 7889999999999861468998677456668898798628996499999937963348999999999999710526789
No 2
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A*
Probab=1.00 E-value=1 Score=632.78 Aligned_cols=376 Identities=42% Similarity=0.675 Sum_probs=319.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCE
Q ss_conf 89999999999999999999998998799774210010002574248864179999989999973277179865556412
Q 003711 397 TEFEGQKKLINELRNHLEDAEYKLIEGEKLRKRLHNTILELKGNIRVFCRVRPLLPDDSSGSEGKLISYPTTTEALGRGI 476 (801)
Q Consensus 397 ~~~~~~~~~l~~l~~~l~~l~~~~~~~e~~~~~l~~~l~~l~~~i~v~~r~~~~~~~e~~~~~~~~i~~~~~~~~~~~~~ 476 (801)
....++...+..+..++..+..++.+.+..++.|++.+.+++++|+|||||||+.+.|...... .+.+++...+.-...
T Consensus 17 ~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~rr~l~n~~~~l~gnIrV~vRvRP~~~~E~~~~~~-~~~~~~~~~v~~~~~ 95 (412)
T 3u06_A 17 QRTEELLRCNEQQAAELETCKEQLFQSNMERKELHNTVMDLRDNIRVFCRIRPPLESEENRMCC-TWTYHDESTVELQSI 95 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSEEEEEEECCCCGGGTTSCBC-EEEEEETTEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHCCCCCE-EEEECCCCEEEEECC
T ss_conf 9999999999999999999999999999999998878887179979999848998100267612-899369987998057
Q ss_pred EE--ECCCCEEEEEECEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHHHHH
Q ss_conf 44--0189415787122509998835679989999999646874479853257765520301389999987762799999
Q 003711 477 DI--MQNGQKHSFSFDRVFMPDESQEDVFVEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGKPGHPDLKGLIPRSLEQ 554 (801)
Q Consensus 477 ~~--~~~~~~~~~~fd~vf~~~~~q~~v~~~~~~lv~~~~~G~~~~i~~~G~t~sGKt~tl~G~~~~~~~~Gii~~~~~~ 554 (801)
.. ......+.|.||+||+++++|.+||+.+.|+|+++++|||+||||||+|||||||||+|.+..+ |||||++++
T Consensus 96 ~~~~~~~~~~~~F~FD~VF~~~~~Q~~Vf~~v~plv~~~l~G~n~tifAYGqTGSGKTyTM~G~~~~~---Giipr~~~~ 172 (412)
T 3u06_A 96 DAQAKSKMGQQIFSFDQVFHPLSSQSDIFEMVSPLIQSALDGYNICIFAYGQTGSGKTYTMDGVPESV---GVIPRTVDL 172 (412)
T ss_dssp C-------CCCEEECSEEECTTCCHHHHHTTTHHHHHHHHTTCCEEEEEESSTTSSHHHHHTEETTEE---CHHHHHHHH
T ss_pred CCCCCCCCCCEEEEECEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEECCCCCCC---CCHHHHHHH
T ss_conf 85445666863776086818999788999999999999977974479974589999716736778878---667899999
Q ss_pred HHHHHHHHHHCCCEEEEEEEEEEEECCCEECCCCCCCCCHHHHHCCCCCCEEEEECCCCCEEECCCEEEEECCHHHHHHH
Q ss_conf 99999851004972369999999984610013599843012210048973178758999869813479991796799999
Q 003711 555 IFQTRQSLLSQGWKYEMQVSMLEIYNETIRDLLSTNRDASRLENACNGKQYAIKHDASGNTHVTDLTVVDVCSTKEVSYL 634 (801)
Q Consensus 555 lf~~~~~~~~~~~~~~v~~S~~ei~~e~v~DLL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~s~~e~~~~ 634 (801)
||..+......++.|.|.+||+|||+|.|+|||.+... ...+.+.+++.+++++.|++++.|.+++++..+
T Consensus 173 lF~~i~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~---------~~~i~~~~~~~~~~~v~gl~~~~v~s~~e~~~l 243 (412)
T 3u06_A 173 LFDSIRGYRNLGWEYEIKATFLEIYNEVLYDLLSNEQK---------DMEIRMAKNNKNDIYVSNITEETVLDPNHLRHL 243 (412)
T ss_dssp HHHHHHHHGGGTEEEEEEEEEEEEETTEEEETTCCSCC---------CCCEEECSSCTTSEEETTCCCEECCSHHHHHHH
T ss_pred HHHHHHHHCCCCCEEEEEEEEEEEECCEEEECCCCCCC---------CCEEEEEECCCCCEEECCEEEEEECCHHHHHHH
T ss_conf 99865342036834887778999967745786788788---------863553035899889736079994999999999
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 99984118656677887888854399999962037887459988999964799665578886403067799999898899
Q 003711 635 LDRAAHSRSVGKTQMNEQSSRSHFVFTLRISGLNESTEQQVQGILNLIDLAGSERLSKSGSTGDRLKETQAINKSLSSLS 714 (801)
Q Consensus 635 l~~~~~~r~~~~~~~~~~ssrsh~i~~i~i~~~~~~~~~~~~~~l~~vDLag~e~~~~~~~~~~~~~e~~~in~sl~~L~ 714 (801)
+..|..+|.+++|.+|..|||||+||+|+|.+.+........|+|+||||||||+.. .+.+++|+.+||+||++|+
T Consensus 244 l~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~~kL~lVDLAGSEr~~----~~~rl~E~~~INkSL~aLg 319 (412)
T 3u06_A 244 MHTAKMNRATASTAGNERSSRSHAVTKLELIGRHAEKQEISVGSINLVDLAGSESPK----TSTRMTETKNINRSLSELT 319 (412)
T ss_dssp HHHHHHHCC-----CHHHHTTCEEEEEEEEEEEETTTTEEEEEEEEEEECCCCCC--------------CTTTHHHHHHH
T ss_pred HHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEEEEEEECCCCCCCC----CCCHHHHHHHHHHHHHHHH
T ss_conf 999974354234679887767329999999997078897888999999899777677----6630476887758899999
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 999998604679998655776222243454589851799996399987789879999999884004038986556556
Q 003711 715 DVIFALAKKEKKEDHVPFRNSKLTYLLQPCLGGDSKTLMFVNISPEASSVGESLCSLRFAARVNACEIGTPRRQTSMR 792 (801)
Q Consensus 715 ~vi~~l~~~~~~~~~~p~r~s~LT~lL~~~l~g~~~~~~i~~isp~~~~~~etl~tL~fa~r~~~~~~~~~~~~~~~~ 792 (801)
+||.+|+.+ ..||||||||||+||+|+|||||+|+||+||||+..+++||++||+||+|++.|+++++++.....
T Consensus 320 ~vI~aL~~~---~~hiPyRdSkLT~LLqdsLgGnskt~mI~~vsP~~~~~~ETl~TLrfA~rv~~i~~~~~~~n~~~~ 394 (412)
T 3u06_A 320 NVILALLQK---QDHIPYRNSKLTHLLMPSLGGNSKTLMFINVSPFQDCFQESVKSLRFAASVNSCKMTKAKRNRYLN 394 (412)
T ss_dssp HHHHHHHTT---CSCCCGGGSHHHHHHGGGTSTTCEEEEEEEECCBGGGHHHHHHHHHHHHHHHHHCC----------
T ss_pred HHHHHHHCC---CCCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 999998635---888873243788988986189966999999489733489999999999997432466662233577
No 3
>3t0q_A AGR253WP; kinesin, alpha and beta proteins, P-loop containing nucleosi triphosphate hydrolases, microtubule motor protein; HET: ADP; 2.35A {Ashbya gossypii}
Probab=1.00 E-value=1 Score=608.55 Aligned_cols=344 Identities=48% Similarity=0.758 Sum_probs=299.6
Q ss_pred HCCCCCEEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEC---CCCEEEEEECEECCCCCCHHHHHHHHHHHHH
Q ss_conf 0025742488641799999899999732771798655564124401---8941578712250999883567998999999
Q 003711 435 LELKGNIRVFCRVRPLLPDDSSGSEGKLISYPTTTEALGRGIDIMQ---NGQKHSFSFDRVFMPDESQEDVFVEISQLVQ 511 (801)
Q Consensus 435 ~~l~~~i~v~~r~~~~~~~e~~~~~~~~i~~~~~~~~~~~~~~~~~---~~~~~~~~fd~vf~~~~~q~~v~~~~~~lv~ 511 (801)
++++++|+|||||||+.+.|...+....+.++.... ....+.+.. ....+.|.||+||+++++|++||+++.|+|+
T Consensus 1 m~lkgnIrV~vRvRP~~~~E~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~f~FD~Vf~~~~~Q~~vf~~v~~lv~ 79 (349)
T 3t0q_A 1 MALRGNIRVYCRVRPPLLNEPQDMSHILIEKFNEAK-GAQSLTINRNEGRILSYNFQFDMIFEPSHTNKEIFEEIRQLVQ 79 (349)
T ss_dssp ----CEEEEEEEECCCCTTSCCCCTTEEECCCBC---CBEEEEEEECC--CEEEEEEESEEECTTCCHHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCC-CCEEEEECCCCCCCCCEEEECCEEECCCCCHHHHHHHHHHHHH
T ss_conf 998998389999697995522368637886126778-8438998478886441466568797987668899999999999
Q ss_pred HHHCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCEECCCCCCC
Q ss_conf 96468744798532577655203013899999877627999999999985100497236999999998461001359984
Q 003711 512 SALDGYKVCIFAYGQTGSGKTYTMMGKPGHPDLKGLIPRSLEQIFQTRQSLLSQGWKYEMQVSMLEIYNETIRDLLSTNR 591 (801)
Q Consensus 512 ~~~~G~~~~i~~~G~t~sGKt~tl~G~~~~~~~~Gii~~~~~~lf~~~~~~~~~~~~~~v~~S~~ei~~e~v~DLL~~~~ 591 (801)
++++|||+||||||+|||||||||+|+. .|||||++++||..+......++.|.|.+||+|||||+|+|||.+..
T Consensus 80 ~~l~G~n~tifAYGqTGSGKTyTm~g~~-----~Giipr~~~~lF~~~~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~ 154 (349)
T 3t0q_A 80 SSLDGYNVCIFAYGQTGSGKTYTMLNAG-----DGMIPMTLSHIFKWTANLKERGWNYEMECEYIEIYNETILDLLRDFK 154 (349)
T ss_dssp GGGTTCEEEEEEECSTTSSHHHHHHSTT-----TSHHHHHHHHHHHHHHHHGGGTEEEEEEEEEEEEETTEEEETTC---
T ss_pred HHHCCCCEEEEEECCCCCCCCEEECCCC-----CCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCHHHCCCCCCC
T ss_conf 9977952368886789999963758998-----84466799999999987550485268999999997560110235645
Q ss_pred CCHHHHHCCCCCCEEEEECC-CCCEEECCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEECCCC
Q ss_conf 30122100489731787589-99869813479991796799999999841186566778878888543999999620378
Q 003711 592 DASRLENACNGKQYAIKHDA-SGNTHVTDLTVVDVCSTKEVSYLLDRAAHSRSVGKTQMNEQSSRSHFVFTLRISGLNES 670 (801)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~s~~e~~~~l~~~~~~r~~~~~~~~~~ssrsh~i~~i~i~~~~~~ 670 (801)
.............+.+++++ .+++++.|++++.|.+.+++..++..|..+|.+++|.+|..|||||+||+|+|.+.+..
T Consensus 155 ~~~~~~~~~~~~~~~i~~~~~~~g~~v~~l~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~ 234 (349)
T 3t0q_A 155 SHDNIDEILDSQKHDIRHDHEKQGTYITNVTRMKMTSTSQVDTILKKASKMRSTAATRSNERSSRSHSVFMVHINGRNLH 234 (349)
T ss_dssp ------------CCCEEEETTTTEEEETTCCCEECCCHHHHHHHHHHC------------CTGGGSEEEEEEEEEEEETT
T ss_pred CCCCCCCCCCCCCCEEEEECCCCCEEEECCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEECC
T ss_conf 44542223566664058966989889719879994899999999999997376023456454677525899999977358
Q ss_pred CCCEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 87459988999964799665578886403067799999898899999998604679998655776222243454589851
Q 003711 671 TEQQVQGILNLIDLAGSERLSKSGSTGDRLKETQAINKSLSSLSDVIFALAKKEKKEDHVPFRNSKLTYLLQPCLGGDSK 750 (801)
Q Consensus 671 ~~~~~~~~l~~vDLag~e~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~~~~~~~~p~r~s~LT~lL~~~l~g~~~ 750 (801)
......|+|+|||||||||..+++..|.+++|+..||+||++|++||.+|+.+..+..||||||||||+||+|+|||||+
T Consensus 235 ~~~~~~~kL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~~~hiPyRdSkLT~lLqdsLgGnsk 314 (349)
T 3t0q_A 235 TGETSQGKLNLVDLAGSERINSSAVTGERLRETQNINKSLSCLGDVIYALNTPDAGKRYIPFRNSKLTYLLQYSLVGDSK 314 (349)
T ss_dssp TCCEEEEEEEEEECCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHHHHHSTTGGGSCCCGGGSHHHHHHGGGSSTTCE
T ss_pred CCCEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCE
T ss_conf 89865799999948998754445675310055776517499999999998553688885777478888988986389964
Q ss_pred EEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 7999963999877898799999998840040389
Q 003711 751 TLMFVNISPEASSVGESLCSLRFAARVNACEIGT 784 (801)
Q Consensus 751 ~~~i~~isp~~~~~~etl~tL~fa~r~~~~~~~~ 784 (801)
|+||+||||+..+++||++||+||+|++.|++++
T Consensus 315 t~mi~~vsP~~~~~~ETl~TL~fA~rv~~ik~~~ 348 (349)
T 3t0q_A 315 TLMFVNIPPDPNHISETLNSLRFASKVNSTKIAK 348 (349)
T ss_dssp EEEEEEECCCGGGHHHHHHHHHHHHHHHC-----
T ss_pred EEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 9999980886213999999999999860163479
No 4
>4h1g_A Maltose binding protein-cakar3 motor domain fusio; kinesin motor domain, motor protein, chimera; HET: MTT ADP EDO; 2.15A {Escherichia coli}
Probab=1.00 E-value=1 Score=607.33 Aligned_cols=344 Identities=47% Similarity=0.735 Sum_probs=301.4
Q ss_pred HHHHHHHHHHHHCCCCCEEEEEEEC----CCCCCCCCCC-CCCEEECCCCCCCCCCCEEEE-C----CCCEEEEEECEEC
Q ss_conf 9977421001000257424886417----9999989999-973277179865556412440-1----8941578712250
Q 003711 424 EKLRKRLHNTILELKGNIRVFCRVR----PLLPDDSSGS-EGKLISYPTTTEALGRGIDIM-Q----NGQKHSFSFDRVF 493 (801)
Q Consensus 424 e~~~~~l~~~l~~l~~~i~v~~r~~----~~~~~e~~~~-~~~~i~~~~~~~~~~~~~~~~-~----~~~~~~~~fd~vf 493 (801)
+..++..+.++..+.+++||||||| |....+++++ ...++..|....-..+..... . ....+.|.||+||
T Consensus 359 eeAL~~Aq~~~~~il~~~rV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~fd~vf 438 (715)
T 4h1g_A 359 DAALAAAQTNAAALKGNIRVFCRIRNVSSSSSSSSSSSSEDIIQYEAPQDINDESKQELVITRNINNNFSNLRFLFDKIF 438 (715)
T ss_dssp HHHHHHHHHHHSSSSCSEEEEEEECCCC-------------BCEEECCC-------CEEEEEEEETTEEEEEEEECSEEE
T ss_pred HHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCEEEECCCCCCCCCCEEEEECEEE
T ss_conf 99999999999999755869999731433322111222333111269888888998759980799999887089745172
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEE
Q ss_conf 99988356799899999996468744798532577655203013899999877627999999999985100497236999
Q 003711 494 MPDESQEDVFVEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGKPGHPDLKGLIPRSLEQIFQTRQSLLSQGWKYEMQV 573 (801)
Q Consensus 494 ~~~~~q~~v~~~~~~lv~~~~~G~~~~i~~~G~t~sGKt~tl~G~~~~~~~~Gii~~~~~~lf~~~~~~~~~~~~~~v~~ 573 (801)
+++++|++||+.+.|+|+++++|+|+||||||+|||||||||+|+. .|||||++++||..+......+..|.|.|
T Consensus 439 ~~~~~q~~v~~~~~~~v~~~~~G~n~~i~ayGqtgsGKT~Tm~g~~-----~Giipr~~~~lf~~~~~~~~~~~~~~v~~ 513 (715)
T 4h1g_A 439 EREQSNDLVFEELSQLIQCSLDGTNVCVFAYGQTGSGKTFTMSHPT-----NGMIPLSLKKIFNDIEELKEKGWSYTVRG 513 (715)
T ss_dssp CSSCCHHHHGGGTHHHHHHHHTTCCEEEEEESSTTSSHHHHHHCTT-----TSHHHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHCCCCCC-----CCCHHHHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf 9999999999999999999968966999800889995500368999-----99499999999999887533794599999
Q ss_pred EEEEEECCCEECCCCCCCCCHHHHHCCCCCCEEEEE-CCCCCEEECCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 999998461001359984301221004897317875-8999869813479991796799999999841186566778878
Q 003711 574 SMLEIYNETIRDLLSTNRDASRLENACNGKQYAIKH-DASGNTHVTDLTVVDVCSTKEVSYLLDRAAHSRSVGKTQMNEQ 652 (801)
Q Consensus 574 S~~ei~~e~v~DLL~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~s~~e~~~~l~~~~~~r~~~~~~~~~~ 652 (801)
||+|||+|+|+|||.+... +...+.+++ +..+++++.|++++.|.|.++++.++..|..+|.+++|.+|..
T Consensus 514 s~~Eiyne~i~DLl~~~~~--------~~~~~~~~~~~~~g~~~v~~l~~~~v~~~~~~~~~~~~g~~~r~~~~t~~n~~ 585 (715)
T 4h1g_A 514 KFIEIYNEAIVDLLNPKID--------PNTKYEIKHDDIAGKTTVTNVSTIDIKSPEQAITILNQANKKRSTAATKSNDH 585 (715)
T ss_dssp EEEEEETTEEEESSSCCCC--------TTCCCCEEEETTTTEEEETTCCCEECSCHHHHHHHHHHHHCC----------C
T ss_pred EEEEEECCEEEECCCCCCC--------CCCCCEEEEECCCCCEEEECCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 9999989998999899988--------88762468866999989818889985999999999999874067155656576
Q ss_pred CCCCEEEEEEEEEECCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 88854399999962037887459988999964799665578886403067799999898899999998604679998655
Q 003711 653 SSRSHFVFTLRISGLNESTEQQVQGILNLIDLAGSERLSKSGSTGDRLKETQAINKSLSSLSDVIFALAKKEKKEDHVPF 732 (801)
Q Consensus 653 ssrsh~i~~i~i~~~~~~~~~~~~~~l~~vDLag~e~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~~~~~~~~p~ 732 (801)
|||||+||+|+|.+.+........|+|+|||||||||..+++..+.+++|+..||+||++|++||.+|+.+ +..||||
T Consensus 586 ssRSH~i~~i~~~~~~~~~~~~~~~~l~lvDLAGsEr~~~~~~~g~~~~E~~~IN~sL~~L~~vi~al~~~--~~~~vpy 663 (715)
T 4h1g_A 586 SSRSHSIFIIDLQGYNSLTKESSYGTLNLIDLAGSERLNNSRAEGDRLKETQAINKSLSCLGDVIHSLNLK--DGSHVPY 663 (715)
T ss_dssp GGGSEEEEEEEEEEEETTTCCEEEEEEEEEECCCCCC---------CHHHHHHHHHHHHHHHHHHHHHHHC--SCCCCCG
T ss_pred CCCCCEEEEEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCCCCCC
T ss_conf 35661999999999955988776899999918986302314780188999999888899999999998656--9891887
Q ss_pred CCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCC
Q ss_conf 77622224345458985179999639998778987999999988400403
Q 003711 733 RNSKLTYLLQPCLGGDSKTLMFVNISPEASSVGESLCSLRFAARVNACEI 782 (801)
Q Consensus 733 r~s~LT~lL~~~l~g~~~~~~i~~isp~~~~~~etl~tL~fa~r~~~~~~ 782 (801)
|+||||+||+|+|||||+|+|||||||+..+++||++||+||+|++.|++
T Consensus 664 R~SkLT~lL~~slggn~~t~~i~~isp~~~~~~et~~tL~fa~r~~~i~~ 713 (715)
T 4h1g_A 664 RNSKLTYLLKHSLGGNSKTLMFVNISPLTKDLNETINSLRFATKVNNTRI 713 (715)
T ss_dssp GGCHHHHHTGGGTSTTCEEEEEEEECCBGGGHHHHHHHHHHHHHHCC---
T ss_pred CCCHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCEE
T ss_conf 45988997775368874499999979775669999999999998422612
No 5
>2rep_A Kinesin-like protein KIFC1; structural genomics consortium, motor domain, ADP, binding, cell cycle, cell division, endosome, microtubule; HET: ADP; 2.60A {Homo sapiens}
Probab=1.00 E-value=1 Score=604.29 Aligned_cols=344 Identities=53% Similarity=0.816 Sum_probs=299.8
Q ss_pred HHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCEEECCCCC---CCCCCCEEEE-------------CCCCEEEEEEC
Q ss_conf 7421001000257424886417999998999997327717986---5556412440-------------18941578712
Q 003711 427 RKRLHNTILELKGNIRVFCRVRPLLPDDSSGSEGKLISYPTTT---EALGRGIDIM-------------QNGQKHSFSFD 490 (801)
Q Consensus 427 ~~~l~~~l~~l~~~i~v~~r~~~~~~~e~~~~~~~~i~~~~~~---~~~~~~~~~~-------------~~~~~~~~~fd 490 (801)
...+++++.+++++|+|+|||||+.+.|...+.. .+.++... ......+.+. ...+.+.|.||
T Consensus 10 ~~~~hn~~~~~~~~irV~vRvRP~~~~E~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~F~FD 88 (376)
T 2rep_A 10 HSSGLVPRGSLKGNIRVFCRVRPVLPGEPTPPPG-LLLFPSGPGGPSDPPTRLSLSRSDERRGTLSGAPAPPPRHDFSFD 88 (376)
T ss_dssp -------------CEEEEEEECCCCTTSCCCCGG-GSBCCC------CCCCEEECCC-----------------CEEECS
T ss_pred CCCCCCHHHCCCCCEEEEEECCCCCHHHCCCCCC-EEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEC
T ss_conf 3212321122689839999919789355056985-499816766656788579994477654322566677874566524
Q ss_pred EECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEECCCCC-CCCCCCCHHHHHHHHHHHHHHHHHCCCEE
Q ss_conf 25099988356799899999996468744798532577655203013899-99987762799999999998510049723
Q 003711 491 RVFMPDESQEDVFVEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGKPG-HPDLKGLIPRSLEQIFQTRQSLLSQGWKY 569 (801)
Q Consensus 491 ~vf~~~~~q~~v~~~~~~lv~~~~~G~~~~i~~~G~t~sGKt~tl~G~~~-~~~~~Gii~~~~~~lf~~~~~~~~~~~~~ 569 (801)
+||+++++|++||+.+.|+|+++++|||+||||||+|||||||||+|++. ++...|||||++++||..+......++.|
T Consensus 89 ~Vf~~~~~Q~~Vy~~v~~lv~~~l~G~N~tifAYGqTGSGKTyTM~G~~~~~~~~~Giipr~~~~lF~~i~~~~~~~~~~ 168 (376)
T 2rep_A 89 RVFPPGSGQDEVFEEIAMLVQSALDGYPVCIFAYGQTGSGKTFTMEGGPGGDPQLEGLIPRALRHLFSVAQELSGQGWTY 168 (376)
T ss_dssp EEECTTCCHHHHHHHHHHHHHGGGGTCCEEEEEECSTTSSHHHHHTBCSSCCGGGBCHHHHHHHHHHHHHHHGGGGTEEE
T ss_pred EECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEE
T ss_conf 78488655002345477788874389754999767899987068666888886658807999999999999744477289
Q ss_pred EEEEEEEEEECCCEECCCCCCCCCHHHHHCCCCCCEEEEEC--CCCCEEECCCEEEEECCHHHHHHHHHHHHHCCCCCCC
Q ss_conf 69999999984610013599843012210048973178758--9998698134799917967999999998411865667
Q 003711 570 EMQVSMLEIYNETIRDLLSTNRDASRLENACNGKQYAIKHD--ASGNTHVTDLTVVDVCSTKEVSYLLDRAAHSRSVGKT 647 (801)
Q Consensus 570 ~v~~S~~ei~~e~v~DLL~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~v~s~~e~~~~l~~~~~~r~~~~~ 647 (801)
.|.+||+|||||+|+|||.+.... .....+.++++ ..+++++.|++++.|.++++++.++..|..+|.+++|
T Consensus 169 ~v~vS~~EIYnE~i~DLL~~~~~~------~~~~~l~ir~~~~~~~~~~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T 242 (376)
T 2rep_A 169 SFVASYVEIYNETVRDLLATGTRK------GQGGECEIRRAGPGSEELTVTNARYVPVSCEKEVDALLHLARQNRAVART 242 (376)
T ss_dssp EEEEEEEEEETTEEEETTCCC--------------CCEEEC---CCCEEETTCCCEEECSHHHHHHHHHHHHHHHHHCC-
T ss_pred EEEEEEEEEECCEEEECCCCCCCC------CCCCCCEEEECCCCCCCEEECCCEEEEECCHHHHHHHHHHHHHHCCCCCC
T ss_conf 999999999888866724442223------56777237752378898797796799947899999999999743666224
Q ss_pred CCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEEEEECCCCCCCCCCCCCC----CCCHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 78878888543999999620378874599889999647996655788864----03067799999898899999998604
Q 003711 648 QMNEQSSRSHFVFTLRISGLNESTEQQVQGILNLIDLAGSERLSKSGSTG----DRLKETQAINKSLSSLSDVIFALAKK 723 (801)
Q Consensus 648 ~~~~~ssrsh~i~~i~i~~~~~~~~~~~~~~l~~vDLag~e~~~~~~~~~----~~~~e~~~in~sl~~L~~vi~~l~~~ 723 (801)
.+|..|||||+||+|.|.+.+........|+|+|||||||||..+.+..| .+++|+..||+||++|++||.+|+.+
T Consensus 243 ~~N~~SSRSH~Ifti~v~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~~~~~rlkE~~~INkSL~aLg~vI~aL~~~ 322 (376)
T 2rep_A 243 AQNERSSRSHSVFQLQISGEHSSRGLQCGAPLSLVDLAGSERLDPGLALGPGERERLRETQAINSSLSTLGLVIMALSNK 322 (376)
T ss_dssp ----CGGGSEEEEEEEEEEEESSSCCEEEEEEEEEECCCCC------------------------CHHHHHHHHHHHHTT
T ss_pred CCCCCCCCCEEEEEEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 47887777549999999988369896777678999788775356556667654212367767608899999999998558
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 679998655776222243454589851799996399987789879999999884004
Q 003711 724 EKKEDHVPFRNSKLTYLLQPCLGGDSKTLMFVNISPEASSVGESLCSLRFAARVNAC 780 (801)
Q Consensus 724 ~~~~~~~p~r~s~LT~lL~~~l~g~~~~~~i~~isp~~~~~~etl~tL~fa~r~~~~ 780 (801)
..||||||||||+||+|+|||||+|+||+||||+..+++||++||+||+|++.|
T Consensus 323 ---~~hVPYRdSkLT~LLqdsLgGnskT~mIa~isP~~~~~~ETlsTLrfA~Rv~~~ 376 (376)
T 2rep_A 323 ---ESHVPYRNSKLTYLLQNSLGGSAKMLMFVNISPLEENVSESLNSLRFASKVNQC 376 (376)
T ss_dssp ---CSCCCGGGSHHHHHTGGGTSTTCEEEEEEEECCCGGGHHHHHHHHHHHHHHC--
T ss_pred ---CCCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHCC
T ss_conf ---983577578889998986189870999999698522399999999999997429
No 6
>3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A*
Probab=1.00 E-value=1 Score=603.42 Aligned_cols=335 Identities=42% Similarity=0.695 Sum_probs=299.7
Q ss_pred HCCCCCEEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCEEE-ECCCCEEEEEECEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 00257424886417999998999997327717986555641244-01894157871225099988356799899999996
Q 003711 435 LELKGNIRVFCRVRPLLPDDSSGSEGKLISYPTTTEALGRGIDI-MQNGQKHSFSFDRVFMPDESQEDVFVEISQLVQSA 513 (801)
Q Consensus 435 ~~l~~~i~v~~r~~~~~~~e~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~fd~vf~~~~~q~~v~~~~~~lv~~~ 513 (801)
++++++|+|+|||||+...|...+....+..+... .+.. ...+..+.|.||+||+++++|.+||+.+.|+|+++
T Consensus 1 ee~~~~i~V~vRvRP~~~~E~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~f~FD~Vf~~~~~Q~~Vy~~~~~lv~~~ 75 (369)
T 3cob_A 1 EDMKGKIRVYCRLRPLCEKEIIAKERNAIRSVDEF-----TVEHLWKDDKAKQHMYDRVFDGNATQDDVFEDTKYLVQSA 75 (369)
T ss_dssp ---CCBCEEEEEECCCCHHHHHTTCCBCEEECSSS-----EEEEECTTSCEEEEECSEEECTTCCHHHHHHTTTHHHHHH
T ss_pred CCCCCCEEEEEECCCCCHHHCCCCCCEEEECCCCE-----EEEECCCCCCCEEEECCEEECCCCCCCEEHHHHHHHHHHH
T ss_conf 98899849999879998345467983799769967-----9993378998268865989899997314022131325766
Q ss_pred HCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCEECCCCCCCCC
Q ss_conf 46874479853257765520301389999987762799999999998510049723699999999846100135998430
Q 003711 514 LDGYKVCIFAYGQTGSGKTYTMMGKPGHPDLKGLIPRSLEQIFQTRQSLLSQGWKYEMQVSMLEIYNETIRDLLSTNRDA 593 (801)
Q Consensus 514 ~~G~~~~i~~~G~t~sGKt~tl~G~~~~~~~~Gii~~~~~~lf~~~~~~~~~~~~~~v~~S~~ei~~e~v~DLL~~~~~~ 593 (801)
++|||+||||||+|||||||||+|++.++ |||||++.+||..+... ...+.|.|.+||+|||+|+|+|||.+...
T Consensus 76 l~G~n~tifAYGqTGSGKTyTM~G~~~~~---Giipr~~~~lF~~i~~~-~~~~~~~v~vS~~EIYnE~i~DLL~~~~~- 150 (369)
T 3cob_A 76 VDGYNVCIFAYGQTGSGKTFTIYGADSNP---GLTPRAMSELFRIMKKD-SNKFSFSLKAYMVELYQDTLVDLLLPKQA- 150 (369)
T ss_dssp HTTCEEEEEEEECTTSSHHHHHTBCSSSB---CHHHHHHHHHHHHHHHT-TTTEEEEEEEEEEEECSSCEEESSCCSSS-
T ss_pred HCCCCEEEEEECCCCCCCEEEECCCCCCC---CHHHHHHHHHHHHHHHH-CCCCEEEEEEEEEEEECCEEEECCCCCCC-
T ss_conf 46971599987899998837511799888---62589999999998741-35752677899987707632345787556-
Q ss_pred HHHHHCCCCCCEEEEECCCCCEEECCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCC
Q ss_conf 12210048973178758999869813479991796799999999841186566778878888543999999620378874
Q 003711 594 SRLENACNGKQYAIKHDASGNTHVTDLTVVDVCSTKEVSYLLDRAAHSRSVGKTQMNEQSSRSHFVFTLRISGLNESTEQ 673 (801)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~s~~e~~~~l~~~~~~r~~~~~~~~~~ssrsh~i~~i~i~~~~~~~~~ 673 (801)
....+.+++++.+++++.|++++.|.++++++.++..|..+|.+++|.+|..|||||+||+|+|.+.+.....
T Consensus 151 -------~~~~l~i~e~~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~ 223 (369)
T 3cob_A 151 -------KRLKLDIKKDSKGMVSVENVTVVSISTYEELKTIIQRGSEQRHTTGTLMNEQSSRSHLIVSVIIESTNLQTQA 223 (369)
T ss_dssp -------CCCCCEEEECTTSCEEEETCCCEEECSHHHHHHHHHHHHHHTCCCSCCTTCHHHHSEEEEEEEEEEEETTTCC
T ss_pred -------CCCCEEEEECCCCCEECCCCEEEEECCHHHHHHHHHHHHHCCEEECCCCCCCCCCCEEEEEEEEEEECCCCCC
T ss_conf -------7764278997999888059879980899999999998752552303447787776338999999985278772
Q ss_pred EEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
Q ss_conf 59988999964799665578886403067799999898899999998604679998655776222243454589851799
Q 003711 674 QVQGILNLIDLAGSERLSKSGSTGDRLKETQAINKSLSSLSDVIFALAKKEKKEDHVPFRNSKLTYLLQPCLGGDSKTLM 753 (801)
Q Consensus 674 ~~~~~l~~vDLag~e~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~~~~~~~~p~r~s~LT~lL~~~l~g~~~~~~ 753 (801)
...|+|+|||||||||..+++..|.+++|+..||+||++|++||.+|+.+ ..||||||||||+||+|+|||||+|+|
T Consensus 224 ~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~---~~hvPyRdSkLT~lLqdsLgGnskt~m 300 (369)
T 3cob_A 224 IARGKLSFVDLAGSERVKKSGSAGNQLKEAQSINKSLSALGDVISALSSG---NQHIPYRNHKLTMLMSDSLGGNAKTLM 300 (369)
T ss_dssp EEEEEEEEEECCCSSCCCCCSSCSHHHHHHHHHTHHHHHHHHHHHHHHTT---CSCCCGGGCHHHHHTTTTTTSSSEEEE
T ss_pred EEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCCCHHHHHHHHHCCCCCCEEE
T ss_conf 78889999968878754434763023477878778899999999998648---996787477778878876289852799
Q ss_pred EEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 996399987789879999999884004038986556
Q 003711 754 FVNISPEASSVGESLCSLRFAARVNACEIGTPRRQT 789 (801)
Q Consensus 754 i~~isp~~~~~~etl~tL~fa~r~~~~~~~~~~~~~ 789 (801)
|+||||+..+++||++||+||+|++.|++.|..+..
T Consensus 301 Ia~isP~~~~~~ETl~TLrfA~rak~i~~~~~~n~~ 336 (369)
T 3cob_A 301 FVNISPAESNLDETHNSLTYASRVRSIVNDPSKNVS 336 (369)
T ss_dssp EEEECCBGGGHHHHHHHHHHHHHHHTCBCCCCCCEE
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 999477200289999999999998654567741578
No 7
>2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A*
Probab=1.00 E-value=1 Score=599.50 Aligned_cols=333 Identities=36% Similarity=0.573 Sum_probs=301.0
Q ss_pred CCCCCEEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCEEEECCCCEEEEEECEECCCCCCHHHHHHH-HHHHHHHHH
Q ss_conf 0257424886417999998999997327717986555641244018941578712250999883567998-999999964
Q 003711 436 ELKGNIRVFCRVRPLLPDDSSGSEGKLISYPTTTEALGRGIDIMQNGQKHSFSFDRVFMPDESQEDVFVE-ISQLVQSAL 514 (801)
Q Consensus 436 ~l~~~i~v~~r~~~~~~~e~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~fd~vf~~~~~q~~v~~~-~~~lv~~~~ 514 (801)
...++|+|+|||||+...|...+...++.++..... ..+. . ..+.|.||+||+++++|.+||+. +.|+|++++
T Consensus 8 ~~~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~--~~i~--~--~~~~f~FD~Vf~~~~~Q~~Vy~~~~~plv~~~l 81 (365)
T 2y65_A 8 PAEDSIKVVCRFRPLNDSEEKAGSKFVVKFPNNVEE--NCIS--I--AGKVYLFDKVFKPNASQEKVYNEAAKSIVTDVL 81 (365)
T ss_dssp CCEEECEEEEEECCCCHHHHHTTCCBCEECCSSSTT--CEEE--E--TTEEEECSEEECTTCCHHHHHHHHTHHHHHHHH
T ss_pred CCCCCEEEEEECCCCCHHHHCCCCCEEEEECCCCCC--CEEE--E--CCEEEECCEEECCCCCHHHHHHHHHHHHHHHHH
T ss_conf 899995999994969946731599259994799877--6799--8--998986746964789989999986303779986
Q ss_pred CCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCEECCCCCCCCCH
Q ss_conf 68744798532577655203013899999877627999999999985100497236999999998461001359984301
Q 003711 515 DGYKVCIFAYGQTGSGKTYTMMGKPGHPDLKGLIPRSLEQIFQTRQSLLSQGWKYEMQVSMLEIYNETIRDLLSTNRDAS 594 (801)
Q Consensus 515 ~G~~~~i~~~G~t~sGKt~tl~G~~~~~~~~Gii~~~~~~lf~~~~~~~~~~~~~~v~~S~~ei~~e~v~DLL~~~~~~~ 594 (801)
+|||+||||||+|||||||||+|+.+++...|||||++++||..+... ...+.|.|.+||+|||+|+|+|||.+..
T Consensus 82 ~G~n~tifAYGqTGSGKTyTm~G~~~~~~~~Giipr~~~~lF~~i~~~-~~~~~~~v~vS~~EIYnE~i~DLL~~~~--- 157 (365)
T 2y65_A 82 AGYNGTIFAYGQTSSGKTHTMEGVIGDSVKQGIIPRIVNDIFNHIYAM-EVNLEFHIKVSYYEIYMDKIRDLLDVSK--- 157 (365)
T ss_dssp TTCCEEEEEECSTTSSHHHHHTBSTTCTTTBCHHHHHHHHHHHHHHHC-CSCEEEEEEEEEEEEETTEEEETTCTTC---
T ss_pred CCCCEEEEEECCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHC-CCCCEEEEEEEEEEEECCEEEECCCCCC---
T ss_conf 798248983458999996488668887555773779999999999833-6895399999999998772126225876---
Q ss_pred HHHHCCCCCCEEEEECCCCCEEECCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCE
Q ss_conf 22100489731787589998698134799917967999999998411865667788788885439999996203788745
Q 003711 595 RLENACNGKQYAIKHDASGNTHVTDLTVVDVCSTKEVSYLLDRAAHSRSVGKTQMNEQSSRSHFVFTLRISGLNESTEQQ 674 (801)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~s~~e~~~~l~~~~~~r~~~~~~~~~~ssrsh~i~~i~i~~~~~~~~~~ 674 (801)
..+.+++++.+++++.|++++.|.|+++++.++..|..+|.+++|.+|..|||||+||+|+|.+.+......
T Consensus 158 --------~~l~i~e~~~~~~~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~ 229 (365)
T 2y65_A 158 --------VNLSVHEDKNRVPYVKGATERFVSSPEDVFEVIEEGKSNRHIAVTNMNEHSSRSHSVFLINVKQENLENQKK 229 (365)
T ss_dssp --------CSBCEEECSSSCEEETTCCCEEECSHHHHHHHHHHHHHHHTTTCSCHHHHHHTSEEEEEEEEEEEETTTCCE
T ss_pred --------CCCEEEECCCCCEEECCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCE
T ss_conf --------772378879998784278899658799999999999864665235688878876399999999970588878
Q ss_pred EEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
Q ss_conf 99889999647996655788864030677999998988999999986046799986557762222434545898517999
Q 003711 675 VQGILNLIDLAGSERLSKSGSTGDRLKETQAINKSLSSLSDVIFALAKKEKKEDHVPFRNSKLTYLLQPCLGGDSKTLMF 754 (801)
Q Consensus 675 ~~~~l~~vDLag~e~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~~~~~~~~p~r~s~LT~lL~~~l~g~~~~~~i 754 (801)
..|+|+|||||||||..+.+..|.+++|+..||+||++|++||.+|+.+. ..||||||||||+||+|+|||||+|+||
T Consensus 230 ~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~--~~hvPyRdSkLT~lLqdsLgGnskt~mI 307 (365)
T 2y65_A 230 LSGKLYLVDLAGSEKVSKTGAEGTVLDEAKNINKSLSALGNVISALADGN--KTHIPYRDSKLTRILQESLGGNARTTIV 307 (365)
T ss_dssp EEEEEEEEECCCCCC----------------CCHHHHHHHHHHHHHHHCC--CSCCCGGGCHHHHHTGGGTTSSSEEEEE
T ss_pred EEEEEEEEECCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC--CCCCCCCCCHHHHHHHHHCCCCCCEEEE
T ss_conf 68999999799988201218952247899888888999998999985278--8878663578889877613899637999
Q ss_pred EECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 9639998778987999999988400403898655
Q 003711 755 VNISPEASSVGESLCSLRFAARVNACEIGTPRRQ 788 (801)
Q Consensus 755 ~~isp~~~~~~etl~tL~fa~r~~~~~~~~~~~~ 788 (801)
+||||+..+++||++||+||.|++.|++.|....
T Consensus 308 ~~isP~~~~~~ETl~TL~fA~rak~I~n~~~~n~ 341 (365)
T 2y65_A 308 ICCSPASFNESETKSTLDFGRRAKTVKNVVCVNE 341 (365)
T ss_dssp EEECCBGGGHHHHHHHHHHHHHHTTCEEECCCEE
T ss_pred EEECCCCCCHHHHHHHHHHHHHHHCCCCCCEECC
T ss_conf 9846752788999999999999721567541178
No 8
>3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A*
Probab=1.00 E-value=1 Score=597.81 Aligned_cols=339 Identities=39% Similarity=0.607 Sum_probs=299.6
Q ss_pred HHHCCCCCEEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEC-----CCCEEEEEECEECCCCCCHHHHHHH-H
Q ss_conf 100025742488641799999899999732771798655564124401-----8941578712250999883567998-9
Q 003711 433 TILELKGNIRVFCRVRPLLPDDSSGSEGKLISYPTTTEALGRGIDIMQ-----NGQKHSFSFDRVFMPDESQEDVFVE-I 506 (801)
Q Consensus 433 ~l~~l~~~i~v~~r~~~~~~~e~~~~~~~~i~~~~~~~~~~~~~~~~~-----~~~~~~~~fd~vf~~~~~q~~v~~~-~ 506 (801)
......++|+|+|||||+...|...+...++.+..... .+.+.. ....+.|.||+||+++++|.+||+. +
T Consensus 15 ~~~~~~~~irV~vRvRP~~~~E~~~~~~~~v~~~~~~~----~v~v~~~~~~~~~~~~~F~FD~Vf~~~~~Q~~Vy~~~~ 90 (372)
T 3b6u_A 15 YFQGSSESVRVVVRCRPMNGKEKAASYDKVVDVDVKLG----QVSVKNPKGTAHEMPKTFTFDAVYDWNAKQFELYDETF 90 (372)
T ss_dssp ------CBCEEEEEECCCCHHHHHTTCCBCEEEETTTT----EEEECCTTCTTTCCCEEEECSEEECTTCCHHHHHHHTH
T ss_pred CCCCCCCCEEEEEECCCCCHHHHCCCCCEEEEEECCCC----EEEEECCCCCCCCCCEEEECCEEECCCCCHHHHHHHHH
T ss_conf 66789998399998698993553049963899958998----79997788777778438876869688674178988787
Q ss_pred HHHHHHHHCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCEECC
Q ss_conf 99999964687447985325776552030138999998776279999999999851004972369999999984610013
Q 003711 507 SQLVQSALDGYKVCIFAYGQTGSGKTYTMMGKPGHPDLKGLIPRSLEQIFQTRQSLLSQGWKYEMQVSMLEIYNETIRDL 586 (801)
Q Consensus 507 ~~lv~~~~~G~~~~i~~~G~t~sGKt~tl~G~~~~~~~~Gii~~~~~~lf~~~~~~~~~~~~~~v~~S~~ei~~e~v~DL 586 (801)
.|+|+++++|||+||||||+|||||||||+|...++...|||||++++||..+.. ...+.|.|.+||+|||+|+|+||
T Consensus 91 ~plv~~~l~G~n~tifAYGqTGSGKTyTM~G~~~~~~~~Giipr~~~~lF~~i~~--~~~~~~~v~vS~~EIYnE~i~DL 168 (372)
T 3b6u_A 91 RPLVDSVLQGFNGTIFAYGQTGTGKTYTMEGIRGDPEKRGVIPNSFDHIFTHISR--SQNQQYLVRASYLEIYQEEIRDL 168 (372)
T ss_dssp HHHHHHHHTTCCEEEEEEESTTSSHHHHHTBCTTSGGGBCHHHHHHHHHHHHHHT--CSSCEEEEEEEEEEEETTEEEET
T ss_pred HHHHHHHHCCCEEEEEEECCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHH--CCCCCEEEEEEEEEEECCEEEEC
T ss_conf 7778998679813588656899999875755899834488188999999998651--45773699998999967888997
Q ss_pred CCCCCCCHHHHHCCCCCCEEEEECCCCCEEECCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEE
Q ss_conf 59984301221004897317875899986981347999179679999999984118656677887888854399999962
Q 003711 587 LSTNRDASRLENACNGKQYAIKHDASGNTHVTDLTVVDVCSTKEVSYLLDRAAHSRSVGKTQMNEQSSRSHFVFTLRISG 666 (801)
Q Consensus 587 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~s~~e~~~~l~~~~~~r~~~~~~~~~~ssrsh~i~~i~i~~ 666 (801)
|.+.. ...+.+++++.+++++.|++++.|.+++|++.++..|..+|.+++|.+|..|||||+||+|+|..
T Consensus 169 L~~~~----------~~~l~i~e~~~~~v~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~If~i~v~~ 238 (372)
T 3b6u_A 169 LSKDQ----------TKRLELKERPDTGVYVKDLSSFVTKSVKEIEHVMNVGNQNRSVGATNMNEHSSRSHAIFVITIEC 238 (372)
T ss_dssp TSSCT----------TCCBCEEEETTTEEEETTCCCEECCSHHHHHHHHHHHHHHHTTTCSSHHHHHHTSEEEEEEEEEE
T ss_pred CCCCC----------CCCCEEEECCCCCEECCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEE
T ss_conf 78977----------77736898799967528988999267999999999999766725455778777642999999999
Q ss_pred CCCC---CCCEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 0378---8745998899996479966557888640306779999989889999999860467999865577622224345
Q 003711 667 LNES---TEQQVQGILNLIDLAGSERLSKSGSTGDRLKETQAINKSLSSLSDVIFALAKKEKKEDHVPFRNSKLTYLLQP 743 (801)
Q Consensus 667 ~~~~---~~~~~~~~l~~vDLag~e~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~~~~~~~~p~r~s~LT~lL~~ 743 (801)
.+.. ......|+|+|||||||||..+.+..|.+++|+..||+||++|++||.+|+.+ +..||||||||||+||+|
T Consensus 239 ~~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~--~~~hvPyRdSkLT~lLqd 316 (372)
T 3b6u_A 239 SEVGLDGENHIRVGKLNLVDLAGSERQAKTGAQGERLKEATKINLSLSALGNVISALVDG--KSTHIPYRDSKLTRLLQD 316 (372)
T ss_dssp EC-----CCCEEEEEEEEEECCCCCE----------EEEGGGCCHHHHHHHHHHHHHHCC-----CCCGGGSHHHHHTTT
T ss_pred EECCCCCCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC--CCCCCCCCCCHHHHHHHH
T ss_conf 604778876267889999979887655445751543146756506499999999998638--988786622088999998
Q ss_pred CCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 4589851799996399987789879999999884004038986556
Q 003711 744 CLGGDSKTLMFVNISPEASSVGESLCSLRFAARVNACEIGTPRRQT 789 (801)
Q Consensus 744 ~l~g~~~~~~i~~isp~~~~~~etl~tL~fa~r~~~~~~~~~~~~~ 789 (801)
+|||||+|+||+||||+..+++||++||+||+|++.|++.|.....
T Consensus 317 sLgGnskt~mIa~vsP~~~~~~ETlsTLrfA~rak~I~n~~~~n~~ 362 (372)
T 3b6u_A 317 SLGGNAKTVMVANVGPASYNVEETLTTLRYANRAKNIKNKPRVNED 362 (372)
T ss_dssp TTTSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHTTCBCCCCCCC-
T ss_pred HCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEECCC
T ss_conf 6299954899999688524799999999999998645566625577
No 9
>3lre_A Kinesin-like protein KIF18A; motor protein, nucleotide binding, microtubule binding, ATP- cell projection, cytoskeleton, glycoprotein, microtubule; HET: ADP; 2.20A {Homo sapiens} SCOP: c.37.1.0
Probab=1.00 E-value=1 Score=595.46 Aligned_cols=333 Identities=34% Similarity=0.534 Sum_probs=292.1
Q ss_pred HHHHCCCCCEEEEEEECCCCCCCCCCCCCCEEECCCCCCCC----CCCEE------------EECCCCEEEEEECEECCC
Q ss_conf 01000257424886417999998999997327717986555----64124------------401894157871225099
Q 003711 432 NTILELKGNIRVFCRVRPLLPDDSSGSEGKLISYPTTTEAL----GRGID------------IMQNGQKHSFSFDRVFMP 495 (801)
Q Consensus 432 ~~l~~l~~~i~v~~r~~~~~~~e~~~~~~~~i~~~~~~~~~----~~~~~------------~~~~~~~~~~~fd~vf~~ 495 (801)
....++.++|+|+|||||+...|...+...++.+++...+. ...+. .....+.+.|.||+||++
T Consensus 3 ~~~~d~~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~FD~vf~~ 82 (355)
T 3lre_A 3 VTEEDLCHHMKVVVRVRPENTKEKAAGFHKVVHVVDKHILVFDPKQEEVSFFHGKKTTNQNVIKKQNKDLKFVFDAVFDE 82 (355)
T ss_dssp ---------CEEEEEECCCCHHHHHTTCCBSEEECSSSEEEEC------------------------CCEEEECSEEECT
T ss_pred CCHHHCCCCCEEEEEECCCCHHHHHCCCCEEEEECCCCEEEECCCCCCCEEECCCCCCCCCCHHCCCCCCEEEECEEECC
T ss_conf 67022367878999939699578755995499965996698568877411203555444430002678716870568799
Q ss_pred CCCHHHHHHH-HHHHHHHHHCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEE
Q ss_conf 9883567998-999999964687447985325776552030138999998776279999999999851004972369999
Q 003711 496 DESQEDVFVE-ISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGKPGHPDLKGLIPRSLEQIFQTRQSLLSQGWKYEMQVS 574 (801)
Q Consensus 496 ~~~q~~v~~~-~~~lv~~~~~G~~~~i~~~G~t~sGKt~tl~G~~~~~~~~Gii~~~~~~lf~~~~~~~~~~~~~~v~~S 574 (801)
+++|++||+. +.|+|+++++|||+||||||+|||||||||+|++.++ |||||++.+||..+... .....|.|.+|
T Consensus 83 ~~~Q~~Vy~~~~~plv~~~l~G~n~tifAYGqTGSGKTyTm~G~~~~~---Giipr~~~~lf~~i~~~-~~~~~~~v~vS 158 (355)
T 3lre_A 83 TSTQSEVFEHTTKPILRSFLNGYNCTVLAYGATGAGKTHTMLGSADEP---GVMYLTMLHLYKCMDEI-KEEKICSTAVS 158 (355)
T ss_dssp TCCHHHHHHTTHHHHHHHHTTTCCEEEEEECCTTSSHHHHHTBCSSSB---CHHHHHHHHHHHHHHHT-TTTEEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEECCCCCCC---CEEEHHHHHHHHHHHHH-CCCCEEEEEEE
T ss_conf 887689999999999998737994699971889997242231689888---70102446777766520-45735999999
Q ss_pred EEEEECCCEECCCCCCCCCHHHHHCCCCCCEEEEECCCCCEEECCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 99998461001359984301221004897317875899986981347999179679999999984118656677887888
Q 003711 575 MLEIYNETIRDLLSTNRDASRLENACNGKQYAIKHDASGNTHVTDLTVVDVCSTKEVSYLLDRAAHSRSVGKTQMNEQSS 654 (801)
Q Consensus 575 ~~ei~~e~v~DLL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~s~~e~~~~l~~~~~~r~~~~~~~~~~ss 654 (801)
|+|||+|+|+|||.+. .++.+++++.+++++.|++++.|.+.+|++.++..|..+|.+++|.+|..||
T Consensus 159 ~~EIYnE~i~DLL~~~------------~~l~ire~~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SS 226 (355)
T 3lre_A 159 YLEVYNEQIRDLLVNS------------GPLAVREDTQKGVVVHGLTLHQPKSSEEILHLLDNGNKNRTQHPTDMNATSS 226 (355)
T ss_dssp EEEEETTEEEESSSCC------------CCBEEEECTTSCEEEETCCCBCCCSHHHHHHHHHHHHHTSCBC-----CBCT
T ss_pred EEEEECCEEEECCCCC------------CCCEEEECCCCCEEEEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 9999878779976787------------7723688489998853336995399999999999987327743265768778
Q ss_pred CCEEEEEEEEEECCCC---CCCEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 8543999999620378---8745998899996479966557888640306779999989889999999860467999865
Q 003711 655 RSHFVFTLRISGLNES---TEQQVQGILNLIDLAGSERLSKSGSTGDRLKETQAINKSLSSLSDVIFALAKKEKKEDHVP 731 (801)
Q Consensus 655 rsh~i~~i~i~~~~~~---~~~~~~~~l~~vDLag~e~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~~~~~~~~p 731 (801)
|||+||+|+|.+.+.. ......|+|+|||||||||..+.+..|.+++|+..||+||++|++||.+|+.+..+..|||
T Consensus 227 RSH~if~i~v~~~~~~~~~~~~~~~skl~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~~~hiP 306 (355)
T 3lre_A 227 RSHAVFQIYLRQQDKTASINQNVRIAKMSLIDLAGSERASTSGAKGTRFVEGTNINRSLLALGNVINALADSKRKNQHIP 306 (355)
T ss_dssp TCEEEEEEEEEEEETTSCTTCCCCCEEEEEEECCCCCC-----------------CHHHHHHHHHHHHHC--------CC
T ss_pred CCCEEEEEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 78299999999965778888777799999997988775767787337899999998999999879999871458898687
Q ss_pred CCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 5776222243454589851799996399987789879999999884004
Q 003711 732 FRNSKLTYLLQPCLGGDSKTLMFVNISPEASSVGESLCSLRFAARVNAC 780 (801)
Q Consensus 732 ~r~s~LT~lL~~~l~g~~~~~~i~~isp~~~~~~etl~tL~fa~r~~~~ 780 (801)
|||||||+||+|+|||||+|+||+||||+..+++||++||+||+|++.|
T Consensus 307 yRdSkLT~lL~dsLgGnskt~mIa~isP~~~~~~ETl~TL~fA~rak~I 355 (355)
T 3lre_A 307 YRNSKLTRLLKDSLGGNCQTIMIAAVSPSSVFYDDTYNTLKYANRAKDI 355 (355)
T ss_dssp GGGSHHHHHTTTTSSTTSEEEEEEEECCBGGGHHHHHHHHHHHHHTC--
T ss_pred CCCCHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCC
T ss_conf 6337888988986489965999999488622389999999999985659
No 10
>1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9
Probab=1.00 E-value=1 Score=594.49 Aligned_cols=334 Identities=38% Similarity=0.591 Sum_probs=300.2
Q ss_pred CCCCEEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCEEEECCCCEEEEEECEECCCCCCHHHHHHH-HHHHHHHHHC
Q ss_conf 257424886417999998999997327717986555641244018941578712250999883567998-9999999646
Q 003711 437 LKGNIRVFCRVRPLLPDDSSGSEGKLISYPTTTEALGRGIDIMQNGQKHSFSFDRVFMPDESQEDVFVE-ISQLVQSALD 515 (801)
Q Consensus 437 l~~~i~v~~r~~~~~~~e~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~fd~vf~~~~~q~~v~~~-~~~lv~~~~~ 515 (801)
-.++|+|+|||||+...|...+...++.+++... +.+......+.|.||+||+++++|++||+. +.|+|+++++
T Consensus 4 ~~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~-----~~~~~~~~~~~f~FD~Vf~~~~~Q~~Vy~~~~~plv~~~l~ 78 (355)
T 1goj_A 4 SANSIKVVARFRPQNRVEIESGGQPIVTFQGPDT-----CTVDSKEAQGSFTFDRVFDMSCKQSDIFDFSIKPTVDDILN 78 (355)
T ss_dssp SSCBCEEEEEECCCCHHHHTTTCCBCEEECSTTE-----EEECSTTCCEEEECSEEECTTCCHHHHHHHHTHHHHHHHTT
T ss_pred CCCCEEEEEECCCCCHHHHHCCCCEEEEECCCCE-----EEECCCCCCCEEEECEEECCCCCCHHHHHHHHHHHHHHHHC
T ss_conf 9998699998899995785069963999869984-----99726897527761959899876279999999999999857
Q ss_pred CCCEEEEEECCCCCCCCEEECCCCC-CCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCEECCCCCCCCCH
Q ss_conf 8744798532577655203013899-999877627999999999985100497236999999998461001359984301
Q 003711 516 GYKVCIFAYGQTGSGKTYTMMGKPG-HPDLKGLIPRSLEQIFQTRQSLLSQGWKYEMQVSMLEIYNETIRDLLSTNRDAS 594 (801)
Q Consensus 516 G~~~~i~~~G~t~sGKt~tl~G~~~-~~~~~Gii~~~~~~lf~~~~~~~~~~~~~~v~~S~~ei~~e~v~DLL~~~~~~~ 594 (801)
|||+||||||+|||||||||+|+.. ++...|||||++++||..+... ...+.|.|.+||+|||+|+|+|||.+..
T Consensus 79 G~n~tifAYGqTGSGKTyTm~G~~~~~~~~~Giipr~~~~lF~~i~~~-~~~~~~~v~vS~~EIYnE~i~DLL~~~~--- 154 (355)
T 1goj_A 79 GYNGTVFAYGQTGAGKSYTMMGTSIDDPDGRGVIPRIVEQIFTSILSS-AANIEYTVRVSYMEIYMERIRDLLAPQN--- 154 (355)
T ss_dssp TCCEEEEEECSTTSSHHHHHTBSCTTSTTTBCHHHHHHHHHHHHHHTS-CTTEEEEEEEEEEEEETTEEEETTSTTC---
T ss_pred CCCCEEEEECCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHC-CCCCEEEEEEEEEEEECCEEEECCCCCC---
T ss_conf 982228888999998606751578877666870679999999998714-5685089999999997897788445766---
Q ss_pred HHHHCCCCCCEEEEECCCCCEEECCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCE
Q ss_conf 22100489731787589998698134799917967999999998411865667788788885439999996203788745
Q 003711 595 RLENACNGKQYAIKHDASGNTHVTDLTVVDVCSTKEVSYLLDRAAHSRSVGKTQMNEQSSRSHFVFTLRISGLNESTEQQ 674 (801)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~s~~e~~~~l~~~~~~r~~~~~~~~~~ssrsh~i~~i~i~~~~~~~~~~ 674 (801)
..+.+++++.+++++.|++++.|.+++|++.++..|..+|.+++|.+|..|||||+||+|+|.+.+......
T Consensus 155 --------~~l~i~e~~~~g~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~ 226 (355)
T 1goj_A 155 --------DNLPVHEEKNRGVYVKGLLEIYVSSVQEVYEVMRRGGNARAVAATNMNQESSRSHSIFVITITQKNVETGSA 226 (355)
T ss_dssp --------CSCCEEEETTTEEEETTCCCEECCSHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEEEEEEEEEETTTTEE
T ss_pred --------CCCEEEECCCCCEEECCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCE
T ss_conf --------785268858999960687799579999999999999752472334478987776099999999960688955
Q ss_pred EEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
Q ss_conf 99889999647996655788864030677999998988999999986046799986557762222434545898517999
Q 003711 675 VQGILNLIDLAGSERLSKSGSTGDRLKETQAINKSLSSLSDVIFALAKKEKKEDHVPFRNSKLTYLLQPCLGGDSKTLMF 754 (801)
Q Consensus 675 ~~~~l~~vDLag~e~~~~~~~~~~~~~e~~~in~sl~~L~~vi~~l~~~~~~~~~~p~r~s~LT~lL~~~l~g~~~~~~i 754 (801)
..|+|+|||||||||..+.+..|.+++|+..||+||++|++||.+|+.+ +..||||||||||+||+|+|||||+|+||
T Consensus 227 ~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~aLg~vI~aL~~~--~~~hvPyRdSkLT~lLqdsLgGns~t~mI 304 (355)
T 1goj_A 227 KSGQLFLVDLAGSEKVGKTGASGQTLEEAKKINKSLSALGMVINALTDG--KSSHVPYRDSKLTRILQESLGGNSRTTLI 304 (355)
T ss_dssp EEEEEEEEECCCCSCCTTSSSCCCCTTTTGGGTSHHHHHHHHHHHHHHC--SCSCCCGGGCHHHHHTGGGTTSSCEEEEE
T ss_pred EEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC--CCCCCCCCCCHHHHHHHHHHCCCCCEEEE
T ss_conf 6657999989887744324660266788876516799999999998648--99988775579999999972899768999
Q ss_pred EECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 96399987789879999999884004038986556
Q 003711 755 VNISPEASSVGESLCSLRFAARVNACEIGTPRRQT 789 (801)
Q Consensus 755 ~~isp~~~~~~etl~tL~fa~r~~~~~~~~~~~~~ 789 (801)
+||||+..+++||++||+||+|++.|++.|.....
T Consensus 305 ~~isP~~~~~~ETl~TL~fA~rak~I~n~~~vn~~ 339 (355)
T 1goj_A 305 INCSPSSYNDAETLSTLRFGMRAKSIKNKAKVNAE 339 (355)
T ss_dssp EEECCBGGGHHHHHHHHHHHHHHHTCBCCCCCCSS
T ss_pred EEECCCCCCHHHHHHHHHHHHHHHHCCCCCEECCC
T ss_conf 99796302699999999999997236677556787
Done!