Query 003712
Match_columns 801
No_of_seqs 303 out of 1522
Neff 6.0
Searched_HMMs 29240
Date Tue Mar 26 18:41:29 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/003712.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1760-1763//hhsearch_pdb/003712hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2he9_A NK-tumor recognition pr 1.0 1 1 352.7 23.4 177 1-177 14-191 (192)
2 1a58_A Cyclophilin; isomerase, 1.0 1 1 352.7 23.3 176 1-176 1-177 (177)
3 2wfi_A Peptidyl-prolyl CIS-tra 1.0 1 1 350.4 23.5 175 1-175 3-179 (179)
4 1ihg_A Cyclophilin 40; ppiase 1.0 1 1 348.8 24.6 175 6-180 15-189 (370)
5 1z81_A Cyclophilin; structural 1.0 1 1 343.3 20.2 172 1-175 54-229 (229)
6 2poy_A Peptidyl-prolyl CIS-tra 1.0 1 1 341.9 22.0 173 1-174 14-186 (186)
7 2igv_A Peptidyl-prolyl CIS-tra 1.0 1 1 341.0 22.5 171 5-176 2-172 (173)
8 1mzw_A Cyclophilin H, U-snRNP- 1.0 1 1 338.0 20.2 171 2-175 6-177 (177)
9 1qng_A Peptidyl-prolyl CIS-tra 1.0 1 1 335.5 21.0 169 5-175 2-170 (170)
10 3rdd_A Peptidyl-prolyl CIS-tra 1.0 1 1 330.6 21.8 165 4-176 20-184 (184)
No 1
>2he9_A NK-tumor recognition protein; cyclosporin, isomerase, membrane, repeat, rotamase, peptidylprolyl isomerase, structural genomics; 2.00A {Homo sapiens}
Probab=1.00 E-value=1 Score=352.74 Aligned_cols=177 Identities=49% Similarity=0.806 Sum_probs=170.1
Q ss_pred CCCCCCCEEEEEEEECCCEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEECCCCC
Q ss_conf 98889848999997579033569999769987589999999860688999999988544698489954296233176768
Q 003712 1 MAKKKSLLVFMDVSIDGDPVERMVFELFSDIAPKTAENFRALCTGEKGIGPRTGKPLHYKGSFFHRVIKGSMAEGGDFVK 80 (801)
Q Consensus 1 m~~~~np~V~ldtsiG~~~~GRIvIeLf~d~aP~t~~nFl~Lc~G~~g~g~~~~k~~~Y~Gs~F~Riikg~~iQgGd~~~ 80 (801)
|.+..+|+||||+.+++.++|+|+||||+++||+||+||++||+|++|++..+++.+||+|+.||||+++||||+||++.
T Consensus 14 ~~~~~~~~vf~di~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~k~~~Y~g~~FhRVi~~fmiQgGd~~~ 93 (192)
T 2he9_A 14 LVPRGSPQCHFDIEINREPVGRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGKKLCYKGSTFHRVVKNFMIQGGDFSE 93 (192)
T ss_dssp -----CCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETTTEEEECCTTT
T ss_pred CCCCCCCEEEEEEEECCEECCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCCEEEEEECCCEEECCCCCC
T ss_conf 53457985999999898725259999848889568999999844877766554547718898999997897898586557
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEECHHHHHHHHHC-CCC
Q ss_conf 9999887445888889999988888944885125999977337997157988899982799999197999999840-899
Q 003712 81 RDGTSGESIYEGKFPDESPRLKHDRPGLLSMSIADRDTLGSQFIITFKANHSLDRKYVVFGELVQGHEILKKIENV-GDE 159 (801)
Q Consensus 81 ~~g~~gesi~g~~f~dE~~~lkh~~~G~Vsma~~g~~~ngSqFfITL~~~~~LDgk~vVFGkVV~G~eVLekIe~~-~~~ 159 (801)
++|.++++||+..|++|++.++|+.+|+|+||+.++++|++||||||.++++||++|+|||+||+||+||++|+.+ ++.
T Consensus 94 ~~G~gg~siyg~~f~dE~~~l~h~~~G~lsMAn~gp~tngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~ 173 (192)
T 2he9_A 94 GNGKGGESIYGGYFKDENFILKHDRAFLLSMANRGKHTNGSQFFITTKPAPHLDGVHVVFGLVISGFEVIEQIENLKTDA 173 (192)
T ss_dssp SSSSCCCCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCT
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCEEEEEEECHHHHHHHHCCCCCC
T ss_conf 88888876468832674246777997189997689998322799986898645897018999983799999987178698
Q ss_pred CCCCCCCEEEEEEEECCC
Q ss_conf 998213479997465056
Q 003712 160 EGRLTVTVKIINCGEVSE 177 (801)
Q Consensus 160 ~g~P~~~i~I~~~gvl~e 177 (801)
.+.|..+|+|.+|++|..
T Consensus 174 ~~~P~~~v~I~~~g~l~~ 191 (192)
T 2he9_A 174 ASRPYADVRVIDCGVLAT 191 (192)
T ss_dssp TSCBSSCEEEEEEEECC-
T ss_pred CCCCCCCEEEEEEEEECC
T ss_conf 997868869997579836
No 2
>1a58_A Cyclophilin; isomerase, ppiase; 1.95A {Brugia malayi} SCOP: b.62.1.1 PDB: 1a33_A 1c5f_A*
Probab=1.00 E-value=1 Score=352.67 Aligned_cols=176 Identities=52% Similarity=0.831 Sum_probs=168.7
Q ss_pred CCCCCCCEEEEEEEECCCEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEECCCCC
Q ss_conf 98889848999997579033569999769987589999999860688999999988544698489954296233176768
Q 003712 1 MAKKKSLLVFMDVSIDGDPVERMVFELFSDIAPKTAENFRALCTGEKGIGPRTGKPLHYKGSFFHRVIKGSMAEGGDFVK 80 (801)
Q Consensus 1 m~~~~np~V~ldtsiG~~~~GRIvIeLf~d~aP~t~~nFl~Lc~G~~g~g~~~~k~~~Y~Gs~F~Riikg~~iQgGd~~~ 80 (801)
|.+..||+||||+++++.++|+|+||||+++||+||+||++||+|++|++..+++++||+|+.||||+++||||+||++.
T Consensus 1 ~~~~~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~~~~g~~~~Y~g~~FhRvi~~f~iQgGd~~~ 80 (177)
T 1a58_A 1 MSKKDRRRVFLDVTIDGNLAGRIVMELYNDIAPRTCNNFLMLCTGMAGTGKISGKPLHYKGSTFHRVIKNFMIQGGDFTK 80 (177)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBCCCTTCBEEEEETTTEEEECCCSS
T ss_pred CCCCCCCEEEEEEEECCEECEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCCEEEEEECCCEEEECCCCC
T ss_conf 99888968999998899804069999837889668999999735886766456875425798989978997897078668
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEECHHHHHHHHHC-CCC
Q ss_conf 9999887445888889999988888944885125999977337997157988899982799999197999999840-899
Q 003712 81 RDGTSGESIYEGKFPDESPRLKHDRPGLLSMSIADRDTLGSQFIITFKANHSLDRKYVVFGELVQGHEILKKIENV-GDE 159 (801)
Q Consensus 81 ~~g~~gesi~g~~f~dE~~~lkh~~~G~Vsma~~g~~~ngSqFfITL~~~~~LDgk~vVFGkVV~G~eVLekIe~~-~~~ 159 (801)
++|.+++++|+..|.+|++.++|+.+|+|+||+.++++|++||||||.++++||++|+|||+||+||+||++|+.+ ++.
T Consensus 81 ~~g~gg~si~g~~f~dE~~~~~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv~G~dvv~~I~~~~~~~ 160 (177)
T 1a58_A 81 GDGTGGESIYGGMFDDEEFVMKHDEPFVVSMANKGPNTNGSQFFITTTPAPHLNNIHVVFGKVVSGQEVVTKIEYLKTNS 160 (177)
T ss_dssp SSSSCCCCTTSSCBCCCCCCSCCCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCT
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCCEEEEEEEECCHHHHHHHHHCCCCC
T ss_conf 88989875568842575457666888189986689997104899977999766899779999976889999998378798
Q ss_pred CCCCCCCEEEEEEEECC
Q ss_conf 99821347999746505
Q 003712 160 EGRLTVTVKIINCGEVS 176 (801)
Q Consensus 160 ~g~P~~~i~I~~~gvl~ 176 (801)
.+.|..+|+|.+||+|.
T Consensus 161 ~~~P~~~v~I~~~G~l~ 177 (177)
T 1a58_A 161 KNRPLADVVILNCGELV 177 (177)
T ss_dssp TSCBSSCEEEEEEEEEC
T ss_pred CCCCCCCEEEEEEEEEC
T ss_conf 99697886999757889
No 3
>2wfi_A Peptidyl-prolyl CIS-trans isomerase G; phosphoprotein, PRE-mRNA splicing, alternative splicing, nucleus, rotamase, cyclosporin; HET: OCS; 0.75A {Homo sapiens} PDB: 2wfj_A* 2gw2_A
Probab=1.00 E-value=1 Score=350.42 Aligned_cols=175 Identities=51% Similarity=0.858 Sum_probs=167.9
Q ss_pred CCCC-CCCEEEEEEEECCCEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEECCCC
Q ss_conf 9888-984899999757903356999976998758999999986068899999998854469848995429623317676
Q 003712 1 MAKK-KSLLVFMDVSIDGDPVERMVFELFSDIAPKTAENFRALCTGEKGIGPRTGKPLHYKGSFFHRVIKGSMAEGGDFV 79 (801)
Q Consensus 1 m~~~-~np~V~ldtsiG~~~~GRIvIeLf~d~aP~t~~nFl~Lc~G~~g~g~~~~k~~~Y~Gs~F~Riikg~~iQgGd~~ 79 (801)
|.++ .||+||||+.+++..+|+|+||||+++||+||+||++||+|++|++..+++.+||+|+.||||+++||||+||++
T Consensus 3 ~~~~~~~~~vf~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~~Y~g~~FhRvi~~f~iQgGd~~ 82 (179)
T 2wfi_A 3 MGIKVQRPRCFFDIAINNQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVKDFMVQGGDFS 82 (179)
T ss_dssp -----CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETTTEEEECCTT
T ss_pred CCCCCCCCEEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCCEEEEEECCCEEECCCCC
T ss_conf 77678898699999989863317999985788976999999985577676655464772889899998889788716534
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEECHHHHHHHHHC-CC
Q ss_conf 89999887445888889999988888944885125999977337997157988899982799999197999999840-89
Q 003712 80 KRDGTSGESIYEGKFPDESPRLKHDRPGLLSMSIADRDTLGSQFIITFKANHSLDRKYVVFGELVQGHEILKKIENV-GD 158 (801)
Q Consensus 80 ~~~g~~gesi~g~~f~dE~~~lkh~~~G~Vsma~~g~~~ngSqFfITL~~~~~LDgk~vVFGkVV~G~eVLekIe~~-~~ 158 (801)
.++|.++++||+..|++|++.++|+.+|+|+||+.++++|++||||||.++++||++|+|||+||+||+||++|+.+ ++
T Consensus 83 ~~~g~gg~si~g~~f~dE~~~~~h~~~G~lsMAn~gp~tngSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~t~ 162 (179)
T 2wfi_A 83 EGNGRGGESIYGGFFEDESFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIENQKTD 162 (179)
T ss_dssp TSSSSCCCCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTCCBC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCEEEEEEEECCHHHHHHHHCCCCC
T ss_conf 78888887546772356445767688708999768999732589997689964589823899996788999998717879
Q ss_pred CCCCCCCCEEEEEEEEC
Q ss_conf 99982134799974650
Q 003712 159 EEGRLTVTVKIINCGEV 175 (801)
Q Consensus 159 ~~g~P~~~i~I~~~gvl 175 (801)
..+.|..+|+|.+||+|
T Consensus 163 ~~~~P~~~v~I~~~G~l 179 (179)
T 2wfi_A 163 AASKPFAEVRILSCGEL 179 (179)
T ss_dssp TTSCBSSCEEEEEEEEC
T ss_pred CCCCCCCCEEEEECEEC
T ss_conf 89989787599967659
No 4
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=1.00 E-value=1 Score=348.84 Aligned_cols=175 Identities=54% Similarity=0.862 Sum_probs=165.6
Q ss_pred CCEEEEEEEECCCEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEECCCCCCCCCC
Q ss_conf 84899999757903356999976998758999999986068899999998854469848995429623317676899998
Q 003712 6 SLLVFMDVSIDGDPVERMVFELFSDIAPKTAENFRALCTGEKGIGPRTGKPLHYKGSFFHRVIKGSMAEGGDFVKRDGTS 85 (801)
Q Consensus 6 np~V~ldtsiG~~~~GRIvIeLf~d~aP~t~~nFl~Lc~G~~g~g~~~~k~~~Y~Gs~F~Riikg~~iQgGd~~~~~g~~ 85 (801)
+|+|||||++|+.++|+|+||||+++||+||+||+.||+|++|+|...|++.+|+|+.||||+++|||||||++.++|.+
T Consensus 15 ~~~v~~~~~~~~~~~G~i~~~l~~~~~P~t~~nf~~l~~~~~~~~~~~g~~~~y~~~~fhrv~~~f~~q~Gd~~~~~g~g 94 (370)
T 1ihg_A 15 NPRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTG 94 (370)
T ss_dssp SCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTSSBSCCTTCBEEEEETTTEEEECCTTTSSSSC
T ss_pred CCEEEEEEEECCEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEECCCEEEEEECCCEEECCCCCCCCCCC
T ss_conf 97699999779871660899976887826899999972788676766787643679676899779579789989899999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEECHHHHHHHHHCCCCCCCCCC
Q ss_conf 87445888889999988888944885125999977337997157988899982799999197999999840899998213
Q 003712 86 GESIYEGKFPDESPRLKHDRPGLLSMSIADRDTLGSQFIITFKANHSLDRKYVVFGELVQGHEILKKIENVGDEEGRLTV 165 (801)
Q Consensus 86 gesi~g~~f~dE~~~lkh~~~G~Vsma~~g~~~ngSqFfITL~~~~~LDgk~vVFGkVV~G~eVLekIe~~~~~~g~P~~ 165 (801)
|++||+..|.+|++.++|+.+|+|+||+.|+++|++||||||.++++||++|+|||+||+||+||++|+.+....+.|..
T Consensus 95 ~~~~~~~~~~~e~~~~~~~~~g~l~ma~~~~~~~~sqffi~~~~~~~ld~~~~vfG~v~~g~~v~~~i~~~~~~~~~P~~ 174 (370)
T 1ihg_A 95 GESIYGEKFEDENFHYKHDKEGLLSMANAGSNTNGSQFFITTVPTPHLDGKHVVFGQVIKGMGVAKILENVEVKGEKPAK 174 (370)
T ss_dssp CCBTTBSCBCCCCCCBCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCEETTEESS
T ss_pred CCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCEEEEEEECCHHHHHHHHCCCCCCCCCCE
T ss_conf 99888998688767767899708998157999877659996788711279823899996577999999717877885102
Q ss_pred CEEEEEEEECCCCCC
Q ss_conf 479997465056521
Q 003712 166 TVKIINCGEVSEDKK 180 (801)
Q Consensus 166 ~i~I~~~gvl~e~~k 180 (801)
+|+|.+|+++.+...
T Consensus 175 ~v~I~~~g~l~~~~~ 189 (370)
T 1ihg_A 175 LCVIAECGELKEGDD 189 (370)
T ss_dssp CEEEEEEEEECTTCC
T ss_pred EEEEEEEEEECCCCC
T ss_conf 689898778626763
No 5
>1z81_A Cyclophilin; structural genomics, structural genomics consortium, SGC, isomerase; 2.80A {Plasmodium yoelii yoelii} SCOP: b.62.1.1
Probab=1.00 E-value=1 Score=343.29 Aligned_cols=172 Identities=43% Similarity=0.744 Sum_probs=161.7
Q ss_pred CCCCCCCEEEEEEEECCCEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEECCCCC
Q ss_conf 98889848999997579033569999769987589999999860688999999988544698489954296233176768
Q 003712 1 MAKKKSLLVFMDVSIDGDPVERMVFELFSDIAPKTAENFRALCTGEKGIGPRTGKPLHYKGSFFHRVIKGSMAEGGDFVK 80 (801)
Q Consensus 1 m~~~~np~V~ldtsiG~~~~GRIvIeLf~d~aP~t~~nFl~Lc~G~~g~g~~~~k~~~Y~Gs~F~Riikg~~iQgGd~~~ 80 (801)
|.+..|++|||||++++.++|+|+||||+++||+||+||++||+++++.+ +++.+|+|+.||||+++||||+||++.
T Consensus 54 ~~~~~~~~V~~disi~~t~~G~I~ieL~~d~aP~tv~NF~~L~~~~~g~~---g~~~~Y~gt~FHRVi~~FmiQgGD~~~ 130 (229)
T 1z81_A 54 LTNPSNPVVFMDINLGNNFLGKFKFELFQNIVPKTSENFRQFCTGEYKVN---NLPVGYKNTIFHRVIKEFMIQGGDFIN 130 (229)
T ss_dssp SSSTTCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCBSS---SSBCSSTTEECCEEETTTEEEECCTTT
T ss_pred CCCCCCCEEEEEEEECCEECCCEEEEECCCCCCHHHHHHHHHHHCCCCCC---CCCCEECCCEEEEEECCCEEECCCCCC
T ss_conf 46899957999985798435648999818989779999999960888876---777548898999996897898388767
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEE--ECHHHHHHHHHC-C
Q ss_conf 9999887445888889999988888944885125999977337997157988899982799999--197999999840-8
Q 003712 81 RDGTSGESIYEGKFPDESPRLKHDRPGLLSMSIADRDTLGSQFIITFKANHSLDRKYVVFGELV--QGHEILKKIENV-G 157 (801)
Q Consensus 81 ~~g~~gesi~g~~f~dE~~~lkh~~~G~Vsma~~g~~~ngSqFfITL~~~~~LDgk~vVFGkVV--~G~eVLekIe~~-~ 157 (801)
++|.++++||+..|.+|++.|+|+.+|+|+||+.++++|++||||||.++++||++|+|||+|| +||+||++|+.+ +
T Consensus 131 g~G~Gg~siyg~~f~dE~~~l~h~~~G~LsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~~eGmdVv~~I~~~~t 210 (229)
T 1z81_A 131 HNGSGSLSIYGEKFDDENFDIKHDKEGLLSMANSGPNTNGCQFFITTKKCEWLDGKNVVFGRIIDNDSLLLLKKIENVSV 210 (229)
T ss_dssp SSSCCCCBTTBSCCCCCCCCSCCCSTTEEEECCSSSSCCCSCEEEESSCCGGGBTTBCEEEEECSHHHHHHHHHHHHSCB
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEEECCCHHHHHHHHHCCC
T ss_conf 89988776678832553456555787289866579998134799978998545897208999995674899999981787
Q ss_pred CCC-CCCCCCEEEEEEEEC
Q ss_conf 999-982134799974650
Q 003712 158 DEE-GRLTVTVKIINCGEV 175 (801)
Q Consensus 158 ~~~-g~P~~~i~I~~~gvl 175 (801)
+.. ++|..+|+|.+||+|
T Consensus 211 ~~~~~~P~~~V~I~~cG~l 229 (229)
T 1z81_A 211 TPYIYKPKIPINVVECGEL 229 (229)
T ss_dssp CTTTCCBSSCEEEEEEEEC
T ss_pred CCCCCCCCCCEEEEECEEC
T ss_conf 7779977798699957219
No 6
>2poy_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, isomerase, S genomics, structural genomics consortium; HET: BMT; 1.80A {Cryptosporidium parvum iowa II} PDB: 2plu_A*
Probab=1.00 E-value=1 Score=341.94 Aligned_cols=173 Identities=51% Similarity=0.801 Sum_probs=164.0
Q ss_pred CCCCCCCEEEEEEEECCCEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEECCCCC
Q ss_conf 98889848999997579033569999769987589999999860688999999988544698489954296233176768
Q 003712 1 MAKKKSLLVFMDVSIDGDPVERMVFELFSDIAPKTAENFRALCTGEKGIGPRTGKPLHYKGSFFHRVIKGSMAEGGDFVK 80 (801)
Q Consensus 1 m~~~~np~V~ldtsiG~~~~GRIvIeLf~d~aP~t~~nFl~Lc~G~~g~g~~~~k~~~Y~Gs~F~Riikg~~iQgGd~~~ 80 (801)
+....+|+|||||++++.++|+|+||||+++||+||+||++||+|++|.+. .+++++|+|+.||||+++||||+||++.
T Consensus 14 ~~~~~~~~v~~di~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~-~~~~~~Y~g~~FhRVi~~f~iQgGd~~~ 92 (186)
T 2poy_A 14 LYFQGNPVVYFDISIGQTPAGRITMELFADKVPITAENFRALCTGEKGMGQ-SGKPLCYTGSFFHRIIPQFMIQGGDFTR 92 (186)
T ss_dssp ----CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCT-TSSBSCCTTCBCCEEETTTEEEECCTTT
T ss_pred CCCCCCCEEEEEEEECCEECCCEEEEEECCCCCHHHHHHHHHHCCCCCCCC-CCCCCEECCCEEEEEECCCEEEECCCCC
T ss_conf 455789879999868987466389998078896799999998536677566-6765438898999994798999599878
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEECHHHHHHHHHCCCCC
Q ss_conf 99998874458888899999888889448851259999773379971579888999827999991979999998408999
Q 003712 81 RDGTSGESIYEGKFPDESPRLKHDRPGLLSMSIADRDTLGSQFIITFKANHSLDRKYVVFGELVQGHEILKKIENVGDEE 160 (801)
Q Consensus 81 ~~g~~gesi~g~~f~dE~~~lkh~~~G~Vsma~~g~~~ngSqFfITL~~~~~LDgk~vVFGkVV~G~eVLekIe~~~~~~ 160 (801)
++|.++++||+..|++|++.|+|+.+|+|+||+.++++|++||||||.++++||++|+|||+||+||+||++|+.+...+
T Consensus 93 ~~G~gg~si~g~~f~dE~~~l~h~~~G~lsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~ 172 (186)
T 2poy_A 93 GDGTGGESIYGSKFRDENFVYTHDAPFLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGKVLEGMEVVKSIEKCGSQN 172 (186)
T ss_dssp SSSSCCCCTTC-CBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHTCCTT
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCEEEEEEEECCHHHHHHHHHCCCCC
T ss_conf 88888876588722475556566887689984389998643799987898545897118999966789999997088989
Q ss_pred CCCCCCEEEEEEEE
Q ss_conf 98213479997465
Q 003712 161 GRLTVTVKIINCGE 174 (801)
Q Consensus 161 g~P~~~i~I~~~gv 174 (801)
+.|..+|+|.+||+
T Consensus 173 ~~P~~~v~I~~cG~ 186 (186)
T 2poy_A 173 GKPTKSVCITASGV 186 (186)
T ss_dssp SCCSSCEEEEEEEC
T ss_pred CCCCCCEEEEECCC
T ss_conf 88878879996889
No 7
>2igv_A Peptidyl-prolyl CIS-trans isomerase 3; rotamase; 1.67A {Caenorhabditis elegans} SCOP: b.62.1.1 PDB: 1e3b_A 1e8k_A 1dyw_A 2igw_A 2hqj_A
Probab=1.00 E-value=1 Score=340.99 Aligned_cols=171 Identities=49% Similarity=0.858 Sum_probs=162.7
Q ss_pred CCCEEEEEEEECCCEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEECCCCCCCCC
Q ss_conf 98489999975790335699997699875899999998606889999999885446984899542962331767689999
Q 003712 5 KSLLVFMDVSIDGDPVERMVFELFSDIAPKTAENFRALCTGEKGIGPRTGKPLHYKGSFFHRVIKGSMAEGGDFVKRDGT 84 (801)
Q Consensus 5 ~np~V~ldtsiG~~~~GRIvIeLf~d~aP~t~~nFl~Lc~G~~g~g~~~~k~~~Y~Gs~F~Riikg~~iQgGd~~~~~g~ 84 (801)
.||+|||||++++.++|+|+||||.++||+||+||++||++++|++. .++++||+|+.||||+++||||+||++.++|.
T Consensus 2 ~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~g~-~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G~ 80 (173)
T 2igv_A 2 SRSKVFFDITIGGKASGRIVMELYDDVVPKTAGNFRALCTGENGIGK-SGKPLHFKGSKFHRIIPNFMIQGGDFTRGNGT 80 (173)
T ss_dssp CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCT-TSSBSCCTTCBCCEEETTTEEEECCTTTSSSS
T ss_pred CCCEEEEEEEECCEECCEEEEEEECCCCCHHHHHHHHHHCCCCCCCC-CCCCCEECCCEEEEEECCCEEECCCCCCCCCC
T ss_conf 88889999978998464199999078894799999998657878776-67666588989999978978983887788888
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEECHHHHHHHHHCCCCCCCCC
Q ss_conf 88744588888999998888894488512599997733799715798889998279999919799999984089999821
Q 003712 85 SGESIYEGKFPDESPRLKHDRPGLLSMSIADRDTLGSQFIITFKANHSLDRKYVVFGELVQGHEILKKIENVGDEEGRLT 164 (801)
Q Consensus 85 ~gesi~g~~f~dE~~~lkh~~~G~Vsma~~g~~~ngSqFfITL~~~~~LDgk~vVFGkVV~G~eVLekIe~~~~~~g~P~ 164 (801)
++++||+..|.+|++.|+|+.+|+|+||+.++++|++||||||.++++||++|+|||+||+||+||++|+.+.+.++.|.
T Consensus 81 gg~siyg~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~vFG~Vv~G~dvv~~I~~~~t~~~~P~ 160 (173)
T 2igv_A 81 GGESIYGEKFPDENFKEKHTGPGVLSMANAGPNTNGSQFFLCTVKTEWLDGKHVVFGRVVEGLDVVKAVESNGSQSGKPV 160 (173)
T ss_dssp CCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTSCCS
T ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCEEEEEEEECCHHHHHHHHHCCCCCCCCC
T ss_conf 98855788316744565778972999855899984208999868753248972599999658899999972788799887
Q ss_pred CCEEEEEEEECC
Q ss_conf 347999746505
Q 003712 165 VTVKIINCGEVS 176 (801)
Q Consensus 165 ~~i~I~~~gvl~ 176 (801)
.+|+|.+||+|.
T Consensus 161 ~~v~I~~~g~l~ 172 (173)
T 2igv_A 161 KDCMIADCGQLK 172 (173)
T ss_dssp SCEEEEEEEEEC
T ss_pred CCEEEEEEEEEC
T ss_conf 877999968873
No 8
>1mzw_A Cyclophilin H, U-snRNP-ASSOCIATED cyclophilin; cyclophilin, peptidyl-prolyl-CIS/trans isomerase, spliceosome, U4/U6-60K protein, WD protein; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1qoi_A
Probab=1.00 E-value=1 Score=337.98 Aligned_cols=171 Identities=50% Similarity=0.804 Sum_probs=161.4
Q ss_pred CCCCCCEEEEEEEECCCEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEECCCCCC
Q ss_conf 88898489999975790335699997699875899999998606889999999885446984899542962331767689
Q 003712 2 AKKKSLLVFMDVSIDGDPVERMVFELFSDIAPKTAENFRALCTGEKGIGPRTGKPLHYKGSFFHRVIKGSMAEGGDFVKR 81 (801)
Q Consensus 2 ~~~~np~V~ldtsiG~~~~GRIvIeLf~d~aP~t~~nFl~Lc~G~~g~g~~~~k~~~Y~Gs~F~Riikg~~iQgGd~~~~ 81 (801)
.+..+|+|||||++++..+|+|+||||+++||+||+||++||++++|. .+++.+|+|+.||||+++||||+||+..+
T Consensus 6 ~~~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~---~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~ 82 (177)
T 1mzw_A 6 SSPVNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGEFRK---DGVPIGYKGSTFHRVIKDFMIQGGDFVNG 82 (177)
T ss_dssp CCCCCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCEE---TTEECSSTTCBCCEEETTTEEEECCTTTS
T ss_pred CCCCCCEEEEEEEECCEECEEEEEEECCCCCCHHHHHHHHHHHCCCCC---CCCCCEECCCEEEEEECCCEEECCCCCCC
T ss_conf 689997799999789840325999981898967999999997345677---67664088989999978988984886568
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEECHHHHHHHHHC-CCCC
Q ss_conf 999887445888889999988888944885125999977337997157988899982799999197999999840-8999
Q 003712 82 DGTSGESIYEGKFPDESPRLKHDRPGLLSMSIADRDTLGSQFIITFKANHSLDRKYVVFGELVQGHEILKKIENV-GDEE 160 (801)
Q Consensus 82 ~g~~gesi~g~~f~dE~~~lkh~~~G~Vsma~~g~~~ngSqFfITL~~~~~LDgk~vVFGkVV~G~eVLekIe~~-~~~~ 160 (801)
+|.++++||+..|++|++.|+|+.+|+|+||+.++++|++||||||.++++||++|+|||+||+||+||++|+.+ ++.+
T Consensus 83 ~G~gg~si~g~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv~G~dvv~~I~~~~t~~~ 162 (177)
T 1mzw_A 83 DGTGVASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHVVFGKIIDGLLVMRKIENVPTGPN 162 (177)
T ss_dssp SSCCCCCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCGG
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEECCHHHHHHHHHCCCCCC
T ss_conf 88888765787246744565658888999734899982038999779998668982499998678899999970882999
Q ss_pred CCCCCCEEEEEEEEC
Q ss_conf 982134799974650
Q 003712 161 GRLTVTVKIINCGEV 175 (801)
Q Consensus 161 g~P~~~i~I~~~gvl 175 (801)
+.|..+|+|.+||+|
T Consensus 163 ~~P~~~v~I~~cG~l 177 (177)
T 1mzw_A 163 NKPKLPVVISQCGEM 177 (177)
T ss_dssp GCBSSCEEEEEEEEC
T ss_pred CCCCCCEEEEECEEC
T ss_conf 978788799966629
No 9
>1qng_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, cyclophilin-cyclosporin complex, immunosuppressant, cyclophilin; HET: BMT; 2.1A {Plasmodium falciparum} SCOP: b.62.1.1 PDB: 1qnh_A*
Probab=1.00 E-value=1 Score=335.48 Aligned_cols=169 Identities=50% Similarity=0.855 Sum_probs=159.4
Q ss_pred CCCEEEEEEEECCCEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEECCCCCCCCC
Q ss_conf 98489999975790335699997699875899999998606889999999885446984899542962331767689999
Q 003712 5 KSLLVFMDVSIDGDPVERMVFELFSDIAPKTAENFRALCTGEKGIGPRTGKPLHYKGSFFHRVIKGSMAEGGDFVKRDGT 84 (801)
Q Consensus 5 ~np~V~ldtsiG~~~~GRIvIeLf~d~aP~t~~nFl~Lc~G~~g~g~~~~k~~~Y~Gs~F~Riikg~~iQgGd~~~~~g~ 84 (801)
.||+|||||++++.++|+|+||||+++||+||+||++||+|+ |.+ ..+++++|+|+.||||+++||||+||++.++|.
T Consensus 2 ~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~-g~g-~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~ 79 (170)
T 1qng_A 2 KRSKVFFDISIDNSNAGRIIFELFSDITPRTCENFRALCTGE-KIG-SRGKNLHYKNSIFHRIIPQFMCQGGDITNGNGS 79 (170)
T ss_dssp CSCEEEEEEEESSSEEEEEEEEECTTTCHHHHHHHHHHHHTC-EEC-TTSSEECCTTCBCCEEETTTEEEECCTTTSSSS
T ss_pred CCCEEEEEEEECCEECEEEEEEECCCCCCHHHHHHHHHHCCC-CCC-CCCCCCEECCCEEEEEECCCEEECCCCCCCCCC
T ss_conf 987899998589983303999985888977999999985568-867-657654288979999978978974886678898
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEECHHHHHHHHHCCCCCCCCC
Q ss_conf 88744588888999998888894488512599997733799715798889998279999919799999984089999821
Q 003712 85 SGESIYEGKFPDESPRLKHDRPGLLSMSIADRDTLGSQFIITFKANHSLDRKYVVFGELVQGHEILKKIENVGDEEGRLT 164 (801)
Q Consensus 85 ~gesi~g~~f~dE~~~lkh~~~G~Vsma~~g~~~ngSqFfITL~~~~~LDgk~vVFGkVV~G~eVLekIe~~~~~~g~P~ 164 (801)
++++||+..|++|++.++|+.+|+|+||+.++++|++||||||.++++||++|+|||+||+||+||++|+.+...++.|.
T Consensus 80 gg~si~g~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~Ldg~~~vFG~Vv~G~dvv~~I~~~~t~~~~P~ 159 (170)
T 1qng_A 80 GGESIYGRSFTDENFNMKHDQPGLLSMANAGPNTNSSQFFITLVPCPWLDGKHVVFGKVIEGMNVVREMEKEGAKSGYVK 159 (170)
T ss_dssp CCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTCCCS
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCEEEEEEEECCHHHHHHHHHCCCCCCCCC
T ss_conf 88653677346533445668788899865699984437999888996448971189999787999999972788799777
Q ss_pred CCEEEEEEEEC
Q ss_conf 34799974650
Q 003712 165 VTVKIINCGEV 175 (801)
Q Consensus 165 ~~i~I~~~gvl 175 (801)
.+|+|.+||+|
T Consensus 160 ~~v~I~~cG~l 170 (170)
T 1qng_A 160 RSVVITDCGEL 170 (170)
T ss_dssp SCEEEEEEEEC
T ss_pred CCEEEEECEEC
T ss_conf 98699956409
No 10
>3rdd_A Peptidyl-prolyl CIS-trans isomerase A; beta barrel, cytosolic, inhibito isomerase-isomerase inhibitor complex; HET: EA4; 2.14A {Homo sapiens}
Probab=1.00 E-value=1 Score=330.60 Aligned_cols=165 Identities=50% Similarity=0.861 Sum_probs=157.4
Q ss_pred CCCCEEEEEEEECCCEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEECCCCCCCC
Q ss_conf 89848999997579033569999769987589999999860688999999988544698489954296233176768999
Q 003712 4 KKSLLVFMDVSIDGDPVERMVFELFSDIAPKTAENFRALCTGEKGIGPRTGKPLHYKGSFFHRVIKGSMAEGGDFVKRDG 83 (801)
Q Consensus 4 ~~np~V~ldtsiG~~~~GRIvIeLf~d~aP~t~~nFl~Lc~G~~g~g~~~~k~~~Y~Gs~F~Riikg~~iQgGd~~~~~g 83 (801)
..||+|||||++++.++|+|+||||+++||+||+||++||++++|++ |+|+.||||+++|||||||+..++|
T Consensus 20 ~~~p~v~~di~i~~~~~G~I~ieL~~~~aP~t~~NF~~L~~~~~g~~--------Y~g~~FhRvi~~f~iQgGd~~~~~g 91 (184)
T 3rdd_A 20 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG--------YKGSCFHRIIPGFMCQGGDFTRHNG 91 (184)
T ss_dssp -CCCEEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTTSCS--------STTCBCCEEETTTEEEECCTTTSSS
T ss_pred CCCCEEEEEEEECCEEEEEEEEEEECCCCCHHHHHHHHHHCCCCCCC--------CCCCEEEECCCCCEEEECCCCCCCC
T ss_conf 78988999996899760479999908888089999999844376754--------0798989814884999699888888
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEECHHHHHHHHHCCCCCCCC
Q ss_conf 98874458888899999888889448851259999773379971579888999827999991979999998408999982
Q 003712 84 TSGESIYEGKFPDESPRLKHDRPGLLSMSIADRDTLGSQFIITFKANHSLDRKYVVFGELVQGHEILKKIENVGDEEGRL 163 (801)
Q Consensus 84 ~~gesi~g~~f~dE~~~lkh~~~G~Vsma~~g~~~ngSqFfITL~~~~~LDgk~vVFGkVV~G~eVLekIe~~~~~~g~P 163 (801)
.+++.+|+..|.+|++.++|+.+|+|+||+.++++|++||||||.++++||++|+|||+||+||+||++|+.+.+.++.|
T Consensus 92 ~gg~si~g~~~~de~~~l~h~~~G~lsmA~~gp~s~gSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~~g~P 171 (184)
T 3rdd_A 92 TGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKT 171 (184)
T ss_dssp SCCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTSCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCCC
T ss_conf 79866578743686555466887299997689998331899991796343899209999925999999998458889989
Q ss_pred CCCEEEEEEEECC
Q ss_conf 1347999746505
Q 003712 164 TVTVKIINCGEVS 176 (801)
Q Consensus 164 ~~~i~I~~~gvl~ 176 (801)
..+|+|.+||+|.
T Consensus 172 ~~~v~I~~cG~l~ 184 (184)
T 3rdd_A 172 SKKITIADCGQLE 184 (184)
T ss_dssp SSCEEEEEEEECC
T ss_pred CCCEEEEECEEEC
T ss_conf 5776998573789
Done!