Query 003713
Match_columns 801
No_of_seqs 232 out of 1785
Neff 5.9
Searched_HMMs 29240
Date Tue Mar 26 19:07:08 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/003713.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1760-1763//hhsearch_pdb/003713hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2cg9_A ATP-dependent molecular 1.0 1 1 1402.2 48.1 656 95-762 3-677 (677)
2 2o1u_A Endoplasmin; GRP94, HSP 1.0 1 1 1297.4 58.3 635 94-767 21-665 (666)
3 2ioq_A Chaperone protein HTPG; 1.0 1 1 1248.9 49.4 613 95-758 4-623 (624)
4 1y4s_A Chaperone protein HTPG; 1.0 1 1 1124.3 35.4 548 95-683 4-558 (559)
5 3q6m_A Heat shock protein HSP 1.0 1 1 1007.2 37.4 442 355-800 2-446 (448)
6 3hjc_A Heat shock protein 83-1 1.0 1 1 985.7 38.7 415 348-766 11-427 (444)
7 2cge_A ATP-dependent molecular 1.0 1 1 938.3 41.6 402 356-762 1-405 (405)
8 1hk7_A Heat shock protein HSP8 1.0 1 1 700.7 25.0 286 356-646 1-288 (288)
9 2gq0_A Chaperone protein HTPG; 1.0 1 1 697.3 22.4 290 356-667 2-295 (303)
10 3pry_A Heat shock protein HSP 1.0 1 1 666.5 23.8 264 354-621 1-264 (268)
No 1
>2cg9_A ATP-dependent molecular chaperone HSP82; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=1.00 E-value=1 Score=1402.22 Aligned_cols=656 Identities=44% Similarity=0.775 Sum_probs=593.3
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCC
Q ss_conf 65322110088999998864999953789997870996989887311579643468987309999818995899995899
Q 003713 95 LEKYEYQAEVSRLMDLIVNSLYSNKEVFLRELISNASDALDKLRYLGVTEPELLKDAVDLDIRIQTDKDNGIITITDSGI 174 (801)
Q Consensus 95 ~e~~~F~~e~~~ll~ll~~~LYs~~~vfLRELIqNA~DA~~k~r~~~~~~~~~~~~~~~~~I~I~~d~~~~~l~I~DNGi 174 (801)
.|++.||+|+++||+||+++||||+++|||||||||+||++++||+++++|+.+....++.|+|.+++++++|+|+|||+
T Consensus 3 ~e~~~Fqae~~~Ll~li~~sLYsnkeifLRELIsNA~DA~~k~r~~~ltd~~~~~~~~~~~I~I~~d~~~~~I~I~DnGi 82 (677)
T 2cg9_A 3 SETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQLETEPDLFIRITPKPEQKVLEIRDSGI 82 (677)
T ss_dssp CEEEECCCCHHHHHHHHHHSCCSCTTHHHHHHHHHHHHHHHHHHHHTSSCTTTTTTCCCCCEEEEEEGGGTEEEEEECSC
T ss_pred CCCEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHCCCHHHCCCCCCCEEEEEEECCCCEEEEEECCC
T ss_conf 64343313399999998873779815879888538999999888875269132067877289999938978899997898
Q ss_pred CCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEEECCCCCCCEEEEEECCCCCE
Q ss_conf 89999899999998501416479986303457999963345441122201125868999811899971899983699725
Q 003713 175 GMTQQDLVDCLGTIAQSGTAKFLKAMKDSKDAGGDSNLIGQFGVGFYSAFLVSDRVVVETKSPKSDKQYVWEGEANASSY 254 (801)
Q Consensus 175 GMt~eel~~~l~tIa~Sg~~~f~~~~~~~~~~~~~~~~IGqFGIGf~S~F~vadkV~V~Tk~~~~~~~~~w~s~~~~~~y 254 (801)
|||+++|..+|++||+||++.|+++++.+ .+...||||||||||+||||++|+|+||+.+ +.++.|+++|+ +.|
T Consensus 83 GMt~edl~~~l~tIA~Sgt~~f~~kl~~~----~d~~~IGqFGvGFySaf~vadkV~V~Sk~~~-~~~~~W~s~g~-~~~ 156 (677)
T 2cg9_A 83 GMTKAELINNLGTIAKSGTKAFMEALSAG----ADVSMIGQFGVGFYSLFLVADRVQVISKSND-DEQYIWESNAG-GSF 156 (677)
T ss_dssp CCCHHHHHGGGSSSSSCTTHHHHSCCCSS----CCCCCCCCTTCTTGGGGGTEEEEEEEEECTT-SCEEEEEECSS-SEE
T ss_pred CCCHHHHHHHHHHHHCCCCHHHHHHHHCC----CCHHHCCCCCCHHHHHHHCCCEEEEEECCCC-CCEEEEEECCC-CEE
T ss_conf 98999999998767035627788863122----4344417877126877515767899972699-85699998599-647
Q ss_pred EEEECCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCC---------CC
Q ss_conf 999517998778996489999637975679978899999974167876738601356321235788833---------44
Q 003713 255 TIREETNPEKLLPRGTRLTLYLKHDDKGFAHPERIQKLVKNYSQFVSFPIYTWQEKGYTKEVEVDEDPA---------ET 325 (801)
Q Consensus 255 ~I~~~~~~~~~~~~GT~I~L~Lk~~~~e~l~~~~i~~likkys~fi~~PI~~~~~~~~~~~~~~~~~~~---------~~ 325 (801)
+|.++..+ ....+||+|+|||++++.+|++.++|+++|++||+|++|||+++.++..+++++++++++ ++
T Consensus 157 ti~~~~~~-~~~~~GT~I~L~Lk~d~~e~l~~~~i~~lvkkys~fi~~PI~l~~~k~~~~~~~~~e~~~~~~~~~~e~~~ 235 (677)
T 2cg9_A 157 TVTLDEVN-ERIGRGTILRLFLKDDQLEYLEEKRIKEVIKRHSEFVAYPIQLVVTKEVEKEVPIPEEEKKDEEKKDEEKK 235 (677)
T ss_dssp EEEECCSS-CCCSSEEEEEEEECTTGGGGGCHHHHHHHHHHHSTTCSSCEEECCCCCCCCC-------------------
T ss_pred EEEECCCC-CCCCCCEEEEEEECCHHHCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHCCCCCCCCCCC
T ss_conf 98656777-88899708999975500023669999999999986089886986403115676863122101122112333
Q ss_pred -------CCCCHHHHHHHHHCCCCEEECCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCC
Q ss_conf -------5562016898530123112003431002468988325999999899999999970689998402321025530
Q 003713 326 -------NKDKQDETAEKKKKTKTVVERYWDWELTNETQPIWLRNPKEVTTEEYNEFYKKTFNEYLDPLASSHFTTEGEV 398 (801)
Q Consensus 326 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~plW~r~~~~v~~eey~~fyk~~~~~~~~pl~~~h~~~eg~~ 398 (801)
++++..++++++++++++++++++|+.||+++|||+|+|.+|++|||.+|||+++++|++||+|+||++||++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~e~e~iN~~~plW~r~~~eit~eeY~~FYk~l~~d~~~pl~~~H~~veg~~ 315 (677)
T 2cg9_A 236 DEDDKKPKLEEVDEEEEKKPKTKKVKEEVQEIEELNKTKPLWTRNPSDITQEEYNAFYKSISNDWEDPLYVKHFSVEGQL 315 (677)
T ss_dssp --------------------------CCCCCBCCCCCCCCTTSSCGGGCCTTTHHHHHHHHTTCCSCCSEEEEEEECSSS
T ss_pred CCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHEEEECCCCCC
T ss_conf 22222343234441011012433333234321002568787336823178999999999763897785215775035661
Q ss_pred EEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHCCCHHHHHHH
Q ss_conf 13799984089999976556787768189964477404899897721223400363189999863677640459999999
Q 003713 399 EFRSILYVPAVAPMGKDDLINPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSNDLPLNVSREILQESRIVRIMR 478 (801)
Q Consensus 399 ~~~~llyiP~~~p~~~~~~~~~~~~~i~LYv~rVfI~d~~~~~llP~~l~FvkGVVDS~DLpLNvSRE~LQ~~~~l~~I~ 478 (801)
+|+||||||+++|+++|+. ...+++|+||||||||+|+|+ +|||+||+||||||||+|||||||||+||+|+++++|+
T Consensus 316 ~~~~lLyiP~~ap~d~~~~-~~~~~~ikLYv~rVfI~d~~~-~llP~yL~FvkGVVDS~DLpLNvSRE~LQ~~~~lk~I~ 393 (677)
T 2cg9_A 316 EFRAILFIPKRAPFDLFES-KKKKNNIKLYVRRVFITDEAE-DLIPEWLSFVKGVVDSEDLPLNLSREMLQQNKIMKVIR 393 (677)
T ss_dssp CEEEEEEECSSCCC----------CCSEEEETTEEEEECST-TTSCGGGTTCEEEEEESSCCCCBTTTBCCCHHHHHHHH
T ss_pred EEEEEEEECCCCCHHHHHH-HHCCCCEEEEEEEEEEECCHH-HHCHHHHHHHEEECCCCCCCCCCCHHHHCCCHHHHHHH
T ss_conf 5899999738893333321-201578179983038306725-55637887765650247778645788864689999999
Q ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCEEECCCCCCCCCHHHHHHHCCCCCCCE
Q ss_conf 99999999999965203796889999999968852314578217310048311021358994116878886048899609
Q 003713 479 KRLVRKAFDMILGISMSENRADYEKFWENFGKYLKMGCIDDRENHKPLAPLLRFFSSQSEDEMISLDEYVENMKPEQKDI 558 (801)
Q Consensus 479 k~i~~ki~~~l~~la~~~d~e~y~~f~~~fg~~lK~G~~eD~~n~e~i~~LLrF~Ss~~~~~~~SL~eYv~rmke~Qk~I 558 (801)
++|++|++++|.+|++ |+++|++||++||.+||+|+++|..|+++|++||||+||+++++++||+||++||+++|+.|
T Consensus 394 ~~l~kkvl~~l~~la~--~~e~y~~f~~~fg~~lK~G~~eD~~nr~~l~~llrf~ss~~~~~~~sL~eYv~rmke~Q~~I 471 (677)
T 2cg9_A 394 KNIVKKLIEAFNEIAE--DSEQFEKFYSAFSKNIKLGVHEDTQNRAALAKLLRYNSTKSVDELTSLTDYVTRMPEHQKNI 471 (677)
T ss_dssp HHHHHHHHHHHHHHHS--CSHHHHHHHHHHHHHHHHHHHHCSSSHHHHHTTCCBEESSCTTSCBCSTTHHHHSCTTCCEE
T ss_pred HHHHHHHHHHHHHHHH--CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEEECCCCCCEEEHHHHHHHCCCCCCEE
T ss_conf 9999999999999876--99999999999857766422138878999986337623278885251999987463557559
Q ss_pred EEEECCCHHHHHCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCHHHH--HHHHHHHHHH
Q ss_conf 99926899899538669997417946999459862899997631069735762255457687716778--8636879879
Q 003713 559 YFIAADSVASARNTPFLEKLLEKDLEVLYLVDPIDEIAVQNLKSYKEKNFVDISKEDLDLGEKNEEKE--KVMKEEFGQT 636 (801)
Q Consensus 559 YY~~~~s~~~~~~sp~~E~~~~kg~eVL~l~dpiDE~~l~~L~~f~gk~fvsV~k~~l~l~~~~e~~~--~~~~~ef~~L 636 (801)
||++|+|++++++|||+|.|+++|||||||++||||||+++|.+|+|++|++|+++ ++|++.+++++ ++.++++++|
T Consensus 472 yY~t~~s~~~~~~sp~~E~~~~kg~EVl~l~~~iDe~~~~~l~e~~gk~~~~v~k~-l~l~~~e~~~~~~~~~~~~~~~L 550 (677)
T 2cg9_A 472 YYITGESLKAVEKSPFLDALKAKNFEVLFLTDPIDEYAFTQLKEFEGKTLVDITKD-FELEETDEEKAEREKEIKEYEPL 550 (677)
T ss_dssp EEEECSCSTTTTTCGGGHHHHTTTCCEEEECSHHHHHHHGGGSCBTTBEEECSCCC-CCSCSSTTSSTTHHHHHGGGHHH
T ss_pred EEEECCCHHHHHHCCHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECC-CCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 99968888998719078889857956998278238999999998379438982034-56541013334456667789999
Q ss_pred HHHHHHHHCCCEEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHC
Q ss_conf 99999770895059981025889975998168785099999999840499984222478714998899957899896301
Q 003713 637 CDWIKKRLGDKVASVQISNRLSSSPCVLVSAKFGWSANMERLMKAQTVGDTSSMEFMRGRRVFEINPEHPIIQNLNAASK 716 (801)
Q Consensus 637 ~~~lKe~Lg~kV~~V~vS~RL~ssP~~iv~~e~g~s~~Merimkaq~~~~~~~~~~~~~k~vLEINp~HPLIk~L~~~~~ 716 (801)
|+|+|+.|+++|.+|++|+||++||||+|++++|||++|+|||++|++++++++++|..+++|||||+||||++|..+..
T Consensus 551 ~~~~k~~L~~~v~~V~~s~rl~~sP~~lv~~~~~~s~~merimka~~~~d~~~~~~~~~k~~LeiNp~hpli~~L~~~~~ 630 (677)
T 2cg9_A 551 TKALKEILGDQVEKVVVSYKLLDAPAAIRTGQFGWSANMERIMKAQALRDSSMSSYMSSKKTFEISPKSPIIKELKKRVD 630 (677)
T ss_dssp HHHHHHTTCSSCSCEECCSSCSSSCEEEECCTTSCCHHHHHHHTTCC-------------CEEEECTTCHHHHHHHHHHH
T ss_pred HHHHHHHCCCCCEEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHH
T ss_conf 99999860776308998324789978999476664579999999864435542113444705898589989999998643
Q ss_pred CC-CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC
Q ss_conf 89-99457999999999999982999998989999999999972039
Q 003713 717 NC-PDDNDALRVVDLLYDAALVSSGFTPENPAELGSKIYEMLGMNLQ 762 (801)
Q Consensus 717 ~d-~~d~~~~~~a~lLyd~AlLs~G~~leDp~~f~~ri~~ll~~~L~ 762 (801)
.| ++++.++++|++|||+|+|++|++++||+.|++|+|+||.++|+
T Consensus 631 ~d~~~~~~~~~~~~~Lyd~All~~G~~l~dp~~f~~ri~~ll~~~l~ 677 (677)
T 2cg9_A 631 EGGAQDKTVKDLTKLLYETALLTSGFSLDEPTSFASRINRLISLGLN 677 (677)
T ss_dssp TCCSSCSSSSTTHHHHHHHHHHHTTCCCSSTTHHHHHHHHTSSSSCC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 14468799999999999988986899830799999999999998639
No 2
>2o1u_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, AMP-PNP, GP96; HET: ANP; 2.40A {Canis lupus familiaris} PDB: 2o1v_A* 2o1w_A 2o1t_A
Probab=1.00 E-value=1 Score=1297.44 Aligned_cols=635 Identities=46% Similarity=0.830 Sum_probs=583.8
Q ss_pred CCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECC
Q ss_conf 96532211008899999886499995378999787099698988731157964346898730999981899589999589
Q 003713 94 PLEKYEYQAEVSRLMDLIVNSLYSNKEVFLRELISNASDALDKLRYLGVTEPELLKDAVDLDIRIQTDKDNGIITITDSG 173 (801)
Q Consensus 94 ~~e~~~F~~e~~~ll~ll~~~LYs~~~vfLRELIqNA~DA~~k~r~~~~~~~~~~~~~~~~~I~I~~d~~~~~l~I~DNG 173 (801)
..|++.||+|+++|++||+++||+++++|||||||||+||++|+||+++++++.+..+.++.|+|.++++.++|+|+|||
T Consensus 21 ~~e~~~Fqaei~~Ll~li~~sLYsn~eifLRELIsNA~DA~dk~r~~~l~~~~~~~~a~~~~I~I~~d~~~~~I~I~DnG 100 (666)
T 2o1u_A 21 MSEKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENALAGNEELTVKIKCDKEKNLLHVTDTG 100 (666)
T ss_dssp -------------CCSSSTTTTSSSCTTHHHHHHHHHHHHHHHHHHHTTSCTTSSSSCCCCCEEEEEETTTTEEEEEECS
T ss_pred CCCCEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCEEEEEEECCCCEEEEEECC
T ss_conf 33214257769999999887326982398999875699999988887426802116787637999993897789999889
Q ss_pred CCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCC-CCCCCCCCCCCHHHHHHCCCCEEEEEEECCCCCCCEEEEEECCCC
Q ss_conf 9899998999999985014164799863034579-999633454411222011258689998118999718999836997
Q 003713 174 IGMTQQDLVDCLGTIAQSGTAKFLKAMKDSKDAG-GDSNLIGQFGVGFYSAFLVSDRVVVETKSPKSDKQYVWEGEANAS 252 (801)
Q Consensus 174 iGMt~eel~~~l~tIa~Sg~~~f~~~~~~~~~~~-~~~~~IGqFGIGf~S~F~vadkV~V~Tk~~~~~~~~~w~s~~~~~ 252 (801)
+|||++||..+|++||+||++.|+++++++.+.+ .+...||||||||||+||||++|+|+||+.+ +.++.|+++| |
T Consensus 101 iGMt~edl~~~l~tIA~SGtk~f~~kl~~~~~~~~~d~~~IGqFGvGfySaf~vAdkV~V~Sr~~~-~~~~~W~s~g--g 177 (666)
T 2o1u_A 101 VGMTREELVKNLGTIAKSGTSEFLNKMTEAQEDGQSTSELIGQFGVGFYSAFLVADKVIVTSKHNN-DTQHIWESDS--N 177 (666)
T ss_dssp CCCCHHHHHHHTTC-------------------------------CTTGGGGGTEEEEEEEEECTT-SCCEEEEESS--S
T ss_pred CCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCHHHHHHHHCCEEEEEEEECC-CCEEEEEEEC--C
T ss_conf 898999999997655253628889986400235532055426788078859875588899996189-7469999958--8
Q ss_pred CEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 25999517998778996489999637975679978899999974167876738601356321235788833445562016
Q 003713 253 SYTIREETNPEKLLPRGTRLTLYLKHDDKGFAHPERIQKLVKNYSQFVSFPIYTWQEKGYTKEVEVDEDPAETNKDKQDE 332 (801)
Q Consensus 253 ~y~I~~~~~~~~~~~~GT~I~L~Lk~~~~e~l~~~~i~~likkys~fi~~PI~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (801)
.|+|++...+ ...++||+|+|+|+++..+|++.++|+++|++||+|+++||+++.++.. ++
T Consensus 178 ~~ti~~~~~~-~~~~~GT~I~L~Lk~d~~Efle~~~I~~ivkkys~fi~~PI~~~~~~~~----~~-------------- 238 (666)
T 2o1u_A 178 EFSVIADPRG-NTLGRGTTITLVLKEEASDYLELDTIKNLVKKYSQFINFPIYVWSSKTG----GG-------------- 238 (666)
T ss_dssp CCEEEECTTC-CSSSSEEEEEEEECTTTTTSSSTTHHHHHHHHHSTTCCSCEEEEECC----------------------
T ss_pred EEEEEECCCC-CCCCCCEEEEEEECCCHHHHCCHHHHHHHHHHHHHHCCCCEEEECCCCC----CC--------------
T ss_conf 6798755667-7899973899997661254431889999999987437986697034444----55--------------
Q ss_pred HHHHHHCCCCEEECCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEEEECCCCCC
Q ss_conf 89853012311200343100246898832599999989999999997068999840232102553013799984089999
Q 003713 333 TAEKKKKTKTVVERYWDWELTNETQPIWLRNPKEVTTEEYNEFYKKTFNEYLDPLASSHFTTEGEVEFRSILYVPAVAPM 412 (801)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~iN~~~plW~r~~~~v~~eey~~fyk~~~~~~~~pl~~~h~~~eg~~~~~~llyiP~~~p~ 412 (801)
++++.+|+.+|+++|+|+|++.++++|+|.+||++++++|.+||+|+|+++||+++|+|+||+|.++|+
T Consensus 239 -----------~~~~~~~~~iN~~~~lw~~~~~~i~~eey~~fy~~~~~d~~~pl~~ih~~~eg~~~~~gll~iP~~~p~ 307 (666)
T 2o1u_A 239 -----------GKTVWDWELMNDIKPIWQRPSKEVEDDEYKAFYKSFSKESDDPMAYIHFTAEGEVTFKSILFVPTSAPR 307 (666)
T ss_dssp --------------CCEEEECSCCSCTTTSCTTTCCHHHHHHHHHHTTCTTSCCSEEEEEEECSSSCEEEEEEECSSCCC
T ss_pred -----------CCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCH
T ss_conf -----------423443289866843003586303399999998664112005705897314674799999972787824
Q ss_pred CCCCCCC--CCCCCEEEEEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 9765567--87768189964477404899897721223400363189999863677640459999999999999999999
Q 003713 413 GKDDLIN--PKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSNDLPLNVSREILQESRIVRIMRKRLVRKAFDMIL 490 (801)
Q Consensus 413 ~~~~~~~--~~~~~i~LYv~rVfI~d~~~~~llP~~l~FvkGVVDS~DLpLNvSRE~LQ~~~~l~~I~k~i~~ki~~~l~ 490 (801)
+++.. + ..+++++||||||||+|+|. +|||+||+||+|||||+|||||||||+||+|+++++|+++|++|++++|.
T Consensus 308 d~~~~-~~~~~~~~i~LYVn~vfI~d~~~-~llP~~l~FvkGvVDs~dLplNVSRE~LQ~~~~l~~I~~~l~kkv~~~l~ 385 (666)
T 2o1u_A 308 GLFDE-YGSKKSDYIKLYVRRVFITDDFH-DMMPKYLNFVKGVVDSDDLPLNVSRETLQQHKLLKVIRKKLVRKTLDMIK 385 (666)
T ss_dssp -------------CEEEEETTEEEESCCC-TTSCGGGTTCEEEEEESSSCSSSCHHHHHTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHH-CCCCCCCCEEEEECCEEEECCHH-HHHHHHHHHEEEEECHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 54421-00024688699994868007323-05278797716544775579710625530478999999999999999999
Q ss_pred HHHHCCCHHHHH-HHHHHHHHHHHHCCCCCCCCHHHCCCCCCEEECCCCCCCCCHHHHHHHCCCCCCCEEEEECCCHHHH
Q ss_conf 652037968899-9999996885231457821731004831102135899411687888604889960999926899899
Q 003713 491 GISMSENRADYE-KFWENFGKYLKMGCIDDRENHKPLAPLLRFFSSQSEDEMISLDEYVENMKPEQKDIYFIAADSVASA 569 (801)
Q Consensus 491 ~la~~~d~e~y~-~f~~~fg~~lK~G~~eD~~n~e~i~~LLrF~Ss~~~~~~~SL~eYv~rmke~Qk~IYY~~~~s~~~~ 569 (801)
++++ |+|+ +||++||.+||+|+++|..|+++|++||||+||+++++++||+||++|||++|+.|||++|+|++++
T Consensus 386 ~l~~----e~y~~~f~~~f~~~lK~G~~~D~~~~~~l~~ll~f~ss~~~~~~~sL~eYv~rmke~Q~~IyY~t~~~~~~~ 461 (666)
T 2o1u_A 386 KIAD----EKYNDTFWKEFGTNIKLGVIEDHSNRTRLAKLLRFQSSHHPSDITSLDQYVERMKEKQDKIYFMAGSSRKEA 461 (666)
T ss_dssp HSCH----HHHHHTHHHHHHHHHHHHHHHCGGGHHHHHTTCCEEETTSSSCEECHHHHHHHSCTTCCEEEEEECSSHHHH
T ss_pred HHHH----HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEEECCCCCCEEEHHHHHHHCCCCCCEEEEEECCCHHHH
T ss_conf 9988----889999999987987625305787899988635863037888615099998746144643999958987887
Q ss_pred HCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCHHHH--HHHHHHHHHHHHHHHHH-HCC
Q ss_conf 538669997417946999459862899997631069735762255457687716778--86368798799999977-089
Q 003713 570 RNTPFLEKLLEKDLEVLYLVDPIDEIAVQNLKSYKEKNFVDISKEDLDLGEKNEEKE--KVMKEEFGQTCDWIKKR-LGD 646 (801)
Q Consensus 570 ~~sp~~E~~~~kg~eVL~l~dpiDE~~l~~L~~f~gk~fvsV~k~~l~l~~~~e~~~--~~~~~ef~~L~~~lKe~-Lg~ 646 (801)
++|||+|.|++||||||||+|||||||+++|.+|+|++|++|++++++|++.+++++ ++.++++++||+|||+. |++
T Consensus 462 ~~sp~~e~~~~kg~eVl~l~~~iDe~~~~~l~e~~gk~~~~v~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~k~~~L~~ 541 (666)
T 2o1u_A 462 ESSPFVERLLKKGYEVIYLTEPVDEYCIQALPEFDGKRFQNVAKEGVKFDESEKTKESREAIEKEFEPLLNWMKDKALKD 541 (666)
T ss_dssp HTCGGGHHHHHTTCCCEEECSTHHHHHHHTCCCBTTBEEEETTBSCCCCCCCHHHHHHHHHHHHHSHHHHHHHHHTTTTT
T ss_pred HHCCHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 61927789986796699937840799999998608973587133344521010234445665776899999998562778
Q ss_pred CEEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHCC--C-CCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCHH
Q ss_conf 50599810258899759981687850999999998404--9-99842224787149988999578998963018999457
Q 003713 647 KVASVQISNRLSSSPCVLVSAKFGWSANMERLMKAQTV--G-DTSSMEFMRGRRVFEINPEHPIIQNLNAASKNCPDDND 723 (801)
Q Consensus 647 kV~~V~vS~RL~ssP~~iv~~e~g~s~~Merimkaq~~--~-~~~~~~~~~~k~vLEINp~HPLIk~L~~~~~~d~~d~~ 723 (801)
+|.+|++|+||++||||||++++|||++|||||++|++ . ++++..+|..+++|||||+||||++|..+...+++++.
T Consensus 542 ~v~~V~~s~rl~~sP~~lv~~~~~~s~~m~r~~~~~~~~~~~~~~~~~~~~~k~~LeiNp~H~li~~l~~~~~~~~~~~~ 621 (666)
T 2o1u_A 542 KIEKAVVSQRLTESPCALVASQYGWSGNMERIMKAQAYQTGKDISTNYYASQKKTFEINPRHPLIKDMLRRVKEDEDDKT 621 (666)
T ss_dssp TEEEEEECSSCSSCSEEEEBCTTSCCHHHHHHHHHHHHHTSCCCCSCSSSSCCEEEEECTTSHHHHHHHHHHHHCTTCHH
T ss_pred CEEEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCHHH
T ss_conf 60599986437899769996676668999999998531124675322234557026888999799999986432656689
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 99999999999998299999898999999999997203999999
Q 003713 724 ALRVVDLLYDAALVSSGFTPENPAELGSKIYEMLGMNLQGKWSV 767 (801)
Q Consensus 724 ~~~~a~lLyd~AlLs~G~~leDp~~f~~ri~~ll~~~L~~~~~~ 767 (801)
++++|+||||+|+|++||+++||+.|++|+|+||.++|++++++
T Consensus 622 ~~~~~~~l~d~All~~G~~~~dp~~f~~r~~~ll~~~l~~~~~~ 665 (666)
T 2o1u_A 622 VSDLAVVLFETATLRSGYLLPDTKAYGDRIERMLRLSLNIDPDA 665 (666)
T ss_dssp HHHHHHHHHHHHHHHHTCCCSCHHHHHHHHHHHHHTTSCC----
T ss_pred HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99999999998898689983169999999999999853998457
No 3
>2ioq_A Chaperone protein HTPG; heat shock protein, HSP90; 3.50A {Escherichia coli} PDB: 2iop_A
Probab=1.00 E-value=1 Score=1248.88 Aligned_cols=613 Identities=39% Similarity=0.680 Sum_probs=565.6
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCC
Q ss_conf 65322110088999998864999953789997870996989887311579643468987309999818995899995899
Q 003713 95 LEKYEYQAEVSRLMDLIVNSLYSNKEVFLRELISNASDALDKLRYLGVTEPELLKDAVDLDIRIQTDKDNGIITITDSGI 174 (801)
Q Consensus 95 ~e~~~F~~e~~~ll~ll~~~LYs~~~vfLRELIqNA~DA~~k~r~~~~~~~~~~~~~~~~~I~I~~d~~~~~l~I~DNGi 174 (801)
.|++.||+++++||++|+++||+++++|||||||||+||++|+||+++++|++...+.++.|+|.++++.++|+|.|||+
T Consensus 4 ~e~~~Fqaei~~Ll~ll~~~lYsn~~ifLrELIsNA~DA~~k~r~~~l~~~~~~~~a~~~~I~I~~d~~~~~I~I~DnGi 83 (624)
T 2ioq_A 4 QETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGV 83 (624)
T ss_dssp -----------CCHHHHHHHHSSCTTHHHHHHHHHHHHHHHHHHHHHHTSTTTTTTCCCCCEEEEEETTTTEEEEEECSC
T ss_pred CCCEEEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCC
T ss_conf 54332041399999999873379857999999997998656567764268100367887479999968974899998998
Q ss_pred CCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEEECCC--CCCCEEEEEECCCC
Q ss_conf 8999989999999850141647998630345799996334544112220112586899981189--99718999836997
Q 003713 175 GMTQQDLVDCLGTIAQSGTAKFLKAMKDSKDAGGDSNLIGQFGVGFYSAFLVSDRVVVETKSPK--SDKQYVWEGEANAS 252 (801)
Q Consensus 175 GMt~eel~~~l~tIa~Sg~~~f~~~~~~~~~~~~~~~~IGqFGIGf~S~F~vadkV~V~Tk~~~--~~~~~~w~s~~~~~ 252 (801)
|||+++|..+|++||+||++.|+++++.+. ..+...||||||||||+||||++|+|+|++.+ ...++.|+++|+ +
T Consensus 84 GMt~edl~~~l~tiA~Sg~~~f~~~l~~~~--~~~~~~iG~fGvGfyS~f~VadkV~V~Sr~~~~~~~~~~~w~s~g~-~ 160 (624)
T 2ioq_A 84 GMTRDEVIDHLGTIAKSGTKSFLESLGSDQ--AKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGE-G 160 (624)
T ss_dssp CCCHHHHHHHHHHHCC-----------------CCTTHHHHHHHHHHHHHHHEEEEEEEEECTTSCGGGEEEEEECSS-S
T ss_pred CCCHHHHHHHHHHHCCCCCHHHHHHHCCCC--CCCCCCCCCCCCCHHHHHHCCCEEEEEECCCCCCCCEEEEEEEECC-C
T ss_conf 989999999987660556177898730111--1354445888843798970578699997789988872599999389-7
Q ss_pred CEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 25999517998778996489999637975679978899999974167876738601356321235788833445562016
Q 003713 253 SYTIREETNPEKLLPRGTRLTLYLKHDDKGFAHPERIQKLVKNYSQFVSFPIYTWQEKGYTKEVEVDEDPAETNKDKQDE 332 (801)
Q Consensus 253 ~y~I~~~~~~~~~~~~GT~I~L~Lk~~~~e~l~~~~i~~likkys~fi~~PI~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (801)
.|++.+... ..+||+|+|+|+++..+|++.++|+++|++||.|+++||+++.+. .++ +
T Consensus 161 ~~~i~~~~~----~~~GT~I~L~Lk~d~~Efl~~~~i~~ivkkys~fi~~PI~~~~~e-------~~~---------~-- 218 (624)
T 2ioq_A 161 EYTVADITK----EDRGTEITLHLREGEDEFLDDWRVRSIISKYSDHIALPVEIEKRE-------EKD---------G-- 218 (624)
T ss_dssp CCEEEEECC----SSSEEEEEEEECTTCGGGGCHHHHHHHHHHHHTTCSSCEEEEEEE-------ECS---------S--
T ss_pred EEEEEECCC----CCCCEEEEEEECCHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECC-------CCC---------C--
T ss_conf 478988888----899849999975623211508999999999723578753885024-------556---------6--
Q ss_pred HHHHHHCCCCEEECCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEEEECCCCCC
Q ss_conf 89853012311200343100246898832599999989999999997068999840232102553013799984089999
Q 003713 333 TAEKKKKTKTVVERYWDWELTNETQPIWLRNPKEVTTEEYNEFYKKTFNEYLDPLASSHFTTEGEVEFRSILYVPAVAPM 412 (801)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~iN~~~plW~r~~~~v~~eey~~fyk~~~~~~~~pl~~~h~~~eg~~~~~~llyiP~~~p~ 412 (801)
+ + +++|+.+|+.+|+|++++.++++++|.+||++++++|.+||+|+|+++||+++|+|+||+|..+|+
T Consensus 219 --------~---~-~~~~~~in~~~~lw~~~~~~i~~e~y~~fy~~~~~d~~~~l~~ih~~~eg~~~~~gll~~P~~~p~ 286 (624)
T 2ioq_A 219 --------E---T-VISWEKINKAQALWTRNKSEITDEEYKEFYKHIAHDFNDPLTWSHNRVEGKQEYTSLLYIPSQAPW 286 (624)
T ss_dssp --------C---E-EEEEEECCCCSCTTTSCTTTCCHHHHHHHHHHHHTCCSCCSCCEEEEEESSSCEEEEEECCSSCCG
T ss_pred --------C---C-CCCEEEEECCCCCEEECCCCCHHHHHHHHHHHHCCCHHCCEEEEEECCCCEEEEEEEEEECCCCCC
T ss_conf --------5---4-332289767811047468623099999998764111105848998425652899999991786761
Q ss_pred CCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 97655678776818996447740489989772122340036318999986367764045999999999999999999965
Q 003713 413 GKDDLINPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSNDLPLNVSREILQESRIVRIMRKRLVRKAFDMILGI 492 (801)
Q Consensus 413 ~~~~~~~~~~~~i~LYv~rVfI~d~~~~~llP~~l~FvkGVVDS~DLpLNvSRE~LQ~~~~l~~I~k~i~~ki~~~l~~l 492 (801)
++|.. ..+++++||||||||+|+|. +|||+||+||+|||||+|||||||||+||+|+++++|+++|++|++++|.++
T Consensus 287 ~~~~r--~~~~~i~lyvn~v~I~d~~~-~llP~~l~fv~gvVDs~dl~lNVSRE~LQ~~~~l~~I~~~l~kkv~~~l~~l 363 (624)
T 2ioq_A 287 DMWNR--DHKHGLKLYVQRVFIMDDAE-QFMPNYLRFVRGLIDSSDLPLNVSREILQDSTVTRNLRNALTKRVLQMLEKL 363 (624)
T ss_dssp GGSSS--SCCCCEEEEESSCEEEEEEC-SSSCTTSTTCEEEEEESSSCTTCCHHHHHHSSHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHH--CCCCCEEEEECCEEEECCHH-CCCHHHHHHEEEEECHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 01201--34687699997889216301-3253516107999887658971176343001899999999999999999998
Q ss_pred HHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCEEECCCCC--CCCCHHHHHHHCCCCCCCEEEEECCCHHHHH
Q ss_conf 20379688999999996885231457821731004831102135899--4116878886048899609999268998995
Q 003713 493 SMSENRADYEKFWENFGKYLKMGCIDDRENHKPLAPLLRFFSSQSED--EMISLDEYVENMKPEQKDIYFIAADSVASAR 570 (801)
Q Consensus 493 a~~~d~e~y~~f~~~fg~~lK~G~~eD~~n~e~i~~LLrF~Ss~~~~--~~~SL~eYv~rmke~Qk~IYY~~~~s~~~~~ 570 (801)
++ +|+++|++||++||.+||+|+++|..|+++|++||||+||++++ +++||+||++|||++|+.|||++|+|+++++
T Consensus 364 ~~-~d~e~y~~f~~~f~~~lK~G~~~D~~~~~~l~~ll~f~ss~~~~~~~~~sL~eY~~rmke~q~~IyY~t~~~~~~~~ 442 (624)
T 2ioq_A 364 AK-DDAEKYQTFWQQFGLVLKEGPAEDFANQEAIAKLLRFASTHTDSSAQTVSLEDYVSRMKEGQEKIYYITADSYAAAK 442 (624)
T ss_dssp HH-HCHHHHHHHHHHHHHHHTTHHHHCCTTHHHHHHHCCBEETTSSCSCCCBCHHHHHTTCCTTCCSEEEEECSSHHHHH
T ss_pred HH-CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEEECCCCCCCCEEEHHHHHHHCCCCCCEEEEEECCCHHHHH
T ss_conf 74-09999999999986876532125888899998750750068776787266999997543567559999389888886
Q ss_pred CCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCC-CHHHH--HHHHHHHHHHHHHHHHHHCCC
Q ss_conf 386699974179469994598628999976310697357622554576877-16778--863687987999999770895
Q 003713 571 NTPFLEKLLEKDLEVLYLVDPIDEIAVQNLKSYKEKNFVDISKEDLDLGEK-NEEKE--KVMKEEFGQTCDWIKKRLGDK 647 (801)
Q Consensus 571 ~sp~~E~~~~kg~eVL~l~dpiDE~~l~~L~~f~gk~fvsV~k~~l~l~~~-~e~~~--~~~~~ef~~L~~~lKe~Lg~k 647 (801)
+|||+|.|+++|||||||++||||+|+++|.+|+|++|++|++++++++.. +++++ ++.++++++||+|+|+.|+++
T Consensus 443 ~sp~~e~~~~kg~eVl~~~~~iDe~~~~~l~~~~~k~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~k~~L~~~ 522 (624)
T 2ioq_A 443 SSPHLELLRKKGIEVLLLSDRIDEWMMNYLTEFDGKPFQSVSKVDESLEKLADEVDESAKEAEKALTPFIDRVKALLGER 522 (624)
T ss_dssp HCHHHHHHHHHTCCCEEECSSTHHHHTTTCCEETTEEEEETTSCSTTTTTCC-------HHHHHHHHHHHHHHHHHSSSS
T ss_pred HCHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 08288999857966999467028999978986289528994012223323430221125676888999999999861577
Q ss_pred EEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCHHHHHH
Q ss_conf 05998102588997599816878509999999984049998422247871499889995789989630189994579999
Q 003713 648 VASVQISNRLSSSPCVLVSAKFGWSANMERLMKAQTVGDTSSMEFMRGRRVFEINPEHPIIQNLNAASKNCPDDNDALRV 727 (801)
Q Consensus 648 V~~V~vS~RL~ssP~~iv~~e~g~s~~Merimkaq~~~~~~~~~~~~~k~vLEINp~HPLIk~L~~~~~~d~~d~~~~~~ 727 (801)
|.+|++|+||+++|||+|++++|||++|+|||++|++ +++..+++|||||+||||++|... .+++.++++
T Consensus 523 v~~V~~s~rl~~sP~~lv~~~~~~~~~m~r~m~~~~~------~~~~~~~~LeiN~~hpli~~L~~~----~~~~~~~~~ 592 (624)
T 2ioq_A 523 VKDVRLTHRLTDTPAIVSTDADEMSTQMAKLFAAAGQ------KVPEVKYIFELNPDHVLVKRAADT----EDEAKFSEW 592 (624)
T ss_dssp SSEEEECCCCSSCCEEEECCC---------------------------CCEEEECTTCHHHHTTTSC----CCHHHHHHH
T ss_pred CEEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHH------CCCCCCCEEEECCCCHHHHHHHHH----CCHHHHHHH
T ss_conf 3499996437899679980676758999999997431------023448347877999899998862----287899999
Q ss_pred HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
Q ss_conf 9999999998299999898999999999997
Q 003713 728 VDLLYDAALVSSGFTPENPAELGSKIYEMLG 758 (801)
Q Consensus 728 a~lLyd~AlLs~G~~leDp~~f~~ri~~ll~ 758 (801)
+++|||+|+|++|++++||+.|++|+|+||.
T Consensus 593 ~~~L~d~All~~g~~l~dp~~f~~r~~~~l~ 623 (624)
T 2ioq_A 593 VELLLDQALLAERGTLEDPNLFIRRMNQLLV 623 (624)
T ss_dssp HHHHHHHHHHHHHSCCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
T ss_conf 9999998998689994079999999999963
No 4
>1y4s_A Chaperone protein HTPG; HSP90, molecular chaperone, ATPase; HET: ADP; 2.90A {Escherichia coli} PDB: 1y4u_A
Probab=1.00 E-value=1 Score=1124.28 Aligned_cols=548 Identities=40% Similarity=0.715 Sum_probs=507.6
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCC
Q ss_conf 65322110088999998864999953789997870996989887311579643468987309999818995899995899
Q 003713 95 LEKYEYQAEVSRLMDLIVNSLYSNKEVFLRELISNASDALDKLRYLGVTEPELLKDAVDLDIRIQTDKDNGIITITDSGI 174 (801)
Q Consensus 95 ~e~~~F~~e~~~ll~ll~~~LYs~~~vfLRELIqNA~DA~~k~r~~~~~~~~~~~~~~~~~I~I~~d~~~~~l~I~DNGi 174 (801)
.|++.||+++++|+++|+++||++|++|||||||||+||++|+|++++++|+++....++.|+|.+++++++|+|.|||+
T Consensus 4 ~e~~~Fqaei~~Ll~ll~~~lYsn~~ifLrELIsNA~DA~~k~r~~~l~~~~~~~~~~~~~I~I~~d~~~~~I~I~DnGi 83 (559)
T 1y4s_A 4 QETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGV 83 (559)
T ss_dssp CEEEECCTTHHHHHHHHHHHTGGGTTHHHHHHHHHHHHHHHHHHHHHHHCGGGGCSCCCCCEEEEEETTTTEEEEEECSS
T ss_pred CCCEEEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCEEEEEEECCCCEEEEEECCC
T ss_conf 55321030399999999874379848999999987998757677764268111267876479999968985899998998
Q ss_pred CCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEEECCCC--CCCEEEEEECCCC
Q ss_conf 89999899999998501416479986303457999963345441122201125868999811899--9718999836997
Q 003713 175 GMTQQDLVDCLGTIAQSGTAKFLKAMKDSKDAGGDSNLIGQFGVGFYSAFLVSDRVVVETKSPKS--DKQYVWEGEANAS 252 (801)
Q Consensus 175 GMt~eel~~~l~tIa~Sg~~~f~~~~~~~~~~~~~~~~IGqFGIGf~S~F~vadkV~V~Tk~~~~--~~~~~w~s~~~~~ 252 (801)
|||+++|..+|++||+||++.|+++++.+. ..+...||||||||||+||||++|+|+|++.+. ..++.|+++|+ +
T Consensus 84 GMt~edl~~~l~tiA~Sg~~~f~e~l~~~~--~~~~~~iG~fGvGfyS~f~VadkV~V~Sr~~~~~~~~~~~w~s~g~-~ 160 (559)
T 1y4s_A 84 GMTRDEVIDHLGTIAKSGTKSFLESLGSDQ--AKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGE-G 160 (559)
T ss_dssp CCCHHHHHHHHSCCSCCCCCCTTCC----------CCCCSSCCCSGGGHHHHEEEEEEEEECSSSCGGGEEEEEECSS-S
T ss_pred CCCHHHHHHHHHHHCCCCCHHHHHHHHCCC--CCCCCCCCCCCCCHHHHHHCCCEEEEEECCCCCCCCEEEEEEEECC-C
T ss_conf 889999999976551556277898741111--1354434888763565641457689997579988872489999379-7
Q ss_pred CEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 25999517998778996489999637975679978899999974167876738601356321235788833445562016
Q 003713 253 SYTIREETNPEKLLPRGTRLTLYLKHDDKGFAHPERIQKLVKNYSQFVSFPIYTWQEKGYTKEVEVDEDPAETNKDKQDE 332 (801)
Q Consensus 253 ~y~I~~~~~~~~~~~~GT~I~L~Lk~~~~e~l~~~~i~~likkys~fi~~PI~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (801)
.|++.+... .++||+|+|+|+++..+|++.++|+++|++||.|+++||+++.+. .++ +
T Consensus 161 ~~~i~~~~~----~~~GT~I~L~Lk~d~~Efle~~~I~~iv~kys~fi~~PI~~~~~e-------~~~---------~-- 218 (559)
T 1y4s_A 161 EYTVADITK----EDRGTEITLHLREGEDEFLDDWRVRSIISKYSDHIALPVEIEKRE-------EKD---------G-- 218 (559)
T ss_dssp EEEEEEECC----CSCEEEEEEEECTTCGGGSCHHHHHHHHHHHHTTCSSCEEEEEEE-------CST---------T--
T ss_pred EEEEEECCC----CCCCEEEEEEECCHHHHCCHHHHHHHHHHHHHCCCCCCEEEEECC-------CCC---------C--
T ss_conf 358867777----899839999976555423509999999999734578753896114-------556---------6--
Q ss_pred HHHHHHCCCCEEECCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEEEECCCCCC
Q ss_conf 89853012311200343100246898832599999989999999997068999840232102553013799984089999
Q 003713 333 TAEKKKKTKTVVERYWDWELTNETQPIWLRNPKEVTTEEYNEFYKKTFNEYLDPLASSHFTTEGEVEFRSILYVPAVAPM 412 (801)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~iN~~~plW~r~~~~v~~eey~~fyk~~~~~~~~pl~~~h~~~eg~~~~~~llyiP~~~p~ 412 (801)
+ .+++|+.+|+.+|+|++++.++++++|.+||++++++|.+||+|+|+++||+++|+|+||+|..+|+
T Consensus 219 --------~----~~~~~~~in~~~~lw~~~~~~i~~e~y~~fy~~~~~d~~~~l~~ih~~~eg~~~~~gll~~P~~~p~ 286 (559)
T 1y4s_A 219 --------E----TVISWEKINKAQALWTRNKSEITDEEYKEFYKHIAHDFNDPLTWSHNRVEGKQEYTSLLYIPSQAPW 286 (559)
T ss_dssp --------S----CEEEEEECCCCCCGGGSCGGGCCHHHHHHHHHHHHTCSSCEEEEEEECCCSSSCEEEEEEEESSCCT
T ss_pred --------C----CCCCEEEEECCCCCEECCCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEEEEEECCCCCCC
T ss_conf --------5----4332289757832222586403099999998764132424838998325785699999990786761
Q ss_pred CCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 97655678776818996447740489989772122340036318999986367764045999999999999999999965
Q 003713 413 GKDDLINPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSNDLPLNVSREILQESRIVRIMRKRLVRKAFDMILGI 492 (801)
Q Consensus 413 ~~~~~~~~~~~~i~LYv~rVfI~d~~~~~llP~~l~FvkGVVDS~DLpLNvSRE~LQ~~~~l~~I~k~i~~ki~~~l~~l 492 (801)
++|.. ..+++++||||||||+|+|. +|||+||+||+|||||+|||||||||+||+|+++++|+++|++|++++|.+|
T Consensus 287 ~~~~r--~~~~~i~lyvn~v~I~d~~~-~llP~~l~fv~gvVDs~dlplNVSRE~lq~~~~l~~I~~~l~kkv~~~l~~l 363 (559)
T 1y4s_A 287 DMWNR--DHKHGLKLYVQRVFIMDDAE-QFMPNYLRFVRGLIDSSDLPLNVSREILQDSTVTRNLRNALTKRVLQMLEKL 363 (559)
T ss_dssp TCSSS--SCCCCEEEEETTEEEEEEEG-GGSCGGGTTCEEEEEESSSCTTCCTTGGGGCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHH--CCCCCEEEEECCEEEECCHH-HHCHHHHHHEEEEECHHHCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 02202--13687699995879336123-0474757254674076227972175344233899999999999999999998
Q ss_pred HHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCEEECCCCC--CCCCHHHHHHHCCCCCCCEEEEECCCHHHHH
Q ss_conf 20379688999999996885231457821731004831102135899--4116878886048899609999268998995
Q 003713 493 SMSENRADYEKFWENFGKYLKMGCIDDRENHKPLAPLLRFFSSQSED--EMISLDEYVENMKPEQKDIYFIAADSVASAR 570 (801)
Q Consensus 493 a~~~d~e~y~~f~~~fg~~lK~G~~eD~~n~e~i~~LLrF~Ss~~~~--~~~SL~eYv~rmke~Qk~IYY~~~~s~~~~~ 570 (801)
++ +|+++|++||++||.+||+|+++|..|+++|++||||+||++++ +++||+||++|||++|+.|||++|+|+++++
T Consensus 364 ~~-~d~e~y~~f~~~f~~~lK~G~~~D~~~~~~l~~ll~f~ss~~~~~~~~~sL~eY~~rmk~~q~~IyY~t~~~~~~~~ 442 (559)
T 1y4s_A 364 AK-DDAEKYQTFWQQFGLVLKEGPAEDFANQEAIAKLLRFASTHTDSSAQTVSLEDYVSRMKEGQEKIYYITADSYAAAK 442 (559)
T ss_dssp HH-HCHHHHHHHHHHHHHHHTTSTTTCGGGHHHHHTTCEEBCSSCSSSSCCEETTSSSTTCCTTCSCCBEECCSSSHHHH
T ss_pred HH-CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEEECCCCCCCCEEEHHHHHHHCCCCCCEEEEEECCCHHHHH
T ss_conf 74-19999999999986775542004898999998741751057776787163999997543557559999389889886
Q ss_pred CCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCC-CHHHH--HHHHHHHHHHHHHHHHHHCCC
Q ss_conf 386699974179469994598628999976310697357622554576877-16778--863687987999999770895
Q 003713 571 NTPFLEKLLEKDLEVLYLVDPIDEIAVQNLKSYKEKNFVDISKEDLDLGEK-NEEKE--KVMKEEFGQTCDWIKKRLGDK 647 (801)
Q Consensus 571 ~sp~~E~~~~kg~eVL~l~dpiDE~~l~~L~~f~gk~fvsV~k~~l~l~~~-~e~~~--~~~~~ef~~L~~~lKe~Lg~k 647 (801)
+|||+|.|+++|||||||++||||+|+++|.+|+|++|++|+++++++++. +++++ ++.++++++||+|||+.|+++
T Consensus 443 ~sp~~e~~~~kg~eVl~~~~~iDe~~~~~l~~~~~k~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~k~~L~~~ 522 (559)
T 1y4s_A 443 SSPHLELLRKKGIEVLLLSDRIDEWMMNYLTEFDGKPFQSVSKVDESLEKLADEVDESAKEAEKALTPFIDRVKALLGER 522 (559)
T ss_dssp TCSSSHHHHHTTCCCEECCSTTHHHHHHHCCCCSSSCCBCC---------------------------------------
T ss_pred HCHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 08288999857956999367579999989998389027854423222212431233235677988999999999873577
Q ss_pred EEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHC
Q ss_conf 059981025889975998168785099999999840
Q 003713 648 VASVQISNRLSSSPCVLVSAKFGWSANMERLMKAQT 683 (801)
Q Consensus 648 V~~V~vS~RL~ssP~~iv~~e~g~s~~Merimkaq~ 683 (801)
|.+|++|+||++||||+|++++|||++|+|||++|+
T Consensus 523 v~~V~~s~rl~~sp~~~v~~~~~~~~~m~~~~~~~~ 558 (559)
T 1y4s_A 523 VKDVRLTHRLTDTPAIVSTDADEMSTQMAKLFAAAG 558 (559)
T ss_dssp ------------------------------------
T ss_pred CEEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHCC
T ss_conf 329999405789977999088773799999998647
No 5
>3q6m_A Heat shock protein HSP 90-alpha; three domains, trimer of dimer, hexamer, chaperone; 3.00A {Homo sapiens} PDB: 3q6n_A
Probab=1.00 E-value=1 Score=1007.17 Aligned_cols=442 Identities=42% Similarity=0.774 Sum_probs=418.1
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEE
Q ss_conf 68988325999999899999999970689998402321025530137999840899999765567877681899644774
Q 003713 355 ETQPIWLRNPKEVTTEEYNEFYKKTFNEYLDPLASSHFTTEGEVEFRSILYVPAVAPMGKDDLINPKTKNIRLYVKRVFI 434 (801)
Q Consensus 355 ~~~plW~r~~~~v~~eey~~fyk~~~~~~~~pl~~~h~~~eg~~~~~~llyiP~~~p~~~~~~~~~~~~~i~LYv~rVfI 434 (801)
.++|||+|+|++||+|||.+|||+++++|++||+|+||++||+++|+||||||+++||++|+. ...++||+||||||||
T Consensus 2 ~~~plW~r~~~eit~EeY~eFYk~l~~d~~dPL~~iH~~veg~~e~~~lLyiP~~ap~d~~~~-~~~~~~ikLYvrrVfI 80 (448)
T 3q6m_A 2 ATKPIWTRNPDDITNEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFVPRRAPFDLFEN-RKKKNNIKLYVRRVFI 80 (448)
T ss_dssp --CCGGGSCTTSCCHHHHHHHHHHHHCCSSCCSEEEEEEECSSSCEEEEEEECSSCCC----------CCEEEEETTEEE
T ss_pred CCCCCCCCCHHHCCHHHHHHHHHHHCCCCCCCHHEEEECCCCCEEEEEEEECCCCCCHHHHHH-HHHCCCEEEEEEEEEE
T ss_conf 988877889144999999999998627866873115532477705679997468782444400-3211560378653287
Q ss_pred ECCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 04899897721223400363189999863677640459999999999999999999652037968899999999688523
Q 003713 435 SDDFDGELFPRYLSFVKGVVDSNDLPLNVSREILQESRIVRIMRKRLVRKAFDMILGISMSENRADYEKFWENFGKYLKM 514 (801)
Q Consensus 435 ~d~~~~~llP~~l~FvkGVVDS~DLpLNvSRE~LQ~~~~l~~I~k~i~~ki~~~l~~la~~~d~e~y~~f~~~fg~~lK~ 514 (801)
+|+|+ +|||+||+||||||||+|||||||||+||+|+++++|+++|++|++++|.+++ +|+++|++||++||.+||+
T Consensus 81 ~d~~~-ellP~yL~FvkGVVDS~DLPLNVSRE~LQ~~~~lk~Irk~i~kKvl~~L~~la--~d~e~Y~~f~~~fg~~lK~ 157 (448)
T 3q6m_A 81 MDNCE-ELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRKNLVKKCLELFTELA--EDKENYKKFYEQFSKNIKL 157 (448)
T ss_dssp ESCCT-TSSCGGGTTCEEEEEESCCC---------CCSHHHHHHHHHHHHHHHHHHHHT--SSHHHHHHHHHHHHHHHHH
T ss_pred ECCHH-HHCHHHHHHEEEEECCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHH--HCHHHHHHHHHHHHHHHHH
T ss_conf 54622-22504354515773267788632577641489999999999999999999997--5999999999998698885
Q ss_pred CCCCCCCCHHHCCCCCCEEECCCCCCCCCHHHHHHHCCCCCCCEEEEECCCHHHHHCCHHHHHHHHCCCEEEEECCCCCH
Q ss_conf 14578217310048311021358994116878886048899609999268998995386699974179469994598628
Q 003713 515 GCIDDRENHKPLAPLLRFFSSQSEDEMISLDEYVENMKPEQKDIYFIAADSVASARNTPFLEKLLEKDLEVLYLVDPIDE 594 (801)
Q Consensus 515 G~~eD~~n~e~i~~LLrF~Ss~~~~~~~SL~eYv~rmke~Qk~IYY~~~~s~~~~~~sp~~E~~~~kg~eVL~l~dpiDE 594 (801)
|+++|..|+++|++||||+||+++++++||+||++||+++|+.|||++|+|++++++|||+|.|++||||||||++||||
T Consensus 158 Gi~eD~~n~~~l~~LLrF~Ss~~~~~~~SL~eYv~rmke~Qk~IYYitg~s~~~~~~sp~lE~~k~kG~EVL~l~d~iDe 237 (448)
T 3q6m_A 158 GIHEDSQNRKKLSELLRYYTSASGDEMVSLKDYCTRMKENQKHIYYITGETKDQVANSAFVERLRKHGLEVIYMIEPIDE 237 (448)
T ss_dssp HHHHCGGGHHHHHTTCEEEETTTTTSCEEHHHHHHTCCSSCCEEEEEECSCHHHHHTSGGGHHHHHHTCCEEEECSTHHH
T ss_pred HHCCCHHHHHHHHHHHEEEECCCCCCEEEHHHHHHHCCCCCCEEEEEECCCHHHHHHCHHHHHHHHCCCEEEEECCCHHH
T ss_conf 63056878999987537532058886073999997550548518998169999997386899999779779995681588
Q ss_pred HHHHHHHHCCCCCEEECCCCCCCCCCCCHHHH--HHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEECCCCCC
Q ss_conf 99997631069735762255457687716778--8636879879999997708950599810258899759981687850
Q 003713 595 IAVQNLKSYKEKNFVDISKEDLDLGEKNEEKE--KVMKEEFGQTCDWIKKRLGDKVASVQISNRLSSSPCVLVSAKFGWS 672 (801)
Q Consensus 595 ~~l~~L~~f~gk~fvsV~k~~l~l~~~~e~~~--~~~~~ef~~L~~~lKe~Lg~kV~~V~vS~RL~ssP~~iv~~e~g~s 672 (801)
||+++|.+|+|++|+||++++++|++.+++++ ++.+++|++||+|||+.||++|.+|++|+||++||||+|++++|||
T Consensus 238 ~~i~~L~ef~gk~~~sV~k~~l~l~~~eeek~~~ee~~~~~~~L~~~~K~~L~~kV~~V~vS~RL~~sP~~lv~~e~g~s 317 (448)
T 3q6m_A 238 YCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWT 317 (448)
T ss_dssp HHTTTCCEETTEEEEETTBSCCCCCCCHHHHHHHHHHHHHSHHHHHHHHHHTGGGCSEEEECSSCSSSSEEEEECSSSCC
T ss_pred HHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEECCCCHH
T ss_conf 99877776279037872112357543214566578889999999999999850711299834777888749992775623
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
Q ss_conf 99999999840499984222478714998899957899896301899945799999999999998299999898999999
Q 003713 673 ANMERLMKAQTVGDTSSMEFMRGRRVFEINPEHPIIQNLNAASKNCPDDNDALRVVDLLYDAALVSSGFTPENPAELGSK 752 (801)
Q Consensus 673 ~~Merimkaq~~~~~~~~~~~~~k~vLEINp~HPLIk~L~~~~~~d~~d~~~~~~a~lLyd~AlLs~G~~leDp~~f~~r 752 (801)
++|||||++|++++++++++|..++||||||+||||++|.++...|++++.++++|++|||+|+|++|++++||+.|++|
T Consensus 318 ~~Merimkaq~~~d~~~~~~~~~kk~LEINp~Hpli~~L~~~~~~d~~~~~~~~~~~lLyd~AlL~~G~~l~DP~~f~~r 397 (448)
T 3q6m_A 318 ANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANR 397 (448)
T ss_dssp HHHHHHCCC--------------CEEEEECTTCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHTTCCCSCHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
T ss_conf 99999999731335432235666703588999989999999865154416899999999976775289997799999999
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCC
Q ss_conf 9999972039999998853478999889-99976644556310435899
Q 003713 753 IYEMLGMNLQGKWSVPDAAEVQHPTATQ-SQTSQTYEAEVVEPAEAGGQ 800 (801)
Q Consensus 753 i~~ll~~~L~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~e~~~~~~~ 800 (801)
+|+||.++|+++++++.+++++++++.+ ||++++.+|+.||+|+...|
T Consensus 398 i~~ll~~~L~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (448)
T 3q6m_A 398 IYRMIKLGLGIDEDDPTADDTSAAVTEEMPPLEGDDDTSRMEEVDHHHH 446 (448)
T ss_dssp HHHHHHHTTC---------------------------------------
T ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCC
T ss_conf 9999997169984434445655556677998777863122011023334
No 6
>3hjc_A Heat shock protein 83-1; sleeping sickness, structura genomics, stress response protein, chaperone, structural GE consortium, SGC; 2.50A {Leishmania major}
Probab=1.00 E-value=1 Score=985.65 Aligned_cols=415 Identities=43% Similarity=0.780 Sum_probs=396.8
Q ss_pred CCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEE
Q ss_conf 43100246898832599999989999999997068999840232102553013799984089999976556787768189
Q 003713 348 WDWELTNETQPIWLRNPKEVTTEEYNEFYKKTFNEYLDPLASSHFTTEGEVEFRSILYVPAVAPMGKDDLINPKTKNIRL 427 (801)
Q Consensus 348 ~~~~~iN~~~plW~r~~~~v~~eey~~fyk~~~~~~~~pl~~~h~~~eg~~~~~~llyiP~~~p~~~~~~~~~~~~~i~L 427 (801)
.+|++||+++|||+|+|++|++|||.+|||+++++|++||+|+||++||+++|+||||||+++||++|+. ...++||+|
T Consensus 11 ~~~e~iN~~~plW~r~~~eit~EeY~eFYk~l~~d~~dPL~~iH~~veg~~~~~~lLyiP~~ap~dl~~~-~~~~~~ikL 89 (444)
T 3hjc_A 11 RENLYFQGHKPLWTRDPKDVTKEEYAAFYKAISNDWEDPAATKHFSVEGQLEFRSIMFVPKRAPFDMFEP-NKKRNNIKL 89 (444)
T ss_dssp --------CCCGGGSCGGGCCHHHHHHHHHHTSSCCSCCSEEEEEEECSSSCEEEEEEECSSCCC----C-CCCCCSEEE
T ss_pred CCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCHHHH-HHHCCCEEE
T ss_conf 7763605888887789441799999999998638866873168887336632568996478787320102-320478069
Q ss_pred EEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
Q ss_conf 96447740489989772122340036318999986367764045999999999999999999965203796889999999
Q 003713 428 YVKRVFISDDFDGELFPRYLSFVKGVVDSNDLPLNVSREILQESRIVRIMRKRLVRKAFDMILGISMSENRADYEKFWEN 507 (801)
Q Consensus 428 Yv~rVfI~d~~~~~llP~~l~FvkGVVDS~DLpLNvSRE~LQ~~~~l~~I~k~i~~ki~~~l~~la~~~d~e~y~~f~~~ 507 (801)
|||||||+|+|+ +|||+||+||||||||+|||||||||+||+|+++++||++|++|++++|.+++ +|+++|++||++
T Consensus 90 Yv~rVfI~D~~~-ellP~yL~FvkGVVDS~DLPLNVSRE~LQ~~~~lk~I~k~i~kKvl~~L~~la--~d~e~Y~kFw~~ 166 (444)
T 3hjc_A 90 YVRRVFIMDNCE-DLCPDWLGFVKGVVDSEDLPLNISRENLQQNKILKVIRKNIVKKCLEMFDEVA--ENKEDYKQFYEQ 166 (444)
T ss_dssp EETTEEEESCCG-GGSCGGGTTCEEEEEESSCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHT--TSHHHHHHHHHH
T ss_pred EEEEEEEECCHH-HHCHHHHHHHEEEECCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHH--HCHHHHHHHHHH
T ss_conf 986568506534-44558786626773367788633577750289999999999999999999998--699999999999
Q ss_pred HHHHHHHCCCCCCCCHHHCCCCCCEEECCCCCCCCCHHHHHHHCCCCCCCEEEEECCCHHHHHCCHHHHHHHHCCCEEEE
Q ss_conf 96885231457821731004831102135899411687888604889960999926899899538669997417946999
Q 003713 508 FGKYLKMGCIDDRENHKPLAPLLRFFSSQSEDEMISLDEYVENMKPEQKDIYFIAADSVASARNTPFLEKLLEKDLEVLY 587 (801)
Q Consensus 508 fg~~lK~G~~eD~~n~e~i~~LLrF~Ss~~~~~~~SL~eYv~rmke~Qk~IYY~~~~s~~~~~~sp~~E~~~~kg~eVL~ 587 (801)
||.+||+|+++|..|+++|++||||+||+++++++||+||++||+++|+.|||++|+|++++++|||+|.|++|||||||
T Consensus 167 fg~~lK~G~~eD~~~~~~l~~lLrF~ss~~~~~~~SL~eYv~rmke~Qk~IYYitg~s~~~~~~sp~lE~~k~kG~EVL~ 246 (444)
T 3hjc_A 167 FGKNIKLGIHEDTANRKKLMELLRFYSTESGEEMTTLKDYVTRMKAGQKSIYYITGDSKKKLETSPFIEQARRRGLEVLF 246 (444)
T ss_dssp HHHHHHHHHTTCGGGHHHHHHHCCBCBTTTTTSCBCHHHHHHTCCTTCCEEEEEECSCHHHHHTCGGGHHHHHHTCCEEE
T ss_pred HHHHHHCCCCCCHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHCCCCCCEEEEEECCCHHHHHHCHHHHHHHHCCCEEEE
T ss_conf 86987303156687899888741752224888728199999754055852899827999999728389999867967999
Q ss_pred ECCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCHHHH--HHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEE
Q ss_conf 459862899997631069735762255457687716778--863687987999999770895059981025889975998
Q 003713 588 LVDPIDEIAVQNLKSYKEKNFVDISKEDLDLGEKNEEKE--KVMKEEFGQTCDWIKKRLGDKVASVQISNRLSSSPCVLV 665 (801)
Q Consensus 588 l~dpiDE~~l~~L~~f~gk~fvsV~k~~l~l~~~~e~~~--~~~~~ef~~L~~~lKe~Lg~kV~~V~vS~RL~ssP~~iv 665 (801)
|++||||||+++|.+|+|++|+||++++++|++.+++++ ++.++++++||+|+|+.|+++|.+|++|+||++||||+|
T Consensus 247 l~d~iDe~~i~~L~e~~gk~f~sV~k~~l~l~~~eeek~~~ee~~~~~~~L~~~~K~~L~~kV~~V~vS~RL~~sP~~lv 326 (444)
T 3hjc_A 247 MTEPIDEYVMQQVKDFEDKKFACLTKEGVHFEESEEEKQQREEEKAACEKLCKTMKEVLGDKVEKVIVSERLSTSPCILV 326 (444)
T ss_dssp ECSHHHHHHHHHCCEETTEEEEETTBSSCCCCCCHHHHHHHHHHHHHTHHHHHHHHHHHGGGCSEEEECSSCSSSSEEEE
T ss_pred ECCCHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEE
T ss_conf 57842899999998718912797130113201101222335778999999999999984473318994477788986998
Q ss_pred ECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 16878509999999984049998422247871499889995789989630189994579999999999999829999989
Q 003713 666 SAKFGWSANMERLMKAQTVGDTSSMEFMRGRRVFEINPEHPIIQNLNAASKNCPDDNDALRVVDLLYDAALVSSGFTPEN 745 (801)
Q Consensus 666 ~~e~g~s~~Merimkaq~~~~~~~~~~~~~k~vLEINp~HPLIk~L~~~~~~d~~d~~~~~~a~lLyd~AlLs~G~~leD 745 (801)
++++|||++|||||++|+++++++.++|..+++|||||+||||++|.++...+++++.++++|++|||+|+|++|++++|
T Consensus 327 ~~e~g~s~~Merimka~~~~~~~~~~~~~~k~~LEINp~Hpli~~L~~~~~~d~~~~~~~~l~~lLyd~AlL~~G~~led 406 (444)
T 3hjc_A 327 TSEFGWSAHMEQIMRNQALRDSSMAQYMMSKKTMELNPRHPIIKELRRRVGADENDKAVKDLVFLLFDTSLLTSGFQLED 406 (444)
T ss_dssp BCSSSBCHHHHHHHHHC--------CTTBCCCEEEECTTSHHHHHHHHHHHTC-CCHHHHHHHHHHHHHHHHHHTCCCSC
T ss_pred CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 17755469999999972133554222455572678789997999999875337566899999999999899868998116
Q ss_pred HHHHHHHHHHHHHHHCCCCCC
Q ss_conf 899999999999720399999
Q 003713 746 PAELGSKIYEMLGMNLQGKWS 766 (801)
Q Consensus 746 p~~f~~ri~~ll~~~L~~~~~ 766 (801)
|+.|++|+|+||.++|+++++
T Consensus 407 p~~f~~ri~~ll~~~l~~~~~ 427 (444)
T 3hjc_A 407 PTGYAERINRMIKLGLSLDEE 427 (444)
T ss_dssp HHHHHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHHHHHHCCCCCC
T ss_conf 999999999999985599833
No 7
>2cge_A ATP-dependent molecular chaperone HSP82; chaperone complex, heat shock protein, CO-chaperone, ATP-binding, heat shock; 3.0A {Saccharomyces cerevisiae}
Probab=1.00 E-value=1 Score=938.33 Aligned_cols=402 Identities=43% Similarity=0.792 Sum_probs=380.9
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEEE
Q ss_conf 89883259999998999999999706899984023210255301379998408999997655678776818996447740
Q 003713 356 TQPIWLRNPKEVTTEEYNEFYKKTFNEYLDPLASSHFTTEGEVEFRSILYVPAVAPMGKDDLINPKTKNIRLYVKRVFIS 435 (801)
Q Consensus 356 ~~plW~r~~~~v~~eey~~fyk~~~~~~~~pl~~~h~~~eg~~~~~~llyiP~~~p~~~~~~~~~~~~~i~LYv~rVfI~ 435 (801)
++|||+|+|++|++|||.+|||+++++|++||+|+||++||+++|+||||||+++|+++|+. ...+++|+||||||||+
T Consensus 1 ~~plW~r~~~eit~EeY~eFYk~l~~d~~~PL~~iH~~veg~~~~~~lLyiP~~ap~d~~~~-~~~~~~ikLYvrrVfI~ 79 (405)
T 2cge_A 1 TKPLWTRNPSDITQEEYNAFYKSISNDWEDPLYVKHFSVEGQLEFRAILFIPKRAPFDLFES-KKKKNNIKLYVRRVFIT 79 (405)
T ss_dssp CCCGGGSCGGGSCTTHHHHHHHHHHCCSSCCSEEEEEEECSSSCEEEEEEECSSCSSCSSSS-CCCCCCCEEEETTEEEE
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCHHHHHH-HHCCCCEEEEEEEEEEC
T ss_conf 99986788342999999999998638876870678842477755259999369895133313-32047817997316712
Q ss_pred CCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC
Q ss_conf 48998977212234003631899998636776404599999999999999999996520379688999999996885231
Q 003713 436 DDFDGELFPRYLSFVKGVVDSNDLPLNVSREILQESRIVRIMRKRLVRKAFDMILGISMSENRADYEKFWENFGKYLKMG 515 (801)
Q Consensus 436 d~~~~~llP~~l~FvkGVVDS~DLpLNvSRE~LQ~~~~l~~I~k~i~~ki~~~l~~la~~~d~e~y~~f~~~fg~~lK~G 515 (801)
|+|+ +|||+||+||||||||+|||||||||+||+|+++++|+++|++|++++|.++++ |+|+|++||++||.+||+|
T Consensus 80 d~~~-~llP~yL~FvkGVVDS~DLPLNvSRE~LQ~~~~lk~I~~~l~kkvl~~L~~la~--~~e~y~kf~~~fg~~lK~G 156 (405)
T 2cge_A 80 DEAE-DLIPEWLSFVKGVVDSEDLPLNLSREMLQQNKIMKVIRKNIVKKLIEAFNEIAE--DSEQFEKFYSAFSKNIKLG 156 (405)
T ss_dssp SSCS-SSSCGGGTTCEEEEEESSCCSSCCTTCTHHHHHHHHHHHHHHHHHHHHHHHHTT--SHHHHHHHHHHHHHHHHHH
T ss_pred CCHH-HHCHHHHHHHHHCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH--CHHHHHHHHHHHHHHHCCH
T ss_conf 7555-557589998750266466686437666334389999999999999999999865--9999999999962564202
Q ss_pred CCCCCCCHHHCCCCCCEEECCCCCCCCCHHHHHHHCCCCCCCEEEEECCCHHHHHCCHHHHHHHHCCCEEEEECCCCCHH
Q ss_conf 45782173100483110213589941168788860488996099992689989953866999741794699945986289
Q 003713 516 CIDDRENHKPLAPLLRFFSSQSEDEMISLDEYVENMKPEQKDIYFIAADSVASARNTPFLEKLLEKDLEVLYLVDPIDEI 595 (801)
Q Consensus 516 ~~eD~~n~e~i~~LLrF~Ss~~~~~~~SL~eYv~rmke~Qk~IYY~~~~s~~~~~~sp~~E~~~~kg~eVL~l~dpiDE~ 595 (801)
+++|..|+++|++||||+||+++++++||+||++||+++|+.|||++|+|++++++|||+|.|+++|||||||++||||+
T Consensus 157 ~~eD~~~~~~l~~lLrF~ss~~~~~~~sL~eYv~rmke~Q~~IyY~t~~s~~~~~~sp~~E~~k~kG~EVL~l~d~iDe~ 236 (405)
T 2cge_A 157 VHEDTQNRAALAKLLRYNSTKSVDELTSLTDYVTRMPEHQKNIYYITGESLKAVEKSPFLDALKAKNFEVLFLTDPIDEY 236 (405)
T ss_dssp HHHCTTTHHHHHTTCEECBSSCSSSCEEHHHHHHTCCTTCCSEEEEECSCHHHHHTCTTHHHHHHHTCCEEEECSHHHHH
T ss_pred HCCCHHHHHHHHHHHEEEECCCCCCEEEHHHHHHHCCCCCCEEEEEECCCHHHHHCCHHHHHHHHCCCEEEEECCCHHHH
T ss_conf 02588889999874066443788843659999985537886599995888887741869889986797799836730799
Q ss_pred HHHHHHHCCCCCEEECCCCCCCCCCCCHHHH--HHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEECCCCCCH
Q ss_conf 9997631069735762255457687716778--86368798799999977089505998102588997599816878509
Q 003713 596 AVQNLKSYKEKNFVDISKEDLDLGEKNEEKE--KVMKEEFGQTCDWIKKRLGDKVASVQISNRLSSSPCVLVSAKFGWSA 673 (801)
Q Consensus 596 ~l~~L~~f~gk~fvsV~k~~l~l~~~~e~~~--~~~~~ef~~L~~~lKe~Lg~kV~~V~vS~RL~ssP~~iv~~e~g~s~ 673 (801)
|+++|.+|+|++|++|+++ ++|++.+++++ ++.++++++||+|+|++|+++|.+|++|+||++||||+|++++|||+
T Consensus 237 ~i~~L~e~~gk~~~sV~~~-l~l~~~e~~~~~~~~~~~~~~~L~~~~k~~L~~~v~~V~~s~rl~~sP~~lv~~~~~~s~ 315 (405)
T 2cge_A 237 AFTQLKEFEGKTLVDITKD-FELEETDEEKAEREKEIKEYEPLTKALKEILGDQVEKVVVSYKLLDAPAAIRTGQFGWSA 315 (405)
T ss_dssp HHHHHCBSSSBEEESSBCC-CCSSSSTHHHHHHHHHHHHHHHHHHHHHHHHTTSCSEEEECSSCCSSSEEEEECSSSCCH
T ss_pred HHHHHHHHCCCEEEECCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEECCCCCCH
T ss_conf 9878987479606973323-464311012344667677799999999987367522899875268897699955655329
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCC-CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
Q ss_conf 999999984049998422247871499889995789989630189-9945799999999999998299999898999999
Q 003713 674 NMERLMKAQTVGDTSSMEFMRGRRVFEINPEHPIIQNLNAASKNC-PDDNDALRVVDLLYDAALVSSGFTPENPAELGSK 752 (801)
Q Consensus 674 ~Merimkaq~~~~~~~~~~~~~k~vLEINp~HPLIk~L~~~~~~d-~~d~~~~~~a~lLyd~AlLs~G~~leDp~~f~~r 752 (801)
+|||||++|+++++++.++|..+++|||||+||||++|..+...+ ++++.++++|++|||+|+|++|++++||+.|++|
T Consensus 316 ~mer~~k~~~~~~~~~~~~~~~k~~LeiNp~Hpli~~L~~~~~~~~~~~~~~~~~~~~Lyd~AlL~~G~~~~dp~~f~~r 395 (405)
T 2cge_A 316 NMERIMKAQALRDSSMSSYMSSKKTFEISPKSPIIKELKKRVDEGGAQDKTVKDLTKLLYETALLTSGFSLDEPTSFASR 395 (405)
T ss_dssp HHHHHHHHHHTTSSSCCCCCCCCEEEEECTTSHHHHHHHHHHTTTGGGCHHHHHHHHHHHHHHHHHTTCCCSCHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
T ss_conf 99999998651033421135557069986999899999986441455779999999999999998689983069999999
Q ss_pred HHHHHHHHCC
Q ss_conf 9999972039
Q 003713 753 IYEMLGMNLQ 762 (801)
Q Consensus 753 i~~ll~~~L~ 762 (801)
+|+||.++|+
T Consensus 396 ~~~ll~~~l~ 405 (405)
T 2cge_A 396 INRLISLGLN 405 (405)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHCC
T ss_conf 9999998649
No 8
>1hk7_A Heat shock protein HSP82; ATPase, chaperone; 2.5A {Saccharomyces cerevisiae} SCOP: d.14.1.8
Probab=1.00 E-value=1 Score=700.67 Aligned_cols=286 Identities=46% Similarity=0.832 Sum_probs=272.8
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEEE
Q ss_conf 89883259999998999999999706899984023210255301379998408999997655678776818996447740
Q 003713 356 TQPIWLRNPKEVTTEEYNEFYKKTFNEYLDPLASSHFTTEGEVEFRSILYVPAVAPMGKDDLINPKTKNIRLYVKRVFIS 435 (801)
Q Consensus 356 ~~plW~r~~~~v~~eey~~fyk~~~~~~~~pl~~~h~~~eg~~~~~~llyiP~~~p~~~~~~~~~~~~~i~LYv~rVfI~ 435 (801)
++|||+|+|++||+|||.+|||+++++|++||+|+||++||+++|+||||||+++|+++|+. ++.++||+||||||||+
T Consensus 1 ~~plW~r~~~eit~EeY~eFYk~l~~d~~dPL~~~H~~veg~~~~~~lLyiP~~ap~dl~~~-~~~~~~ikLYvrrVfI~ 79 (288)
T 1hk7_A 1 TKPLWTRNPSDITQEEYNAFYKSISNDWEDPLYVKHFSVEGQLEFRAILFIPKRAPFDLFES-KKKKNNIKLYVRRVFIT 79 (288)
T ss_dssp CCCGGGSCTTTCCTTHHHHHHHHHHSCCSCCSEEEEEEECSSSCEEEEEEECSSCCCCCSSS-CCCCCCCEEEETTEEEE
T ss_pred CCCCCCCCCHHCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCHHHHH-HHCCCCEEEEEEEEEEE
T ss_conf 99861389034999999999987648853670578872267720689999369895022322-30268817997304810
Q ss_pred CCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC
Q ss_conf 48998977212234003631899998636776404599999999999999999996520379688999999996885231
Q 003713 436 DDFDGELFPRYLSFVKGVVDSNDLPLNVSREILQESRIVRIMRKRLVRKAFDMILGISMSENRADYEKFWENFGKYLKMG 515 (801)
Q Consensus 436 d~~~~~llP~~l~FvkGVVDS~DLpLNvSRE~LQ~~~~l~~I~k~i~~ki~~~l~~la~~~d~e~y~~f~~~fg~~lK~G 515 (801)
|+|+ +|||+||+||||||||+|||||||||+||+|+++++|+++|++|++++|.+++ +|+++|++||++||.+||+|
T Consensus 80 d~~~-~llP~yL~FvkGVVDS~DLPLNvSRE~LQ~~~~lk~I~k~i~kkvl~~l~~la--~d~e~Y~kf~~~fg~~lK~G 156 (288)
T 1hk7_A 80 DEAE-DLIPEWLSFVKGVVDSEDLPLNLSREMLQQNKIMKVIRKNIVKKLIEAFNEIA--EDSEQFEKFYSAFSKNIKLG 156 (288)
T ss_dssp SSCS-SSSCGGGTTCEEEEEESSCCCC-------CCHHHHHHHHHHHHHHHHHHHHHT--TSHHHHHHHHHHHHHHHHHH
T ss_pred CCHH-HHCHHHHHHHHHCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHH--HCHHHHHHHHHHHHHHHHHH
T ss_conf 5644-45648999873026646668741688745478999999999999999999985--68999999999983777535
Q ss_pred CCCCCCCHHHCCCCCCEEECCCCCCCCCHHHHHHHCCCCCCCEEEEECCCHHHHHCCHHHHHHHHCCCEEEEECCCCCHH
Q ss_conf 45782173100483110213589941168788860488996099992689989953866999741794699945986289
Q 003713 516 CIDDRENHKPLAPLLRFFSSQSEDEMISLDEYVENMKPEQKDIYFIAADSVASARNTPFLEKLLEKDLEVLYLVDPIDEI 595 (801)
Q Consensus 516 ~~eD~~n~e~i~~LLrF~Ss~~~~~~~SL~eYv~rmke~Qk~IYY~~~~s~~~~~~sp~~E~~~~kg~eVL~l~dpiDE~ 595 (801)
+++|..|+++|++||||+||+++++++||+||++||+++|+.|||++|+|++++++|||+|.|+++|||||||++||||+
T Consensus 157 i~eD~~nr~~l~~LLrf~ss~~~~~~~SL~eYv~rmke~Qk~IYYitg~s~~~~~~sp~lE~~k~kg~EVL~l~d~iDe~ 236 (288)
T 1hk7_A 157 VHEDTQNRAALAKLLRYNSTKSVDELTSLTDYVTRMPEHQKNIYYITGESLKAVEKSPFLDALKAKNFEVLFLTDPIDEY 236 (288)
T ss_dssp HHHCTTTHHHHHTTCCBEESSCSSSCBCHHHHHHHSCTTCCEEEEEECSSHHHHHTCGGGHHHHTTTCCCEEECSHHHHH
T ss_pred HCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEECCCHHHHHCCHHHHHHHHCCCEEEEECCCHHHH
T ss_conf 42568789999987322034678872619999863767886599996888788861879999997798799966706899
Q ss_pred HHHHHHHCCCCCEEECCCCCCCCCCCCHHHH--HHHHHHHHHHHHHHHHHHCC
Q ss_conf 9997631069735762255457687716778--86368798799999977089
Q 003713 596 AVQNLKSYKEKNFVDISKEDLDLGEKNEEKE--KVMKEEFGQTCDWIKKRLGD 646 (801)
Q Consensus 596 ~l~~L~~f~gk~fvsV~k~~l~l~~~~e~~~--~~~~~ef~~L~~~lKe~Lg~ 646 (801)
|+++|.+|+|++|+||+++ ++|++.+++++ ++.+++|++||+|||+.||+
T Consensus 237 ~i~~L~e~~gk~~~sv~k~-~~l~~~~eek~~~e~~~~~~~~L~~~~K~~L~~ 288 (288)
T 1hk7_A 237 AFTQLKEFEGKTLVDITKD-FELEETDEEKAEREKEIKEYEPLTKALKEILGD 288 (288)
T ss_dssp HHHHHCEETTEEEEETTTC----------------------------------
T ss_pred HHHHHHHCCCCEEEECCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 9752664189326630234-554420234455677798999999999987378
No 9
>2gq0_A Chaperone protein HTPG; molecular chaperone, HSP90, E. coli, hydrolase; 1.90A {Escherichia coli}
Probab=1.00 E-value=1 Score=697.26 Aligned_cols=290 Identities=42% Similarity=0.711 Sum_probs=277.7
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEEE
Q ss_conf 89883259999998999999999706899984023210255301379998408999997655678776818996447740
Q 003713 356 TQPIWLRNPKEVTTEEYNEFYKKTFNEYLDPLASSHFTTEGEVEFRSILYVPAVAPMGKDDLINPKTKNIRLYVKRVFIS 435 (801)
Q Consensus 356 ~~plW~r~~~~v~~eey~~fyk~~~~~~~~pl~~~h~~~eg~~~~~~llyiP~~~p~~~~~~~~~~~~~i~LYv~rVfI~ 435 (801)
++|||+|+|++|++|||.+|||+++++|++||+|+||++||+++|+||||||+++|+++|+. ..+++|+||||||||+
T Consensus 2 ~~plW~r~~~eit~EeY~eFYk~l~~d~~dPL~~iH~~vEg~~~~~~lLyiP~~ap~dl~~~--~~~~~ikLYvrrVfI~ 79 (303)
T 2gq0_A 2 AQALWTRNKSEITDEEYKEFYKHIAHDFNDPLTWSHNRVEGKQEYTSLLYIPSQAPWDMWNR--DHKHGLKLYVQRVFIM 79 (303)
T ss_dssp CCCGGGSCGGGSCHHHHHHHHHHHHTCCSCCSEEEEEEECSSSCEEEEEEECSSCCTTTTST--TCCCSEEEEETTEEEE
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCHHHHH--HCCCCEEEEEECEEEE
T ss_conf 98875789330899999999998728852750468850366551558999469887003323--0258828997023852
Q ss_pred CCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC
Q ss_conf 48998977212234003631899998636776404599999999999999999996520379688999999996885231
Q 003713 436 DDFDGELFPRYLSFVKGVVDSNDLPLNVSREILQESRIVRIMRKRLVRKAFDMILGISMSENRADYEKFWENFGKYLKMG 515 (801)
Q Consensus 436 d~~~~~llP~~l~FvkGVVDS~DLpLNvSRE~LQ~~~~l~~I~k~i~~ki~~~l~~la~~~d~e~y~~f~~~fg~~lK~G 515 (801)
|+|+ +|||+||+||||||||+|||||||||+||+|+++++|+++|++|++++|.++++ +|+|+|++||++||.+||+|
T Consensus 80 D~~e-eLlP~yL~FvkGVVDS~DLPLNvSRE~LQ~~~~lk~Irk~l~kKvl~~L~~la~-~d~e~Y~kF~~~fg~~lK~G 157 (303)
T 2gq0_A 80 DDAE-QFMPNYLRFVRGLIDSSDLPLNVSREILQDSTVTRNLRNALTKRVLQMLEKLAK-DDAEKYQTFWQQFGLVLKEG 157 (303)
T ss_dssp EEEG-GGSCGGGTTCEEEEEESSSCTTCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH-HCHHHHHHHHHHHHHHHTTH
T ss_pred CCHH-HHCHHHHHHHHCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH-CCHHHHHHHHHHHHHHHHHH
T ss_conf 6645-556488877610155256786436676534589999999999999999999974-08999999999987887436
Q ss_pred CCCCCCCHHHCCCCCCEEECCCC--CCCCCHHHHHHHCCCCCCCEEEEECCCHHHHHCCHHHHHHHHCCCEEEEECCCCC
Q ss_conf 45782173100483110213589--9411687888604889960999926899899538669997417946999459862
Q 003713 516 CIDDRENHKPLAPLLRFFSSQSE--DEMISLDEYVENMKPEQKDIYFIAADSVASARNTPFLEKLLEKDLEVLYLVDPID 593 (801)
Q Consensus 516 ~~eD~~n~e~i~~LLrF~Ss~~~--~~~~SL~eYv~rmke~Qk~IYY~~~~s~~~~~~sp~~E~~~~kg~eVL~l~dpiD 593 (801)
+++|..|+++|++||||+||+++ ++++||+||++||+++|+.|||++|+|++++++|||+|.|++||||||||++|||
T Consensus 158 i~eD~~nr~~l~~LLrF~Ss~~~~~~~~~SL~eYv~rmke~Qk~IYYitg~s~~~~~~sp~lE~~k~kG~EVL~l~d~iD 237 (303)
T 2gq0_A 158 PAEDFANQEAIAKLLRFASTHTDSSAQTVSLEDYVSRMKEGQEKIYYITADSYAAAKSSPHLELLRKKGIEVLLLSDRID 237 (303)
T ss_dssp HHHCGGGHHHHHTTCCBEETTTTCCCCCBCHHHHHHTCCTTCCSEEEEECSSHHHHHTCGGGHHHHHHTCCEEEECSTTH
T ss_pred HHCCHHHHHHHHHHHEEEECCCCCCCCEEEHHHHHHHCCCCCCEEEEEECCCHHHHHCCHHHHHHHHCCCEEEEECCHHH
T ss_conf 63488889999985463105777667725399999753467865999958889998629088999877975998476569
Q ss_pred HHHHHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEE--EEEECCCCCCCCEEEEEC
Q ss_conf 89999763106973576225545768771677886368798799999977089505--998102588997599816
Q 003713 594 EIAVQNLKSYKEKNFVDISKEDLDLGEKNEEKEKVMKEEFGQTCDWIKKRLGDKVA--SVQISNRLSSSPCVLVSA 667 (801)
Q Consensus 594 E~~l~~L~~f~gk~fvsV~k~~l~l~~~~e~~~~~~~~ef~~L~~~lKe~Lg~kV~--~V~vS~RL~ssP~~iv~~ 667 (801)
|+|+++|.+|+|++|++|++++++|++.+ ++.||++|. +|.+|+||+|||||+++.
T Consensus 238 e~~i~~L~e~~gk~f~sV~k~~l~l~~~~------------------~~~l~~~~~~~~~~~~~~~~s~~~~~~~~ 295 (303)
T 2gq0_A 238 EWMMNYLTEFDGKPFQSVSKVDESLEKLA------------------DGDLGTLVPRGSMAISDPNSSSVDKLAAA 295 (303)
T ss_dssp HHHTTTCCEETTEEEEETTC--------------------------------------------------------
T ss_pred HHHHHHHHHCCCCCEEEEECCCCCCCCCC------------------HHHHCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 99999997528961598304556743212------------------35650546667754467677626899988
No 10
>3pry_A Heat shock protein HSP 90-beta; structural genomics, structural genomics consortium, SGC, HE protein, chaperone; 2.28A {Homo sapiens} SCOP: d.14.1.8
Probab=1.00 E-value=1 Score=666.47 Aligned_cols=264 Identities=47% Similarity=0.874 Sum_probs=256.2
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEE
Q ss_conf 46898832599999989999999997068999840232102553013799984089999976556787768189964477
Q 003713 354 NETQPIWLRNPKEVTTEEYNEFYKKTFNEYLDPLASSHFTTEGEVEFRSILYVPAVAPMGKDDLINPKTKNIRLYVKRVF 433 (801)
Q Consensus 354 N~~~plW~r~~~~v~~eey~~fyk~~~~~~~~pl~~~h~~~eg~~~~~~llyiP~~~p~~~~~~~~~~~~~i~LYv~rVf 433 (801)
|+++|||+|+|++||+|||.+|||+++++|++||+|+||++||+++|+||||||+++|+++|+. ...+++|+|||||||
T Consensus 1 ~~~~plW~r~~~eit~EeY~eFYk~l~~d~~dPL~~iH~~veg~~~~~~lLyiP~~ap~d~~~~-~~~~~~ikLYv~rVf 79 (268)
T 3pry_A 1 MKTKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIPRRAPFDLFEN-KKKKNNIKLYVRRVF 79 (268)
T ss_dssp -CCSCGGGSCGGGCCHHHHHHHHHHHHCCSSCCSEEEEEEECSSSCEEEEEEECSSCCC---------CCCEEEEETTEE
T ss_pred CCCCCCCCCCHHHCCHHHHHHHHHHHCCCCCCCHHEEEECCCCCEEEEEEEECCCCCCHHHHHH-HHHCCCEEEEEEEEE
T ss_conf 9988777889045999999999998538843761115523567714779997368784223300-331478069988878
Q ss_pred EECCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Q ss_conf 40489989772122340036318999986367764045999999999999999999965203796889999999968852
Q 003713 434 ISDDFDGELFPRYLSFVKGVVDSNDLPLNVSREILQESRIVRIMRKRLVRKAFDMILGISMSENRADYEKFWENFGKYLK 513 (801)
Q Consensus 434 I~d~~~~~llP~~l~FvkGVVDS~DLpLNvSRE~LQ~~~~l~~I~k~i~~ki~~~l~~la~~~d~e~y~~f~~~fg~~lK 513 (801)
|+|+|+ +|||+||+||||||||+|||||||||+||+|+++++|+++|++|++++|.+++ +|+|+|++||++||.+||
T Consensus 80 I~d~~~-ellP~yL~FvkGVVDS~DLPLNVSRE~LQ~~~~lk~I~k~i~kkvl~~l~~la--~d~e~Y~~f~~~fg~~lK 156 (268)
T 3pry_A 80 IMDSCD-ELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRKNIVKKCLELFSELA--EDKENYKKFYEAFSKNLK 156 (268)
T ss_dssp EESCCG-GGSCGGGTTCEEEEEESSSCSSCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHH--TSHHHHHHHHHHHHHHHH
T ss_pred EECCHH-HHCCCHHHHEEEEECCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHH--HCHHHHHHHHHHHHHHHH
T ss_conf 606512-21600134337783377788621588863479999999999999999999997--599999999999879988
Q ss_pred HCCCCCCCCHHHCCCCCCEEECCCCCCCCCHHHHHHHCCCCCCCEEEEECCCHHHHHCCHHHHHHHHCCCEEEEECCCCC
Q ss_conf 31457821731004831102135899411687888604889960999926899899538669997417946999459862
Q 003713 514 MGCIDDRENHKPLAPLLRFFSSQSEDEMISLDEYVENMKPEQKDIYFIAADSVASARNTPFLEKLLEKDLEVLYLVDPID 593 (801)
Q Consensus 514 ~G~~eD~~n~e~i~~LLrF~Ss~~~~~~~SL~eYv~rmke~Qk~IYY~~~~s~~~~~~sp~~E~~~~kg~eVL~l~dpiD 593 (801)
+|+++|..|+++|++||||+||+++++++||+||++||+++|+.|||++|+|++++++|||+|.+++||||||||+||||
T Consensus 157 ~G~~eD~~~~~~l~~LLrf~ss~~~~~~~SL~eYv~rmke~Q~~IyYitg~s~~~~~~sp~~E~~k~kg~EVL~l~d~iD 236 (268)
T 3pry_A 157 LGIHEDSTNRRRLSELLRYHTSQSGDEMTSLSEYVSRMKETQKSIYYITGESKEQVANSAFVERVRKRGFEVVYMTEPID 236 (268)
T ss_dssp HHHHHCGGGHHHHHHTCEEEETTTTTSCEEHHHHHHTSCTTCCEEEEECSCCHHHHHTCHHHHHHHTTTCCEEECCSTTH
T ss_pred HHHHCCHHHHHHHHHHHEEEECCCCCCCEEHHHHHHHCCCCCCEEEEEECCCHHHHHHCHHHHHHHHCCCEEEEECCCHH
T ss_conf 67607797899999875643025898628499999754467864999958999999738699999975965999478438
Q ss_pred HHHHHHHHHCCCCCEEECCCCCCCCCCC
Q ss_conf 8999976310697357622554576877
Q 003713 594 EIAVQNLKSYKEKNFVDISKEDLDLGEK 621 (801)
Q Consensus 594 E~~l~~L~~f~gk~fvsV~k~~l~l~~~ 621 (801)
|+|+++|.+|+||+|+||++++++|++.
T Consensus 237 e~~i~~L~ef~gk~l~sv~k~~l~l~e~ 264 (268)
T 3pry_A 237 EYCVQQLKEFDGKSLVSVTKEGLELAEN 264 (268)
T ss_dssp HHHHHHHCEETTEEEEETTCSSCCCCCC
T ss_pred HHHHHHHHHCCCCEEEECCCCCCCCCCC
T ss_conf 9999998751896543024145788501
Done!