BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003717
(800 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|296081053|emb|CBI18334.3| unnamed protein product [Vitis vinifera]
Length = 847
Score = 345 bits (884), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 199/413 (48%), Positives = 260/413 (62%), Gaps = 49/413 (11%)
Query: 14 TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKGRSFGYVDFFPSSHKSLSKLFSTY 73
TRI+VGGLGE VT DD+ K+ SSLG VK VDI+RTKGRSF Y+DF PSS KSLSKLFSTY
Sbjct: 184 TRIFVGGLGETVTSDDINKMLSSLGTVKVVDIMRTKGRSFAYLDFLPSSAKSLSKLFSTY 243
Query: 74 NGCVWKGGRLRLERAKEHYLARLKREWAEDDAQLVNPPVTDSVAPDNKDATRLDTPKKLL 133
NGC WKGGRL+LE+AKEHYL RL REWAED ++ P ++S+ N + D KK +
Sbjct: 244 NGCFWKGGRLKLEKAKEHYLVRLSREWAEDGELAISQP-SNSI-DKNTNIVASDKLKKTV 301
Query: 134 DKDK-KLNIFFPRLRKVKTLPFCGTGKHKYSFQRVEAPPLPKYFCDCEEHSAAFHAAEGK 192
+++K +L IFFP+LRK+K+LPF GTGKHKYSFQR+E P LP +FCDCEEHS H A+ +
Sbjct: 302 NQEKSQLRIFFPKLRKMKSLPFSGTGKHKYSFQRIEVPSLPTHFCDCEEHSGPPHIAQKQ 361
Query: 193 QIHHPAAGQEEIHDMEELGASVINEEELNLMNSVMNKLFERENVSNAGLSGTELTNYERN 252
P E + +N++ELN+MNSVMNK+FERE T+L +
Sbjct: 362 YFCDP-----------ESQSGGMNKDELNVMNSVMNKIFERE---------TDLKD---- 397
Query: 253 SYNFIGDLQIGGNEVDSVADEYNLVINAVSGGNNRMVLSRCQEKTTILPTNKKLTLSEAR 312
+L++ GNE D V DE NLVIN + G +RM L QE+ I N+K ++
Sbjct: 398 ------ELRVDGNESDLVEDEDNLVINMFT-GRHRMALLGSQEQEAI-SMNQKSRFNDTW 449
Query: 313 TSKDRSAQ-SLPREQKKNDLLRSKKRKSLHNDEI----LMAASPLDDMNVQTNMNKPSTP 367
TS D A +LP +KKRKSLH DE ++A P ++QT+ N
Sbjct: 450 TSTDGPAPITLP---------STKKRKSLHIDESDGNEFLSAIPGKKPSLQTHSNDSGVQ 500
Query: 368 LATQHAETDSGVRKSTASHSWSQKMSWKALVGDKDSRAFSVSNILPSDASTEE 420
Q +E G++K+TA+ SWSQK SW+ LVGDK + F +S++LP S ++
Sbjct: 501 SGAQTSELRPGIQKTTANLSWSQKSSWRELVGDKGNNPFIISDMLPGVGSRKQ 553
Score = 183 bits (464), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 139/368 (37%), Positives = 205/368 (55%), Gaps = 27/368 (7%)
Query: 429 EELNFDENESD------DLMINVVSKKKPKMALSSSQKWETTSTTYRKSVSNEDNNTTKD 482
+EL D NESD +L+IN+ + + +MAL SQ+ E S + ++ +T
Sbjct: 397 DELRVDGNESDLVEDEDNLVINMFTGRH-RMALLGSQEQEAISMNQKSRFNDTWTSTDGP 455
Query: 483 RPIQQEKSTLPSKKKRKSVIDDESDKNKSVHTVPETDGCAQTYT-ESQMPTGPQLVEPES 541
PI TLPS KKRKS+ DESD N+ + +P QT++ +S + +G Q E
Sbjct: 456 API-----TLPSTKKRKSLHIDESDGNEFLSAIPGKKPSLQTHSNDSGVQSGAQTSELRP 510
Query: 542 VVEQSISDHSESKKPSQRVVIGSKGNDESSVSNVLPDNSAKEEQRVFDCPDEPLGSTDSK 601
++++ ++ S S+K S R ++G KGN+ +S++LP ++++++V DSK
Sbjct: 511 GIQKTTANLSWSQKSSWRELVGDKGNNPFIISDMLPGVGSRKQEQVKSDGRNVHDIIDSK 570
Query: 602 NQNSLARNENLEGKLAETESVEVPAKAQPSKSNTAPNKSGKGSSWFQKSPWTQLVNEDN- 660
QN L ENLE + + + +E A+AQP + SG+G+SW QKS WTQLV+E N
Sbjct: 571 KQN-LVNYENLEAQSGKLKGLEGLAEAQPPIPDGVVKSSGRGASWLQKSSWTQLVSEANT 629
Query: 661 SSFSITQISPGITFKKHDVPKTQLGKEVANPNDKKSSKSVGQAGSKPITCASTALEDGKK 720
SSFSI+QI PGI +K +PK ++ + SS S KP T S + DG +
Sbjct: 630 SSFSISQILPGIPLEKQKLPK------FSDVDLAVSSGSKHHDQVKPHT--SETIRDGNE 681
Query: 721 GEIVSQIIPEKNQPTDVGDNEASASMVADKHDLTPRQTTNVDGTIGETCSFMRSAASIKE 780
+ PEK +G+NE SA + K + P+QT+ D IGETCSFMR+AAS+KE
Sbjct: 682 K---LESTPEKGVQM-IGNNEVSARTLRKKPHIGPKQTSIKDVKIGETCSFMRTAASVKE 737
Query: 781 WSTAKAAL 788
WS KAAL
Sbjct: 738 WSKTKAAL 745
>gi|255563870|ref|XP_002522935.1| conserved hypothetical protein [Ricinus communis]
gi|223537829|gb|EEF39446.1| conserved hypothetical protein [Ricinus communis]
Length = 636
Score = 336 bits (862), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 196/415 (47%), Positives = 269/415 (64%), Gaps = 43/415 (10%)
Query: 13 QTRIYVGGLGEKVTDDDLAKVFSSLG-EVKAVDIVRTKGRSFGYVDFFPSSHKSLSKLFS 71
+ RI+VGGLGE VT DDL + S +G ++VDI+RTKGRSF Y+DF PSS +L KLF+
Sbjct: 13 RVRIHVGGLGENVTRDDLCNLLSKVGIGFQSVDIIRTKGRSFAYIDFLPSSVSALPKLFN 72
Query: 72 TYNGCVWKGGRLRLERAKEHYLARLKREWAEDDAQLVNPPVTDSVAPDNKDATR-LDTPK 130
TYNGCVWKGGRL+L++AKEHYL RLKREWAE DAQL N +D V N DA + +++P+
Sbjct: 73 TYNGCVWKGGRLKLDKAKEHYLDRLKREWAE-DAQLANSTCSDDV---NNDADKQMESPR 128
Query: 131 KL-----LDKDKKLNIFFPRLRKVKTLPFCGTGKHKYSFQRVEAPPLPKYFCDCEEHSAA 185
K LDK K+L +FFPRL+K+K++PF GTGKHKYSF+RVE P LP +FCDCEEHS +
Sbjct: 129 KTKKDLSLDK-KQLRLFFPRLQKLKSIPFSGTGKHKYSFRRVEVPSLPLHFCDCEEHSGS 187
Query: 186 FHAAEGKQIHHPAAGQEEIHDMEELGASVINEEELNLMNSVMNKLFERENVSNAGLSGTE 245
HA +GKQI P +EE G V N+EEL+LM SVMN+LFE ENVS A S E
Sbjct: 188 LHAPKGKQI--PV--------LEEQGGGV-NQEELDLMISVMNRLFEIENVSGAPHSDNE 236
Query: 246 LTNYERNSYNFIGDLQIGGNEVDSVADEYNLVINAVSGGNNRMVLSRCQEKTTILPTNKK 305
LT E + N + Q+ +E S ADE +L+IN VS + K T +N++
Sbjct: 237 LTKEEDYNTNATDNPQLDESEGYSTADEDDLIINVVS-----------RRKETAF-SNQE 284
Query: 306 LTLSEARTSKDRSAQSLPREQKKNDLLRSKKRKSLHNDEILMAASPLDDMNVQTNMNKPS 365
L++ + S+DR AQ + R++ +ND +++ N+ + +A+ ++Q N P
Sbjct: 285 SKLNKRQASEDRPAQEVLRKRTRND------KENDTNNYVSVASQ--GKGSLQAPSNGPG 336
Query: 366 TPLATQHAETDSGVRKSTASHSWSQKMSWKALVGDKDSRAFSVSNILPSDASTEE 420
Q E+ S V++S SWSQK SW+ LVG++++ A S+S+ILP ++ +E
Sbjct: 337 MLSGDQLIESQSIVKQSAPGVSWSQKSSWRELVGNRNNNAISISDILPGISANKE 391
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 138/445 (31%), Positives = 215/445 (48%), Gaps = 77/445 (17%)
Query: 404 RAFSVSNILPSDAS----TEEADNGINSFEELNFDENES------DDLMINVVSKKKPKM 453
R F + N+ + S T+E D N+ + DE+E DDL+INVVS++K
Sbjct: 220 RLFEIENVSGAPHSDNELTKEEDYNTNATDNPQLDESEGYSTADEDDLIINVVSRRKE-- 277
Query: 454 ALSSSQKWETTSTTYRKSVSNEDNNTTKDRPIQQEKSTLPSKKKRKSVIDDESDKNKSVH 513
T+ + ++S N+ ++DRP Q+ + K+ R D E+D N V
Sbjct: 278 ----------TAFSNQESKLNK-RQASEDRPAQE----VLRKRTRN---DKENDTNNYVS 319
Query: 514 TVPETDGCAQTYTES-QMPTGPQLVEPESVVEQSISDHSESKKPSQRVVIGSKGNDESSV 572
+ G Q + M +G QL+E +S+V+QS S S+K S R ++G++ N+ S+
Sbjct: 320 VASQGKGSLQAPSNGPGMLSGDQLIESQSIVKQSAPGVSWSQKSSWRELVGNRNNNAISI 379
Query: 573 SNVLPDNSAKEEQRVFDCPDEPLGSTDSKNQNSLARNENLEGKLAETESVEVPAKAQPSK 632
S++LP SA +E+ L S KN+ L ++EN G+L + E VE A+AQ +K
Sbjct: 380 SDILPGISANKEEETKSAA--TLNSNKGKNK-ELLKHENQRGQLDKAE-VEGLAEAQDTK 435
Query: 633 SNTAPNKSGKGSSWFQKSPWTQLVNEDNSSFS-ITQISPGITFKKHDVPKTQLGKEVANP 691
+ A +K+G+GS+W K+ WTQLVN NS+ ITQI PG+TF KH+ K+ G +A+
Sbjct: 436 MDFASDKAGRGSAWLHKASWTQLVNSSNSNSFSITQILPGVTFDKHEPAKSD-GDIIADS 494
Query: 692 NDKKSSKSVGQAGSKPITCASTA-LEDGKKGEIVSQIIPEKNQPTDVGDNEASASMVADK 750
K +V + G +T T G+ G V++ PE ++ +G+N SA
Sbjct: 495 RGFKHGDTV-ETGKNELTIDGTRDFRVGRDG--VAKETPESSRLIVIGNNNTSAPTKDRS 551
Query: 751 HDLTPRQTTNVDG------------------------------------TIGETCSFMRS 774
+ +T + + V TIGET FMR+
Sbjct: 552 YPVTEEKGSGVVAIDETHLYMRTEESNTNTSPPTEIKNNSATKEKGGVVTIGETRPFMRT 611
Query: 775 AASIKEWSTAKAALSGSQSHKRKSH 799
S+KEW+ +AALSGS+ K
Sbjct: 612 EESVKEWANIRAALSGSRKRTSKGQ 636
>gi|147769592|emb|CAN65705.1| hypothetical protein VITISV_001744 [Vitis vinifera]
Length = 654
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 197/429 (45%), Positives = 256/429 (59%), Gaps = 53/429 (12%)
Query: 14 TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKGRSFGYVDFFPSSHKSLSKLFSTY 73
TRI+VGGLGE VT DD+ K+ SSLG VK VDIVRTKGRSF Y+DF PSS KSLSKLFST
Sbjct: 21 TRIFVGGLGETVTSDDINKMLSSLGTVKVVDIVRTKGRSFAYLDFLPSSAKSLSKLFST- 79
Query: 74 NGCVWKGGRLRLERAKEHYLARLKREWAEDDAQLVNPPVTDSVAPDNKDATRLDTPKKLL 133
GGRL+LE+AKEHYL RL REWAED ++ P ++S+ N + D KK +
Sbjct: 80 ------GGRLKLEKAKEHYLVRLSREWAEDGELAISQP-SNSI-DKNTNIVSSDKLKKTV 131
Query: 134 DKDK-KLNIFFPRLRKVKTLPFCGTGKHKYSFQRVEAPPLPKYFCDCEEHSAAFHAAEGK 192
+++K +L IFFP+LRK+K+LPF GTGKHKYSFQR+E P LP +FCDCEEHS H A+ +
Sbjct: 132 NQEKSQLRIFFPKLRKMKSLPFSGTGKHKYSFQRIEVPSLPTHFCDCEEHSGPPHIAQKQ 191
Query: 193 QIHHPAAGQEEIHDMEELGASVINEEELNLMNSVMNKLFERENVSNAGLSGTELTNYERN 252
P E + +N++ELN+MNSVMNK+FERE + T LT +
Sbjct: 192 YFCDP-----------EPQSGGMNKDELNMMNSVMNKIFERETDLKVAYNVTGLTKGGHD 240
Query: 253 SY-----NFIGD-----------LQIGGNEVDSVADEYNLVINAVSGGNNRMVLSRCQEK 296
S I D L++ GNE D DE NLVIN + G +RM L QE+
Sbjct: 241 SLKSTNERLIDDNESDHAADEDELRVDGNESDLAEDEDNLVINMFT-GRHRMALLGSQEQ 299
Query: 297 TTILPTNKKLTLSEARTSKDRSAQ-SLPREQKKNDLLRSKKRKSLHNDEI----LMAASP 351
I N+K ++ TS D A +LP +KKRKSLH DE ++A P
Sbjct: 300 EAI-SMNQKSRFNDTWTSTDGPAPITLP---------STKKRKSLHIDESDGNEFLSAIP 349
Query: 352 LDDMNVQTNMNKPSTPLATQHAETDSGVRKSTASHSWSQKMSWKALVGDKDSRAFSVSNI 411
++QT+ N Q +E G++K+TA+ SWSQK SW+ LVGDK + F +S++
Sbjct: 350 GKKPSLQTHSNDSGVQSGAQTSELRPGIQKTTANLSWSQKSSWRELVGDKGNNPFIISDM 409
Query: 412 LPSDASTEE 420
LP S ++
Sbjct: 410 LPGVGSRKQ 418
Score = 185 bits (470), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 144/389 (37%), Positives = 211/389 (54%), Gaps = 34/389 (8%)
Query: 429 EELNFDENESD------DLMINVVSKKKPKMALSSSQKWETTSTTYRKSVSNEDNNTTKD 482
+EL D NESD +L+IN+ + + +MAL SQ+ E S + ++ +T
Sbjct: 262 DELRVDGNESDLAEDEDNLVINMFTGRH-RMALLGSQEQEAISMNQKSRFNDTWTSTDGP 320
Query: 483 RPIQQEKSTLPSKKKRKSVIDDESDKNKSVHTVPETDGCAQTYT-ESQMPTGPQLVEPES 541
PI TLPS KKRKS+ DESD N+ + +P QT++ +S + +G Q E
Sbjct: 321 API-----TLPSTKKRKSLHIDESDGNEFLSAIPGKKPSLQTHSNDSGVQSGAQTSELRP 375
Query: 542 VVEQSISDHSESKKPSQRVVIGSKGNDESSVSNVLPDNSAKEEQRVFDCPDEPLGSTDSK 601
++++ ++ S S+K S R ++G KGN+ +S++LP ++++++V DSK
Sbjct: 376 GIQKTTANLSWSQKSSWRELVGDKGNNPFIISDMLPGVGSRKQEQVKSDGRNVHDIIDSK 435
Query: 602 NQNSLARNENLEGKLAETESVEVPAKAQPSKSNTAPNKSGKGSSWFQKSPWTQLVNEDN- 660
QN L ENLE + + + +E A+AQP + SG+G+SW QKS WTQLV+E N
Sbjct: 436 KQN-LVNYENLEAQSGKLKGLEGLAEAQPPIPDGVVKSSGRGASWLQKSSWTQLVSEANT 494
Query: 661 SSFSITQISPGITFKKHDVPKTQLGKEVANPNDKKSSKSVGQAGSKPITCASTALEDGKK 720
SSFSI+QI PGI F+K +PK ++A + K V S+ I + LE GK
Sbjct: 495 SSFSISQILPGIPFEKQKLPKFS-DVDLAVSSGSKHHDQVKPHTSETIRDGNEKLEVGKG 553
Query: 721 GEIVSQ--------------IIPEKNQPTD----VGDNEASASMVADKHDLTPRQTTNVD 762
S + EK+ P +G+NE SA + K + P+QT+ D
Sbjct: 554 FTTTSSSDMVALDEEHNFVDLDVEKSTPEKGVQMIGNNEVSARTLRKKPHIGPKQTSIKD 613
Query: 763 GTIGETCSFMRSAASIKEWSTAKAALSGS 791
IGETCSFMR+AAS+KEWS KAALSGS
Sbjct: 614 VKIGETCSFMRTAASVKEWSKTKAALSGS 642
>gi|356530527|ref|XP_003533832.1| PREDICTED: uncharacterized protein LOC100778779 [Glycine max]
Length = 615
Score = 285 bits (729), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 181/416 (43%), Positives = 247/416 (59%), Gaps = 44/416 (10%)
Query: 5 EAEAEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKGRSFGYVDFFPSSHK 64
EAE E + RI+VGGL E V+ +DL +F+SLG V++V +RTKGRSF Y+DF S K
Sbjct: 4 EAE-ETKSAARIFVGGLAEAVSAEDLRSLFASLGSVQSVQTIRTKGRSFAYLDFL-SDPK 61
Query: 65 SLSKLFSTYNGCVWKGGRLRLERAKEHYLARLKREWAE---DDAQLVNPP--VTDSVAPD 119
SLSKLFS YNGC+WKGGRLRLE+AKE YL RLKREW + DDA PP ++ P+
Sbjct: 62 SLSKLFSKYNGCLWKGGRLRLEKAKEDYLVRLKREWEQGTLDDA-TQKPPTAASEEEMPN 120
Query: 120 NKDATRLDTPKKLLDKDKKLNIFFPRLRKVKTLPFCGTGKHKYSFQRVEAPPLPKYFCDC 179
+++ +T K LNIFFPRLRKVK++PF GTGKHKYSFQ ++ PPLP +FCDC
Sbjct: 121 TAQSSKSNT--------KHLNIFFPRLRKVKSIPFSGTGKHKYSFQNIKVPPLPVHFCDC 172
Query: 180 EEHSAAFHAAEGKQIHHPAAGQEEIHDMEELGASVINEEELNLMNSVMNKLFERENVSNA 239
EEH F P + I E G IN+EE+++MN+VMNKLFE+E VSNA
Sbjct: 173 EEHCKPF---------VPEREKLSIDRTAESGG--INDEEISIMNAVMNKLFEKEQVSNA 221
Query: 240 GLSGTELTNYERNSYNFIGDLQIGGNEVDSVADEYNLVINAVSGGNNRMVLSRCQEKTTI 299
G E ++E + + DS DE +L+IN V N+ L+ +E I
Sbjct: 222 KNLGEEKDSFESPDALHSDECE------DSATDEDDLIIN-VETKKNKTSLTEDKELQRI 274
Query: 300 LPTNKKLTLSEARTSKDRSAQSLPREQKKNDLL--RSKKRKSLHNDEILMAASPLDDMNV 357
L N++ ++ + +K+ +S QK+++ ++KKRKSL E+ + +P N+
Sbjct: 275 L-ENQESWFNKRKIAKEEPNKSTLLVQKRSNSNPDKNKKRKSLPKLEV--STTPGSKSNM 331
Query: 358 QTNMNKPSTPLATQHAETDSGVRKSTASHSWSQKMSWKALVGDKDSRAFSVSNILP 413
QT ++ + E D G + SWSQK SW+ L+GDK + +FS S ILP
Sbjct: 332 QTLPDEVGSDAQPTELEDDFGEKV-----SWSQKSSWRELLGDKGNTSFSASLILP 382
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 133/375 (35%), Positives = 198/375 (52%), Gaps = 47/375 (12%)
Query: 439 DDLMINVVSKKKPKMALSSSQKWETTSTTYRKSVSNEDNNTTKDRPIQQE--KSTLPSKK 496
DDL+INV +KK K +L T ++ + N+++ K + ++E KSTL +K
Sbjct: 250 DDLIINVETKKN-KTSL-------TEDKELQRILENQESWFNKRKIAKEEPNKSTLLVQK 301
Query: 497 KRKSVIDDESDKNKSVHTVPETDGCAQTYTESQMPTGPQLVEPESVVEQSISDHSE---- 552
+ S DKNK ++P+ + ++S M T P V ++ + D E
Sbjct: 302 RSNS----NPDKNKKRKSLPKLEVSTTPGSKSNMQTLPDEVGSDAQPTELEDDFGEKVSW 357
Query: 553 SKKPSQRVVIGSKGNDESSVSNVLPDNSAKEEQRVFDCPDEPLGSTDSKNQNSLARNENL 612
S+K S R ++G KGN S S +LP + E Q+ D P+ ST++K +N + R+ +L
Sbjct: 358 SQKSSWRELLGDKGNTSFSASLILPKLDSGESQQRSDDQSAPV-STNNKTEN-MERDGHL 415
Query: 613 EGKLAETESVEVPAKAQPS-----------KSNTAPNKSGKGSSWFQKSPWTQLVNEDNS 661
K A+ +E A+AQP+ K N APNK+G+G+SW QK WTQ+V ++N+
Sbjct: 416 GSKPADAPVIEEHAEAQPTNKQVIEDVANNKHNVAPNKTGRGASWLQKQSWTQMVGQNNN 475
Query: 662 SFSITQISPGITFKKHDVPKTQLGKEVANPNDKKSSKSVGQA-GSKPITCASTALEDGKK 720
SFSI+ I PGITF P+ + + P K G A + + C DG
Sbjct: 476 SFSISNILPGITF-----PEPMAKEAIMEPAISNDCKHNGVAKDTVNVVC------DGFN 524
Query: 721 GEIVSQIIPEKNQPTDVGDNEASASMVADKHDLTPRQTTNVDGTIGETCSFMRSAASIKE 780
+ IP K+Q T D ASAS+ +K + +PR+ + + IGETCSFMRSAAS+KE
Sbjct: 525 SR---ETIPGKSQHTSANDI-ASASVGEEKGETSPREKSTENVEIGETCSFMRSAASLKE 580
Query: 781 WSTAKAALSGSQSHK 795
W+ AKAA+SGS K
Sbjct: 581 WAKAKAAMSGSLKRK 595
>gi|357450429|ref|XP_003595491.1| hypothetical protein MTR_2g048340 [Medicago truncatula]
gi|124360045|gb|ABN08061.1| RNA-binding region RNP-1 (RNA recognition motif);
Pyridoxal-dependent decarboxylase [Medicago truncatula]
gi|355484539|gb|AES65742.1| hypothetical protein MTR_2g048340 [Medicago truncatula]
Length = 660
Score = 278 bits (712), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 171/438 (39%), Positives = 253/438 (57%), Gaps = 33/438 (7%)
Query: 1 MEKKEAEAEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKGRSFGYVDFFP 60
ME++E+E RI+VGG+GE VT DD+ ++F SLG V++++ +RTKGRS Y+DF
Sbjct: 1 MEEEESEKRT---VRIFVGGIGEAVTSDDIRRLFESLGSVQSLETIRTKGRSLAYLDFLA 57
Query: 61 SSHKSLSKLFSTYNGCVWKGGRLRLERAKEHYLARLKREWAEDDAQLVNPPVTDSVAPDN 120
S KSLSKLFS YNGCVWKGG+L+LE+AKEHYL RLK+EW ED + PP +D V+
Sbjct: 58 DS-KSLSKLFSKYNGCVWKGGKLKLEKAKEHYLDRLKKEWEEDAILSIEPPASD-VSTHK 115
Query: 121 KDATRLDTP--KKLLDKDKK-LNIFFPRLRKVKTLPFCGTGKHKYSFQRVEAPPLPKYFC 177
+D + + P ++++D D K LNI+FPRLR VK++PF GTGKHKYSFQ ++ PLP +FC
Sbjct: 116 EDLVK-EKPNARRIVDPDAKPLNIYFPRLRTVKSIPFSGTGKHKYSFQNIKVGPLPVHFC 174
Query: 178 DCEEHSAAFHAAEGKQIHHPAAGQEEIHDMEELGASVINEEELNLMNSVMNKLFERENVS 237
DCEEH + F + K + E + E+G IN+EE+N+MN+VMNKL E+E VS
Sbjct: 175 DCEEHCSPFITKKEKL----SMNGETEREKSEIGG--INDEEINIMNAVMNKLLEKEKVS 228
Query: 238 NAGLSGTELTNYERNSYNFIGDLQIGGNEVDSVADEYNLVINAVSGGNNRMVLSRCQEKT 297
N G + ++E S + ++ D D+ +L+ N ++ N+ L+ +E
Sbjct: 229 NTKHLGKKHDSFESLSVIHSNECEVDSATDDGDDDDDDLITN-IATKKNKAALTGTEELE 287
Query: 298 TILPTNKKLTLSEARTSKDRSAQSLPREQKKNDLLRSKKRKSLHNDEI-------LMAAS 350
I+ S+ ++K A+ P E +K S K K + + +++
Sbjct: 288 RIME-------SQEWSNKTNIAEEEPVEAQKRSKSNSNKVKKRKSLSKSESESNGVASST 340
Query: 351 PLDDMNVQTNMNKPSTPLATQHAETDSGVRKSTASHSWSQKMSWKALVGDKDSRAFSVSN 410
P+ +QT +++ + E D G +A SWSQK SW+ LVG + +FS S
Sbjct: 341 PVGKSKMQTLLDEVGSGAKPTEPEYDFG---ESAKVSWSQKSSWRELVGKGGNASFSASL 397
Query: 411 ILPSDASTEEADNGINSF 428
I P S ++ N S+
Sbjct: 398 ISPKFDSADDQQNSDGSY 415
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 98/191 (51%), Gaps = 27/191 (14%)
Query: 622 VEVPAKAQPS-----------KSNTAPNKSGKGSSWFQKSPWTQLVNEDNSSFSITQISP 670
+E PA+AQP+ + N AP +G G SW+QK WTQL NE+NS FS++Q+ P
Sbjct: 485 IEEPAEAQPTNKQVITEPAETQHNIAPKITGTGVSWWQKKSWTQLANENNSPFSLSQLLP 544
Query: 671 GITFKKHDVPKTQLGKEVANPNDKKSSKSVGQAGSKPITCASTALEDGKKGEIVSQIIPE 730
I+F P+ + + P S G+ T T + GEIV
Sbjct: 545 DISF-----PEQTAKEPILYP---AGSSECKHNGADKNTVDGTVTDGFNLGEIVP----- 591
Query: 731 KNQPTDVGDNEASASMVADKHDLTPRQ-TTNVDGTIGETCSFMRSAASIKEWSTAKAALS 789
N D+ SA +V + +PR+ + NV+ IGETCSFMRSA S+KEW AKAA+S
Sbjct: 592 GNSEHAGTDDIVSAPVVEKIVETSPRERSANVE--IGETCSFMRSADSLKEWKKAKAAVS 649
Query: 790 GSQSHKRKSHK 800
GS KR K
Sbjct: 650 GSLKRKRSEKK 660
>gi|356558554|ref|XP_003547570.1| PREDICTED: uncharacterized protein LOC100808161 [Glycine max]
Length = 607
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 177/418 (42%), Positives = 246/418 (58%), Gaps = 44/418 (10%)
Query: 3 KKEAEAEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKGRSFGYVDFFPSS 62
++EAE E + RI+VGGL V+ +DL +F+SLG V++V +RTKGRSF Y+DF S
Sbjct: 2 EEEAE-ETKSAVRIFVGGLAGAVSAEDLRSLFASLGSVQSVQTIRTKGRSFAYLDFL-SD 59
Query: 63 HKSLSKLFSTYNGCVWKGGRLRLERAKEHYLARLKREW---AEDDAQLVNPPVT--DSVA 117
KSLSKLFS YNGC+WKGGRLRLE+AKE YL RLKREW A DDA PP +
Sbjct: 60 PKSLSKLFSKYNGCLWKGGRLRLEKAKEDYLVRLKREWEQGALDDATQ-KPPAAAIEEEI 118
Query: 118 PDNKDATRLDTPKKLLDKDKKLNIFFPRLRKVKTLPFCGTGKHKYSFQRVEAPPLPKYFC 177
P ++ +T K LNIFFPRLRKVK++PF GTGKHKYSFQ ++ P LP +FC
Sbjct: 119 PSTAHSSESNT--------KHLNIFFPRLRKVKSIPFSGTGKHKYSFQNIKVPLLPVHFC 170
Query: 178 DCEEHSAAFHAAEGKQIHHPAAGQEEIHDMEELGASVINEEELNLMNSVMNKLFERENVS 237
DCEEH + F P + I + GA +N+EE+++MN+VMNKL ++ VS
Sbjct: 171 DCEEHCSPF---------VPEREKLSIDRAADSGA--MNDEEISIMNAVMNKLLGKQKVS 219
Query: 238 NAGLSGTELTNYERNSYNFIGDLQIGGNEVDSVADEYNLVINAVSGGNNRMVLSRCQEKT 297
NA G E ++E + + DS DE +L+IN V N+ L+ +E
Sbjct: 220 NAKKLGEEKGSFESPDALHSDECE------DSATDEDDLIIN-VETKKNKTALTGDEELQ 272
Query: 298 TILPTNKKLTLSEARTSKDRSAQSLPREQKK--NDLLRSKKRKSLHNDEILMAASPLDDM 355
IL N++ L++ + +K+ +S+P QK+ ++ ++KKRKSL E+ + +P
Sbjct: 273 RIL-ENQESWLNKTKIAKEEPNKSMPPVQKRSNSNHDKNKKRKSLPKLEV--STTPGSKS 329
Query: 356 NVQTNMNKPSTPLATQHAETDSGVRKSTASHSWSQKMSWKALVGDKDSRAFSVSNILP 413
N+Q ++ + E D G + SWSQK SW+ L+GDK + +FS S ILP
Sbjct: 330 NMQMLPDEVGSGAQPTELEDDFGEKV-----SWSQKSSWRELLGDKGNTSFSASLILP 382
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 129/377 (34%), Positives = 194/377 (51%), Gaps = 46/377 (12%)
Query: 439 DDLMINVVSKKKPKMALSSSQKWETTSTTYRKSVSNEDNNTTKDRPIQQE--KSTLPSKK 496
DDL+INV +KK K AL+ ++ ++ + N+++ K + ++E KS P +K
Sbjct: 250 DDLIINVETKKN-KTALTGDEE-------LQRILENQESWLNKTKIAKEEPNKSMPPVQK 301
Query: 497 KRKSVIDDESDKNKSVHTVPETDGCAQTYTESQMPTGPQLV----EPESVVEQSISDHSE 552
+ S DKNK ++P+ + ++S M P V +P + + S
Sbjct: 302 RSNS----NHDKNKKRKSLPKLEVSTTPGSKSNMQMLPDEVGSGAQPTELEDDFGEKVSW 357
Query: 553 SKKPSQRVVIGSKGNDESSVSNVLPDNSAKEEQRVFDCPDEPLGSTDSKNQNSLARNENL 612
S+K S R ++G KGN S S +LP + E Q+ D P+ ST+ K +N + + +L
Sbjct: 358 SQKSSWRELLGDKGNTSFSASLILPKLDSGESQQRSDDQSTPV-STNKKTEN-MEWDGHL 415
Query: 613 EGKLAETESVEVPAKAQPSKSNT-------------APNKSGKGSSWFQKSPWTQLVNED 659
K +E +AQP+ APNK+G+GSSW QK WTQ+V+++
Sbjct: 416 GSKPTNPHVIEELVEAQPTNKQVIEDVTNNKHNVAVAPNKTGRGSSWLQKQSWTQMVSQN 475
Query: 660 NSSFSITQISPGITFKKHDVPKTQLGKEVANPNDKKSSKSVGQAGSKPITCASTALEDGK 719
N+SFSI+ I PGITF P+ + + P K G A T E
Sbjct: 476 NNSFSISNILPGITF-----PEPMATEPIVEPAISNDCKHNGVA-------KDTVNEVVS 523
Query: 720 KGEIVSQIIPEKNQPTDVGDNEASASMVADKHDLTPRQTTNVDGTIGETCSFMRSAASIK 779
G + IP K+Q T D+ ASAS+V +K + +PR+ ++ + IGETCSFMRSAAS+K
Sbjct: 524 DGFSSRETIPVKSQHTG-ADDIASASVVEEKVETSPREKSSENVEIGETCSFMRSAASLK 582
Query: 780 EWSTAKAALSGSQSHKR 796
EW+ AKAA+SGS KR
Sbjct: 583 EWAKAKAAMSGSLKRKR 599
>gi|449476201|ref|XP_004154670.1| PREDICTED: uncharacterized protein LOC101231362 [Cucumis sativus]
Length = 657
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 177/426 (41%), Positives = 237/426 (55%), Gaps = 48/426 (11%)
Query: 1 MEKKEAEAEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEV-KAVDIVRTKGRSFGYVDFF 59
MEK ++ +E RIYVGGLG +T+DDL KVF S+G V +AVD VRTK RSF YVDFF
Sbjct: 1 MEKGQSASE---NMRIYVGGLGAAMTEDDLRKVFHSVGGVVEAVDFVRTKSRSFAYVDFF 57
Query: 60 PSSHKSLSKLFSTYNGCVWKGGRLRLERAKEHYLARLKREWAEDDAQLVNPPV---TDSV 116
PSS SLSKLFSTYNGC WKGG+LRLE+AKE+YLARLKREW E+DAQ+ + V + V
Sbjct: 58 PSSQSSLSKLFSTYNGCAWKGGKLRLEKAKENYLARLKREW-EEDAQIRDSNVGADMELV 116
Query: 117 APDNKDATRLDTPKKLLDKDKKLNIFFPRLRKVKTLPFCGTGKHKYSFQRVEAPPLPKYF 176
AP++ + + K + +NIFFP L +VK LP GTG HKY F VE PP P +F
Sbjct: 117 APESTEH---------VTKSEHINIFFPSLGEVKPLPISGTGTHKYDFPHVEVPPFPVHF 167
Query: 177 CDCEEHSAAFHAAEGKQIHHPAAGQEEIHDMEELGA--SVINEEELNLMNSVMNKLFERE 234
CDCEEH+A+ G + +L A ++E+E+ +MN+V++KLFER+
Sbjct: 168 CDCEEHNAS-----------SPIGNSKYTKTRDLNAENGGMDEDEIKMMNAVLSKLFERK 216
Query: 235 NVSNAGLSGTELTNYERNSYNFIGDLQIGGNEVDSVADEYNLVINAVSGGNNRMVLSRCQ 294
S + + + N + NS + + N+VDS DE NLV+N ++ S C
Sbjct: 217 EASQSNCNDSMALNDKHNSTTSTDNQLLEDNKVDS--DEDNLVLNVMA--------SNCN 266
Query: 295 EKTTILPTNKKLTLSEARTSKDRSAQSLPREQKKNDLLRSKKRKSLHNDEILMAASPLDD 354
KT L K+ + SKD R+QK N ++SKKRKS ++E S
Sbjct: 267 SKTMALNRGNKIFKAHG-NSKDAV-----RDQKNNCRVQSKKRKSFISEEFDGNESVPSI 320
Query: 355 MNVQTNMNKPSTPLATQHAETDSGVRKSTASHSWSQKMSWKALVGDKDSRAFSVSNILPS 414
+ P + + R SQK SWK L+ DK + +F +S+IL S
Sbjct: 321 FTSNRGTDPSYDPARSSRPQAPD--RGPPVQSLRSQKSSWKTLIRDKSNVSFCISDILSS 378
Query: 415 DASTEE 420
S E
Sbjct: 379 VPSANE 384
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 130/447 (29%), Positives = 197/447 (44%), Gaps = 92/447 (20%)
Query: 417 STEEADNGINSFEELNFDENESDDLMINVVSKK--KPKMALSSSQKWETTSTTYRKSVSN 474
ST DN + E+ D +E D+L++NV++ MAL+ K + +V +
Sbjct: 235 STTSTDNQL--LEDNKVDSDE-DNLVLNVMASNCNSKTMALNRGNKIFKAHGNSKDAVRD 291
Query: 475 EDNNTTKDRPIQQEKSTLPSKKKRKSVIDDESDKNKSVHTVPETD-GCAQTY--TESQMP 531
+ NN +Q KKRKS I +E D N+SV ++ ++ G +Y S P
Sbjct: 292 QKNNCR----VQS--------KKRKSFISEEFDGNESVPSIFTSNRGTDPSYDPARSSRP 339
Query: 532 TGPQ-----------------LVEPESVVEQSISD---------------------HSES 553
P L+ +S V ISD HS
Sbjct: 340 QAPDRGPPVQSLRSQKSSWKTLIRDKSNVSFCISDILSSVPSANEEKAEADDLNIAHSTP 399
Query: 554 KKPSQ---RVVIGS--------KGNDESSVSNVLPDNSAKEEQRVFDCPDEPLGSTD--- 599
+ S V+GS K N S+++VLP + ++++ E S D
Sbjct: 400 NRNSNLASTAVLGSEIDEIQSGKINVPFSITDVLPLVLSADQEKAASADQEKAASADLNL 459
Query: 600 ---SKNQNS-LARNENLEGKLAETESVEVPAKAQPSKSNTAPNKSGKGSSWFQKSPWTQL 655
+ N N+ + + + K E ESVE AQ + N NK G+GSSW +KS WTQL
Sbjct: 460 AHSTPNINTDVGADPISKSKSEEMESVESFQDAQCTVPNVTLNK-GRGSSWRKKSSWTQL 518
Query: 656 VNEDNSSFSITQISPGITFKKHDVPKTQLGKEVANPNDKKSSKSVGQAGSKPIT-CA--- 711
V+E+ +SFSITQI P T + Q+ E + N S+ S A K + C
Sbjct: 519 VSEEFTSFSITQILPNST------SENQVQGESGDINANFSAWSETNAPRKQDSECIAKD 572
Query: 712 -STALEDGKKGEIVSQIIPEKNQPTDVGDNEASASMVADKHDLTPRQTTNVDGTIGETCS 770
STA G KGEI + ++N+P V + E + + + + P+Q + D G+TC
Sbjct: 573 ESTAFVIG-KGEIGCNDV-KQNEPQAVQECETCPTQITESN--FPQQEGSFDEISGDTCP 628
Query: 771 FMRSAASIKEWSTAKAALSGSQSHKRK 797
FMR++ S+ EW+ KAALSG K++
Sbjct: 629 FMRNSQSVAEWTKIKAALSGGSKKKKQ 655
>gi|449442775|ref|XP_004139156.1| PREDICTED: uncharacterized protein LOC101203716 [Cucumis sativus]
Length = 649
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 176/426 (41%), Positives = 236/426 (55%), Gaps = 48/426 (11%)
Query: 1 MEKKEAEAEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEV-KAVDIVRTKGRSFGYVDFF 59
MEK ++ +E RIYVGGLG +T+DDL KVF S+G V +AVD VRTK RSF YVDFF
Sbjct: 1 MEKGQSASE---NMRIYVGGLGAAMTEDDLRKVFHSVGGVVEAVDFVRTKSRSFAYVDFF 57
Query: 60 PSSHKSLSKLFSTYNGCVWKGGRLRLERAKEHYLARLKREWAEDDAQLVNPPV---TDSV 116
PSS SLSKLFSTYNGC WKGG+LRLE+AKE+YLARL REW E+DAQ+ + V + V
Sbjct: 58 PSSQSSLSKLFSTYNGCAWKGGKLRLEKAKENYLARLNREW-EEDAQIRDNNVGADMELV 116
Query: 117 APDNKDATRLDTPKKLLDKDKKLNIFFPRLRKVKTLPFCGTGKHKYSFQRVEAPPLPKYF 176
AP++ + + K + +NIFFP L +VK LP GTG HKY F VE PP P +F
Sbjct: 117 APESTEH---------VTKSEHINIFFPSLGEVKPLPISGTGTHKYDFPHVEVPPFPVHF 167
Query: 177 CDCEEHSAAFHAAEGKQIHHPAAGQEEIHDMEELGA--SVINEEELNLMNSVMNKLFERE 234
CDCEEH+A+ G + +L A ++E+E+ +MN+V++KLFER+
Sbjct: 168 CDCEEHNAS-----------SPIGNSKYTKTRDLNAENGGMDEDEIKMMNAVLSKLFERK 216
Query: 235 NVSNAGLSGTELTNYERNSYNFIGDLQIGGNEVDSVADEYNLVINAVSGGNNRMVLSRCQ 294
S + + + N + NS + + N+VDS DE NLV+N ++ S C
Sbjct: 217 EASQSNCNDSMALNDKHNSTTSTDNQLLEDNKVDS--DEDNLVLNVMA--------SNCN 266
Query: 295 EKTTILPTNKKLTLSEARTSKDRSAQSLPREQKKNDLLRSKKRKSLHNDEILMAASPLDD 354
KT L K+ + SKD R+QK N ++SKKRKS ++E S
Sbjct: 267 SKTMALNRGNKIFKAHG-NSKDAV-----RDQKNNCRVQSKKRKSFISEEFDGNESVPSI 320
Query: 355 MNVQTNMNKPSTPLATQHAETDSGVRKSTASHSWSQKMSWKALVGDKDSRAFSVSNILPS 414
+ P + + R SQK SWK L+ DK + +F +S+IL S
Sbjct: 321 FTSNRGTDPSYDPARSSRPQAPD--RGPPVQSLRSQKSSWKTLIRDKSNVSFCISDILSS 378
Query: 415 DASTEE 420
S E
Sbjct: 379 VPSANE 384
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 101/188 (53%), Gaps = 16/188 (8%)
Query: 615 KLAETESVEVPAKAQPSKSNTAPNKSGKGSSWFQKSPWTQLVNEDNSSFSITQISPGITF 674
K E ESVE AQ + N NK G+GSSW +KS WTQLV+E+ +SFSITQI P T
Sbjct: 471 KSEEMESVESFQDAQCTVPNVTLNK-GRGSSWRKKSSWTQLVSEEFTSFSITQILPNST- 528
Query: 675 KKHDVPKTQLGKEVANPNDKKSSKSVGQAGSKPIT-CA----STALEDGKKGEIVSQIIP 729
+ Q+ E + N S+ S A K + C STA G KGEI +
Sbjct: 529 -----SENQVQGESGDINANFSAWSETNAPRKQDSECIAKDESTAFVIG-KGEIGCNDV- 581
Query: 730 EKNQPTDVGDNEASASMVADKHDLTPRQTTNVDGTIGETCSFMRSAASIKEWSTAKAALS 789
++N+P V + E + + + + P+Q + D G+TC FMR++ S+ EW+ KAALS
Sbjct: 582 KQNEPQAVQECETCPTQITESN--FPQQEGSFDEISGDTCPFMRNSQSVAEWTKIKAALS 639
Query: 790 GSQSHKRK 797
G K++
Sbjct: 640 GGSKKKKQ 647
>gi|297796733|ref|XP_002866251.1| hypothetical protein ARALYDRAFT_495917 [Arabidopsis lyrata subsp.
lyrata]
gi|297312086|gb|EFH42510.1| hypothetical protein ARALYDRAFT_495917 [Arabidopsis lyrata subsp.
lyrata]
Length = 728
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 150/320 (46%), Positives = 192/320 (60%), Gaps = 39/320 (12%)
Query: 14 TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKGRSFGYVDFFPSSHKSLSKLFSTY 73
R++VGGLGE V DDL K+FS +G V AV+ VRTKGRSF YVDF PSS SL+KLFSTY
Sbjct: 11 VRLHVGGLGESVGRDDLLKIFSPMGTVDAVEFVRTKGRSFAYVDFSPSSTNSLTKLFSTY 70
Query: 74 NGCVWKGGRLRLERAKEHYLARLKREWAEDDAQLVNPPVTDSVAPDNKDATRLDTPKKLL 133
NGCVWKGGRLRLE+AKEHYLARLKREW S + + A TP
Sbjct: 71 NGCVWKGGRLRLEKAKEHYLARLKREWE----------AASSTSDNTIKAPSDSTPS--- 117
Query: 134 DKDKKLNIFFPRLRKVKTLPFCGTGKHKYSFQRVE-APPLPKYFCDCEEHSAAFHAAEGK 192
LNIFFPRLRKVK +P GTGKHKYSFQRV + LPK FCDCEEHS ++ +
Sbjct: 118 ---THLNIFFPRLRKVKAMPLTGTGKHKYSFQRVPLSSSLPKSFCDCEEHSN--NSLTPR 172
Query: 193 QIHHPAAGQEEIHDMEELGASVINEEELNLMNSVMNKLFERENVSNAGLSGTELTNYERN 252
+ H + D+E L NE+E+N+MNSVMNKLFE+ N+ A E E +
Sbjct: 173 ETH--------LQDLESLNVGR-NEDEVNVMNSVMNKLFEKNNIPIA----EEDNEIEAD 219
Query: 253 SYNFIGDLQIGGNEVDSVADEYNL----VINAVSGGNNRMVLSRCQEKTTILPTNKKLTL 308
N I ++ GN++DS D+ + ++N + S ++ I P+ K+ T+
Sbjct: 220 QDNLIINVASSGNDMDSELDKLSRKRKSILNETTPSGEG--YSEGRKGNHIHPSKKRQTI 277
Query: 309 SEARTSKDRSAQSLPREQKK 328
S + + S+QS+ RE+KK
Sbjct: 278 SLEESGRQESSQSI-REKKK 296
>gi|224118684|ref|XP_002331422.1| predicted protein [Populus trichocarpa]
gi|222873636|gb|EEF10767.1| predicted protein [Populus trichocarpa]
Length = 583
Score = 255 bits (652), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 188/448 (41%), Positives = 247/448 (55%), Gaps = 66/448 (14%)
Query: 15 RIYVGGLGEKVTDDDLAKVFSS-----LGEVKAVDIVRTKGRSFGYVDFFPSSHKSLSKL 69
RI+VGGLGE V+ +DL +FSS LG +++V+I+R+KGRSF Y+DFF SS+ SLSKL
Sbjct: 27 RIFVGGLGESVSSEDLRNIFSSNKSLGLG-IQSVEIIRSKGRSFAYIDFFSSSNNSLSKL 85
Query: 70 FSTYNGCVWKGGRLRLERAKEHYLARLKREWA----EDDAQLVNPPVTDSVA--PDNKDA 123
F+TYNGC WKGG+LRLE+AKEHYLARL EWA ED L+ P D P NK
Sbjct: 86 FNTYNGCAWKGGKLRLEKAKEHYLARLTCEWAQDQDEDQHPLLPTPNLDHAQDDPTNKKL 145
Query: 124 TRLDTP--KKLLDKDKKLNIFFPRLRKVKTLPFCGTGKHKYSFQRVEAPPLPKYFCDCEE 181
+ P K+LL ++K+L +FFP L K+K++PF GTGKH+YSF+RVE PPLPK+FCDCEE
Sbjct: 146 SISSKPSNKELLSENKQLRLFFPGLGKIKSIPFRGTGKHRYSFRRVEVPPLPKHFCDCEE 205
Query: 182 HSAAFHAAEGKQIHHPAAGQEEIHDMEELGASVINEEELNLMNSVMNKLFERENVSNAGL 241
HS AA K H P MEE GA +++EEL LMNSVMNKLF+ ENVS+
Sbjct: 206 HSEP-PAAAAKCRHIPI--------MEEQGAG-MDKEELTLMNSVMNKLFQMENVSDNAC 255
Query: 242 SGTELTNYERNSYNFIGDLQIGGNEVDSVADEYNLVINAVSGGNNRM---------VLSR 292
EL +S + NE D D+ NL+IN N R VL +
Sbjct: 256 CEIELDKKVDDSMKTTDKPPLEENEGDIDEDDDNLIINMRRRFNVRQTSTDEPTQKVLQK 315
Query: 293 CQEKTTILPTNK--KLTLSEARTSKDRSAQSLPREQKKNDLLRSKKRKSLHNDEIL---- 346
+ TT P+NK K+ L+E + +++ +P N L ++ KS + E L
Sbjct: 316 QKRNTT--PSNKKRKIVLNE----ESNTSEGMPAMPGGNGSLLEQQSKSDNASETLPGHS 369
Query: 347 ----------MAASPLDDMN----VQTNMNKPSTPL--ATQHAET-----DSGVRKSTAS 385
A D N Q N N+ + + H E DS K
Sbjct: 370 SSKEEQPKCDKVADSRDSENNKSWKQENQNEHFSRIKEVGGHKEALSTKLDSASNKPGRG 429
Query: 386 HSWSQKMSWKALVGDKDSRAFSVSNILP 413
++W K SW LV +S AFS+++ILP
Sbjct: 430 YAWLNKSSWTQLVSGNNSNAFSITHILP 457
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 106/323 (32%), Positives = 160/323 (49%), Gaps = 52/323 (16%)
Query: 479 TTKDRPIQ-----QEKSTLPSKKKRKSVIDDESDKNKSVHTVPETDGCAQTYTESQMPTG 533
T+ D P Q Q+++T PS KKRK V+++ES+ ++ + +P +G
Sbjct: 303 TSTDEPTQKVLQKQKRNTTPSNKKRKIVLNEESNTSEGMPAMPGGNG------------- 349
Query: 534 PQLVEPESVVEQSISDHSESKKPSQRVVIGSKGNDESSVSNVLPDNSAKEEQRVFDCPDE 593
L+E +QS SD++ P +S+KEEQ C D+
Sbjct: 350 -SLLE-----QQSKSDNASETLPGH--------------------SSSKEEQP--KC-DK 380
Query: 594 PLGSTDSKNQNSLARNENLEGKLAETESVEVPAKAQPSKSNTAPNKSGKGSSWFQKSPWT 653
S DS+N S + EN + + V +A +K ++A NK G+G +W KS WT
Sbjct: 381 VADSRDSENNKSW-KQENQNEHFSRIKEVGGHKEALSTKLDSASNKPGRGYAWLNKSSWT 439
Query: 654 QLVNEDNS-SFSITQISPGITFKKHDVPKTQLGKEVANPNDKKSSKSVGQAGSKPITCAS 712
QLV+ +NS +FSIT I PG+TF K + P G EV + ++ P +
Sbjct: 440 QLVSGNNSNAFSITHILPGVTFAKVE-PSKPDGLEVPSSMKSMHGDIFKKSNIVPTVDGT 498
Query: 713 TALEDGKKGEIVSQIIPEKNQPTDVGDNEASASMVADKHDLTPRQTTNVDGTIGETCSFM 772
A K+G + +++ + T VG+ EASA +V K + + D +IGETCSFM
Sbjct: 499 LAFGVRKEGNVQNRVA--MSPQTVVGNAEASAPVVEKKTNSETKPAYTRDVSIGETCSFM 556
Query: 773 RSAASIKEWSTAKAALSGSQSHK 795
R+A S+KEW+ KAALSGS+ K
Sbjct: 557 RTADSVKEWARTKAALSGSRKRK 579
>gi|15242956|ref|NP_200621.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|9759539|dbj|BAB11005.1| unnamed protein product [Arabidopsis thaliana]
gi|110738487|dbj|BAF01169.1| hypothetical protein [Arabidopsis thaliana]
gi|332009617|gb|AED97000.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 748
Score = 253 bits (645), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 139/273 (50%), Positives = 168/273 (61%), Gaps = 37/273 (13%)
Query: 1 MEKKEAEAEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKGRSFGYVDFFP 60
ME+K + V R++VGGLGE V DDL K+FS +G V AV+ VRTKGRSF Y+DF P
Sbjct: 1 MEEKSSGGGV----RLHVGGLGESVGRDDLLKIFSPMGTVDAVEFVRTKGRSFAYIDFSP 56
Query: 61 SSHKSLSKLFSTYNGCVWKGGRLRLERAKEHYLARLKREWAEDDAQLVNPPVTDSVAPDN 120
SS SL+KLFSTYNGCVWKGGRLRLE+AKEHYLARLKREW S DN
Sbjct: 57 SSTNSLTKLFSTYNGCVWKGGRLRLEKAKEHYLARLKREWE-----------AASSTSDN 105
Query: 121 KDATRLDTPKKLLDKDKKLNIFFPRLRKVKTLPFCGTGKHKYSFQRVE-APPLPKYFCDC 179
D+P LNIFFPRLRKVK +P GTGKHKYSFQRV + LP+ FCDC
Sbjct: 106 TIKAPSDSPPAT-----HLNIFFPRLRKVKPMPLSGTGKHKYSFQRVPVSSSLPRSFCDC 160
Query: 180 EEHSAAFHAAEGKQIHHPAAGQEEIHDMEELGASVINEEELNLMNSVMNKLFERENVSNA 239
EEHS + + ++IH +HD+E + E E+N+MNSVMNKLFE+ NV
Sbjct: 161 EEHSNS--SLTPREIH--------LHDLEAVNVGR-QEAEVNVMNSVMNKLFEKNNV--- 206
Query: 240 GLSGTELTNYERNSYNFIGDLQIGGNEVDSVAD 272
E E + N I ++ GN++DS D
Sbjct: 207 --DPEEDNEIEADQDNLIINVASSGNDMDSALD 237
>gi|22655068|gb|AAM98125.1| unknown protein [Arabidopsis thaliana]
Length = 748
Score = 253 bits (645), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 139/273 (50%), Positives = 168/273 (61%), Gaps = 37/273 (13%)
Query: 1 MEKKEAEAEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKGRSFGYVDFFP 60
ME+K + V R++VGGLGE V DDL K+FS +G V AV+ VRTKGRSF Y+DF P
Sbjct: 1 MEEKSSGGGV----RLHVGGLGESVGRDDLLKIFSPMGTVDAVEFVRTKGRSFAYIDFSP 56
Query: 61 SSHKSLSKLFSTYNGCVWKGGRLRLERAKEHYLARLKREWAEDDAQLVNPPVTDSVAPDN 120
SS SL+KLFSTYNGCVWKGGRLRLE+AKEHYLARLKREW S DN
Sbjct: 57 SSTNSLTKLFSTYNGCVWKGGRLRLEKAKEHYLARLKREWE-----------AASSTSDN 105
Query: 121 KDATRLDTPKKLLDKDKKLNIFFPRLRKVKTLPFCGTGKHKYSFQRVE-APPLPKYFCDC 179
D+P LNIFFPRLRKVK +P GTGKHKYSFQRV + LP+ FCDC
Sbjct: 106 TIKAPSDSPPAT-----HLNIFFPRLRKVKPMPLSGTGKHKYSFQRVPVSSSLPRSFCDC 160
Query: 180 EEHSAAFHAAEGKQIHHPAAGQEEIHDMEELGASVINEEELNLMNSVMNKLFERENVSNA 239
EEHS + + ++IH +HD+E + E E+N+MNSVMNKLFE+ NV
Sbjct: 161 EEHSNS--SLTPREIH--------LHDLEAVNVGR-QEAEVNVMNSVMNKLFEKNNV--- 206
Query: 240 GLSGTELTNYERNSYNFIGDLQIGGNEVDSVAD 272
E E + N I ++ GN++DS D
Sbjct: 207 --DPEEDNEIEADQDNLIINVASSGNDMDSALD 237
>gi|115444113|ref|NP_001045836.1| Os02g0138200 [Oryza sativa Japonica Group]
gi|42409268|dbj|BAD10531.1| RNA recognition motif (RRM)-containing protein-like [Oryza sativa
Japonica Group]
gi|113535367|dbj|BAF07750.1| Os02g0138200 [Oryza sativa Japonica Group]
gi|125538008|gb|EAY84403.1| hypothetical protein OsI_05779 [Oryza sativa Indica Group]
gi|125580747|gb|EAZ21678.1| hypothetical protein OsJ_05309 [Oryza sativa Japonica Group]
gi|215694017|dbj|BAG89216.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 552
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 158/433 (36%), Positives = 232/433 (53%), Gaps = 55/433 (12%)
Query: 15 RIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKGRSFGYVDFFPSSHKSLSKLFSTYN 74
RI+VGG+ E V DL +F+S+G V V+ VRT GRSF YVDF S K+L+KLFSTYN
Sbjct: 17 RIFVGGISEGVAAADLEAMFASVGRVAGVEFVRTNGRSFAYVDFHCPSDKALAKLFSTYN 76
Query: 75 GCVWKGGRLRLERAKEHYLARLKREWAEDDAQLVNPPVTDSVAPDNKDATRLDTPKKLLD 134
GC WKGG+LRLE+AKEHYL RLKREW ++ A P + V + +L+ K +LD
Sbjct: 77 GCKWKGGKLRLEKAKEHYLTRLKREWEQEAAAAQEMPASADVESKKE---KLELNKAVLD 133
Query: 135 KDKKLNIFFPRLRKVKTLPFCGTGKHKYSFQRVEAPPLPKYFCDCEEHSAAFHAAEGKQI 194
K+NI+FP+LRKVK LPF GTGKHKYSF+ +E P P +FCDCEEH
Sbjct: 134 -STKINIYFPKLRKVKALPFKGTGKHKYSFRHIEVPSYPIHFCDCEEHCGP--------- 183
Query: 195 HHPAAGQEEIHDMEELGASVINEEELNLMNSVMNKLFERENVSNAGLSGTELTNY----- 249
P A +E + + A E+E ++MNSVM+KLFE+E N L E+ N+
Sbjct: 184 --PEAANDEYASVLDAAA---YEKERSIMNSVMSKLFEKE---NDHLDSMEIQNHGVDFD 235
Query: 250 ERNSYNFIGDLQIGGNEVDS---VADEYNLVINAVSGGNNRMVLS--RCQEKTTI--LPT 302
N +LQ+ E S + D+ + + +VL+ C+ K+++ L +
Sbjct: 236 AAEPSNARNELQMDKREETSEEDLDDQMEETEDPSEEELDDLVLNIVTCKPKSSVAQLNS 295
Query: 303 NKKLTLSEARTSKDRSAQ--SLPREQKKNDLLRSKKRK--------SLHNDEIL--MAAS 350
K+ ++R K + + SL + K +D ++ RK ++ N++ ++
Sbjct: 296 EKQAADKDSRFRKRQQFEESSLQKRHKSSDFSETRNRKQSFPAISGAIQNEQKSSDLSGK 355
Query: 351 PLDDMNVQTNMNKPSTPLATQHAETDSGVRKSTASHS----------WSQKMSWKALVGD 400
+ + + + +K S + A DS R + +S W+QK +W+ LVG
Sbjct: 356 GTHEFSSELDGDKSSASVQDVEALADSSTRNGSEQNSLASEPKRVSLWTQKSAWRDLVGG 415
Query: 401 KDSRAFSVSNILP 413
S +FS+S ILP
Sbjct: 416 MGSASFSLSQILP 428
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 79/164 (48%), Gaps = 25/164 (15%)
Query: 631 SKSNTAPNKSGKGSSWFQKSPWTQLVNEDNS-SFSITQISPGITFKKHDVPKTQLGKEVA 689
S+ N+ ++ + S W QKS W LV S SFS++QI P PK V+
Sbjct: 388 SEQNSLASEPKRVSLWTQKSAWRDLVGGMGSASFSLSQILPNTN---PAPPK------VS 438
Query: 690 NPNDKKSSKSVGQAGSKPITCASTALEDGKKGEIVSQIIPEKNQPTD---VGDNEASASM 746
N + +S + + KP + +L K E +Q++PE+ PT + +E +
Sbjct: 439 NATEASASHAESRTKVKP---SGKSL---KPSEAATQLLPEQKMPTSSMAMLSSERKENN 492
Query: 747 VADKHDLTPRQTTNVDGTIGETCSFMRSAASIKEWSTAKAALSG 790
+K + P+ T IGE C FMR++ S K+WS AK L+G
Sbjct: 493 KLEKERVVPKIT------IGEVCPFMRNSESEKQWSKAKKVLTG 530
>gi|112361876|gb|ABI15899.1| marker Xucw84 [Triticum dicoccoides]
Length = 614
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 116/231 (50%), Positives = 143/231 (61%), Gaps = 30/231 (12%)
Query: 14 TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKGRSFGYVDFFPSSHKSLSKLFSTY 73
TR++VGGL E V+ DL VF S+G V V+ VRT GRSF YVDF SHK+L+KLFSTY
Sbjct: 17 TRLFVGGLAEGVSAADLEAVFGSIGRVAGVEFVRTSGRSFAYVDFQCPSHKALAKLFSTY 76
Query: 74 NGCVWKGGRLRLERAKEHYLARLKREWAEDDAQLVNP------PVTDSVAPDNKDATRLD 127
NGC WKGG+L+LE+AKEHYL RLKREW ++ A P DSV + R
Sbjct: 77 NGCKWKGGKLKLEKAKEHYLVRLKREWEQEAAAAAAAAAAQEMPAEDSVDKQEEKEKRKL 136
Query: 128 TPKKLLDKDKKLNIFFPRLRKVKTLPFCGTGKHKYSFQRVEAPPLPKYFCDCEEHSAAFH 187
L + KLNI+FPRLRK+K LPF G+GKHKYSF+ +E P P +FCDCEEH
Sbjct: 137 EKDAL--ESSKLNIYFPRLRKLKPLPFKGSGKHKYSFRNIEVPSYPIHFCDCEEHCGP-- 192
Query: 188 AAEGKQIHHPAAGQEEIHDMEELGASVIN----EEELNLMNSVMNKLFERE 234
P EE A+V+N E+E N+MNSVM+KLFE++
Sbjct: 193 ---------PEKANEEY-------AAVLNRVAYEKERNIMNSVMSKLFEKD 227
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 73/162 (45%), Gaps = 31/162 (19%)
Query: 642 KGSSWFQKSPWTQLVN-EDNSSFSITQISPGITFKKHDVPKTQLGKE--VANPNDKKSSK 698
+GS W QKS W LV +SFSI+QI P I PK + E VA ++
Sbjct: 446 RGSVWTQKSAWRDLVGGMGATSFSISQILPNINPAP---PKLEPATETSVARTESRREVT 502
Query: 699 SVGQAGSKPITCASTALEDGKKGEIVSQIIPEKNQPTDVGDNEASASMVADKHDLT---- 754
S+G T+L E ++Q + E+N P+ G A ++ + H+
Sbjct: 503 SLGM----------TSL---GSPEAITQPLAEQNSPSSTGTPSAGTTVGSAGHETRGCDV 549
Query: 755 ------PRQTTNVDGTIGETCSFMRSAASIKEWSTAKAALSG 790
PR + TI E C FMR+ SI++WS AK L+G
Sbjct: 550 SNKVEEPRVVPKI--TISEVCPFMRNEESIQQWSKAKKVLTG 589
>gi|226492471|ref|NP_001140985.1| uncharacterized protein LOC100273064 [Zea mays]
gi|194702044|gb|ACF85106.1| unknown [Zea mays]
gi|413926802|gb|AFW66734.1| hypothetical protein ZEAMMB73_767830 [Zea mays]
Length = 565
Score = 219 bits (557), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 114/225 (50%), Positives = 141/225 (62%), Gaps = 26/225 (11%)
Query: 15 RIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKGRSFGYVDFFPSSHKSLSKLFSTYN 74
RI+VGGL E V DL +F+S G V V+ VRT GRSF YVDF + K+L++LFSTYN
Sbjct: 25 RIFVGGLAESVGAADLEALFASAGRVAGVEFVRTNGRSFAYVDFHCPNDKALARLFSTYN 84
Query: 75 GCVWKGGRLRLERAKEHYLARLKREWAEDDAQLVNPPVTDSVAPDNKDATRLDTPKKLLD 134
GC WKGG+LRLE+AKEHYL RLKREW +D A + ++ DN + + K L+
Sbjct: 85 GCKWKGGKLRLEKAKEHYLTRLKREWEQDAAAAAS---KEAALKDNAENQKPKLDKAALE 141
Query: 135 KDKKLNIFFPRLRKVKTLPFCGTGKHKYSFQRVEAPPLPKYFCDCEEHSAAFHAAEGKQI 194
K+NI+FP+LRKVK LP GTGKHKYSF+ +E P P +FCDCEEH
Sbjct: 142 -GLKINIYFPKLRKVKALPLKGTGKHKYSFRHIEVPSYPIHFCDCEEHCGP--------- 191
Query: 195 HHPAAGQEEIHDMEELGASVIN----EEELNLMNSVMNKLFEREN 235
P E ASV+N E+E N+MNSVMNKLFE+EN
Sbjct: 192 --PEEANNEY-------ASVLNAAAYEKERNIMNSVMNKLFEKEN 227
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 69/162 (42%), Gaps = 29/162 (17%)
Query: 631 SKSNTAPNKSGKGSSWFQKSPWTQLVNEDNS-SFSITQISPGITFKKHDVPKTQLGKEVA 689
S NT + +G SW QKS W LV S SFSI+Q+ P ++ P + VA
Sbjct: 412 SAQNTGSIEPKRGYSWIQKSAWRDLVGGTGSASFSISQVLP------NNNPAPAVFSNVA 465
Query: 690 NP-NDKKSSKSVGQAGSKPITCASTALEDGKKGEIVSQIIPEKNQPTDVGDNEASASMVA 748
KSS++ Q S + ST+ D + E N+P V
Sbjct: 466 GSERSSKSSEATAQLLSS-VGTLSTSTADESTDHAIGGEPKESNKPQKV----------- 513
Query: 749 DKHDLTPRQTTNVDGTIGETCSFMRSAASIKEWSTAKAALSG 790
+ P+ T I E C FMR+ S K+W+ AK A++G
Sbjct: 514 ---RVVPKIT------ISEVCPFMRNTESQKQWAKAKKAVTG 546
>gi|326529095|dbj|BAK00941.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 599
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 161/454 (35%), Positives = 230/454 (50%), Gaps = 64/454 (14%)
Query: 14 TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKGRSFGYVDFFPSSHKSLSKLFSTY 73
TR++VGGL E V+ DL VF S+G V V+ VRT GRSF YVDF SHK+L+KLFSTY
Sbjct: 17 TRLFVGGLAEGVSAADLEAVFGSIGRVAGVEFVRTGGRSFAYVDFQCPSHKALAKLFSTY 76
Query: 74 NGCVWKGGRLRLERAKEHYLARLKREWAEDDAQLVNP--PVTDSVAPDNKDATRLDTPKK 131
NGC WKGG+L+LE+AKEHYL RLKREW ++ A P D V D ++ + K+
Sbjct: 77 NGCKWKGGKLKLEKAKEHYLVRLKREWEQEAAAAAAQEMPAKDDV--DKQE----EKEKR 130
Query: 132 LLDKD----KKLNIFFPRLRKVKTLPFCGTGKHKYSFQRVEAPPLPKYFCDCEEHSAAFH 187
LDKD K+NI+FPRLRK+K LPF G+GKHKYSF+ +E P P +FCDCEEH
Sbjct: 131 RLDKDALESSKVNIYFPRLRKLKPLPFKGSGKHKYSFRNIEVPSYPIHFCDCEEHCGPPE 190
Query: 188 AA--EGKQIHHPAAGQEEIHDMEELGASVINEEELNLMNSVMNKLFERENVSNAGLSGTE 245
A E + A Q+E + M + + + ++ + +S + K + S+A ++
Sbjct: 191 KANEEYAAVLKRVAFQKERNIMNSVMSKLFEKDTEQIDSSEVQKGDAETDPSDAEAEPSD 250
Query: 246 LTNYERNSYNFI-------------GDLQIGGNEVDSVADEY---NLVIN-AVSGGNNRM 288
+S N + DLQ+ E D ++E +LVIN A NN
Sbjct: 251 TETEPSDSDNDLRMEETTESHEEDLDDLQM--EETDDPSEEELDDDLVINIAPRKANNSA 308
Query: 289 V-LSRCQEKTTILPTNKKLT-LSEARTSKDRSAQ---SLPREQKKNDLLRSKKRKS---- 339
V L+R + KK E K R S PR QK++ + + +R +
Sbjct: 309 VQLNRANQSVKKDERFKKRQHFDEISPQKKRQKSEDLSEPRNQKQSTSVIADRRTTGKSL 368
Query: 340 ------LHNDEILMAASPLDDMNVQTNMNKPSTPLATQHAETDSGVRKSTASHS------ 387
+ N++ A S + +++ + Q +T +G +ST S
Sbjct: 369 PYVSVAIQNEQKSSALSGKGMHGFSSVLDRAKSSAGLQGVDTLTG--RSTKSEGSQNELP 426
Query: 388 --------WSQKMSWKALVGDKDSRAFSVSNILP 413
W+QK SW+ LVG + +FS+S +LP
Sbjct: 427 TEPKKGSVWTQKSSWRDLVGGMGATSFSISQVLP 460
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 76/170 (44%), Gaps = 31/170 (18%)
Query: 634 NTAPNKSGKGSSWFQKSPWTQLVN-EDNSSFSITQISPGITFKKHDVPKTQLGKE--VAN 690
N P + KGS W QKS W LV +SFSI+Q+ P PK + E VA
Sbjct: 423 NELPTEPKKGSVWTQKSSWRDLVGGMGATSFSISQVLPNTNPAP---PKLEPATETSVAC 479
Query: 691 PNDKKSSKSVGQAGSKPITCASTALEDGKKGEIVSQIIPEKNQPTDVGDNEASASMVADK 750
++ S+G T+LE E ++Q + ++N + G A ++ +
Sbjct: 480 TESRREVTSLGM----------TSLESP---EAITQPLAKQNLLSSTGTPSAGTTVGSAG 526
Query: 751 HDLT----------PRQTTNVDGTIGETCSFMRSAASIKEWSTAKAALSG 790
H++ PR + TI E C FMR+ SI++WS AK L+G
Sbjct: 527 HEIRGHDENNKVEEPRVVPRI--TISEVCPFMRNEESIQQWSKAKKVLTG 574
>gi|357138671|ref|XP_003570913.1| PREDICTED: uncharacterized protein LOC100845300 [Brachypodium
distachyon]
Length = 585
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 113/232 (48%), Positives = 139/232 (59%), Gaps = 41/232 (17%)
Query: 15 RIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKGRSFGYVDFFPSSHKSLSKLFSTYN 74
RI+VGGL E VT DL VF SLG V V VR+ GR F YVDF S K+L+KLFSTYN
Sbjct: 15 RIFVGGLAEGVTAADLGGVFGSLGRVAGVQFVRSSGRCFAYVDFHCPSDKALAKLFSTYN 74
Query: 75 GCVWKGGRLRLERAKEHYLARLKREWAEDDAQLVNPPVTDSV-------APDNKDATRLD 127
GC WKGG+L+LE+AKEHYL RLKREW ++ A V ++V PD KDA
Sbjct: 75 GCKWKGGKLKLEKAKEHYLVRLKREWEQEAAAAQEMAVKNNVEKQEEKPKPD-KDAL--- 130
Query: 128 TPKKLLDKDKKLNIFFPRLRKVKTLPFCGTGKHKYSFQRVEAPPLPKYFCDCEEHSAAFH 187
D K+NI+FP+LRK+K LPF G GKHKYSF+ +E P P +FCDCEEH
Sbjct: 131 --------DSKVNIYFPKLRKLKALPFKGCGKHKYSFRNIEVPSYPIHFCDCEEHCGP-- 180
Query: 188 AAEGKQIHHPAAGQEEIHDMEELGASVIN----EEELNLMNSVMNKLFEREN 235
P +E A+V+N E+E +MNSVM+KL E++N
Sbjct: 181 ---------PEKANDEY-------AAVLNRVAYEKERTIMNSVMSKLLEKDN 216
Score = 40.0 bits (92), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 68/165 (41%), Gaps = 28/165 (16%)
Query: 642 KGSSWFQKSPWTQLVN-EDNSSFSITQISPGIT--------FKKHDVPKTQLGKEVANPN 692
KGS W QKS W LV +SFS++Q+ P + V T+ +EV
Sbjct: 409 KGSIWTQKSAWRDLVGGMGGASFSLSQVLPNTNPAPPEPQNVTESSVSHTESRREVKL-- 466
Query: 693 DKKSSKSVGQAG-----SKPITCASTALEDGKKGEIVSQIIP--EKNQPTDVGDNEASAS 745
KS KS+G K ++ K G V EKN+ +V + A
Sbjct: 467 GVKSLKSLGATTEHSLEQKLLSSMGMPSTGTKVGSAVHDTGEHDEKNKVEEVHEENNKAE 526
Query: 746 MVADKHDLTPRQTTNVDGTIGETCSFMRSAASIKEWSTAKAALSG 790
V + P+ T I E C FMR+ S ++WS AK L+G
Sbjct: 527 QVR----VVPKIT------ISEVCPFMRNRESEQQWSKAKKVLTG 561
>gi|296081042|emb|CBI18323.3| unnamed protein product [Vitis vinifera]
Length = 218
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 91/192 (47%), Positives = 121/192 (63%), Gaps = 18/192 (9%)
Query: 59 FPSSHKSLSKLFSTYNGCVWKGGRLRLERAKEHYLARLKREWAEDDAQLVNPPVTDSVAP 118
FP SH + G WKGGRL+LE+AKEHYL L+REWAED ++ P ++S+
Sbjct: 30 FPHSHNLFPSSSARIMGTFWKGGRLKLEKAKEHYLVLLRREWAEDGELAISQP-SNSIDK 88
Query: 119 DNKDATRLDTPKKLLDKDK-KLNIFFPRLRKVKTLPFCGTGKHKYSFQRVEAPPLPKYFC 177
+ K + D PKK ++++K +L IFFP+L+K+K+LPF GTGKHKYSFQR+E P LP +FC
Sbjct: 89 NTKIVSS-DKPKKTVNREKSQLRIFFPKLKKMKSLPFSGTGKHKYSFQRIEVPSLPTHFC 147
Query: 178 DCEEHSAAFHAAEGKQI--HHPAAGQEEIHDMEELGASVINEEELNLMNSVMNKLFEREN 235
DCEEHS H A+ + P +G +N+EELN+MNSVMNK+FERE
Sbjct: 148 DCEEHSGPPHTAQKQYFCDREPQSGG-------------MNKEELNMMNSVMNKIFERET 194
Query: 236 VSNAGLSGTELT 247
+ T LT
Sbjct: 195 DLKVAYNVTGLT 206
>gi|302768210|ref|XP_002967525.1| hypothetical protein SELMODRAFT_408613 [Selaginella moellendorffii]
gi|300165516|gb|EFJ32124.1| hypothetical protein SELMODRAFT_408613 [Selaginella moellendorffii]
Length = 648
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/176 (46%), Positives = 103/176 (58%), Gaps = 23/176 (13%)
Query: 12 EQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKGRSFGYVDFFPSSHKSLSKLFS 71
E+ R++VGGLG V DL + F SLG V+AV+++R+ R F Y+DF SS +L K+FS
Sbjct: 3 EEVRLFVGGLGASVAAQDLERAFGSLGAVRAVEMIRSGDRDFAYIDFVASSPAALRKVFS 62
Query: 72 TYNGCVWKGGRLRLERAKEHYLARLKREWA---EDDAQLVNPPVTDSVAPDNKDATRLDT 128
TY GC WKGG LR+E AKEHYL RL+REWA ED KD + +
Sbjct: 63 TYKGCKWKGGCLRVELAKEHYLQRLEREWAAGRED---------------QKKDGEQKER 107
Query: 129 PKK-LLDKDKKLNIFFPRLRKVKTLPFCGTGKHKYSFQRVEAPPLPKY-FCDCEEH 182
PK ++ + L IFFPR RKVK + GKHK SF+R + PL C C EH
Sbjct: 108 PKMPIVPATRALKIFFPRSRKVKVVS---GGKHKRSFERCASHPLALLGLCSCGEH 160
>gi|302753512|ref|XP_002960180.1| hypothetical protein SELMODRAFT_402256 [Selaginella moellendorffii]
gi|300171119|gb|EFJ37719.1| hypothetical protein SELMODRAFT_402256 [Selaginella moellendorffii]
Length = 648
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 81/176 (46%), Positives = 102/176 (57%), Gaps = 23/176 (13%)
Query: 12 EQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKGRSFGYVDFFPSSHKSLSKLFS 71
E+ R++VGGLG V DL + F SLG V+AV+++R+ R F Y+DF SS +L K+FS
Sbjct: 3 EEVRLFVGGLGASVAAQDLERAFGSLGAVRAVEMIRSGDRDFAYIDFVASSPAALRKVFS 62
Query: 72 TYNGCVWKGGRLRLERAKEHYLARLKREWA---EDDAQLVNPPVTDSVAPDNKDATRLDT 128
TY GC WKGG LR+E AKEHYL RL+REWA ED KD +
Sbjct: 63 TYKGCKWKGGCLRVELAKEHYLQRLEREWAAGRED---------------QKKDGEQKQR 107
Query: 129 PKK-LLDKDKKLNIFFPRLRKVKTLPFCGTGKHKYSFQRVEAPPLPKY-FCDCEEH 182
PK ++ + L IFFPR RKVK + GKHK SF+R + PL C C EH
Sbjct: 108 PKMPIVPATRALKIFFPRSRKVKVVS---GGKHKRSFERCASHPLALLGLCSCGEH 160
>gi|168014085|ref|XP_001759586.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689125|gb|EDQ75498.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 972
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 68/109 (62%), Gaps = 9/109 (8%)
Query: 1 MEKKEAEAEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG---------R 51
+E ++ V+ + R++VGGLG V DL + F+ LG V +D+V K R
Sbjct: 78 IESRKETVPVQLKLRLFVGGLGPTVGVSDLQQRFAPLGVVHKIDLVPGKKDWSPEGAFQR 137
Query: 52 SFGYVDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERAKEHYLARLKREW 100
F YVDF S+ SL KLFS YNGC WKGG LR+E+AKEHY+ RL+REW
Sbjct: 138 GFAYVDFEASTEASLKKLFSAYNGCKWKGGVLRIEKAKEHYIDRLRREW 186
>gi|384252295|gb|EIE25771.1| hypothetical protein COCSUDRAFT_40047 [Coccomyxa subellipsoidea
C-169]
Length = 622
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 84/183 (45%), Gaps = 34/183 (18%)
Query: 14 TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK------------GRSFGYVDFFPS 61
TR++VGG+ + VT + +A+ F S G V++VD+ K R F YV P
Sbjct: 12 TRLFVGGIPQDVTQEQIAQRFKSFGTVQSVDLAPEKEGSVTAGPLVRSCRGFAYVQLTPK 71
Query: 62 SHKSLSKLFSTYNGCVWKGGRLRLERAKEHYLARLKREWAED-----DAQLVNPPVTDSV 116
+L + S YNGC W GG LR+E AK Y A+ E A+D + Q+ P DS
Sbjct: 72 DAAALHRCISMYNGCKWMGGVLRVEPAKPDYKAKFAAEEADDLCLELEGQIA-PEQPDSA 130
Query: 117 APDNKDAT--------RLDTPKKLLDKDKKLNIFFPRLRKVKTLPFCGTGKHKYSFQRVE 168
PD + R D K + + ++ +FP +++ + ++ VE
Sbjct: 131 MPDQPSSGEIPPLTIPRRDGKKTMKTQPNRVKTYFPPVKQPRA--------DDLAWGPVE 182
Query: 169 APP 171
APP
Sbjct: 183 APP 185
>gi|449663811|ref|XP_002155801.2| PREDICTED: nucleolar protein 8-like [Hydra magnipapillata]
Length = 760
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 60/99 (60%), Gaps = 7/99 (7%)
Query: 10 VEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG------RSFGYVDFFPSSH 63
+E+ R++VGGL VT+ DL F S GEVKAV +++ K ++FGYV +
Sbjct: 1 MEDSFRVFVGGLFSTVTEADLRDRFESFGEVKAVQLIQRKSEDGYVSKTFGYVTLMTTMQ 60
Query: 64 KSLSKLFSTYNGCVWKGGRLRLERAKEHYLARLKREWAE 102
K L+K F+ + G W G L+++ AKE ++ RLK+EW E
Sbjct: 61 K-LNKCFALFGGTKWNGHDLKVQLAKEDFITRLKKEWGE 98
>gi|224090617|ref|XP_002309035.1| predicted protein [Populus trichocarpa]
gi|222855011|gb|EEE92558.1| predicted protein [Populus trichocarpa]
Length = 163
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 72/135 (53%), Gaps = 20/135 (14%)
Query: 128 TPKKLLDKDKKLNIFFPRLRKVKTLPFCGTGKHKYSFQRVEAPPLPKYFCDCEEHSAAFH 187
T K+ L ++ +L +FFPRL KV+ + H++S +PPLPK+F DCE HS
Sbjct: 46 TSKQPLSENNQLRLFFPRLGKVEHWYY-----HRHS---CISPPLPKHFRDCEGHSGP-- 95
Query: 188 AAEGKQIHHPAAGQEEIHDMEELGASVINEEELNLMNSVMNKLFERENVSNAGLSGTELT 247
P I MEE GA ++ EELN+MNSVMNKLF+ E VS+ EL
Sbjct: 96 ---------PPPKHRHIPTMEEQGAG-MDGEELNMMNSVMNKLFQMEYVSDNTCREIELE 145
Query: 248 NYERNSYNFIGDLQI 262
N +S I + Q+
Sbjct: 146 NEVDDSIKTIDNSQL 160
>gi|307110873|gb|EFN59108.1| hypothetical protein CHLNCDRAFT_137899 [Chlorella variabilis]
Length = 790
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 78/180 (43%), Gaps = 25/180 (13%)
Query: 14 TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG--------RSFGYVDFFPSSHKS 65
R++VGGL VT DDL + F GEV I K R+FG+V+ P +
Sbjct: 2 VRLFVGGLPPGVTPDDLRQRFLPFGEVTECSIAPAKSYGPGVVFPRNFGHVELQPKDEAA 61
Query: 66 LSKLFSTYNGCVWKGGRLRLERAKEHYLARLKREWA-------EDDAQLVNPPVTDSVAP 118
L K + YNGC W+G +L+ A Y R ++E A D+A PP+
Sbjct: 62 LRKCIAAYNGCKWRGSQLKCAPAHPQYADRRRQEQATAAGGTSADEAAHALPPLGPG--- 118
Query: 119 DNKDATRLDTPKKLLDKDKKLNIFFPRLRKVKTLPFCGTGKHKYSFQRVEAPPLPKYFCD 178
D RL K + + RKV+ P + + + +++ +EAPP Y +
Sbjct: 119 ---DRLRLKPSKAA----TTIEVALGSGRKVQHFPEPPSQQVQLAWESLEAPPASGYLYE 171
>gi|196005091|ref|XP_002112412.1| hypothetical protein TRIADDRAFT_56401 [Trichoplax adhaerens]
gi|190584453|gb|EDV24522.1| hypothetical protein TRIADDRAFT_56401 [Trichoplax adhaerens]
Length = 543
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 59/93 (63%), Gaps = 7/93 (7%)
Query: 13 QTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDI-VRTK---GR--SFGYVDFFPSSHKSL 66
+ R+++GGL + VT+DD+ + F + G+++ V+I V+T GR +F Y+D + K+
Sbjct: 4 ERRVFIGGLHQDVTEDDIKRCFRTFGDIRNVEIKVKTNASGGRPNTFAYLDI-SITDKNF 62
Query: 67 SKLFSTYNGCVWKGGRLRLERAKEHYLARLKRE 99
+ STYN WKG +RL+ AK+++L RL E
Sbjct: 63 ERCLSTYNKARWKGNHMRLQLAKDNFLCRLNSE 95
>gi|320165890|gb|EFW42789.1| hypothetical protein CAOG_07921 [Capsaspora owczarzaki ATCC 30864]
Length = 975
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 15 RIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR----TKGRSFGYVDFFPSSHKSLSKLF 70
R+YVGGL +V++ D+ + F S G VKAV ++R + R F Y+D + SL K
Sbjct: 56 RLYVGGLPLEVSEHDVQERFKSFGAVKAVQLIRDHETGESRGFAYLDV-DYTENSLKKCM 114
Query: 71 STYNGCVWKGGRLRLERAKEHYLARLKREWAEDDA 105
S Y WKG +R++ AKE L RL+RE E A
Sbjct: 115 SVYANARWKGKLVRVQLAKESVLVRLQREREEAQA 149
>gi|122114635|ref|NP_001073671.1| nucleolar protein 8 [Danio rerio]
Length = 1176
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 58/113 (51%), Gaps = 11/113 (9%)
Query: 15 RIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG------RSFGYVDFFPSSHKSLSK 68
R+Y+GGLG VT+ DL F G+VK V+I+ K ++FGY++ + + +
Sbjct: 3 RLYIGGLGHTVTEKDLKDRFGKFGDVKDVEIITRKDDQGAPLKTFGYININITDAE-FKR 61
Query: 69 LFSTYNGCVWKGGRLRLERAKEHYLARLKREWAEDDAQLVNPPVTDSVAPDNK 121
N WKGG L ++ AKE +L RL AE+ Q V T +AP K
Sbjct: 62 CVGILNKSTWKGGTLLIQLAKESFLHRL----AEEREQQVEKIKTPKIAPQEK 110
>gi|344243696|gb|EGV99799.1| Nucleolar protein 8 [Cricetulus griseus]
Length = 1158
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 56/101 (55%), Gaps = 7/101 (6%)
Query: 12 EQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG------RSFGYVDFFPSSHKS 65
E R++VGGLG+ +++ DL FS GEV ++I+ K ++F YV+ +
Sbjct: 6 EMKRLFVGGLGQGISEADLQNQFSRFGEVSDIEIITRKDDQGNSQKAFAYVN-IKITEAD 64
Query: 66 LSKLFSTYNGCVWKGGRLRLERAKEHYLARLKREWAEDDAQ 106
L K S N WKGG L+++ AKE +L RL +E E A+
Sbjct: 65 LKKCMSILNKTKWKGGTLQIQLAKESFLHRLAQEREEAKAK 105
>gi|354486455|ref|XP_003505396.1| PREDICTED: nucleolar protein 8-like [Cricetulus griseus]
Length = 1458
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 56/101 (55%), Gaps = 7/101 (6%)
Query: 12 EQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG------RSFGYVDFFPSSHKS 65
E R++VGGLG+ +++ DL FS GEV ++I+ K ++F YV+ +
Sbjct: 306 EMKRLFVGGLGQGISEADLQNQFSRFGEVSDIEIITRKDDQGNSQKAFAYVN-IKITEAD 364
Query: 66 LSKLFSTYNGCVWKGGRLRLERAKEHYLARLKREWAEDDAQ 106
L K S N WKGG L+++ AKE +L RL +E E A+
Sbjct: 365 LKKCMSILNKTKWKGGTLQIQLAKESFLHRLAQEREEAKAK 405
>gi|291383440|ref|XP_002708222.1| PREDICTED: nucleolar protein 8 [Oryctolagus cuniculus]
Length = 1102
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 56/104 (53%), Gaps = 7/104 (6%)
Query: 12 EQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG------RSFGYVDFFPSSHKS 65
E R++VGGLG+ +++ DL FS GEV V+I+ K + F YV+ +
Sbjct: 6 ETKRLFVGGLGQTISEADLQNQFSRFGEVSDVEIITRKDDQGNPQKVFAYVN-IRIAEGD 64
Query: 66 LSKLFSTYNGCVWKGGRLRLERAKEHYLARLKREWAEDDAQLVN 109
L K S N WKGG L+++ AKE +L RL +E E A+ N
Sbjct: 65 LKKCMSVLNKTKWKGGTLQIQLAKESFLHRLAQEREEAKAKKEN 108
>gi|327265899|ref|XP_003217745.1| PREDICTED: nucleolar protein 8-like [Anolis carolinensis]
Length = 1101
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 50/94 (53%), Gaps = 7/94 (7%)
Query: 15 RIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG------RSFGYVDFFPSSHKSLSK 68
R+YVGGLG V+ +L + F G V +I+ K ++F Y++ S K L K
Sbjct: 16 RLYVGGLGHTVSKVELQERFGKFGNVTDTEILTRKDEQGNPTKTFAYINI-KISEKELKK 74
Query: 69 LFSTYNGCVWKGGRLRLERAKEHYLARLKREWAE 102
S N WKGG L++E AKE +L RL RE E
Sbjct: 75 CISVLNKTKWKGGTLQIEMAKESFLHRLARERQE 108
>gi|410919185|ref|XP_003973065.1| PREDICTED: nucleolar protein 8-like [Takifugu rubripes]
Length = 877
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 54/91 (59%), Gaps = 7/91 (7%)
Query: 15 RIYVGGLGEKVTDDDLAKVFSSLGEVKAVDI-VR--TKG---RSFGYVDFFPSSHKSLSK 68
R+YVGGL VT DL F G+V+ V++ +R T+G ++FGY++ S +L +
Sbjct: 3 RLYVGGLSHTVTQKDLKDRFGKFGDVEDVELRIRRDTEGVPYKTFGYINI-NISDANLKR 61
Query: 69 LFSTYNGCVWKGGRLRLERAKEHYLARLKRE 99
FS N WKGG LR+E AKE +L RL E
Sbjct: 62 CFSVLNKSKWKGGTLRIEIAKESFLQRLAEE 92
>gi|160774200|gb|AAI55214.1| Si:ch211-103f16.2 protein [Danio rerio]
Length = 516
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 57/113 (50%), Gaps = 11/113 (9%)
Query: 15 RIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG------RSFGYVDFFPSSHKSLSK 68
R+Y+GGLG VT+ DL F G+VK V+I+ K ++FGY++ + +
Sbjct: 3 RLYIGGLGHTVTEKDLKDRFGKFGDVKDVEIITRKDDQGAPLKTFGYIN-INITDAEFKR 61
Query: 69 LFSTYNGCVWKGGRLRLERAKEHYLARLKREWAEDDAQLVNPPVTDSVAPDNK 121
N WKGG L ++ AKE +L RL AE+ Q V T +AP K
Sbjct: 62 CVGILNKSTWKGGTLLIQLAKESFLHRL----AEEREQQVEKIKTPKIAPQEK 110
>gi|109112292|ref|XP_001102499.1| PREDICTED: nucleolar protein 8 isoform 2 [Macaca mulatta]
Length = 1166
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 54/101 (53%), Gaps = 7/101 (6%)
Query: 12 EQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG------RSFGYVDFFPSSHKS 65
E R+YVGGL + +++ DL FS GEV V+I+ K + F Y++ +
Sbjct: 6 ETKRLYVGGLSQNISEADLQNQFSRFGEVSDVEIITRKDDQGNPQKVFAYIN-ISVAEAD 64
Query: 66 LSKLFSTYNGCVWKGGRLRLERAKEHYLARLKREWAEDDAQ 106
L K S N WKGG L+++ AKE +L RL +E E A+
Sbjct: 65 LKKCMSVLNKTKWKGGTLQIQLAKESFLHRLAQEREEAKAK 105
>gi|417406000|gb|JAA49682.1| Putative nucleolar protein 8 [Desmodus rotundus]
Length = 1150
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 55/101 (54%), Gaps = 7/101 (6%)
Query: 12 EQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG------RSFGYVDFFPSSHKS 65
E R++VGG+G+ +++ DL FS GEV V+I+ K + F Y++ +
Sbjct: 6 ETKRLFVGGIGQNISEADLQNQFSRFGEVSDVEIITRKDDQGNPQKVFAYIN-IRGAETD 64
Query: 66 LSKLFSTYNGCVWKGGRLRLERAKEHYLARLKREWAEDDAQ 106
L K S N WKGG L+++ AKE +L RL +E E A+
Sbjct: 65 LKKCVSVLNKTKWKGGTLQIQLAKESFLQRLAQEREEAKAK 105
>gi|355567930|gb|EHH24271.1| Nucleolar protein Nop132 [Macaca mulatta]
Length = 1172
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 54/101 (53%), Gaps = 7/101 (6%)
Query: 12 EQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG------RSFGYVDFFPSSHKS 65
E R+YVGGL + +++ DL FS GEV V+I+ K + F Y++ +
Sbjct: 6 ETKRLYVGGLSQNISEADLQNQFSRFGEVSDVEIITRKDDQGNPQKVFAYIN-ISVAEAD 64
Query: 66 LSKLFSTYNGCVWKGGRLRLERAKEHYLARLKREWAEDDAQ 106
L K S N WKGG L+++ AKE +L RL +E E A+
Sbjct: 65 LKKCMSVLNKTKWKGGTLQIQLAKESFLHRLAQEREEAKAK 105
>gi|403294563|ref|XP_003938247.1| PREDICTED: nucleolar protein 8-like [Saimiri boliviensis
boliviensis]
Length = 1170
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 54/101 (53%), Gaps = 7/101 (6%)
Query: 12 EQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG------RSFGYVDFFPSSHKS 65
E R+YVGGL + +++ DL FS G+V VDI+ K + F Y++ +
Sbjct: 6 ETKRLYVGGLSQDISEADLQNQFSRFGDVSDVDIITRKDDQGNPQKVFAYIN-ISVAEAD 64
Query: 66 LSKLFSTYNGCVWKGGRLRLERAKEHYLARLKREWAEDDAQ 106
L K S N WKGG L+++ AKE +L RL +E E A+
Sbjct: 65 LKKCMSVLNKTKWKGGTLQIQLAKESFLHRLAQEREEAKAK 105
>gi|350581943|ref|XP_003354722.2| PREDICTED: nucleolar protein 8 [Sus scrofa]
Length = 1009
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 58/111 (52%), Gaps = 7/111 (6%)
Query: 11 EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG------RSFGYVDFFPSSHK 64
+E R++VGGLG+ +++ DL F+ GEV V+I+ K + F YV+ +
Sbjct: 5 KETKRLFVGGLGQNISEGDLQNQFNRFGEVSDVEIITRKDDQGNPQKVFAYVN-IRIAEA 63
Query: 65 SLSKLFSTYNGCVWKGGRLRLERAKEHYLARLKREWAEDDAQLVNPPVTDS 115
L K S N WKGG L+++ AKE +L RL +E E A P ++
Sbjct: 64 DLKKCMSVLNKTKWKGGTLQIQLAKESFLHRLAQEREEAKAAKEKPTAVNT 114
>gi|355753465|gb|EHH57511.1| Nucleolar protein Nop132 [Macaca fascicularis]
Length = 1172
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 54/101 (53%), Gaps = 7/101 (6%)
Query: 12 EQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG------RSFGYVDFFPSSHKS 65
E R+YVGGL + +++ DL FS GEV V+I+ K + F Y++ +
Sbjct: 6 ETKRLYVGGLSQNISEADLQNQFSRFGEVSDVEIITRKDDQGNPQKVFAYIN-ISVAEAD 64
Query: 66 LSKLFSTYNGCVWKGGRLRLERAKEHYLARLKREWAEDDAQ 106
L K S N WKGG L+++ AKE +L RL +E E A+
Sbjct: 65 LKKCMSVLNKTKWKGGTLQIQLAKESFLHRLAQEREEAKAK 105
>gi|26325894|dbj|BAC26701.1| unnamed protein product [Mus musculus]
Length = 971
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 12 EQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG------RSFGYVDFFPSSHKS 65
E R++VGGLG+ +++ DL F GEV V+I+ K + F YV+ +
Sbjct: 24 EMKRLFVGGLGQGISETDLQNQFGRFGEVSDVEIITRKDDQGNSQKVFAYVN-IQITEAD 82
Query: 66 LSKLFSTYNGCVWKGGRLRLERAKEHYLARLKRE 99
L K S N WKGG L+++ AKE +L RL +E
Sbjct: 83 LKKCMSILNKTKWKGGTLQIQLAKESFLHRLAQE 116
>gi|165971094|gb|AAI58268.1| LOC100135171 protein [Xenopus (Silurana) tropicalis]
Length = 407
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 53/100 (53%), Gaps = 7/100 (7%)
Query: 15 RIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG------RSFGYVDFFPSSHKSLSK 68
R+YVGG+G VTD +L F G+V V+I+ K ++F Y++ S L K
Sbjct: 7 RLYVGGIGPSVTDSELTDRFGKFGKVNDVEIITRKDEKGNPVKAFAYLN-ISISESDLKK 65
Query: 69 LFSTYNGCVWKGGRLRLERAKEHYLARLKREWAEDDAQLV 108
S N WKGG L++E AKE +L RL +E E Q +
Sbjct: 66 CMSALNKTKWKGGVLQIELAKESFLNRLAQERQEAKNQSI 105
>gi|402898000|ref|XP_003912023.1| PREDICTED: nucleolar protein 8 [Papio anubis]
Length = 1131
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 54/101 (53%), Gaps = 7/101 (6%)
Query: 12 EQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG------RSFGYVDFFPSSHKS 65
E R+YVGGL + +++ DL FS GEV V+I+ K + F Y++ +
Sbjct: 6 ETKRLYVGGLSQNISEADLQNQFSRFGEVSDVEIITRKDDQGNPQKVFAYIN-ISVAEAD 64
Query: 66 LSKLFSTYNGCVWKGGRLRLERAKEHYLARLKREWAEDDAQ 106
L K S N WKGG L+++ AKE +L RL +E E A+
Sbjct: 65 LKKCMSVLNKTKWKGGTLQIQLAKESFLHRLAQEREEAKAK 105
>gi|406353182|ref|NP_001258326.1| nucleolar protein 8 [Mus musculus]
Length = 1165
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 12 EQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG------RSFGYVDFFPSSHKS 65
E R++VGGLG+ +++ DL F GEV V+I+ K + F YV+ +
Sbjct: 24 EMKRLFVGGLGQGISETDLQNQFGRFGEVSDVEIITRKDDQGNSQKVFAYVN-IQITEAD 82
Query: 66 LSKLFSTYNGCVWKGGRLRLERAKEHYLARLKRE 99
L K S N WKGG L+++ AKE +L RL +E
Sbjct: 83 LKKCMSILNKTKWKGGTLQIQLAKESFLHRLAQE 116
>gi|12853154|dbj|BAB29660.1| unnamed protein product [Mus musculus]
Length = 552
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 12 EQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG------RSFGYVDFFPSSHKS 65
E R++VGGLG+ +++ DL F GEV V+I+ K + F YV+ +
Sbjct: 24 EMKRLFVGGLGQGISETDLQNQFGRFGEVSDVEIITRKDDQGNSQKVFAYVN-IQITEAD 82
Query: 66 LSKLFSTYNGCVWKGGRLRLERAKEHYLARLKRE 99
L K S N WKGG L+++ AKE +L RL +E
Sbjct: 83 LKKCMSILNKTKWKGGTLQIQLAKESFLHRLAQE 116
>gi|74151233|dbj|BAE27736.1| unnamed protein product [Mus musculus]
Length = 1147
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 12 EQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG------RSFGYVDFFPSSHKS 65
E R++VGGLG+ +++ DL F GEV V+I+ K + F YV+ +
Sbjct: 6 EMKRLFVGGLGQGISETDLQNQFGRFGEVSDVEIITRKDDQGNSQKVFAYVN-IQITEAD 64
Query: 66 LSKLFSTYNGCVWKGGRLRLERAKEHYLARLKRE 99
L K S N WKGG L+++ AKE +L RL +E
Sbjct: 65 LKKCMSILNKTKWKGGTLQIQLAKESFLHRLAQE 98
>gi|108860822|sp|Q3UHX0.2|NOL8_MOUSE RecName: Full=Nucleolar protein 8
gi|116138557|gb|AAI25576.1| Nol8 protein [Mus musculus]
gi|116138920|gb|AAI25580.1| Nol8 protein [Mus musculus]
Length = 1147
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 12 EQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG------RSFGYVDFFPSSHKS 65
E R++VGGLG+ +++ DL F GEV V+I+ K + F YV+ +
Sbjct: 6 EMKRLFVGGLGQGISETDLQNQFGRFGEVSDVEIITRKDDQGNSQKVFAYVN-IQITEAD 64
Query: 66 LSKLFSTYNGCVWKGGRLRLERAKEHYLARLKRE 99
L K S N WKGG L+++ AKE +L RL +E
Sbjct: 65 LKKCMSILNKTKWKGGTLQIQLAKESFLHRLAQE 98
>gi|426219845|ref|XP_004004128.1| PREDICTED: nucleolar protein 8 [Ovis aries]
Length = 1162
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 54/101 (53%), Gaps = 7/101 (6%)
Query: 12 EQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG------RSFGYVDFFPSSHKS 65
E R++VGGLG+ ++ DL FS GEV V+I+ K + F Y++ +
Sbjct: 6 EMKRLFVGGLGQNISKADLQNQFSRFGEVSDVEIITRKDDQGNPQKVFAYIN-IRVTEGD 64
Query: 66 LSKLFSTYNGCVWKGGRLRLERAKEHYLARLKREWAEDDAQ 106
L K S N WKGG L+++ AKE +L RL +E E A+
Sbjct: 65 LKKCMSVLNKTKWKGGTLQIQLAKESFLHRLAQEREEARAK 105
>gi|50949826|emb|CAH10464.1| hypothetical protein [Homo sapiens]
Length = 1085
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 12 EQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG------RSFGYVDFFPSSHKS 65
E R+YVGGL + +++ DL FS GEV V+I+ K + F Y++ +
Sbjct: 6 ETKRLYVGGLSQDISEADLQNQFSGFGEVSDVEIITRKDDQGNPQKVFAYIN-ISVAEAD 64
Query: 66 LSKLFSTYNGCVWKGGRLRLERAKEHYLARLKRE 99
L K S N WKGG L+++ AKE +L RL +E
Sbjct: 65 LKKCMSVLNKTKWKGGTLQIQLAKESFLHRLAQE 98
>gi|380814180|gb|AFE78964.1| nucleolar protein 8 [Macaca mulatta]
Length = 1168
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 12 EQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG------RSFGYVDFFPSSHKS 65
E R+YVGGL + +++ DL FS GEV V+I+ K + F Y++ +
Sbjct: 6 ETKRLYVGGLSQNISEADLQNQFSRFGEVSDVEIITRKDDQGNPQKVFAYIN-ISVAEAD 64
Query: 66 LSKLFSTYNGCVWKGGRLRLERAKEHYLARLKRE 99
L K S N WKGG L+++ AKE +L RL +E
Sbjct: 65 LKKCMSVLNKTKWKGGTLQIQLAKESFLHRLAQE 98
>gi|194386874|dbj|BAG59803.1| unnamed protein product [Homo sapiens]
Length = 933
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 12 EQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG------RSFGYVDFFPSSHKS 65
E R+YVGGL + +++ DL FS GEV V+I+ K + F Y++ +
Sbjct: 6 ETKRLYVGGLSQDISEADLQNQFSRFGEVSDVEIITRKDDQGNPQKVFAYIN-ISVAEAD 64
Query: 66 LSKLFSTYNGCVWKGGRLRLERAKEHYLARLKRE 99
L K S N WKGG L+++ AKE +L RL +E
Sbjct: 65 LKKCMSVLNKTKWKGGTLQIQLAKESFLHRLAQE 98
>gi|380814182|gb|AFE78965.1| nucleolar protein 8 [Macaca mulatta]
Length = 1166
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 12 EQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG------RSFGYVDFFPSSHKS 65
E R+YVGGL + +++ DL FS GEV V+I+ K + F Y++ +
Sbjct: 6 ETKRLYVGGLSQNISEADLQNQFSRFGEVSDVEIITRKDDQGNPQKVFAYIN-ISVAEAD 64
Query: 66 LSKLFSTYNGCVWKGGRLRLERAKEHYLARLKRE 99
L K S N WKGG L+++ AKE +L RL +E
Sbjct: 65 LKKCMSVLNKTKWKGGTLQIQLAKESFLHRLAQE 98
>gi|46048234|ref|NP_060418.4| nucleolar protein 8 isoform a [Homo sapiens]
gi|74758950|sp|Q76FK4.1|NOL8_HUMAN RecName: Full=Nucleolar protein 8; AltName: Full=Nucleolar
protein Nop132
gi|45259447|dbj|BAD12268.1| nucleolar protein 8 [Homo sapiens]
Length = 1167
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 12 EQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG------RSFGYVDFFPSSHKS 65
E R+YVGGL + +++ DL FS GEV V+I+ K + F Y++ +
Sbjct: 6 ETKRLYVGGLSQDISEADLQNQFSRFGEVSDVEIITRKDDQGNPQKVFAYIN-ISVAEAD 64
Query: 66 LSKLFSTYNGCVWKGGRLRLERAKEHYLARLKRE 99
L K S N WKGG L+++ AKE +L RL +E
Sbjct: 65 LKKCMSVLNKTKWKGGTLQIQLAKESFLHRLAQE 98
>gi|410042873|ref|XP_003312216.2| PREDICTED: nucleolar protein 8 [Pan troglodytes]
gi|410226524|gb|JAA10481.1| nucleolar protein 8 [Pan troglodytes]
gi|410252162|gb|JAA14048.1| nucleolar protein 8 [Pan troglodytes]
gi|410308776|gb|JAA32988.1| nucleolar protein 8 [Pan troglodytes]
gi|410339505|gb|JAA38699.1| nucleolar protein 8 [Pan troglodytes]
Length = 1169
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 12 EQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG------RSFGYVDFFPSSHKS 65
E R+YVGGL + +++ DL FS GEV V+I+ K + F Y++ +
Sbjct: 6 ETKRLYVGGLSQDISEADLQNQFSRFGEVSDVEIITRKDDQGNPQKVFAYIN-ISVAEAD 64
Query: 66 LSKLFSTYNGCVWKGGRLRLERAKEHYLARLKRE 99
L K S N WKGG L+++ AKE +L RL +E
Sbjct: 65 LKKCMSVLNKTKWKGGTLQIQLAKESFLHRLAQE 98
>gi|119583218|gb|EAW62814.1| nucleolar protein 8, isoform CRA_a [Homo sapiens]
gi|119583220|gb|EAW62816.1| nucleolar protein 8, isoform CRA_a [Homo sapiens]
Length = 1173
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 12 EQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG------RSFGYVDFFPSSHKS 65
E R+YVGGL + +++ DL FS GEV V+I+ K + F Y++ +
Sbjct: 6 ETKRLYVGGLSQDISEADLQNQFSRFGEVSDVEIITRKDDQGNPQKVFAYIN-ISVAEAD 64
Query: 66 LSKLFSTYNGCVWKGGRLRLERAKEHYLARLKRE 99
L K S N WKGG L+++ AKE +L RL +E
Sbjct: 65 LKKCMSVLNKTKWKGGTLQIQLAKESFLHRLAQE 98
>gi|440900965|gb|ELR51984.1| Nucleolar protein 8 [Bos grunniens mutus]
Length = 1161
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 12 EQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG------RSFGYVDFFPSSHKS 65
E R++VGGLG+ +++ DL F GEV V+I+ K + F Y++ +
Sbjct: 6 EMKRLFVGGLGQNISEADLQNQFGRFGEVSDVEIITRKDDQGNPQKVFAYIN-IRVTEAD 64
Query: 66 LSKLFSTYNGCVWKGGRLRLERAKEHYLARLKREWAE 102
L K S N WKGG L+++ AKE +L RL +E E
Sbjct: 65 LKKCMSVLNKTKWKGGTLQIQLAKESFLHRLAQEREE 101
>gi|300794930|ref|NP_001178142.1| nucleolar protein 8 [Bos taurus]
gi|296484481|tpg|DAA26596.1| TPA: nucleolar protein 8 [Bos taurus]
Length = 1160
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 12 EQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG------RSFGYVDFFPSSHKS 65
E R++VGGLG+ +++ DL F GEV V+I+ K + F Y++ +
Sbjct: 6 EMKRLFVGGLGQNISEADLQNQFGRFGEVSDVEIITRKDDQGNPQKVFAYIN-IRVTEAD 64
Query: 66 LSKLFSTYNGCVWKGGRLRLERAKEHYLARLKREWAE 102
L K S N WKGG L+++ AKE +L RL +E E
Sbjct: 65 LKKCMSVLNKTKWKGGTLQIQLAKESFLHRLAQEREE 101
>gi|119583219|gb|EAW62815.1| nucleolar protein 8, isoform CRA_b [Homo sapiens]
Length = 1138
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 12 EQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG------RSFGYVDFFPSSHKS 65
E R+YVGGL + +++ DL FS GEV V+I+ K + F Y++ +
Sbjct: 6 ETKRLYVGGLSQDISEADLQNQFSRFGEVSDVEIITRKDDQGNPQKVFAYIN-ISVAEAD 64
Query: 66 LSKLFSTYNGCVWKGGRLRLERAKEHYLARLKRE 99
L K S N WKGG L+++ AKE +L RL +E
Sbjct: 65 LKKCMSVLNKTKWKGGTLQIQLAKESFLHRLAQE 98
>gi|37805819|dbj|BAC99315.1| Nop132 [Homo sapiens]
Length = 1167
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 12 EQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG------RSFGYVDFFPSSHKS 65
E R+YVGGL + +++ DL FS GEV V+I+ K + F Y++ +
Sbjct: 6 ETKRLYVGGLSQDISEADLQNQFSRFGEVSDVEIITRKDDQGNPQKVFAYIN-ISVAEAD 64
Query: 66 LSKLFSTYNGCVWKGGRLRLERAKEHYLARLKRE 99
L K S N WKGG L+++ AKE +L RL +E
Sbjct: 65 LKKCISVLNKTKWKGGTLQIQLAKESFLHRLAQE 98
>gi|301784637|ref|XP_002927732.1| PREDICTED: nucleolar protein 8-like [Ailuropoda melanoleuca]
Length = 1142
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 53/94 (56%), Gaps = 7/94 (7%)
Query: 12 EQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG------RSFGYVDFFPSSHKS 65
E R++VGGLG+ +++ DL FS GEV V+I+ K + F Y++ +
Sbjct: 6 EVRRLFVGGLGQNISETDLQNQFSRFGEVSDVEIITRKDDQGNPQKVFAYINIR-VAEAD 64
Query: 66 LSKLFSTYNGCVWKGGRLRLERAKEHYLARLKRE 99
L+K S N WKGG L+++ AKE +L RL +E
Sbjct: 65 LNKCMSALNKTKWKGGTLQIQLAKESFLHRLAQE 98
>gi|308800052|ref|XP_003074807.1| Hsp27-ERE-TATA-binding protein/Scaffold attachment factor (SAF-B)
(ISS) [Ostreococcus tauri]
gi|116061347|emb|CAL52065.1| Hsp27-ERE-TATA-binding protein/Scaffold attachment factor (SAF-B)
(ISS) [Ostreococcus tauri]
Length = 123
Score = 65.9 bits (159), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 8/106 (7%)
Query: 2 EKKEAEAEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG--------RSF 53
+ ++ E R++VGGL VT DL + F+ GEV VD++ K R F
Sbjct: 9 QDRDENLECNSGRRLFVGGLAPDVTAADLRRRFAPFGEVLCVDLILDKCAMMGESPCRGF 68
Query: 54 GYVDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERAKEHYLARLKRE 99
+V+ S L + ST N C W+G + + RA+ Y+ R++RE
Sbjct: 69 AFVELRVSDDVKLGRCISTLNRCTWRGREMVVARAQPSYMERMRRE 114
>gi|395844748|ref|XP_003795115.1| PREDICTED: nucleolar protein 8 [Otolemur garnettii]
Length = 580
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 54/101 (53%), Gaps = 7/101 (6%)
Query: 12 EQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG------RSFGYVDFFPSSHKS 65
E R++VGGL E V++ DL FS GEV V+I+ K + F Y++ +
Sbjct: 6 EPKRLFVGGLSETVSETDLQNQFSRFGEVSDVEIITRKDDQGNPQKIFAYIN-IKVAEAD 64
Query: 66 LSKLFSTYNGCVWKGGRLRLERAKEHYLARLKREWAEDDAQ 106
L K S N WKGG L+++ AKE +L RL +E E A+
Sbjct: 65 LKKCMSVLNKTKWKGGTLQIQLAKESFLHRLAQEREEAKAK 105
>gi|281343933|gb|EFB19517.1| hypothetical protein PANDA_017544 [Ailuropoda melanoleuca]
Length = 1155
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 53/94 (56%), Gaps = 7/94 (7%)
Query: 12 EQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG------RSFGYVDFFPSSHKS 65
E R++VGGLG+ +++ DL FS GEV V+I+ K + F Y++ +
Sbjct: 6 EVRRLFVGGLGQNISETDLQNQFSRFGEVSDVEIITRKDDQGNPQKVFAYINIR-VAEAD 64
Query: 66 LSKLFSTYNGCVWKGGRLRLERAKEHYLARLKRE 99
L+K S N WKGG L+++ AKE +L RL +E
Sbjct: 65 LNKCMSALNKTKWKGGTLQIQLAKESFLHRLAQE 98
>gi|55726293|emb|CAH89918.1| hypothetical protein [Pongo abelii]
Length = 900
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 12 EQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG------RSFGYVDFFPSSHKS 65
E R+YVGGL + +++ DL FS GEV V+I+ K + F Y++ +
Sbjct: 6 ETKRLYVGGLSQDISEADLQNQFSRFGEVSDVEIITRKDDQGNPQKVFAYIN-INVAEAD 64
Query: 66 LSKLFSTYNGCVWKGGRLRLERAKEHYLARLKRE 99
L K S N WKGG L+++ AKE +L RL +E
Sbjct: 65 LKKCMSVLNKTKWKGGTLQIQLAKESFLHRLAQE 98
>gi|441593211|ref|XP_003260545.2| PREDICTED: nucleolar protein 8 isoform 1 [Nomascus leucogenys]
Length = 1168
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 12 EQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG------RSFGYVDFFPSSHKS 65
E R+YVGGL + +++ DL FS GEV V+I+ K + F Y++ +
Sbjct: 6 ETKRLYVGGLSQNISEADLQNQFSRFGEVSDVEIITRKDDQGNPQKVFAYIN-ISVAEAD 64
Query: 66 LSKLFSTYNGCVWKGGRLRLERAKEHYLARLKRE 99
L K S N WKGG L+++ AKE +L RL +E
Sbjct: 65 LKKCMSVLNKTKWKGGTLQIQLAKESFLHRLAQE 98
>gi|157822307|ref|NP_001101878.1| nucleolar protein 8 [Rattus norvegicus]
gi|392354201|ref|XP_003751702.1| PREDICTED: nucleolar protein 8-like [Rattus norvegicus]
gi|149045019|gb|EDL98105.1| nucleolar protein 8 (predicted) [Rattus norvegicus]
Length = 1153
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 54/101 (53%), Gaps = 7/101 (6%)
Query: 12 EQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG------RSFGYVDFFPSSHKS 65
E R++VGGLG+ +++ DL S GEV V+I+ + + F YV+ +
Sbjct: 24 EMKRLFVGGLGQGISETDLQSQLSRFGEVSDVEIITRRDDQGNSQKVFAYVN-IQITESD 82
Query: 66 LSKLFSTYNGCVWKGGRLRLERAKEHYLARLKREWAEDDAQ 106
L K S N WKGG L+++ AKE +L RL +E E A+
Sbjct: 83 LKKCMSILNKTKWKGGTLQIQLAKESFLHRLAQEREEAKAK 123
>gi|197098416|ref|NP_001127235.1| nucleolar protein 8 [Pongo abelii]
gi|55726654|emb|CAH90090.1| hypothetical protein [Pongo abelii]
Length = 1167
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 12 EQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG------RSFGYVDFFPSSHKS 65
E R+YVGGL + +++ DL FS GEV V+I+ K + F Y++ +
Sbjct: 6 ETKRLYVGGLSQDISEADLQNQFSRFGEVSDVEIITRKDDQGNPQKVFAYIN-INVAEAD 64
Query: 66 LSKLFSTYNGCVWKGGRLRLERAKEHYLARLKRE 99
L K S N WKGG L+++ AKE +L RL +E
Sbjct: 65 LKKCMSVLNKTKWKGGTLQIQLAKESFLHRLAQE 98
>gi|7022076|dbj|BAA91479.1| unnamed protein product [Homo sapiens]
Length = 427
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 12 EQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG------RSFGYVDFFPSSHKS 65
E R+YVGGL + +++ DL FS GEV V+I+ K + F Y++ +
Sbjct: 6 ETKRLYVGGLSQDISEADLQNQFSRFGEVSDVEIITRKDDQGNPQKVFAYIN-ISVAEAD 64
Query: 66 LSKLFSTYNGCVWKGGRLRLERAKEHYLARLKRE 99
L K S N WKGG L+++ AKE +L RL +E
Sbjct: 65 LKKCISVLNKTKWKGGTLQIQLAKESFLHRLAQE 98
>gi|348520396|ref|XP_003447714.1| PREDICTED: nucleolar protein 8-like [Oreochromis niloticus]
Length = 1045
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 56/107 (52%), Gaps = 9/107 (8%)
Query: 15 RIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG-------RSFGYVDFFPSSHKSLS 67
R+YVGGL VT+ DL F G V+ V++ RT+ ++FGYV+ S L
Sbjct: 3 RLYVGGLSHTVTEKDLKDRFGKFGAVEDVEL-RTRKDPEGVPYKTFGYVNI-NISDADLK 60
Query: 68 KLFSTYNGCVWKGGRLRLERAKEHYLARLKREWAEDDAQLVNPPVTD 114
K + N WKGG L++E AKE +L RL +E E Q + P +
Sbjct: 61 KCLTVLNKSKWKGGTLQIEIAKESFLHRLAQERQEAAEQRLQQPAAE 107
>gi|410977929|ref|XP_003995351.1| PREDICTED: nucleolar protein 8 [Felis catus]
Length = 1151
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 7/101 (6%)
Query: 12 EQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG------RSFGYVDFFPSSHKS 65
E R++VGGLG+ ++ DL FS GEV V+I+ K + F Y++ +
Sbjct: 6 EVKRLFVGGLGQNISRADLQNQFSRFGEVSDVEIITRKDDKGNPQKVFAYINIR-LAEAD 64
Query: 66 LSKLFSTYNGCVWKGGRLRLERAKEHYLARLKREWAEDDAQ 106
L+K S N WKGG L+++ AKE +L RL +E E A+
Sbjct: 65 LNKCMSVLNKTKWKGGTLQIQLAKESFLHRLAQEREEAKAK 105
>gi|348565069|ref|XP_003468326.1| PREDICTED: nucleolar protein 8-like [Cavia porcellus]
Length = 1154
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 53/101 (52%), Gaps = 7/101 (6%)
Query: 12 EQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG------RSFGYVDFFPSSHKS 65
E R++VGGL + ++ DL FS GEV V+I+ K + F YV+ +
Sbjct: 6 ETKRLFVGGLSQAISKTDLQNQFSRFGEVSDVEIITRKDDQGNAQKVFAYVNIR-VAEAD 64
Query: 66 LSKLFSTYNGCVWKGGRLRLERAKEHYLARLKREWAEDDAQ 106
L K S N WKGG L+++ AKE +L RL +E E A+
Sbjct: 65 LKKCMSILNKTKWKGGTLQIQLAKESFLHRLAQEREEAKAR 105
>gi|334349396|ref|XP_001379524.2| PREDICTED: nucleolar protein 8-like [Monodelphis domestica]
Length = 1120
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 7/91 (7%)
Query: 15 RIYVGGLGEKVTDDDLAKVFSSLGEVKAV------DIVRTKGRSFGYVDFFPSSHKSLSK 68
R++VGGLG VT DD+ S G V +V D++ ++F YV+ S +L +
Sbjct: 9 RLFVGGLGPTVTQDDVRAQLSRFGAVSSVELVSRVDVLGNPEKTFAYVNV-ALSEAALQR 67
Query: 69 LFSTYNGCVWKGGRLRLERAKEHYLARLKRE 99
S N WKGG L+++ AKE +L RL +E
Sbjct: 68 CLSALNKTAWKGGTLQVQLAKESFLHRLAKE 98
>gi|86438313|gb|AAI12618.1| NOL8 protein [Bos taurus]
Length = 294
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 12 EQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG------RSFGYVDFFPSSHKS 65
E R++VGGLG+ +++ DL F GEV V+I+ K + F Y++ +
Sbjct: 6 EMKRLFVGGLGQNISEADLQNQFGRFGEVSDVEIITRKDDQGNPQKVFAYIN-IRVTEAD 64
Query: 66 LSKLFSTYNGCVWKGGRLRLERAKEHYLARLKREWAE 102
L K S N WKGG L+++ AKE +L RL +E E
Sbjct: 65 LKKCMSVLNKTKWKGGTLQIQLAKESFLHRLAQEREE 101
>gi|345785857|ref|XP_003432734.1| PREDICTED: LOW QUALITY PROTEIN: nucleolar protein 8 [Canis lupus
familiaris]
Length = 1140
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 55/98 (56%), Gaps = 7/98 (7%)
Query: 15 RIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG------RSFGYVDFFPSSHKSLSK 68
R++VGGLG VT DL FS G+V V+++ + + F Y++ + ++L+K
Sbjct: 9 RLFVGGLGRDVTSADLRDRFSRFGDVSEVEMITRRDDQGNPQKVFAYINIR-VAEENLNK 67
Query: 69 LFSTYNGCVWKGGRLRLERAKEHYLARLKREWAEDDAQ 106
S N WKGG L+++ AKE +L RL +E E A+
Sbjct: 68 CMSILNKTKWKGGTLQIQLAKESFLHRLAQEREEAKAK 105
>gi|397472717|ref|XP_003807883.1| PREDICTED: nucleolar protein 8 [Pan paniscus]
Length = 1169
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 7/94 (7%)
Query: 12 EQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG------RSFGYVDFFPSSHKS 65
E R+YVGGL + ++ DL FS GEV V+I+ K + F Y++ +
Sbjct: 6 ETKRLYVGGLSQDISVADLQNQFSRFGEVSDVEIITRKDDQGNPQKVFAYIN-ISVAEAD 64
Query: 66 LSKLFSTYNGCVWKGGRLRLERAKEHYLARLKRE 99
L K S N WKGG L+++ AKE +L RL +E
Sbjct: 65 LKKCMSVLNKTKWKGGTLQIQLAKESFLHRLAQE 98
>gi|444525594|gb|ELV14096.1| Isoleucyl-tRNA synthetase, cytoplasmic [Tupaia chinensis]
Length = 2636
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
Query: 12 EQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG------RSFGYVDFFPSSHKS 65
E R++VGGLG+ +++ DL FS GEV V+I+ K + F Y++ +
Sbjct: 300 ETKRLFVGGLGQAISETDLQNQFSRFGEVSDVEIITRKDDQGNPQKVFAYIN-IRVTEAD 358
Query: 66 LSKLFSTYNGCVWKGGRLRLERAKEHYLARLKRE 99
L K S N WKGG L+++ AKE +L RL +E
Sbjct: 359 LKKCMSVLNKTKWKGGTLQIQLAKESFLHRLAQE 392
>gi|194224991|ref|XP_001489737.2| PREDICTED: nucleolar protein 8-like [Equus caballus]
Length = 591
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 54/101 (53%), Gaps = 7/101 (6%)
Query: 12 EQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG------RSFGYVDFFPSSHKS 65
E R++VGGLG +++ DL FS GEV V+I+ K + F Y++ +
Sbjct: 6 ETKRLFVGGLGANISEADLRNQFSRFGEVSDVEIIARKDEQGNLQKVFAYIN-IRVAEAD 64
Query: 66 LSKLFSTYNGCVWKGGRLRLERAKEHYLARLKREWAEDDAQ 106
L K S N WKGG L+++ AKE +L RL +E E A+
Sbjct: 65 LKKCMSVLNKTKWKGGTLQIQLAKESFLHRLAQEREEAKAK 105
>gi|166157850|ref|NP_001107347.1| uncharacterized protein LOC100135171 [Xenopus (Silurana)
tropicalis]
gi|163916013|gb|AAI57175.1| LOC100135171 protein [Xenopus (Silurana) tropicalis]
gi|213625705|gb|AAI71162.1| hypothetical protein LOC100135171 [Xenopus (Silurana) tropicalis]
gi|213627796|gb|AAI71164.1| hypothetical protein LOC100135171 [Xenopus (Silurana) tropicalis]
Length = 185
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 7/98 (7%)
Query: 15 RIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG------RSFGYVDFFPSSHKSLSK 68
R+YVGG+G VTD +L F G+V V+I+ K ++F Y++ S L K
Sbjct: 7 RLYVGGIGPSVTDSELTDRFGKFGKVNDVEIITRKDEKGNPVKAFAYLN-ISISESDLKK 65
Query: 69 LFSTYNGCVWKGGRLRLERAKEHYLARLKREWAEDDAQ 106
S N WKGG L++E AKE +L RL +E E Q
Sbjct: 66 CMSALNKTKWKGGVLQIELAKESFLNRLAQERQEAKNQ 103
>gi|355695419|gb|AES00004.1| isoleucyl-tRNA synthetase [Mustela putorius furo]
Length = 632
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Query: 11 EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG------RSFGYVDFFPSSHK 64
+E R++VGGL + ++ DL FS G+V V+I+ K + F Y++ +
Sbjct: 5 KEVKRLFVGGLSQNISKADLQNQFSRFGDVSDVEIITRKDDQGNPQKVFAYINI-EVAEA 63
Query: 65 SLSKLFSTYNGCVWKGGRLRLERAKEHYLARLKREWAEDDAQ 106
L+K S N WKGG L+++ AKE +L RL +E E A+
Sbjct: 64 DLNKCMSVLNKTKWKGGTLQIQLAKESFLHRLAQEREEAKAK 105
>gi|47211596|emb|CAF89737.1| unnamed protein product [Tetraodon nigroviridis]
Length = 193
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 50/91 (54%), Gaps = 7/91 (7%)
Query: 15 RIYVGGLGEKVTDDDLAKVFSSLGEVKAVDI-VRTKG-----RSFGYVDFFPSSHKSLSK 68
R+YVGGLG VT DL F G V+ V++ +R ++FGY++ S +L K
Sbjct: 2 RLYVGGLGHTVTQKDLRDRFGKFGHVEDVELRIRKDAAGVPYKTFGYINI-SISDANLKK 60
Query: 69 LFSTYNGCVWKGGRLRLERAKEHYLARLKRE 99
+ N WKGG LR+E AKE +L RL E
Sbjct: 61 CLTVLNKSKWKGGTLRIEAAKESFLHRLAEE 91
>gi|328766500|gb|EGF76554.1| hypothetical protein BATDEDRAFT_92630 [Batrachochytrium
dendrobatidis JAM81]
Length = 146
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 15 RIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKGRSFGYVDFFP--SSHKSLSKLFST 72
R+++GGL V+ +DL FSS G V VDI + Y F ++ SL K S
Sbjct: 54 RLFIGGLPLDVSSEDLTARFSSFGTVSQVDIRSKPDQHQSYFAFLSLRTTVGSLKKCISI 113
Query: 73 YNGCVWKGGRLRLERAKEHYLARLKR 98
Y+G WKG LR+E +K+ YL+R+ R
Sbjct: 114 YHGTKWKGHALRIEESKQDYLSRITR 139
>gi|351711774|gb|EHB14693.1| Nucleolar protein 8 [Heterocephalus glaber]
Length = 843
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 12 EQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG------RSFGYVDFFPSSHKS 65
E R++VGGL + ++ DL FS GEV V+I+ K + F YV+
Sbjct: 6 ETKRLFVGGLSQAISKTDLQNQFSRFGEVSDVEIITRKDDQGNAQKVFAYVNI--RVEAD 63
Query: 66 LSKLFSTYNGCVWKGGRLRLERAKEHYLARL 96
L K S N WKGG L+++ AKE +L RL
Sbjct: 64 LKKCMSILNKTKWKGGTLQIQLAKESFLHRL 94
>gi|317418633|emb|CBN80671.1| Nucleolar protein 8 [Dicentrarchus labrax]
Length = 1057
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 63/127 (49%), Gaps = 21/127 (16%)
Query: 15 RIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG-------RSFGYVDFFPSSHKSLS 67
R+Y+GGL VT DL F G+V+ V++ RT+ ++FGY++ S L
Sbjct: 3 RLYIGGLSHTVTQKDLKDRFGKFGDVEDVEL-RTRRDEEGIPYKTFGYINI-NISDADLK 60
Query: 68 KLFSTYNGCVWKGGRLRLERAKEHYLARLKREWAEDDAQLVNPPVTDSVAPDNKDATRLD 127
K + N WKGG L++E AKE +L RL E E + Q + P + D
Sbjct: 61 KCLTVLNKSKWKGGTLQIETAKESFLHRLAEERQEAEEQRLQQPAAE------------D 108
Query: 128 TPKKLLD 134
T +K+LD
Sbjct: 109 TKQKMLD 115
>gi|403176437|ref|XP_003888898.1| hypothetical protein PGTG_22380 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375172249|gb|EHS64591.1| hypothetical protein PGTG_22380 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 573
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 14/144 (9%)
Query: 11 EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIV-----RTKGRSFGYVDFFPSSHKS 65
++ R+++GGLG VT DL K F++ G V VD V + +VD S+
Sbjct: 4 QQNFRLHIGGLGPSVTSSDLEKRFAAFGTVVKVDGVGKLDANGSPLKYAFVDIL-STDPQ 62
Query: 66 LSKLFSTYNGCVWKGGRLRLERAKEHYLARLKREWAEDDAQLVNPPVTDSVAPDNKDATR 125
+ + + +G +KGG LR+ A+ Y+AR++RE A N P+ V PD ++A R
Sbjct: 63 IKRCMNLLSGTTYKGGTLRIAPARPDYVARVEREKA-------NLPINTFVDPD-EEAIR 114
Query: 126 LDTPKKLLDKDKKLNIFFPRLRKV 149
+ K ++KL R R +
Sbjct: 115 VREEKAAQKLERKLAKLRARKRGI 138
>gi|427783595|gb|JAA57249.1| Hypothetical protein [Rhipicephalus pulchellus]
Length = 675
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 56/110 (50%), Gaps = 7/110 (6%)
Query: 15 RIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKGRS------FGYVDFFPSSHKSLSK 68
R++VG LG KVTD +L + F+ GEV+ V++ K S F Y+D ++L
Sbjct: 4 RLFVGNLGSKVTDSELREKFAKFGEVENVELHTKKDESGKPFKTFAYLD-LNIDQENLVN 62
Query: 69 LFSTYNGCVWKGGRLRLERAKEHYLARLKREWAEDDAQLVNPPVTDSVAP 118
YN WKG + ++ AKE Y+ R++RE AQ +DS P
Sbjct: 63 CIKAYNNAKWKGSVIVVQVAKESYIQRIQREAKAHSAQDTGNAPSDSAEP 112
>gi|449473797|ref|XP_002191110.2| PREDICTED: nucleolar protein 8 [Taeniopygia guttata]
Length = 1094
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 51/108 (47%), Gaps = 7/108 (6%)
Query: 15 RIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG------RSFGYVDFFPSSHKSLSK 68
R+YVGGLG ++ +L + F G V +I+ K ++F Y+ S L K
Sbjct: 7 RLYVGGLGHTISKAELEEKFGKFGRVLEAEIITRKDDQGNPTKTFAYISV-NISDADLRK 65
Query: 69 LFSTYNGCVWKGGRLRLERAKEHYLARLKREWAEDDAQLVNPPVTDSV 116
S N WKGG L++E AKE +L RL E E Q P D +
Sbjct: 66 CVSVLNKTKWKGGTLQIELAKESFLHRLATEREEAKLQKEKPERNDQM 113
>gi|393214157|gb|EJC99650.1| hypothetical protein FOMMEDRAFT_160076 [Fomitiporia mediterranea
MF3/22]
Length = 789
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 6/97 (6%)
Query: 8 AEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIV-----RTKGRSFGYVDFFPSS 62
+E+ R++V GL ++T DDL K FSS G VKA+D + + R F YV ++
Sbjct: 4 SEIVVTKRLHVSGLTPQITADDLKKRFSSFGSVKALDGLGKLDALGQNRPFAYVT-LETT 62
Query: 63 HKSLSKLFSTYNGCVWKGGRLRLERAKEHYLARLKRE 99
+K + +G WKG +LR+ AK + R+ +E
Sbjct: 63 KTQFAKCLNLLSGTTWKGAKLRIGEAKPDFKERIIKE 99
>gi|412990463|emb|CCO19781.1| hypothetical protein CHLNCDRAFT_137899 [Bathycoccus prasinos]
Length = 230
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 14 TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK-------GRSFGYVDFFPSSHKSL 66
R+Y+ GL + V++ DL ++F G++K V I R K R F + + SS ++
Sbjct: 4 VRLYISGLHQTVSEQDLKELFKPFGQIKNVQIARCKELNYQSFCRGFAHFEINFSSQEAQ 63
Query: 67 SKLFSTYNGCVWKGGRLRLERAKEHYLARLKREWAEDDAQL 107
+ YNGC WK R++LE A + R E E++ +
Sbjct: 64 IRCLFMYNGCKWKSRRIQLELAHPSFRDRRLAEIYENNQSM 104
>gi|331244892|ref|XP_003335085.1| hypothetical protein PGTG_16692 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 975
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 72/145 (49%), Gaps = 14/145 (9%)
Query: 11 EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIV-----RTKGRSFGYVDFFPSSHKS 65
++ R+++GGLG VT DL K F++ G V VD V + +VD S+
Sbjct: 406 QQNFRLHIGGLGPSVTSSDLEKRFAAFGTVVKVDGVGKLDANGSPLKYAFVDIL-STDPQ 464
Query: 66 LSKLFSTYNGCVWKGGRLRLERAKEHYLARLKREWAEDDAQLVNPPVTDSVAPDNKDATR 125
+ + + +G +KGG LR+ A+ Y+AR++RE A N P+ V PD ++A R
Sbjct: 465 IKRCMNLLSGTTYKGGTLRIAPARPDYVARVEREKA-------NLPINTFVDPD-EEAIR 516
Query: 126 LDTPKKLLDKDKKLNIFFPRLRKVK 150
+ K ++KL R R ++
Sbjct: 517 VREEKAAQKLERKLAKLRARKRGIE 541
>gi|336368606|gb|EGN96949.1| hypothetical protein SERLA73DRAFT_170295 [Serpula lacrymans var.
lacrymans S7.3]
gi|336381389|gb|EGO22541.1| hypothetical protein SERLADRAFT_473514 [Serpula lacrymans var.
lacrymans S7.9]
Length = 464
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 60/120 (50%), Gaps = 15/120 (12%)
Query: 15 RIYVGGLGEKVTDDDLAKVFSSLGEVKAVD-IVRTKG----RSFGYVDFFPSSHKSLSKL 69
R++V GL +T DD+++ S G VK++D + G R FGYV S+ L+K
Sbjct: 7 RLHVSGLTPAITQDDISRRLSGFGTVKSLDGFGKVDGVGMPRKFGYVTL-ESTKGQLAKC 65
Query: 70 FSTYNGCVWKGGRLRLERAKEHYLARLKREWAED---------DAQLVNPPVTDSVAPDN 120
+ +G WKG +LR+ AK Y RL+ E +E AQ V+ P V P+N
Sbjct: 66 LNVLSGSTWKGTKLRIGEAKPDYHERLEAERSESSGPPKKKRKSAQGVHAPDMSLVTPEN 125
>gi|351698679|gb|EHB01598.1| Nucleolar protein 8 [Heterocephalus glaber]
Length = 363
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 12 EQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG------RSFGYVDFFPSSHKS 65
E ++VGGL + ++ DL FS GEV V+I+ K + F YV+
Sbjct: 6 ETKHLFVGGLSQTISKTDLQNQFSRFGEVSDVEIITRKDDQGNAQKVFAYVNI-RVVEAD 64
Query: 66 LSKLFSTYNGCVWKGGRLRLERAKEHYLARL 96
L K S +N WKGG L+++ AKE +L RL
Sbjct: 65 LKKCMSIFNKTKWKGGTLQIQLAKESFLHRL 95
>gi|449548150|gb|EMD39117.1| hypothetical protein CERSUDRAFT_112807 [Ceriporiopsis
subvermispora B]
Length = 545
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Query: 15 RIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRT-----KGRSFGYVDFFPSSHKSLSKL 69
R++V GL +T D+++ SS G V++VD + R FGY+ + K L+K
Sbjct: 9 RVHVSGLTPAITAADISQRLSSFGTVRSVDGFGALDAVGQPRKFGYITLETTKSK-LAKC 67
Query: 70 FSTYNGCVWKGGRLRLERAKEHYLARLKRE 99
+ +G WKG +LRL AK + R+ RE
Sbjct: 68 MNILSGATWKGAKLRLGEAKPDFRERIARE 97
>gi|432959202|ref|XP_004086210.1| PREDICTED: nucleolar protein 8-like [Oryzias latipes]
Length = 995
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 9/92 (9%)
Query: 15 RIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG-------RSFGYVDFFPSSHKSLS 67
R++VGGL VT +L F G+V V++ RT+ ++FGY++ S L
Sbjct: 3 RLFVGGLSHTVTQKELKDRFGKFGDVVDVEL-RTRRDEEGVPYKTFGYINI-SISDADLK 60
Query: 68 KLFSTYNGCVWKGGRLRLERAKEHYLARLKRE 99
+ + N WKGG L++E AKE +L RL +E
Sbjct: 61 RCLTVLNKSKWKGGTLQIETAKESFLHRLAQE 92
>gi|156372840|ref|XP_001629243.1| predicted protein [Nematostella vectensis]
gi|156216239|gb|EDO37180.1| predicted protein [Nematostella vectensis]
Length = 206
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 56/96 (58%), Gaps = 10/96 (10%)
Query: 13 QTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG---------RSFGYVDFFPSSH 63
+TR+++GGL ++ + D+++ + G V +V+I R G ++F YVD +
Sbjct: 6 KTRLFIGGLYHEIKERDISERLKNFGSVSSVEIHRKDGFFFITGFPGKTFAYVDI-SAPE 64
Query: 64 KSLSKLFSTYNGCVWKGGRLRLERAKEHYLARLKRE 99
S+ K S WKG ++++++AKE +L+RL++E
Sbjct: 65 ASIRKCISVLTNTNWKGSQIKVQQAKESFLSRLEKE 100
>gi|363738650|ref|XP_414299.3| PREDICTED: nucleolar protein 8 [Gallus gallus]
Length = 152
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 55/120 (45%), Gaps = 13/120 (10%)
Query: 1 MEKKEAEAEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK------GRSFG 54
MEKK+ R+YVGGLG V+ +L + F G V V+I+ K ++F
Sbjct: 1 MEKKQV------SKRLYVGGLGHTVSKAELQERFGKFGRVLDVEIITRKDEQGNPTKTFA 54
Query: 55 YVDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERAKEHYLARLKREWAEDDAQLVNPPVTD 114
YV SS L K S N W G L++E AKE +L RL E E Q P D
Sbjct: 55 YVT-VSSSEADLRKCISILNKTKWGGKTLQIEFAKESFLHRLAVEREEAKLQKEKPRRND 113
>gi|395332001|gb|EJF64381.1| hypothetical protein DICSQDRAFT_81637 [Dichomitus squalens LYAD-421
SS1]
Length = 542
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 15 RIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRT-----KGRSFGYVDFFPSSHKSLSKL 69
RI++ GL +T DL+ +S G VKA+D + R F Y + K L++
Sbjct: 8 RIHISGLTPAITAKDLSDRLASFGTVKAIDGFGALDALGQPRKFAYATLETTKGK-LARC 66
Query: 70 FSTYNGCVWKGGRLRLERAKEHYLARLKREWAE 102
+ +G WKG +LRL AK Y R+ +E AE
Sbjct: 67 MNLLSGVTWKGAKLRLGEAKPDYRERIAQEQAE 99
>gi|170091482|ref|XP_001876963.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164648456|gb|EDR12699.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 576
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 15 RIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRT-----KGRSFGYVDFFPSSHKSLSKL 69
R+++ GL +T DD+++ S+ G VK VD + R FGY+ ++ K L+K
Sbjct: 13 RLHISGLTPAITADDISRRLSTFGSVKCVDGIGLLDGLGAPRKFGYITIETTAGK-LAKC 71
Query: 70 FSTYNGCVWKGGRLRLERAKEHYLARLKRE 99
+ +G WKG +LR AK + R+ E
Sbjct: 72 MNLLSGSTWKGAKLRFGEAKPDFAERIAAE 101
>gi|409040579|gb|EKM50066.1| hypothetical protein PHACADRAFT_264577 [Phanerochaete carnosa
HHB-10118-sp]
Length = 575
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 15 RIYVGGLGEKVTDDDLAKVFSSLGEVKAVDI-----VRTKGRSFGYVDFFPSSHKSLSKL 69
R++V GL +T DL++ S G VKA+D V + R FGYV + K L++
Sbjct: 9 RLHVSGLTPAITPADLSQKLGSFGTVKALDGFGVLDVLGRPRPFGYVTLETTKLK-LARC 67
Query: 70 FSTYNGCVWKGGRLRLERAKEHYLARLKREWAEDDAQ 106
+ +G WKG +LR+ A+ + RL +E D +
Sbjct: 68 MNLLSGVTWKGTKLRIGEARPDFRERLAKEREAQDGE 104
>gi|353227233|emb|CCA77750.1| hypothetical protein PIIN_02972 [Piriformospora indica DSM 11827]
Length = 460
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 15 RIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRT-----KGRSFGYVDFFPSSHKSLSKL 69
R++V GL ++ DL FS G V A+D + T + R F +V +S K SK
Sbjct: 21 RLHVSGLTPAISQADLTARFSIFGTVTAIDGLGTLDALGQPRKFAFVSLETTSDK-YSKC 79
Query: 70 FSTYNGCVWKGGRLRLERAKEHYLARLKRE 99
+ +G WKG RLR+ AK + AR RE
Sbjct: 80 LNVLSGSTWKGTRLRIGEAKPDFQARSGRE 109
>gi|19112572|ref|NP_595780.1| ribosome biogenesis protein Nop6 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|74698191|sp|Q9HFE6.1|YNW6_SCHPO RecName: Full=Uncharacterized RNA-binding protein P16F5.06
gi|10185169|emb|CAC08545.1| ribosome biogenesis protein Nop6 (predicted) [Schizosaccharomyces
pombe]
Length = 478
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 6/105 (5%)
Query: 10 VEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG-----RSFGYVDFFPSSHK 64
+E + RIYVGGL + DL FS G V ++I+ + F Y++F K
Sbjct: 1 MELEKRIYVGGLSSSIESSDLESRFSRFGSVSNLEIINKSTPVGTIQRFAYLNFRTDEDK 60
Query: 65 SLSKLFSTYNGCVWKGGRLRLERAKEHYLARLKREWAEDDAQLVN 109
K S + +KG +LR+E A+ +YL +L++E D Q N
Sbjct: 61 -WQKCKSYLSNATFKGSKLRIEEARPYYLVKLQQEKKIADLQSTN 104
>gi|391348741|ref|XP_003748602.1| PREDICTED: uncharacterized protein LOC100907195 [Metaseiulus
occidentalis]
Length = 624
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 15 RIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG----RSFGYVDFFPSSHKSLSKLF 70
R+Y+GGL E D D+ F+ G V +V+I + R F YVD ++ K L +
Sbjct: 200 RLYIGGLPESALDGDIKTKFAEFGRVGSVEIKCKENYGNKRFFAYVD-LDTTEKKLDQCI 258
Query: 71 STYNGCVWKGGRLRLERAKEHYLARLKREWAE 102
+ W+G RL+++ AKE +L + +E +E
Sbjct: 259 RECDNQTWQGARLKVQIAKESFLQKAHKEISE 290
>gi|403413895|emb|CCM00595.1| predicted protein [Fibroporia radiculosa]
Length = 533
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Query: 15 RIYVGGLGEKVTDDDLAKVFSSLGEVKAVD---IVRTKG--RSFGYVDFFPSSHKSLSKL 69
R++V GL +T DDL++ G VKA+D +V G R FGYV ++ K L +
Sbjct: 8 RLHVSGLTPAITPDDLSQRLGGFGIVKALDGFNLVDAVGQPRKFGYVT-LETTKKQLGRC 66
Query: 70 FSTYNGCVWKGGRLRLERAKEHY 92
+ +G WKG +LR+ AK +
Sbjct: 67 MNLLSGVTWKGAKLRIGEAKPDF 89
>gi|440803127|gb|ELR24039.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 384
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Query: 14 TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKGRSFGYVDFFPSSHKSLSKLFSTY 73
T I+VGGL + V + DL +VFS G + A+ ++ K +FG++ F S L
Sbjct: 174 TTIFVGGLADDVEERDLERVFSRFGPIDAIRLISNK--NFGFIKFRTPDACQASIL--GM 229
Query: 74 NGCVWKGGRLRLERAKEHYLARLKREWAE 102
NG + G R+R++RA+ +R W E
Sbjct: 230 NGEILNGSRVRVDRARVARPPWQRRPWGE 258
>gi|325179754|emb|CCA14157.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 727
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 49/114 (42%), Gaps = 23/114 (20%)
Query: 12 EQTRIYVGGLGEKVTDDDLAKVFSSLGE------------VKAVDIVR----------TK 49
+ RIY+GGL DL S E + + +++ T+
Sbjct: 20 QHIRIYIGGLSHGDNTLDLQTRIQSFVEQQRTGMHKDCALILPIQVMQEKNPSSGSKTTR 79
Query: 50 GRSFGYVDFFPSSHKSL-SKLFSTYNGCVWKGGRLRLERAKEHYLARLKREWAE 102
R FGY DF S+ S L +N W+G L+ E AK HY+ +L++EW E
Sbjct: 80 LRGFGYADFKGEDVSSVVSDLIKVFNKTKWRGSVLKFETAKPHYIEKLRKEWME 133
>gi|392590824|gb|EIW80152.1| hypothetical protein CONPUDRAFT_165749 [Coniophora puteana
RWD-64-598 SS2]
Length = 563
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Query: 16 IYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG-----RSFGYVDFFPSSHKSLSKLF 70
+++ G+ +T +DL+++ S G VK+VD K R F Y+ ++ L+K
Sbjct: 8 LHISGISSNITANDLSRLISGYGAVKSVDGFGAKNGLGEPRPFAYITL-ETTKGQLAKCL 66
Query: 71 STYNGCVWKGGRLRLERAKEHYLARLKRE 99
+ +G +WKG +LR+ AK + R+ +E
Sbjct: 67 NVLSGSIWKGTKLRVGEAKPDFRERISQE 95
>gi|443917171|gb|ELU37965.1| RNA recognition motif domain-containing protein [Rhizoctonia
solani AG-1 IA]
Length = 542
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Query: 12 EQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRT-----KGRSFGYVDFFPSSHKSL 66
+ TR+++ GL ++ DL + F++ GEVK VD V + R F Y+ ++ L
Sbjct: 2 QTTRLHISGLTPSISASDLKQRFTTFGEVKDVDGVGKLDGVGRPRKFAYLT-LETTQPKL 60
Query: 67 SKLFSTYNGCVWKGGRLRLERAKEHYLAR 95
++ + +G WKG +LR+ AK Y +R
Sbjct: 61 ARCMNLLSGSTWKGAKLRIGEAKPDYKSR 89
>gi|388583153|gb|EIM23456.1| hypothetical protein WALSEDRAFT_62819 [Wallemia sebi CBS 633.66]
Length = 393
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 9 EVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG----RSFGYVDFFPSSHK 64
E E R+++ GL +T DL FS G V +V+ G R + +++F SS
Sbjct: 3 EGEITKRLHIAGLTPSITLKDLENRFSRFGSVLSVEECGRDGNGDPRKYCFMNF-KSSQA 61
Query: 65 SLSKLFSTYNGCVWKGGRLRLERAKEHYLARL 96
L+KL T++ WK +LR+ AK +Y ARL
Sbjct: 62 QLNKLMQTFSNSRWKDAKLRISEAKPNYTARL 93
>gi|347965607|ref|XP_321890.5| AGAP001261-PA [Anopheles gambiae str. PEST]
gi|333470433|gb|EAA01757.5| AGAP001261-PA [Anopheles gambiae str. PEST]
Length = 620
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 63/118 (53%), Gaps = 17/118 (14%)
Query: 15 RIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKGR-------SFGYVDFFPSSHKSLS 67
R+++G + ++ +L++ FS+ G V+A++I +TK +FG+V H +
Sbjct: 7 RLFIGNIPAGTSEQELSQEFSAYGNVEAIEI-KTKTNPLNDSVDTFGFVTLQTEDH-IVP 64
Query: 68 KLFSTYNGCVWKGGRLRLERAKEHYLARLKREWAEDDAQ-----LVNP---PVTDSVA 117
+ + +KG L + RAKE +L +LKRE E +AQ L++P PV + VA
Sbjct: 65 QCIKEFKQQQYKGAYLNVSRAKESFLEKLKREREEAEAQKKNSSLLDPYTKPVEEKVA 122
>gi|392564976|gb|EIW58153.1| hypothetical protein TRAVEDRAFT_20258 [Trametes versicolor
FP-101664 SS1]
Length = 541
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 15 RIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIV-----RTKGRSFGYVDFFPSSHKSLSKL 69
RI++ GL +T DL+ S G VKA+D + R F Y + K L++
Sbjct: 8 RIHISGLTPAITSKDLSDRLGSFGTVKAMDGFGGVDNLGQPRKFAYATLETTKGK-LARC 66
Query: 70 FSTYNGCVWKGGRLRLERAKEHYLARLKRE 99
+ +G WKG +LRL AK + R+KR+
Sbjct: 67 MNLLSGVTWKGAKLRLGEAKADFRERVKRD 96
>gi|443723570|gb|ELU11929.1| hypothetical protein CAPTEDRAFT_228664 [Capitella teleta]
Length = 815
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 61/135 (45%), Gaps = 20/135 (14%)
Query: 15 RIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKGRSFGYVDFFPSSH-------KSLS 67
R+++ GL +TD DL + F + G++ V + +D S+H K L
Sbjct: 5 RLFISGLAPSITDKDLEQRFKTFGKISDVKLHSKTDFEGKPMD--SSAHLTLHCDEKVLK 62
Query: 68 KLFSTYNGCVWKGGRLRLERAKEHYLARLKREWAED--------DAQLVNPPVTDSVAPD 119
K +NG WKG + +ERAKE + R RE E +A+ ++P ++AP
Sbjct: 63 KCLGLFNGAKWKGKVMTIERAKESFFQRANREREEMIDAEAPSVEAEAIDPA---AIAPI 119
Query: 120 NKDATRLDTPKKLLD 134
N T K+ LD
Sbjct: 120 NIKMKEPRTQKRKLD 134
>gi|384491279|gb|EIE82475.1| hypothetical protein RO3G_07180 [Rhizopus delemar RA 99-880]
Length = 607
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 8/86 (9%)
Query: 15 RIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR-----TKGRSFGYVDFFPSSHKSLSKL 69
RIY+GGL +T+D + + FS G + + + R +G + +D P K ++
Sbjct: 19 RIYLGGLHSSITEDQIKERFSRFGTISHIHVARDSENLCRGFAHMNIDTIP---KKWAQC 75
Query: 70 FSTYNGCVWKGGRLRLERAKEHYLAR 95
S Y G WKG +++E AK Y R
Sbjct: 76 LSVYKGSKWKGQEIKIEEAKMDYKER 101
>gi|357628670|gb|EHJ77925.1| 50kDa lectin [Danaus plexippus]
Length = 583
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 52/93 (55%), Gaps = 10/93 (10%)
Query: 14 TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDI-----VRTKGRSFGYVDFFPSSH--KSL 66
TR++V L E + ++ L +FSS GEV D+ V ++F +V S++ +S
Sbjct: 5 TRLFVSNLPENIDNNSLKDIFSSYGEVTNFDLKSKPGVENDKKTFAFVTISASNYNVESC 64
Query: 67 SKLFSTYNGCVWKGGRLRLERAKEHYLARLKRE 99
K FS + ++G +L + RA+E +L RL+RE
Sbjct: 65 IKYFSDND---FQGHKLYVTRARESFLERLQRE 94
>gi|393234189|gb|EJD41754.1| hypothetical protein AURDEDRAFT_186366 [Auricularia delicata
TFB-10046 SS5]
Length = 526
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 6/103 (5%)
Query: 14 TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK-----GRSFGYVDFFPSSHKSLSK 68
TR+++ GL +++ DL SS G V+ +D K R FGY + +++
Sbjct: 9 TRLHISGLTPAISEKDLQAKLSSFGTVRGLDGFGAKDGNGDPRKFGYATLE-APPAQVTR 67
Query: 69 LFSTYNGCVWKGGRLRLERAKEHYLARLKREWAEDDAQLVNPP 111
+ +G WKG RLR+ AK + R +E ++ + + PP
Sbjct: 68 CVTALSGTTWKGARLRIAPAKPDFSQRWLKETEANEQESLEPP 110
>gi|310798668|gb|EFQ33561.1| 4 family polyadenylate binding protein [Glomerella graminicola
M1.001]
Length = 768
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 57/99 (57%), Gaps = 9/99 (9%)
Query: 1 MEKKEAEAEVEEQ----TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSF 53
+ KK+ +++ EE T IYV + +VTDD+ +F++ G+V + + R K R F
Sbjct: 228 IPKKDRQSKFEEMKANFTNIYVKNIANEVTDDEFRDLFTAFGDVTSSSLARDQEGKSRGF 287
Query: 54 GYVDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERAKEHY 92
G+V+F ++H++ +K NG ++G L + RA++ +
Sbjct: 288 GFVNF--TTHEAAAKAVDDLNGKDFRGQDLYVGRAQKKH 324
>gi|213409856|ref|XP_002175698.1| ribosome biogenesis protein Nop6 [Schizosaccharomyces japonicus
yFS275]
gi|212003745|gb|EEB09405.1| ribosome biogenesis protein Nop6 [Schizosaccharomyces japonicus
yFS275]
Length = 489
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 15 RIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG-----RSFGYVDFFPSSHKSLSKL 69
R+++GGL E + ++DL G+ +IV K F YVD S+ + K
Sbjct: 9 RVFIGGLSETIREEDLVPRLQRFGQTSNFEIVEKKQPVGTVHRFAYVD-LESTDANWVKC 67
Query: 70 FSTYNGCVWKGGRLRLERAKEHYLARLK 97
+ V++G RL+LE AK Y RLK
Sbjct: 68 RTQLTNVVFRGSRLKLEEAKSKYTERLK 95
>gi|330822065|ref|XP_003291621.1| hypothetical protein DICPUDRAFT_82285 [Dictyostelium purpureum]
gi|325078186|gb|EGC31851.1| hypothetical protein DICPUDRAFT_82285 [Dictyostelium purpureum]
Length = 922
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 56/104 (53%), Gaps = 19/104 (18%)
Query: 3 KKEAEAEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAV---------DIVRTKGRSF 53
+K E++ + R+YVGGL + + +++ +F S VK + DIV + + F
Sbjct: 72 RKLEESKYPQTLRLYVGGLNQNIKLEEINYLFVSF--VKDIKVESLEFINDIVSNQYKGF 129
Query: 54 GYVD-FFPS---SHKSLSKLFSTYNGCVWKGGRLRLERAKEHYL 93
Y++ +FPS HK++S L N WKG L +++AK +YL
Sbjct: 130 AYINCYFPSLDSFHKAVSNL----NKTKWKGSNLIIQKAKPNYL 169
>gi|321454568|gb|EFX65733.1| hypothetical protein DAPPUDRAFT_204255 [Daphnia pulex]
Length = 472
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Query: 13 QTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKGRSFGYVDFFPSSHKSLSKLFST 72
++R+YVG LG + + DL + FS+ GE+ V + + KG +F +D+ +S K+ +L
Sbjct: 100 RSRLYVGNLGNDIVEQDLKEYFSAYGEIAEVFLNKEKGFAFVRLDYRSNSEKAKREL--- 156
Query: 73 YNGCVWKGGRLRLERAKEHYLARLK 97
+G V KG LR+ A R+K
Sbjct: 157 -DGKVLKGRTLRVRSAPHSAAVRVK 180
>gi|358386241|gb|EHK23837.1| hypothetical protein TRIVIDRAFT_169516 [Trichoderma virens Gv29-8]
Length = 747
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 55/99 (55%), Gaps = 9/99 (9%)
Query: 1 MEKKEAEAEVEEQ----TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSF 53
+ KK+ +++ EE T +YV +G VTDD+ ++F G+V + + R K R F
Sbjct: 223 IPKKDRQSKFEEMKANFTNVYVKNIGPDVTDDEFRELFEKFGDVTSSSLARDQEGKPRGF 282
Query: 54 GYVDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERAKEHY 92
G+V+F ++H++ K NG ++G L + RA++ +
Sbjct: 283 GFVNF--TTHEAAFKAVEDLNGKDFRGQELYVGRAQKKH 319
>gi|378732913|gb|EHY59372.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 779
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 61/109 (55%), Gaps = 11/109 (10%)
Query: 1 MEKKEAEAEVEEQ----TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSF 53
+ K++ ++++EE T +Y+ + E V+D++ K+F GEV + I R K R F
Sbjct: 225 IAKRDRQSKLEEMKANFTNVYIKNIDESVSDEEFTKLFEPYGEVVSATITRDENGKSRGF 284
Query: 54 GYVDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERAKEHY--LARLKREW 100
G+V+F +SH+S +K N + G +L + RA++ + L+R++
Sbjct: 285 GFVNF--ASHESAAKAVEELNDKEFHGKKLYVGRAQKKHEREEELRRQY 331
>gi|168027694|ref|XP_001766364.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682273|gb|EDQ68692.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 405
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 16 IYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKGRSFGYVDFFPSSHKSLSKLFSTYNG 75
+YVG + +VT+ LA+VF+SLG ++ ++R S+G+VD+F H+S ST NG
Sbjct: 23 VYVGNIHSRVTEGLLAEVFASLGPLEGCKLIRKDKSSYGFVDYF--DHRSAVAALSTLNG 80
>gi|297846966|ref|XP_002891364.1| ATRBP47C [Arabidopsis lyrata subsp. lyrata]
gi|297337206|gb|EFH67623.1| ATRBP47C [Arabidopsis lyrata subsp. lyrata]
Length = 443
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 8/78 (10%)
Query: 14 TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKGRSFGYVDFF--PSSHKSLSKLFS 71
T I+VGGL VTDDDL + FS GE+ +V I G+ G+V F PS+ ++L KL
Sbjct: 312 TTIFVGGLDSSVTDDDLRQPFSEFGEIVSVKI--PVGKGCGFVQFVNRPSAEEALEKL-- 367
Query: 72 TYNGCVWKGGRLRLERAK 89
NG V +RL +
Sbjct: 368 --NGTVIGKQTVRLSWGR 383
>gi|112983734|ref|NP_001037313.1| 50kDa lectin [Bombyx mori]
gi|500858|dbj|BAA03210.1| 50kDa lectin [Bombyx mori]
Length = 433
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 50/93 (53%), Gaps = 5/93 (5%)
Query: 14 TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDI----VRTKGRSFGYVDFFPSSHKSLSKL 69
TR++V + E ++D+L FS G+V ++D+ + ++F ++ S++ +
Sbjct: 5 TRLFVSNIPENTSEDELRCAFSKFGKVNSLDLKCKSSIEENKTFAFITLSASNY-DIESC 63
Query: 70 FSTYNGCVWKGGRLRLERAKEHYLARLKREWAE 102
+ +KG RL + RA+E +L RL+RE E
Sbjct: 64 IKRFTSEEFKGNRLYVTRARESFLERLQRERNE 96
>gi|340939192|gb|EGS19814.1| hypothetical protein CTHT_0042990 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 777
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 55/99 (55%), Gaps = 9/99 (9%)
Query: 1 MEKKEAEAEVEEQ----TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSF 53
+ KK+ +++ EE T +Y+ + +VT+++ + FS GE+ + + R K R F
Sbjct: 232 IPKKDRQSKFEEMKANYTNVYIKNINLEVTEEEFREFFSKWGEITSSTLARDAEGKPRGF 291
Query: 54 GYVDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERAKEHY 92
G+V++ S+H S +K NG W+G L + RA++ +
Sbjct: 292 GFVNY--STHASAAKCVEEMNGKEWRGQELYVGRAQKKH 328
>gi|406602053|emb|CCH46373.1| Polyadenylate-binding protein, cytoplasmic and nuclear
[Wickerhamomyces ciferrii]
Length = 694
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 9/86 (10%)
Query: 16 IYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK-GRS--FGYVDFFPSSHKSLSKLFST 72
IYV GLG ++T +DL K+F GE+ + IV + GRS +G++++ S S S
Sbjct: 131 IYVRGLGPEITTEDLFKIFEPFGEITSSKIVNDEFGRSKGYGFINY--SDGSSADDAISK 188
Query: 73 YNGCVWKGGRLRLERAKEHYLARLKR 98
NG + G +L L H++A+ +R
Sbjct: 189 LNGLLVNGSKLYL----NHHIAKKER 210
>gi|402223844|gb|EJU03908.1| hypothetical protein DACRYDRAFT_115208 [Dacryopinax sp. DJM-731
SS1]
Length = 555
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Query: 14 TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRT-----KGRSFGYVDFFPSSHKSLSK 68
TR+++ GL +T DL FSS G V A+D + + R F Y+ S+ L +
Sbjct: 8 TRLHIAGLTPSITASDLQARFSSFGTVLALDGLHLPDGLGEPRKFAYLTL-QSTPVKLKR 66
Query: 69 LFSTYNGCVWKGGRLRLERAKEHYLARLKRE 99
+ +G ++KG +LR+ AK Y AR ++E
Sbjct: 67 CMNVLSGTMYKGAKLRIGEAKMDYTARWEKE 97
>gi|308162934|gb|EFO65301.1| Hypothetical protein GLP15_4320 [Giardia lamblia P15]
Length = 164
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 12/111 (10%)
Query: 16 IYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKGRSFGYVDFFP--------SSHKSLS 67
+YVGGL + VT++ L ++FS ++K V+I + + F ++ P L+
Sbjct: 4 VYVGGLSKDVTEESLRELFSRRVQIKGVEINKKHVKIFNDIERAPVFAFLDCVCDEDQLA 63
Query: 68 KLFSTYNGCVWKGGRLRLERAKE---HYLARLKREWAEDDAQLVNPPVTDS 115
K+ + YN C W G LR++ AK+ Y+ + E + D Q P T+S
Sbjct: 64 KVLA-YNKCYWNGTYLRVQVAKKGPYMYIPKASEEMLQTDIQRFPEPHTES 113
>gi|336276750|ref|XP_003353128.1| hypothetical protein SMAC_03445 [Sordaria macrospora k-hell]
gi|380092612|emb|CCC09889.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 754
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 56/99 (56%), Gaps = 9/99 (9%)
Query: 1 MEKKEAEAEVEEQ----TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSF 53
+ KK+ +++ EE T +YV + +VTDD+ ++F GEV + + R K R F
Sbjct: 225 IPKKDRQSKFEEMKANFTNVYVKNINHEVTDDEFRELFEKFGEVTSSSLARDQEGKTRGF 284
Query: 54 GYVDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERAKEHY 92
G+V+F ++H++ +K NG ++G L + RA++ +
Sbjct: 285 GFVNF--TTHEAAAKAVDDLNGKDFRGQDLYVGRAQKKH 321
>gi|171681916|ref|XP_001905901.1| hypothetical protein [Podospora anserina S mat+]
gi|170940917|emb|CAP66567.1| unnamed protein product [Podospora anserina S mat+]
Length = 804
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 58/99 (58%), Gaps = 9/99 (9%)
Query: 1 MEKKEAEAEVEEQ----TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRT---KGRSF 53
+ KK+ +++ EE T +YV + +VTD++ ++F+ G+V + + R+ K R F
Sbjct: 278 IPKKDRQSKFEEMKANFTNVYVKNIPAEVTDEEFRELFAKYGDVTSSSLARSDEGKSRGF 337
Query: 54 GYVDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERAKEHY 92
G+V+F ++H++ SK NG ++G L + RA++ +
Sbjct: 338 GFVNF--TTHEAASKAVEELNGKDFRGQELYVGRAQKKH 374
>gi|367030019|ref|XP_003664293.1| hypothetical protein MYCTH_2306966 [Myceliophthora thermophila ATCC
42464]
gi|347011563|gb|AEO59048.1| hypothetical protein MYCTH_2306966 [Myceliophthora thermophila ATCC
42464]
Length = 787
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 56/99 (56%), Gaps = 9/99 (9%)
Query: 1 MEKKEAEAEVEEQ----TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSF 53
+ KK+ +++ EE T +YV + +VT+++ ++FS GEV + + R K R F
Sbjct: 228 IPKKDRQSKFEEMKANYTNVYVKNINLEVTEEEFRELFSKYGEVTSSTLARDQEGKSRGF 287
Query: 54 GYVDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERAKEHY 92
G+V+F S+H S +K NG ++G L + RA++ +
Sbjct: 288 GFVNF--STHDSAAKAVEELNGKEFRGQELYVGRAQKKH 324
>gi|403337449|gb|EJY67940.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 1259
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 9/87 (10%)
Query: 6 AEAEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIV-------RTKGRSFGYVDF 58
A+ +++ T IYVG L +VT++ LAKVF GE+++V I+ R K R+ G++ F
Sbjct: 123 ADYLMQQVTNIYVGNLSSEVTEETLAKVFCKFGEIESVKIMLPRNEEDRKKKRNCGFIKF 182
Query: 59 FPSSHKSLSKLFSTYNGCVWKGGRLRL 85
+ L+K N + G +R+
Sbjct: 183 YKYESAFLAK--EAMNEHLLDGMSMRI 207
>gi|380494250|emb|CCF33289.1| Poly(A) RNA binding protein [Colletotrichum higginsianum]
Length = 677
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 56/99 (56%), Gaps = 9/99 (9%)
Query: 1 MEKKEAEAEVEEQ----TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSF 53
+ KK+ +++ EE T IY+ + +VTDD+ +F+ G+V + + R K R F
Sbjct: 228 IPKKDRQSKFEEMKANFTNIYIKNISGEVTDDEFRDLFTPFGDVTSSSLARDQEGKSRGF 287
Query: 54 GYVDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERAKEHY 92
G+V+F ++H++ +K NG ++G L + RA++ +
Sbjct: 288 GFVNF--TTHEAAAKAVDDLNGKDFRGQDLYVGRAQKKH 324
>gi|328865543|gb|EGG13929.1| hypothetical protein DFA_11690 [Dictyostelium fasciculatum]
Length = 831
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 54/100 (54%), Gaps = 10/100 (10%)
Query: 14 TRIYVGGLGEKVTDDDLAKVFSSL---GEVKAVDIVR--TKG--RSFGYVDFFPSSHKSL 66
R+++GGL V+ +DL +F S EV+ ++ V KG + F Y + SL
Sbjct: 153 VRLFLGGLSLTVSQNDLDSLFKSSVKDCEVRNLEFVHDAIKGHYKGFAYSTVYFVDKPSL 212
Query: 67 SKLFSTYNGCVWKGGRLRLERAKEHYLARLKR---EWAED 103
K+F+ N WKG + +++A+E+Y +LK+ E A+D
Sbjct: 213 LKIFNDLNQTKWKGSMITIQKARENYQDKLKKIHEEIAQD 252
>gi|365985359|ref|XP_003669512.1| hypothetical protein NDAI_0C06100 [Naumovozyma dairenensis CBS 421]
gi|343768280|emb|CCD24269.1| hypothetical protein NDAI_0C06100 [Naumovozyma dairenensis CBS 421]
Length = 585
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 61/109 (55%), Gaps = 11/109 (10%)
Query: 1 MEKKEAEAEVEEQ----TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRT---KGRSF 53
+ +KE ++++EE T IYV + + TD++ ++FS G+V + + +T K + F
Sbjct: 204 LSRKERDSQLEESKANFTNIYVKNINLETTDEEFTELFSKYGKVLSAALEKTEDGKLKGF 263
Query: 54 GYVDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERAKEHY--LARLKREW 100
G+VDF +H+ +K NG +K L + RA++ Y + LK+++
Sbjct: 264 GFVDF--ENHEDAAKAVEELNGSQFKDQELFVSRAQKKYERMQELKKQY 310
>gi|326523691|dbj|BAJ93016.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 244
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Query: 10 VEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG----RSFGYVDFFPSSHKS 65
V+ Q ++YVG L +KVT + L FS GEV + + R G + +G+V F SS +
Sbjct: 164 VDSQYKVYVGNLAKKVTTEVLKNFFSEKGEVLSATVSRIPGTPKSKGYGFVTF--SSEEE 221
Query: 66 LSKLFSTYNGCVWKGGRLRLERA 88
+ ST+N +G +R+ RA
Sbjct: 222 VEAAVSTFNNTELEGQTIRVNRA 244
>gi|20159727|gb|AAM11915.1| plastid-specific ribosomal protein 2 precursor [Deschampsia
antarctica]
Length = 114
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 5 EAE-AEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG----RSFGYVDFF 59
EAE A V+ Q ++YVG L + VT + L FS GEV + + R G + FG+V F
Sbjct: 28 EAEPAFVDSQYKVYVGNLAKTVTMEVLKNFFSEKGEVLSATVSRVPGTPKSKGFGFVTF- 86
Query: 60 PSSHKSLSKLFSTYNGCVWKGGRLRLERA 88
SS + + ST+N +G +R+ RA
Sbjct: 87 -SSDEEVEAAVSTFNNTELEGQAIRVNRA 114
>gi|440295256|gb|ELP88169.1| hypothetical protein EIN_223920 [Entamoeba invadens IP1]
Length = 177
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 15 RIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIV--RTKGRSFGYVDFFPSSHKSLSKLFST 72
R+++GG+ +T L + F G V++++ K F Y++F + +L + S+
Sbjct: 39 RLFIGGIDRSITQQQLKEQFKRYGTVESIEFKDKEEKDTLFAYMEFNAKNDLALHQCLSS 98
Query: 73 YNGCVWKGGRLRLERAKEHYLARLKREWAED 103
N WKG +L ++ A++ + + + W E+
Sbjct: 99 LNMLNWKGHKLTVQYARDDIMVQYREMWKEN 129
>gi|126654754|ref|ZP_01726288.1| RNA-binding region RNP-1 [Cyanothece sp. CCY0110]
gi|126623489|gb|EAZ94193.1| RNA-binding region RNP-1 [Cyanothece sp. CCY0110]
Length = 97
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 16 IYVGGLGEKVTDDDLAKVFSSLGEVKAVDIV--RTKGRSFGYVDFFPSSHKSLSKLFSTY 73
IYVG L VT +DL++VF+ G+VK V I R GR G+ +S K ST
Sbjct: 3 IYVGNLSYDVTKEDLSEVFTDYGQVKRVHIPTDRDTGRMRGFAFVEMTSDDQEEKAISTL 62
Query: 74 NGCVWKGGRLRLERAKEH 91
+G W G L++ +AKE
Sbjct: 63 DGAEWMGRTLKVNKAKER 80
>gi|354485887|ref|XP_003505113.1| PREDICTED: polyadenylate-binding protein 4-like [Cricetulus
griseus]
Length = 685
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE+V DD+L ++FS G+ +V ++R K + FG+
Sbjct: 198 RKEREAELGAKAKEFTNVYIKNFGEEVDDDNLKELFSQFGKTLSVKVMRDPSGKSKGFGF 257
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 258 VSY--EKHEDANKAVEEMNGKEMSGKAIFVGRAQKKVERQAELKRKF 302
>gi|440796160|gb|ELR17269.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 1122
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 14 TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR--TKGRSFGYVDFFPSSHKSLSKLFS 71
+ ++VGGLG+ V + DL F+++GE+ + +++ T G S GY +S K
Sbjct: 401 SEVFVGGLGKDVNEADLYSAFANVGEIFEIRLMKDATTGESKGYAFVRFTSPKFAKLAVQ 460
Query: 72 TYNGCVWKGGRLRLERAKEH---YLARLKREWAEDD 104
+G V KG ++ + + ++ +L L ++W +DD
Sbjct: 461 QVDGAVLKGRKVGVVHSNDNQTLFLGHLDKDWRQDD 496
>gi|172038249|ref|YP_001804750.1| RNA-binding protein [Cyanothece sp. ATCC 51142]
gi|354554398|ref|ZP_08973703.1| RNP-1 like RNA-binding protein [Cyanothece sp. ATCC 51472]
gi|171699703|gb|ACB52684.1| RNA-binding protein [Cyanothece sp. ATCC 51142]
gi|353554077|gb|EHC23468.1| RNP-1 like RNA-binding protein [Cyanothece sp. ATCC 51472]
Length = 97
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 16 IYVGGLGEKVTDDDLAKVFSSLGEVKAVDIV--RTKGRSFGYVDFFPSSHKSLSKLFSTY 73
IYVG L VT +DL++VF+ GEVK V I R GR G+ +S + ST
Sbjct: 3 IYVGNLSYDVTKEDLSEVFTDYGEVKRVHIPTDRDTGRMRGFAFVEMNSDDQEEQAISTL 62
Query: 74 NGCVWKGGRLRLERAKE 90
+G W G L++ +AKE
Sbjct: 63 DGAEWMGRTLKVNKAKE 79
>gi|432900542|ref|XP_004076708.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Oryzias
latipes]
Length = 255
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 2 EKKEAEAEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK--GRSFGYVDFF 59
EK +E + I+VGG ++T+ DL VFS GE+ V++VR K G+S G+
Sbjct: 24 EKVSWHSEYRDSAWIFVGGFPYELTEGDLLCVFSQYGEIVNVNLVRDKKTGKSKGFCFIC 83
Query: 60 PSSHKSLSKLFSTYNGCVWKGGRLRLERAKEH 91
+S +NG KG +R++ K +
Sbjct: 84 YEDQRSTILAVDNFNGIKIKGRTIRVDHVKNY 115
>gi|367040559|ref|XP_003650660.1| hypothetical protein THITE_2110364 [Thielavia terrestris NRRL 8126]
gi|346997921|gb|AEO64324.1| hypothetical protein THITE_2110364 [Thielavia terrestris NRRL 8126]
Length = 777
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 56/99 (56%), Gaps = 9/99 (9%)
Query: 1 MEKKEAEAEVEEQ----TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSF 53
+ KK+ +++ EE T +YV + +VT+++ ++F+ GEV + + R K R F
Sbjct: 228 IPKKDRQSKFEEMKANFTNVYVKNINHEVTEEEFRELFAKYGEVTSSSLARDNEGKSRGF 287
Query: 54 GYVDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERAKEHY 92
G+V+F ++H S +K NG ++G L + RA++ +
Sbjct: 288 GFVNF--TTHASAAKAVEELNGKEFRGQELYVGRAQKKH 324
>gi|66805835|ref|XP_636639.1| hypothetical protein DDB_G0288611 [Dictyostelium discoideum AX4]
gi|60465030|gb|EAL63137.1| hypothetical protein DDB_G0288611 [Dictyostelium discoideum AX4]
Length = 524
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
Query: 14 TRIYVGGLGEKVTDDDLAKVFSS------LGEVKAV-DIVRTKGRSFGYVDFFPSSHKSL 66
R+YVGGL + ++ +FSS L +++ + DI + + F Y++ + + SL
Sbjct: 89 IRLYVGGLNPTIQFSEIDNLFSSMIKDTKLEKLEFINDISSNQYKGFAYLNVYFPTIDSL 148
Query: 67 SKLFSTYNGCVWKGGRLRLERAKEHYLARL 96
+K S N WKG L++++AK +YL +L
Sbjct: 149 NKALSVLNKTKWKGSVLKIQKAKPNYLEKL 178
>gi|429859146|gb|ELA33937.1| polyadenylate-binding protein [Colletotrichum gloeosporioides Nara
gc5]
Length = 688
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 56/99 (56%), Gaps = 9/99 (9%)
Query: 1 MEKKEAEAEVEEQ----TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSF 53
+ KK+ +++ EE T +YV + +VTDD+ +F++ G+V + + R K R F
Sbjct: 198 IPKKDRQSKFEEMKANFTNVYVKNIANEVTDDEFRDLFAAFGDVTSSSLARDQEGKSRGF 257
Query: 54 GYVDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERAKEHY 92
G+V+F ++H++ +K N ++G L + RA++ +
Sbjct: 258 GFVNF--TTHEAAAKAVEDLNNKDFRGQDLYVGRAQKKH 294
>gi|340517112|gb|EGR47358.1| polyadenylate-binding protein [Trichoderma reesei QM6a]
Length = 745
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 54/99 (54%), Gaps = 9/99 (9%)
Query: 1 MEKKEAEAEVEEQ----TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSF 53
+ KK+ +++ EE T +YV + VTD+D ++F G+V + + R K R F
Sbjct: 223 IPKKDRQSKFEEMKANFTNVYVKNIAPDVTDEDFRQLFEKFGDVTSSSLARDQEGKTRGF 282
Query: 54 GYVDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERAKEHY 92
G+V+F ++H++ K NG ++G L + RA++ +
Sbjct: 283 GFVNF--TTHEAAFKAVEELNGKDFRGQDLYVGRAQKKH 319
>gi|342879464|gb|EGU80711.1| hypothetical protein FOXB_08751 [Fusarium oxysporum Fo5176]
Length = 794
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 9/99 (9%)
Query: 1 MEKKEAEAEVEEQ----TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSF 53
+ KK+ +++ EE T +YV + VT+DD ++F G+V + + R K R F
Sbjct: 223 IPKKDRQSKFEEMKANFTNVYVKNIAPDVTEDDFRELFEKFGDVTSSSLARDQEGKSRGF 282
Query: 54 GYVDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERAKEHY 92
G+V+F ++H+S SK NG + G L + RA++ +
Sbjct: 283 GFVNF--TTHESASKAVDDLNGKDFHGQDLYVGRAQKKH 319
>gi|426199071|gb|EKV48996.1| hypothetical protein AGABI2DRAFT_116037 [Agaricus bisporus var.
bisporus H97]
Length = 511
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Query: 15 RIYVGGLGEKVTDDDLAKVFSSLGEVKAVD---IVRTKG--RSFGYVDFFPSSHKSLSKL 69
R++V GL ++ DL++ S+ G +K++D +V G R F Y + K ++K
Sbjct: 11 RLHVSGLTPSISQQDLSQRLSTFGTLKSLDGLGLVDAVGNPRKFAYATLEGAPAK-VTKC 69
Query: 70 FSTYNGCVWKGGRLRLERAKEHYLARLKRE 99
+ +G WKG +LR+ AK + R++ E
Sbjct: 70 MNVLSGSTWKGTKLRIGEAKPDFRERIQAE 99
>gi|325185008|emb|CCA19499.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 430
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 48/81 (59%), Gaps = 7/81 (8%)
Query: 14 TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR----TKGRSFGYVDFFPSSHKSLSKL 69
T +YVG L ++T+D + +VFS G++KAV + + K R FGYV F+ + +S +K
Sbjct: 118 TTLYVGNLSYEITEDIIRRVFSPFGDIKAVRLAQHIQTKKFRGFGYVQFYDT--ESCTKA 175
Query: 70 FSTYNGCVWKGGRLRLERAKE 90
+T NG + G + ++ + E
Sbjct: 176 LAT-NGKIVIGRPMHVDLSGE 195
>gi|85097328|ref|XP_960425.1| polyadenylate-binding protein [Neurospora crassa OR74A]
gi|74696454|sp|Q7S6N6.1|PABP_NEUCR RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|28921916|gb|EAA31189.1| polyadenylate-binding protein [Neurospora crassa OR74A]
Length = 764
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 57/99 (57%), Gaps = 9/99 (9%)
Query: 1 MEKKEAEAEVEEQ----TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSF 53
+ KK+ +++ EE T +YV + +VTD++ ++F+ GEV + + R K R F
Sbjct: 224 IPKKDRQSKFEEMKANFTNVYVKNINNEVTDEEFRELFAKFGEVTSSSLARDQEGKSRGF 283
Query: 54 GYVDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERAKEHY 92
G+V+F ++H++ ++ NG ++G L + RA++ +
Sbjct: 284 GFVNF--TTHEAAAQAVDELNGKDFRGQDLYVGRAQKKH 320
>gi|396080756|gb|AFN82377.1| RNA-binding protein [Encephalitozoon romaleae SJ-2008]
Length = 104
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 16 IYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG-RSFGYVDFFPSSHKSLSKLFSTYN 74
+YV L VT+ D+A F S G + ++++ TK R + VDF +S LF N
Sbjct: 28 VYVKNLDASVTNSDIAAHFRSCGNISGINVITTKNTRKYAIVDFTSEKSVEMSLLF---N 84
Query: 75 GCVWKGGRLRLERAKE 90
G V KG ++ ++R +E
Sbjct: 85 GSVLKGKKIIVQRKRE 100
>gi|91088465|ref|XP_969645.1| PREDICTED: similar to splicing factor proline- and glutamine-rich
[Tribolium castaneum]
gi|270012217|gb|EFA08665.1| hypothetical protein TcasGA2_TC006331 [Tribolium castaneum]
Length = 454
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Query: 13 QTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKGRSFGYVDFFPSSHKSLSKLFST 72
+ R+Y+G LG +VT+DDL ++F GE + + + K +F DF+ + K+ ++L
Sbjct: 91 RNRLYIGNLGPEVTEDDLKELFGKYGEFGELFLNKEKFFAFVKYDFYANCEKAKNEL--- 147
Query: 73 YNGCVWKGGRLRLERAKEHYLARLK 97
+G V KG L++ A R+K
Sbjct: 148 -DGEVLKGKTLKIRFAPNSAAVRVK 171
>gi|346974495|gb|EGY17947.1| polyadenylate-binding protein [Verticillium dahliae VdLs.17]
Length = 759
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 55/99 (55%), Gaps = 9/99 (9%)
Query: 1 MEKKEAEAEVEEQ----TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSF 53
+ KK+ +++ EE T +YV + + +DD+ +F+ GEV + + R K R F
Sbjct: 225 IPKKDRQSKFEEMKANFTNVYVKNINSEASDDEFRDLFTKYGEVTSSSLARDQEGKSRGF 284
Query: 54 GYVDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERAKEHY 92
G+V+F ++H++ S+ NG ++G L + RA++ +
Sbjct: 285 GFVNF--TTHEAASQAVEELNGKDFRGQDLYVGRAQKKH 321
>gi|302920668|ref|XP_003053121.1| hypothetical protein NECHADRAFT_59146 [Nectria haematococca mpVI
77-13-4]
gi|256734061|gb|EEU47408.1| hypothetical protein NECHADRAFT_59146 [Nectria haematococca mpVI
77-13-4]
Length = 742
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 55/99 (55%), Gaps = 9/99 (9%)
Query: 1 MEKKEAEAEVEEQ----TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSF 53
+ KK+ +++ EE T +YV + + T+DD ++F G+V + + R K R F
Sbjct: 224 IPKKDRQSKFEEMKANFTNVYVKNISPEATEDDFRQLFEQYGDVTSSSLARDQEGKSRGF 283
Query: 54 GYVDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERAKEHY 92
G+V+F ++H+S +K NG ++G L + RA++ +
Sbjct: 284 GFVNF--TTHESAAKAVDELNGKDFRGQDLYVGRAQKKH 320
>gi|427796107|gb|JAA63505.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Rhipicephalus pulchellus]
Length = 505
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 37/56 (66%), Gaps = 4/56 (7%)
Query: 7 EAEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK----GRSFGYVDF 58
+++V E+ ++VG L +V D++L K+F+ G+V AV +VR K G+ FG+V F
Sbjct: 335 KSQVSEKQTVFVGNLAHEVQDEELWKLFAECGDVVAVRLVRDKVTGMGKGFGFVTF 390
>gi|302676167|ref|XP_003027767.1| hypothetical protein SCHCODRAFT_17463 [Schizophyllum commune
H4-8]
gi|300101454|gb|EFI92864.1| hypothetical protein SCHCODRAFT_17463 [Schizophyllum commune
H4-8]
Length = 562
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 6/89 (6%)
Query: 15 RIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRT-----KGRSFGYVDFFPSSHKSLSKL 69
RI++ G+ ++ DDL + S+ +V A+D + R F Y +++
Sbjct: 8 RIHISGITPNISHDDLKQRLSTFAKVNALDGLGATDSLGAPRRFAYATL-EGPPAQITRC 66
Query: 70 FSTYNGCVWKGGRLRLERAKEHYLARLKR 98
+ +G WKG RLR+ AK + R+KR
Sbjct: 67 VAALSGATWKGARLRVGDAKPDFRERIKR 95
>gi|194900595|ref|XP_001979841.1| GG21764 [Drosophila erecta]
gi|190651544|gb|EDV48799.1| GG21764 [Drosophila erecta]
Length = 675
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
Query: 6 AEAEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKGRSFGYVDFFPSSHKS 65
+EA+ + R+YVG L +TDD+L ++F GE+ + K +F VD+ P++ K+
Sbjct: 284 SEAKFSGRNRLYVGNLTNDITDDELREMFKPYGEIGEIFSNPDKNFTFLKVDYHPNAEKA 343
Query: 66 LSKLFSTYNGCVWKGGRLRLERAKEHYLARL 96
L +G + KG +LR+ A + R+
Sbjct: 344 KRAL----DGSMRKGRQLRVRFAPNATILRV 370
>gi|357157795|ref|XP_003577917.1| PREDICTED: 30S ribosomal protein 2, chloroplastic-like
[Brachypodium distachyon]
Length = 244
Score = 47.8 bits (112), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 8 AEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG----RSFGYVDFFPSSH 63
A V+ Q ++YVG L + VT + L FS GEV + + R G + +G+V F SS
Sbjct: 162 AFVDSQYKVYVGNLAKTVTTEVLKNFFSEKGEVLSATVSRIPGTPKSKGYGFVTF--SSE 219
Query: 64 KSLSKLFSTYNGCVWKGGRLRLERA 88
+ + ST+N +G +R+ RA
Sbjct: 220 EEVEAAVSTFNNTELEGQPIRVNRA 244
>gi|344236474|gb|EGV92577.1| Polyadenylate-binding protein 4 [Cricetulus griseus]
Length = 524
Score = 47.8 bits (112), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE+V DD+L ++FS G+ +V ++R K + FG+
Sbjct: 167 RKEREAELGAKAKEFTNVYIKNFGEEVDDDNLKELFSQFGKTLSVKVMRDPSGKSKGFGF 226
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 227 VSY--EKHEDANKAVEEMNGKEMSGKAIFVGRAQKKVERQAELKRKF 271
>gi|299748212|ref|XP_001837545.2| RNA-binding protein Cwf29 [Coprinopsis cinerea okayama7#130]
gi|298407867|gb|EAU84461.2| RNA-binding protein Cwf29 [Coprinopsis cinerea okayama7#130]
Length = 321
Score = 47.8 bits (112), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 5/106 (4%)
Query: 9 EVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK--GRSFGYVDFFPSSHKSL 66
E ++ RI+VGGL +T+ D+ +FS GE+ +++ R K G+ G+ +S
Sbjct: 26 EYKDSARIFVGGLHNDLTEGDVITIFSQYGEIMDINMPRDKETGKPRGFAFLMYEDQRST 85
Query: 67 SKLFSTYNGCVWKGGRLRLERAKEHYLARLKR---EWAEDDAQLVN 109
NG LR++ K++ ++K EW E D ++ N
Sbjct: 86 ILAVDNLNGAKVLERTLRVDHVKQYKQPKVKNADGEWVEQDEEVFN 131
>gi|157979|gb|AAA03215.1| no-on-transient A product form II [Drosophila melanogaster]
Length = 698
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 7 EAEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKGRSFGYVDFFPSSHKSL 66
E + + R+YVG L +TDD+L ++F GE+ + K +F VD+ P++ K+
Sbjct: 295 ETKFSGRNRLYVGNLTNDITDDELREMFKPYGEISEIFSNLDKNFTFLKVDYHPNAEKAK 354
Query: 67 SKLFSTYNGCVWKGGRLRLERAKEHYLARL 96
L +G + KG +LR+ A + R+
Sbjct: 355 RAL----DGSMRKGRQLRVRFAPNATILRV 380
>gi|159112276|ref|XP_001706367.1| Hypothetical protein GL50803_93463 [Giardia lamblia ATCC 50803]
gi|157434463|gb|EDO78693.1| hypothetical protein GL50803_93463 [Giardia lamblia ATCC 50803]
Length = 155
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 61/120 (50%), Gaps = 15/120 (12%)
Query: 16 IYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKGRSFGYVDFFP--------SSHKSLS 67
+YVGGL + T++ L ++FS ++K+V++ R R F ++ P L+
Sbjct: 4 VYVGGLSKNTTEESLRELFSRRVQIKSVELNRKHVRVFNDIEKAPVFAFLDCVCDEDQLA 63
Query: 68 KLFSTYNGCVWKGGRLRLERAKE---HYLARLKREWAEDDAQLVNPPVTDSVAPDNKDAT 124
K+ + YN C W G LR++ A++ ++ + E ++ D Q + P + PD+ A+
Sbjct: 64 KVLA-YNKCYWNGTYLRVQVARKGPYMHVPKTSEEKSQTDVQRLPEP---HIEPDSHCAS 119
>gi|345870533|ref|ZP_08822485.1| RNP-1 like RNA-binding protein [Thiorhodococcus drewsii AZ1]
gi|343921736|gb|EGV32449.1| RNP-1 like RNA-binding protein [Thiorhodococcus drewsii AZ1]
Length = 92
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%), Gaps = 4/47 (8%)
Query: 15 RIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK----GRSFGYVD 57
RIYVG L VTDDDL +FS GE+ A ++++ K + FG+VD
Sbjct: 2 RIYVGNLPYSVTDDDLRTIFSEFGELAAAEVIKDKFSGQSKGFGFVD 48
>gi|164657762|ref|XP_001730007.1| hypothetical protein MGL_2993 [Malassezia globosa CBS 7966]
gi|159103901|gb|EDP42793.1| hypothetical protein MGL_2993 [Malassezia globosa CBS 7966]
Length = 638
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 10/79 (12%)
Query: 16 IYVGGLGEKVTDDDLAKVFSSLGEV------KAVDIVRTKGRSFGYVDFFPSSHKSLSKL 69
+++GGL +T+DD+ F+ GEV K +D R KG FGYV+F S + +K
Sbjct: 497 LFIGGLAWALTEDDIWNAFAEFGEVTGVRLPKEIDSGRPKG--FGYVEFV--SQDNAAKA 552
Query: 70 FSTYNGCVWKGGRLRLERA 88
T NG G +R++ A
Sbjct: 553 LETMNGQALGGRPIRIDFA 571
>gi|336465951|gb|EGO54116.1| hypothetical protein NEUTE1DRAFT_87204 [Neurospora tetrasperma FGSC
2508]
gi|350287213|gb|EGZ68460.1| polyadenylate binding protein [Neurospora tetrasperma FGSC 2509]
Length = 764
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 57/99 (57%), Gaps = 9/99 (9%)
Query: 1 MEKKEAEAEVEEQ----TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSF 53
+ KK+ +++ EE T +YV + +VTD++ ++F+ GEV + + R K R F
Sbjct: 224 IPKKDRQSKFEEMKANFTNVYVKNINNEVTDEEFRELFAKFGEVTSSSLARDQEGKTRGF 283
Query: 54 GYVDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERAKEHY 92
G+V+F ++H++ ++ NG ++G L + RA++ +
Sbjct: 284 GFVNF--TTHEAAAQAVDELNGKDFRGQDLYVGRAQKKH 320
>gi|74137801|dbj|BAE24074.1| unnamed protein product [Mus musculus]
Length = 550
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE+V D +L ++FS G+ +V ++R K R FG+
Sbjct: 77 RKEREAELGAKAKEFTNVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDSSGKSRGFGF 136
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 137 VSY--EKHEDANKAVDEMNGKEMSGKAIFVGRAQKKVERQAELKRKF 181
>gi|389738723|gb|EIM79919.1| hypothetical protein STEHIDRAFT_172916 [Stereum hirsutum FP-91666
SS1]
Length = 649
Score = 47.4 bits (111), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 6/106 (5%)
Query: 15 RIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIV-----RTKGRSFGYVDFFPSSHKSLSKL 69
R++V GL +T DL+ G + ++D + R F YV + K L K
Sbjct: 8 RLHVSGLTPSITLADLSTRLGMYGSITSLDKFGEVDALGQPRKFAYVTLETTKGK-LGKC 66
Query: 70 FSTYNGCVWKGGRLRLERAKEHYLARLKREWAEDDAQLVNPPVTDS 115
+ +G WKG +LR+ AK + R R ++ L++P T S
Sbjct: 67 MNVLSGSTWKGAKLRIGEAKPDFRERYVRSYSNRPTILIHPSFTSS 112
>gi|443906773|gb|AGD79327.1| RH34608p1 [Drosophila melanogaster]
Length = 740
Score = 47.4 bits (111), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 7 EAEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKGRSFGYVDFFPSSHKSL 66
E + + R+YVG L +TDD+L ++F GE+ + K +F VD+ P++ K+
Sbjct: 295 ETKFSGRNRLYVGNLTNDITDDELREMFKPYGEISEIFSNLDKNFTFLKVDYHPNAEKAK 354
Query: 67 SKLFSTYNGCVWKGGRLRLERAKEHYLARL 96
L +G + KG +LR+ A + R+
Sbjct: 355 RAL----DGSMRKGRQLRVRFAPNATILRV 380
>gi|427796305|gb|JAA63604.1| Putative alternative splicing factor srp20/9g8 rrm superfamily,
partial [Rhipicephalus pulchellus]
Length = 188
Score = 47.4 bits (111), Expect = 0.030, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 9 EVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKGRSFGYVDFFPSSHKSLSK 68
E + QTRI+VGGLG+ + DDL + F G + V + + F +++F + +
Sbjct: 3 ERKPQTRIFVGGLGDNMAKDDLEREFGKYGRLNQVWVAQNP-PGFAFLEF--DDDRDADE 59
Query: 69 LFSTYNGCVWKGGRLRLERAKE 90
NG V G RLR+E ++E
Sbjct: 60 AIRNMNGVVLNGSRLRVEYSRE 81
>gi|91094279|ref|XP_970760.1| PREDICTED: similar to splicing factor proline- and glutamine-rich
[Tribolium castaneum]
gi|270014396|gb|EFA10844.1| hypothetical protein TcasGA2_TC001621 [Tribolium castaneum]
Length = 495
Score = 47.4 bits (111), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 4/76 (5%)
Query: 13 QTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKGRSFGYVDFFPSSHKSLSKLFST 72
+TR+YVG +G VT+DDL ++F GE + + K +F VD+ ++ K+ +L
Sbjct: 141 RTRLYVGNIGNDVTEDDLTELFRPYGETSEHFVNKEKNFAFIRVDYRANAEKAKREL--- 197
Query: 73 YNGCVWKGGRLRLERA 88
+G ++KG L++ A
Sbjct: 198 -DGILFKGKNLKIRFA 212
>gi|390601583|gb|EIN10977.1| hypothetical protein PUNSTDRAFT_63827 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 315
Score = 47.4 bits (111), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 6/104 (5%)
Query: 9 EVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK--GRSFGYVDFFPSSHKSL 66
E ++ IY+GGL ++T+ D+ +FS GE V++VR K G+S G+ +S
Sbjct: 46 EYKDSAYIYIGGLNYELTEGDIITIFSQYGEPLDVNLVRDKETGKSKGFAFLMYEDQRST 105
Query: 67 SKLFSTYNGCVWKGGRLRLERAKEHYLARLKREWAEDDAQLVNP 110
NG LR++ +++ ++K E D +LV+P
Sbjct: 106 VLAVDNLNGAQVLNRTLRVDHVRDYKQKKVKGE----DGELVDP 145
>gi|357457543|ref|XP_003599052.1| 30S ribosomal protein [Medicago truncatula]
gi|355488100|gb|AES69303.1| 30S ribosomal protein [Medicago truncatula]
Length = 235
Score = 47.4 bits (111), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 10 VEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKGRS----FGYVDFFPSSHKS 65
V+ ++YVG L + VT D L K FS G + + R G S FG+V F SS +
Sbjct: 155 VDSPYKVYVGNLAKNVTSDSLKKFFSEKGNALSAKVSRAPGTSKSSGFGFVTF--SSDED 212
Query: 66 LSKLFSTYNGCVWKGGRLRLERA 88
+ S++N + +G ++R+ +A
Sbjct: 213 VEAAISSFNNALLEGQKIRVNKA 235
>gi|219118859|ref|XP_002180196.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408453|gb|EEC48387.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 449
Score = 47.4 bits (111), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 51/84 (60%), Gaps = 7/84 (8%)
Query: 13 QTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVD--IVRTKGRS---FGYVDFFPSSHKSLS 67
+T ++VG + E V DDDL+ +F S+ ++++V +VR S +G+V FPS + +
Sbjct: 85 ETTLFVGNIDEFVHDDDLSGLFQSVSKLQSVPACVVRKPDMSSLQYGFVS-FPSVEEKEA 143
Query: 68 KLFSTYNGCVWKGGRLRLERAKEH 91
+ +NG WKG +LR++ ++H
Sbjct: 144 AIIR-FNGYEWKGKKLRVQEIRDH 166
>gi|348544233|ref|XP_003459586.1| PREDICTED: hypothetical protein LOC100697480 [Oreochromis
niloticus]
Length = 304
Score = 47.4 bits (111), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 8 AEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK--GRSFGYVDFFPSSHKS 65
+E ++ I+VGG ++T+ DL VFS GE+ +++VR K G+S G+ +S
Sbjct: 30 SEYKDSAWIFVGGFPYELTEGDLICVFSQYGEIVNINLVRDKKTGKSKGFCFICYEDQRS 89
Query: 66 LSKLFSTYNGCVWKGGRLRLERAKEH 91
+NG KG +R++ K++
Sbjct: 90 TILAVDNFNGIKIKGRTIRVDHVKDY 115
>gi|126660986|ref|ZP_01732073.1| RNA-binding region RNP-1 [Cyanothece sp. CCY0110]
gi|126617726|gb|EAZ88508.1| RNA-binding region RNP-1 [Cyanothece sp. CCY0110]
Length = 81
Score = 47.4 bits (111), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 16 IYVGGLGEKVTDDDLAKVFSSLGEVKAVDIV--RTKGRSFGYVDFFPSSHKSLSKLFSTY 73
IYVG L +VTD DL VFS G VK V I R GR G+ ++ + SK T
Sbjct: 3 IYVGNLAYEVTDADLNTVFSDYGSVKRVHIPTDRETGRPRGFAFVEMNTEEEESKAIETL 62
Query: 74 NGCVWKGGRLRLERAK 89
+G W G +++ +A+
Sbjct: 63 DGAEWMGRSMKVNQAR 78
>gi|74227727|dbj|BAE35704.1| unnamed protein product [Mus musculus]
Length = 165
Score = 47.4 bits (111), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 60/131 (45%), Gaps = 9/131 (6%)
Query: 2 EKKEAEAEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK--GRSFGYVDFF 59
EK +E + I+VGGL ++T+ D+ VFS GE+ +++VR K G+S G+
Sbjct: 24 EKVSWHSEYKHSAWIFVGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLC 83
Query: 60 PSSHKSLSKLFSTYNGCVWKGGRLRLERAKEHYLAR-------LKREWAEDDAQLVNPPV 112
+S +NG KG +R++ + + + RE E + PP
Sbjct: 84 YEDQRSTVLAVDNFNGIKIKGRTIRVDHVSNYRAPQESEDVDDVTRELQEKGCGVKTPPS 143
Query: 113 TDSVAPDNKDA 123
+ +++DA
Sbjct: 144 SPPEVSEDEDA 154
>gi|149023879|gb|EDL80376.1| rCG31475, isoform CRA_b [Rattus norvegicus]
Length = 656
Score = 47.0 bits (110), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE+V D++L ++FS G+ +V ++R K + FG+
Sbjct: 176 RKEREAELGAKAKEFTNVYIKNFGEEVDDENLRELFSQFGKTLSVKVMRDCSGKSKGFGF 235
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 236 VSY--EKHEDANKAVEEMNGKEMSGKSIFVGRAQKKVERQAELKRKF 280
>gi|328876236|gb|EGG24599.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 497
Score = 47.0 bits (110), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 62/124 (50%), Gaps = 16/124 (12%)
Query: 16 IYVGGLGEKVTDDDLAKVFSSLGEVKAVDIV--RTKG--RSFGYVDFFPSSHKSLSKLFS 71
++VGG+ T+++L +FS++G VK V I+ R+ G + +G+V F ++ + +
Sbjct: 114 VFVGGIARNTTEEELQDLFSTIGNVKQVRIMKDRSNGENKGYGFVSF--ANKSNCKEAVV 171
Query: 72 TYNGCVWKGGRLRL---ERAKEHYLARLKREWAEDDAQLVNPPVTDSVA-------PDNK 121
+N +KG LR+ E ++ ++ L +E +D L+ +D + PDN
Sbjct: 172 QFNNKEFKGKNLRVKFSENKRKIFIGNLPKELKKDQLLLILADHSDGITNVDFLTDPDNS 231
Query: 122 DATR 125
R
Sbjct: 232 SRNR 235
>gi|157978|gb|AAA03214.1| no-on-transient A product form I [Drosophila melanogaster]
Length = 700
Score = 47.0 bits (110), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 7 EAEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKGRSFGYVDFFPSSHKSL 66
E + + R+YVG L +TDD+L ++F GE+ + K +F VD+ P++ K+
Sbjct: 295 ETKFSGRNRLYVGNLTNDITDDELREMFKPYGEISEIFSNLDKNFTFLKVDYHPNAEKAK 354
Query: 67 SKLFSTYNGCVWKGGRLRLERAKEHYLARL 96
L +G + KG +LR+ A + R+
Sbjct: 355 RAL----DGSMRKGRQLRVRFAPNATILRV 380
>gi|149023878|gb|EDL80375.1| rCG31475, isoform CRA_a [Rattus norvegicus]
Length = 660
Score = 47.0 bits (110), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE+V D++L ++FS G+ +V ++R K + FG+
Sbjct: 176 RKEREAELGAKAKEFTNVYIKNFGEEVDDENLRELFSQFGKTLSVKVMRDCSGKSKGFGF 235
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 236 VSY--EKHEDANKAVEEMNGKEMSGKSIFVGRAQKKVERQAELKRKF 280
>gi|198386356|ref|NP_001094008.1| polyadenylate-binding protein 4 [Rattus norvegicus]
gi|183985833|gb|AAI66452.1| Pabpc4 protein [Rattus norvegicus]
Length = 644
Score = 47.0 bits (110), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE+V D++L ++FS G+ +V ++R K + FG+
Sbjct: 176 RKEREAELGAKAKEFTNVYIKNFGEEVDDENLRELFSQFGKTLSVKVMRDCSGKSKGFGF 235
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 236 VSY--EKHEDANKAVEEMNGKEMSGKSIFVGRAQKKVERQAELKRKF 280
>gi|284929630|ref|YP_003422152.1| RRM domain-containing RNA-binding protein [cyanobacterium UCYN-A]
gi|284810074|gb|ADB95771.1| RRM domain-containing RNA-binding protein [cyanobacterium UCYN-A]
Length = 96
Score = 47.0 bits (110), Expect = 0.041, Method: Composition-based stats.
Identities = 31/77 (40%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 16 IYVGGLGEKVTDDDLAKVFSSLGEVKAVDIV--RTKGRSFGYVDFFPSSHKSLSKLFSTY 73
IYVG L VT +DL +VF+ GEVK V I R GR G+ +S + ST
Sbjct: 3 IYVGNLSYDVTKEDLNEVFTDYGEVKRVHIPTDRDTGRMRGFAFVEMNSDDQEEQAISTL 62
Query: 74 NGCVWKGGRLRLERAKE 90
+G W G L++ +AKE
Sbjct: 63 DGAEWMGRTLKVNKAKE 79
>gi|387594015|gb|EIJ89039.1| hypothetical protein NEQG_00858 [Nematocida parisii ERTm3]
gi|387595783|gb|EIJ93406.1| hypothetical protein NEPG_01748 [Nematocida parisii ERTm1]
Length = 512
Score = 47.0 bits (110), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 2 EKKEAEAEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR-----TKGRSFGYV 56
+K++ E ++ +Q IYVG + T+ +L ++FS +G++ + I+R K + + YV
Sbjct: 7 QKEKKEGQIGKQNTIYVGDIPMATTESELFQIFSKVGQIYTISILRKEVSIVKDKCYAYV 66
Query: 57 DFFPSSHKSLSKLFSTYNGCVWKGGRLRL 85
FF S S+ T+N G ++R+
Sbjct: 67 TFFDES--SVPIAIETFNFYSLHGSQIRV 93
>gi|312385922|gb|EFR30310.1| hypothetical protein AND_00169 [Anopheles darlingi]
Length = 1255
Score = 47.0 bits (110), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 15 RIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKGRS-------FGYVDFFPSSHKSLS 67
R++VG + + ++++L F + G V++V+ V+TK + FG+V + + +S
Sbjct: 6 RLFVGNIPQGTSEEELRTEFGAYGVVESVE-VKTKPNALSGAADIFGFVSL-QTEDRIVS 63
Query: 68 KLFSTYNGCVWKGGRLRLERAKEHYLARLKREWAEDDAQLVNPPVTDS 115
+ + +KG L + RAKE +L RLKRE E AQ N VT S
Sbjct: 64 QCIKEFREQKYKGAFLNVSRAKESFLDRLKREREEAGAQKQNKNVTTS 111
>gi|224078006|ref|XP_002190593.1| PREDICTED: embryonic polyadenylate-binding protein-like
[Taeniopygia guttata]
Length = 629
Score = 47.0 bits (110), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 62/119 (52%), Gaps = 17/119 (14%)
Query: 3 KKEAEAEVE----EQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIV-----RTKGRSF 53
+KE EAEV E T +Y+ G+ + DD L ++FS G+ +V ++ R+KG F
Sbjct: 176 RKEREAEVGARAIEFTNVYIKNFGDDMDDDRLREIFSRFGKTLSVKVMMDNNGRSKG--F 233
Query: 54 GYVDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERAKEHYLAR---LKREWAEDDAQLVN 109
G+V+F H+ K + NG G L + RA++ L R LKR++ + + VN
Sbjct: 234 GFVNF--EKHEEAQKAVADMNGKEINGRLLYVGRAQKR-LERQSELKRKFEQMKQERVN 289
>gi|390352150|ref|XP_791635.3| PREDICTED: RNA-binding motif protein, X-linked 2-like
[Strongylocentrotus purpuratus]
Length = 232
Score = 46.6 bits (109), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 9 EVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK--GRSFGYVDFFPSSHKSL 66
+ ++ I++GG+ ++T+ D+ VFS GE+ +++VR K G+S GY +S
Sbjct: 57 QYKDSAYIFIGGMPFELTEGDVLCVFSQYGEIVNINLVRDKKTGKSKGYCFIAYEDQRST 116
Query: 67 SKLFSTYNGCVWKGGRLRLERAKEH 91
+NG KG LR++ E+
Sbjct: 117 ILAVDNFNGIKLKGRTLRVDHVSEY 141
>gi|149023880|gb|EDL80377.1| rCG31475, isoform CRA_c [Rattus norvegicus]
Length = 630
Score = 46.6 bits (109), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE+V D++L ++FS G+ +V ++R K + FG+
Sbjct: 176 RKEREAELGAKAKEFTNVYIKNFGEEVDDENLRELFSQFGKTLSVKVMRDCSGKSKGFGF 235
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 236 VSY--EKHEDANKAVEEMNGKEMSGKSIFVGRAQKKVERQAELKRKF 280
>gi|449518867|ref|XP_004166457.1| PREDICTED: uncharacterized protein LOC101228216 [Cucumis sativus]
Length = 828
Score = 46.6 bits (109), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 11/115 (9%)
Query: 3 KKEAE--AEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK----GRSFGYV 56
KK AE A + +YVGG+ + ++DDL + S+GEV V ++R+K + F +V
Sbjct: 426 KKHAELLALPPHGSEVYVGGIPQDSSEDDLRRFCESIGEVTEVRVMRSKESNENKGFAFV 485
Query: 57 DFFPSSHKSLSKLFSTYNGCVWKGGRLRL--ERAKEH-YLARLKREWAEDDAQLV 108
F S + SK N +KG +++ +AK ++ + R W E+D + V
Sbjct: 486 TF--RSVELASKAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKV 538
>gi|158335765|ref|YP_001516937.1| RNA-binding protein [Acaryochloris marina MBIC11017]
gi|359461305|ref|ZP_09249868.1| RNA-binding protein [Acaryochloris sp. CCMEE 5410]
gi|158306006|gb|ABW27623.1| RNA-binding protein [Acaryochloris marina MBIC11017]
Length = 95
Score = 46.6 bits (109), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 6/78 (7%)
Query: 16 IYVGGLGEKVTDDDLAKVFSSLGEVKAVD--IVRTKG--RSFGYVDFFPSSHKSLSKLFS 71
+Y+G L +VT+DDL+ VF+ GEVK V + R G R FG+V+ S++ K
Sbjct: 3 VYIGNLSYEVTEDDLSAVFAEYGEVKQVKLPVDRESGRKRGFGFVEMQDESNE--EKAIE 60
Query: 72 TYNGCVWKGGRLRLERAK 89
+G W G L++ +AK
Sbjct: 61 ELDGAEWMGRTLKVNKAK 78
>gi|320163233|gb|EFW40132.1| RNA binding domain-containing protein 39 [Capsaspora owczarzaki
ATCC 30864]
Length = 600
Score = 46.6 bits (109), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 11 EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKGRSFGYVDFFPSSHKSLSKLF 70
++QTR+YVG L +T+ D+ +FS GEV +V + R G+S GY F + +KL
Sbjct: 352 KQQTRVYVGSLDFALTEADVKSLFSPCGEVISVTLNRDNGKSKGYA-FVQFADAGAAKLA 410
Query: 71 STYNGCVWKGGRLRLERAKE 90
NG G L++ A +
Sbjct: 411 MELNGVEVAGRPLKVNFATD 430
>gi|407920118|gb|EKG13336.1| hypothetical protein MPH_09618 [Macrophomina phaseolina MS6]
Length = 768
Score = 46.6 bits (109), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 10/100 (10%)
Query: 1 MEKKEAEAEVEEQ----TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR----TKGRS 52
+ KK+ ++ EE T +YV + +VTDD+ ++F G++ + + K R
Sbjct: 221 IPKKDRMSKFEEMKANFTNVYVKNIDLEVTDDEFRELFEKYGQITSASLAHDNETGKSRG 280
Query: 53 FGYVDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERAKEHY 92
FG+V+F H+S +K N WKG +L + RA++ +
Sbjct: 281 FGFVNFV--KHESAAKAVDELNDKDWKGQKLYVGRAQKKH 318
>gi|358394186|gb|EHK43587.1| hypothetical protein TRIATDRAFT_85620 [Trichoderma atroviride IMI
206040]
Length = 1057
Score = 46.6 bits (109), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 3 KKEAEAEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRT---KGRSFGYVDF 58
K+ E V E ++V GLG T+D++ ++FS G + +++ R+ KGR F ++DF
Sbjct: 749 KRNREGAVAEGREVHVSGLGPSTTEDEIREIFSKYGTIARINVPRSDNGKGRGFAFIDF 807
>gi|70990636|ref|XP_750167.1| polyadenylate-binding protein [Aspergillus fumigatus Af293]
gi|74669855|sp|Q4WK03.1|PABP_ASPFU RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|66847799|gb|EAL88129.1| polyadenylate-binding protein [Aspergillus fumigatus Af293]
gi|159130644|gb|EDP55757.1| polyadenylate-binding protein [Aspergillus fumigatus A1163]
Length = 753
Score = 46.6 bits (109), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 20/134 (14%)
Query: 1 MEKKEAEAEVEEQ----TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSF 53
+ KK+ +++ EE T +Y+ + ++VTD++ K+F GE+ + + R K R F
Sbjct: 216 ISKKDRQSKFEEMKANFTNVYIKNIDQEVTDEEFRKMFEKFGEITSATLSRDQEGKSRGF 275
Query: 54 GYVDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA-----------KEHYLARLKREWAE 102
G+V+F S+H S N KG +L + RA K++ ARL++
Sbjct: 276 GFVNF--STHDSAQAAVDEMNDKEIKGQKLYVGRAQKKHEREEELRKQYEAARLEKASKY 333
Query: 103 DDAQLVNPPVTDSV 116
L +TD V
Sbjct: 334 QGVNLYVKNLTDDV 347
>gi|119496945|ref|XP_001265244.1| polyadenylate-binding protein [Neosartorya fischeri NRRL 181]
gi|158512647|sp|A1D4K4.1|PABP_NEOFI RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|119413406|gb|EAW23347.1| polyadenylate-binding protein [Neosartorya fischeri NRRL 181]
Length = 751
Score = 46.6 bits (109), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 20/134 (14%)
Query: 1 MEKKEAEAEVEEQ----TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSF 53
+ KK+ +++ EE T +Y+ + ++VTD++ K+F GE+ + + R K R F
Sbjct: 216 ISKKDRQSKFEEMKANFTNVYIKNIDQEVTDEEFRKMFEKFGEITSATLSRDQEGKSRGF 275
Query: 54 GYVDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA-----------KEHYLARLKREWAE 102
G+V+F S+H S N KG +L + RA K++ ARL++
Sbjct: 276 GFVNF--STHDSAQAAVDEMNDKEIKGQKLYVGRAQKKHEREEELRKQYEAARLEKASKY 333
Query: 103 DDAQLVNPPVTDSV 116
L +TD V
Sbjct: 334 QGVNLYVKNLTDDV 347
>gi|348553000|ref|XP_003462315.1| PREDICTED: polyadenylate-binding protein 4-like isoform 4 [Cavia
porcellus]
Length = 631
Score = 46.6 bits (109), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE+V D++L ++FS G+ +V ++R K + FG+
Sbjct: 176 RKEREAELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGF 235
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 236 VSY--EKHEDANKAVEEMNGKEINGKIIFVGRAQKKVERQAELKRKF 280
>gi|348552994|ref|XP_003462312.1| PREDICTED: polyadenylate-binding protein 4-like isoform 1 [Cavia
porcellus]
Length = 660
Score = 46.2 bits (108), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE+V D++L ++FS G+ +V ++R K + FG+
Sbjct: 176 RKEREAELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGF 235
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 236 VSY--EKHEDANKAVEEMNGKEINGKIIFVGRAQKKVERQAELKRKF 280
>gi|449444797|ref|XP_004140160.1| PREDICTED: uncharacterized protein LOC101218373 [Cucumis sativus]
Length = 784
Score = 46.2 bits (108), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 11/115 (9%)
Query: 3 KKEAE--AEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK----GRSFGYV 56
KK AE A + +YVGG+ + ++DDL + S+GEV V ++R+K + F +V
Sbjct: 382 KKHAELLALPPHGSEVYVGGIPQDSSEDDLRRFCESIGEVTEVRVMRSKESNENKGFAFV 441
Query: 57 DFFPSSHKSLSKLFSTYNGCVWKGGRLRL--ERAKEH-YLARLKREWAEDDAQLV 108
F S + SK N +KG +++ +AK ++ + R W E+D + V
Sbjct: 442 TF--RSVELASKAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKV 494
>gi|426215230|ref|XP_004001877.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Ovis aries]
Length = 631
Score = 46.2 bits (108), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE+V D++L ++FS G+ +V ++R K + FG+
Sbjct: 176 RKEREAELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGF 235
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 236 VSY--EKHEDANKAVEEMNGKEITGKVIFVGRAQKKVERQAELKRKF 280
>gi|390594976|gb|EIN04384.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 611
Score = 46.2 bits (108), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 50/88 (56%), Gaps = 7/88 (7%)
Query: 6 AEAEVEEQTR-IYVGGLGEKVTDDDLAKVFSSLGEVKA--VDIVRTKG--RSFGYVDFFP 60
A AE EE+++ I+VG L V DD LA F+ GEV + V+I R G R FG+V+F
Sbjct: 334 APAEQEEESKTIFVGRLSWNVDDDQLASEFAECGEVVSARVNIDRNTGKSRGFGHVEFAD 393
Query: 61 SSHKSLSKLFSTYNGCVWKGGRLRLERA 88
+S S+ K T NG G + ++RA
Sbjct: 394 AS--SVQKAIDTMNGKEIDGRPVNVDRA 419
>gi|350585908|ref|XP_003482078.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Sus scrofa]
Length = 660
Score = 46.2 bits (108), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE+V D++L ++FS G+ +V ++R K + FG+
Sbjct: 176 RKEREAELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGF 235
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 236 VSY--EKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKF 280
>gi|34419622|ref|NP_570951.2| polyadenylate-binding protein 4 isoform 1 [Mus musculus]
gi|33991671|gb|AAH56432.1| Poly(A) binding protein, cytoplasmic 4 [Mus musculus]
gi|148698437|gb|EDL30384.1| mCG5546, isoform CRA_c [Mus musculus]
Length = 660
Score = 46.2 bits (108), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE+V D +L ++FS G+ +V ++R K + FG+
Sbjct: 176 RKEREAELGAKAKEFTNVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDSSGKSKGFGF 235
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 236 VSY--EKHEDANKAVEEMNGKEMSGKAIFVGRAQKKVERQAELKRKF 280
>gi|348552996|ref|XP_003462313.1| PREDICTED: polyadenylate-binding protein 4-like isoform 2 [Cavia
porcellus]
Length = 644
Score = 46.2 bits (108), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE+V D++L ++FS G+ +V ++R K + FG+
Sbjct: 176 RKEREAELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGF 235
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 236 VSY--EKHEDANKAVEEMNGKEINGKIIFVGRAQKKVERQAELKRKF 280
>gi|302696573|ref|XP_003037965.1| hypothetical protein SCHCODRAFT_63222 [Schizophyllum commune H4-8]
gi|300111662|gb|EFJ03063.1| hypothetical protein SCHCODRAFT_63222 [Schizophyllum commune H4-8]
Length = 309
Score = 46.2 bits (108), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 62/136 (45%), Gaps = 10/136 (7%)
Query: 9 EVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK--GRSFGYVDFFPSSHKSL 66
E ++ I+VGGL ++T+ D+ +FS GE+ +++ R K G+ G+ +S
Sbjct: 27 EYKDSAYIFVGGLNRELTEGDVITIFSQYGEIMDINMPREKETGKPKGFAFVMYEDQRST 86
Query: 67 SKLFSTYNGCVWKGGRLRLERAKEHYLARLKR---EWAEDDAQLVN--PPVT---DSVAP 118
NG LR++ K + R K EW + + Q +N PP+ + +
Sbjct: 87 VLAVDNLNGSKVAERTLRVDHVKNYKQKRTKNEEGEWVDPEEQSLNAAPPMIIDGEESSS 146
Query: 119 DNKDATRLDTPKKLLD 134
D DA ++D + D
Sbjct: 147 DESDAPKIDPEDPMYD 162
>gi|335291035|ref|XP_003127861.2| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Sus scrofa]
Length = 644
Score = 46.2 bits (108), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE+V D++L ++FS G+ +V ++R K + FG+
Sbjct: 176 RKEREAELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGF 235
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 236 VSY--EKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKF 280
>gi|13096978|gb|AAH03283.1| Poly(A) binding protein, cytoplasmic 4 [Mus musculus]
Length = 660
Score = 46.2 bits (108), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE+V D +L ++FS G+ +V ++R K + FG+
Sbjct: 176 RKEREAELGAKAKEFTNVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDSSGKSKGFGF 235
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 236 VSY--EKHEDANKAVEEMNGKEMSGKAIFVGRAQKKVERQAELKRKF 280
>gi|348552998|ref|XP_003462314.1| PREDICTED: polyadenylate-binding protein 4-like isoform 3 [Cavia
porcellus]
Length = 615
Score = 46.2 bits (108), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE+V D++L ++FS G+ +V ++R K + FG+
Sbjct: 176 RKEREAELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGF 235
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 236 VSY--EKHEDANKAVEEMNGKEINGKIIFVGRAQKKVERQAELKRKF 280
>gi|139948570|ref|NP_001077193.1| polyadenylate-binding protein 4 [Bos taurus]
gi|134024563|gb|AAI34510.1| PABPC4 protein [Bos taurus]
gi|296488909|tpg|DAA31022.1| TPA: poly A binding protein, cytoplasmic 4 [Bos taurus]
Length = 645
Score = 46.2 bits (108), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE+V D++L ++FS G+ +V ++R K + FG+
Sbjct: 176 RKEREAELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGF 235
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 236 VSY--EKHEDANKAVEEMNGKEITGKVIFVGRAQKKVERQAELKRKF 280
>gi|426215228|ref|XP_004001876.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Ovis aries]
Length = 644
Score = 46.2 bits (108), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE+V D++L ++FS G+ +V ++R K + FG+
Sbjct: 176 RKEREAELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGF 235
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 236 VSY--EKHEDANKAVEEMNGKEITGKVIFVGRAQKKVERQAELKRKF 280
>gi|426215226|ref|XP_004001875.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Ovis aries]
Length = 660
Score = 46.2 bits (108), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE+V D++L ++FS G+ +V ++R K + FG+
Sbjct: 176 RKEREAELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGF 235
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 236 VSY--EKHEDANKAVEEMNGKEITGKVIFVGRAQKKVERQAELKRKF 280
>gi|414868617|tpg|DAA47174.1| TPA: hypothetical protein ZEAMMB73_366443 [Zea mays]
Length = 609
Score = 46.2 bits (108), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 66/134 (49%), Gaps = 9/134 (6%)
Query: 5 EAEAEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK---GRSFGYVDFFPS 61
E + E+ T ++VGGL T+ L ++FSS GE+ I++ + + +G+V F
Sbjct: 10 EQDRRTEKGTEVFVGGLPRSATESTLREIFSSCGEIIDARIMKDQSGHSKGYGFVRFAKR 69
Query: 62 SHKSLSKLFSTYNGCVWKGGRLRLERAKEH---YLARLKREWA-EDDAQLVNPPVTDSVA 117
+ + +K NG +G RL +E + + + L +EW E+ +L++ D V+
Sbjct: 70 DYANTAK--RQKNGIEVQGKRLVVELSMDQDTVFFGNLCKEWTLEEFEELIHKAFKDVVS 127
Query: 118 PDNKDATRLDTPKK 131
D A+ L + K
Sbjct: 128 VDLAMASNLGSSNK 141
>gi|22507391|ref|NP_683717.1| polyadenylate-binding protein 4 isoform 2 [Mus musculus]
gi|16307591|gb|AAH10345.1| Poly(A) binding protein, cytoplasmic 4 [Mus musculus]
Length = 615
Score = 46.2 bits (108), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE+V D +L ++FS G+ +V ++R K + FG+
Sbjct: 176 RKEREAELGAKAKEFTNVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDSSGKSKGFGF 235
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 236 VSY--EKHEDANKAVEEMNGKEMSGKAIFVGRAQKKVERQAELKRKF 280
>gi|15220241|ref|NP_175181.1| RNA-binding protein 47C' [Arabidopsis thaliana]
gi|75337808|sp|Q9SX80.1|R47CP_ARATH RecName: Full=Polyadenylate-binding protein RBP47C';
Short=Poly(A)-binding protein RBP47C'; AltName:
Full=RNA-binding protein 47C'; Short=AtRBP47C prime;
Short=AtRBP47C'
gi|5668811|gb|AAD46037.1|AC007519_22 Contains 3 PF|00076 RNA recognition motif domains. EST gb|T20424
comes from this gene [Arabidopsis thaliana]
gi|110743035|dbj|BAE99410.1| hypothetical protein [Arabidopsis thaliana]
gi|124301030|gb|ABN04767.1| At1g47500 [Arabidopsis thaliana]
gi|332194057|gb|AEE32178.1| RNA-binding protein 47C' [Arabidopsis thaliana]
Length = 434
Score = 46.2 bits (108), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 8/78 (10%)
Query: 14 TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKGRSFGYVDFF--PSSHKSLSKLFS 71
T I+VGGL VTD+DL + FS GE+ +V I G+ G+V F P++ ++L KL
Sbjct: 306 TTIFVGGLDSSVTDEDLKQPFSEFGEIVSVKI--PVGKGCGFVQFVNRPNAEEALEKL-- 361
Query: 72 TYNGCVWKGGRLRLERAK 89
NG V +RL +
Sbjct: 362 --NGTVIGKQTVRLSWGR 377
>gi|167391010|ref|XP_001739600.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165896676|gb|EDR24023.1| hypothetical protein EDI_139460 [Entamoeba dispar SAW760]
Length = 178
Score = 46.2 bits (108), Expect = 0.076, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Query: 4 KEAEAEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRT--KGRSFGYVDFFPS 61
KE ++ R++VGG+ + +T+ + + F + G+V ++ I+ K F YV+
Sbjct: 41 KENLIDLPLTKRLFVGGIDKSITEQQIKERFINYGKVLSIQIINKPWKNSLFAYVELKAK 100
Query: 62 SHKSLSKLFSTYNGCVWKGGRLRLERAKEHYLARLKRE 99
+ L + ST N WKG + R+E A + L + K+E
Sbjct: 101 NELLLHQCLSTLNMLTWKGLKFRVEYANPNILDKYKQE 138
>gi|148698435|gb|EDL30382.1| mCG5546, isoform CRA_a [Mus musculus]
Length = 632
Score = 46.2 bits (108), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE+V D +L ++FS G+ +V ++R K + FG+
Sbjct: 193 RKEREAELGAKAKEFTNVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDSSGKSKGFGF 252
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 253 VSY--EKHEDANKAVEEMNGKEMSGKAIFVGRAQKKVERQAELKRKF 297
>gi|358394883|gb|EHK44276.1| hypothetical protein TRIATDRAFT_79372 [Trichoderma atroviride IMI
206040]
Length = 746
Score = 46.2 bits (108), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 54/99 (54%), Gaps = 9/99 (9%)
Query: 1 MEKKEAEAEVEEQ----TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSF 53
+ KK+ +++ EE T +YV + VTD++ ++F G+V + + R K R F
Sbjct: 223 IPKKDRQSKFEEMKANFTNVYVKNISPDVTDNEFRELFEKYGDVTSSSLARDQEGKSRGF 282
Query: 54 GYVDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERAKEHY 92
G+V+F ++H++ K NG ++G L + RA++ +
Sbjct: 283 GFVNF--TTHEAAYKAVDELNGNDFRGQELYVGRAQKKH 319
>gi|170674510|gb|ACB30143.1| poly(A) RNA binding protein [Epichloe festucae]
Length = 739
Score = 46.2 bits (108), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 54/99 (54%), Gaps = 9/99 (9%)
Query: 1 MEKKEAEAEVEEQ----TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSF 53
+ KK+ +++ EE T IYV + + +DD+ ++F GE+ + + R K R F
Sbjct: 223 IPKKDRQSKFEEMKANFTNIYVKNVNPEASDDEFRELFERYGEITSSSLARDQDGKSRGF 282
Query: 54 GYVDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERAKEHY 92
G+V++ ++H+S K NG +KG L + RA++ +
Sbjct: 283 GFVNY--TTHESAYKAVDELNGKDFKGQDLYVGRAQKKH 319
>gi|212274617|ref|NP_001130787.1| uncharacterized protein LOC100191891 [Zea mays]
gi|194690114|gb|ACF79141.1| unknown [Zea mays]
gi|414868618|tpg|DAA47175.1| TPA: hypothetical protein ZEAMMB73_366443 [Zea mays]
Length = 605
Score = 46.2 bits (108), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 66/134 (49%), Gaps = 9/134 (6%)
Query: 5 EAEAEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK---GRSFGYVDFFPS 61
E + E+ T ++VGGL T+ L ++FSS GE+ I++ + + +G+V F
Sbjct: 10 EQDRRTEKGTEVFVGGLPRSATESTLREIFSSCGEIIDARIMKDQSGHSKGYGFVRFAKR 69
Query: 62 SHKSLSKLFSTYNGCVWKGGRLRLERAKEH---YLARLKREWA-EDDAQLVNPPVTDSVA 117
+ + +K NG +G RL +E + + + L +EW E+ +L++ D V+
Sbjct: 70 DYANTAK--RQKNGIEVQGKRLVVELSMDQDTVFFGNLCKEWTLEEFEELIHKAFKDVVS 127
Query: 118 PDNKDATRLDTPKK 131
D A+ L + K
Sbjct: 128 VDLAMASNLGSSNK 141
>gi|164657987|ref|XP_001730119.1| hypothetical protein MGL_2501 [Malassezia globosa CBS 7966]
gi|159104014|gb|EDP42905.1| hypothetical protein MGL_2501 [Malassezia globosa CBS 7966]
Length = 664
Score = 45.8 bits (107), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 9/96 (9%)
Query: 1 MEKKEAEAEVEE----QTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIV---RTKGRSF 53
+ KK+ +A++EE T +YV L VT ++ K+F G++ + I K R F
Sbjct: 243 ISKKDRQAKIEEARAHYTNVYVKNLDPAVTQEEFEKLFEKYGKITSAAIATDQEGKSRGF 302
Query: 54 GYVDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERAK 89
G+V+F S H+ +K N + G +L L RA+
Sbjct: 303 GFVNF--SEHEQAAKAVEELNDTEFHGQKLFLGRAQ 336
>gi|67475272|ref|XP_653335.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56470277|gb|EAL47949.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
Length = 177
Score = 45.8 bits (107), Expect = 0.083, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Query: 4 KEAEAEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRT--KGRSFGYVDFFPS 61
KE ++ R++VGG+ + +T+ + + F + G+V ++ I+ K F YV+
Sbjct: 40 KENAIDLPLTKRLFVGGIDKSITEQQIKERFINYGKVLSIQIINKPWKDSLFAYVELKAK 99
Query: 62 SHKSLSKLFSTYNGCVWKGGRLRLERAKEHYLARLKRE 99
+ L + ST N WKG + R+E A + L + K+E
Sbjct: 100 NELLLHQCLSTLNMLTWKGLKFRVEYANPNILDKYKQE 137
>gi|291408201|ref|XP_002720429.1| PREDICTED: CG10466-like [Oryctolagus cuniculus]
Length = 431
Score = 45.8 bits (107), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 2/97 (2%)
Query: 2 EKKEAEAEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK--GRSFGYVDFF 59
EK +E ++ I++GGL ++T+ D+ VFS GEV +++VR K G+S G+
Sbjct: 126 EKVSWHSEYKDSAWIFLGGLPYELTEGDVICVFSQYGEVVNINLVRDKKTGKSKGFCFLC 185
Query: 60 PSSHKSLSKLFSTYNGCVWKGGRLRLERAKEHYLARL 96
+S +NG KG +R++ + + ++
Sbjct: 186 YEDQRSTILAVDNFNGIKIKGRTIRVDHVANYRVPKV 222
>gi|74189486|dbj|BAE22747.1| unnamed protein product [Mus musculus]
Length = 590
Score = 45.8 bits (107), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE+V D +L ++FS G+ +V ++R K + FG+
Sbjct: 105 RKEREAELGAKAKEFTNVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDSSGKSKGFGF 164
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 165 VSY--EKHEDANKAVEEMNGKEMSGKAIFVGRAQKKVERQAELKRKF 209
>gi|395853072|ref|XP_003799044.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Otolemur
garnettii]
Length = 633
Score = 45.8 bits (107), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE+V D+ L ++FS G+ +V ++R K + FG+
Sbjct: 176 RKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGF 235
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 236 VSY--EKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKF 280
>gi|338721952|ref|XP_003364452.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Equus
caballus]
Length = 631
Score = 45.8 bits (107), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE+V D+ L ++FS G+ +V ++R K + FG+
Sbjct: 176 RKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGF 235
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 236 VSY--EKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKF 280
>gi|148698436|gb|EDL30383.1| mCG5546, isoform CRA_b [Mus musculus]
Length = 580
Score = 45.8 bits (107), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE+V D +L ++FS G+ +V ++R K + FG+
Sbjct: 193 RKEREAELGAKAKEFTNVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDSSGKSKGFGF 252
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 253 VSY--EKHEDANKAVEEMNGKEMSGKAIFVGRAQKKVERQAELKRKF 297
>gi|46128087|ref|XP_388597.1| hypothetical protein FG08421.1 [Gibberella zeae PH-1]
Length = 784
Score = 45.8 bits (107), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 53/99 (53%), Gaps = 9/99 (9%)
Query: 1 MEKKEAEAEVEEQ----TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSF 53
+ KK+ +++ EE T +YV + VT+DD ++F G+V + + R K R F
Sbjct: 223 IPKKDRQSKFEEMKANFTNVYVKNIAADVTEDDFRQLFEKYGDVTSSSLARDQEGKSRGF 282
Query: 54 GYVDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERAKEHY 92
G+V+F ++H+S SK N + G L + RA++ +
Sbjct: 283 GFVNF--TTHESASKAVDELNNKDFHGQDLYVGRAQKKH 319
>gi|444706907|gb|ELW48224.1| Polyadenylate-binding protein 4 [Tupaia chinensis]
Length = 692
Score = 45.8 bits (107), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE+V D+ L ++FS G+ +V ++R K + FG+
Sbjct: 176 RKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPTGKSKGFGF 235
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 236 VSY--EKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKF 280
>gi|410263252|gb|JAA19592.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 631
Score = 45.8 bits (107), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE+V D+ L ++FS G+ +V ++R K + FG+
Sbjct: 176 RKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGF 235
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 236 VSY--EKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKF 280
>gi|407041643|gb|EKE40872.1| RNA recognition motif domain containing protein [Entamoeba nuttalli
P19]
Length = 177
Score = 45.8 bits (107), Expect = 0.091, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Query: 4 KEAEAEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRT--KGRSFGYVDFFPS 61
KE ++ R++VGG+ + +T+ + + F + G+V ++ I+ K F YV+
Sbjct: 40 KENVIDLPLTKRLFVGGIDKSITEQQIKERFINYGKVLSIQIINKPWKNSLFAYVELKAK 99
Query: 62 SHKSLSKLFSTYNGCVWKGGRLRLERAKEHYLARLKRE 99
+ L + ST N WKG + R+E A + L + K+E
Sbjct: 100 NELLLHQCLSTLNMLTWKGLKFRVEYANPNILDKYKQE 137
>gi|126324405|ref|XP_001377748.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Monodelphis
domestica]
Length = 171
Score = 45.8 bits (107), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 2 EKKEAEAEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK--GRSFGYVDFF 59
EK AE ++ ++VGGL ++T+ D+ VFS GE+ +++VR K G+S G+
Sbjct: 24 EKVSWHAEYKDSAWVFVGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLC 83
Query: 60 PSSHKSLSKLFSTYNGCVWKGGRLRLERAKEH 91
+S +NG +G +R++ +
Sbjct: 84 YEDQRSTILAVDNFNGIKIRGRTIRVDHVANY 115
>gi|410966844|ref|XP_003989937.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Felis catus]
Length = 631
Score = 45.8 bits (107), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE+V D+ L ++FS G+ +V ++R K + FG+
Sbjct: 176 RKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGF 235
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 236 VSY--EKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKF 280
>gi|402854031|ref|XP_003891684.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Papio anubis]
Length = 631
Score = 45.8 bits (107), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE+V D+ L ++FS G+ +V ++R K + FG+
Sbjct: 176 RKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGF 235
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 236 VSY--EKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKF 280
>gi|6900310|emb|CAB71338.1| putative Bci-5 protein [Hordeum vulgare subsp. vulgare]
Length = 76
Score = 45.8 bits (107), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 6/78 (7%)
Query: 15 RIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG----RSFGYVDFFPSSHKSLSKLF 70
++YVG L +KVT + L FS GEV + + R G + +G+V F SS + + +
Sbjct: 1 KVYVGNLAKKVTTEVLKNFFSEKGEVLSATVSRIPGTPKSKGYGFVTF--SSEEEVEAVV 58
Query: 71 STYNGCVWKGGRLRLERA 88
ST+N +G +R+ RA
Sbjct: 59 STFNNTELEGQTIRVNRA 76
>gi|208431836|ref|NP_001129126.1| polyadenylate-binding protein 4 isoform 3 [Homo sapiens]
gi|332808512|ref|XP_003308043.1| PREDICTED: polyadenylate-binding protein 4 [Pan troglodytes]
gi|395730718|ref|XP_003775778.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Pongo abelii]
gi|426329064|ref|XP_004025564.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Gorilla
gorilla gorilla]
gi|119627671|gb|EAX07266.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_f [Homo sapiens]
gi|410227602|gb|JAA11020.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 631
Score = 45.8 bits (107), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE+V D+ L ++FS G+ +V ++R K + FG+
Sbjct: 176 RKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGF 235
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 236 VSY--EKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKF 280
>gi|115478330|ref|NP_001062760.1| Os09g0279500 [Oryza sativa Japonica Group]
gi|49387841|dbj|BAD26506.1| putative plastid-specific ribosomal protein 2 precursor [Oryza
sativa Japonica Group]
gi|49388840|dbj|BAD26030.1| putative plastid-specific ribosomal protein 2 precursor [Oryza
sativa Japonica Group]
gi|113630993|dbj|BAF24674.1| Os09g0279500 [Oryza sativa Japonica Group]
gi|215695254|dbj|BAG90445.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737768|dbj|BAG96898.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222641205|gb|EEE69337.1| hypothetical protein OsJ_28655 [Oryza sativa Japonica Group]
Length = 245
Score = 45.8 bits (107), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 10 VEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKG----RSFGYVDFFPSSHKS 65
V+ Q ++YVG L + VT + L FS GEV + + R G + +G+V F SS +
Sbjct: 165 VDSQYKVYVGNLAKSVTTEMLKNFFSEKGEVLSATVSRIPGTAKSKGYGFVTF--SSEEE 222
Query: 66 LSKLFSTYNGCVWKGGRLRLERA 88
+ ST+N +G +R+ +A
Sbjct: 223 VQAAVSTFNNAELEGQPIRVNKA 245
>gi|344287655|ref|XP_003415568.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Loxodonta
africana]
Length = 631
Score = 45.8 bits (107), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE+V D+ L ++FS G+ +V ++R K + FG+
Sbjct: 176 RKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGF 235
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 236 VSY--EKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKF 280
>gi|444321552|ref|XP_004181432.1| hypothetical protein TBLA_0F03780 [Tetrapisispora blattae CBS 6284]
gi|387514476|emb|CCH61913.1| hypothetical protein TBLA_0F03780 [Tetrapisispora blattae CBS 6284]
Length = 577
Score = 45.8 bits (107), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 14 TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDI---VRTKGRSFGYVDFFPSSHKSLSKLF 70
T +YV L + T++D +F G + +V + K R FG+VDF +H+ K
Sbjct: 224 TNVYVKNLDLEATEEDFENLFKPYGTITSVALEKDAEGKSRGFGFVDF--ENHEDAVKAV 281
Query: 71 STYNGCVWKGGRLRLERAKEHY--LARLKREW 100
N +KG L + RA++ Y L LK+++
Sbjct: 282 EALNDTEYKGQTLYVGRAQKKYERLQELKKQY 313
>gi|320591142|gb|EFX03581.1| polyadenylate-binding protein [Grosmannia clavigera kw1407]
Length = 780
Score = 45.8 bits (107), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 10/100 (10%)
Query: 1 MEKKEAEAEVEEQ----TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR----TKGRS 52
+ KK+ +++ EE T IY+ L VTDD+ K+F G V + I R K R
Sbjct: 223 IPKKDRQSKFEEMKANYTNIYIKNLHADVTDDEFRKLFEQYGAVTSSTIARDQETGKSRG 282
Query: 53 FGYVDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERAKEHY 92
FG+++F ++H+S +K N G L + RA++ +
Sbjct: 283 FGFINF--TTHESAAKAVEELNSREIHGQELYVGRAQKKH 320
>gi|41388837|gb|AAH65540.1| PABPC4 protein [Homo sapiens]
Length = 631
Score = 45.8 bits (107), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE+V D+ L ++FS G+ +V ++R K + FG+
Sbjct: 176 RKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGF 235
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 236 VSY--EKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKF 280
>gi|395853068|ref|XP_003799042.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Otolemur
garnettii]
Length = 662
Score = 45.8 bits (107), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE+V D+ L ++FS G+ +V ++R K + FG+
Sbjct: 176 RKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGF 235
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 236 VSY--EKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKF 280
>gi|338721949|ref|XP_003364451.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Equus
caballus]
Length = 660
Score = 45.8 bits (107), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE+V D+ L ++FS G+ +V ++R K + FG+
Sbjct: 176 RKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGF 235
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 236 VSY--EKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKF 280
>gi|332248417|ref|XP_003273360.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Nomascus
leucogenys]
gi|383411099|gb|AFH28763.1| polyadenylate-binding protein 4 isoform 3 [Macaca mulatta]
gi|384941234|gb|AFI34222.1| polyadenylate-binding protein 4 isoform 3 [Macaca mulatta]
Length = 631
Score = 45.8 bits (107), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE+V D+ L ++FS G+ +V ++R K + FG+
Sbjct: 176 RKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGF 235
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 236 VSY--EKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKF 280
>gi|308503018|ref|XP_003113693.1| hypothetical protein CRE_26315 [Caenorhabditis remanei]
gi|308263652|gb|EFP07605.1| hypothetical protein CRE_26315 [Caenorhabditis remanei]
Length = 302
Score = 45.8 bits (107), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 13/128 (10%)
Query: 16 IYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK--GRSFGYVDFFPSSHKSLSKLFSTY 73
IY+GGL +T+ D+ VFS GEV ++++R K G+S G+ +S +
Sbjct: 40 IYIGGLSYALTEGDVIAVFSQYGEVMNINLIRDKETGKSKGFAFLCYKDQRSTVLAVDNF 99
Query: 74 NGCVWKGGRLRLERAKEHYLARL--------KREWAEDDAQLVNPPVTDSVAPDNKDATR 125
NG +R++ +E+ + + KR W E A P+ + P R
Sbjct: 100 NGISLHKRMIRVDHVEEYKVPKYKEDADDETKRLWEEGCAP---KPIMRTADPMEVQEKR 156
Query: 126 LDTPKKLL 133
++ K++L
Sbjct: 157 IEKAKEVL 164
>gi|403292062|ref|XP_003937076.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Saimiri
boliviensis boliviensis]
Length = 630
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE+V D+ L ++FS G+ +V ++R K + FG+
Sbjct: 176 RKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGF 235
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 236 VSY--EKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKF 280
>gi|149693775|ref|XP_001503500.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Equus
caballus]
Length = 644
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE+V D+ L ++FS G+ +V ++R K + FG+
Sbjct: 176 RKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGF 235
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 236 VSY--EKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKF 280
>gi|432865704|ref|XP_004070572.1| PREDICTED: embryonic polyadenylate-binding protein-like [Oryzias
latipes]
Length = 624
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 57/104 (54%), Gaps = 13/104 (12%)
Query: 3 KKEAEAE----VEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR-TKGRS--FGY 55
+KE E E V + T IY+ G+ +TD+ L + FS+ G+ +V ++R KGRS FG+
Sbjct: 176 RKEREVEFGTKVMKFTNIYIKNFGDNLTDEKLKEAFSAFGKTLSVRVMRDEKGRSRGFGF 235
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERAKEHYLARLKRE 99
V++ + H+ K NG G + + RA++ RL+R+
Sbjct: 236 VNY--AHHEDAQKAVDEMNGKEMNGKIIYVGRAQK----RLERQ 273
>gi|395853070|ref|XP_003799043.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Otolemur
garnettii]
Length = 646
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE+V D+ L ++FS G+ +V ++R K + FG+
Sbjct: 176 RKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGF 235
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 236 VSY--EKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKF 280
>gi|27734072|ref|NP_775552.1| RNA-binding motif protein, X-linked 2 [Mus musculus]
gi|61230302|sp|Q8R0F5.1|RBMX2_MOUSE RecName: Full=RNA-binding motif protein, X-linked 2
gi|20071694|gb|AAH26976.1| RNA binding motif protein, X-linked 2 [Mus musculus]
gi|26345092|dbj|BAC36195.1| unnamed protein product [Mus musculus]
gi|74207503|dbj|BAE40004.1| unnamed protein product [Mus musculus]
Length = 326
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 9/117 (7%)
Query: 16 IYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK--GRSFGYVDFFPSSHKSLSKLFSTY 73
I+VGGL ++T+ D+ VFS GE+ +++VR K G+S G+ +S +
Sbjct: 38 IFVGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNF 97
Query: 74 NGCVWKGGRLRLERAKEHYLAR-------LKREWAEDDAQLVNPPVTDSVAPDNKDA 123
NG KG +R++ + + + RE E + PP + +++DA
Sbjct: 98 NGIKIKGRTIRVDHVSNYRAPQESEDVDDVTRELQEKGCGVKTPPSSPPEVSEDEDA 154
>gi|410263248|gb|JAA19590.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
gi|410263254|gb|JAA19593.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 660
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE+V D+ L ++FS G+ +V ++R K + FG+
Sbjct: 176 RKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGF 235
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 236 VSY--EKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKF 280
>gi|351713677|gb|EHB16596.1| Polyadenylate-binding protein 4 [Heterocephalus glaber]
Length = 661
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE+V D+ L ++FS G+ +V ++R K + FG+
Sbjct: 176 RKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGF 235
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 236 VSY--EKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKF 280
>gi|344287651|ref|XP_003415566.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Loxodonta
africana]
Length = 644
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE+V D+ L ++FS G+ +V ++R K + FG+
Sbjct: 176 RKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGF 235
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 236 VSY--EKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKF 280
>gi|344287653|ref|XP_003415567.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Loxodonta
africana]
Length = 660
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE+V D+ L ++FS G+ +V ++R K + FG+
Sbjct: 176 RKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGF 235
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 236 VSY--EKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKF 280
>gi|119627670|gb|EAX07265.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_e [Homo sapiens]
Length = 615
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE+V D+ L ++FS G+ +V ++R K + FG+
Sbjct: 176 RKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGF 235
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 236 VSY--EKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKF 280
>gi|208431833|ref|NP_001129125.1| polyadenylate-binding protein 4 isoform 1 [Homo sapiens]
gi|332808508|ref|XP_513344.3| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Pan
troglodytes]
gi|395730714|ref|XP_002811047.2| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Pongo abelii]
gi|397488842|ref|XP_003815452.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Pan paniscus]
gi|426329062|ref|XP_004025563.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Gorilla
gorilla gorilla]
gi|66267552|gb|AAH94755.1| PABPC4 protein [Homo sapiens]
gi|119627668|gb|EAX07263.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_c [Homo sapiens]
gi|410227598|gb|JAA11018.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
gi|410227604|gb|JAA11021.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 660
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE+V D+ L ++FS G+ +V ++R K + FG+
Sbjct: 176 RKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGF 235
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 236 VSY--EKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKF 280
>gi|281344898|gb|EFB20482.1| hypothetical protein PANDA_020836 [Ailuropoda melanoleuca]
Length = 674
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE+V D+ L ++FS G+ +V ++R K + FG+
Sbjct: 189 RKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGF 248
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 249 VSY--EKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKF 293
>gi|410966842|ref|XP_003989936.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Felis catus]
Length = 644
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE+V D+ L ++FS G+ +V ++R K + FG+
Sbjct: 176 RKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGF 235
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 236 VSY--EKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKF 280
>gi|410966840|ref|XP_003989935.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Felis catus]
Length = 660
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE+V D+ L ++FS G+ +V ++R K + FG+
Sbjct: 176 RKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGF 235
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 236 VSY--EKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKF 280
>gi|410263250|gb|JAA19591.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 644
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE+V D+ L ++FS G+ +V ++R K + FG+
Sbjct: 176 RKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGF 235
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 236 VSY--EKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKF 280
>gi|355745175|gb|EHH49800.1| hypothetical protein EGM_00521 [Macaca fascicularis]
Length = 635
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE+V D+ L ++FS G+ +V ++R K + FG+
Sbjct: 151 RKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGF 210
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 211 VSY--EKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKF 255
>gi|332248413|ref|XP_003273358.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Nomascus
leucogenys]
gi|355557859|gb|EHH14639.1| hypothetical protein EGK_00600 [Macaca mulatta]
gi|383411103|gb|AFH28765.1| polyadenylate-binding protein 4 isoform 1 [Macaca mulatta]
gi|384941238|gb|AFI34224.1| polyadenylate-binding protein 4 isoform 1 [Macaca mulatta]
Length = 660
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE+V D+ L ++FS G+ +V ++R K + FG+
Sbjct: 176 RKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGF 235
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 236 VSY--EKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKF 280
>gi|402854027|ref|XP_003891682.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Papio anubis]
Length = 660
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE+V D+ L ++FS G+ +V ++R K + FG+
Sbjct: 176 RKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGF 235
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 236 VSY--EKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKF 280
>gi|48734702|gb|AAH71591.1| PABPC4 protein [Homo sapiens]
Length = 660
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE+V D+ L ++FS G+ +V ++R K + FG+
Sbjct: 176 RKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGF 235
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 236 VSY--EKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKF 280
>gi|4504715|ref|NP_003810.1| polyadenylate-binding protein 4 isoform 2 [Homo sapiens]
gi|332808510|ref|XP_003308042.1| PREDICTED: polyadenylate-binding protein 4 [Pan troglodytes]
gi|395730716|ref|XP_003775777.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Pongo abelii]
gi|397488844|ref|XP_003815453.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Pan paniscus]
gi|426329066|ref|XP_004025565.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Gorilla
gorilla gorilla]
gi|12229875|sp|Q13310.1|PABP4_HUMAN RecName: Full=Polyadenylate-binding protein 4; Short=PABP-4;
Short=Poly(A)-binding protein 4; AltName:
Full=Activated-platelet protein 1; Short=APP-1; AltName:
Full=Inducible poly(A)-binding protein; Short=iPABP
gi|1163177|gb|AAC50350.1| inducible poly(A)-binding protein [Homo sapiens]
gi|2801403|gb|AAB97309.1| polyadenylate binding protein [Homo sapiens]
gi|119627669|gb|EAX07264.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_d [Homo sapiens]
gi|410227600|gb|JAA11019.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
gi|1585757|prf||2201474A inducible poly(A)-binding protein
Length = 644
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE+V D+ L ++FS G+ +V ++R K + FG+
Sbjct: 176 RKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGF 235
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 236 VSY--EKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKF 280
>gi|332248415|ref|XP_003273359.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Nomascus
leucogenys]
gi|383411101|gb|AFH28764.1| polyadenylate-binding protein 4 isoform 2 [Macaca mulatta]
gi|384941236|gb|AFI34223.1| polyadenylate-binding protein 4 isoform 2 [Macaca mulatta]
Length = 644
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE+V D+ L ++FS G+ +V ++R K + FG+
Sbjct: 176 RKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGF 235
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 236 VSY--EKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKF 280
>gi|403292060|ref|XP_003937075.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 643
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE+V D+ L ++FS G+ +V ++R K + FG+
Sbjct: 176 RKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGF 235
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 236 VSY--EKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKF 280
>gi|402854029|ref|XP_003891683.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Papio anubis]
Length = 644
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE+V D+ L ++FS G+ +V ++R K + FG+
Sbjct: 176 RKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGF 235
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 236 VSY--EKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKF 280
>gi|375268714|ref|NP_001243518.1| RNA binding motif protein, X-linked 2 [Bos taurus]
gi|296471256|tpg|DAA13371.1| TPA: RNA binding motif protein, X-linked 2-like protein [Bos
taurus]
Length = 358
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 9/109 (8%)
Query: 16 IYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK--GRSFGYVDFFPSSHKSLSKLFSTY 73
I++GGL ++T+ D+ VFS GE+ +++VR K G+S G+ +S +
Sbjct: 58 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNF 117
Query: 74 NGCVWKGGRLRLERAKEHYLA-------RLKREWAEDDAQLVNPPVTDS 115
NG KG +R++ + L + RE E PP + S
Sbjct: 118 NGIKIKGRTIRVDHVSNYRLPEDSEEMDEVTRELQERGCGTHTPPPSSS 166
>gi|119627673|gb|EAX07268.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_h [Homo sapiens]
Length = 661
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE+V D+ L ++FS G+ +V ++R K + FG+
Sbjct: 176 RKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGF 235
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 236 VSY--EKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKF 280
>gi|113478077|ref|YP_724138.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
gi|110169125|gb|ABG53665.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
Length = 102
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 16 IYVGGLGEKVTDDDLAKVFSSLGEVKAVDIV--RTKG--RSFGYVDFFPSSHKSLSKLFS 71
IYVG L VT DDL++VF+ G VK V + R G R FG+V+ SS K
Sbjct: 3 IYVGNLSYDVTQDDLSEVFAEYGTVKRVQLPTDRETGRPRGFGFVEM--SSENEEQKAIE 60
Query: 72 TYNGCVWKGGRLRLERAK 89
+G W G +++ +AK
Sbjct: 61 ALDGAEWMGRDIKVNKAK 78
>gi|403292058|ref|XP_003937074.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 659
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE+V D+ L ++FS G+ +V ++R K + FG+
Sbjct: 176 RKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGF 235
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 236 VSY--EKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKF 280
>gi|388508598|gb|AFK42365.1| unknown [Medicago truncatula]
Length = 235
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Query: 10 VEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKGRS----FGYVDFFPSSHKS 65
V+ ++YVG L + VT D L K FS G + + R G S FG+V F SS +
Sbjct: 155 VDSPYKVYVGNLAKNVTSDSLKKFFSEKGNALSAKVSRAPGTSKSSGFGFVTF--SSDED 212
Query: 66 LSKLFSTYNGCVWKGGRLRLERA 88
+ S++N + +G ++R+ +
Sbjct: 213 VEAAISSFNNALLEGQKIRVNKG 235
>gi|432095458|gb|ELK26654.1| Polyadenylate-binding protein 4 [Myotis davidii]
Length = 657
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE+V D+ L ++FS G+ +V ++R K + FG+
Sbjct: 172 RKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPTGKSKGFGF 231
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 232 VSY--EKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKF 276
>gi|297816558|ref|XP_002876162.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297322000|gb|EFH52421.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 470
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 11/97 (11%)
Query: 16 IYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK----GRSFGYVDFFPSSHKSL-SKLF 70
+Y+GG+ T+ DL S+GEV V I+R K G+ + +V F +K L SK
Sbjct: 93 VYLGGIPTDATEGDLKGFCQSIGEVTEVRIMREKESGDGKGYAFVTF---RNKDLASKAI 149
Query: 71 STYNGCVWKGGRLRLE--RAKEH-YLARLKREWAEDD 104
T N ++G R++ +AK +L + R W E D
Sbjct: 150 DTLNSTEFRGKRIKCSTTQAKHRLFLGNVPRNWTESD 186
>gi|406867457|gb|EKD20495.1| 4 family polyadenylate binding protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 785
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 10/100 (10%)
Query: 1 MEKKEAEAEVEEQ----TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR----TKGRS 52
+ KK+ +++ EE T IYV + + TD++ ++F G+V + + R K R
Sbjct: 226 IPKKDRQSKFEEMKANFTNIYVKNIPVEATDEEFRELFEKFGDVTSASLARDTDSNKSRG 285
Query: 53 FGYVDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERAKEHY 92
FG+V+F +H+ +K NG +KG L + RA++ +
Sbjct: 286 FGFVNFI--NHEHAAKAVDELNGKDFKGQDLYVGRAQKKH 323
>gi|119627667|gb|EAX07262.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_b [Homo sapiens]
Length = 645
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE+V D+ L ++FS G+ +V ++R K + FG+
Sbjct: 176 RKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGF 235
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 236 VSY--EKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKF 280
>gi|73976763|ref|XP_857000.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Canis lupus
familiaris]
Length = 644
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE+V D+ L ++FS G+ +V ++R K + FG+
Sbjct: 176 RKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGF 235
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 236 VSY--EKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKF 280
>gi|449702263|gb|EMD42936.1| RNA recognition domain containing protein [Entamoeba histolytica
KU27]
Length = 177
Score = 45.4 bits (106), Expect = 0.12, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Query: 4 KEAEAEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRT--KGRSFGYVDFFPS 61
KE ++ R++VGG+ + +T+ + + F + G+V ++ I+ K F YV+
Sbjct: 40 KENVIDLPLTKRLFVGGIDKSITEQQIKERFINYGKVLSIQIINKPWKDSLFAYVELKAK 99
Query: 62 SHKSLSKLFSTYNGCVWKGGRLRLERAKEHYLARLKRE 99
+ L + ST N WKG + R+E A + L + K+E
Sbjct: 100 NELLLHQCLSTLNMLTWKGLKFRVEYANPNILDKYKQE 137
>gi|242060456|ref|XP_002451517.1| hypothetical protein SORBIDRAFT_04g003130 [Sorghum bicolor]
gi|241931348|gb|EES04493.1| hypothetical protein SORBIDRAFT_04g003130 [Sorghum bicolor]
Length = 569
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 67/159 (42%), Gaps = 39/159 (24%)
Query: 642 KGSSWFQKSPWTQLVNEDNS-SFSITQISPGITFKKHDVPKTQLGKEVANPNDKKSSKSV 700
KG SW QKS W LV S SFSI+Q+ P ++ P L V ++SSKS+
Sbjct: 421 KGYSWTQKSAWRDLVGGMGSTSFSISQVLP------NNNPAPALHLNVTE--SERSSKSL 472
Query: 701 GQAGSKPITCASTALEDGKKGEIVSQIIPEKNQPTDVGDNEASASMVADKHDL------- 753
E +Q+ E+ P+ +G + + H +
Sbjct: 473 ---------------------EATTQLSSEQRLPSSMGMLSTGTTDESTDHAIGGEPKES 511
Query: 754 -TPRQTTNVDG-TIGETCSFMRSAASIKEWSTAKAALSG 790
P++ V TI E C FMR+ S K+WS AK ++G
Sbjct: 512 NKPQKVRVVPKITISEVCPFMRNTESQKQWSKAKKVITG 550
Score = 40.0 bits (92), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 8/82 (9%)
Query: 386 HSWSQKMSWKALVGDKDSRAFSVSNILPSDASTEEADNGINSFEELNFDENESDDLMINV 445
+SW+QK +W+ LVG S +FS+S +LP +N LN E+E +
Sbjct: 423 YSWTQKSAWRDLVGGMGSTSFSISQVLP--------NNNPAPALHLNVTESERSSKSLEA 474
Query: 446 VSKKKPKMALSSSQKWETTSTT 467
++ + L SS +T TT
Sbjct: 475 TTQLSSEQRLPSSMGMLSTGTT 496
>gi|327299218|ref|XP_003234302.1| polyadenylate-binding protein [Trichophyton rubrum CBS 118892]
gi|326463196|gb|EGD88649.1| polyadenylate-binding protein [Trichophyton rubrum CBS 118892]
Length = 781
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 10/100 (10%)
Query: 1 MEKKEAEAEVEEQ----TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR----TKGRS 52
+ KK+ +++ EE T IYV + + VTD++ +F GE+ + + R K R
Sbjct: 222 IAKKDRQSKFEEMKANFTNIYVKNVEQDVTDEEFRGLFEKYGEITSATLSRDNETGKSRG 281
Query: 53 FGYVDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERAKEHY 92
FG+V+F S H++ S N KG +L + RA++ +
Sbjct: 282 FGFVNF--SDHEAASAAVEALNEYELKGQKLYVGRAQKKH 319
>gi|426258338|ref|XP_004022771.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Ovis aries]
Length = 461
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Query: 2 EKKEAEAEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK--GRSFGYVDFF 59
EK E ++ I++GGL ++T+ D+ VFS GE+ +++VR K G+S G+
Sbjct: 122 EKVSWHNEYKDSAWIFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLC 181
Query: 60 PSSHKSLSKLFSTYNGCVWKGGRLRLERAKEHYL 93
+S +NG KG +R++ + L
Sbjct: 182 YEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRL 215
>gi|402085655|gb|EJT80553.1| polyadenylate-binding protein [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 773
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 10/100 (10%)
Query: 1 MEKKEAEAEVEEQ----TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR----TKGRS 52
+ KK+ +++ EE T IYV + VTDDD +F G V + + R K R
Sbjct: 225 IPKKDRQSKFEEMKANFTNIYVKNIQLDVTDDDFRALFEKFGHVTSSSLARDQETGKSRG 284
Query: 53 FGYVDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERAKEHY 92
FG+V+F +SH+ SK N + G L + RA++ +
Sbjct: 285 FGFVNF--TSHEDASKAVEELNEKEFHGQNLYVGRAQKKH 322
>gi|17532167|ref|NP_495237.1| Protein C30B5.4 [Caenorhabditis elegans]
gi|351058643|emb|CCD66136.1| Protein C30B5.4 [Caenorhabditis elegans]
Length = 302
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 57/128 (44%), Gaps = 13/128 (10%)
Query: 16 IYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK--GRSFGYVDFFPSSHKSLSKLFSTY 73
IY+GGL +++ D+ VFS GEV ++++R K G+S G+ +S +
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTILAVDNF 99
Query: 74 NGCVWKGGRLRLERAKEHYLARL--------KREWAEDDAQLVNPPVTDSVAPDNKDATR 125
NG +R++ +E+ + + KR W E A PV AP R
Sbjct: 100 NGISLHKRMIRVDHVEEYKVPKYKEDADDETKRLWEEGCAP---KPVMREAAPMEVQEQR 156
Query: 126 LDTPKKLL 133
+ K++L
Sbjct: 157 IKKAKEVL 164
>gi|301790633|ref|XP_002930398.1| PREDICTED: polyadenylate-binding protein 4-like [Ailuropoda
melanoleuca]
Length = 644
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE+V D+ L ++FS G+ +V ++R K + FG+
Sbjct: 176 RKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGF 235
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 236 VSY--EKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKF 280
>gi|302658195|ref|XP_003020804.1| hypothetical protein TRV_05080 [Trichophyton verrucosum HKI 0517]
gi|291184669|gb|EFE40186.1| hypothetical protein TRV_05080 [Trichophyton verrucosum HKI 0517]
Length = 816
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 10/100 (10%)
Query: 1 MEKKEAEAEVEEQ----TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR----TKGRS 52
+ KK+ +++ EE T IYV + + VTD++ +F GE+ + + R K R
Sbjct: 238 IAKKDRQSKFEEMKANFTNIYVKNVEQDVTDEEFRGLFEKYGEITSATLSRDNETGKSRG 297
Query: 53 FGYVDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERAKEHY 92
FG+V+F S H++ S N KG +L + RA++ +
Sbjct: 298 FGFVNF--SDHEAASAAVEALNEYELKGQKLYVGRAQKKH 335
>gi|326478130|gb|EGE02140.1| polyadenylate-binding protein [Trichophyton equinum CBS 127.97]
Length = 782
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 10/100 (10%)
Query: 1 MEKKEAEAEVEEQ----TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR----TKGRS 52
+ KK+ +++ EE T IYV + + VTD++ +F GE+ + + R K R
Sbjct: 222 IAKKDRQSKFEEMKANFTNIYVKNVEQDVTDEEFRGLFEKYGEITSATLSRDNETGKSRG 281
Query: 53 FGYVDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERAKEHY 92
FG+V+F S H++ S N KG +L + RA++ +
Sbjct: 282 FGFVNF--SDHEAASAAVEALNEYELKGQKLYVGRAQKKH 319
>gi|431908562|gb|ELK12156.1| RNA-binding motif protein, X-linked 2 [Pteropus alecto]
Length = 346
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 8 AEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK--GRSFGYVDFFPSSHKS 65
+E ++ I++GGL ++T+ D+ VFS GE+ +++VR K G+S G+ +S
Sbjct: 50 SEYKDSAWIFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRS 109
Query: 66 LSKLFSTYNGCVWKGGRLRLE 86
+NG KG +R++
Sbjct: 110 TILAVDNFNGIKIKGRTIRVD 130
>gi|241648488|ref|XP_002410067.1| alternative splicing factor SRp20/9G8, putative [Ixodes scapularis]
gi|215501503|gb|EEC10997.1| alternative splicing factor SRp20/9G8, putative [Ixodes scapularis]
Length = 241
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 9 EVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKGRSFGYVDFFPSSHKSLSK 68
E + QTR++VGGLG+ + ++L + FS G + V + + F +V+F + ++
Sbjct: 72 ERKPQTRVFVGGLGDNMAKEELEREFSKYGHLSQVWVAQNP-PGFAFVEF--DDDRDANE 128
Query: 69 LFSTYNGCVWKGGRLRLERAKE 90
NG V G +LR+E ++E
Sbjct: 129 AIRQMNGFVLNGCKLRVEHSRE 150
>gi|182888560|ref|NP_001107258.2| RNA-binding motif protein, X-linked 2 [Rattus norvegicus]
gi|374253659|sp|B0BN49.1|RBMX2_RAT RecName: Full=RNA-binding motif protein, X-linked 2
gi|165970686|gb|AAI58685.1| Rbmx2 protein [Rattus norvegicus]
Length = 328
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 60/131 (45%), Gaps = 9/131 (6%)
Query: 2 EKKEAEAEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK--GRSFGYVDFF 59
EK +E ++ I++GGL ++T+ D+ VFS GE+ +++VR K G+S G+
Sbjct: 24 EKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLC 83
Query: 60 PSSHKSLSKLFSTYNGCVWKGGRLRLERAKEHYLAR-------LKREWAEDDAQLVNPPV 112
+S +NG KG +R++ + + + RE E PP
Sbjct: 84 YEDQRSTVLAVDNFNGIKIKGRTIRVDHVANYRAPQESEDVDDVTRELQEKGCGAKTPPS 143
Query: 113 TDSVAPDNKDA 123
+ +++DA
Sbjct: 144 SPPEVSEDEDA 154
>gi|326474523|gb|EGD98532.1| polyadenylate-binding protein [Trichophyton tonsurans CBS 112818]
Length = 676
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 10/100 (10%)
Query: 1 MEKKEAEAEVEEQ----TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR----TKGRS 52
+ KK+ +++ EE T IYV + + VTD++ +F GE+ + + R K R
Sbjct: 222 IAKKDRQSKFEEMKANFTNIYVKNVEQDVTDEEFRGLFEKYGEITSATLSRDNETGKSRG 281
Query: 53 FGYVDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERAKEHY 92
FG+V+F S H++ S N KG +L + RA++ +
Sbjct: 282 FGFVNF--SDHEAASAAVEALNEYELKGQKLYVGRAQKKH 319
>gi|116202083|ref|XP_001226853.1| hypothetical protein CHGG_08926 [Chaetomium globosum CBS 148.51]
gi|121932498|sp|Q2GSX8.1|PABP_CHAGB RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|88177444|gb|EAQ84912.1| hypothetical protein CHGG_08926 [Chaetomium globosum CBS 148.51]
Length = 783
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 54/99 (54%), Gaps = 9/99 (9%)
Query: 1 MEKKEAEAEVEEQ----TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSF 53
+ KK+ +++ EE T IYV + + TD++ +F+ G+V + + R K R F
Sbjct: 229 IPKKDRQSKFEEMKANFTNIYVKNISLEATDEEFRDLFAKYGDVTSSSLARDSEGKSRGF 288
Query: 54 GYVDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERAKEHY 92
G+V+F ++H+ +K NG ++G L + RA++ +
Sbjct: 289 GFVNF--TTHECAAKAVEELNGKEFRGQDLYVGRAQKKH 325
>gi|432093575|gb|ELK25559.1| RNA-binding motif protein, X-linked 2 [Myotis davidii]
Length = 337
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 8 AEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK--GRSFGYVDFFPSSHKS 65
+E ++ I++GGL ++T+ D+ VFS GE+ +++VR K G+S G+ +S
Sbjct: 30 SEYKDSAWIFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRS 89
Query: 66 LSKLFSTYNGCVWKGGRLRLERA 88
+NG KG +R++
Sbjct: 90 TILAVDNFNGIKIKGRTIRVDHV 112
>gi|395835423|ref|XP_003790679.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Otolemur
garnettii]
Length = 331
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 8 AEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK--GRSFGYVDFFPSSHKS 65
+E ++ I++GGL ++T+ D+ VFS GE+ +++VR K G+S G+ +S
Sbjct: 30 SEYKDSAWIFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRS 89
Query: 66 LSKLFSTYNGCVWKGGRLRLE 86
+NG KG +R++
Sbjct: 90 TILAVDNFNGIKIKGRTIRVD 110
>gi|358387438|gb|EHK25033.1| hypothetical protein TRIVIDRAFT_54648 [Trichoderma virens Gv29-8]
Length = 1024
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 3 KKEAEAEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRT---KGRSFGYVDF 58
KK E V E ++V GL T+D++ ++FS G + +++ R KGR F +VDF
Sbjct: 747 KKSREGAVAEGREVHVSGLSPSATEDEIREIFSKYGTISRINVPRNISGKGRGFAFVDF 805
>gi|225442420|ref|XP_002277538.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
nuclear-like [Vitis vinifera]
Length = 630
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 2 EKKEAEAEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGYVDF 58
E+KEA E + T +YV LGE +T+D + FS G+V V I++ K R FG+V+F
Sbjct: 196 ERKEASEETKF-TNVYVKNLGEDLTEDIIRDKFSEFGKVGTVVIMKDGNGKSRGFGFVNF 254
Query: 59 FPSSHKSLSKLFSTYNGCVWKGGRLRLERAKE 90
S K NG + +L + RA++
Sbjct: 255 --ESPDEAKKAVEALNGAMLGSKKLFVGRAQK 284
Score = 40.0 bits (92), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 11 EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK---GRSFGYVDFFPSSHKSLS 67
E+ + +YV L V DD L + FSS G++ + ++R + FG+V F S+ +
Sbjct: 306 EKASNLYVKNLDASVDDDKLQEHFSSCGQITSAKVMRHDSGLSKGFGFVCF--STSEEAQ 363
Query: 68 KLFSTYNGCVWKGGRLRLERAK 89
K +T NG + G L + A+
Sbjct: 364 KALTTLNGTLLHGRSLYIAMAQ 385
>gi|378756066|gb|EHY66091.1| hypothetical protein NERG_00787 [Nematocida sp. 1 ERTm2]
Length = 513
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Query: 2 EKKEAEAEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR-----TKGRSFGYV 56
+K++ E ++ Q IYVG + T+ DL ++FS +G++ V I R K + + YV
Sbjct: 7 QKEKKEGQIGRQNSIYVGDIPTSTTESDLFQIFSKVGQIYTVIIPRKELSIVKDKCYAYV 66
Query: 57 DFFPSSHKSLSKLFSTYNGCVWKGGRLRL 85
FF + S+ T+N G ++R+
Sbjct: 67 TFFDEA--SVPTAIETFNFYELNGSQIRV 93
>gi|344286268|ref|XP_003414881.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Loxodonta
africana]
Length = 401
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 8 AEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK--GRSFGYVDFFPSSHKS 65
+E ++ +++GGL ++T+ D+ VFS GEV +++VR K G+S G+ +S
Sbjct: 104 SEYKDSAWVFLGGLPYELTEGDIICVFSQYGEVVNINLVRDKKTGKSKGFCFLCYEDQRS 163
Query: 66 LSKLFSTYNGCVWKGGRLRLE 86
+NG KG +R++
Sbjct: 164 TVLAVDNFNGIKIKGRTIRVD 184
>gi|395545903|ref|XP_003775408.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding motif protein,
X-linked 2 [Sarcophilus harrisii]
Length = 310
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 6 AEAEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK--GRSFGYVDFFPSSH 63
+E E E +++GGL ++T+ D+ VFS GE+ +++VR K G+S G+
Sbjct: 9 SEGEYRENXWVFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQ 68
Query: 64 KSLSKLFSTYNGCVWKGGRLRLE 86
+S +NG +G +R++
Sbjct: 69 RSTILAVDNFNGIKIRGRTIRVD 91
>gi|366987097|ref|XP_003673315.1| hypothetical protein NCAS_0A03680 [Naumovozyma castellii CBS 4309]
gi|342299178|emb|CCC66926.1| hypothetical protein NCAS_0A03680 [Naumovozyma castellii CBS 4309]
Length = 575
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 59/109 (54%), Gaps = 11/109 (10%)
Query: 1 MEKKEAEAEVEEQ----TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRT---KGRSF 53
+ +KE ++++EE T +YV + + TD++ ++F+ G V + + +T K + F
Sbjct: 199 LTRKERDSQLEETKAHFTNVYVKNINLETTDEEFNELFAKYGNVLSSSLEKTEDGKLKGF 258
Query: 54 GYVDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERAKEHY--LARLKREW 100
G+VDF H+ +K NG +K L + RA++ Y + LK+++
Sbjct: 259 GFVDF--EKHEDAAKAVEELNGTEFKDQTLFVSRAQKKYERMQELKKQY 305
>gi|302500992|ref|XP_003012489.1| hypothetical protein ARB_01449 [Arthroderma benhamiae CBS 112371]
gi|291176047|gb|EFE31849.1| hypothetical protein ARB_01449 [Arthroderma benhamiae CBS 112371]
Length = 801
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 10/100 (10%)
Query: 1 MEKKEAEAEVEEQ----TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR----TKGRS 52
+ KK+ +++ EE T IYV + + VTD++ +F GE+ + + R K R
Sbjct: 222 IAKKDRQSKFEEMKANFTNIYVKNVEQDVTDEEFRGLFEKYGEITSATLSRDNETGKSRG 281
Query: 53 FGYVDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERAKEHY 92
FG+V+F S H++ S N KG +L + RA++ +
Sbjct: 282 FGFVNF--SDHEAASAAVEALNEYELKGQKLYVGRAQKKH 319
>gi|71032247|ref|XP_765765.1| hypothetical protein [Theileria parva strain Muguga]
gi|68352722|gb|EAN33482.1| RNA-binding protein, putative [Theileria parva]
Length = 310
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 16 IYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK--GRSFGYVDFFPSSHKSLSKLFSTY 73
I++GGL ++T+ D+ VFS GE +++ R K G+S GY +S +
Sbjct: 41 IFIGGLDHRMTEGDIIIVFSQFGEPIDINLKRDKDTGKSLGYCFLGYKDQRSTILAVDNF 100
Query: 74 NGCVWKGGRLRLERAKEH 91
NG G R+R++ ++
Sbjct: 101 NGSTLLGRRIRVDHVMDY 118
>gi|149745621|ref|XP_001500162.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Equus
caballus]
Length = 327
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 8 AEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK--GRSFGYVDFFPSSHKS 65
+E ++ I++GGL ++T+ D+ VFS GE+ +++VR K G+S G+ +S
Sbjct: 30 SEYKDSAWIFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRS 89
Query: 66 LSKLFSTYNGCVWKGGRLRLE 86
+NG KG +R++
Sbjct: 90 TILAVDNFNGIKIKGRTIRVD 110
>gi|380793569|gb|AFE68660.1| polyadenylate-binding protein 4 isoform 3, partial [Macaca mulatta]
Length = 485
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE+V D+ L ++FS G+ +V ++R K + FG+
Sbjct: 176 RKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGF 235
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 236 VSY--EKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKF 280
>gi|315052346|ref|XP_003175547.1| hypothetical protein MGYG_03072 [Arthroderma gypseum CBS 118893]
gi|311340862|gb|EFR00065.1| hypothetical protein MGYG_03072 [Arthroderma gypseum CBS 118893]
Length = 782
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 10/100 (10%)
Query: 1 MEKKEAEAEVEEQ----TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR----TKGRS 52
+ KK+ +++ EE T IYV + + VTD++ +F GE+ + + R K R
Sbjct: 222 IAKKDRQSKFEEMKANFTNIYVKNVEQDVTDEEFRSLFEKYGEITSATLSRDNETGKSRG 281
Query: 53 FGYVDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERAKEHY 92
FG+V+F S H++ S N KG +L + RA++ +
Sbjct: 282 FGFVNF--SDHEAASAAVEGLNEYELKGQKLYVGRAQKKH 319
>gi|296236404|ref|XP_002763305.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Callithrix
jacchus]
Length = 342
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 8 AEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK--GRSFGYVDFFPSSHKS 65
+E ++ I++GGL ++T+ D+ VFS GE+ +++VR K G+S G+ +S
Sbjct: 50 SEYKDSAWIFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRS 109
Query: 66 LSKLFSTYNGCVWKGGRLRLE 86
+NG KG +R++
Sbjct: 110 TILAVDNFNGIKIKGRTIRVD 130
>gi|388453455|ref|NP_001253777.1| RNA-binding motif protein, X-linked 2 [Macaca mulatta]
gi|380813648|gb|AFE78698.1| RNA-binding motif protein, X-linked 2 [Macaca mulatta]
gi|383419077|gb|AFH32752.1| RNA-binding motif protein, X-linked 2 [Macaca mulatta]
gi|384947606|gb|AFI37408.1| RNA-binding motif protein, X-linked 2 [Macaca mulatta]
Length = 322
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 8 AEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK--GRSFGYVDFFPSSHKS 65
+E ++ I++GGL ++T+ D+ VFS GE+ +++VR K G+S G+ +S
Sbjct: 30 SEYKDSAWIFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRS 89
Query: 66 LSKLFSTYNGCVWKGGRLRLE 86
+NG KG +R++
Sbjct: 90 TILAVDNFNGIKIKGRTIRVD 110
>gi|403279255|ref|XP_003931175.1| PREDICTED: RNA-binding motif protein, X-linked 2 [Saimiri
boliviensis boliviensis]
Length = 342
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 8 AEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK--GRSFGYVDFFPSSHKS 65
+E ++ I++GGL ++T+ D+ VFS GE+ +++VR K G+S G+ +S
Sbjct: 50 SEYKDSAWIFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRS 109
Query: 66 LSKLFSTYNGCVWKGGRLRLE 86
+NG KG +R++
Sbjct: 110 TILAVDNFNGIKIKGRTIRVD 130
>gi|301766430|ref|XP_002918652.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Ailuropoda
melanoleuca]
Length = 325
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 8 AEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK--GRSFGYVDFFPSSHKS 65
+E ++ I++GGL ++T+ D+ VFS GE+ +++VR K G+S G+ +S
Sbjct: 30 SEYKDSAWIFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRS 89
Query: 66 LSKLFSTYNGCVWKGGRLRLE 86
+NG KG +R++
Sbjct: 90 TILAVDNFNGIKIKGRTIRVD 110
>gi|402911397|ref|XP_003919621.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding motif protein, X-linked
2 [Papio anubis]
Length = 322
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 8 AEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK--GRSFGYVDFFPSSHKS 65
+E ++ I++GGL ++T+ D+ VFS GE+ +++VR K G+S G+ +S
Sbjct: 30 SEYKDSAWIFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRS 89
Query: 66 LSKLFSTYNGCVWKGGRLRLE 86
+NG KG +R++
Sbjct: 90 TILAVDNFNGIKIKGRTIRVD 110
>gi|396492663|ref|XP_003843853.1| hypothetical protein LEMA_P015040.1 [Leptosphaeria maculans JN3]
gi|312220433|emb|CBY00374.1| hypothetical protein LEMA_P015040.1 [Leptosphaeria maculans JN3]
Length = 747
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 3 KKEAEAEVEEQ----TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
KKE ++ EE T IYV + VTDD+ +F G++ + I R K R FG+
Sbjct: 213 KKERMSKFEEMKANFTNIYVKNIDLDVTDDEFRDLFEKHGDITSASIARDDQGKSRGFGF 272
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERAKEHY 92
V++ H++ S T N + G +L + RA++ +
Sbjct: 273 VNYI--KHEAASVAVETLNDTEFHGQKLYVGRAQKKH 307
>gi|343887401|ref|NP_001230600.1| RNA binding motif protein, X-linked 2 [Sus scrofa]
Length = 329
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 2 EKKEAEAEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK--GRSFGYVDFF 59
EK +E ++ I++GGL ++T+ D+ VFS GE+ +++VR K G+S G+
Sbjct: 24 EKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLC 83
Query: 60 PSSHKSLSKLFSTYNGCVWKGGRLRLE 86
+S +NG KG +R++
Sbjct: 84 YEDQRSTVLAVDNFNGIKIKGRTIRVD 110
>gi|13540314|gb|AAK29408.1|AF338225_1 embryonic poly(A) binding protein [Xenopus laevis]
Length = 629
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 56/110 (50%), Gaps = 7/110 (6%)
Query: 5 EAEAEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGYVDFFPS 61
E A+V E T +Y+ GE + D L ++FS+ G +V ++ + R FG+V++
Sbjct: 182 EYGAKVMEFTNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDDSGRSRGFGFVNY--G 239
Query: 62 SHKSLSKLFSTYNGCVWKGGRLRLERAKEHY--LARLKREWAEDDAQLVN 109
+H+ K S NG G + + RA++ + LKR++ + + +N
Sbjct: 240 NHEEAQKAVSEMNGKEVNGRMIYVGRAQKRIERQSELKRKFEQIKQERIN 289
>gi|47221432|emb|CAF97350.1| unnamed protein product [Tetraodon nigroviridis]
Length = 180
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 8 AEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK--GRSFGYVDFFPSSHKS 65
+E ++ +++GG ++++ D+ VFS GE+ +++VR K G+S G+ +S
Sbjct: 29 SEYKDSAWVFIGGFPYELSEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRS 88
Query: 66 LSKLFSTYNGCVWKGGRLRLERAKEH 91
+NG KG LR++ K++
Sbjct: 89 TILAVDNFNGIKIKGRTLRVDHVKDY 114
>gi|291399204|ref|XP_002715240.1| PREDICTED: poly A binding protein, cytoplasmic 4-like [Oryctolagus
cuniculus]
Length = 644
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE+V D+ L +FS G+ +V ++R K + FG+
Sbjct: 176 RKEREAELGAKAKEFTNVYIKNFGEEVDDESLKDLFSQFGKTLSVKVMRDPSGKSKGFGF 235
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 236 VSY--EKHEDANKAVEEMNGKEIGGKVIFVGRAQKKVERQAELKRKF 280
>gi|224062834|ref|XP_002300896.1| predicted protein [Populus trichocarpa]
gi|222842622|gb|EEE80169.1| predicted protein [Populus trichocarpa]
Length = 648
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 9/96 (9%)
Query: 14 TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGYVDFFP--SSHKSLSK 68
T +YV L E +D+DL K+FSS G + + +++ K R FG+V+F S+ ++ K
Sbjct: 212 TNVYVKNLSETTSDEDLKKIFSSYGAITSAIVMKDQNGKSRGFGFVNFQSPDSAAAAVEK 271
Query: 69 LFS-TYNGCVWKGGRLRLERAKEHYLARLKREWAED 103
L T++ VW GR + + +E A LK ++ ++
Sbjct: 272 LNGMTFSDKVWYVGRAQRKGERE---AELKAKFEQE 304
>gi|281351269|gb|EFB26853.1| hypothetical protein PANDA_007127 [Ailuropoda melanoleuca]
Length = 334
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 8 AEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK--GRSFGYVDFFPSSHKS 65
+E ++ I++GGL ++T+ D+ VFS GE+ +++VR K G+S G+ +S
Sbjct: 39 SEYKDSAWIFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRS 98
Query: 66 LSKLFSTYNGCVWKGGRLRLE 86
+NG KG +R++
Sbjct: 99 TILAVDNFNGIKIKGRTIRVD 119
>gi|413915907|gb|AFW55839.1| hypothetical protein ZEAMMB73_482663 [Zea mays]
gi|413915908|gb|AFW55840.1| hypothetical protein ZEAMMB73_482663 [Zea mays]
Length = 492
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 53/106 (50%), Gaps = 9/106 (8%)
Query: 14 TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKGRSFGYVDFFPSSHKSLSKLFSTY 73
+ +YVGG+ V+ DDL K+ S+GEV V + GR + +V+F + + SK
Sbjct: 96 SEVYVGGIASDVSSDDLKKLCESVGEVVEVRMPGKSGRLYAFVNF--RTKELASKAIQKL 153
Query: 74 NGCVWKGGRLRLERAKEH---YLARLKREWAEDD----AQLVNPPV 112
N KG ++R+ ++ ++ + W E++ A+ V P V
Sbjct: 154 NNKDLKGKKIRVSSSQAKNRLFIGNIPYNWTENEFKKAAEEVGPGV 199
>gi|345807592|ref|XP_549256.3| PREDICTED: RNA-binding motif protein, X-linked 2 [Canis lupus
familiaris]
Length = 336
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 8 AEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK--GRSFGYVDFFPSSHKS 65
+E ++ I++GGL ++T+ D+ VFS GE+ +++VR K G+S G+ +S
Sbjct: 30 SEYKDSAWIFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRS 89
Query: 66 LSKLFSTYNGCVWKGGRLRLE 86
+NG KG +R++
Sbjct: 90 TILAVDNFNGIKIKGRTIRVD 110
>gi|355757697|gb|EHH61222.1| RNA-binding motif protein, X-linked 2 [Macaca fascicularis]
Length = 334
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 8 AEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK--GRSFGYVDFFPSSHKS 65
+E ++ I++GGL ++T+ D+ VFS GE+ +++VR K G+S G+ +S
Sbjct: 42 SEYKDSAWIFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRS 101
Query: 66 LSKLFSTYNGCVWKGGRLRLE 86
+NG KG +R++
Sbjct: 102 TILAVDNFNGIKIKGRTIRVD 122
>gi|332226384|ref|XP_003262369.1| PREDICTED: RNA-binding motif protein, X-linked 2 [Nomascus
leucogenys]
Length = 322
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 8 AEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK--GRSFGYVDFFPSSHKS 65
+E ++ I++GGL ++T+ D+ VFS GE+ +++VR K G+S G+ +S
Sbjct: 30 SEYKDSAWIFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRS 89
Query: 66 LSKLFSTYNGCVWKGGRLRLE 86
+NG KG +R++
Sbjct: 90 TILAVDNFNGIKIKGRTIRVD 110
>gi|389629168|ref|XP_003712237.1| polyadenylate-binding protein [Magnaporthe oryzae 70-15]
gi|158514092|sp|A4QUF0.1|PABP_MAGO7 RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|351644569|gb|EHA52430.1| polyadenylate-binding protein [Magnaporthe oryzae 70-15]
gi|440469069|gb|ELQ38192.1| polyadenylate-binding protein [Magnaporthe oryzae Y34]
gi|440487573|gb|ELQ67355.1| polyadenylate-binding protein [Magnaporthe oryzae P131]
Length = 762
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Query: 14 TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR----TKGRSFGYVDFFPSSHKSLSKL 69
T IYV + +VTDD+ +F G+V + + R K R FG+V+F +SH+ SK
Sbjct: 242 TNIYVKNINPEVTDDEFRTLFEKYGDVTSSSLARDQETGKSRGFGFVNF--TSHEDASKA 299
Query: 70 FSTYNGCVWKGGRLRLERAKEHY 92
N + G L + RA++ +
Sbjct: 300 VQELNEKEFHGQNLYVGRAQKKH 322
>gi|410212532|gb|JAA03485.1| RNA binding motif protein, X-linked 2 [Pan troglodytes]
gi|410251714|gb|JAA13824.1| RNA binding motif protein, X-linked 2 [Pan troglodytes]
gi|410308778|gb|JAA32989.1| RNA binding motif protein, X-linked 2 [Pan troglodytes]
gi|410333627|gb|JAA35760.1| RNA binding motif protein, X-linked 2 [Pan troglodytes]
Length = 322
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 8 AEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK--GRSFGYVDFFPSSHKS 65
+E ++ I++GGL ++T+ D+ VFS GE+ +++VR K G+S G+ +S
Sbjct: 30 SEYKDSAWIFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRS 89
Query: 66 LSKLFSTYNGCVWKGGRLRLE 86
+NG KG +R++
Sbjct: 90 TILAVDNFNGIKIKGRTIRVD 110
>gi|355705153|gb|EHH31078.1| RNA-binding motif protein, X-linked 2, partial [Macaca mulatta]
Length = 321
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 8 AEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK--GRSFGYVDFFPSSHKS 65
+E ++ I++GGL ++T+ D+ VFS GE+ +++VR K G+S G+ +S
Sbjct: 29 SEYKDSAWIFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRS 88
Query: 66 LSKLFSTYNGCVWKGGRLRLE 86
+NG KG +R++
Sbjct: 89 TILAVDNFNGIKIKGRTIRVD 109
>gi|400597582|gb|EJP65312.1| polyadenylate-binding protein [Beauveria bassiana ARSEF 2860]
Length = 736
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 9/99 (9%)
Query: 1 MEKKEAEAEVEEQ----TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSF 53
+ KK+ +++ EE T +YV + +VTDD+ ++F G+V + I R K R F
Sbjct: 219 IPKKDRQSKFEEMKANFTNVYVKNISPEVTDDEFRELFERHGDVTSSSIAREQDGKSRGF 278
Query: 54 GYVDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERAKEHY 92
G+V+F ++H++ +K N G L + RA++ +
Sbjct: 279 GFVNF--TTHEAAAKAVEELNNKDLHGQELYVGRAQKKH 315
>gi|432881580|ref|XP_004073850.1| PREDICTED: polyadenylate-binding protein 1-like [Oryzias latipes]
Length = 631
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK---GRSFGY 55
+KE EAE+ E T +Y+ GE + D+ L ++FS G +V ++ + GR FG+
Sbjct: 176 RKEREAELGARAREFTNVYIKNFGEDMDDEKLKEIFSKFGNATSVRVMTDESGGGRGFGF 235
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERAKE 90
V F +H+ K NG G + + RA++
Sbjct: 236 VSF--ENHEDAQKAVDEMNGKELNGRIMFVGRAQK 268
>gi|348552954|ref|XP_003462292.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Cavia
porcellus]
Length = 388
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 2 EKKEAEAEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK--GRSFGYVDFF 59
EK +E ++ I++GGL ++T+ D+ VFS GE+ +++VR K G+S G+
Sbjct: 76 EKVSWHSEYKDSAWIFLGGLPYELTEGDVICVFSQYGEIVNINLVRDKKTGKSKGFCFLC 135
Query: 60 PSSHKSLSKLFSTYNGCVWKGGRLRLE 86
+S +NG KG +R++
Sbjct: 136 YEDQRSTILAVDNFNGIKIKGRTIRVD 162
>gi|408395605|gb|EKJ74783.1| hypothetical protein FPSE_05031 [Fusarium pseudograminearum CS3096]
Length = 749
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 9/99 (9%)
Query: 1 MEKKEAEAEVEEQ----TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSF 53
+ KK+ +++ EE T +YV + VT+DD ++F G+V + + R K R F
Sbjct: 223 IPKKDRQSKFEEMKANFTNVYVKNIAADVTEDDFRQLFEKYGDVTSSSLARDQEGKSRGF 282
Query: 54 GYVDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERAKEHY 92
G+V+F ++H+S K N + G L + RA++ +
Sbjct: 283 GFVNF--TTHESAFKAVDELNNKDFHGQDLYVGRAQKKH 319
>gi|118600973|ref|NP_057108.2| RNA-binding motif protein, X-linked 2 [Homo sapiens]
gi|62512110|sp|Q9Y388.2|RBMX2_HUMAN RecName: Full=RNA-binding motif protein, X-linked 2
gi|4938275|emb|CAB43745.1| hypothetical protein [Homo sapiens]
gi|62020769|gb|AAH33750.1| RNA binding motif protein, X-linked 2 [Homo sapiens]
gi|119632205|gb|EAX11800.1| RNA binding motif protein, X-linked 2, isoform CRA_b [Homo sapiens]
gi|158259171|dbj|BAF85544.1| unnamed protein product [Homo sapiens]
Length = 322
Score = 44.3 bits (103), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 8 AEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK--GRSFGYVDFFPSSHKS 65
+E ++ I++GGL ++T+ D+ VFS GE+ +++VR K G+S G+ +S
Sbjct: 30 SEYKDSAWIFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRS 89
Query: 66 LSKLFSTYNGCVWKGGRLRLE 86
+NG KG +R++
Sbjct: 90 TILAVDNFNGIKIKGRTIRVD 110
>gi|322698722|gb|EFY90490.1| poly(A) RNA binding protein [Metarhizium acridum CQMa 102]
Length = 742
Score = 44.3 bits (103), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 55/99 (55%), Gaps = 9/99 (9%)
Query: 1 MEKKEAEAEVEEQ----TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSF 53
+ KK+ +++ EE T IYV + + +DD+ ++F G++ + + R K R F
Sbjct: 224 IPKKDRQSKFEEMKANFTNIYVKNISTEASDDEFRELFEKYGDITSSSLARDQEGKSRGF 283
Query: 54 GYVDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERAKEHY 92
G+V+F ++H+S +K +G ++G L + RA++ +
Sbjct: 284 GFVNF--TTHESAAKAVEELHGKDFRGQDLYVGRAQKKH 320
>gi|417403591|gb|JAA48595.1| Putative polyadenylate-binding protein rrm superfamily [Desmodus
rotundus]
Length = 644
Score = 44.3 bits (103), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE++ D+ L ++FS G+ +V ++R K + FG+
Sbjct: 176 RKEREAELGAKAKEFTNVYIKNFGEEMDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGF 235
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 236 VSY--EKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKF 280
>gi|405122146|gb|AFR96913.1| RNA-binding protein [Cryptococcus neoformans var. grubii H99]
Length = 508
Score = 44.3 bits (103), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 4/54 (7%)
Query: 9 EVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRT----KGRSFGYVDF 58
E +E IYVGGL ++T+ DL +FS GE+ V++VR K R FG++ +
Sbjct: 155 EYKESAYIYVGGLPFELTEGDLITIFSQWGEIMDVNLVRDKETGKSRGFGFLMY 208
>gi|417403696|gb|JAA48646.1| Putative polyadenylate-binding protein rrm superfamily [Desmodus
rotundus]
Length = 660
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE++ D+ L ++FS G+ +V ++R K + FG+
Sbjct: 176 RKEREAELGAKAKEFTNVYIKNFGEEMDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGF 235
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 236 VSY--EKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKF 280
>gi|428773895|ref|YP_007165683.1| RNP-1 like RNA-binding protein [Cyanobacterium stanieri PCC 7202]
gi|428688174|gb|AFZ48034.1| RNP-1 like RNA-binding protein [Cyanobacterium stanieri PCC 7202]
Length = 90
Score = 44.3 bits (103), Expect = 0.26, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 16 IYVGGLGEKVTDDDLAKVFSSLGEVK----AVDIVRTKGRSFGYVDFFPSSHKSLSKLFS 71
IYVG L VT++DL VFS G+VK VD + R FG+V+ SS
Sbjct: 3 IYVGNLSYDVTEEDLQTVFSDYGQVKRVYLPVDRETKRMRGFGFVEM--SSDSEEETAIE 60
Query: 72 TYNGCVWKGGRLRLERAK 89
T +G W G ++++ +AK
Sbjct: 61 TLDGAQWMGRQMKVNKAK 78
>gi|426397384|ref|XP_004064898.1| PREDICTED: RNA-binding motif protein, X-linked 2 [Gorilla gorilla
gorilla]
Length = 322
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 8 AEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK--GRSFGYVDFFPSSHKS 65
+E ++ I++GGL ++T+ D+ VFS GE+ +++VR K G+S G+ +S
Sbjct: 30 SEYKDSAWIFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRS 89
Query: 66 LSKLFSTYNGCVWKGGRLRLE 86
+NG KG +R++
Sbjct: 90 TILAVDNFNGIKIKGRTIRVD 110
>gi|344339676|ref|ZP_08770604.1| RNP-1 like RNA-binding protein [Thiocapsa marina 5811]
gi|343800412|gb|EGV18358.1| RNP-1 like RNA-binding protein [Thiocapsa marina 5811]
Length = 91
Score = 44.3 bits (103), Expect = 0.27, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 15 RIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK----GRSFGYVDFFPSSHKSLSKLF 70
RIYVG L VTDDDL VF GE+ A ++++ K + FG+VD +S +
Sbjct: 2 RIYVGNLTYSVTDDDLRDVFGQYGELAAAEVIKDKFSGQSKGFGFVDMPNNSEADAA--I 59
Query: 71 STYNGCVWKGGRLRLERAK 89
N +KG +L + A+
Sbjct: 60 KALNETDFKGRKLTVNEAR 78
>gi|431922543|gb|ELK19486.1| Polyadenylate-binding protein 4 [Pteropus alecto]
Length = 720
Score = 44.3 bits (103), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE+V D+ L ++FS G+ +V ++R K + FG+
Sbjct: 176 RKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGF 235
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 236 VSY--EKHEDANKAVEEMNGKEINGKVIFVGRAQKKVERQAELKRKF 280
>gi|357161949|ref|XP_003579258.1| PREDICTED: uncharacterized protein LOC100834061 [Brachypodium
distachyon]
Length = 668
Score = 44.3 bits (103), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 66/131 (50%), Gaps = 11/131 (8%)
Query: 14 TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK---GRSFGYVDFFPSSHKSLSKLF 70
T ++VGGL T+ L +VFS GE+ + I++ + + FG+V F +K
Sbjct: 70 TEVFVGGLPRSATEGTLREVFSPCGEIVDLRIMKDQNGVSKGFGFVRFAERECAYTAK-- 127
Query: 71 STYNGCVWKGGRLRLERAKEH---YLARLKREWA-EDDAQLVNPPVTDSVAPDNKDATRL 126
NG +G RL ++ + + + L +EW+ E+ +L++ D ++ D A+ L
Sbjct: 128 RQKNGIELQGKRLAVDLSLDQDTLFFGNLCKEWSVEEFEELIHKTFKDVISVDLATASNL 187
Query: 127 D--TPKKLLDK 135
D T K+ L++
Sbjct: 188 DSSTSKRRLNR 198
>gi|119632204|gb|EAX11799.1| RNA binding motif protein, X-linked 2, isoform CRA_a [Homo sapiens]
Length = 321
Score = 44.3 bits (103), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 8 AEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK--GRSFGYVDFFPSSHKS 65
+E ++ I++GGL ++T+ D+ VFS GE+ +++VR K G+S G+ +S
Sbjct: 29 SEYKDSAWIFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRS 88
Query: 66 LSKLFSTYNGCVWKGGRLRLE 86
+NG KG +R++
Sbjct: 89 TILAVDNFNGIKIKGRTIRVD 109
>gi|444517993|gb|ELV11894.1| RNA-binding motif protein, X-linked 2, partial [Tupaia chinensis]
Length = 323
Score = 44.3 bits (103), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 8 AEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK--GRSFGYVDFFPSSHKS 65
+E ++ I++GGL ++T+ D+ VFS GEV +++VR K G+S G+ +S
Sbjct: 27 SEYKDSAWIFLGGLPYELTEGDIICVFSQYGEVVNINLVRDKKTGKSKGFCFLCYEDQRS 86
Query: 66 LSKLFSTYNGCVWKGGRLRLE 86
+NG KG +R++
Sbjct: 87 TILAVDNFNGIKIKGRTIRVD 107
>gi|322711066|gb|EFZ02640.1| poly(A) RNA binding protein [Metarhizium anisopliae ARSEF 23]
Length = 743
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 55/99 (55%), Gaps = 9/99 (9%)
Query: 1 MEKKEAEAEVEEQ----TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSF 53
+ KK+ +++ EE T IY+ + + +DD+ ++F G++ + + R K R F
Sbjct: 225 IPKKDRQSKFEEMKANFTNIYIKNISTEASDDEFRELFEKYGDITSSSLARDQEGKSRGF 284
Query: 54 GYVDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERAKEHY 92
G+V+F ++H+S +K +G ++G L + RA++ +
Sbjct: 285 GFVNF--TTHESAAKAVEELHGKDFRGQDLYVGRAQKKH 321
>gi|425774283|gb|EKV12592.1| hypothetical protein PDIP_51790 [Penicillium digitatum Pd1]
gi|425776284|gb|EKV14506.1| hypothetical protein PDIG_32200 [Penicillium digitatum PHI26]
Length = 281
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 8/116 (6%)
Query: 8 AEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK--GRSFGYVDFFPSSHKS 65
A+ + IY+GGL +++ D+ +FS GE V++VR K G+S G+ +S
Sbjct: 27 ADYRDTAYIYIGGLPFDLSEGDVIAIFSQYGEPVHVNLVRDKETGKSKGFAFLKYEDQRS 86
Query: 66 LSKLFSTYNGCVWKGGRLRLERAKEHYLARLKREWAEDDAQLVNPPVTDSVAPDNK 121
G G LR++ AR KR+ E++ V + DS A +NK
Sbjct: 87 TDLAVDNLGGATVMGRLLRVDH------ARYKRKDDEEEQDNVAKLMGDSAASENK 136
>gi|225557655|gb|EEH05941.1| polyadenylate-binding protein [Ajellomyces capsulatus G186AR]
gi|240278336|gb|EER41843.1| polyadenylate-binding protein [Ajellomyces capsulatus H143]
gi|325096361|gb|EGC49671.1| polyadenylate-binding protein [Ajellomyces capsulatus H88]
Length = 784
Score = 44.3 bits (103), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 21/135 (15%)
Query: 1 MEKKEAEAEVEEQ----TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR----TKGRS 52
+ KK+ +++ EE T +YV L +V++++ ++F GE+ + I R K R
Sbjct: 219 IAKKDRQSKFEEMKANFTNVYVKNLDTEVSNEEFRELFEKYGEITSASISRDGETGKSRG 278
Query: 53 FGYVDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA-----------KEHYLARLKREWA 101
FG+V+F H+S + N +KG +L + RA K+H AR+++
Sbjct: 279 FGFVNFV--KHESAAAAVEELNDKEYKGQKLYVGRAQKKHEREEELRKQHEAARVEKASK 336
Query: 102 EDDAQLVNPPVTDSV 116
L +TD +
Sbjct: 337 YQGVNLYVKNLTDDI 351
>gi|86607423|ref|YP_476186.1| RNA-binding protein [Synechococcus sp. JA-3-3Ab]
gi|86555965|gb|ABD00923.1| putative RNA-binding protein [Synechococcus sp. JA-3-3Ab]
Length = 181
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 6/82 (7%)
Query: 14 TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR----TKGRSFGYVDFFPSSHKSLSKL 69
R+YVG L E+V L K+FSS GEV + ++R K R FG+V S+ + +
Sbjct: 3 VRLYVGNLPEEVDRQALEKLFSSAGEVISTKVIRDRRTGKCRGFGFVTV--STEEQAQQY 60
Query: 70 FSTYNGCVWKGGRLRLERAKEH 91
+NG + LR+E A+
Sbjct: 61 IEKFNGHSFGDVNLRIEIAQRR 82
>gi|242084538|ref|XP_002442694.1| hypothetical protein SORBIDRAFT_08g001290 [Sorghum bicolor]
gi|241943387|gb|EES16532.1| hypothetical protein SORBIDRAFT_08g001290 [Sorghum bicolor]
Length = 491
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 55/109 (50%), Gaps = 9/109 (8%)
Query: 2 EKKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKGRSFGYVD 57
++KE+ AE+ + +YVGG+ V+ DDL K+ S+GEV V + G+ + +V+
Sbjct: 81 DEKESHAELLSLPPHGSEVYVGGISSDVSSDDLRKLCESIGEVVEVRMPGKSGKLYAFVN 140
Query: 58 FFPSSHKSLSKLFSTYNGCVWKGGRLRLERAKEH---YLARLKREWAED 103
F + + K N KG ++R+ ++ ++ + +W ED
Sbjct: 141 F--RTKELAVKAIQKLNNKDLKGKKIRVSSSQAKNRLFIGNIPYKWTED 187
>gi|147769692|emb|CAN65531.1| hypothetical protein VITISV_039630 [Vitis vinifera]
Length = 555
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 2 EKKEAEAEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGYVDF 58
E+KEA E + T +YV LGE +T+D + FS G+V V I++ K R FG+V+F
Sbjct: 196 ERKEASEETKF-TNVYVKNLGEDLTEDIIRDKFSEFGKVGTVVIMKDGNGKSRGFGFVNF 254
Query: 59 FPSSHKSLSKLFSTYNGCVWKGGRLRLERAKE 90
S K NG + +L + RA++
Sbjct: 255 --ESPDEAKKAVEALNGAMLGSKKLFVGRAQK 284
Score = 39.7 bits (91), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 11 EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK---GRSFGYVDFFPSSHKSLS 67
E+ + +YV L V DD L + FSS G++ + ++R + FG+V F S+ +
Sbjct: 306 EKASNLYVKNLDASVDDDKLQEHFSSCGQITSAKVMRHDSGLSKGFGFVCF--STSEEAQ 363
Query: 68 KLFSTYNGCVWKGGRLRLERAK 89
K +T NG + G L + A+
Sbjct: 364 KALTTLNGTLLHGRSLYIAMAQ 385
>gi|298709087|emb|CBJ31035.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 497
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 44/94 (46%), Gaps = 12/94 (12%)
Query: 14 TRIYVGGLGEKVTDDDLAKVFS----SLGEVKAVDIVRTKG----RSFGYVDFFPSSH-- 63
R++VGGL V ++LA + + S +I+R R FGYV P
Sbjct: 11 VRLHVGGLARGVDPNELAALIARTLPSGTASPTAEIMRDASTGIERGFGYVSI-PGGEGV 69
Query: 64 -KSLSKLFSTYNGCVWKGGRLRLERAKEHYLARL 96
+ + Y+G WKGG++R+ AK YL RL
Sbjct: 70 KAGAERAIAAYDGARWKGGKIRVGFAKGDYLQRL 103
>gi|172035063|ref|YP_001801564.1| RNA-binding protein [Cyanothece sp. ATCC 51142]
gi|354551929|ref|ZP_08971237.1| RNP-1 like RNA-binding protein [Cyanothece sp. ATCC 51472]
gi|171696517|gb|ACB49498.1| RNA-binding protein [Cyanothece sp. ATCC 51142]
gi|353555251|gb|EHC24639.1| RNP-1 like RNA-binding protein [Cyanothece sp. ATCC 51472]
Length = 81
Score = 43.9 bits (102), Expect = 0.32, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 16 IYVGGLGEKVTDDDLAKVFSSLGEVKAVDIV--RTKGRSFGYVDFFPSSHKSLSKLFSTY 73
IYVG L +VTD DL VFS G VK + I R GR G+ + + SK T
Sbjct: 3 IYVGNLAYEVTDADLNTVFSDYGSVKRIHIPTDRETGRPRGFAFVEMDTEEEESKAIDTL 62
Query: 74 NGCVWKGGRLRLERAK 89
+G W G +++ +A+
Sbjct: 63 DGAEWMGRSMKVNQAR 78
>gi|166367328|ref|YP_001659601.1| RNA-binding region protein [Microcystis aeruginosa NIES-843]
gi|425440525|ref|ZP_18820825.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9717]
gi|166089701|dbj|BAG04409.1| RNA-binding region protein [Microcystis aeruginosa NIES-843]
gi|389719028|emb|CCH97091.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9717]
Length = 100
Score = 43.9 bits (102), Expect = 0.32, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 16 IYVGGLGEKVTDDDLAKVFSSLGEVK----AVDIVRTKGRSFGYVDFFPSSHKSLSKLFS 71
IYVG L VT DDL +VF+ G V VD K R FG+V+ SS + +K
Sbjct: 3 IYVGNLVYDVTTDDLKEVFAEYGTVSRVYLPVDRETGKMRGFGFVEM--SSDEEEAKAIE 60
Query: 72 TYNGCVWKGGRLRLERAK 89
T +G W G ++++ +A+
Sbjct: 61 TLDGAEWMGRQMKVNKAR 78
>gi|268531492|ref|XP_002630872.1| Hypothetical protein CBG02589 [Caenorhabditis briggsae]
Length = 302
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 16 IYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK--GRSFGYVDFFPSSHKSLSKLFSTY 73
IY+GGL +++ D+ VFS GEV ++++R K G+S G+ +S +
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTVLAVDNF 99
Query: 74 NGCVWKGGRLRLERAKEHYLARLK 97
NG +R++ +E+ + + K
Sbjct: 100 NGITLHKRMIRVDHVEEYKVPKYK 123
>gi|355715858|gb|AES05425.1| RNA binding motif protein, X-linked 2 [Mustela putorius furo]
Length = 182
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 8 AEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK--GRSFGYVDFFPSSHKS 65
+E ++ I++GGL ++T+ D+ VFS GE+ +++VR K G+S G+ +S
Sbjct: 37 SEYKDSAWIFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRS 96
Query: 66 LSKLFSTYNGCVWKGGRLRLERAKEH 91
+NG KG +R++ +
Sbjct: 97 TILAVDNFNGIKIKGRTIRVDHVSNY 122
>gi|261199248|ref|XP_002626025.1| polyadenylate-binding protein [Ajellomyces dermatitidis SLH14081]
gi|239594233|gb|EEQ76814.1| polyadenylate-binding protein [Ajellomyces dermatitidis SLH14081]
Length = 783
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 62/135 (45%), Gaps = 21/135 (15%)
Query: 1 MEKKEAEAEVEEQ----TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR----TKGRS 52
+ KK+ +++ EE T +YV L KVT+++ ++F G++ + I K R
Sbjct: 219 IAKKDRQSKFEEMKANFTNVYVKNLDTKVTNEEFRELFGKYGDITSASITHDSETGKSRG 278
Query: 53 FGYVDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA-----------KEHYLARLKREWA 101
FG+V+F H+S + N +KG +L + RA K+H AR+++
Sbjct: 279 FGFVNFV--KHESAAAAVEELNDKEFKGQKLYVGRAQKKHEREEELRKQHEAARVEKASK 336
Query: 102 EDDAQLVNPPVTDSV 116
L +TD +
Sbjct: 337 YQGVNLYVKNLTDDI 351
>gi|427740185|ref|YP_007059729.1| RRM domain-containing RNA-binding protein [Rivularia sp. PCC
7116]
gi|427375226|gb|AFY59182.1| RRM domain-containing RNA-binding protein [Rivularia sp. PCC
7116]
Length = 95
Score = 43.9 bits (102), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 16 IYVGGLGEKVTDDDLAKVFSSLGEVKAVDIV--RTKGRS--FGYVDFFPSSHKSLSKLFS 71
IYVG L VT +DL+KVF+ G VK V + R GRS FG+V+ S S
Sbjct: 3 IYVGNLSYDVTQEDLSKVFAEYGSVKRVQLPTDRETGRSRGFGFVEM--QSEDEESSAIQ 60
Query: 72 TYNGCVWKGGRLRLERAK 89
+G W G +++ +A+
Sbjct: 61 ALDGAEWMGRAMKVNKAR 78
>gi|5531845|gb|AAD44497.1| RNA-binding protein [Homo sapiens]
Length = 276
Score = 43.9 bits (102), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 8 AEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK--GRSFGYVDFFPSSHKS 65
+E ++ I++GGL ++T+ D+ VFS GE+ +++VR K G+S G+ +S
Sbjct: 30 SEYKDSAWIFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRS 89
Query: 66 LSKLFSTYNGCVWKGGRLRLE 86
+NG KG +R++
Sbjct: 90 TILAVDNFNGIKIKGRTIRVD 110
>gi|393216848|gb|EJD02338.1| polyadenylate binding protein [Fomitiporia mediterranea MF3/22]
Length = 701
Score = 43.9 bits (102), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Query: 1 MEKKEAEAEVEEQ----TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSF 53
+ KKE +A ++EQ T +YV L +VTDD+ +F+ GEV + + + K + F
Sbjct: 220 ISKKERQAHIDEQKSQFTNLYVKNLDTEVTDDEFNDMFAKFGEVTSAVVQKDEEGKSKGF 279
Query: 54 GYVDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERAKE 90
G+V+F H+S + G +L + RA++
Sbjct: 280 GFVNF--KDHESAQAAVDALHDTELNGKKLFVTRAQK 314
>gi|295674319|ref|XP_002797705.1| polyadenylate-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226280355|gb|EEH35921.1| polyadenylate-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 822
Score = 43.9 bits (102), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 21/135 (15%)
Query: 1 MEKKEAEAEVEEQ----TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR----TKGRS 52
+ KK+ +++ EE T +YV L +VT+++ ++F GE+ + + R K R
Sbjct: 218 IAKKDRQSKFEEMKANFTNVYVKNLEPEVTNEEFRELFEKYGEITSASLSRDNETGKSRG 277
Query: 53 FGYVDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA-----------KEHYLARLKREWA 101
FG+V+F +H S + N +KG +L + RA K+H AR+++
Sbjct: 278 FGFVNFV--NHDSAAAAVEDLNDKEYKGQKLYVGRAQKKHEREEELRKQHEAARVEKASK 335
Query: 102 EDDAQLVNPPVTDSV 116
L +TD +
Sbjct: 336 YQGVNLYVKNLTDDI 350
>gi|297743165|emb|CBI36032.3| unnamed protein product [Vitis vinifera]
Length = 476
Score = 43.9 bits (102), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 2 EKKEAEAEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGYVDF 58
E+KEA E + T +YV LGE +T+D + FS G+V V I++ K R FG+V+F
Sbjct: 196 ERKEASEETKF-TNVYVKNLGEDLTEDIIRDKFSEFGKVGTVVIMKDGNGKSRGFGFVNF 254
Query: 59 FPSSHKSLSKLFSTYNGCVWKGGRLRLERAKE 90
S K NG + +L + RA++
Sbjct: 255 --ESPDEAKKAVEALNGAMLGSKKLFVGRAQK 284
>gi|226287551|gb|EEH43064.1| polyadenylate-binding protein [Paracoccidioides brasiliensis Pb18]
Length = 761
Score = 43.9 bits (102), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 21/135 (15%)
Query: 1 MEKKEAEAEVEEQ----TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR----TKGRS 52
+ KK+ +++ EE T +YV L +VT+++ ++F GE+ + + R K R
Sbjct: 218 IAKKDRQSKFEEMKANFTNVYVKNLEPEVTNEEFRELFEKYGEITSASLSRDNETGKSRG 277
Query: 53 FGYVDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA-----------KEHYLARLKREWA 101
FG+V+F +H S + N +KG +L + RA K+H AR+++
Sbjct: 278 FGFVNFV--NHDSAAAAVEDLNDKEYKGQKLYVGRAQKKHEREEELRKQHEAARVEKASK 335
Query: 102 EDDAQLVNPPVTDSV 116
L +TD +
Sbjct: 336 YQGVNLYVKNLTDDI 350
>gi|443326242|ref|ZP_21054903.1| RRM domain-containing RNA-binding protein [Xenococcus sp. PCC
7305]
gi|442794168|gb|ELS03594.1| RRM domain-containing RNA-binding protein [Xenococcus sp. PCC
7305]
Length = 101
Score = 43.9 bits (102), Expect = 0.37, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 16 IYVGGLGEKVTDDDLAKVFSSLGEVKAV----DIVRTKGRSFGYVDFFPSSHKSLSKLFS 71
IYVG + KVT++DL+ VF+ G VK V D + R FG+V+ ++ K
Sbjct: 3 IYVGNIPYKVTEEDLSGVFADYGTVKRVYLPTDRESGRMRGFGFVEM--ANEAEEDKAIE 60
Query: 72 TYNGCVWKGGRLRLERAK 89
T +G W G LR+ +A+
Sbjct: 61 TLDGAEWMGRELRVNKAR 78
>gi|392586895|gb|EIW76230.1| hypothetical protein CONPUDRAFT_111036 [Coniophora puteana
RWD-64-598 SS2]
Length = 321
Score = 43.9 bits (102), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 54/117 (46%), Gaps = 7/117 (5%)
Query: 9 EVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK--GRSFGYVDFFPSSHKSL 66
E ++ IYVGGL +T+ D+ +FS GEV V++ R K G++ G+ +S
Sbjct: 26 EYKDSAYIYVGGLHFDLTEGDVITIFSQYGEVMDVNLPRDKHTGKTKGFGFLMYEDQRST 85
Query: 67 SKLFSTYNGCVWKGGRLRLERAKEHYLARLK---REWAEDDAQLVN--PPVTDSVAP 118
NG LR++ K++ + K EW E D Q +N P +T P
Sbjct: 86 ILAVDNLNGANVLDKTLRVDHVKDYKQPKEKGDDGEWHERDEQSMNAKPEITMEDGP 142
>gi|75275079|sp|P82277.1|RRP2_SPIOL RecName: Full=30S ribosomal protein 2, chloroplastic; AltName:
Full=Plastid-specific 30S ribosomal protein 2;
Short=PSRP-2; Flags: Precursor
gi|7578881|gb|AAF64167.1|AF240462_1 plastid-specific ribosomal protein 2 precursor [Spinacia oleracea]
Length = 260
Score = 43.9 bits (102), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Query: 10 VEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKGRS----FGYVDFFPSSHKS 65
VE ++Y+G L + VT++ L FS G+V + RT G S FG+V F SS +
Sbjct: 180 VESPYKVYIGNLAKTVTNELLKDFFSEKGKVLGAKVQRTPGTSKSNGFGFVSF--SSEEE 237
Query: 66 LSKLFSTYNGCVWKGGRLRLERA 88
+ N V +G ++R+ +A
Sbjct: 238 VEAAIQALNNSVLEGQKIRVNKA 260
>gi|434406111|ref|YP_007148996.1| RRM domain-containing RNA-binding protein [Cylindrospermum
stagnale PCC 7417]
gi|428260366|gb|AFZ26316.1| RRM domain-containing RNA-binding protein [Cylindrospermum
stagnale PCC 7417]
Length = 94
Score = 43.9 bits (102), Expect = 0.40, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 16 IYVGGLGEKVTDDDLAKVFSSLGEVKAV----DIVRTKGRSFGYVDFFPSSHKSLSKLFS 71
IYVG L + T+ DL VF+ GEVK V D + R F +VD S + K +
Sbjct: 3 IYVGNLSYQATEADLKSVFADYGEVKRVVLPTDRETGRLRGFAFVDMMEDSQE--DKAIT 60
Query: 72 TYNGCVWKGGRLRLERAK 89
+G W G +LR+ +AK
Sbjct: 61 ELDGAEWMGRQLRVNKAK 78
>gi|258565691|ref|XP_002583590.1| polyadenylate-binding protein [Uncinocarpus reesii 1704]
gi|237907291|gb|EEP81692.1| polyadenylate-binding protein [Uncinocarpus reesii 1704]
Length = 765
Score = 43.5 bits (101), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 53/100 (53%), Gaps = 10/100 (10%)
Query: 1 MEKKEAEAEVEEQ----TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR----TKGRS 52
+ KK+ +++ EE T +YV + + TD++ ++F GE+ + + R K R
Sbjct: 218 IAKKDRQSKFEEMKANFTNVYVKNIDQDTTDEEFRELFEKFGEITSATLARDSESGKSRG 277
Query: 53 FGYVDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERAKEHY 92
FG+V+F +SH+S + N +K +L + RA++ +
Sbjct: 278 FGFVNF--TSHESAAAAVDNLNEKDFKSQKLYVGRAQKKH 315
>gi|411119073|ref|ZP_11391453.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
gi|410710936|gb|EKQ68443.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
Length = 85
Score = 43.5 bits (101), Expect = 0.45, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 16 IYVGGLGEKVTDDDLAKVFSSLGEVKAV----DIVRTKGRSFGYVDFFPSSHKSLSKLFS 71
IYVG L + T DDL +VF+ G VK V D K R F +V+ +H+ + S
Sbjct: 3 IYVGNLSYRATADDLTEVFAEYGAVKRVSLPMDRETGKMRGFAFVELEEDAHEDTA--IS 60
Query: 72 TYNGCVWKGGRLRLERAKEHYLAR 95
+G W G +L++ +AK R
Sbjct: 61 ELDGAEWMGRQLKVNKAKPREATR 84
>gi|390465724|ref|XP_002750686.2| PREDICTED: polyadenylate-binding protein 4 [Callithrix jacchus]
Length = 656
Score = 43.5 bits (101), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 55/107 (51%), Gaps = 11/107 (10%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+KE EAE+ +E T +Y+ GE+V D+ L ++F G+ +V ++R K + FG+
Sbjct: 176 RKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFIQFGKTLSVKVMRDPNGKSKGFGF 235
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
V + H+ +K NG G + + RA K A LKR++
Sbjct: 236 VSY--EKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKF 280
>gi|434391462|ref|YP_007126409.1| RNP-1 like RNA-binding protein [Gloeocapsa sp. PCC 7428]
gi|428263303|gb|AFZ29249.1| RNP-1 like RNA-binding protein [Gloeocapsa sp. PCC 7428]
Length = 101
Score = 43.5 bits (101), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 16 IYVGGLGEKVTDDDLAKVFSSLGEVKAVDIV--RTKG--RSFGYVDFFPSSHKSLSKLFS 71
IYVG L +VT DDL+ +F+ G VK V + R G R FG+V+ S + S
Sbjct: 3 IYVGNLSFEVTQDDLSSIFAEYGTVKRVQLPTDRETGLPRGFGFVEM--ESEAAESTAIE 60
Query: 72 TYNGCVWKGGRLRLERAK 89
+G W G +++ +AK
Sbjct: 61 ALDGAEWMGRTMKVNKAK 78
>gi|395645925|ref|ZP_10433785.1| RNP-1 like RNA-binding protein [Methanofollis liminatans DSM 4140]
gi|395442665|gb|EJG07422.1| RNP-1 like RNA-binding protein [Methanofollis liminatans DSM 4140]
Length = 86
Score = 43.5 bits (101), Expect = 0.48, Method: Composition-based stats.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 12 EQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKGRSFGYVDFFPSSHKSLSKLFS 71
E +R+YVG L VT+ L ++FS G+VK+V I+ KG FG+V+ S + K
Sbjct: 2 ETSRLYVGNLTYSVTEKQLEELFSQYGDVKSVKIIGDKG--FGFVEM--GSPEEAEKAKE 57
Query: 72 TYNGCVWKGGRLRLERAKEHYLARLKREW 100
N V+ G LR++ A+ R +RE+
Sbjct: 58 ALNETVFVGRTLRIDEAQP---PRPRREF 83
>gi|428313428|ref|YP_007124405.1| RRM domain-containing RNA-binding protein [Microcoleus sp. PCC
7113]
gi|428255040|gb|AFZ20999.1| RRM domain-containing RNA-binding protein [Microcoleus sp. PCC
7113]
Length = 93
Score = 43.5 bits (101), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 16 IYVGGLGEKVTDDDLAKVFSSLGEVKAVDIV--RTKGRS--FGYVDFFPSSHKSLSKLFS 71
IYVG L +VT +DL+ VF+ G VK V I R GRS FG+V+ + + +
Sbjct: 3 IYVGNLSYQVTSEDLSSVFAEYGTVKRVQIPTDRETGRSRGFGFVEMETEAEEDAA--IQ 60
Query: 72 TYNGCVWKGGRLRLERAK 89
+G W G L++ +AK
Sbjct: 61 ELDGAEWMGRSLKVNKAK 78
>gi|449443125|ref|XP_004139331.1| PREDICTED: uncharacterized protein LOC101205569 [Cucumis sativus]
Length = 346
Score = 43.5 bits (101), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Query: 10 VEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGYVDF 58
V++ + IYVGGL T+D L ++F G V AV I+ T+G+ +G+V F
Sbjct: 3 VDDDSSIYVGGLPYDATEDSLRRIFDLYGAVVAVKIINDRSTRGKCYGFVTF 54
>gi|422303993|ref|ZP_16391342.1| putative RNA-binding protein rbpB [Microcystis aeruginosa PCC
9806]
gi|425468337|ref|ZP_18847364.1| putative RNA-binding protein rbpB [Microcystis aeruginosa PCC
9701]
gi|389790955|emb|CCI13203.1| putative RNA-binding protein rbpB [Microcystis aeruginosa PCC
9806]
gi|389885016|emb|CCI34745.1| putative RNA-binding protein rbpB [Microcystis aeruginosa PCC
9701]
Length = 100
Score = 43.5 bits (101), Expect = 0.50, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 16 IYVGGLGEKVTDDDLAKVFSSLGEVK----AVDIVRTKGRSFGYVDFFPSSHKSLSKLFS 71
IYVG L VT DDL +VF+ G V VD K R FG+V+ SS + +K
Sbjct: 3 IYVGNLVYDVTTDDLKEVFAEYGTVSRVYLPVDRETGKMRGFGFVEM--SSDEEEAKAIE 60
Query: 72 TYNGCVWKGGRLRLERAK 89
T +G W G ++++ +A+
Sbjct: 61 TLDGAEWMGRQMKVNKAR 78
>gi|390597906|gb|EIN07305.1| polyadenylate binding protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 668
Score = 43.5 bits (101), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 52/95 (54%), Gaps = 9/95 (9%)
Query: 3 KKEAEAEVEEQ----TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
KK+ +A+++EQ T +YV + + DD+ ++F+ G V + + R + R FG+
Sbjct: 218 KKDRQAKLDEQKKQFTNVYVKNIDPEANDDEFRELFTPFGNVTSAVLQRDEEGRSRGFGF 277
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERAKE 90
V+F +H+ K T + +KG +L + RA++
Sbjct: 278 VNF--ETHEEAQKAVDTLHDSDFKGRKLFVSRAQK 310
>gi|397496325|ref|XP_003846130.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding motif protein, X-linked
2 [Pan paniscus]
Length = 350
Score = 43.5 bits (101), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 8 AEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK--GRSFGYVDFFPSSHKS 65
+E ++ I++GGL ++T+ D+ VFS GE+ +++VR K G+S G+ +S
Sbjct: 30 SEYKDSAWIFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRS 89
Query: 66 LSKLFSTYNGCVWKGGRLRLERAKEH 91
+NG KG +R++ +
Sbjct: 90 TILAVDNFNGIKIKGRTIRVDHVSNY 115
>gi|111226498|ref|XP_001134546.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|90970613|gb|EAS66863.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 348
Score = 43.1 bits (100), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 16 IYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK--GRSFGYVDFFPSSHKSLSKLFSTY 73
IYVGGL + + D+ +FS GE+ ++VR K GRS G+ KS
Sbjct: 35 IYVGGLNYDLNEGDVIAIFSQYGEISECNLVRNKETGRSQGFCFVGYDQQKSTVLAVDNL 94
Query: 74 NGCVWKGGRLRLERAKEH 91
NG G ++++ K++
Sbjct: 95 NGINLLGKTIKVDHVKDY 112
>gi|4929627|gb|AAD34074.1|AF151837_1 CGI-79 protein [Homo sapiens]
Length = 351
Score = 43.1 bits (100), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 8 AEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK--GRSFGYVDFFPSSHKS 65
+E ++ I++GGL ++T+ D+ VFS GE+ +++VR K G+S G+ +S
Sbjct: 30 SEYKDSAWIFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRS 89
Query: 66 LSKLFSTYNGCVWKGGRLRLERAKEH 91
+NG KG +R++ +
Sbjct: 90 TILAVDNFNGIKIKGRTIRVDHVSNY 115
>gi|116283305|gb|AAH03676.1| RBMX2 protein [Homo sapiens]
Length = 163
Score = 43.1 bits (100), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 2 EKKEAEAEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK--GRSFGYVDFF 59
+K +E ++ I++GGL ++T+ D+ VFS GE+ +++VR K G+S G+
Sbjct: 24 DKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLC 83
Query: 60 PSSHKSLSKLFSTYNGCVWKGGRLRLERAKEH 91
+S +NG KG +R++ +
Sbjct: 84 YEDQRSTILAVDNFNGIKIKGRTIRVDHVSNY 115
>gi|111494063|gb|AAI05583.1| RBMX2 protein [Homo sapiens]
Length = 173
Score = 43.1 bits (100), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 2 EKKEAEAEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK--GRSFGYVDFF 59
+K +E ++ I++GGL ++T+ D+ VFS GE+ +++VR K G+S G+
Sbjct: 24 DKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLC 83
Query: 60 PSSHKSLSKLFSTYNGCVWKGGRLRLERAKEH 91
+S +NG KG +R++ +
Sbjct: 84 YEDQRSTILAVDNFNGIKIKGRTIRVDHVSNY 115
>gi|410929842|ref|XP_003978308.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Takifugu
rubripes]
Length = 341
Score = 43.1 bits (100), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 8 AEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK--GRSFGYVDFFPSSHKS 65
+E ++ +++GG ++++ D+ VFS GE+ +++VR K G+S G+ +S
Sbjct: 30 SEYKDSAWVFIGGFPYELSEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRS 89
Query: 66 LSKLFSTYNGCVWKGGRLRLERAKEH 91
+NG KG +R++ K++
Sbjct: 90 TILAVDNFNGIKIKGRTIRVDHVKDY 115
>gi|186685885|ref|YP_001869081.1| RNP-1 like RNA-binding protein [Nostoc punctiforme PCC 73102]
gi|186468337|gb|ACC84138.1| RNP-1 like RNA-binding protein [Nostoc punctiforme PCC 73102]
Length = 109
Score = 43.1 bits (100), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 16 IYVGGLGEKVTDDDLAKVFSSLGEVKAVDIV--RTKGRSFGYVDFFPSSHKSLSKLFSTY 73
IYVG L +VT D L+ VF+ G VK V + R GR G+ SS +K +
Sbjct: 3 IYVGNLSYEVTQDALSTVFAEYGSVKRVQLPTDRETGRLRGFAFVEMSSEDEETKAIESL 62
Query: 74 NGCVWKGGRLRLERAK 89
+G W G L++ +AK
Sbjct: 63 DGAEWMGRDLKVNKAK 78
>gi|119486604|ref|ZP_01620654.1| RNA-binding region [Lyngbya sp. PCC 8106]
gi|119456221|gb|EAW37353.1| RNA-binding region [Lyngbya sp. PCC 8106]
Length = 100
Score = 43.1 bits (100), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 16 IYVGGLGEKVTDDDLAKVFSSLGEVKAVDIV--RTKGRSFGYVDFFPSSHKSLSKLFSTY 73
+Y+G L +VT+DDL VF+ G VK V I R GRS G+ + +
Sbjct: 3 VYIGNLAYEVTEDDLKSVFTDYGSVKRVHIPTDRETGRSRGFAFVEMDTDSEETSAIEEL 62
Query: 74 NGCVWKGGRLRLERAK 89
+G W G L++ +AK
Sbjct: 63 DGAEWMGRDLKVNKAK 78
>gi|327284806|ref|XP_003227126.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Anolis
carolinensis]
Length = 287
Score = 43.1 bits (100), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 8 AEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK--GRSFGYVDFFPSSHKS 65
+E + ++VGGL ++T+ D+ VFS GE+ +++VR K G+S G+ +S
Sbjct: 30 SEYNDSAWVFVGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFICYEDQRS 89
Query: 66 LSKLFSTYNGCVWKGGRLRLE 86
+NG KG +R++
Sbjct: 90 TILAVDNFNGIKIKGRTIRVD 110
>gi|225678061|gb|EEH16345.1| polyadenylate-binding protein [Paracoccidioides brasiliensis Pb03]
Length = 755
Score = 43.1 bits (100), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 21/135 (15%)
Query: 1 MEKKEAEAEVEEQ----TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR----TKGRS 52
+ KK+ +++ EE T +YV L +VT+++ ++F GE+ + + R K R
Sbjct: 218 IAKKDRQSKFEEMKANFTNVYVKNLEPEVTNEEFRELFEKYGEITSASLSRDNETGKSRG 277
Query: 53 FGYVDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA-----------KEHYLARLKREWA 101
FG+V+F +H S + N +KG +L + RA K+H AR+++
Sbjct: 278 FGFVNFV--NHDSAAAAVEDLNDKEYKGQKLYVGRAQKKHEREEELRKQHEAARVEKASK 335
Query: 102 EDDAQLVNPPVTDSV 116
L +TD +
Sbjct: 336 YQGVNLYVKNLTDDI 350
>gi|403367221|gb|EJY83425.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 543
Score = 43.1 bits (100), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 52/97 (53%), Gaps = 15/97 (15%)
Query: 3 KKEAEAEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR-------TKGRSFG- 54
KKE EV+ R+Y+G + + D+D+ K+ S G +KA ++V+ KG +F
Sbjct: 319 KKEKVEEVD--NRLYMGNIPNSMKDEDVKKMCESFGRLKAFNLVKDPMNPDLNKGYAFFE 376
Query: 55 YVDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERAKEH 91
YVD +S+ K + NG +K +L++++A H
Sbjct: 377 YVD-----ERSIDKAIKSLNGLDFKEKKLKVQKASAH 408
>gi|242083906|ref|XP_002442378.1| hypothetical protein SORBIDRAFT_08g019135 [Sorghum bicolor]
gi|241943071|gb|EES16216.1| hypothetical protein SORBIDRAFT_08g019135 [Sorghum bicolor]
Length = 213
Score = 42.7 bits (99), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 61/122 (50%), Gaps = 9/122 (7%)
Query: 5 EAEAEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK---GRSFGYVDFFPS 61
E + T ++VGGL T+ L ++FSS GE+ V I++ + + +G+V F
Sbjct: 66 EQDPRTARGTEVFVGGLPRSATESMLREIFSSCGEIIDVRIMKDQNGHSKGYGFVRFSKR 125
Query: 62 SHKSLSKLFSTYNGCVWKGGRLRLERAKEH---YLARLKREW-AEDDAQLVNPPVTDSVA 117
+ + +K NG +G RL ++ + + + L +EW +E+ +L++ D V+
Sbjct: 126 EYANTAK--RQKNGIELQGKRLDVDLSMDQDTVFFGNLCKEWTSEEFEELIHKTFKDVVS 183
Query: 118 PD 119
D
Sbjct: 184 VD 185
>gi|321262344|ref|XP_003195891.1| hypothetical protein CGB_H5040W [Cryptococcus gattii WM276]
gi|317462365|gb|ADV24104.1| Conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 401
Score = 42.7 bits (99), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 4/54 (7%)
Query: 9 EVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR----TKGRSFGYVDF 58
E ++ IYVGGL ++T+ DL +FS GE+ V++VR K R FG++ +
Sbjct: 26 EYKDSAYIYVGGLPFELTEGDLITIFSQWGEIMDVNLVRDKETGKSRGFGFLMY 79
>gi|428768443|ref|YP_007160233.1| RNP-1 like RNA-binding protein [Cyanobacterium aponinum PCC
10605]
gi|428682722|gb|AFZ52189.1| RNP-1 like RNA-binding protein [Cyanobacterium aponinum PCC
10605]
Length = 81
Score = 42.7 bits (99), Expect = 0.77, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 16 IYVGGLGEKVTDDDLAKVFSSLGEVKAV----DIVRTKGRSFGYVDFFPSSHKSLSKLFS 71
IYVG L ++++DL VF+ GEVK V D + R FG+V+ S+ K
Sbjct: 3 IYVGNLSYDISENDLQSVFADYGEVKRVYLPLDRETKRKRGFGFVEM--SNDDEEIKAIE 60
Query: 72 TYNGCVWKGGRLRLERAK 89
T +G W G ++++ +AK
Sbjct: 61 TLDGAQWMGRQIKVNKAK 78
>gi|67923265|ref|ZP_00516750.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|67854891|gb|EAM50165.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
Length = 94
Score = 42.7 bits (99), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 16 IYVGGLGEKVTDDDLAKVFSSLGEVKAVDIV--RTKGRSFGYVDFFPSSHKSLSKLFSTY 73
IYVG L V +DL +VF+ G VK V I R GR G+ S + ST
Sbjct: 3 IYVGNLSYDVNKEDLEEVFTEYGSVKRVHIPKDRESGRMRGFAFVEMDSDDQEQEAISTL 62
Query: 74 NGCVWKGGRLRLERAKEH 91
+G W G L++ +AKE
Sbjct: 63 DGAEWMGRTLKVNKAKER 80
>gi|416401897|ref|ZP_11687293.1| RNA-binding protein [Crocosphaera watsonii WH 0003]
gi|357261987|gb|EHJ11191.1| RNA-binding protein [Crocosphaera watsonii WH 0003]
Length = 94
Score = 42.7 bits (99), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 16 IYVGGLGEKVTDDDLAKVFSSLGEVKAVDIV--RTKGRSFGYVDFFPSSHKSLSKLFSTY 73
IYVG L V +DL +VF+ G VK V I R GR G+ S + ST
Sbjct: 3 IYVGNLSYDVNKEDLEEVFTEYGSVKRVHIPKDRESGRVRGFAFVEMDSDDQEQEAISTL 62
Query: 74 NGCVWKGGRLRLERAKEH 91
+G W G L++ +AKE
Sbjct: 63 DGAEWMGRTLKVNKAKER 80
>gi|428300369|ref|YP_007138675.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 6303]
gi|428236913|gb|AFZ02703.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 6303]
Length = 115
Score = 42.4 bits (98), Expect = 1.00, Method: Composition-based stats.
Identities = 30/78 (38%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 16 IYVGGLGEKVTDDDLAKVFSSLGEVKAVDIV--RTKG--RSFGYVDFFPSSHKSLSKLFS 71
IYVG L VT DDL KVFS G V V + R G R FG+V+ S + + S
Sbjct: 3 IYVGNLSYSVTQDDLTKVFSEYGTVTRVQLPTDRETGRVRGFGFVEM--ESEAAETAAIS 60
Query: 72 TYNGCVWKGGRLRLERAK 89
+G W G L++ +A+
Sbjct: 61 ALDGAEWMGRALKVNKAR 78
>gi|378755700|gb|EHY65726.1| hypothetical protein NERG_01333 [Nematocida sp. 1 ERTm2]
Length = 316
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 16 IYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK----GRSFGYVDFFP--SSHKSLSKL 69
I++ GL T+D+L ++F GE+ V I R++ G+ FGYV+F + KS S
Sbjct: 93 IFIKGLNFSATEDELKELFGQFGEIVEVRIPRSRDGPGGKGFGYVEFESKEACEKSRSLN 152
Query: 70 FSTYNG 75
+ YNG
Sbjct: 153 GTDYNG 158
>gi|281206617|gb|EFA80803.1| hypothetical protein PPL_06390 [Polysphondylium pallidum PN500]
Length = 975
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 11/93 (11%)
Query: 15 RIYVGGLGEKVTDDDLAKVFSSLG------EVKAV-DIVRTKGRSFGYVDFFPSSHKSLS 67
R+Y+GGL E V +L+K+F+S+ +++ V D V + F + D F S SL+
Sbjct: 263 RMYIGGLSENVELSELSKLFTSISSNCNVEQLEHVYDEVTKVYKGFAFADIFFQSQDSLT 322
Query: 68 KLFSTYNGCVWKGGRLRLERAKEHYLARLKREW 100
L ++ N WKG L + +A HY K++W
Sbjct: 323 LLLNSLNKTKWKGSVLTIAKASLHY----KKKW 351
>gi|411119198|ref|ZP_11391578.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
gi|410711061|gb|EKQ68568.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
Length = 104
Score = 42.4 bits (98), Expect = 1.1, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 16 IYVGGLGEKVTDDDLAKVFSSLGEVKAVDIV--RTKGRSFGYVDFFPSSHKSLSKLFSTY 73
+YVG L KVT+DDL + FS G+V +V + R GR G+ SS +
Sbjct: 3 VYVGNLSFKVTEDDLVETFSEYGKVVSVQLPKDRETGRMRGFAFVEMSSETEEAAAIDAL 62
Query: 74 NGCVWKGGRLRLERAK 89
+G W G L++ +AK
Sbjct: 63 DGAEWMGRDLKVNKAK 78
>gi|255949586|ref|XP_002565560.1| Pc22g16450 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592577|emb|CAP98933.1| Pc22g16450 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 279
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 4/108 (3%)
Query: 8 AEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK--GRSFGYVDFFPSSHKS 65
A+ + IY+GGL +++ D+ +FS GE V++VR K G+S G+ +S
Sbjct: 27 ADYRDTAYIYIGGLPFDLSEGDIITIFSQYGEPVHVNLVRDKETGKSKGFAFLKYEDQRS 86
Query: 66 LSKLFSTYNGCVWKGGRLRLERAKEHYLARLKREWAEDDAQLVNPPVT 113
G G LR++ A+ Y + E ++ A+L+ PV
Sbjct: 87 TDLAVDNLGGATVMGRLLRVDHAR--YKRKDDEEEQDNVARLMGDPVI 132
>gi|281200597|gb|EFA74815.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 425
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 9/102 (8%)
Query: 4 KEAEAEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK--GRSFGYVDFFPS 61
KE AE E ++VGG+ + VT+DDL VF+S+G V+ + +++ K G S GY
Sbjct: 41 KEPMAENE----VFVGGVSKNVTEDDLQSVFNSVGSVRQIRLMKNKLNGESKGYAFITFE 96
Query: 62 SHKSLSKLFSTYNGCVWKGGRLRL---ERAKEHYLARLKREW 100
S + KG LR+ E ++ +L L +E+
Sbjct: 97 DKSSCQMAVEKISNKELKGKSLRVKYSENRRKLFLGNLPKEF 138
>gi|434395383|ref|YP_007130330.1| RNP-1 like RNA-binding protein [Gloeocapsa sp. PCC 7428]
gi|428267224|gb|AFZ33170.1| RNP-1 like RNA-binding protein [Gloeocapsa sp. PCC 7428]
Length = 101
Score = 42.4 bits (98), Expect = 1.1, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 16 IYVGGLGEKVTDDDLAKVFSSLGEVKAVDIV--RTKG--RSFGYVDFFPSSHKSLSKLFS 71
+YVG L +VT +DL+ VF+ G VK V + R G R FG+V+ + + L+
Sbjct: 3 VYVGNLSYEVTQEDLSAVFAEYGSVKRVQLPTDRETGRVRGFGFVEMDTEAEEDLA--ID 60
Query: 72 TYNGCVWKGGRLRLERAK 89
+G W G LR+ +AK
Sbjct: 61 ALDGAEWMGRTLRVNKAK 78
>gi|358372137|dbj|GAA88742.1| polyadenylate-binding protein [Aspergillus kawachii IFO 4308]
Length = 763
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 61/134 (45%), Gaps = 20/134 (14%)
Query: 1 MEKKEAEAEVEEQ----TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSF 53
+ KK+ +++ EE T +Y+ L ++ DD+ K+F GE+ + + R K R F
Sbjct: 216 ISKKDRQSKFEEMKANFTNVYIKNLDSEIDDDEFRKMFEKFGEITSATLSRDQEGKSRGF 275
Query: 54 GYVDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA-----------KEHYLARLKREWAE 102
G+V+F S+H+S N + +L + RA K++ ARL++
Sbjct: 276 GFVNF--STHESAQAAVEEMNDKEIRSQKLYVGRAQKKHEREEELRKQYEAARLEKASKY 333
Query: 103 DDAQLVNPPVTDSV 116
L +TD +
Sbjct: 334 QGVNLYVKNLTDDI 347
>gi|449509482|ref|XP_004163601.1| PREDICTED: uncharacterized LOC101205569 [Cucumis sativus]
Length = 195
Score = 42.0 bits (97), Expect = 1.2, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 5/100 (5%)
Query: 10 VEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGYVDFFPSSHKSL 66
V++ + IYVGGL T+D L ++F G V AV I+ T+G+ +G+V F ++ +S
Sbjct: 3 VDDDSSIYVGGLPYDATEDSLRRIFDLYGAVVAVKIINDRSTRGKCYGFVTF--TNPRSA 60
Query: 67 SKLFSTYNGCVWKGGRLRLERAKEHYLARLKREWAEDDAQ 106
+G +G +R+ K R +E DA+
Sbjct: 61 IDAIKDMDGRTIEGRVVRVNGVKSRLGGRFGKEGNRFDAE 100
>gi|330864692|ref|NP_001193477.1| RNA-binding motif protein, X-linked 2-like [Bos taurus]
Length = 330
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 9/109 (8%)
Query: 16 IYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK--GRSFGYVDFFPSSHKSLSKLFSTY 73
I++GGL ++T+ D+ VFS GE+ +++V K G+S G+ +S +
Sbjct: 38 IFLGGLPYELTEGDIICVFSQYGEIVNINLVWDKKTGKSKGFCFLCYEDQRSTVLAVDNF 97
Query: 74 NGCVWKGGRLRLERAKEHYLA-------RLKREWAEDDAQLVNPPVTDS 115
NG KG +R++ + L + RE E PP + S
Sbjct: 98 NGIKIKGRTIRVDHVSNYRLPEDSEEMDEVTRELQERGCGTHTPPPSSS 146
>gi|218245224|ref|YP_002370595.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 8801]
gi|257058256|ref|YP_003136144.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 8802]
gi|218165702|gb|ACK64439.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 8801]
gi|256588422|gb|ACU99308.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 8802]
Length = 94
Score = 42.0 bits (97), Expect = 1.2, Method: Composition-based stats.
Identities = 28/77 (36%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 16 IYVGGLGEKVTDDDLAKVFSSLGEVKAVDIV--RTKGRSFGYVDFFPSSHKSLSKLFSTY 73
IYVG L +VT+ DL VF G VK V + R GR G+ S ST
Sbjct: 3 IYVGNLAYEVTEADLNSVFGEYGSVKRVHVPMDRDTGRMRGFAFVEMESPSQEDSAISTL 62
Query: 74 NGCVWKGGRLRLERAKE 90
+G W G L++ +A+E
Sbjct: 63 DGAEWMGRTLKVNKARE 79
>gi|427782335|gb|JAA56619.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 812
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 16 IYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK--GRSFGYV 56
I++GGL ++T+ D+ VFS GEV ++++R K G+S GY
Sbjct: 38 IFIGGLDYQLTEGDVICVFSQYGEVVNINLIRDKKTGKSKGYC 80
>gi|317025248|ref|XP_001388739.2| polyadenylate-binding protein, cytoplasmic and nuclear [Aspergillus
niger CBS 513.88]
gi|350637942|gb|EHA26298.1| hypothetical protein ASPNIDRAFT_46760 [Aspergillus niger ATCC 1015]
Length = 764
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 61/134 (45%), Gaps = 20/134 (14%)
Query: 1 MEKKEAEAEVEEQ----TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSF 53
+ KK+ +++ EE T +Y+ L ++ DD+ K+F GE+ + + R K R F
Sbjct: 218 ISKKDRQSKFEEMKANFTNVYIKNLDSEIDDDEFRKMFEKFGEITSATLSRDQEGKSRGF 277
Query: 54 GYVDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERA-----------KEHYLARLKREWAE 102
G+V+F S+H+S N + +L + RA K++ ARL++
Sbjct: 278 GFVNF--STHESAQAAVEEMNDKEIRSQKLYVGRAQKKHEREEELRKQYEAARLEKASKY 335
Query: 103 DDAQLVNPPVTDSV 116
L +TD +
Sbjct: 336 QGVNLYVKNLTDDI 349
>gi|335293857|ref|XP_003357073.1| PREDICTED: polyadenylate-binding protein 4-like [Sus scrofa]
Length = 370
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
Query: 3 KKEAEAEVE----EQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+K+ EAE++ E T +Y+ G+ + D+ L +VFS G+ +V ++R K + FG+
Sbjct: 175 RKDREAELQNKANEFTNVYIKNFGDDMDDERLKEVFSKYGKTLSVKVMRDSSGKSKGFGF 234
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERAKE 90
V F SH++ K NG G L + RA++
Sbjct: 235 VSF--DSHEAAKKAVEEMNGKDINGQLLFVGRAQK 267
>gi|158512764|sp|A2Q848.1|PABP_ASPNC RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|134054831|emb|CAK43671.1| unnamed protein product [Aspergillus niger]
Length = 731
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 9/99 (9%)
Query: 1 MEKKEAEAEVEEQ----TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSF 53
+ KK+ +++ EE T +Y+ L ++ DD+ K+F GE+ + + R K R F
Sbjct: 218 ISKKDRQSKFEEMKANFTNVYIKNLDSEIDDDEFRKMFEKFGEITSATLSRDQEGKSRGF 277
Query: 54 GYVDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERAKEHY 92
G+V+F S+H+S N + +L + RA++ +
Sbjct: 278 GFVNF--STHESAQAAVEEMNDKEIRSQKLYVGRAQKKH 314
>gi|260834392|ref|XP_002612195.1| hypothetical protein BRAFLDRAFT_125379 [Branchiostoma floridae]
gi|229297569|gb|EEN68204.1| hypothetical protein BRAFLDRAFT_125379 [Branchiostoma floridae]
Length = 418
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 16 IYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK--GRSFGYVDFFPSSHKSLSKLFSTY 73
++VGGL ++T+ D+ VFS GE+ +++VR K G+ G+ + KS +
Sbjct: 37 VFVGGLPYELTEGDVLCVFSQYGEIVNINMVRDKKTGKPKGFAFICYENQKSTVLAVDNF 96
Query: 74 NGCVWKGGRLRLERAKEHYLARLKREWAEDDAQLVNPPVTDSVAP 118
NG KG +R++ + R+ +E EDD + + VAP
Sbjct: 97 NGVKIKGRTIRVDHVSNY---RVPKEHEEDD-DITKKIRQEGVAP 137
>gi|428779944|ref|YP_007171730.1| RRM domain-containing RNA-binding protein [Dactylococcopsis
salina PCC 8305]
gi|428694223|gb|AFZ50373.1| RRM domain-containing RNA-binding protein [Dactylococcopsis
salina PCC 8305]
Length = 95
Score = 41.6 bits (96), Expect = 1.6, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 16 IYVGGLGEKVTDDDLAKVFSSLGEVKAV----DIVRTKGRSFGYVDFFPSSHKSLSKLFS 71
IYVG L VT DDL++VF+ G VK V D + R FG+V+ +S S S
Sbjct: 3 IYVGNLDYSVTQDDLSEVFAEYGTVKRVHLPTDRETGRMRGFGFVEM--ASETEESNAIS 60
Query: 72 TYNGCVWKGGRLRLERAK 89
+G W G L++ A+
Sbjct: 61 ELDGAEWMGRELKVNPAR 78
>gi|341892274|gb|EGT48209.1| hypothetical protein CAEBREN_24057 [Caenorhabditis brenneri]
Length = 302
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 16 IYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK--GRSFGYVDFFPSSHKSLSKLFSTY 73
IY+GGL +++ D+ VFS GEV V+++R K G+S G+ +S +
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNVNLIRDKDTGKSKGFAFLCYKDQRSTVLAVDNF 99
Query: 74 NGCVWKGGRLRLERAKEH 91
NG +R++ +++
Sbjct: 100 NGITLHKRMIRVDHVEKY 117
>gi|395644710|ref|ZP_10432570.1| RNP-1 like RNA-binding protein [Methanofollis liminatans DSM
4140]
gi|395441450|gb|EJG06207.1| RNP-1 like RNA-binding protein [Methanofollis liminatans DSM
4140]
Length = 86
Score = 41.6 bits (96), Expect = 2.0, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Query: 12 EQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKGRSFGYVDFFPSSHKSLSKLFS 71
E + +YVG L + T++ L+++FS+ G+VK+ I+ KG FG+V+F +S + K +
Sbjct: 2 ESSTLYVGNLNYETTEEQLSELFSAYGDVKSARIIPRKG--FGFVEF--ASVEEAEKAMN 57
Query: 72 TYNGCVWKGGRLRLERAK 89
N G LR++ A+
Sbjct: 58 ALNETQCMGRTLRIDEAR 75
>gi|302806382|ref|XP_002984941.1| hypothetical protein SELMODRAFT_7006 [Selaginella moellendorffii]
gi|300147527|gb|EFJ14191.1| hypothetical protein SELMODRAFT_7006 [Selaginella moellendorffii]
Length = 130
Score = 41.2 bits (95), Expect = 2.1, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Query: 2 EKKEAEAEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK--GRSFGYVDFF 59
E AE ++ I+ GGL ++ + D+ VF+ GEV V+++R K G+S GY
Sbjct: 24 ESASWHAEYKDSAYIFFGGLAYELNEGDILAVFAQYGEVVDVNLIRDKGTGKSKGYGFLA 83
Query: 60 PSSHKSLSKLFSTYNGCVWKGGRLRLERAK 89
+S + NG G LR++ +
Sbjct: 84 YEDQRSTTLAVDNLNGAQVAGRTLRVDHVR 113
>gi|302794524|ref|XP_002979026.1| hypothetical protein SELMODRAFT_6997 [Selaginella moellendorffii]
gi|300153344|gb|EFJ19983.1| hypothetical protein SELMODRAFT_6997 [Selaginella moellendorffii]
Length = 130
Score = 41.2 bits (95), Expect = 2.1, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Query: 2 EKKEAEAEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK--GRSFGYVDFF 59
E AE ++ I+ GGL ++ + D+ VF+ GEV V+++R K G+S GY
Sbjct: 24 ESASWHAEYKDSAYIFFGGLAYELNEGDILAVFAQYGEVVDVNLIRDKGTGKSKGYGFLA 83
Query: 60 PSSHKSLSKLFSTYNGCVWKGGRLRLERAK 89
+S + NG G LR++ +
Sbjct: 84 YEDQRSTTLAVDNLNGAQVAGRTLRVDHVR 113
>gi|296470918|tpg|DAA13033.1| TPA: RNA binding motif protein, X-linked 2-like protein [Bos
taurus]
Length = 417
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Query: 2 EKKEAEAEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK--GRSFGYVDFF 59
EK E ++ I++GGL ++T+ D+ VFS GE+ +++V K G+S G+
Sbjct: 111 EKVSWHNEYKDSAWIFLGGLPYELTEGDIICVFSQYGEIVNINLVWDKKTGKSKGFCFLC 170
Query: 60 PSSHKSLSKLFSTYNGCVWKGGRLRLERAKEHYL 93
+S +NG KG +R++ + L
Sbjct: 171 YEDQRSTVLAVDNFNGIKIKGRTIRVDHVSNYRL 204
>gi|330800733|ref|XP_003288388.1| hypothetical protein DICPUDRAFT_33993 [Dictyostelium purpureum]
gi|325081570|gb|EGC35081.1| hypothetical protein DICPUDRAFT_33993 [Dictyostelium purpureum]
Length = 121
Score = 41.2 bits (95), Expect = 2.4, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 8 AEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK--GRSFGYVDFFPSSHKS 65
A+ IYVGGL +T+ D+ +FS GE+ ++VR K G+S G+ + KS
Sbjct: 27 ADYSHSPYIYVGGLNFDLTEGDIISIFSQYGEISECNLVRNKETGKSQGFCFIGYDNQKS 86
Query: 66 LSKLFSTYNGCVWKGGRLRLERAKEH 91
+NG G ++++ K++
Sbjct: 87 TVLAVDNFNGIKVLGKTIKVDHVKDY 112
>gi|297283068|ref|XP_001113342.2| PREDICTED: polyadenylate-binding protein 4 [Macaca mulatta]
Length = 657
Score = 40.8 bits (94), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 8/104 (7%)
Query: 3 KKEAEAEV----EEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKGRSFGYVDF 58
+KE EAE+ +E T +Y+ GE+V D+ L ++FS VK + K + FG+V +
Sbjct: 176 RKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSKTLSVKVMRDPSGKSKGFGFVSY 235
Query: 59 FPSSHKSLSKLFSTYNGCVWKGGRLRLERA--KEHYLARLKREW 100
H+ +K NG G + + RA K A LKR++
Sbjct: 236 --EKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKF 277
>gi|170029925|ref|XP_001842841.1| l-caldesmon [Culex quinquefasciatus]
gi|167865301|gb|EDS28684.1| l-caldesmon [Culex quinquefasciatus]
Length = 563
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 15 RIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKGR-------SFGYVDFFPSSHKSLS 67
R++VG + ++ +L FSS G V+A+D+ ++K +F +V+ ++L
Sbjct: 5 RLFVGNIPGGTSEQELKNEFSSYGPVRAIDL-KSKANPLTGSDDTFAFVNI-DVDERTLR 62
Query: 68 KLFSTYNGCVWKGGRLRLERAKEHYLARL 96
+L + +KG L + RAKE +L RL
Sbjct: 63 QLLDEFRQERYKGVYLNVSRAKESFLDRL 91
>gi|389744512|gb|EIM85695.1| hypothetical protein STEHIDRAFT_169554 [Stereum hirsutum FP-91666
SS1]
Length = 349
Score = 40.8 bits (94), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 5/106 (4%)
Query: 9 EVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK--GRSFGYVDFFPSSHKSL 66
E ++ I++GGL ++T+ D+ +FS GEV V++ R+K G++ G+ +S
Sbjct: 27 EYKDSAYIFIGGLNYELTEGDVIAIFSQYGEVMDVNLPRSKETGKTKGFGFLMYEDQRST 86
Query: 67 SKLFSTYNGCVWKGGRLRLERAKEHYLARLK---REWAEDDAQLVN 109
NG LR++ K + + K EW E + Q +N
Sbjct: 87 ILAVDNLNGAQVLERTLRVDHVKNYKQPKNKGEDGEWVESEEQSLN 132
>gi|340914665|gb|EGS18006.1| hypothetical protein CTHT_0060190 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 539
Score = 40.4 bits (93), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 3 KKEAEAEVEEQTR-IYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK----GRSFGYVD 57
K +A A+ E+T ++VG LG V D L + F + + + +V K R FGYVD
Sbjct: 293 KGDANAQTSEKTATLWVGNLGWAVDDKALYEEFENCEGIVSARVVTDKDSRRSRGFGYVD 352
Query: 58 FFPSSHKSLSKLFSTYNGCVWKGGRLRLERA 88
F +S + K ++ NG +G +RL+ A
Sbjct: 353 F--TSPDAAEKAYNEKNGAHLQGREMRLDFA 381
>gi|307353314|ref|YP_003894365.1| RNP-1 like RNA-binding protein [Methanoplanus petrolearius DSM
11571]
gi|307156547|gb|ADN35927.1| RNP-1 like RNA-binding protein [Methanoplanus petrolearius DSM
11571]
Length = 87
Score = 40.0 bits (92), Expect = 4.8, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 4/78 (5%)
Query: 12 EQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTKGRSFGYVDFFPSSHKSLSKLFS 71
E +++YVG L VT+ L ++FS G+VK+V I+ KG FG+V+ S + K +
Sbjct: 2 ETSKLYVGNLTYSVTEKQLEELFSQYGDVKSVRIIERKG--FGFVEM--GSAEEAEKAMA 57
Query: 72 TYNGCVWKGGRLRLERAK 89
N ++G +R++ A+
Sbjct: 58 ALNETEYEGRTMRIDEAR 75
>gi|121705054|ref|XP_001270790.1| ribonucleoprotein, chloroplast [Aspergillus clavatus NRRL 1]
gi|119398936|gb|EAW09364.1| ribonucleoprotein, chloroplast [Aspergillus clavatus NRRL 1]
Length = 514
Score = 39.7 bits (91), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 4 KEAEAEVEEQTRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIV--RTKGRS--FGYVDF 58
K+AE E +++G L V +D L + F + GE+ V IV R GRS FGYV++
Sbjct: 250 KQAEEETGASANLFIGNLSWNVDEDWLRQEFETFGELSGVRIVTDRDSGRSRGFGYVEY 308
>gi|157823445|ref|NP_001099899.1| polyadenylate-binding protein 4-like [Rattus norvegicus]
gi|149027259|gb|EDL82942.1| rCG37805 [Rattus norvegicus]
Length = 370
Score = 39.3 bits (90), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 9/95 (9%)
Query: 3 KKEAEAEVEEQ----TRIYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVR---TKGRSFGY 55
+K+ EAE+ E+ T +Y+ G+ + D+ L VFS G+ +V +++ K + FG+
Sbjct: 175 RKDREAELREKPAEFTNVYIKNFGDDMDDESLRSVFSKYGQTLSVKVMKDASGKSKRFGF 234
Query: 56 VDFFPSSHKSLSKLFSTYNGCVWKGGRLRLERAKE 90
V F SHK+ NG G + + RA++
Sbjct: 235 VSF--DSHKAAKNAVEDMNGRDINGQTIFVGRAQK 267
>gi|403358378|gb|EJY78834.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 403
Score = 39.3 bits (90), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 5/91 (5%)
Query: 16 IYVGGLGEKVTDDDLAKVFSSLGEVKAVDIVRTK--GRSFGYVDFFPSSHKSLSKLFSTY 73
IY+GGL ++ + D+A VFS GEV + R + G+S G+ KS
Sbjct: 35 IYIGGLNYRMNEGDIAIVFSQFGEVVDCRLARDQKTGKSKGFAFLAYEDQKSTVLAVDNL 94
Query: 74 NGCVWKGGRLRLERAKEHYLARLKREWAEDD 104
NG G + ++ ++ ++ RE+ E D
Sbjct: 95 NGIDLCGRLISVDHVMQY---KIPREYLETD 122
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.307 0.124 0.344
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,460,330,069
Number of Sequences: 23463169
Number of extensions: 532728694
Number of successful extensions: 1546737
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 290
Number of HSP's successfully gapped in prelim test: 8885
Number of HSP's that attempted gapping in prelim test: 1511181
Number of HSP's gapped (non-prelim): 30752
length of query: 800
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 649
effective length of database: 8,816,256,848
effective search space: 5721750694352
effective search space used: 5721750694352
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 81 (35.8 bits)