BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003718
(800 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8BMD7|MORC4_MOUSE MORC family CW-type zinc finger protein 4 OS=Mus musculus GN=Morc4
PE=2 SV=2
Length = 928
Score = 207 bits (528), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 140/419 (33%), Positives = 220/419 (52%), Gaps = 40/419 (9%)
Query: 138 VHPKFLHSNATSHKWALGAFAELLDNSLDEVCNGATYSNIDMLINRKDGSRMLLIEDNGG 197
+ P++L SN++SH A AELLDN++D + T ID+ +K L D+G
Sbjct: 35 MSPRYLQSNSSSHTRPFSAIAELLDNAVDPDVSARTVF-IDVEEVKKKPC--LTFTDDGC 91
Query: 198 GMNPDKMRHCMSLGYSAK--SKAANTIGQYGNGFKTSTMRLGADVIVFSCCCGKDGKSPT 255
GM P K+ +S G++ K K+ IG +GNGFK+ +MRLG D +VF+ K+G T
Sbjct: 92 GMTPHKLHRMLSFGFTDKVIKKSQRPIGVFGNGFKSGSMRLGKDALVFT----KNGN--T 145
Query: 256 RSIGLLSYTFLRSTGKEDIVVPMLDYEGSQQEWKKIIRSSLDDWNRNVETIVQWSPFSSE 315
++GLLS T+L + ++VP++ + SQQ K I+ +D ++E I+ +S F+ E
Sbjct: 146 LAVGLLSQTYLECIQAQAVIVPIVPF--SQQNKKMIV---TEDSLPSLEAILNYSIFNCE 200
Query: 316 ADLLHQFNLMK-DHGTRIIIYNLWEDDQGLLELDFDSDKHDIQLRGVNRDEQNIK-MAQH 373
DLL QF+ + GTR++I+N+ + G ELDFD+D++DI + + +E+ I +
Sbjct: 201 KDLLSQFDAIPGKKGTRVLIWNIRRNKDGKSELDFDTDQYDILVSDFDAEEKEIGGVTSE 260
Query: 374 YPNSRHFLTYRHSLRSYASILYLRLPPGFRIIIRGKDVEHHNIVNDMMLSKKVTYRPQPG 433
P + + SLR++ SILY++ P +I +R K V I + + Y+P
Sbjct: 261 LPETEY------SLRAFCSILYMK--PRMKIFLRQKKVTTQMIAKSLANVEYDIYKP--- 309
Query: 434 ASGIPTDLHMAVDVTIGFVKDAKHHIDVQGFNVYHKNRLIKPFWRL---WNASGSDGRGV 490
T + V +T GF K+H G +YH NRLIK F + + +G GV
Sbjct: 310 -----TSTNKQVRITFGF--SCKYHNQF-GVMMYHNNRLIKAFEKAGCQLKPTCGEGVGV 361
Query: 491 IGVLEANFVEPAHDKQGFERTTVLARLEARLIQMQKDYWNNNCHEIGYAPRRYKKYIKD 549
IGV+E NF++PA++KQ FE T L + YW + + P + I D
Sbjct: 362 IGVIECNFLKPAYNKQDFEYTKEYRLTINALARKLNAYWKEKISQENFEPLPTSRRIPD 420
>sp|Q14149|MORC3_HUMAN MORC family CW-type zinc finger protein 3 OS=Homo sapiens GN=MORC3
PE=1 SV=3
Length = 939
Score = 206 bits (525), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 142/406 (34%), Positives = 211/406 (51%), Gaps = 53/406 (13%)
Query: 140 PKFLHSNATSHKWALGAFAELLDNSLDEVCNGATYSNIDMLINRKDGSRMLLIEDNGGGM 199
PKFLH+N+TSH W A AEL+DN+ D N +IN L DNG GM
Sbjct: 16 PKFLHTNSTSHTWPFSAVAELIDNAYDPDVNAKQIWIDKTVIN---DHICLTFTDNGNGM 72
Query: 200 NPDKMRHCMSLGYSAKSKAAN--TIGQYGNGFKTSTMRLGADVIVFSCCCGKDGKSPTRS 257
DK+ +S G+S K +G YGNGFK+ +MRLG D IVF+ K+G+S S
Sbjct: 73 TSDKLHKMLSFGFSDKVTMNGHVPVGLYGNGFKSGSMRLGKDAIVFT----KNGES--MS 126
Query: 258 IGLLSYTFLRSTGKEDIVVPMLDYEGSQQEWKKIIRSSLDDWNRNVETIVQWSPFSSEAD 317
+GLLS T+L E +VVP++ + +Q +L + ++ I++ S FS+E
Sbjct: 127 VGLLSQTYLEVIKAEHVVVPIVAFNKHRQ------MINLAESKASLAAILEHSLFSTEQK 180
Query: 318 LLHQFN-LMKDHGTRIIIYNLWEDDQGLLELDFDSDKHDIQL----------RGVNRDEQ 366
LL + + ++ GTRIII+NL + E DF+ DK+DI++ +G + E
Sbjct: 181 LLAELDAIIGKKGTRIIIWNL-RSYKNATEFDFEKDKYDIRIPEDLDEITGKKGYKKQE- 238
Query: 367 NIKMAQHYPNSRHFLTYRHSLRSYASILYLRLPPGFRIIIRGKDVEHHNIVNDMMLSKKV 426
+M Q P S +SLR+Y SILYL+ P +II+RG+ V+ + + ++
Sbjct: 239 --RMDQIAPES------DYSLRAYCSILYLK--PRMQIILRGQKVKTQLVSKSLAYIERD 288
Query: 427 TYRPQPGASGIPTDLHMAVDVTIGFVKDAKHHIDVQGFNVYHKNRLIKPFWRLWNA--SG 484
YRP+ L V +T GF K H G +YH+NRLIK + ++ +
Sbjct: 289 VYRPKF--------LSKTVRITFGFNCRNKDHY---GIMMYHRNRLIKAYEKVGCQLRAN 337
Query: 485 SDGRGVIGVLEANFVEPAHDKQGFERTTVLARLEARLIQMQKDYWN 530
+ G GV+G++E NF++P H+KQ F+ T L + DYWN
Sbjct: 338 NMGVGVVGIIECNFLKPTHNKQDFDYTNEYRLTITALGEKLNDYWN 383
>sp|Q8TE76|MORC4_HUMAN MORC family CW-type zinc finger protein 4 OS=Homo sapiens GN=MORC4
PE=1 SV=2
Length = 937
Score = 201 bits (512), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 137/416 (32%), Positives = 220/416 (52%), Gaps = 44/416 (10%)
Query: 122 PSGGWEFSTGGMDHVRVHPKFLHSNATSHKWALGAFAELLDNSLD-EVCNGATYSNIDML 180
P GG + G+ + P++L SN++SH A AELLDN++D +V + +++ +
Sbjct: 21 PGGGPQ--AFGIRLSTMSPRYLQSNSSSHTRPFSAIAELLDNAVDPDVSARTVFIDVEEV 78
Query: 181 INRKDGSRMLLIEDNGGGMNPDKMRHCMSLGYSAK--SKAANTIGQYGNGFKTSTMRLGA 238
N+ L D+G GM P K+ +S G++ K K+ IG +GNGFK+ +MRLG
Sbjct: 79 KNKS----CLTFTDDGCGMTPHKLHRMLSFGFTDKVIKKSQCPIGVFGNGFKSGSMRLGK 134
Query: 239 DVIVFSCCCGKDGKSPTRSIGLLSYTFLRSTGKEDIVVPMLDYEGSQQEWKKIIRSSLDD 298
D +VF+ K+G T ++GLLS T+L + ++VP++ + +QQ K II +D
Sbjct: 135 DALVFT----KNGG--TLTVGLLSQTYLECVQAQAVIVPIVPF--NQQNKKMII---TED 183
Query: 299 WNRNVETIVQWSPFSSEADLLHQFNLMK-DHGTRIIIYNLWEDDQGLLELDFDSDKHDIQ 357
++E I+ +S F+ E DLL QF+ + GTR++I+N+ + G ELDFD+D++DI
Sbjct: 184 SLPSLEAILNYSIFNRENDLLAQFDAIPGKKGTRVLIWNIRRNKNGKSELDFDTDQYDIL 243
Query: 358 LRGVNRDEQNIK-MAQHYPNSRHFLTYRHSLRSYASILYLRLPPGFRIIIRGKDVEHHNI 416
+ + +E+ + P + + SLR++ ILY++ P +I +R K V I
Sbjct: 244 VSDFDTEEKMTGGVTSELPETEY------SLRAFCGILYMK--PRMKIFLRQKKVTTQMI 295
Query: 417 VNDMMLSKKVTYRPQPGASGIPTDLHMAVDVTIGFVKDAKHHIDVQGFNVYHKNRLIKPF 476
+ + TY+P T + V +T GF + G +YH NRLIK F
Sbjct: 296 AKSLANVEYDTYKP--------TFTNKQVRITFGFSCKNSNQF---GIMMYHNNRLIKSF 344
Query: 477 WRL---WNASGSDGRGVIGVLEANFVEPAHDKQGFERTTVLARLEARLIQMQKDYW 529
++ + +G GVIGV+E NF++PA++KQ FE T L Q YW
Sbjct: 345 EKVGCQVKPTRGEGVGVIGVIECNFLKPAYNKQDFEYTKEYRLTINALAQKLNAYW 400
>sp|Q9WVL5|MORC1_MOUSE MORC family CW-type zinc finger protein 1 OS=Mus musculus GN=Morc1
PE=2 SV=1
Length = 950
Score = 146 bits (368), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 123/477 (25%), Positives = 200/477 (41%), Gaps = 106/477 (22%)
Query: 133 MDHVRVHPKFLHSNATSHKWALGAFAELLDNSLDEVCNGATYSNIDMLINRK-DGSRMLL 191
+ ++H F+H+N+T+H + GA AELLDN+ D GA ++ + N G ML
Sbjct: 7 LQRAKLHLDFIHANSTTHSFLFGALAELLDNARDA---GAVRLDVFSVDNETLQGGFMLC 63
Query: 192 IEDNGGGMNPDKMRHCMSLGYSAKSKAA-NTIGQYGNGFKTSTMRLGADVIVFSCCCGKD 250
D+G GM+PD+ + G S K + IGQYGNG K+ +MR+G D I+F+
Sbjct: 64 FLDDGCGMSPDEASDVIYFGTSKKRLSTLKFIGQYGNGLKSGSMRIGKDCILFT------ 117
Query: 251 GKSPTRSIGLLSYTFLRSTGKEDIVVPMLDYEGSQQEWKKIIRSSLDD----WNRNVETI 306
K T + S TF G ++VVP+ W R S+ D + + I
Sbjct: 118 KKEETMTCLFFSQTFCEKEGLTEVVVPI-------PSWLTRTRESITDDPQKFFTELSII 170
Query: 307 VQWSPFSSEADLLHQFNLMKDH-GTRIIIYNLWEDDQGLLELDFDSDKHDIQLRGVNRDE 365
++SPF +EA+L+ QF+++ GT +IIYNL G ELD +DK DI +
Sbjct: 171 FKYSPFKTEAELMQQFDMIYGRCGTLLIIYNLKLLLSGEPELDVTTDKEDILM------- 223
Query: 366 QNIKMAQHYPNSRHFLTYRHSLRSYASILYLRLPPGFRIIIRGKDVEHHNIVNDMMLSKK 425
+ + P R F R+Y ++LY P +I I+ K V+ ++ + +K
Sbjct: 224 --AEAPEEIPERRSF-------RAYTAVLYFE--PRMKIFIQAKRVQTKHLCYSLYKPRK 272
Query: 426 VTYRPQPGASGIPTDLH-------------------------MAVDVTIGFVKDAKHHID 460
Y T++ +A+ T ++ A +D
Sbjct: 273 YQYTTSSFKGKFKTEVQKAEEAVKRAELLFKEVQAKVNQPDRIALSSTQDALQKALQDVD 332
Query: 461 VQ-------------------------------GFNVYHKNRLIKPFWRL---WNASGSD 486
+ G +Y NRLIK + ++
Sbjct: 333 TKHKSLRQKQRALRKARTLSLFFGVNTEDQHQAGMFIYSNNRLIKMYEKVGPQLKMKSLL 392
Query: 487 GRGVIGVLEANF--VEPAHDKQGFERTTVLARLEARLIQMQKDYWNNNCHEIGYAPR 541
G G+IG++ +EP+H+KQ F + + L+++ Y C +IG + R
Sbjct: 393 GAGIIGIVNIPLETMEPSHNKQEF----LNVQEYNHLLKVMGQYLIQYCKDIGISNR 445
>sp|Q9Y6X9|MORC2_HUMAN MORC family CW-type zinc finger protein 2 OS=Homo sapiens GN=MORC2
PE=1 SV=2
Length = 1032
Score = 146 bits (368), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 150/291 (51%), Gaps = 35/291 (12%)
Query: 131 GGMDHVRVHPKFLHSNATSHKWALGAFAELLDNSLDEVCNGATYSNIDMLINRKD---GS 187
++ ++ ++LH+N+T+H++ GA AEL+DN+ D A + ID+ R++ G
Sbjct: 7 SSLNRAQLTFEYLHTNSTTHEFLFGALAELVDNARD-----ADATRIDIYAERREDLRGG 61
Query: 188 RMLLIEDNGGGMNPDKMRHCMSLGYSAKSKAANT-IGQYGNGFKTSTMRLGADVIVFSCC 246
ML D+G GM+P + G SAK +T IGQYGNG K+ +MR+G D I+F+
Sbjct: 62 FMLCFLDDGAGMDPSDAASVIQFGKSAKRTPESTQIGQYGNGLKSGSMRIGKDFILFT-- 119
Query: 247 CGKDGKSPTRSIGLLSYTFLRSTGKEDIVVPMLDYEGSQQEWKKIIRSSLDDWNRNVETI 306
K T + LS TF G ++++VP+ + +E + +++ + E I
Sbjct: 120 ----KKEDTMTCLFLSRTFHEEEGIDEVIVPLPTWNARTRE---PVTDNVEKFAIETELI 172
Query: 307 VQWSPFSSEADLLHQF-NLMKDHGTRIIIYNLWEDDQGLLELDFDSDKHDIQLRGVNRDE 365
++SPF +E +++ QF + D GT +II+NL D G ELD S+ DIQ
Sbjct: 173 YKYSPFRTEEEVMTQFMKIPGDSGTLVIIFNLKLMDNGEPELDIISNPRDIQ-------- 224
Query: 366 QNIKMAQHYPNSRHFLTYRHSLRSYASILYLRLPPGFRIIIRGKDVEHHNI 416
MA+ P R S R+YA++LY+ P RI I G V+ +
Sbjct: 225 ----MAETSPEGTK--PERRSFRAYAAVLYID--PRMRIFIHGHKVQTKRL 267
>sp|Q86VD1|MORC1_HUMAN MORC family CW-type zinc finger protein 1 OS=Homo sapiens GN=MORC1
PE=2 SV=2
Length = 984
Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 134/485 (27%), Positives = 204/485 (42%), Gaps = 112/485 (23%)
Query: 132 GMDHVRVHPKFLHSNATSHKWALGAFAELLDNSLDEVCNGATYSNIDMLINRK-DGSRML 190
+ ++ F+H+N+T+H + GA AELLDN+ D GA ++ + N K G ML
Sbjct: 7 ALQRAQLRLDFIHANSTTHSFLFGALAELLDNARDA---GAERLDVFSVDNEKLQGGFML 63
Query: 191 LIEDNGGGMNPDKMRHCMSLGYSAKSKAA-NTIGQYGNGFKTSTMRLGADVIVFSCCCGK 249
D+G GM+P++ + G S K + IGQYGNG K+ +MR+G D I+F+
Sbjct: 64 CFLDDGCGMSPEEASDIIYFGRSKKRLSTLKFIGQYGNGLKSGSMRIGKDFILFT----- 118
Query: 250 DGKSPTRSIGLLSYTFLRSTGKEDIVVPMLDYEGSQQEWKKIIRSSLDD----WNRNVET 305
K T + S TF ++VVPM W R S+ D + +
Sbjct: 119 -KKEETMTCVFFSQTFCEEESLSEVVVPM-------PSWLIRTRESVTDDPQKFAMELSI 170
Query: 306 IVQWSPFSSEADLLHQFNLMKDH-GTRIIIYNLWEDDQGLLELDFDSDKHDIQLRGVNRD 364
I ++SPF +EA+L+ QF+++ GT ++IYNL G ELD +DK DI + G D
Sbjct: 171 IYKYSPFKTEAELMQQFDVIYGKCGTLLVIYNLKLLLNGEPELDVKTDKEDILMAGALED 230
Query: 365 EQNIKMAQHYPNSRHFLTYRHSLRSYASILYLRLPPGFRIIIRGKDVEHHNIVNDMMLSK 424
+P R S R+Y S+LY P RI I+ K V+ ++ + +
Sbjct: 231 ---------FPA-------RWSFRAYTSVLYFN--PWMRIFIQAKRVKTKHLCYCLYRPR 272
Query: 425 KVTYRPQPGASGIPTDLHM---AVDVTIGFVKDAKHHI--------------------DV 461
K Y ++ AV + +K+A+ + DV
Sbjct: 273 KYLYVTSSFKGAFKDEVKKAEEAVKIAESILKEAQIKVNQCDRTSLSSAKDVLQRALEDV 332
Query: 462 Q-----------------------GFNV----------YHKNRLIKPFWRL---WNASGS 485
+ G NV Y NRLIK ++
Sbjct: 333 EAKQKNLKEKQRELKTARTLSLFYGVNVENRSQAGMFIYSNNRLIKMHEKVGSQLKLKSL 392
Query: 486 DGRGVIGVLEA--NFVEPAHDKQGF----ERTTVLARLEARLIQMQKDYWNNN------C 533
G GV+G++ +EP+H+KQ F E +L + L+Q KD NN C
Sbjct: 393 LGAGVVGIVNIPLEVMEPSHNKQEFLNVQEYNHLLKVMGQYLVQYCKDTGINNRNLTLFC 452
Query: 534 HEIGY 538
+E GY
Sbjct: 453 NEFGY 457
>sp|Q69ZX6|MOR2A_MOUSE MORC family CW-type zinc finger protein 2A OS=Mus musculus
GN=Morc2a PE=1 SV=2
Length = 1030
Score = 143 bits (361), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 93/281 (33%), Positives = 146/281 (51%), Gaps = 35/281 (12%)
Query: 141 KFLHSNATSHKWALGAFAELLDNSLDEVCNGATYSNIDMLINRKD---GSRMLLIEDNGG 197
++LH+N+T+H++ GA AEL+DN+ D A + ID+ R++ G ML D+G
Sbjct: 17 EYLHTNSTTHEFLFGALAELVDNARD-----ADATRIDIYAERREDLRGGFMLCFLDDGA 71
Query: 198 GMNPDKMRHCMSLGYSAKSKAANT-IGQYGNGFKTSTMRLGADVIVFSCCCGKDGKSPTR 256
GM+P + G SAK +T IGQYGNG K+ +MR+G D I+F+ K T
Sbjct: 72 GMDPSDAASVIQFGKSAKRTPESTQIGQYGNGLKSGSMRIGKDFILFT------KKEDTM 125
Query: 257 SIGLLSYTFLRSTGKEDIVVPMLDYEGSQQEWKKIIRSSLDDWNRNVETIVQWSPFSSEA 316
+ LS TF G ++++VP+ + +E I +++ + E + ++SPF +E
Sbjct: 126 TCLFLSRTFHEEEGIDEVIVPLPTWNARTRE---PITDNVEKFAIETELVYKYSPFHTEE 182
Query: 317 DLLHQF-NLMKDHGTRIIIYNLWEDDQGLLELDFDSDKHDIQLRGVNRDEQNIKMAQHYP 375
+++QF + + GT +II+NL D G ELD S+ DIQ MA+ P
Sbjct: 183 QVMNQFMKIPGNSGTLVIIFNLKLMDNGEPELDIISNPKDIQ------------MAETSP 230
Query: 376 NSRHFLTYRHSLRSYASILYLRLPPGFRIIIRGKDVEHHNI 416
R S R+YA++LY+ P RI I G V+ +
Sbjct: 231 EGTK--PERRSFRAYAAVLYID--PRMRIFIHGHKVQTKRL 267
>sp|Q8C5W4|MOR2B_MOUSE MORC family CW-type zinc finger protein 2B OS=Mus musculus
GN=Morc2b PE=2 SV=2
Length = 1022
Score = 142 bits (359), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 154/292 (52%), Gaps = 35/292 (11%)
Query: 142 FLHSNATSHKWALGAFAELLDNSLDEVCNGATYSNIDMLINRKD---GSRMLLIEDNGGG 198
+LH+N+T+H + GA AEL+DN+ D A + ID+ +++ G ML DNG G
Sbjct: 18 YLHTNSTTHAFLFGALAELIDNARD-----ADATRIDIYAEKREDLQGGFMLCFLDNGVG 72
Query: 199 MNPDKMRHCMSLGYSAKSKAANT-IGQYGNGFKTSTMRLGADVIVFSCCCGKDGKSPTRS 257
M+P+ + + + G SAK +T IG+YGNG K+ +MR+G D I+F+ K T S
Sbjct: 73 MDPNDVINVIQFGKSAKRTPESTQIGRYGNGLKSGSMRIGKDFILFT------KKENTMS 126
Query: 258 IGLLSYTFLRSTGKEDIVVPMLDYEGSQQEWKKIIRSSLDDWNRNVETIVQWSPFSSEAD 317
LS TF G ++++VP+ + +E + +++ + E I ++SPF +E +
Sbjct: 127 CLFLSRTFHEEEGIDEVIVPLPTWNSQTRE---PVTDNMEKFAIETELIYKYSPFHTEEE 183
Query: 318 LLHQFNLMK-DHGTRIIIYNLWEDDQGLLELDFDSDKHDIQLRGVNRDEQNIKMAQHYPN 376
++ QF + GT ++I+NL D G ELD S+ DI++ ++ ++ +K
Sbjct: 184 VMTQFTKISGTSGTLVVIFNLKLTDNGEPELDVTSNPKDIRMAEIS--QEGVK------- 234
Query: 377 SRHFLTYRHSLRSYASILYLRLPPGFRIIIRGKDVEHHNIVNDMMLSKKVTY 428
RHS +YA++LY+ P RI I G V+ + + +K T+
Sbjct: 235 -----PERHSFCAYAAVLYID--PRMRIFIHGHKVQTKKLCCCLYKPRKYTF 279
>sp|C0QSY6|MUTL_PERMH DNA mismatch repair protein MutL OS=Persephonella marina (strain
DSM 14350 / EX-H1) GN=mutL PE=3 SV=1
Length = 520
Score = 42.7 bits (99), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 113/265 (42%), Gaps = 27/265 (10%)
Query: 156 AFAELLDNSLDEVCNGATYSNIDMLINRKDGSRMLLIEDNGGGMNPDKMRHCMSLGYSAK 215
EL++N++D A ID+ I K G R++ + DNG G++PD M C+ ++K
Sbjct: 27 VLKELIENAID-----AGSDRIDIFIE-KGGKRLIQVVDNGEGIHPDDMLDCVKRYTTSK 80
Query: 216 SKAAN---TIGQYGNGFKTSTMRLGADVIVFSCCCGKDGKSPTRSI---GLLSYTFLRST 269
+ + +I Y GF+ + + V FS + S + + G + +F +
Sbjct: 81 ISSEDDLYSISSY--GFRGEALYSISSVSKFSIVSRPEDLSVGKELYIEGGVFRSFTETG 138
Query: 270 GKEDIVVPMLDYEGSQQEWKKIIRSSLDDWNRNVETIVQWSPFSSEAD--LLHQ----FN 323
V + D + KK ++S ++ ++T + ++ +++ L H N
Sbjct: 139 APVGTKVRVKDIFFNTPVRKKFLKSERTEFVHCLKTFINYAVVNTDIHFRLYHNGRELMN 198
Query: 324 LMKDHGTRIIIYNLWEDDQGLLELDFDSDKHDIQLRGVNRDEQNIKMAQHYPNSRHFLT- 382
L + I Y E LLELD+ + I ++ DE+ K Y N R
Sbjct: 199 LPPSDLKKRITYIYPELSGRLLELDYTDETGRIY-GYISTDERFKKEGIVYVNKRPVKNR 257
Query: 383 -YRHSLRSYAS----ILYLRLPPGF 402
R ++S S +L++ LPP F
Sbjct: 258 ELRKIIKSLISEKFYVLFIELPPYF 282
>sp|Q6G9K5|PARE_STAAS DNA topoisomerase 4 subunit B OS=Staphylococcus aureus (strain
MSSA476) GN=parE PE=3 SV=2
Length = 663
Score = 42.4 bits (98), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 59/114 (51%), Gaps = 11/114 (9%)
Query: 132 GMDHVRVHPKFLHSNATSHKWALGAFAELLDNSLDEVCNGATYSN-IDMLINRKDGSRML 190
G++ VR P ++ +T + E++DNS+DEV NG Y N ID+ IN KDGS +
Sbjct: 17 GLEAVRKRPG-MYIGSTDKRGLHHLVYEIVDNSVDEVLNG--YGNEIDVTIN-KDGS--I 70
Query: 191 LIEDNGGGMNPDKMRHCMSLGYSAKSKAANTIGQYGN-GFKTS--TMRLGADVI 241
IEDNG GM P + + G++G G+KTS +GA V+
Sbjct: 71 SIEDNGRGM-PTGIHKSGKPTVEVIFTVLHAGGKFGQGGYKTSGGLHGVGASVV 123
>sp|P66939|PARE_STAAN DNA topoisomerase 4 subunit B OS=Staphylococcus aureus (strain
N315) GN=parE PE=1 SV=1
Length = 663
Score = 42.4 bits (98), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 59/114 (51%), Gaps = 11/114 (9%)
Query: 132 GMDHVRVHPKFLHSNATSHKWALGAFAELLDNSLDEVCNGATYSN-IDMLINRKDGSRML 190
G++ VR P ++ +T + E++DNS+DEV NG Y N ID+ IN KDGS +
Sbjct: 17 GLEAVRKRPG-MYIGSTDKRGLHHLVYEIVDNSVDEVLNG--YGNEIDVTIN-KDGS--I 70
Query: 191 LIEDNGGGMNPDKMRHCMSLGYSAKSKAANTIGQYGN-GFKTS--TMRLGADVI 241
IEDNG GM P + + G++G G+KTS +GA V+
Sbjct: 71 SIEDNGRGM-PTGIHKSGKPTVEVIFTVLHAGGKFGQGGYKTSGGLHGVGASVV 123
>sp|P66938|PARE_STAAM DNA topoisomerase 4 subunit B OS=Staphylococcus aureus (strain Mu50
/ ATCC 700699) GN=parE PE=3 SV=1
Length = 663
Score = 42.4 bits (98), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 59/114 (51%), Gaps = 11/114 (9%)
Query: 132 GMDHVRVHPKFLHSNATSHKWALGAFAELLDNSLDEVCNGATYSN-IDMLINRKDGSRML 190
G++ VR P ++ +T + E++DNS+DEV NG Y N ID+ IN KDGS +
Sbjct: 17 GLEAVRKRPG-MYIGSTDKRGLHHLVYEIVDNSVDEVLNG--YGNEIDVTIN-KDGS--I 70
Query: 191 LIEDNGGGMNPDKMRHCMSLGYSAKSKAANTIGQYGN-GFKTS--TMRLGADVI 241
IEDNG GM P + + G++G G+KTS +GA V+
Sbjct: 71 SIEDNGRGM-PTGIHKSGKPTVEVIFTVLHAGGKFGQGGYKTSGGLHGVGASVV 123
>sp|P0A0K9|PARE_STAAW DNA topoisomerase 4 subunit B OS=Staphylococcus aureus (strain MW2)
GN=parE PE=3 SV=1
Length = 663
Score = 42.4 bits (98), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 59/114 (51%), Gaps = 11/114 (9%)
Query: 132 GMDHVRVHPKFLHSNATSHKWALGAFAELLDNSLDEVCNGATYSN-IDMLINRKDGSRML 190
G++ VR P ++ +T + E++DNS+DEV NG Y N ID+ IN KDGS +
Sbjct: 17 GLEAVRKRPG-MYIGSTDKRGLHHLVYEIVDNSVDEVLNG--YGNEIDVTIN-KDGS--I 70
Query: 191 LIEDNGGGMNPDKMRHCMSLGYSAKSKAANTIGQYGN-GFKTS--TMRLGADVI 241
IEDNG GM P + + G++G G+KTS +GA V+
Sbjct: 71 SIEDNGRGM-PTGIHKSGKPTVEVIFTVLHAGGKFGQGGYKTSGGLHGVGASVV 123
>sp|P0C1S7|PARE_STAAU DNA topoisomerase 4 subunit B OS=Staphylococcus aureus GN=parE PE=3
SV=1
Length = 663
Score = 42.4 bits (98), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 59/114 (51%), Gaps = 11/114 (9%)
Query: 132 GMDHVRVHPKFLHSNATSHKWALGAFAELLDNSLDEVCNGATYSN-IDMLINRKDGSRML 190
G++ VR P ++ +T + E++DNS+DEV NG Y N ID+ IN KDGS +
Sbjct: 17 GLEAVRKRPG-MYIGSTDKRGLHHLVYEIVDNSVDEVLNG--YGNEIDVTIN-KDGS--I 70
Query: 191 LIEDNGGGMNPDKMRHCMSLGYSAKSKAANTIGQYGN-GFKTS--TMRLGADVI 241
IEDNG GM P + + G++G G+KTS +GA V+
Sbjct: 71 SIEDNGRGM-PTGIHKSGKPTVEVIFTVLHAGGKFGQGGYKTSGGLHGVGASVV 123
>sp|Q5HG65|PARE_STAAC DNA topoisomerase 4 subunit B OS=Staphylococcus aureus (strain COL)
GN=parE PE=3 SV=2
Length = 663
Score = 42.4 bits (98), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 59/114 (51%), Gaps = 11/114 (9%)
Query: 132 GMDHVRVHPKFLHSNATSHKWALGAFAELLDNSLDEVCNGATYSN-IDMLINRKDGSRML 190
G++ VR P ++ +T + E++DNS+DEV NG Y N ID+ IN KDGS +
Sbjct: 17 GLEAVRKRPG-MYIGSTDKRGLHHLVYEIVDNSVDEVLNG--YGNEIDVTIN-KDGS--I 70
Query: 191 LIEDNGGGMNPDKMRHCMSLGYSAKSKAANTIGQYGN-GFKTS--TMRLGADVI 241
IEDNG GM P + + G++G G+KTS +GA V+
Sbjct: 71 SIEDNGRGM-PTGIHKSGKPTVEVIFTVLHAGGKFGQGGYKTSGGLHGVGASVV 123
>sp|Q2FYS5|PARE_STAA8 DNA topoisomerase 4 subunit B OS=Staphylococcus aureus (strain NCTC
8325) GN=parE PE=3 SV=1
Length = 663
Score = 42.4 bits (98), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 59/114 (51%), Gaps = 11/114 (9%)
Query: 132 GMDHVRVHPKFLHSNATSHKWALGAFAELLDNSLDEVCNGATYSN-IDMLINRKDGSRML 190
G++ VR P ++ +T + E++DNS+DEV NG Y N ID+ IN KDGS +
Sbjct: 17 GLEAVRKRPG-MYIGSTDKRGLHHLVYEIVDNSVDEVLNG--YGNEIDVTIN-KDGS--I 70
Query: 191 LIEDNGGGMNPDKMRHCMSLGYSAKSKAANTIGQYGN-GFKTS--TMRLGADVI 241
IEDNG GM P + + G++G G+KTS +GA V+
Sbjct: 71 SIEDNGRGM-PTGIHKSGKPTVEVIFTVLHAGGKFGQGGYKTSGGLHGVGASVV 123
>sp|Q6GH51|PARE_STAAR DNA topoisomerase 4 subunit B OS=Staphylococcus aureus (strain
MRSA252) GN=parE PE=3 SV=2
Length = 663
Score = 42.4 bits (98), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 59/114 (51%), Gaps = 11/114 (9%)
Query: 132 GMDHVRVHPKFLHSNATSHKWALGAFAELLDNSLDEVCNGATYSN-IDMLINRKDGSRML 190
G++ VR P ++ +T + E++DNS+DEV NG Y N ID+ IN KDGS +
Sbjct: 17 GLEAVRKRPG-MYIGSTDKRGLHHLVYEIVDNSVDEVLNG--YGNEIDVTIN-KDGS--I 70
Query: 191 LIEDNGGGMNPDKMRHCMSLGYSAKSKAANTIGQYGN-GFKTS--TMRLGADVI 241
IEDNG GM P + + G++G G+KTS +GA V+
Sbjct: 71 SIEDNGRGM-PTGIHKSGKPTVEVIFTVLHAGGKFGQGGYKTSGGLHGVGASVV 123
>sp|P58478|HTPG_RICCN Chaperone protein HtpG OS=Rickettsia conorii (strain ATCC VR-613 /
Malish 7) GN=htpG PE=3 SV=1
Length = 621
Score = 41.2 bits (95), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 46/104 (44%), Gaps = 17/104 (16%)
Query: 175 SNIDMLINRKDGSRMLLIEDNGGGMNPDKMRHCMSLGYSAKSKAAN-------------- 220
SN + + R ++I DNG GMN D + +LG A+S AN
Sbjct: 60 SNFKITVKVDKDHRQIIIRDNGIGMNKDDL--IENLGTIARSGTANFLKSLSGDSKKDNM 117
Query: 221 TIGQYGNGFKTSTMRLGADVIVFSCCCGKDGKSPTRSIGLLSYT 264
IGQ+G GF +S M + V V S G+D S GL YT
Sbjct: 118 LIGQFGVGFYSSFM-VADKVTVTSRKAGEDKVHIWESDGLGEYT 160
>sp|A8F2Y0|HTPG_RICM5 Chaperone protein HtpG OS=Rickettsia massiliae (strain Mtu5)
GN=htpG PE=3 SV=1
Length = 623
Score = 40.0 bits (92), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 54/118 (45%), Gaps = 19/118 (16%)
Query: 161 LDNSLDEVCNGATYSNIDMLINRKDGSRMLLIEDNGGGMNPDKMRHCMSLGYSAKSKAAN 220
L S E+ G + I + +++ +G ++I DNG GMN D + +LG A+S AN
Sbjct: 50 LSQSNSELVAGDSNFKITVKVDKDNGQ--IIIRDNGIGMNKDDL--IENLGTIARSGTAN 105
Query: 221 --------------TIGQYGNGFKTSTMRLGADVIVFSCCCGKDGKSPTRSIGLLSYT 264
IGQ+G GF +S M + V V S G+D S GL YT
Sbjct: 106 FLKSLSGDSKKDNMLIGQFGVGFYSSFM-VADKVTVTSRKAGEDKVHIWESDGLGEYT 162
>sp|A8GTZ5|HTPG_RICRS Chaperone protein HtpG OS=Rickettsia rickettsii (strain Sheila
Smith) GN=htpG PE=3 SV=1
Length = 621
Score = 40.0 bits (92), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 54/118 (45%), Gaps = 19/118 (16%)
Query: 161 LDNSLDEVCNGATYSNIDMLINRKDGSRMLLIEDNGGGMNPDKMRHCMSLGYSAKSKAAN 220
L S E+ G + I + +++ +G ++I DNG GMN D + +LG A+S AN
Sbjct: 48 LSQSNSELVAGDSNFKITVKVDKDNGQ--IIIRDNGIGMNKDDL--IENLGTIARSGTAN 103
Query: 221 --------------TIGQYGNGFKTSTMRLGADVIVFSCCCGKDGKSPTRSIGLLSYT 264
IGQ+G GF +S M + V V S G+D S GL YT
Sbjct: 104 FLKSLSGDSKKDNMLIGQFGVGFYSSFM-VADKVTVTSRKAGEDKVHIWESDGLGEYT 160
>sp|B0BVI6|HTPG_RICRO Chaperone protein HtpG OS=Rickettsia rickettsii (strain Iowa)
GN=htpG PE=3 SV=1
Length = 621
Score = 40.0 bits (92), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 54/118 (45%), Gaps = 19/118 (16%)
Query: 161 LDNSLDEVCNGATYSNIDMLINRKDGSRMLLIEDNGGGMNPDKMRHCMSLGYSAKSKAAN 220
L S E+ G + I + +++ +G ++I DNG GMN D + +LG A+S AN
Sbjct: 48 LSQSNSELVAGDSNFKITVKVDKDNGQ--IIIRDNGIGMNKDDL--IENLGTIARSGTAN 103
Query: 221 --------------TIGQYGNGFKTSTMRLGADVIVFSCCCGKDGKSPTRSIGLLSYT 264
IGQ+G GF +S M + V V S G+D S GL YT
Sbjct: 104 FLKSLSGDSKKDNMLIGQFGVGFYSSFM-VADKVTVTSRKAGEDKVHIWESDGLGEYT 160
>sp|Q9MA55|ACBP4_ARATH Acyl-CoA-binding domain-containing protein 4 OS=Arabidopsis
thaliana GN=ACBP4 PE=1 SV=1
Length = 668
Score = 38.5 bits (88), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 723 LGQLKQENHELKKRLEKKEGELQEERERCRSLE---AQLKVMQQTIEELNKEQESL 775
LG+ + N +L K L+ G+L E+ RC LE A+L+ QT+E L KE E L
Sbjct: 575 LGEAELRNTDLYKELQSVRGQLAAEQSRCFKLEVDVAELRQKLQTLETLQKELELL 630
>sp|Q9P219|DAPLE_HUMAN Protein Daple OS=Homo sapiens GN=CCDC88C PE=1 SV=3
Length = 2028
Score = 33.9 bits (76), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 53/98 (54%), Gaps = 12/98 (12%)
Query: 714 LSDCSL-----GANLGQLKQENHELKKRLEKKEGELQEERERCRSLEAQLKVMQQTIEEL 768
L D SL G G+L++ENH+L K++EK + +L+ E++ + LE + + + E+L
Sbjct: 482 LRDASLVLEESGLKCGELEKENHQLSKKIEKLQTQLEREKQSNQDLETLSEELIREKEQL 541
Query: 769 NKEQESL-------IDIFAEERDRREREEENLRKKIKI 799
+ E+L I +E+D R +LR++ ++
Sbjct: 542 QSDMETLKADKARQIKDLEQEKDHLNRAMWSLRERSQV 579
>sp|Q86VP1|TAXB1_HUMAN Tax1-binding protein 1 OS=Homo sapiens GN=TAX1BP1 PE=1 SV=2
Length = 789
Score = 33.9 bits (76), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 40/71 (56%)
Query: 723 LGQLKQENHELKKRLEKKEGELQEERERCRSLEAQLKVMQQTIEELNKEQESLIDIFAEE 782
+ L++E +L++++ + E EL E+ERC L+A+ K + + + L E E F++
Sbjct: 168 IAVLEKETAQLREQVGRMERELNHEKERCDQLQAEQKGLTEVTQSLKMENEEFKKRFSDA 227
Query: 783 RDRREREEENL 793
+ + EE++
Sbjct: 228 TSKAHQLEEDI 238
>sp|Q5R4U3|TAXB1_PONAB Tax1-binding protein 1 homolog OS=Pongo abelii GN=TAX1BP1 PE=2 SV=2
Length = 813
Score = 33.5 bits (75), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 40/71 (56%)
Query: 723 LGQLKQENHELKKRLEKKEGELQEERERCRSLEAQLKVMQQTIEELNKEQESLIDIFAEE 782
+ L++E +L++++ + E EL E+ERC L+A+ K + + + L E E F++
Sbjct: 168 IAVLEKETAQLREQVGRMERELNHEKERCDQLQAEQKGLTEVTQSLKMENEEFKKRFSDA 227
Query: 783 RDRREREEENL 793
+ + EE++
Sbjct: 228 TSKAHQLEEDI 238
>sp|Q0V9T6|BICR1_XENTR Bicaudal D-related protein 1 OS=Xenopus tropicalis GN=ccdc64 PE=2
SV=1
Length = 599
Score = 33.1 bits (74), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 35/53 (66%), Gaps = 6/53 (11%)
Query: 723 LGQLKQENHELKKRLEKKEGELQEERERCRSLEAQLKVMQQTIEELNKEQESL 775
L L+QE HELK++LE +EGE + R LE+ +K++Q EEL K+Q +L
Sbjct: 105 LEHLEQEKHELKRKLENREGEWE---GRVSELESDVKLLQ---EELEKQQVNL 151
>sp|Q6NRW3|SPC24_XENLA Kinetochore protein Spc24 OS=Xenopus laevis GN=spc24 PE=1 SV=1
Length = 199
Score = 33.1 bits (74), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 29/43 (67%)
Query: 736 RLEKKEGELQEERERCRSLEAQLKVMQQTIEELNKEQESLIDI 778
+L+K + ELQE E+ SLE+ +K +Q+ +EEL +E + D+
Sbjct: 81 KLQKIDRELQERMEKNASLESSIKFLQKDLEELKVMEEEIADM 123
>sp|P97817|CDR2_MOUSE Cerebellar degeneration-related protein 2 OS=Mus musculus GN=Cdr2
PE=1 SV=2
Length = 455
Score = 33.1 bits (74), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 21/148 (14%)
Query: 645 VTARGANGSSQKILAAEKSFGKDGLHRTHPSACL-------------VDSESQQDGASGG 691
VTAR ++QK++A K+ + L T CL + S SQ G
Sbjct: 88 VTARELEETNQKLVAESKASQQKILSLTETIECLQTNIDHLQSQVEELKSSSQGRGRQKA 147
Query: 692 SSVRPFMPSQSKGSEV-NYPEHFLSDCSLGANLGQLK-------QENHELKKRLEKKEGE 743
PS S E+ + +HF+ D + L+ +EN LKK + + +
Sbjct: 148 CDQEKPAPSFSCLKELYDLRQHFVYDHVFAEKITSLQSQQSPDEEENEHLKKAVTMLQAQ 207
Query: 744 LQEERERCRSLEAQLKVMQQTIEELNKE 771
L ER++ S+EA+ KV+ + EL ++
Sbjct: 208 LSLERKKRVSVEAEYKVVLKENSELEQQ 235
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.132 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 316,411,821
Number of Sequences: 539616
Number of extensions: 14558429
Number of successful extensions: 52819
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 273
Number of HSP's successfully gapped in prelim test: 719
Number of HSP's that attempted gapping in prelim test: 47071
Number of HSP's gapped (non-prelim): 5799
length of query: 800
length of database: 191,569,459
effective HSP length: 126
effective length of query: 674
effective length of database: 123,577,843
effective search space: 83291466182
effective search space used: 83291466182
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 65 (29.6 bits)