Your job contains 1 sequence.
>003721
MALDNGIRELTYLSLLSKICSELETHLGFIDKVLAEFISESGRNSETVEIFDDKLKEYGA
DLPNYLVRTLFNVIHTILHPKPKLQSKKKSGRDRKTNYKAEFENDRERSGRYCKSNPPML
KDMPVSRMGGVSGVLASNEYPRYDEEEEEGFASWAEGDEEELEIELSEDQPAFLQGQTRV
SVDLSPVKVFKNPEGSLSRTAALQSALTKERREVREQQLRTMIDSIPKDLNRPWEDPMPE
TGERHLAQELRGVGLSARDMPEWKKNAYGKAFTFGQRSKLSIQEQRRSLPIFKLKNELIQ
AVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCTQPRRVAATSVAKRVAEEFGC
RLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDV
LFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPVDINYSRQEVTDY
LDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPVYSAL
PSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVI
TPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMG
INNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLAS
VDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQPEGDHLTLLAVYEAWKAKN
FSLPWCGENFVNSRSLKKTA
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 003721
(800 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2088847 - symbol:AT3G26560 species:3702 "Arabi... 2883 0. 2
ZFIN|ZDB-GENE-050809-39 - symbol:dhx8 "DEAH (Asp-Glu-Ala-... 2328 8.2e-256 2
UNIPROTKB|E2R9R9 - symbol:DHX8 "Uncharacterized protein" ... 2303 1.8e-255 3
MGI|MGI:1306823 - symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box... 2304 2.2e-253 2
UNIPROTKB|F5H658 - symbol:DHX8 "ATP-dependent RNA helicas... 2304 2.8e-253 2
UNIPROTKB|Q14562 - symbol:DHX8 "ATP-dependent RNA helicas... 2304 2.8e-253 2
UNIPROTKB|D4A805 - symbol:Dhx8 "Protein Dhx8" species:101... 2304 2.8e-253 2
UNIPROTKB|F1MEM4 - symbol:DHX8 "Uncharacterized protein" ... 2303 3.6e-253 2
UNIPROTKB|F1S1H3 - symbol:DHX8 "Uncharacterized protein" ... 2303 3.6e-253 2
RGD|1310723 - symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box pol... 2304 1.8e-251 2
DICTYBASE|DDB_G0291183 - symbol:dhx8 "putative RNA splici... 2338 4.7e-251 2
FB|FBgn0086895 - symbol:pea "peanuts" species:7227 "Droso... 2208 1.3e-244 2
ASPGD|ASPL0000070923 - symbol:AN4721 species:162425 "Emer... 2189 2.0e-239 2
UNIPROTKB|F1P306 - symbol:LOC100858239 "Uncharacterized p... 2091 2.2e-231 2
UNIPROTKB|G4NFJ0 - symbol:MGG_08807 "Pre-mRNA-splicing fa... 2110 3.8e-227 2
WB|WBGene00003393 - symbol:mog-5 species:6239 "Caenorhabd... 2066 5.1e-223 2
UNIPROTKB|Q09530 - symbol:mog-5 "Probable pre-mRNA-splici... 2066 5.1e-223 2
POMBASE|SPAC10F6.02c - symbol:prp22 "ATP-dependent RNA he... 2061 1.3e-222 2
GENEDB_PFALCIPARUM|PF10_0294 - symbol:PF10_0294 "RNA heli... 1976 5.9e-212 3
UNIPROTKB|Q8IJA4 - symbol:PF10_0294 "RNA helicase, putati... 1976 5.9e-212 3
SGD|S000000815 - symbol:PRP22 "DEAH-box RNA-dependent ATP... 1806 3.5e-189 2
CGD|CAL0004768 - symbol:PRP22 species:5476 "Candida albic... 1785 5.2e-184 1
DICTYBASE|DDB_G0285937 - symbol:dhx16 "putative RNA splic... 1674 8.1e-177 3
UNIPROTKB|E1BF68 - symbol:DHX16 "Uncharacterized protein"... 1608 1.3e-170 3
UNIPROTKB|O60231 - symbol:DHX16 "Putative pre-mRNA-splici... 1606 1.3e-170 3
ZFIN|ZDB-GENE-030131-8589 - symbol:dhx16 "DEAH (Asp-Glu-A... 1631 3.0e-170 2
UNIPROTKB|Q767K6 - symbol:DHX16 "Putative pre-mRNA-splici... 1607 5.8e-170 3
UNIPROTKB|F1RU83 - symbol:DHX16 "Putative pre-mRNA-splici... 1607 7.4e-170 3
FB|FBgn0086444 - symbol:l(2)37Cb "lethal (2) 37Cb" specie... 1602 2.5e-169 3
DICTYBASE|DDB_G0285843 - symbol:helD "putative RNA splici... 1624 5.5e-169 2
TAIR|locus:2033723 - symbol:ESP3 "ENHANCED SILENCING PHEN... 1643 5.8e-169 1
ASPGD|ASPL0000014477 - symbol:AN4032 species:162425 "Emer... 1638 2.0e-168 1
UNIPROTKB|F1PGL2 - symbol:DHX16 "Uncharacterized protein"... 1611 3.8e-168 2
RGD|1302963 - symbol:Dhx16 "DEAH (Asp-Glu-Ala-His) box po... 1609 1.3e-167 2
ASPGD|ASPL0000006947 - symbol:AN5827 species:162425 "Emer... 1602 2.7e-167 2
WB|WBGene00003392 - symbol:mog-4 species:6239 "Caenorhabd... 1587 2.2e-165 2
UNIPROTKB|O45244 - symbol:mog-4 "Probable pre-mRNA-splici... 1587 2.2e-165 2
POMBASE|SPBC19C2.01 - symbol:cdc28 "ATP-dependent RNA hel... 1563 3.2e-165 3
TAIR|locus:2062492 - symbol:MEE29 "maternal effect embryo... 1605 6.2e-165 1
UNIPROTKB|G4MTU4 - symbol:MGG_11351 "Pre-mRNA-splicing fa... 1603 1.0e-164 1
POMBASE|SPBC1711.17 - symbol:prp16 "ATP-dependent RNA hel... 1582 4.0e-164 2
UNIPROTKB|E2RC56 - symbol:DHX38 "Uncharacterized protein"... 1570 6.5e-164 2
WB|WBGene00003389 - symbol:mog-1 species:6239 "Caenorhabd... 1572 1.7e-163 2
UNIPROTKB|P34498 - symbol:mog-1 "Probable pre-mRNA-splici... 1572 1.7e-163 2
UNIPROTKB|Q92620 - symbol:DHX38 "Pre-mRNA-splicing factor... 1569 5.8e-163 2
RGD|1310345 - symbol:Dhx38 "DEAH (Asp-Glu-Ala-His) box po... 1563 5.8e-163 2
FB|FBgn0026713 - symbol:l(1)G0007 "lethal (1) G0007" spec... 1558 6.6e-162 2
UNIPROTKB|F1S3A8 - symbol:DHX38 "Uncharacterized protein"... 1568 5.1e-161 1
UNIPROTKB|Q17R09 - symbol:DHX38 "Pre-mRNA-splicing factor... 1567 6.5e-161 1
ZFIN|ZDB-GENE-040426-1144 - symbol:dhx38 "DEAH (Asp-Glu-A... 1549 9.6e-161 2
TAIR|locus:2065210 - symbol:AT2G47250 species:3702 "Arabi... 1549 5.3e-159 1
TAIR|locus:2095989 - symbol:AT3G62310 species:3702 "Arabi... 1548 6.8e-159 1
UNIPROTKB|G4N1N4 - symbol:MGG_07501 "ATP-dependent RNA he... 1526 1.4e-156 1
UNIPROTKB|F1NHI3 - symbol:DHX15 "Uncharacterized protein"... 1470 8.1e-153 2
POMBASE|SPBC16H5.10c - symbol:prp43 "ATP-dependent RNA he... 1485 3.2e-152 1
UNIPROTKB|F1MVJ1 - symbol:DHX38 "Pre-mRNA-splicing factor... 1459 3.5e-152 2
FB|FBgn0033160 - symbol:CG11107 species:7227 "Drosophila ... 1483 5.2e-152 1
ZFIN|ZDB-GENE-030131-650 - symbol:dhx15 "DEAH (Asp-Glu-Al... 1481 8.5e-152 1
UNIPROTKB|A5D7D9 - symbol:DHX15 "Uncharacterized protein"... 1473 6.0e-151 1
UNIPROTKB|E2R2U3 - symbol:DHX15 "Uncharacterized protein"... 1473 6.0e-151 1
UNIPROTKB|O43143 - symbol:DHX15 "Putative pre-mRNA-splici... 1473 6.0e-151 1
UNIPROTKB|F1S5A8 - symbol:DHX15 "Uncharacterized protein"... 1473 6.0e-151 1
MGI|MGI:1099786 - symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) bo... 1473 6.0e-151 1
RGD|1308072 - symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box po... 1473 6.0e-151 1
WB|WBGene00018967 - symbol:F56D2.6 species:6239 "Caenorha... 1444 7.1e-148 1
UNIPROTKB|Q20875 - symbol:F56D2.6 "Putative pre-mRNA-spli... 1444 7.1e-148 1
SGD|S000003088 - symbol:PRP43 "RNA helicase in the DEAH-b... 1437 3.9e-147 1
ASPGD|ASPL0000059403 - symbol:AN0133 species:162425 "Emer... 1426 5.7e-146 1
DICTYBASE|DDB_G0285213 - symbol:dhx15 "putative RNA splic... 1426 5.7e-146 1
CGD|CAL0000153 - symbol:orf19.1687 species:5476 "Candida ... 1423 1.2e-145 1
CGD|CAL0002409 - symbol:orf19.5865 species:5476 "Candida ... 1398 5.3e-143 1
SGD|S000001794 - symbol:PRP16 "DEAH-box RNA helicase invo... 1384 1.6e-141 1
UNIPROTKB|F1SDW0 - symbol:DHX35 "Uncharacterized protein"... 1381 3.4e-141 1
UNIPROTKB|E1BDN4 - symbol:DHX35 "Uncharacterized protein"... 1377 8.9e-141 1
UNIPROTKB|G4NHA6 - symbol:MGG_03893 "Pre-mRNA-splicing fa... 1377 8.9e-141 1
UNIPROTKB|E2RQN1 - symbol:DHX35 "Uncharacterized protein"... 1372 3.0e-140 1
UNIPROTKB|E2RQN7 - symbol:DHX35 "Uncharacterized protein"... 1372 3.0e-140 1
RGD|1311165 - symbol:Dhx35 "DEAH (Asp-Glu-Ala-His) box po... 1370 4.9e-140 1
UNIPROTKB|D3ZZG1 - symbol:Dhx35 "Protein Dhx35" species:1... 1370 4.9e-140 1
UNIPROTKB|E1C4U5 - symbol:DHX35 "Uncharacterized protein"... 1362 3.5e-139 1
UNIPROTKB|Q5THR1 - symbol:DHX35 "Probable ATP-dependent R... 1361 4.4e-139 1
UNIPROTKB|Q9H5Z1 - symbol:DHX35 "Probable ATP-dependent R... 1361 4.4e-139 1
GENEDB_PFALCIPARUM|MAL13P1.322 - symbol:MAL13P1.322 "spli... 684 4.8e-139 3
UNIPROTKB|C0H5K5 - symbol:MAL13P1.322 "Splicing factor, p... 684 4.8e-139 3
ZFIN|ZDB-GENE-070410-11 - symbol:zgc:158828 "zgc:158828" ... 1350 6.5e-138 1
DICTYBASE|DDB_G0270110 - symbol:dhx33 "DEAD/DEAH box heli... 1320 9.8e-135 1
CGD|CAL0005059 - symbol:orf19.2818 species:5476 "Candida ... 1294 5.6e-132 1
SGD|S000005294 - symbol:PRP2 "RNA-dependent ATPase in the... 1288 2.4e-131 1
UNIPROTKB|F1NY80 - symbol:F1NY80 "Uncharacterized protein... 978 1.9e-130 3
POMBASE|SPAC2G11.11c - symbol:prh1 "ATP-dependent RNA hel... 1275 5.7e-130 1
UNIPROTKB|E1C094 - symbol:E1C094 "Uncharacterized protein... 978 1.3e-129 3
UNIPROTKB|F5GXM6 - symbol:DHX35 "Probable ATP-dependent R... 1230 3.0e-129 2
TAIR|locus:2197965 - symbol:AT1G26370 species:3702 "Arabi... 825 3.8e-129 2
ASPGD|ASPL0000052850 - symbol:AN1363 species:162425 "Emer... 1264 8.4e-129 1
TAIR|locus:2010549 - symbol:AT1G27900 species:3702 "Arabi... 1246 6.8e-127 1
WB|WBGene00022056 - symbol:Y67D2.6 species:6239 "Caenorha... 1241 2.3e-126 1
UNIPROTKB|H9KZI9 - symbol:LOC100858239 "Uncharacterized p... 1183 2.4e-123 2
UNIPROTKB|E1BYA5 - symbol:DHX33 "Uncharacterized protein"... 1205 1.5e-122 1
UNIPROTKB|Q9H6R0 - symbol:DHX33 "Putative ATP-dependent R... 1203 2.4e-122 1
MGI|MGI:2445102 - symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) bo... 1201 4.0e-122 1
WARNING: Descriptions of 214 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2088847 [details] [associations]
symbol:AT3G26560 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA;ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005739 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 EMBL:X98130
EMBL:X97970 EMBL:AB028611 IPI:IPI00530246 RefSeq:NP_189288.1
UniGene:At.46918 ProteinModelPortal:Q38953 SMR:Q38953 STRING:Q38953
PaxDb:Q38953 PRIDE:Q38953 EnsemblPlants:AT3G26560.1 GeneID:822264
KEGG:ath:AT3G26560 GeneFarm:1800 TAIR:At3g26560 InParanoid:Q38953
KO:K12818 OMA:NAWCYEN PhylomeDB:Q38953 ProtClustDB:CLSN2684863
Genevestigator:Q38953 GermOnline:AT3G26560 Uniprot:Q38953
Length = 1168
Score = 2883 (1019.9 bits), Expect = 0., Sum P(2) = 0.
Identities = 560/667 (83%), Positives = 610/667 (91%)
Query: 132 SGVLASNEYPRYDXXXXXGFASWAXXXXXXXXXXXXXXQPAFLQGQTRVSVDLSPVKVFK 191
SGVL +E+P YD G +PAFLQGQTR SVD+SPVK+FK
Sbjct: 359 SGVLRVDEFPMYDEDGD-GMLYQEEGAEEELEIEMNEDEPAFLQGQTRYSVDMSPVKIFK 417
Query: 192 NPEGSLSRTAALQSALTKERREVREQQLRTMIDSIPKDLNRPWEDPMPETGERHLAQELR 251
NPEGSLSR AALQSALTKERRE+REQQ RTM+DSIPKDLNRPWEDPMPETGERHLAQELR
Sbjct: 418 NPEGSLSRAAALQSALTKERREMREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELR 477
Query: 252 GVGLSARDMPEWKKNAYGKAFTFGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILI 311
GVGLSA DMPEWKK+A+GK TFGQRSKLSIQEQR SLPI+KLK ELIQAVHDNQVL++I
Sbjct: 478 GVGLSAYDMPEWKKDAFGKTPTFGQRSKLSIQEQRESLPIYKLKKELIQAVHDNQVLVVI 537
Query: 312 GETGSGKTTQLAQYLAEAGYTTKGKIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIR 371
GETGSGKTTQ+ QYLAEAGYTTKGKIGCTQPRRVAA SVAKRVAEEFGCRLGEEVGYAIR
Sbjct: 538 GETGSGKTTQVTQYLAEAGYTTKGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIR 597
Query: 372 FEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKR 431
FEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTI+TDVLFGLLK+L+KR
Sbjct: 598 FEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTIHTDVLFGLLKKLMKR 657
Query: 432 RPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQI 491
R DLRLIVTSATLDAE+FSGYFFNCNIF+IPGRTFPV+I Y++Q TDYLD+ALITVLQI
Sbjct: 658 RLDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQI 717
Query: 492 HVDEPEGDILLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEP 551
H+ EPEGDIL+FLTGQEEID AC+SL E++K LGK+VPEL++LPVYSALPSE+QSRIF+P
Sbjct: 718 HLTEPEGDILVFLTGQEEIDSACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDP 777
Query: 552 APPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQR 611
PPG RKVVVATNIAEASLTIDGI+YV+DPGFAKQNVYNPKQ L+SLVITPISQASA QR
Sbjct: 778 PPPGKRKVVVATNIAEASLTIDGIYYVVDPGFAKQNVYNPKQGLESLVITPISQASAKQR 837
Query: 612 AGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVD 671
AGRAGRTGPGKCYRLYTESAYR+EM PT+IPEIQRINL TTLTMKAMGIN+LLSFDF+D
Sbjct: 838 AGRAGRTGPGKCYRLYTESAYRNEMPPTSIPEIQRINLGMTTLTMKAMGINDLLSFDFMD 897
Query: 672 PPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILT 731
PP PQALISAMEQLYSLGALDEEGLLTKLG+KMAEFPL+PPLSKMLLASVDLGCSDEILT
Sbjct: 898 PPQPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLEPPLSKMLLASVDLGCSDEILT 957
Query: 732 IIAMIQTGHIFTRPRERQAKADEKRARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFV 791
+IAMIQTG+IF RPRE+QA+AD+KRA+FFQPEGDHLTLLAVYEAWKAKNFS PWC ENF+
Sbjct: 958 MIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFI 1017
Query: 792 NSRSLKK 798
SRSL++
Sbjct: 1018 QSRSLRR 1024
Score = 262 (97.3 bits), Expect = 0., Sum P(2) = 0.
Identities = 50/89 (56%), Positives = 67/89 (75%)
Query: 7 IRELTYLSLLSKICSELETHLGFIDKVLAEFISESGRNSETVEIFDDKLKEYGADLPNYL 66
+ +L +LSL+S +C+ELETHLG +KVLAEFI + GR+SETV+ FD LKE GA++P+Y
Sbjct: 6 LNKLNHLSLVSNVCNELETHLGSAEKVLAEFIIDLGRHSETVDEFDKNLKEAGAEMPDYF 65
Query: 67 VRTLFNVIHTILHPKPKLQSKKKSGRDRK 95
VR+L IH I PKPK + KK+ G D+K
Sbjct: 66 VRSLLTTIHGIYPPKPKSEKKKEEGDDQK 94
Score = 40 (19.1 bits), Expect = 4.7e-302, Sum P(2) = 4.7e-302
Identities = 7/24 (29%), Positives = 16/24 (66%)
Query: 85 QSKKKSGRDRKTNYKAEFENDRER 108
+ +++SGRDR + + ++ R+R
Sbjct: 131 RDRRESGRDRDRDRNRDRDDRRDR 154
>ZFIN|ZDB-GENE-050809-39 [details] [associations]
symbol:dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide
8" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0051301 "cell division" evidence=IMP] [GO:0060215
"primitive hemopoiesis" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0070054 "mRNA splicing, via endonucleolytic
cleavage and ligation" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-050809-39 GO:GO:0005524 GO:GO:0005634 GO:GO:0051301
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
GO:GO:0060215 InterPro:IPR013957 Pfam:PF08648 EMBL:AL833789
IPI:IPI00498887 RefSeq:XP_002663993.1 UniGene:Dr.159472
ProteinModelPortal:E7F7E3 Ensembl:ENSDART00000066282 GeneID:606595
KEGG:dre:606595 NextBio:20892459 Bgee:E7F7E3 GO:GO:0070054
Uniprot:E7F7E3
Length = 1210
Score = 2328 (824.6 bits), Expect = 8.2e-256, Sum P(2) = 8.2e-256
Identities = 446/712 (62%), Positives = 562/712 (78%)
Query: 93 DRKTN----YKAEFENDRERSGRYCKSNPPMLKDMPVSRMGGVSGVLASNEYPRYDXXXX 148
DR TN + E E+D R K + P + + +M + VL+ E+P +D
Sbjct: 358 DRPTNLNLGHAPEVEDDTLERKRLTKISDP--EKWEIKQMIAAN-VLSKEEFPDFDEETG 414
Query: 149 XGFASWAXXXXXXXXXXXXXXQPAFLQGQTRVSVDLSPVKVFKNPEGSLSRTAALQSALT 208
+P FL+G T+ S+D+SPVK+ KNP+GSLS+ A +QSAL
Sbjct: 415 I-LPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPVKIVKNPDGSLSQAAMMQSALA 473
Query: 209 KERREVREQQLRTMIDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSARDMPEWKKNAY 268
KERREV++ Q +DSIP LN+ W DP+P+ R +A +RG+G+ D+PEWKK+A+
Sbjct: 474 KERREVKQAQREAEMDSIPMGLNKHWVDPLPDVDGRQIAANMRGIGMMPNDIPEWKKHAF 533
Query: 269 G--KAFTFGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYL 326
G KA ++G++++LSI EQR SLPI+KLK +LIQAVHDNQ+LI+IGETGSGKTTQ+ QYL
Sbjct: 534 GGNKA-SYGKKTQLSILEQRESLPIYKLKEQLIQAVHDNQILIVIGETGSGKTTQITQYL 592
Query: 327 AEAGYTTKGKIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMT 386
AEAGYTT+GKIGCTQPRRVAA SVAKRV+EE+GC LG+EVGY IRFEDCT P+TVIKYMT
Sbjct: 593 AEAGYTTRGKIGCTQPRRVAAMSVAKRVSEEYGCCLGQEVGYTIRFEDCTSPETVIKYMT 652
Query: 387 DGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDA 446
DGMLLRE LID +L QY++IMLDEAHERTI+TDVLFGLLK+ V++R D++LIVTSATLDA
Sbjct: 653 DGMLLRECLIDPDLGQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRTDMKLIVTSATLDA 712
Query: 447 ERFSGYFFNCNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTG 506
+FS YF+ IF+IPGRT+PV++ Y+++ TDYLD++LITV+QIH+ EP GDIL+FLTG
Sbjct: 713 VKFSQYFYEAPIFTIPGRTYPVEVLYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTG 772
Query: 507 QEEIDFACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIA 566
QEEID ACE L E++K+LG DVPEL++LPVYSALPSE+Q+RIF+PAPPG RKVV+ATNIA
Sbjct: 773 QEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIA 832
Query: 567 EASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRL 626
E SLTIDGI+YV+DPGF KQ VYN K +D LV+TPISQA A QRAGRAGRTGPGKCYRL
Sbjct: 833 ETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRL 892
Query: 627 YTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLY 686
YTE AYR EM T +PEIQR NL T L++KAMGIN+LLSFDF+D P + LI+AMEQLY
Sbjct: 893 YTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLY 952
Query: 687 SLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPR 746
+LGALD+EGLLT+LG++MAEFPL+P L KML+ SV LGCS+E+LTI++M+ ++F RP+
Sbjct: 953 TLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPK 1012
Query: 747 ERQAKADEKRARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
++QA AD+K+A+F QPEGDHLTLLAVY +WK FS PWC ENF+ +RSL++
Sbjct: 1013 DKQALADQKKAKFHQPEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRR 1064
Score = 158 (60.7 bits), Expect = 8.2e-256, Sum P(2) = 8.2e-256
Identities = 39/120 (32%), Positives = 63/120 (52%)
Query: 4 DNGIRELTYLSLLSKICSELETHLGFIDKVLAEFISESGRNSETVEIFDDKLKEYGADLP 63
++ +++L YLSL+SK+C+EL+ HLG DK LAEF+ + + F L + GAD
Sbjct: 6 EDELKKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKNTAFDGFKSALVKNGADFT 65
Query: 64 NYLVRTLFNVIHTILHPKPKLQSKKKSGRDRKTNYKAEFENDRERSGRYCKSNPPMLKDM 123
+ L+ L +I T + P K + K S K K E + +E C+ + P ++M
Sbjct: 66 DSLIGNLLRLIQT-MRPPAKASTSKASFPAAKP--KNEKDKLKELFPALCRPDNPTTRNM 122
Score = 47 (21.6 bits), Expect = 4.5e-244, Sum P(2) = 4.5e-244
Identities = 18/71 (25%), Positives = 33/71 (46%)
Query: 44 NSETVEIFDDKLKEYGADLPNYLVRTLFNVIH---TILHPKPKLQSKKKSGRDRKTNYKA 100
+ + V++ D +KE +P+ + H T + K +S+ +S RDR +
Sbjct: 124 DEDDVKVAADAMKELEMFMPSVSGTEPSSSKHRSETSSSSRKKRRSRSRS-RDRDRDRDR 182
Query: 101 EFENDRERSGR 111
+ E DR+R R
Sbjct: 183 DRERDRDRDRR 193
>UNIPROTKB|E2R9R9 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:AAEX03006434 EMBL:AAEX03006433
RefSeq:XP_537627.2 ProteinModelPortal:E2R9R9
Ensembl:ENSCAFT00000023129 GeneID:480507 KEGG:cfa:480507
Uniprot:E2R9R9
Length = 1216
Score = 2303 (815.8 bits), Expect = 1.8e-255, Sum P(3) = 1.8e-255
Identities = 437/700 (62%), Positives = 557/700 (79%)
Query: 101 EFENDRERSGRYCKSNPPMLKDMPVSRMGGVSGVLASNEYPRYDXXXXXGFASWAXXXXX 160
E E+D R + + P + + +M + VL+ E+P +D
Sbjct: 376 EVEDDSLERKRLTRISDP--EKWEIKQMIAAN-VLSKEEFPDFDEETGI-LPKVDDEEDE 431
Query: 161 XXXXXXXXXQPAFLQGQTRVSVDLSPVKVFKNPEGSLSRTAALQSALTKERREVREQQLR 220
+P FL+G T+ S+D+SP+K+ KNP+GSLS+ A +QSAL KERRE+++ Q
Sbjct: 432 DLEIELVEEEPPFLRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQSALAKERRELKQAQRE 491
Query: 221 TMIDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSARDMPEWKKNAYG--KAFTFGQRS 278
+DSIP LN+ W DP+P+ R +A +RG+G+ D+PEWKK+A+G KA ++G+++
Sbjct: 492 AEMDSIPMGLNKHWVDPLPDAEGRQIAANMRGIGMMPNDIPEWKKHAFGGNKA-SYGKKT 550
Query: 279 KLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIG 338
++SI EQR SLPI+KLK +L+QAVHDNQ+LI+IGETGSGKTTQ+ QYLAEAGYT++GKIG
Sbjct: 551 QMSIIEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIG 610
Query: 339 CTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDE 398
CTQPRRVAA SVAKRV+EEFGC LG+EVGY IRFEDCT P+TVIKYMTDGMLLRE LID
Sbjct: 611 CTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDP 670
Query: 399 NLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNI 458
+L+QY++IMLDEAHERTI+TDVLFGLLK+ V++R D++LIVTSATLDA +FS YF+ I
Sbjct: 671 DLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPI 730
Query: 459 FSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLC 518
F+IPGRT+PV+I Y+++ TDYLD++LITV+QIH+ EP GDIL+FLTGQEEID ACE L
Sbjct: 731 FTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILY 790
Query: 519 EKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYV 578
E++K+LG DVPEL++LPVYSALPSE+Q+RIF+PAPPG RKVV+ATNIAE SLTIDGI+YV
Sbjct: 791 ERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYV 850
Query: 579 IDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSP 638
+DPGF KQ VYN K +D LV+TPISQA A QRAGRAGRTGPGKCYRLYTE AYR EM
Sbjct: 851 VDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLT 910
Query: 639 TTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLT 698
T +PEIQR NL T L++KAMGIN+LLSFDF+D P + LI+AMEQLY+LGALD+EGLLT
Sbjct: 911 TNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLT 970
Query: 699 KLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRAR 758
+LG++MAEFPL+P L KML+ SV LGCS+E+LTI++M+ ++F RP+++QA AD+K+A+
Sbjct: 971 RLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAK 1030
Query: 759 FFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
F Q EGDHLTLLAVY +WK FS PWC ENF+ +RSL++
Sbjct: 1031 FHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRR 1070
Score = 151 (58.2 bits), Expect = 1.8e-255, Sum P(3) = 1.8e-255
Identities = 34/93 (36%), Positives = 53/93 (56%)
Query: 7 IRELTYLSLLSKICSELETHLGFIDKVLAEFISESGRNSETVEIFDDKLKEYGADLPNYL 66
+ +L YLSL+SK+C+EL+ HLG DK LAEF+ + T + F L + GA+ + L
Sbjct: 22 LAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKNTTFDTFKASLVKNGAEFTDSL 81
Query: 67 VRTLFNVIHTILHP-KPKLQS----KKKSGRDR 94
+ L +I T+ P KP K K+G+++
Sbjct: 82 ISNLLRLIQTMRPPAKPSTSKDPVVKPKTGKEK 114
Score = 46 (21.3 bits), Expect = 1.8e-255, Sum P(3) = 1.8e-255
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 87 KKKSGRDRKTNYKAEFENDRERSGRY 112
KKK R R + + E + DRE R+
Sbjct: 173 KKKRSRSRDRDRERERDRDREHKRRH 198
Score = 39 (18.8 bits), Expect = 1.0e-254, Sum P(3) = 1.0e-254
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 88 KKSGRDRKTNYKAEFENDRER 108
KK R R + E E DR+R
Sbjct: 172 KKKKRSRSRDRDRERERDRDR 192
>MGI|MGI:1306823 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1306823 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL590994 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR022967 SMART:SM00316 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
OrthoDB:EOG4D26P2 EMBL:BC132445 EMBL:AL591436 IPI:IPI00461304
RefSeq:NP_659080.2 UniGene:Mm.28186 ProteinModelPortal:A2A4P0
SMR:A2A4P0 PaxDb:A2A4P0 PRIDE:A2A4P0 DNASU:217207
Ensembl:ENSMUST00000039152 GeneID:217207 KEGG:mmu:217207
UCSC:uc007lpr.1 InParanoid:A2A4P0 NextBio:375641 Bgee:A2A4P0
Genevestigator:A2A4P0 Uniprot:A2A4P0
Length = 1244
Score = 2304 (816.1 bits), Expect = 2.2e-253, Sum P(2) = 2.2e-253
Identities = 437/700 (62%), Positives = 557/700 (79%)
Query: 101 EFENDRERSGRYCKSNPPMLKDMPVSRMGGVSGVLASNEYPRYDXXXXXGFASWAXXXXX 160
E E+D R + + P + + +M + VL+ E+P +D
Sbjct: 404 EVEDDSLERKRLTRISDP--EKWEIKQMIAAN-VLSKEEFPDFDEETGI-LPKVDDEEDE 459
Query: 161 XXXXXXXXXQPAFLQGQTRVSVDLSPVKVFKNPEGSLSRTAALQSALTKERREVREQQLR 220
+P FL+G T+ S+D+SP+K+ KNP+GSLS+ A +QSAL KERRE+++ Q
Sbjct: 460 DLEIELVEEEPPFLRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQSALAKERRELKQAQRE 519
Query: 221 TMIDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSARDMPEWKKNAYG--KAFTFGQRS 278
+DSIP LN+ W DP+P+ R +A +RG+G+ D+PEWKK+A+G KA ++G+++
Sbjct: 520 AEMDSIPMGLNKHWVDPLPDAEGRQIAANMRGIGMMPNDIPEWKKHAFGGNKA-SYGKKT 578
Query: 279 KLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIG 338
++SI EQR SLPI+KLK +L+QAVHDNQ+LI+IGETGSGKTTQ+ QYLAEAGYT++GKIG
Sbjct: 579 QMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIG 638
Query: 339 CTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDE 398
CTQPRRVAA SVAKRV+EEFGC LG+EVGY IRFEDCT P+TVIKYMTDGMLLRE LID
Sbjct: 639 CTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDP 698
Query: 399 NLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNI 458
+L+QY++IMLDEAHERTI+TDVLFGLLK+ V++R D++LIVTSATLDA +FS YF+ I
Sbjct: 699 DLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPI 758
Query: 459 FSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLC 518
F+IPGRT+PV+I Y+++ TDYLD++LITV+QIH+ EP GDIL+FLTGQEEID ACE L
Sbjct: 759 FTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILY 818
Query: 519 EKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYV 578
E++K+LG DVPEL++LPVYSALPSE+Q+RIF+PAPPG RKVV+ATNIAE SLTIDGI+YV
Sbjct: 819 ERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYV 878
Query: 579 IDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSP 638
+DPGF KQ VYN K +D LV+TPISQA A QRAGRAGRTGPGKCYRLYTE AYR EM
Sbjct: 879 VDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLT 938
Query: 639 TTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLT 698
T +PEIQR NL T L++KAMGIN+LLSFDF+D P + LI+AMEQLY+LGALD+EGLLT
Sbjct: 939 TNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLT 998
Query: 699 KLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRAR 758
+LG++MAEFPL+P L KML+ SV LGCS+E+LTI++M+ ++F RP+++QA AD+K+A+
Sbjct: 999 RLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAK 1058
Query: 759 FFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
F Q EGDHLTLLAVY +WK FS PWC ENF+ +RSL++
Sbjct: 1059 FHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRR 1098
Score = 159 (61.0 bits), Expect = 2.2e-253, Sum P(2) = 2.2e-253
Identities = 39/117 (33%), Positives = 60/117 (51%)
Query: 7 IRELTYLSLLSKICSELETHLGFIDKVLAEFISESGRNSETVEIFDDKLKEYGADLPNYL 66
+ +L YLSL+SK+C+EL+ HLG DK LAEF+ + T + F L + GA+ + L
Sbjct: 22 LAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKNTTFDTFKASLVKNGAEFTDSL 81
Query: 67 VRTLFNVIHTILHPKPKLQSKKKSGRDRKTNYKAEFENDRERSGRYCKSNPPMLKDM 123
+ L +I T+ P +K + +D K E E RE C+ + P + M
Sbjct: 82 ISNLLRLIQTMRPP-----AKPSTSKDPVVKPKTEKEKLRELFPVLCQPDNPSARTM 133
Score = 38 (18.4 bits), Expect = 1.4e-240, Sum P(2) = 1.4e-240
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 87 KKKSGRDRKTNYKAEFENDRER 108
KKK R R + + + DR+R
Sbjct: 173 KKKRSRSRDRDRDRDRDRDRDR 194
>UNIPROTKB|F5H658 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
HGNC:HGNC:2749 EMBL:AC068675 EMBL:AC087650 IPI:IPI01010550
ProteinModelPortal:F5H658 SMR:F5H658 Ensembl:ENST00000540306
UCSC:uc010wig.2 ArrayExpress:F5H658 Bgee:F5H658 Uniprot:F5H658
Length = 1181
Score = 2304 (816.1 bits), Expect = 2.8e-253, Sum P(2) = 2.8e-253
Identities = 437/700 (62%), Positives = 557/700 (79%)
Query: 101 EFENDRERSGRYCKSNPPMLKDMPVSRMGGVSGVLASNEYPRYDXXXXXGFASWAXXXXX 160
E E+D R + + P + + +M + VL+ E+P +D
Sbjct: 380 EVEDDSLERKRLTRISDP--EKWEIKQMIAAN-VLSKEEFPDFDEETGI-LPKVDDEEDE 435
Query: 161 XXXXXXXXXQPAFLQGQTRVSVDLSPVKVFKNPEGSLSRTAALQSALTKERREVREQQLR 220
+P FL+G T+ S+D+SP+K+ KNP+GSLS+ A +QSAL KERRE+++ Q
Sbjct: 436 DLEIELVEEEPPFLRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQSALAKERRELKQAQRE 495
Query: 221 TMIDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSARDMPEWKKNAYG--KAFTFGQRS 278
+DSIP LN+ W DP+P+ R +A +RG+G+ D+PEWKK+A+G KA ++G+++
Sbjct: 496 AEMDSIPMGLNKHWVDPLPDAEGRQIAANMRGIGMMPNDIPEWKKHAFGGNKA-SYGKKT 554
Query: 279 KLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIG 338
++SI EQR SLPI+KLK +L+QAVHDNQ+LI+IGETGSGKTTQ+ QYLAEAGYT++GKIG
Sbjct: 555 QMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIG 614
Query: 339 CTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDE 398
CTQPRRVAA SVAKRV+EEFGC LG+EVGY IRFEDCT P+TVIKYMTDGMLLRE LID
Sbjct: 615 CTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDP 674
Query: 399 NLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNI 458
+L+QY++IMLDEAHERTI+TDVLFGLLK+ V++R D++LIVTSATLDA +FS YF+ I
Sbjct: 675 DLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPI 734
Query: 459 FSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLC 518
F+IPGRT+PV+I Y+++ TDYLD++LITV+QIH+ EP GDIL+FLTGQEEID ACE L
Sbjct: 735 FTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILY 794
Query: 519 EKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYV 578
E++K+LG DVPEL++LPVYSALPSE+Q+RIF+PAPPG RKVV+ATNIAE SLTIDGI+YV
Sbjct: 795 ERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYV 854
Query: 579 IDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSP 638
+DPGF KQ VYN K +D LV+TPISQA A QRAGRAGRTGPGKCYRLYTE AYR EM
Sbjct: 855 VDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLT 914
Query: 639 TTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLT 698
T +PEIQR NL T L++KAMGIN+LLSFDF+D P + LI+AMEQLY+LGALD+EGLLT
Sbjct: 915 TNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLT 974
Query: 699 KLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRAR 758
+LG++MAEFPL+P L KML+ SV LGCS+E+LTI++M+ ++F RP+++QA AD+K+A+
Sbjct: 975 RLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAK 1034
Query: 759 FFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
F Q EGDHLTLLAVY +WK FS PWC ENF+ +RSL++
Sbjct: 1035 FHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRR 1074
Score = 158 (60.7 bits), Expect = 2.8e-253, Sum P(2) = 2.8e-253
Identities = 38/117 (32%), Positives = 61/117 (52%)
Query: 7 IRELTYLSLLSKICSELETHLGFIDKVLAEFISESGRNSETVEIFDDKLKEYGADLPNYL 66
+ +L YLSL+SK+C+EL+ HLG DK LAEF+ + T + F L + GA+ + L
Sbjct: 22 LAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKNTTFDTFKASLVKNGAEFTDSL 81
Query: 67 VRTLFNVIHTILHPKPKLQSKKKSGRDRKTNYKAEFENDRERSGRYCKSNPPMLKDM 123
+ L +I T+ P +K + +D K E E +E C+ + P ++ M
Sbjct: 82 ISNLLRLIQTMRPP-----AKPSTSKDPVVKPKTEKEKLKELFPVLCQPDNPSVRTM 133
Score = 39 (18.8 bits), Expect = 1.1e-240, Sum P(2) = 1.1e-240
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 87 KKKSGRDRKTNYKAEFENDRERS 109
KKK R R N + + DRER+
Sbjct: 173 KKKRSRSRDRN--RDRDRDRERN 193
>UNIPROTKB|Q14562 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0005681 "spliceosomal complex" evidence=TAS]
[GO:0008380 "RNA splicing" evidence=TAS] [GO:0006396 "RNA
processing" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 EMBL:D50487 GO:GO:0005524 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 KO:K12818 OMA:NAWCYEN IPI:IPI00031508 PIR:A56236
RefSeq:NP_004932.1 UniGene:Hs.463105 PDB:2EQS PDB:3I4U PDBsum:2EQS
PDBsum:3I4U ProteinModelPortal:Q14562 SMR:Q14562 IntAct:Q14562
STRING:Q14562 PhosphoSite:Q14562 DMDM:3023637 PaxDb:Q14562
PeptideAtlas:Q14562 PRIDE:Q14562 Ensembl:ENST00000262415
GeneID:1659 KEGG:hsa:1659 UCSC:uc002idu.1 CTD:1659
GeneCards:GC17P041572 HGNC:HGNC:2749 HPA:HPA049285 MIM:600396
neXtProt:NX_Q14562 PharmGKB:PA27231 InParanoid:Q14562
OrthoDB:EOG4D26P2 PhylomeDB:Q14562 EvolutionaryTrace:Q14562
GenomeRNAi:1659 NextBio:6828 ArrayExpress:Q14562 Bgee:Q14562
CleanEx:HS_DHX8 Genevestigator:Q14562 GermOnline:ENSG00000067596
Uniprot:Q14562
Length = 1220
Score = 2304 (816.1 bits), Expect = 2.8e-253, Sum P(2) = 2.8e-253
Identities = 437/700 (62%), Positives = 557/700 (79%)
Query: 101 EFENDRERSGRYCKSNPPMLKDMPVSRMGGVSGVLASNEYPRYDXXXXXGFASWAXXXXX 160
E E+D R + + P + + +M + VL+ E+P +D
Sbjct: 380 EVEDDSLERKRLTRISDP--EKWEIKQMIAAN-VLSKEEFPDFDEETGI-LPKVDDEEDE 435
Query: 161 XXXXXXXXXQPAFLQGQTRVSVDLSPVKVFKNPEGSLSRTAALQSALTKERREVREQQLR 220
+P FL+G T+ S+D+SP+K+ KNP+GSLS+ A +QSAL KERRE+++ Q
Sbjct: 436 DLEIELVEEEPPFLRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQSALAKERRELKQAQRE 495
Query: 221 TMIDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSARDMPEWKKNAYG--KAFTFGQRS 278
+DSIP LN+ W DP+P+ R +A +RG+G+ D+PEWKK+A+G KA ++G+++
Sbjct: 496 AEMDSIPMGLNKHWVDPLPDAEGRQIAANMRGIGMMPNDIPEWKKHAFGGNKA-SYGKKT 554
Query: 279 KLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIG 338
++SI EQR SLPI+KLK +L+QAVHDNQ+LI+IGETGSGKTTQ+ QYLAEAGYT++GKIG
Sbjct: 555 QMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIG 614
Query: 339 CTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDE 398
CTQPRRVAA SVAKRV+EEFGC LG+EVGY IRFEDCT P+TVIKYMTDGMLLRE LID
Sbjct: 615 CTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDP 674
Query: 399 NLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNI 458
+L+QY++IMLDEAHERTI+TDVLFGLLK+ V++R D++LIVTSATLDA +FS YF+ I
Sbjct: 675 DLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPI 734
Query: 459 FSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLC 518
F+IPGRT+PV+I Y+++ TDYLD++LITV+QIH+ EP GDIL+FLTGQEEID ACE L
Sbjct: 735 FTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILY 794
Query: 519 EKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYV 578
E++K+LG DVPEL++LPVYSALPSE+Q+RIF+PAPPG RKVV+ATNIAE SLTIDGI+YV
Sbjct: 795 ERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYV 854
Query: 579 IDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSP 638
+DPGF KQ VYN K +D LV+TPISQA A QRAGRAGRTGPGKCYRLYTE AYR EM
Sbjct: 855 VDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLT 914
Query: 639 TTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLT 698
T +PEIQR NL T L++KAMGIN+LLSFDF+D P + LI+AMEQLY+LGALD+EGLLT
Sbjct: 915 TNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLT 974
Query: 699 KLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRAR 758
+LG++MAEFPL+P L KML+ SV LGCS+E+LTI++M+ ++F RP+++QA AD+K+A+
Sbjct: 975 RLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAK 1034
Query: 759 FFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
F Q EGDHLTLLAVY +WK FS PWC ENF+ +RSL++
Sbjct: 1035 FHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRR 1074
Score = 158 (60.7 bits), Expect = 2.8e-253, Sum P(2) = 2.8e-253
Identities = 38/117 (32%), Positives = 61/117 (52%)
Query: 7 IRELTYLSLLSKICSELETHLGFIDKVLAEFISESGRNSETVEIFDDKLKEYGADLPNYL 66
+ +L YLSL+SK+C+EL+ HLG DK LAEF+ + T + F L + GA+ + L
Sbjct: 22 LAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKNTTFDTFKASLVKNGAEFTDSL 81
Query: 67 VRTLFNVIHTILHPKPKLQSKKKSGRDRKTNYKAEFENDRERSGRYCKSNPPMLKDM 123
+ L +I T+ P +K + +D K E E +E C+ + P ++ M
Sbjct: 82 ISNLLRLIQTMRPP-----AKPSTSKDPVVKPKTEKEKLKELFPVLCQPDNPSVRTM 133
Score = 39 (18.8 bits), Expect = 1.1e-240, Sum P(2) = 1.1e-240
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 87 KKKSGRDRKTNYKAEFENDRERS 109
KKK R R N + + DRER+
Sbjct: 173 KKKRSRSRDRN--RDRDRDRERN 193
>UNIPROTKB|D4A805 [details] [associations]
symbol:Dhx8 "Protein Dhx8" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1310723 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 EMBL:CH473948 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
OMA:NAWCYEN IPI:IPI00567810 UniGene:Rn.108087
Ensembl:ENSRNOT00000028198 Uniprot:D4A805
Length = 1242
Score = 2304 (816.1 bits), Expect = 2.8e-253, Sum P(2) = 2.8e-253
Identities = 437/700 (62%), Positives = 557/700 (79%)
Query: 101 EFENDRERSGRYCKSNPPMLKDMPVSRMGGVSGVLASNEYPRYDXXXXXGFASWAXXXXX 160
E E+D R + + P + + +M + VL+ E+P +D
Sbjct: 402 EVEDDSLERKRLTRISDP--EKWEIKQMIAAN-VLSKEEFPDFDEETGI-LPKVDDEEDE 457
Query: 161 XXXXXXXXXQPAFLQGQTRVSVDLSPVKVFKNPEGSLSRTAALQSALTKERREVREQQLR 220
+P FL+G T+ S+D+SP+K+ KNP+GSLS+ A +QSAL KERRE+++ Q
Sbjct: 458 DLEIELVEEEPPFLRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQSALAKERRELKQAQRE 517
Query: 221 TMIDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSARDMPEWKKNAYG--KAFTFGQRS 278
+DSIP LN+ W DP+P+ R +A +RG+G+ D+PEWKK+A+G KA ++G+++
Sbjct: 518 AEMDSIPMGLNKHWVDPLPDAEGRQIAANMRGIGMMPNDIPEWKKHAFGGNKA-SYGKKT 576
Query: 279 KLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIG 338
++SI EQR SLPI+KLK +L+QAVHDNQ+LI+IGETGSGKTTQ+ QYLAEAGYT++GKIG
Sbjct: 577 QMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIG 636
Query: 339 CTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDE 398
CTQPRRVAA SVAKRV+EEFGC LG+EVGY IRFEDCT P+TVIKYMTDGMLLRE LID
Sbjct: 637 CTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDP 696
Query: 399 NLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNI 458
+L+QY++IMLDEAHERTI+TDVLFGLLK+ V++R D++LIVTSATLDA +FS YF+ I
Sbjct: 697 DLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPI 756
Query: 459 FSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLC 518
F+IPGRT+PV+I Y+++ TDYLD++LITV+QIH+ EP GDIL+FLTGQEEID ACE L
Sbjct: 757 FTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILY 816
Query: 519 EKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYV 578
E++K+LG DVPEL++LPVYSALPSE+Q+RIF+PAPPG RKVV+ATNIAE SLTIDGI+YV
Sbjct: 817 ERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYV 876
Query: 579 IDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSP 638
+DPGF KQ VYN K +D LV+TPISQA A QRAGRAGRTGPGKCYRLYTE AYR EM
Sbjct: 877 VDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLT 936
Query: 639 TTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLT 698
T +PEIQR NL T L++KAMGIN+LLSFDF+D P + LI+AMEQLY+LGALD+EGLLT
Sbjct: 937 TNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLT 996
Query: 699 KLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRAR 758
+LG++MAEFPL+P L KML+ SV LGCS+E+LTI++M+ ++F RP+++QA AD+K+A+
Sbjct: 997 RLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAK 1056
Query: 759 FFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
F Q EGDHLTLLAVY +WK FS PWC ENF+ +RSL++
Sbjct: 1057 FHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRR 1096
Score = 158 (60.7 bits), Expect = 2.8e-253, Sum P(2) = 2.8e-253
Identities = 38/117 (32%), Positives = 61/117 (52%)
Query: 7 IRELTYLSLLSKICSELETHLGFIDKVLAEFISESGRNSETVEIFDDKLKEYGADLPNYL 66
+ +L YLSL+SK+C+EL+ HLG DK LAEF+ + T + F L + GA+ + L
Sbjct: 22 LAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKNTTFDTFKASLVKNGAEFTDSL 81
Query: 67 VRTLFNVIHTILHPKPKLQSKKKSGRDRKTNYKAEFENDRERSGRYCKSNPPMLKDM 123
+ L +I T+ P +K + +D K E E +E C+ + P ++ M
Sbjct: 82 ISNLLRLIQTMRPP-----AKPSTSKDPVVKPKTEKEKLKELFPVLCQPDNPSVRTM 133
Score = 39 (18.8 bits), Expect = 1.1e-240, Sum P(2) = 1.1e-240
Identities = 18/65 (27%), Positives = 29/65 (44%)
Query: 44 NSETVEIFDDKLKEYGADLPNYLVRTLFNVIHTILHPKPKLQSKKKSGRDRKTNYKAEFE 103
+ E V++ D LKE A +P+ + T + K KKK R R + + +
Sbjct: 135 DEEDVKVAVDVLKELEALMPSAAGQEKQR--DTEHRDRTK---KKKRSRSRDRDRDRDRD 189
Query: 104 NDRER 108
DR+R
Sbjct: 190 RDRDR 194
>UNIPROTKB|F1MEM4 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
OMA:NAWCYEN EMBL:DAAA02049231 EMBL:DAAA02049230 IPI:IPI00695401
Ensembl:ENSBTAT00000010976 Uniprot:F1MEM4
Length = 1230
Score = 2303 (815.8 bits), Expect = 3.6e-253, Sum P(2) = 3.6e-253
Identities = 437/700 (62%), Positives = 557/700 (79%)
Query: 101 EFENDRERSGRYCKSNPPMLKDMPVSRMGGVSGVLASNEYPRYDXXXXXGFASWAXXXXX 160
E E+D R + + P + + +M + VL+ E+P +D
Sbjct: 390 EVEDDSLERKRLTRISDP--EKWEIKQMIAAN-VLSKEEFPDFDEETGI-LPKVDDEEDE 445
Query: 161 XXXXXXXXXQPAFLQGQTRVSVDLSPVKVFKNPEGSLSRTAALQSALTKERREVREQQLR 220
+P FL+G T+ S+D+SP+K+ KNP+GSLS+ A +QSAL KERRE+++ Q
Sbjct: 446 DLEIELVEEEPPFLRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQSALAKERRELKQAQRE 505
Query: 221 TMIDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSARDMPEWKKNAYG--KAFTFGQRS 278
+DSIP LN+ W DP+P+ R +A +RG+G+ D+PEWKK+A+G KA ++G+++
Sbjct: 506 AEMDSIPMGLNKHWVDPLPDAEGRQIAANMRGIGMMPNDIPEWKKHAFGGNKA-SYGKKT 564
Query: 279 KLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIG 338
++SI EQR SLPI+KLK +L+QAVHDNQ+LI+IGETGSGKTTQ+ QYLAEAGYT++GKIG
Sbjct: 565 QMSIIEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIG 624
Query: 339 CTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDE 398
CTQPRRVAA SVAKRV+EEFGC LG+EVGY IRFEDCT P+TVIKYMTDGMLLRE LID
Sbjct: 625 CTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDP 684
Query: 399 NLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNI 458
+L+QY++IMLDEAHERTI+TDVLFGLLK+ V++R D++LIVTSATLDA +FS YF+ I
Sbjct: 685 DLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPI 744
Query: 459 FSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLC 518
F+IPGRT+PV+I Y+++ TDYLD++LITV+QIH+ EP GDIL+FLTGQEEID ACE L
Sbjct: 745 FTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILY 804
Query: 519 EKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYV 578
E++K+LG DVPEL++LPVYSALPSE+Q+RIF+PAPPG RKVV+ATNIAE SLTIDGI+YV
Sbjct: 805 ERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYV 864
Query: 579 IDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSP 638
+DPGF KQ VYN K +D LV+TPISQA A QRAGRAGRTGPGKCYRLYTE AYR EM
Sbjct: 865 VDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLT 924
Query: 639 TTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLT 698
T +PEIQR NL T L++KAMGIN+LLSFDF+D P + LI+AMEQLY+LGALD+EGLLT
Sbjct: 925 TNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLT 984
Query: 699 KLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRAR 758
+LG++MAEFPL+P L KML+ SV LGCS+E+LTI++M+ ++F RP+++QA AD+K+A+
Sbjct: 985 RLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAK 1044
Query: 759 FFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
F Q EGDHLTLLAVY +WK FS PWC ENF+ +RSL++
Sbjct: 1045 FHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRR 1084
Score = 158 (60.7 bits), Expect = 3.6e-253, Sum P(2) = 3.6e-253
Identities = 38/117 (32%), Positives = 61/117 (52%)
Query: 7 IRELTYLSLLSKICSELETHLGFIDKVLAEFISESGRNSETVEIFDDKLKEYGADLPNYL 66
+ +L YLSL+SK+C+EL+ HLG DK LAEF+ + T + F L + GA+ + L
Sbjct: 34 LAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKNTTFDTFKASLVKNGAEFTDSL 93
Query: 67 VRTLFNVIHTILHPKPKLQSKKKSGRDRKTNYKAEFENDRERSGRYCKSNPPMLKDM 123
+ L +I T+ P +K + +D K E E +E C+ + P ++ M
Sbjct: 94 ISNLLRLIQTMRPP-----AKPSTSKDPVVKPKTEKEKLKELFPVLCQPDNPSVRTM 145
Score = 49 (22.3 bits), Expect = 1.2e-241, Sum P(2) = 1.2e-241
Identities = 18/65 (27%), Positives = 32/65 (49%)
Query: 44 NSETVEIFDDKLKEYGADLPNYLVRTLFNVIHTILHPKPKLQSKKKSGRDRKTNYKAEFE 103
+ + V++ D LKE A +P+ + H + K + KK+S R R+ + E E
Sbjct: 147 DEDDVKVAVDVLKELEALMPSAAGQEK----HRDTEHRDKAKKKKRS-RSRERDRDRERE 201
Query: 104 NDRER 108
+R+R
Sbjct: 202 RERDR 206
>UNIPROTKB|F1S1H3 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:FP102477 RefSeq:XP_003131427.2
Ensembl:ENSSSCT00000018917 GeneID:100517118 KEGG:ssc:100517118
Uniprot:F1S1H3
Length = 1212
Score = 2303 (815.8 bits), Expect = 3.6e-253, Sum P(2) = 3.6e-253
Identities = 437/700 (62%), Positives = 557/700 (79%)
Query: 101 EFENDRERSGRYCKSNPPMLKDMPVSRMGGVSGVLASNEYPRYDXXXXXGFASWAXXXXX 160
E E+D R + + P + + +M + VL+ E+P +D
Sbjct: 372 EVEDDSLERKRLTRISDP--EKWEIKQMIAAN-VLSKEEFPDFDEETGI-LPKVDDEEDE 427
Query: 161 XXXXXXXXXQPAFLQGQTRVSVDLSPVKVFKNPEGSLSRTAALQSALTKERREVREQQLR 220
+P FL+G T+ S+D+SP+K+ KNP+GSLS+ A +QSAL KERRE+++ Q
Sbjct: 428 DLEIELVEEEPPFLRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQSALAKERRELKQAQRE 487
Query: 221 TMIDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSARDMPEWKKNAYG--KAFTFGQRS 278
+DSIP LN+ W DP+P+ R +A +RG+G+ D+PEWKK+A+G KA ++G+++
Sbjct: 488 AEMDSIPMGLNKHWVDPLPDAEGRQIAANMRGIGMMPNDIPEWKKHAFGGNKA-SYGKKT 546
Query: 279 KLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIG 338
++SI EQR SLPI+KLK +L+QAVHDNQ+LI+IGETGSGKTTQ+ QYLAEAGYT++GKIG
Sbjct: 547 QMSIIEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIG 606
Query: 339 CTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDE 398
CTQPRRVAA SVAKRV+EEFGC LG+EVGY IRFEDCT P+TVIKYMTDGMLLRE LID
Sbjct: 607 CTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDP 666
Query: 399 NLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNI 458
+L+QY++IMLDEAHERTI+TDVLFGLLK+ V++R D++LIVTSATLDA +FS YF+ I
Sbjct: 667 DLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPI 726
Query: 459 FSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLC 518
F+IPGRT+PV+I Y+++ TDYLD++LITV+QIH+ EP GDIL+FLTGQEEID ACE L
Sbjct: 727 FTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILY 786
Query: 519 EKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYV 578
E++K+LG DVPEL++LPVYSALPSE+Q+RIF+PAPPG RKVV+ATNIAE SLTIDGI+YV
Sbjct: 787 ERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYV 846
Query: 579 IDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSP 638
+DPGF KQ VYN K +D LV+TPISQA A QRAGRAGRTGPGKCYRLYTE AYR EM
Sbjct: 847 VDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLT 906
Query: 639 TTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLT 698
T +PEIQR NL T L++KAMGIN+LLSFDF+D P + LI+AMEQLY+LGALD+EGLLT
Sbjct: 907 TNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLT 966
Query: 699 KLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRAR 758
+LG++MAEFPL+P L KML+ SV LGCS+E+LTI++M+ ++F RP+++QA AD+K+A+
Sbjct: 967 RLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAK 1026
Query: 759 FFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
F Q EGDHLTLLAVY +WK FS PWC ENF+ +RSL++
Sbjct: 1027 FHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRR 1066
Score = 158 (60.7 bits), Expect = 3.6e-253, Sum P(2) = 3.6e-253
Identities = 38/117 (32%), Positives = 61/117 (52%)
Query: 7 IRELTYLSLLSKICSELETHLGFIDKVLAEFISESGRNSETVEIFDDKLKEYGADLPNYL 66
+ +L YLSL+SK+C+EL+ HLG DK LAEF+ + T + F L + GA+ + L
Sbjct: 22 LAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKNTTFDTFKASLVKNGAEFTDSL 81
Query: 67 VRTLFNVIHTILHPKPKLQSKKKSGRDRKTNYKAEFENDRERSGRYCKSNPPMLKDM 123
+ L +I T+ P +K + +D K E E +E C+ + P ++ M
Sbjct: 82 ISNLLRLIQTMRPP-----AKPSTSKDPVVKPKTEKEKLKELFPVLCQPDNPSVRTM 133
Score = 46 (21.3 bits), Expect = 2.6e-241, Sum P(2) = 2.6e-241
Identities = 18/68 (26%), Positives = 32/68 (47%)
Query: 44 NSETVEIFDDKLKEYGADLPNYLVRTLFNVIHTILHPKPKLQSKKKSGRDRKTNYKAEFE 103
+ + V++ D LKE A +P+ + H + K + KK+S R+R + E +
Sbjct: 135 DEDDVKVAVDVLKELEALMPSAAGQER----HRDTEHRDKTKKKKRS-RERDRDRDRERD 189
Query: 104 NDRERSGR 111
D +R R
Sbjct: 190 RDHKRRHR 197
>RGD|1310723 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310723
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241 KO:K12818 CTD:1659
OrthoDB:EOG4D26P2 UniGene:Rn.108087 EMBL:AY383690 IPI:IPI00370026
RefSeq:NP_001041309.1 SMR:Q6TXG4 Ensembl:ENSRNOT00000048140
GeneID:287727 KEGG:rno:287727 UCSC:RGD:1310723 NextBio:626887
Genevestigator:Q6TXG4 Uniprot:Q6TXG4
Length = 1210
Score = 2304 (816.1 bits), Expect = 1.8e-251, Sum P(2) = 1.8e-251
Identities = 437/700 (62%), Positives = 557/700 (79%)
Query: 101 EFENDRERSGRYCKSNPPMLKDMPVSRMGGVSGVLASNEYPRYDXXXXXGFASWAXXXXX 160
E E+D R + + P + + +M + VL+ E+P +D
Sbjct: 349 EVEDDSLERKRLTRISDP--EKWEIKQMIAAN-VLSKEEFPDFDEETGI-LPKVDDEEDE 404
Query: 161 XXXXXXXXXQPAFLQGQTRVSVDLSPVKVFKNPEGSLSRTAALQSALTKERREVREQQLR 220
+P FL+G T+ S+D+SP+K+ KNP+GSLS+ A +QSAL KERRE+++ Q
Sbjct: 405 DLEIELVEEEPPFLRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQSALAKERRELKQAQRE 464
Query: 221 TMIDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSARDMPEWKKNAYG--KAFTFGQRS 278
+DSIP LN+ W DP+P+ R +A +RG+G+ D+PEWKK+A+G KA ++G+++
Sbjct: 465 AEMDSIPMGLNKHWVDPLPDAEGRQIAANMRGIGMMPNDIPEWKKHAFGGNKA-SYGKKT 523
Query: 279 KLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIG 338
++SI EQR SLPI+KLK +L+QAVHDNQ+LI+IGETGSGKTTQ+ QYLAEAGYT++GKIG
Sbjct: 524 QMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIG 583
Query: 339 CTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDE 398
CTQPRRVAA SVAKRV+EEFGC LG+EVGY IRFEDCT P+TVIKYMTDGMLLRE LID
Sbjct: 584 CTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDP 643
Query: 399 NLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNI 458
+L+QY++IMLDEAHERTI+TDVLFGLLK+ V++R D++LIVTSATLDA +FS YF+ I
Sbjct: 644 DLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPI 703
Query: 459 FSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLC 518
F+IPGRT+PV+I Y+++ TDYLD++LITV+QIH+ EP GDIL+FLTGQEEID ACE L
Sbjct: 704 FTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILY 763
Query: 519 EKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYV 578
E++K+LG DVPEL++LPVYSALPSE+Q+RIF+PAPPG RKVV+ATNIAE SLTIDGI+YV
Sbjct: 764 ERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYV 823
Query: 579 IDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSP 638
+DPGF KQ VYN K +D LV+TPISQA A QRAGRAGRTGPGKCYRLYTE AYR EM
Sbjct: 824 VDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLT 883
Query: 639 TTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLT 698
T +PEIQR NL T L++KAMGIN+LLSFDF+D P + LI+AMEQLY+LGALD+EGLLT
Sbjct: 884 TNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLT 943
Query: 699 KLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRAR 758
+LG++MAEFPL+P L KML+ SV LGCS+E+LTI++M+ ++F RP+++QA AD+K+A+
Sbjct: 944 RLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAK 1003
Query: 759 FFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
F Q EGDHLTLLAVY +WK FS PWC ENF+ +RSL++
Sbjct: 1004 FHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRR 1043
Score = 141 (54.7 bits), Expect = 1.8e-251, Sum P(2) = 1.8e-251
Identities = 38/110 (34%), Positives = 56/110 (50%)
Query: 7 IRELTYLSLLSKICSELETHLGFIDKVLAEFISESGRNSETVEIFDDKLKEYGADLPNYL 66
+ +L YLSL+SK+C+EL+ HLG DK LAEF+ + T + F L + GA+ L
Sbjct: 22 LAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKNTTFDTFKASLVKNGAEFTTML 81
Query: 67 ----VRTLFNVIHTI--LHPKPKLQSKKKSG--RDRKTNYKAEFENDRER 108
V+ +V+ + L P Q K++ RDR K DR+R
Sbjct: 82 DEEDVKVAVDVLKELEALMPSAAGQEKQRDTEHRDRTKKKKRSRSRDRDR 131
Score = 42 (19.8 bits), Expect = 5.3e-241, Sum P(2) = 5.3e-241
Identities = 28/105 (26%), Positives = 45/105 (42%)
Query: 4 DNGIRELTYLSLLSKICSELETHLGFIDKVLAEFISESGRNSETVEIFDDKLKEYGADLP 63
D + E +SL K + +T + K AEF + + E V++ D LKE A +P
Sbjct: 46 DKDLAEFV-ISLAEKNTT-FDTFKASLVKNGAEFTTML--DEEDVKVAVDVLKELEALMP 101
Query: 64 NYLVRTLFNVIHTILHPKPKLQSKKKSGRDRKTNYKAEFENDRER 108
+ + T + K KKK R R + + + DR+R
Sbjct: 102 SAAGQEKQR--DTEHRDRTK---KKKRSRSRDRDRDRDRDRDRDR 141
>DICTYBASE|DDB_G0291183 [details] [associations]
symbol:dhx8 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0006396 "RNA processing" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=IEA;ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0291183 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GenomeReviews:CM000154_GR GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 EMBL:AAFI02000175
InterPro:IPR022967 SMART:SM00316 KO:K12818 OMA:NAWCYEN
RefSeq:XP_635385.1 HSSP:P05055 ProteinModelPortal:Q54F05
EnsemblProtists:DDB0233399 GeneID:8628033 KEGG:ddi:DDB_G0291183
ProtClustDB:CLSZ2846610 Uniprot:Q54F05
Length = 1160
Score = 2338 (828.1 bits), Expect = 4.7e-251, Sum P(2) = 4.7e-251
Identities = 445/672 (66%), Positives = 551/672 (81%)
Query: 132 SGVLASNEYPRYDXXXXXGFASWAXXX-XXXXXXXXXXXQPAFLQGQTRVSVD-LSPVKV 189
SG+L+ E P YD G + +P FL+G TR+++ LSP+K+
Sbjct: 350 SGILSVPEMPNYDKEV--GLVNHDEEQPEEDFDIERNEDEPQFLKG-TRMNMQQLSPIKI 406
Query: 190 FKNPEGSLSRTAALQSALTKERREVREQQLRTMIDSIPKDLNRPWEDPMPETGERHLAQE 249
K P GSL R A+ Q+AL+KER+E + QQ M+DSIPKDL+ PW DPMPE GERHLAQE
Sbjct: 407 VKKPNGSLQRAASTQTALSKERKEEKNQQRNEMMDSIPKDLSLPWHDPMPEAGERHLAQE 466
Query: 250 LR---GVGLSARDMPEWKKNAYGKAFTFGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQ 306
+R G G+ ++PEWKK G +G+ + SI+EQR SLPIF L+ +QAV ++Q
Sbjct: 467 IRSIAGQGIDT-EIPEWKKVTQGSHIQYGKATSRSIKEQRESLPIFPLREAFLQAVSEHQ 525
Query: 307 VLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCTQPRRVAATSVAKRVAEEFGCRLGEEV 366
+L++IGETGSGKTTQ+AQYLAEAGY T+GKIGCTQPRRVAA SV+KRVAEEFGC+LG+EV
Sbjct: 526 LLVVIGETGSGKTTQMAQYLAEAGYGTRGKIGCTQPRRVAAMSVSKRVAEEFGCQLGQEV 585
Query: 367 GYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLK 426
GYAIRFEDCT P+T+IK+MTDG+LLRE L+D NLS YSVI+LDEAHERTI+TDVLFGLLK
Sbjct: 586 GYAIRFEDCTSPETIIKFMTDGILLRECLLDPNLSAYSVIILDEAHERTISTDVLFGLLK 645
Query: 427 QLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPVDINYSRQEVTDYLDSALI 486
Q ++RRP+L++++TSATL+AE+FS YF N +F IPGRTFPVDI Y++ DYLD++LI
Sbjct: 646 QALQRRPELKVLITSATLEAEKFSKYFMNAQLFIIPGRTFPVDIRYTKDPEADYLDASLI 705
Query: 487 TVLQIHVDEPEGDILLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPVYSALPSEIQS 546
TV+QIH+ EP GDILLFLTGQEEID AC+ L E++K+LG +VP+L++LPVYSALPSE+Q+
Sbjct: 706 TVMQIHLSEPPGDILLFLTGQEEIDAACQILYERMKSLGSNVPDLIILPVYSALPSEMQT 765
Query: 547 RIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQA 606
+IFEPAPPG RKVV+ATNIAE SLTIDGI+YVIDPGF+KQ +NPK +DSLV+ PISQA
Sbjct: 766 KIFEPAPPGSRKVVIATNIAETSLTIDGIYYVIDPGFSKQKCFNPKNGMDSLVVAPISQA 825
Query: 607 SALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLS 666
+A QR+GRAGRTGPGKCYRLYTESA+++EM ++IPEIQR NL +T LTMKAMGIN+LL+
Sbjct: 826 AARQRSGRAGRTGPGKCYRLYTESAFKNEMLASSIPEIQRTNLGNTVLTMKAMGINDLLN 885
Query: 667 FDFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCS 726
FDF+DPP Q L+SAMEQLYSLGALDEEGLLT+LG+KMAEFPLDP LSKML+ASVDLGCS
Sbjct: 886 FDFMDPPPVQTLVSAMEQLYSLGALDEEGLLTRLGRKMAEFPLDPQLSKMLIASVDLGCS 945
Query: 727 DEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQPEGDHLTLLAVYEAWKAKNFSLPWC 786
DEILT++AM+ ++F RP+E+QA AD+K+A+FFQPEGDHLTLL VYE+WK FS PWC
Sbjct: 946 DEILTVVAMLSVQNVFYRPKEKQALADQKKAKFFQPEGDHLTLLNVYESWKNSKFSNPWC 1005
Query: 787 GENFVNSRSLKK 798
ENFV +RSL++
Sbjct: 1006 FENFVQARSLRR 1017
Score = 103 (41.3 bits), Expect = 4.7e-251, Sum P(2) = 4.7e-251
Identities = 25/89 (28%), Positives = 43/89 (48%)
Query: 9 ELTYLSLLSKICSELETHLGFIDKVLAEFISESGRNSETVEIFDDKLKEYGADLPNYLVR 68
+L + L S++C+ELE +G DK+LAEF+ + ++ F+ + E D P L
Sbjct: 3 KLERIELESQVCNELERFIGSGDKLLAEFVIGLADENPKLKDFNKAISENVPDFPESLSS 62
Query: 69 TLFNVIHTILHPKPKLQSKKKSGRDRKTN 97
LFN+I + + + + TN
Sbjct: 63 HLFNLIEKMKKKTTTTTNNNNNNNNNNTN 91
>FB|FBgn0086895 [details] [associations]
symbol:pea "peanuts" species:7227 "Drosophila melanogaster"
[GO:0007286 "spermatid development" evidence=IMP] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IC] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0007286 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0000381 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN EMBL:BT044222
RefSeq:NP_610928.1 UniGene:Dm.12451 SMR:A1Z9L3 STRING:A1Z9L3
EnsemblMetazoa:FBtr0087518 GeneID:36561 KEGG:dme:Dmel_CG8241
UCSC:CG8241-RA CTD:36561 FlyBase:FBgn0086895 InParanoid:A1Z9L3
OrthoDB:EOG437PVS GenomeRNAi:36561 NextBio:799212 Uniprot:A1Z9L3
Length = 1242
Score = 2208 (782.3 bits), Expect = 1.3e-244, Sum P(2) = 1.3e-244
Identities = 424/669 (63%), Positives = 528/669 (78%)
Query: 132 SGVLASNEYPRYDXXXXXGFASWAXXXXXXXXXXXXXXQPAFLQGQTRVSVDLSPVKVFK 191
SGVL +E P +D G +P FL G R DLSPV++ K
Sbjct: 430 SGVLDRSEMPDFDEET--GLLPKDEDDEADIEIEIVEEEPPFLSGHGRALHDLSPVRIVK 487
Query: 192 NPEGSLSRTAALQSALTKERREVREQQLRTMIDSIPKDLNRPWEDPMPETGERHLAQELR 251
NP+GSL++ A +QSAL+KERRE + Q I+++P LN+ W DP+PE R LA +R
Sbjct: 488 NPDGSLAQAAMMQSALSKERREQKMLQREQEIEAMPTSLNKNWIDPLPEDESRSLAANMR 547
Query: 252 GVGLSARDMPEWKKNAYG-KAFTFGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLIL 310
G+ + ++PEWKK+ G K +FG+++ L++ EQR+SLPI+KL+++LI+AV DNQ+LI+
Sbjct: 548 GMAAAPPEVPEWKKHVIGGKKSSFGKKTDLTLVEQRQSLPIYKLRDDLIKAVTDNQILIV 607
Query: 311 IGETGSGKTTQLAQYLAEAGYTTKGKIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAI 370
IGETGSGKTTQ+ QYL E G+T +GKIGCTQPRRVAA SVAKRVAEE+GCRLG+EVGY I
Sbjct: 608 IGETGSGKTTQITQYLGECGFTARGKIGCTQPRRVAAMSVAKRVAEEYGCRLGQEVGYTI 667
Query: 371 RFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVK 430
RFEDCT P+T+IKYMTDGMLLRE L++ L YSVIMLDEAHERTI+TDVLFGLLK V+
Sbjct: 668 RFEDCTSPETIIKYMTDGMLLRECLMEAELKSYSVIMLDEAHERTIHTDVLFGLLKTAVQ 727
Query: 431 RRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQ 490
+RP+L+LIVTSATLDA +FS YFF IF+IPGRTFPV++ Y+++ TDYLD++LITV+Q
Sbjct: 728 KRPELKLIVTSATLDAVKFSQYFFKAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQ 787
Query: 491 IHVDEPEGDILLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFE 550
IH+ EP GDILLFLTGQEEID ACE L E++K+LG DVPEL++LPVYSALPSE+Q+RIF+
Sbjct: 788 IHLREPPGDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFD 847
Query: 551 PAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQ 610
PAP G RKVV+ATNIAE SLTIDGIFYV+DPGF KQ VYN K +DSLV+TPISQA+A Q
Sbjct: 848 PAPAGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQAAAKQ 907
Query: 611 RAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFV 670
RAGRAGRTGPGK YRLYTE AYR EM PT +PEIQR NL T L +K MGIN+LL FDF+
Sbjct: 908 RAGRAGRTGPGKTYRLYTERAYRDEMLPTPVPEIQRTNLATTVLQLKTMGINDLLHFDFM 967
Query: 671 DPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEIL 730
D P ++L+ A+EQL+SL ALD+EGLLT+LG++MAEFPL+P LSKML+ SV L CSDEIL
Sbjct: 968 DAPPVESLVMALEQLHSLSALDDEGLLTRLGRRMAEFPLEPNLSKMLIMSVALQCSDEIL 1027
Query: 731 TIIAMIQTGHIFTRPRERQAKADEKRARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENF 790
TI++M+ ++F RP+++QA AD+K+A+F Q EGDHLTLLAVY +WK FS WC ENF
Sbjct: 1028 TIVSMLSVQNVFYRPKDKQALADQKKAKFNQAEGDHLTLLAVYNSWKNNKFSNAWCYENF 1087
Query: 791 VNSRSLKKT 799
V R+LK++
Sbjct: 1088 VQIRTLKRS 1096
Score = 172 (65.6 bits), Expect = 1.3e-244, Sum P(2) = 1.3e-244
Identities = 37/95 (38%), Positives = 61/95 (64%)
Query: 7 IRELTYLSLLSKICSELETHLGFIDKVLAEFISESGRNSETVEIFDDKLKEYGADLPNYL 66
+++L YLSL+SKIC+EL+ HLG DK LAEFI + + T + F L + GA+ P+ L
Sbjct: 4 LQKLEYLSLVSKICTELDNHLGINDKDLAEFIIDLENKNRTYDTFRKALLDNGAEFPDSL 63
Query: 67 VRTLFNVIHTILHPKPKLQSKKKSGRDRKTNYKAE 101
V+ L +I+ + +P S++K+ D+K + K++
Sbjct: 64 VQNLQRIINLMRPSRPGGASQEKTVGDKKEDKKSQ 98
Score = 49 (22.3 bits), Expect = 1.4e-231, Sum P(2) = 1.4e-231
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 76 TILHPKPKLQSK---KKSGRDRKTNYKAEFENDRERSGRYCKS 115
T++ P ++ S+ K+ RDR T ++ DR R +S
Sbjct: 161 TLVRPHKEVSSRDRHKRRSRDRDTKRRSRSREDRHSDRRRSRS 203
Score = 43 (20.2 bits), Expect = 5.9e-231, Sum P(2) = 5.9e-231
Identities = 8/36 (22%), Positives = 19/36 (52%)
Query: 81 KPKLQSKKKSGRDRKTNYKAEFENDRERSGRYCKSN 116
+ K + ++ RD + ++ + DR+R R+ S+
Sbjct: 204 RDKERRRRSRSRDNRRRSRSREDRDRDRDRRHKSSS 239
Score = 38 (18.4 bits), Expect = 2.0e-230, Sum P(2) = 2.0e-230
Identities = 9/38 (23%), Positives = 16/38 (42%)
Query: 85 QSKKKSGRDRKTNYKAEFENDRERSGRYCKSNPPMLKD 122
+S++ RDR +K+ D R +S +D
Sbjct: 222 RSREDRDRDRDRRHKSSSSRDHHERRRRSRSRSTERRD 259
>ASPGD|ASPL0000070923 [details] [associations]
symbol:AN4721 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003723
EMBL:BN001303 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 EMBL:AACD01000080 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
OMA:NAWCYEN OrthoDB:EOG45TGW9 RefSeq:XP_662325.1
ProteinModelPortal:Q5B409 EnsemblFungi:CADANIAT00005708
GeneID:2872518 KEGG:ani:AN4721.2 Uniprot:Q5B409
Length = 1241
Score = 2189 (775.6 bits), Expect = 2.0e-239, Sum P(2) = 2.0e-239
Identities = 422/713 (59%), Positives = 542/713 (76%)
Query: 93 DRKTNYKAEFENDRERSGRYCKSNPPMLKD--MPVSRMGGVSGVLASNEYPRYDXXXXXG 150
DR N A+ E GR K+ + + ++ SG +++ +YP D
Sbjct: 377 DRYGNLSADVPVIEESDGRSMKNRKRLTSPERWEIKQLIA-SGAVSAADYPDIDEEYHAT 435
Query: 151 FASWAXXXXXXXXXXXXXXQ-PAFLQGQTRVSVDLSPVKVFKNPEGSLSRTAALQSALTK 209
+ PAFL GQT++S++LSP++V K P+GS++R+A + L K
Sbjct: 436 LTGEGTFEEEEDIDIEVRDEEPAFLAGQTKMSLELSPIRVVKAPDGSMNRSAMAGTNLAK 495
Query: 210 ERREVREQQLRTMI--DSIPKDLNRPWEDPMPETGERHLAQELRGVGLSARD--MPEWKK 265
ERRE+R+Q+ + + DLN W+DPM ER A +LR + D +PEWK+
Sbjct: 496 ERRELRQQEAQDKAAEQAAGVDLNAQWQDPM--ASERKFAADLRSTQQTGTDEAVPEWKR 553
Query: 266 NAYGKAFTFGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQY 325
GK +FG+R+ +SI++QR SLP++K + +L++AV +NQ+LI++G+TGSGKTTQ+ QY
Sbjct: 554 VTMGKTPSFGKRTNMSIKQQRESLPVYKFRQQLLEAVAENQLLIVVGDTGSGKTTQVTQY 613
Query: 326 LAEAGYTTKGKIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYM 385
LAEAG+ KG IGCTQPRRVAA SVAKRVAEE GC+LG EVGY IRFEDCT P+T IKYM
Sbjct: 614 LAEAGWANKGIIGCTQPRRVAAMSVAKRVAEEVGCKLGAEVGYTIRFEDCTSPETKIKYM 673
Query: 386 TDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLD 445
TDGML RE+L+D +L +YSVIMLDEAHERTI TDVLFGLLK +KRRPDLRLIVTSATLD
Sbjct: 674 TDGMLQREVLLDPDLKKYSVIMLDEAHERTIATDVLFGLLKTTLKRRPDLRLIVTSATLD 733
Query: 446 AERFSGYFFNCNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLT 505
A++FS YF+ C IFSIPGRTFPV+I YS++ +DYLD+ALITV+QIH+ EP GD+LLFLT
Sbjct: 734 ADKFSEYFYGCPIFSIPGRTFPVEIMYSKEPESDYLDAALITVMQIHLTEPPGDMLLFLT 793
Query: 506 GQEEIDFACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNI 565
GQEEID ACE L E++KALG VPELV+LPVYSALPSE+QSRIF+PAPPGGRKVV+ATNI
Sbjct: 794 GQEEIDTACEILYERMKALGPSVPELVILPVYSALPSEMQSRIFDPAPPGGRKVVIATNI 853
Query: 566 AEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYR 625
AE S+TID I+YVIDPGF KQ Y+PK +DSLV+TPISQA A QRAGRAGRTGPGKC+R
Sbjct: 854 AETSITIDNIYYVIDPGFVKQKAYDPKLGMDSLVVTPISQAQAKQRAGRAGRTGPGKCFR 913
Query: 626 LYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQL 685
LYTE+AY+SEM PTTIP+IQR NL HT L +KAMGIN+LL FDF+DPP +++A+E+L
Sbjct: 914 LYTEAAYQSEMLPTTIPDIQRQNLSHTILMLKAMGINDLLHFDFMDPPPTNTMLTALEEL 973
Query: 686 YSLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRP 745
Y+L ALD+EGLLT+LG+KMA+FP++P L+K+L+ASVD+GCS+E+L+I+AM+ +F RP
Sbjct: 974 YALSALDDEGLLTRLGRKMADFPMEPALAKVLIASVDMGCSEEMLSIVAMLSIQSVFYRP 1033
Query: 746 RERQAKADEKRARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
+E+Q +AD+K+A+F P GDHLTLL VY AWK FS WC ENF+ +R +++
Sbjct: 1034 KEKQQQADQKKAKFHDPHGDHLTLLNVYNAWKRSGFSNAWCYENFIQARQIRR 1086
Score = 142 (55.0 bits), Expect = 2.0e-239, Sum P(2) = 2.0e-239
Identities = 34/92 (36%), Positives = 54/92 (58%)
Query: 7 IRELTYLSLLSKICSELETHLGFIDKVLAEFISESGRNSETVEIFDDKLKEYGADL-PNY 65
++ L +LSL+S+I +EL+ HLG DKVLAE+I E + F L+ G DL P
Sbjct: 4 LQSLEHLSLISRITNELQNHLGVSDKVLAEYIIEQHLKCSSFAEFKSALEAMGGDLFPMS 63
Query: 66 LVRTLFNVIHTILHPKPKLQSKKKSGRDRKTN 97
L+ ++ ++ T +HP+ K ++KK G + N
Sbjct: 64 LMESVDRLVLT-MHPRYKNKNKKDRGDEHVEN 94
>UNIPROTKB|F1P306 [details] [associations]
symbol:LOC100858239 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967
SMART:SM00316 GeneTree:ENSGT00700000104241 EMBL:AADN02070153
EMBL:AADN02070154 IPI:IPI00591627 Ensembl:ENSGALT00000001801
OMA:AMANTAM Uniprot:F1P306
Length = 1168
Score = 2091 (741.1 bits), Expect = 2.2e-231, Sum P(2) = 2.2e-231
Identities = 390/557 (70%), Positives = 481/557 (86%)
Query: 244 RHLAQELRGVGLSARDMPEWKKNAYG--KAFTFGQRSKLSIQEQRRSLPIFKLKNELIQA 301
R +A +RG+G+ D+PEWKK+A+G KA ++G++++LSI EQR SLPIF+LK +LIQA
Sbjct: 467 RQIAANMRGIGMMPNDIPEWKKHAFGGNKA-SYGKKTQLSIIEQRESLPIFRLKEQLIQA 525
Query: 302 VHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCTQPRRVAATSVAKRVAEEFGCR 361
VHDNQ+LI+IGETGSGKTTQ+ QYLAEAGYT++GKIGCTQPRRVAA SVAKRV+EEFGC
Sbjct: 526 VHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCC 585
Query: 362 LGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVL 421
LG+EVGY IRFEDCT P+TVIKYMTDGMLLRE LID +L+QY++IMLDEAHERTI+TDVL
Sbjct: 586 LGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVL 645
Query: 422 FGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPVDINYSRQEVTDYL 481
FGLLK+ V++R D++LIVTSATLDA +FS YF+ IF+IPGRT+PV+I Y+++ TDYL
Sbjct: 646 FGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYL 705
Query: 482 DSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPVYSALP 541
D++LITV+QIH+ EP GDIL+FLTGQEEID ACE L E++K+LG DVPEL++LPVYSALP
Sbjct: 706 DASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALP 765
Query: 542 SEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVIT 601
SE+Q+RIF+PAPPG RKVV+ATNIAE SLTIDGI+YV+DPGF KQ VYN K +D LV+T
Sbjct: 766 SEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVT 825
Query: 602 PISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGI 661
PISQA A QRAGRAGRTGPGKCYRLYTE AYR EM T +PEIQR NL T L++KAMGI
Sbjct: 826 PISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGI 885
Query: 662 NNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLASV 721
N+LLSFDF+D P + LI+AMEQLY+LGALD+EGLLT+LG++MAEFPL+P L KML+ SV
Sbjct: 886 NDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSV 945
Query: 722 DLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQPEGDHLTLLAVYEAWKAKNF 781
LGCS+E+LTI++M+ ++F RP+++QA AD+K+A+F Q EGDHLTLLAVY +WK F
Sbjct: 946 HLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKF 1005
Query: 782 SLPWCGENFVNSRSLKK 798
S PWC ENF+ +RSL++
Sbjct: 1006 SNPWCYENFIQARSLRR 1022
Score = 164 (62.8 bits), Expect = 2.2e-231, Sum P(2) = 2.2e-231
Identities = 41/122 (33%), Positives = 67/122 (54%)
Query: 2 ALDNGIRELTYLSLLSKICSELETHLGFIDKVLAEFISESGRNSETVEIFDDKLKEYGAD 61
AL+ + +L YLSL+SK+C+EL+ HLG DK LAEF+ + T + F L + GA+
Sbjct: 11 ALEE-LAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKNTTFDTFKAVLIKNGAE 69
Query: 62 LPNYLVRTLFNVIHTILHPKPKLQSKKKSGRDRKTNYKAEFENDRERSGRYCKSNPPMLK 121
+ L+ L +I T+ P SK + ++ T K+E E +E C+ + P ++
Sbjct: 70 FTDSLISNLLRLIQTMRPP-----SKPSTSKEVVTKPKSEKERLKELFPALCRPDNPNVR 124
Query: 122 DM 123
+M
Sbjct: 125 NM 126
>UNIPROTKB|G4NFJ0 [details] [associations]
symbol:MGG_08807 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:CM001236 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 KO:K12818 RefSeq:XP_003719164.1
ProteinModelPortal:G4NFJ0 EnsemblFungi:MGG_08807T0 GeneID:2678973
KEGG:mgr:MGG_08807 Uniprot:G4NFJ0
Length = 1207
Score = 2110 (747.8 bits), Expect = 3.8e-227, Sum P(2) = 3.8e-227
Identities = 399/674 (59%), Positives = 518/674 (76%)
Query: 132 SGVLASNEYPRYDXXXXXGFASWAXXXXXXXXXXXXXXQ-PAFLQGQTRVSVDLSPVKVF 190
SGV +++YP + + + P FL GQT+ S++LSP++V
Sbjct: 378 SGVAKASDYPELEEDYNNALSGEGQMELEEDVDIEIRDEEPPFLAGQTKQSLELSPIRVV 437
Query: 191 KNPEGSLSRTAALQSALTKERREVREQQLRTMIDSIPK----DLNRPWEDPMPETGERHL 246
K P+GSL+R A ++L KER+E+R+Q+ + DL WEDPM + +R
Sbjct: 438 KAPDGSLNRAAMAGTSLVKERKEIRQQEAEAAAQAAATNGKVDLASQWEDPMADPDKRKF 497
Query: 247 AQELRGV--GLSARDMPEWKKNAYGKAFTFGQRSKLSIQEQRRSLPIFKLKNELIQAVHD 304
A ++R + +PEW++ K +FG+R+ ++I++QR SLP+F + +LI+AV +
Sbjct: 498 AADMRRTMQNRPSEAVPEWRQAIAPKNQSFGKRTNMTIKQQRESLPVFAFREQLIKAVKE 557
Query: 305 NQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCTQPRRVAATSVAKRVAEEFGCRLGE 364
NQ++I++GETGSGKTTQL QYLAEAG+ +G IGCTQPRRVAA SVAKRV+EE GC LG+
Sbjct: 558 NQIMIVVGETGSGKTTQLTQYLAEAGFANEGVIGCTQPRRVAAMSVAKRVSEEVGCELGQ 617
Query: 365 EVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGL 424
EVGY IRFEDCT P T IKYMTDGML REI+ID +L +YSVIMLDEAHERTI TDVLF L
Sbjct: 618 EVGYTIRFEDCTSPATRIKYMTDGMLQREIVIDPDLKRYSVIMLDEAHERTIATDVLFAL 677
Query: 425 LKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPVDINYSRQEVTDYLDSA 484
LK+ +RRPDL++IVTSATLDA++FS YF C IF+IPGRTFPV+I YS+ +DYLD+A
Sbjct: 678 LKKATRRRPDLKIIVTSATLDADKFSAYFNECPIFTIPGRTFPVEILYSKDPESDYLDAA 737
Query: 485 LITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPVYSALPSEI 544
L TV+QIH+DEP GDILLFLTGQEEID +CE L E++KALG VPEL++LPVYSALP+E+
Sbjct: 738 LTTVMQIHIDEPPGDILLFLTGQEEIDTSCEILFERMKALGPSVPELIILPVYSALPNEM 797
Query: 545 QSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPIS 604
QSRIF+PAPPG RKVV+ATNIAE S+TID I+YV+DPGF KQN Y+PK +DSLV+TPIS
Sbjct: 798 QSRIFDPAPPGSRKVVIATNIAETSITIDHIYYVVDPGFVKQNAYDPKLGMDSLVVTPIS 857
Query: 605 QASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNL 664
QA A QRAGRAGRTGPGKC+RLYTE+AY++EM PT+IPEIQR NL +T L +KAMGIN+L
Sbjct: 858 QAQANQRAGRAGRTGPGKCFRLYTEAAYQTEMLPTSIPEIQRQNLSNTILLLKAMGINDL 917
Query: 665 LSFDFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLG 724
L FDF+DPP +++A+E+LY+L ALD+EGLLT+LG+KMA+FP++P LSK+L+ASV++
Sbjct: 918 LHFDFMDPPPINTMLTALEELYALSALDDEGLLTRLGRKMADFPMEPSLSKVLIASVEMR 977
Query: 725 CSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQPEGDHLTLLAVYEAWKAKNFSLP 784
CSDE+L+I+AM+ ++F RP+E+Q +AD K+A+F P GDHLTLL VY AWK +S P
Sbjct: 978 CSDEMLSIVAMLNLPNVFYRPKEKQTQADAKKAKFHDPNGDHLTLLNVYNAWKQSRYSKP 1037
Query: 785 WCGENFVNSRSLKK 798
WC ENF+ R+L +
Sbjct: 1038 WCAENFIQFRALTR 1051
Score = 105 (42.0 bits), Expect = 3.8e-227, Sum P(2) = 3.8e-227
Identities = 30/116 (25%), Positives = 54/116 (46%)
Query: 7 IRELTYLSLLSKICSELETHLGFIDKVLAEFISESGRNSETVEIFDDKLKEYGADLPNYL 66
+ L LSL+SK+ SEL+ H+G DK LA++I + + E F K + + P L
Sbjct: 4 LENLELLSLVSKVTSELKNHMGVDDKDLADYIIANRLECDGFEAFK-KWMDSECEFPPSL 62
Query: 67 VRTLFNVIHTILHPKPKLQSKKKSGRDRKTNYKAEFENDRERSGRYCKSNPPMLKD 122
+ ++ ++ + +HPK + S+ T + + + + G P L D
Sbjct: 63 IESIDRLVRS-MHPKLRNSSQNADLSAPTTTGRTQEQKNELFKGLAVADTQPALAD 117
>WB|WBGene00003393 [details] [associations]
symbol:mog-5 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0002009 "morphogenesis
of an epithelium" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0048589 "developmental growth" evidence=IMP]
[GO:0010172 "embryonic body morphogenesis" evidence=IMP]
[GO:0040022 "feminization of hermaphroditic germ-line"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 2066 (732.3 bits), Expect = 5.1e-223, Sum P(2) = 5.1e-223
Identities = 396/634 (62%), Positives = 501/634 (79%)
Query: 170 QPAFLQGQTRVSVDLSPVKVFKNPEGSLSRTAALQSALTKERRE--VREQQLRTMIDSIP 227
+P FL+G + ++ PVKV KNP+GSL++ A +Q AL+KER+E ++ Q+ R M
Sbjct: 417 EPDFLRGYGKGGAEIEPVKVVKNPDGSLAQAALMQGALSKERKETKIQAQRERDMDTQKG 476
Query: 228 KDLNRPWEDPMP-ETGERHLAQELRGVGLSARDMPEWKKN--AYGKAFTFGQRSKLSIQE 284
N DPM A E + ++MPEW K+ A GKA T+G+R+ LS+ E
Sbjct: 477 FSSNARILDPMSGNQSTAWSADESKDRNNKMKEMPEWLKHVTAGGKA-TYGRRTNLSMVE 535
Query: 285 QRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCTQPRR 344
QR SLPIF LK L++A+ DNQ+L+++GETGSGKTTQ+ QY EAG +GKIGCTQPRR
Sbjct: 536 QRESLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIEAGLGRRGKIGCTQPRR 595
Query: 345 VAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYS 404
VAA SVAKRVAEE+GC+LG +VGY IRFEDCT DT+IKYMTDGMLLRE LID +LS YS
Sbjct: 596 VAAMSVAKRVAEEYGCKLGTDVGYTIRFEDCTSQDTIIKYMTDGMLLRECLIDPDLSGYS 655
Query: 405 VIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGR 464
+IMLDEAHERTI+TDVLFGLLK ++RP+L+LI+TSATLD+ +FS YF IF+IPGR
Sbjct: 656 LIMLDEAHERTIHTDVLFGLLKAAARKRPELKLIITSATLDSVKFSEYFLEAPIFTIPGR 715
Query: 465 TFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEKIKAL 524
TFPV+I Y+R+ +DYL++A ITV+QIH+ EP GD+L+FLTGQEEID +CE L E++K++
Sbjct: 716 TFPVEILYTREPESDYLEAAHITVMQIHLTEPPGDVLVFLTGQEEIDTSCEVLYERMKSM 775
Query: 525 GKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFA 584
G DVPEL++LPVY ALPSE+Q+RIF+PAP G RKVV+ATNIAE SLTIDGIFYV+DPGF
Sbjct: 776 GPDVPELIILPVYGALPSEMQTRIFDPAPAGKRKVVIATNIAETSLTIDGIFYVVDPGFV 835
Query: 585 KQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEI 644
KQ +YNPK +DSLV+TPISQA+A QR+GRAGRTGPGKCYRLYTE A+R EM PT +PEI
Sbjct: 836 KQKIYNPKSGMDSLVVTPISQAAAKQRSGRAGRTGPGKCYRLYTERAFRDEMLPTPVPEI 895
Query: 645 QRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKM 704
QR NL T L +KAMGINNL+ FDF+D P ++I+A+ L++L ALD +GLLTKLG++M
Sbjct: 896 QRTNLASTLLQLKAMGINNLIDFDFMDAPPLDSMITALNTLHTLSALDGDGLLTKLGRRM 955
Query: 705 AEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQPEG 764
AEFPL+P LSK+L+ SVDLGCS+E+LTI+AM+ +IF RP+E+Q AD+K+A+F QPEG
Sbjct: 956 AEFPLEPSLSKLLIMSVDLGCSEEVLTIVAMLNVQNIFYRPKEKQDHADQKKAKFHQPEG 1015
Query: 765 DHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
DHLTLLAVY +WK +FS PWC ENF+ RS+K+
Sbjct: 1016 DHLTLLAVYNSWKNHHFSQPWCFENFIQVRSMKR 1049
Score = 110 (43.8 bits), Expect = 5.1e-223, Sum P(2) = 5.1e-223
Identities = 27/99 (27%), Positives = 49/99 (49%)
Query: 9 ELTYLSLLSKICSELETHLGFIDKVLAEFISESGRNSETVEIFDDKLKEYGA--DLPNYL 66
+L +LSL+SK+ SE+E H G ++K +AEF+ + + T + L G + L
Sbjct: 3 QLEHLSLVSKVLSEVENHFGVVEKDVAEFVIHLAQENPTFDKLKKALDSQGLGDQFDDSL 62
Query: 67 VRTLFNVIHTILHPKPKLQSKKKSGRDRKTNYKAEFEND 105
T+ ++ ++ K K + S D K ++K +D
Sbjct: 63 TATILRIVQSMTAVKKKNKKGGDSKEDIKDSHKITLISD 101
Score = 40 (19.1 bits), Expect = 1.3e-215, Sum P(2) = 1.3e-215
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 85 QSKKKSGRDRKTNYKAEFENDRERSGR 111
+S+ +S RDRK + DR R R
Sbjct: 158 RSRSRS-RDRKRRRSRSGDRDRRRRSR 183
Score = 37 (18.1 bits), Expect = 2.7e-215, Sum P(2) = 2.7e-215
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 87 KKKSGRDRKTNYKAEFENDRERSGR 111
+ +S DR+ + + + DR+R GR
Sbjct: 181 RSRSREDRRDRDRRDRDRDRDR-GR 204
>UNIPROTKB|Q09530 [details] [associations]
symbol:mog-5 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 2066 (732.3 bits), Expect = 5.1e-223, Sum P(2) = 5.1e-223
Identities = 396/634 (62%), Positives = 501/634 (79%)
Query: 170 QPAFLQGQTRVSVDLSPVKVFKNPEGSLSRTAALQSALTKERRE--VREQQLRTMIDSIP 227
+P FL+G + ++ PVKV KNP+GSL++ A +Q AL+KER+E ++ Q+ R M
Sbjct: 417 EPDFLRGYGKGGAEIEPVKVVKNPDGSLAQAALMQGALSKERKETKIQAQRERDMDTQKG 476
Query: 228 KDLNRPWEDPMP-ETGERHLAQELRGVGLSARDMPEWKKN--AYGKAFTFGQRSKLSIQE 284
N DPM A E + ++MPEW K+ A GKA T+G+R+ LS+ E
Sbjct: 477 FSSNARILDPMSGNQSTAWSADESKDRNNKMKEMPEWLKHVTAGGKA-TYGRRTNLSMVE 535
Query: 285 QRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCTQPRR 344
QR SLPIF LK L++A+ DNQ+L+++GETGSGKTTQ+ QY EAG +GKIGCTQPRR
Sbjct: 536 QRESLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIEAGLGRRGKIGCTQPRR 595
Query: 345 VAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYS 404
VAA SVAKRVAEE+GC+LG +VGY IRFEDCT DT+IKYMTDGMLLRE LID +LS YS
Sbjct: 596 VAAMSVAKRVAEEYGCKLGTDVGYTIRFEDCTSQDTIIKYMTDGMLLRECLIDPDLSGYS 655
Query: 405 VIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGR 464
+IMLDEAHERTI+TDVLFGLLK ++RP+L+LI+TSATLD+ +FS YF IF+IPGR
Sbjct: 656 LIMLDEAHERTIHTDVLFGLLKAAARKRPELKLIITSATLDSVKFSEYFLEAPIFTIPGR 715
Query: 465 TFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEKIKAL 524
TFPV+I Y+R+ +DYL++A ITV+QIH+ EP GD+L+FLTGQEEID +CE L E++K++
Sbjct: 716 TFPVEILYTREPESDYLEAAHITVMQIHLTEPPGDVLVFLTGQEEIDTSCEVLYERMKSM 775
Query: 525 GKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFA 584
G DVPEL++LPVY ALPSE+Q+RIF+PAP G RKVV+ATNIAE SLTIDGIFYV+DPGF
Sbjct: 776 GPDVPELIILPVYGALPSEMQTRIFDPAPAGKRKVVIATNIAETSLTIDGIFYVVDPGFV 835
Query: 585 KQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEI 644
KQ +YNPK +DSLV+TPISQA+A QR+GRAGRTGPGKCYRLYTE A+R EM PT +PEI
Sbjct: 836 KQKIYNPKSGMDSLVVTPISQAAAKQRSGRAGRTGPGKCYRLYTERAFRDEMLPTPVPEI 895
Query: 645 QRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKM 704
QR NL T L +KAMGINNL+ FDF+D P ++I+A+ L++L ALD +GLLTKLG++M
Sbjct: 896 QRTNLASTLLQLKAMGINNLIDFDFMDAPPLDSMITALNTLHTLSALDGDGLLTKLGRRM 955
Query: 705 AEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQPEG 764
AEFPL+P LSK+L+ SVDLGCS+E+LTI+AM+ +IF RP+E+Q AD+K+A+F QPEG
Sbjct: 956 AEFPLEPSLSKLLIMSVDLGCSEEVLTIVAMLNVQNIFYRPKEKQDHADQKKAKFHQPEG 1015
Query: 765 DHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
DHLTLLAVY +WK +FS PWC ENF+ RS+K+
Sbjct: 1016 DHLTLLAVYNSWKNHHFSQPWCFENFIQVRSMKR 1049
Score = 110 (43.8 bits), Expect = 5.1e-223, Sum P(2) = 5.1e-223
Identities = 27/99 (27%), Positives = 49/99 (49%)
Query: 9 ELTYLSLLSKICSELETHLGFIDKVLAEFISESGRNSETVEIFDDKLKEYGA--DLPNYL 66
+L +LSL+SK+ SE+E H G ++K +AEF+ + + T + L G + L
Sbjct: 3 QLEHLSLVSKVLSEVENHFGVVEKDVAEFVIHLAQENPTFDKLKKALDSQGLGDQFDDSL 62
Query: 67 VRTLFNVIHTILHPKPKLQSKKKSGRDRKTNYKAEFEND 105
T+ ++ ++ K K + S D K ++K +D
Sbjct: 63 TATILRIVQSMTAVKKKNKKGGDSKEDIKDSHKITLISD 101
Score = 40 (19.1 bits), Expect = 1.3e-215, Sum P(2) = 1.3e-215
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 85 QSKKKSGRDRKTNYKAEFENDRERSGR 111
+S+ +S RDRK + DR R R
Sbjct: 158 RSRSRS-RDRKRRRSRSGDRDRRRRSR 183
Score = 37 (18.1 bits), Expect = 2.7e-215, Sum P(2) = 2.7e-215
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 87 KKKSGRDRKTNYKAEFENDRERSGR 111
+ +S DR+ + + + DR+R GR
Sbjct: 181 RSRSREDRRDRDRRDRDRDRDR-GR 204
>POMBASE|SPAC10F6.02c [details] [associations]
symbol:prp22 "ATP-dependent RNA helicase Prp22"
species:4896 "Schizosaccharomyces pombe" [GO:0000390 "spliceosomal
complex disassembly" evidence=ISS] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
PomBase:SPAC10F6.02c GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0005681 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GO:GO:0000390 KO:K12818
OMA:NAWCYEN PIR:T37496 RefSeq:NP_593253.1 ProteinModelPortal:O42643
IntAct:O42643 STRING:O42643 PRIDE:O42643
EnsemblFungi:SPAC10F6.02c.1 GeneID:2542978 KEGG:spo:SPAC10F6.02c
OrthoDB:EOG45TGW9 NextBio:20804011 Uniprot:O42643
Length = 1168
Score = 2061 (730.6 bits), Expect = 1.3e-222, Sum P(2) = 1.3e-222
Identities = 393/634 (61%), Positives = 501/634 (79%)
Query: 170 QPAFLQGQTRVSVDLSPVKVFKNPEGSLSRTAALQSALTKERREVREQQ--LRTMIDSIP 227
+P FL GQT+VS+ LSP+KV K P+GSLSR A L +RRE+R+++ L++ +
Sbjct: 387 EPGFLAGQTKVSLKLSPIKVVKAPDGSLSRAAMQGQILANDRREIRQKEAKLKSEQEMEK 446
Query: 228 KDLNRPWEDPMPETGERHLAQELRGVGLS--ARDMPEWKKNAYGKAFTFGQRSKLSIQEQ 285
+DL+ W+D M +R AQ++R + P W++ ++G+R+ LS++EQ
Sbjct: 447 QDLSLSWQDTMSNPQDRKFAQDVRDSAARQLTSETPSWRQATRNANISYGKRTTLSMKEQ 506
Query: 286 RRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGK-IGCTQPRR 344
R LP+FKL+ + ++AV NQ+L+L+GETGSGKTTQ+ QYLAE GYT+ K IGCTQPRR
Sbjct: 507 REGLPVFKLRKQFLEAVSKNQILVLLGETGSGKTTQITQYLAEEGYTSDSKMIGCTQPRR 566
Query: 345 VAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYS 404
VAA SVAKRVAEE GCR+GEEVGY IRFED T T IKYMTDGML RE L+D LS+YS
Sbjct: 567 VAAMSVAKRVAEEVGCRVGEEVGYTIRFEDKTSRMTQIKYMTDGMLQRECLVDPLLSKYS 626
Query: 405 VIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGR 464
VI+LDEAHERT+ TDVLFGLLK V +RPDL+LIVTSATLDAERFS YF+ C IF+IPGR
Sbjct: 627 VIILDEAHERTVATDVLFGLLKGTVLKRPDLKLIVTSATLDAERFSSYFYKCPIFTIPGR 686
Query: 465 TFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEKIKAL 524
++PV+I Y++Q DYLD+AL+TV+QIH+ E GDIL+FLTGQEEID +CE L E+ K L
Sbjct: 687 SYPVEIMYTKQPEADYLDAALMTVMQIHLSEGPGDILVFLTGQEEIDTSCEILYERSKML 746
Query: 525 GKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFA 584
G +PELV+LPVYSALPSEIQSRIFEPAPPGGRKVV+ATNIAE SLTIDGI+YV+DPGF
Sbjct: 747 GDSIPELVILPVYSALPSEIQSRIFEPAPPGGRKVVIATNIAETSLTIDGIYYVVDPGFV 806
Query: 585 KQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEI 644
KQ+ ++PK +DSL++TPISQA A QR+GRAGRTGPGKCYRLYTESAYR+EM P+ IPEI
Sbjct: 807 KQSCFDPKLGMDSLIVTPISQAQARQRSGRAGRTGPGKCYRLYTESAYRNEMLPSPIPEI 866
Query: 645 QRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKM 704
QR NL HT L +KAMGIN+LL+FDF+DPP Q +I+A++ LY+L ALD+EGLLT LG+KM
Sbjct: 867 QRQNLSHTILMLKAMGINDLLNFDFMDPPPAQTMIAALQNLYALSALDDEGLLTPLGRKM 926
Query: 705 AEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQPEG 764
A+FP++P LSK+L+ SV+LGCS+E+L+IIAM+ +I++RPRE+Q +AD +RA+F PE
Sbjct: 927 ADFPMEPQLSKVLITSVELGCSEEMLSIIAMLSVPNIWSRPREKQQEADRQRAQFANPES 986
Query: 765 DHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
DHLTLL VY WK S WC E+++ +R +++
Sbjct: 987 DHLTLLNVYTTWKMNRCSDNWCYEHYIQARGMRR 1020
Score = 111 (44.1 bits), Expect = 1.3e-222, Sum P(2) = 1.3e-222
Identities = 26/77 (33%), Positives = 41/77 (53%)
Query: 7 IRELTYLSLLSKICSELETHLGFIDKVLAEFISESGRNSETVEIFDDKLKEYGADLPNYL 66
++EL YLSL+SK+ SE+ H G D LAEFI S+ + F + + G + +
Sbjct: 4 LKELEYLSLVSKVASEIRNHTGIDDNTLAEFIINLHDQSKNYDEFKNNVLSCGGEFTDSF 63
Query: 67 VRTLFNVIHTILHPKPK 83
++ + +I I KPK
Sbjct: 64 LQNISRLIKEI---KPK 77
>GENEDB_PFALCIPARUM|PF10_0294 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 1976 (700.6 bits), Expect = 5.9e-212, Sum P(3) = 5.9e-212
Identities = 371/631 (58%), Positives = 491/631 (77%)
Query: 170 QPAFLQGQT-RVSVDLSPVKVFKNPEGSLSRTAALQSALTKERREVREQQLRTMIDSIPK 228
+PAFL+GQT + LSP+++ N EGSL++ SAL KER+E ++ + + D+IPK
Sbjct: 512 EPAFLKGQTTKAGAKLSPIQIIVNAEGSLAKAITTTSALAKERKEQKQNEQNAIYDNIPK 571
Query: 229 DLNRPWEDPMPETGERHLAQELRGVGLSARDMPEWKKNAYGKAFTFGQRSKLSIQEQRRS 288
D++RPWEDP P GER +A+ L+ +G + D+PEWKKN + G ++ L I EQR
Sbjct: 572 DISRPWEDPKPNLGERTIAEALKNIGKNY-DIPEWKKNYNNNNISVGVKNTLPINEQRSK 630
Query: 289 LPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCTQPRRVAAT 348
LPI+ LKN+L++A+ N VLI+IGETGSGKTTQ+ QYL EA YT KG +GCTQPRRVAA
Sbjct: 631 LPIYNLKNDLMKAIEKNNVLIVIGETGSGKTTQIPQYLHEANYTEKGIVGCTQPRRVAAM 690
Query: 349 SVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIML 408
S+AKRV+EEFGC LG+EVGY+IRF+DCT DT+IKY+TDGMLLRE L D L++YS I+L
Sbjct: 691 SIAKRVSEEFGCILGQEVGYSIRFDDCTSNDTIIKYLTDGMLLRETLSDTLLTKYSFIIL 750
Query: 409 DEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPV 468
DEAHERTI+TD+LF LLK +V++R D +LIVTSATLDAE+FS YFFN IF+IPG+ FPV
Sbjct: 751 DEAHERTISTDILFCLLKDVVRKRADFKLIVTSATLDAEKFSTYFFNSPIFTIPGKIFPV 810
Query: 469 DINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEKIKAL-GKD 527
+I +S++ +DY++++LITVL IH++E GDIL+FLTGQ+EI+ ACE L E++K L
Sbjct: 811 EILHSKEPESDYVEASLITVLNIHLNEHPGDILVFLTGQDEINTACEILHERMKKLESMS 870
Query: 528 VPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQN 587
P L++LP+YS+LPSE+QS IFEPAPPG RK ++ATNIAEASLTIDGIF+VIDPGF K
Sbjct: 871 PPPLIILPIYSSLPSEMQSVIFEPAPPGCRKCILATNIAEASLTIDGIFFVIDPGFCKIK 930
Query: 588 VYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRI 647
Y+ K+ +DSL++ PIS+A+A QRAGRAGRTGPGKCYRLYTE AY++EMS ++PEIQRI
Sbjct: 931 KYDSKRDMDSLIVAPISKANAKQRAGRAGRTGPGKCYRLYTEEAYKNEMSEMSVPEIQRI 990
Query: 648 NLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEF 707
NL L +KA+GIN+ L FDF+D PS + LI ++E LY LGALD+ G LTKLGKKMA F
Sbjct: 991 NLGSIVLLLKALGINDFLHFDFMDSPSVETLIHSLENLYYLGALDDNGYLTKLGKKMANF 1050
Query: 708 PLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQPEGDHL 767
P++P LSK+LL S++ C+D+++TI++M+ +IF RP+ + AD+K+ +F P+GD +
Sbjct: 1051 PMEPNLSKILLTSLNFNCTDDVVTIVSMLSVQNIFYRPQNKALLADKKKNKFIMPQGDLI 1110
Query: 768 TLLAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
T L +Y WK +FS WC ENF+ SR+LK+
Sbjct: 1111 TYLNIYNKWKENSFSNYWCHENFIQSRALKR 1141
Score = 71 (30.1 bits), Expect = 5.9e-212, Sum P(3) = 5.9e-212
Identities = 24/95 (25%), Positives = 47/95 (49%)
Query: 10 LTYLSLLSKICSELETHLGFIDKVLAEFISESGRNSETVEIFDDKLKEYGADLPNYLVRT 69
L+ ++L+ K+ EL +G D L+EF+ S ++E F + E G + +++
Sbjct: 4 LSKINLIRKVNEELYNSIGVEDDNLSEFLIYLCEKSTSLEEFCKDVFENGGVIEQAVLKY 63
Query: 70 LFNVIHTILHPKPKLQSKKKSGRDRKTNYKAEFEN 104
++N+I K +KKK D + + ++ EN
Sbjct: 64 IYNMI--------KKDNKKKKDHDNEDDVNSK-EN 89
Score = 41 (19.5 bits), Expect = 5.9e-212, Sum P(3) = 5.9e-212
Identities = 11/48 (22%), Positives = 22/48 (45%)
Query: 97 NYKAEFENDRERSGRYCKSNPPMLKDMPVSRMGGVSGVLASNEYPRYD 144
NY + F++ E K N + KD P + S + ++Y +++
Sbjct: 422 NYISLFDDINEDFNDLKKKNANVFKDDPKETLKYESVIKIQSDYSKWE 469
>UNIPROTKB|Q8IJA4 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008380 "RNA splicing" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 1976 (700.6 bits), Expect = 5.9e-212, Sum P(3) = 5.9e-212
Identities = 371/631 (58%), Positives = 491/631 (77%)
Query: 170 QPAFLQGQT-RVSVDLSPVKVFKNPEGSLSRTAALQSALTKERREVREQQLRTMIDSIPK 228
+PAFL+GQT + LSP+++ N EGSL++ SAL KER+E ++ + + D+IPK
Sbjct: 512 EPAFLKGQTTKAGAKLSPIQIIVNAEGSLAKAITTTSALAKERKEQKQNEQNAIYDNIPK 571
Query: 229 DLNRPWEDPMPETGERHLAQELRGVGLSARDMPEWKKNAYGKAFTFGQRSKLSIQEQRRS 288
D++RPWEDP P GER +A+ L+ +G + D+PEWKKN + G ++ L I EQR
Sbjct: 572 DISRPWEDPKPNLGERTIAEALKNIGKNY-DIPEWKKNYNNNNISVGVKNTLPINEQRSK 630
Query: 289 LPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCTQPRRVAAT 348
LPI+ LKN+L++A+ N VLI+IGETGSGKTTQ+ QYL EA YT KG +GCTQPRRVAA
Sbjct: 631 LPIYNLKNDLMKAIEKNNVLIVIGETGSGKTTQIPQYLHEANYTEKGIVGCTQPRRVAAM 690
Query: 349 SVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIML 408
S+AKRV+EEFGC LG+EVGY+IRF+DCT DT+IKY+TDGMLLRE L D L++YS I+L
Sbjct: 691 SIAKRVSEEFGCILGQEVGYSIRFDDCTSNDTIIKYLTDGMLLRETLSDTLLTKYSFIIL 750
Query: 409 DEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPV 468
DEAHERTI+TD+LF LLK +V++R D +LIVTSATLDAE+FS YFFN IF+IPG+ FPV
Sbjct: 751 DEAHERTISTDILFCLLKDVVRKRADFKLIVTSATLDAEKFSTYFFNSPIFTIPGKIFPV 810
Query: 469 DINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEKIKAL-GKD 527
+I +S++ +DY++++LITVL IH++E GDIL+FLTGQ+EI+ ACE L E++K L
Sbjct: 811 EILHSKEPESDYVEASLITVLNIHLNEHPGDILVFLTGQDEINTACEILHERMKKLESMS 870
Query: 528 VPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQN 587
P L++LP+YS+LPSE+QS IFEPAPPG RK ++ATNIAEASLTIDGIF+VIDPGF K
Sbjct: 871 PPPLIILPIYSSLPSEMQSVIFEPAPPGCRKCILATNIAEASLTIDGIFFVIDPGFCKIK 930
Query: 588 VYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRI 647
Y+ K+ +DSL++ PIS+A+A QRAGRAGRTGPGKCYRLYTE AY++EMS ++PEIQRI
Sbjct: 931 KYDSKRDMDSLIVAPISKANAKQRAGRAGRTGPGKCYRLYTEEAYKNEMSEMSVPEIQRI 990
Query: 648 NLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEF 707
NL L +KA+GIN+ L FDF+D PS + LI ++E LY LGALD+ G LTKLGKKMA F
Sbjct: 991 NLGSIVLLLKALGINDFLHFDFMDSPSVETLIHSLENLYYLGALDDNGYLTKLGKKMANF 1050
Query: 708 PLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQPEGDHL 767
P++P LSK+LL S++ C+D+++TI++M+ +IF RP+ + AD+K+ +F P+GD +
Sbjct: 1051 PMEPNLSKILLTSLNFNCTDDVVTIVSMLSVQNIFYRPQNKALLADKKKNKFIMPQGDLI 1110
Query: 768 TLLAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
T L +Y WK +FS WC ENF+ SR+LK+
Sbjct: 1111 TYLNIYNKWKENSFSNYWCHENFIQSRALKR 1141
Score = 71 (30.1 bits), Expect = 5.9e-212, Sum P(3) = 5.9e-212
Identities = 24/95 (25%), Positives = 47/95 (49%)
Query: 10 LTYLSLLSKICSELETHLGFIDKVLAEFISESGRNSETVEIFDDKLKEYGADLPNYLVRT 69
L+ ++L+ K+ EL +G D L+EF+ S ++E F + E G + +++
Sbjct: 4 LSKINLIRKVNEELYNSIGVEDDNLSEFLIYLCEKSTSLEEFCKDVFENGGVIEQAVLKY 63
Query: 70 LFNVIHTILHPKPKLQSKKKSGRDRKTNYKAEFEN 104
++N+I K +KKK D + + ++ EN
Sbjct: 64 IYNMI--------KKDNKKKKDHDNEDDVNSK-EN 89
Score = 41 (19.5 bits), Expect = 5.9e-212, Sum P(3) = 5.9e-212
Identities = 11/48 (22%), Positives = 22/48 (45%)
Query: 97 NYKAEFENDRERSGRYCKSNPPMLKDMPVSRMGGVSGVLASNEYPRYD 144
NY + F++ E K N + KD P + S + ++Y +++
Sbjct: 422 NYISLFDDINEDFNDLKKKNANVFKDDPKETLKYESVIKIQSDYSKWE 469
>SGD|S000000815 [details] [associations]
symbol:PRP22 "DEAH-box RNA-dependent ATPase/ATP-dependent RNA
helicase" species:4932 "Saccharomyces cerevisiae" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IMP] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IDA;IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IMP;IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IMP] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0071021 "U2-type post-spliceosomal complex"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 SGD:S000000815 GO:GO:0005524 KO:K01897
GO:GO:0003723 EMBL:BK006939 EMBL:U18778 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0071007 InterPro:IPR022967
SMART:SM00316 GO:GO:0000390 GeneTree:ENSGT00700000104241 KO:K12818
GO:GO:0000350 RefSeq:NP_010931.3 GeneID:856734 KEGG:sce:YER015W
OrthoDB:EOG45TGW9 EMBL:X58681 PIR:S13643 RefSeq:NP_010929.3
ProteinModelPortal:P24384 SMR:P24384 DIP:DIP-655N IntAct:P24384
MINT:MINT-648209 STRING:P24384 PaxDb:P24384 EnsemblFungi:YER013W
GeneID:856732 KEGG:sce:YER013W CYGD:YER013w OMA:QITQYLD
NextBio:982846 Genevestigator:P24384 GermOnline:YER013W
GO:GO:0071021 Uniprot:P24384
Length = 1145
Score = 1806 (640.8 bits), Expect = 3.5e-189, Sum P(2) = 3.5e-189
Identities = 349/630 (55%), Positives = 468/630 (74%)
Query: 171 PAFLQGQ-TRVSVDLSPVKVFKNPEGSLSRTAALQSALTKERREVREQQLRTMIDSIPKD 229
P FL+ Q + + K+ K P G ++R+A S ++ RE + ++ R + I K
Sbjct: 369 PKFLKDQQVKGAKKYEMPKITKVPRGFMNRSAINGSNAIRDHREEKLRKKREIEQQIRKQ 428
Query: 230 LNRPWEDPMPETGE-RHLAQELRGVGLSARDMPEWKKNAYGKAFTFGQRSKLSIQEQRRS 288
+ ++DP + R+ Q L+ + + EW+KN ++ ++G+R+ L I QR++
Sbjct: 429 --QSFDDPTKNKKDSRNEIQMLKNQLI----VTEWEKNRMNESISYGKRTSLPISAQRQT 482
Query: 289 LPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCTQPRRVAAT 348
LP++ +++ELIQAV DNQ L+++GETGSGKTTQ+ QYL E G++ G IGCTQPRRVAA
Sbjct: 483 LPVYAMRSELIQAVRDNQFLVIVGETGSGKTTQITQYLDEEGFSNYGMIGCTQPRRVAAV 542
Query: 349 SVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIML 408
SVAKRVAEE GC++G +VGY IRFED TGPDT IKYMTDGML RE L+D +S+YSVIML
Sbjct: 543 SVAKRVAEEVGCKVGHDVGYTIRFEDVTGPDTRIKYMTDGMLQREALLDPEMSKYSVIML 602
Query: 409 DEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPV 468
DEAHERT+ TDVLF LLK+ +RP+L++IVTSATL++ +FS YF NC I +IPG+TFPV
Sbjct: 603 DEAHERTVATDVLFALLKKAAIKRPELKVIVTSATLNSAKFSEYFLNCPIINIPGKTFPV 662
Query: 469 DINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEKIKALGKDV 528
++ YS+ DY+++AL V+ IH++E GDIL+FLTGQEEID CE L +++K LG +
Sbjct: 663 EVLYSQTPQMDYIEAALDCVIDIHINEGPGDILVFLTGQEEIDSCCEILYDRVKTLGDSI 722
Query: 529 PELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNV 588
EL++LPVYSALPSEIQS+IFEP P G RKVV ATNIAE S+TIDGI+YV+DPGFAK N+
Sbjct: 723 GELLILPVYSALPSEIQSKIFEPTPKGSRKVVFATNIAETSITIDGIYYVVDPGFAKINI 782
Query: 589 YNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRIN 648
YN + ++ L+++PISQA A QR GRAGRTGPGKCYRLYTESA+ +EM T+PEIQR N
Sbjct: 783 YNARAGIEQLIVSPISQAQANQRKGRAGRTGPGKCYRLYTESAFYNEMLENTVPEIQRQN 842
Query: 649 LVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFP 708
L HT L +KAMGIN+LL FDF+DPP +++A+ +LY L +LD+EG LT LGK+M+ FP
Sbjct: 843 LSHTILMLKAMGINDLLKFDFMDPPPKNLMLNALTELYHLQSLDDEGKLTNLGKEMSLFP 902
Query: 709 LDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQPEGDHLT 768
+DP LS+ LL+SVD CSDEI+TII+M+ ++F RP++RQ +AD K+A+F P GDHLT
Sbjct: 903 MDPTLSRSLLSSVDNQCSDEIVTIISMLSVQNVFYRPKDRQLEADSKKAKFHHPYGDHLT 962
Query: 769 LLAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
LL VY W+ N+S +C NF++ R LK+
Sbjct: 963 LLNVYTRWQQANYSEQYCKTNFLHFRHLKR 992
Score = 50 (22.7 bits), Expect = 3.5e-189, Sum P(2) = 3.5e-189
Identities = 23/93 (24%), Positives = 40/93 (43%)
Query: 15 LLSKICSELETHLGFIDKVLAEFISESGRNSETVEIFDDKLKEYGADLPNYLVRTLFNVI 74
L KI L+ + D V+ EF+ S+++ F ++L + L N T+F I
Sbjct: 77 LSQKINQVLKDDVNLDDPVVTEFVLSILNKSKSITEFQEQLNLMQSGLDN---ETIFK-I 132
Query: 75 HTILHPKPKLQSKKKSGRDRKTNYKAEFENDRE 107
+ I P P ++ + K K E + + E
Sbjct: 133 YQIASP-PVMKEEVSVLPSTKIPAKIEAKIEEE 164
Score = 39 (18.8 bits), Expect = 5.1e-188, Sum P(2) = 5.1e-188
Identities = 14/58 (24%), Positives = 26/58 (44%)
Query: 16 LSKICSELETHLGFIDKVLAEFISESGRNSE--TVEIFDDKLKEYGADLPN-YLVRTL 70
+S ++ H G I K E + + GR+++ T +K+K P + +R L
Sbjct: 245 ISLSMKNIDQHSGEIRKRNTESVEDRGRSNDAHTSRNMKNKIKRRALTSPERWEIRQL 302
>CGD|CAL0004768 [details] [associations]
symbol:PRP22 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0071021
"U2-type post-spliceosomal complex" evidence=IEA] [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0004768 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AACQ01000012 InterPro:IPR022967 SMART:SM00316
KO:K12818 EMBL:AACQ01000011 RefSeq:XP_721941.1 RefSeq:XP_722102.1
ProteinModelPortal:Q5AJY8 STRING:Q5AJY8 GeneID:3636272
GeneID:3636404 KEGG:cal:CaO19.11516 KEGG:cal:CaO19.4033
Uniprot:Q5AJY8
Length = 996
Score = 1785 (633.4 bits), Expect = 5.2e-184, P = 5.2e-184
Identities = 365/719 (50%), Positives = 501/719 (69%)
Query: 94 RKTNYKAEFENDRERSGRYCKSNP-PMLK-DMPVS---RMGGVSGVLASNEYPRYDXXXX 148
R N E + GRY + P P K P R SG +++++YP D
Sbjct: 145 RGINQNTGHEEPIPQRGRYQERQPRPKRKLTSPERWEIRQLISSGAVSADDYPELDQEED 204
Query: 149 XGFASWAXXXXXXXXXXXXXXQPAFLQGQTRVSVDL---SPVKVFKNPEGSLSRTAALQS 205
S +P FL+G +V+ D +P+ V N G L+++A S
Sbjct: 205 TQTES---EKTDNLHIELNDKKPDFLKG-VKVTKDFPETTPIPV--NQSGPLTKSAQRGS 258
Query: 206 ALTKERRE--VREQQLRTMIDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSARDMPEW 263
++ +E ++++ R + + +L+ DP+ +T E +L S + +W
Sbjct: 259 KFARDFKEEKFKQKKQREKEEKMQSELS----DPLFQTSEPVKNSDLDPDTESF--ISKW 312
Query: 264 KKNAYGKAFTFGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLA 323
KK+ K TFG+R+ L IQEQRR LP++ ++++L++A+ DNQ ++++GETGSGKTTQ+
Sbjct: 313 KKS--NKTETFGKRTSLPIQEQRRMLPVYAMRSQLLEAIRDNQFVVIVGETGSGKTTQIV 370
Query: 324 QYLAEAGYTTKGK----IGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPD 379
QY+ E G G IGCTQPRRVAA SVAKRV+EE GC+LG+ VGY IRFED T +
Sbjct: 371 QYIYEEGMNKVGGQTKLIGCTQPRRVAAESVAKRVSEEVGCKLGDTVGYTIRFEDVTSEN 430
Query: 380 TVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIV 439
TVIKYMTDGML RE L D N+++YSVIMLDEAHERTI TDVLF LLK K+ P+L++IV
Sbjct: 431 TVIKYMTDGMLEREALNDPNMNRYSVIMLDEAHERTIATDVLFALLKNAAKQNPNLKVIV 490
Query: 440 TSATLDAERFSGYFFNCNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGD 499
TSATLD+ +FS YF NC I +IPGRTFPV++ Y++ DYL +AL +V+QIHV EP GD
Sbjct: 491 TSATLDSNKFSRYFNNCPIITIPGRTFPVEVLYTKAPEMDYLAAALESVIQIHVSEPAGD 550
Query: 500 ILLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKV 559
IL+FLTGQEEI+ +CE+L E++K LG+++PEL++LPVYSALPSE+Q+RIFEP PPG RKV
Sbjct: 551 ILVFLTGQEEIETSCEALHERMKLLGENIPELIILPVYSALPSEMQTRIFEPTPPGSRKV 610
Query: 560 VVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTG 619
++ATNIAE S+TIDGI+YV+DPGF K N+Y+ K +DSL +TPIS+A A QR+GRAGRTG
Sbjct: 611 ILATNIAETSITIDGIYYVVDPGFVKINMYDSKLGMDSLRVTPISKAQANQRSGRAGRTG 670
Query: 620 PGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALI 679
PGKCYRLYTE AY EM P TIPEIQR NL HT L +KAMGI++L++F+F+DPPS ++
Sbjct: 671 PGKCYRLYTEQAYEKEMIPNTIPEIQRQNLSHTILMLKAMGIHDLVNFEFMDPPSTTTML 730
Query: 680 SAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTG 739
+A+E LY L ALD++G LT LG+KMA+ P++P L+K L+ SV+ C++EIL+I+AM+
Sbjct: 731 TALEDLYILDALDDDGNLTTLGRKMADLPMEPALAKTLIQSVEYECTEEILSIVAMLSVQ 790
Query: 740 HIFTRPRERQAKADEKRARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
IF RP+++QA AD++++RF GDHLTLL V+++W N+S WC +NF+ RS+++
Sbjct: 791 TIFYRPKDKQALADQRKSRFHHSLGDHLTLLNVFQSWCRNNYSKTWCRDNFIQERSMRR 849
>DICTYBASE|DDB_G0285937 [details] [associations]
symbol:dhx16 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR002483 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01480
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285937 GO:GO:0005524
GO:GO:0005634 GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 EMBL:AAFI02000082 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 Gene3D:1.20.1390.10 KO:K12813 GO:GO:0003724
RefSeq:XP_638017.1 EnsemblProtists:DDB0233398 GeneID:8625368
KEGG:ddi:DDB_G0285937 OMA:YLLEREV Uniprot:Q54MH3
Length = 1106
Score = 1674 (594.3 bits), Expect = 8.1e-177, Sum P(3) = 8.1e-177
Identities = 309/523 (59%), Positives = 411/523 (78%)
Query: 277 RSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGK 336
++K++IQE R+SLP++ + +LI AV + QVLI++GETGSGKTTQ+ QYL EAG++ GK
Sbjct: 455 QAKMTIQEVRKSLPVYPYREQLIDAVREYQVLIIVGETGSGKTTQIPQYLHEAGFSKTGK 514
Query: 337 IGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILI 396
IGCTQPRRVAA SVA RVAEE GC+LG EVGY+IRFEDCT TV++YMTDGML+RE L
Sbjct: 515 IGCTQPRRVAAMSVAARVAEEVGCKLGNEVGYSIRFEDCTSQKTVLQYMTDGMLVREFLT 574
Query: 397 DENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNC 456
+L+ YSV+++DEAHERT++TD+LFGLLK + + RPDL+L+++SAT+DAERFS YF
Sbjct: 575 APDLASYSVLIIDEAHERTLHTDILFGLLKDITRFRPDLKLLISSATMDAERFSDYFDGA 634
Query: 457 NIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACES 516
F+IPGR + V +Y++ DYLD+A++TVLQIH+ EP GDIL+FLTGQEE+D A E
Sbjct: 635 PTFNIPGRKYEVTTHYTQAPEADYLDAAVVTVLQIHITEPLGDILVFLTGQEEVDQAAEM 694
Query: 517 LCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIF 576
L + + LG + EL++ +YS LP+++Q++IFEP PP RKVV+ATNIAE SLTIDGI
Sbjct: 695 LQTRTRGLGTKIKELIITRIYSTLPTDLQAKIFEPTPPNARKVVLATNIAETSLTIDGII 754
Query: 577 YVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEM 636
YVIDPGF KQ ++NP+ ++SLVITP+S+ASA QR GRAGR PGKC+RL+T A+ +E+
Sbjct: 755 YVIDPGFCKQKMFNPRTGMESLVITPVSRASANQRKGRAGRVAPGKCFRLFTAWAFDNEL 814
Query: 637 SPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGL 696
TIPEIQR NL + L +K+MGIN+L++FDF+DPP Q LI+A+EQLY+LGAL++ G
Sbjct: 815 EENTIPEIQRTNLGNVVLLLKSMGINDLMNFDFMDPPPAQTLIAALEQLYALGALNDRGQ 874
Query: 697 LTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGH-IFTRPRERQAKADEK 755
LTKLG+KMAEFP+DP LSKM++AS CS+EILTI AM+ G+ IF RP+++ AD
Sbjct: 875 LTKLGRKMAEFPVDPQLSKMIIASEKYKCSEEILTICAMLSVGNTIFYRPKDKAFAADAA 934
Query: 756 RARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
R FF P+GDHLTL+ V+ W+ +++ WC ENF+ RS+K+
Sbjct: 935 RKLFFHPQGDHLTLMNVFNQWRESGYAVQWCFENFIQHRSMKR 977
Score = 43 (20.2 bits), Expect = 8.1e-177, Sum P(3) = 8.1e-177
Identities = 15/56 (26%), Positives = 28/56 (50%)
Query: 182 VDLSPVKVFKNPEGSLSRTAALQSALTKERRE--VREQQLRTMIDSIPKDLNRPWE 235
VD S K + L + L++ TK RR+ V E+Q R ++ + +++ +E
Sbjct: 257 VDDSETKESIERKNRLEQNEQLETERTKSRRKYLVGEEQKRLIL--LKREIEEEYE 310
Score = 38 (18.4 bits), Expect = 8.1e-177, Sum P(3) = 8.1e-177
Identities = 7/25 (28%), Positives = 16/25 (64%)
Query: 81 KPKLQSKKKSGRDRKTNYKAEFEND 105
K K + KK +D+K++ + + +N+
Sbjct: 144 KKKEKKDKKDKKDKKSSTRKKSDNN 168
Score = 38 (18.4 bits), Expect = 8.1e-177, Sum P(3) = 8.1e-177
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 81 KPKLQSKKKSGRDRKTNYKAEFENDRERS 109
K K + KKK +D+K K + + R++S
Sbjct: 138 KRKKKEKKKEKKDKKDK-KDKKSSTRKKS 165
>UNIPROTKB|E1BF68 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12813 GeneTree:ENSGT00700000104241 OMA:GTLHREF
CTD:8449 EMBL:DAAA02055402 IPI:IPI00691986 RefSeq:NP_001193139.1
UniGene:Bt.22201 PRIDE:E1BF68 Ensembl:ENSBTAT00000009148
GeneID:506405 KEGG:bta:506405 NextBio:20867594 Uniprot:E1BF68
Length = 1045
Score = 1608 (571.1 bits), Expect = 1.3e-170, Sum P(3) = 1.3e-170
Identities = 307/524 (58%), Positives = 397/524 (75%)
Query: 277 RSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKG- 335
+ K SIQ RRSLP+F + EL+ A+ ++QVLI+ GETGSGKTTQ+ QYL E GYT KG
Sbjct: 391 QQKESIQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTKKGM 450
Query: 336 KIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREIL 395
KI CTQPRRVAA SVA RVA E G +LG EVGY+IRFEDCT TV++YMTDGMLLRE L
Sbjct: 451 KIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFL 510
Query: 396 IDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFN 455
+ +L+ YSV+M+DEAHERT++TD+LFGL+K + + RP+L+++V SATLD RFS +F +
Sbjct: 511 SEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSTFFDD 570
Query: 456 CNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACE 515
IF IPGR FPVDI Y++ DYL++ +++VLQIHV +P GDIL+FLTGQEEI+ ACE
Sbjct: 571 APIFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACE 630
Query: 516 SLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGI 575
L ++ + LG + EL+VLP+Y+ LPS++Q+RIF+P PPG RKVVVATNIAE SLTI+GI
Sbjct: 631 MLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGI 690
Query: 576 FYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSE 635
YV+DPGF KQ YNP+ ++SL +TP S+ASA QRAGRAGR GKC+RLYT AY+ E
Sbjct: 691 IYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHE 750
Query: 636 MSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEG 695
+ TT+PEIQR +L + L +K++GI++L+ FDF+DPP + L+ A+EQLY+LGAL+ G
Sbjct: 751 LEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLG 810
Query: 696 LLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGH-IFTRPRERQAKADE 754
LT G+KMAE P+DP LSKM+LAS CS+EILT+ AM+ + IF RP+++ AD
Sbjct: 811 ELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADN 870
Query: 755 KRARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
R FF P GDHL LL VY W +S WC ENFV RS+++
Sbjct: 871 ARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRR 914
Score = 45 (20.9 bits), Expect = 1.3e-170, Sum P(3) = 1.3e-170
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 85 QSKKKSGRDRKTNYKAEFENDRERSGR 111
+ K+K+G ++ K E E++ ER+ R
Sbjct: 147 KGKRKTGEKKEQTEKPESEDEWERTER 173
Score = 43 (20.2 bits), Expect = 1.3e-170, Sum P(3) = 1.3e-170
Identities = 9/36 (25%), Positives = 21/36 (58%)
Query: 22 ELETHLGFIDKVLAEFISESGRNSETVEIFDDKLKE 57
EL + LG ++ +A+F+ + + + E F +L++
Sbjct: 14 ELHSVLGLSERHVAQFLIGTAQRCASAEEFVQRLRD 49
>UNIPROTKB|O60231 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 EMBL:BA000025 GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813 GO:GO:0003724
HOVERGEN:HBG039428 OMA:GTLHREF EMBL:AB001601 EMBL:AB011149
EMBL:BC008825 EMBL:BC009392 IPI:IPI00552073 RefSeq:NP_001157711.1
RefSeq:NP_003578.2 UniGene:Hs.485060 ProteinModelPortal:O60231
SMR:O60231 IntAct:O60231 MINT:MINT-5003862 STRING:O60231
PhosphoSite:O60231 PaxDb:O60231 PRIDE:O60231 DNASU:8449
Ensembl:ENST00000376442 Ensembl:ENST00000383577
Ensembl:ENST00000417308 Ensembl:ENST00000421095
Ensembl:ENST00000424672 Ensembl:ENST00000451456
Ensembl:ENST00000458094 GeneID:8449 KEGG:hsa:8449 UCSC:uc003nqz.3
CTD:8449 GeneCards:GC06M030620 HGNC:HGNC:2739 HPA:HPA051455
MIM:603405 neXtProt:NX_O60231 PharmGKB:PA27205 InParanoid:O60231
OrthoDB:EOG4VHK5Q PhylomeDB:O60231 GenomeRNAi:8449 NextBio:31614
ArrayExpress:O60231 Bgee:O60231 CleanEx:HS_DHX16
Genevestigator:O60231 GermOnline:ENSG00000204560 Uniprot:O60231
Length = 1041
Score = 1606 (570.4 bits), Expect = 1.3e-170, Sum P(3) = 1.3e-170
Identities = 305/524 (58%), Positives = 397/524 (75%)
Query: 277 RSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKG- 335
+ K SIQ RRSLP+F + EL+ A+ ++QVLI+ GETGSGKTTQ+ QYL E GYT KG
Sbjct: 387 QQKESIQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGM 446
Query: 336 KIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREIL 395
KI CTQPRRVAA SVA RVA E G +LG EVGY+IRFEDCT TV++YMTDGMLLRE L
Sbjct: 447 KIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFL 506
Query: 396 IDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFN 455
+ +L+ YSV+M+DEAHERT++TD+LFGL+K + + RP+L+++V SAT+D RFS +F +
Sbjct: 507 SEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDD 566
Query: 456 CNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACE 515
+F IPGR FPVDI Y++ DYL++ +++VLQIHV +P GDIL+FLTGQEEI+ ACE
Sbjct: 567 APVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACE 626
Query: 516 SLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGI 575
L ++ + LG + EL+VLP+Y+ LPS++Q+RIF+P PPG RKVVVATNIAE SLTI+GI
Sbjct: 627 MLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGI 686
Query: 576 FYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSE 635
YV+DPGF KQ YNP+ ++SL +TP S+ASA QRAGRAGR GKC+RLYT AY+ E
Sbjct: 687 IYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHE 746
Query: 636 MSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEG 695
+ TT+PEIQR +L + L +K++GI++L+ FDF+DPP + L+ A+EQLY+LGAL+ G
Sbjct: 747 LEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLG 806
Query: 696 LLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGH-IFTRPRERQAKADE 754
LT G+KMAE P+DP LSKM+LAS CS+EILT+ AM+ + IF RP+++ AD
Sbjct: 807 ELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADN 866
Query: 755 KRARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
R FF P GDHL LL VY W +S WC ENFV RS+++
Sbjct: 867 ARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRR 910
Score = 47 (21.6 bits), Expect = 1.3e-170, Sum P(3) = 1.3e-170
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 85 QSKKKSGRDRKTNYKAEFENDRERSGR 111
+ KKK+G ++ K E E++ ER+ R
Sbjct: 143 KGKKKTGGSKQQTEKPESEDEWERTER 169
Score = 43 (20.2 bits), Expect = 1.3e-170, Sum P(3) = 1.3e-170
Identities = 9/36 (25%), Positives = 21/36 (58%)
Query: 22 ELETHLGFIDKVLAEFISESGRNSETVEIFDDKLKE 57
EL + LG ++ +A+F+ + + + E F +L++
Sbjct: 14 ELHSVLGLSERHVAQFLIGTAQRCTSAEEFVQRLRD 49
>ZFIN|ZDB-GENE-030131-8589 [details] [associations]
symbol:dhx16 "DEAH (Asp-Glu-Ala-His) box
polypeptide 16" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0035987
"endodermal cell differentiation" evidence=IMP] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-8589 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
GO:GO:0035987 EMBL:BC045393 IPI:IPI00495801 RefSeq:NP_956318.1
UniGene:Dr.76186 ProteinModelPortal:Q7ZVV8 STRING:Q7ZVV8
PRIDE:Q7ZVV8 GeneID:336645 KEGG:dre:336645 InParanoid:Q7ZVV8
NextBio:20811846 ArrayExpress:Q7ZVV8 Bgee:Q7ZVV8 Uniprot:Q7ZVV8
Length = 1054
Score = 1631 (579.2 bits), Expect = 3.0e-170, Sum P(2) = 3.0e-170
Identities = 308/525 (58%), Positives = 398/525 (75%)
Query: 276 QRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKG 335
++ K SIQE RRSLPIF + +L+ A+ D+Q+L++ GETGSGKTTQ+ QYL E GYT G
Sbjct: 399 EKQKQSIQEVRRSLPIFPYREDLLAAIGDHQILVIEGETGSGKTTQIPQYLLEEGYTKGG 458
Query: 336 -KIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREI 394
KIGCTQPRRVAA SVA RVA+E +LG EVGY+IRFEDCT T++KYMTDGMLLRE
Sbjct: 459 MKIGCTQPRRVAAMSVAARVAQEMSVKLGNEVGYSIRFEDCTSERTILKYMTDGMLLREF 518
Query: 395 LIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFF 454
L + +L+ YSVI++DEAHERT++TD+LFGL+K + + RPDL+++V SATLD ERFS +F
Sbjct: 519 LTEPDLASYSVIIIDEAHERTLHTDILFGLIKDIARFRPDLKVLVASATLDTERFSSFFD 578
Query: 455 NCNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFAC 514
+ +F IPGR FPVDI Y++ DYL++ +++VLQIHV + GD+L+FLTGQEEI+ C
Sbjct: 579 DAPVFRIPGRRFPVDIYYTKAPEADYLEACVVSVLQIHVTQSPGDVLVFLTGQEEIEACC 638
Query: 515 ESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDG 574
E L E+ + LG + EL+VLP+Y+ LPS++Q++IF P PPG RKVVVATNIAE SLTIDG
Sbjct: 639 ELLQERCRRLGSKISELLVLPIYANLPSDMQAKIFNPTPPGARKVVVATNIAETSLTIDG 698
Query: 575 IFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRS 634
I YVIDPGF KQ YN K ++SL++TP S+ASA QRAGRAGR GKC+RLYT A++
Sbjct: 699 IIYVIDPGFCKQKSYNAKTGMESLIVTPCSRASANQRAGRAGRVAAGKCFRLYTAWAFKH 758
Query: 635 EMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEE 694
EM TT+PEIQR NL + L +K++GIN+L+ FDF+DPP + L+ A+EQLY+LGAL+
Sbjct: 759 EMEETTVPEIQRTNLGNVVLLLKSLGINDLIHFDFMDPPPHETLVLALEQLYALGALNHL 818
Query: 695 GLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGH-IFTRPRERQAKAD 753
G LTKLG++MAE P+DP LSKM+LAS CS+E+LTI AM+ + IF RP+++ AD
Sbjct: 819 GELTKLGRRMAELPVDPMLSKMILASEQYKCSEEVLTIAAMLSVNNSIFYRPKDKVVHAD 878
Query: 754 EKRARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
R F P GDHL LL VY W +S WC ENF+ RS+K+
Sbjct: 879 NARMNFVVPGGDHLVLLNVYTQWVESGYSTQWCFENFIQFRSMKR 923
Score = 46 (21.3 bits), Expect = 3.0e-170, Sum P(2) = 3.0e-170
Identities = 18/75 (24%), Positives = 33/75 (44%)
Query: 19 ICSELETHLGFIDKVLAEFISESGRNSETVEIFDDKLKEYGA-DLPNYLVRTLFNVIHTI 77
+ +L LG D+ +A+F+ + S + F +L++ G D+ + T F H +
Sbjct: 8 VSDQLHDILGLSDRYVAQFMIGLVQKSSGPQDFVSRLQDTGTIDIDQRI--TAF--AHEL 63
Query: 78 LHPKPKLQSKKKSGR 92
PK +K R
Sbjct: 64 YDKAPKKHVVEKPAR 78
Score = 46 (21.3 bits), Expect = 3.0e-170, Sum P(2) = 3.0e-170
Identities = 24/98 (24%), Positives = 40/98 (40%)
Query: 32 KVLAEFISESGRNSETVEIFDDKLKEYGADLPNYLVRTLFNVIHTILHPKPKLQSKKKSG 91
K+L E +S R + +KL++ A++ + LF+ + + L+ K+
Sbjct: 223 KMLPELRKQS-RRQYLSKREQEKLEDLEAEIKDE--EYLFSTQNLTDRERKDLEYKRTI- 278
Query: 92 RDRKTNYK-AEFENDRERSGRYCKSNPPMLKDMPVSRM 128
RD YK A + ER RY K +P M
Sbjct: 279 RDMAKEYKKAGAKEQEERKNRYYMPEEKRNKSIPQKDM 316
>UNIPROTKB|Q767K6 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 EMBL:AB113357 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AB113356 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
RefSeq:NP_001116578.1 UniGene:Ssc.15273 ProteinModelPortal:Q767K6
GeneID:100144456 KEGG:ssc:100144456 Uniprot:Q767K6
Length = 1045
Score = 1607 (570.8 bits), Expect = 5.8e-170, Sum P(3) = 5.8e-170
Identities = 306/524 (58%), Positives = 397/524 (75%)
Query: 277 RSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKG- 335
+ K SIQ RRSLP+F + EL+ AV ++Q+LI+ GETGSGKTTQ+ QYL E GYT KG
Sbjct: 391 QQKESIQAVRRSLPVFPFREELLAAVANHQILIIEGETGSGKTTQIPQYLFEEGYTQKGM 450
Query: 336 KIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREIL 395
KI CTQPRRVAA SVA RVA E G +LG EVGY+IRFEDCT TV++YMTDGMLLRE L
Sbjct: 451 KIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFL 510
Query: 396 IDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFN 455
+ +L+ YSV+M+DEAHERT++TD+LFGL+K + + RP+L+++V SATLD RFS +F +
Sbjct: 511 SEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSTFFDD 570
Query: 456 CNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACE 515
+F IPGR FPVDI Y++ DYL++ +++VLQIHV +P GDIL+FLTGQEEI+ ACE
Sbjct: 571 APVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACE 630
Query: 516 SLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGI 575
L ++ + LG + EL+VLP+Y+ LPS++Q+RIF+P PPG RKVVVATNIAE SLTI+GI
Sbjct: 631 MLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGI 690
Query: 576 FYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSE 635
YV+DPGF KQ YNP+ ++SL +TP S+ASA QRAGRAGR GKC+RLYT AY+ E
Sbjct: 691 IYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHE 750
Query: 636 MSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEG 695
+ TT+PEIQR +L + L +K++GI++L+ FDF+DPP + L+ A+EQLY+LGAL+ G
Sbjct: 751 LEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLG 810
Query: 696 LLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGH-IFTRPRERQAKADE 754
LT G+KMAE P+DP LSKM+LAS CS+EILT+ AM+ + IF RP+++ AD
Sbjct: 811 ELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADN 870
Query: 755 KRARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
R FF P GDHL LL VY W +S WC ENFV RS+++
Sbjct: 871 ARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRR 914
Score = 43 (20.2 bits), Expect = 5.8e-170, Sum P(3) = 5.8e-170
Identities = 9/36 (25%), Positives = 21/36 (58%)
Query: 22 ELETHLGFIDKVLAEFISESGRNSETVEIFDDKLKE 57
EL + LG ++ +A+F+ + + + E F +L++
Sbjct: 14 ELHSVLGLSERHVAQFLIGTAQRCASAEEFVQRLRD 49
Score = 40 (19.1 bits), Expect = 5.8e-170, Sum P(3) = 5.8e-170
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 85 QSKKKSGRDRKTNYKAEFENDRERSGR 111
+ KK +G ++ K E E++ ER+ R
Sbjct: 147 KGKKTTGGNKPQTEKPESEDEWERTER 173
>UNIPROTKB|F1RU83 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:GTLHREF EMBL:CU480634
Ensembl:ENSSSCT00000001498 Uniprot:F1RU83
Length = 1045
Score = 1607 (570.8 bits), Expect = 7.4e-170, Sum P(3) = 7.4e-170
Identities = 306/524 (58%), Positives = 397/524 (75%)
Query: 277 RSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKG- 335
+ K SIQ RRSLP+F + EL+ AV ++Q+LI+ GETGSGKTTQ+ QYL E GYT KG
Sbjct: 391 QQKESIQAVRRSLPVFPFREELLAAVANHQILIIEGETGSGKTTQIPQYLFEEGYTQKGM 450
Query: 336 KIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREIL 395
KI CTQPRRVAA SVA RVA E G +LG EVGY+IRFEDCT TV++YMTDGMLLRE L
Sbjct: 451 KIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFL 510
Query: 396 IDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFN 455
+ +L+ YSV+M+DEAHERT++TD+LFGL+K + + RP+L+++V SATLD RFS +F +
Sbjct: 511 SEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSTFFDD 570
Query: 456 CNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACE 515
+F IPGR FPVDI Y++ DYL++ +++VLQIHV +P GDIL+FLTGQEEI+ ACE
Sbjct: 571 APVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACE 630
Query: 516 SLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGI 575
L ++ + LG + EL+VLP+Y+ LPS++Q+RIF+P PPG RKVVVATNIAE SLTI+GI
Sbjct: 631 MLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGI 690
Query: 576 FYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSE 635
YV+DPGF KQ YNP+ ++SL +TP S+ASA QRAGRAGR GKC+RLYT AY+ E
Sbjct: 691 IYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHE 750
Query: 636 MSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEG 695
+ TT+PEIQR +L + L +K++GI++L+ FDF+DPP + L+ A+EQLY+LGAL+ G
Sbjct: 751 LEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLG 810
Query: 696 LLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGH-IFTRPRERQAKADE 754
LT G+KMAE P+DP LSKM+LAS CS+EILT+ AM+ + IF RP+++ AD
Sbjct: 811 ELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADN 870
Query: 755 KRARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
R FF P GDHL LL VY W +S WC ENFV RS+++
Sbjct: 871 ARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRR 914
Score = 43 (20.2 bits), Expect = 7.4e-170, Sum P(3) = 7.4e-170
Identities = 9/36 (25%), Positives = 21/36 (58%)
Query: 22 ELETHLGFIDKVLAEFISESGRNSETVEIFDDKLKE 57
EL + LG ++ +A+F+ + + + E F +L++
Sbjct: 14 ELHSVLGLSERHVAQFLIGTAQRCASAEEFVQRLRD 49
Score = 39 (18.8 bits), Expect = 7.4e-170, Sum P(3) = 7.4e-170
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 85 QSKKKSGRDRKTNYKAEFENDRERSGR 111
+ KK +G + K E E++ ER+ R
Sbjct: 147 KGKKTTGGSKPQTEKPESEDEWERTER 173
>FB|FBgn0086444 [details] [associations]
symbol:l(2)37Cb "lethal (2) 37Cb" species:7227 "Drosophila
melanogaster" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12813 GO:GO:0016779 GeneTree:ENSGT00700000104241
OMA:GTLHREF EMBL:AY061330 RefSeq:NP_609946.1 UniGene:Dm.468
SMR:Q9VIZ3 IntAct:Q9VIZ3 MINT:MINT-318410 STRING:Q9VIZ3
EnsemblMetazoa:FBtr0081163 GeneID:35192 KEGG:dme:Dmel_CG10689
UCSC:CG10689-RA FlyBase:FBgn0086444 InParanoid:Q9VIZ3
OrthoDB:EOG459ZWG GenomeRNAi:35192 NextBio:792305 Uniprot:Q9VIZ3
Length = 894
Score = 1602 (569.0 bits), Expect = 2.5e-169, Sum P(3) = 2.5e-169
Identities = 304/537 (56%), Positives = 405/537 (75%)
Query: 264 KKNAYGKAFTFGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLA 323
K ++ T +R +L++ E RRSLP++ K +LI AV ++QVLI+ GETGSGKTTQ+
Sbjct: 227 KSSSRQPELTEKERKRLTLDETRRSLPVYPFKEDLIAAVKEHQVLIIEGETGSGKTTQVP 286
Query: 324 QYLAEAGYTTKGK-IGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVI 382
QYL EAG+T K IGCTQPRRVAA SVA RVAEE G +LG EVGY+IRFEDCT T++
Sbjct: 287 QYLVEAGFTKDKKMIGCTQPRRVAAMSVAARVAEEMGVKLGNEVGYSIRFEDCTSDRTIL 346
Query: 383 KYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSA 442
KYMTDG L RE L + +L+ YSV+++DEAHERT++TD+LFGL+K + + RP+L+L+++SA
Sbjct: 347 KYMTDGTLHREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIARFRPELKLLISSA 406
Query: 443 TLDAERFSGYFFNCNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILL 502
TLDAE+FS +F + IF IPGR +PVDI Y++ DY+D+ ++VLQIH +P GDIL+
Sbjct: 407 TLDAEKFSAFFDDAPIFRIPGRRYPVDIFYTKAPEADYIDACCVSVLQIHATQPLGDILV 466
Query: 503 FLTGQEEIDFACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVA 562
FLTGQ+EI+ E L +++K LG + EL+V+PVY+ LPS++Q++IFEP PP RKV++A
Sbjct: 467 FLTGQDEIETCQEVLHDRVKRLGSKIRELIVIPVYANLPSDMQAKIFEPTPPNARKVILA 526
Query: 563 TNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGK 622
TNIAE SLTID I YVIDPGFAKQN +N + ++SL++ PIS+ASA QRAGRAGRT PGK
Sbjct: 527 TNIAETSLTIDNIIYVIDPGFAKQNNFNSRTGMESLMVVPISKASANQRAGRAGRTAPGK 586
Query: 623 CYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAM 682
C+RLYT AY+ E+ T+PEIQRINL + L +KA+GIN+L+ FDF+DPP + L+ A+
Sbjct: 587 CFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLAL 646
Query: 683 EQLYSLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGH-I 741
EQLY+LGAL+ G LTKLG++MAEFP+DP + KMLLAS CS+E++TI AM+ I
Sbjct: 647 EQLYALGALNHHGELTKLGRRMAEFPVDPMMGKMLLASEKYKCSEEMVTIAAMLSVNSAI 706
Query: 742 FTRPRERQAKADEKRARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
F RP+++ AD R F GDHL+LL VY W ++S WC ENF+ RS+K+
Sbjct: 707 FYRPKDKIIHADTARKNFNHMHGDHLSLLQVYNQWAETDYSTQWCYENFIQYRSMKR 763
Score = 42 (19.8 bits), Expect = 2.5e-169, Sum P(3) = 2.5e-169
Identities = 24/90 (26%), Positives = 37/90 (41%)
Query: 204 QSALTKERREVRE--QQLRTMIDSIPK--DLNRPWEDPMPET---GERHLAQELRGVGLS 256
+S LTK +E RE +QL + K +L R MP+ GER E+
Sbjct: 115 ESVLTKREKEEREYKKQLLNIAKEHEKARELERIQRYNMPQDLKKGERSEYVEVDEFEKQ 174
Query: 257 AR-DMPEWKKNAYGKA-FTFGQRSKLSIQE 284
+ +W+ A F FG + + +E
Sbjct: 175 PNSEQKKWEAEQLASARFHFGAKDAKAEEE 204
Score = 40 (19.1 bits), Expect = 2.5e-169, Sum P(3) = 2.5e-169
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 80 PKPKLQSKKKSGRDRKTNYKAEFEND 105
P +LQS+++ RK + AE E D
Sbjct: 80 PHLRLQSRRQYLEKRKDDKVAELEAD 105
>DICTYBASE|DDB_G0285843 [details] [associations]
symbol:helD "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 dictyBase:DDB_G0285843 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0005681 GO:GO:0003676
EMBL:AAFI02000082 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
KO:K12815 RefSeq:XP_638016.1 EnsemblProtists:DDB0191460
GeneID:8625367 KEGG:ddi:DDB_G0285843 InParanoid:Q54MH4
ProtClustDB:CLSZ2846702 Uniprot:Q54MH4
Length = 1387
Score = 1624 (576.7 bits), Expect = 5.5e-169, Sum P(2) = 5.5e-169
Identities = 321/645 (49%), Positives = 451/645 (69%)
Query: 171 PAFLQGQTRVSVDLSPVKVFKNPEGSLSRTAALQSALTKERREVREQ-QLRTMI-----D 224
P FL G ++ V+ K+P ++ + SAL KE RE R++ + + +
Sbjct: 525 PPFLDGHQVLTKQQRAVQTVKDPTSDMAVISRKGSALMKEFREKRDRIKSQKKVWELGGT 584
Query: 225 SIPKDLNRPWEDPMPET--------GERHLAQELRGVGLSARDMPEWKKNAYGKAFTFGQ 276
+I K + ED + G + +E G L+ + ++ + T G
Sbjct: 585 AIGKIMGIKSEDEKEKEQQLANGGGGGEQIDKET-GEVLNYKAQSQFASHLTPNKPTEGS 643
Query: 277 R--SKL-SIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTT 333
SK +I+EQR LPIF +N+L++ + +N V+I++GETGSGKTTQL QYL E GY+
Sbjct: 644 SEFSKTKTIKEQREFLPIFGCRNDLMKIIRENNVIIIVGETGSGKTTQLVQYLYEDGYSK 703
Query: 334 KGKIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLRE 393
GKIGCTQPRRVAA SVAKRV+EE LG EVGY+IRFEDCT +T IKYMTDG+LLRE
Sbjct: 704 FGKIGCTQPRRVAAVSVAKRVSEEMSVTLGNEVGYSIRFEDCTSNETAIKYMTDGILLRE 763
Query: 394 ILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYF 453
D NL +YS I++DEAHER++NTDVLFG+LK+++ RR D++LIVTSAT+D+++FS +F
Sbjct: 764 SFNDPNLDKYSAIIMDEAHERSLNTDVLFGILKKVMSRRYDMKLIVTSATMDSKKFSMFF 823
Query: 454 FNCNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFA 513
+ +F+IPGRTFPVD+ +S+ DY+DSA+ +L IHV + GDIL+F+TGQE+I+
Sbjct: 824 GDVPVFTIPGRTFPVDVLWSKTPCEDYVDSAVKQILSIHVTQGVGDILVFMTGQEDIETT 883
Query: 514 CESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTID 573
C ++ E+IK LG P L +LP+YS LPS++Q++IFE A G RK ++ATNIAE SLT+D
Sbjct: 884 CATVEERIKQLGPQAPPLTLLPIYSQLPSDMQAKIFEKADNGSRKCIIATNIAETSLTVD 943
Query: 574 GIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYR 633
GI YVID G+ K VYNP+ +DSL +TPIS+A+A QR+GRAGRTGPG+CYRLYTESA++
Sbjct: 944 GILYVIDTGYCKLKVYNPRVGMDSLQVTPISKANANQRSGRAGRTGPGRCYRLYTESAFK 1003
Query: 634 SEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDE 693
E+ IPEIQR NL + L +K+MG+ NLL FDF+DPP ++++M QL+ LGALD+
Sbjct: 1004 YELMDNNIPEIQRTNLGNVVLNLKSMGVKNLLDFDFMDPPPQDNILNSMYQLWVLGALDD 1063
Query: 694 EGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKAD 753
+G +T LGK+M+EFPLDPPLSKM++ + LGC +I+TI++M+ +F RP+ + ++D
Sbjct: 1064 QGQITPLGKRMSEFPLDPPLSKMVIVAEQLGCGQDIVTIVSMLSMPSVFYRPKGAEEESD 1123
Query: 754 EKRARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
R +FF PE DHLTLL VY+ WK N+S WC E++++ ++++K
Sbjct: 1124 ASREKFFVPESDHLTLLHVYQQWKINNYSSQWCAEHYIHIKAMRK 1168
Score = 41 (19.5 bits), Expect = 5.5e-169, Sum P(2) = 5.5e-169
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 190 FKNPEGSLSRTAALQSALTKERREVREQQLRT-MIDSIPKD 229
FK P+ + ++ L KE+RE +E++ R ++D D
Sbjct: 126 FKIPQ--VKKSVLGLDILAKEKREEQEEKRRKELLDRFNND 164
>TAIR|locus:2033723 [details] [associations]
symbol:ESP3 "ENHANCED SILENCING PHENOTYPE 3" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] [GO:0008380 "RNA splicing" evidence=NAS]
[GO:0035194 "posttranscriptional gene silencing by RNA"
evidence=IMP] [GO:0016020 "membrane" evidence=IDA] [GO:0006306 "DNA
methylation" evidence=RCA] [GO:0006342 "chromatin silencing"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0010267 "production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0008380 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 GO:GO:0035194 OMA:GTLHREF EMBL:AY074318 EMBL:AY133872
IPI:IPI00543041 RefSeq:NP_174527.2 UniGene:At.40132
ProteinModelPortal:Q8VY00 IntAct:Q8VY00 PaxDb:Q8VY00 PRIDE:Q8VY00
EnsemblPlants:AT1G32490.1 GeneID:840143 KEGG:ath:AT1G32490
TAIR:At1g32490 InParanoid:Q8VY00 PhylomeDB:Q8VY00
ProtClustDB:CLSN2685836 ArrayExpress:Q8VY00 Genevestigator:Q8VY00
Uniprot:Q8VY00
Length = 1044
Score = 1643 (583.4 bits), Expect = 5.8e-169, P = 5.8e-169
Identities = 305/536 (56%), Positives = 414/536 (77%)
Query: 266 NAYGKAFTFGQRSKLS-IQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQ 324
+A K+ +++ L +QE RRSLPI+ +++L++AV ++QVL+++G+TGSGKTTQ+ Q
Sbjct: 380 DAKQKSQDLAEKTALEELQEVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQ 439
Query: 325 YLAEAGYTTKGKIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKY 384
YL EAGYT +GK+GCTQPRRVAA SVA RVA+E G +LG EVGY+IRFEDCT TV+KY
Sbjct: 440 YLHEAGYTKRGKVGCTQPRRVAAMSVAARVAQEMGVKLGHEVGYSIRFEDCTSDKTVLKY 499
Query: 385 MTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATL 444
MTDGMLLRE+L + +L+ YSV+++DEAHERT++TD+LFGL+K + + RPDL+L+++SAT+
Sbjct: 500 MTDGMLLRELLGEPDLASYSVVIVDEAHERTLSTDILFGLVKDIARFRPDLKLLISSATM 559
Query: 445 DAERFSGYFFNCNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFL 504
DAE+FS YF IFS PGR +PV+INY+ DY+D+A++T+L IHV EP GDIL+F
Sbjct: 560 DAEKFSDYFDTAPIFSFPGRRYPVEINYTSAPEADYMDAAIVTILTIHVREPLGDILVFF 619
Query: 505 TGQEEIDFACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATN 564
TGQEEI+ A E L +I+ LG + EL++ P+Y+ LPSE+Q++IFEP P G RKVV+ATN
Sbjct: 620 TGQEEIETAEEILKHRIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATN 679
Query: 565 IAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCY 624
IAE SLTIDGI YV+DPGF+K YNP+ ++SL+ITPIS+ASA QRAGRAGRT PGKCY
Sbjct: 680 IAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLITPISKASATQRAGRAGRTSPGKCY 739
Query: 625 RLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQ 684
RLYT Y +++ T+PE+QR NL L +K++GI++L++FDF+DPP +AL+ ++E
Sbjct: 740 RLYTAFNYNNDLEENTVPEVQRTNLASVVLALKSLGIHDLINFDFMDPPPAEALVKSLEL 799
Query: 685 LYSLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTG-HIFT 743
L++LGAL++ G LTK G++MAEFPLDP LSKM++ S CSDEI++I AM+ G IF
Sbjct: 800 LFALGALNKLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGGSIFY 859
Query: 744 RPRERQAKADEKRARFFQPE-GDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
RP+++Q AD R F GDH+ LL VY +WK NFS WC EN++ RS+K+
Sbjct: 860 RPKDKQVHADNARMNFHTGNVGDHIALLKVYSSWKETNFSTQWCYENYIQVRSMKR 915
>ASPGD|ASPL0000014477 [details] [associations]
symbol:AN4032 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:BN001302
EMBL:AACD01000065 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12815 OMA:PSRSTWE OrthoDB:EOG4GQTD2
RefSeq:XP_661636.1 EnsemblFungi:CADANIAT00004650 GeneID:2873454
KEGG:ani:AN4032.2 Uniprot:Q5B5Z8
Length = 924
Score = 1638 (581.7 bits), Expect = 2.0e-168, P = 2.0e-168
Identities = 324/635 (51%), Positives = 456/635 (71%)
Query: 170 QPAFLQGQTRVSVDLSPVKVFKNPEGSLSRTAALQSALTKERREVREQQLR-----TMID 224
+P FL G+T + L PV ++P+ ++ + S + ++RR+ RE+Q + T+
Sbjct: 69 RPPFLDGRTIFTKQLEPVSAVRDPQSDMAVFSRKGSRVVRDRRQQRERQKQAQEATTVAG 128
Query: 225 SIPKDLNRPWEDPMPETGERHLAQELRGVGLSARDMPEWKKNAYGKAFTFGQRSKLSIQE 284
+ +L ED + + +G A M KK G +F +SK +++E
Sbjct: 129 TALGNLMGVKEDEGDTAVAMPVEEVYKGGNKFAHHM---KKQDEGGQSSFS-KSK-TLRE 183
Query: 285 QRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCTQPRR 344
QR LP F ++ +L++ + DNQV++++GETGSGKTTQL Q+L E GY G IGCTQPRR
Sbjct: 184 QREFLPAFAVREDLLRVIRDNQVVVVVGETGSGKTTQLTQFLYEDGYAKFGMIGCTQPRR 243
Query: 345 VAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYS 404
VAA SVAKRV+EE LG+ VGYAIRFEDCTGP+T IKYMTDG+LLRE L+ +L +YS
Sbjct: 244 VAAMSVAKRVSEEMEVDLGDLVGYAIRFEDCTGPNTAIKYMTDGVLLRESLVQTDLDKYS 303
Query: 405 VIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGR 464
I++DEAHER +NTDVL GLLK+++ RR DL+LIVTSAT++AERFS +F F IPGR
Sbjct: 304 CIIMDEAHERALNTDVLMGLLKKILARRRDLKLIVTSATMNAERFSRFFGGAPEFIIPGR 363
Query: 465 TFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEKIKAL 524
TFPVD+++SR DY+DSA+ VL IHV + GDIL+F+TGQE+I+ CE + E++K L
Sbjct: 364 TFPVDVHFSRTPCEDYVDSAVKQVLAIHVSQGPGDILVFMTGQEDIEATCELVDERLKLL 423
Query: 525 GKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFA 584
D P+L +LP+YS +P+E Q++IFE A PG RKV+VATNIAE SLT+DGI +V+D G++
Sbjct: 424 N-DPPKLSILPIYSQMPAEQQAKIFERAAPGVRKVIVATNIAETSLTVDGIMFVVDSGYS 482
Query: 585 KQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEI 644
K VYNPK +D+L ITPISQA+A QR+GRAGRTGPGK YRLYTE AY++EM TIPEI
Sbjct: 483 KLKVYNPKMGMDTLQITPISQANANQRSGRAGRTGPGKAYRLYTEVAYKNEMYLQTIPEI 542
Query: 645 QRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKM 704
QR +L +T L +K++G+ +LL FDF+DPP + + +++ +L+SLGALD G LT LG++M
Sbjct: 543 QRTSLSNTVLLLKSLGVKDLLDFDFMDPPPQETISTSLFELWSLGALDNLGDLTHLGRQM 602
Query: 705 AEFPLDPPLSKMLLASVD-LGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQPE 763
FP+DPPL+K+++ + + GCS+E+LTI++M+ ++F RP+ERQ ++D R +FF PE
Sbjct: 603 TPFPMDPPLAKLIITAAEQYGCSEEMLTIVSMLSVPNVFYRPKERQEESDAAREKFFVPE 662
Query: 764 GDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
DHLTLL VY WK+ +S WC ++F+++++L++
Sbjct: 663 SDHLTLLHVYTQWKSNGYSDHWCTKHFLHAKTLRR 697
>UNIPROTKB|F1PGL2 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
GeneTree:ENSGT00700000104241 OMA:GTLHREF CTD:8449 EMBL:AAEX03008197
RefSeq:XP_538827.2 Ensembl:ENSCAFT00000000685 GeneID:481706
KEGG:cfa:481706 Uniprot:F1PGL2
Length = 1042
Score = 1611 (572.2 bits), Expect = 3.8e-168, Sum P(2) = 3.8e-168
Identities = 306/524 (58%), Positives = 397/524 (75%)
Query: 277 RSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKG- 335
+ K S+Q RRSLP+F + EL+ A+ D+QVLI+ GETGSGKTTQ+ QYL E GYT KG
Sbjct: 388 QQKESVQAVRRSLPVFPFREELLAAIADHQVLIIEGETGSGKTTQIPQYLFEEGYTKKGM 447
Query: 336 KIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREIL 395
KI CTQPRRVAA SVA RVA E G +LG EVGY+IRFEDCT TV++YMTDGMLLRE L
Sbjct: 448 KIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFL 507
Query: 396 IDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFN 455
+ +L+ YSV+M+DEAHERT++TD+LFGL+K + + RP+L+++V SATLD RFS +F +
Sbjct: 508 SEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSTFFDD 567
Query: 456 CNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACE 515
+F IPGR FPVDI Y++ DYL++ +++VLQIHV +P GDIL+FLTGQEEI+ ACE
Sbjct: 568 APVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACE 627
Query: 516 SLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGI 575
L ++ + LG + EL+VLP+Y+ LPS++Q+RIF+P PPG RKVVVATNIAE SLTI+GI
Sbjct: 628 MLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGI 687
Query: 576 FYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSE 635
YV+DPGF KQ YNP+ ++SL +TP S+ASA QRAGRAGR GKC+RLYT AY+ E
Sbjct: 688 IYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHE 747
Query: 636 MSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEG 695
+ TT+PEIQR +L + L +K++GI++L+ FDF+DPP + L+ A+EQLY+LGAL+ G
Sbjct: 748 LEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLG 807
Query: 696 LLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGH-IFTRPRERQAKADE 754
LT G+KMAE P+DP LSKM+LAS CS+EILT+ AM+ + IF RP+++ AD
Sbjct: 808 ELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADN 867
Query: 755 KRARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
R FF P GDHL LL VY W +S WC ENFV RS+++
Sbjct: 868 ARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRR 911
Score = 46 (21.3 bits), Expect = 3.8e-168, Sum P(2) = 3.8e-168
Identities = 21/95 (22%), Positives = 46/95 (48%)
Query: 22 ELETHLGFIDKVLAEFISESGRNSETVEIFDDKLKEYGA-DL--P--NYLVRTLFNVIHT 76
EL + LG ++ +A+F+ + + + E F +L++ DL P ++ +R V
Sbjct: 14 ELHSVLGLSERHVAQFLIGTAQRCASAEDFVQRLRDTDTLDLSGPARDFALRLWTKVPRK 73
Query: 77 ILHPKPKLQSKKKSGR--DRKTNYKAEFENDRERS 109
+ KP +++++ ++ +YK E+ E S
Sbjct: 74 AVVEKPARAAEREAQALLEKNRSYKL-LEDSEESS 107
>RGD|1302963 [details] [associations]
symbol:Dhx16 "DEAH (Asp-Glu-Ala-His) box polypeptide 16"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1302963 GO:GO:0005524 GO:GO:0003676 EMBL:BX883048
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
HOVERGEN:HBG039428 CTD:8449 EMBL:CH474118 IPI:IPI00421973
RefSeq:NP_997661.1 UniGene:Rn.6832 GeneID:294232 KEGG:rno:294232
UCSC:RGD:1302963 NextBio:637799 Genevestigator:Q6MG13
Uniprot:Q6MG13
Length = 1044
Score = 1609 (571.5 bits), Expect = 1.3e-167, Sum P(2) = 1.3e-167
Identities = 306/524 (58%), Positives = 397/524 (75%)
Query: 277 RSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKG- 335
+ K SIQ RRSLP+F + EL+ A+ ++QVLI+ GETGSGKTTQ+ QYL E GYT KG
Sbjct: 390 QQKESIQAVRRSLPVFPFREELLTAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTKKGM 449
Query: 336 KIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREIL 395
KI CTQPRRVAA SVA RVA E G +LG EVGY+IRFEDCT TV++YMTDGMLLRE L
Sbjct: 450 KIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFL 509
Query: 396 IDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFN 455
+ +L+ YSV+M+DEAHERT++TD+LFGL+K + + RP+L+++V SATLD RFS +F +
Sbjct: 510 SEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSAFFDD 569
Query: 456 CNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACE 515
+F IPGR FPVDI Y++ DYL++ +++VLQIHV +P GDIL+FLTGQEEI+ ACE
Sbjct: 570 APVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACE 629
Query: 516 SLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGI 575
L ++ + LG + EL+VLP+Y+ LPS++Q+RIF+P PPG RKVVVATNIAE SLTI+GI
Sbjct: 630 MLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGI 689
Query: 576 FYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSE 635
YV+DPGF KQ YNP+ ++SL +TP S+ASA QRAGRAGR GKC+RLYT AY+ E
Sbjct: 690 IYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHE 749
Query: 636 MSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEG 695
+ TT+PEIQR +L + L +K++GI++L+ FDF+DPP + L+ A+EQLY+LGAL+ G
Sbjct: 750 LEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLG 809
Query: 696 LLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGH-IFTRPRERQAKADE 754
LT G+KMAE P+DP LSKM+LAS CS+EILT+ AM+ + IF RP+++ AD
Sbjct: 810 ELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADN 869
Query: 755 KRARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
R FF P GDHL LL VY W +S WC ENFV RS+++
Sbjct: 870 ARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRR 913
Score = 43 (20.2 bits), Expect = 1.3e-167, Sum P(2) = 1.3e-167
Identities = 9/36 (25%), Positives = 21/36 (58%)
Query: 22 ELETHLGFIDKVLAEFISESGRNSETVEIFDDKLKE 57
EL + LG ++ +A+F+ + + + E F +L++
Sbjct: 14 ELHSVLGLSERHVAQFLIGTAQRCASAEEFVQRLRD 49
>ASPGD|ASPL0000006947 [details] [associations]
symbol:AN5827 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:BN001301 EMBL:AACD01000100 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813
OMA:RIDDHRD OrthoDB:EOG4SBJ63 RefSeq:XP_663431.1
ProteinModelPortal:Q5B0V3 EnsemblFungi:CADANIAT00007219
GeneID:2871194 KEGG:ani:AN5827.2 Uniprot:Q5B0V3
Length = 1128
Score = 1602 (569.0 bits), Expect = 2.7e-167, Sum P(2) = 2.7e-167
Identities = 301/521 (57%), Positives = 404/521 (77%)
Query: 281 SIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKG-KIGC 339
+I++ R+ LPI++ ++++IQAVHD+QVLI++GETGSGKTTQL QYL EAGYT G K+GC
Sbjct: 473 TIEDTRKKLPIYQFRDQIIQAVHDHQVLIIVGETGSGKTTQLPQYLHEAGYTKNGMKVGC 532
Query: 340 TQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDEN 399
TQPRRVAA SVA RVAEE G +LG EVGY+IRFED T TV+KYMTDGMLLRE+L + +
Sbjct: 533 TQPRRVAAMSVAARVAEEMGVKLGNEVGYSIRFEDNTSDKTVLKYMTDGMLLRELLTEPD 592
Query: 400 LSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIF 459
L QYS +M+DEAHERT+ TD+ GLLK + K RPDL+L+++SAT+DA++F YF N IF
Sbjct: 593 LGQYSALMIDEAHERTVPTDIACGLLKDIAKARPDLKLLISSATMDAQKFQSYFDNAPIF 652
Query: 460 SIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCE 519
+IPGR + VDI+Y++Q +YL +A+ TV QIHV + GDIL+FLTGQEEI+ A +SL E
Sbjct: 653 NIPGRMYNVDIHYTQQPEANYLAAAITTVFQIHVSQGPGDILVFLTGQEEIEAAEQSLQE 712
Query: 520 KIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVI 579
+ LG +PE+++ P+Y+ LPS++Q++IFEP PP RKVV+ATNIAE SLTIDGI YVI
Sbjct: 713 TARKLGNKIPEMIICPIYANLPSDLQAKIFEPTPPKARKVVLATNIAETSLTIDGIVYVI 772
Query: 580 DPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPT 639
DPGF K+NV+NP+ ++SLV+TP S+ASA QRAGRAGR GPGKC+RLYT+ AY +E+ +
Sbjct: 773 DPGFVKENVFNPRTGMESLVVTPCSRASANQRAGRAGRVGPGKCFRLYTKWAYYNELEES 832
Query: 640 TIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLTK 699
T PEIQR NL L +K++GI+ LL FDF+DPP + +I A+EQLY+LGAL++ G LTK
Sbjct: 833 TTPEIQRTNLSSVILMLKSLGIDQLLEFDFMDPPPAETIIRALEQLYALGALNDRGELTK 892
Query: 700 LGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMI-QTGHIFTRPRERQAKADEKRAR 758
+G++MAEFP DP L+K +LA+ GC +E+L+I++M+ + +F RP++++ AD R R
Sbjct: 893 IGRQMAEFPTDPMLAKAILAADKHGCVEEVLSIVSMLGEASALFFRPKDKKIHADSARNR 952
Query: 759 FFQPEG-DHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
F +G DHLTLL ++ W +FS W ENF+ RSL +
Sbjct: 953 FTVKDGGDHLTLLNIWNQWVDSDFSYVWAKENFLQQRSLTR 993
Score = 47 (21.6 bits), Expect = 2.7e-167, Sum P(2) = 2.7e-167
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 86 SKKKSGR-DRKTNYKAEFENDRER 108
SK S R D+ N K E EN R+R
Sbjct: 144 SKSHSDRWDKNENRKRERENSRDR 167
Score = 38 (18.4 bits), Expect = 2.4e-166, Sum P(2) = 2.4e-166
Identities = 13/49 (26%), Positives = 22/49 (44%)
Query: 8 RELTYLSLLSKICSELETHLGFIDKVLAEFISESGRNSETVEIFDDKLK 56
RE L+LL + +E L + E RN E + I +++L+
Sbjct: 305 RETERLALLRRQVAEETQELRENPNLTRREKEEFARNREVLRIAEERLR 353
>WB|WBGene00003392 [details] [associations]
symbol:mog-4 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0018996
"molting cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0048589
"developmental growth" evidence=IMP] [GO:0010172 "embryonic body
morphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001482 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0002119 GO:GO:0008380 GO:GO:0006810 GO:GO:0018996
GO:GO:0006397 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0048589 GO:GO:0010172 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12813 EMBL:AF286900 EMBL:Z81462
EMBL:Z81457 PIR:T18832 RefSeq:NP_497027.1 UniGene:Cel.17139
ProteinModelPortal:O45244 SMR:O45244 DIP:DIP-24771N IntAct:O45244
MINT:MINT-1105817 STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6
GeneID:175117 KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117
WormBase:C04H5.6 GeneTree:ENSGT00700000104241 InParanoid:O45244
OMA:GTLHREF NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 1587 (563.7 bits), Expect = 2.2e-165, Sum P(2) = 2.2e-165
Identities = 301/529 (56%), Positives = 406/529 (76%)
Query: 273 TFGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYT 332
T ++ K+SI+E R+SLP++ ++ I+AV ++QVLI+ GETGSGKTTQL QYL EAG+
Sbjct: 348 TEAEKKKMSIEETRKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFC 407
Query: 333 TKGK-IGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLL 391
GK IGCTQPRRVAA SVA RVA+E GC+LG +VGY+IRFEDCT TV+KYMTDGMLL
Sbjct: 408 EGGKRIGCTQPRRVAAMSVAARVADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLL 467
Query: 392 REILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSG 451
RE L + +L+ YSV+M+DEAHERT++TD+LFGL+K + + R DL+L+++SATLDAE+FS
Sbjct: 468 REFLNEPDLASYSVMMIDEAHERTLHTDILFGLVKDIARFRKDLKLLISSATLDAEKFSS 527
Query: 452 YFFNCNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEP-EGDILLFLTGQEEI 510
+F + IF IPGR FPVDI Y++ DY+D+A++T++QIH+ +P GDIL+FLTGQEEI
Sbjct: 528 FFDDAPIFRIPGRRFPVDIYYTQAPEADYVDAAIVTIMQIHLTQPLPGDILVFLTGQEEI 587
Query: 511 DFACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASL 570
+ E+L E+ KALG + EL+ LPVY+ LPS++Q++IFEP P RKVV+ATNIAE S+
Sbjct: 588 ETVQEALMERSKALGSKIKELIPLPVYANLPSDLQAKIFEPTPKDARKVVLATNIAETSV 647
Query: 571 TIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTES 630
TIDGI YVIDPGF+KQN ++ + ++ L + IS+A+A QRAGRAGRTGPGKC+RLYT
Sbjct: 648 TIDGINYVIDPGFSKQNSFDARSGVEHLHVVTISKAAANQRAGRAGRTGPGKCFRLYTAW 707
Query: 631 AYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGA 690
AY+ E+ IPEIQR NL + L +K++GI++L+ FDF+DPP + L+ A+EQLY+LGA
Sbjct: 708 AYKHELEEQPIPEIQRTNLGNVVLMLKSLGIHDLVHFDFLDPPPQETLVIALEQLYALGA 767
Query: 691 LDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQ-TGHIFTRPRERQ 749
L+ G LTKLG++MAEFP DP +SKM++AS CS+EI+TI AM+ +F RP+ +
Sbjct: 768 LNHRGELTKLGRRMAEFPCDPCMSKMIIASEKYECSEEIVTIAAMLSCNAAVFYRPKAQV 827
Query: 750 AKADEKRARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
AD R F+ P GDH+TL+ VY W+ +FS WC EN+V R++K+
Sbjct: 828 IHADSARKGFWSPAGDHITLMNVYNKWQESSFSQRWCVENYVQHRTMKR 876
Score = 44 (20.5 bits), Expect = 2.2e-165, Sum P(2) = 2.2e-165
Identities = 10/51 (19%), Positives = 27/51 (52%)
Query: 13 LSLLSKICSELETHLGFIDKVLAEFISESGRNSETVEIFDDKLKEYGADLP 63
+S+ I +L + +G D+ + +++ + +++ +KL++ G D P
Sbjct: 1 MSVEQFINDQLHSIVGISDRSICQYVHALAKKAKSAPDLVEKLRDAG-DFP 50
>UNIPROTKB|O45244 [details] [associations]
symbol:mog-4 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-4" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001482 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0002119
GO:GO:0008380 GO:GO:0006810 GO:GO:0018996 GO:GO:0006397
GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
GO:GO:0048589 GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 EMBL:AF286900 EMBL:Z81462 EMBL:Z81457 PIR:T18832
RefSeq:NP_497027.1 UniGene:Cel.17139 ProteinModelPortal:O45244
SMR:O45244 DIP:DIP-24771N IntAct:O45244 MINT:MINT-1105817
STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6 GeneID:175117
KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117 WormBase:C04H5.6
GeneTree:ENSGT00700000104241 InParanoid:O45244 OMA:GTLHREF
NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 1587 (563.7 bits), Expect = 2.2e-165, Sum P(2) = 2.2e-165
Identities = 301/529 (56%), Positives = 406/529 (76%)
Query: 273 TFGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYT 332
T ++ K+SI+E R+SLP++ ++ I+AV ++QVLI+ GETGSGKTTQL QYL EAG+
Sbjct: 348 TEAEKKKMSIEETRKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFC 407
Query: 333 TKGK-IGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLL 391
GK IGCTQPRRVAA SVA RVA+E GC+LG +VGY+IRFEDCT TV+KYMTDGMLL
Sbjct: 408 EGGKRIGCTQPRRVAAMSVAARVADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLL 467
Query: 392 REILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSG 451
RE L + +L+ YSV+M+DEAHERT++TD+LFGL+K + + R DL+L+++SATLDAE+FS
Sbjct: 468 REFLNEPDLASYSVMMIDEAHERTLHTDILFGLVKDIARFRKDLKLLISSATLDAEKFSS 527
Query: 452 YFFNCNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEP-EGDILLFLTGQEEI 510
+F + IF IPGR FPVDI Y++ DY+D+A++T++QIH+ +P GDIL+FLTGQEEI
Sbjct: 528 FFDDAPIFRIPGRRFPVDIYYTQAPEADYVDAAIVTIMQIHLTQPLPGDILVFLTGQEEI 587
Query: 511 DFACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASL 570
+ E+L E+ KALG + EL+ LPVY+ LPS++Q++IFEP P RKVV+ATNIAE S+
Sbjct: 588 ETVQEALMERSKALGSKIKELIPLPVYANLPSDLQAKIFEPTPKDARKVVLATNIAETSV 647
Query: 571 TIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTES 630
TIDGI YVIDPGF+KQN ++ + ++ L + IS+A+A QRAGRAGRTGPGKC+RLYT
Sbjct: 648 TIDGINYVIDPGFSKQNSFDARSGVEHLHVVTISKAAANQRAGRAGRTGPGKCFRLYTAW 707
Query: 631 AYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGA 690
AY+ E+ IPEIQR NL + L +K++GI++L+ FDF+DPP + L+ A+EQLY+LGA
Sbjct: 708 AYKHELEEQPIPEIQRTNLGNVVLMLKSLGIHDLVHFDFLDPPPQETLVIALEQLYALGA 767
Query: 691 LDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQ-TGHIFTRPRERQ 749
L+ G LTKLG++MAEFP DP +SKM++AS CS+EI+TI AM+ +F RP+ +
Sbjct: 768 LNHRGELTKLGRRMAEFPCDPCMSKMIIASEKYECSEEIVTIAAMLSCNAAVFYRPKAQV 827
Query: 750 AKADEKRARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
AD R F+ P GDH+TL+ VY W+ +FS WC EN+V R++K+
Sbjct: 828 IHADSARKGFWSPAGDHITLMNVYNKWQESSFSQRWCVENYVQHRTMKR 876
Score = 44 (20.5 bits), Expect = 2.2e-165, Sum P(2) = 2.2e-165
Identities = 10/51 (19%), Positives = 27/51 (52%)
Query: 13 LSLLSKICSELETHLGFIDKVLAEFISESGRNSETVEIFDDKLKEYGADLP 63
+S+ I +L + +G D+ + +++ + +++ +KL++ G D P
Sbjct: 1 MSVEQFINDQLHSIVGISDRSICQYVHALAKKAKSAPDLVEKLRDAG-DFP 50
>POMBASE|SPBC19C2.01 [details] [associations]
symbol:cdc28 "ATP-dependent RNA helicase Cdc28"
species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=TAS] [GO:0005524 "ATP binding"
evidence=IC] [GO:0005681 "spliceosomal complex" evidence=IC]
[GO:0005682 "U5 snRNP" evidence=ISO] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPBC19C2.01
GO:GO:0005524 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0005682 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0046540 GO:GO:0004004 EMBL:U48733 PIR:T46568 PIR:T50372
RefSeq:NP_595686.2 ProteinModelPortal:Q10752 STRING:Q10752
EnsemblFungi:SPBC19C2.01.1 GeneID:2540707 KEGG:spo:SPBC19C2.01
HOGENOM:HOG000175261 KO:K12813 OMA:RIDDHRD OrthoDB:EOG4SBJ63
NextBio:20801829 GO:GO:0045292 Uniprot:Q10752
Length = 1055
Score = 1563 (555.3 bits), Expect = 3.2e-165, Sum P(3) = 3.2e-165
Identities = 290/519 (55%), Positives = 400/519 (77%)
Query: 281 SIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKG--KIG 338
S++ R+SLP+++ K++L++A+++ QVL+++ ETGSGKTTQL Q+L EAGYT KG KI
Sbjct: 410 SLESSRKSLPVYQYKDDLLKAINEYQVLLIVAETGSGKTTQLPQFLHEAGYT-KGNKKIC 468
Query: 339 CTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDE 398
CTQPRRVAA SVA RVA+E RLG+EVGY+IRFE+ T TVIKY+TDGMLLRE L +
Sbjct: 469 CTQPRRVAAMSVAARVAKEMDVRLGQEVGYSIRFENATSEKTVIKYLTDGMLLREFLTEP 528
Query: 399 NLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNI 458
+L+ YSVI++DEAHERT++TD+LFGL+K + + RPDL+++++SAT+DAE+FS YF +
Sbjct: 529 DLASYSVIIIDEAHERTLHTDILFGLVKDIARFRPDLKVLISSATIDAEKFSAYFDEAPV 588
Query: 459 FSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLC 518
F +PGR +PVDI Y+ Q +Y+ +A+ T+LQIH +P GDIL+FLTGQ+EI+ E++
Sbjct: 589 FYVPGRRYPVDIYYTPQPEANYIQAAITTILQIHTTQPAGDILVFLTGQDEIELMSENMQ 648
Query: 519 EKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYV 578
E + LGK +PE+++ P+Y+ LPSE+Q++IF+P PPG RKVV+ATNIAE S+TIDG+ +V
Sbjct: 649 ELCRILGKRIPEIILCPIYANLPSELQAKIFDPTPPGARKVVLATNIAETSITIDGVNFV 708
Query: 579 IDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSP 638
ID GF KQN+YNP+ ++SLV P S+ASA QRAGRAGR GPGKC+RLYT Y +E+
Sbjct: 709 IDSGFVKQNMYNPRTGMESLVSVPCSRASADQRAGRAGRVGPGKCFRLYTRRTYNNELDM 768
Query: 639 TTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLT 698
T PEIQR NL + L +K++GINNLL FDF+D P P+ L+ ++E LY+LGAL+ G LT
Sbjct: 769 VTSPEIQRTNLTNIVLLLKSLGINNLLDFDFMDAPPPETLMRSLELLYALGALNNRGELT 828
Query: 699 KLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMI-QTGHIFTRPRERQAKADEKRA 757
KLG++MAEFP DP LSK L+AS GC +E+L+I++M+ + +F RP+++ +AD+ RA
Sbjct: 829 KLGRQMAEFPTDPMLSKSLIASSKYGCVEEVLSIVSMLGEASSLFYRPKDKIMEADKARA 888
Query: 758 RFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSL 796
F QP GDHLTLL ++ W +FS W ENF+ +SL
Sbjct: 889 NFTQPGGDHLTLLHIWNEWVDTDFSYNWARENFLQYKSL 927
Score = 44 (20.5 bits), Expect = 3.2e-165, Sum P(3) = 3.2e-165
Identities = 20/98 (20%), Positives = 40/98 (40%)
Query: 13 LSLLSKICSELETHLGFIDKVLAEFISESGRNSETVEIFDDKLKEYGADLPNYLVRTLFN 72
+SL + + + LG + + E++ + S + KL +G D + V+
Sbjct: 1 MSLEQYVSDKAISLLGMSEPSVVEYLIAEAKGSSSSNNLYQKLVSFGMDGDDPAVKEF-- 58
Query: 73 VIHTILHPKPKLQSKKKSGRD-RKTNYKAEFENDRERS 109
HT+ P+ S+ K + RK + + +R S
Sbjct: 59 -AHTLYARIPREGSRPKENYNARKKKEQGILQMERLNS 95
Score = 38 (18.4 bits), Expect = 3.2e-165, Sum P(3) = 3.2e-165
Identities = 10/38 (26%), Positives = 15/38 (39%)
Query: 249 ELRGVGLSARDMPEWKKNAYGKAFTFGQRSKLSIQEQR 286
E V + A + W+ KA F Q L E++
Sbjct: 335 EQNEVTMGAAEQQRWEAQQINKALLFDQNEWLPPGEKQ 372
>TAIR|locus:2062492 [details] [associations]
symbol:MEE29 "maternal effect embryo arrest 29"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 GO:GO:0009793
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:RIDDHRD IPI:IPI00520097
RefSeq:NP_181077.3 UniGene:At.53041 ProteinModelPortal:F4IJV4
SMR:F4IJV4 PRIDE:F4IJV4 EnsemblPlants:AT2G35340.1 GeneID:818101
KEGG:ath:AT2G35340 Uniprot:F4IJV4
Length = 1044
Score = 1605 (570.0 bits), Expect = 6.2e-165, P = 6.2e-165
Identities = 298/519 (57%), Positives = 397/519 (76%)
Query: 282 IQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCTQ 341
+QE R++LPI+ +++L+ AV D+QVLI++GETGSGKTTQ+ QYL EAGYT GK+GCTQ
Sbjct: 397 LQEDRKALPIYTYRDQLLNAVKDHQVLIIVGETGSGKTTQIPQYLHEAGYTKLGKVGCTQ 456
Query: 342 PRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLS 401
PRRVAA SVA RVA+E G +LG EVGY+IRFEDCT T++KYMTDGMLLRE+L + +L
Sbjct: 457 PRRVAAMSVAARVAQEMGGKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLRELLGEPDLG 516
Query: 402 QYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSI 461
YSVI++DEAHERT+ TD+LFGL+K + + RPDL+L+++SAT+DAE+FS +F IF
Sbjct: 517 SYSVIIVDEAHERTLRTDILFGLVKDIARARPDLKLLISSATMDAEKFSDFFDQAPIFRF 576
Query: 462 PGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEKI 521
PGR +PVDI ++ DY+D+A+ TVL IHV EP GD+L+FL GQEEI+ E+L KI
Sbjct: 577 PGRRYPVDICFTTAPEADYMDAAITTVLTIHVKEPLGDVLVFLPGQEEIEAVEENLKHKI 636
Query: 522 KALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDP 581
+ LG + EL++ P+Y+ LPSE+Q++IFEP P G RKVV+ATNIAE SLTIDGI YV+DP
Sbjct: 637 RGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDP 696
Query: 582 GFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTI 641
GF+K YNP+ ++SL++TPIS+ASA QR GRAGRT PGKCYRLYT Y +++ T+
Sbjct: 697 GFSKMKSYNPRTGMESLLVTPISKASATQRTGRAGRTSPGKCYRLYTAFNYYNDLEDNTV 756
Query: 642 PEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLTKLG 701
PEIQR NL L++K++GI+NLL+FDF+DPP +ALI ++E L++LGAL++ G LTK G
Sbjct: 757 PEIQRTNLASVVLSLKSLGIHNLLNFDFMDPPPSEALIKSLELLFALGALNQLGELTKAG 816
Query: 702 KKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTG-HIFTRPRERQAKADEKRARFF 760
++MAEFPLDP LSKM++ S CSDEI++I AM+ G IF RP+++Q AD F
Sbjct: 817 RRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGPSIFYRPKDKQVHADNAMKNFH 876
Query: 761 QPE-GDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
GDH+ L +Y +WK N+S WC EN++ RS+K+
Sbjct: 877 VGNVGDHIAFLKIYNSWKETNYSTQWCYENYIQVRSMKR 915
>UNIPROTKB|G4MTU4 [details] [associations]
symbol:MGG_11351 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp16" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001232 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12815 RefSeq:XP_003713740.1 EnsemblFungi:MGG_11351T0
GeneID:5051310 KEGG:mgr:MGG_11351 Uniprot:G4MTU4
Length = 999
Score = 1603 (569.3 bits), Expect = 1.0e-164, P = 1.0e-164
Identities = 321/639 (50%), Positives = 450/639 (70%)
Query: 170 QPAFLQGQTRVSVDLSPVKVFKNPEGSLSRTAALQSALTKERREVREQQLRT-----MID 224
+P FL G+T + L PV ++ + ++ + S + KERR+ RE+Q + M
Sbjct: 179 KPPFLDGRTVFTKQLEPVPAVRDNQSDMAVFSRKGSRVVKERRQQRERQKQAQDATNMAG 238
Query: 225 SIPKDLN--RPWED---PMPETGERHLAQELRGVGLSARDMPEWKKNAYGKAFTFGQRSK 279
+ +L + ED +P ++ A E++ + KKN G A F Q
Sbjct: 239 TALGNLMGIKGEEDGDSALPVPDDQAPA-EVKAEKSDNKFSEHMKKND-G-ASNFSQTK- 294
Query: 280 LSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGC 339
SI+EQR LP F ++ +L++ + DNQV+I++GETGSGKTTQL Q+L E GY G IGC
Sbjct: 295 -SIREQREFLPAFAVREDLMRVIRDNQVIIVVGETGSGKTTQLTQFLYEDGYGQLGMIGC 353
Query: 340 TQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDEN 399
TQPRRVAA SVAKRV+EE +LG VGYAIRFEDCT DTVIKYMTDG+LLRE L + +
Sbjct: 354 TQPRRVAAMSVAKRVSEEMEVKLGGTVGYAIRFEDCTSKDTVIKYMTDGVLLRESLNEPD 413
Query: 400 LSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIF 459
L +YS I++DEAHER +NTDVL GL K++++RR DL+LIVTSAT++A+RFS +F F
Sbjct: 414 LDRYSCIIMDEAHERALNTDVLMGLFKKILQRRRDLKLIVTSATMNAKRFSDFFGGAPDF 473
Query: 460 SIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCE 519
+IPGRTFPVD+ +SR V DY+D A+ VL IHV GDIL+F+TGQE+I+ CE + E
Sbjct: 474 TIPGRTFPVDVMFSRSPVEDYVDQAVQQVLNIHVSMGTGDILVFMTGQEDIEVTCELVRE 533
Query: 520 KIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVI 579
++ AL D P+L +LP+YS +P+++Q++IF+ APPG RK +VATNIAE SLT+DGI YV+
Sbjct: 534 RLDALN-DPPKLSILPIYSQMPADLQAKIFDRAPPGVRKCIVATNIAETSLTVDGIMYVV 592
Query: 580 DPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPT 639
D G++K VYNPK +D+L ITPISQA+A QR+GRAGRTGPGK +RL+TE A++ E+
Sbjct: 593 DAGYSKLKVYNPKMGMDTLQITPISQANASQRSGRAGRTGPGKAFRLFTEKAFKDELYIQ 652
Query: 640 TIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLTK 699
TIPEIQR NL +T L +K++G+ ++L FDF+DPP + +++ L++LGALD G +T
Sbjct: 653 TIPEIQRTNLSNTILLIKSLGVKDMLDFDFMDPPPQDTMTTSLFDLWALGALDNLGDMTD 712
Query: 700 LGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARF 759
LG+KM FP+DPPL+K+++ + + GC++E++TI++M+ ++F RP+ERQ ++D R +F
Sbjct: 713 LGRKMNFFPMDPPLAKLIIMAEEYGCTEEMITIVSMLSVPNVFYRPKERQEESDAAREKF 772
Query: 760 FQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
F PE DHLT L VY WKA S WC +F++S+SL++
Sbjct: 773 FVPESDHLTFLHVYSQWKANGHSDAWCSRHFLHSKSLRR 811
>POMBASE|SPBC1711.17 [details] [associations]
symbol:prp16 "ATP-dependent RNA helicase Prp16
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005681 "spliceosomal
complex" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC1711.17 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K12815 GO:GO:0000350 OMA:PSRSTWE PIR:T39724 RefSeq:NP_595890.2
ProteinModelPortal:Q9P774 IntAct:Q9P774 EnsemblFungi:SPBC1711.17.1
GeneID:2540006 KEGG:spo:SPBC1711.17 OrthoDB:EOG4GQTD2
NextBio:20801149 Uniprot:Q9P774
Length = 1173
Score = 1582 (562.0 bits), Expect = 4.0e-164, Sum P(2) = 4.0e-164
Identities = 310/629 (49%), Positives = 440/629 (69%)
Query: 170 QPAFLQGQTRVSVDLSPVKVFKNPEGSLSRTAALQSALTKERREVREQQLRTMIDSIPKD 229
+P FL G S + + ++P+ L+ A L S L +ERRE RE+Q +
Sbjct: 380 RPHFLDGAEFSSKKVGDITSVRDPQSDLAINARLGSRLVRERREFRERQKAASAATSLAG 439
Query: 230 LNRPWEDPMPETGERHLAQELRGVGLSARDMPEWKKNAYGKAFTFGQRSKLSIQEQRRSL 289
+ + ++ + V ++ R KK+ F R+K S +EQR L
Sbjct: 440 TSLGNVMGLKDSNDEDAKAGTTPVKVAGRSEQSNKKDT-----EFA-RTK-SYREQREFL 492
Query: 290 PIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCTQPRRVAATS 349
P F ++ +L+ + DNQVLI++GETGSGKTTQLAQ+L E GY G IGCTQPRRVAA S
Sbjct: 493 PAFAVREQLLSVIRDNQVLIVVGETGSGKTTQLAQFLYEDGYHRNGMIGCTQPRRVAAMS 552
Query: 350 VAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIMLD 409
VAKRV+EE G RLG VGY+IRFED TGPDTVIKYMTDG+LLRE L+ NL +YSVI++D
Sbjct: 553 VAKRVSEEMGVRLGSTVGYSIRFEDVTGPDTVIKYMTDGVLLRESLMQNNLEKYSVIIMD 612
Query: 410 EAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPVD 469
EAHER++NTD+L GLLK+++ RR D++L+VTSAT+++++FS +F F+IPGRT+PVD
Sbjct: 613 EAHERSLNTDILMGLLKKVLSRRRDIKLLVTSATMNSQKFSDFFGGAPQFTIPGRTYPVD 672
Query: 470 INYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEKIKALGKDVP 529
I +++ +DY+++A+ VLQIH+ +P GDIL+F+TGQE+I+ CE + +++ L D P
Sbjct: 673 IMFAKAPCSDYVEAAVRQVLQIHLSQPAGDILVFMTGQEDIEATCEIIADRLNQL-HDAP 731
Query: 530 ELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVY 589
L +LP+YS +P+++Q++IF+ A PG RKVVVATNIAE SLT+ GI YV+D G+ K +Y
Sbjct: 732 RLSILPIYSQMPADLQAKIFDSAEPGVRKVVVATNIAETSLTVHGISYVVDTGYCKLKMY 791
Query: 590 NPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINL 649
N K +D+L +TPISQA+A QRAGRAGRTGPG YRLYTE AY EM TT+PEIQR NL
Sbjct: 792 NSKLGIDTLQVTPISQANANQRAGRAGRTGPGIAYRLYTEMAYIREMFETTLPEIQRTNL 851
Query: 650 VHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPL 709
+T L +K++G+ + FDF+D P L++++ +L++LGALD G LT LGKKM+ FP+
Sbjct: 852 SNTVLILKSLGVEEISDFDFMDRPPNDTLMASLYELWTLGALDNFGKLTTLGKKMSLFPM 911
Query: 710 DPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQPEGDHLTL 769
DP LSK+++ + D C++EI+TI++M+ +F RP+ER ++D R +F PE DHL L
Sbjct: 912 DPSLSKLIIIAEDYKCTEEIITIVSMLSVPSVFYRPKERAEESDAAREKFNVPESDHLML 971
Query: 770 LAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
L +Y+ W+ +S WC ++F++S++LK+
Sbjct: 972 LNIYQHWQRNGYSNSWCSKHFLHSKTLKR 1000
Score = 37 (18.1 bits), Expect = 4.0e-164, Sum P(2) = 4.0e-164
Identities = 11/51 (21%), Positives = 24/51 (47%)
Query: 101 EFENDRERSGRYCKSNPPMLKDMPVSRMGGVSGV-LASNEYPRYDXXXXXG 150
EF N GR+ ++ ++ D+ S +G + + ++ ++ P D G
Sbjct: 47 EFSNALHTFGRFSDNDSVLIYDLCKSIIGLETNLGISKDKLPGNDGSQVAG 97
>UNIPROTKB|E2RC56 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 KO:K12815 OMA:PSRSTWE CTD:9785
EMBL:AAEX03004090 RefSeq:XP_536800.2 ProteinModelPortal:E2RC56
Ensembl:ENSCAFT00000032225 GeneID:479669 KEGG:cfa:479669
NextBio:20854813 Uniprot:E2RC56
Length = 1226
Score = 1570 (557.7 bits), Expect = 6.5e-164, Sum P(2) = 6.5e-164
Identities = 317/637 (49%), Positives = 438/637 (68%)
Query: 171 PAFLQGQTRVSVDLSPVKVFKNPEGSLSRTAALQSALTKERREVREQQLRTMIDSIPKDL 230
P FL G+ + PV K+ L+ A S ++ RE +E++ K
Sbjct: 413 PPFLDGRIVFTKQPEPVIPVKDATSDLAIIARKGSQTVRKHREQKERK---------KAQ 463
Query: 231 NRPWE-------DPMPETGERHLAQELRGVG-LSARDMPEWKKNAYGKAFTFGQ-RSKLS 281
++ WE D M E + L G + R ++ + K+ + K S
Sbjct: 464 HKHWELAGTKLGDIMGVKKEEEPDKALTEDGKVDYRTEQKFADHMKKKSEASSEFAKKKS 523
Query: 282 IQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCTQ 341
I EQR+ LPIF ++ EL+ + DN ++I++GETGSGKTTQL QYL E GYT G IGCTQ
Sbjct: 524 ILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQ 583
Query: 342 PRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLS 401
PRRVAA SVAKRV+EE G LGEEVGYAIRFEDCT +T+IKYMTDG+LLRE L + +L
Sbjct: 584 PRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLREADLD 643
Query: 402 QYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSI 461
YS +++DEAHER++NTDVLFGLL+++V RR DL+LIVTSAT+DAE+F+ +F N IF I
Sbjct: 644 HYSAVIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFAAFFGNVPIFHI 703
Query: 462 PGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEKI 521
PGRTFPVDI +S+ DY+++A+ LQ+H+ GDIL+F+ GQE+I+ + + E +
Sbjct: 704 PGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHL 763
Query: 522 KALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDP 581
+ L ++ P L VLP+YS LPS++Q++IF+ AP G RK +VATNIAE SLT+DGI +VID
Sbjct: 764 EEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDS 822
Query: 582 GFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTI 641
G+ K V+NP+ +D+L I PISQA+A QR+GRAGRTGPG+C+RLYT+SAY++E+ TT+
Sbjct: 823 GYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTV 882
Query: 642 PEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLTKLG 701
PEIQR NL + L +K++G+ +LL F F+DPP ++++M QL+ LGALD G LT G
Sbjct: 883 PEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTG 942
Query: 702 KKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQ 761
+ M EFPLDP LSKML+ S D+GCS EIL I++M+ IF RP+ R+ ++D+ R +F
Sbjct: 943 RLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREKFAV 1002
Query: 762 PEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
PE DHLT L VY WK N+S WC ++F+++++++K
Sbjct: 1003 PESDHLTYLNVYLQWKNNNYSTIWCNDHFIHAKAMRK 1039
Score = 47 (21.6 bits), Expect = 6.5e-164, Sum P(2) = 6.5e-164
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 81 KPKLQSKKKSGRDRKTNYKAEFENDRERSGRYCKS 115
K + KK+ RDR ++ K E ++R+RS +S
Sbjct: 149 KEEKDRKKERSRDRDSDRKRE-RDERDRSRHSSRS 182
Score = 38 (18.4 bits), Expect = 5.8e-163, Sum P(2) = 5.8e-163
Identities = 6/21 (28%), Positives = 14/21 (66%)
Query: 85 QSKKKSGRDRKTNYKAEFEND 105
+S ++S RDR + ++ + +D
Sbjct: 243 RSHRQSSRDRDRSVRSRYSDD 263
Score = 37 (18.1 bits), Expect = 7.4e-163, Sum P(2) = 7.4e-163
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 86 SKKKSGRDRKTNYKAEFENDRER 108
+ K +DRK + ++DR+R
Sbjct: 146 ASSKEEKDRKKERSRDRDSDRKR 168
>WB|WBGene00003389 [details] [associations]
symbol:mog-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0006898 GO:GO:0002119
GO:GO:0008380 GO:GO:0006397 GO:GO:0010171 GO:GO:0003676
GO:GO:0042127 GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570 PIR:S41025
RefSeq:NP_499212.1 UniGene:Cel.5743 ProteinModelPortal:P34498
SMR:P34498 IntAct:P34498 STRING:P34498 PaxDb:P34498 PRIDE:P34498
EnsemblMetazoa:K03H1.2 GeneID:176409 KEGG:cel:CELE_K03H1.2
UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 1572 (558.4 bits), Expect = 1.7e-163, Sum P(2) = 1.7e-163
Identities = 310/640 (48%), Positives = 438/640 (68%)
Query: 171 PAFLQGQTRVSVDLSPVKVFKNPEGSLSRTAALQSALTKERREVREQQLRTMIDSIPKDL 230
P FL G+ + P+ + ++ +AA S ++RREV +++ K
Sbjct: 324 PPFLDGRIVFTKQAQPIIPVVDTTCDMAVSAARGSVAVRKRREVEDRK---------KAQ 374
Query: 231 NRPWEDPMPETGERHLAQELRGVGLSARDMPEWKKNAYGKAFTFGQRSK----------- 279
++ WE + G +E + D + Y ++ F K
Sbjct: 375 DKHWELAGSKLGNLMGVKEKKD---ETADPEDDDSGNYKESHQFASHMKDNEAVSDFAME 431
Query: 280 LSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGC 339
SI++QR LP+F + +++ + +N V+I++GETGSGKTTQLAQYL E G+ G IGC
Sbjct: 432 KSIKQQREYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLEDGFGDSGLIGC 491
Query: 340 TQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDEN 399
TQPRRVAA SVA+RVA+E G LG++VGYAIRFEDCT T+IKYMTDG+LLRE L D +
Sbjct: 492 TQPRRVAAMSVARRVADEMGVDLGQDVGYAIRFEDCTSEKTIIKYMTDGILLRECLGDGS 551
Query: 400 LSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFF-NCNI 458
L QYS I++DEAHER++NTDVLFGLL++++ +R DL+LIVTSAT+DA++F+ +F NC
Sbjct: 552 LDQYSAIIMDEAHERSLNTDVLFGLLREVIAKRADLKLIVTSATMDADKFADFFGGNCPT 611
Query: 459 FSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLC 518
F+IPGRTFPV++ ++R V DY+D+A+ + IH+ +GDIL+F+ GQE+I+ CE +
Sbjct: 612 FTIPGRTFPVELFHARTPVEDYVDAAVKQAVTIHLGGMDGDILIFMPGQEDIECTCEMIK 671
Query: 519 EKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYV 578
EK+ L + P L VLP+YS LPS++Q++IF+ AP G RK +VATNIAE SLT+DGI +V
Sbjct: 672 EKLGELD-EAPPLAVLPIYSQLPSDLQAKIFQRAPGGMRKAIVATNIAETSLTVDGILFV 730
Query: 579 IDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSP 638
IDPGF K VYNP+ +D+L I P+SQASA QR GRAGRTGPG+CYRLYTE ++ E+
Sbjct: 731 IDPGFCKMKVYNPRIGMDALSIFPVSQASANQRTGRAGRTGPGQCYRLYTERQFKDELLK 790
Query: 639 TTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLT 698
+T+PEIQR NL + L +K++G+++LL F F+D P ++++M QL++LGALD G LT
Sbjct: 791 STVPEIQRTNLANVVLLLKSLGVDDLLKFHFMDAPPQDNMLNSMYQLWTLGALDNTGQLT 850
Query: 699 KLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRAR 758
+G+KM EFPLDP LSKML+ S ++GCSDE+LTI++M+ IF RP+ R+ +AD K+ +
Sbjct: 851 PMGRKMVEFPLDPTLSKMLIMSAEMGCSDEVLTIVSMLSVPAIFFRPKGREEEADAKKEK 910
Query: 759 FFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
F PE DHLT L VY W+ +S WC +N+++ ++LKK
Sbjct: 911 FQVPESDHLTFLNVYIQWRTHKYSAKWCADNYLHVKALKK 950
Score = 41 (19.5 bits), Expect = 1.7e-163, Sum P(2) = 1.7e-163
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 83 KLQSKKKSGRDRKTNYKAEFEN---DRERSGR 111
K+ K + DR YK+ ++ DR+RS R
Sbjct: 77 KVHEKHRDRDDRGMKYKSRDDDRRRDRDRSER 108
>UNIPROTKB|P34498 [details] [associations]
symbol:mog-1 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0006898
GO:GO:0002119 GO:GO:0008380 GO:GO:0006397 GO:GO:0010171
GO:GO:0003676 GO:GO:0042127 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570
PIR:S41025 RefSeq:NP_499212.1 UniGene:Cel.5743
ProteinModelPortal:P34498 SMR:P34498 IntAct:P34498 STRING:P34498
PaxDb:P34498 PRIDE:P34498 EnsemblMetazoa:K03H1.2 GeneID:176409
KEGG:cel:CELE_K03H1.2 UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 1572 (558.4 bits), Expect = 1.7e-163, Sum P(2) = 1.7e-163
Identities = 310/640 (48%), Positives = 438/640 (68%)
Query: 171 PAFLQGQTRVSVDLSPVKVFKNPEGSLSRTAALQSALTKERREVREQQLRTMIDSIPKDL 230
P FL G+ + P+ + ++ +AA S ++RREV +++ K
Sbjct: 324 PPFLDGRIVFTKQAQPIIPVVDTTCDMAVSAARGSVAVRKRREVEDRK---------KAQ 374
Query: 231 NRPWEDPMPETGERHLAQELRGVGLSARDMPEWKKNAYGKAFTFGQRSK----------- 279
++ WE + G +E + D + Y ++ F K
Sbjct: 375 DKHWELAGSKLGNLMGVKEKKD---ETADPEDDDSGNYKESHQFASHMKDNEAVSDFAME 431
Query: 280 LSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGC 339
SI++QR LP+F + +++ + +N V+I++GETGSGKTTQLAQYL E G+ G IGC
Sbjct: 432 KSIKQQREYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLEDGFGDSGLIGC 491
Query: 340 TQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDEN 399
TQPRRVAA SVA+RVA+E G LG++VGYAIRFEDCT T+IKYMTDG+LLRE L D +
Sbjct: 492 TQPRRVAAMSVARRVADEMGVDLGQDVGYAIRFEDCTSEKTIIKYMTDGILLRECLGDGS 551
Query: 400 LSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFF-NCNI 458
L QYS I++DEAHER++NTDVLFGLL++++ +R DL+LIVTSAT+DA++F+ +F NC
Sbjct: 552 LDQYSAIIMDEAHERSLNTDVLFGLLREVIAKRADLKLIVTSATMDADKFADFFGGNCPT 611
Query: 459 FSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLC 518
F+IPGRTFPV++ ++R V DY+D+A+ + IH+ +GDIL+F+ GQE+I+ CE +
Sbjct: 612 FTIPGRTFPVELFHARTPVEDYVDAAVKQAVTIHLGGMDGDILIFMPGQEDIECTCEMIK 671
Query: 519 EKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYV 578
EK+ L + P L VLP+YS LPS++Q++IF+ AP G RK +VATNIAE SLT+DGI +V
Sbjct: 672 EKLGELD-EAPPLAVLPIYSQLPSDLQAKIFQRAPGGMRKAIVATNIAETSLTVDGILFV 730
Query: 579 IDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSP 638
IDPGF K VYNP+ +D+L I P+SQASA QR GRAGRTGPG+CYRLYTE ++ E+
Sbjct: 731 IDPGFCKMKVYNPRIGMDALSIFPVSQASANQRTGRAGRTGPGQCYRLYTERQFKDELLK 790
Query: 639 TTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLT 698
+T+PEIQR NL + L +K++G+++LL F F+D P ++++M QL++LGALD G LT
Sbjct: 791 STVPEIQRTNLANVVLLLKSLGVDDLLKFHFMDAPPQDNMLNSMYQLWTLGALDNTGQLT 850
Query: 699 KLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRAR 758
+G+KM EFPLDP LSKML+ S ++GCSDE+LTI++M+ IF RP+ R+ +AD K+ +
Sbjct: 851 PMGRKMVEFPLDPTLSKMLIMSAEMGCSDEVLTIVSMLSVPAIFFRPKGREEEADAKKEK 910
Query: 759 FFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
F PE DHLT L VY W+ +S WC +N+++ ++LKK
Sbjct: 911 FQVPESDHLTFLNVYIQWRTHKYSAKWCADNYLHVKALKK 950
Score = 41 (19.5 bits), Expect = 1.7e-163, Sum P(2) = 1.7e-163
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 83 KLQSKKKSGRDRKTNYKAEFEN---DRERSGR 111
K+ K + DR YK+ ++ DR+RS R
Sbjct: 77 KVHEKHRDRDDRGMKYKSRDDDRRRDRDRSER 108
>UNIPROTKB|Q92620 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;IDA;TAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=TAS] [GO:0006406 "mRNA export from nucleus"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0031124 "mRNA 3'-end
processing" evidence=TAS] Reactome:REACT_71 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AC004682
GO:GO:0005524 GO:GO:0005654 Reactome:REACT_1675 GO:GO:0003676
GO:GO:0006406 GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CH471166 Reactome:REACT_1788
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0006369 GO:GO:0031124 Reactome:REACT_78
HOVERGEN:HBG039428 KO:K12815 OMA:PSRSTWE CTD:9785 EMBL:AF038391
EMBL:D86977 EMBL:BC004235 EMBL:BC008340 IPI:IPI00294211
RefSeq:NP_054722.2 UniGene:Hs.151218 ProteinModelPortal:Q92620
SMR:Q92620 IntAct:Q92620 STRING:Q92620 PhosphoSite:Q92620
DMDM:85700389 PaxDb:Q92620 PeptideAtlas:Q92620 PRIDE:Q92620
DNASU:9785 Ensembl:ENST00000268482 GeneID:9785 KEGG:hsa:9785
UCSC:uc002fcb.3 GeneCards:GC16P072127 HGNC:HGNC:17211 HPA:HPA041347
MIM:605584 neXtProt:NX_Q92620 PharmGKB:PA27225 InParanoid:Q92620
OrthoDB:EOG4Z62MS PhylomeDB:Q92620 ChiTaRS:DHX38 GenomeRNAi:9785
NextBio:36846 ArrayExpress:Q92620 Bgee:Q92620 CleanEx:HS_DHX38
Genevestigator:Q92620 GermOnline:ENSG00000140829 Uniprot:Q92620
Length = 1227
Score = 1569 (557.4 bits), Expect = 5.8e-163, Sum P(2) = 5.8e-163
Identities = 295/520 (56%), Positives = 397/520 (76%)
Query: 279 KLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIG 338
K SI EQR+ LPIF ++ EL+ + DN ++I++GETGSGKTTQL QYL E GYT G IG
Sbjct: 522 KKSILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIG 581
Query: 339 CTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDE 398
CTQPRRVAA SVAKRV+EE G LGEEVGYAIRFEDCT +T+IKYMTDG+LLRE L +
Sbjct: 582 CTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLREA 641
Query: 399 NLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNI 458
+L YS I++DEAHER++NTDVLFGLL+++V RR DL+LIVTSAT+DAE+F+ +F N I
Sbjct: 642 DLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFAAFFGNVPI 701
Query: 459 FSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLC 518
F IPGRTFPVDI +S+ DY+++A+ LQ+H+ GDIL+F+ GQE+I+ + +
Sbjct: 702 FHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIV 761
Query: 519 EKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYV 578
E ++ L ++ P L VLP+YS LPS++Q++IF+ AP G RK +VATNIAE SLT+DGI +V
Sbjct: 762 EHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFV 820
Query: 579 IDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSP 638
ID G+ K V+NP+ +D+L I PISQA+A QR+GRAGRTGPG+C+RLYT+SAY++E+
Sbjct: 821 IDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLT 880
Query: 639 TTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLT 698
TT+PEIQR NL + L +K++G+ +LL F F+DPP ++++M QL+ LGALD G LT
Sbjct: 881 TTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLT 940
Query: 699 KLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRAR 758
G+ M EFPLDP LSKML+ S D+GCS EIL I++M+ IF RP+ R+ ++D+ R +
Sbjct: 941 STGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREK 1000
Query: 759 FFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
F PE DHLT L VY WK N+S WC ++F+++++++K
Sbjct: 1001 FAVPESDHLTYLNVYLQWKNNNYSTIWCNDHFIHAKAMRK 1040
Score = 39 (18.8 bits), Expect = 5.8e-163, Sum P(2) = 5.8e-163
Identities = 15/56 (26%), Positives = 25/56 (44%)
Query: 211 RREVREQQLRTMIDSIPKDLNRP-WEDPMPETGERHLAQELRGVGLSARDMPEWKK 265
R++ + R S P ++ WE ER +E GV S+++ +WKK
Sbjct: 105 RKDRHYRSARVETPSHPGGVSEEFWERSRQRERER---RE-HGVYASSKEEKDWKK 156
>RGD|1310345 [details] [associations]
symbol:Dhx38 "DEAH (Asp-Glu-Ala-His) box polypeptide 38"
species:10116 "Rattus norvegicus" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310345
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OrthoDB:EOG4Z62MS
IPI:IPI00371467 PRIDE:D4A321 Ensembl:ENSRNOT00000019810
UCSC:RGD:1310345 Uniprot:D4A321
Length = 1228
Score = 1563 (555.3 bits), Expect = 5.8e-163, Sum P(2) = 5.8e-163
Identities = 293/520 (56%), Positives = 397/520 (76%)
Query: 279 KLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIG 338
K SI EQR+ LPIF ++ EL+ + DN ++I++GETGSGKTTQL QYL + GYT G IG
Sbjct: 523 KKSILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHQDGYTDYGMIG 582
Query: 339 CTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDE 398
CTQPRRVAA SVAKRV+EE G LGEEVGYAIRFEDCT +T+IKYMTDG+LLRE L +
Sbjct: 583 CTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLREA 642
Query: 399 NLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNI 458
+L YS I++DEAHER++NTDVLFGLL+++V RR DL+LIVTSAT+DA++F+ +F N I
Sbjct: 643 DLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDADKFAAFFGNVPI 702
Query: 459 FSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLC 518
F IPGRTFPVDI +S+ DY+++A+ LQ+H+ GDIL+F+ GQE+I+ + +
Sbjct: 703 FHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIV 762
Query: 519 EKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYV 578
E ++ L ++ P L VLP+YS LPS++Q++IF+ AP G RK +VATNIAE SLT+DGI +V
Sbjct: 763 EHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFV 821
Query: 579 IDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSP 638
ID G+ K V+NP+ +D+L I PISQA+A QR+GRAGRTGPG+C+RLYT+SAY++E+
Sbjct: 822 IDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLT 881
Query: 639 TTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLT 698
TT+PEIQR NL + L +K++G+ +LL F F+DPP ++++M QL+ LGALD G LT
Sbjct: 882 TTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLT 941
Query: 699 KLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRAR 758
G+ M EFPLDP LSKML+ S D+GCS EIL I++M+ IF RP+ R+ ++D+ R +
Sbjct: 942 STGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREK 1001
Query: 759 FFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
F PE DHLT L VY WK N+S WC ++F+++++++K
Sbjct: 1002 FAVPESDHLTYLNVYLQWKNNNYSTIWCNDHFIHAKAMRK 1041
Score = 45 (20.9 bits), Expect = 5.8e-163, Sum P(2) = 5.8e-163
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 87 KKKSGRDRKTNYKAEFENDRERSGRYCKS 115
KK+ RDR + K + ++R+RS +S
Sbjct: 155 KKEKSRDRDHDRKRDRADERDRSRHSSRS 183
Score = 38 (18.4 bits), Expect = 3.2e-162, Sum P(2) = 3.2e-162
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 86 SKKKSGRDRKTNYKAEFENDRER 108
+ K +DRK + ++DR+R
Sbjct: 146 ASSKEDKDRKKEKSRDRDHDRKR 168
>FB|FBgn0026713 [details] [associations]
symbol:l(1)G0007 "lethal (1) G0007" species:7227 "Drosophila
melanogaster" [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0002121 "inter-male
aggressive behavior" evidence=IMP] [GO:0007476 "imaginal
disc-derived wing morphogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0005681 GO:GO:0003676 GO:GO:0002121
GO:GO:0007476 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0000381 KO:K12815 GeneTree:ENSGT00700000104877 OMA:PSRSTWE
UniGene:Dm.4249 GeneID:32373 KEGG:dme:Dmel_CG32604
FlyBase:FBgn0026713 ChiTaRS:l(1)G0007 GenomeRNAi:32373
NextBio:778160 EMBL:AY058553 RefSeq:NP_572947.1 SMR:Q9VY54
MINT:MINT-334469 STRING:Q9VY54 EnsemblMetazoa:FBtr0073900
UCSC:CG32604-RA InParanoid:Q9VY54 Uniprot:Q9VY54
Length = 1222
Score = 1558 (553.5 bits), Expect = 6.6e-162, Sum P(2) = 6.6e-162
Identities = 316/638 (49%), Positives = 442/638 (69%)
Query: 171 PAFLQGQTRVSVDLSPVKVFKNPEGSLSRTAALQSALTK---ERREVREQQLR------T 221
P FL G+ + PV K+P ++ A SAL + E++E R+ Q + T
Sbjct: 413 PPFLDGRIVFTKQPEPVVPVKDPTSDMALLARKGSALVRNYREQKERRKAQKKHWELSGT 472
Query: 222 MIDSIPKDLNRPW-EDPMPETGERHLAQELRGVGLSARDMPEWKKNAYGKAFTFGQRSKL 280
+ +I + RP ED M E+ A + R A M + ++ GK+ F + K
Sbjct: 473 KLGNI-MGVQRPQDEDDMRFDKEKDKA-DYRKDQKFADHMRD--QDTGGKS-DFSR--KK 525
Query: 281 SIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCT 340
+I EQRR LP+F + EL+ + +N V+I++GETGSGKTTQL QYL E GY+ +G IGCT
Sbjct: 526 TISEQRRFLPVFASRQELLNVIRENSVIIIVGETGSGKTTQLTQYLHEDGYSKRGMIGCT 585
Query: 341 QPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENL 400
QPRRVAA SVAKRV++E +LGE+VGYAIRFEDCT TVIKYMTDG+LLRE L D L
Sbjct: 586 QPRRVAAMSVAKRVSDEMDTQLGEDVGYAIRFEDCTSERTVIKYMTDGILLRESLRDPEL 645
Query: 401 SQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFS 460
YS I++DEAHER+++TDVLFGLL+++V RR DL+LIVTSAT+D+ +F+ +F N F+
Sbjct: 646 DSYSAIIMDEAHERSLSTDVLFGLLREIVARRHDLKLIVTSATMDSSKFATFFGNVPTFT 705
Query: 461 IPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEK 520
IPGRTFPVD+ +S+ DY++SA+ LQ+H+ EGD+L+F+ GQE+I+ CE L E+
Sbjct: 706 IPGRTFPVDVMFSKNTCEDYVESAVKQALQVHLTPNEGDMLIFMPGQEDIEVTCEVLEER 765
Query: 521 IKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVID 580
+ + + P L +LP+YS LPS++Q++IF+ + G RK VVATNIAE SLT+DGI YVID
Sbjct: 766 LAEID-NAPALSILPIYSQLPSDLQAKIFQKSSDGLRKCVVATNIAETSLTVDGIIYVID 824
Query: 581 PGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTT 640
G+ K VYNP+ +D+L I PISQA+A QR+GRAGRTGPG+ YRLYT+ Y+ E+ T
Sbjct: 825 SGYCKLKVYNPRIGMDALQIYPISQANANQRSGRAGRTGPGQAYRLYTQRQYKDELLALT 884
Query: 641 IPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLTKL 700
+PEIQR NL +T L +K++G+ +LL F F+DPP +++++ QL+ LGALD G LT L
Sbjct: 885 VPEIQRTNLANTVLLLKSLGVVDLLQFHFMDPPPQDNILNSLYQLWILGALDHTGALTTL 944
Query: 701 GKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFF 760
G++MAEFPLDPP +ML+ + +GCS E+L I++M+ IF RP+ R+ +AD R +F
Sbjct: 945 GRQMAEFPLDPPQCQMLIVACRMGCSAEVLIIVSMLSVPSIFYRPKGREDEADGVREKFQ 1004
Query: 761 QPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
+PE DHLT L VY+ W+ N+S WC E+F++ ++++K
Sbjct: 1005 RPESDHLTYLNVYQQWRQNNYSSTWCNEHFIHIKAMRK 1042
Score = 40 (19.1 bits), Expect = 6.6e-162, Sum P(2) = 6.6e-162
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 84 LQSKKKSGRDRKTNYKAEFENDRER 108
+ S GRDR ++ + DR+R
Sbjct: 148 VSSTAAEGRDRDRDWDRDRRRDRDR 172
Score = 38 (18.4 bits), Expect = 1.1e-161, Sum P(2) = 1.1e-161
Identities = 9/18 (50%), Positives = 9/18 (50%)
Query: 92 RDRKTNYKAEFENDRERS 109
RDR E E DR RS
Sbjct: 176 RDRDRRQHRERERDRHRS 193
Score = 38 (18.4 bits), Expect = 1.1e-161, Sum P(2) = 1.1e-161
Identities = 13/54 (24%), Positives = 25/54 (46%)
Query: 81 KPKLQSKKKSGRDRKTNYKAEF--ENDRERSGRYCKSNPPMLKDMPVSRMGGVS 132
+ + Q +++ RDR ++ + + DR+RS + P P GG+S
Sbjct: 178 RDRRQHRERE-RDRHRSWDRDRGRDRDRDRSMSERSVHTPREPGTPGGSSGGIS 230
>UNIPROTKB|F1S3A8 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104877 EMBL:CU914723
Ensembl:ENSSSCT00000003045 OMA:IATIPEI Uniprot:F1S3A8
Length = 766
Score = 1568 (557.0 bits), Expect = 5.1e-161, P = 5.1e-161
Identities = 295/520 (56%), Positives = 396/520 (76%)
Query: 279 KLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIG 338
K SI EQR+ LPIF ++ EL+ + DN ++I++GETGSGKTTQL QYL E GYT G IG
Sbjct: 61 KKSILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIG 120
Query: 339 CTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDE 398
CTQPRRVAA SVAKRV+EE G LGEEVGYAIRFEDCT T+IKYMTDG+LLRE L +
Sbjct: 121 CTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLRESLREA 180
Query: 399 NLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNI 458
+L YS I++DEAHER++NTDVLFGLL+++V RR DL+LIVTSAT+DAE+F+ +F N I
Sbjct: 181 DLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFASFFGNVPI 240
Query: 459 FSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLC 518
F IPGRTFPVDI +S+ DY+++A+ LQ+H+ GDIL+F+ GQE+I+ + +
Sbjct: 241 FHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIV 300
Query: 519 EKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYV 578
E ++ L ++ P L VLP+YS LPS++Q++IF+ AP G RK +VATNIAE SLT+DGI +V
Sbjct: 301 EHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFV 359
Query: 579 IDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSP 638
ID G+ K V+NP+ +D+L I PISQA+A QR+GRAGRTGPG+C+RLYT+SAY++E+
Sbjct: 360 IDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLT 419
Query: 639 TTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLT 698
TT+PEIQR NL + L +K++G+ +LL F F+DPP ++++M QL+ LGALD G LT
Sbjct: 420 TTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLT 479
Query: 699 KLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRAR 758
G+ M EFPLDP LSKML+ S D+GCS EIL I++M+ IF RP+ R+ ++D+ R +
Sbjct: 480 STGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREK 539
Query: 759 FFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
F PE DHLT L VY WK N+S WC ++F+++++++K
Sbjct: 540 FAVPESDHLTYLNVYLQWKNNNYSTIWCNDHFIHAKAMRK 579
>UNIPROTKB|Q17R09 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K12815
EMBL:BC118085 IPI:IPI00690755 RefSeq:NP_001069266.1
UniGene:Bt.42896 ProteinModelPortal:Q17R09 STRING:Q17R09
PRIDE:Q17R09 GeneID:520046 KEGG:bta:520046 CTD:9785
NextBio:20873012 Uniprot:Q17R09
Length = 1227
Score = 1567 (556.7 bits), Expect = 6.5e-161, P = 6.5e-161
Identities = 317/637 (49%), Positives = 437/637 (68%)
Query: 171 PAFLQGQTRVSVDLSPVKVFKNPEGSLSRTAALQSALTKERREVREQQLRTMIDSIPKDL 230
P FL G+ + PV K+ L+ A S ++ RE +E++ K
Sbjct: 414 PPFLDGRIVFTKQPEPVIPVKDATSDLAIIARKGSQTVRKHREQKERK---------KAQ 464
Query: 231 NRPWE-------DPMPETGERHLAQELRGVG-LSARDMPEWKKNAYGKAFTFGQ-RSKLS 281
++ WE D M E + L G + R ++ + K+ + K S
Sbjct: 465 HKHWELAGTKLGDIMGVKKEEEPDKSLTEDGKVDYRTEQKFADHMKKKSEASSEFAKKKS 524
Query: 282 IQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCTQ 341
I EQR+ LPIF ++ EL+ + DN ++I++GETGSGKTTQL QYL E GYT G IGCTQ
Sbjct: 525 ILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQ 584
Query: 342 PRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLS 401
PRRVAA SVAKRV+EE G LGEEVGYAIRFEDCT T+IKYMTDG+LLRE L + +L
Sbjct: 585 PRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLRESLREADLD 644
Query: 402 QYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSI 461
YS I++DEAHER++NTDVLFGLL+++V RR DL+LIVTSAT+DAE+F+ +F N IF I
Sbjct: 645 HYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFASFFGNVPIFHI 704
Query: 462 PGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEKI 521
PGRTFPVDI +S+ DY+++A+ LQ+H+ GDIL+F+ GQE+I+ + + E +
Sbjct: 705 PGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHL 764
Query: 522 KALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDP 581
+ L ++ P L VLP+YS LPS++Q++IF+ AP G RK +VATNIAE SLT+DGI +VID
Sbjct: 765 EEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDS 823
Query: 582 GFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTI 641
G+ K V+NP+ +D+L I PISQA+A QR+GRAGRTGPG+C+RLYT+SAY++E+ TT+
Sbjct: 824 GYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTV 883
Query: 642 PEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLTKLG 701
PEIQR NL + L +K++G+ +LL F F+DPP ++++M QL+ LGALD G LT G
Sbjct: 884 PEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTG 943
Query: 702 KKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQ 761
+ M EFPLDP LSKML+ S D+GCS EIL I++M+ IF RP+ R+ ++D+ R +F
Sbjct: 944 RLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREKFAV 1003
Query: 762 PEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
PE DHL+ L VY WK N+S WC ++F+++++++K
Sbjct: 1004 PESDHLSYLNVYLQWKNNNYSTIWCNDHFIHAKAMRK 1040
>ZFIN|ZDB-GENE-040426-1144 [details] [associations]
symbol:dhx38 "DEAH (Asp-Glu-Ala-His) box
polypeptide 38" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-040426-1144 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 KO:K12815 CTD:9785 OrthoDB:EOG4Z62MS
EMBL:BC063744 IPI:IPI00493120 RefSeq:NP_957170.1 UniGene:Dr.38854
ProteinModelPortal:Q6P404 STRING:Q6P404 PRIDE:Q6P404 GeneID:393850
KEGG:dre:393850 NextBio:20814835 ArrayExpress:Q6P404 Bgee:Q6P404
Uniprot:Q6P404
Length = 1258
Score = 1549 (550.3 bits), Expect = 9.6e-161, Sum P(2) = 9.6e-161
Identities = 287/520 (55%), Positives = 395/520 (75%)
Query: 279 KLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIG 338
K ++ EQR+ LPIF ++ +L+ + DN ++I++GETGSGKTTQL QYL E GYT+ G +G
Sbjct: 553 KKTLLEQRQYLPIFAVRQQLLNIIRDNNIVIVVGETGSGKTTQLTQYLHEDGYTSYGMVG 612
Query: 339 CTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDE 398
CTQPRRVAA SVAKRV+EE LGEEVGYAIRFEDCT T+IKYMTDG+LLRE L +
Sbjct: 613 CTQPRRVAAMSVAKRVSEEMNSNLGEEVGYAIRFEDCTSEKTMIKYMTDGILLRESLRES 672
Query: 399 NLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNI 458
+L YS +++DEAHER++NTDVLFGLL+++V RR DL+LIVTSAT+D+++F+ +F N I
Sbjct: 673 DLDHYSAVIMDEAHERSLNTDVLFGLLREVVSRRSDLKLIVTSATMDSDKFASFFGNVPI 732
Query: 459 FSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLC 518
F IPGRTFPVDI +S+ DY+++A+ LQIH+ GDIL+F+ GQE+I+ + +
Sbjct: 733 FHIPGRTFPVDILFSKTPQEDYVEAAVKQALQIHLSGMVGDILIFMPGQEDIEVTSDQIV 792
Query: 519 EKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYV 578
E++ L ++ P L VLP+YS LPS++Q++IF+ AP G RK +VATNIAE SLT+DGI +V
Sbjct: 793 ERLADL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFV 851
Query: 579 IDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSP 638
+D G+ K V+NP+ +D+L + PISQA+A QRAGRAGRTGPG+CYRLYT+SA+++EM
Sbjct: 852 VDSGYCKLKVFNPRIGMDALQVYPISQANANQRAGRAGRTGPGQCYRLYTQSAFKNEMLT 911
Query: 639 TTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLT 698
TTIPEIQR NL + L +K++G+ +LL F F+DPP ++++M QL+ LGALD G LT
Sbjct: 912 TTIPEIQRTNLANVVLLLKSLGVQDLLLFHFMDPPPEDNMLNSMYQLWILGALDNTGALT 971
Query: 699 KLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRAR 758
G+ M EFPLDP LSKML+ S D+ CS +IL I++M+ IF RP+ R+ ++D+ R +
Sbjct: 972 PTGRLMVEFPLDPALSKMLIVSCDMSCSADILIIVSMLSVPSIFYRPKGREEESDQVREK 1031
Query: 759 FFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
F PE DHLT L VY WK N+S WC ++F+++++++K
Sbjct: 1032 FSVPESDHLTYLNVYLQWKNNNYSSIWCNDHFIHTKAMRK 1071
Score = 38 (18.4 bits), Expect = 9.6e-161, Sum P(2) = 9.6e-161
Identities = 10/25 (40%), Positives = 10/25 (40%)
Query: 103 ENDRERSGRYCKSNPPMLKDMPVSR 127
E DR G Y S KD SR
Sbjct: 134 EKDRREHGVYASSKEDKSKDKNRSR 158
>TAIR|locus:2065210 [details] [associations]
symbol:AT2G47250 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0008380
GO:GO:0006397 GO:GO:0009941 GO:GO:0003676 EMBL:AC002337
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:AY128301 EMBL:BT004534 IPI:IPI00540033 PIR:H84912
RefSeq:NP_182247.1 UniGene:At.36388 ProteinModelPortal:O22899
SMR:O22899 PaxDb:O22899 PRIDE:O22899 EnsemblPlants:AT2G47250.1
GeneID:819338 KEGG:ath:AT2G47250 GeneFarm:1798 TAIR:At2g47250
InParanoid:O22899 KO:K12820 OMA:XEIDEAC PhylomeDB:O22899
ProtClustDB:CLSN2683587 Genevestigator:O22899 GermOnline:AT2G47250
Uniprot:O22899
Length = 729
Score = 1549 (550.3 bits), Expect = 5.3e-159, P = 5.3e-159
Identities = 301/542 (55%), Positives = 407/542 (75%)
Query: 269 GKAFTFGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAE 328
GKA++ QR I E+RR LP++ K++ + ++ NQ LIL+GETGSGKTTQ+ Q++ +
Sbjct: 48 GKAYS--QRY-FEILEKRRDLPVWLQKDDFLNTLNSNQTLILVGETGSGKTTQIPQFVLD 104
Query: 329 A---GYTTKGK---IGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVI 382
A + KG+ +GCTQPRRVAA SV++RVA+E +GEEVGY+IRFEDCT T++
Sbjct: 105 AVVADNSDKGRKWLVGCTQPRRVAAMSVSRRVADEMDVSIGEEVGYSIRFEDCTSSRTML 164
Query: 383 KYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSA 442
KY+TDGMLLRE + D L +Y VI+LDEAHERT+ TDVLFGLLK++++ RPDL+L+V SA
Sbjct: 165 KYLTDGMLLREAMADPLLERYKVIILDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSA 224
Query: 443 TLDAERFSGYFFNCNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILL 502
TL+AE+F YF + +PGR PV+I Y+++ DYL++A+ TV+QIH+ EP GDIL+
Sbjct: 225 TLEAEKFQEYFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILV 284
Query: 503 FLTGQEEIDFACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAP-------PG 555
FLTG+EEI+ AC + +++ LG V + V+P+YS LP +Q +IF+PAP P
Sbjct: 285 FLTGEEEIEDACRKINKEVSNLGDQVGPVKVVPLYSTLPPAMQQKIFDPAPVPLTEGGPA 344
Query: 556 GRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRA 615
GRK+VV+TNIAE SLTIDGI YVIDPGFAKQ VYNP+ R++SL+++PIS+ASA QR+GRA
Sbjct: 345 GRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRA 404
Query: 616 GRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSP 675
GRT PGKC+RLYTE ++ +++ P T PEI R NL +T LT+K +GI++L+ FDF+DPP+P
Sbjct: 405 GRTRPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 464
Query: 676 QALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAM 735
+ L+ A+E L LGALD+EG LTK G+ M+EFPLDP +SKML+ S + CS+EIL++ AM
Sbjct: 465 ETLMRALEVLNYLGALDDEGNLTKTGEIMSEFPLDPQMSKMLIVSPEFNCSNEILSVSAM 524
Query: 736 IQTGHIFTRPRERQAKADEKRARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRS 795
+ + F RPRE Q ADE +ARF +GDHLTLL VY A+K N WC ENFVN+R+
Sbjct: 525 LSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPNWCFENFVNNRA 584
Query: 796 LK 797
+K
Sbjct: 585 MK 586
>TAIR|locus:2095989 [details] [associations]
symbol:AT3G62310 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009560 "embryo sac egg
cell differentiation" evidence=RCA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0005730 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL162507 KO:K12820
ProtClustDB:CLSN2683587 OMA:TVLQIHA EMBL:AY120782 EMBL:BT010331
IPI:IPI00540868 PIR:T48023 RefSeq:NP_191790.1 UniGene:At.34140
UniGene:At.4777 ProteinModelPortal:Q9LZQ9 SMR:Q9LZQ9 IntAct:Q9LZQ9
PaxDb:Q9LZQ9 PRIDE:Q9LZQ9 EnsemblPlants:AT3G62310.1 GeneID:825404
KEGG:ath:AT3G62310 TAIR:At3g62310 InParanoid:Q9LZQ9
PhylomeDB:Q9LZQ9 ArrayExpress:Q9LZQ9 Genevestigator:Q9LZQ9
Uniprot:Q9LZQ9
Length = 726
Score = 1548 (550.0 bits), Expect = 6.8e-159, P = 6.8e-159
Identities = 300/537 (55%), Positives = 404/537 (75%)
Query: 274 FGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEA-GYT 332
+ QR I E+RR+LP++ K E ++ +++NQ LIL+GETGSGKTTQ+ Q++ +A
Sbjct: 47 YSQRY-YDILEKRRTLPVWLQKEEFLKTLNNNQTLILVGETGSGKTTQIPQFVIDAVDAE 105
Query: 333 TKGK-----IGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTD 387
T K +GCTQPRRVAA SV++RVAEE +GEEVGY+IRFEDC+ P TV+KY+TD
Sbjct: 106 TSDKRRKWLVGCTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSPRTVLKYLTD 165
Query: 388 GMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAE 447
GMLLRE + D L +Y VI+LDEAHERT+ TDVLFGLLK+++K RPDL+L+V SATL+AE
Sbjct: 166 GMLLREAMADPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAE 225
Query: 448 RFSGYFFNCNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQ 507
+F YF + +PGR PV+I Y+++ DYL++A+ TV+QIH+ EP GDIL+FLTG+
Sbjct: 226 KFQDYFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGE 285
Query: 508 EEIDFACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAP-------PGGRKVV 560
EEI+ AC + +++ LG V + V+P+YS LP +Q +IF+PAP P GRK+V
Sbjct: 286 EEIEDACRKINKEVGNLGDQVGPIKVVPLYSTLPPAMQQKIFDPAPEPVTEGGPPGRKIV 345
Query: 561 VATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGP 620
V+TNIAE SLTIDGI YVIDPGFAKQ VYNP+ R++SL+++PIS+ASA QR+GRAGRT P
Sbjct: 346 VSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRP 405
Query: 621 GKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALIS 680
GKC+RLYTE ++ +++ P T PEI R NL +T LT+K +GI++L+ FDF+DPP+P+ L+
Sbjct: 406 GKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMR 465
Query: 681 AMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGH 740
A+E L LGALD++G LTK G+ M+EFPLDP ++KML+ S + CS+EIL++ AM+ +
Sbjct: 466 ALEVLNYLGALDDDGNLTKTGEIMSEFPLDPQMAKMLIVSPEFNCSNEILSVSAMLSVPN 525
Query: 741 IFTRPRERQAKADEKRARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLK 797
F RPRE Q ADE +ARF EGDHLTLL VY A+K N WC ENF+N+R++K
Sbjct: 526 CFIRPREAQKAADEAKARFGHIEGDHLTLLNVYHAFKQNNEDPNWCYENFINNRAMK 582
>UNIPROTKB|G4N1N4 [details] [associations]
symbol:MGG_07501 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CM001233 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12813 RefSeq:XP_003711413.1
EnsemblFungi:MGG_07501T0 GeneID:2683421 KEGG:mgr:MGG_07501
Uniprot:G4N1N4
Length = 1016
Score = 1526 (542.2 bits), Expect = 1.4e-156, P = 1.4e-156
Identities = 289/526 (54%), Positives = 393/526 (74%)
Query: 276 QRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKG 335
++ +LS+QE R+SLPI+ ++E + A+ Q+L+++GETGSGKTTQL QYL EAGYT G
Sbjct: 360 EKRQLSMQETRKSLPIYVYRDEFLAALEQYQILVIVGETGSGKTTQLPQYLHEAGYTKDG 419
Query: 336 -KIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREI 394
++GCTQPRRVAA SVA RVA+E G ++G EVGY+IRFED T T++KYMTDGMLLRE
Sbjct: 420 MRVGCTQPRRVAAMSVAARVADEMGVKVGNEVGYSIRFEDNTSDKTILKYMTDGMLLREF 479
Query: 395 LIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFF 454
+ + +LS YS +M+DEAHERT++TD+L L+K L + R DL+L+++SAT++AE+F+ YF
Sbjct: 480 MTEPDLSSYSALMIDEAHERTVHTDILLALVKDLARERKDLKLLISSATMNAEKFASYFD 539
Query: 455 NCNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFAC 514
+ IF+IPGR +PVDI Y+ +YL +A+ TV QIH +P+GDIL+FLTGQ+EI+ A
Sbjct: 540 DAPIFNIPGRRYPVDIYYTPAPEANYLSAAITTVFQIHTTQPKGDILIFLTGQDEIEAAE 599
Query: 515 ESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDG 574
+ E + LG V ELV+ P+Y+ LPSE+QS+IFEP P RKVV+ATNIAE SLTIDG
Sbjct: 600 MQITETARKLGSRVKELVICPIYANLPSELQSKIFEPTPENARKVVLATNIAETSLTIDG 659
Query: 575 IFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRS 634
I YVIDPG+ K+NVYNP + +LV+ P S+ASA QR+GRAGR GPGKC+RLYT+ AY +
Sbjct: 660 IVYVIDPGYVKENVYNPATGMSNLVVVPCSRASANQRSGRAGRVGPGKCFRLYTKYAYMN 719
Query: 635 EMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEE 694
EM +T PEIQR NL L +K++GIN LL F+F+DPP +ALI A+ QL++L L+ +
Sbjct: 720 EMEESTTPEIQRTNLNGVVLQLKSLGINELLDFEFMDPPPTEALIGALNQLFALQGLNHK 779
Query: 695 GLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMI-QTGHIFTRPRERQAKAD 753
G LTKLG++MAEFP DP L+K +LA+ GC +E+L+I+AM+ + +F RP+++Q AD
Sbjct: 780 GELTKLGRQMAEFPTDPMLAKAVLAADKEGCVEEVLSIVAMLSEASALFFRPKDKQVHAD 839
Query: 754 EKRARFFQPEG-DHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
R RF EG DH+TLL ++ W ++S W ENF+ RSL +
Sbjct: 840 AARGRFTVKEGGDHVTLLNIWNQWLDSDYSPIWSKENFLQQRSLTR 885
>UNIPROTKB|F1NHI3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
GO:GO:0005689 EMBL:AADN02015408 EMBL:AADN02015409 EMBL:AADN02015410
IPI:IPI00577528 Ensembl:ENSGALT00000023259 Uniprot:F1NHI3
Length = 762
Score = 1470 (522.5 bits), Expect = 8.1e-153, Sum P(2) = 8.1e-153
Identities = 290/525 (55%), Positives = 387/525 (73%)
Query: 282 IQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGK---IG 338
I ++R LP+++ K + +Q +L+GETGSGKTTQ+ Q+ + + G +
Sbjct: 97 ILKKRLQLPVWEYKERFTDILIRHQSFVLVGETGSGKTTQIPQWCVDYMRSLPGPKRGVA 156
Query: 339 CTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDE 398
CTQPRRVAA SVA+RVA+E LG+EVGY+IRFEDC+ T++KYMTDGMLLRE + D
Sbjct: 157 CTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDP 216
Query: 399 NLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNI 458
L +Y VI+LDEAHERT+ TD+L G+LK++V++R DL++IV SATLDA +F YF NC +
Sbjct: 217 LLERYGVIILDEAHERTLATDILMGVLKEVVRQRADLKVIVMSATLDAGKFQIYFDNCPL 276
Query: 459 FSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHV-DEPEGDILLFLTGQEEIDFACESL 517
+IPGRT PV+I Y+ + DYL++A+ TV+QIH+ +E EGD+LLFLTGQEEID AC+ +
Sbjct: 277 LTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRI 336
Query: 518 CEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPP----G--GRKVVVATNIAEASLT 571
+I LG +V ++ ++P+YS LP + Q RIFEP PP G GRKVVV+TNIAE SLT
Sbjct: 337 KREIDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLT 396
Query: 572 IDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESA 631
IDG+ +VIDPGFAKQ VYNP+ R++SL++T IS+ASA QRAGRAGRT PGKC+RLYTE A
Sbjct: 397 IDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKA 456
Query: 632 YRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGAL 691
Y++EM T PEI R NL L +K +GI++L+ FDF+DPP+P+ L+ A+E L L AL
Sbjct: 457 YKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAAL 516
Query: 692 DEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAK 751
+++G LT+LG MAEFPLDP L+KM++AS D CS+E+L+I AM+ F RP E +
Sbjct: 517 NDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKA 576
Query: 752 ADEKRARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSL 796
ADE + RF +GDHLTLL VY A+K + S+ WC +NF+N RSL
Sbjct: 577 ADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSL 621
Score = 42 (19.8 bits), Expect = 8.1e-153, Sum P(2) = 8.1e-153
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 86 SKKKS-GRDRKTNYKAEFENDRER 108
SKK+S G+DR + + DR+R
Sbjct: 16 SKKRSDGKDRDRDRDRDDRKDRDR 39
>POMBASE|SPBC16H5.10c [details] [associations]
symbol:prp43 "ATP-dependent RNA helicase Prp43
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000390
"spliceosomal complex disassembly" evidence=ISO] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISO;ISS] [GO:0005524
"ATP binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=ISO] [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0030686 "90S preribosome"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC16H5.10c GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 GO:GO:0000390 KO:K12820 OMA:TVLQIHA
EMBL:AB027819 PIR:T39615 RefSeq:NP_595937.1
ProteinModelPortal:O42945 IntAct:O42945 STRING:O42945
EnsemblFungi:SPBC16H5.10c.1 GeneID:2540057 KEGG:spo:SPBC16H5.10c
OrthoDB:EOG4S7NZ4 NextBio:20801194 Uniprot:O42945
Length = 735
Score = 1485 (527.8 bits), Expect = 3.2e-152, P = 3.2e-152
Identities = 285/532 (53%), Positives = 391/532 (73%)
Query: 274 FGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLA--EAGY 331
F Q + I E RR LP+++ + E ++ H+NQ+++ +GETGSGKTTQ+ Q++ E +
Sbjct: 61 FSQ-NYFKILETRRELPVYQQREEFLKIYHENQIIVFVGETGSGKTTQIPQFVLYDELPH 119
Query: 332 TTKGKIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLL 391
T +I CTQPRRVAA SVAKRVA+E LGEEVGY IRFEDC+GP+T++KYMTDGMLL
Sbjct: 120 LTNTQIACTQPRRVAAMSVAKRVADEMDVDLGEEVGYNIRFEDCSGPNTLLKYMTDGMLL 179
Query: 392 REILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSG 451
RE + D LS+YS I+LDEAHERT+ TD+L GL+K+L RRPDL++IV SATLDA++F
Sbjct: 180 REAMTDHMLSRYSCIILDEAHERTLATDILMGLMKRLATRRPDLKIIVMSATLDAKKFQK 239
Query: 452 YFFNCNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEID 511
YFF+ + ++PGRT+PV+I Y+++ DYL++AL TVLQIHV+E GDIL+FLTG+EEI+
Sbjct: 240 YFFDAPLLAVPGRTYPVEIYYTQEPERDYLEAALRTVLQIHVEEGPGDILVFLTGEEEIE 299
Query: 512 FACESLCEKIKALGKD--VPELVVLPVYSALPSEIQSRIFEPAPPG-----GRKVVVATN 564
AC + + L ++ L V P+Y +LP Q RIFEP P GRKVV++TN
Sbjct: 300 DACRKITLEADDLVREGAAGPLKVYPLYGSLPPNQQQRIFEPTPEDTKSGYGRKVVISTN 359
Query: 565 IAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCY 624
IAE SLTIDGI YV+DPGF+KQ +YNP+ R++SL+++PIS+ASA QRAGRAGRT PGKC+
Sbjct: 360 IAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCF 419
Query: 625 RLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQ 684
RLYTE A+R E+ T PEI R NL T L +K +GI++L+ FD++DPP+P+ ++ A+E+
Sbjct: 420 RLYTEEAFRKELIEQTYPEILRSNLSSTVLELKKLGIDDLVHFDYMDPPAPETMMRALEE 479
Query: 685 LYSLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTR 744
L L LD+ G LT LG+K +EFPLDP L+ ML+ S + CS+E+L++ A++ ++F R
Sbjct: 480 LNYLNCLDDNGDLTPLGRKASEFPLDPNLAVMLIRSPEFYCSNEVLSLTALLSVPNVFVR 539
Query: 745 PRERQAKADEKRARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSL 796
P + ADE R +F P+GDHLTLL VY A+K+ + WC +F++ R+L
Sbjct: 540 PNSARKLADEMRQQFTHPDGDHLTLLNVYHAYKSGEGTADWCWNHFLSHRAL 591
>UNIPROTKB|F1MVJ1 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0071013 "catalytic
step 2 spliceosome" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OMA:PSRSTWE
IPI:IPI00690755 EMBL:DAAA02046748 EMBL:DAAA02046749
Ensembl:ENSBTAT00000045480 ArrayExpress:F1MVJ1 Uniprot:F1MVJ1
Length = 1226
Score = 1459 (518.7 bits), Expect = 3.5e-152, Sum P(2) = 3.5e-152
Identities = 303/637 (47%), Positives = 419/637 (65%)
Query: 171 PAFLQGQTRVSVDLSPVKVFKNPEGSLSRTAALQSALTKERREVREQQLRTMIDSIPKDL 230
P FL G+ + PV K+ L+ A S ++ RE +E++ K
Sbjct: 414 PPFLDGRIVFTKQPEPVIPVKDATSDLAIIARKGSQTVRKHREQKERK---------KAQ 464
Query: 231 NRPWE-------DPMPETGERHLAQELRGVG-LSARDMPEWKKNAYGKAFTFGQ-RSKLS 281
++ WE D M E + L G + R ++ + K+ + K S
Sbjct: 465 HKHWELAGTKLGDIMGVKKEEEPDKSLTEDGKVDYRTEQKFADHMKKKSEASSEFAKKKS 524
Query: 282 IQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCTQ 341
I EQR+ LPIF ++ EL+ + DN ++I++GETGSGKTTQL QYL E GYT G IGCTQ
Sbjct: 525 ILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQ 584
Query: 342 PRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLS 401
PRRVAA SVAKRV+EE G LGEEVGYAIRFEDCT T+IKYMTDG+LLRE L + +L
Sbjct: 585 PRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLRESLREADLD 644
Query: 402 QYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSI 461
YS I++DEAHER++NTDVLFGLL+++V RR DL+LIVTSAT+DAE+F+ +F N IF I
Sbjct: 645 HYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFASFFGNVPIFHI 704
Query: 462 PGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEKI 521
PGRTFPVDI +S+ DY+++A+ LQ+H+ GDIL+F+ GQE+I+ + + E +
Sbjct: 705 PGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHL 764
Query: 522 KALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDP 581
+ L ++ P L VLP+YS LPS++Q++IF+ AP G RK +VATNIAE SLT+DGI +VID
Sbjct: 765 EEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDS 823
Query: 582 GFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTI 641
G+ K V +P L I I + G +G T P +C RLYT+SAY++E+ TT+
Sbjct: 824 GYCKLKVSSPSLGGSDLKIMEIQKIQKNINTGCSGCTSP-RCCRLYTQSAYKNELLTTTV 882
Query: 642 PEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLTKLG 701
PEIQR NL + L +K++G+ +LL F F+DPP ++++M QL+ LGALD G LT G
Sbjct: 883 PEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTG 942
Query: 702 KKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQ 761
+ M EFPLDP LSKML+ S D+GCS EIL I++M+ IF RP+ R+ ++D+ R +F
Sbjct: 943 RLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREKFAV 1002
Query: 762 PEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
PE DHL+ L VY WK N+S WC ++F+++++++K
Sbjct: 1003 PESDHLSYLNVYLQWKNNNYSTIWCNDHFIHAKAMRK 1039
Score = 47 (21.6 bits), Expect = 3.5e-152, Sum P(2) = 3.5e-152
Identities = 17/54 (31%), Positives = 26/54 (48%)
Query: 81 KPKLQSKK--KSGRDRKTNYKAEFENDRERSGRYCKSNPPMLKDMPVSRMGGVS 132
K ++ S K + +D + + +AE N RSGR + + P S GGVS
Sbjct: 73 KSRISSYKDWEESKDDQRDAEAEDSNQAGRSGRKDRHYRSARVETP-SHPGGVS 125
>FB|FBgn0033160 [details] [associations]
symbol:CG11107 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC;ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0016779 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA EMBL:AY058484 RefSeq:NP_610269.1 UniGene:Dm.4189
SMR:Q7K3M5 STRING:Q7K3M5 EnsemblMetazoa:FBtr0088966 GeneID:35654
KEGG:dme:Dmel_CG11107 UCSC:CG11107-RA FlyBase:FBgn0033160
InParanoid:Q7K3M5 OrthoDB:EOG4D254T GenomeRNAi:35654 NextBio:794560
Uniprot:Q7K3M5
Length = 729
Score = 1483 (527.1 bits), Expect = 5.2e-152, P = 5.2e-152
Identities = 293/533 (54%), Positives = 396/533 (74%)
Query: 274 FGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTT 333
+ QR + ++ ++R +LP+F+ + + ++ + +Q ++L+GETGSGKTTQ+ Q+ + +
Sbjct: 58 YSQRYQ-NLYKKRIALPVFEYQADFMRLLSLHQCIVLVGETGSGKTTQIPQWCVDFA-VS 115
Query: 334 KGKIG--CTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLL 391
KG+ G CTQPRRVAA SVA+RV+EE +LGEEVGY+IRFEDC+ T++KYMTDGMLL
Sbjct: 116 KGRKGVSCTQPRRVAAMSVAQRVSEEMDVKLGEEVGYSIRFEDCSTAKTLLKYMTDGMLL 175
Query: 392 REILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSG 451
RE + D L QY VI+LDEAHERT+ TD+L G+LK+++++R DL+L+V SATLDA +F
Sbjct: 176 REAMSDPMLDQYQVILLDEAHERTLATDILMGVLKEVIRQRSDLKLVVMSATLDAGKFQQ 235
Query: 452 YFFNCNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHV-DEPEGDILLFLTGQEEI 510
YF N + +PGRT PV+I Y+ + DYL++A+ TV+QIH+ +E EGDIL+FLTGQEEI
Sbjct: 236 YFDNAPLMKVPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEIEGDILMFLTGQEEI 295
Query: 511 DFACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPP----G--GRKVVVATN 564
+ AC+ + +I LG ++ EL +P+YS LP +Q RIFEPAPP G GRKVVV+TN
Sbjct: 296 EEACKRIKREIDNLGSEIGELKCIPLYSTLPPNLQQRIFEPAPPPNANGAIGRKVVVSTN 355
Query: 565 IAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCY 624
IAE SLTIDG+ +VIDPGFAKQ VYNP+ R++SL+++PIS+ASA QR+GRAGRT PGKC+
Sbjct: 356 IAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRSGRAGRTRPGKCF 415
Query: 625 RLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQ 684
RLYTE A+++EM T PEI R NL L +K +GI++L+ FDF+DPP+P+ L+ A+E
Sbjct: 416 RLYTEKAFKNEMQDNTYPEILRSNLGTVVLQLKKLGIDDLVHFDFMDPPAPETLMRALEL 475
Query: 685 LYSLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTR 744
L L ALD++G LT LG M+EFPLDP L+KML+AS CS+EIL+I AM+ F R
Sbjct: 476 LNYLAALDDDGNLTDLGAVMSEFPLDPQLAKMLIASCQHNCSNEILSITAMLSVPQCFVR 535
Query: 745 PRERQAKADEKRARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLK 797
P E + ADE + RF +GDHLTLL VY A+K + WC ENF+N RSLK
Sbjct: 536 PNEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQSSEDPNWCYENFINFRSLK 588
>ZFIN|ZDB-GENE-030131-650 [details] [associations]
symbol:dhx15 "DEAH (Asp-Glu-Ala-His) box
polypeptide 15" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-650 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 EMBL:CU651678 IPI:IPI00481686
RefSeq:NP_001108613.1 UniGene:Dr.4024 Ensembl:ENSDART00000081245
GeneID:321931 KEGG:dre:321931 NextBio:20807587 Uniprot:E7F3I8
Length = 769
Score = 1481 (526.4 bits), Expect = 8.5e-152, P = 8.5e-152
Identities = 291/525 (55%), Positives = 388/525 (73%)
Query: 282 IQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGK---IG 338
I ++R LP+++ K ++ +Q +L+GETGSGKTTQ+ Q+ + + G +
Sbjct: 104 ILKKRLQLPVWEYKERFNDILNRHQSFVLVGETGSGKTTQIPQWCVDMVRSLPGPKRGVA 163
Query: 339 CTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDE 398
CTQPRRVAA SVA+RVA+E LG+EVGY+IRFEDC+ T++KYMTDGMLLRE + D
Sbjct: 164 CTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDP 223
Query: 399 NLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNI 458
L +Y VI+LDEAHERT+ TD+L G+LK++V++R DL++IV SATLDA +F YF NC +
Sbjct: 224 LLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQVYFDNCPL 283
Query: 459 FSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHV-DEPEGDILLFLTGQEEIDFACESL 517
+IPGRT PV+I Y+ + DYL++A+ TV+QIH+ +E EGD+LLFLTGQEEID AC+ +
Sbjct: 284 LTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEDEGDVLLFLTGQEEIDEACKRI 343
Query: 518 CEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPP----G--GRKVVVATNIAEASLT 571
+I LG DV ++ ++P+YS LP + Q RIFEP PP G GRKVVV+TNIAE SLT
Sbjct: 344 KREIDDLGPDVGDIKIIPLYSTLPPQQQQRIFEPPPPRKPNGAIGRKVVVSTNIAETSLT 403
Query: 572 IDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESA 631
IDG+ +VIDPGFAKQ VYNP+ R++SL++T IS+ASA QRAGRAGRT PGKC+RLYTE A
Sbjct: 404 IDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKA 463
Query: 632 YRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGAL 691
Y++EM T PEI R NL L +K +GI++L+ FDF+DPP+P+ L+ A+E L L AL
Sbjct: 464 YKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAAL 523
Query: 692 DEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAK 751
+++G LT+LG MAEFPLDP L+KM++AS D CS+E+L+I AM+ F RP E +
Sbjct: 524 NDDGDLTELGSMMAEFPLDPQLAKMVIASCDFNCSNEVLSITAMLSVPQCFVRPTEAKKA 583
Query: 752 ADEKRARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSL 796
ADE + RF +GDHLTLL VY A+K + S+ WC +NF+N RSL
Sbjct: 584 ADESKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSL 628
>UNIPROTKB|A5D7D9 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
GeneTree:ENSGT00650000093246 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689
EMBL:DAAA02017121 EMBL:BC140520 IPI:IPI00709068
RefSeq:NP_001091487.1 UniGene:Bt.58909 Ensembl:ENSBTAT00000011714
GeneID:512327 KEGG:bta:512327 InParanoid:A5D7D9 NextBio:20870343
Uniprot:A5D7D9
Length = 795
Score = 1473 (523.6 bits), Expect = 6.0e-151, P = 6.0e-151
Identities = 290/525 (55%), Positives = 388/525 (73%)
Query: 282 IQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGK---IG 338
I ++R LP+++ K+ + +Q +L+GETGSGKTTQ+ Q+ E + G +
Sbjct: 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVA 189
Query: 339 CTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDE 398
CTQPRRVAA SVA+RVA+E LG+EVGY+IRFEDC+ T++KYMTDGMLLRE + D
Sbjct: 190 CTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDP 249
Query: 399 NLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNI 458
L +Y VI+LDEAHERT+ TD+L G+LK++V++R DL++IV SATLDA +F YF NC +
Sbjct: 250 LLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPL 309
Query: 459 FSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHV-DEPEGDILLFLTGQEEIDFACESL 517
+IPGRT PV+I Y+ + DYL++A+ TV+QIH+ +E EGD+LLFLTGQEEID AC+ +
Sbjct: 310 LTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRI 369
Query: 518 CEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPP----G--GRKVVVATNIAEASLT 571
++ LG +V ++ ++P+YS LP + Q RIFEP PP G GRKVVV+TNIAE SLT
Sbjct: 370 KREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLT 429
Query: 572 IDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESA 631
IDG+ +VIDPGFAKQ VYNP+ R++SL++T IS+ASA QRAGRAGRT PGKC+RLYTE A
Sbjct: 430 IDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKA 489
Query: 632 YRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGAL 691
Y++EM T PEI R NL L +K +GI++L+ FDF+DPP+P+ L+ A+E L L AL
Sbjct: 490 YKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAAL 549
Query: 692 DEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAK 751
+++G LT+LG MAEFPLDP L+KM++AS D CS+E+L+I AM+ F RP E +
Sbjct: 550 NDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKA 609
Query: 752 ADEKRARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSL 796
ADE + RF +GDHLTLL VY A+K + S+ WC +NF+N RSL
Sbjct: 610 ADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSL 654
>UNIPROTKB|E2R2U3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
CTD:1665 GO:GO:0005689 EMBL:AAEX03002593 EMBL:AAEX03002594
RefSeq:XP_851535.1 Ensembl:ENSCAFT00000026155 GeneID:488856
KEGG:cfa:488856 NextBio:20862139 Uniprot:E2R2U3
Length = 795
Score = 1473 (523.6 bits), Expect = 6.0e-151, P = 6.0e-151
Identities = 290/525 (55%), Positives = 388/525 (73%)
Query: 282 IQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGK---IG 338
I ++R LP+++ K+ + +Q +L+GETGSGKTTQ+ Q+ E + G +
Sbjct: 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVA 189
Query: 339 CTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDE 398
CTQPRRVAA SVA+RVA+E LG+EVGY+IRFEDC+ T++KYMTDGMLLRE + D
Sbjct: 190 CTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDP 249
Query: 399 NLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNI 458
L +Y VI+LDEAHERT+ TD+L G+LK++V++R DL++IV SATLDA +F YF NC +
Sbjct: 250 LLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPL 309
Query: 459 FSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHV-DEPEGDILLFLTGQEEIDFACESL 517
+IPGRT PV+I Y+ + DYL++A+ TV+QIH+ +E EGD+LLFLTGQEEID AC+ +
Sbjct: 310 LTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRI 369
Query: 518 CEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPP----G--GRKVVVATNIAEASLT 571
++ LG +V ++ ++P+YS LP + Q RIFEP PP G GRKVVV+TNIAE SLT
Sbjct: 370 KREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLT 429
Query: 572 IDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESA 631
IDG+ +VIDPGFAKQ VYNP+ R++SL++T IS+ASA QRAGRAGRT PGKC+RLYTE A
Sbjct: 430 IDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKA 489
Query: 632 YRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGAL 691
Y++EM T PEI R NL L +K +GI++L+ FDF+DPP+P+ L+ A+E L L AL
Sbjct: 490 YKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAAL 549
Query: 692 DEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAK 751
+++G LT+LG MAEFPLDP L+KM++AS D CS+E+L+I AM+ F RP E +
Sbjct: 550 NDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKA 609
Query: 752 ADEKRARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSL 796
ADE + RF +GDHLTLL VY A+K + S+ WC +NF+N RSL
Sbjct: 610 ADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSL 654
>UNIPROTKB|O43143 [details] [associations]
symbol:DHX15 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX15" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0008380 "RNA splicing" evidence=IC]
[GO:0005689 "U12-type spliceosomal complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 EMBL:AB001636 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0003724
KO:K12820 OMA:TVLQIHA EMBL:AF279891 EMBL:BC035974 IPI:IPI00396435
PIR:JC5785 RefSeq:NP_001349.2 UniGene:Hs.696074
ProteinModelPortal:O43143 SMR:O43143 DIP:DIP-38211N IntAct:O43143
MINT:MINT-5003827 STRING:O43143 PhosphoSite:O43143
SWISS-2DPAGE:O43143 PaxDb:O43143 PRIDE:O43143
Ensembl:ENST00000336812 GeneID:1665 KEGG:hsa:1665 UCSC:uc003gqx.3
CTD:1665 GeneCards:GC04M024519 HGNC:HGNC:2738 HPA:HPA047047
MIM:603403 neXtProt:NX_O43143 PharmGKB:PA27204 HOVERGEN:HBG039428
InParanoid:O43143 OrthoDB:EOG4K6G3N GenomeRNAi:1665 NextBio:6852
ArrayExpress:O43143 Bgee:O43143 CleanEx:HS_DHX15
Genevestigator:O43143 GermOnline:ENSG00000109606 GO:GO:0005689
Uniprot:O43143
Length = 795
Score = 1473 (523.6 bits), Expect = 6.0e-151, P = 6.0e-151
Identities = 290/525 (55%), Positives = 388/525 (73%)
Query: 282 IQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGK---IG 338
I ++R LP+++ K+ + +Q +L+GETGSGKTTQ+ Q+ E + G +
Sbjct: 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVA 189
Query: 339 CTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDE 398
CTQPRRVAA SVA+RVA+E LG+EVGY+IRFEDC+ T++KYMTDGMLLRE + D
Sbjct: 190 CTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDP 249
Query: 399 NLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNI 458
L +Y VI+LDEAHERT+ TD+L G+LK++V++R DL++IV SATLDA +F YF NC +
Sbjct: 250 LLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPL 309
Query: 459 FSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHV-DEPEGDILLFLTGQEEIDFACESL 517
+IPGRT PV+I Y+ + DYL++A+ TV+QIH+ +E EGD+LLFLTGQEEID AC+ +
Sbjct: 310 LTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRI 369
Query: 518 CEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPP----G--GRKVVVATNIAEASLT 571
++ LG +V ++ ++P+YS LP + Q RIFEP PP G GRKVVV+TNIAE SLT
Sbjct: 370 KREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLT 429
Query: 572 IDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESA 631
IDG+ +VIDPGFAKQ VYNP+ R++SL++T IS+ASA QRAGRAGRT PGKC+RLYTE A
Sbjct: 430 IDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKA 489
Query: 632 YRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGAL 691
Y++EM T PEI R NL L +K +GI++L+ FDF+DPP+P+ L+ A+E L L AL
Sbjct: 490 YKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAAL 549
Query: 692 DEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAK 751
+++G LT+LG MAEFPLDP L+KM++AS D CS+E+L+I AM+ F RP E +
Sbjct: 550 NDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKA 609
Query: 752 ADEKRARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSL 796
ADE + RF +GDHLTLL VY A+K + S+ WC +NF+N RSL
Sbjct: 610 ADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSL 654
>UNIPROTKB|F1S5A8 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00650000093246 OMA:TVLQIHA GO:GO:0005689
EMBL:CU633303 Ensembl:ENSSSCT00000009580 Uniprot:F1S5A8
Length = 795
Score = 1473 (523.6 bits), Expect = 6.0e-151, P = 6.0e-151
Identities = 290/525 (55%), Positives = 388/525 (73%)
Query: 282 IQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGK---IG 338
I ++R LP+++ K+ + +Q +L+GETGSGKTTQ+ Q+ E + G +
Sbjct: 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVA 189
Query: 339 CTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDE 398
CTQPRRVAA SVA+RVA+E LG+EVGY+IRFEDC+ T++KYMTDGMLLRE + D
Sbjct: 190 CTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDP 249
Query: 399 NLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNI 458
L +Y VI+LDEAHERT+ TD+L G+LK++V++R DL++IV SATLDA +F YF NC +
Sbjct: 250 LLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPL 309
Query: 459 FSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHV-DEPEGDILLFLTGQEEIDFACESL 517
+IPGRT PV+I Y+ + DYL++A+ TV+QIH+ +E EGD+LLFLTGQEEID AC+ +
Sbjct: 310 LTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRI 369
Query: 518 CEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPP----G--GRKVVVATNIAEASLT 571
++ LG +V ++ ++P+YS LP + Q RIFEP PP G GRKVVV+TNIAE SLT
Sbjct: 370 KREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLT 429
Query: 572 IDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESA 631
IDG+ +VIDPGFAKQ VYNP+ R++SL++T IS+ASA QRAGRAGRT PGKC+RLYTE A
Sbjct: 430 IDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKA 489
Query: 632 YRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGAL 691
Y++EM T PEI R NL L +K +GI++L+ FDF+DPP+P+ L+ A+E L L AL
Sbjct: 490 YKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAAL 549
Query: 692 DEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAK 751
+++G LT+LG MAEFPLDP L+KM++AS D CS+E+L+I AM+ F RP E +
Sbjct: 550 NDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKA 609
Query: 752 ADEKRARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSL 796
ADE + RF +GDHLTLL VY A+K + S+ WC +NF+N RSL
Sbjct: 610 ADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSL 654
>MGI|MGI:1099786 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005689 "U12-type spliceosomal complex" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
MGI:MGI:1099786 GO:GO:0005524 GO:GO:0005730 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:AF017153
EMBL:BC003745 IPI:IPI00128818 RefSeq:NP_031865.2 UniGene:Mm.993
ProteinModelPortal:O35286 SMR:O35286 STRING:O35286
PhosphoSite:O35286 PaxDb:O35286 PRIDE:O35286
Ensembl:ENSMUST00000031061 GeneID:13204 KEGG:mmu:13204
InParanoid:O35286 NextBio:283358 Bgee:O35286 CleanEx:MM_DHX15
Genevestigator:O35286 GermOnline:ENSMUSG00000029169 Uniprot:O35286
Length = 795
Score = 1473 (523.6 bits), Expect = 6.0e-151, P = 6.0e-151
Identities = 290/525 (55%), Positives = 388/525 (73%)
Query: 282 IQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGK---IG 338
I ++R LP+++ K+ + +Q +L+GETGSGKTTQ+ Q+ E + G +
Sbjct: 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVA 189
Query: 339 CTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDE 398
CTQPRRVAA SVA+RVA+E LG+EVGY+IRFEDC+ T++KYMTDGMLLRE + D
Sbjct: 190 CTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDP 249
Query: 399 NLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNI 458
L +Y VI+LDEAHERT+ TD+L G+LK++V++R DL++IV SATLDA +F YF NC +
Sbjct: 250 LLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPL 309
Query: 459 FSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHV-DEPEGDILLFLTGQEEIDFACESL 517
+IPGRT PV+I Y+ + DYL++A+ TV+QIH+ +E EGD+LLFLTGQEEID AC+ +
Sbjct: 310 LTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRI 369
Query: 518 CEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPP----G--GRKVVVATNIAEASLT 571
++ LG +V ++ ++P+YS LP + Q RIFEP PP G GRKVVV+TNIAE SLT
Sbjct: 370 KREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLT 429
Query: 572 IDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESA 631
IDG+ +VIDPGFAKQ VYNP+ R++SL++T IS+ASA QRAGRAGRT PGKC+RLYTE A
Sbjct: 430 IDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKA 489
Query: 632 YRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGAL 691
Y++EM T PEI R NL L +K +GI++L+ FDF+DPP+P+ L+ A+E L L AL
Sbjct: 490 YKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAAL 549
Query: 692 DEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAK 751
+++G LT+LG MAEFPLDP L+KM++AS D CS+E+L+I AM+ F RP E +
Sbjct: 550 NDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKA 609
Query: 752 ADEKRARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSL 796
ADE + RF +GDHLTLL VY A+K + S+ WC +NF+N RSL
Sbjct: 610 ADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSL 654
>RGD|1308072 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005689 "U12-type
spliceosomal complex" evidence=IEA;ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 RGD:1308072 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:CH473963
IPI:IPI00361832 RefSeq:NP_001178526.1 UniGene:Rn.55597
Ensembl:ENSRNOT00000005126 GeneID:289693 KEGG:rno:289693
NextBio:630162 Uniprot:D3ZD97
Length = 795
Score = 1473 (523.6 bits), Expect = 6.0e-151, P = 6.0e-151
Identities = 290/525 (55%), Positives = 388/525 (73%)
Query: 282 IQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGK---IG 338
I ++R LP+++ K+ + +Q +L+GETGSGKTTQ+ Q+ E + G +
Sbjct: 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVA 189
Query: 339 CTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDE 398
CTQPRRVAA SVA+RVA+E LG+EVGY+IRFEDC+ T++KYMTDGMLLRE + D
Sbjct: 190 CTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDP 249
Query: 399 NLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNI 458
L +Y VI+LDEAHERT+ TD+L G+LK++V++R DL++IV SATLDA +F YF NC +
Sbjct: 250 LLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPL 309
Query: 459 FSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHV-DEPEGDILLFLTGQEEIDFACESL 517
+IPGRT PV+I Y+ + DYL++A+ TV+QIH+ +E EGD+LLFLTGQEEID AC+ +
Sbjct: 310 LTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRI 369
Query: 518 CEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPP----G--GRKVVVATNIAEASLT 571
++ LG +V ++ ++P+YS LP + Q RIFEP PP G GRKVVV+TNIAE SLT
Sbjct: 370 KREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLT 429
Query: 572 IDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESA 631
IDG+ +VIDPGFAKQ VYNP+ R++SL++T IS+ASA QRAGRAGRT PGKC+RLYTE A
Sbjct: 430 IDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKA 489
Query: 632 YRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGAL 691
Y++EM T PEI R NL L +K +GI++L+ FDF+DPP+P+ L+ A+E L L AL
Sbjct: 490 YKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAAL 549
Query: 692 DEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAK 751
+++G LT+LG MAEFPLDP L+KM++AS D CS+E+L+I AM+ F RP E +
Sbjct: 550 NDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKA 609
Query: 752 ADEKRARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSL 796
ADE + RF +GDHLTLL VY A+K + S+ WC +NF+N RSL
Sbjct: 610 ADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSL 654
>WB|WBGene00018967 [details] [associations]
symbol:F56D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0040022 "feminization of
hermaphroditic germ-line" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 1444 (513.4 bits), Expect = 7.1e-148, P = 7.1e-148
Identities = 284/532 (53%), Positives = 383/532 (71%)
Query: 281 SIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAE-AGYTTKGK--- 336
+I E+R LP+++ K + ++ + +NQ + L+GETGSGKTTQ+ Q+ E +G+
Sbjct: 68 AIWEKRSQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWAVEFMKQQQQGQPPG 127
Query: 337 ----IGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLR 392
+ CTQPRRVAA SVA RVAEE LG+EVGY+IRFEDC TV+KY TDGMLLR
Sbjct: 128 QARLVACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISERTVLKYCTDGMLLR 187
Query: 393 EILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGY 452
E + L +Y V++LDEAHERT+ TD+L GL+K++V+ R D+++++ SATLDA +F Y
Sbjct: 188 EAMNSPLLDKYKVLILDEAHERTLATDILMGLIKEIVRNRADIKVVIMSATLDAGKFQRY 247
Query: 453 FFNCNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIH-VDEPEGDILLFLTGQEEID 511
F +C + S+PGRTFPV+I ++ DYL++A+ TV+QIH V+E EGDILLFLTGQEEI+
Sbjct: 248 FEDCPLLSVPGRTFPVEIFFTPNAEKDYLEAAIRTVIQIHMVEEVEGDILLFLTGQEEIE 307
Query: 512 FACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPG------GRKVVVATNI 565
AC+ + +I+ALG D L +P+YS LP Q RIFEPAPP RK V++TNI
Sbjct: 308 EACKRIDREIQALGADAGALSCIPLYSTLPPAAQQRIFEPAPPNRPNGAISRKCVISTNI 367
Query: 566 AEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYR 625
AE SLTIDG+ +VIDPGF+KQ VYNP+ R++SL++ PIS+ASA+QRAGRAGRT PGKC+R
Sbjct: 368 AETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAMQRAGRAGRTKPGKCFR 427
Query: 626 LYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQL 685
LYTE+AY SEM T PEI R NL L +K +G +L+ FDF+DPP+P+ L+ A+E L
Sbjct: 428 LYTETAYGSEMQDQTYPEILRSNLGSVVLQLKKLGTEDLVHFDFMDPPAPETLMRALELL 487
Query: 686 YSLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRP 745
L A++++G LT+LG MAEFPLDP L+KML+ S +L CS+EIL+I AM+ + RP
Sbjct: 488 NYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTELNCSNEILSITAMLSVPQCWVRP 547
Query: 746 RERQAKADEKRARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLK 797
E + +ADE +ARF +GDHLTLL VY ++K WC +NF+N R++K
Sbjct: 548 NEMRTEADEAKARFAHIDGDHLTLLNVYHSFKQNQEDPQWCYDNFINYRTMK 599
>UNIPROTKB|Q20875 [details] [associations]
symbol:F56D2.6 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase F56D2.6" species:6239 "Caenorhabditis
elegans" [GO:0030686 "90S preribosome" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0006364 "rRNA processing"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 1444 (513.4 bits), Expect = 7.1e-148, P = 7.1e-148
Identities = 284/532 (53%), Positives = 383/532 (71%)
Query: 281 SIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAE-AGYTTKGK--- 336
+I E+R LP+++ K + ++ + +NQ + L+GETGSGKTTQ+ Q+ E +G+
Sbjct: 68 AIWEKRSQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWAVEFMKQQQQGQPPG 127
Query: 337 ----IGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLR 392
+ CTQPRRVAA SVA RVAEE LG+EVGY+IRFEDC TV+KY TDGMLLR
Sbjct: 128 QARLVACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISERTVLKYCTDGMLLR 187
Query: 393 EILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGY 452
E + L +Y V++LDEAHERT+ TD+L GL+K++V+ R D+++++ SATLDA +F Y
Sbjct: 188 EAMNSPLLDKYKVLILDEAHERTLATDILMGLIKEIVRNRADIKVVIMSATLDAGKFQRY 247
Query: 453 FFNCNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIH-VDEPEGDILLFLTGQEEID 511
F +C + S+PGRTFPV+I ++ DYL++A+ TV+QIH V+E EGDILLFLTGQEEI+
Sbjct: 248 FEDCPLLSVPGRTFPVEIFFTPNAEKDYLEAAIRTVIQIHMVEEVEGDILLFLTGQEEIE 307
Query: 512 FACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPG------GRKVVVATNI 565
AC+ + +I+ALG D L +P+YS LP Q RIFEPAPP RK V++TNI
Sbjct: 308 EACKRIDREIQALGADAGALSCIPLYSTLPPAAQQRIFEPAPPNRPNGAISRKCVISTNI 367
Query: 566 AEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYR 625
AE SLTIDG+ +VIDPGF+KQ VYNP+ R++SL++ PIS+ASA+QRAGRAGRT PGKC+R
Sbjct: 368 AETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAMQRAGRAGRTKPGKCFR 427
Query: 626 LYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQL 685
LYTE+AY SEM T PEI R NL L +K +G +L+ FDF+DPP+P+ L+ A+E L
Sbjct: 428 LYTETAYGSEMQDQTYPEILRSNLGSVVLQLKKLGTEDLVHFDFMDPPAPETLMRALELL 487
Query: 686 YSLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRP 745
L A++++G LT+LG MAEFPLDP L+KML+ S +L CS+EIL+I AM+ + RP
Sbjct: 488 NYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTELNCSNEILSITAMLSVPQCWVRP 547
Query: 746 RERQAKADEKRARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLK 797
E + +ADE +ARF +GDHLTLL VY ++K WC +NF+N R++K
Sbjct: 548 NEMRTEADEAKARFAHIDGDHLTLLNVYHSFKQNQEDPQWCYDNFINYRTMK 599
>SGD|S000003088 [details] [associations]
symbol:PRP43 "RNA helicase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IMP;IDA] [GO:0000390 "spliceosomal
complex disassembly" evidence=IGI;IDA] [GO:0030490 "maturation of
SSU-rRNA" evidence=IGI] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0071014 "post-mRNA
release spliceosomal complex" evidence=IMP] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0042273 "ribosomal large subunit biogenesis" evidence=IMP]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000003088
GO:GO:0005739 GO:GO:0005524 EMBL:BK006941 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0000463
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0000390 GO:GO:0000466
GO:GO:0000462 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
OrthoDB:EOG4S7NZ4 GO:GO:0071014 EMBL:U41851 EMBL:Z72642 PIR:S64130
RefSeq:NP_011395.1 PDB:2XAU PDB:3KX2 PDBsum:2XAU PDBsum:3KX2
ProteinModelPortal:P53131 SMR:P53131 DIP:DIP-5152N IntAct:P53131
MINT:MINT-497996 STRING:P53131 PaxDb:P53131 PeptideAtlas:P53131
PRIDE:P53131 EnsemblFungi:YGL120C GeneID:852757 KEGG:sce:YGL120C
CYGD:YGL120c EvolutionaryTrace:P53131 NextBio:972201
Genevestigator:P53131 GermOnline:YGL120C Uniprot:P53131
Length = 767
Score = 1437 (510.9 bits), Expect = 3.9e-147, P = 3.9e-147
Identities = 293/596 (49%), Positives = 412/596 (69%)
Query: 217 QQLRTMIDSIPKDLNRPWEDPMP--ETGERHLAQELRGVGLSARDMPEWKKNAY-GKAFT 273
+Q + + + K P E+P+ + GE Q A+ + + K N + G+ FT
Sbjct: 21 EQAAEIAEELSKQHPLPSEEPLVHHDAGEFKGLQRHHTSAEEAQKLEDGKINPFTGREFT 80
Query: 274 FGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLA--EAGY 331
+ I + RR LP+ ++E ++ +NQ+++ +GETGSGKTTQ+ Q++ E +
Sbjct: 81 ---PKYVDILKIRRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPH 137
Query: 332 TTKGKIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLL 391
++ CTQPRRVAA SVA+RVAEE +LGEEVGY+IRFE+ T T++KYMTDGMLL
Sbjct: 138 LENTQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLL 197
Query: 392 REILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSG 451
RE + D +LS+YS I+LDEAHERT+ TD+L GLLKQ+VKRRPDL++I+ SATLDAE+F
Sbjct: 198 REAMEDHDLSRYSCIILDEAHERTLATDILMGLLKQVVKRRPDLKIIIMSATLDAEKFQR 257
Query: 452 YFFNCNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEID 511
YF + + ++PGRT+PV++ Y+ + DYLDSA+ TVLQIH E GDILLFLTG++EI+
Sbjct: 258 YFNDAPLLAVPGRTYPVELYYTPEFQRDYLDSAIRTVLQIHATEEAGDILLFLTGEDEIE 317
Query: 512 FACESLCEKIKALGKD--VPELVVLPVYSALPSEIQSRIFEPAPPG-----GRKVVVATN 564
A + + L ++ L V P+Y +LP Q RIFEPAP GRKVV++TN
Sbjct: 318 DAVRKISLEGDQLVREEGCGPLSVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVVISTN 377
Query: 565 IAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCY 624
IAE SLTIDGI YV+DPGF+KQ VYNP+ R++SL+++PIS+ASA QRAGRAGRT PGKC+
Sbjct: 378 IAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCF 437
Query: 625 RLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQ 684
RLYTE A++ E+ + PEI R NL T L +K +GI++L+ FDF+DPP+P+ ++ A+E+
Sbjct: 438 RLYTEEAFQKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEE 497
Query: 685 LYSLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTR 744
L L LD+EG LT LG+ ++FPLDP L+ ML+ S + CS EILTI+AM+ ++F R
Sbjct: 498 LNYLACLDDEGNLTPLGRLASQFPLDPMLAVMLIGSFEFQCSQEILTIVAMLSVPNVFIR 557
Query: 745 PRERQAKADEKRARFFQPEGDHLTLLAVYEAWK---AKNFSL-PWCGENFVNSRSL 796
P + + +AD+ + F P+GDH+TLL VY A+K A + + WC ++++N RSL
Sbjct: 558 PTKDKKRADDAKNIFAHPDGDHITLLNVYHAFKSDEAYEYGIHKWCRDHYLNYRSL 613
>ASPGD|ASPL0000059403 [details] [associations]
symbol:AN0133 species:162425 "Emericella nidulans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000004 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
OMA:TVLQIHA OrthoDB:EOG4S7NZ4 RefSeq:XP_657737.1 STRING:Q5BH47
EnsemblFungi:CADANIAT00002613 GeneID:2875910 KEGG:ani:AN0133.2
Uniprot:Q5BH47
Length = 769
Score = 1426 (507.0 bits), Expect = 5.7e-146, P = 5.7e-146
Identities = 285/531 (53%), Positives = 386/531 (72%)
Query: 281 SIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQY--LAEAGYTTKGKIG 338
SI + RR LP+ ++E +Q +Q+L+ +GETGSGKTTQ+ Q+ L + T + I
Sbjct: 91 SILKTRRDLPVHAQRDEFLQLYQQSQILVFVGETGSGKTTQIPQFVLLDDLPQTQRKMIA 150
Query: 339 CTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDE 398
CTQPRRVAA SVA+RVA E LGEEVGY+IRFED T P T++KYMTDGMLLRE + D
Sbjct: 151 CTQPRRVAAMSVAQRVAAELDVTLGEEVGYSIRFEDMTSPKTLLKYMTDGMLLREAMNDH 210
Query: 399 NLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNI 458
LS+YS I+LDEAHERT++TDVL GLLK++V+RRPDL++I+ SATLDA++F YF + +
Sbjct: 211 ELSRYSTIILDEAHERTMSTDVLMGLLKEVVQRRPDLKIIIMSATLDAQKFQRYFNDAPL 270
Query: 459 FSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLC 518
++PGRT PV+I Y+ + DY+++A+ TVLQIH E EGDILLFLTG+EEI+ A +
Sbjct: 271 LAVPGRTHPVEIFYTPEPEQDYVEAAIRTVLQIHATEDEGDILLFLTGEEEIEDAARKIS 330
Query: 519 -EKIKALGK-DVPELVVLPVYSALPSEIQSRIFEPAPP----GGR---KVVVATNIAEAS 569
E + + + D L V +Y +LP +Q RIFEPAPP GGR KV+V+TNIAE S
Sbjct: 331 LEGDEMIREADAGPLKVYTLYGSLPPHMQQRIFEPAPPPRRPGGRPGRKVIVSTNIAETS 390
Query: 570 LTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTE 629
LTIDGI YV+DPGF+KQ +YNP+ R++SL+++PIS+ASA QRAGRAGRT PGKC+RLYTE
Sbjct: 391 LTIDGIVYVVDPGFSKQKIYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTE 450
Query: 630 SAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLG 689
SA++ E+ T PEI R NL T L +K +GI++L+ FD +DPP+P+ L+ A+E+L L
Sbjct: 451 SAFKKELIDQTYPEILRSNLSSTVLELKKLGIDDLVHFDLMDPPAPETLMRALEELNYLA 510
Query: 690 ALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQ 749
LD++G LT LG+ +EFPLDP L+ ML++S + CS+EIL+I A++ IF RP ++
Sbjct: 511 CLDDDGNLTPLGRLASEFPLDPALAVMLISSPEFYCSNEILSITALLSVPQIFVRPASQR 570
Query: 750 AKADEKRARFFQPEGDHLTLLAVYEAWK---AKNFSLPWCGENFVNSRSLK 797
+ADE + F P+GDHLTLL Y A+K A+ WC ++F++ RSL+
Sbjct: 571 KRADEMKNLFAHPDGDHLTLLNAYHAFKSPEAQENPKQWCHDHFLSLRSLQ 621
>DICTYBASE|DDB_G0285213 [details] [associations]
symbol:dhx15 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA;ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285213 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
GO:GO:0003676 EMBL:AAFI02000076 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12820 OMA:TVLQIHA RefSeq:XP_638323.1
ProteinModelPortal:Q54NJ4 EnsemblProtists:DDB0233403 GeneID:8624993
KEGG:ddi:DDB_G0285213 Uniprot:Q54NJ4
Length = 727
Score = 1426 (507.0 bits), Expect = 5.7e-146, P = 5.7e-146
Identities = 282/531 (53%), Positives = 383/531 (72%)
Query: 270 KAFTFGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEA 329
K TF +R I E+R+ LP++K K + I+ + +NQV+IL+GETGSGKTTQ+ Q++ +A
Sbjct: 59 KKETFSKRY-YEILEKRKELPVWKQKEDFIKVIKENQVVILVGETGSGKTTQIPQFVVDA 117
Query: 330 GYTTKGK-IGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDG 388
G GK +G TQPRRVAA SVAKRV+EE LGEEVGY+IRFE+ + T +KY+TDG
Sbjct: 118 GLIRPGKMVGVTQPRRVAAISVAKRVSEEMDFELGEEVGYSIRFEELSSARTFMKYLTDG 177
Query: 389 MLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAER 448
MLLRE + D L++Y VI+LDEAHERT++TD+LFGL+K ++KRR DL+LIV SATL+A +
Sbjct: 178 MLLRESMSDPTLNKYDVIILDEAHERTLSTDILFGLIKDILKRRKDLKLIVMSATLEAGK 237
Query: 449 FSGYFFNCNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQE 508
F YF N + +PGR PV+I Y+ + DYL+SA+ TV+ IH +E GDIL+FLTG+E
Sbjct: 238 FQKYFENAPLIKVPGRLHPVEIFYTEEAAKDYLESAVRTVIDIHTNEGTGDILVFLTGEE 297
Query: 509 EIDFACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEA 568
EI+ C + + + G +P + LP+YS+LP QS+IF+ RK +V+TNIAE
Sbjct: 298 EIEDTCAKIQRETRERG--LPPMKTLPLYSSLPIYQQSKIFDTCKE--RKCIVSTNIAET 353
Query: 569 SLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYT 628
SLTIDGI +V+DPGF+KQ YNP+ R++SL++ PIS+ASA QRAGRAGRT PGKC+RLYT
Sbjct: 354 SLTIDGIVFVVDPGFSKQKTYNPRSRVESLLVAPISKASANQRAGRAGRTRPGKCFRLYT 413
Query: 629 ESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSL 688
E A++ M T PEI R NL L + +G+ +L+ FDF+DPP P LI A+E L+ L
Sbjct: 414 EKAFKELMIQQTHPEILRSNLASVVLQLLKLGVVDLVHFDFMDPPVPDTLIRALEVLHYL 473
Query: 689 GALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRER 748
GALD+EG LT++G M+EFPLDP LSKML+ S + CS+EILTI AM+ + F RP++
Sbjct: 474 GALDDEGQLTEIGSIMSEFPLDPQLSKMLIVSAERSCSNEILTIAAMLSAPNCFMRPKDN 533
Query: 749 QAKADEKRARFFQPEGDHLTLLAVYEAWKAKNFSLP-WCGENFVNSRSLKK 798
+ +AD + F +GDHLT+L VY ++K KN P WC +NF+N R++K+
Sbjct: 534 RIEADSAKKSFDHFDGDHLTMLNVYHSFK-KNGEDPTWCYDNFLNHRAIKQ 583
>CGD|CAL0000153 [details] [associations]
symbol:orf19.1687 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0000153 GO:GO:0005524 GO:GO:0003676 EMBL:AACQ01000014
EMBL:AACQ01000013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12820 RefSeq:XP_721644.1
RefSeq:XP_721764.1 STRING:Q5AJA5 GeneID:3636669 GeneID:3636709
KEGG:cal:CaO19.1687 KEGG:cal:CaO19.9255 Uniprot:Q5AJA5
Length = 767
Score = 1423 (506.0 bits), Expect = 1.2e-145, P = 1.2e-145
Identities = 287/556 (51%), Positives = 390/556 (70%)
Query: 257 ARDMPEWKKNAY-GKAFTFGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETG 315
A+ + + KN + G FT I + RR LP+ + E ++ H Q+++ +GETG
Sbjct: 64 AQKLEDGPKNPFTGHDFT---TKYFDILKTRRDLPVHAQREEFLKIFHSTQIMVFVGETG 120
Query: 316 SGKTTQLAQYLA--EAGYTTKGKIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFE 373
SGKTTQ+ Q++ E + T ++ CTQPRRVAA SVA RVA+E LGEEVGY IRFE
Sbjct: 121 SGKTTQIPQFVLYDEMPHLTGKQVACTQPRRVAAMSVAARVADEMDVELGEEVGYNIRFE 180
Query: 374 DCTGPDTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRP 433
+ +GP T++KYMTDGMLLRE + D +L++YS I+LDEAHERT+ TD+L GLLKQ+ RRP
Sbjct: 181 NNSGPKTILKYMTDGMLLREAMEDHDLTRYSCIILDEAHERTLATDILMGLLKQVSVRRP 240
Query: 434 DLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHV 493
DL++I+ SATLDAE+F YF N + ++PGRT PV+I Y+ + DYLD+A+ TVLQIH
Sbjct: 241 DLKIIIMSATLDAEKFQNYFNNAPLLAVPGRTHPVEIYYTPEFQRDYLDAAIRTVLQIHA 300
Query: 494 DEPEGDILLFLTGQEEIDFACESLCEKIKALGKD--VPELVVLPVYSALPSEIQSRIFEP 551
E EGDILLFLTG+EEI+ AC + + L ++ L V P+Y +LP Q +IFEP
Sbjct: 301 TEGEGDILLFLTGEEEIEDACRKISLEGDELVREQNCGPLKVYPLYGSLPPHQQQKIFEP 360
Query: 552 AP----PG---GRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPIS 604
AP P GRKV+++TNIAE SLTIDGI YV+DPGF+KQ VYNP+ R++SL+++PIS
Sbjct: 361 APTNPNPNGRPGRKVIISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRVRVESLLVSPIS 420
Query: 605 QASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNL 664
+ASA QRAGRAGRT PGKC+RLYTE A++ E+ + PEI R NL T L +K +GI++L
Sbjct: 421 KASAQQRAGRAGRTRPGKCFRLYTEEAFKKELIEQSYPEILRSNLSSTVLELKKLGIDDL 480
Query: 665 LSFDFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLG 724
+ FDF+DPP+P+ ++ A+E+L L L +EG LT LG+ ++FPLDP L+ ML+ S
Sbjct: 481 VHFDFMDPPAPETMMRALEELNYLQCLSDEGDLTALGRLASQFPLDPMLAVMLIGSPAYS 540
Query: 725 CSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQPEGDHLTLLAVYEAW---KAKNF 781
CS+EILTI+AM+ ++F RP + +ADE + F Q +GDHLTL+ VYEA+ +A
Sbjct: 541 CSEEILTIVAMLSVPNVFVRPASARKRADEAKLSFAQADGDHLTLINVYEAFISPEASEI 600
Query: 782 SL-PWCGENFVNSRSL 796
WC +NF++ RSL
Sbjct: 601 GTHKWCRDNFLSYRSL 616
>CGD|CAL0002409 [details] [associations]
symbol:orf19.5865 species:5476 "Candida albicans" [GO:0071006
"U2-type catalytic step 1 spliceosome" evidence=IEA] [GO:0000349
"generation of catalytic spliceosome for first transesterification
step" evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
CGD:CAL0002409 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AACQ01000003 EMBL:AACQ01000004
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12814 RefSeq:XP_722935.1 RefSeq:XP_723081.1 GeneID:3635187
GeneID:3635307 KEGG:cal:CaO19.13287 KEGG:cal:CaO19.5865
Uniprot:Q5ANN5
Length = 865
Score = 1398 (497.2 bits), Expect = 5.3e-143, P = 5.3e-143
Identities = 265/521 (50%), Positives = 380/521 (72%)
Query: 284 EQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGK-IGCTQP 342
E R+SLP++ + E ++ +++NQ LI++GETGSGKTTQL QYL EAGY+ + I CTQP
Sbjct: 224 EVRKSLPVYSYREEFLKIINENQTLIVVGETGSGKTTQLPQYLHEAGYSRNNQVIACTQP 283
Query: 343 RRVAATSVAKRVAEEFGCRLGEEVGYAIRFED-CTGPDTVIKYMTDGMLLREILIDENLS 401
RRVAATSVA RVA E +LGE+VGY IRF+D C TVIKY+TDGMLLRE L D L
Sbjct: 284 RRVAATSVANRVANEMQVKLGEQVGYNIRFDDNCKDGVTVIKYVTDGMLLREFLQDPTLG 343
Query: 402 QYSVIMLDEAHERTINTDVLFGLLKQLVK--RRPDLRLIVTSATLDAERFSGYFFNCNIF 459
+YS IM+DEAHERT++T++L LLK ++ R+ DL++I+ SAT++AE+FS +F N I
Sbjct: 344 KYSAIMIDEAHERTLSTEILLSLLKDVMMTTRKDDLKIIIASATINAEKFSQFFNNAPIL 403
Query: 460 SIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEP-EGDILLFLTGQEEIDFACESLC 518
+IPGR FPV I+Y++Q +Y+ +A+ T+ QIH+ +P GDIL+FLTGQ+EI+ E L
Sbjct: 404 NIPGRRFPVKIHYTKQPEANYIQAAITTIFQIHMTQPLPGDILVFLTGQDEIETMEEILR 463
Query: 519 EKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYV 578
+ I LG + ++V +Y+ LP E+Q +IF+P P RK+V+ATNIAE S+TIDGI YV
Sbjct: 464 DSILKLGDQIDPMIVCSIYANLPQELQQKIFQPTPSNTRKIVLATNIAETSITIDGISYV 523
Query: 579 IDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSP 638
IDPG+ KQNVYNP ++SLV+ P S+ASA QRAGRAGR GPGKC+RL+T+ ++ +E+
Sbjct: 524 IDPGYVKQNVYNPTTGMESLVVVPCSRASADQRAGRAGRVGPGKCFRLFTKWSFYNELDS 583
Query: 639 TTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLT 698
PEIQR+NL L + ++GIN+LL F+F+DPPS +A+I A+ LY+LGAL+ +G LT
Sbjct: 584 NQQPEIQRVNLTSVILLLLSLGINDLLGFEFMDPPSKEAIIKALNLLYALGALNTQGKLT 643
Query: 699 KLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMI-QTGHIFTRPRERQAKADEKRA 757
K GKKM+EFPLDP +K +L S + +I++IIAM+ ++ ++F RP++++ AD+++
Sbjct: 644 KTGKKMSEFPLDPVFTKCILTSDKFDNTKQIISIIAMLNESSNLFYRPKDKKELADKRKQ 703
Query: 758 RFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
F +GD LL +++ W +S+ WC + F+ +++K+
Sbjct: 704 EFNDLQGDQFMLLKIWQQWVDSGYSVQWCQDYFIQYKTMKR 744
>SGD|S000001794 [details] [associations]
symbol:PRP16 "DEAH-box RNA helicase involved in second
catalytic step of splicing" species:4932 "Saccharomyces cerevisiae"
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000350 "generation of catalytic
spliceosome for second transesterification step" evidence=IMP]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0071007 "U2-type catalytic step 2 spliceosome" evidence=IDA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0000386 "second spliceosomal transesterification activity"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001794 GO:GO:0005524 GO:GO:0003676
EMBL:BK006944 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0071007 EMBL:Z27116 GO:GO:0008186
RefSeq:NP_013012.3 GeneID:853961 KEGG:sce:YKR086W KO:K12815
GO:GO:0000350 GeneTree:ENSGT00700000104877 OrthoDB:EOG4GQTD2
EMBL:M31524 EMBL:Z28311 PIR:S38164 RefSeq:NP_013014.3
ProteinModelPortal:P15938 SMR:P15938 DIP:DIP-2824N IntAct:P15938
MINT:MINT-1699731 STRING:P15938 PaxDb:P15938 PeptideAtlas:P15938
EnsemblFungi:YKR086W GeneID:853963 KEGG:sce:YKR088C CYGD:YKR086w
OMA:IDCGYSK NextBio:975386 Genevestigator:P15938 GermOnline:YKR086W
Uniprot:P15938
Length = 1071
Score = 1384 (492.3 bits), Expect = 1.6e-141, P = 1.6e-141
Identities = 304/634 (47%), Positives = 422/634 (66%)
Query: 178 TRVSVDLSPVKVFKNPEGSLSRTAALQSALTKERREVREQQLRTMIDSIPKDLNRPWEDP 237
++VS LS V F+NP+ S A S L RR + + ++ D+ LN
Sbjct: 256 SQVSA-LSMVNPFRNPDSEFSANAKRGSKLVALRR-INMEHIQQSRDNTTV-LNTA---- 308
Query: 238 MPETGERHLAQELRGVGLSARDMPEWKKNAYGKAFTFGQRSKLSIQEQRRSLPIFKLKNE 297
M E L E A+D K FT SK I+ + LP+F+ +++
Sbjct: 309 MGEV----LGLENNN---KAKDKSNQKICDDTALFT---PSKDDIKHTKEQLPVFRCRSQ 358
Query: 298 LIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTT-KGK-IGCTQPRRVAATSVAKRVA 355
L+ + +NQV+++IGETGSGKTTQLAQYL E GY +GK I TQPRRVAA SVAKRVA
Sbjct: 359 LLSLIRENQVVVIIGETGSGKTTQLAQYLYEEGYANDRGKSIVVTQPRRVAAISVAKRVA 418
Query: 356 EEFGCRLGEEVGYAIRFEDCTGPD-TVIKYMTDGMLLREILIDENLSQYSVIMLDEAHER 414
E LG+EVGY+IRFED T + T +K++TDG+LLRE L+D+ L +YS +++DEAHER
Sbjct: 419 MEMQVPLGKEVGYSIRFEDVTDSECTKLKFVTDGILLRETLLDDTLDKYSCVIIDEAHER 478
Query: 415 TINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPVDINYSR 474
++NTD+L G K L+ RR DL+LI+TSAT++A++FS +F N F+IPGRTFPV Y+
Sbjct: 479 SLNTDILLGFFKILLARRRDLKLIITSATMNAKKFSAFFGNAPQFTIPGRTFPVQTIYTS 538
Query: 475 QEVTDYLDSALITVLQIHV--DEPEGDILLFLTGQEEIDFACESLCEKI-----KALG-- 525
V DY+++A+ ++IH+ D GDIL+F+TGQE+I+ ++L EK K G
Sbjct: 539 NPVQDYVEAAVSQAVKIHLANDCSSGDILIFMTGQEDIETTFDTLQEKFLQVYSKKFGTA 598
Query: 526 --KDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGF 583
+++ ++ +LP+YSALP+++Q +IF+ RK+++ATNIAE SLTI GI YVID G+
Sbjct: 599 NFEEINDIEILPIYSALPADLQFKIFQDLHGTKRKIIIATNIAETSLTIKGIRYVIDCGY 658
Query: 584 AKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPE 643
+K VYNPK LDSLVITPIS+A+A QR+GRAGRT PG YRLYTE ++ +M TIPE
Sbjct: 659 SKLKVYNPKIGLDSLVITPISKANADQRSGRAGRTAPGTAYRLYTEDTFKEDMYLQTIPE 718
Query: 644 IQRINLVHTTLTMKAMGINNLLS-FDFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGK 702
IQR NL +T L +K++ + + LS F F+D P Q +S++ +L+ +GA+D G LT LG
Sbjct: 719 IQRTNLSNTLLLLKSLDVTDELSKFPFIDKPPLQTFLSSLYELWFIGAIDTSGQLTPLGL 778
Query: 703 KMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQP 762
+MA+FPL P LSK+LL +V GCSDE+LTI++M+ +F RP+ERQ +AD R +FF
Sbjct: 779 QMAKFPLQPSLSKILLIAVRNGCSDEMLTIVSMLSVPQVFYRPKERQKEADIARNKFFIA 838
Query: 763 EGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSL 796
+ DHLTLL V+E W+A NFS WC ++FV +SL
Sbjct: 839 KSDHLTLLNVFEQWRANNFSSHWCNKHFVQYKSL 872
>UNIPROTKB|F1SDW0 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:CU442751
Ensembl:ENSSSCT00000008044 Uniprot:F1SDW0
Length = 719
Score = 1381 (491.2 bits), Expect = 3.4e-141, P = 3.4e-141
Identities = 288/567 (50%), Positives = 394/567 (69%)
Query: 252 GVGLSARDMPEWKKNAYGKAFT--FGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLI 309
G G+S + E + A A T + + LSI++QR+ LP+FKL+N ++ + + Q ++
Sbjct: 17 GPGVSISE--ERQSLAENSATTVVYNPYAALSIEQQRQKLPVFKLRNHILYLIENYQTVV 74
Query: 310 LIGETGSGKTTQLAQYLAEAGYTTKGKI-GCTQPRRVAATSVAKRVAEEFGCRLGEEVGY 368
++GETG GK+TQ+ QYLAEAG+T +G++ G TQPRRVAA +VA RVAEE G LG EVGY
Sbjct: 75 IVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGY 134
Query: 369 AIRFEDCTGP-DTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQ 427
IRF+DCT P T IK++TDGML+RE+++D L++YS IMLDEAHERT+ TD+ GLLK+
Sbjct: 135 CIRFDDCTDPLATRIKFLTDGMLVREMMVDPLLTKYSAIMLDEAHERTLYTDIAIGLLKK 194
Query: 428 LVKRRPDLRLIVTSATLDAERFSGYFFN-----------CNIFSIPGRTFPVDINYSRQE 476
+ K+R DLRLIV SATLDAE+F FFN C I ++ GRTFPVDI Y +
Sbjct: 195 IQKKRGDLRLIVASATLDAEKFRD-FFNQNDTSDPPRDTCVILTVEGRTFPVDIFYLQSP 253
Query: 477 VTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEKIKALGKDVPE--LVVL 534
V DY+ S + TV++IH E +GDIL FLTGQEE++ L E+ +ALG+ + L VL
Sbjct: 254 VPDYIKSTVETVMKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALGRTGMKRHLRVL 313
Query: 535 PVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQR 594
P+Y+ LPS Q ++FE RKV+VATN+AE S+TI GI YVID GF K YNP+
Sbjct: 314 PMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTA 373
Query: 595 LDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTL 654
++ LV+ P+SQASA QRAGRAGR+ GKCYRLYTE A+ ++ +T+PE+QR NL L
Sbjct: 374 IECLVVVPVSQASANQRAGRAGRSRSGKCYRLYTEDAF-DQLPQSTVPEMQRSNLAPVIL 432
Query: 655 TMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLTK-LGKKMAEFPLDPPL 713
+KA+GI+N+L F F+ PP Q+++ A+E LY+LG LD++ LT+ LG ++AEFPL+P
Sbjct: 433 QLKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMF 492
Query: 714 SKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQPEGDHLTLLAVY 773
+KMLL S + GCS EIL+I AM+Q +IF P ++++A +F EGDHLT+L VY
Sbjct: 493 AKMLLESGNFGCSQEILSIAAMMQIQNIFVVPSNQKSQAIRVHRKFAVEEGDHLTMLNVY 552
Query: 774 EAWKAKNFSLPWCGENFVNSRSLKKTA 800
EA+ N + WC E+F+N + L + A
Sbjct: 553 EAFIKHNKNSQWCQEHFLNYKGLVRAA 579
>UNIPROTKB|E1BDN4 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP CTD:60625
EMBL:DAAA02036576 EMBL:DAAA02036577 EMBL:DAAA02036578
IPI:IPI00707123 RefSeq:NP_001179272.1 UniGene:Bt.52291
Ensembl:ENSBTAT00000005281 GeneID:513148 KEGG:bta:513148
NextBio:20870723 Uniprot:E1BDN4
Length = 703
Score = 1377 (489.8 bits), Expect = 8.9e-141, P = 8.9e-141
Identities = 284/566 (50%), Positives = 393/566 (69%)
Query: 252 GVGLSARDMPEWKKNAYGKAFT--FGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLI 309
G G+S + E + A A T + + LSI++QR+ LP+FKL+N ++ + + Q ++
Sbjct: 17 GPGVSISE--ERQSLAENSATTVVYNPYAALSIEQQRQKLPVFKLRNHILYLIENYQTVV 74
Query: 310 LIGETGSGKTTQLAQYLAEAGYTTKGKI-GCTQPRRVAATSVAKRVAEEFGCRLGEEVGY 368
+IGETG GK+TQ+ QYLAEAG+T +G++ G TQPRRVAA +VA RVAEE G LG EVGY
Sbjct: 75 IIGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGY 134
Query: 369 AIRFEDCTGP-DTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQ 427
IRF+DCT P T IK++TDGML+RE+++D L++YS IMLDEAHERT+ TD+ GLLK+
Sbjct: 135 CIRFDDCTNPLATRIKFLTDGMLVREMMVDPLLTKYSAIMLDEAHERTLYTDIAIGLLKK 194
Query: 428 LVKRRPDLRLIVTSATLDAERFSGYFFN----------CNIFSIPGRTFPVDINYSRQEV 477
+ K+R DLRLIV SATLDAE+F +F + C I ++ GRTFPVDI Y + V
Sbjct: 195 IQKKRGDLRLIVASATLDAEKFRDFFNHNDTSDPTRDTCVILTVEGRTFPVDIFYLQSPV 254
Query: 478 TDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEKIKALGKDVPE--LVVLP 535
DY+ S + TV++IH E +GDIL FLTGQEE++ L E+ +ALG+ + L +LP
Sbjct: 255 PDYIKSTVETVMKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALGQTGMKRHLRILP 314
Query: 536 VYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRL 595
+Y+ LPS Q ++FE RKV+VATN+AE S+TI GI YVID GF K YNP+ +
Sbjct: 315 MYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAI 374
Query: 596 DSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLT 655
+ LV+ P+SQASA QRAGR GR+ GKCYRLYTE A+ ++ +T+PE+QR NL L
Sbjct: 375 ECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAF-DQLPQSTVPEMQRSNLAPVILQ 433
Query: 656 MKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLTK-LGKKMAEFPLDPPLS 714
+KA+GI+N+L F F+ PP Q+++ A+E LY+LG LD++ LT+ LG ++AEFPL+P +
Sbjct: 434 LKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFA 493
Query: 715 KMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQPEGDHLTLLAVYE 774
KMLL S + GCS EIL+I AM+Q ++F P ++++A +F EGDHLT+L VYE
Sbjct: 494 KMLLESGNFGCSQEILSIAAMMQIQNVFVVPSNQKSQAIRAHRKFAVEEGDHLTMLNVYE 553
Query: 775 AWKAKNFSLPWCGENFVNSRSLKKTA 800
A+ N + WC E+F+N + L + A
Sbjct: 554 AFIKHNKNSQWCQEHFLNYKGLVRAA 579
>UNIPROTKB|G4NHA6 [details] [associations]
symbol:MGG_03893 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp43" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:CM001236 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 RefSeq:XP_003719983.1
EnsemblFungi:MGG_03893T0 GeneID:2677480 KEGG:mgr:MGG_03893
Uniprot:G4NHA6
Length = 779
Score = 1377 (489.8 bits), Expect = 8.9e-141, P = 8.9e-141
Identities = 273/549 (49%), Positives = 383/549 (69%)
Query: 265 KNAYGKAFTFGQRSK--LSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQL 322
++A AFT G S+ I + RR+LP+ + + E + H Q+++ +GETGSGKTTQ+
Sbjct: 81 EDADTNAFTGGSHSQQYFKILKTRRNLPVHQHRQEFLDVYHKTQIMVFVGETGSGKTTQI 140
Query: 323 AQYLA--EAGYTTKGKIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDT 380
QY+ E + K + CTQPRRVAA SVA+RVA+E LG+EVGY+IRFE+ T P T
Sbjct: 141 PQYVLYDELPHLNKKMVACTQPRRVAAMSVAQRVADELDVELGQEVGYSIRFENKTTPST 200
Query: 381 VIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVT 440
++KYMTDG LLRE + D N+++YS I++DEAHERT+ TD+L LLKQL RR DL++I+
Sbjct: 201 ILKYMTDGQLLRETIHDPNMTRYSCIIIDEAHERTLATDILMALLKQLSLRRSDLKIIIM 260
Query: 441 SATLDAERFSGYFFNCNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDI 500
SATLDA +F YFF I ++PGRT PV+I Y+ + DY+++++ TVLQIH E EGDI
Sbjct: 261 SATLDAAKFQRYFFEAPILAVPGRTHPVEIFYTAEAERDYIEASVRTVLQIHATEAEGDI 320
Query: 501 LLFLTGQEEIDFACESLCEKIKALGKDVP--ELVVLPVYSALPSEIQSRIFEPAPP---- 554
LLFLTG+EEI+ C + ++ L +D + V P+Y LP + Q +IF APP
Sbjct: 321 LLFLTGEEEIEDVCRKVRLEVDELIRDADCGPMEVYPLYGTLPPQQQQKIFNAAPPPLKK 380
Query: 555 GGR---KVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQR 611
GGR K +VATNIAE SLTIDGI YV+DPGF+KQ +YN + R++SL++TPIS+ASA QR
Sbjct: 381 GGRPGRKCIVATNIAETSLTIDGIVYVVDPGFSKQKIYNARIRVESLLVTPISRASAQQR 440
Query: 612 AGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVD 671
AGRAGRT PGKC+RLYTE+A++ E+ T PEI R NL +T L +K +G+++L+ FDF+D
Sbjct: 441 AGRAGRTRPGKCFRLYTEAAFKKELIEQTYPEILRSNLSNTILELKKLGVDDLVHFDFMD 500
Query: 672 PPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILT 731
PP+P+ ++ A+E+L L L+++G LT LG +E+PLDP L+ ML++S + CS+E+L+
Sbjct: 501 PPAPETMMRALEELNYLSCLNDDGDLTDLGHMASEYPLDPALAVMLVSSPEFYCSNEMLS 560
Query: 732 IIAMIQTGHIFTRPRERQAKADEKRARFFQPEGDHLTLLAVYEAWK---AKNFSLP-WCG 787
+ +++ +F RP + +ADE + F EGDHLTLL Y A+K AK + WC
Sbjct: 561 VTSLLSVPQVFMRPANNRKRADEMKEHFKHMEGDHLTLLNAYHAFKSEMAKGTDMKKWCH 620
Query: 788 ENFVNSRSL 796
E+F++ R L
Sbjct: 621 EHFLSYRHL 629
>UNIPROTKB|E2RQN1 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 EMBL:AAEX03013926
Ensembl:ENSCAFT00000014378 NextBio:20859776 Uniprot:E2RQN1
Length = 698
Score = 1372 (488.0 bits), Expect = 3.0e-140, P = 3.0e-140
Identities = 287/567 (50%), Positives = 393/567 (69%)
Query: 252 GVGLSARDMPEWKKNAYGKAFT--FGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLI 309
G G+S + E + A A T + + LSI++QR+ LP+FKL+N ++ V + Q ++
Sbjct: 9 GPGVSISE--ERQSLAENSATTVVYNPYAALSIEQQRQKLPVFKLRNHILYLVENYQTVV 66
Query: 310 LIGETGSGKTTQLAQYLAEAGYTTKGKI-GCTQPRRVAATSVAKRVAEEFGCRLGEEVGY 368
++GETG GK+TQ+ QYLAEAG+T +G++ G TQPRRVAA +VA RVAEE G LG EVGY
Sbjct: 67 IVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGY 126
Query: 369 AIRFEDCTGP-DTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQ 427
IRF+DCT P T IK++TDGML+RE+++D L++YS IMLDEAHERT+ TD+ GLLK+
Sbjct: 127 CIRFDDCTDPLATRIKFLTDGMLVREMMVDPLLTKYSAIMLDEAHERTLYTDIAIGLLKK 186
Query: 428 LVKRRPDLRLIVTSATLDAERFSGYFFN-----------CNIFSIPGRTFPVDINYSRQE 476
+ ++R DLRL+V SATLDAE+F FFN C I ++ GRTFPVDI Y +
Sbjct: 187 IQRKRGDLRLLVASATLDAEKFRD-FFNQNETSDPTRDTCVILTVEGRTFPVDIFYLQSP 245
Query: 477 VTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEKIKALGKDVPE--LVVL 534
V DY+ S + TV++IH E +GDIL FLTGQEE++ L E+ +ALG+ + L VL
Sbjct: 246 VPDYIKSTVETVMKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALGRTGMKRHLRVL 305
Query: 535 PVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQR 594
P+Y+ LPS Q ++FE RKV+VATN+AE S+TI GI YVID GF K YNP+
Sbjct: 306 PMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTT 365
Query: 595 LDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTL 654
++ LV+ P+SQASA QRAGRAGR+ GKCYRLYTE A+ ++ T+PE+QR NL L
Sbjct: 366 IECLVVAPVSQASANQRAGRAGRSRSGKCYRLYTEEAF-DKLPQCTVPEMQRSNLAPVIL 424
Query: 655 TMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLTK-LGKKMAEFPLDPPL 713
+KA+GI+N+L F F+ PP Q+++ A+E LY+LG LD++ LT+ LG ++AEFPL+P
Sbjct: 425 QLKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRVAEFPLNPMF 484
Query: 714 SKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQPEGDHLTLLAVY 773
+KMLL S + GCS EIL+I AM+Q +IF P ++++A +F EGDHLT+L VY
Sbjct: 485 AKMLLESGNFGCSQEILSIAAMMQIQNIFVVPGNQKSQAIRVHRKFAVEEGDHLTMLNVY 544
Query: 774 EAWKAKNFSLPWCGENFVNSRSLKKTA 800
EA+ N + WC E+F+N + L + A
Sbjct: 545 EAFIKHNKNSQWCQEHFLNYKGLIRAA 571
>UNIPROTKB|E2RQN7 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AAEX03013926
Ensembl:ENSCAFT00000014371 Uniprot:E2RQN7
Length = 702
Score = 1372 (488.0 bits), Expect = 3.0e-140, P = 3.0e-140
Identities = 287/567 (50%), Positives = 393/567 (69%)
Query: 252 GVGLSARDMPEWKKNAYGKAFT--FGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLI 309
G G+S + E + A A T + + LSI++QR+ LP+FKL+N ++ V + Q ++
Sbjct: 17 GPGVSISE--ERQSLAENSATTVVYNPYAALSIEQQRQKLPVFKLRNHILYLVENYQTVV 74
Query: 310 LIGETGSGKTTQLAQYLAEAGYTTKGKI-GCTQPRRVAATSVAKRVAEEFGCRLGEEVGY 368
++GETG GK+TQ+ QYLAEAG+T +G++ G TQPRRVAA +VA RVAEE G LG EVGY
Sbjct: 75 IVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGY 134
Query: 369 AIRFEDCTGP-DTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQ 427
IRF+DCT P T IK++TDGML+RE+++D L++YS IMLDEAHERT+ TD+ GLLK+
Sbjct: 135 CIRFDDCTDPLATRIKFLTDGMLVREMMVDPLLTKYSAIMLDEAHERTLYTDIAIGLLKK 194
Query: 428 LVKRRPDLRLIVTSATLDAERFSGYFFN-----------CNIFSIPGRTFPVDINYSRQE 476
+ ++R DLRL+V SATLDAE+F FFN C I ++ GRTFPVDI Y +
Sbjct: 195 IQRKRGDLRLLVASATLDAEKFRD-FFNQNETSDPTRDTCVILTVEGRTFPVDIFYLQSP 253
Query: 477 VTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEKIKALGKDVPE--LVVL 534
V DY+ S + TV++IH E +GDIL FLTGQEE++ L E+ +ALG+ + L VL
Sbjct: 254 VPDYIKSTVETVMKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALGRTGMKRHLRVL 313
Query: 535 PVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQR 594
P+Y+ LPS Q ++FE RKV+VATN+AE S+TI GI YVID GF K YNP+
Sbjct: 314 PMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTT 373
Query: 595 LDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTL 654
++ LV+ P+SQASA QRAGRAGR+ GKCYRLYTE A+ ++ T+PE+QR NL L
Sbjct: 374 IECLVVAPVSQASANQRAGRAGRSRSGKCYRLYTEEAF-DKLPQCTVPEMQRSNLAPVIL 432
Query: 655 TMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLTK-LGKKMAEFPLDPPL 713
+KA+GI+N+L F F+ PP Q+++ A+E LY+LG LD++ LT+ LG ++AEFPL+P
Sbjct: 433 QLKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRVAEFPLNPMF 492
Query: 714 SKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQPEGDHLTLLAVY 773
+KMLL S + GCS EIL+I AM+Q +IF P ++++A +F EGDHLT+L VY
Sbjct: 493 AKMLLESGNFGCSQEILSIAAMMQIQNIFVVPGNQKSQAIRVHRKFAVEEGDHLTMLNVY 552
Query: 774 EAWKAKNFSLPWCGENFVNSRSLKKTA 800
EA+ N + WC E+F+N + L + A
Sbjct: 553 EAFIKHNKNSQWCQEHFLNYKGLIRAA 579
>RGD|1311165 [details] [associations]
symbol:Dhx35 "DEAH (Asp-Glu-Ala-His) box polypeptide 35"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1311165 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104241 KO:K13117
OMA:NIFVVPP CTD:60625 EMBL:CH474005 IPI:IPI00764730
RefSeq:NP_001102071.1 UniGene:Rn.118078 Ensembl:ENSRNOT00000021435
GeneID:362260 KEGG:rno:362260 UCSC:RGD:1311165 NextBio:679233
Uniprot:D4AEG5
Length = 679
Score = 1370 (487.3 bits), Expect = 4.9e-140, P = 4.9e-140
Identities = 281/565 (49%), Positives = 388/565 (68%)
Query: 252 GVGLSARDMPEWKKNAYGKAFTFGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILI 311
G G+S + + G + + LSI++QR+ LP+FKL+N ++ V + Q ++++
Sbjct: 17 GPGVSISEERQSVTENSGTTVIYNPYAALSIEQQRQKLPVFKLRNHILYLVENYQTVVIV 76
Query: 312 GETGSGKTTQLAQYLAEAGYTTKGKI-GCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAI 370
GETG GK+TQ+ QYLAEAG+T +G++ G TQPRRVAA +VA RVA+E G LG EVGY I
Sbjct: 77 GETGCGKSTQVPQYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVADERGAVLGHEVGYCI 136
Query: 371 RFEDCTGP-DTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLV 429
RF+DCT P T IK++TDGML+RE+++D L++YSV+MLDEAHERT+ TD+ GLLK++
Sbjct: 137 RFDDCTDPLATRIKFLTDGMLVREMMVDPLLTKYSVVMLDEAHERTLYTDIAIGLLKKIQ 196
Query: 430 KRRPDLRLIVTSATLDAERFSGYFFN-----------CNIFSIPGRTFPVDINYSRQEVT 478
K+R DLRLIV SATLDAE+F FFN C I ++ GRTFPVDI Y + V
Sbjct: 197 KKRGDLRLIVASATLDAEKFRD-FFNQNETSDPARDTCVILTVEGRTFPVDIFYLQSPVP 255
Query: 479 DYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEKIKALGKD--VPELVVLPV 536
DY+ + + TV++IH E +GDIL FLTGQEE++ L E+ +AL + L VLP+
Sbjct: 256 DYIKATVDTVVKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALARTGMKKHLRVLPM 315
Query: 537 YSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLD 596
Y+ LPS Q ++FE RKV+VATN+AE S+TI GI YVID GF K YNP+ ++
Sbjct: 316 YAGLPSFEQMKVFERVSHSVRKVIVATNVAETSITISGIVYVIDCGFMKLRAYNPRTAIE 375
Query: 597 SLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTM 656
LV+ P+SQASA QRAGR GR GKCYRLYTE A+ ++ +T+PE+QR NL L +
Sbjct: 376 CLVVVPVSQASANQRAGRGGRNRSGKCYRLYTEEAFE-QLPQSTVPEMQRSNLAPVVLQL 434
Query: 657 KAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLTK-LGKKMAEFPLDPPLSK 715
KA+GI+++L F F+ PP Q+++ A+E LY+LG LD++ LT+ LG ++AEFPL+P +K
Sbjct: 435 KALGIDSVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAK 494
Query: 716 MLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQPEGDHLTLLAVYEA 775
MLL S + GCS EIL+I AM+Q ++F P ++++A +F EGDHLT+L VYEA
Sbjct: 495 MLLESGNFGCSQEILSIAAMMQIQNVFVFPSNQKSQATRVHRKFAVEEGDHLTMLNVYEA 554
Query: 776 WKAKNFSLPWCGENFVNSRSLKKTA 800
+ N S WC E+F+N + L + A
Sbjct: 555 FIKHNKSSQWCQEHFLNYKGLVRAA 579
>UNIPROTKB|D3ZZG1 [details] [associations]
symbol:Dhx35 "Protein Dhx35" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1311165 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00951610
Ensembl:ENSRNOT00000068625 OrthoDB:EOG4V9TQ5 ArrayExpress:D3ZZG1
Uniprot:D3ZZG1
Length = 703
Score = 1370 (487.3 bits), Expect = 4.9e-140, P = 4.9e-140
Identities = 281/565 (49%), Positives = 388/565 (68%)
Query: 252 GVGLSARDMPEWKKNAYGKAFTFGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILI 311
G G+S + + G + + LSI++QR+ LP+FKL+N ++ V + Q ++++
Sbjct: 17 GPGVSISEERQSVTENSGTTVIYNPYAALSIEQQRQKLPVFKLRNHILYLVENYQTVVIV 76
Query: 312 GETGSGKTTQLAQYLAEAGYTTKGKI-GCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAI 370
GETG GK+TQ+ QYLAEAG+T +G++ G TQPRRVAA +VA RVA+E G LG EVGY I
Sbjct: 77 GETGCGKSTQVPQYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVADERGAVLGHEVGYCI 136
Query: 371 RFEDCTGP-DTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLV 429
RF+DCT P T IK++TDGML+RE+++D L++YSV+MLDEAHERT+ TD+ GLLK++
Sbjct: 137 RFDDCTDPLATRIKFLTDGMLVREMMVDPLLTKYSVVMLDEAHERTLYTDIAIGLLKKIQ 196
Query: 430 KRRPDLRLIVTSATLDAERFSGYFFN-----------CNIFSIPGRTFPVDINYSRQEVT 478
K+R DLRLIV SATLDAE+F FFN C I ++ GRTFPVDI Y + V
Sbjct: 197 KKRGDLRLIVASATLDAEKFRD-FFNQNETSDPARDTCVILTVEGRTFPVDIFYLQSPVP 255
Query: 479 DYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEKIKALGKD--VPELVVLPV 536
DY+ + + TV++IH E +GDIL FLTGQEE++ L E+ +AL + L VLP+
Sbjct: 256 DYIKATVDTVVKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALARTGMKKHLRVLPM 315
Query: 537 YSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLD 596
Y+ LPS Q ++FE RKV+VATN+AE S+TI GI YVID GF K YNP+ ++
Sbjct: 316 YAGLPSFEQMKVFERVSHSVRKVIVATNVAETSITISGIVYVIDCGFMKLRAYNPRTAIE 375
Query: 597 SLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTM 656
LV+ P+SQASA QRAGR GR GKCYRLYTE A+ ++ +T+PE+QR NL L +
Sbjct: 376 CLVVVPVSQASANQRAGRGGRNRSGKCYRLYTEEAFE-QLPQSTVPEMQRSNLAPVVLQL 434
Query: 657 KAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLTK-LGKKMAEFPLDPPLSK 715
KA+GI+++L F F+ PP Q+++ A+E LY+LG LD++ LT+ LG ++AEFPL+P +K
Sbjct: 435 KALGIDSVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAK 494
Query: 716 MLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQPEGDHLTLLAVYEA 775
MLL S + GCS EIL+I AM+Q ++F P ++++A +F EGDHLT+L VYEA
Sbjct: 495 MLLESGNFGCSQEILSIAAMMQIQNVFVFPSNQKSQATRVHRKFAVEEGDHLTMLNVYEA 554
Query: 776 WKAKNFSLPWCGENFVNSRSLKKTA 800
+ N S WC E+F+N + L + A
Sbjct: 555 FIKHNKSSQWCQEHFLNYKGLVRAA 579
>UNIPROTKB|E1C4U5 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AADN02019394
IPI:IPI00591771 Ensembl:ENSGALT00000005796 Uniprot:E1C4U5
Length = 705
Score = 1362 (484.5 bits), Expect = 3.5e-139, P = 3.5e-139
Identities = 285/566 (50%), Positives = 384/566 (67%)
Query: 252 GVGLSARDMPEWKKNAYGKAFTFGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILI 311
G G+S + + + G + + LSI++QR+ LP+FKL+N ++ V Q L+++
Sbjct: 17 GPGVSVSEERQSPAESSGVTVVYNPYASLSIEQQRQKLPVFKLRNHILYLVESYQTLVIV 76
Query: 312 GETGSGKTTQLAQYLAEAGYTTKGKI-GCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAI 370
GETG GK+TQ+ QYLAEAG+T +G++ G TQPRRVAA SVA RVA+E G LG EVGY I
Sbjct: 77 GETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVSVAGRVADERGAVLGHEVGYCI 136
Query: 371 RFEDCTGPD-TVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLV 429
RF+DCT P T IK++TDGML+RE++ D L++YSV+MLDEAHERT+ TD+ GLLK++
Sbjct: 137 RFDDCTDPQATRIKFLTDGMLVREMMADPLLTRYSVLMLDEAHERTLYTDIAIGLLKKIQ 196
Query: 430 KRRPDLRLIVTSATLDAERFSGYFFNCN-----------IFSIPGRTFPVDINYSRQEVT 478
K+R DLRLIV SATLDAE+F FFN N I ++ GRTFPVDI Y + V
Sbjct: 197 KKRGDLRLIVASATLDAEKFRD-FFNQNDTGDPSKDTSVILTVEGRTFPVDIFYIQSPVP 255
Query: 479 DYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEKIKALGKDV--PELVVLPV 536
DY+ S + T ++IH E +GDIL FLTGQEE++ L E+ +AL + L VLP+
Sbjct: 256 DYIKSTVETAMKIHQMENDGDILAFLTGQEEVETVVSMLIEQARALSRTGMRKHLRVLPM 315
Query: 537 YSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLD 596
Y+ LPS Q ++FE RKV+VATN+AE S+TI GI YVID GF K YNPK ++
Sbjct: 316 YAGLPSPDQMKVFERVSRSVRKVIVATNVAETSITIHGIAYVIDCGFVKLRAYNPKTAIE 375
Query: 597 SLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSP-TTIPEIQRINLVHTTLT 655
LV+ P+S+ASA QRAGRAGR GKCYRLYT + E P +T+PE+QR NL L
Sbjct: 376 CLVVVPVSKASANQRAGRAGRNRSGKCYRLYTATEEDFEKLPQSTVPEMQRSNLAPVILQ 435
Query: 656 MKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLTK-LGKKMAEFPLDPPLS 714
+KA+GI+N+L F F+ PP Q+++ A+E LY+LG LD LT+ LG ++AEFPL+P +
Sbjct: 436 LKALGIDNVLRFPFLSPPPAQSMVQALELLYALGGLDMHCRLTEPLGMRIAEFPLNPMFA 495
Query: 715 KMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQPEGDHLTLLAVYE 774
KMLL S + GCS EILTI AM+Q +IF P ++++A + +F EGDHLT+L VYE
Sbjct: 496 KMLLESGNFGCSQEILTIAAMMQIQNIFLIPPNQKSQAARQHRKFAVEEGDHLTMLNVYE 555
Query: 775 AWKAKNFSLPWCGENFVNSRSLKKTA 800
A+ + S WC E+F+N + L + +
Sbjct: 556 AFVKHSKSSQWCQEHFLNYKGLVRAS 581
>UNIPROTKB|Q5THR1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
EMBL:AL023803 UniGene:Hs.444520 HGNC:HGNC:15861 IPI:IPI00642913
SMR:Q5THR1 Ensembl:ENST00000373325 Uniprot:Q5THR1
Length = 679
Score = 1361 (484.2 bits), Expect = 4.4e-139, P = 4.4e-139
Identities = 281/565 (49%), Positives = 389/565 (68%)
Query: 252 GVGLSARDMPEWKKNAYGKAFTFGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILI 311
GV +S + +N+ G + + LSI++QR+ LP+FKL+N ++ + + Q ++++
Sbjct: 19 GVSIS-EERQSLAENS-GTTVVYNPYAALSIEQQRQKLPVFKLRNHILYLIENYQTVVIV 76
Query: 312 GETGSGKTTQLAQYLAEAGYTTKGKI-GCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAI 370
GETG GK+TQ+ QYLAEAG+T +G++ G TQPRRVAA +VA RVAEE G LG EVGY I
Sbjct: 77 GETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCI 136
Query: 371 RFEDCTGP-DTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLV 429
RF+DCT T IK++TDGML+RE+++D L++YSVIMLDEAHERT+ TD+ GLLK++
Sbjct: 137 RFDDCTDQLATRIKFLTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQ 196
Query: 430 KRRPDLRLIVTSATLDAERFSGYFFN-----------CNIFSIPGRTFPVDINYSRQEVT 478
K+R DLRLIV SATLDA++F FFN C I ++ GRTFPVDI Y + V
Sbjct: 197 KKRGDLRLIVASATLDADKFRD-FFNQNETSDPARDTCVILTVEGRTFPVDIFYLQSPVP 255
Query: 479 DYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEKIKALGKDVPE--LVVLPV 536
DY+ S + TV++IH E +GD+L FLTGQEE++ L E+ +AL + + L VLP+
Sbjct: 256 DYIKSTVETVVKIHQTEGDGDVLAFLTGQEEVETVVSMLIEQARALARTGMKRHLRVLPM 315
Query: 537 YSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLD 596
Y+ LPS Q ++FE RKV+VATN+AE S+TI GI YVID GF K YNP+ ++
Sbjct: 316 YAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIE 375
Query: 597 SLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTM 656
LV+ P+SQASA QRAGR GR+ GKCYRLYTE A+ ++ +T+PE+QR NL L +
Sbjct: 376 CLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAF-DKLPQSTVPEMQRSNLAPVILQL 434
Query: 657 KAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLTK-LGKKMAEFPLDPPLSK 715
KA+GI+N+L F F+ PP Q+++ A+E LY+LG LD++ LT+ LG ++AEFPL+P +K
Sbjct: 435 KALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAK 494
Query: 716 MLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQPEGDHLTLLAVYEA 775
MLL S + GCS EIL+I AM+Q +IF P +++ A +F EGDHLT+L +YEA
Sbjct: 495 MLLESGNFGCSQEILSIAAMMQIQNIFVVPPNQKSHAIRVHRKFAVEEGDHLTMLNIYEA 554
Query: 776 WKAKNFSLPWCGENFVNSRSLKKTA 800
+ N WC E+F+N + L + A
Sbjct: 555 FIKHNKDSKWCQEHFLNYKGLVRAA 579
>UNIPROTKB|Q9H5Z1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CH471077 GO:GO:0003676 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K13117 OMA:NIFVVPP
EMBL:AK026412 EMBL:AK025541 EMBL:AL023803 EMBL:BC132669
IPI:IPI00030288 RefSeq:NP_068750.2 UniGene:Hs.444520
ProteinModelPortal:Q9H5Z1 SMR:Q9H5Z1 IntAct:Q9H5Z1
PhosphoSite:Q9H5Z1 DMDM:20137971 PRIDE:Q9H5Z1 DNASU:60625
Ensembl:ENST00000252011 GeneID:60625 KEGG:hsa:60625 UCSC:uc002xjh.3
CTD:60625 GeneCards:GC20P037590 HGNC:HGNC:15861 neXtProt:NX_Q9H5Z1
PharmGKB:PA27222 InParanoid:Q9H5Z1 PhylomeDB:Q9H5Z1
GenomeRNAi:60625 NextBio:65461 ArrayExpress:Q9H5Z1 Bgee:Q9H5Z1
CleanEx:HS_DHX35 Genevestigator:Q9H5Z1 GermOnline:ENSG00000101452
Uniprot:Q9H5Z1
Length = 703
Score = 1361 (484.2 bits), Expect = 4.4e-139, P = 4.4e-139
Identities = 281/565 (49%), Positives = 389/565 (68%)
Query: 252 GVGLSARDMPEWKKNAYGKAFTFGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILI 311
GV +S + +N+ G + + LSI++QR+ LP+FKL+N ++ + + Q ++++
Sbjct: 19 GVSIS-EERQSLAENS-GTTVVYNPYAALSIEQQRQKLPVFKLRNHILYLIENYQTVVIV 76
Query: 312 GETGSGKTTQLAQYLAEAGYTTKGKI-GCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAI 370
GETG GK+TQ+ QYLAEAG+T +G++ G TQPRRVAA +VA RVAEE G LG EVGY I
Sbjct: 77 GETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCI 136
Query: 371 RFEDCTGP-DTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLV 429
RF+DCT T IK++TDGML+RE+++D L++YSVIMLDEAHERT+ TD+ GLLK++
Sbjct: 137 RFDDCTDQLATRIKFLTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQ 196
Query: 430 KRRPDLRLIVTSATLDAERFSGYFFN-----------CNIFSIPGRTFPVDINYSRQEVT 478
K+R DLRLIV SATLDA++F FFN C I ++ GRTFPVDI Y + V
Sbjct: 197 KKRGDLRLIVASATLDADKFRD-FFNQNETSDPARDTCVILTVEGRTFPVDIFYLQSPVP 255
Query: 479 DYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEKIKALGKDVPE--LVVLPV 536
DY+ S + TV++IH E +GD+L FLTGQEE++ L E+ +AL + + L VLP+
Sbjct: 256 DYIKSTVETVVKIHQTEGDGDVLAFLTGQEEVETVVSMLIEQARALARTGMKRHLRVLPM 315
Query: 537 YSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLD 596
Y+ LPS Q ++FE RKV+VATN+AE S+TI GI YVID GF K YNP+ ++
Sbjct: 316 YAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIE 375
Query: 597 SLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTM 656
LV+ P+SQASA QRAGR GR+ GKCYRLYTE A+ ++ +T+PE+QR NL L +
Sbjct: 376 CLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAF-DKLPQSTVPEMQRSNLAPVILQL 434
Query: 657 KAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLTK-LGKKMAEFPLDPPLSK 715
KA+GI+N+L F F+ PP Q+++ A+E LY+LG LD++ LT+ LG ++AEFPL+P +K
Sbjct: 435 KALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAK 494
Query: 716 MLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQPEGDHLTLLAVYEA 775
MLL S + GCS EIL+I AM+Q +IF P +++ A +F EGDHLT+L +YEA
Sbjct: 495 MLLESGNFGCSQEILSIAAMMQIQNIFVVPPNQKSHAIRVHRKFAVEEGDHLTMLNIYEA 554
Query: 776 WKAKNFSLPWCGENFVNSRSLKKTA 800
+ N WC E+F+N + L + A
Sbjct: 555 FIKHNKDSKWCQEHFLNYKGLVRAA 579
>GENEDB_PFALCIPARUM|MAL13P1.322 [details] [associations]
symbol:MAL13P1.322 "splicing factor,
putative" species:5833 "Plasmodium falciparum" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 684 (245.8 bits), Expect = 4.8e-139, Sum P(3) = 4.8e-139
Identities = 128/266 (48%), Positives = 185/266 (69%)
Query: 533 VLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPK 592
+ P+YS L SE QS+IF+ RK++V+TNIAE SLT+DGI YVID G+ K VYN
Sbjct: 774 IFPIYSQLSSEQQSKIFKKYDL--RKIIVSTNIAETSLTLDGIKYVIDTGYCKLKVYNQT 831
Query: 593 QRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHT 652
+D L +TPISQA+A QR+GRAGRTG G CYRLYTE+ + ++ IPEIQR NL +
Sbjct: 832 IGMDVLQVTPISQANANQRSGRAGRTGAGICYRLYTENTFLCDLYQNNIPEIQRSNLSNV 891
Query: 653 TLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPP 712
L +K++ + NL FDF+D PS +++I+++ +L+ LGA++ EG LT +G+KM +FPLDPP
Sbjct: 892 VLLLKSLHVQNLFEFDFIDVPSKESIINSLHELWVLGAINNEGNLTDIGRKMVQFPLDPP 951
Query: 713 LSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQPEGDHLTLLAV 772
LSK+++ S + C+ EIL I++M+ + IF +E + K+ +F PE DHLTLL +
Sbjct: 952 LSKIVIYSQNFQCTKEILIIVSMLSSPSIFLESKENNESIESKKEKFTVPESDHLTLLNI 1011
Query: 773 YEAWKAKNFSLPWCGENFVNSRSLKK 798
Y W++ N+S WC +NF+ ++L K
Sbjct: 1012 YLQWRSHNYSYSWCTKNFIQYKALNK 1037
Score = 674 (242.3 bits), Expect = 4.8e-139, Sum P(3) = 4.8e-139
Identities = 136/249 (54%), Positives = 179/249 (71%)
Query: 277 RSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGK 336
+ K + + + SLPI+K K+EL+ AV++N ++I++GETGSGKTTQ+ QYL E GY G
Sbjct: 467 KDKEELLKLKESLPIYKSKHELLDAVYNNNIIIIVGETGSGKTTQIVQYLYEEGYHRNGI 526
Query: 337 IGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILI 396
I CTQPRRVAA SVA RV+ E +G VGY IRFED T DT I+Y+TDG+LLRE L
Sbjct: 527 ICCTQPRRVAAVSVAYRVSYEMNVDIGSLVGYTIRFEDNTTKDTKIRYVTDGILLRETLN 586
Query: 397 DENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNC 456
D+ L +YSVI++DEAHER+INTDVL G+LK + +R DL+LIVTSAT+DA++FS +F N
Sbjct: 587 DKELDKYSVIIMDEAHERSINTDVLLGILKNICLKRNDLKLIVTSATIDAKKFSAFFGNA 646
Query: 457 NIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHV-----DEPEGDILLFLTGQEEID 511
I++I GRTF V I Y R DY++ A+ +QIHV D GDIL+F+TGQE+I+
Sbjct: 647 PIYNIQGRTFKVHIEYLRTPCNDYIECAVQKAIQIHVSDNNYDNNFGDILIFMTGQEDIN 706
Query: 512 FACESLCEK 520
C L E+
Sbjct: 707 ATCYLLSER 715
Score = 62 (26.9 bits), Expect = 4.8e-139, Sum P(3) = 4.8e-139
Identities = 24/98 (24%), Positives = 46/98 (46%)
Query: 31 DKVLAEFISESGRNSETVEIFDDKLKEYGADLPNYLVRT-LFNVIHTILHPKPKLQSKKK 89
DK+ F+ +N +T+E K+ + L V++ +F I T + + K
Sbjct: 21 DKIQTGFLYNEKKNEKTLEFKRRKVNKINKKLTTDDVKSNIFKKIDTF--EEASFKKDKV 78
Query: 90 SGRDRKTNYKAEFENDRERSGRYCKSNPPMLKDMPVSR 127
S R N K ++ DR+++ + K+N +KD V++
Sbjct: 79 SKRYLNNNEKEKYYKDRDKN-KIKKNN---IKDKHVNQ 112
>UNIPROTKB|C0H5K5 [details] [associations]
symbol:MAL13P1.322 "Splicing factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 684 (245.8 bits), Expect = 4.8e-139, Sum P(3) = 4.8e-139
Identities = 128/266 (48%), Positives = 185/266 (69%)
Query: 533 VLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPK 592
+ P+YS L SE QS+IF+ RK++V+TNIAE SLT+DGI YVID G+ K VYN
Sbjct: 774 IFPIYSQLSSEQQSKIFKKYDL--RKIIVSTNIAETSLTLDGIKYVIDTGYCKLKVYNQT 831
Query: 593 QRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHT 652
+D L +TPISQA+A QR+GRAGRTG G CYRLYTE+ + ++ IPEIQR NL +
Sbjct: 832 IGMDVLQVTPISQANANQRSGRAGRTGAGICYRLYTENTFLCDLYQNNIPEIQRSNLSNV 891
Query: 653 TLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPP 712
L +K++ + NL FDF+D PS +++I+++ +L+ LGA++ EG LT +G+KM +FPLDPP
Sbjct: 892 VLLLKSLHVQNLFEFDFIDVPSKESIINSLHELWVLGAINNEGNLTDIGRKMVQFPLDPP 951
Query: 713 LSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQPEGDHLTLLAV 772
LSK+++ S + C+ EIL I++M+ + IF +E + K+ +F PE DHLTLL +
Sbjct: 952 LSKIVIYSQNFQCTKEILIIVSMLSSPSIFLESKENNESIESKKEKFTVPESDHLTLLNI 1011
Query: 773 YEAWKAKNFSLPWCGENFVNSRSLKK 798
Y W++ N+S WC +NF+ ++L K
Sbjct: 1012 YLQWRSHNYSYSWCTKNFIQYKALNK 1037
Score = 674 (242.3 bits), Expect = 4.8e-139, Sum P(3) = 4.8e-139
Identities = 136/249 (54%), Positives = 179/249 (71%)
Query: 277 RSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGK 336
+ K + + + SLPI+K K+EL+ AV++N ++I++GETGSGKTTQ+ QYL E GY G
Sbjct: 467 KDKEELLKLKESLPIYKSKHELLDAVYNNNIIIIVGETGSGKTTQIVQYLYEEGYHRNGI 526
Query: 337 IGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILI 396
I CTQPRRVAA SVA RV+ E +G VGY IRFED T DT I+Y+TDG+LLRE L
Sbjct: 527 ICCTQPRRVAAVSVAYRVSYEMNVDIGSLVGYTIRFEDNTTKDTKIRYVTDGILLRETLN 586
Query: 397 DENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNC 456
D+ L +YSVI++DEAHER+INTDVL G+LK + +R DL+LIVTSAT+DA++FS +F N
Sbjct: 587 DKELDKYSVIIMDEAHERSINTDVLLGILKNICLKRNDLKLIVTSATIDAKKFSAFFGNA 646
Query: 457 NIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHV-----DEPEGDILLFLTGQEEID 511
I++I GRTF V I Y R DY++ A+ +QIHV D GDIL+F+TGQE+I+
Sbjct: 647 PIYNIQGRTFKVHIEYLRTPCNDYIECAVQKAIQIHVSDNNYDNNFGDILIFMTGQEDIN 706
Query: 512 FACESLCEK 520
C L E+
Sbjct: 707 ATCYLLSER 715
Score = 62 (26.9 bits), Expect = 4.8e-139, Sum P(3) = 4.8e-139
Identities = 24/98 (24%), Positives = 46/98 (46%)
Query: 31 DKVLAEFISESGRNSETVEIFDDKLKEYGADLPNYLVRT-LFNVIHTILHPKPKLQSKKK 89
DK+ F+ +N +T+E K+ + L V++ +F I T + + K
Sbjct: 21 DKIQTGFLYNEKKNEKTLEFKRRKVNKINKKLTTDDVKSNIFKKIDTF--EEASFKKDKV 78
Query: 90 SGRDRKTNYKAEFENDRERSGRYCKSNPPMLKDMPVSR 127
S R N K ++ DR+++ + K+N +KD V++
Sbjct: 79 SKRYLNNNEKEKYYKDRDKN-KIKKNN---IKDKHVNQ 112
>ZFIN|ZDB-GENE-070410-11 [details] [associations]
symbol:zgc:158828 "zgc:158828" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-070410-11
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 OrthoDB:EOG4V9TQ5
EMBL:BC117646 IPI:IPI00851766 UniGene:Dr.86097 Uniprot:Q1ECW4
Length = 691
Score = 1350 (480.3 bits), Expect = 6.5e-138, P = 6.5e-138
Identities = 277/548 (50%), Positives = 377/548 (68%)
Query: 269 GKAFTFGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAE 328
G F + L+I++QR+ LP+FK +N ++ V Q ++++GETGSGK+TQ+ QYL E
Sbjct: 24 GSPIVFNPHTALTIEKQRQRLPVFKHRNNILYLVESFQTVVIVGETGSGKSTQIPQYLLE 83
Query: 329 AGYTTKGK-IGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPD-TVIKYMT 386
AG+ +GK IG TQPRRVAATSVA RVAEE G LG EVGY IRF+DC+ P T IK++T
Sbjct: 84 AGWAAEGKVIGVTQPRRVAATSVATRVAEERGAFLGHEVGYTIRFDDCSDPHATRIKFLT 143
Query: 387 DGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDA 446
DGML+RE++ D L +YSV++LDEAHERT+ TD+ GLLK+++K+R DLRLIV SATLDA
Sbjct: 144 DGMLVREMMSDPLLKKYSVLILDEAHERTLYTDIAIGLLKKILKKRRDLRLIVASATLDA 203
Query: 447 ERFSGYF-FN---------CNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEP 496
++F +F N C I ++ GRTFPVDI Y+ V DY+ + + TVL+IH E
Sbjct: 204 KKFQDFFNLNESGDASKDTCGILTVEGRTFPVDIFYTVSPVPDYVKATVETVLKIHETED 263
Query: 497 EGDILLFLTGQEEIDFACESLCEKIKALGKD--VPELVVLPVYSALPSEIQSRIFEPAPP 554
+GD+L FLTGQEE++ L E+ + L + L VLP+Y+ LP Q R+FE P
Sbjct: 264 DGDVLAFLTGQEEVEKVVSLLQEQARTLSRYGMKKHLCVLPMYAGLPYNEQMRVFERMAP 323
Query: 555 GGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGR 614
RKVVVATNIAE S+TI+G+ +VID F K YNP+ ++SL++TPIS+ASA QRAGR
Sbjct: 324 TVRKVVVATNIAETSITINGVVFVIDCAFVKIRAYNPRTAIESLIVTPISKASACQRAGR 383
Query: 615 AGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPS 674
AGR GKC+RLYTE + ++ +T+PE+QR NL L +KA+GI+N+L F F+ PP
Sbjct: 384 AGRNRAGKCFRLYTEEDFE-KLPESTVPEMQRSNLAPVILQLKALGIDNVLRFSFLSPPP 442
Query: 675 PQALISAMEQLYSLGALDEEGLLTK-LGKKMAEFPLDPPLSKMLLASVDLGCSDEILTII 733
Q+++ A+E L++LG LD+ G LT +G +MAEFPL P +KMLL S + GCS EI+TI
Sbjct: 443 AQSMVQALELLFALGGLDQYGRLTDPMGVRMAEFPLSPMFAKMLLESGNFGCSKEIVTIA 502
Query: 734 AMIQTGHIFTRPRERQAKADEKRARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNS 793
AM+Q +IF P ++ A + +F EGDHLT+L VYEA+ S WC ++F+N
Sbjct: 503 AMMQIQNIFVAPHNQRKSAAREHRKFAVAEGDHLTMLNVYEAFIKHQKSSQWCQDHFLNY 562
Query: 794 RSL-KKTA 800
+ L + TA
Sbjct: 563 KGLLRATA 570
>DICTYBASE|DDB_G0270110 [details] [associations]
symbol:dhx33 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0270110 GO:GO:0005524 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14781 RefSeq:XP_646548.1
EnsemblProtists:DDB0233404 GeneID:8617514 KEGG:ddi:DDB_G0270110
InParanoid:Q55CD3 OMA:EICINRE Uniprot:Q55CD3
Length = 730
Score = 1320 (469.7 bits), Expect = 9.8e-135, P = 9.8e-135
Identities = 267/534 (50%), Positives = 374/534 (70%)
Query: 282 IQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCTQ 341
I+ Q+ SLP+F K+ L++ ++ +I+I ETG+GKTTQ+ QYL E GY G I TQ
Sbjct: 66 IKLQKESLPVFTAKDALLKNFKEHSTVIIISETGTGKTTQIPQYLYENGYKDNGIIAITQ 125
Query: 342 PRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLS 401
PRRVAA S++KRV++E G LG++VGY +RF+D T T +KYMTDGML+RE ++D +LS
Sbjct: 126 PRRVAAVSISKRVSQEMGVELGDQVGYCVRFDDKTNEKTKLKYMTDGMLVREAMLDSSLS 185
Query: 402 QYSVIMLDEAHERTINTDVLFGLLKQLVKRRPD---LRLIVTSATLDAERFSGYFFNCNI 458
+YSVI+LDEAHERT+NTDVLFGLLK + KRR L++I+ SATLDAE FS YF N +
Sbjct: 186 KYSVIILDEAHERTLNTDVLFGLLKSIQKRREKKNPLKIIIMSATLDAELFSQYFNNAPV 245
Query: 459 FSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHV----------DEPE--GDILLFLTG 506
I GR FPV I Y+ + DY+D+ALITVLQIH+ +E E GDIL+FLTG
Sbjct: 246 LYIEGRQFPVQIYYTEEIQKDYVDAALITVLQIHIAHLTDKSINKEEEEDGGDILVFLTG 305
Query: 507 QEEIDFACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIA 566
++EI+ + L ++I L +L+V P++SALP E Q ++FE AP G RKV++ATNIA
Sbjct: 306 RDEIENLEKLLLDRIPRLPVGSKDLIVCPIFSALPQEQQMKVFEKAPKGSRKVILATNIA 365
Query: 567 EASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRL 626
E SLTI+GI YV+D G K ++NPK +DSL I PIS+ASA QR GRAGR GKCYRL
Sbjct: 366 ETSLTINGIRYVVDSGAVKSKIFNPKIGIDSLNIIPISKASAKQRTGRAGREFEGKCYRL 425
Query: 627 YTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLY 686
YT+ + ++ ++IPEI+R N+ + L +K +GIN++LSFDF++ P ++I ++E L+
Sbjct: 426 YTQETFE-KLDTSSIPEIKRSNIANVILQLKTIGINDILSFDFLESPPVASVIKSLELLF 484
Query: 687 SLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPR 746
L A+ + G LT+LGKKMA FPLDP SK L+ S++ CS+E+L II+++ IF P+
Sbjct: 485 CLDAISDNGSLTELGKKMALFPLDPMYSKTLIKSIEFECSEEVLIIISILSVESIFFTPK 544
Query: 747 ERQAKADEKRARFFQPEGDHLTLLAVY-EAWKAK-NFSLPWCGENFVNSRSLKK 798
E++ + ++ + FF P+GDH+T L V+ E K+K WC ++F+N +S+ K
Sbjct: 545 EKKKEVEDVKKIFFSPDGDHITFLNVFREFQKSKPQQQQQWCFDHFINLKSMIK 598
>CGD|CAL0005059 [details] [associations]
symbol:orf19.2818 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0000386
"second spliceosomal transesterification activity" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 CGD:CAL0005059
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACQ01000080 EMBL:AACQ01000079 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12815
RefSeq:XP_715749.1 RefSeq:XP_715799.1 STRING:Q5A227 GeneID:3642531
GeneID:3642595 KEGG:cal:CaO19.10336 KEGG:cal:CaO19.2818
Uniprot:Q5A227
Length = 1070
Score = 1294 (460.6 bits), Expect = 5.6e-132, P = 5.6e-132
Identities = 268/514 (52%), Positives = 358/514 (69%)
Query: 282 IQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTK----GK- 336
IQ+QR+SLP F ++N+L+ + DNQV I+IGETGSGKTTQL Q+L E G+ G+
Sbjct: 351 IQQQRKSLPAFAVRNDLLTTIRDNQVTIVIGETGSGKTTQLTQFLYEDGFGANIDKNGEK 410
Query: 337 --IGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCT-GPDTVIKYMTDGMLLRE 393
I CTQPRRVAA SVAKRV+EE C+LGEEVGY+IRFED T TVIKYMT+G+LLRE
Sbjct: 411 RIIACTQPRRVAAMSVAKRVSEEMNCKLGEEVGYSIRFEDKTDNKKTVIKYMTEGILLRE 470
Query: 394 ILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYF 453
IL D L+ YS I++DEAHER++NTD+L GL K L+ +R DL+LIVTSAT++A RF+ +F
Sbjct: 471 ILADPMLANYSCIIMDEAHERSLNTDILLGLFKNLLAKRKDLKLIVTSATMNANRFTKFF 530
Query: 454 FNCNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHV--------DEPEGDILLFLT 505
F IPGRTFPV++ ++R DY++ A+ VL IH+ + +GDIL+F+T
Sbjct: 531 GVAPQFHIPGRTFPVEVFFNRDVNMDYVEMAVKQVLTIHLGRWNADNNNANDGDILVFMT 590
Query: 506 GQEEIDFACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNI 565
GQE+I+ C+ + EK+ L +D P L + P+YS +P ++Q +IF RKVVVATNI
Sbjct: 591 GQEDIEITCDLIKEKLNLL-EDPPPLDIFPIYSTMPQDLQKKIFNKTNLQRRKVVVATNI 649
Query: 566 AEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYR 625
AE SLT+DGI YVID G K VYNPK +D+L + PIS A+A QR+GRAGRTG G YR
Sbjct: 650 AETSLTVDGIKYVIDCGLVKVKVYNPKLGMDTLQVVPISLANADQRSGRAGRTGAGIAYR 709
Query: 626 LYTESAYRSE-MSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQ 684
LYTE A + M IPEIQR NL + L +K++ +N++ SF F+DPP L ++
Sbjct: 710 LYTEKATEPDSMYVQPIPEIQRSNLSNIMLLLKSLKVNDINSFPFLDPPPKDLLNCSLYD 769
Query: 685 LYSLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLASV--DLGCSDEILTIIAMIQTGHIF 742
L+++GALD G LTKLG M +FP++P L+K++L S + CS+E++TI+AM+ +IF
Sbjct: 770 LWAIGALDNLGELTKLGHSMTQFPIEPTLAKLILLSTQPEFHCSEEVVTIVAMLSVPNIF 829
Query: 743 TRPRERQAKADEKRARFFQPEGDHLTLLAVYEAW 776
RP+ER +AD R +F E DHLTLL V+ W
Sbjct: 830 NRPKERANEADMAREKFIISESDHLTLLNVFNQW 863
Score = 1168 (416.2 bits), Expect = 1.3e-118, P = 1.3e-118
Identities = 245/480 (51%), Positives = 329/480 (68%)
Query: 337 IGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCT-GPDTVIKYMTDGMLLREIL 395
I CTQPRRVAA SVAKRV+EE C+LGEEVGY+IRFED T TVIKYMT+G+LLREIL
Sbjct: 413 IACTQPRRVAAMSVAKRVSEEMNCKLGEEVGYSIRFEDKTDNKKTVIKYMTEGILLREIL 472
Query: 396 IDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFN 455
D L+ YS I++DEAHER++NTD+L GL K L+ +R DL+LIVTSAT++A RF+ +F
Sbjct: 473 ADPMLANYSCIIMDEAHERSLNTDILLGLFKNLLAKRKDLKLIVTSATMNANRFTKFFGV 532
Query: 456 CNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHV--------DEPEGDILLFLTGQ 507
F IPGRTFPV++ ++R DY++ A+ VL IH+ + +GDIL+F+TGQ
Sbjct: 533 APQFHIPGRTFPVEVFFNRDVNMDYVEMAVKQVLTIHLGRWNADNNNANDGDILVFMTGQ 592
Query: 508 EEIDFACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAE 567
E+I+ C+ + EK+ L +D P L + P+YS +P ++Q +IF RKVVVATNIAE
Sbjct: 593 EDIEITCDLIKEKLNLL-EDPPPLDIFPIYSTMPQDLQKKIFNKTNLQRRKVVVATNIAE 651
Query: 568 ASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLY 627
SLT+DGI YVID G K VYNPK +D+L + PIS A+A QR+GRAGRTG G YRLY
Sbjct: 652 TSLTVDGIKYVIDCGLVKVKVYNPKLGMDTLQVVPISLANADQRSGRAGRTGAGIAYRLY 711
Query: 628 TESAYRSE-MSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLY 686
TE A + M IPEIQR NL + L +K++ +N++ SF F+DPP L ++ L+
Sbjct: 712 TEKATEPDSMYVQPIPEIQRSNLSNIMLLLKSLKVNDINSFPFLDPPPKDLLNCSLYDLW 771
Query: 687 SLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLASV--DLGCSDEILTIIAMIQTGHIFTR 744
++GALD G LTKLG M +FP++P L+K++L S + CS+E++TI+AM+ +IF R
Sbjct: 772 AIGALDNLGELTKLGHSMTQFPIEPTLAKLILLSTQPEFHCSEEVVTIVAMLSVPNIFNR 831
Query: 745 PRERQAKADEKRARFFQPEGDHLTLLAVYEAW-----KAK-NFSL--PWCGENFVNSRSL 796
P+ER +AD R +F E DHLTLL V+ W K K N++ WC +NF+ +SL
Sbjct: 832 PKERANEADMAREKFIISESDHLTLLNVFNQWNINLNKFKGNYTKINNWCNKNFLQLKSL 891
>SGD|S000005294 [details] [associations]
symbol:PRP2 "RNA-dependent ATPase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008186 "RNA-dependent ATPase
activity" evidence=IDA] [GO:0071006 "U2-type catalytic step 1
spliceosome" evidence=IMP;IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0000349 "generation of catalytic spliceosome for
first transesterification step" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000005294
GO:GO:0005524 GO:GO:0005634 EMBL:BK006947 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:X77395
GO:GO:0000349 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
OrthoDB:EOG4SBJ63 GO:GO:0008186 EMBL:X55936 EMBL:X55999 EMBL:Z71626
PIR:S12334 RefSeq:NP_014408.1 ProteinModelPortal:P20095 SMR:P20095
DIP:DIP-3961N IntAct:P20095 MINT:MINT-496813 STRING:P20095
PaxDb:P20095 EnsemblFungi:YNR011C GeneID:855745 KEGG:sce:YNR011C
CYGD:YNR011c KO:K12814 OMA:DDKIHIN NextBio:980148
Genevestigator:P20095 GermOnline:YNR011C Uniprot:P20095
Length = 876
Score = 1288 (458.5 bits), Expect = 2.4e-131, P = 2.4e-131
Identities = 260/526 (49%), Positives = 361/526 (68%)
Query: 280 LSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGK--I 337
L+IQE R+ LP+ + K+EL+Q + NQVLI++GETGSGKTTQL QYL E G+T +GK I
Sbjct: 214 LTIQEARKLLPVHQYKDELLQEIKKNQVLIIMGETGSGKTTQLPQYLVEDGFTDQGKLQI 273
Query: 338 GCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPD-TVIKYMTDGMLLREILI 396
TQPRRVAATSVA RVA+E LG+EVGY IRFED T P+ TV+KYMTDGMLLRE L
Sbjct: 274 AITQPRRVAATSVAARVADEMNVVLGKEVGYQIRFEDKTTPNKTVLKYMTDGMLLREFLT 333
Query: 397 DENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNC 456
D LS+YS IM+DEAHERT+ TD+L GLLK ++ +RP L+L+++SAT++A++FS +F NC
Sbjct: 334 DSKLSKYSCIMIDEAHERTLATDILIGLLKDILPQRPTLKLLISSATMNAKKFSEFFDNC 393
Query: 457 NIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEP-EGDILLFLTGQEEIDFACE 515
IF++PGR +PVDI+Y+ Q +Y+ +A+ T+ QIH + GDIL+FLTGQEEI+
Sbjct: 394 PIFNVPGRRYPVDIHYTLQPEANYIHAAITTIFQIHTTQSLPGDILVFLTGQEEIERTKT 453
Query: 516 SLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGI 575
L E + LG ++++ P+Y+ LP E Q +IF+P P RKVV+ATNIAE SLTIDGI
Sbjct: 454 KLEEIMSKLGSRTKQMIITPIYANLPQEQQLKIFQPTPENCRKVVLATNIAETSLTIDGI 513
Query: 576 FYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSE 635
YVIDPGF K+N Y P + L+ P S+AS QRAGRAGR GPGKC+R++T+ +Y E
Sbjct: 514 RYVIDPGFVKENSYVPSTGMTQLLTVPCSRASVDQRAGRAGRVGPGKCFRIFTKWSYLHE 573
Query: 636 MSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEG 695
+ PEI R NL +T L + ++G+ +L+ F +D PS L ++E LY LGAL+ +G
Sbjct: 574 LELMPKPEITRTNLSNTVLLLLSLGVTDLIKFPLMDKPSIPTLRKSLENLYILGALNSKG 633
Query: 696 LLTKLGKKMAEFPLDPPLSKMLLASVD----LGCSDEILTIIAMI-QTGHIFTRPRERQA 750
+T+LGK M EFP +P +K+L + G +E LTI++M+ +T +F ++R A
Sbjct: 634 TITRLGKMMCEFPCEPEFAKVLYTAATHEQCQGVLEECLTIVSMLHETPSLFIG-QKRDA 692
Query: 751 KADEKRARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSL 796
A + E DH+ L ++ W+ FS WC ++ + +++
Sbjct: 693 AASV----LSEVESDHILYLEIFNQWRNSKFSRSWCQDHKIQFKTM 734
>UNIPROTKB|F1NY80 [details] [associations]
symbol:F1NY80 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104421 OMA:PSRSTWE
EMBL:AADN02054197 EMBL:AADN02054196 IPI:IPI00821409
Ensembl:ENSGALT00000038723 Uniprot:F1NY80
Length = 1170
Score = 978 (349.3 bits), Expect = 1.9e-130, Sum P(3) = 1.9e-130
Identities = 214/428 (50%), Positives = 283/428 (66%)
Query: 171 PAFLQGQTRVSVDLSPVKVFKNPEGSLSRTAALQSALTKERREVREQQLR---------T 221
P FL G+ + PV K+ L+ A S L ++ RE +E++ T
Sbjct: 420 PPFLDGRIVFTKQPEPVIPVKDATSDLAIIARKGSQLVRKHREQKERKRAQHKHWELAGT 479
Query: 222 MIDSIPKDLNRPWEDPM-PETGERHLAQELRGVGLSARDMPEWKKNAYGKAFTFGQRSKL 280
+ I +D M E G+ E + A M E K A + F + K
Sbjct: 480 KLGDIMGIKKEEEKDEMVTEDGKVDYRTEQK----FAEHMKE-KSEARSE---FAK--KK 529
Query: 281 SIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCT 340
SI EQR+ LPIF ++ EL+ + DN ++I++GETGSGKTTQL QYL E GYT G IGCT
Sbjct: 530 SILEQRQYLPIFAVQQELLSILRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCT 589
Query: 341 QPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENL 400
QPRRVAA SVAKRV+EE G RLGEEVGYAIRFEDCT +T+IKYMTDG+LLRE L + +L
Sbjct: 590 QPRRVAAMSVAKRVSEEMGVRLGEEVGYAIRFEDCTSENTIIKYMTDGILLRESLREADL 649
Query: 401 SQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFS 460
YS I++DEAHER++NTDVLFGLL+++V RR DL+L+VTSAT+DA++F+ +F N IF
Sbjct: 650 DNYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLVVTSATMDADKFASFFGNVPIFH 709
Query: 461 IPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEK 520
IPGRTFPVDI +S+ DY+++A+ LQ+H+ GDIL+F+ GQE+I+ E + E
Sbjct: 710 IPGRTFPVDILFSKTPQEDYVEAAVKQALQVHLSGAPGDILVFMPGQEDIEVTSEQIVEH 769
Query: 521 IKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVID 580
++ L K P L VLP+YS LPS++Q++IF+ AP G RK +VATNIAE SLT+DGI +VID
Sbjct: 770 LEELEK-APALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVID 828
Query: 581 PGFAKQNV 588
G+ K V
Sbjct: 829 SGYCKLKV 836
Score = 295 (108.9 bits), Expect = 1.9e-130, Sum P(3) = 1.9e-130
Identities = 59/135 (43%), Positives = 88/135 (65%)
Query: 664 LLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDL 723
L+ F + P+ L SA+ +S G + GL T G++M EFPLDP LSKML+ S D+
Sbjct: 851 LIEF-YGSEPAFHWLQSALLLPFSGGFIPPGGL-TSTGRQMVEFPLDPALSKMLIVSCDM 908
Query: 724 GCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQPEGDHLTLLAVYEAWKAKNFSL 783
GCS EIL I++M+ IF RP+ R+ ++D+ R +F PE DHLT L VY WK N+S
Sbjct: 909 GCSSEILLIVSMLSVPAIFYRPKGREEESDQVREKFAVPESDHLTYLNVYLQWKNNNYST 968
Query: 784 PWCGENFVNSRSLKK 798
WC ++F+++++++K
Sbjct: 969 LWCNQHFIHAKAMRK 983
Score = 42 (19.8 bits), Expect = 1.9e-130, Sum P(3) = 1.9e-130
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 75 HTILHPKPKLQSKKKSGRDRKTNYKAEFEN-DRER 108
H + + + KK+ RDR + K + E+ DR R
Sbjct: 145 HGVFASSKEKERKKEHSRDRGHDRKRDREDWDRSR 179
Score = 39 (18.8 bits), Expect = 4.0e-130, Sum P(3) = 4.0e-130
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 89 KSGRDRKTNYKAEFENDRERSGR 111
+ GRD + E + + +RSGR
Sbjct: 83 EEGRDEAGSPDEEEDEEEDRSGR 105
>POMBASE|SPAC2G11.11c [details] [associations]
symbol:prh1 "ATP-dependent RNA helicase Prh1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0042254 "ribosome
biogenesis" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
PomBase:SPAC2G11.11c GO:GO:0005524 EMBL:CU329670 GO:GO:0005730
GenomeReviews:CU329670_GR GO:GO:0006397 GO:GO:0042254 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K14781 OrthoDB:EOG4F7RTB EMBL:D13249 PIR:S35546 PIR:S62466
RefSeq:NP_593091.1 ProteinModelPortal:Q03319
EnsemblFungi:SPAC2G11.11c.1 GeneID:2541750 KEGG:spo:SPAC2G11.11c
OMA:MANDTTI NextBio:20802841 Uniprot:Q03319
Length = 719
Score = 1275 (453.9 bits), Expect = 5.7e-130, P = 5.7e-130
Identities = 252/519 (48%), Positives = 368/519 (70%)
Query: 282 IQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCTQ 341
I EQR++LPI++ + L Q + DN+V++++GETGSGK+TQ+ Q+L E Y +G + TQ
Sbjct: 89 ILEQRKNLPIWEAHDTLCQQIQDNRVIVVVGETGSGKSTQIPQFLNECPYAQEGCVAITQ 148
Query: 342 PRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLS 401
PRRVAA ++AKRVA E GCRLGE+VGY+IRF+D T T IKY+TDGMLLRE++ D LS
Sbjct: 149 PRRVAAVNLAKRVAAEQGCRLGEQVGYSIRFDDTTSKKTRIKYLTDGMLLRELINDPILS 208
Query: 402 QYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSI 461
QY ++LDEAHERT+ TD+L G +K+++K+RP LR+I+ SATL+AERFS +F I I
Sbjct: 209 QYHTLILDEAHERTLMTDMLLGFVKKIIKKRPALRVIIMSATLNAERFSEFFDGAEICYI 268
Query: 462 PGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEKI 521
GR +PV I+Y+ DYLD+ L T+ Q+H P GDIL+FLTGQ+EI+ A E+L +
Sbjct: 269 SGRQYPVQIHYTYTPEPDYLDACLRTIFQLHTKLPPGDILVFLTGQDEIE-ALEALIKSY 327
Query: 522 -KALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVID 580
K L ++P++ P++++LP E Q ++F PA RKVV++TNIAE S+TI GI YVID
Sbjct: 328 SKQLPSNLPQIQACPLFASLPQEQQLQVFLPALANHRKVVLSTNIAETSVTISGIRYVID 387
Query: 581 PGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTT 640
G AK +N K L+SL + PISQ++A+QR+GRAGR G+CYR+YTE+ + ++ T
Sbjct: 388 TGLAKIKQFNSKLGLESLTVQPISQSAAMQRSGRAGREAAGQCYRIYTEADF-DKLPKET 446
Query: 641 IPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLTKL 700
IPEI+RI+L LT+KA G N++++F ++DPPS + L+ A+E LYS+GALD+ G + L
Sbjct: 447 IPEIKRIDLSQAVLTLKARGQNDVINFHYMDPPSKEGLLRALEHLYSIGALDDNGHINDL 506
Query: 701 GKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFF 760
G +M+ PL P L++ +LA+ + C E++ +++ + T +F P+E++ +A E R +F
Sbjct: 507 GYQMSLIPLLPSLARAVLAAREHNCLSEVIDVVSCLSTDSMFLFPQEKRDEAIEARLKFL 566
Query: 761 QPEGDHLTLL-AVYEAWKAKNFSLP-WCGENFVNSRSLK 797
EGD LT L A+ + ++ + S WC +NF+N R+LK
Sbjct: 567 HSEGDLLTCLNALRQYLESSHDSRKQWCSQNFINRRALK 605
>UNIPROTKB|E1C094 [details] [associations]
symbol:E1C094 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AADN02054197 EMBL:AADN02054196
IPI:IPI00591998 Ensembl:ENSGALT00000001141 Uniprot:E1C094
Length = 1164
Score = 978 (349.3 bits), Expect = 1.3e-129, Sum P(3) = 1.3e-129
Identities = 214/428 (50%), Positives = 283/428 (66%)
Query: 171 PAFLQGQTRVSVDLSPVKVFKNPEGSLSRTAALQSALTKERREVREQQLR---------T 221
P FL G+ + PV K+ L+ A S L ++ RE +E++ T
Sbjct: 417 PPFLDGRIVFTKQPEPVIPVKDATSDLAIIARKGSQLVRKHREQKERKRAQHKHWELAGT 476
Query: 222 MIDSIPKDLNRPWEDPM-PETGERHLAQELRGVGLSARDMPEWKKNAYGKAFTFGQRSKL 280
+ I +D M E G+ E + A M E K A + F + K
Sbjct: 477 KLGDIMGIKKEEEKDEMVTEDGKVDYRTEQK----FAEHMKE-KSEARSE---FAK--KK 526
Query: 281 SIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCT 340
SI EQR+ LPIF ++ EL+ + DN ++I++GETGSGKTTQL QYL E GYT G IGCT
Sbjct: 527 SILEQRQYLPIFAVQQELLSILRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCT 586
Query: 341 QPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENL 400
QPRRVAA SVAKRV+EE G RLGEEVGYAIRFEDCT +T+IKYMTDG+LLRE L + +L
Sbjct: 587 QPRRVAAMSVAKRVSEEMGVRLGEEVGYAIRFEDCTSENTIIKYMTDGILLRESLREADL 646
Query: 401 SQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFS 460
YS I++DEAHER++NTDVLFGLL+++V RR DL+L+VTSAT+DA++F+ +F N IF
Sbjct: 647 DNYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLVVTSATMDADKFASFFGNVPIFH 706
Query: 461 IPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEK 520
IPGRTFPVDI +S+ DY+++A+ LQ+H+ GDIL+F+ GQE+I+ E + E
Sbjct: 707 IPGRTFPVDILFSKTPQEDYVEAAVKQALQVHLSGAPGDILVFMPGQEDIEVTSEQIVEH 766
Query: 521 IKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVID 580
++ L K P L VLP+YS LPS++Q++IF+ AP G RK +VATNIAE SLT+DGI +VID
Sbjct: 767 LEELEK-APALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVID 825
Query: 581 PGFAKQNV 588
G+ K V
Sbjct: 826 SGYCKLKV 833
Score = 287 (106.1 bits), Expect = 1.3e-129, Sum P(3) = 1.3e-129
Identities = 50/102 (49%), Positives = 73/102 (71%)
Query: 697 LTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKR 756
LT G++M EFPLDP LSKML+ S D+GCS EIL I++M+ IF RP+ R+ ++D+ R
Sbjct: 876 LTSTGRQMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQVR 935
Query: 757 ARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
+F PE DHLT L VY WK N+S WC ++F+++++++K
Sbjct: 936 EKFAVPESDHLTYLNVYLQWKNNNYSTLWCNQHFIHAKAMRK 977
Score = 42 (19.8 bits), Expect = 1.3e-129, Sum P(3) = 1.3e-129
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 75 HTILHPKPKLQSKKKSGRDRKTNYKAEFEN-DRER 108
H + + + KK+ RDR + K + E+ DR R
Sbjct: 142 HGVFASSKEKERKKEHSRDRGHDRKRDREDWDRSR 176
Score = 39 (18.8 bits), Expect = 2.8e-129, Sum P(3) = 2.8e-129
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 89 KSGRDRKTNYKAEFENDRERSGR 111
+ GRD + E + + +RSGR
Sbjct: 80 EEGRDEAGSPDEEEDEEEDRSGR 102
>UNIPROTKB|F5GXM6 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K13117 EMBL:AL023803
UniGene:Hs.444520 DNASU:60625 GeneID:60625 KEGG:hsa:60625 CTD:60625
HGNC:HGNC:15861 GenomeRNAi:60625 NextBio:65461 IPI:IPI00513682
RefSeq:NP_001177738.1 ProteinModelPortal:F5GXM6 SMR:F5GXM6
Ensembl:ENST00000373323 UCSC:uc010zwc.2 ArrayExpress:F5GXM6
Bgee:F5GXM6 Uniprot:F5GXM6
Length = 672
Score = 1230 (438.0 bits), Expect = 3.0e-129, Sum P(2) = 3.0e-129
Identities = 264/537 (49%), Positives = 362/537 (67%)
Query: 280 LSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKI-G 338
+SI E+R+SL +N V++ + I + + + +YLAEAG+T +G++ G
Sbjct: 20 VSISEERQSLA----ENSGTTVVYNPYAALSIEQ--QRQKLPVFKYLAEAGWTAEGRVVG 73
Query: 339 CTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGP-DTVIKYMTDGMLLREILID 397
TQPRRVAA +VA RVAEE G LG EVGY IRF+DCT T IK++TDGML+RE+++D
Sbjct: 74 VTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVD 133
Query: 398 ENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFN-- 455
L++YSVIMLDEAHERT+ TD+ GLLK++ K+R DLRLIV SATLDA++F FFN
Sbjct: 134 PLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRD-FFNQN 192
Query: 456 ---------CNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTG 506
C I ++ GRTFPVDI Y + V DY+ S + TV++IH E +GD+L FLTG
Sbjct: 193 ETSDPARDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVVKIHQTEGDGDVLAFLTG 252
Query: 507 QEEIDFACESLCEKIKALGKDVPE--LVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATN 564
QEE++ L E+ +AL + + L VLP+Y+ LPS Q ++FE RKV+VATN
Sbjct: 253 QEEVETVVSMLIEQARALARTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATN 312
Query: 565 IAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCY 624
+AE S+TI GI YVID GF K YNP+ ++ LV+ P+SQASA QRAGR GR+ GKCY
Sbjct: 313 VAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCY 372
Query: 625 RLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQ 684
RLYTE A+ ++ +T+PE+QR NL L +KA+GI+N+L F F+ PP Q+++ A+E
Sbjct: 373 RLYTEEAF-DKLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALEL 431
Query: 685 LYSLGALDEEGLLTK-LGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFT 743
LY+LG LD++ LT+ LG ++AEFPL+P +KMLL S + GCS EIL+I AM+Q +IF
Sbjct: 432 LYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFV 491
Query: 744 RPRERQAKADEKRARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKKTA 800
P +++ A +F EGDHLT+L +YEA+ N WC E+F+N + L + A
Sbjct: 492 VPPNQKSHAIRVHRKFAVEEGDHLTMLNIYEAFIKHNKDSKWCQEHFLNYKGLVRAA 548
Score = 59 (25.8 bits), Expect = 3.0e-129, Sum P(2) = 3.0e-129
Identities = 14/42 (33%), Positives = 24/42 (57%)
Query: 252 GVGLSARDMPEWKKNAYGKAFTFGQRSKLSIQEQRRSLPIFK 293
GV +S + +N+ G + + LSI++QR+ LP+FK
Sbjct: 19 GVSIS-EERQSLAENS-GTTVVYNPYAALSIEQQRQKLPVFK 58
>TAIR|locus:2197965 [details] [associations]
symbol:AT1G26370 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
IPI:IPI00532541 RefSeq:NP_173961.3 UniGene:At.15978
ProteinModelPortal:F4IE66 SMR:F4IE66 PRIDE:F4IE66
EnsemblPlants:AT1G26370.1 GeneID:839179 KEGG:ath:AT1G26370
OMA:ADISTNI Uniprot:F4IE66
Length = 717
Score = 825 (295.5 bits), Expect = 3.8e-129, Sum P(2) = 3.8e-129
Identities = 177/391 (45%), Positives = 252/391 (64%)
Query: 423 GLLKQLVKRR-PDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPVDINYSRQEVTDYL 481
G+LK R+ L+LI+ SA+LDA FS YF + GR FPVDI Y+ +DY+
Sbjct: 216 GVLKGYQGRKLSPLKLIIMSASLDARVFSEYFGGAKAVHVQGRQFPVDILYTVHPESDYV 275
Query: 482 DSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPVYSALP 541
D+ L+T+ QIH +E GDIL+FLTGQ+EI+ + E+++ + +D +L+ L ++SALP
Sbjct: 276 DATLVTIFQIHFEEKPGDILVFLTGQDEIESVERLVQERLQNIPEDKRKLLPLAIFSALP 335
Query: 542 SEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVIT 601
SE Q ++F PAP G RKV++ATNIAE S+TI GI YVIDPGF K Y+P + ++SL +
Sbjct: 336 SEQQMKVFAPAPTGFRKVILATNIAETSITIPGIRYVIDPGFVKARSYDPSKGMESLDVV 395
Query: 602 PISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGI 661
P S+A LQR+GRAGR GPGK +RLY E + ++ +T PEI+R NL + L +KA+GI
Sbjct: 396 PASKAQTLQRSGRAGREGPGKSFRLYPEREFE-KLEDSTKPEIKRCNLSNIILQLKALGI 454
Query: 662 NNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLTK-LGKKMAEFPLDPPLSKMLLAS 720
++++ FDF+D PS A+I A+ +L+SLGAL ++G L +G +M+ PL+P SK L+ +
Sbjct: 455 DDIVGFDFIDKPSRGAIIKALAELHSLGALADDGKLENPVGYQMSRLPLEPVYSKALILA 514
Query: 721 VDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQPEGDHLTLLAVY------- 773
C +E+L +A++ IF PRE++ +A + F EGDHLT L+VY
Sbjct: 515 NQFNCLEEMLITVAVLSVESIFYDPREKREEARTSKNHFASVEGDHLTYLSVYRESDEFL 574
Query: 774 EAWKA----KNFSL---PWCGENFVNSRSLK 797
E KA N WC EN+VNSRSLK
Sbjct: 575 EKRKAAGSGNNIDKIMKKWCKENYVNSRSLK 605
Score = 463 (168.0 bits), Expect = 3.8e-129, Sum P(2) = 3.8e-129
Identities = 91/160 (56%), Positives = 124/160 (77%)
Query: 274 FGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTT 333
F R K++ E RRSLPI ++ L++ V N +LI++GETGSGKTTQL Q+L AG+
Sbjct: 28 FSMRQKIA--EHRRSLPIASVEKRLVEEVQKNDILIIVGETGSGKTTQLPQFLYNAGFCR 85
Query: 334 KGK-IGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLR 392
+GK IG TQPRR+AA +VAKRVAEE +LG++VGY+IRF+D T T +KYMTDG+LLR
Sbjct: 86 EGKMIGITQPRRIAAVTVAKRVAEECEVQLGQKVGYSIRFDDTTSGSTRLKYMTDGLLLR 145
Query: 393 EILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRR 432
E L+D +LS+YSVI++DEAH+R+++TDVL LLK++ + R
Sbjct: 146 EALLDPHLSRYSVIIVDEAHDRSVHTDVLLALLKKIQRTR 185
>ASPGD|ASPL0000052850 [details] [associations]
symbol:AN1363 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K13117
EMBL:AACD01000018 OrthoDB:EOG4BGD47 RefSeq:XP_658967.1
EnsemblFungi:CADANIAT00001248 GeneID:2877144 KEGG:ani:AN1363.2
OMA:VAEEMRC Uniprot:Q5BDL7
Length = 670
Score = 1264 (450.0 bits), Expect = 8.4e-129, P = 8.4e-129
Identities = 269/536 (50%), Positives = 364/536 (67%)
Query: 281 SIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGK-IGC 339
S+ + LPI + K ++ V V I++G+TGSGKTTQL QYL +AG+ T+GK I
Sbjct: 14 SLYKPASLLPIARHKQSILYLVETYPVTIVVGQTGSGKTTQLPQYLDQAGWCTEGKAIAV 73
Query: 340 TQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDEN 399
TQPRRVAAT+VA RVAEE C+LGE+VGY+IRFED T T IK++TDGMLLRE L+D
Sbjct: 74 TQPRRVAATTVAARVAEEMRCKLGEDVGYSIRFEDRTSAMTRIKFLTDGMLLREALVDPL 133
Query: 400 LSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFF----- 454
LS+YSVIM+DEAHER+++TD+L G+LK+++KRRP+LR+IV+SATL AE F YF
Sbjct: 134 LSRYSVIMVDEAHERSLSTDILLGILKKILKRRPELRIIVSSATLQAEDFLRYFAGDESQ 193
Query: 455 ---------NCN-IFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFL 504
N I SI GR +PVD + +Y++ ++ TV IH+ E EGDIL+FL
Sbjct: 194 QGPNGEVGGNTGKIISIEGRMYPVDTLFLESAAENYVERSVKTVFDIHLQEGEGDILIFL 253
Query: 505 TGQEEIDFACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATN 564
TG+EEI+ A + + E+ L L+ LP+Y+ L ++ Q +FEPAP RKVVV+TN
Sbjct: 254 TGREEIETAIQLISERATTLHPKSQSLLPLPLYAGLTTDQQMYVFEPAPENTRKVVVSTN 313
Query: 565 IAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCY 624
IAEAS+TI+GI YV+D GFAK Y+P +++L PIS+A+A+QRAGRAGRT PGKC+
Sbjct: 314 IAEASVTINGIVYVVDCGFAKLRAYDPSTGIETLTAVPISKAAAVQRAGRAGRTKPGKCF 373
Query: 625 RLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQ 684
RLYT+ AY ++ TIPEIQR NL + +KA+GI+N++ FDF+ P +I A E
Sbjct: 374 RLYTQHAYE-QLPDATIPEIQRSNLAPVIMQLKALGIDNIVRFDFLTSPPADLVIRAFEL 432
Query: 685 LYSLGALDEEGLLTK-LGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQT-GHIF 742
LYSLGA+D+ LTK LG +MAE +DP ++K+LL++ GC EILTI AM+ G ++
Sbjct: 433 LYSLGAIDDYAKLTKPLGMRMAELAVDPMMAKVLLSAQSFGCLSEILTIAAMVSLQGAVW 492
Query: 743 TRPRERQAKADEKRARFFQPEGDHLTLLAVYEAW--KAKNFSLPWCGENFVNSRSL 796
+ + ++ R +F EGDHLT L VY+A+ K K S WC +N +N RSL
Sbjct: 493 VQHDGDKKSSESSRRKFAVEEGDHLTYLNVYQAFVTKGKKES-KWCRDNLLNYRSL 547
>TAIR|locus:2010549 [details] [associations]
symbol:AT1G27900 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007126 "meiosis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0010332 "response to gamma
radiation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0032204 "regulation of telomere
maintenance" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0042138 "meiotic DNA double-strand
break formation" evidence=RCA] [GO:0043247 "telomere maintenance in
response to DNA damage" evidence=RCA] [GO:0045132 "meiotic
chromosome segregation" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12818 EMBL:AY054692
EMBL:AY128718 IPI:IPI00545738 RefSeq:NP_564296.1 UniGene:At.25438
ProteinModelPortal:Q93Y16 SMR:Q93Y16 PaxDb:Q93Y16 PRIDE:Q93Y16
EnsemblPlants:AT1G27900.1 GeneID:839683 KEGG:ath:AT1G27900
TAIR:At1g27900 InParanoid:Q93Y16 OMA:NCRRFIV PhylomeDB:Q93Y16
ProtClustDB:CLSN2688039 ArrayExpress:Q93Y16 Genevestigator:Q93Y16
Uniprot:Q93Y16
Length = 700
Score = 1246 (443.7 bits), Expect = 6.8e-127, P = 6.8e-127
Identities = 240/518 (46%), Positives = 353/518 (68%)
Query: 288 SLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCTQPRRVAA 347
+LPI + + ++++ V N V+++IGETGSGK+TQL+Q L GYT G I TQPRRVAA
Sbjct: 3 NLPILQFEEKIVETVEKNSVVVIIGETGSGKSTQLSQILHRHGYTKSGVIAITQPRRVAA 62
Query: 348 TSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIM 407
SVA+RVA+E LGE+VGYAIRFED T T IKY+TDG+LLRE L + L YSVI+
Sbjct: 63 VSVARRVAQELDVPLGEDVGYAIRFEDRTTSKTRIKYLTDGVLLRESLSNPMLDDYSVII 122
Query: 408 LDEAHERTINTDVLFGLLKQLVK-RRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTF 466
LDEAHER++NTD+L GL+K+LV+ R + ++++TSATLD E+ S +F C + ++PG+ +
Sbjct: 123 LDEAHERSLNTDILLGLVKRLVRIRASNFKVLITSATLDGEKVSEFFSGCPVLNVPGKLY 182
Query: 467 PVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEKIKALGK 526
PV+I YS++ Y++S+L + IHV EPEGDIL+F+TGQ++I+ L EK+++L +
Sbjct: 183 PVEILYSKERPVSYIESSLKVAIDIHVREPEGDILIFMTGQDDIEKLVSRLEEKVRSLAE 242
Query: 527 -DVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAK 585
+ ++ P++ +LP E+Q R+F P PP R+ +V+TNIAE SLT+DG+ YVID G+ K
Sbjct: 243 GSCMDAIIYPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDSGYVK 302
Query: 586 QNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQ 645
Q YNP + SL + IS+ A QRAGRAGRT PGKCYRLY + YR + TIPEIQ
Sbjct: 303 QRQYNPSSGMFSLDVIQISKVQANQRAGRAGRTRPGKCYRLYPLAVYRDDFLDATIPEIQ 362
Query: 646 RINLVHTTLTMKAMGINNL--LSFDFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKK 703
R +L + L +K++ + ++ L FDF+D PS ++L A++QLY + A+DE G +T++G+
Sbjct: 363 RTSLAGSVLYLKSLDLPDIDILKFDFLDAPSSESLEDALKQLYFIDAIDENGAITRIGRT 422
Query: 704 MAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIF----TRPRERQAKADE-KRAR 758
M++ PL+P LS+ L+ + + GC + LT++AM+ ++P E++ K DE
Sbjct: 423 MSDLPLEPSLSRTLIEANETGCLSQALTVVAMLSAETTLLPARSKPSEKKRKHDEDSNLP 482
Query: 759 FFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSL 796
GDH+ LL ++E+W N+ WC EN + R +
Sbjct: 483 NGSGYGDHIQLLQIFESWDRTNYDPVWCKENGMQVRGM 520
>WB|WBGene00022056 [details] [associations]
symbol:Y67D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO081642 RefSeq:NP_497420.1
ProteinModelPortal:Q9BKQ8 SMR:Q9BKQ8 MINT:MINT-1068531
STRING:Q9BKQ8 PaxDb:Q9BKQ8 EnsemblMetazoa:Y67D2.6 GeneID:175308
KEGG:cel:CELE_Y67D2.6 UCSC:Y67D2.6 CTD:175308 WormBase:Y67D2.6
InParanoid:Q9BKQ8 KO:K13117 OMA:NIFVVPP NextBio:887600
Uniprot:Q9BKQ8
Length = 732
Score = 1241 (441.9 bits), Expect = 2.3e-126, P = 2.3e-126
Identities = 258/533 (48%), Positives = 354/533 (66%)
Query: 278 SKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGK- 336
+ L+IQ+QR LPIFK + ++ + +I++GETG GK+TQ+ Q+L EAG+ G+
Sbjct: 66 ASLNIQQQRIRLPIFKNRGHILYMCERYRTIIIVGETGCGKSTQVPQFLLEAGWAADGRQ 125
Query: 337 IGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILI 396
I TQPRRVA ++A RVAEE C LG +VGY +RF+D + DT +K+MTDG+LLREIL
Sbjct: 126 IVITQPRRVAVVTLATRVAEEKDCILGHDVGYTVRFDDVSDKDTKVKFMTDGLLLREILA 185
Query: 397 DENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYF-FN 455
D LS+YS+IM+DEAHER+ NTD+L GLL+++++ R DLR+IV+SATLDAE F +F N
Sbjct: 186 DPLLSKYSIIMIDEAHERSCNTDILLGLLRKIIQIRNDLRIIVSSATLDAELFKDFFEMN 245
Query: 456 ---------CNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTG 506
I S+ GRT PV +++++ V DY SA+ TV+ IH E GDIL+FLTG
Sbjct: 246 ETGNSDKDTAGIISVEGRTHPVAVHHTKTSVPDYCQSAVDTVINIHKHENPGDILVFLTG 305
Query: 507 QEEIDFACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIA 566
Q+E++ CE L E L K+ L V+P Y ALP+ Q + F+ P G RKVVVATNIA
Sbjct: 306 QDEVEDVCEKLRELAGNL-KNCDRLWVVPCYGALPAREQMKAFDSTPHGTRKVVVATNIA 364
Query: 567 EASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRL 626
EAS+TI GI YVID G+ K + +++L+ +S+ASA QRAGRAGR PGKCYRL
Sbjct: 365 EASITIPGICYVIDTGYVKLRAQHAANGVETLMRVTVSKASAEQRAGRAGRIRPGKCYRL 424
Query: 627 YTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLY 686
Y ES + + T+PEIQR + T L +KA+G+ N+ F ++ PP A+I+ +E LY
Sbjct: 425 YPESEFE-RFAEGTVPEIQRCQMASTILQLKALGVQNVHRFHYLSPPPSWAMINGLELLY 483
Query: 687 SLGALDEEGLLTK-LGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRP 745
+LGA+DE LT LG +MAEFPL P SK LL S + GCS E++TI+AM+Q +F P
Sbjct: 484 ALGAIDETSQLTSPLGLQMAEFPLPPMHSKCLLKSAEFGCSTEMVTIVAMMQIQDVFITP 543
Query: 746 RERQAKADEKRARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
++ +AD R +F EGDH+T+L V+ + S WC ++FVN R L +
Sbjct: 544 YRQRHQADVIRKKFAVEEGDHMTMLNVFTKFVENGRSKKWCSDHFVNYRGLMR 596
>UNIPROTKB|H9KZI9 [details] [associations]
symbol:LOC100858239 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00575 PROSITE:PS00690
PROSITE:PS50126 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 EMBL:AADN02006936
Ensembl:ENSGALT00000013764 OMA:CRERERG Uniprot:H9KZI9
Length = 692
Score = 1183 (421.5 bits), Expect = 2.4e-123, Sum P(2) = 2.4e-123
Identities = 231/408 (56%), Positives = 306/408 (75%)
Query: 101 EFENDRERSGRYCKSNPPMLKDMPVSRMGGVSGVLASNEYPRYDXXXXXGFASWAXXXXX 160
E E+D R + + P + + +M + VL+ E+P +D
Sbjct: 290 EVEDDTLERKRLTRISDP--EKWEIKQMIAAN-VLSKEEFPDFDEETGI-LPKVDDEEDE 345
Query: 161 XXXXXXXXXQPAFLQGQTRVSVDLSPVKVFKNPEGSLSRTAALQSALTKERREVREQQLR 220
+P FL+G T+ S+D+SP+K+ KNP+GSLS+ A +QSAL KERRE+++ Q
Sbjct: 346 DLEIELVEEEPPFLRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQSALAKERRELKQAQRE 405
Query: 221 TMIDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSARDMPEWKKNAYG--KAFTFGQRS 278
+DSIP LN W DP+P+ R +A +RG+G+ D+PEWKK+A+G KA ++G+++
Sbjct: 406 AEMDSIPMGLNTHWVDPLPDVDGRQIAANMRGIGMMPNDIPEWKKHAFGGNKA-SYGKKT 464
Query: 279 KLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIG 338
+LSI EQR SLPIF+LK +LIQAVHDNQ+LI+IGETGSGKTTQ+ QYLAEAGYT++GKIG
Sbjct: 465 QLSIIEQRESLPIFRLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIG 524
Query: 339 CTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDE 398
CTQPRRVAA SVAKRV+EEFGC LG+EVGY IRFEDCT P+TVIKYMTDGMLLRE LID
Sbjct: 525 CTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDP 584
Query: 399 NLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNI 458
+L+QY++IMLDEAHERTI+TDVLFGLLK+ V++R D++LIVTSATLDA +FS YF+ I
Sbjct: 585 DLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPI 644
Query: 459 FSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTG 506
F+IPGRT+PV+I Y+++ TDYLD++LITV+QIH+ EP G+ ++ + G
Sbjct: 645 FTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGEWIVMIHG 692
Score = 50 (22.7 bits), Expect = 2.4e-123, Sum P(2) = 2.4e-123
Identities = 16/58 (27%), Positives = 29/58 (50%)
Query: 66 LVRTLFNVIHTILHPKPKLQSKKKSGRDRKTNYKAEFENDRERSGRYCKSNPPMLKDM 123
L+ L +I T + P K + K+S + T K+E E +E C+ + P +++M
Sbjct: 5 LISNLLRLIQT-MRPPSKPSTSKES--EVVTKPKSEKERLKELFPALCRPDNPNVRNM 59
>UNIPROTKB|E1BYA5 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000182 "rDNA binding"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0045943 "positive regulation of
transcription from RNA polymerase I promoter" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AADN02025994
IPI:IPI00823199 Ensembl:ENSGALT00000002492 ArrayExpress:E1BYA5
Uniprot:E1BYA5
Length = 660
Score = 1205 (429.2 bits), Expect = 1.5e-122, P = 1.5e-122
Identities = 251/525 (47%), Positives = 347/525 (66%)
Query: 285 QRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCTQPRR 344
QRR LPIF+ + L+ + + +LIGETGSGKTTQ+ QYL EAG +G I TQPRR
Sbjct: 20 QRRELPIFQARGPLLSQLRGLECAVLIGETGSGKTTQIPQYLYEAGIGRQGIIAVTQPRR 79
Query: 345 VAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYS 404
VAA S+A RV++E LG+ VGY +RF+D T +T IK++TDGMLLRE + D L +YS
Sbjct: 80 VAAISLATRVSDEKRTELGKLVGYTVRFDDLTSDETRIKFLTDGMLLREAIGDPILRKYS 139
Query: 405 VIMLDEAHERTINTDVLFGLLKQLVKRRPDL-----RLIVTSATLDAERFSGYFFNCNIF 459
V++LDEAHERTI+TDVLFG++K K+R +L ++IV SAT+D ++FS YF +
Sbjct: 140 VVILDEAHERTIHTDVLFGVVKAAQKKRKELGKLPLKVIVMSATMDVDQFSQYFNGAPVL 199
Query: 460 SIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEG-DILLFLTGQEEIDFACESLC 518
+ GR P+ + Y++Q +DYL +AL++V QIH + P DIL+FLTGQEEI+ A C
Sbjct: 200 YLEGRQHPIQVFYTKQPQSDYLQAALVSVFQIHQEAPSSQDILVFLTGQEEIE-AMTKTC 258
Query: 519 EKI-KALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFY 577
I K L P++ V+P+Y++LP Q R+F+ AP G RKV+++TNIAE S+TI GI Y
Sbjct: 259 RDIAKHLPDGCPQMTVMPLYASLPYSQQLRVFQAAPKGCRKVILSTNIAETSITISGIKY 318
Query: 578 VIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMS 637
V+D G K YNP+ L+ L + +S+A A QR GRAGR G CYRLYTE + +
Sbjct: 319 VVDTGMVKAKKYNPEIGLEVLAVQRVSKAQAWQRTGRAGREDSGICYRLYTEDEFE-KFD 377
Query: 638 PTTIPEIQ---RINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEE 694
T+PEIQ R NL L + A+ I N+L+FDF+ PSP A+ +A+EQL LGA++++
Sbjct: 378 KMTVPEIQSLCRCNLASVLLQLLALRIPNILTFDFMSKPSPDAIQAAIEQLDLLGAVEQK 437
Query: 695 G---LLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAK 751
+LT LG+KMA FPL+P SK +L S C++EILTI++++ + P R+ +
Sbjct: 438 EDQLVLTPLGRKMAAFPLEPKFSKTILLSPKFHCTEEILTIVSLLSVDSVLYNPPARRDE 497
Query: 752 ADEKRARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSL 796
R +F EGDHLTLL VY A+K + + WC ENFVN R++
Sbjct: 498 VQSVRKKFISSEGDHLTLLNVYRAFKNVSGNKEWCKENFVNGRNM 542
>UNIPROTKB|Q9H6R0 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA] [GO:0000182
"rDNA binding" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CH471108 GO:GO:0005654
GO:GO:0005730 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0000182 GO:GO:0045943 HOVERGEN:HBG039428
EMBL:AK025625 EMBL:AK026944 EMBL:AK295074 EMBL:AC004148
EMBL:BC030017 EMBL:CR936655 IPI:IPI00302860 IPI:IPI00655950
RefSeq:NP_001186628.1 RefSeq:NP_064547.2 UniGene:Hs.250456
ProteinModelPortal:Q9H6R0 SMR:Q9H6R0 IntAct:Q9H6R0
PhosphoSite:Q9H6R0 DMDM:296434478 PRIDE:Q9H6R0
Ensembl:ENST00000225296 GeneID:56919 KEGG:hsa:56919 UCSC:uc002gbz.3
CTD:56919 GeneCards:GC17M005360 HGNC:HGNC:16718 MIM:614405
neXtProt:NX_Q9H6R0 PharmGKB:PA27220 InParanoid:Q9H6R0 OMA:APDYFRR
OrthoDB:EOG46Q6S1 PhylomeDB:Q9H6R0 ChiTaRS:DHX33 GenomeRNAi:56919
NextBio:62420 ArrayExpress:Q9H6R0 Bgee:Q9H6R0 CleanEx:HS_DHX33
Genevestigator:Q9H6R0 GermOnline:ENSG00000005100 Uniprot:Q9H6R0
Length = 707
Score = 1203 (428.5 bits), Expect = 2.4e-122, P = 2.4e-122
Identities = 248/530 (46%), Positives = 344/530 (64%)
Query: 281 SIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCT 340
+++ QRRSLPIF+ + +L+ + + +LIGETGSGKTTQ+ QYL E G + +G I T
Sbjct: 66 AVELQRRSLPIFQARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEGGISRQGIIAVT 125
Query: 341 QPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENL 400
QPRRVAA S+A RV++E LG+ VGY +RF+D T DT IK++TDGMLLRE + D L
Sbjct: 126 QPRRVAAISLATRVSDEKRTELGKLVGYTVRFDDVTSEDTRIKFLTDGMLLREAISDSLL 185
Query: 401 SQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDL-----RLIVTSATLDAERFSGYFFN 455
+YS ++LDEAHERTI+TDVLFG++K KRR +L ++IV SAT+D + FS YF
Sbjct: 186 RKYSCVILDEAHERTIHTDVLFGVVKAAQKRRKELGKLPLKVIVMSATMDVDLFSQYFNG 245
Query: 456 CNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEG-DILLFLTGQEEIDFAC 514
+ + GR P+ + Y++Q DYL +AL++V QIH + P DIL+FLTGQEEI+ A
Sbjct: 246 APVLYLEGRQHPIQVFYTKQPQNDYLHAALVSVFQIHQEAPSSQDILVFLTGQEEIE-AM 304
Query: 515 ESLCEKI-KALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTID 573
C I K L P ++VLP+Y++LP Q R+F+ AP G RKV+++TNIAE S+TI
Sbjct: 305 SKTCRDIAKHLPDGCPAMLVLPLYASLPYAQQLRVFQGAPKGYRKVIISTNIAETSITIT 364
Query: 574 GIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYR 633
GI YV+D G K YNP L+ L + +S+ A QR GRAGR G CYRLYTE +
Sbjct: 365 GIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFE 424
Query: 634 SEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGAL-- 691
+ T+PEIQR NL L + AM + N+L+FDF+ PSP + +A+ QL LGAL
Sbjct: 425 -KFDKMTVPEIQRCNLASVMLQLLAMKVPNVLTFDFMSKPSPDHIQAAIAQLDLLGALEH 483
Query: 692 -DEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQA 750
D++ LT +G+KMA FPL+P +K +L S C++EILTI++++ + P R+
Sbjct: 484 KDDQLTLTPMGRKMAAFPLEPKFAKTILMSPKFHCTEEILTIVSLLSVDSVLHNPPSRRE 543
Query: 751 KADEKRARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKKTA 800
+ R +F EGDH+TLL +Y +K + WC ENFVNS+++ A
Sbjct: 544 EVQGVRKKFISSEGDHMTLLNIYRTFKNLGGNKDWCKENFVNSKNMTLVA 593
>MGI|MGI:2445102 [details] [associations]
symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) box polypeptide 33"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000182 "rDNA binding" evidence=ISO;IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=ISO;IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IPI]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=ISO;IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2445102
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0000182
GO:GO:0045943 HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241
CTD:56919 OMA:APDYFRR ChiTaRS:DHX33 EMBL:AK035177 EMBL:BC052172
IPI:IPI00410764 RefSeq:NP_848144.3 UniGene:Mm.35399
ProteinModelPortal:Q80VY9 SMR:Q80VY9 PhosphoSite:Q80VY9
PRIDE:Q80VY9 Ensembl:ENSMUST00000108527 GeneID:216877
KEGG:mmu:216877 InParanoid:Q80VY9 NextBio:375442 Bgee:Q80VY9
CleanEx:MM_DHX33 Genevestigator:Q80VY9
GermOnline:ENSMUSG00000040620 Uniprot:Q80VY9
Length = 698
Score = 1201 (427.8 bits), Expect = 4.0e-122, P = 4.0e-122
Identities = 248/526 (47%), Positives = 343/526 (65%)
Query: 281 SIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCT 340
+++ QRRSLPIF+ + +L+ + + +LIGETGSGKTTQ+ QYL E G + +G I T
Sbjct: 57 ALELQRRSLPIFRARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEGGISRQGIIAVT 116
Query: 341 QPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENL 400
QPRRVAA S+A RV++E LG+ VGY +RFED T DT IK++TDGMLLRE + D L
Sbjct: 117 QPRRVAAISLATRVSDEKRTELGKLVGYTVRFEDVTSEDTRIKFLTDGMLLREAISDSLL 176
Query: 401 SQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDL-----RLIVTSATLDAERFSGYFFN 455
+YS ++LDEAHERTI+TDVLFG++K KRR +L ++IV SAT+D + FS YF
Sbjct: 177 RKYSCVILDEAHERTIHTDVLFGVVKTAQKRRKELGKLPLKVIVMSATMDVDLFSQYFNR 236
Query: 456 CNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEG-DILLFLTGQEEIDFAC 514
+ + GR P+ I Y++Q DYL +AL++V QIH + P DIL+FLTGQEEI+ A
Sbjct: 237 APVLYLEGRQHPIQIFYTKQPQQDYLHAALVSVFQIHQEAPASQDILVFLTGQEEIE-AM 295
Query: 515 ESLCEKI-KALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTID 573
C I + L P ++VLP+Y++LP Q R+F+ AP G RKV+++TNIAE S+TI
Sbjct: 296 SKTCRDIARHLPDGCPSMLVLPLYASLPYSQQLRVFQGAPKGYRKVIISTNIAETSITIT 355
Query: 574 GIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYR 633
GI YV+D G K YNP L+ L + +S+ A QR GRAGR G CYRLYTE +
Sbjct: 356 GIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFE 415
Query: 634 SEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGAL-- 691
+ T+PEIQR NL L + AM + N+L+FDF+ PSP + +A+ QL LGAL
Sbjct: 416 -KFEKMTVPEIQRCNLASVILQLLAMKVPNVLTFDFMSKPSPDHIEAAIAQLDLLGALEH 474
Query: 692 -DEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQA 750
D++ LT +G+KMA FPL+P +K +L S C++EILTI++++ + P R+
Sbjct: 475 KDDQLTLTPIGRKMAAFPLEPRFAKTILLSSKFHCTEEILTIVSLLSVDSVLYNPPARRD 534
Query: 751 KADEKRARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSL 796
+ R +F EGDH+TLL +Y +K + WC ENFVNS+++
Sbjct: 535 EVQSVRKKFISSEGDHITLLNIYRTFKNIGGNKDWCKENFVNSKNM 580
>UNIPROTKB|F1MWZ4 [details] [associations]
symbol:F1MWZ4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IEA] [GO:0033613 "activating
transcription factor binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0000182
"rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:DAAA02048722
IPI:IPI00693412 Ensembl:ENSBTAT00000016932 Uniprot:F1MWZ4
Length = 714
Score = 1198 (426.8 bits), Expect = 8.3e-122, P = 8.3e-122
Identities = 251/530 (47%), Positives = 343/530 (64%)
Query: 281 SIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCT 340
++++QRR+LPIF+ + +L+ + + +LIGETGSGKTTQ+ QYL E G + I T
Sbjct: 73 AVEQQRRNLPIFQARGQLLAQLRNLDSAVLIGETGSGKTTQIPQYLYEGGIGRQAIIAVT 132
Query: 341 QPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENL 400
QPRRVAA S+A RV++E LG+ VGY +RF+D T DT IK++TDGMLLRE + D L
Sbjct: 133 QPRRVAAISLATRVSDEKRTELGKLVGYTVRFDDVTSDDTKIKFLTDGMLLREAISDCLL 192
Query: 401 SQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDL-----RLIVTSATLDAERFSGYFFN 455
+YS I+LDEAHERT++TDVLFG++K KRR +L +++V SAT+D + FS YF
Sbjct: 193 RKYSCIILDEAHERTLHTDVLFGVVKAAQKRRKELGKLPLKVLVMSATMDVDLFSQYFNG 252
Query: 456 CNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEG-DILLFLTGQEEIDFAC 514
+ + GR P+ I Y++Q DYL +AL++V QIH + P DIL+FLTGQEEI+ A
Sbjct: 253 APVLYLEGRQHPIQIFYTKQPQHDYLHAALVSVFQIHQEAPSSHDILVFLTGQEEIE-AM 311
Query: 515 ESLCEKI-KALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTID 573
C I K L P ++VLP+Y++LP Q R+F+ AP G RKV+++TNIAE S+TI
Sbjct: 312 SKTCRDIAKHLPDGCPSMLVLPLYASLPYAQQLRVFQRAPKGYRKVIISTNIAETSITIT 371
Query: 574 GIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYR 633
GI YV+D G K YNP L+ L + +S+ A QR GRAGR G CYRLYTE +
Sbjct: 372 GIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFE 431
Query: 634 SEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDE 693
+ T+PEIQR NL L + AM I N+L+FDF+ PSP + +A+ QL LGAL+
Sbjct: 432 -KFEKMTVPEIQRCNLASVMLQLLAMKIPNVLTFDFMSKPSPDHIQAAIAQLELLGALEH 490
Query: 694 -EG--LLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQA 750
+G LT +G+KMA FPL+P +K +L S C++EILTI+A++ I P R+
Sbjct: 491 RDGQLTLTPMGRKMAAFPLEPKFAKTILLSPKFHCTEEILTIVALLSVDSILYNPPSRRD 550
Query: 751 KADEKRARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKKTA 800
+ R +F EGDHLTLL VY +K + WC ENFVNS+++ A
Sbjct: 551 EVQSVRKKFVSSEGDHLTLLNVYRTFKNTGGNKEWCKENFVNSKNMMLVA 600
>UNIPROTKB|Q5SQH5 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:CH471081 GO:GO:0003676 EMBL:BX119957 EMBL:CR753328
EMBL:CR759778 EMBL:AL732442 EMBL:BX908728 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
UniGene:Hs.485060 HGNC:HGNC:2739 EMBL:CR788240 EMBL:AL662798
EMBL:CU013522 IPI:IPI00644906 SMR:Q5SQH5 Ensembl:ENST00000376437
Ensembl:ENST00000414052 Ensembl:ENST00000445379
Ensembl:ENST00000449861 Ensembl:ENST00000451748
Ensembl:ENST00000453879 UCSC:uc003nqy.3 Uniprot:Q5SQH5
Length = 560
Score = 1195 (425.7 bits), Expect = 1.7e-121, P = 1.7e-121
Identities = 223/399 (55%), Positives = 299/399 (74%)
Query: 401 SQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFS 460
SQ V+M+DEAHERT++TD+LFGL+K + + RP+L+++V SAT+D RFS +F + +F
Sbjct: 31 SQLGVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDDAPVFR 90
Query: 461 IPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEK 520
IPGR FPVDI Y++ DYL++ +++VLQIHV +P GDIL+FLTGQEEI+ ACE L ++
Sbjct: 91 IPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDR 150
Query: 521 IKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVID 580
+ LG + EL+VLP+Y+ LPS++Q+RIF+P PPG RKVVVATNIAE SLTI+GI YV+D
Sbjct: 151 CRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLD 210
Query: 581 PGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTT 640
PGF KQ YNP+ ++SL +TP S+ASA QRAGRAGR GKC+RLYT AY+ E+ TT
Sbjct: 211 PGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETT 270
Query: 641 IPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLTKL 700
+PEIQR +L + L +K++GI++L+ FDF+DPP + L+ A+EQLY+LGAL+ G LT
Sbjct: 271 VPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLGELTTS 330
Query: 701 GKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGH-IFTRPRERQAKADEKRARF 759
G+KMAE P+DP LSKM+LAS CS+EILT+ AM+ + IF RP+++ AD R F
Sbjct: 331 GRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNF 390
Query: 760 FQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
F P GDHL LL VY W +S WC ENFV RS+++
Sbjct: 391 FLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRR 429
>UNIPROTKB|Q5JP46 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOVERGEN:HBG039428 UniGene:Hs.485060
HGNC:HGNC:2739 IPI:IPI00292510 SMR:Q5JP46 Ensembl:ENST00000383576
UCSC:uc011ijt.2 Uniprot:Q5JP46
Length = 560
Score = 1194 (425.4 bits), Expect = 2.2e-121, P = 2.2e-121
Identities = 223/399 (55%), Positives = 298/399 (74%)
Query: 401 SQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFS 460
SQ V+M+DEAHERT++TD+LFGL+K + + RP+L+++V SAT+D RFS +F +F
Sbjct: 31 SQLGVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDGAPVFR 90
Query: 461 IPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEK 520
IPGR FPVDI Y++ DYL++ +++VLQIHV +P GDIL+FLTGQEEI+ ACE L ++
Sbjct: 91 IPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDR 150
Query: 521 IKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVID 580
+ LG + EL+VLP+Y+ LPS++Q+RIF+P PPG RKVVVATNIAE SLTI+GI YV+D
Sbjct: 151 CRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLD 210
Query: 581 PGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTT 640
PGF KQ YNP+ ++SL +TP S+ASA QRAGRAGR GKC+RLYT AY+ E+ TT
Sbjct: 211 PGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETT 270
Query: 641 IPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLTKL 700
+PEIQR +L + L +K++GI++L+ FDF+DPP + L+ A+EQLY+LGAL+ G LT
Sbjct: 271 VPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLGELTTS 330
Query: 701 GKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGH-IFTRPRERQAKADEKRARF 759
G+KMAE P+DP LSKM+LAS CS+EILT+ AM+ + IF RP+++ AD R F
Sbjct: 331 GRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNF 390
Query: 760 FQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
F P GDHL LL VY W +S WC ENFV RS+++
Sbjct: 391 FLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRR 429
>GENEDB_PFALCIPARUM|PFL1525c [details] [associations]
symbol:PFL1525c "pre-mRNA splicing factor RNA
helicase, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0008380
"RNA splicing" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0005681
GO:GO:0003676 GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 682 (245.1 bits), Expect = 4.9e-120, Sum P(2) = 4.9e-120
Identities = 150/350 (42%), Positives = 221/350 (63%)
Query: 209 KERREVREQQLRTMIDSIPK-DLN-RPWEDPMPETGERHLAQELRGVGL-SARDMPEWKK 265
K + E ++++ M D D N R +E E E L + V L S M E K+
Sbjct: 352 KIKHEKKKKKKSIMTDEERNVDSNKRSFEKKESELNENGLTDVVEFVHLESFYGMNE-KE 410
Query: 266 NAYGKAFTFGQRSK----LSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQ 321
K F ++ K I ++R+ LPI+ + ++++A+ +N++LIL+GETGSGK+TQ
Sbjct: 411 KELEKLFEDIKKRKEKKMKKIIDERKRLPIYSYRYDILKAIKNNKILILVGETGSGKSTQ 470
Query: 322 LAQYLAEAGYTTKGKIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTV 381
L QYL E Y G I CTQPRR+A ++A RVAEE ++G+EVGY IRF++ T T
Sbjct: 471 LTQYLYECKYHMYGNIICTQPRRIACIAIANRVAEEMNVKIGKEVGYVIRFQNKTSEATK 530
Query: 382 IKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTS 441
I YMTDGM LR +L + L SV+++DEAHER ++TDV+ ++K + R ++R++++S
Sbjct: 531 IMYMTDGMFLRLLLYNPTLEDISVLIIDEAHERALHTDVILPIVKDICNFRENIRVVISS 590
Query: 442 ATLDAERFSGYFFNCN-IFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDI 500
ATLDAE+ S YF NC IF +PGR + VDI Y+ ++Y+ + +IT+LQIH+ + +GDI
Sbjct: 591 ATLDAEKISTYF-NCAPIFYVPGRKYNVDIYYTINNESNYISAIVITILQIHITQGKGDI 649
Query: 501 LLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFE 550
L+FL GQ EI+ + L K+ L LV+LP+YS+LP E Q+RIFE
Sbjct: 650 LVFLPGQYEIELVQQELENKLNELAPKYRNLVILPIYSSLPVEYQARIFE 699
Score = 536 (193.7 bits), Expect = 4.9e-120, Sum P(2) = 4.9e-120
Identities = 106/245 (43%), Positives = 163/245 (66%)
Query: 557 RKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAG 616
RK++++TNI E S+TID I YVID G KQ +YNP ++SLV P S+AS QR GRAG
Sbjct: 803 RKIILSTNICETSITIDNIVYVIDSGLCKQKIYNPNSGIESLVTLPCSKASVNQRTGRAG 862
Query: 617 RTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQ 676
R GKC+RL+T+ ++ ++S +IPEIQR + L +K++G++++++FDF+DPPSP
Sbjct: 863 RKRDGKCFRLFTKKSF-IDLSDNSIPEIQRCEISSMILLLKSLGMDDIINFDFLDPPSPI 921
Query: 677 ALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVD-LGCSDEILTIIAM 735
+I +E LYSLGAL++EG LT+ G+KMAEFP D SKM+L++ + C DEIL + +M
Sbjct: 922 VIIKGLELLYSLGALNDEGNLTRTGRKMAEFPTDVKSSKMILSAAEKYNCVDEILNVASM 981
Query: 736 I-QTGHIFTRPRERQAKADEKRARFF-QPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNS 793
+ +IF + ++ +A+ + F + GD L L +Y+ + NFS +C ++F+
Sbjct: 982 LTHANNIFYVQKGKEKEAENIKKMFIIEGGGDFLLFLNIYKQCEENNFSTSFCYDHFLQY 1041
Query: 794 RSLKK 798
+L K
Sbjct: 1042 HTLIK 1046
>UNIPROTKB|Q8I5A4 [details] [associations]
symbol:PFL1525c "Pre-mRNA splicing factor RNA helicase,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008380 GO:GO:0005681 GO:GO:0003676
GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 682 (245.1 bits), Expect = 4.9e-120, Sum P(2) = 4.9e-120
Identities = 150/350 (42%), Positives = 221/350 (63%)
Query: 209 KERREVREQQLRTMIDSIPK-DLN-RPWEDPMPETGERHLAQELRGVGL-SARDMPEWKK 265
K + E ++++ M D D N R +E E E L + V L S M E K+
Sbjct: 352 KIKHEKKKKKKSIMTDEERNVDSNKRSFEKKESELNENGLTDVVEFVHLESFYGMNE-KE 410
Query: 266 NAYGKAFTFGQRSK----LSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQ 321
K F ++ K I ++R+ LPI+ + ++++A+ +N++LIL+GETGSGK+TQ
Sbjct: 411 KELEKLFEDIKKRKEKKMKKIIDERKRLPIYSYRYDILKAIKNNKILILVGETGSGKSTQ 470
Query: 322 LAQYLAEAGYTTKGKIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTV 381
L QYL E Y G I CTQPRR+A ++A RVAEE ++G+EVGY IRF++ T T
Sbjct: 471 LTQYLYECKYHMYGNIICTQPRRIACIAIANRVAEEMNVKIGKEVGYVIRFQNKTSEATK 530
Query: 382 IKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTS 441
I YMTDGM LR +L + L SV+++DEAHER ++TDV+ ++K + R ++R++++S
Sbjct: 531 IMYMTDGMFLRLLLYNPTLEDISVLIIDEAHERALHTDVILPIVKDICNFRENIRVVISS 590
Query: 442 ATLDAERFSGYFFNCN-IFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDI 500
ATLDAE+ S YF NC IF +PGR + VDI Y+ ++Y+ + +IT+LQIH+ + +GDI
Sbjct: 591 ATLDAEKISTYF-NCAPIFYVPGRKYNVDIYYTINNESNYISAIVITILQIHITQGKGDI 649
Query: 501 LLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFE 550
L+FL GQ EI+ + L K+ L LV+LP+YS+LP E Q+RIFE
Sbjct: 650 LVFLPGQYEIELVQQELENKLNELAPKYRNLVILPIYSSLPVEYQARIFE 699
Score = 536 (193.7 bits), Expect = 4.9e-120, Sum P(2) = 4.9e-120
Identities = 106/245 (43%), Positives = 163/245 (66%)
Query: 557 RKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAG 616
RK++++TNI E S+TID I YVID G KQ +YNP ++SLV P S+AS QR GRAG
Sbjct: 803 RKIILSTNICETSITIDNIVYVIDSGLCKQKIYNPNSGIESLVTLPCSKASVNQRTGRAG 862
Query: 617 RTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQ 676
R GKC+RL+T+ ++ ++S +IPEIQR + L +K++G++++++FDF+DPPSP
Sbjct: 863 RKRDGKCFRLFTKKSF-IDLSDNSIPEIQRCEISSMILLLKSLGMDDIINFDFLDPPSPI 921
Query: 677 ALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVD-LGCSDEILTIIAM 735
+I +E LYSLGAL++EG LT+ G+KMAEFP D SKM+L++ + C DEIL + +M
Sbjct: 922 VIIKGLELLYSLGALNDEGNLTRTGRKMAEFPTDVKSSKMILSAAEKYNCVDEILNVASM 981
Query: 736 I-QTGHIFTRPRERQAKADEKRARFF-QPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNS 793
+ +IF + ++ +A+ + F + GD L L +Y+ + NFS +C ++F+
Sbjct: 982 LTHANNIFYVQKGKEKEAENIKKMFIIEGGGDFLLFLNIYKQCEENNFSTSFCYDHFLQY 1041
Query: 794 RSLKK 798
+L K
Sbjct: 1042 HTLIK 1046
>FB|FBgn0031631 [details] [associations]
symbol:CG3225 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0016779 GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP
EMBL:AY069418 RefSeq:NP_608860.1 UniGene:Dm.300 SMR:Q9VR29
DIP:DIP-18193N IntAct:Q9VR29 MINT:MINT-288733
EnsemblMetazoa:FBtr0077416 GeneID:33680 KEGG:dme:Dmel_CG3225
UCSC:CG3225-RA FlyBase:FBgn0031631 InParanoid:Q9VR29
OrthoDB:EOG4H189P GenomeRNAi:33680 NextBio:784751 Uniprot:Q9VR29
Length = 678
Score = 1177 (419.4 bits), Expect = 1.4e-119, P = 1.4e-119
Identities = 253/537 (47%), Positives = 355/537 (66%)
Query: 271 AFTFGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAG 330
AF F + + EQR LPI + +++++ + +QV+IL+GETGSGK+TQ+ QYL E G
Sbjct: 29 AFVFNVNHNMGLMEQRERLPIRQYRDQILYCLEKHQVVILVGETGSGKSTQVPQYLYEWG 88
Query: 331 YTTKGKIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGML 390
+ TKG IG T+PRRV+ ++A RVA+E G +G+ VGY +RF + T IK+MT+G+L
Sbjct: 89 WHTKGLIGITEPRRVSTVTLANRVAQERGELVGDTVGYVVRFLESMSSCTKIKFMTEGIL 148
Query: 391 LREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFS 450
LRE+L D L+QY VI++DEAHER + TD++ GLLK+++++R L+LI++SAT+DA FS
Sbjct: 149 LREVLADPLLTQYGVIIVDEAHERNMLTDMILGLLKKILRKRSSLKLIISSATIDASFFS 208
Query: 451 GYFF-----NCNI-FSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFL 504
+F ++ SI GR PV Y + DY+ + TV ++H EP GDIL FL
Sbjct: 209 EFFSWPGSGEVSVKLSIEGRMHPVSNFYLNEPCADYVKETVETVWKLHQKEPPGDILAFL 268
Query: 505 TGQEEIDFACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATN 564
TGQEE+ A + L E I + ++ L VLP+Y ++ S Q +F P G RKVV+ATN
Sbjct: 269 TGQEEVLEALDLLREYIASSEQE--NLKVLPMYGSMSSTDQLSVFFTPPKGTRKVVLATN 326
Query: 565 IAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCY 624
IAE S+TI GI YVID G+ K YNPK DSLVI P+S+ASA+QRAGRAGR PGK Y
Sbjct: 327 IAETSITIPGIVYVIDCGYVKVKWYNPKTCSDSLVIVPVSKASAIQRAGRAGRMRPGKVY 386
Query: 625 RLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQ 684
RLYT+S Y + ++P PE++R L L +KA+GI N+L FDF PP Q L+SA+E
Sbjct: 387 RLYTKSDYEA-LAPRQPPEMRRSELSGAILQLKALGIGNILRFDFPSPPPAQNLLSALES 445
Query: 685 LYSLGALDEEGLLTK-LGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFT 743
L++L A+DE+G LTK +G +AE P LSKML S +GCS+EI+TIIA++Q IF+
Sbjct: 446 LFALDAIDEQGNLTKPVGYLLAELPFSAMLSKMLYVSGQMGCSEEIITIIALLQVQSIFS 505
Query: 744 RPRERQAKADEKRA-RFFQ-PEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
RP A+ + A R F+ EGD +T+L Y + + + +CG+ F+ R+LK+
Sbjct: 506 RPASAVAQQSGRIAHRKFEVAEGDFITMLNAYTGFVEEGMTKEFCGQYFLIYRNLKR 562
>UNIPROTKB|F1PRA1 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045943 "positive regulation of transcription
from RNA polymerase I promoter" evidence=IEA] [GO:0033613
"activating transcription factor binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0000182 "rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AAEX03003580
Ensembl:ENSCAFT00000024626 Uniprot:F1PRA1
Length = 616
Score = 1159 (413.0 bits), Expect = 1.1e-117, P = 1.1e-117
Identities = 241/501 (48%), Positives = 325/501 (64%)
Query: 310 LIGETGSGKTTQLAQYLAEAGYTTKGKIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYA 369
L GETGSGKTTQL QYL E G +G I TQPRRVAA S+A RV++E LG+ VGY
Sbjct: 4 LSGETGSGKTTQLPQYLYEGGIGRQGVIAVTQPRRVAAISLATRVSDEKRTELGKLVGYT 63
Query: 370 IRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLV 429
+RF+D + DT IK++TDGMLLRE + D L +YS I+LDEAHERT++TDVLFG++K
Sbjct: 64 VRFDDVSSEDTRIKFLTDGMLLREAISDSLLRKYSCIILDEAHERTVHTDVLFGVVKAAQ 123
Query: 430 KRRPDLR-----LIVTSATLDAERFSGYFFNCNIFSIPGRTFPVDINYSRQEVTDYLDSA 484
+RR +LR +IV SAT+D + FS YF ++ + GR P+ + Y++Q DYL +A
Sbjct: 124 RRRKELRKLPLKVIVMSATMDVDLFSQYFNGASVLYLEGRQHPIQVFYTKQPQQDYLHAA 183
Query: 485 LITVLQIHVDEPEG-DILLFLTGQEEIDFACESLCEKI-KALGKDVPELVVLPVYSALPS 542
L++V QIH + P DIL+FLTGQEEI+ A C I K L P ++VLP+Y++LP
Sbjct: 184 LVSVFQIHQEAPSSQDILVFLTGQEEIE-AVSKTCRDIAKHLPDGCPSMLVLPLYASLPY 242
Query: 543 EIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITP 602
Q R+F+ AP G RKV++ATNIAE S+TI GI YV+D G K YNP L+ L +
Sbjct: 243 AQQLRVFQGAPKGCRKVIIATNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQR 302
Query: 603 ISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGIN 662
+S+ A QRAGRAGR G CYRLYTE+ + + T+PEIQR NL L + AM +
Sbjct: 303 VSKTQAWQRAGRAGREDSGICYRLYTENEFE-KFEKMTVPEIQRCNLASVLLQLLAMKVP 361
Query: 663 NLLSFDFVDPPSPQALISAMEQLYSLGAL---DEEGLLTKLGKKMAEFPLDPPLSKMLLA 719
N+L+FDF+ PSP + +A+ QL LGAL D + LT +G+KMA FPL+P +K +L
Sbjct: 362 NVLTFDFMSKPSPDHMQAAVAQLDLLGALERKDNQLTLTPIGRKMAAFPLEPKFAKTILL 421
Query: 720 SVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQPEGDHLTLLAVYEAWKAK 779
S C++EILTI++++ + P R+ + R +F EGDH+TLL +Y +K+
Sbjct: 422 SPKFHCTEEILTIVSLLSVDSVLYNPPSRRDEVQAMRKKFLSSEGDHITLLNIYRTFKSL 481
Query: 780 NFSLPWCGENFVNSRSLKKTA 800
WC ENFVNSR++ A
Sbjct: 482 GGDKDWCRENFVNSRNMMLAA 502
>UNIPROTKB|G4MKC3 [details] [associations]
symbol:MGG_02518 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:CM001231 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K13117 RefSeq:XP_003709326.1 EnsemblFungi:MGG_02518T0
GeneID:2681615 KEGG:mgr:MGG_02518 Uniprot:G4MKC3
Length = 671
Score = 1152 (410.6 bits), Expect = 6.2e-117, P = 6.2e-117
Identities = 236/481 (49%), Positives = 329/481 (68%)
Query: 337 IGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILI 396
IG TQPRR+AAT+VA RVAEE+G +G+EVGY+IRFED T T IK++TDG+L+RE L+
Sbjct: 70 IGVTQPRRIAATTVALRVAEEYGSEVGKEVGYSIRFEDVTSEATRIKFLTDGLLIREALV 129
Query: 397 DENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNC 456
D LS+YS++M+DEAHER+++TD+L GLLK++ K+RP+LR+I++SATL AE+F +F +
Sbjct: 130 DPLLSRYSIVMVDEAHERSVSTDILLGLLKKIRKKRPELRIIISSATLQAEQFLAFFSST 189
Query: 457 ----------------NIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDI 500
I S+ GRT+P+DI Y DYL A+ TVL +H +EP+GDI
Sbjct: 190 LGGSRQDREEPQGTIGTIVSLEGRTYPIDILYLESPAEDYLQRAVSTVLDVHENEPDGDI 249
Query: 501 LLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVV 560
L+FLTG++EI+ A +++ E+ L L+ LP++S L +E Q IFE AP RKV+
Sbjct: 250 LVFLTGRDEIEAAVDAVSERTAHLTSQDRGLLPLPLFSGLSTEQQMYIFEEAPANTRKVI 309
Query: 561 VATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGP 620
+TNIAEAS+TI GI YV+D GF K YNPK +++L PIS+A+A QRAGRAGRT P
Sbjct: 310 FSTNIAEASVTISGIVYVVDSGFVKLRAYNPKTGIETLTAVPISKAAAAQRAGRAGRTKP 369
Query: 621 GKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALIS 680
GKC+RLYTE +Y S +S T IPE+QR NL L +KA+GI+N+L FDF+ PP + +
Sbjct: 370 GKCFRLYTEESYTS-LSDTNIPEVQRSNLAPFILQLKALGIDNVLHFDFLTPPPAELMTK 428
Query: 681 AMEQLYSLGALDEEGLLTK-LGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTG 739
A+E LYSLGALD+ LTK LG +MAE +DP ++K LL++ GC E+LTI AM G
Sbjct: 429 ALELLYSLGALDDYAKLTKPLGLRMAELAVDPMMAKTLLSAESFGCLSEMLTIAAMTSAG 488
Query: 740 -HIFTRPRERQAKADEKRARFFQPEGDHLTLLAVYEAWKAKNFSLP-WCGENFVNSRSLK 797
++ + + + + +R +F EGDHLT L VY+A+ K +C EN +N +++
Sbjct: 489 GDVWIQHEGERKQFESRRRKFAAGEGDHLTFLNVYQAFVTKGRKESGFCHENLLNYKTMS 548
Query: 798 K 798
+
Sbjct: 549 R 549
Score = 511 (184.9 bits), Expect = 1.4e-48, P = 1.4e-48
Identities = 95/166 (57%), Positives = 135/166 (81%)
Query: 289 LPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGK-IGCTQPRRVAA 347
LPI + K+ L+ V N V +++G+TGSGKTTQ+ Q+L +AG+ + GK IG TQPRR+AA
Sbjct: 21 LPIARHKDSLLYVVESNPVTVVVGQTGSGKTTQIPQFLEKAGWCSDGKLIGVTQPRRIAA 80
Query: 348 TSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIM 407
T+VA RVAEE+G +G+EVGY+IRFED T T IK++TDG+L+RE L+D LS+YS++M
Sbjct: 81 TTVALRVAEEYGSEVGKEVGYSIRFEDVTSEATRIKFLTDGLLIREALVDPLLSRYSIVM 140
Query: 408 LDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYF 453
+DEAHER+++TD+L GLLK++ K+RP+LR+I++SATL AE+F +F
Sbjct: 141 VDEAHERSVSTDILLGLLKKIRKKRPELRIIISSATLQAEQFLAFF 186
>DICTYBASE|DDB_G0269306 [details] [associations]
symbol:dhx35 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0269306 GO:GO:0005524
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K13117 OMA:NIFVVPP
RefSeq:XP_645858.1 ProteinModelPortal:Q55EC3
EnsemblProtists:DDB0233419 GeneID:8616802 KEGG:ddi:DDB_G0269306
InParanoid:Q55EC3 Uniprot:Q55EC3
Length = 716
Score = 732 (262.7 bits), Expect = 6.0e-116, Sum P(2) = 6.0e-116
Identities = 156/357 (43%), Positives = 222/357 (62%)
Query: 458 IFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESL 517
I SI GRT+PVDI+Y + ++Y+ + + T++ IH +P GDIL+FLTGQEEI+ ++L
Sbjct: 247 ILSIEGRTYPVDIHYLEESTSNYIQTTIQTIIDIHTTQPPGDILVFLTGQEEIEKLIQTL 306
Query: 518 CEKIKALGK---------DVP--ELVVLPVYSALPSEIQSRIFEPAPPGG--RKVVVATN 564
+K + L + P + +LP+YS L Q ++FE RK++++TN
Sbjct: 307 DDKFEILRQYHQQHHHQQQQPFMKYSLLPMYSGLSINKQIKVFESVGDSKKIRKIIISTN 366
Query: 565 IAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCY 624
IAE S+TIDG+ YV+D GF K Y+ + L+SLVI P S++SA QRAGRAGR+ GKCY
Sbjct: 367 IAETSITIDGVVYVVDCGFVKIKSYDSESGLESLVIVPTSKSSANQRAGRAGRSRAGKCY 426
Query: 625 RLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQ 684
RLYTE Y + TIPEIQR NL +T L +KA+GI+N+L+FDF+ P +LI +E
Sbjct: 427 RLYTELTYEKLLPDQTIPEIQRSNLTNTILQLKALGIDNILNFDFISQPPSSSLIRGLEV 486
Query: 685 LYSLGALDEEGLLTK-LGKKMAEFPLDPPLSKMLLASVDLG--CSDEILTIIAMIQTGHI 741
LY LGALD+ G LT G MAEFP DP SKM++ S G CSDE +TI AM+ +
Sbjct: 487 LYGLGALDDNGKLTNPTGMIMAEFPTDPTFSKMIIQSSSNGFNCSDECITITAMLNIQGL 546
Query: 742 FTRPRERQAKADEKRARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
FT + K EGDHLTLL ++ ++ + S WC ++ +N +++++
Sbjct: 547 FTNQNHKSRK------HLLVKEGDHLTLLNIFNSFISNQSSPQWCNQHQINYKAMQR 597
Score = 431 (156.8 bits), Expect = 6.0e-116, Sum P(2) = 6.0e-116
Identities = 94/199 (47%), Positives = 140/199 (70%)
Query: 272 FTFGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGY 331
F + KL+IQ+QR SLPI++ + ++ + L++IG TG GK+TQ+ QYL E+G+
Sbjct: 38 FIYNSNQKLTIQQQRISLPIYQNRKHILYLLEKYSTLVIIGNTGCGKSTQIPQYLFESGW 97
Query: 332 TTKGK-IGCTQPRRVAATSVAKRVAEEFGCR-LGEEVGYAIRFED-CTGPDTVIKYMTDG 388
+ + I CTQPRRVAA S+A+RVA+E G + +G+ VGY++RF++ + +T IKY+TDG
Sbjct: 98 SDGFRTILCTQPRRVAAISLAERVAQEMGEQHVGKTVGYSVRFDEKISDIETRIKYVTDG 157
Query: 389 MLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPD----------LRLI 438
ML+RE+++D L +YSVIM+DEAHER++ TD+L GLLK++ K+R L+LI
Sbjct: 158 MLIREMMLDPLLLKYSVIMIDEAHERSLQTDLLMGLLKKVQKKRNSTNNNNNNDNSLKLI 217
Query: 439 VTSATLDAERFSGYFFNCN 457
++SATL+A F FFN N
Sbjct: 218 ISSATLNANDFFN-FFNYN 235
>CGD|CAL0002969 [details] [associations]
symbol:orf19.107 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0002969 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14781 EMBL:AACQ01000106 RefSeq:XP_714316.1
GeneID:3644014 KEGG:cal:CaO19.107 Uniprot:Q59XP9
Length = 831
Score = 1099 (391.9 bits), Expect = 2.6e-111, P = 2.6e-111
Identities = 239/542 (44%), Positives = 351/542 (64%)
Query: 258 RDMPEWKKNAYGKAFTFGQRS-KLSIQEQ-----RRSLPIFKLKNELIQAVHDNQVLILI 311
+D + F F Q S +L+ Q R LPI+ K+++I+ +++NQV I+I
Sbjct: 145 KDQDDEDDEEENNTFNFSQNSFQLAATAQQLLQIREKLPIYHHKDKIIEYINNNQVTIVI 204
Query: 312 GETGSGKTTQLAQYLAEAGYTTKGKIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIR 371
GETGSGK+TQ+ Q+L K IG TQPRRVAA S+A RV+EE+GC+LG++VGY +R
Sbjct: 205 GETGSGKSTQIPQFLMPEN--PK-MIGVTQPRRVAAASLAARVSEEYGCKLGQDVGYQVR 261
Query: 372 FEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVK- 430
F + T T +KY+TDGMLLREI++D NL++YS I+LDEAHERTI TD++ G LKQ++
Sbjct: 262 FTNMTNRQTKLKYLTDGMLLREIMLDSNLTKYSTIILDEAHERTILTDLIMGFLKQIITS 321
Query: 431 -RRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPVDINYSRQEVTDYLDSALITVL 489
+R DL+++V SATL+AE FS +F N I I G+ +PV Y E D +D+ + +++
Sbjct: 322 GKRKDLKIVVMSATLNAELFSNFFGNAPILYIEGKMYPVSQFYLDAESEDIVDTMIRSII 381
Query: 490 QIHVDEPEGDILLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIF 549
QI+++EPEGD+L FL GQEEID +SL + L ++ P +V LP+Y+AL QS+IF
Sbjct: 382 QINLNEPEGDVLCFLPGQEEIDNCVKSLEQLAPQLPREAPLIVPLPLYAALSPGQQSKIF 441
Query: 550 EPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASAL 609
E P G RKV++ATNIAE S+T+ G+ YVID G K V+ L +L+ TPISQASA
Sbjct: 442 EKLPKGRRKVILATNIAETSITVSGVKYVIDSGLRKIKVWKHNLGLSTLLTTPISQASAR 501
Query: 610 QRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDF 669
QRAGRAGR GK +RLY ES Y + + EI+R +++ LT+K +G+++LL++ +
Sbjct: 502 QRAGRAGRESEGKVFRLYPESTYMA-LPKQQESEIKRNDIILPVLTLKKLGVDDLLNWSW 560
Query: 670 VDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEI 729
++ P A++SA+ LY+LGAL++ G +T LG KM+ PL P LS +L+ + + G +
Sbjct: 561 LEYPGQDAILSALNTLYTLGALNDSGKVTTLGYKMSILPLPPQLSVVLITAAEFGVLSPV 620
Query: 730 LTIIAMIQTGHIFTRPR-ERQAKADEKRARFFQPEGD-HLTLLAVYEAWKAKNFS-LPWC 786
+ I + + ++ T E + + + KR R P G+ H L+A+YE ++A WC
Sbjct: 621 IDIASCLSVDNLITNVTGEARDEINFKR-RQHCPLGNIHGDLIALYEYFQAYQAQGKEWC 679
Query: 787 GE 788
E
Sbjct: 680 KE 681
>FB|FBgn0032194 [details] [associations]
symbol:CG4901 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000390 "spliceosomal complex disassembly" evidence=ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0004386
"helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AY113491
RefSeq:NP_609356.2 UniGene:Dm.10854 SMR:Q9VL25 MINT:MINT-898830
STRING:Q9VL25 EnsemblMetazoa:FBtr0079947 GeneID:34357
KEGG:dme:Dmel_CG4901 UCSC:CG4901-RA FlyBase:FBgn0032194
InParanoid:Q9VL25 OrthoDB:EOG4MW6N5 GenomeRNAi:34357 NextBio:788096
Uniprot:Q9VL25
Length = 694
Score = 1094 (390.2 bits), Expect = 8.7e-111, P = 8.7e-111
Identities = 232/530 (43%), Positives = 335/530 (63%)
Query: 279 KLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIG 338
+ SI++Q++SLP+F ++ +++ + N ++++ ETGSGKTTQ+ Q+L AGY G IG
Sbjct: 58 RTSIEQQQKSLPVFNCRHRILKELEANDTVLIMSETGSGKTTQIPQFLLLAGYAKNGMIG 117
Query: 339 CTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDE 398
TQPRRVAA +VA+RVA+E +G+ VGY +RFED T T I+++TDG+LLRE + D
Sbjct: 118 ITQPRRVAAITVARRVAQELNGTIGDTVGYTVRFEDVTSRATKIRFLTDGVLLRESIKDR 177
Query: 399 NLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRR-----PDLRLIVTSATLDAERFSGYF 453
L +YSVI+LDEAHERT+N D+LFG++K K R +L+++VTSAT+D + F YF
Sbjct: 178 LLLKYSVIILDEAHERTVNADLLFGIVKDAQKERRKQKLANLKVVVTSATMDIDHFGNYF 237
Query: 454 FNCNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEG-DILLFLTGQEEIDF 512
NC + GRT+PV + ++++E DY+ + L+T+ IH P+ D+L+FLTGQEEI
Sbjct: 238 -NCKGMYLEGRTYPVRVMHTKEEHEDYIHTVLVTLFHIHRTTPKNHDVLIFLTGQEEI-- 294
Query: 513 ACESLCEKIKALGK-DVP---ELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEA 568
ESL ++I+ L K D +L V +Y+ L Q F P P RKV++ATNIAE
Sbjct: 295 --ESLAQQIRQLAKIDTTGTTDLRVFTLYAQLSQGKQLECFVPTPANVRKVILATNIAET 352
Query: 569 SLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYT 628
S+TI GI VID GF K+ +N LD L IS+A A QRAGRAGR G CYR YT
Sbjct: 353 SITIPGIRCVIDCGFVKEKSFNTVDGLDVLKSVRISKAQAWQRAGRAGRDADGTCYRAYT 412
Query: 629 ESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSL 688
++ S + T PEI R N L + A+ I+ +FDF+DPP L SA + L +L
Sbjct: 413 KAEMDS-FADATQPEILRTNPTSMVLQLLALDID-CNNFDFLDPPLEDGLRSAYKSLDAL 470
Query: 689 GALD--EEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPR 746
GA+ ++ +T LG++M ++PLDP SK+LL + GC +EIL++++++ + H+F
Sbjct: 471 GAIKTGDDSYITPLGRQMVQYPLDPKYSKLLLTASSFGCMEEILSLVSVLSSDHVFVSNS 530
Query: 747 ERQAKADEKRARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSL 796
E+ A A+F GDHLTLL V+ + WC +N++N RSL
Sbjct: 531 EKNEMAALAHAKFQSKHGDHLTLLNVFNGFLKSEKPKMWCHDNYLNLRSL 580
>POMBASE|SPAC20H4.09 [details] [associations]
symbol:SPAC20H4.09 "ATP-dependent RNA helicase,
spliceosomal (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IC;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0045292 "mRNA cis splicing,
via spliceosome" evidence=ISS] [GO:0071276 "cellular response to
cadmium ion" evidence=IMP] [GO:0071585 "detoxification of cadmium
ion" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAC20H4.09
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 EMBL:CU329670
GO:GO:0008380 GO:GO:0071276 GO:GO:0071585 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 RefSeq:NP_593629.1 ProteinModelPortal:Q9HE06
EnsemblFungi:SPAC20H4.09.1 GeneID:2542874 KEGG:spo:SPAC20H4.09
OMA:NYSVIIL OrthoDB:EOG4BGD47 NextBio:20803914 Uniprot:Q9HE06
Length = 647
Score = 1069 (381.4 bits), Expect = 3.9e-108, P = 3.9e-108
Identities = 225/521 (43%), Positives = 338/521 (64%)
Query: 285 QRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTK-GKIGCTQPR 343
Q++ LPI K +N+L+ AV NQ+ I++G TG GKTTQ+ Q+L EAG+ ++ G IGCTQPR
Sbjct: 21 QKKLLPITKYRNQLLYAVEQNQITIVLGHTGCGKTTQIPQFLYEAGWASQNGIIGCTQPR 80
Query: 344 RVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQY 403
R+ A SV++RV+ E G GY+I+F+ T IKYMTDG+LL EI D L +Y
Sbjct: 81 RLVAKSVSERVSLELNSPPGSLCGYSIQFDHNVSEKTKIKYMTDGILLNEIFFDPLLERY 140
Query: 404 SVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNI--FSI 461
S+++LDE HERT++TD+L G+LK+++++R D RL+++SA++DA + S +F + SI
Sbjct: 141 SIVILDEVHERTLSTDLLLGVLKRILEKRNDFRLVLSSASVDANKLSQFFGQDKVCTMSI 200
Query: 462 PGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEKI 521
G+ FPV+ + ++ +Y+DSA+ TV+ I+ P GDIL+FL+G++EI++ + + + +
Sbjct: 201 EGKLFPVETLFLQKPTENYVDSAIETVININSTYPPGDILVFLSGRKEIEYCIKKIEDSL 260
Query: 522 KALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDP 581
+D LV LP+++ L + Q R+F RKV+ +TNIAE S+TIDGI YV+D
Sbjct: 261 IHASEDCQTLVPLPLHAGLTVDEQMRVFNIYDGDFRKVIFSTNIAETSITIDGIVYVVDS 320
Query: 582 GFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTI 641
GF KQ +YNP R L+ PIS++SA+QR+GRAGRT GK +RLYTE AY S M
Sbjct: 321 GFNKQRIYNPYTRTSKLINVPISKSSAIQRSGRAGRTMRGKVFRLYTEKAY-SLMKEEFE 379
Query: 642 PEIQRINLVHTTLTMKAMGINNLLSFDF-VDPPSPQALISAMEQLYSLGALDEEGLLTK- 699
+I ++ L +K +G+ N+L F F V PP+ L++A+E LY LG LDE G LT
Sbjct: 380 ADILNCDMSPLVLFLKGLGLKNILQFPFFVRPPTVH-LMAALEDLYLLGVLDESGNLTDP 438
Query: 700 LGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADE--KRA 757
LG +++ LD +SK LL S GC+ EIL+I +++ G +F P +K D +
Sbjct: 439 LGIQISNSFLDANISKALLTSNQFGCTHEILSIASILTAGEVFYNPTS-SSKNDAFVAHS 497
Query: 758 RFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
FF EGD +T L V+E++ L WC +N++N ++L++
Sbjct: 498 SFFANEGDIITALNVFESFVGNKKDLQWCRKNYLNYQTLRQ 538
>SGD|S000001561 [details] [associations]
symbol:DHR2 "Predominantly nucleolar DEAH-box ATP-dependent
RNA helicase" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0003724 "RNA helicase activity"
evidence=IDA] [GO:0042254 "ribosome biogenesis" evidence=IDA;TAS]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001561 GO:GO:0005524 GO:GO:0005730
EMBL:BK006944 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GO:GO:0003724 GO:GO:0000462 EMBL:AF005090 EMBL:L15328 EMBL:X75560
EMBL:Z28078 PIR:S37903 RefSeq:NP_012845.1 ProteinModelPortal:P36009
SMR:P36009 DIP:DIP-6424N IntAct:P36009 MINT:MINT-677951
STRING:P36009 PaxDb:P36009 PeptideAtlas:P36009 EnsemblFungi:YKL078W
GeneID:853784 KEGG:sce:YKL078W CYGD:YKL078w KO:K14781 OMA:PGQEEID
OrthoDB:EOG4F7RTB NextBio:974906 Genevestigator:P36009
GermOnline:YKL078W Uniprot:P36009
Length = 735
Score = 1039 (370.8 bits), Expect = 5.8e-105, P = 5.8e-105
Identities = 227/540 (42%), Positives = 342/540 (63%)
Query: 277 RSKLS-IQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTK- 334
+S+ S + + R +LP+++ K E++ + N V +LIGETGSGK+TQ+ Q++ E Y TK
Sbjct: 68 KSRASDLLKMRETLPVYQHKREIMSYIESNPVTVLIGETGSGKSTQIPQFVLEKLYDTKK 127
Query: 335 -GKIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLRE 393
G I TQPRRVAA ++A RVA+E GC+LGE+VGY++RF++ T T +KY+TDGMLLRE
Sbjct: 128 HGSIAVTQPRRVAAINLATRVAQEHGCKLGEQVGYSVRFDNTTTTRTRLKYLTDGMLLRE 187
Query: 394 ILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKR-RPDLRLIVTSATLDAERFSGY 452
++++ +L +YSVI++DEAHERT+ TD++ G LK L++ RPDLR+IV SATL AE+FS +
Sbjct: 188 LMMNSDLREYSVIVIDEAHERTVLTDLILGFLKSLIQGPRPDLRIIVMSATLQAEKFSEF 247
Query: 453 FFNCNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDF 512
F N I + GR F V Y + D +D+ + +QI+ E GDIL FL GQEEID
Sbjct: 248 FNNAPILFVEGRKFDVKQYYLKAPTDDIVDAVIRCCIQINQGEELGDILCFLPGQEEIDK 307
Query: 513 ACESLCEKIKALGKD---VPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEAS 569
A ++ EKI D VP +V P+Y+ALP+ QS +F P RKVV +TNIAE S
Sbjct: 308 AV-TIMEKIAKYVSDEAPVPLIVPYPLYAALPAVQQSLVFAPIKGFKRKVVFSTNIAETS 366
Query: 570 LTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTE 629
+TI G+ +V+D G K V+ + L +L+ PISQASA+QR+GRAGR GK +RLY E
Sbjct: 367 VTISGVKFVVDSGLRKVKVWRHQLGLATLLTVPISQASAMQRSGRAGRESEGKSFRLYCE 426
Query: 630 SAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLG 689
S Y ++ + PEI R ++ L +K G+++LL++ + + P +A++ +++LY LG
Sbjct: 427 SDY-VKLPKQSEPEIARSDVTSPVLMLKRYGVDDLLNWTWFENPGKEAIVMGLQELYELG 485
Query: 690 ALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPR-ER 748
ALD G +TK G++MA PL P LS +L+ + ++GC +++ I++ + ++ P E
Sbjct: 486 ALDTRGKITKRGQQMALLPLQPHLSSVLIKASEVGCLSQVIDIVSCLSVENLLLNPSPEE 545
Query: 749 QAKADEKRARFFQPE---GDHLTL-----LAVYEAWKAKNFSLP---WCGENFVNSRSLK 797
+ + +E+R GD + L + YE K+++ S WC ++ R K
Sbjct: 546 RDEVNERRLSLCNAGKRYGDLIMLKELFDIYFYELGKSQDASSERNDWCKGLCISIRGFK 605
>UNIPROTKB|Q608K8 [details] [associations]
symbol:MCA1482 "ATP-dependent helicase HrpA" species:243233
"Methylococcus capsulatus str. Bath" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR010222
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:AE017282 GenomeReviews:AE017282_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:YP_113939.1 ProteinModelPortal:Q608K8 GeneID:3104911
KEGG:mca:MCA1482 PATRIC:22606802 Uniprot:Q608K8
Length = 1294
Score = 1026 (366.2 bits), Expect = 1.4e-103, P = 1.4e-103
Identities = 227/530 (42%), Positives = 327/530 (61%)
Query: 284 EQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCTQPR 343
E LP+ + + E+ +A+ NQV+I+ GETGSGKTTQL + EAG +G IG TQPR
Sbjct: 69 EYPEELPVSERRGEIAEAIRQNQVVIVCGETGSGKTTQLPKICLEAGRGIQGYIGHTQPR 128
Query: 344 RVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQY 403
R+AA SVA R+A+E LGE VGY +RF D T PD++IK MTDG+LL E D L QY
Sbjct: 129 RIAARSVAARIADELKRPLGETVGYKVRFHDQTRPDSLIKLMTDGILLAETQTDRFLDQY 188
Query: 404 SVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPG 463
+++DEAHER++N D L G LK L+ RR DL+L++TSAT+D ERFS +F N I +PG
Sbjct: 189 DTLIVDEAHERSLNIDFLLGYLKWLLPRRHDLKLVITSATIDPERFSRHFDNAPIVRVPG 248
Query: 464 RTFPVDINY----SRQEVTDYLD-----SALITVLQIHVDEPEGDILLFLTGQEEIDFAC 514
RT+PV+I Y S +E +D + + L V ++H E GDIL+FL+G+ EI
Sbjct: 249 RTYPVEIRYRPPDSAEEESDETERGEQQAILDAVDELH-RENTGDILIFLSGEREIRDTA 307
Query: 515 ESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDG 574
ESL + A + VLP+YS L Q +IF+P G R++V+ATN+AE SLT+ G
Sbjct: 308 ESLRKHHPA------DCEVLPLYSRLTVSEQEKIFKPH--GRRRIVLATNVAETSLTVPG 359
Query: 575 IFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRS 634
I VID G+A+ + Y+ + +L L I IS+ASA QRAGR GR GPG C RLY+E + +
Sbjct: 360 IRGVIDAGYARISRYSHRSKLQRLPIEKISRASANQRAGRCGRVGPGVCIRLYSEQDFLN 419
Query: 635 EMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEE 694
T PEI R NL L MKA+ + ++ F FV+PP + + + L + ALD +
Sbjct: 420 RPEFTD-PEILRTNLAAVILQMKALNLGDIRVFPFVEPPDERLVRDGLRTLQEINALDAQ 478
Query: 695 GLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADE 754
G LT+LG+++A P+DP L ++LLA + C E+ I+A + RP ++ AD+
Sbjct: 479 GRLTELGRRLARLPVDPRLGRILLAGAEENCLSEVCIIVAALSVPDPRERPADKAQAADQ 538
Query: 755 KRARFFQPEGDHLTLLAVYEAWKAKNFSLP------WCGENFVNSRSLKK 798
K ARF P+ D + +LA++ ++ + L +C +NF+++ +++
Sbjct: 539 KHARFRHPDSDFMAILALWNDYEEQRQHLSGSKLRQYCRDNFLSALRMRE 588
>UNIPROTKB|I3L1L6 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AC004148 HGNC:HGNC:16718 ChiTaRS:DHX33
Ensembl:ENST00000572490 Uniprot:I3L1L6
Length = 617
Score = 997 (356.0 bits), Expect = 1.7e-100, P = 1.7e-100
Identities = 205/445 (46%), Positives = 284/445 (63%)
Query: 366 VGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLL 425
VGY +RF+D T DT IK++TDGMLLRE + D L +YS ++LDEAHERTI+TDVLFG++
Sbjct: 61 VGYTVRFDDVTSEDTRIKFLTDGMLLREAISDSLLRKYSCVILDEAHERTIHTDVLFGVV 120
Query: 426 KQLVKRRPDL-----RLIVTSATLDAERFSGYFFNCNIFSIPGRTFPVDINYSRQEVTDY 480
K KRR +L ++IV SAT+D + FS YF + + GR P+ + Y++Q DY
Sbjct: 121 KAAQKRRKELGKLPLKVIVMSATMDVDLFSQYFNGAPVLYLEGRQHPIQVFYTKQPQNDY 180
Query: 481 LDSALITVLQIHVDEPEG-DILLFLTGQEEIDFACESLCEKI-KALGKDVPELVVLPVYS 538
L +AL++V QIH + P DIL+FLTGQEEI+ A C I K L P ++VLP+Y+
Sbjct: 181 LHAALVSVFQIHQEAPSSQDILVFLTGQEEIE-AMSKTCRDIAKHLPDGCPAMLVLPLYA 239
Query: 539 ALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSL 598
+LP Q R+F+ AP G RKV+++TNIAE S+TI GI YV+D G K YNP L+ L
Sbjct: 240 SLPYAQQLRVFQGAPKGYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVL 299
Query: 599 VITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKA 658
+ +S+ A QR GRAGR G CYRLYTE + + T+PEIQR NL L + A
Sbjct: 300 AVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFE-KFDKMTVPEIQRCNLASVMLQLLA 358
Query: 659 MGINNLLSFDFVDPPSPQALISAMEQLYSLGAL---DEEGLLTKLGKKMAEFPLDPPLSK 715
M + N+L+FDF+ PSP + +A+ QL LGAL D++ LT +G+KMA FPL+P +K
Sbjct: 359 MKVPNVLTFDFMSKPSPDHIQAAIAQLDLLGALEHKDDQLTLTPMGRKMAAFPLEPKFAK 418
Query: 716 MLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQPEGDHLTLLAVYEA 775
+L S C++EILTI++++ + P R+ + R +F EGDH+TLL +Y
Sbjct: 419 TILMSPKFHCTEEILTIVSLLSVDSVLHNPPSRREEVQGVRKKFISSEGDHMTLLNIYRT 478
Query: 776 WKAKNFSLPWCGENFVNSRSLKKTA 800
+K + WC ENFVNS+++ A
Sbjct: 479 FKNLGGNKDWCKENFVNSKNMTLVA 503
>UNIPROTKB|Q14147 [details] [associations]
symbol:DHX34 "Probable ATP-dependent RNA helicase DHX34"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0008270
GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:D50924 EMBL:AC008754 EMBL:AK297692
IPI:IPI00382739 RefSeq:NP_055496.2 UniGene:Hs.151706
ProteinModelPortal:Q14147 SMR:Q14147 IntAct:Q14147
PhosphoSite:Q14147 DMDM:311033371 PaxDb:Q14147 PRIDE:Q14147
DNASU:9704 Ensembl:ENST00000328771 GeneID:9704 KEGG:hsa:9704
UCSC:uc010xyn.2 CTD:9704 GeneCards:GC19P047853 HGNC:HGNC:16719
HPA:HPA042159 HPA:HPA043558 neXtProt:NX_Q14147 PharmGKB:PA27221
HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B PhylomeDB:Q14147
ChiTaRS:DHX34 GenomeRNAi:9704 NextBio:36469 Bgee:Q14147
CleanEx:HS_DHX34 Genevestigator:Q14147 GermOnline:ENSG00000134815
Uniprot:Q14147
Length = 1143
Score = 965 (344.8 bits), Expect = 1.1e-99, Sum P(2) = 1.1e-99
Identities = 234/629 (37%), Positives = 352/629 (55%)
Query: 199 RTAALQSALTKERREVREQQLRTMIDSIPKDLNRPWEDPMPETGERHLAQELRG---VG- 254
R Q+ T + E Q + I ++ DL R + DP L RG +G
Sbjct: 66 RLQRFQNLKTSRKEEKDPGQPKHSIPALA-DLPRTY-DPRYRINLSVLGPATRGSQGLGR 123
Query: 255 -LSARDMPEWKKNA-----YGKAFTFGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVL 308
L A + E+++ +G+ FG+ +KL Q +R +LPI + N ++Q + ++QV+
Sbjct: 124 HLPAERVAEFRRALLHYLDFGQKQAFGRLAKL--QRERAALPIAQYGNRILQTLKEHQVV 181
Query: 309 ILIGETGSGKTTQLAQYLAEAGYTTKGKIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGY 368
++ G+TG GK+TQ+ QYL AG++ + CTQPRR+A S+AKRV E + G +VGY
Sbjct: 182 VVAGDTGCGKSTQVPQYLLAAGFS---HVACTQPRRIACISLAKRVGFESLSQYGSQVGY 238
Query: 369 AIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQL 428
IRFE T I ++T G+LLR+I + +L QY V+++DE HER ++ D L G+L++L
Sbjct: 239 QIRFESTRSAATKIVFLTVGLLLRQIQREPSLPQYEVLIVDEVHERHLHNDFLLGVLQRL 298
Query: 429 VKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPVDINYSRQEV------TDYLD 482
+ RPDL++I+ SAT++ FS YF N + +PGR FP+ + Y QE ++ LD
Sbjct: 299 LPTRPDLKVILMSATINISLFSSYFSNAPVVQVPGRLFPITVVYQPQEAEPTTSKSEKLD 358
Query: 483 SA-LITVLQI--HVDEPE--GDILLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPVY 537
+ VL+ H PE GD+L+FL+G EI ++ E + VVLP++
Sbjct: 359 PRPFLRVLESIDHKYPPEERGDLLVFLSGMAEIS----AVLEAAQTYASHTQRWVVLPLH 414
Query: 538 SALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDS 597
SAL Q ++F+ APPG RK +++TNIAE S+TIDGI +V+D G K+ Y+P+ +L
Sbjct: 415 SALSVADQDKVFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQR 474
Query: 598 LVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMK 657
L ISQASA QR GRAGRTGPG C+RLY ES Y + +P +PEI+R+ L L MK
Sbjct: 475 LQEFWISQASAEQRKGRAGRTGPGVCFRLYAESDYDA-FAPYPVPEIRRVALDSLVLQMK 533
Query: 658 AMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLSKML 717
+M + + +F F++PP P +L +A+ L GALD LT +G +A+ P+D + KML
Sbjct: 534 SMSVGDPRTFPFIEPPPPASLETAILYLRDQGALDSSEALTPIGSLLAQLPVDVVIGKML 593
Query: 718 LASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQPEGDHLTLLAVYEAW- 776
+ + +LTI A + FTR + + R +GD TL V+ AW
Sbjct: 594 ILGSMFSLVEPVLTIAAALSVQSPFTRSAQSSPECAAARRPLESDQGDPFTLFNVFNAWV 653
Query: 777 -----KAKNFSLPWCGENFVNSRSLKKTA 800
+++N S WC + L + A
Sbjct: 654 QVKSERSRN-SRKWCRRRGIEEHRLYEMA 681
Score = 44 (20.5 bits), Expect = 1.1e-99, Sum P(2) = 1.1e-99
Identities = 10/37 (27%), Positives = 20/37 (54%)
Query: 87 KKKSGRDRKTNYKAEFENDR-ERSGRYCKSNPPMLKD 122
+ + GRDR+ +++A E + E+ C +L+D
Sbjct: 5 RTREGRDRRDHHRAPSEEEALEKWDWNCPETRRLLED 41
>UNIPROTKB|C9JEW8 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HGNC:HGNC:18018 ChiTaRS:DHX40 EMBL:AC091271
EMBL:AC004167 IPI:IPI00789290 ProteinModelPortal:C9JEW8 SMR:C9JEW8
STRING:C9JEW8 Ensembl:ENST00000451169 ArrayExpress:C9JEW8
Bgee:C9JEW8 Uniprot:C9JEW8
Length = 731
Score = 533 (192.7 bits), Expect = 2.0e-99, Sum P(2) = 2.0e-99
Identities = 106/257 (41%), Positives = 160/257 (62%)
Query: 545 QSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPIS 604
Q RIF P PPG RK V++TNI+ SLTIDGI YV+D GF KQ +NP+ LD L + PIS
Sbjct: 279 QRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPIS 338
Query: 605 QASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNL 664
++ ALQR+GRAGRT GKC+R+Y++ + M IPEI+R +L LT+K + I+++
Sbjct: 339 KSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDV 398
Query: 665 LSFDFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLG 724
+ F ++DPP+ + ++ A++QLY A+D G +T+LG M EFPL P L+ ++ + L
Sbjct: 399 IRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIKAASLD 458
Query: 725 CSDEILTIIAMIQTGHIFTRP--RERQAKADEKRARFFQPEG---DHLTLLAVYEAWKAK 779
C D +L I AM+ ++F RP E Q +A+++ G D TL ++E K+
Sbjct: 459 CEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIFEQCKSS 518
Query: 780 NFSLPWCGENFVNSRSL 796
WC +++++ R L
Sbjct: 519 GAPASWCQKHWIHWRCL 535
Score = 495 (179.3 bits), Expect = 2.0e-99, Sum P(2) = 2.0e-99
Identities = 101/202 (50%), Positives = 141/202 (69%)
Query: 337 IGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILI 396
IG TQPR+VAA SVA+RVAEE C LG +VGY +RF+DC+ +T IKYMTDG LL+ IL
Sbjct: 2 IGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILG 61
Query: 397 DENLSQYSVIMLDEAHERTINTDVLFGLLKQLVK-----RRPDLRLIVTSATLDAERFSG 451
D NL+++SVI+LDEAHERT+ TD+LFGLLK+L + R+ L+++V SAT++ + S
Sbjct: 62 DPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSA 121
Query: 452 YFFNCNIFSIPGRTFPVDINYSR------QEVTDYLDSALITVLQIHVDEPEGDILLFLT 505
+F NC IF IPGR +PV + +E T Y+ + + + IH++E GDIL+FLT
Sbjct: 122 FFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLT 181
Query: 506 GQEEIDFACESLCEKIKALGKD 527
GQ EI+ +CE L + +++ D
Sbjct: 182 GQFEIEKSCELLFQMAESVDYD 203
>UNIPROTKB|Q8EEY1 [details] [associations]
symbol:hrpA "ATP-dependent helicase HrpA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:NP_717826.1 ProteinModelPortal:Q8EEY1 GeneID:1169965
KEGG:son:SO_2229 PATRIC:23524089 ProtClustDB:CLSK906644
Uniprot:Q8EEY1
Length = 1293
Score = 961 (343.3 bits), Expect = 9.7e-99, Sum P(2) = 9.7e-99
Identities = 208/503 (41%), Positives = 312/503 (62%)
Query: 288 SLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCTQPRRVAA 347
+LP+ ++ ++ +A+ NQV+I+ GETGSGKTTQL + E G ++G IG TQPRR+AA
Sbjct: 75 NLPVSGMREDIAKAISANQVVIIAGETGSGKTTQLPKICLELGLGSRGFIGHTQPRRLAA 134
Query: 348 TSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIM 407
SVA RVAEE LGE VG+ +RF D ++ IK MTDG+LL E+ D L QY I+
Sbjct: 135 RSVASRVAEELQSPLGEVVGFKVRFADALKSESYIKLMTDGILLAELTSDRYLDQYDTII 194
Query: 408 LDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFP 467
+DEAHER++N D + G LKQ++K+RPDL++I+TSAT+D ERFS +F N I + GRT+P
Sbjct: 195 IDEAHERSLNIDFILGYLKQILKKRPDLKIIITSATIDVERFSKHFNNAPIIEVSGRTYP 254
Query: 468 VDINYSR--QEVTDYLDS--ALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEKIKA 523
V+ Y Q+ LD + + V E GDIL+F+ G+ EI E L +
Sbjct: 255 VETRYRPLVQDTEADLDQIEGIFAAVDELVAEGLGDILIFMNGEREIRDTAEQLNRR--- 311
Query: 524 LGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGF 583
+ + +LP+Y+ L QS++F GR++V+ATN+AE SLT+ GI YVIDPG
Sbjct: 312 ---NYRDTEILPLYARLSYGEQSKVFSSHT--GRRIVLATNVAETSLTVPGIRYVIDPGT 366
Query: 584 AKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPE 643
A+ + Y+ + ++ L I PISQASA QR GR GR GPG C RLY E+ + + + T PE
Sbjct: 367 ARISRYSYRTKVQRLPIEPISQASANQRQGRCGRVGPGICIRLYDEADFNNRPAFTD-PE 425
Query: 644 IQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEE-G--LLTKL 700
I R NL L M A+G+ ++ +F F++PP P+ + L L A+ ++ G +LT L
Sbjct: 426 ILRTNLASVILQMLAIGLGDIAAFPFIEPPDPRHIRDGFLLLEELQAVKQQKGNIVLTPL 485
Query: 701 GKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFF 760
G+++++ P+DP L++M++ S LGC +E+L I + + RP +++ +DE RF
Sbjct: 486 GRQLSQIPVDPRLARMVIESHQLGCLNEVLVIASGLSIQDPRERPMDKKQASDEAHRRFA 545
Query: 761 QPEGDHLTLLAVYEAWKAKNFSL 783
P+ D ++ + +++ K + L
Sbjct: 546 DPQSDFVSWVNLWQHLKEQQKEL 568
Score = 39 (18.8 bits), Expect = 9.7e-99, Sum P(2) = 9.7e-99
Identities = 8/31 (25%), Positives = 13/31 (41%)
Query: 753 DEKRARFFQPEGDHLTLLAVYEAWKAKNFSL 783
D ++ Q DH++ L + W N L
Sbjct: 824 DFNKSLLMQRSADHISALDFPDTWHKGNIRL 854
>TIGR_CMR|SO_2229 [details] [associations]
symbol:SO_2229 "ATP-dependent helicase HrpA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:NP_717826.1 ProteinModelPortal:Q8EEY1 GeneID:1169965
KEGG:son:SO_2229 PATRIC:23524089 ProtClustDB:CLSK906644
Uniprot:Q8EEY1
Length = 1293
Score = 961 (343.3 bits), Expect = 9.7e-99, Sum P(2) = 9.7e-99
Identities = 208/503 (41%), Positives = 312/503 (62%)
Query: 288 SLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCTQPRRVAA 347
+LP+ ++ ++ +A+ NQV+I+ GETGSGKTTQL + E G ++G IG TQPRR+AA
Sbjct: 75 NLPVSGMREDIAKAISANQVVIIAGETGSGKTTQLPKICLELGLGSRGFIGHTQPRRLAA 134
Query: 348 TSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIM 407
SVA RVAEE LGE VG+ +RF D ++ IK MTDG+LL E+ D L QY I+
Sbjct: 135 RSVASRVAEELQSPLGEVVGFKVRFADALKSESYIKLMTDGILLAELTSDRYLDQYDTII 194
Query: 408 LDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFP 467
+DEAHER++N D + G LKQ++K+RPDL++I+TSAT+D ERFS +F N I + GRT+P
Sbjct: 195 IDEAHERSLNIDFILGYLKQILKKRPDLKIIITSATIDVERFSKHFNNAPIIEVSGRTYP 254
Query: 468 VDINYSR--QEVTDYLDS--ALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEKIKA 523
V+ Y Q+ LD + + V E GDIL+F+ G+ EI E L +
Sbjct: 255 VETRYRPLVQDTEADLDQIEGIFAAVDELVAEGLGDILIFMNGEREIRDTAEQLNRR--- 311
Query: 524 LGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGF 583
+ + +LP+Y+ L QS++F GR++V+ATN+AE SLT+ GI YVIDPG
Sbjct: 312 ---NYRDTEILPLYARLSYGEQSKVFSSHT--GRRIVLATNVAETSLTVPGIRYVIDPGT 366
Query: 584 AKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPE 643
A+ + Y+ + ++ L I PISQASA QR GR GR GPG C RLY E+ + + + T PE
Sbjct: 367 ARISRYSYRTKVQRLPIEPISQASANQRQGRCGRVGPGICIRLYDEADFNNRPAFTD-PE 425
Query: 644 IQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEE-G--LLTKL 700
I R NL L M A+G+ ++ +F F++PP P+ + L L A+ ++ G +LT L
Sbjct: 426 ILRTNLASVILQMLAIGLGDIAAFPFIEPPDPRHIRDGFLLLEELQAVKQQKGNIVLTPL 485
Query: 701 GKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFF 760
G+++++ P+DP L++M++ S LGC +E+L I + + RP +++ +DE RF
Sbjct: 486 GRQLSQIPVDPRLARMVIESHQLGCLNEVLVIASGLSIQDPRERPMDKKQASDEAHRRFA 545
Query: 761 QPEGDHLTLLAVYEAWKAKNFSL 783
P+ D ++ + +++ K + L
Sbjct: 546 DPQSDFVSWVNLWQHLKEQQKEL 568
Score = 39 (18.8 bits), Expect = 9.7e-99, Sum P(2) = 9.7e-99
Identities = 8/31 (25%), Positives = 13/31 (41%)
Query: 753 DEKRARFFQPEGDHLTLLAVYEAWKAKNFSL 783
D ++ Q DH++ L + W N L
Sbjct: 824 DFNKSLLMQRSADHISALDFPDTWHKGNIRL 854
>TAIR|locus:2142459 [details] [associations]
symbol:AT5G10370 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR002867
InterPro:IPR004087 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF01485 Pfam:PF04408 PROSITE:PS00028 PROSITE:PS00690
PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184 SMART:SM00322
SMART:SM00355 SMART:SM00490 SMART:SM00647 SMART:SM00847
Pfam:PF00097 Prosite:PS00518 GO:GO:0005524 EMBL:CP002688
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12818 IPI:IPI00548793
RefSeq:NP_196599.2 UniGene:At.49004 PRIDE:F4KGU4
EnsemblPlants:AT5G10370.1 GeneID:830901 KEGG:ath:AT5G10370
OMA:HQEPEIR ArrayExpress:F4KGU4 Uniprot:F4KGU4
Length = 1775
Score = 977 (349.0 bits), Expect = 2.9e-97, P = 2.9e-97
Identities = 215/528 (40%), Positives = 318/528 (60%)
Query: 289 LPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCTQPRRVAAT 348
LPI+ + ++++ +H Q+++LIGETGSGK+TQL Q+LA++G I CTQPR++AA
Sbjct: 306 LPIYAYRRQILKKIHREQIMVLIGETGSGKSTQLVQFLADSGVAASESIVCTQPRKIAAM 365
Query: 349 SVAKRVAEEF-GCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIM 407
++A RV EE GC V F + + YMTD LL+ + D +LS S ++
Sbjct: 366 TLADRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDRSLSGISCVI 425
Query: 408 LDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFP 467
+DEAHER++NTD+L LLK+L+ RR DLRL++ SAT DA++ S YFF+C I + GR FP
Sbjct: 426 IDEAHERSLNTDLLLALLKKLLSRRIDLRLVIMSATADAKQLSQYFFSCGILLVNGRNFP 485
Query: 468 VDINYSRQE---------VTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLC 518
V+I YS + + Y+ + ++IH E EG IL FLT Q E+++ACE
Sbjct: 486 VEIVYSPSDTEENSVVGGIASYVGDVVKMAVEIHKTEKEGTILAFLTSQAEVEWACERFI 545
Query: 519 EKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYV 578
P + LP++ L E Q R+F+ P G RKV+ ATNIAE SLTI G+ YV
Sbjct: 546 ---------TPSAIALPLHGKLSFEEQFRVFQNHP-GRRKVIFATNIAETSLTIPGVKYV 595
Query: 579 IDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSP 638
ID G K++ Y P+ + L + +SQ+SA QRAGRAGRT PG+CYRLY+++ + S M+
Sbjct: 596 IDSGMVKESKYEPRTGMSILKVCRVSQSSARQRAGRAGRTEPGRCYRLYSKNDFDS-MNL 654
Query: 639 TTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEE-GL- 696
PEI+R++L L M A+G+NN+ F+FVD P P+A+ A++ L LGA+ E+ G+
Sbjct: 655 NQEPEIRRVHLGVALLRMLALGVNNIAEFNFVDAPVPEAIAMAVQNLVQLGAVVEKNGVH 714
Query: 697 -LTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIA-MIQTGHIFTRPR--ERQAKA 752
LT+ G + + L+P L K++L E + + A M IF R + + KA
Sbjct: 715 ELTQEGHCLVKLGLEPKLGKLILGCFRHRMGKEGIVLAAVMANASSIFCRVGNFDDKMKA 774
Query: 753 DEKRARFFQPEGDHLTLLAVYEAWKA--KNFSLPWCGENFVNSRSLKK 798
D + +F GD TLL+VY+ W + + WC EN +N++S+++
Sbjct: 775 DRLKVQFCNQNGDLFTLLSVYKEWASLPRERRNKWCWENSLNAKSMRR 822
>UNIPROTKB|B0V0F8 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR002464 InterPro:IPR011545
Pfam:PF00270 PROSITE:PS00690 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOVERGEN:HBG039428 HGNC:HGNC:2739 OrthoDB:EOG4VHK5Q EMBL:CR759873
IPI:IPI00894081 SMR:B0V0F8 Ensembl:ENST00000450902 Uniprot:B0V0F8
Length = 669
Score = 904 (323.3 bits), Expect = 1.1e-96, Sum P(3) = 1.1e-96
Identities = 170/283 (60%), Positives = 223/283 (78%)
Query: 277 RSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKG- 335
+ K SIQ RRSLP+F + EL+ A+ ++QVLI+ GETGSGKTTQ+ QYL E GYT KG
Sbjct: 387 QQKESIQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGM 446
Query: 336 KIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREIL 395
KI CTQPRRVAA SVA RVA E G +LG EVGY+IRFEDCT TV++YMTDGMLLRE L
Sbjct: 447 KIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFL 506
Query: 396 IDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFN 455
+ +L+ YSV+M+DEAHERT++TD+LFGL+K + + RP+L+++V SAT+D RFS +F +
Sbjct: 507 SEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDD 566
Query: 456 CNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACE 515
+F IPGR FPVDI Y++ DYL++ +++VLQIHV +P GDIL+FLTGQEEI+ ACE
Sbjct: 567 APVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACE 626
Query: 516 SLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRK 558
L ++ + LG + EL+VLP+Y+ LPS++Q+RIF+P PPG RK
Sbjct: 627 MLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARK 669
Score = 47 (21.6 bits), Expect = 1.1e-96, Sum P(3) = 1.1e-96
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 85 QSKKKSGRDRKTNYKAEFENDRERSGR 111
+ KKK+G ++ K E E++ ER+ R
Sbjct: 143 KGKKKTGGSKQQTEKPESEDEWERTER 169
Score = 43 (20.2 bits), Expect = 1.1e-96, Sum P(3) = 1.1e-96
Identities = 9/36 (25%), Positives = 21/36 (58%)
Query: 22 ELETHLGFIDKVLAEFISESGRNSETVEIFDDKLKE 57
EL + LG ++ +A+F+ + + + E F +L++
Sbjct: 14 ELHSVLGLSERHVAQFLIGTAQRCTSAEEFVQRLRD 49
>UNIPROTKB|E1BJ90 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00355 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:DSDQVFH GeneTree:ENSGT00700000104421
EMBL:DAAA02047415 IPI:IPI00713665 UniGene:Bt.42016
Ensembl:ENSBTAT00000008999 NextBio:20867826 Uniprot:E1BJ90
Length = 1146
Score = 941 (336.3 bits), Expect = 2.0e-96, Sum P(2) = 2.0e-96
Identities = 213/545 (39%), Positives = 322/545 (59%)
Query: 274 FGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTT 333
FG+ +KL Q +R +LPI + + ++Q + ++QV+++ G+TG GK+TQ+ QYL AG +
Sbjct: 149 FGRLAKL--QRERAALPIAQYGHHILQMLKEHQVVVVAGDTGCGKSTQVPQYLLAAGCS- 205
Query: 334 KGKIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLRE 393
+ CTQPRR+A S+AKRV E + G +VGY IRFE T I ++T G+LLR+
Sbjct: 206 --HVACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQ 263
Query: 394 ILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYF 453
+ + +L QY V+++DE HER ++ D L G+L++L+ +RPDL++++ SAT++ FS YF
Sbjct: 264 MQREPSLPQYQVLIVDEVHERHLHNDFLLGVLQRLLPQRPDLKVVLMSATINISLFSSYF 323
Query: 454 FNCNIFSIPGRTFPVDINYSRQEV------TDYLDSA-LITVLQIHVDE---PE--GDIL 501
N + +PGR FP+ + Y QE ++ LD + VL+ +D PE GD+L
Sbjct: 324 GNAPVVQVPGRLFPITVVYQPQEAEPTTSKSEKLDPRPFLRVLEA-IDNKYPPEERGDLL 382
Query: 502 LFLTGQEEIDFACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVV 561
+FL+G EI ++ E +A VVLP++SAL Q ++F+ APPG RK ++
Sbjct: 383 VFLSGMAEIS----AVLEPAQAYASHTQRWVVLPLHSALSVADQDKVFDVAPPGVRKCIL 438
Query: 562 ATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPG 621
+TNIAE S+TIDGI +V+D G K+ Y+P+ +L L ISQASA QR GRAGRTGPG
Sbjct: 439 STNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGPG 498
Query: 622 KCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISA 681
C+RLY ES Y + +P +PEI+R+ L L MK+M + + +F F++PP P +L +A
Sbjct: 499 VCFRLYAESDYDA-FAPYPVPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPPPTSLETA 557
Query: 682 MEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHI 741
+ L GALD LT +G +A+ P+D + KML+ ++ +LTI A +
Sbjct: 558 ILYLRDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFHLAEPVLTIAAALSVQTP 617
Query: 742 FTRPRERQAKADEKRARFFQPEGDHLTLLAVYEAW------KAKNFSLPWCGENFVNSRS 795
FTR + + R +GD TLL V+ W + +N S WC +
Sbjct: 618 FTRSAQSNPECAATRRPLESDQGDPFTLLNVFNTWVQVKSERGRN-SRKWCRHRGIEEHR 676
Query: 796 LKKTA 800
L + A
Sbjct: 677 LYEMA 681
Score = 37 (18.1 bits), Expect = 2.0e-96, Sum P(2) = 2.0e-96
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 119 MLKDMPVSRMGGVSGVLASNEYPRY 143
MLK+ V + G +G S + P+Y
Sbjct: 174 MLKEHQVVVVAGDTGCGKSTQVPQY 198
>UNIPROTKB|Q9KS77 [details] [associations]
symbol:VC1382 "ATP-dependent helicase HrpA" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004386
"helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 InterPro:IPR024590 Pfam:PF11898
TIGRFAMs:TIGR01967 EMBL:AE004217 PIR:F82207 RefSeq:NP_231026.2
ProteinModelPortal:Q9KS77 DNASU:2614836 GeneID:2614836
KEGG:vch:VC1382 PATRIC:20081832 Uniprot:Q9KS77
Length = 1309
Score = 957 (341.9 bits), Expect = 2.9e-96, P = 2.9e-96
Identities = 212/497 (42%), Positives = 308/497 (61%)
Query: 289 LPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCTQPRRVAAT 348
LP+ + ++++ QA+ +QV+I+ GETGSGKTTQL + AE G G IG TQPRR+AA
Sbjct: 87 LPVSQKRDDIAQAIAHHQVVIVAGETGSGKTTQLPKICAELGRGKYGLIGHTQPRRLAAR 146
Query: 349 SVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIML 408
SVA R+AEE LG VGY +RF D T IK MTDG+LL EI D L+QY I++
Sbjct: 147 SVANRIAEEMETELGGFVGYKVRFTDQISDQTQIKLMTDGILLAEIQNDRFLNQYDTIII 206
Query: 409 DEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPV 468
DEAHER++N D + G LKQL+ RRPDL++I+TSAT+D ERFS +F N I + GRT+PV
Sbjct: 207 DEAHERSLNIDFILGYLKQLLPRRPDLKVIITSATIDPERFSKHFSNAPIIEVSGRTYPV 266
Query: 469 DINY-------SRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEKI 521
++ Y + D L+ V ++ DE GDIL+F+ G+ EI ++L ++
Sbjct: 267 EVRYRPLAGDDDSESDRDQLEGIFQAVDEL-CDEGLGDILIFMNGEREIRDTADALSKR- 324
Query: 522 KALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDP 581
++ + ++P+Y+ L + Q++IF+P GR++V+ATN+AE SLT+ GI YVIDP
Sbjct: 325 -----NLRDTEIVPLYARLSAGEQNKIFQPH--AGRRIVLATNVAETSLTVPGIKYVIDP 377
Query: 582 GFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTI 641
G A+ + Y+ + ++ L I PISQASA QR GR GRT G C RLY+E + S T
Sbjct: 378 GTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRTEEGICIRLYSEEDFLSRPEFTD- 436
Query: 642 PEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGAL-----DEEGL 696
PEI R NL L M A+G+ ++ +F FV+ P + + + L LGA+ D +
Sbjct: 437 PEILRTNLASVILQMTALGLGDIEAFPFVEAPDKRNIQDGVRLLEELGAINDQIKDPKKR 496
Query: 697 LTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKR 756
LT+ GK++A P+DP L++M+L + LGC E++ I + + RP ++Q AD+K
Sbjct: 497 LTESGKQLARLPIDPRLARMVLEASKLGCLKEVMIIASALSIQDPRERPSDKQQSADDKH 556
Query: 757 ARFFQPEGDHLTLLAVY 773
RF + D LTL+ ++
Sbjct: 557 RRFNHEDSDFLTLVNLW 573
>TIGR_CMR|VC_1382 [details] [associations]
symbol:VC_1382 "ATP-dependent helicase HrpA" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004386 "helicase activity"
evidence=ISS] [GO:0008152 "metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR010222 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GenomeReviews:AE003852_GR GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 InterPro:IPR024590 Pfam:PF11898
TIGRFAMs:TIGR01967 EMBL:AE004217 PIR:F82207 RefSeq:NP_231026.2
ProteinModelPortal:Q9KS77 DNASU:2614836 GeneID:2614836
KEGG:vch:VC1382 PATRIC:20081832 Uniprot:Q9KS77
Length = 1309
Score = 957 (341.9 bits), Expect = 2.9e-96, P = 2.9e-96
Identities = 212/497 (42%), Positives = 308/497 (61%)
Query: 289 LPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCTQPRRVAAT 348
LP+ + ++++ QA+ +QV+I+ GETGSGKTTQL + AE G G IG TQPRR+AA
Sbjct: 87 LPVSQKRDDIAQAIAHHQVVIVAGETGSGKTTQLPKICAELGRGKYGLIGHTQPRRLAAR 146
Query: 349 SVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIML 408
SVA R+AEE LG VGY +RF D T IK MTDG+LL EI D L+QY I++
Sbjct: 147 SVANRIAEEMETELGGFVGYKVRFTDQISDQTQIKLMTDGILLAEIQNDRFLNQYDTIII 206
Query: 409 DEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPV 468
DEAHER++N D + G LKQL+ RRPDL++I+TSAT+D ERFS +F N I + GRT+PV
Sbjct: 207 DEAHERSLNIDFILGYLKQLLPRRPDLKVIITSATIDPERFSKHFSNAPIIEVSGRTYPV 266
Query: 469 DINY-------SRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEKI 521
++ Y + D L+ V ++ DE GDIL+F+ G+ EI ++L ++
Sbjct: 267 EVRYRPLAGDDDSESDRDQLEGIFQAVDEL-CDEGLGDILIFMNGEREIRDTADALSKR- 324
Query: 522 KALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDP 581
++ + ++P+Y+ L + Q++IF+P GR++V+ATN+AE SLT+ GI YVIDP
Sbjct: 325 -----NLRDTEIVPLYARLSAGEQNKIFQPH--AGRRIVLATNVAETSLTVPGIKYVIDP 377
Query: 582 GFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTI 641
G A+ + Y+ + ++ L I PISQASA QR GR GRT G C RLY+E + S T
Sbjct: 378 GTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRTEEGICIRLYSEEDFLSRPEFTD- 436
Query: 642 PEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGAL-----DEEGL 696
PEI R NL L M A+G+ ++ +F FV+ P + + + L LGA+ D +
Sbjct: 437 PEILRTNLASVILQMTALGLGDIEAFPFVEAPDKRNIQDGVRLLEELGAINDQIKDPKKR 496
Query: 697 LTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKR 756
LT+ GK++A P+DP L++M+L + LGC E++ I + + RP ++Q AD+K
Sbjct: 497 LTESGKQLARLPIDPRLARMVLEASKLGCLKEVMIIASALSIQDPRERPSDKQQSADDKH 556
Query: 757 ARFFQPEGDHLTLLAVY 773
RF + D LTL+ ++
Sbjct: 557 RRFNHEDSDFLTLVNLW 573
>UNIPROTKB|G4NBP1 [details] [associations]
symbol:MGG_00523 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase PRP2" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CM001235 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 RefSeq:XP_003718533.1 EnsemblFungi:MGG_00523T0
GeneID:2674513 KEGG:mgr:MGG_00523 Uniprot:G4NBP1
Length = 803
Score = 633 (227.9 bits), Expect = 6.2e-96, Sum P(3) = 6.2e-96
Identities = 146/346 (42%), Positives = 206/346 (59%)
Query: 461 IPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEP-EGDILLFLTGQEEIDFACESLCE 519
I GR FPV+I +S + V D + TV +IH EP GDIL+FL GQE I+ + L E
Sbjct: 342 IEGRQFPVEIIHSPKPVPVLADEVVKTVFKIHCGEPLPGDILVFLYGQEPIE-EIQRLIE 400
Query: 520 KIKA-LGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYV 578
+ A L DVP++ LP++ L E Q F P RKVV+ATNIAE S+T+ G+ YV
Sbjct: 401 EYAATLASDVPKIKALPLFGQLSMEAQHTAFRPLKGRVRKVVLATNIAETSVTVPGVRYV 460
Query: 579 IDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSP 638
ID G +K Y L+SL++ IS++SA+QRAGRAGR PGKCYRLYTE Y+ EM
Sbjct: 461 IDTGKSKMKQYRASLGLESLLVDAISKSSAIQRAGRAGREAPGKCYRLYTEDVYK-EMRD 519
Query: 639 TTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLT 698
+PEI R N+ L M A G+++LL+F +D P + AM QL LGA+D+EG +T
Sbjct: 520 ADLPEILRNNVREAALIMMARGVDDLLTFPLMDTPKISRMEKAMVQLNILGAIDDEGAIT 579
Query: 699 KLGKKMAEFPLDPPLSKMLLASVD--LGCSDEILTIIAMIQTGH-IFTRPRERQAK--AD 753
+LGKKMA P+ PL ++LLA+ C E++ II+ I G IF + + +A+ +
Sbjct: 580 ELGKKMARLPVAAPLGRVLLAAASPAYDCLLEVIDIISCISGGDDIFHQLQSEEAREEVE 639
Query: 754 EKRARFFQPEGDHLTLLAVYEAWKAKNFS-LPWCGENFVNSRSLKK 798
E R + EGD + L + + A+N WC + +N R++++
Sbjct: 640 EYRRELRRREGDLMVYLTTMQMYTAENSDRTEWCKKRKINLRTMRQ 685
Score = 230 (86.0 bits), Expect = 6.2e-96, Sum P(3) = 6.2e-96
Identities = 59/140 (42%), Positives = 83/140 (59%)
Query: 335 GKIGCTQPRRVAATSVAKRVAEEFGCRL------GEE-------VGYAIRFEDCTGPDTV 381
G I TQPRRVAAT++A RVA E G L G + VGY++RF+ T
Sbjct: 181 GMIAVTQPRRVAATTLAHRVAREAGTPLQPSGTSGAKPGAAEGLVGYSVRFDHNVPKGTK 240
Query: 382 IKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPD------- 434
IK++T+GMLL+E+L D +L QYS +++DE HER I+ D+L G LKQ++ PD
Sbjct: 241 IKFLTEGMLLQELLHDPSLRQYSAVVVDEVHERGIDVDLLCGFLKQMLLS-PDKPGRGGL 299
Query: 435 -LRLIVTSATLDAERFSGYF 453
L+++ SAT + E +F
Sbjct: 300 PLKVVAMSATANIETLENFF 319
Score = 124 (48.7 bits), Expect = 6.2e-96, Sum P(3) = 6.2e-96
Identities = 30/90 (33%), Positives = 52/90 (57%)
Query: 256 SARDMPEWKKNAYGKAFT---FGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIG 312
S +P KK+A G+ + + S+ R++LPI++ + + + + N VLIL+G
Sbjct: 81 SLLSVPSRKKSATGRGASSKPIQAKGDPSLLPLRKALPIWQHQGAIREHLRKNDVLILVG 140
Query: 313 ETGSGKTTQLAQYLAEAGYTTKGKIGCTQP 342
ETGSGK+TQ+ Q+LA+ + ++ T P
Sbjct: 141 ETGSGKSTQVPQFLADEEWCRPRQVIMTLP 170
>ASPGD|ASPL0000001852 [details] [associations]
symbol:AN6085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:BN001301 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:PGQEEID EnsemblFungi:CADANIAT00006930
Uniprot:C8V2M2
Length = 824
Score = 694 (249.4 bits), Expect = 6.9e-96, Sum P(2) = 6.9e-96
Identities = 148/345 (42%), Positives = 220/345 (63%)
Query: 461 IPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEP-EGDILLFLTGQEEIDFACESLCE 519
I GR FPV YS + V D++D+AL + QIH EP GDIL+FLTGQE ++ A E+L
Sbjct: 365 IKGRQFPVKTIYSPEPVHDFVDAALKVIFQIHYKEPIPGDILVFLTGQETVE-ALENLVN 423
Query: 520 KIKALGKD--VPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFY 577
+ A G D +P++ VLP+++ALP Q R+F PAPP RK+++ATNIAE S+T+ G+ Y
Sbjct: 424 EY-ATGMDPSLPKIQVLPLFAALPQAAQQRVFVPAPPRTRKIILATNIAETSVTVSGVRY 482
Query: 578 VIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMS 637
V+D G AK + + LDSL++ PIS+++A+QR GRAGR PG+CYRLYTE Y + +
Sbjct: 483 VVDCGKAKIKQFRTRLGLDSLLVKPISKSAAIQRKGRAGREAPGQCYRLYTEKDYLA-LD 541
Query: 638 PTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLL 697
PEI R +L L MKA G++N++ F F+ P +AL A+ QL S+ ALDE G +
Sbjct: 542 EVNTPEILRCDLSQAILNMKARGVDNVIEFPFLTRPPREALEKALLQLLSIEALDETGKI 601
Query: 698 TKLGKKMAEFPLDPPLSKMLLASVDLG--CSDEILTIIAMIQTGHIF--TRPRERQAKAD 753
++ G +A+ PL P L ++LLA+ D G C +++ II+ + +IF T E++ A+
Sbjct: 602 SETGSHIAKLPLTPTLGRVLLAASDFGPDCLTDVIDIISCLSVENIFLNTTSEEKKEAAE 661
Query: 754 EKRARFFQPEGDHLTLLAVYEAWKAKNFSLP-WCGENFVNSRSLK 797
R ++ EGDHLT+LA A+ ++N W + V+ R+++
Sbjct: 662 AARRDLYRREGDHLTMLATVRAYASENTDRKAWAERHLVSHRAMQ 706
Score = 279 (103.3 bits), Expect = 6.9e-96, Sum P(2) = 6.9e-96
Identities = 91/280 (32%), Positives = 136/280 (48%)
Query: 191 KNPEGSLSRTAAL-QSALTKERREVREQQLRTMIDSIPKDLNRPWEDPMPETGERHLAQE 249
K S S+ AA+ Q+ KE V T+ S+PKD + + +E
Sbjct: 67 KKSNTSESQAAAVEQNENRKEDEAVNNSGEATIAKSLPKDQPENQKHKRKKHSRPFKDEE 126
Query: 250 L-RGVGLS--ARDMPEWKKNAYGKAFTFGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQ 306
R L A+ + E +KN F G I++ R + L E
Sbjct: 127 NGRTASLKKKAQMLYEIRKNL--PIFAHGDE----IRQHLRKNDVMLLIGETGSGKSTQI 180
Query: 307 VLILIGETGSG--KTTQLAQYLAEAGYTTKGKIGCTQPRRVAATSVAKRVAEEFGCRLGE 364
L+ E+ KTT + + ++ G I TQPRRVAA S+A+RVAEE G LG
Sbjct: 181 PQFLVDESWCRPTKTTIVQENGSKKEAVVGGCIAITQPRRVAAISLARRVAEEMGTPLGS 240
Query: 365 -----EVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTD 419
+VGY++RF+ P T +K++T+GMLL+E+L D L++YS I++DE HER +N D
Sbjct: 241 SSPASKVGYSVRFDTSVSPSTRVKFLTEGMLLQEMLHDPWLTKYSAIVVDEVHERGVNVD 300
Query: 420 VLFGLLKQLVKRRPD------LRLIVTSATLDAERFSGYF 453
++ G L+ LV + + L+ +V SAT D E +F
Sbjct: 301 LVMGFLRNLVSGKREGRGGVPLKAVVMSATADMESLQEFF 340
Score = 132 (51.5 bits), Expect = 2.2e-80, Sum P(2) = 2.2e-80
Identities = 40/145 (27%), Positives = 72/145 (49%)
Query: 208 TKERREVREQQLRTMIDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSARDMPE---WK 264
T+ R + + ++ ++ NR ++ + +GE +A+ L +D PE K
Sbjct: 61 TRLHRTKKSNTSESQAAAVEQNENRKEDEAVNNSGEATIAKSL------PKDQPENQKHK 114
Query: 265 KNAYGKAFTF---GQRSKLS-----IQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGS 316
+ + + F G+ + L + E R++LPIF +E+ Q + N V++LIGETGS
Sbjct: 115 RKKHSRPFKDEENGRTASLKKKAQMLYEIRKNLPIFAHGDEIRQHLRKNDVMLLIGETGS 174
Query: 317 GKTTQLAQYLAEAGYTTKGKIGCTQ 341
GK+TQ+ Q+L + + K Q
Sbjct: 175 GKSTQIPQFLVDESWCRPTKTTIVQ 199
Score = 39 (18.8 bits), Expect = 1.4e-70, Sum P(2) = 1.4e-70
Identities = 7/8 (87%), Positives = 7/8 (87%)
Query: 237 PMPETGER 244
P PETGER
Sbjct: 30 PSPETGER 37
>UNIPROTKB|E2RTK2 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:DSDQVFH
GeneTree:ENSGT00700000104421 EMBL:AAEX03000836
Ensembl:ENSCAFT00000006694 Uniprot:E2RTK2
Length = 1177
Score = 951 (339.8 bits), Expect = 1.2e-95, P = 1.2e-95
Identities = 215/545 (39%), Positives = 323/545 (59%)
Query: 274 FGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTT 333
FG+ +KL Q +R +LPI + N ++Q + ++QV+++ G+TG GK+TQ+ QYL AG++
Sbjct: 153 FGRLAKL--QHERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFS- 209
Query: 334 KGKIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLRE 393
+ CTQPRR+A S+AKRV+ E + G +VGY IRFE T I ++T G+LLR+
Sbjct: 210 --HVACTQPRRIACISLAKRVSFESLSQYGSQVGYQIRFESTRTAATKIVFLTVGLLLRQ 267
Query: 394 ILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYF 453
I + +L QY V+++DE HER ++ D L G+L++L+ +RPDL++I+ SAT++ FS YF
Sbjct: 268 IQREPSLPQYQVLIVDEVHERHLHNDFLLGVLRRLLPKRPDLKVILMSATINISLFSSYF 327
Query: 454 FNCNIFSIPGRTFPVDINYSRQEV------TDYLDSA-LITVLQIHVDE---PE--GDIL 501
+ +PGR FP+ + Y QE ++ LD + VL+ +D PE GD+L
Sbjct: 328 GTAPVVQVPGRLFPITVVYQPQEAEPVASKSEKLDPGPFLRVLEA-IDNKYPPEERGDLL 386
Query: 502 LFLTGQEEIDFACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVV 561
+FL+G EI S+ E + VVLP++SAL Q ++F+ APPG RK ++
Sbjct: 387 VFLSGMAEIS----SVLEAAQTYASRTQRWVVLPLHSALSVADQDKVFDVAPPGVRKCIL 442
Query: 562 ATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPG 621
+TNIAE S+TIDGI +V+D G K+ Y+P+ +L L ISQASA QR GRAGRTGPG
Sbjct: 443 STNIAETSVTIDGIRFVVDSGKVKEMGYDPQAKLHRLQEFWISQASAEQRKGRAGRTGPG 502
Query: 622 KCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISA 681
C+RLY ES Y + +P +PEI+R+ L L MK+M + + +F F++PP P +L +A
Sbjct: 503 VCFRLYAESDYDA-FAPYPVPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPPPASLETA 561
Query: 682 MEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHI 741
+ L GALD LT +G +A+ P+D + KML+ ++ +LTI A +
Sbjct: 562 ILYLQDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFHLAEPVLTIAAALSVQSP 621
Query: 742 FTRPRERQAKADEKRARFFQPEGDHLTLLAVYEAW------KAKNFSLPWCGENFVNSRS 795
FTR + + R +GD TL V+ AW +++N S WC +
Sbjct: 622 FTRSAQSNPECAAARRPLESDQGDPFTLFNVFNAWVQVKSERSRN-SRKWCRHRGIEEHR 680
Query: 796 LKKTA 800
L + A
Sbjct: 681 LYEMA 685
>UNIPROTKB|E2RTK4 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AAEX03000836
Ensembl:ENSCAFT00000006692 Uniprot:E2RTK4
Length = 1140
Score = 951 (339.8 bits), Expect = 1.2e-95, P = 1.2e-95
Identities = 215/545 (39%), Positives = 323/545 (59%)
Query: 274 FGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTT 333
FG+ +KL Q +R +LPI + N ++Q + ++QV+++ G+TG GK+TQ+ QYL AG++
Sbjct: 148 FGRLAKL--QHERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFS- 204
Query: 334 KGKIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLRE 393
+ CTQPRR+A S+AKRV+ E + G +VGY IRFE T I ++T G+LLR+
Sbjct: 205 --HVACTQPRRIACISLAKRVSFESLSQYGSQVGYQIRFESTRTAATKIVFLTVGLLLRQ 262
Query: 394 ILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYF 453
I + +L QY V+++DE HER ++ D L G+L++L+ +RPDL++I+ SAT++ FS YF
Sbjct: 263 IQREPSLPQYQVLIVDEVHERHLHNDFLLGVLRRLLPKRPDLKVILMSATINISLFSSYF 322
Query: 454 FNCNIFSIPGRTFPVDINYSRQEV------TDYLDSA-LITVLQIHVDE---PE--GDIL 501
+ +PGR FP+ + Y QE ++ LD + VL+ +D PE GD+L
Sbjct: 323 GTAPVVQVPGRLFPITVVYQPQEAEPVASKSEKLDPGPFLRVLEA-IDNKYPPEERGDLL 381
Query: 502 LFLTGQEEIDFACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVV 561
+FL+G EI S+ E + VVLP++SAL Q ++F+ APPG RK ++
Sbjct: 382 VFLSGMAEIS----SVLEAAQTYASRTQRWVVLPLHSALSVADQDKVFDVAPPGVRKCIL 437
Query: 562 ATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPG 621
+TNIAE S+TIDGI +V+D G K+ Y+P+ +L L ISQASA QR GRAGRTGPG
Sbjct: 438 STNIAETSVTIDGIRFVVDSGKVKEMGYDPQAKLHRLQEFWISQASAEQRKGRAGRTGPG 497
Query: 622 KCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISA 681
C+RLY ES Y + +P +PEI+R+ L L MK+M + + +F F++PP P +L +A
Sbjct: 498 VCFRLYAESDYDA-FAPYPVPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPPPASLETA 556
Query: 682 MEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHI 741
+ L GALD LT +G +A+ P+D + KML+ ++ +LTI A +
Sbjct: 557 ILYLQDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFHLAEPVLTIAAALSVQSP 616
Query: 742 FTRPRERQAKADEKRARFFQPEGDHLTLLAVYEAW------KAKNFSLPWCGENFVNSRS 795
FTR + + R +GD TL V+ AW +++N S WC +
Sbjct: 617 FTRSAQSNPECAAARRPLESDQGDPFTLFNVFNAWVQVKSERSRN-SRKWCRHRGIEEHR 675
Query: 796 LKKTA 800
L + A
Sbjct: 676 LYEMA 680
>TAIR|locus:2125211 [details] [associations]
symbol:AT4G01020 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR002867
InterPro:IPR004087 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF01485 Pfam:PF04408 PROSITE:PS00028 PROSITE:PS00690
PROSITE:PS50089 PROSITE:PS50157 PROSITE:PS51194 SMART:SM00184
SMART:SM00322 SMART:SM00355 SMART:SM00490 SMART:SM00647
SMART:SM00847 Pfam:PF00097 Prosite:PS00518 GO:GO:0005524
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 HSSP:P38398 GO:GO:0008026
EMBL:AL161491 EMBL:AL080237 KO:K12818 PIR:T10542 IPI:IPI00547897
RefSeq:NP_567206.1 UniGene:At.42970 ProteinModelPortal:P0CE10
SMR:P0CE10 PRIDE:P0CE10 EnsemblPlants:AT4G01020.1 GeneID:826439
KEGG:ath:AT4G01020 GeneFarm:1806 TAIR:At4g01020
HOGENOM:HOG000084497 PhylomeDB:P0CE10 Uniprot:P0CE10
Length = 1787
Score = 958 (342.3 bits), Expect = 3.3e-95, P = 3.3e-95
Identities = 216/540 (40%), Positives = 322/540 (59%)
Query: 280 LSIQEQRR---SLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGK 336
L ++E RR LPI+ + ++++ +H Q+++LIGETGSGK+TQL Q+LA++G
Sbjct: 291 LILRECRRLEDGLPIYAYRRQILKKIHCEQIMVLIGETGSGKSTQLVQFLADSGVAASES 350
Query: 337 IGCTQPRRVAATSVAKRVAEEF-GCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREIL 395
I CTQPR++AA ++ RV EE GC V F + + YMTD LL+ +
Sbjct: 351 IVCTQPRKIAAMTLTDRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYM 410
Query: 396 IDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFN 455
D +LS S +++DEAHER++NTD+L LL++L+ RR DLRL++ SAT DA + S Y F+
Sbjct: 411 KDRSLSGISCVIIDEAHERSLNTDLLLALLRKLLSRRIDLRLVIMSATADANQLSQYLFD 470
Query: 456 CNIFSIPGRTFPVDINYS---RQE------VTDYLDSALITVLQIHVDEPEGDILLFLTG 506
C I + GR FPV+I YS +E + Y + ++IH E EG IL FLT
Sbjct: 471 CGILHVNGRNFPVEIVYSPSGTEENSVVGRIASYAGDVVKMAVEIHKTEKEGTILAFLTS 530
Query: 507 QEEIDFACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIA 566
Q E+++ACE P + LP++ L E Q +F+ P G RKV+ ATNIA
Sbjct: 531 QAEVEWACERFV---------APSAIALPLHGKLSFEEQFMVFQNYP-GRRKVIFATNIA 580
Query: 567 EASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRL 626
E SLTI G+ YVID G K++ Y P+ + L + +SQ+SA QRAGRAGRT PG+CYRL
Sbjct: 581 ETSLTIPGVKYVIDSGMVKESKYEPRTGMSILKVCQVSQSSARQRAGRAGRTEPGRCYRL 640
Query: 627 YTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLY 686
Y+++ + S M+ PEI+R++L L M A+GI+N+ +F+FVD P P+A+ A++ L
Sbjct: 641 YSKTDFDS-MNLNQEPEIRRVHLGVALLRMLALGIDNIAAFEFVDAPVPEAIAMAIQNLV 699
Query: 687 SLGALDEE-GLL--TKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIA-MIQTGHIF 742
LGA+ E+ G+L T+ G + + L+P L K++L E + + A M IF
Sbjct: 700 QLGAVVEKNGVLELTQEGHCLVKLGLEPKLGKLILGCFRHRMGKEGIVLAAVMANASSIF 759
Query: 743 TRPR--ERQAKADEKRARFFQPEGDHLTLLAVYEAWKA--KNFSLPWCGENFVNSRSLKK 798
R + + KAD + +F GD TLL+VY+ W + ++ WC EN +N++S+++
Sbjct: 760 CRVGNFDDKMKADRLKVQFCNDNGDLFTLLSVYKEWASLPRDRRNKWCWENSLNAKSMRR 819
>MGI|MGI:1918973 [details] [associations]
symbol:Dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide 34"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00355 SMART:SM00490 SMART:SM00847
MGI:MGI:1918973 GO:GO:0005524 GO:GO:0008270 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
CTD:9704 HOGENOM:HOG000232193 ChiTaRS:DHX34 EMBL:AK129062
EMBL:AK004733 IPI:IPI00113303 RefSeq:NP_082159.3 UniGene:Mm.75259
ProteinModelPortal:Q9DBV3 SMR:Q9DBV3 PhosphoSite:Q9DBV3
PaxDb:Q9DBV3 PRIDE:Q9DBV3 Ensembl:ENSMUST00000094816
Ensembl:ENSMUST00000163968 GeneID:71723 KEGG:mmu:71723
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 NextBio:334335
Bgee:Q9DBV3 CleanEx:MM_DHX34 Genevestigator:Q9DBV3
GermOnline:ENSMUSG00000006019 Uniprot:Q9DBV3
Length = 1145
Score = 941 (336.3 bits), Expect = 1.4e-94, P = 1.4e-94
Identities = 214/544 (39%), Positives = 321/544 (59%)
Query: 274 FGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTT 333
FG+ +KL Q +R +LPI + N ++Q + ++QV+++ G+TG GK+TQ+ QYL AG++
Sbjct: 151 FGRLAKL--QRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFS- 207
Query: 334 KGKIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLRE 393
+ CTQPRR+A S+AKRV E + G +VGY IRFE T I ++T G+LLR+
Sbjct: 208 --HVACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQ 265
Query: 394 ILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYF 453
I + +L QY V+++DE HER ++ D L G+L++L+ +RPDL++I+ SAT++ FS YF
Sbjct: 266 IQREPSLPQYQVLIVDEVHERHLHNDFLLGVLQRLLPQRPDLKVILMSATINISLFSSYF 325
Query: 454 FNCNIFSIPGRTFPVDINYSRQEV------TDYLDSA-LITVLQIHVDE---PE--GDIL 501
+ + +PGR FP+ + Y QE ++ LD + VL+ +D PE GD+L
Sbjct: 326 SHAPVVQVPGRLFPITVVYQPQEADQTASKSEKLDPRPFLRVLEA-IDNKYPPEERGDLL 384
Query: 502 LFLTGQEEIDFACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVV 561
+FL+G EI ++ + +A VVLP++SAL Q ++F+ AP G RK ++
Sbjct: 385 VFLSGMAEIT----TVLDAAQAYASLTQRWVVLPLHSALSVSDQDKVFDVAPAGVRKCIL 440
Query: 562 ATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPG 621
+TNIAE S+TIDGI +V+D G K+ Y+P+ +L L ISQASA QR GRAGRTGPG
Sbjct: 441 STNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGPG 500
Query: 622 KCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISA 681
CYRLY ES Y + +P +PEI+R+ L L MK+M + + +F F++PP P ++ +A
Sbjct: 501 VCYRLYAESDYDA-FAPYPVPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPPPASVETA 559
Query: 682 MEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHI 741
+ L GALD LT +G +A+ P+D + KML+ ++ +LTI A +
Sbjct: 560 ILYLQEQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLAEPVLTIAAALSVQSP 619
Query: 742 FTRPRERQAKADEKRARFFQPEGDHLTLLAVYEAW---KAKNF--SLPWCGENFVNSRSL 796
FTR + R +GD TL V+ AW K++ S WC V L
Sbjct: 620 FTRSAQSNLDCATARRPLESDQGDPFTLFNVFNAWVQVKSERSGNSRKWCRRRGVEEHRL 679
Query: 797 KKTA 800
+ A
Sbjct: 680 YEMA 683
>UNIPROTKB|P43329 [details] [associations]
symbol:hrpA species:83333 "Escherichia coli K-12"
[GO:0004386 "helicase activity" evidence=IEA;IMP] [GO:0009451 "RNA
modification" evidence=IMP] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0006397 "mRNA processing"
evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006397 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:D42105
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0009451 PIR:H64892 RefSeq:NP_415931.4 RefSeq:YP_489680.1
ProteinModelPortal:P43329 SMR:P43329 DIP:DIP-9937N IntAct:P43329
MINT:MINT-1229564 PRIDE:P43329 EnsemblBacteria:EBESCT00000000014
EnsemblBacteria:EBESCT00000015011 GeneID:12932513 GeneID:948444
KEGG:ecj:Y75_p1389 KEGG:eco:b1413 PATRIC:32118112 EchoBASE:EB2772
EcoGene:EG12936 HOGENOM:HOG000247272 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 BioCyc:EcoCyc:G6732-MONOMER
BioCyc:ECOL316407:JW5905-MONOMER Genevestigator:P43329
InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967 Uniprot:P43329
Length = 1300
Score = 940 (336.0 bits), Expect = 1.8e-94, P = 1.8e-94
Identities = 208/497 (41%), Positives = 305/497 (61%)
Query: 288 SLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCTQPRRVAA 347
+LP+ + K ++++A+ D+QV+I+ GETGSGKTTQL + E G KG IG TQPRR+AA
Sbjct: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAA 135
Query: 348 TSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIM 407
+VA R+AEE G +GY +RF D +T++K MTDG+LL EI D L QY I+
Sbjct: 136 RTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTII 195
Query: 408 LDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFP 467
+DEAHER++N D L G LK+L+ RRPDL++I+TSAT+D ERFS +F N I + GRT+P
Sbjct: 196 IDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYP 255
Query: 468 VDINYSR--QEVTDYLDSALITVLQIHVDE----PEGDILLFLTGQEEIDFACESLCEKI 521
V++ Y +E D L + VDE GDIL+F++G+ EI ++L K+
Sbjct: 256 VEVRYRPIVEEADDTERDQLQAIFDA-VDELSQESHGDILIFMSGEREIRDTADAL-NKL 313
Query: 522 KALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDP 581
++ +LP+Y+ L + Q+R+F+ GR++V+ATN+AE SLT+ GI YVIDP
Sbjct: 314 -----NLRHTEILPLYARLSNSEQNRVFQSH--SGRRIVLATNVAETSLTVPGIKYVIDP 366
Query: 582 GFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTI 641
G A+ + Y+ + ++ L I PISQASA QR GR GR G C RLY+E + S T
Sbjct: 367 GTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTD- 425
Query: 642 PEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGAL--DEEGL--- 696
PEI R NL L M A+G+ ++ +F FV+ P + + + L LGA+ DE+
Sbjct: 426 PEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYK 485
Query: 697 LTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKR 756
LT LG+++++ P+DP L++M+L + GC E + I + + RP ++Q +DEK
Sbjct: 486 LTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKH 545
Query: 757 ARFFQPEGDHLTLLAVY 773
RF E D L + ++
Sbjct: 546 RRFHDKESDFLAFVNLW 562
>ZFIN|ZDB-GENE-061207-30 [details] [associations]
symbol:dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide
34" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IMP] [GO:0009790 "embryo
development" evidence=IMP] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR015880
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-061207-30 GO:GO:0005524
GO:GO:0000184 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
GO:GO:0009790 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
CTD:9704 HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 EMBL:BX908775
IPI:IPI00503372 RefSeq:NP_001121805.1 UniGene:Dr.50626
Ensembl:ENSDART00000086943 GeneID:555838 KEGG:dre:555838
InParanoid:A2BIE5 NextBio:20881188 Uniprot:A2BIE5
Length = 1150
Score = 932 (333.1 bits), Expect = 1.3e-93, P = 1.3e-93
Identities = 208/527 (39%), Positives = 313/527 (59%)
Query: 278 SKLS-IQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGK 336
SKLS ++ +++SLPIF+ ++++++ V + V+++ G+TG GK+TQ+ QYL +G
Sbjct: 150 SKLSKLRREQKSLPIFQYRDKIVELVRTHPVVVVAGDTGCGKSTQVPQYLLASGINN--- 206
Query: 337 IGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILI 396
I CTQPRR+A S+AKRV+ E + G +VGY IRFE T + ++T+G+LLR+I
Sbjct: 207 IACTQPRRIACISLAKRVSFESLNQYGSKVGYQIRFETSRTLATKLLFLTEGLLLRQIQQ 266
Query: 397 DENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNC 456
D +L QY V+++DE HER ++ D L G+L+ L+ RPDLRL++ SAT++ + FS YF +
Sbjct: 267 DASLGQYQVLIVDEVHERHLHCDFLLGVLRSLLSLRPDLRLVLMSATINIKLFSSYFNDA 326
Query: 457 NIFSIPGRTFPVDINY---------SRQEVTD---YLDSALITVLQIHVDEPEGDILLFL 504
+ +PGR FP+ + Y SR E D YL L + Q + E GD+LLFL
Sbjct: 327 PVLQVPGRLFPIQVIYQPIPPEEQVSRSEKLDPRPYL-RVLQGIDQRYPQEERGDLLLFL 385
Query: 505 TGQEEIDFACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATN 564
+G EI E+ C+ +VLP++S L Q ++F+ APPG RK +++TN
Sbjct: 386 SGVAEISTIQEA-CQ---TYATHTQRWIVLPLHSTLSLAQQDKVFDIAPPGVRKCIISTN 441
Query: 565 IAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCY 624
IAE S+TIDG+ +V+D G K+ ++PK ++ L IS+AS+ QR GRAGRTGPG CY
Sbjct: 442 IAETSVTIDGVRFVVDSGKVKEMSFDPKAKMQRLQEFWISRASSEQRKGRAGRTGPGVCY 501
Query: 625 RLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQ 684
RLY+ES Y + +P +PEI R+ L L MK+MG+ + +F F+DPP ++ +A+
Sbjct: 502 RLYSESDYDA-FAPYPVPEIHRVALDSLILQMKSMGLGDPRTFTFIDPPPASSIQTAVTY 560
Query: 685 LYSLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTR 744
L GALDE G LT +G+ +A+ P+D + KML+ + +LT+ A + F R
Sbjct: 561 LREQGALDEHGELTSIGRLLAQLPVDVVIGKMLVLGSVFNLVEPVLTVAAALSVQSPFLR 620
Query: 745 PRERQAKADEKRARFFQPEGDHLTLLAVYEAW---KAK--NFSLPWC 786
+ R GD TL+ + AW KA + S WC
Sbjct: 621 SAQHNPDCSTARQPLNSNHGDPFTLMNTFNAWVQVKADRGSGSRKWC 667
>UNIPROTKB|F1RLY9 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00355 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:9704 OMA:DSDQVFH GeneTree:ENSGT00700000104421
EMBL:FP102420 RefSeq:XP_003127294.1 Ensembl:ENSSSCT00000003454
GeneID:100515780 KEGG:ssc:100515780 Uniprot:F1RLY9
Length = 1146
Score = 918 (328.2 bits), Expect = 3.9e-92, P = 3.9e-92
Identities = 234/628 (37%), Positives = 349/628 (55%)
Query: 199 RTAALQSALTKERREVREQQLRTMIDSIPKDLNRPWEDPMPETGERHL---AQELRG-VG 254
R QS ++E +LR I ++ DL P DP L AQ+ RG G
Sbjct: 66 RMQRFQSLRATGKQEEEAGRLRHCIPALA-DLP-PTYDPRYRINLSILGPDAQDARGPAG 123
Query: 255 -LSARDMPEWKKNAYGKAFTFGQR---SKLS-IQEQRRSLPIFKLKNELIQAVHDNQVLI 309
L + E++ A FGQ+ ++L+ +Q +R +LPI + ++ ++Q + ++QV++
Sbjct: 124 SLPPERVSEFR-GALLHYLDFGQKQAFARLARLQRERAALPISQYRDRILQTLKEHQVVV 182
Query: 310 LIGETGSGKTTQLAQYLAEAGYTTKGKIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYA 369
+ G+TG GK+TQ+ QYL AG++ + CTQPRR+A S+AKRV E + G +VGY
Sbjct: 183 VAGDTGCGKSTQVPQYLLAAGFS---HVACTQPRRIACISLAKRVGLESLSQYGSQVGYQ 239
Query: 370 IRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLV 429
IRFE T I ++T G+LLR + + L QY V+++DE HER ++ D L G+L++L+
Sbjct: 240 IRFESTRSAATKIVFLTVGLLLRHVQREPTLPQYRVLIVDEVHERHLHNDFLLGVLQRLL 299
Query: 430 KRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPVDINYSRQEVT------DYLDS 483
RRPDL++I+ SAT++ FS YF + +PGR FP+ + Y QE + LD
Sbjct: 300 PRRPDLKVILMSATVNTSLFSAYFGQAPVVQVPGRLFPITVVYQPQEAEPTASTLEKLDP 359
Query: 484 A-LITVLQIHVDE---PE--GDILLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPVY 537
I VL+ +D PE GD+L+FL+G EI E+ + G+ VVLP++
Sbjct: 360 RPFIRVLEA-IDSKYPPEERGDLLVFLSGLAEIGAVLEAAQAHARRSGR----WVVLPLH 414
Query: 538 SALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDS 597
S L Q ++F+ APPG RK +++TNIAE S+TIDGI +V+D G K+ Y+P+ +L
Sbjct: 415 STLSVAAQDKVFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQR 474
Query: 598 LVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMK 657
L ISQASA QR GRAGRTGPG C+RLY ES Y + +P +PEI+R+ L L MK
Sbjct: 475 LQEFWISQASAEQRKGRAGRTGPGVCFRLYAESDYDA-FAPYPVPEIRRVALDALVLQMK 533
Query: 658 AMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLSKML 717
+M + + +F F++PP +L +A+ L GALD LT +G +A+ P+D + KML
Sbjct: 534 SMSVGDPRTFPFIEPPPAASLETAILYLRDQGALDGSEALTPIGSLLAQLPVDIVIGKML 593
Query: 718 LASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQPEGDHLTLLAVYEAW- 776
+ L ++ +LTI A + FTR K + GD TL V+ W
Sbjct: 594 VLGSVLHLAEPVLTIAAALSVQSPFTRSTRSNPKCAWRALE--SDHGDPFTLFNVFNNWV 651
Query: 777 KAKNF----SLPWCGENFVNSRSLKKTA 800
+ K+ S WC + L + A
Sbjct: 652 QVKSDRSTKSRRWCRREGIEEHRLYEMA 679
>SGD|S000004735 [details] [associations]
symbol:ECM16 "Essential DEAH-box ATP-dependent RNA helicase
specific to U3 snoRNP" species:4932 "Saccharomyces cerevisiae"
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0042254 "ribosome biogenesis"
evidence=IEA;IDA;TAS] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0030686 "90S
preribosome" evidence=IDA] [GO:0003724 "RNA helicase activity"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000004735 GO:GO:0005739 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 EMBL:BK006946 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0030686 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0032040 GO:GO:0008026
GO:GO:0003724 GO:GO:0000462 EMBL:Z48622 PIR:S53058
RefSeq:NP_013847.1 ProteinModelPortal:Q04217 SMR:Q04217
DIP:DIP-6722N IntAct:Q04217 MINT:MINT-614026 STRING:Q04217
PaxDb:Q04217 PeptideAtlas:Q04217 PRIDE:Q04217 EnsemblFungi:YMR128W
GeneID:855158 KEGG:sce:YMR128W CYGD:YMR128w
GeneTree:ENSGT00550000074985 HOGENOM:HOG000201240 KO:K14780
OMA:HQLKREE OrthoDB:EOG4KM2B8 NextBio:978575 Genevestigator:Q04217
GermOnline:YMR128W Uniprot:Q04217
Length = 1267
Score = 506 (183.2 bits), Expect = 4.4e-91, Sum P(3) = 4.4e-91
Identities = 121/278 (43%), Positives = 169/278 (60%)
Query: 254 GLSARDMPEWKKNAYGKAFTFGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGE 313
GL +P +N+ KAF IQ+ R LP+F ++++++A+H N V+I+ GE
Sbjct: 357 GLQEAYVPI-NENSTRKAFYVEVSRSDEIQKARIQLPVFGEEHKIMEAIHHNDVVIICGE 415
Query: 314 TGSGKTTQLAQYLAEAGYTTK------GKIGCTQPRRVAATSVAKRVAEEFGCRLGEEVG 367
TGSGKTTQ+ Q+L EAG+ + G +G TQPRRVAA S+A+RVA E G G +VG
Sbjct: 416 TGSGKTTQVPQFLYEAGFGAEDSPDYPGMVGITQPRRVAAVSMAERVANELGDH-GHKVG 474
Query: 368 YAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQ 427
Y IRF+ DT +K+MTDG+LLRE++ D L++YS I++DEAHER INTD+L G+L +
Sbjct: 475 YQIRFDSTAKEDTKVKFMTDGVLLREMMHDFKLTKYSSIIIDEAHERNINTDILIGMLSR 534
Query: 428 LVKRR-------P----DLRLIVTSATLDAERFSGY--FFNCN--IFSIPGRTFPVDINY 472
V+ R P L+LI+ SATL FS F + + R FPV I++
Sbjct: 535 CVRLRAKLHKENPIEHKKLKLIIMSATLRVSDFSENKTLFPIAPPVLQVDARQFPVSIHF 594
Query: 473 SRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEI 510
+R+ +Y D A +IH P G IL+FLTGQ+EI
Sbjct: 595 NRRTAFNYTDEAFRKTCKIHQKLPPGAILVFLTGQQEI 632
Score = 486 (176.1 bits), Expect = 4.4e-91, Sum P(3) = 4.4e-91
Identities = 113/276 (40%), Positives = 164/276 (59%)
Query: 469 DINYSRQEVT-DYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEKIKALGKD 527
DI++S Q + D SA I +E EG+ G++E D E E++ G+
Sbjct: 675 DIDFSVQVIDQDKFKSA------IRYEEDEGNSG---NGEDEEDEEEEGF-EEVLTEGQT 724
Query: 528 VPE-LVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQ 586
+ L VLP+YS LP++ Q R+F+ P G R +VATN+AE SLTI G+ YV+D G +K+
Sbjct: 725 ANDPLYVLPLYSLLPTKEQMRVFQKPPQGSRLCIVATNVAETSLTIPGVRYVVDSGRSKE 784
Query: 587 NVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQR 646
YN + S + +S+ASA QR+GRAGRTGPG CYRLY+ + + + + PEI R
Sbjct: 785 RKYNESNGVQSFEVGWVSKASANQRSGRAGRTGPGHCYRLYSSAVFEHDFEQFSKPEILR 844
Query: 647 INLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAE 706
+ + L MK+M I+N+++F F PP AL A++ L LGALD + ++T+ GKKM+
Sbjct: 845 MPVESIVLQMKSMAIHNIINFPFPTPPDRVALSKAIQLLQYLGALDNKEMITEDGKKMSL 904
Query: 707 FPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIF 742
FPL P SKMLL S + C I+ I++ + G F
Sbjct: 905 FPLSPRFSKMLLVSDEKACLPYIVAIVSALSVGDPF 940
Score = 40 (19.1 bits), Expect = 4.4e-91, Sum P(3) = 4.4e-91
Identities = 12/73 (16%), Positives = 30/73 (41%)
Query: 83 KLQSKKKSGRDRKTNYKAEFENDRERSGRYCKSNPPMLKDMPVSRMGGVSGVLASNEYPR 142
+++ KK G++ + ++ E+D E + + + + P+ + S ++ +
Sbjct: 253 EMEELKKHGKEDEMDFDTTSEDDDEEEDQE-EEDKMHPSENPLEEVESADSETGSEKFDQ 311
Query: 143 YDXXXXXGFASWA 155
D F WA
Sbjct: 312 NDVANE--FKDWA 322
>WB|WBGene00020263 [details] [associations]
symbol:T05E8.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0007413
"axonal fasciculation" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0006898 GO:GO:0040010
GO:GO:0040011 GO:GO:0003676 GO:GO:0040035 GO:GO:0007413
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO080463 PIR:T29623
RefSeq:NP_491604.3 ProteinModelPortal:O01598 SMR:O01598
STRING:O01598 PaxDb:O01598 EnsemblMetazoa:T05E8.3 GeneID:172199
KEGG:cel:CELE_T05E8.3 UCSC:T05E8.3 CTD:172199 WormBase:T05E8.3
InParanoid:O01598 OMA:KEGCIME NextBio:874451 Uniprot:O01598
Length = 856
Score = 903 (322.9 bits), Expect = 1.5e-90, P = 1.5e-90
Identities = 201/490 (41%), Positives = 291/490 (59%)
Query: 286 RRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCTQPRRV 345
R LPI ++ +L+ + + LI+IGETGSGK+TQ+ Q AG G I TQPRRV
Sbjct: 158 RPQLPIDAVEQQLMYELASQETLIVIGETGSGKSTQVPQLCVRAGIANSGSIAVTQPRRV 217
Query: 346 AATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSV 405
AA S+A RVA E G +G VGY +RFE+ T T I+YMTDG++LR+ L+ L +YS
Sbjct: 218 AAISLASRVATEMGTNIGGIVGYHVRFENATCHKTKIEYMTDGIVLRKALVSPLLDKYSC 277
Query: 406 IMLDEAHERTINTDVLFGLLKQLVKRRPD----LRLIVTSATLDAERFSGYFFNCNIFSI 461
+++DEAHER++++DVL +L+Q +R + LRLI+ SATL AE+F YF N + +
Sbjct: 278 VIIDEAHERSLHSDVLMCILRQCQDQRRETNNPLRLIIMSATLQAEKFQSYFNNAKVVLV 337
Query: 462 PGRTFPVDINYSRQEV------TDYLDSALITVLQIHVDEPEG-DILLFLTGQEEIDFAC 514
GRTFP+++ + ++ TDY+ +A+I V +H+ EP+G DIL+FLTG EEI+
Sbjct: 338 AGRTFPIEVFHVNPKINKSFSSTDYVYNAVICVKYVHLTEPKGRDILVFLTGSEEIEAVA 397
Query: 515 ESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDG 574
L E +L L+ +P+Y+AL E Q F P G RKV+++TNIAE S+TI G
Sbjct: 398 SQLAELNGSLPASADVLMPVPLYAALRPEKQKEAFRKTPQGARKVIISTNIAETSVTIPG 457
Query: 575 IFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRS 634
I VID G K + R+D L + +S+A A QRAGRAGR PGKCYRLY+ +
Sbjct: 458 IRVVIDSGKVKTKRFEAFNRIDVLKVHNVSKAQAKQRAGRAGRDAPGKCYRLYSREDFH- 516
Query: 635 EMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGAL--- 691
+ +PEI R NL T L + +G+ N +DPP + +A+ +L SLGA+
Sbjct: 517 KFEAENMPEILRCNLSATFLELMKLGMKNPHRLKLIDPPETDNINAALLELTSLGAIRPV 576
Query: 692 --DEEGL-LTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRER 748
D LT++G +PL P +++L + GC E + I+A +QT +F+ +
Sbjct: 577 NSDRSKFALTEMGDAFCMYPLPPDHARILFQAQKEGCIMEAIKIVAAMQTDALFSGAGDS 636
Query: 749 QAKADEKRAR 758
++ AD R R
Sbjct: 637 KSDADVDRIR 646
Score = 601 (216.6 bits), Expect = 1.9e-58, P = 1.9e-58
Identities = 139/351 (39%), Positives = 200/351 (56%)
Query: 435 LRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPVDINYSRQEV------TDYLDSALITV 488
LRLI+ SATL AE+F YF N + + GRTFP+++ + ++ TDY+ +A+I V
Sbjct: 311 LRLIIMSATLQAEKFQSYFNNAKVVLVAGRTFPIEVFHVNPKINKSFSSTDYVYNAVICV 370
Query: 489 LQIHVDEPEG-DILLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPVYSALPSEIQSR 547
+H+ EP+G DIL+FLTG EEI+ L E +L L+ +P+Y+AL E Q
Sbjct: 371 KYVHLTEPKGRDILVFLTGSEEIEAVASQLAELNGSLPASADVLMPVPLYAALRPEKQKE 430
Query: 548 IFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQAS 607
F P G RKV+++TNIAE S+TI GI VID G K + R+D L + +S+A
Sbjct: 431 AFRKTPQGARKVIISTNIAETSVTIPGIRVVIDSGKVKTKRFEAFNRIDVLKVHNVSKAQ 490
Query: 608 ALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSF 667
A QRAGRAGR PGKCYRLY+ + + +PEI R NL T L + +G+ N
Sbjct: 491 AKQRAGRAGRDAPGKCYRLYSREDFH-KFEAENMPEILRCNLSATFLELMKLGMKNPHRL 549
Query: 668 DFVDPPSPQALISAMEQLYSLGAL-----DEEGL-LTKLGKKMAEFPLDPPLSKMLLASV 721
+DPP + +A+ +L SLGA+ D LT++G +PL P +++L +
Sbjct: 550 KLIDPPETDNINAALLELTSLGAIRPVNSDRSKFALTEMGDAFCMYPLPPDHARILFQAQ 609
Query: 722 DLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRAR--FFQPEGDHLTLL 770
GC E + I+A +QT +F+ + ++ AD R R F EGDH+TLL
Sbjct: 610 KEGCIMEAIKIVAAMQTDALFSGAGDSKSDADVDRIRRRFETREGDHITLL 660
>CGD|CAL0004556 [details] [associations]
symbol:orf19.2090 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0032040 "small-subunit
processome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 CGD:CAL0004556 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AACQ01000031
EMBL:AACQ01000030 KO:K14780 RefSeq:XP_719536.1 RefSeq:XP_719660.1
STRING:Q5ACX7 GeneID:3638741 GeneID:3638820 KEGG:cal:CaO19.2090
KEGG:cal:CaO19.9637 Uniprot:Q5ACX7
Length = 1263
Score = 497 (180.0 bits), Expect = 3.1e-89, Sum P(3) = 3.1e-89
Identities = 135/347 (38%), Positives = 192/347 (55%)
Query: 194 EGSLSRTAALQSALTKERREVREQQLRTMIDSIPKDLNRPWEDPMPETGERHLAQELRGV 253
E L ++ S +E EQQ+R M + K++ P + E +++ Q +R
Sbjct: 347 ESKLMKSKPRHSTTAASFKEWAEQQVRIM-EGRDKNVLTP--EVSEEIKKKYSKQTVRDE 403
Query: 254 GLSARDMPEW----KKNAYGKAFTFGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLI 309
+ E K +AF SIQ+QR LP+F ++ +++AV+ + +I
Sbjct: 404 DVDHSSDEEGYIPINKEMQRRAFVVEVNRTDSIQQQRALLPVFAEEHRIMEAVYHHDCII 463
Query: 310 LIGETGSGKTTQLAQYLAEAGYTT------KGKIGCTQPRRVAATSVAKRVAEEFGCRLG 363
L GETGSGKTTQ+ Q+L EAG+ G IG TQPRRVAA S+A+RV E G G
Sbjct: 464 LCGETGSGKTTQVPQFLYEAGFGNLLHDLYPGMIGVTQPRRVAAVSMAERVGSELGDH-G 522
Query: 364 EEVGYAIRFEDCT---GPD--TVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINT 418
VGY IRF+ G + T +K+MTDG+LLRE++ D L++YS I++DEAHER INT
Sbjct: 523 HRVGYQIRFDTTIKNEGKENGTALKFMTDGVLLREMMTDFLLAKYSAIIIDEAHERNINT 582
Query: 419 DVLFGLLKQLVKRR-------PDL----RLIVTSATLDAERFSGY--FFNCN--IFSIPG 463
D+L G+L ++VK R P L +LI+ SATL FS F I ++
Sbjct: 583 DILIGMLTRVVKLRRKYHKENPQLYKPLKLIIMSATLRVSDFSENPALFKTPPPIINVQA 642
Query: 464 RTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEI 510
R +PV I+++++ DYL+ A +IH PEG IL+FLTGQ EI
Sbjct: 643 RQYPVSIHFNKKTNYDYLEEAFKKTCKIHRKLPEGGILIFLTGQNEI 689
Score = 481 (174.4 bits), Expect = 3.1e-89, Sum P(3) = 3.1e-89
Identities = 107/260 (41%), Positives = 152/260 (58%)
Query: 508 EEIDFACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAE 567
EE + E E I + +V L VLP+YS LP++ Q ++FE PPG R +VATN+AE
Sbjct: 748 EENEEEEEGFEESIDSKESEVGPLYVLPLYSLLPTKQQMKVFEDPPPGSRICIVATNVAE 807
Query: 568 ASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLY 627
SLTI GI YV+D G +K+ YN + + S + +S+ASA QRAGRAGRTGPG CYRLY
Sbjct: 808 TSLTIPGIRYVVDCGRSKERKYNQENGVQSFEVDWVSKASANQRAGRAGRTGPGHCYRLY 867
Query: 628 TESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYS 687
+ + + ++PEI R+ L+MK+MGI+ + +F F PP +L A E L
Sbjct: 868 SSAVFEDFFPQFSVPEILRMPFESIVLSMKSMGIDQIANFPFPTPPDRFSLKKAEELLVI 927
Query: 688 LGALD-EEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPR 746
LGALD E+ +T LGKKM+ FPL P +K+L+ C I+ I++ + G F
Sbjct: 928 LGALDKEQKQITDLGKKMSLFPLSPRFAKILIIGNQQECLSYIIAIVSALSVGDPFIGEN 987
Query: 747 ERQAKADEKRARFFQPEGDH 766
E +++ R F+ + H
Sbjct: 988 ELVGNMNDEARREFRTKFYH 1007
Score = 44 (20.5 bits), Expect = 1.8e-43, Sum P(3) = 1.8e-43
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 517 LCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGI 575
+ E+I+ L K V +V + SA +++ ++ P P +K V A AS ID +
Sbjct: 1052 MMEEIQKLRKQVGNIVENMIMSADGLQLEQKVKLPIP--NKKQVSAMKQMIASGFIDQV 1108
Score = 40 (19.1 bits), Expect = 4.6e-43, Sum P(3) = 4.6e-43
Identities = 15/53 (28%), Positives = 26/53 (49%)
Query: 643 EIQRINL-VHTTLTMKAMGINNLLSFDFVDPPSP-QALISAMEQLYSLGALDE 693
EIQ++ V + M + L V P P + +SAM+Q+ + G +D+
Sbjct: 1055 EIQKLRKQVGNIVENMIMSADGLQLEQKVKLPIPNKKQVSAMKQMIASGFIDQ 1107
Score = 38 (18.4 bits), Expect = 3.1e-89, Sum P(3) = 3.1e-89
Identities = 17/68 (25%), Positives = 28/68 (41%)
Query: 40 ESGRNSETVEIFDDKLKEYGADLPNYLVRTLFNVIH--TILHPKPKLQSKKKSGRDRKTN 97
E G T D++ K++G + + VI T PK K +K+ + K
Sbjct: 195 EEGEQRST--FVDNRPKKFGGQGSGFGFANI-PVIKKDTTEIPKKKYSWRKRVEEEEKKR 251
Query: 98 YKAEFEND 105
K E ++D
Sbjct: 252 LKKEDDDD 259
>POMBASE|SPAPB1A10.06c [details] [associations]
symbol:SPAPB1A10.06c "ATP-dependent RNA helicase Dhr1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISM] [GO:0005524 "ATP binding" evidence=ISM] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0030490 "maturation of SSU-rRNA" evidence=ISO] [GO:0032040
"small-subunit processome" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAPB1A10.06c
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 GO:GO:0032040
GO:GO:0030490 HOGENOM:HOG000201240 KO:K14780 OMA:HQLKREE
OrthoDB:EOG4KM2B8 EMBL:AB027915 RefSeq:NP_593520.1
ProteinModelPortal:Q9HDY4 STRING:Q9HDY4
EnsemblFungi:SPAPB1A10.06c.1 GeneID:2543371 KEGG:spo:SPAPB1A10.06c
NextBio:20804386 Uniprot:Q9HDY4
Length = 1183
Score = 499 (180.7 bits), Expect = 3.4e-89, Sum P(4) = 3.4e-89
Identities = 116/258 (44%), Positives = 159/258 (61%)
Query: 282 IQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTK-----GK 336
IQE R +LPI + +++ + N V+I+ G TGSGKTTQL Q+L EAG+++ G
Sbjct: 391 IQESRLALPIVAEEQRIMEQIFANDVVIICGATGSGKTTQLPQFLFEAGFSSPESENPGM 450
Query: 337 IGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILI 396
I TQPRRVAA S+AKRV+EE +V Y IRF+ PDT IK+MTDG+LLRE+
Sbjct: 451 IAITQPRRVAAVSIAKRVSEEL-TGFSSKVSYQIRFDSTINPDTAIKFMTDGILLRELSS 509
Query: 397 DENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPD----------LRLIVTSATLDA 446
D L+ YS +++DEAHER++NTD+L GLL ++V+ R + L+LI+ SATL
Sbjct: 510 DFLLTAYSAVIVDEAHERSVNTDILLGLLSRIVRLRREMSKSDQKVKPLKLIIMSATLRV 569
Query: 447 ERFSGYFFNCNIFSIP-------GRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGD 499
FS N +FS+P R +PV I+++R DYL A V IH P G
Sbjct: 570 TDFSE---NKLLFSVPPPIIKIDARQYPVSIHFNRTTKPDYLQDAFDKVCLIHKRLPAGS 626
Query: 500 ILLFLTGQEEIDFACESL 517
IL+FLTGQ+E++ C+ L
Sbjct: 627 ILVFLTGQQEVEQLCQML 644
Score = 470 (170.5 bits), Expect = 3.4e-89, Sum P(4) = 3.4e-89
Identities = 100/251 (39%), Positives = 148/251 (58%)
Query: 508 EEIDFACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAE 567
E+ID S + + P + VLP+YS L +E Q ++F+ +P G R +VATN+AE
Sbjct: 680 EDIDQVPTSSSSSVTYDDESEP-MYVLPLYSLLTTEDQMKVFDSSPEGHRMCIVATNVAE 738
Query: 568 ASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLY 627
S+TI I YV+D G AK+ VYN K + + IS+A+A QRAGRAGRTGPG CYRLY
Sbjct: 739 TSITIPNIRYVVDCGKAKERVYNEKTSVQKFEVRWISKANADQRAGRAGRTGPGHCYRLY 798
Query: 628 TESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYS 687
+ + + S ++PEI R + L MK M I+N+ +F F P L +++ L +
Sbjct: 799 SSAVFDSSFPLHSLPEILRTPVESIVLQMKNMNIDNIANFPFPTSPGRSRLEKSLKLLSN 858
Query: 688 LGALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRE 747
LGA+D EG+LTKLG++M+ FPL P SKML+ GC ++ +++ + +F +
Sbjct: 859 LGAIDSEGVLTKLGEQMSLFPLSPRFSKMLIIGQQHGCLPYVIALVSALSINQLFVSKQS 918
Query: 748 RQAKADEKRAR 758
A +K +R
Sbjct: 919 LLYDAHDKNSR 929
Score = 62 (26.9 bits), Expect = 4.2e-43, Sum P(3) = 4.2e-43
Identities = 44/209 (21%), Positives = 82/209 (39%)
Query: 185 SPVKVFKNPE-GSLSRTAALQSALTKERREVREQQLRTMI-----DSIP----KDLNRPW 234
S +V NPE + A + + KE R+ R+Q+L+ + SI K L++
Sbjct: 37 SSSEVHANPEPDNQDSNAEILIDVPKEERQKRKQELKDQLLKENEGSISSKKKKRLDKYI 96
Query: 235 EDPMPETGERHLAQELRGVGLSARDMPEWKKNAYGKAFTFGQRSKLSIQEQRRSLPIFKL 294
E+ + + L +L + + KN GK T ++ K S+ E++ LP+
Sbjct: 97 ENKLKKEEVASLIAKLAEERIDTSLLSS-SKNL-GKQATAKEKLKKSLLEEKLGLPLSDA 154
Query: 295 KNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCTQPR---RVAATSVA 351
+ L + V V ++ + +T +Y +G+ G + +
Sbjct: 155 DSRLYKVV---DVETTTTKSSTAETNAPEKYSTRSGFGFGFSTGTNESEITPNIKVLPPK 211
Query: 352 KRVAEEFGCRLGEEVGYAIRFEDCTGPDT 380
K+ +G L E+ Y ED D+
Sbjct: 212 KKKNASWGKMLNEDPEYDSAEEDYLSTDS 240
Score = 46 (21.3 bits), Expect = 3.4e-89, Sum P(4) = 3.4e-89
Identities = 10/43 (23%), Positives = 23/43 (53%)
Query: 756 RARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
R + P+ L+LL+ A+ + +C EN++ ++L++
Sbjct: 960 RFQAIDPDAPALSLLSAVCAYDYASDKRKFCKENYLREKALEE 1002
Score = 45 (20.9 bits), Expect = 2.5e-41, Sum P(3) = 2.5e-41
Identities = 15/57 (26%), Positives = 28/57 (49%)
Query: 391 LREILIDEN---LSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATL 444
L++ L+ EN +S LD+ E + + + L+ +L + R D L+ +S L
Sbjct: 72 LKDQLLKENEGSISSKKKKRLDKYIENKLKKEEVASLIAKLAEERIDTSLLSSSKNL 128
Score = 38 (18.4 bits), Expect = 3.4e-89, Sum P(4) = 3.4e-89
Identities = 29/143 (20%), Positives = 58/143 (40%)
Query: 3 LDNGIRELTYLSLLSKICSE-LETHLGFIDKVLAEFISESGRNSETVEIFDDKLKEYGAD 61
++N +++ SL++K+ E ++T L K L + + + + ++KL G
Sbjct: 96 IENKLKKEEVASLIAKLAEERIDTSLLSSSKNLGK--QATAKEKLKKSLLEEKL---GLP 150
Query: 62 LPNYLVRTLFNVIHTILHPKPKLQSKKKSGRDRKTNYKAEFENDRERSGRYCKSNPPMLK 121
L + R L+ V+ + S ++ K + ++ F +G P +K
Sbjct: 151 LSDADSR-LYKVVD--VETTTTKSSTAETNAPEKYSTRSGFGFGFS-TGTNESEITPNIK 206
Query: 122 DMPVSRMGGVSGVLASNEYPRYD 144
+P + S NE P YD
Sbjct: 207 VLPPKKKKNASWGKMLNEDPEYD 229
>UNIPROTKB|G4NGS5 [details] [associations]
symbol:MGG_04040 "DEAH box polypeptide 37" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
EMBL:CM001236 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14780
RefSeq:XP_003719802.1 ProteinModelPortal:G4NGS5
EnsemblFungi:MGG_04040T0 GeneID:2677154 KEGG:mgr:MGG_04040
Uniprot:G4NGS5
Length = 1185
Score = 508 (183.9 bits), Expect = 1.2e-87, Sum P(3) = 1.2e-87
Identities = 113/263 (42%), Positives = 164/263 (62%)
Query: 270 KAFTFGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEA 329
KAF IQ R +LP+ + +++A+H+N ++++ G TGSGKTTQ+ Q+L EA
Sbjct: 338 KAFHVAVTRSPEIQSARLALPVVSEEQRIMEAIHNNNIVVVCGATGSGKTTQIPQFLFEA 397
Query: 330 GY-----TTKGKIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKY 384
GY T G IG TQPRRVAA S++KRVAEE G ++VGY IRFE DT +K+
Sbjct: 398 GYGSPDSPTPGMIGITQPRRVAAVSMSKRVAEELGDH-SQKVGYQIRFEGTVNKDTAVKF 456
Query: 385 MTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPD---------- 434
MTDG+LLRE+ D L +YS I++DEAHER++NTD+L G+L +++K R +
Sbjct: 457 MTDGVLLREVAQDLALRKYSAIVVDEAHERSVNTDILIGMLSRIIKLRAEMAQEDPTVKP 516
Query: 435 LRLIVTSATLDAERFSGYFFNCNIFSIP-------GRTFPVDINYSRQEVTDYLDSALIT 487
L+L++ SATL E + N N+F+ P GR +PV ++++R+ DY++ A
Sbjct: 517 LKLVIMSATLRIEDLTE---NKNLFATPPPVLEVEGRQYPVTLHFARKTHHDYVEEAFRK 573
Query: 488 VLQIHVDEPEGDILLFLTGQEEI 510
+ + H P G +L+FLTGQ EI
Sbjct: 574 ISRGHKKLPPGGMLVFLTGQNEI 596
Score = 439 (159.6 bits), Expect = 1.2e-87, Sum P(3) = 1.2e-87
Identities = 92/218 (42%), Positives = 135/218 (61%)
Query: 533 VLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPK 592
VLP+YS LP++ Q R+FEP P G R VV+ATN+AE SLTI GI YV D G +K+ Y+
Sbjct: 677 VLPLYSLLPTKEQLRVFEPPPDGSRLVVLATNVAETSLTIPGIRYVFDSGRSKERKYDQL 736
Query: 593 QRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHT 652
+ S + IS+ASA QR GRAGRTGPG C+RLY+ + Y ++ +PE+ R +L
Sbjct: 737 TGVQSFEVGWISKASANQREGRAGRTGPGHCWRLYSSAVYERDLDEFALPELLRTSLEGV 796
Query: 653 TLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPP 712
L +K+M + ++++F F PP +L+ + + L + A+ EEG +T++G M+ FPL P
Sbjct: 797 VLQLKSMNLQHVVNFPFPTPPERDSLVKSEKLLKYISAVSEEGRVTQVGYTMSIFPLSPR 856
Query: 713 LSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQA 750
S++LL C +T++A + IF P E QA
Sbjct: 857 FSRILLLGHQHDCLHYTVTLVAALSAAEIFI-P-ENQA 892
Score = 50 (22.7 bits), Expect = 1.2e-87, Sum P(3) = 1.2e-87
Identities = 15/51 (29%), Positives = 23/51 (45%)
Query: 748 RQAKADEKRARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
RQ A K F + D + +L V + A + WC +FV + LK+
Sbjct: 921 RQFNAVNKNFCFLDDKSDAIKMLQVLGEF-AHEPTEKWCESHFVRFKVLKE 970
>UNIPROTKB|O83538 [details] [associations]
symbol:TP_0526 "ATP-dependent helicase (HrpA)"
species:243276 "Treponema pallidum subsp. pallidum str. Nichols"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AE000520
GenomeReviews:AE000520_GR PIR:H71312 RefSeq:NP_218966.1
ProteinModelPortal:O83538 IntAct:O83538 GeneID:2610764
KEGG:tpa:TP0526 PATRIC:20531093 OMA:WEYRERF ProtClustDB:CLSK507866
Uniprot:O83538
Length = 668
Score = 869 (311.0 bits), Expect = 6.0e-87, P = 6.0e-87
Identities = 195/520 (37%), Positives = 298/520 (57%)
Query: 287 RSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCTQPRRVA 346
+ LP++ K++++ A+ + V+++ TGSGKTTQL L EAGY G IG TQPRR+A
Sbjct: 5 KQLPVYSQKDKILSALAHHHVIVVESPTGSGKTTQLPLILHEAGYNEGGAIGVTQPRRIA 64
Query: 347 ATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVI 406
SV++ +A++ VGY +RFED T +T IK MTDG+LL+E+ +D LS+YS+I
Sbjct: 65 VLSVSEFIAKQVLHVQPGIVGYKMRFEDHTDVETKIKVMTDGILLQEMKLDPLLSKYSII 124
Query: 407 MLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTF 466
M+DEAHER++N D + GLLK+++++R D R++++SAT++ FS YF C + I +
Sbjct: 125 MVDEAHERSLNIDFILGLLKRVLQQRHDFRIVISSATINTAMFSRYFNECPVIKIDAVAY 184
Query: 467 PVDINYSRQEV-----TDYLDSALIT-----VLQIHVDEPEGDILLFLTGQEEIDFACES 516
PV + + + T ++AL+ V ++ +G IL+FL G+ I
Sbjct: 185 PVTVIFDPPDTPASTHTKEAEAALLEKIVCIVERVIASRDKGAILIFLPGERSIKNCITR 244
Query: 517 LCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIF 576
L + + +L +LP+Y L E Q ++F AP G RKVV+ATNIAE S+TID +
Sbjct: 245 LSHE-----RWFRKLFLLPLYGRLSKEEQEQVFNRAPFGKRKVVIATNIAETSITIDDVT 299
Query: 577 YVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEM 636
VID G K N YNP SL TPISQAS QR GRAGR G CYRLY+ + +
Sbjct: 300 TVIDSGLVKLNSYNPLSYTASLDETPISQASCNQRRGRAGRVRAGTCYRLYSRDDFE-QR 358
Query: 637 SPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGL 696
P T+ EI R +L + M +GI++ FDF+ PP +I A + L LGAL+++
Sbjct: 359 EPYTLEEIYRTDLSEVVMRMAELGIHDFEHFDFISPPGTHGIIGAEDTLRLLGALEDDRS 418
Query: 697 LTKLGKKMAEFPLDPPLSKMLLASVDL--GCSDEILTIIAMIQTGHIFTRPRERQAKADE 754
L+++GK M FPL P S+M++ ++ D++L A + +++ K +
Sbjct: 419 LSEIGKMMCLFPLGPRQSRMIVEALRRYPHSIDDVLIAAAFLSARSPLIFSEDQEEKTKK 478
Query: 755 KRARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSR 794
F P GD ++ L +Y A+ +N +C +++ R
Sbjct: 479 AHGTFSDPMGDFVSFLRIYRAYAQENNKHSFCQHFYLDER 518
>UNIPROTKB|J3KR71 [details] [associations]
symbol:DHX34 "Probable ATP-dependent RNA helicase DHX34"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AC008754 HGNC:HGNC:16719
ChiTaRS:DHX34 ProteinModelPortal:J3KR71 Ensembl:ENST00000466298
Uniprot:J3KR71
Length = 576
Score = 450 (163.5 bits), Expect = 7.7e-86, Sum P(3) = 7.7e-86
Identities = 105/282 (37%), Positives = 165/282 (58%)
Query: 199 RTAALQSALTKERREVREQQLRTMIDSIPKDLNRPWEDPMPETGERHLAQELRG---VG- 254
R Q+ T + E Q + I ++ DL R + DP L RG +G
Sbjct: 66 RLQRFQNLKTSRKEEKDPGQPKHSIPALA-DLPRTY-DPRYRINLSVLGPATRGSQGLGR 123
Query: 255 -LSARDMPEWKKNA-----YGKAFTFGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVL 308
L A + E+++ +G+ FG+ +KL Q +R +LPI + N ++Q + ++QV+
Sbjct: 124 HLPAERVAEFRRALLHYLDFGQKQAFGRLAKL--QRERAALPIAQYGNRILQTLKEHQVV 181
Query: 309 ILIGETGSGKTTQLAQYLAEAGYTTKGKIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGY 368
++ G+TG GK+TQ+ QYL AG++ + CTQPRR+A S+AKRV E + G +VGY
Sbjct: 182 VVAGDTGCGKSTQVPQYLLAAGFS---HVACTQPRRIACISLAKRVGFESLSQYGSQVGY 238
Query: 369 AIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQL 428
IRFE T I ++T G+LLR+I + +L QY V+++DE HER ++ D L G+L++L
Sbjct: 239 QIRFESTRSAATKIVFLTVGLLLRQIQREPSLPQYEVLIVDEVHERHLHNDFLLGVLQRL 298
Query: 429 VKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPVDI 470
+ RPDL++I+ SAT++ FS YF N + +PGR FP+ +
Sbjct: 299 LPTRPDLKVILMSATINISLFSSYFSNAPVVQVPGRLFPITV 340
Score = 417 (151.9 bits), Expect = 7.7e-86, Sum P(3) = 7.7e-86
Identities = 88/197 (44%), Positives = 124/197 (62%)
Query: 548 IFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQAS 607
+F+ APPG RK +++TNIAE S+TIDGI +V+D G K+ Y+P+ +L L ISQAS
Sbjct: 340 VFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQAS 399
Query: 608 ALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSF 667
A QR GRAGRTGPG C+RLY ES Y + +P +PEI+R+ L L MK+M + + +F
Sbjct: 400 AEQRKGRAGRTGPGVCFRLYAESDYDA-FAPYPVPEIRRVALDSLVLQMKSMSVGDPRTF 458
Query: 668 DFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSD 727
F++PP P +L +A+ L GALD LT +G +A+ P+D + KML+ +
Sbjct: 459 PFIEPPPPASLETAILYLRDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLVE 518
Query: 728 EILTIIAMIQTGHIFTR 744
+LTI A + FTR
Sbjct: 519 PVLTIAAALSVQSPFTR 535
Score = 44 (20.5 bits), Expect = 7.7e-86, Sum P(3) = 7.7e-86
Identities = 10/37 (27%), Positives = 20/37 (54%)
Query: 87 KKKSGRDRKTNYKAEFENDR-ERSGRYCKSNPPMLKD 122
+ + GRDR+ +++A E + E+ C +L+D
Sbjct: 5 RTREGRDRRDHHRAPSEEEALEKWDWNCPETRRLLED 41
>DICTYBASE|DDB_G0287351 [details] [associations]
symbol:dhx37 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0005732 "small nucleolar ribonucleoprotein
complex" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0287351
GO:GO:0005524 GO:GO:0005730 GenomeReviews:CM000154_GR GO:GO:0003676
GO:GO:0042254 EMBL:AAFI02000100 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0003724 KO:K14780 GO:GO:0005732
RefSeq:XP_637255.1 STRING:Q54KG8 EnsemblProtists:DDB0235265
GeneID:8626085 KEGG:ddi:DDB_G0287351 InParanoid:Q54KG8 OMA:HERNLNT
Uniprot:Q54KG8
Length = 1461
Score = 436 (158.5 bits), Expect = 4.8e-85, Sum P(5) = 4.8e-85
Identities = 98/231 (42%), Positives = 132/231 (57%)
Query: 526 KDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAK 585
K L VLP+YS LP+ Q R+F+ P G R VVVATN+AE SLTI I YV+D G K
Sbjct: 841 KPAGPLFVLPLYSTLPTSKQMRVFQTPPLGSRLVVVATNLAETSLTIPNIKYVVDTGRVK 900
Query: 586 QNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQ 645
Q YN + S + S+ASA QRAGRAGRTGPG CYR+Y+ + + + PEI
Sbjct: 901 QRYYNKDNGISSFEVGWTSKASADQRAGRAGRTGPGHCYRIYSSAVFNDHFQQFSKPEIL 960
Query: 646 RINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGL-LTKLGKKM 704
I + L MK+MGI + F F PP +L A+ L +LGAL+ + +T+LG KM
Sbjct: 961 MIPIDGMILQMKSMGIQKITGFPFPTPPDESSLKLALRTLINLGALEVKTFSITELGMKM 1020
Query: 705 AEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPR-ERQAKADE 754
++FP+ P SKMLL + C I+ I++++ F + E DE
Sbjct: 1021 SQFPVSPRHSKMLLLGQEHNCLPYIIAIVSILTVKDPFLKEAYEANQNNDE 1071
Score = 382 (139.5 bits), Expect = 4.8e-85, Sum P(5) = 4.8e-85
Identities = 83/166 (50%), Positives = 110/166 (66%)
Query: 279 KLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTK---- 334
K I R +LPI ++ +++ + DN V+I+ GETGSGKTTQ+ Q+L E+G+ +
Sbjct: 395 KPEIDAVRDNLPIMLEEHSIVEKIKDNDVVIICGETGSGKTTQVPQFLYESGFGHRESGD 454
Query: 335 --GKIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDT-VIKYMTDGMLL 391
G IG TQPRRVAA S AKRVAEE G+EVGY IR++ IK+MTDG+L+
Sbjct: 455 FPGIIGVTQPRRVAAVSTAKRVAEELNVEFGKEVGYQIRYDKKLDSSVNKIKFMTDGILM 514
Query: 392 REILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRL 437
RE+ D LSQYS I++DEAHER +NTD+L GLL ++V R L L
Sbjct: 515 REVQTDFLLSQYSSILIDEAHERNLNTDILIGLLSRIVPLRKKLYL 560
Score = 157 (60.3 bits), Expect = 4.8e-85, Sum P(5) = 4.8e-85
Identities = 38/99 (38%), Positives = 62/99 (62%)
Query: 435 LRLIVTSATLDAERFSGY--FFNCN--IFSIPGRTFPVDINYSRQ-EVTDYLDSALITVL 489
L+L+V SATL E F+ F+ + +IP R FPV I+++++ E+ +Y+D V+
Sbjct: 580 LKLVVMSATLRVEDFTKNKTLFSRPPPVINIPTRQFPVTIHFNKKTELVNYIDECYKKVV 639
Query: 490 QIHVDEPEGDILLFLTGQEEIDFACESLCEK--IKALGK 526
+IH + P G IL+F+TG++EI++ C L IKA+ K
Sbjct: 640 KIHKNLPSGGILVFVTGKQEIEYLCSKLRRAFPIKAINK 678
Score = 49 (22.3 bits), Expect = 4.8e-85, Sum P(5) = 4.8e-85
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 200 TAALQSALTKERREVREQQLRTMI-DSIPKDLNR 232
T AL+ AL K+++ RE++L+ I I K R
Sbjct: 3 TDALKRALAKKKKLTREERLKATIRKKIDKHAER 36
Score = 49 (22.3 bits), Expect = 4.8e-85, Sum P(5) = 4.8e-85
Identities = 16/60 (26%), Positives = 29/60 (48%)
Query: 747 ERQAKADEKR---ARFFQPEGDHLTLLAVYEAWKAKNFSLP-----WCGENFVNSRSLKK 798
ERQ R ++ E D L++L V A+ + P +C +NF+N++S+ +
Sbjct: 1098 ERQKHLQRLRNSMRKWLHKESDLLSILKVVGAYDYQIRKSPKDIDHFCSQNFLNTKSMSE 1157
Score = 47 (21.6 bits), Expect = 7.7e-85, Sum P(5) = 7.7e-85
Identities = 15/56 (26%), Positives = 27/56 (48%)
Query: 63 PNYLVRTLFNVIHTILHPKPKLQSKKK----SGRDRKTNYKAEFENDRERSGRYCK 114
P L R F+ H + + + +SKKK +D + +Y+ E+ + + G Y K
Sbjct: 134 PETLDRIEFDKQHKAIEKRREEKSKKKFFFWKDQDVERDYQ-EYNDSHQDKGSYLK 188
>TAIR|locus:2007003 [details] [associations]
symbol:FAS4 "FASCIATED STEM 4" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
EMBL:CP002684 GO:GO:0005524 GO:GO:0003676 EMBL:AC051630
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000201240 KO:K14780
IPI:IPI00531863 PIR:E86457 RefSeq:NP_174605.1 UniGene:At.39951
ProteinModelPortal:Q9C813 SMR:Q9C813 STRING:Q9C813 PRIDE:Q9C813
EnsemblPlants:AT1G33390.1 GeneID:840232 KEGG:ath:AT1G33390
TAIR:At1g33390 InParanoid:Q9C813 OMA:EVQWISK PhylomeDB:Q9C813
ProtClustDB:CLSN2693169 Genevestigator:Q9C813 Uniprot:Q9C813
Length = 1237
Score = 413 (150.4 bits), Expect = 1.2e-84, Sum P(3) = 1.2e-84
Identities = 93/206 (45%), Positives = 126/206 (61%)
Query: 519 EKIKALGKDVP-ELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFY 577
E++K K P +L VLP+Y+ L Q R+FE R VVVATN+AE SLTI GI Y
Sbjct: 636 EQVK--NKFSPGKLRVLPLYAMLSPAAQLRVFEEVEKEERLVVVATNVAETSLTIPGIKY 693
Query: 578 VIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMS 637
V+D G K Y+ K ++S + ISQASA QRAGRAGRTGPG CYRLY+ + + +
Sbjct: 694 VVDTGRVKVKNYDSKTGMESYEVDWISQASASQRAGRAGRTGPGHCYRLYSSAVFSNIFE 753
Query: 638 PTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLL 697
+++PEI ++ + L MK+M I + +F F PP P A+ A L +L ALD G L
Sbjct: 754 ESSLPEIMKVPVDGVILLMKSMNIPKVENFPFPTPPEPSAIREAERCLKALEALDSNGGL 813
Query: 698 TKLGKKMAEFPLDPPLSKMLLASVDL 723
T LGK M+ +P+ P S+MLL + +
Sbjct: 814 TPLGKAMSHYPMSPRHSRMLLTVIQM 839
Score = 397 (144.8 bits), Expect = 1.2e-84, Sum P(3) = 1.2e-84
Identities = 81/170 (47%), Positives = 119/170 (70%)
Query: 271 AFTFGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAG 330
AF ++E R+ LPI ++ E+++A++ + +I+ G+TG GKTTQ+ Q+L EAG
Sbjct: 223 AFVVHVSRPAEVEETRKDLPIVMMEQEIMEAINRHPAVIISGQTGCGKTTQVPQFLYEAG 282
Query: 331 YTTK------GKIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKY 384
+ +K G IG TQPRRVA + AKRVA E G RLG+EVG+ +R++ G ++ IK+
Sbjct: 283 FGSKQFSSRSGIIGITQPRRVAVLATAKRVAFELGVRLGKEVGFQVRYDKKIGENSSIKF 342
Query: 385 MTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPD 434
MTDG+LLREI D L +YSVI+LDEAHER++NTD+L G+L +++K R +
Sbjct: 343 MTDGILLREIQNDFLLRRYSVIILDEAHERSLNTDILIGMLTRVIKIRQE 392
Score = 173 (66.0 bits), Expect = 1.2e-84, Sum P(3) = 1.2e-84
Identities = 41/95 (43%), Positives = 58/95 (61%)
Query: 435 LRLIVTSATLDAERF-SGYFFNCNI---FSIPGRTFPVDINYSRQ-EVTDYLDSALITVL 489
L+LI+ SATL E F SG NI +P R +PV I++S++ E+ DY+ A V+
Sbjct: 416 LKLILMSATLRVEDFVSGKRLFPNIPPLIEVPTRQYPVTIHFSKKTEIVDYIGEAYKKVM 475
Query: 490 QIHVDEPEGDILLFLTGQEEIDFACESLCEKIKAL 524
IH P+G IL+F+TGQ E+D+ CE L + K L
Sbjct: 476 SIHKKLPQGGILVFVTGQREVDYLCEKLRKSSKEL 510
>GENEDB_PFALCIPARUM|PF08_0042 [details] [associations]
symbol:PF08_0042 "ATP-dependent RNA helicase
prh1, putative" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509
EMBL:AL844507 RefSeq:XP_001349312.1 ProteinModelPortal:Q8IB47
EnsemblProtists:PF08_0042:mRNA GeneID:2655493 KEGG:pfa:PF08_0042
EuPathDB:PlasmoDB:PF3D7_0821300 ProtClustDB:CLSZ2515096
Uniprot:Q8IB47
Length = 867
Score = 464 (168.4 bits), Expect = 2.0e-84, Sum P(5) = 2.0e-84
Identities = 95/223 (42%), Positives = 141/223 (63%)
Query: 520 KIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVI 579
K + + + + +L +YS+LP++ Q IFEP PP RKV+++TNIAE S+TI I YVI
Sbjct: 389 KTEIMPDKIYNMKILQLYSSLPNKKQKVIFEPVPPNTRKVILSTNIAETSVTIPNIKYVI 448
Query: 580 DPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPT 639
D G K ++ + + L +T IS+ SA+QR+GRAGR PG+ YR+YT+ Y + M+P
Sbjct: 449 DSGKVKIKYFDVNRGSNVLRVTQISKDSAIQRSGRAGREAPGQVYRIYTKEEYEN-MNPF 507
Query: 640 TIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLTK 699
IPEI R +L L +KAM INN L F+F + P + + + + L+ + A+D LT
Sbjct: 508 LIPEIFRSDLTQIYLELKAMNINNPLEFNFPENPRKELFVHSAKMLFKINAIDMNNNLTD 567
Query: 700 LGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIF 742
LGKK+ FPL+P + +LL S++ C DEI TI+A++ IF
Sbjct: 568 LGKKLCLFPLNPIYANILLCSIEFNCIDEIATIVALLNCDSIF 610
Score = 325 (119.5 bits), Expect = 2.0e-84, Sum P(5) = 2.0e-84
Identities = 69/160 (43%), Positives = 104/160 (65%)
Query: 334 KGKIGCTQPRRVAATSVAKRVAEEFGCR-LGEEVGYAIRFEDCTGPDTVIKYMTDGMLLR 392
K K+ + PRRVA +VA+RV++E +G VGY IRF++ T IK++TDG+L+R
Sbjct: 69 KKKMLISLPRRVATITVAERVSKEMKRGDIGNYVGYTIRFKNVCSDKTRIKFVTDGILIR 128
Query: 393 EILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGY 452
EI+ D L +Y ++LDE HER+I TDVL G K L+++R +++I+ SAT D F+ +
Sbjct: 129 EIMNDPLLKKYKFLILDEIHERSIRTDVLLGYTKILLQKRKKIKIILMSATFDINIFNQF 188
Query: 453 FFNCNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIH 492
F N I +IP + + I Y R+ + DY+ S + T+LQIH
Sbjct: 189 FNNPPIITIPHKLHKITIYYPRRNIEDYILSVVSTILQIH 228
Score = 108 (43.1 bits), Expect = 2.0e-84, Sum P(5) = 2.0e-84
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 287 RSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGK 336
R LPI K K+E+ + + N ++I+ GETG GKTTQ+ Q + E + K K
Sbjct: 2 RELPILKYKHEIKKLIKKNNLIIIKGETGCGKTTQVPQIINEIFFDKKEK 51
Score = 74 (31.1 bits), Expect = 2.0e-84, Sum P(5) = 2.0e-84
Identities = 17/33 (51%), Positives = 22/33 (66%)
Query: 494 DEPEGDILLFLTGQEEIDFACESLCEKIKALGK 526
D+ GDIL+FL GQEEI+ L EK+K + K
Sbjct: 313 DKSLGDILVFLPGQEEIEMVNIMLKEKLKIIYK 345
Score = 65 (27.9 bits), Expect = 2.0e-84, Sum P(5) = 2.0e-84
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 756 RARFFQPEGDHLTLLAVYEAWK 777
R + P+GDHLTLL ++ W+
Sbjct: 705 RRKLIHPDGDHLTLLHIFYLWQ 726
Score = 42 (19.8 bits), Expect = 2.5e-47, Sum P(4) = 2.5e-47
Identities = 7/10 (70%), Positives = 9/10 (90%)
Query: 96 TNYKAEFEND 105
T+Y +EFEND
Sbjct: 232 TSYSSEFEND 241
>UNIPROTKB|Q8IB47 [details] [associations]
symbol:PF08_0042 "ATP-dependent RNA helicase prh1,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509
EMBL:AL844507 RefSeq:XP_001349312.1 ProteinModelPortal:Q8IB47
EnsemblProtists:PF08_0042:mRNA GeneID:2655493 KEGG:pfa:PF08_0042
EuPathDB:PlasmoDB:PF3D7_0821300 ProtClustDB:CLSZ2515096
Uniprot:Q8IB47
Length = 867
Score = 464 (168.4 bits), Expect = 2.0e-84, Sum P(5) = 2.0e-84
Identities = 95/223 (42%), Positives = 141/223 (63%)
Query: 520 KIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVI 579
K + + + + +L +YS+LP++ Q IFEP PP RKV+++TNIAE S+TI I YVI
Sbjct: 389 KTEIMPDKIYNMKILQLYSSLPNKKQKVIFEPVPPNTRKVILSTNIAETSVTIPNIKYVI 448
Query: 580 DPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPT 639
D G K ++ + + L +T IS+ SA+QR+GRAGR PG+ YR+YT+ Y + M+P
Sbjct: 449 DSGKVKIKYFDVNRGSNVLRVTQISKDSAIQRSGRAGREAPGQVYRIYTKEEYEN-MNPF 507
Query: 640 TIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLTK 699
IPEI R +L L +KAM INN L F+F + P + + + + L+ + A+D LT
Sbjct: 508 LIPEIFRSDLTQIYLELKAMNINNPLEFNFPENPRKELFVHSAKMLFKINAIDMNNNLTD 567
Query: 700 LGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIF 742
LGKK+ FPL+P + +LL S++ C DEI TI+A++ IF
Sbjct: 568 LGKKLCLFPLNPIYANILLCSIEFNCIDEIATIVALLNCDSIF 610
Score = 325 (119.5 bits), Expect = 2.0e-84, Sum P(5) = 2.0e-84
Identities = 69/160 (43%), Positives = 104/160 (65%)
Query: 334 KGKIGCTQPRRVAATSVAKRVAEEFGCR-LGEEVGYAIRFEDCTGPDTVIKYMTDGMLLR 392
K K+ + PRRVA +VA+RV++E +G VGY IRF++ T IK++TDG+L+R
Sbjct: 69 KKKMLISLPRRVATITVAERVSKEMKRGDIGNYVGYTIRFKNVCSDKTRIKFVTDGILIR 128
Query: 393 EILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGY 452
EI+ D L +Y ++LDE HER+I TDVL G K L+++R +++I+ SAT D F+ +
Sbjct: 129 EIMNDPLLKKYKFLILDEIHERSIRTDVLLGYTKILLQKRKKIKIILMSATFDINIFNQF 188
Query: 453 FFNCNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIH 492
F N I +IP + + I Y R+ + DY+ S + T+LQIH
Sbjct: 189 FNNPPIITIPHKLHKITIYYPRRNIEDYILSVVSTILQIH 228
Score = 108 (43.1 bits), Expect = 2.0e-84, Sum P(5) = 2.0e-84
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 287 RSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGK 336
R LPI K K+E+ + + N ++I+ GETG GKTTQ+ Q + E + K K
Sbjct: 2 RELPILKYKHEIKKLIKKNNLIIIKGETGCGKTTQVPQIINEIFFDKKEK 51
Score = 74 (31.1 bits), Expect = 2.0e-84, Sum P(5) = 2.0e-84
Identities = 17/33 (51%), Positives = 22/33 (66%)
Query: 494 DEPEGDILLFLTGQEEIDFACESLCEKIKALGK 526
D+ GDIL+FL GQEEI+ L EK+K + K
Sbjct: 313 DKSLGDILVFLPGQEEIEMVNIMLKEKLKIIYK 345
Score = 65 (27.9 bits), Expect = 2.0e-84, Sum P(5) = 2.0e-84
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 756 RARFFQPEGDHLTLLAVYEAWK 777
R + P+GDHLTLL ++ W+
Sbjct: 705 RRKLIHPDGDHLTLLHIFYLWQ 726
Score = 42 (19.8 bits), Expect = 2.5e-47, Sum P(4) = 2.5e-47
Identities = 7/10 (70%), Positives = 9/10 (90%)
Query: 96 TNYKAEFEND 105
T+Y +EFEND
Sbjct: 232 TSYSSEFEND 241
>UNIPROTKB|Q7L7V1 [details] [associations]
symbol:DHX32 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX32" species:9606 "Homo sapiens"
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR007502
Pfam:PF04408 PROSITE:PS51194 SMART:SM00847 GO:GO:0005739
GO:GO:0005524 GO:GO:0005634 EMBL:CH471066 GO:GO:0004386
InterPro:IPR014001 PROSITE:PS51192 EMBL:AY064247 EMBL:AL360176
UniGene:Hs.370292 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
HOVERGEN:HBG039428 EMBL:AF427340 EMBL:AF427341 EMBL:AY064250
EMBL:AK001556 EMBL:AK001751 EMBL:AK024869 EMBL:BC002473
EMBL:BC037925 EMBL:BC068471 EMBL:AL162051 IPI:IPI00334601
IPI:IPI00644447 PIR:T47184 RefSeq:NP_060650.2
ProteinModelPortal:Q7L7V1 SMR:Q7L7V1 IntAct:Q7L7V1 STRING:Q7L7V1
PhosphoSite:Q7L7V1 DMDM:74759011 PRIDE:Q7L7V1 DNASU:55760
Ensembl:ENST00000284688 Ensembl:ENST00000284690
Ensembl:ENST00000368721 Ensembl:ENST00000415732 GeneID:55760
KEGG:hsa:55760 UCSC:uc001lje.1 UCSC:uc001ljf.1 CTD:55760
GeneCards:GC10M127515 HGNC:HGNC:16717 HPA:HPA048872 MIM:607960
neXtProt:NX_Q7L7V1 PharmGKB:PA27219 InParanoid:Q7L7V1 OMA:LACEQDI
OrthoDB:EOG4N30NF PhylomeDB:Q7L7V1 ChiTaRS:DHX32 GenomeRNAi:55760
NextBio:60779 Bgee:Q7L7V1 Genevestigator:Q7L7V1 Uniprot:Q7L7V1
Length = 743
Score = 836 (299.3 bits), Expect = 1.9e-83, P = 1.9e-83
Identities = 193/532 (36%), Positives = 305/532 (57%)
Query: 284 EQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAE---AGYTTKGKIGCT 340
++R LPI+K K ++ + NQ++I+ G+ GK+ Q+ Q+ AE + + G + CT
Sbjct: 57 KEREDLPIWKEKYSFMENLLQNQIVIVSGDAKCGKSAQVPQWCAEYCLSIHYQHGGVICT 116
Query: 341 QPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENL 400
Q + +A RVA+E +G EVGY I FE+C +T+++Y TD ML RE++ + L
Sbjct: 117 QVHKQTVVQLALRVADEMDVNIGHEVGYVIPFENCCTNETILRYCTDDMLQREMMSNPFL 176
Query: 401 SQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFS 460
Y VI+LD+ HER+I TDVL GLLK ++ RP+L+LI+ S+ + + Y+ N +
Sbjct: 177 GSYGVIILDDIHERSIATDVLLGLLKDVLLARPELKLIINSSPHLISKLNSYYGNVPVIE 236
Query: 461 IPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEK 520
+ + PV++ Y + D +S L + +IH +GDI++FL +++I+ CE++ +
Sbjct: 237 VKNK-HPVEVVYLSEAQKDSFESILRLIFEIHHSGEKGDIVVFLACEQDIEKVCETVYQG 295
Query: 521 IKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGG-------RKVVVATNIAEASLTID 573
L D+ ELVV+P+Y P E + +F+P R+VV+ T+ E + +
Sbjct: 296 SN-LNPDLGELVVVPLY---PKE-KCSLFKPLDETEKRCQVYQRRVVLTTSSGEFLIWSN 350
Query: 574 GIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYR 633
+ +VID G ++ VYNP+ R +SLV+ PISQ+ A R G + GK + LYTE
Sbjct: 351 SVRFVIDVGVERRKVYNPRIRANSLVMQPISQSQAEIRKQILGSSSSGKFFCLYTEEFAS 410
Query: 634 SEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDE 693
+M+P E+Q NL L MK + I L DF++ P+P++L+ A+E L L ALD
Sbjct: 411 KDMTPLKPAEMQEANLTSMVLFMKRIDIAGLGHCDFMNRPAPESLMQALEDLDYLAALDN 470
Query: 694 EGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTR-PRERQAKA 752
+G L++ G M+EFPLDP LSK +LAS + C DE+LTI AM+ + F+ P + A
Sbjct: 471 DGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVDEVLTIAAMVTAPNCFSHVPHGAEEAA 530
Query: 753 DEKRARFFQPEGDHLTLLAVYEAWK--AKNFSLP-----WCGENFVNSRSLK 797
F PEGDH TL+++Y+A++ N S WC + F+N +L+
Sbjct: 531 LTCWKTFLHPEGDHFTLISIYKAYQDTTLNSSSEYCVEKWCRDYFLNCSALR 582
>MGI|MGI:2141813 [details] [associations]
symbol:Dhx32 "DEAH (Asp-Glu-Ala-His) box polypeptide 32"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194 SMART:SM00847
MGI:MGI:2141813 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0004386 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 CTD:55760 OMA:LACEQDI OrthoDB:EOG4N30NF
ChiTaRS:DHX32 EMBL:AY065980 EMBL:AK033624 EMBL:AK169005
EMBL:AK172504 EMBL:BC006911 EMBL:BC022920 IPI:IPI00127679
IPI:IPI00830523 RefSeq:NP_598702.1 UniGene:Mm.199223
ProteinModelPortal:Q8BZS9 SMR:Q8BZS9 PaxDb:Q8BZS9 PRIDE:Q8BZS9
Ensembl:ENSMUST00000033290 Ensembl:ENSMUST00000063669 GeneID:101437
KEGG:mmu:101437 UCSC:uc009kdj.1 InParanoid:Q8BZS9 NextBio:354922
Bgee:Q8BZS9 CleanEx:MM_DHX32 Genevestigator:Q8BZS9 Uniprot:Q8BZS9
Length = 744
Score = 832 (297.9 bits), Expect = 5.0e-83, P = 5.0e-83
Identities = 191/532 (35%), Positives = 302/532 (56%)
Query: 284 EQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAE---AGYTTKGKIGCT 340
++R LPI+K K ++++ NQV+++ G++ GK++Q+ Q+ AE + + G + CT
Sbjct: 57 KEREELPIWKEKYSFMESLLQNQVVVVSGDSKCGKSSQVPQWCAEYCLSIHYQHGGVICT 116
Query: 341 QPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENL 400
Q + A +A RVA+E +G EVGY I FE+C +T+++Y TD ML RE++ + L
Sbjct: 117 QAHKQTAVQLALRVADEMDVNIGHEVGYVIPFENCCTTETILRYCTDDMLQREMMSNPFL 176
Query: 401 SQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFS 460
Y VI+LD+ HER++ TDVL GLLK ++ RP+L+LIV + L + S Y+ + +
Sbjct: 177 GSYGVIILDDVHERSLATDVLLGLLKDVLLARPELKLIVNCSPLLTSKLSSYYGDVPVIE 236
Query: 461 IPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEK 520
+ + PV++ Y D +S + + +IH +GD+++FL +++I+ E +C++
Sbjct: 237 VRNK-HPVEVVYLSGAQKDSFESVIRLIFEIHRSGEKGDVVVFLACEQDIEKTYELVCQE 295
Query: 521 IKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGG-------RKVVVATNIAEASLTID 573
L DV +LVV+P+Y P E + +F P R+VV+ T+ E+ +
Sbjct: 296 GSNLNPDVGDLVVIPLY---PKE-KCSLFRPVDETEKRCQVYQRRVVLTTSCGESLIWSH 351
Query: 574 GIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYR 633
+ +VID G ++ VYNP+ R +SLV+ PISQ+ A R G + GK + LYTE
Sbjct: 352 TVKFVIDVGLERRQVYNPRIRANSLVLQPISQSQAEIRKQLLGSSPSGKLFCLYTEEFAS 411
Query: 634 SEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDE 693
+M P E+Q NL L MK + I L DF++ P+P++L+ A+E L L ALD
Sbjct: 412 KDMRPLKPAEMQEANLTSMVLFMKRVDIAGLGRCDFMNRPAPESLMQALEDLDYLAALDN 471
Query: 694 EGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTR-PRERQAKA 752
+G L++ G M+EFPLDP LSK +LAS + C DE+LTI AM+ F P + A
Sbjct: 472 DGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVDEMLTIAAMVTAPSCFLHVPHGAEEAA 531
Query: 753 DEKRARFFQPEGDHLTLLAVYEAWK------AKNFSLP-WCGENFVNSRSLK 797
F PEGDH TL+ VY A++ A + WC + F++ +L+
Sbjct: 532 VTCWKTFLHPEGDHFTLINVYNAYQDTVLNSANEHCVEMWCHDCFLSCSALR 583
>RGD|1311740 [details] [associations]
symbol:Dhx32 "DEAH (Asp-Glu-Ala-His) box polypeptide 32"
species:10116 "Rattus norvegicus" [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR007502 Pfam:PF04408 SMART:SM00847
RGD:1311740 GO:GO:0004386 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 CTD:55760 OMA:LACEQDI
OrthoDB:EOG4N30NF EMBL:CH473953 IPI:IPI00366073
RefSeq:NP_001123511.1 UniGene:Rn.162500 Ensembl:ENSRNOT00000024655
GeneID:361667 KEGG:rno:361667 UCSC:RGD:1311740 NextBio:677165
Uniprot:D3ZGJ0
Length = 751
Score = 832 (297.9 bits), Expect = 5.0e-83, P = 5.0e-83
Identities = 191/532 (35%), Positives = 300/532 (56%)
Query: 284 EQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAE---AGYTTKGKIGCT 340
++R LPI+K K ++++ NQV+++ G++ GK++Q+ Q+ AE + + G + CT
Sbjct: 64 KEREELPIWKEKYSFMESLLQNQVVLVSGDSKCGKSSQVPQWCAEYCLSIHYQHGGVICT 123
Query: 341 QPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENL 400
Q + A +A RVA+E +G EVGY I FE+C +T+++Y TD ML RE++ + L
Sbjct: 124 QVHKQTAVQLALRVADEMDVNIGHEVGYVIPFENCCTTETILRYCTDDMLQREMMSNPFL 183
Query: 401 SQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFS 460
Y VI+LD+ HER++ TDVL GLLK ++ RP+L+LI+ + R S Y+ N +
Sbjct: 184 GSYGVIILDDVHERSLATDVLLGLLKDVLLARPELKLIINCSPFLISRLSSYYGNVPLLE 243
Query: 461 IPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEK 520
+ + PV++ Y D +S + + +IH +GD+++FL +++I+ E +C++
Sbjct: 244 VRNK-HPVEVVYLSGAQKDPFESVVRLIFEIHRSGEQGDVVVFLACEQDIEKTYEIVCQE 302
Query: 521 IKALGKDVPELVVLPVYSALPSEIQSRIFEPAPP-------GGRKVVVATNIAEASLTID 573
L DV ELVV+P+Y P E + +F P R+VV+ T+ E+ +
Sbjct: 303 GSNLNPDVGELVVIPLY---PKE-KCSLFRPVDETEKRCQASQRRVVLTTSCGESLIWSH 358
Query: 574 GIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYR 633
+ +VID G ++ VYNP+ R +SLV+ PISQ+ A R G + GK + LYTE
Sbjct: 359 TVRFVIDVGLERRQVYNPRIRANSLVLQPISQSQAEIRKQLLGSSPSGKLFCLYTEEFAS 418
Query: 634 SEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDE 693
+M P E+Q NL L MK + I L DF++ P+P++L+ A+E L L ALD
Sbjct: 419 KDMRPLKPAEMQEANLTSMVLFMKRVDIAGLGRCDFMNRPAPESLMQALEDLDYLAALDN 478
Query: 694 EGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTR-PRERQAKA 752
+G L++ G M+EFPLDP LSK +LAS + C DE+LTI AM+ F P + A
Sbjct: 479 DGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVDEMLTIAAMVTAPSCFLHVPHGAEEAA 538
Query: 753 DEKRARFFQPEGDHLTLLAVYEAWK------AKNFSLP-WCGENFVNSRSLK 797
F PEGDH TL+ +Y A++ A + WC F++ +L+
Sbjct: 539 VTCWKTFLHPEGDHFTLINIYNAYQDTVLNSANEHCVETWCHNCFLSCSALR 590
>TAIR|locus:2008144 [details] [associations]
symbol:AT1G48650 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
EMBL:CP002684 GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14442
IPI:IPI00938568 RefSeq:NP_001154411.1 UniGene:At.22775
ProteinModelPortal:F4HYJ6 SMR:F4HYJ6 PRIDE:F4HYJ6
EnsemblPlants:AT1G48650.2 GeneID:841287 KEGG:ath:AT1G48650
OMA:GRIAYND Uniprot:F4HYJ6
Length = 1206
Score = 469 (170.2 bits), Expect = 8.4e-83, Sum P(2) = 8.4e-83
Identities = 112/327 (34%), Positives = 189/327 (57%)
Query: 479 DYLDSALITVLQIHVDEPE--GDILLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPV 536
D + LI + H+ + E G +L+F+TG ++I+ + ++ E LG D ++++L
Sbjct: 558 DSIGFNLIENVLCHIVKGERPGAVLVFMTGWDDIN-SLKNQLEAHSLLG-DPNKVLLLAC 615
Query: 537 YSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLD 596
+ ++ S Q IF+ P G RK+V+ATN+AE S+TI+ + YVID G AK+ Y+
Sbjct: 616 HGSMASSEQRLIFDRPPEGIRKIVLATNMAETSITINDVVYVIDCGKAKETSYDALNNTP 675
Query: 597 SLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTM 656
L+ + IS+A+A QR GRAGR PG+CY LY Y + + PE+ R L L +
Sbjct: 676 CLLPSWISKAAARQRRGRAGRVMPGECYHLYPRCVYEA-FADYQQPELLRTPLQSLCLQI 734
Query: 657 KAMGINNLLSF--DFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLS 714
K++G+ ++ F + PP ++ +A+E L +GALD++ LT LGK ++ P++P L
Sbjct: 735 KSLGLGSISEFLSRALQPPEALSVQNAVEYLKIIGALDDDENLTPLGKNLSMLPVEPKLG 794
Query: 715 KMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQPE-GDHLTLLAVY 773
KML+ C D ++T++A + F P +++ A+ R++F + DHLTL+ Y
Sbjct: 795 KMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAETARSKFSGRDYSDHLTLVRAY 854
Query: 774 EAWK-AK--NFSLPWCGENFVNSRSLK 797
WK A+ + +C +NF++S++LK
Sbjct: 855 NGWKDAERTHSGYDYCWKNFLSSQTLK 881
Score = 444 (161.4 bits), Expect = 8.4e-83, Sum P(2) = 8.4e-83
Identities = 94/203 (46%), Positives = 137/203 (67%)
Query: 286 RRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGY-TTKG---KIGCTQ 341
R++LP +K K+ L++A+ NQV+++ GETG GKTTQL QY+ E+ +G I CTQ
Sbjct: 296 RKTLPAYKEKDALLKAIAANQVVVVSGETGCGKTTQLPQYILESEIEAARGATCSIICTQ 355
Query: 342 PRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLS 401
PRR++A SV++RVA E G ++GE VGY +R E G DT + + T G+LLR +L+D +L
Sbjct: 356 PRRISAISVSERVAAERGEQIGESVGYKVRLEGMRGRDTRLLFCTTGVLLRRLLVDRSLK 415
Query: 402 QYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSI 461
+ +++DE HER +N D L +LK L+ RRPDL+LI+ SATL+AE FS YF I
Sbjct: 416 GVTHVVVDEIHERGMNEDFLLIVLKDLLPRRPDLKLILMSATLNAELFSSYFGGAPAMHI 475
Query: 462 PGRTFPVDINYSRQEVTDYLDSA 484
PG T+PV ++ + DYL+++
Sbjct: 476 PGFTYPVRAHF----LEDYLETS 494
>UNIPROTKB|F1PER1 [details] [associations]
symbol:DHX32 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR007502
Pfam:PF04408 SMART:SM00847 GO:GO:0005524 GO:GO:0004386
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 CTD:55760 OMA:LACEQDI
EMBL:AAEX03015636 RefSeq:XP_003433686.1 Ensembl:ENSCAFT00000020520
GeneID:100685023 KEGG:cfa:100685023 Uniprot:F1PER1
Length = 745
Score = 828 (296.5 bits), Expect = 1.3e-82, P = 1.3e-82
Identities = 193/532 (36%), Positives = 305/532 (57%)
Query: 284 EQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAE---AGYTTKGKIGCT 340
++R LPI+K K ++ + NQ++I+ G+ GK++Q+ Q+ AE + + G + CT
Sbjct: 57 KEREDLPIWKEKYSFMENLLQNQIVIVSGDAKCGKSSQVPQWCAEYCLSIHYQHGGVVCT 116
Query: 341 QPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENL 400
Q + A +A RVA+E +G EVGY I FE+C +T+++Y TD ML RE++ L
Sbjct: 117 QVHKPTAVQLALRVADEMDVNIGHEVGYMIPFENCCSSETILRYCTDDMLQREMMSSPFL 176
Query: 401 SQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFS 460
Y VI+LD+ HER+I TDVL GLLK ++ RP+L+LI+ S+ + S Y+ N +
Sbjct: 177 GNYGVIILDDIHERSIATDVLLGLLKDVLLARPELKLIINSSPHLISKLSSYYGNVPLIE 236
Query: 461 IPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEK 520
+ + PV++ Y + L+S L + +IH +GDI++FL +++I+ A E +C++
Sbjct: 237 VK-KQHPVEVVYLSGAQKESLESILRLIFEIHQSGEKGDIVVFLACEQDIEKAYEIVCQE 295
Query: 521 IKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGG-------RKVVVATNIAEASLTID 573
L D+ ELVV+P+Y P E + +F+P R+VV+ + E+ + +
Sbjct: 296 GSNLNPDLGELVVVPLY---PKE-KCALFKPNDETEKRCQVYQRRVVLTASSGESLIWSN 351
Query: 574 GIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYR 633
+ +VID G ++ VYNP+ R +SLV PISQ+ A R G + GK + LY+E
Sbjct: 352 TVRFVIDVGVERRKVYNPRIRANSLVTQPISQSQAEIRKQILGSSSSGKLFCLYSEEFAS 411
Query: 634 SEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDE 693
+M P E+Q NL L MK + I L DF++ P+P++L+ A+E L L ALD
Sbjct: 412 KDMRPLKPAEMQEANLTSMVLFMKRVDIAGLGHCDFMNRPAPESLMQALEDLDYLAALDN 471
Query: 694 EGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTR-PRERQAKA 752
+G L++ G M+EFPLDP LSK +LAS + C +E+LTI AM+ + F+ P + A
Sbjct: 472 DGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVEEMLTIAAMVTAPNCFSNLPHGAEEAA 531
Query: 753 DEKRARFFQPEGDHLTLLAVYEAWK--AKNFSLP-----WCGENFVNSRSLK 797
F PEGDH TL+ +Y+A++ A N + WC + F+N +L+
Sbjct: 532 LTCWKTFLHPEGDHFTLINIYKAYQDIALNSTSDHCVEKWCHDYFLNCCALR 583
>UNIPROTKB|A7MBI4 [details] [associations]
symbol:DHX32 "DHX32 protein" species:9913 "Bos taurus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR007502 Pfam:PF04408
SMART:SM00847 GO:GO:0005524 GO:GO:0004386 InterPro:IPR014001
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 CTD:55760 OMA:LACEQDI OrthoDB:EOG4N30NF
EMBL:DAAA02059534 EMBL:DAAA02059535 EMBL:DAAA02059536 EMBL:BC151578
IPI:IPI00715161 RefSeq:NP_001094614.1 UniGene:Bt.44006
Ensembl:ENSBTAT00000007619 GeneID:532978 KEGG:bta:532978
InParanoid:A7MBI4 NextBio:20875863 Uniprot:A7MBI4
Length = 744
Score = 827 (296.2 bits), Expect = 1.7e-82, P = 1.7e-82
Identities = 190/532 (35%), Positives = 302/532 (56%)
Query: 284 EQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTK---GKIGCT 340
++R LPI+K K ++ + +Q++I+ G+ GK++Q+ Q+ AE + G + CT
Sbjct: 57 KEREDLPIWKEKYSFMEKLLQSQIVIVSGDAKCGKSSQVPQWCAEYCLSIDYRHGGVVCT 116
Query: 341 QPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENL 400
Q + A +A RVA+E +G EVGY I FE+C +T+++Y TD ML RE++ + L
Sbjct: 117 QVHKPTAVQLALRVADEMDVNIGHEVGYVIPFENCCTSETILRYCTDDMLQREMMSNPFL 176
Query: 401 SQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFS 460
Y VI+LD+ HER++ TDVL GLLK ++ RP+L+LI+ S+ + S Y+ N +
Sbjct: 177 GSYGVIILDDIHERSMATDVLLGLLKDVLLARPELKLIINSSPHLINKLSSYYGNVPLIQ 236
Query: 461 IPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEK 520
+ + PV+ Y + +S L + +IH +GDI++FL +++I+ A E +C++
Sbjct: 237 VKNK-HPVEAVYLSGAQKESFESILRLIFEIHHSGEKGDIVVFLACEQDIEKAYEIVCQE 295
Query: 521 IKALGKDVPELVVLPVYSALPSEIQSRIFEP-------APPGGRKVVVATNIAEASLTID 573
L D+ ELVV+P+Y P E + +F+P P R+VV+ + E+ + +
Sbjct: 296 GSNLNPDLGELVVVPLY---PKE-KCALFKPNDETEKRCPVYQRRVVLTASSGESLICSN 351
Query: 574 GIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYR 633
+ +VID G ++ VYNP+ R DSLV PISQ+ A R + GK + LY+E
Sbjct: 352 TVKFVIDVGVERRKVYNPRIRADSLVTQPISQSQAETRKQILSASPSGKLFCLYSEEFAS 411
Query: 634 SEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDE 693
+M P E+Q NL L MK + I L DF++ P+P++L+ A+E L L ALD
Sbjct: 412 RDMQPLKPAEMQEANLTSMVLFMKRVDIAGLGHCDFMNRPAPESLMQALEDLDYLAALDN 471
Query: 694 EGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTR-PRERQAKA 752
+G L++ G M+EFPLDP LSK +LAS + C DE+LTI AM+ + F+ PR + A
Sbjct: 472 DGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVDEMLTIAAMVTAPNCFSHLPRGAEEAA 531
Query: 753 DEKRARFFQPEGDHLTLLAVYEAWKAKNFSLP-------WCGENFVNSRSLK 797
F P+GDH TL+ +Y+A++ + WC + F+N +L+
Sbjct: 532 LSCWKTFLHPDGDHFTLINIYKAYQDMTLNAASEHCVEKWCHDYFLNCSALR 583
>TAIR|locus:2038796 [details] [associations]
symbol:AT2G01130 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00358
SMART:SM00490 SMART:SM00847 InterPro:IPR014720 GO:GO:0005524
EMBL:CP002685 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14442 IPI:IPI00528464
RefSeq:NP_178223.2 UniGene:At.42514 ProteinModelPortal:F4IM84
SMR:F4IM84 PRIDE:F4IM84 EnsemblPlants:AT2G01130.1 GeneID:814642
KEGG:ath:AT2G01130 OMA:PSWISKV Uniprot:F4IM84
Length = 1113
Score = 458 (166.3 bits), Expect = 6.5e-82, Sum P(3) = 6.5e-82
Identities = 119/327 (36%), Positives = 185/327 (56%)
Query: 479 DYLDSALITVLQIHVDEPEGD--ILLFLTGQEEIDFACESLCEKIKALGKDVPELVVL-P 535
D + LI L ++ E EG IL+FLTG ++I E L +I + + P+LV+L
Sbjct: 478 DCIGFNLIEFLLCNICENEGPGGILIFLTGWDDISSLKEKL--QIHPIFGN-PDLVMLLA 534
Query: 536 VYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRL 595
+ ++ + Q IFE G RK+V+ATNIAE S+TI+ + +VID G AK+ Y+
Sbjct: 535 CHGSMETFEQRLIFEEPASGVRKIVLATNIAETSITINDVAFVIDCGKAKETSYDALNNT 594
Query: 596 DSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLT 655
L+ + IS+ SA QR GRAGR PG+CY LY + Y + + +PEI R L L
Sbjct: 595 PCLLPSWISKVSAQQRRGRAGRVRPGQCYHLYPKCVYDA-FAEYQLPEILRTPLHSLCLQ 653
Query: 656 MKAMGINNLLSFDFVDPPSPQALI--SAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPL 713
+K++ + ++ F SP+ L A+ L +GALDE LT LG+ +++ P++P L
Sbjct: 654 IKSLNLGSISEFLSRALQSPELLAVQKAIAFLKIIGALDENEDLTTLGRYLSKLPMEPKL 713
Query: 714 SKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQPEGDHLTLLAVY 773
KML+ LGC D ILT+ A + F P++++ A+ +++F + DHL L+ Y
Sbjct: 714 GKMLILGAILGCLDPILTVAAGLSVRDPFLTPQDKKDLAEAAKSQFSRDHSDHLALVRAY 773
Query: 774 EAWK-AKNFSL--PWCGENFVNSRSLK 797
E WK A+ S +C +NF++ +SL+
Sbjct: 774 EGWKKAEEESAVYDYCWKNFLSIQSLR 800
Score = 454 (164.9 bits), Expect = 6.5e-82, Sum P(3) = 6.5e-82
Identities = 106/252 (42%), Positives = 152/252 (60%)
Query: 235 EDPMPETGERHLAQELRGVGLSARDMPEWKKNAYGKAFTFGQRSKLSIQEQRRSLPIFKL 294
E P+P + + L Q L RD + Y +A GQR + + R SLP FK
Sbjct: 179 EQPLPISATKILWQR----SLQLRD-----RQQYWQASVEGQR----MLDSRTSLPAFKQ 225
Query: 295 KNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGY-TTKG---KIGCTQPRRVAATSV 350
++ ++ A+ NQV+++ GETG GKTTQ+ Q++ E+ +G I CTQPRR++A SV
Sbjct: 226 RHSVLTAISQNQVIVISGETGCGKTTQIPQFILESEIEANRGAFSSIICTQPRRISAMSV 285
Query: 351 AKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIMLDE 410
++RVA E G +LGE VGY +R E G DT + + T G+LLR +L+D NL + +++DE
Sbjct: 286 SERVAYERGEQLGESVGYKVRLEGVKGRDTRLLFCTTGILLRRLLVDRNLRGVTHVIVDE 345
Query: 411 AHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPVDI 470
HER +N D L +LK L+ RR +L+LI+ SATLDAE FS YF + IPG T+PV
Sbjct: 346 IHERGMNEDFLLIILKDLLSRRSELKLILMSATLDAELFSSYFGGAGVIYIPGFTYPVRS 405
Query: 471 NYSRQ--EVTDY 480
++ E+T Y
Sbjct: 406 HFLEDILEMTRY 417
Score = 37 (18.1 bits), Expect = 6.5e-82, Sum P(3) = 6.5e-82
Identities = 15/52 (28%), Positives = 26/52 (50%)
Query: 8 RELT-YLSLLSKICSELETHLGF----IDKVLAEFISESGRNSETVEIFDDK 54
RE+ + LL ++ + L +L ID+V A +S + S T E F ++
Sbjct: 129 REVNLHTDLLQRVEAYLTEYLSKSSNRIDRVPANSVSRTSSISSTDEWFSEQ 180
>TAIR|locus:2039280 [details] [associations]
symbol:AT2G35920 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006499
"N-terminal protein myristoylation" evidence=RCA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14442 OMA:RIRNRSY IPI:IPI00520060
RefSeq:NP_850255.1 UniGene:At.27892 ProteinModelPortal:F4ILR7
SMR:F4ILR7 PRIDE:F4ILR7 EnsemblPlants:AT2G35920.1 GeneID:818165
KEGG:ath:AT2G35920 Uniprot:F4ILR7
Length = 995
Score = 468 (169.8 bits), Expect = 8.0e-82, Sum P(2) = 8.0e-82
Identities = 123/329 (37%), Positives = 186/329 (56%)
Query: 481 LDSALITVLQIHVDEPEGD--ILLFLTGQEEIDFACESLCEKIKA---LGKDVPELVVLP 535
+D L+ H+ EG IL+FLTG +EI L EKI LG D + +VLP
Sbjct: 485 IDVDLVEATIEHICRLEGGGAILVFLTGWDEIS----KLLEKINMNNFLG-DSSKFLVLP 539
Query: 536 VYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRL 595
++ ++P+ Q IF+ PP RK+V+ATNIAE+S+TID + YV+D G AK+ Y+ ++
Sbjct: 540 LHGSMPTVNQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKV 599
Query: 596 DSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLT 655
L+ + IS+ASA QR GRAGR G CYRLY + Y + +PEI R L L
Sbjct: 600 ACLLPSWISKASAHQRRGRAGRVQAGVCYRLYPKVIYDA-FPQYQLPEIIRTPLQELCLH 658
Query: 656 MKAMGINNLLSF--DFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPL 713
+K++ + ++ SF + PP A+ +A+E L ++GAL++ LT LG+ + P+DP +
Sbjct: 659 IKSLQVGSIGSFLAKALQPPDALAVENAIELLKTIGALNDVEELTPLGRHLCTLPVDPNI 718
Query: 714 SKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQPEG--DHLTLLA 771
KMLL C + LTI A + F P R+ +ADE + R+F + DH+ LL
Sbjct: 719 GKMLLIGAIFQCVNPALTIAAALAYRSPFVLPLNRKEEADEAK-RYFAGDSCSDHIALLK 777
Query: 772 VYEAWK-AKNFS--LPWCGENFVNSRSLK 797
YE ++ AK +C +NF++ +L+
Sbjct: 778 AYEGYRDAKRGGNEKDFCWQNFLSPVTLR 806
Score = 432 (157.1 bits), Expect = 8.0e-82, Sum P(2) = 8.0e-82
Identities = 91/187 (48%), Positives = 123/187 (65%)
Query: 286 RRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTT-KG---KIGCTQ 341
R LP FK+K E + +V NQVL++ GETG GKTTQL Q++ E ++ +G I CTQ
Sbjct: 225 REKLPAFKMKEEFLNSVSQNQVLVVSGETGCGKTTQLPQFILEEEISSLRGADCNIICTQ 284
Query: 342 PRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLS 401
PRR++A SVA R++ E G +GE VGY IR E T + + T G+LLR ++ D NL+
Sbjct: 285 PRRISAISVASRISAERGESIGESVGYQIRLESKRSDQTRLLFCTTGVLLRRLIEDPNLT 344
Query: 402 QYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSI 461
S +++DE HER +N D L +L+ L+ RRPDLRLI+ SAT++A+ FS YF N I
Sbjct: 345 NVSHLLVDEIHERGMNEDFLLIILRDLLPRRPDLRLILMSATINADMFSTYFGNSPTMHI 404
Query: 462 PGRTFPV 468
PG TFPV
Sbjct: 405 PGFTFPV 411
>UNIPROTKB|F1SDM5 [details] [associations]
symbol:DHX32 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR007502 Pfam:PF04408 SMART:SM00847 GO:GO:0004386
InterPro:IPR011709 Pfam:PF07717 GeneTree:ENSGT00650000093246
OMA:LACEQDI EMBL:CT841550 Ensembl:ENSSSCT00000011756 Uniprot:F1SDM5
Length = 742
Score = 820 (293.7 bits), Expect = 9.4e-82, P = 9.4e-82
Identities = 192/533 (36%), Positives = 307/533 (57%)
Query: 284 EQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAE---AGYTTKGKIGCT 340
++R LPI+K K ++ + +QV+I+ G+ GK++Q+ Q+ AE + + G + CT
Sbjct: 57 KEREDLPIWKEKYSFMENLLQSQVVIVSGDATCGKSSQVPQWCAEYCLSIHYQHGGVVCT 116
Query: 341 QPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENL 400
Q + A +A RVA+E +G EVGY I FE+C +T+++Y TD ML RE++ + L
Sbjct: 117 QVHKQTAVQLALRVADEMDVNIGHEVGYVIPFENCCTSETILRYCTDDMLQREMMSNPFL 176
Query: 401 SQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFS 460
Y VI+LD+ ER+I TDVL GLLK ++ RP+L+LI+ S+ S Y+ N +
Sbjct: 177 GSYGVIILDDVQERSIATDVLLGLLKDVLLARPELKLIINSSPHLISTLSSYYGNVPLIE 236
Query: 461 IPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEK 520
+ + PV++ Y + L++ L + +IH EGDI++FL +++I+ A E +C++
Sbjct: 237 VTSKR-PVEVVYLSGAQKEALEAVLRLIFEIHHSGEEGDIVVFLACEQDIEKAYEIVCQE 295
Query: 521 IKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGG-------RKVVVATNIAEASLTID 573
L D+ ELVV+P+Y P E + +F+P R+VV+ + E+ + +
Sbjct: 296 GTNLNPDLGELVVVPLY---PKE-KCALFKPNDEAEKRCQVYQRRVVLTASSGESLIWSN 351
Query: 574 GIFYVIDPGFAKQN-VYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAY 632
+ +VID G ++ VY+P+ R DSLV+ PISQ+ A R G + GK + LY+E
Sbjct: 352 TVRFVIDVGVERRKKVYSPRIRADSLVLQPISQSQAEMRKQVLGSSSSGKLFCLYSEEFA 411
Query: 633 RSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALD 692
+M P E+Q NL L MK + I L DF++ P+P++L+ A+E L L ALD
Sbjct: 412 SKDMRPLKPAEMQHANLTSMVLFMKRVDIAGLGHCDFMNRPAPESLMQALEDLDYLAALD 471
Query: 693 EEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTR-PRERQAK 751
+G L++ G M+EFPLDP LSK +LAS + C DE+LTI AM+ + F+ P +A+
Sbjct: 472 NDGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVDEMLTIAAMVTAPNCFSHLPSGAEAE 531
Query: 752 ADEKRARFFQPEGDHLTLLAVYEAWK-------AKNFSLPWCGENFVNSRSLK 797
A F PEGDH TL+ +Y+A++ +++ WC + F+N +L+
Sbjct: 532 ALTCWKTFLHPEGDHFTLVNLYKAFQDVTLNSTSEHCVEKWCHDYFLNCSALR 584
>TAIR|locus:504954904 [details] [associations]
symbol:ABO6 "ABA overly sensitive 6" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA;ISS] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00358
SMART:SM00490 SMART:SM00847 InterPro:IPR014720 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003725 EMBL:AB005245 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 EMBL:AB008271 HOGENOM:HOG000247063
KO:K14442 EMBL:AB025625 IPI:IPI00533344 RefSeq:NP_680142.2
UniGene:At.45659 ProteinModelPortal:Q9FF84 SMR:Q9FF84 PaxDb:Q9FF84
PRIDE:Q9FF84 EnsemblPlants:AT5G04895.1 GeneID:830371
KEGG:ath:AT5G04895 TAIR:At5g04895 InParanoid:Q9FF84 OMA:MRAGHSP
PhylomeDB:Q9FF84 ProtClustDB:CLSN2680421 Genevestigator:Q9FF84
Uniprot:Q9FF84
Length = 1161
Score = 460 (167.0 bits), Expect = 6.9e-81, Sum P(2) = 6.9e-81
Identities = 116/330 (35%), Positives = 188/330 (56%)
Query: 479 DYLDSALITVLQIHVDEPE--GDILLFLTGQEEIDFACESLCEKIKA---LGKDVPELVV 533
D + LI + H+ E G +L+FLTG ++I SL ++IKA LG D +++
Sbjct: 519 DCIGFNLIEAVLCHICRKERPGAVLVFLTGWDDI----RSLSDQIKAHPLLG-DPNRVLL 573
Query: 534 LPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQ 593
L + ++ + Q IFE APP RK+V+ATN+AEAS+TI+ + +V+D G AK+ Y+
Sbjct: 574 LMCHGSMATAEQRLIFERAPPNIRKIVLATNMAEASITINDVVFVVDCGKAKETTYDALN 633
Query: 594 RLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTT 653
L+ + ISQASA QR GRAGR PG+CY LY + Y + + +PE+ R L
Sbjct: 634 NTPCLLPSWISQASARQRRGRAGRLFPGECYHLYPKCVYDA-FAEYQLPELLRTPLNSLC 692
Query: 654 LTMKAMGINNLLSFDFVDPPSPQALI--SAMEQLYSLGALDEEGLLTKLGKKMAEFPLDP 711
L +K++ + ++ F +P++L +A+ L +GALDE+ LT LGK ++ P+DP
Sbjct: 693 LQIKSLQVESIAEFLSAALQAPESLAVQNAIGFLKMIGALDEKENLTDLGKLLSILPVDP 752
Query: 712 PLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQPE-GDHLTLL 770
L KML+ C D ILTI++ + F P++++ A + RF + DH+ L+
Sbjct: 753 KLGKMLIMGAIFRCFDPILTIVSGLSVRDPFLLPQDKKDLALSAKLRFSAKDYSDHMALV 812
Query: 771 AVYEAWK---AKNFSLPWCGENFVNSRSLK 797
+E WK + + +C NF+++++L+
Sbjct: 813 RAFEGWKDAEREGSAYEFCWRNFLSAQTLQ 842
Score = 435 (158.2 bits), Expect = 6.9e-81, Sum P(2) = 6.9e-81
Identities = 94/203 (46%), Positives = 133/203 (65%)
Query: 284 EQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTT-KG---KIGC 339
E R++LP FK K L+QA+ NQV+++ GETG GKTTQL QY+ E+ + +G I C
Sbjct: 255 EFRKTLPSFKDKERLLQAIARNQVIVVSGETGCGKTTQLPQYILESEIESGRGAFCNIIC 314
Query: 340 TQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDEN 399
TQPRR++A +V++RV+ E G LGE VG+ +R E G +T + + T G+LLR +L D N
Sbjct: 315 TQPRRISAMAVSERVSAERGEPLGETVGFKVRLEGMRGKNTHLLFCTSGILLRRLLSDRN 374
Query: 400 LSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIF 459
L+ + + +DE HER +N D L +LK+L+ RRPDLRL++ SATL+AE FS Y+
Sbjct: 375 LNGVTHVFVDEIHERGMNEDFLIIVLKELLPRRPDLRLVLMSATLNAELFSNYYGGAPTI 434
Query: 460 SIPGRTFPVDINYSRQ--EVTDY 480
IPG T PV ++ E+T Y
Sbjct: 435 HIPGFTHPVKAHFLEDVLEITGY 457
>UNIPROTKB|E1C9C2 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 OMA:AKLQPRT EMBL:AADN02034854
IPI:IPI00601367 Ensembl:ENSGALT00000004688 Uniprot:E1C9C2
Length = 1145
Score = 475 (172.3 bits), Expect = 1.4e-79, Sum P(2) = 1.4e-79
Identities = 108/246 (43%), Positives = 157/246 (63%)
Query: 282 IQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTK-GKIGCT 340
IQE R LPI + +++A+++N ++++ GETGSGKTTQ+ Q+L EAGYT+ G IG T
Sbjct: 235 IQEARLKLPILAEEQVIMEAINENPIVVICGETGSGKTTQVPQFLYEAGYTSSNGIIGIT 294
Query: 341 QPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENL 400
+PRRVAA S+++RVA+E V Y IR+E T +T IK+MTDG+LL+E+ D L
Sbjct: 295 EPRRVAAVSMSQRVAKEMNLS-HRVVSYQIRYEGNTTDETQIKFMTDGVLLKEVQKDFLL 353
Query: 401 SQYSVIMLDEAHERTINTDVLFGLLKQLV----KRRPDLRLIVTSATLDAERFSG---YF 453
S+Y VI++DEAHER++ TD+L GLL ++V K+ L+LI+ SATL E F+ F
Sbjct: 354 SKYKVIIIDEAHERSMYTDILIGLLSRIVPLREKKGLPLKLIIMSATLRVEDFTENTRLF 413
Query: 454 FNCN-IFSIPGRTFPVDINYSRQE-VTDYLDSALITVLQIHVDEPEGDILLFLTGQEEID 511
+ + R FPV ++++++ + DY V +IH P G IL+FLTGQ E+
Sbjct: 414 AGTPPVLQVDARQFPVTVHFNKKTPLDDYSGECFRKVCKIHRMLPSGGILVFLTGQAEVH 473
Query: 512 FACESL 517
C L
Sbjct: 474 SLCRRL 479
Score = 406 (148.0 bits), Expect = 1.4e-79, Sum P(2) = 1.4e-79
Identities = 105/276 (38%), Positives = 150/276 (54%)
Query: 531 LVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYN 590
L VLP+YS L E Q+++F P PPG R VVATN+AE SLTI GI YV+D G K+ Y+
Sbjct: 577 LYVLPLYSLLAPEKQAKVFRPPPPGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRFYD 636
Query: 591 PKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLV 650
+ S +T ISQASA QRAGRAGRT PG CYRLY+ + + + + PEI + +
Sbjct: 637 KITGVSSFRVTWISQASANQRAGRAGRTEPGHCYRLYSSAVFM-DFEKFSAPEITKRPVE 695
Query: 651 HTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGL-------------- 696
L MKA+ I +++F F PP +AL +A E L +LGAL E +
Sbjct: 696 DLILQMKALNIEKVINFPFPTPPPTEALAAAEELLIALGALKEPPMTGRLKEQQAAKLSC 755
Query: 697 -LTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEK 755
++ LG+ MA FP+ P +KML S C +TI++ + +F +R A ++E+
Sbjct: 756 PISPLGRVMATFPVAPRYAKMLALSRQHDCLPYTITIVSAMTVRELFEE-FDRPAASEEE 814
Query: 756 RARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFV 791
+ +G L+ + W + SL G+ V
Sbjct: 815 TVKLKGKKG---RLVQMQRIWAGQG-SLQKLGDLMV 846
Score = 44 (20.5 bits), Expect = 1.2e-33, Sum P(2) = 1.2e-33
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 399 NLSQYSVIMLDEAHE-RTINTD 419
NL Y+V+ +DE E R TD
Sbjct: 527 NLDNYAVVPVDEGDEDRDAETD 548
>UNIPROTKB|E1BNQ2 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647 EMBL:DAAA02045204
IPI:IPI00698261 RefSeq:NP_001192890.1 UniGene:Bt.8113 PRIDE:E1BNQ2
Ensembl:ENSBTAT00000027206 GeneID:529207 KEGG:bta:529207
OMA:ANCRDAL NextBio:20874985 Uniprot:E1BNQ2
Length = 1155
Score = 451 (163.8 bits), Expect = 2.7e-79, Sum P(3) = 2.7e-79
Identities = 104/246 (42%), Positives = 153/246 (62%)
Query: 282 IQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGK-IGCT 340
+QE+R LPI + +++AV ++ ++I+ GETGSGKTTQ+ Q+L EAGY++ IG T
Sbjct: 243 MQEERLKLPILSEEQVIMEAVAEHPIVIICGETGSGKTTQVPQFLYEAGYSSDNSVIGVT 302
Query: 341 QPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENL 400
+PRRVAA ++++RVA+E V Y IR+E +T IK+MTDG+LL+EI D L
Sbjct: 303 EPRRVAAVAMSQRVAKEMNLS-PRVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQKDFLL 361
Query: 401 SQYSVIMLDEAHERTINTDVLFGLLKQLV----KRRPDLRLIVTSATLDAERFSGY--FF 454
+Y V+++DEAHER++ TD+L GLL ++V KR L+L++ SATL E F+ F
Sbjct: 362 LKYKVVIIDEAHERSVYTDILIGLLSRIVCLREKRHLPLKLLIMSATLRVEDFTQNQRLF 421
Query: 455 NCN--IFSIPGRTFPVDINYS-RQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEID 511
+ + R FPV ++++ R + DY V +IH P G IL+FLTGQ E+
Sbjct: 422 TQPPPVIKVESRQFPVTVHFNKRTPLEDYSGECFRKVCKIHRMLPAGGILVFLTGQAEVH 481
Query: 512 FACESL 517
C L
Sbjct: 482 ALCRRL 487
Score = 424 (154.3 bits), Expect = 2.7e-79, Sum P(3) = 2.7e-79
Identities = 111/269 (41%), Positives = 151/269 (56%)
Query: 531 LVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYN 590
L VLP+YS L E Q+++F+P P G R VVATN+AE SLTI GI YV+D G K+ Y+
Sbjct: 586 LHVLPLYSLLAPEKQAQVFQPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRHYD 645
Query: 591 PKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRS-EMSPTTIPEIQRINL 649
+ S +T +SQASA QRAGRAGRT PG CYRLY+ + + E P PEI R +
Sbjct: 646 RVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFGDFEKYPP--PEITRRPV 703
Query: 650 VHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDE----EGL--------- 696
L MKA+ I +++F F PPS +ALI+A E L +LGAL E +
Sbjct: 704 EDLILQMKALNIEKVINFPFPTPPSVEALIAAEELLIALGALQAPPKTERVKQLQRSRLS 763
Query: 697 --LTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADE 754
+T+LG+ MA FP+ P +KML S GC +TI+A + +F +R A +DE
Sbjct: 764 CPITELGRTMATFPVAPRYAKMLALSRQHGCLPYTITIVAAMTVRELFEE-LDRPAASDE 822
Query: 755 KRARFFQPEGDHLTLLAVYEAWKAKNFSL 783
+ AR +G + + W + SL
Sbjct: 823 ELARL---KGKRARVAQMKRIWAGQGASL 848
Score = 51 (23.0 bits), Expect = 2.7e-79, Sum P(3) = 2.7e-79
Identities = 11/36 (30%), Positives = 22/36 (61%)
Query: 194 EGSLSRTAALQSALTKERREVREQQLRTMIDSIPKD 229
+GS + ++L A K RR+ E++ + +DS P++
Sbjct: 138 QGS-EKISSLSGAHRKRRRQEAEEESESSVDSEPEE 172
>UNIPROTKB|Q05B79 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043330 "response to exogenous dsRNA" evidence=IEA]
[GO:0009615 "response to virus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0009615 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:DAAA02002574
EMBL:DAAA02002573 EMBL:BC122652 IPI:IPI00686397
RefSeq:NP_001073720.1 UniGene:Bt.103344 Ensembl:ENSBTAT00000008082
GeneID:509583 KEGG:bta:509583 InParanoid:Q05B79 NextBio:20869030
Uniprot:Q05B79
Length = 1010
Score = 473 (171.6 bits), Expect = 4.2e-79, Sum P(2) = 4.2e-79
Identities = 112/327 (34%), Positives = 184/327 (56%)
Query: 481 LDSALITVL--QIHVDEPEGDILLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPVYS 538
+D LI L I ++E +G IL+FL G + I + L ++ D + +++P++S
Sbjct: 472 VDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVM-FKSD--KFIIIPLHS 528
Query: 539 ALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSL 598
+P+ Q+++F+ PPG RK+V+ATNIAE S+TID + YVID G K+ ++ + + ++
Sbjct: 529 LMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTM 588
Query: 599 VITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKA 658
+S+A+A QR GRAGR PG CY LY S S + +PEI R L L +K
Sbjct: 589 SAEWVSKANAKQRKGRAGRVQPGHCYHLYN-SLRASLLDDYQLPEILRTPLEELCLQIKI 647
Query: 659 MGINNLLSF--DFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLSKM 716
+ + + F +DPPS +A++ +++ L L ALD++ LT LG +A P++P + KM
Sbjct: 648 LRLGGIAHFLSRLMDPPSNEAVLLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKM 707
Query: 717 LLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQP-EGDHLTLLAVYEA 775
+L C D +LTI A + F P ++ AD +R + + DHLT++ ++
Sbjct: 708 ILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKVADARRKELAKDTKSDHLTVVNAFKG 767
Query: 776 W-KAKN----FSLPWCGENFVNSRSLK 797
W KAK + +C E F++S +L+
Sbjct: 768 WEKAKQRGFRYEKDYCWEYFLSSNTLQ 794
Score = 401 (146.2 bits), Expect = 4.2e-79, Sum P(2) = 4.2e-79
Identities = 87/208 (41%), Positives = 130/208 (62%)
Query: 280 LSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGK--- 336
+ +Q R LP + ++ EL+ + ++QV ++ GETG GKTTQ+ Q++ + Y +GK
Sbjct: 200 IEMQRFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILD-NYIERGKGSA 258
Query: 337 --IGCTQPRRVAATSVAKRVAEEFG--CRLGEEVGYAIRFED-CTGPDTVIKYMTDGMLL 391
I CTQPRR++A SVA+RVA E C G GY IR + I Y T G++L
Sbjct: 259 CRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIIL 318
Query: 392 REILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSG 451
+ + D +LS S I+LDE HER + +DVL ++K L+ RPDL++++ SATL+AE+FS
Sbjct: 319 QWLQSDPHLSSVSHIVLDEIHERNLQSDVLMTVVKDLLSYRPDLKVVLMSATLNAEKFSE 378
Query: 452 YFFNCNIFSIPGRTFPVDINYSRQEVTD 479
YF NC + IPG TFPV + Y +++ +
Sbjct: 379 YFGNCPMIHIPGFTFPV-VEYLLEDIIE 405
Score = 42 (19.8 bits), Expect = 2.6e-41, Sum P(2) = 2.6e-41
Identities = 32/137 (23%), Positives = 54/137 (39%)
Query: 190 FKNPEGSLSRTAALQSALTKERREVREQQLRTMIDSIPKDLNRPWEDPMPETGERHLAQE 249
+ +G ++ A Q E RE+Q+ ++ S+ D E A E
Sbjct: 69 YAKKQGQKNKEAERQERAVVHMDERREEQIVQLLHSVQTK-----NDKDEEAQISWFAPE 123
Query: 250 LRGVGLSARDMPEWKKNAYGKAFTFGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLI 309
G G A E K N+ Q K+ QE+R P F+++++ I D++ L+
Sbjct: 124 DHGYGTEAP--AENKPNSVKNVEH--QEKKMINQEKR---P-FRIRDKYID--RDSEYLL 173
Query: 310 LIGETGSGKTTQLAQYL 326
E + QL + L
Sbjct: 174 QENEPDATLDQQLLEDL 190
Score = 40 (19.1 bits), Expect = 4.2e-41, Sum P(2) = 4.2e-41
Identities = 14/48 (29%), Positives = 27/48 (56%)
Query: 391 LREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLI 438
+R+ ID + S+Y ++ + + T++ LL+ L K++ DLR I
Sbjct: 160 IRDKYIDRD-SEY--LLQENEPDATLDQQ----LLEDLQKKKTDLRYI 200
Score = 38 (18.4 bits), Expect = 6.8e-41, Sum P(2) = 6.8e-41
Identities = 11/49 (22%), Positives = 19/49 (38%)
Query: 24 ETHLGFIDKVLAEFISESGRNSETVEIFDDKLKEYGADLPNYLVRTLFN 72
+ HL + ++ + I E S+ + L Y DL L+ N
Sbjct: 324 DPHLSSVSHIVLDEIHERNLQSDVLMTVVKDLLSYRPDLKVVLMSATLN 372
>UNIPROTKB|I3LU50 [details] [associations]
symbol:I3LU50 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0008026 GeneTree:ENSGT00700000104421
Ensembl:ENSSSCT00000026672 OMA:GHEVAFS Uniprot:I3LU50
Length = 265
Score = 795 (284.9 bits), Expect = 4.2e-79, P = 4.2e-79
Identities = 154/264 (58%), Positives = 205/264 (77%)
Query: 349 SVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIML 408
SVAKRV+EE G LGEEVGYAIRFEDCT T+IKYMTDG+LLRE L + +L YS I++
Sbjct: 2 SVAKRVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLRESLREADLDHYSAIIM 61
Query: 409 DEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPV 468
DEAHER++NTDVLFGLL+++V RR DL+LIVTSAT+DAE+F+ +F N IF IPGRTFPV
Sbjct: 62 DEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFASFFGNVPIFHIPGRTFPV 121
Query: 469 DINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEKIKALGKDV 528
DI +S+ DY+++A+ LQ+H+ GDIL+F+ GQE+I+ + + E ++ L ++
Sbjct: 122 DILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEEL-ENA 180
Query: 529 PELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNV 588
P L VLP+YS LPS++Q++IF+ AP G RK +VATNIAE SLT+DGI +VID G+ K V
Sbjct: 181 PALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKV 240
Query: 589 YNPKQRLDSLVITPISQASALQRA 612
+NP+ +D+L I PISQA+A QR+
Sbjct: 241 FNPRIGMDALQIYPISQANANQRS 264
>MGI|MGI:1919412 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IDA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009615 "response to virus"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0043330 "response to exogenous dsRNA" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1919412 GO:GO:0005524 GO:GO:0005634 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0043330 EMBL:CH466530 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:AF448804 EMBL:AC114424
EMBL:AK129373 EMBL:AK013031 IPI:IPI00351266 RefSeq:NP_082412.2
UniGene:Mm.224233 ProteinModelPortal:Q8VHK9 DIP:DIP-48576N
STRING:Q8VHK9 PhosphoSite:Q8VHK9 PaxDb:Q8VHK9 PRIDE:Q8VHK9
Ensembl:ENSMUST00000029336 GeneID:72162 KEGG:mmu:72162
UCSC:uc008pjn.2 InParanoid:Q8VHK9 ChiTaRS:DHX36 NextBio:335597
CleanEx:MM_DHX36 Genevestigator:Q8VHK9
GermOnline:ENSMUSG00000027770 Uniprot:Q8VHK9
Length = 1001
Score = 471 (170.9 bits), Expect = 1.8e-78, Sum P(2) = 1.8e-78
Identities = 112/329 (34%), Positives = 183/329 (55%)
Query: 479 DYLDSALITVL--QIHVDEPEGDILLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPV 536
D +D LI L I ++E +G IL+FL G + I + L ++ D + +++P+
Sbjct: 461 DKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVM-FKSD--KFLIIPL 517
Query: 537 YSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLD 596
+S +P+ Q+++F+ PPG RK+V+ATNIAE S+TID + YVID G K+ ++ + +
Sbjct: 518 HSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNIS 577
Query: 597 SLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTM 656
++ +S+A+A QR GRAGR PG CY LY S + +PEI R L L +
Sbjct: 578 TMSAEWVSKANAKQRKGRAGRVQPGHCYHLYN-GLRASLLDDYQLPEILRTPLEELCLQI 636
Query: 657 KAMGINNLLSF--DFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLS 714
K + + + F +DPPS +A++ +++ L L ALD++ LT LG +A P++P +
Sbjct: 637 KILRLGGIAYFLSRLMDPPSNEAVVLSIKHLMELSALDKQEELTPLGVHLARLPVEPHIG 696
Query: 715 KMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFF-QPEGDHLTLLAVY 773
KM+L C D +LTI A + F P ++ AD +R + DHLT++ +
Sbjct: 697 KMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARRKELAKETRSDHLTVVNAF 756
Query: 774 EAWK-AKN----FSLPWCGENFVNSRSLK 797
E W+ AK + +C E F++S +L+
Sbjct: 757 EGWEEAKRRGFRYEKDYCWEYFLSSNTLQ 785
Score = 397 (144.8 bits), Expect = 1.8e-78, Sum P(2) = 1.8e-78
Identities = 87/208 (41%), Positives = 130/208 (62%)
Query: 280 LSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGK--- 336
+ +Q R+ LP + ++ EL+ ++++QV ++ GETG GKTTQ+ Q++ + Y +GK
Sbjct: 191 IEMQRFRKKLPSYGMQKELVNLINNHQVTVISGETGCGKTTQVTQFILD-NYIERGKGSA 249
Query: 337 --IGCTQPRRVAATSVAKRVAEEFG--CRLGEEVGYAIRFED-CTGPDTVIKYMTDGMLL 391
I CTQPRR++A SVA+RVA E C G GY IR + I Y T G++L
Sbjct: 250 CRIVCTQPRRISAISVAERVATERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIIL 309
Query: 392 REILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSG 451
+ + D LS S I+LDE HER + +DVL ++K L+ R DL++I+ SATL+AE+FS
Sbjct: 310 QWLQSDSRLSSVSHIVLDEIHERNLQSDVLMTVIKDLLHFRSDLKVILMSATLNAEKFSE 369
Query: 452 YFFNCNIFSIPGRTFPVDINYSRQEVTD 479
YF NC + IPG TFPV + Y +++ +
Sbjct: 370 YFGNCPMIHIPGFTFPV-VEYLLEDIIE 396
>UNIPROTKB|F6V8H1 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RIRNRSY Ensembl:ENSCAFT00000013769
EMBL:AAEX03013695 Uniprot:F6V8H1
Length = 1122
Score = 467 (169.5 bits), Expect = 2.8e-78, Sum P(2) = 2.8e-78
Identities = 111/329 (33%), Positives = 182/329 (55%)
Query: 479 DYLDSALITVLQIHV--DEPEGDILLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPV 536
D +D LI L H+ +E +G IL+FL G + I + L ++ D +++P+
Sbjct: 582 DKVDLNLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVM-FKSD--RFLIIPL 638
Query: 537 YSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLD 596
+S +P+ Q+++F+ PPG RK+V+ATNIAE S+TID + YVID G K+ ++ + +
Sbjct: 639 HSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNIS 698
Query: 597 SLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTM 656
++ +S+A+A QR GRAGR PG CY LY S + +PEI R L L +
Sbjct: 699 TMSAEWVSKANAKQRKGRAGRVQPGHCYHLYN-GLRASLLDDYQLPEILRTPLEELCLQI 757
Query: 657 KAMGINNLLSF--DFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLS 714
K + + + F +DPPS +A+ +++ L L ALD++ LT LG +A P++P +
Sbjct: 758 KILRLGGIAYFLSRLMDPPSDEAVSLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIG 817
Query: 715 KMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQP-EGDHLTLLAVY 773
KM+L C D +LTI A + F P ++ AD +R + + DHLT++ +
Sbjct: 818 KMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARRKELAKDTKSDHLTVVNAF 877
Query: 774 EAWK-AKN----FSLPWCGENFVNSRSLK 797
E W+ A+ + +C E F++S +L+
Sbjct: 878 EGWEEARRRGFRYEKDYCWEYFLSSNTLQ 906
Score = 402 (146.6 bits), Expect = 2.8e-78, Sum P(2) = 2.8e-78
Identities = 88/208 (42%), Positives = 130/208 (62%)
Query: 280 LSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGK--- 336
+ +Q R LP + ++ EL+ + ++QV ++ GETG GKTTQ+ Q++ + Y +GK
Sbjct: 312 IEMQHFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILD-DYIERGKGSA 370
Query: 337 --IGCTQPRRVAATSVAKRVAEEFG--CRLGEEVGYAIRFED-CTGPDTVIKYMTDGMLL 391
I CTQPRR++A SVA+RVA E C G GY IR + I Y T G++L
Sbjct: 371 CRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIIL 430
Query: 392 REILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSG 451
+ + D +LS S I+LDE HER + +DVL ++K L+ RPDL++I+ SATL+AE+FS
Sbjct: 431 QWLQSDSHLSSVSHIVLDEIHERNLQSDVLMTVIKDLLNFRPDLKVILMSATLNAEKFSE 490
Query: 452 YFFNCNIFSIPGRTFPVDINYSRQEVTD 479
YF NC + IPG TFPV + Y +++ +
Sbjct: 491 YFGNCPMIHIPGFTFPV-VEYLLEDIIE 517
Score = 46 (21.3 bits), Expect = 8.2e-41, Sum P(2) = 8.2e-41
Identities = 33/138 (23%), Positives = 55/138 (39%)
Query: 190 FKNPEGSLSRTAALQSALTKERREVREQQLRTMIDSIPKDLNRPWEDPMPETGERHLAQE 249
+ +G ++ A Q E RE+Q+ ++ S+ D E A E
Sbjct: 181 YAKKQGQKNKEAERQERAVVHMDERREEQIVQLLHSVQAK-----NDKDSEAQISWFAPE 235
Query: 250 LRGVGLSARDMP-EWKKNAYGKAFTFGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVL 308
G G ++P E K N+ K Q KL QE+R F+++++ I D++ L
Sbjct: 236 DHGYGT---EIPAENKPNSEKKLEN--QEKKLISQEKRT----FRIRDKYID--RDSEYL 284
Query: 309 ILIGETGSGKTTQLAQYL 326
+ E QL + L
Sbjct: 285 LQENEPDVALDQQLLEDL 302
Score = 39 (18.8 bits), Expect = 4.5e-40, Sum P(2) = 4.5e-40
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 391 LREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLI 438
+R+ ID + S+Y +L E +E + D LL+ L K++ DLR I
Sbjct: 272 IRDKYIDRD-SEY---LLQE-NEPDVALDQQ--LLEDLRKKKSDLRYI 312
>UNIPROTKB|E1C9G0 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 OMA:RAYKGWQ
EMBL:AADN02041257 EMBL:AADN02041258 EMBL:AADN02041259
EMBL:AADN02041260 IPI:IPI00679513 Ensembl:ENSGALT00000023376
Uniprot:E1C9G0
Length = 1380
Score = 470 (170.5 bits), Expect = 3.7e-78, Sum P(2) = 3.7e-78
Identities = 110/316 (34%), Positives = 172/316 (54%)
Query: 496 PEGDILLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPG 555
P G +L+FL G EI E L + VV P++S+L SE Q +F P G
Sbjct: 839 PPGAVLIFLPGLAEIKMLYEQLQSNALFNNRHSKRCVVYPLHSSLSSEEQQSVFLRPPAG 898
Query: 556 GRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRA 615
K++++TNIAE S+TID + YVID G K+ Y+P + ++SL T +S+A+ALQR GRA
Sbjct: 899 VIKIIISTNIAETSVTIDDVVYVIDSGKMKEKRYDPSKGMESLEDTFVSRANALQRKGRA 958
Query: 616 GRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMK------AMGINNLLSFDF 669
GR G C+ L++ Y ++ +PEIQR+ L L +K A ++++LS
Sbjct: 959 GRVASGVCFHLFSSHHYNHQLIKQQLPEIQRVPLEQLCLRIKILEMFSAQSLHSVLS-RL 1017
Query: 670 VDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEI 729
++PP ++L ++ +L LGAL + LT LG +A P+D + K++L C D
Sbjct: 1018 IEPPRTESLRASKLRLQDLGALTADEKLTPLGYHLASLPVDVRIGKLMLFGTIFRCLDPA 1077
Query: 730 LTIIAMIQTGHIFTRPRERQAKADEKRARFFQPEGDHLTLLAVYEAWK-----AKNFSLP 784
LTI A + F P +++ +A++K+ F D+L LL Y+ W+ S
Sbjct: 1078 LTIAASLAFKSPFVSPWDKREEANKKKLDFAVGNSDYLALLQAYKGWRLSTKEGSQASYN 1137
Query: 785 WCGENFVNSRSLKKTA 800
+C ENF++ R L++ A
Sbjct: 1138 YCRENFLSGRVLQEIA 1153
Score = 401 (146.2 bits), Expect = 3.7e-78, Sum P(2) = 3.7e-78
Identities = 86/193 (44%), Positives = 124/193 (64%)
Query: 281 SIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGY----TTKGK 336
S+ +R+ LP ++ + ++ + +QVL++ G TG GKTTQ+ Q++ +A
Sbjct: 529 SMLHERQKLPAWQERETILDLLTSHQVLVVSGMTGCGKTTQIPQFILDASLQGSPNAVAN 588
Query: 337 IGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILI 396
I CTQPRR++A SVA+RVA+E R+G VGY IR E T + Y T G+LLR +
Sbjct: 589 IICTQPRRISAISVAERVAKERTERVGVTVGYQIRLESVKSSATRLLYCTTGVLLRRLEG 648
Query: 397 DENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNC 456
D L + +++DE HERT +D L +LK ++ +RPDLR+I+ SATL+AE FS YF +C
Sbjct: 649 DLTLQGITHVIVDEVHERTEESDFLLLVLKDIMVQRPDLRIILMSATLNAELFSQYFHSC 708
Query: 457 NIFSIPGRTFPVD 469
I +IPGRTFPVD
Sbjct: 709 PIINIPGRTFPVD 721
Score = 43 (20.2 bits), Expect = 1.8e-40, Sum P(2) = 1.8e-40
Identities = 14/52 (26%), Positives = 23/52 (44%)
Query: 324 QYLAEAGYTTKGKIGCTQPRRVAATSVAKRVAEEF---GCRLGEEVGYAIRF 372
+YL +K K GC R AT +K + + + GC+ G + + F
Sbjct: 276 EYLTNRLSKSKQKGGCA---RDTATQNSKEICKFYLQGGCKFGSKCRFRHEF 324
Score = 38 (18.4 bits), Expect = 6.0e-40, Sum P(2) = 6.0e-40
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 208 TKERREVREQQLRTMIDSIPKDL 230
TK+ +V + RT + + +DL
Sbjct: 746 TKQENKVTARHKRTAFEEVEEDL 768
>UNIPROTKB|E2QX71 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940
SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026
OMA:RAYKGWQ EMBL:AAEX03010868 RefSeq:XP_540155.1
Ensembl:ENSCAFT00000010087 GeneID:483040 KEGG:cfa:483040
Uniprot:E2QX71
Length = 1382
Score = 459 (166.6 bits), Expect = 3.7e-78, Sum P(2) = 3.7e-78
Identities = 111/315 (35%), Positives = 170/315 (53%)
Query: 496 PEGDILLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPG 555
P G IL+FL G EI E L + VV P++S+L SE Q +F P G
Sbjct: 842 PPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVVHPLHSSLSSEEQQAVFVKPPVG 901
Query: 556 GRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRA 615
K++++TNIAE S+TID + YVID G K+ Y+ + ++SL T +SQA+ALQR GRA
Sbjct: 902 VTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRA 961
Query: 616 GRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGI---NNLLS-FD-FV 670
GR G C+ L+T + ++ +PEIQR+ L L +K + + +NL S F +
Sbjct: 962 GRVASGVCFHLFTSHHFNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFSRLI 1021
Query: 671 DPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEIL 730
+PP +L ++ +L LGAL + LT LG +A P+D + K++L C D L
Sbjct: 1022 EPPHTDSLRASKIRLRDLGALTPDEKLTPLGYHLASLPVDVRIGKLMLFGSIFRCLDPAL 1081
Query: 731 TIIAMIQTGHIFTRPRERQAKADEKRARFFQPEGDHLTLLAVYEAWKAK-----NFSLPW 785
TI A + F P +++ +A++K+ F D+L LL Y+ W+ S +
Sbjct: 1082 TIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSDYLALLRAYKGWQLSMKEGMRASYNY 1141
Query: 786 CGENFVNSRSLKKTA 800
C +NF++ R L++ A
Sbjct: 1142 CRQNFLSGRVLQEMA 1156
Score = 413 (150.4 bits), Expect = 3.7e-78, Sum P(2) = 3.7e-78
Identities = 104/259 (40%), Positives = 156/259 (60%)
Query: 224 DSIPKDLNRPWEDPMPETGERHLAQELRGVGLSARDMPEWK-KNAYG------KAFTFGQ 276
+S P++ E P P E L+ +S R +W+ K+ Y K F Q
Sbjct: 469 ESEPEEETDEDEGPAPVIVENESYVNLKKK-ISKRY--DWQAKSVYAENAKICKQFRIKQ 525
Query: 277 RSKL--SIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAE---AGY 331
S+ SI ++R+SLP ++ + +++ + ++QVL++ G TG GKTTQ+ Q++ + +G
Sbjct: 526 ASRQFQSILQERQSLPAWEERETILKLLSEHQVLVISGMTGCGKTTQIPQFILDDSLSGP 585
Query: 332 TTK-GKIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGML 390
K I CTQPRR++A SVA+RVA+E R+G VGY IR E T + Y T G+L
Sbjct: 586 PEKVANIICTQPRRISAISVAERVAKERTERVGLTVGYQIRLESVKSSATRLLYCTTGVL 645
Query: 391 LREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFS 450
LR + D +L + I++DE HERT +D L +LK +V +RP+L++I+ SATL+AE FS
Sbjct: 646 LRRLEGDTSLQGVTHIIVDEVHERTEESDFLLLVLKDIVLQRPNLQVILMSATLNAELFS 705
Query: 451 GYFFNCNIFSIPGRTFPVD 469
YF +C + +IPGRTFPVD
Sbjct: 706 EYFSSCPVITIPGRTFPVD 724
Score = 39 (18.8 bits), Expect = 8.5e-39, Sum P(2) = 8.5e-39
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 268 YGKAFTFGQRSK 279
YGKA TF + S+
Sbjct: 389 YGKALTFAETSE 400
>RGD|1308767 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10116 "Rattus norvegicus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009615 "response to virus" evidence=IEA;ISO]
[GO:0043330 "response to exogenous dsRNA" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308767 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
GeneTree:ENSGT00550000074257 CTD:170506 KO:K14442 OMA:RIRNRSY
OrthoDB:EOG4K6G3J EMBL:CH474003 IPI:IPI00367998
RefSeq:NP_001101148.1 UniGene:Rn.2744 Ensembl:ENSRNOT00000019824
GeneID:310461 KEGG:rno:310461 UCSC:RGD:1308767 NextBio:662035
Uniprot:D4A2Z8
Length = 1000
Score = 471 (170.9 bits), Expect = 3.7e-78, Sum P(2) = 3.7e-78
Identities = 112/329 (34%), Positives = 182/329 (55%)
Query: 479 DYLDSALITVL--QIHVDEPEGDILLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPV 536
D +D LI L I ++E +G IL+FL G + I + L ++ D +++P+
Sbjct: 460 DKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVM-FKSD--RFLIIPL 516
Query: 537 YSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLD 596
+S +P+ Q+++F+ PPG RK+V+ATNIAE S+TID + YVID G K+ ++ + +
Sbjct: 517 HSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNIS 576
Query: 597 SLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTM 656
++ +S+A+A QR GRAGR PG CY LY S + +PEI R L L +
Sbjct: 577 TMSAEWVSKANAKQRKGRAGRVQPGHCYHLYN-GLRASLLDDYQLPEILRTPLEELCLQI 635
Query: 657 KAMGINNLLSF--DFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLS 714
K + + + F +DPPS +A++ +++ L L ALD++ LT LG +A P++P +
Sbjct: 636 KILRLGGIAYFLSRLMDPPSDEAVVLSIKHLMELSALDKQEELTPLGVHLARLPVEPHIG 695
Query: 715 KMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFF-QPEGDHLTLLAVY 773
KM+L C D +LTI A + F P ++ AD +R + DHLT++ +
Sbjct: 696 KMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARRKELAKETRSDHLTVVNAF 755
Query: 774 EAWK-AKN----FSLPWCGENFVNSRSLK 797
E W+ AK + +C E F++S +L+
Sbjct: 756 EGWEEAKRRGFRYEKDYCWEYFLSSNTLQ 784
Score = 394 (143.8 bits), Expect = 3.7e-78, Sum P(2) = 3.7e-78
Identities = 86/208 (41%), Positives = 130/208 (62%)
Query: 280 LSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKG---- 335
+ +Q R+ LP + ++ EL+ ++++QV ++ GETG GKTTQ+ Q++ + Y +G
Sbjct: 190 IEMQRFRKKLPSYGMQKELVNLINNHQVTVISGETGCGKTTQVTQFILD-NYIERGIGSA 248
Query: 336 -KIGCTQPRRVAATSVAKRVAEEFG--CRLGEEVGYAIRFED-CTGPDTVIKYMTDGMLL 391
+I CTQPRR++A SVA+RVA E C G GY IR + I Y T G++L
Sbjct: 249 CRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIIL 308
Query: 392 REILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSG 451
+ + D LS S I+LDE HER + +DVL ++K L+ R DL++I+ SATL+AE+FS
Sbjct: 309 QWLQSDSRLSSVSHIVLDEIHERNLQSDVLMTVIKDLLHFRSDLKVILMSATLNAEKFSE 368
Query: 452 YFFNCNIFSIPGRTFPVDINYSRQEVTD 479
YF NC + IPG TFPV + Y +++ +
Sbjct: 369 YFGNCPMIHIPGFTFPV-VEYLLEDIIE 395
>UNIPROTKB|F5H3Y4 [details] [associations]
symbol:DHX37 "Probable ATP-dependent RNA helicase DHX37"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00217630 HGNC:HGNC:17210
EMBL:AC093719 ProteinModelPortal:F5H3Y4 SMR:F5H3Y4
Ensembl:ENST00000544745 ArrayExpress:F5H3Y4 Bgee:F5H3Y4
Uniprot:F5H3Y4
Length = 962
Score = 448 (162.8 bits), Expect = 6.8e-78, Sum P(2) = 6.8e-78
Identities = 106/250 (42%), Positives = 158/250 (63%)
Query: 282 IQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKI-GCT 340
+QE+R LPI + +++AV ++ ++I+ GETGSGKTTQ+ Q+L EAG++++ I G T
Sbjct: 32 MQEERLKLPILSEEQVIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGFSSEDSIIGVT 91
Query: 341 QPRRVAATSVAKRVAEEFGCRLGEEV-GYAIRFEDCTGPDTVIKYMTDGMLLREILIDEN 399
+PRRVAA ++++RVA+E L + V Y IR+E +T IK+MTDG+LL+EI D
Sbjct: 92 EPRRVAAVAMSQRVAKEMN--LSQRVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQKDFL 149
Query: 400 LSQYSVIMLDEAHERTINTDVLFGLLKQLV----KRRPDLRLIVTSATLDAERFSGYFFN 455
L +Y V+++DEAHER++ TD+L GLL ++V KR L+L++ SATL E F+ N
Sbjct: 150 LLRYKVVIIDEAHERSVYTDILIGLLSRIVTLRAKRNLPLKLLIMSATLRVEDFTQ---N 206
Query: 456 CNIFSIP-------GRTFPVDINYS-RQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQ 507
+F+ P R FPV ++++ R + DY V +IH P G IL+FLTGQ
Sbjct: 207 PRLFAKPPPVIKVESRQFPVTVHFNKRTPLEDYSGECFRKVCKIHRMLPAGGILVFLTGQ 266
Query: 508 EEIDFACESL 517
E+ C L
Sbjct: 267 AEVHALCRRL 276
Score = 416 (151.5 bits), Expect = 6.8e-78, Sum P(2) = 6.8e-78
Identities = 105/244 (43%), Positives = 141/244 (57%)
Query: 531 LVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYN 590
L VLP+YS L E Q+++F+P P G R VVATN+AE SLTI GI YV+D G K+ Y+
Sbjct: 375 LHVLPLYSLLAPEKQAQVFKPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRYYD 434
Query: 591 PKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRS-EMSPTTIPEIQRINL 649
+ S +T +SQASA QRAGRAGRT PG CYRLY+ + + E P PEI R +
Sbjct: 435 RVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFGDFEQFPP--PEITRRPV 492
Query: 650 VHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALD-----------EEGLL- 697
L MKA+ + +++F F PPS +AL++A E L +LGAL +E L
Sbjct: 493 EDLILQMKALNVEKVINFPFPTPPSVEALLAAEELLIALGALQPPQKAERVKQLQENRLS 552
Query: 698 ---TKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADE 754
T LG+ MA FP+ P +KML S GC +TI+A + +F +R A +DE
Sbjct: 553 CPITALGRTMATFPVAPRYAKMLALSRQHGCLPYAITIVASMTVRELFEE-LDRPAASDE 611
Query: 755 KRAR 758
+ R
Sbjct: 612 ELTR 615
Score = 40 (19.1 bits), Expect = 2.5e-38, Sum P(2) = 2.5e-38
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 752 ADEKRARFFQP--EGDHLTLLA 771
A EK+A+ F+P EG L ++A
Sbjct: 385 APEKQAQVFKPPPEGTRLCVVA 406
Score = 39 (18.8 bits), Expect = 1.4e-34, Sum P(2) = 1.4e-34
Identities = 13/34 (38%), Positives = 15/34 (44%)
Query: 393 EILIDENLSQYSVIMLDEAHE-RTINTDVLFGLL 425
E+L NL YSV+ E E R D G L
Sbjct: 317 EVLPQINLDHYSVLPAGEGDEDREAEVDEEEGAL 350
>UNIPROTKB|E7EWK3 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0009615 GO:GO:0003725
EMBL:AC018452 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
EMBL:AC134026 HGNC:HGNC:14410 IPI:IPI00945848
ProteinModelPortal:E7EWK3 SMR:E7EWK3 Ensembl:ENST00000481941
ArrayExpress:E7EWK3 Bgee:E7EWK3 Uniprot:E7EWK3
Length = 797
Score = 464 (168.4 bits), Expect = 8.3e-78, Sum P(2) = 8.3e-78
Identities = 111/329 (33%), Positives = 182/329 (55%)
Query: 479 DYLDSALITVL--QIHVDEPEGDILLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPV 536
D +D LI L I ++E +G IL+FL G + I + L ++ D + +++P+
Sbjct: 382 DKVDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVM-FKSD--KFLIIPL 438
Query: 537 YSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLD 596
+S +P+ Q+++F+ PPG RK+V+ATNIAE S+TID + YVID G K+ ++ + +
Sbjct: 439 HSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNIS 498
Query: 597 SLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTM 656
++ +S+A+A QR GRAGR PG CY LY S + +PEI R L L +
Sbjct: 499 TMSAEWVSKANAKQRKGRAGRVQPGHCYHLYN-GLRASLLDDYQLPEILRTPLEELCLQI 557
Query: 657 KAMGINNLLSF--DFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLS 714
K + + + F +DPPS +A++ ++ L L ALD++ LT LG +A P++P +
Sbjct: 558 KILRLGGIAYFLSRLMDPPSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIG 617
Query: 715 KMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQP-EGDHLTLLAVY 773
KM+L C D +LTI A + F P ++ AD +R + DHLT++ +
Sbjct: 618 KMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARRKELAKDTRSDHLTVVNAF 677
Query: 774 EAWK-AKN----FSLPWCGENFVNSRSLK 797
E W+ A+ + +C E F++S +L+
Sbjct: 678 EGWEEARRRGFRYEKDYCWEYFLSSNTLQ 706
Score = 392 (143.0 bits), Expect = 8.3e-78, Sum P(2) = 8.3e-78
Identities = 88/208 (42%), Positives = 128/208 (61%)
Query: 280 LSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGK--- 336
+ +Q R LP + ++ EL+ + ++QV ++ GETG GKTTQ+ Q++ + Y +GK
Sbjct: 112 IEMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILD-NYIERGKGSA 170
Query: 337 --IGCTQPRRVAATSVAKRVAEEFG--CRLGEEVGYAIRFED-CTGPDTVIKYMTDGMLL 391
I CTQPRR++A SVA+RVA E C G GY IR + I Y T G++L
Sbjct: 171 CRIVCTQPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIIL 230
Query: 392 REILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSG 451
+ + D LS S I+LDE HER + +DVL ++K L+ R DL++I+ SATL+AE+FS
Sbjct: 231 QWLQSDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATLNAEKFSE 290
Query: 452 YFFNCNIFSIPGRTFPVDINYSRQEVTD 479
YF NC + IPG TFPV + Y ++V +
Sbjct: 291 YFGNCPMIHIPGFTFPV-VEYLLEDVIE 317
>RGD|1306837 [details] [associations]
symbol:Dhx37 "DEAH (Asp-Glu-Ala-His) box polypeptide 37"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
RGD:1306837 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647
OMA:AKLQPRT OrthoDB:EOG4P2Q1J IPI:IPI00391385 RefSeq:NP_001099396.2
UniGene:Rn.24493 Ensembl:ENSRNOT00000030823 GeneID:288647
KEGG:rno:288647 UCSC:RGD:1306837 NextBio:628468 ArrayExpress:D4A1R0
Uniprot:D4A1R0
Length = 1150
Score = 454 (164.9 bits), Expect = 1.1e-77, Sum P(2) = 1.1e-77
Identities = 137/366 (37%), Positives = 198/366 (54%)
Query: 170 QPAFLQGQTRVSVDLSPVKVFKNPEGSLSRTAALQSALTKERREVREQQLRTMIDSIPKD 229
QPA QGQ +VS LS ++ S + +++ E EV Q RT S D
Sbjct: 134 QPA-AQGQEKVS-SLSGAHRKRHRSSSTEEDS--EASEDSEPEEVTADQPRT---STGAD 186
Query: 230 LNRPWEDPMPETGERHL---AQELRGVGLSARDMPEWKKNA----YGKAFTFGQRSKL-S 281
L P P P T E + G SA PE +A K F ++
Sbjct: 187 LVHP---P-PATSEIKSPVPTPQPPPPGTSAP--PETPASAPPPALAKPAVFIPVNRTPE 240
Query: 282 IQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKI-GCT 340
+QE+R LPI + +++AV ++ ++I+ GETGSGKTTQ+ Q+L EAGY+++ I G T
Sbjct: 241 MQEERLKLPILAEEQAIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGYSSEDSIIGVT 300
Query: 341 QPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENL 400
+PRRVAA ++++RVA+E V Y IR+E +T IK+MTDG+LL+EI D L
Sbjct: 301 EPRRVAAVAMSQRVAKEMNLS-HRVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQKDFLL 359
Query: 401 SQYSVIMLDEAHERTINTDVLFGLLKQLV----KRRPDLRLIVTSATLDAERFSGY--FF 454
+Y V+++DEAHER++ TD+L GLL ++V KR L+L++ SATL E F+ F
Sbjct: 360 LKYKVVIIDEAHERSVYTDILLGLLSRIVALRAKRHLPLKLLIMSATLRVEDFTQNQRLF 419
Query: 455 NCN--IFSIPGRTFPVDINYS-RQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEID 511
+ + R FPV ++++ R + DY V +IH P G IL+FLTGQ E+
Sbjct: 420 TTPPPVIKVESRQFPVTVHFNKRTPLDDYSGECFRKVCKIHRMLPAGGILVFLTGQAEVH 479
Query: 512 FACESL 517
C L
Sbjct: 480 ALCRRL 485
Score = 411 (149.7 bits), Expect = 1.1e-77, Sum P(2) = 1.1e-77
Identities = 106/269 (39%), Positives = 149/269 (55%)
Query: 531 LVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYN 590
L VLP+YS L E Q+++F+P P G R V+ATN+AE SLTI GI YV+D G K+ Y+
Sbjct: 581 LHVLPLYSLLAPEKQAQVFKPPPEGTRLCVIATNVAETSLTIPGIKYVVDCGKVKKRYYD 640
Query: 591 PKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRS-EMSPTTIPEIQRINL 649
+ S +T +SQASA QRAGRAGRT PG CYRLY+ + + E P PEI R +
Sbjct: 641 RVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFGDFEQFPP--PEITRRPV 698
Query: 650 VHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALD----EEGL--------- 696
L MKA+ I +++F F PPS +ALI+A E L +LGAL +E +
Sbjct: 699 EDLILQMKALNIEKVINFPFPTPPSVEALIAAEELLIALGALQAPPKQERMKKLQMSQLS 758
Query: 697 --LTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADE 754
+T LG+ M+ FP+ P +KML S GC + I+A + +F +R A ++E
Sbjct: 759 CPITALGRTMSTFPVAPRYAKMLALSQQHGCLPYTIAIVAAMTVRELFEE-LDRPAASEE 817
Query: 755 KRARFFQPEGDHLTLLAVYEAWKAKNFSL 783
+ A +G + + W + SL
Sbjct: 818 ELAEL---KGRRTRVAQMKRTWAGQGASL 843
>UNIPROTKB|E2RHZ3 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647 OMA:AKLQPRT
EMBL:AAEX03014623 RefSeq:XP_534640.2 Ensembl:ENSCAFT00000011159
GeneID:477442 KEGG:cfa:477442 NextBio:20852918 Uniprot:E2RHZ3
Length = 1149
Score = 449 (163.1 bits), Expect = 1.2e-77, Sum P(2) = 1.2e-77
Identities = 105/247 (42%), Positives = 155/247 (62%)
Query: 282 IQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKI-GCT 340
+QE+R LPI + +++AV ++ ++I+ GETGSGKTTQ+ Q+L EAGY++ I G T
Sbjct: 239 MQEERLKLPILAEEQVIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGYSSDNSIIGIT 298
Query: 341 QPRRVAATSVAKRVAEEFGCRLGEEV-GYAIRFEDCTGPDTVIKYMTDGMLLREILIDEN 399
+PRRVAA ++++RVA+E L + V Y IR+E +T IK+MTDG+LL+EI D
Sbjct: 299 EPRRVAAVAMSQRVAKEMN--LSQRVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQKDFL 356
Query: 400 LSQYSVIMLDEAHERTINTDVLFGLLKQLV----KRRPDLRLIVTSATLDAERFSGY--F 453
L +Y V+++DEAHER++ TD+L GLL ++V KR L+L++ SATL E F+
Sbjct: 357 LLRYKVVLIDEAHERSVYTDILIGLLSRIVSLRAKRHLPLKLLIMSATLRVEDFTQNQRL 416
Query: 454 FNCN--IFSIPGRTFPVDINYS-RQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEI 510
F + + R FPV ++++ R + DY V +IH P G IL+FLTGQ E+
Sbjct: 417 FPQPPPVIKVESRQFPVTVHFNKRTPLEDYSGECFRKVCKIHRMLPAGGILVFLTGQAEV 476
Query: 511 DFACESL 517
C L
Sbjct: 477 HALCRRL 483
Score = 416 (151.5 bits), Expect = 1.2e-77, Sum P(2) = 1.2e-77
Identities = 104/240 (43%), Positives = 140/240 (58%)
Query: 531 LVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYN 590
L VLP+YS L E Q+++F+P P G R VVATN+AE SLTI GI YV+D G K+ Y+
Sbjct: 582 LHVLPLYSLLAPEKQAQVFQPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRHYD 641
Query: 591 PKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLV 650
+ S +T +SQASA QRAGRAGRT PG CYRLY+ + + S+ PEI R +
Sbjct: 642 RVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVF-SDFEQFPPPEITRRPVE 700
Query: 651 HTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDE----EGL---------- 696
L MKA+ I +++F F PPS +ALI+A E L +LGAL E +
Sbjct: 701 DLILQMKALNIEKVINFPFPTPPSVEALIAAEELLIALGALQAPQKTESVKQLQRSWLGC 760
Query: 697 -LTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEK 755
+T LG+ MA FP+ P +KML S GC +TI+A + +F +R A +DE+
Sbjct: 761 PITALGRTMATFPVAPRYAKMLALSRQHGCLPYAITIVAAMTVRELFEE-LDRPAASDEE 819
Score = 44 (20.5 bits), Expect = 1.7e-38, Sum P(2) = 1.7e-38
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 752 ADEKRARFFQP--EGDHLTLLA 771
A EK+A+ FQP EG L ++A
Sbjct: 592 APEKQAQVFQPPPEGTRLCVVA 613
>UNIPROTKB|Q8IY37 [details] [associations]
symbol:DHX37 "Probable ATP-dependent RNA helicase DHX37"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000201240 KO:K14780 EMBL:BC002575 EMBL:BC037964
EMBL:AB040950 IPI:IPI00217630 RefSeq:NP_116045.2 UniGene:Hs.107382
ProteinModelPortal:Q8IY37 SMR:Q8IY37 IntAct:Q8IY37 STRING:Q8IY37
PhosphoSite:Q8IY37 DMDM:38257651 PaxDb:Q8IY37 PRIDE:Q8IY37
Ensembl:ENST00000308736 GeneID:57647 KEGG:hsa:57647 UCSC:uc001ugy.3
CTD:57647 GeneCards:GC12M125431 HGNC:HGNC:17210 HPA:HPA047607
neXtProt:NX_Q8IY37 PharmGKB:PA27224 HOVERGEN:HBG051356
InParanoid:Q8IY37 OMA:AKLQPRT OrthoDB:EOG4P2Q1J PhylomeDB:Q8IY37
GenomeRNAi:57647 NextBio:64382 ArrayExpress:Q8IY37 Bgee:Q8IY37
CleanEx:HS_DHX37 Genevestigator:Q8IY37 GermOnline:ENSG00000150990
Uniprot:Q8IY37
Length = 1157
Score = 448 (162.8 bits), Expect = 1.6e-77, Sum P(2) = 1.6e-77
Identities = 106/250 (42%), Positives = 158/250 (63%)
Query: 282 IQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKI-GCT 340
+QE+R LPI + +++AV ++ ++I+ GETGSGKTTQ+ Q+L EAG++++ I G T
Sbjct: 245 MQEERLKLPILSEEQVIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGFSSEDSIIGVT 304
Query: 341 QPRRVAATSVAKRVAEEFGCRLGEEV-GYAIRFEDCTGPDTVIKYMTDGMLLREILIDEN 399
+PRRVAA ++++RVA+E L + V Y IR+E +T IK+MTDG+LL+EI D
Sbjct: 305 EPRRVAAVAMSQRVAKEMN--LSQRVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQKDFL 362
Query: 400 LSQYSVIMLDEAHERTINTDVLFGLLKQLV----KRRPDLRLIVTSATLDAERFSGYFFN 455
L +Y V+++DEAHER++ TD+L GLL ++V KR L+L++ SATL E F+ N
Sbjct: 363 LLRYKVVIIDEAHERSVYTDILIGLLSRIVTLRAKRNLPLKLLIMSATLRVEDFTQ---N 419
Query: 456 CNIFSIP-------GRTFPVDINYS-RQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQ 507
+F+ P R FPV ++++ R + DY V +IH P G IL+FLTGQ
Sbjct: 420 PRLFAKPPPVIKVESRQFPVTVHFNKRTPLEDYSGECFRKVCKIHRMLPAGGILVFLTGQ 479
Query: 508 EEIDFACESL 517
E+ C L
Sbjct: 480 AEVHALCRRL 489
Score = 416 (151.5 bits), Expect = 1.6e-77, Sum P(2) = 1.6e-77
Identities = 105/244 (43%), Positives = 141/244 (57%)
Query: 531 LVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYN 590
L VLP+YS L E Q+++F+P P G R VVATN+AE SLTI GI YV+D G K+ Y+
Sbjct: 588 LHVLPLYSLLAPEKQAQVFKPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRYYD 647
Query: 591 PKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRS-EMSPTTIPEIQRINL 649
+ S +T +SQASA QRAGRAGRT PG CYRLY+ + + E P PEI R +
Sbjct: 648 RVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFGDFEQFPP--PEITRRPV 705
Query: 650 VHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALD-----------EEGLL- 697
L MKA+ + +++F F PPS +AL++A E L +LGAL +E L
Sbjct: 706 EDLILQMKALNVEKVINFPFPTPPSVEALLAAEELLIALGALQPPQKAERVKQLQENRLS 765
Query: 698 ---TKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADE 754
T LG+ MA FP+ P +KML S GC +TI+A + +F +R A +DE
Sbjct: 766 CPITALGRTMATFPVAPRYAKMLALSRQHGCLPYAITIVASMTVRELFEE-LDRPAASDE 824
Query: 755 KRAR 758
+ R
Sbjct: 825 ELTR 828
Score = 40 (19.1 bits), Expect = 6.0e-38, Sum P(2) = 6.0e-38
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 752 ADEKRARFFQP--EGDHLTLLA 771
A EK+A+ F+P EG L ++A
Sbjct: 598 APEKQAQVFKPPPEGTRLCVVA 619
Score = 39 (18.8 bits), Expect = 3.2e-34, Sum P(2) = 3.2e-34
Identities = 13/34 (38%), Positives = 15/34 (44%)
Query: 393 EILIDENLSQYSVIMLDEAHE-RTINTDVLFGLL 425
E+L NL YSV+ E E R D G L
Sbjct: 530 EVLPQINLDHYSVLPAGEGDEDREAEVDEEEGAL 563
>ZFIN|ZDB-GENE-030131-4505 [details] [associations]
symbol:dhx37 "DEAH (Asp-Glu-Ala-His) box
polypeptide 37" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-030131-4505 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074985 KO:K14780
CTD:57647 HOVERGEN:HBG051356 OMA:AKLQPRT EMBL:CABZ01014508
EMBL:CABZ01038687 EMBL:CABZ01038688 EMBL:CABZ01038689
EMBL:CABZ01038690 EMBL:CABZ01038691 EMBL:CABZ01038692
EMBL:CABZ01038693 EMBL:CABZ01038694 EMBL:CABZ01038695
EMBL:CABZ01038696 EMBL:CU469504 EMBL:FP085395 IPI:IPI00488738
RefSeq:NP_001076473.2 UniGene:Dr.79711 Ensembl:ENSDART00000090731
Ensembl:ENSDART00000127153 GeneID:100009635 KEGG:dre:100009635
NextBio:20787816 Uniprot:B8JLP0
Length = 1152
Score = 451 (163.8 bits), Expect = 2.6e-77, Sum P(3) = 2.6e-77
Identities = 109/249 (43%), Positives = 152/249 (61%)
Query: 282 IQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKI-GCT 340
IQE R LP+ + +++AV D++ ++L GETGSGKTTQ+ Q+L EAG+ + G I G T
Sbjct: 245 IQEARLRLPVLAEEQIIMEAVKDHECVVLCGETGSGKTTQVPQFLYEAGFASSGGIIGVT 304
Query: 341 QPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENL 400
+PRRVAA S++ RVA E G V Y IR+E +T IK MTDG+LL+EI D L
Sbjct: 305 EPRRVAAISMSHRVATEMNLSSGV-VSYQIRYEGNVTENTKIKVMTDGVLLKEIQRDFLL 363
Query: 401 SQYSVIMLDEAHERTINTDVLFGLLKQLV----KRRPDLRLIVTSATLDAERFSGYFFNC 456
+YSVI++DEAHER++ TD+L GLL ++V K+ ++LI+ SATL E F+ N
Sbjct: 364 QKYSVIIIDEAHERSVYTDILIGLLSRIVPLRNKKGLPMKLIIMSATLRVEDFTE---NK 420
Query: 457 NIFSIP-------GRTFPVDINYS-RQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQE 508
+FS P R F V ++++ R + DY + +IH P G IL+FLTGQ
Sbjct: 421 RLFSSPPPVIKVEARQFAVTVHFNKRTPMDDYTGETFRKICKIHRMLPPGGILVFLTGQA 480
Query: 509 EIDFACESL 517
E+ C L
Sbjct: 481 EVHSVCRRL 489
Score = 419 (152.6 bits), Expect = 2.6e-77, Sum P(3) = 2.6e-77
Identities = 108/271 (39%), Positives = 150/271 (55%)
Query: 528 VPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQN 587
+P L VLP+YS L E Q+++F P P G R VVATN+AE SLTI GI YV+D G K+
Sbjct: 578 IP-LYVLPLYSLLAPEQQAKVFRPPPAGSRLCVVATNVAETSLTIPGIKYVVDCGRVKKR 636
Query: 588 VYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRI 647
Y+ + S +T ISQASA QRAGRAGRT PG CYRLY+ + + + S + EI R
Sbjct: 637 FYDRVTGVSSFKVTWISQASANQRAGRAGRTEPGHCYRLYSSAVF-GDFSLFSEAEITRR 695
Query: 648 NLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDE---EGLLTK----- 699
+ L MK + I +++F F PPS +ALI+A E L SLGAL++ G L++
Sbjct: 696 PVEDLVLQMKDLNIEKVVNFPFPTPPSSEALIAAEELLISLGALEKPARHGRLSEMEKAR 755
Query: 700 -------LGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKA 752
LG+ MA FP+ P +KML GC I+TI++ + IF +R A +
Sbjct: 756 LSCPISPLGRAMAAFPVAPRYAKMLALGRQQGCMQYIITIVSAMTVREIF-EDYDRPAGS 814
Query: 753 DEKRARFFQPEGDHLTLLAVYEAWKAKNFSL 783
+E+ + G + + W + SL
Sbjct: 815 EEENVKM---SGKKARSVQMRRLWAGQGASL 842
Score = 43 (20.2 bits), Expect = 5.2e-38, Sum P(3) = 5.2e-38
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 585 KQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPG 621
K+NV P+ LD+ P+ + ++AG G G
Sbjct: 519 KKNVSLPRINLDNYSALPVDEGDEDRQAGIDEDDGEG 555
Score = 37 (18.1 bits), Expect = 2.6e-77, Sum P(3) = 2.6e-77
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 195 GSLS-RTAALQSALTKERREVREQQ 218
GS S + ++L A K RRE E++
Sbjct: 138 GSSSVKISSLSGANRKRRREADEEE 162
Score = 37 (18.1 bits), Expect = 1.2e-33, Sum P(3) = 1.2e-33
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 399 NLSQYSVIMLDEAHE 413
NL YS + +DE E
Sbjct: 528 NLDNYSALPVDEGDE 542
>FB|FBgn0001330 [details] [associations]
symbol:kz "kurz" species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS;NAS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0022008 EMBL:AE014298
GO:GO:0003723 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AL009195 GeneTree:ENSGT00550000074985 KO:K14780
OMA:AKLQPRT EMBL:X64418 PIR:T13424 RefSeq:NP_476591.1 UniGene:Dm.33
ProteinModelPortal:O46072 SMR:O46072 STRING:O46072 PaxDb:O46072
PRIDE:O46072 EnsemblMetazoa:FBtr0070419 GeneID:31205
KEGG:dme:Dmel_CG3228 UCSC:CG3228-RA CTD:31205 FlyBase:FBgn0001330
InParanoid:O46072 OrthoDB:EOG4SN03P PhylomeDB:O46072
GenomeRNAi:31205 NextBio:772445 Bgee:O46072 GermOnline:CG3228
Uniprot:O46072
Length = 1192
Score = 505 (182.8 bits), Expect = 3.0e-77, Sum P(2) = 3.0e-77
Identities = 116/242 (47%), Positives = 158/242 (65%)
Query: 282 IQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCTQ 341
+Q R LPI + ++++ +++N ++I+ GETGSGKTTQL Q+L EAGY IG T+
Sbjct: 253 VQNARLRLPILAEEQQVMETINENPIVIVAGETGSGKTTQLPQFLYEAGYAQHKMIGVTE 312
Query: 342 PRRVAATSVAKRVAEEFGCRLGE-EVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENL 400
PRRVAA +++KRVA E L E EV Y IRFE P T IK+MTDG+LL+EI D L
Sbjct: 313 PRRVAAIAMSKRVAHEMN--LPESEVSYLIRFEGNVTPATRIKFMTDGVLLKEIETDFLL 370
Query: 401 SQYSVIMLDEAHERTINTDVLFGLLKQLV----KRRPDLRLIVTSATLDAERFSGYFFNC 456
S+YSVI+LDEAHER++ TD+L GLL ++V KR L+LI+ SATL R S + N
Sbjct: 371 SKYSVIILDEAHERSVYTDILVGLLSRIVPLRHKRGQPLKLIIMSATL---RVSDFTENT 427
Query: 457 NIFSIP-------GRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEE 509
+F IP R FPV I++ ++ DY+ A L+IH PEG IL+F+TGQ+E
Sbjct: 428 RLFKIPPPLLKVEARQFPVTIHFQKRTPDDYVAEAYRKTLKIHNKLPEGGILIFVTGQQE 487
Query: 510 ID 511
++
Sbjct: 488 VN 489
Score = 351 (128.6 bits), Expect = 3.0e-77, Sum P(2) = 3.0e-77
Identities = 87/204 (42%), Positives = 116/204 (56%)
Query: 525 GKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFA 584
G+ P L VLP+YS L SE Q+RIF P P G R VV+TN+AE SLTI I YV+D G
Sbjct: 612 GQRQP-LWVLPLYSLLSSEKQNRIFLPVPDGCRLCVVSTNVAETSLTIPHIKYVVDCGRQ 670
Query: 585 KQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEI 644
K +Y+ + + V+T S+ASA QRAGRAGR G CYRLY+ + Y + P+I
Sbjct: 671 KTRLYDKLTGVSAFVVTYTSKASADQRAGRAGRISAGHCYRLYSSAVYNDCFEDFSQPDI 730
Query: 645 QRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGAL--------DEEGL 696
Q+ + L M+ MGI+ ++ F F PP L +A +L LGAL D
Sbjct: 731 QKKPVEDLMLQMRCMGIDRVVHFPFPSPPDQVQLQAAERRLIVLGALEVAKTENTDLPPA 790
Query: 697 LTKLGKKMAEFPLDPPLSKMLLAS 720
+T+LG ++ FP+ P KML S
Sbjct: 791 VTRLGHVISRFPVAPRFGKMLALS 814
>MGI|MGI:2136388 [details] [associations]
symbol:Dqx1 "DEAQ RNA-dependent ATPase" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006200 "ATP catabolic
process" evidence=ISA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISA]
InterPro:IPR001650 InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194
SMART:SM00847 MGI:MGI:2136388 GO:GO:0005524 GO:GO:0005634
GO:GO:0003676 GO:GO:0016887 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 CTD:165545 KO:K14433 OMA:CGQAVQA
OrthoDB:EOG4548Z3 EMBL:AF318278 EMBL:BC048936 EMBL:BC075680
IPI:IPI00125675 IPI:IPI00844713 RefSeq:NP_291084.1
UniGene:Mm.140332 ProteinModelPortal:Q924H9 SMR:Q924H9
PhosphoSite:Q924H9 PRIDE:Q924H9 Ensembl:ENSMUST00000077502
GeneID:93838 KEGG:mmu:93838 UCSC:uc009cmc.1 UCSC:uc009cmd.1
InParanoid:Q924H9 NextBio:351693 Bgee:Q924H9 CleanEx:MM_DQX1
Genevestigator:Q924H9 Uniprot:Q924H9
Length = 718
Score = 776 (278.2 bits), Expect = 4.3e-77, P = 4.3e-77
Identities = 189/524 (36%), Positives = 294/524 (56%)
Query: 284 EQRRSLPIFKLKNELIQAVHDNQ--VLILIGETGSGKTTQLAQYLAE----AGYTTKGKI 337
EQRR+LPI+ + ++ + + V+++ G+ GSGK+TQ+ Q+ AE G+ T G++
Sbjct: 37 EQRRALPIWAARFLFLEHLESSPTGVVLVSGDPGSGKSTQIPQWCAEFALARGFQT-GQV 95
Query: 338 GCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILID 397
TQP +AA S+A RVA+E LG E+GY+I EDCTGP+T++++ D + L+E+
Sbjct: 96 TVTQPYPLAAMSLASRVADEMDLTLGHEIGYSIPQEDCTGPNTMLRFCWDRLFLQEVAST 155
Query: 398 ENLSQYSVIMLDEAHERTINTDVLFGLLKQL-VKRRP-DLRLIVTSATLDAERFSGYFFN 455
+SV++LDEA ER++ +D+L GLL+ ++ P D R++V + +F ++ N
Sbjct: 156 RGPGAWSVLILDEAQERSVASDLLQGLLRDTRLRNLPGDPRVVVVTDPALEPKFQAFWGN 215
Query: 456 CNIFSIPGRTF--PVDINYSRQEVTDYLDSALITVLQI-HVDEPEGDILLFLTGQEEIDF 512
I +P P + Y TD +++A VL++ +E GD+L++L +EEI
Sbjct: 216 SPIVRVPREPGGDPT-LAYKDTVPTDLVEAACQAVLELCQQEEAPGDVLVYLPSEEEISL 274
Query: 513 ACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTI 572
CESL ++ L P VLP++ IQ+ ++E RK+VV +A+ S ++
Sbjct: 275 CCESLSGEMGTLAVPGPPPRVLPLHPGCAQAIQT-VYEDTDVSVRKIVVTHWLADFSFSL 333
Query: 573 DGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAY 632
I +VID G ++VYNP+ R +S V+ PIS+ A R RA PG C RLY++S
Sbjct: 334 PSIQHVIDSGLELRSVYNPRIRAESQVLRPISKCQAEARLLRAKGFPPGSCLRLYSKSTL 393
Query: 633 RSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALD 692
E P P++ NL L + I F+D P+P+AL+ A+E L L AL+
Sbjct: 394 ELEAPPLPHPKVCEENLSSLVLLLMRKQIAEPGECHFLDRPAPEALMRALEDLDYLAALN 453
Query: 693 EEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKA 752
++G L+ LG ++EFPL P L+K LLAS + C DE+LT+ AM+ FTRP +A
Sbjct: 454 DDGELSDLGVILSEFPLPPELAKALLASCEFNCVDEMLTLAAMLTAAPGFTRPPLSAGEA 513
Query: 753 DEKRARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSL 796
+RA +GDH +L+ VYEA+ WC +N SL
Sbjct: 514 ALRRA-LEHADGDHSSLIQVYEAFVQSGADEAWCQARGLNWESL 556
>ZFIN|ZDB-GENE-080507-1 [details] [associations]
symbol:dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide
40" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-080507-1 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104421
EMBL:CR848791 EMBL:CU861501 IPI:IPI00507978
Ensembl:ENSDART00000101707 Uniprot:E7F7R7
Length = 734
Score = 774 (277.5 bits), Expect = 7.1e-77, P = 7.1e-77
Identities = 163/392 (41%), Positives = 245/392 (62%)
Query: 424 LLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPVDINYSR------QEV 477
LLK + L+++V SATL+ E+ S ++ NC +F+IPGRT+PV + +E
Sbjct: 158 LLKGSRGNKTPLKVVVMSATLETEKLSSFYGNCPVFTIPGRTYPVKETFCNLIGPKDKES 217
Query: 478 TDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEKIKALG-------KDVPE 530
+ Y+ + L +H +E GDIL+FLTGQ EI+ AC+ L EK + L + V
Sbjct: 218 SVYVKEVVKMTLDVHTNEAAGDILVFLTGQSEIEKACDLLFEKAEILDYRYDVHDRSVDG 277
Query: 531 LVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYN 590
L++L +Y ++P++ Q +IF+PAP G RK VVATNIA SLTIDGI Y++D GF KQ +N
Sbjct: 278 LLILSLYGSMPTDQQRQIFQPAPKGVRKCVVATNIAATSLTIDGIRYIVDSGFVKQLNHN 337
Query: 591 PKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLV 650
+ LD L + PIS++ A QRAGRAGRT GKC+R+Y++ + + M TIPEIQR +L
Sbjct: 338 SRVGLDILEVVPISKSEAQQRAGRAGRTAAGKCFRIYSKDFWDTCMPEYTIPEIQRTSLT 397
Query: 651 HTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLD 710
LT+K +G+++++ F ++D P + +++A++QLY A+D G +TKLG+ M EFPL
Sbjct: 398 SVILTLKCLGVHDVIRFPYLDCPEERFILTALKQLYQYDAIDRRGEVTKLGRLMVEFPLP 457
Query: 711 PPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPR--ERQAKADEKRARFFQPEG---D 765
P L++ LL + LGC D +L + AM+ +IF RP E+Q +A+ + G D
Sbjct: 458 PNLTRALLKAAALGCEDIMLPVAAMLSVENIFIRPGKPEKQKEAEVRHKEIAACSGGSND 517
Query: 766 HLTLLAVYEAWKAKNFSLPWCGENFVNSRSLK 797
L LL V+E +A WC EN+++ R++K
Sbjct: 518 FLMLLCVFEKCRASENPSAWCKENWIHWRAVK 549
Score = 669 (240.6 bits), Expect = 9.4e-66, P = 9.4e-66
Identities = 135/260 (51%), Positives = 187/260 (71%)
Query: 276 QRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKG 335
+RS + + + LPI++ K++L+QAV +N LI+ GETGSGKTTQL QYL +AG + G
Sbjct: 5 KRSSETEHHESKKLPIYQYKDKLVQAVEENTFLIVTGETGSGKTTQLPQYLYKAGLSRNG 64
Query: 336 KIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREIL 395
+IG TQPRRVAA +VA+RV+ E RLGEEVGY +RF+DC+ DT+IKYMTDG LLREIL
Sbjct: 65 RIGVTQPRRVAAITVAQRVSSEMQVRLGEEVGYQVRFDDCSTKDTMIKYMTDGCLLREIL 124
Query: 396 IDENLSQYSVIMLDEAHERTINTDVLFGLLKQ-LVK----RRPDLRLIVTSATLDAERFS 450
D +L+QYS+++LDEAHER++NTDVL GLLK+ L+K + L+++V SATL+ E+ S
Sbjct: 125 ADPSLTQYSIVILDEAHERSLNTDVLLGLLKKTLLKGSRGNKTPLKVVVMSATLETEKLS 184
Query: 451 GYFFNCNIFSIPGRTFPVDINYSR------QEVTDYLDSALITVLQIHVDEPEGDILLFL 504
++ NC +F+IPGRT+PV + +E + Y+ + L +H +E GDIL+FL
Sbjct: 185 SFYGNCPVFTIPGRTYPVKETFCNLIGPKDKESSVYVKEVVKMTLDVHTNEAAGDILVFL 244
Query: 505 TGQEEIDFACESLCEKIKAL 524
TGQ EI+ AC+ L EK + L
Sbjct: 245 TGQSEIEKACDLLFEKAEIL 264
>UNIPROTKB|Q6P158 [details] [associations]
symbol:DHX57 "Putative ATP-dependent RNA helicase DHX57"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR009060 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS00690 PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
EMBL:AC018693 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AK057423 EMBL:BC053623 EMBL:BC060778
EMBL:BC065278 EMBL:BC131534 EMBL:AF283512 IPI:IPI00168885
IPI:IPI00399364 IPI:IPI00749029 RefSeq:NP_945314.1
UniGene:Hs.468226 ProteinModelPortal:Q6P158 SMR:Q6P158
IntAct:Q6P158 STRING:Q6P158 PhosphoSite:Q6P158 DMDM:94710252
PaxDb:Q6P158 PeptideAtlas:Q6P158 PRIDE:Q6P158
Ensembl:ENST00000295373 GeneID:90957 KEGG:hsa:90957 UCSC:uc002rre.3
UCSC:uc002rrg.3 CTD:90957 GeneCards:GC02M039025 HGNC:HGNC:20086
HPA:HPA036160 neXtProt:NX_Q6P158 PharmGKB:PA134919698
HOVERGEN:HBG080658 InParanoid:Q6P158 KO:K13026 OMA:RAYKGWQ
OrthoDB:EOG4ZS929 PhylomeDB:Q6P158 ChiTaRS:DHX57 GenomeRNAi:90957
NextBio:77048 ArrayExpress:Q6P158 Bgee:Q6P158 CleanEx:HS_DHX57
Genevestigator:Q6P158 GermOnline:ENSG00000163214 Uniprot:Q6P158
Length = 1386
Score = 463 (168.0 bits), Expect = 8.5e-77, Sum P(3) = 8.5e-77
Identities = 111/315 (35%), Positives = 170/315 (53%)
Query: 496 PEGDILLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPG 555
P G IL+FL G EI E L + V+ P++S+L SE Q +F P G
Sbjct: 846 PPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPAG 905
Query: 556 GRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRA 615
K++++TNIAE S+TID + YVID G K+ Y+ + ++SL T +SQA+ALQR GRA
Sbjct: 906 VTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRA 965
Query: 616 GRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGI---NNLLS-FD-FV 670
GR G C+ L+T Y ++ +PEIQR+ L L +K + + +NL S F +
Sbjct: 966 GRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSAHNLQSVFSRLI 1025
Query: 671 DPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEIL 730
+PP +L ++ +L LGAL + LT LG +A P+D + K++L C D L
Sbjct: 1026 EPPHTDSLRASKIRLRDLGALTPDERLTPLGYHLASLPVDVRIGKLMLFGSIFRCLDPAL 1085
Query: 731 TIIAMIQTGHIFTRPRERQAKADEKRARFFQPEGDHLTLLAVYEAWKAKN-----FSLPW 785
TI A + F P +++ +A++K+ F D+L LL Y+ W+ S +
Sbjct: 1086 TIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSDYLALLQAYKGWQLSTKEGVRASYNY 1145
Query: 786 CGENFVNSRSLKKTA 800
C +NF++ R L++ A
Sbjct: 1146 CRQNFLSGRVLQEMA 1160
Score = 405 (147.6 bits), Expect = 8.5e-77, Sum P(3) = 8.5e-77
Identities = 92/206 (44%), Positives = 131/206 (63%)
Query: 270 KAFTFGQRSKL--SIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLA 327
K F Q S+ SI ++R+SLP ++ + ++ + +QV+++ G TG GKTTQ+ Q++
Sbjct: 523 KQFRMKQASRQFQSILQERQSLPAWEERETILNLLRKHQVVVISGMTGCGKTTQIPQFIL 582
Query: 328 EA---GYTTK-GKIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIK 383
+ G K I CTQPRR++A SVA+RVA+E R+G VGY IR E T +
Sbjct: 583 DDSLNGPPEKVANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLL 642
Query: 384 YMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSAT 443
Y T G+LLR + D L S I++DE HERT +D L +LK +V +RP L++I+ SAT
Sbjct: 643 YCTTGVLLRRLEGDTALQGVSHIIVDEVHERTEESDFLLLVLKDIVSQRPGLQVILMSAT 702
Query: 444 LDAERFSGYFFNCNIFSIPGRTFPVD 469
L+AE FS YF +C + +IPGRTFPVD
Sbjct: 703 LNAELFSDYFNSCPVITIPGRTFPVD 728
Score = 37 (18.1 bits), Expect = 8.5e-77, Sum P(3) = 8.5e-77
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 84 LQSKKKSGRDRKTNYKAEFENDRERSGRYCK 114
L+ + + R RK+ K +N +E S CK
Sbjct: 276 LELEYLTSRFRKSKPKESTKNVQENSLEICK 306
>UNIPROTKB|E1C550 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 GeneTree:ENSGT00550000074257
OMA:GRIAYND EMBL:AADN02021100 IPI:IPI00601151
Ensembl:ENSGALT00000016841 Uniprot:E1C550
Length = 985
Score = 458 (166.3 bits), Expect = 1.1e-76, Sum P(2) = 1.1e-76
Identities = 109/329 (33%), Positives = 177/329 (53%)
Query: 479 DYLDSALITVLQIHV--DEPEGDILLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPV 536
D +D LI L H+ +E +G IL+FL G + I + L ++ D +++P+
Sbjct: 449 DKVDLDLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVM-FKSD--RFIIIPL 505
Query: 537 YSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLD 596
+S +P+ Q+++F+ PPG RK+V+ATNIAE S+TID + +VID G K+ ++ + +
Sbjct: 506 HSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVFVIDGGKIKETHFDTQNNIS 565
Query: 597 SLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTM 656
++ +S+A+A QR GRAGR PG CY LY S + +PEI R L L +
Sbjct: 566 TMAAEWVSKANAKQRKGRAGRVQPGHCYHLYN-GLRASLLDDYQLPEILRTPLEELCLQI 624
Query: 657 KAMGINNLLSF--DFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLS 714
K + + + F +DPPS A++ A+ L L ALD + LT LG +A P++P +
Sbjct: 625 KILKLGGIAYFLSKLMDPPSRDAVMLAINHLMELNALDRQEELTPLGVHLARLPVEPHIG 684
Query: 715 KMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQ-PEGDHLTLLAVY 773
KM+L C D +LTI A + F P ++ AD +R + + DHLT++ +
Sbjct: 685 KMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKVADARRKELSKNTKSDHLTVVNAF 744
Query: 774 EAW---KAKNFSLP--WCGENFVNSRSLK 797
W + + F +C E F++ +L+
Sbjct: 745 TGWEETRRRGFRTEKDYCWEYFLSPNTLQ 773
Score = 394 (143.8 bits), Expect = 1.1e-76, Sum P(2) = 1.1e-76
Identities = 89/212 (41%), Positives = 133/212 (62%)
Query: 280 LSIQEQRRSLPIFKL--KNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGK- 336
+ +Q R LP + + K EL+ +++N+V ++ GETG GKTTQ+ Q++ + Y +GK
Sbjct: 177 IEMQRFREKLPSYGMRQKQELVNLINNNRVTVISGETGCGKTTQVTQFILD-DYIERGKG 235
Query: 337 ----IGCTQPRRVAATSVAKRVAEEFG--CRLGEEVGYAIRFED-CTGPDTVIKYMTDGM 389
I CTQPRR++A SVA+RVA E C G+ GY IR + I Y T G+
Sbjct: 236 STCRIVCTQPRRISAISVAERVAAERAEACGNGKSTGYQIRLQSRLPRKQGSILYCTTGI 295
Query: 390 LLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERF 449
+L+ + D++LS S ++LDE HER + +DVL ++K L+ R DL++I+ SATL+AE+F
Sbjct: 296 VLQWLQSDKHLSSISHVVLDEIHERNLQSDVLMSIIKDLLNVRLDLKVILMSATLNAEKF 355
Query: 450 SGYFFNCNIFSIPGRTFPVDINYSRQEVTDYL 481
S YF NC + IPG TFPV + Y ++V + L
Sbjct: 356 SEYFDNCPMIHIPGFTFPV-VEYLLEDVIEKL 386
>ZFIN|ZDB-GENE-030131-4078 [details] [associations]
symbol:dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box
polypeptide 57" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001650 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-030131-4078 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074257
EMBL:BX248102 EMBL:AL935288 EMBL:CT998560 IPI:IPI00513320
Ensembl:ENSDART00000080351 ArrayExpress:F1QCB1 Bgee:F1QCB1
Uniprot:F1QCB1
Length = 1430
Score = 461 (167.3 bits), Expect = 1.4e-76, Sum P(3) = 1.4e-76
Identities = 112/333 (33%), Positives = 180/333 (54%)
Query: 479 DYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPVYS 538
D ++S L ++ P G +L+FL G EI E L + VV P++S
Sbjct: 872 DLVESLLEWIVDGDHSYPPGAVLVFLPGLAEIKQLYEQLQSNRMFNNRRTNRCVVYPLHS 931
Query: 539 ALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSL 598
+L +E Q +F G K++++TNIAE S+TID + YVID G K+ Y+ + ++SL
Sbjct: 932 SLSNEEQQAVFTRPQNGVTKIIISTNIAETSVTIDDVVYVIDSGRMKEKRYDASRSMESL 991
Query: 599 VITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKA 658
+S+A+ALQR GRAGR G C+ L+T + +S +PEIQR+ L L +K
Sbjct: 992 EDVWVSRANALQRKGRAGRVASGVCFHLFTSHRFEHHLSQQQLPEIQRVPLEQLCLRVKV 1051
Query: 659 MGI------NNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPP 712
+ + +++ S ++PP+ +L +A ++L +LGAL +E LT LG +A P+D
Sbjct: 1052 LEVFAERPLDSVFS-QLIEPPTEGSLEAAKQRLCALGALTDEESLTPLGWHLACLPVDVR 1110
Query: 713 LSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQPEGDHLTLLAV 772
+ K++L C D LTI A + F P +++ +A+EK+ F DHL L+
Sbjct: 1111 IGKLMLLGAIFRCLDPALTIAASLAFKSPFVSPWDKREEANEKKLAFSLANSDHLALMQA 1170
Query: 773 YEAW--KAKN-FSL--PWCGENFVNSRSLKKTA 800
Y+ W A++ F +C ENF++ R L++ A
Sbjct: 1171 YKGWCNAAQSGFKAGYQYCRENFLSIRGLQEIA 1203
Score = 403 (146.9 bits), Expect = 1.4e-76, Sum P(3) = 1.4e-76
Identities = 105/284 (36%), Positives = 159/284 (55%)
Query: 200 TAALQSALTKERREVRE--QQLRTMIDSIPKDLN-RPWEDPMPETGERHLAQELRGVG-- 254
T+ S +T R + +E Q L ID + + + E+ +P E ++ R V
Sbjct: 486 TSTSISEITNHRVKQKEVAQILSEDIDDVQDEGDDEDEEECIPVENESYVNLRKRMVKKT 545
Query: 255 -LSARDMPEWKKNAYGKAFTFGQRSK--LSIQEQRRSLPIFKLKNELIQAVHDNQVLILI 311
+ M E K + F + S+ +S+QEQR+ LP ++ + +++ + NQVL++
Sbjct: 546 EIRTEQMQEENKKLC-REFKRKRSSRRYISMQEQRQKLPAWQKREAILECLVKNQVLVIS 604
Query: 312 GETGSGKTTQLAQYLAEAGYTTKGK------IGCTQPRRVAATSVAKRVAEEFGCRLGEE 365
G TG GKTTQ+ Q++ + + G+ I CTQPRR++A +VA RVA+E LG
Sbjct: 605 GMTGCGKTTQIPQFILD-NFLQTGRPDRVANIICTQPRRISAIAVATRVAQERAEALGHS 663
Query: 366 VGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLL 425
GY IR E T + + T G+LLR + D LS + +++DE HERT +D L +L
Sbjct: 664 TGYQIRLETVRSSITRLMFCTTGVLLRRLEGDPELSGVTHVIVDEVHERTEESDFLLLVL 723
Query: 426 KQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPVD 469
K L+ +R DL++I+ SATL+AE FS YF NC IPGRTFPV+
Sbjct: 724 KDLIVKRTDLKVIMMSATLNAELFSQYFNNCPCIHIPGRTFPVE 767
Score = 40 (19.1 bits), Expect = 1.4e-76, Sum P(3) = 1.4e-76
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 181 SVDLSPVKVFKNPEGSLSRTAALQSA 206
S+D P + FK P SR ++ A
Sbjct: 50 SLDFGPSRSFKPPSSRGSRGGGVRGA 75
Score = 38 (18.4 bits), Expect = 2.2e-76, Sum P(3) = 2.2e-76
Identities = 7/29 (24%), Positives = 13/29 (44%)
Query: 91 GRDRKTNYKAEFENDRERSGRYCKSNPPM 119
GR R + ++D E+ R+ P+
Sbjct: 80 GRGRSLGLPRKHDDDEEKRSRFRSEQVPL 108
>UNIPROTKB|Q9H2U1 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:CH471052 GO:GO:0009615 GO:GO:0003725 EMBL:AC018452
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
HOGENOM:HOG000247063 EMBL:AF217190 EMBL:AJ577133 EMBL:AJ577134
EMBL:AK314435 EMBL:AC134026 EMBL:BC036035 EMBL:AB040921
IPI:IPI00027415 IPI:IPI00217760 IPI:IPI00784170 PIR:D56236
RefSeq:NP_001107869.1 RefSeq:NP_065916.2 UniGene:Hs.446270
ProteinModelPortal:Q9H2U1 SMR:Q9H2U1 IntAct:Q9H2U1
MINT:MINT-3066797 STRING:Q9H2U1 PhosphoSite:Q9H2U1 DMDM:74762733
PaxDb:Q9H2U1 PRIDE:Q9H2U1 DNASU:170506 Ensembl:ENST00000308361
Ensembl:ENST00000329463 Ensembl:ENST00000496811 GeneID:170506
KEGG:hsa:170506 UCSC:uc003ezy.4 UCSC:uc003ezz.4 UCSC:uc010hvq.3
CTD:170506 GeneCards:GC03M153990 HGNC:HGNC:14410 HPA:HPA035399
MIM:612767 neXtProt:NX_Q9H2U1 PharmGKB:PA27223 HOVERGEN:HBG081438
InParanoid:Q9H2U1 KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J
PhylomeDB:Q9H2U1 GenomeRNAi:170506 NextBio:88959
ArrayExpress:Q9H2U1 Bgee:Q9H2U1 CleanEx:HS_DHX36
Genevestigator:Q9H2U1 GermOnline:ENSG00000174953 Uniprot:Q9H2U1
Length = 1008
Score = 464 (168.4 bits), Expect = 1.9e-76, Sum P(3) = 1.9e-76
Identities = 111/329 (33%), Positives = 182/329 (55%)
Query: 479 DYLDSALITVL--QIHVDEPEGDILLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPV 536
D +D LI L I ++E +G IL+FL G + I + L ++ D + +++P+
Sbjct: 468 DKVDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVM-FKSD--KFLIIPL 524
Query: 537 YSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLD 596
+S +P+ Q+++F+ PPG RK+V+ATNIAE S+TID + YVID G K+ ++ + +
Sbjct: 525 HSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNIS 584
Query: 597 SLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTM 656
++ +S+A+A QR GRAGR PG CY LY S + +PEI R L L +
Sbjct: 585 TMSAEWVSKANAKQRKGRAGRVQPGHCYHLYN-GLRASLLDDYQLPEILRTPLEELCLQI 643
Query: 657 KAMGINNLLSF--DFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLS 714
K + + + F +DPPS +A++ ++ L L ALD++ LT LG +A P++P +
Sbjct: 644 KILRLGGIAYFLSRLMDPPSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIG 703
Query: 715 KMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQP-EGDHLTLLAVY 773
KM+L C D +LTI A + F P ++ AD +R + DHLT++ +
Sbjct: 704 KMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARRKELAKDTRSDHLTVVNAF 763
Query: 774 EAWK-AKN----FSLPWCGENFVNSRSLK 797
E W+ A+ + +C E F++S +L+
Sbjct: 764 EGWEEARRRGFRYEKDYCWEYFLSSNTLQ 792
Score = 392 (143.0 bits), Expect = 1.9e-76, Sum P(3) = 1.9e-76
Identities = 88/208 (42%), Positives = 128/208 (61%)
Query: 280 LSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGK--- 336
+ +Q R LP + ++ EL+ + ++QV ++ GETG GKTTQ+ Q++ + Y +GK
Sbjct: 198 IEMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILD-NYIERGKGSA 256
Query: 337 --IGCTQPRRVAATSVAKRVAEEFG--CRLGEEVGYAIRFED-CTGPDTVIKYMTDGMLL 391
I CTQPRR++A SVA+RVA E C G GY IR + I Y T G++L
Sbjct: 257 CRIVCTQPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIIL 316
Query: 392 REILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSG 451
+ + D LS S I+LDE HER + +DVL ++K L+ R DL++I+ SATL+AE+FS
Sbjct: 317 QWLQSDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATLNAEKFSE 376
Query: 452 YFFNCNIFSIPGRTFPVDINYSRQEVTD 479
YF NC + IPG TFPV + Y ++V +
Sbjct: 377 YFGNCPMIHIPGFTFPV-VEYLLEDVIE 403
Score = 37 (18.1 bits), Expect = 1.9e-76, Sum P(3) = 1.9e-76
Identities = 8/37 (21%), Positives = 18/37 (48%)
Query: 190 FKNPEGSLSRTAALQSALTKERREVREQQLRTMIDSI 226
+ +G ++ A Q E RE+Q+ +++S+
Sbjct: 66 YAKKQGQKNKEAERQERAVVHMDERREEQIVQLLNSV 102
>ZFIN|ZDB-GENE-050419-20 [details] [associations]
symbol:si:dkey-119o24.1 "si:dkey-119o24.1"
species:7955 "Danio rerio" [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-050419-20 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000247063 GeneTree:ENSGT00550000074257
HOVERGEN:HBG081438 KO:K14442 OrthoDB:EOG4K6G3J OMA:GRIAYND
EMBL:BX908763 EMBL:BX927166 IPI:IPI00633899 RefSeq:NP_001122016.1
UniGene:Dr.130296 Ensembl:ENSDART00000109467 GeneID:569072
KEGG:dre:569072 InParanoid:A3KQN8 NextBio:20889491 Uniprot:A3KQN8
Length = 1037
Score = 472 (171.2 bits), Expect = 2.2e-76, Sum P(2) = 2.2e-76
Identities = 118/337 (35%), Positives = 186/337 (55%)
Query: 479 DYLDSALITVLQIH--VDEPEGDILLFLTGQEEIDFACESLC-EKIKALGKDVPELVVLP 535
D +D L L H V+E EG IL+FL G + I + L +++ G+ +++P
Sbjct: 482 DNIDLELTAALIRHIAVNENEGAILVFLPGWDNISTLNDLLMSDQMFKSGRY--RFIIIP 539
Query: 536 VYSALPSEIQSRI-------FEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNV 588
++S +P+ Q+++ F+ PPG RK+V+ATNIAE S+TID + YVID G K+
Sbjct: 540 LHSLMPTVSQTQVISLFPQVFKKPPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETH 599
Query: 589 YNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRIN 648
++ + + ++ +S A+A QR GRAGR PGKCY LY S + +PEIQR
Sbjct: 600 FDTQNNIRTMTAEWVSIANAKQRKGRAGRVSPGKCYHLYN-GLRASLLDNYQLPEIQRTP 658
Query: 649 LVHTTLTMKAMGINNLLSF--DFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAE 706
L L +K + + + +F +DPPS +A+ A+ L L ALD + LT LG +A
Sbjct: 659 LEELCLQIKVLKLGPIATFLQKTMDPPSDRAIELAITHLVDLNALDRDEKLTPLGFHLAR 718
Query: 707 FPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQ-PEGD 765
P++P + KM+L LGC D +LTI A + F P ++ AD++R F Q D
Sbjct: 719 MPVEPHIGKMILFGALLGCLDPVLTIAASLSFKDPFFIPLGKEKIADQRRKMFSQNSRSD 778
Query: 766 HLTLLAVYEAWK-AKN----FSLPWCGENFVNSRSLK 797
HL+++ + W+ AK F +C +NF+++ +L+
Sbjct: 779 HLSIVNAFLGWEDAKRQGSRFEREYCWDNFLSANTLQ 815
Score = 377 (137.8 bits), Expect = 2.2e-76, Sum P(2) = 2.2e-76
Identities = 91/254 (35%), Positives = 150/254 (59%)
Query: 235 EDPMPETGERHLAQELRGVGLSARDMPEWKKNAYGKAFTFGQRSKLSIQEQRRSLPIFKL 294
++ + ET +L Q++ V + D E KK+ K + + + + R+ LP + +
Sbjct: 172 KEELNETNLEYLLQDV--VQIPFLD-EELKKDQQKKE---DNAAYIEMLKFRKKLPSYGM 225
Query: 295 KNELIQAVHDNQVLILIGETGSGKTTQLAQYLAE----AGYTTKGKIGCTQPRRVAATSV 350
+ EL++ + N+VL++ GETG GKTTQ+ Q++ + G + ++ CTQPRR++A SV
Sbjct: 226 REELVRLISANRVLVISGETGCGKTTQVTQFILDDFIQRGQGSLCRVVCTQPRRISAISV 285
Query: 351 AKRVAEEFGCRLGE--EVGYAIRFED-CTGPDTVIKYMTDGMLLREILIDENLSQYSVIM 407
A+RVA E +GE GY IR + + Y T G++L+ + D LS + ++
Sbjct: 286 AERVAVERAEPVGEGKSCGYQIRLQSRLPRKQGSLLYCTTGVILQWLHSDPYLSSITHLV 345
Query: 408 LDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFP 467
LDE HER++ +D+L ++K L+ R DL++++ SATL+AE+FS YF NC + IPG TFP
Sbjct: 346 LDEIHERSVQSDILITIVKDLLTARDDLKVVLMSATLNAEKFSKYFNNCPMIHIPGYTFP 405
Query: 468 VDINYSRQEVTDYL 481
V Y ++V + L
Sbjct: 406 VT-EYLLEDVVELL 418
Score = 45 (20.9 bits), Expect = 1.9e-41, Sum P(2) = 1.9e-41
Identities = 18/74 (24%), Positives = 32/74 (43%)
Query: 195 GSLSRTAA-LQSALTKERREVREQQLRTMIDSIPKDLNRPWEDPMPETGER-HLAQELRG 252
G + ++ A +S E RE+ + +++++ +DL R D P T + E RG
Sbjct: 77 GGIKKSEAERRSRAVVHMDESREKHITQLLNTVQRDLGR---DVHPSTSQSWRNKDEARG 133
Query: 253 VGLSARDMPEWKKN 266
D P +N
Sbjct: 134 HSYFDGDDPVETQN 147
>UNIPROTKB|Q3ZBE0 [details] [associations]
symbol:DQX1 "ATP-dependent RNA helicase DQX1" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0004386
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 EMBL:BC103411 IPI:IPI00704154
RefSeq:NP_001030399.1 UniGene:Bt.49583 PRIDE:Q3ZBE0
Ensembl:ENSBTAT00000033191 GeneID:517947 KEGG:bta:517947 CTD:165545
InParanoid:Q3ZBE0 KO:K14433 OMA:CGQAVQA OrthoDB:EOG4548Z3
NextBio:20872543 Uniprot:Q3ZBE0
Length = 719
Score = 768 (275.4 bits), Expect = 3.1e-76, P = 3.1e-76
Identities = 199/563 (35%), Positives = 304/563 (53%)
Query: 246 LAQELRGVGLSARDMPEWKKNAYGK--AFTFGQRSKLSIQEQRRSLPIFKLKNELIQAVH 303
+A +L G+ + PE + A F R + EQRRSLP++ + ++ +
Sbjct: 1 MASQLLGLEEESGPNPEESELAVNPFDGLPFSSRY-YKLLEQRRSLPVWAARFIFLEHLE 59
Query: 304 DNQ--VLILIGETGSGKTTQLAQYLAE---AGYTTKGKIGCTQPRRVAATSVAKRVAEEF 358
+ V+++ GE G GK+TQ+ Q+ AE A KG + TQP +AA S+A RVA+E
Sbjct: 60 SSPSGVVLVSGEPGCGKSTQIPQWCAEFVLARGFQKGWVTVTQPYPLAALSLALRVADEM 119
Query: 359 GCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINT 418
LG EVGY+I EDCTGPDT++++ D +LL+E+ V++LDEA ER++ +
Sbjct: 120 DLTLGHEVGYSIPQEDCTGPDTLLRFCWDRLLLQEVASTRGTGARGVLILDEAQERSVAS 179
Query: 419 DVLFGLLK--QLVKRRPDLRLIV-TSATLDAERFSGYFFNCNIFSIPGRT--FPVDINYS 473
D+L GLL+ +L DLR++V T +L+ + ++ +P +T P + Y
Sbjct: 180 DLLQGLLRDARLGSLPGDLRVVVVTDPSLEP-KLQDFWGGPPTVCVPRKTGSCPTPV-YR 237
Query: 474 RQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEKIKALGKDVPELVV 533
D +D+A VL+ +E GD+L++L +EEI CESL K+++L P V
Sbjct: 238 DSLPADRVDAACQAVLEWCQEEAPGDVLVYLPSEEEISLCCESLSRKVRSLENQGPPPRV 297
Query: 534 LPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQ 593
LP++ +Q+ ++E G RKVVV +A+ S ++ I +VID G ++VY+P+
Sbjct: 298 LPLHPGCGQAVQA-VYEDTESGARKVVVTHWLADFSFSLPSIRHVIDSGLELRSVYSPQI 356
Query: 594 RLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTT 653
R +S V+ P+S+ A R RA PG C LY +S E P + NL
Sbjct: 357 RAESQVLRPVSKCQAEARRLRAAGIPPGSCLCLYPKSFLELEAPYLPQPRVWAENLSSLM 416
Query: 654 LTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPL 713
L +K I F+D P+P+AL+ A+E L L ALD++G L+ LG ++EFPL P L
Sbjct: 417 LLLKRRQIAEPGKCHFLDRPAPEALMQALEDLDYLAALDDDGDLSDLGVILSEFPLAPEL 476
Query: 714 SKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQPEGDHLTLLAVY 773
+K LLAS + C DE+LT+ AM+ FTRP +A +RA +GDH +L+ VY
Sbjct: 477 AKALLASCEFDCVDEMLTLAAMLTAAPGFTRPPVCAEEAALRRA-LEHVDGDHSSLIQVY 535
Query: 774 EAWKAKNFSLPWCGENFVNSRSL 796
EA+ WC +N +L
Sbjct: 536 EAFIQSGADKAWCQARGLNWAAL 558
>TAIR|locus:2052841 [details] [associations]
symbol:HVT1 "helicase in vascular tissue and tapetum"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=RCA] [GO:0000911 "cytokinesis
by cell plate formation" evidence=RCA] InterPro:IPR001374
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00393 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 IPI:IPI00521007
RefSeq:NP_850154.2 UniGene:At.19969 ProteinModelPortal:F4INY4
SMR:F4INY4 PRIDE:F4INY4 EnsemblPlants:AT2G30800.1 GeneID:817631
KEGG:ath:AT2G30800 OMA:PYNNVST Uniprot:F4INY4
Length = 1299
Score = 458 (166.3 bits), Expect = 6.1e-76, Sum P(3) = 6.1e-76
Identities = 114/333 (34%), Positives = 182/333 (54%)
Query: 479 DYLDSALITVLQIHV--DEPEGDILLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPV 536
+ +D +LI L + D +G IL+FL G ++I+ + L E D + ++ +
Sbjct: 531 EQVDVSLIQQLMRKICGDSEDGAILVFLPGWDDINKTRQRLLEN--PFFADSAKFDIICL 588
Query: 537 YSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLD 596
+S +P+ Q ++F PPG RK+V+ATNIAE+++TID + YVID G K+ Y+P +
Sbjct: 589 HSMVPAGEQKKVFNRPPPGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNNVS 648
Query: 597 SLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTM 656
+L + +S+A+A QR GRAGR PG CY LY+ S M +PEI+R+ + L +
Sbjct: 649 TLQSSWVSKANAKQRQGRAGRCQPGICYHLYSRLRAAS-MPDFKVPEIKRMPVEELCLQV 707
Query: 657 KAMGINNLLSFDFV----DPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPP 712
K + N + DF+ DPP Q++ +A+ L +GAL + LT+LG+K P+ P
Sbjct: 708 KILD-PNCKTNDFLQKLLDPPVDQSIANALSILQDIGALTPQEELTELGEKFGHLPVHPL 766
Query: 713 LSKMLLASVDLGCSDEILTIIAMIQTGHIFTRP-----RERQAKADEKRARFFQPEGDHL 767
+SKML +V + C D LT+ FT P R++ A A + A + DHL
Sbjct: 767 ISKMLFFAVLVNCLDPALTLACAADYKEPFTMPMSPVERQKAAAAKLELASLCGGDSDHL 826
Query: 768 TLLAVYEAWK---AKNFSLPWCGENFVNSRSLK 797
++A +E WK + S +C + FV+ ++K
Sbjct: 827 AVVAAFECWKNAKGRGLSAEFCSQYFVSPSAMK 859
Score = 401 (146.2 bits), Expect = 6.1e-76, Sum P(3) = 6.1e-76
Identities = 87/209 (41%), Positives = 133/209 (63%)
Query: 282 IQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKG---KIG 338
I + R LPI K+ + AV NQV+++ GETG GKTTQ+ QYL + +++K KI
Sbjct: 180 ITKLRSKLPITSFKDAITSAVESNQVILISGETGCGKTTQVPQYLLDHMWSSKRETCKIV 239
Query: 339 CTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDE 398
CTQPRR++A SV++R++ E G +GE +GY +R + G + + + T+G+LLR +L+ +
Sbjct: 240 CTQPRRISAMSVSERISCERGESIGENIGYKVRLQSKGGRHSSVVFCTNGILLR-VLVGK 298
Query: 399 ----NLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFF 454
++S + I++DE HER +D + +++ L+ P LRLI+ SATLDAERFSGYF
Sbjct: 299 GSVSSVSDITHIIVDEIHERDCYSDFMLAIIRDLLPSNPHLRLILMSATLDAERFSGYFG 358
Query: 455 NCNIFSIPGRTFPVDINYSRQEVTDYLDS 483
C + +PG T+PV Y ++V L S
Sbjct: 359 GCPVVRVPGFTYPVRTLYL-EDVLSILKS 386
Score = 37 (18.1 bits), Expect = 6.1e-76, Sum P(3) = 6.1e-76
Identities = 9/23 (39%), Positives = 16/23 (69%)
Query: 275 GQRSKLSIQEQRRSLPIFKLKNE 297
G +SK S + ++R L IFK +++
Sbjct: 62 GIQSKSSGRGEQRRLSIFKSRHK 84
>UNIPROTKB|F1N1A2 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RAYKGWQ EMBL:DAAA02030601
EMBL:DAAA02030599 EMBL:DAAA02030600 IPI:IPI00709831
Ensembl:ENSBTAT00000019540 ArrayExpress:F1N1A2 Uniprot:F1N1A2
Length = 1382
Score = 453 (164.5 bits), Expect = 2.0e-75, Sum P(3) = 2.0e-75
Identities = 110/320 (34%), Positives = 171/320 (53%)
Query: 492 HVDEPE-GDILLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFE 550
H P+ G IL+FL G EI E L + V+ P++S+L SE Q +F
Sbjct: 836 HSYPPDPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFV 895
Query: 551 PAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQ 610
P G K++++TNIAE S+TID + YVID G K+ Y+ + ++SL T +SQA+ALQ
Sbjct: 896 KPPMGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQ 955
Query: 611 RAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGI---NNLLSF 667
R GRAGR G C+ L+T + ++ +PEIQR+ L L +K + + +NL S
Sbjct: 956 RKGRAGRVASGVCFHLFTSHHFNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSV 1015
Query: 668 --DFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGC 725
++PP +L ++ +L LGAL + LT LG +A P+D + K++L C
Sbjct: 1016 FARLIEPPHADSLRASKIRLRDLGALTPDETLTPLGYHLASLPVDVRIGKLMLFGSIFRC 1075
Query: 726 SDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQPEGDHLTLLAVYEAWKAK-----N 780
D LTI A + F P +++ +A++K+ F D+L LL Y+ W+
Sbjct: 1076 LDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSDYLALLRAYKGWQLSMKEGMR 1135
Query: 781 FSLPWCGENFVNSRSLKKTA 800
S +C +NF++ R L++ A
Sbjct: 1136 ASYNYCRQNFLSGRVLQEMA 1155
Score = 401 (146.2 bits), Expect = 2.0e-75, Sum P(3) = 2.0e-75
Identities = 91/206 (44%), Positives = 132/206 (64%)
Query: 270 KAFTFGQRSKL--SIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLA 327
K F Q S+ S+ ++R+SLP ++ + +++ + +QVL++ G TG GKTTQ+ Q++
Sbjct: 516 KQFRIKQASRQFQSVLQERQSLPAWEERENILKLLSKHQVLVVSGMTGCGKTTQIPQFIL 575
Query: 328 EA---GYTTK-GKIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIK 383
+ G K I CTQPRR++A SVA+RVA+E R+G VGY IR E T +
Sbjct: 576 DDSLNGPPEKVANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLL 635
Query: 384 YMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSAT 443
Y T G+LLR + D L + I++DE HERT +D L +LK +V +RP L++I+ SAT
Sbjct: 636 YCTTGVLLRRLEGDTALQGVTHIIVDEVHERTEESDFLLLVLKDIVLQRPTLQVILMSAT 695
Query: 444 LDAERFSGYFFNCNIFSIPGRTFPVD 469
L+AE FS YF +C + +IPGRTFPVD
Sbjct: 696 LNAELFSEYFNSCPVITIPGRTFPVD 721
Score = 39 (18.8 bits), Expect = 2.0e-75, Sum P(3) = 2.0e-75
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 268 YGKAFTFGQRSK 279
YGKA TF + S+
Sbjct: 386 YGKALTFAETSE 397
>UNIPROTKB|E2QXW1 [details] [associations]
symbol:DQX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR007502 Pfam:PF04408 SMART:SM00847 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 CTD:165545 KO:K14433 OMA:CGQAVQA
EMBL:AAEX03010965 RefSeq:XP_532994.2 Ensembl:ENSCAFT00000013395
GeneID:475784 KEGG:cfa:475784 NextBio:20851558 Uniprot:E2QXW1
Length = 719
Score = 758 (271.9 bits), Expect = 3.5e-75, P = 3.5e-75
Identities = 198/563 (35%), Positives = 302/563 (53%)
Query: 246 LAQELRGVGLSARDMP---EWKKNAYGKAFTFGQRSKLSIQEQRRSLPIFKLKNELIQAV 302
+A +L G+ + P E N + F R + EQRR+LPI+ + ++ +
Sbjct: 1 MASQLLGLAEESGPSPGESELAVNPFD-GLPFSSRY-YELLEQRRALPIWATRFIFLEQL 58
Query: 303 HDNQ--VLILIGETGSGKTTQLAQYLAEAGYTT---KGKIGCTQPRRVAATSVAKRVAEE 357
+ V+++ GE GSGK+TQ+ Q+ AE +G++ TQP +AA S+A RVA+E
Sbjct: 59 ESSPSGVVLVSGEPGSGKSTQIPQWCAEFALARGFKEGRVTVTQPYPLAALSLAVRVADE 118
Query: 358 FGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTIN 417
LG+EVGY+I EDCTGPDT++++ D +LL+E+ + V++LDEA ER++
Sbjct: 119 MDLTLGQEVGYSIPQEDCTGPDTLLRFCWDRLLLQEVASTRGTGAWGVLVLDEAQERSVA 178
Query: 418 TDVLFGLLKQL-VKRRP-DLRLIVTSATLDAERFSGYFFNCNIFSIP-GR-TFPVDINYS 473
+D+L GLL+ + P D R++V + + ++ N I +P G P + Y
Sbjct: 179 SDLLQGLLRNAKLGNLPGDSRVVVVTDPALEPKLQAFWGNPTIVHVPRGPGACPTPV-YR 237
Query: 474 RQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEKIKALGKDVPELVV 533
TD +++A VL++ E GD+L++L +EEI CESL +++ L P V
Sbjct: 238 DIVPTDRVEAACQAVLELCAKEAPGDVLVYLPSEEEILQCCESLSREVEPLALRGPPPRV 297
Query: 534 LPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQ 593
LP++ +Q+ +E G RKVVV +A+ S ++ I +VID G ++VYNP+
Sbjct: 298 LPLHPGHGPAVQAA-YEDIDLGARKVVVTHWLADFSFSLPSIRHVIDSGLELRSVYNPQI 356
Query: 594 RLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTT 653
R +S V+ PIS+ A R RA PG C LY ES E P + NL
Sbjct: 357 RAESQVLRPISRCQAEARRLRARGIPPGSCICLYPESFLELEAPLLPPPRVCEENLSPMV 416
Query: 654 LTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPL 713
L +K I F+D P+P+AL+ A+E L L ALD++G L+ LG ++EFPL P L
Sbjct: 417 LLLKRRQIAEPGECHFLDRPAPEALMQALEDLDYLAALDDDGNLSDLGVILSEFPLPPEL 476
Query: 714 SKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQPEGDHLTLLAVY 773
+K LLAS + C DE+LT+ AM+ FT P +A +RA +GDH +L+ VY
Sbjct: 477 AKALLASCEFDCVDEMLTLAAMLTAAPGFTHPPLSAEEAALRRA-LEHADGDHSSLIQVY 535
Query: 774 EAWKAKNFSLPWCGENFVNSRSL 796
EA+ WC +N +L
Sbjct: 536 EAFIQSGADEAWCQARGLNWAAL 558
>UNIPROTKB|E1C388 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 CTD:54505 OMA:WLLYQEK
GeneTree:ENSGT00550000074257 EMBL:AADN02054528 EMBL:AADN02054529
EMBL:AADN02054530 IPI:IPI00580778 RefSeq:XP_424728.2
UniGene:Gga.12357 Ensembl:ENSGALT00000023700 GeneID:427136
KEGG:gga:427136 NextBio:20828443 Uniprot:E1C388
Length = 1372
Score = 432 (157.1 bits), Expect = 3.5e-75, Sum P(3) = 3.5e-75
Identities = 112/343 (32%), Positives = 189/343 (55%)
Query: 180 VSVDLSPVKVFKNPEGSLSRTAALQSALTKERREVREQQL-----RTMIDSIPKDLNRPW 234
V ++ S ++ K E + + + K ++++QQ +T + P+D W
Sbjct: 470 VWLEWSDIEKKKEEENKIETNKPRDNFIAKLLNKLKQQQQLQSEKQTKVSEGPED---SW 526
Query: 235 EDPMPETGERHLAQELRGVGLSARDMPEWKKNAYGKAFTFGQRSKLSIQEQRRSLPIFKL 294
E+ + + +L+ E D E +N + K + + K ++R+ LP+FK
Sbjct: 527 ENLVSDEDFNNLSLETADT-----DNLEPSRNLFRKLQSSSRYQKFL--KERQELPVFKH 579
Query: 295 KNELIQAVHDNQVLILIGETGSGKTTQLAQYLAE-----AGYTTKGKIGCTQPRRVAATS 349
++ +++ + ++V+++ GETGSGK+TQ+ +L E G T K I CTQPRR++A S
Sbjct: 580 RHSIVETLKKHRVVVVAGETGSGKSTQVPHFLLEDLLLDEG-TRKCNIVCTQPRRISAVS 638
Query: 350 VAKRVAEEFGCRLGEE-----VGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYS 404
+A RV EE GC G GY IR E TG T + Y T G+LLR++ D LS S
Sbjct: 639 LATRVCEELGCESGPGGKNSLCGYQIRMESRTGEATRLLYCTTGVLLRKLQEDGLLSSIS 698
Query: 405 VIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGR 464
+++DE HER++++D L +LK+++ +R DL LI+ SAT+D+E+FS YF +C I I GR
Sbjct: 699 HVIVDEVHERSVHSDFLLVILKEILHKRSDLHLILMSATVDSEKFSSYFAHCPILRISGR 758
Query: 465 TFPVDINYSRQ--EVTDYLDSALITVLQIHVDEPEGDILLFLT 505
++PV++ + E T Y+ Q ++E E +I++ +T
Sbjct: 759 SYPVEVFHVEDVIEATGYVLEKDSEYCQKFLEEEE-EIMINVT 800
Score = 420 (152.9 bits), Expect = 3.5e-75, Sum P(3) = 3.5e-75
Identities = 108/309 (34%), Positives = 161/309 (52%)
Query: 497 EGDILLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGG 556
EG +L+FL G I + + + D L+ L +S L ++ Q+ F P G
Sbjct: 868 EGAVLIFLPGLAHIQQLYDLISTDRRFSLCDRHRLIAL--HSVLSTQDQAAAFTVPPLGV 925
Query: 557 RKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAG 616
RK+V+ATNIAE +TI + +VID G K+N Y+ ++ SL T +S+ASALQR GRAG
Sbjct: 926 RKIVLATNIAETGITIPDVVFVIDSGRTKENRYHESSQMSSLEETFVSKASALQRQGRAG 985
Query: 617 RTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSF--DFVDPPS 674
R G C+R+YT + S M ++PEI R+ L L + + + F +DPP
Sbjct: 986 RVRDGFCFRMYTRDRFESFME-YSVPEILRVPLEELCLHIMKCNLGSPEDFLSRALDPPQ 1044
Query: 675 PQALISAMEQLYSLGALD-EEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTII 733
PQ + +AM L +GA E LT LG+ +A P++ + KML+ GC D + T+
Sbjct: 1045 PQVIGNAMNLLRKIGACQLNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATLA 1104
Query: 734 AMIQTGHIFTRPRERQAKADEKRARFFQPEGDHLTLLAVYEAWK-AKN-----FSLPWCG 787
A++ FT P R+ +AD ++ DHLT+ Y WK A+ + +C
Sbjct: 1105 AVMTEKSPFTTPIGRKDEADLAKSSIALAVSDHLTIYNAYLGWKKARQEGGHRAEMTYCR 1164
Query: 788 ENFVNSRSL 796
NF+N SL
Sbjct: 1165 RNFLNRTSL 1173
Score = 41 (19.5 bits), Expect = 3.5e-75, Sum P(3) = 3.5e-75
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 80 PKPKLQSKKKSGRD---RKTNYKAEFE 103
P P+L KKK + ++TN K + E
Sbjct: 205 PPPRLADKKKKDNNPETKETNMKEQKE 231
Score = 39 (18.8 bits), Expect = 2.1e-34, Sum P(2) = 2.1e-34
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 8 RELTYLSLLSKICSELETHLG 28
R ++ +SL +++C EL G
Sbjct: 632 RRISAVSLATRVCEELGCESG 652
>RGD|1591766 [details] [associations]
symbol:Dqx1 "DEAQ box RNA-dependent ATPase 1" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194 SMART:SM00847
RGD:1591766 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CH473957
InterPro:IPR011709 Pfam:PF07717 GeneTree:ENSGT00650000093246
CTD:165545 KO:K14433 OMA:CGQAVQA OrthoDB:EOG4548Z3 IPI:IPI00194915
RefSeq:NP_001102877.1 UniGene:Rn.154059 Ensembl:ENSRNOT00000011002
GeneID:680434 KEGG:rno:680434 UCSC:RGD:1591766 NextBio:718702
Uniprot:D4A474
Length = 717
Score = 755 (270.8 bits), Expect = 7.3e-75, P = 7.3e-75
Identities = 189/516 (36%), Positives = 291/516 (56%)
Query: 284 EQRRSLPIFKLKNELIQAVHDNQ--VLILIGETGSGKTTQLAQYLAE----AGYTTKGKI 337
EQRR+LPI+ + ++ + + V+++ GE GSGK+TQ+ Q+ AE G+ T G++
Sbjct: 37 EQRRALPIWAARFLFLEHLESSPTGVVLVSGEPGSGKSTQIPQWCAEFALARGFQT-GQV 95
Query: 338 GCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILID 397
TQP +AA S+A RVA+E LG E+GY+I EDCTGP+T++++ D + L+E+
Sbjct: 96 TVTQPYPLAAMSLASRVADEMDLTLGHEIGYSIPQEDCTGPNTMLRFCWDRLFLQEVAST 155
Query: 398 ENLSQYSVIMLDEAHERTINTDVLFGLLKQL-VKRRP-DLRL-IVTSATLDAERFSGYFF 454
+SV++LDEA ER++ +D+L GLL+ ++ P D R+ IVT + L+ +F ++
Sbjct: 156 RGPGAWSVLVLDEAQERSVASDLLQGLLRDTRLRNLPGDPRVVIVTDSALEP-KFQAFWG 214
Query: 455 NCNIFSIP---GRTFPVDINYSRQEVTDYLDSALITVLQI-HVDEPEGDILLFLTGQEEI 510
N +P G P + Y D +++A VL++ +E GD+L++L +EEI
Sbjct: 215 NSPTVHVPREPGEN-PT-LTYKDTVPADLVEAACQAVLELCQREEAPGDVLVYLPSEEEI 272
Query: 511 DFACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASL 570
CESL ++ L P VLP++ IQ+ ++E RK+VV +A+ S
Sbjct: 273 SLCCESLSREMGMLAVPGPLPRVLPLHPGCGQAIQT-VYEDTDVSVRKIVVTHWLADFSF 331
Query: 571 TIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTES 630
++ I +VID G ++VYNP+ R +S V+ IS+ A R RA PG C RLY++S
Sbjct: 332 SLPFIQHVIDSGLELRSVYNPRIRAESQVLRRISKCQAEARLLRARGFPPGTCLRLYSKS 391
Query: 631 AYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGA 690
E P P++ NL L +K I F+D P+P+AL+ A+E L L A
Sbjct: 392 TLDLEAPPLPHPKVCEENLSSLVLLLKRKQIAEPGECHFLDRPAPEALMQALEDLDYLAA 451
Query: 691 LDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQA 750
LD++G L+ LG ++EFPL P L+K LLAS + C DE+LT+ AM+ FTRP
Sbjct: 452 LDDDGDLSDLGIILSEFPLPPELAKALLASCEFNCVDEMLTLAAMLTAAPGFTRPPLCAG 511
Query: 751 KADEKRARFFQPEGDHLTLLAVYEAWKAKNFSLPWC 786
+A +R +GDH +L+ VYEA+ WC
Sbjct: 512 EAALRRG-LEHADGDHSSLIQVYEAFVQSGADETWC 546
>UNIPROTKB|F1M8G5 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
RGD:1310340 NextBio:689608 IPI:IPI00391644
Ensembl:ENSRNOT00000037714 ArrayExpress:F1M8G5 Uniprot:F1M8G5
Length = 1338
Score = 465 (168.7 bits), Expect = 2.3e-74, Sum P(2) = 2.3e-74
Identities = 111/315 (35%), Positives = 172/315 (54%)
Query: 496 PEGDILLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPG 555
P G IL+FL G EI E L + V+ P++S+L SE Q +F P G
Sbjct: 798 PPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHSSLSSEEQQAVFVKPPLG 857
Query: 556 GRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRA 615
K++++TNIAE S+TID + YVID G K+ Y+ + ++SL T +SQA+ALQR GRA
Sbjct: 858 VTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLEDTFVSQANALQRKGRA 917
Query: 616 GRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGI---NNLLS-FD-FV 670
GR G C+ L+T Y ++ +PEIQR+ L L +K + + +NL S F +
Sbjct: 918 GRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFSRLI 977
Query: 671 DPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEIL 730
+PP +L ++ +L LGAL + LT LG +A P+D + K++L C D L
Sbjct: 978 EPPHVDSLRASKVRLRDLGALTPDEKLTPLGYHLASLPVDVRIGKLMLLGSIFRCLDPAL 1037
Query: 731 TIIAMIQTGHIFTRPRERQAKADEKRARFFQPEGDHLTLLAVYEAWK-----AKNFSLPW 785
TI A + F P +++ +A++K+ F D+L LL Y+ W+ + S +
Sbjct: 1038 TIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSDYLALLCAYKGWQLSTKESARASYNY 1097
Query: 786 CGENFVNSRSLKKTA 800
C +NF++ R+L++ A
Sbjct: 1098 CRQNFLSGRTLQEMA 1112
Score = 370 (135.3 bits), Expect = 2.3e-74, Sum P(2) = 2.3e-74
Identities = 84/206 (40%), Positives = 125/206 (60%)
Query: 270 KAFTFGQRSKL--SIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLA 327
+ F Q S+ +I ++R+ LP ++ + +++ + +QV+++ G TG GKTTQ+ Q++
Sbjct: 474 RQFQMKQASRQFHAILQERQLLPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFIL 533
Query: 328 EAGYTTK----GKIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIK 383
+ I CTQPRR++A SVA+RVA+E R+G VGY IR E T +
Sbjct: 534 DNSLNGPPERVANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLL 593
Query: 384 YMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSAT 443
Y T G+LLR + D L + I++DE HERT +D L +LK +V +R L++I+ SAT
Sbjct: 594 YCTTGVLLRRLEGDATLQGVTHIIVDEVHERTEESDFLLLVLKDIVMQRATLQVILMSAT 653
Query: 444 LDAERFSGYFFNCNIFSIPGRTFPVD 469
LDA FS YF C + +IPGR FPVD
Sbjct: 654 LDAGLFSKYFSYCPVITIPGRAFPVD 679
>TIGR_CMR|CPS_2243 [details] [associations]
symbol:CPS_2243 "ATP-dependent helicase HrpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004386
"helicase activity" evidence=ISS] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR010222 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578 OMA:TYQFEPG
InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:YP_268968.1 ProteinModelPortal:Q482P9 STRING:Q482P9
GeneID:3518699 KEGG:cps:CPS_2243 PATRIC:21467591
BioCyc:CPSY167879:GI48-2313-MONOMER Uniprot:Q482P9
Length = 1375
Score = 743 (266.6 bits), Expect = 2.6e-74, Sum P(2) = 2.6e-74
Identities = 173/419 (41%), Positives = 256/419 (61%)
Query: 289 LPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCTQPRRVAAT 348
LPI + ++ A+ NQV+I+ GETGSGKTTQ+ + E G G IG TQPRR+AA
Sbjct: 99 LPISENAAQISAAIDANQVVIIAGETGSGKTTQIPKICLELGRGVDGLIGHTQPRRIAAR 158
Query: 349 SVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIML 408
+VA R+AEE G +LGE+VGY +RF D + IK MTDG+LL E+ D L +Y I++
Sbjct: 159 TVANRIAEELGTKLGEQVGYKVRFNDQVSEQSYIKLMTDGILLAEMQRDRLLLKYDTIII 218
Query: 409 DEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCN-----IFSIPG 463
DEAHER++N D + G LKQ++ +RPDL+LI+TSAT+D +RF+ +F + N I + G
Sbjct: 219 DEAHERSLNIDFILGYLKQILIKRPDLKLIITSATIDPQRFAKHFSSKNGLPAPIIEVSG 278
Query: 464 RTFPVDINY---SRQEVTDYLDSA-----LITVLQIHVDEPE--GDILLFLTGQEEIDFA 513
RTFPV++ Y + + V D D + +I+ + VDE G+ + + E +
Sbjct: 279 RTFPVEMRYRPLNDRAVIDDDDQSPQEVDIISGILSAVDELSDCGNGDILVFLNGEREIR 338
Query: 514 CESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTID 573
++ +KA ++ VLP+Y+ L Q++IF+P GR +V+ATN+AE SLT+
Sbjct: 339 -DTAAALVKA---NLRHTNVLPLYARLTVSEQNQIFKPH--SGRNIVLATNVAETSLTVP 392
Query: 574 GIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYR 633
GI YVIDPG A+ + Y+ + ++ L I P+SQASA QR+GR GR G C RLY+E Y+
Sbjct: 393 GIKYVIDPGTARISRYSYRTKVQRLPIEPVSQASANQRSGRCGRVSEGICIRLYSEDDYK 452
Query: 634 SEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALD 692
S + T PEI R NL L M A+ + ++ +F FV+ P + + + L + A++
Sbjct: 453 SR-AEFTDPEILRTNLATVILQMHALDLGDIANFPFVEAPDNRNITDGVRLLEEIAAVE 510
Score = 479 (173.7 bits), Expect = 1.0e-41, Sum P(2) = 1.0e-41
Identities = 120/321 (37%), Positives = 185/321 (57%)
Query: 469 DINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEKIKALGKDV 528
D + S QEV D + L V ++ D GDIL+FL G+ EI +L +KA ++
Sbjct: 298 DDDQSPQEV-DIISGILSAVDELS-DCGNGDILVFLNGEREIRDTAAAL---VKA---NL 349
Query: 529 PELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNV 588
VLP+Y+ L Q++IF+P GR +V+ATN+AE SLT+ GI YVIDPG A+ +
Sbjct: 350 RHTNVLPLYARLTVSEQNQIFKPH--SGRNIVLATNVAETSLTVPGIKYVIDPGTARISR 407
Query: 589 YNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRIN 648
Y+ + ++ L I P+SQASA QR+GR GR G C RLY+E Y+S + T PEI R N
Sbjct: 408 YSYRTKVQRLPIEPVSQASANQRSGRCGRVSEGICIRLYSEDDYKSR-AEFTDPEILRTN 466
Query: 649 LVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDE--------EGL---- 696
L L M A+ + ++ +F FV+ P + + + L + A++ +G
Sbjct: 467 LATVILQMHALDLGDIANFPFVEAPDNRNITDGVRLLEEIAAVESIENADKNAKGKASST 526
Query: 697 ---LTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKAD 753
LTK G+ +A+FP+DP L+KM+++S++ GC ++IL I++ + RP E+Q +D
Sbjct: 527 ATQLTKSGRLLAKFPIDPRLAKMVVSSIEFGCIEQILIIVSALSIQDPRERPHEKQQLSD 586
Query: 754 EKRARFFQPEGDHLTLLAVYE 774
EK RF D ++LL +++
Sbjct: 587 EKHNRFKDKSSDFISLLNLWQ 607
Score = 45 (20.9 bits), Expect = 2.6e-74, Sum P(2) = 2.6e-74
Identities = 9/39 (23%), Positives = 17/39 (43%)
Query: 746 RERQAKADEKRARFFQPEGDHLTLLAVYEAWKAKNFSLP 784
RE + D +A D L+ + + W+ + +LP
Sbjct: 892 RENEQLLDFSKAFLLNESSDELSTIEYPDVWQQDSITLP 930
>FB|FBgn0052533 [details] [associations]
symbol:CG32533 species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:AE014298 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
OMA:DSDQVFH GeneTree:ENSGT00700000104421 EMBL:AY058623
RefSeq:NP_728244.1 UniGene:Dm.4145 SMR:Q9VWI5
EnsemblMetazoa:FBtr0074786 GeneID:32933 KEGG:dme:Dmel_CG32533
UCSC:CG32533-RA FlyBase:FBgn0052533 InParanoid:Q9VWI5
OrthoDB:EOG4V9S5G GenomeRNAi:32933 NextBio:781096 Uniprot:Q9VWI5
Length = 1139
Score = 429 (156.1 bits), Expect = 5.2e-74, Sum P(2) = 5.2e-74
Identities = 113/354 (31%), Positives = 183/354 (51%)
Query: 458 IFSIPGRTFPVDINY--------------SRQEVTDYLDSA-LITVLQIHVDE--P---E 497
+ +PGR FP+ + Y S++ + +D A + VL + +D+ P
Sbjct: 314 LVQVPGRLFPIKLRYLPPPALELKAGQATSKRSQRNRIDPAPFVQVLSL-IDQQYPTSER 372
Query: 498 GDILLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGR 557
GD+L+F++G EI ES+ E + + +VLP++S QS++F+ AP G R
Sbjct: 373 GDVLIFVSGVNEI----ESVVEAVHEYATEQTHWLVLPLHSGQAIADQSKVFDYAPEGMR 428
Query: 558 KVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGR 617
K +V+TNIAE SLT+DG+ +V+D G K+ ++ + L +S++SA QR GRAGR
Sbjct: 429 KCIVSTNIAETSLTVDGVRFVVDSGKVKEMNFDATCKGQRLKEFWVSKSSADQRKGRAGR 488
Query: 618 TGPGKCYRLYTESAYRS-EMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQ 676
TGPG C+RLYT Y + E PT PEI R+ L L M +MG+ ++ +F F++ P +
Sbjct: 489 TGPGVCFRLYTAEQYNAFEAYPT--PEIYRVPLDTMLLQMVSMGLPDVRAFPFIEAPETE 546
Query: 677 ALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMI 736
+ + L AL E +T LG+ +A P++ + KMLL +++LT+ AM+
Sbjct: 547 RIEQTILALKQHCALSVEEKITPLGRSLANLPVELSIGKMLLMGSVFPEVEQLLTLAAML 606
Query: 737 QTGHIFTRPRERQAKADEKRARFFQPEGDHLTLLAVYEAW----KAKNFSLPWC 786
+ T + +R GD TL+ +Y W ++ + WC
Sbjct: 607 SVQNPLTNRAHTDQRCVRERESLESDHGDLFTLVRLYNVWVQLKMRRDGTRQWC 660
Score = 403 (146.9 bits), Expect = 5.2e-74, Sum P(2) = 5.2e-74
Identities = 94/243 (38%), Positives = 140/243 (57%)
Query: 239 PETGERHLAQELRGVGL--SARD-MPEWKKNAYGKAFTFGQRSKLS----IQEQRRSLPI 291
P +HLA L L ARD M ++ F Q K +++ +R+LPI
Sbjct: 89 PYHRSKHLALRLDADELLQEARDQMQSQFRHILLVYLDFRQTEKFQRIRKLRQTQRNLPI 148
Query: 292 FKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCTQPRRVAATSVA 351
+ + +L +A+ ++V+I+ G+TG GK+TQ+ QYL + GY + I CTQPRR+A S+
Sbjct: 149 ARFRKDLREALDTSRVVIVAGDTGCGKSTQVPQYLYDFGYRS---IACTQPRRLACVSLC 205
Query: 352 KRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIMLDEA 411
KRVA E G V + IRFE T I ++T+G+LLR++ + NL QY ++LDE
Sbjct: 206 KRVAHELLDDYGSRVAFQIRFERSRTKLTNILFITEGLLLRQLAVAANLDQYDALILDEI 265
Query: 412 HERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFN--CNIFSIPGRTFPVD 469
HER + D L G+ K L++ RP L+LI+ SAT++ E F GYF + +PGR FP+
Sbjct: 266 HERNLFGDFLLGVTKCLLRARPQLKLILMSATINVELFHGYFGEEGARLVQVPGRLFPIK 325
Query: 470 INY 472
+ Y
Sbjct: 326 LRY 328
Score = 44 (20.5 bits), Expect = 2.5e-33, Sum P(2) = 2.5e-33
Identities = 12/21 (57%), Positives = 14/21 (66%)
Query: 743 TRPRE-RQAKADEKRARFFQP 762
TR E RQ KA ++R RF QP
Sbjct: 706 TRHGELRQLKAMKRRQRFEQP 726
>TAIR|locus:2196265 [details] [associations]
symbol:AT1G58060 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
IPI:IPI00533149 RefSeq:NP_176103.2 UniGene:At.27872
ProteinModelPortal:F4I9Q5 SMR:F4I9Q5 PRIDE:F4I9Q5
EnsemblPlants:AT1G58060.1 GeneID:842173 KEGG:ath:AT1G58060
OMA:FLSYKSP Uniprot:F4I9Q5
Length = 1459
Score = 483 (175.1 bits), Expect = 5.6e-74, Sum P(2) = 5.6e-74
Identities = 116/315 (36%), Positives = 170/315 (53%)
Query: 479 DYLDSALITVLQIHVDEP--EGDILLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPV 536
D +D L+ L H+D+ EG IL+FL G EI + L + G L LP+
Sbjct: 895 DRIDYELLEELICHIDDTCEEGAILIFLPGVAEIYMLLDMLAASYRFRGPAADWL--LPL 952
Query: 537 YSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLD 596
+S++ S Q ++F P G RKV+ ATNIAE S+TID + YVID G K+N YNP+++L
Sbjct: 953 HSSIASSEQRKVFLRPPKGLRKVIAATNIAETSITIDDVVYVIDSGKHKENRYNPQKKLS 1012
Query: 597 SLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTM 656
S+V ISQA+A QR GRAGR PG C+ LYT + M P +PE+ R+ LV L +
Sbjct: 1013 SMVEDWISQANARQRTGRAGRVKPGICFSLYTRYRFEKLMRPYQVPEMLRMPLVELCLQI 1072
Query: 657 KAMGINNLLSF--DFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLS 714
K +G+ ++ F ++PPS A+ SA+ L+ +GA++ + LT LG +A+ P+D +
Sbjct: 1073 KLLGLGHIKPFLSRALEPPSEGAMTSAISLLHEVGAVEGDEELTPLGHHLAKLPVDVLIG 1132
Query: 715 KMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQPEG---------- 764
KMLL GC IL+I A + F P++ + D + G
Sbjct: 1133 KMLLYGGIFGCLSPILSIAAFLSYKSPFIYPKDEKQNVDRVKLALLSDNGVSSSDLNNND 1192
Query: 765 ---DHLTLLAVYEAW 776
DHL ++ Y+ W
Sbjct: 1193 RQSDHLLMMVAYDKW 1207
Score = 348 (127.6 bits), Expect = 5.6e-74, Sum P(2) = 5.6e-74
Identities = 84/213 (39%), Positives = 132/213 (61%)
Query: 286 RRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAE----AGYTTKGKIGCTQ 341
R +LPI ++KN ++Q + + VL++ GETGSGKTTQ+ Q++ + +G+ I CTQ
Sbjct: 611 RTALPISEVKNGILQHLKEKDVLVVCGETGSGKTTQVPQFILDDMIDSGHGGYCNIICTQ 670
Query: 342 PRRVAATSVAKRVAEEFGCR----LGEE-VGYAIRFEDCTGPDTVIKYMTDGMLLREILI 396
PRR+AA SVA+RVA+E C L + VGY +R E T + + T G+LLR++
Sbjct: 671 PRRIAAISVAQRVADE-RCESSPGLDDSLVGYQVRLESARSDKTRLLFCTTGILLRKLAG 729
Query: 397 DENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRP-D-----LRLIVTSATLDAERFS 450
D L+ + I++DE HER++ D L +LK L++++ D L++I+ SAT+DA+ FS
Sbjct: 730 DRTLNDVTHIIVDEVHERSLLGDFLLIILKSLIEKQSCDNTSRKLKVILMSATVDADLFS 789
Query: 451 GYFFNCNIFSIPGRTFPVDINYSRQ--EVTDYL 481
YF +C + + GRT PV ++ + E +YL
Sbjct: 790 RYFGHCPVITAQGRTHPVTTHFLEEIYESINYL 822
>UNIPROTKB|B4DVG8 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
InterPro:IPR011709 Pfam:PF07717 HOGENOM:HOG000175261 EMBL:AC009087
UniGene:Hs.151218 HGNC:HGNC:17211 ChiTaRS:DHX38 EMBL:AK301074
IPI:IPI00909589 SMR:B4DVG8 STRING:B4DVG8 Ensembl:ENST00000536867
UCSC:uc010vmp.2 HOVERGEN:HBG093770 Uniprot:B4DVG8
Length = 539
Score = 745 (267.3 bits), Expect = 8.4e-74, P = 8.4e-74
Identities = 136/254 (53%), Positives = 190/254 (74%)
Query: 545 QSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPIS 604
Q++IF+ AP G RK +VATNIAE SLT+DGI +VID G+ K V+NP+ +D+L I PIS
Sbjct: 99 QAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPIS 158
Query: 605 QASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNL 664
QA+A QR+GRAGRTGPG+C+RLYT+SAY++E+ TT+PEIQR NL + L +K++G+ +L
Sbjct: 159 QANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDL 218
Query: 665 LSFDFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLG 724
L F F+DPP ++++M QL+ LGALD G LT G+ M EFPLDP LSKML+ S D+G
Sbjct: 219 LQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMG 278
Query: 725 CSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQPEGDHLTLLAVYEAWKAKNFSLP 784
CS EIL I++M+ IF RP+ R+ ++D+ R +F PE DHLT L VY WK N+S
Sbjct: 279 CSSEILLIVSMLSVPAIFYRPKGREEESDQIREKFAVPESDHLTYLNVYLQWKNNNYSTI 338
Query: 785 WCGENFVNSRSLKK 798
WC ++F+++++++K
Sbjct: 339 WCNDHFIHAKAMRK 352
>UNIPROTKB|G4MZR9 [details] [associations]
symbol:MGG_07059 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR015940 SMART:SM00165 Gene3D:3.10.110.10
InterPro:IPR016135 SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CM001232 SUPFAM:SSF46934 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 RefSeq:XP_003715240.1
ProteinModelPortal:G4MZR9 EnsemblFungi:MGG_07059T0 GeneID:2682944
KEGG:mgr:MGG_07059 Uniprot:G4MZR9
Length = 1404
Score = 459 (166.6 bits), Expect = 1.3e-73, Sum P(2) = 1.3e-73
Identities = 119/343 (34%), Positives = 191/343 (55%)
Query: 470 INYSRQ-EVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEKIKALGKDV 528
INY+ E T+ +D+ ++ + + G IL+FL G EI+ AC L + +
Sbjct: 865 INYNLLVETTEAIDN------ELSLAQKSGGILIFLPGVAEINRACGML--------RSL 910
Query: 529 PELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNV 588
L VLP++++L ++ Q ++F P P G RKVVVATN+AE S+TID I V+D G K+
Sbjct: 911 NCLHVLPLHASLETKEQRKVFVPPPSGKRKVVVATNVAETSITIDDIIVVVDTGKVKETS 970
Query: 589 YNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRIN 648
Y+ + L T S A+ QR GRAGR G+CY+LYT S+M+ PE++R+
Sbjct: 971 YDAANNMRRLEETFASLAACKQRRGRAGRVQAGECYKLYTRKL-ESQMAERPEPEMRRVP 1029
Query: 649 LVHTTLTMKAMGINNLLSF--DFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAE 706
L L+++AMGI ++ F PP A+ A+ L +G LD E L T LG+++A
Sbjct: 1030 LEQLCLSVRAMGIADVRGFLARAPTPPEAAAVEGAITMLRRMGCLDGEEL-TALGRQLAA 1088
Query: 707 FPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGH-IFTRPRERQAKADEKRARFFQPEGD 765
P D K+++ GC ++ +++ A++ +G +F P +++ +A E RARF +GD
Sbjct: 1089 IPADLRCGKLMVYGAVFGCLEDCVSVAALLSSGRGVFVSPPDKRDQAREARARFAAGDGD 1148
Query: 766 HLTLLAVYEAWKA--KNFSLP------WCGENFVNSRSLKKTA 800
LT L ++AW A ++ S+ +C +NF++ +L A
Sbjct: 1149 LLTDLRAFQAWDAMMRDPSVQQRHVRSFCDDNFLSYLTLSDVA 1191
Score = 370 (135.3 bits), Expect = 1.3e-73, Sum P(2) = 1.3e-73
Identities = 82/204 (40%), Positives = 128/204 (62%)
Query: 285 QRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAE----AGYTTKGKIGCT 340
QR+ LP + L++E+++ V ++QV I+ GETGSGK+TQ Q++ + G I T
Sbjct: 629 QRQKLPAWLLRDEIVRTVAEHQVTIIAGETGSGKSTQSVQFILDDLYGRGLGHAANILVT 688
Query: 341 QPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILID--- 397
QPRR++A +A RV++E ++G+EVGY IR E TGP T I ++T G+LLR + +
Sbjct: 689 QPRRISALGLADRVSDERCSQVGQEVGYIIRGESRTGPKTRITFVTTGVLLRRLQVSGGR 748
Query: 398 -----ENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGY 452
+L+ S +++DE HER+++TD L +++ ++K+R DL+L++ SATLD+ F+ Y
Sbjct: 749 VEDVVASLADVSHVVIDEVHERSLDTDFLLSIIRDVLKQRRDLKLVLMSATLDSATFASY 808
Query: 453 FFNCNI----FSIPGRTFPVDINY 472
F I I GRTFPV Y
Sbjct: 809 FVQDGIRVGQVEIAGRTFPVTDYY 832
>UNIPROTKB|Q8TE96 [details] [associations]
symbol:DQX1 "ATP-dependent RNA helicase DQX1" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 HOGENOM:HOG000175261
EMBL:AC005041 HOVERGEN:HBG039428 CTD:165545 KO:K14433 OMA:CGQAVQA
OrthoDB:EOG4548Z3 EMBL:AK074337 EMBL:AK092420 EMBL:BC075018
IPI:IPI00385794 IPI:IPI00843897 IPI:IPI00844595 RefSeq:NP_598376.2
UniGene:Hs.191705 ProteinModelPortal:Q8TE96 SMR:Q8TE96
STRING:Q8TE96 PhosphoSite:Q8TE96 DMDM:145558898 PaxDb:Q8TE96
PRIDE:Q8TE96 Ensembl:ENST00000393951 Ensembl:ENST00000404568
GeneID:165545 KEGG:hsa:165545 UCSC:uc010yrw.2 GeneCards:GC02M074745
H-InvDB:HIX0200286 HGNC:HGNC:20410 HPA:HPA039158 neXtProt:NX_Q8TE96
PharmGKB:PA134916600 InParanoid:Q8TE96 GenomeRNAi:165545
NextBio:88548 ArrayExpress:Q8TE96 Bgee:Q8TE96 CleanEx:HS_DQX1
Genevestigator:Q8TE96 Uniprot:Q8TE96
Length = 717
Score = 742 (266.3 bits), Expect = 1.7e-73, P = 1.7e-73
Identities = 192/525 (36%), Positives = 292/525 (55%)
Query: 284 EQRRSLPIFKLKNELIQAVHDNQ--VLILIGETGSGKTTQLAQYLAEAGYTT---KGKIG 338
+QR++LPI+ + ++ + N V+++ GE GSGK+TQ+ Q+ AE KG++
Sbjct: 40 KQRQALPIWAARFTFLEQLESNPTGVVLVSGEPGSGKSTQIPQWCAEFALARGFQKGQVT 99
Query: 339 CTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDE 398
TQP +AA S+A RVA+E LG EVGY+I EDCTGP+T++++ D +LL+E+
Sbjct: 100 VTQPYPLAARSLALRVADEMDLTLGHEVGYSIPQEDCTGPNTLLRFCWDRLLLQEVASTR 159
Query: 399 NLSQYSVIMLDEAHERTINTDVLFGLLK--QLVKRRPDLRLIVTSATLDAERFSGYFFNC 456
+ V++LDEA ER++ +D L GLL+ +L K DLR++V + + ++ N
Sbjct: 160 GTGAWGVLVLDEAQERSVASDSLQGLLQDARLEKLPGDLRVVVVTDPALEPKLRAFWGNP 219
Query: 457 NIFSIP---G-RTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDF 512
I IP G R P+ Y D +++A VL++ E GD+L+FL +EEI
Sbjct: 220 PIVHIPREPGERPSPI---YWDTIPPDRVEAACQAVLELCRKELPGDVLVFLPSEEEISL 276
Query: 513 ACESLCEKIKALG-KDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLT 571
CESL ++++L + +P V LP++ +Q+ ++E RKVVV +A+ S +
Sbjct: 277 CCESLSREVESLLLQGLPPRV-LPLHPDCGRAVQA-VYEDMD--ARKVVVTHWLADFSFS 332
Query: 572 IDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESA 631
+ I +VID G ++VYNP+ R + V+ PIS+ A R RA PG C LY +S
Sbjct: 333 LPSIQHVIDSGLELRSVYNPRIRAEFQVLRPISKCQAEARRLRARGFPPGSCLCLYPKSF 392
Query: 632 YRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGAL 691
E P P + NL L +K I F+D P+P+AL+ A+E L L AL
Sbjct: 393 LELEAPPLPQPRVCEENLSSLVLLLKRRQIAEPGECHFLDQPAPEALMQALEDLDYLAAL 452
Query: 692 DEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAK 751
D++G L+ LG ++EFPL P L+K LLAS + C DE+LT+ AM+ FTRP +
Sbjct: 453 DDDGDLSDLGVILSEFPLAPELAKALLASCEFDCVDEMLTLAAMLTAAPGFTRPPLSAEE 512
Query: 752 ADEKRARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSL 796
A +RA +GDH +L+ VYEA+ WC +N +L
Sbjct: 513 AALRRA-LEHTDGDHSSLIQVYEAFIQSGADEAWCQARGLNWAAL 556
>UNIPROTKB|F1LSC4 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026 OMA:RAYKGWQ
IPI:IPI00369334 RefSeq:NP_001178836.1 UniGene:Rn.15951
Ensembl:ENSRNOT00000037705 GeneID:366532 KEGG:rno:366532
RGD:1310340 NextBio:689608 ArrayExpress:F1LSC4 Uniprot:F1LSC4
Length = 1391
Score = 465 (168.7 bits), Expect = 2.3e-73, Sum P(3) = 2.3e-73
Identities = 111/315 (35%), Positives = 172/315 (54%)
Query: 496 PEGDILLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPG 555
P G IL+FL G EI E L + V+ P++S+L SE Q +F P G
Sbjct: 851 PPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHSSLSSEEQQAVFVKPPLG 910
Query: 556 GRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRA 615
K++++TNIAE S+TID + YVID G K+ Y+ + ++SL T +SQA+ALQR GRA
Sbjct: 911 VTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLEDTFVSQANALQRKGRA 970
Query: 616 GRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGI---NNLLS-FD-FV 670
GR G C+ L+T Y ++ +PEIQR+ L L +K + + +NL S F +
Sbjct: 971 GRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFSRLI 1030
Query: 671 DPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEIL 730
+PP +L ++ +L LGAL + LT LG +A P+D + K++L C D L
Sbjct: 1031 EPPHVDSLRASKVRLRDLGALTPDEKLTPLGYHLASLPVDVRIGKLMLLGSIFRCLDPAL 1090
Query: 731 TIIAMIQTGHIFTRPRERQAKADEKRARFFQPEGDHLTLLAVYEAWK-----AKNFSLPW 785
TI A + F P +++ +A++K+ F D+L LL Y+ W+ + S +
Sbjct: 1091 TIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSDYLALLCAYKGWQLSTKESARASYNY 1150
Query: 786 CGENFVNSRSLKKTA 800
C +NF++ R+L++ A
Sbjct: 1151 CRQNFLSGRTLQEMA 1165
Score = 370 (135.3 bits), Expect = 2.3e-73, Sum P(3) = 2.3e-73
Identities = 84/206 (40%), Positives = 125/206 (60%)
Query: 270 KAFTFGQRSKL--SIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLA 327
+ F Q S+ +I ++R+ LP ++ + +++ + +QV+++ G TG GKTTQ+ Q++
Sbjct: 527 RQFQMKQASRQFHAILQERQLLPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFIL 586
Query: 328 EAGYTTK----GKIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIK 383
+ I CTQPRR++A SVA+RVA+E R+G VGY IR E T +
Sbjct: 587 DNSLNGPPERVANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLL 646
Query: 384 YMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSAT 443
Y T G+LLR + D L + I++DE HERT +D L +LK +V +R L++I+ SAT
Sbjct: 647 YCTTGVLLRRLEGDATLQGVTHIIVDEVHERTEESDFLLLVLKDIVMQRATLQVILMSAT 706
Query: 444 LDAERFSGYFFNCNIFSIPGRTFPVD 469
LDA FS YF C + +IPGR FPVD
Sbjct: 707 LDAGLFSKYFSYCPVITIPGRAFPVD 732
Score = 37 (18.1 bits), Expect = 2.3e-73, Sum P(3) = 2.3e-73
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 32 KVLAEFISESGRNSETVEIFDDKLKEYGAD 61
KV + + + N E V+ L+E GAD
Sbjct: 99 KVPLQTLHMTSENQEKVKALLRDLQEQGAD 128
>MGI|MGI:2147067 [details] [associations]
symbol:Dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
MGI:MGI:2147067 GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 HOVERGEN:HBG080658 KO:K13026
OMA:RAYKGWQ OrthoDB:EOG4ZS929 EMBL:AK035344 EMBL:AK053628
EMBL:AK162192 EMBL:BC026474 EMBL:BC062952 EMBL:BC065169
EMBL:BC066091 IPI:IPI00420351 IPI:IPI00453609 IPI:IPI00752611
IPI:IPI00753147 IPI:IPI00755243 RefSeq:NP_001157231.1
RefSeq:NP_945180.2 UniGene:Mm.12412 ProteinModelPortal:Q6P5D3
SMR:Q6P5D3 PhosphoSite:Q6P5D3 PaxDb:Q6P5D3 PRIDE:Q6P5D3
Ensembl:ENSMUST00000038166 Ensembl:ENSMUST00000086555 GeneID:106794
KEGG:mmu:106794 UCSC:uc008dqx.2 UCSC:uc008dqy.2 UCSC:uc008dqz.2
UCSC:uc008dra.2 UCSC:uc008drb.1 InParanoid:Q6P5D3 NextBio:358388
Bgee:Q6P5D3 CleanEx:MM_DHX57 Genevestigator:Q6P5D3
GermOnline:ENSMUSG00000035051 Uniprot:Q6P5D3
Length = 1388
Score = 464 (168.4 bits), Expect = 3.1e-73, Sum P(3) = 3.1e-73
Identities = 110/315 (34%), Positives = 172/315 (54%)
Query: 496 PEGDILLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPG 555
P G +L+FL G EI E L + V+ P++S+L SE Q +F P G
Sbjct: 848 PPGAVLVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHSSLSSEEQQAVFVKPPMG 907
Query: 556 GRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRA 615
K++++TNIAE S+TID + YVID G K+ Y+ + ++SL T +SQA+ALQR GRA
Sbjct: 908 VTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLEDTFVSQANALQRKGRA 967
Query: 616 GRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGI---NNLLS-FD-FV 670
GR G C+ L+T Y ++ +PEIQR+ L L +K + + +NL S F +
Sbjct: 968 GRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFSRLI 1027
Query: 671 DPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEIL 730
+PP +L ++ +L LGAL + LT LG +A P+D + K++L C D L
Sbjct: 1028 EPPHIDSLRASKVRLRDLGALTPDEKLTPLGYHLASLPVDVRIGKLMLLGSIFRCLDPAL 1087
Query: 731 TIIAMIQTGHIFTRPRERQAKADEKRARFFQPEGDHLTLLAVYEAWK-----AKNFSLPW 785
TI A + F P +++ +A++K+ F D+L LL Y+ W+ + S +
Sbjct: 1088 TIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSDYLALLCAYKGWQLSTKESARASYNY 1147
Query: 786 CGENFVNSRSLKKTA 800
C +NF++ R+L++ A
Sbjct: 1148 CRQNFLSGRTLQEMA 1162
Score = 370 (135.3 bits), Expect = 3.1e-73, Sum P(3) = 3.1e-73
Identities = 84/206 (40%), Positives = 125/206 (60%)
Query: 270 KAFTFGQRSKL--SIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLA 327
+ F Q S+ +I ++R+ LP ++ + +++ + +QV+++ G TG GKTTQ+ Q++
Sbjct: 524 RQFQMKQASRQFHAILQERQLLPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFIL 583
Query: 328 EAGYTTK----GKIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIK 383
+ I CTQPRR++A SVA+RVA+E R+G VGY IR E T +
Sbjct: 584 DNSLNGPPERVANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLL 643
Query: 384 YMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSAT 443
Y T G+LLR + D L + I++DE HERT +D L +LK +V +R L++I+ SAT
Sbjct: 644 YCTTGVLLRRLEGDATLQGVTHIIVDEVHERTEESDFLLLVLKDIVMQRATLQVILMSAT 703
Query: 444 LDAERFSGYFFNCNIFSIPGRTFPVD 469
LDA FS YF C + +IPGR FPVD
Sbjct: 704 LDAGLFSKYFSYCPVITIPGRAFPVD 729
Score = 37 (18.1 bits), Expect = 3.1e-73, Sum P(3) = 3.1e-73
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 32 KVLAEFISESGRNSETVEIFDDKLKEYGAD 61
KV + + + N E V+ L+E GAD
Sbjct: 96 KVPLQTLHMTSENQEKVKALLRDLQEQGAD 125
>UNIPROTKB|E2QTL7 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
Ensembl:ENSCAFT00000013769 Uniprot:E2QTL7
Length = 988
Score = 402 (146.6 bits), Expect = 5.3e-72, Sum P(3) = 5.3e-72
Identities = 88/208 (42%), Positives = 130/208 (62%)
Query: 280 LSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGK--- 336
+ +Q R LP + ++ EL+ + ++QV ++ GETG GKTTQ+ Q++ + Y +GK
Sbjct: 192 IEMQHFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILD-DYIERGKGSA 250
Query: 337 --IGCTQPRRVAATSVAKRVAEEFG--CRLGEEVGYAIRFED-CTGPDTVIKYMTDGMLL 391
I CTQPRR++A SVA+RVA E C G GY IR + I Y T G++L
Sbjct: 251 CRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIIL 310
Query: 392 REILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSG 451
+ + D +LS S I+LDE HER + +DVL ++K L+ RPDL++I+ SATL+AE+FS
Sbjct: 311 QWLQSDSHLSSVSHIVLDEIHERNLQSDVLMTVIKDLLNFRPDLKVILMSATLNAEKFSE 370
Query: 452 YFFNCNIFSIPGRTFPVDINYSRQEVTD 479
YF NC + IPG TFPV + Y +++ +
Sbjct: 371 YFGNCPMIHIPGFTFPV-VEYLLEDIIE 397
Score = 402 (146.6 bits), Expect = 5.3e-72, Sum P(3) = 5.3e-72
Identities = 92/264 (34%), Positives = 147/264 (55%)
Query: 542 SEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVIT 601
S+ ++F+ PPG RK+V+ATNIAE S+TID + YVID G K+ ++ + + ++
Sbjct: 510 SDTIGQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAE 569
Query: 602 PISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGI 661
+S+A+A QR GRAGR PG CY LY S + +PEI R L L +K + +
Sbjct: 570 WVSKANAKQRKGRAGRVQPGHCYHLYN-GLRASLLDDYQLPEILRTPLEELCLQIKILRL 628
Query: 662 NNLLSF--DFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLA 719
+ F +DPPS +A+ +++ L L ALD++ LT LG +A P++P + KM+L
Sbjct: 629 GGIAYFLSRLMDPPSDEAVSLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILF 688
Query: 720 SVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQP-EGDHLTLLAVYEAWK- 777
C D +LTI A + F P ++ AD +R + + DHLT++ +E W+
Sbjct: 689 GALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARRKELAKDTKSDHLTVVNAFEGWEE 748
Query: 778 AKN----FSLPWCGENFVNSRSLK 797
A+ + +C E F++S +L+
Sbjct: 749 ARRRGFRYEKDYCWEYFLSSNTLQ 772
Score = 54 (24.1 bits), Expect = 5.3e-72, Sum P(3) = 5.3e-72
Identities = 15/45 (33%), Positives = 24/45 (53%)
Query: 479 DYLDSALITVLQIHV--DEPEGDILLFLTGQEEIDFACESLCEKI 521
D +D LI L H+ +E +G IL+FL G + I + L ++
Sbjct: 462 DKVDLNLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQV 506
Score = 46 (21.3 bits), Expect = 8.1e-35, Sum P(3) = 8.1e-35
Identities = 33/138 (23%), Positives = 55/138 (39%)
Query: 190 FKNPEGSLSRTAALQSALTKERREVREQQLRTMIDSIPKDLNRPWEDPMPETGERHLAQE 249
+ +G ++ A Q E RE+Q+ ++ S+ D E A E
Sbjct: 61 YAKKQGQKNKEAERQERAVVHMDERREEQIVQLLHSVQAK-----NDKDSEAQISWFAPE 115
Query: 250 LRGVGLSARDMP-EWKKNAYGKAFTFGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVL 308
G G ++P E K N+ K Q KL QE+R F+++++ I D++ L
Sbjct: 116 DHGYGT---EIPAENKPNSEKKLEN--QEKKLISQEKRT----FRIRDKYID--RDSEYL 164
Query: 309 ILIGETGSGKTTQLAQYL 326
+ E QL + L
Sbjct: 165 LQENEPDVALDQQLLEDL 182
Score = 39 (18.8 bits), Expect = 4.3e-34, Sum P(3) = 4.3e-34
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 391 LREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLI 438
+R+ ID + S+Y +L E +E + D LL+ L K++ DLR I
Sbjct: 152 IRDKYIDRD-SEY---LLQE-NEPDVALDQQ--LLEDLRKKKSDLRYI 192
>FB|FBgn0032883 [details] [associations]
symbol:CG9323 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0002151 "G-quadruplex RNA binding"
evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0002151
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GeneTree:ENSGT00550000074257 KO:K14442 EMBL:AY095176
RefSeq:NP_610056.1 UniGene:Dm.11353 SMR:Q8SWT2 MINT:MINT-935813
EnsemblMetazoa:FBtr0081459 GeneID:35339 KEGG:dme:Dmel_CG9323
UCSC:CG9323-RA FlyBase:FBgn0032883 InParanoid:Q8SWT2 OMA:PLGMHLA
OrthoDB:EOG4HQC07 GenomeRNAi:35339 NextBio:793041 Uniprot:Q8SWT2
Length = 942
Score = 415 (151.1 bits), Expect = 6.1e-72, Sum P(2) = 6.1e-72
Identities = 106/318 (33%), Positives = 169/318 (53%)
Query: 488 VLQIHVDEPEGDILLFLTGQEEIDFACESLCEKIKALGKDVPE-LVVLPVYSALPSEIQS 546
V I +EPEG IL+FL G ++I L + + G+ + + V P++S + S Q
Sbjct: 413 VYYICENEPEGAILVFLPGYDKISQLYNILDKPKTSKGQRWRDHMAVFPLHSLMQSGEQQ 472
Query: 547 RIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQA 606
+F P G RKV+++T IAE S+TID + YVI+ G K Y+ + + SL +++A
Sbjct: 473 AVFRRPPAGQRKVIISTIIAETSVTIDDVVYVINSGRTKATNYDIETNIQSLDEVWVTKA 532
Query: 607 SALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLS 666
+ QR GRAGR PG CY L++ A M PEI R L L++K + I++
Sbjct: 533 NTQQRRGRAGRVRPGICYNLFSR-AREDRMDDIPTPEILRSKLESIILSLKLLHIDDPYR 591
Query: 667 F--DFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLG 724
F ++ P+P+A+ +E L + ALD+ G LT LG +A+ P+DP + KM+L S
Sbjct: 592 FLQTLINAPNPEAIKMGVELLKRIEALDQTGTLTPLGMHLAKLPIDPQMGKMILMSALFC 651
Query: 725 CSDEILTIIAMIQTGHIFTRPRERQAKADE-KRARFFQPEGDHLTLLAVYEAWKAKNFS- 782
C D I + A + F P ++++ DE KR DHL + A++ +S
Sbjct: 652 CLDPITSAAAALSFKSPFYSPLGKESRVDEIKRRMARNMRSDHLMVHNTIIAYRDSRYSH 711
Query: 783 --LPWCGENFVNSRSLKK 798
+C +NF++S +L++
Sbjct: 712 AERDFCYKNFLSSMTLQQ 729
Score = 395 (144.1 bits), Expect = 6.1e-72, Sum P(2) = 6.1e-72
Identities = 84/194 (43%), Positives = 123/194 (63%)
Query: 284 EQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAE----AGYTTKGKIGC 339
E R+ LP K +++IQAV +NQV++++G TG GKTTQ+ Q L + G + +I C
Sbjct: 148 EARKKLPTMKYADDIIQAVRENQVILIVGSTGCGKTTQVPQILLDDAISRGCASSCRIIC 207
Query: 340 TQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTV-IKYMTDGMLLREILIDE 398
TQPRR++A ++A+ V+ E LG VGY IR E + I Y T G+LL+++ D
Sbjct: 208 TQPRRISAIAIAEWVSYERCESLGNSVGYQIRLESRKARERASITYCTTGVLLQQLQSDP 267
Query: 399 NLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNI 458
+ SV++LDE HER++ TD+L GLLK ++ RPDL++I+ SAT+ + F YF NC +
Sbjct: 268 LMHNLSVLILDEIHERSVETDLLMGLLKVILPHRPDLKVILMSATVREQDFCDYFNNCPM 327
Query: 459 FSIPGRTFPVDINY 472
F I G FPV + Y
Sbjct: 328 FRIEGVMFPVKMLY 341
Score = 45 (20.9 bits), Expect = 7.2e-33, Sum P(2) = 7.2e-33
Identities = 19/68 (27%), Positives = 36/68 (52%)
Query: 481 LDSALITVLQIHVDEPEGDI--LLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPVYS 538
L+S ++++ +H+D+P + L+ E I E L ++I+AL + L L ++
Sbjct: 574 LESIILSLKLLHIDDPYRFLQTLINAPNPEAIKMGVE-LLKRIEALDQ-TGTLTPLGMHL 631
Query: 539 A-LPSEIQ 545
A LP + Q
Sbjct: 632 AKLPIDPQ 639
>RGD|1359618 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1359618 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT
OrthoDB:EOG48PMJH EMBL:BC083821 IPI:IPI00369962
RefSeq:NP_001005873.1 UniGene:Rn.29182 ProteinModelPortal:Q5XI69
PhosphoSite:Q5XI69 Ensembl:ENSRNOT00000006926 GeneID:287595
KEGG:rno:287595 InParanoid:Q5XI69 NextBio:626568
ArrayExpress:Q5XI69 Genevestigator:Q5XI69
GermOnline:ENSRNOG00000004549 Uniprot:Q5XI69
Length = 779
Score = 725 (260.3 bits), Expect = 1.1e-71, P = 1.1e-71
Identities = 151/384 (39%), Positives = 235/384 (61%)
Query: 431 RRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPVDINYSR------QEVTDYLDSA 484
R+ L+++V SAT++ + S +F NC IF IPGR +PV + +E T Y+ +
Sbjct: 200 RKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAI 259
Query: 485 LITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEKIKALGKD--VPE-----LVVLPVY 537
+ + IH++E GDIL+FLTGQ EI+ +CE L + +++ D V + L++LP Y
Sbjct: 260 VKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCY 319
Query: 538 SALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDS 597
++ ++ Q RIF P PPG RK V++TNI+ SLTIDGI YV+D GF KQ +NP+ LD
Sbjct: 320 GSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDI 379
Query: 598 LVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMK 657
L + PIS++ ALQR+GRAGRT GKC+R+Y++ + M IPEI+R +L LT+K
Sbjct: 380 LEVVPISKSEALQRSGRAGRTASGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLK 439
Query: 658 AMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLSKML 717
+ I++++ F ++DPP+ + ++ A++QLY A+D G +T+LG M EFPL P L+ +
Sbjct: 440 CLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAV 499
Query: 718 LASVDLGCSDEILTIIAMIQTGHIFTRP--RERQAKADEKRARFFQPEG---DHLTLLAV 772
+ + L C D +L I AM+ ++F RP E Q +A++K G D TL +
Sbjct: 500 IRAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQKHRELAAKAGGFNDFATLAVI 559
Query: 773 YEAWKAKNFSLPWCGENFVNSRSL 796
+E K+ WC +++++ R L
Sbjct: 560 FEQCKSSGAPASWCQKHWIHWRCL 583
Score = 632 (227.5 bits), Expect = 7.9e-62, P = 7.9e-62
Identities = 129/251 (51%), Positives = 176/251 (70%)
Query: 288 SLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCTQPRRVAA 347
+ PI K + +LIQAV DN LI+ G TGSGKTTQL +YL EAG++ G IG TQPR+VAA
Sbjct: 52 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAA 111
Query: 348 TSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIM 407
SVA+RVAEE C LG +VGY +RF+DC+ +T IKYMTDG LL+ IL D NL+++SVI+
Sbjct: 112 ISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLNKFSVII 171
Query: 408 LDEAHERTINTDVLFGLLKQLVK-----RRPDLRLIVTSATLDAERFSGYFFNCNIFSIP 462
LDEAHERT+ TD+LFGLLK+L + R+ L+++V SAT++ + S +F NC IF IP
Sbjct: 172 LDEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIP 231
Query: 463 GRTFPVDINYSR------QEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACES 516
GR +PV + +E T Y+ + + + IH++E GDIL+FLTGQ EI+ +CE
Sbjct: 232 GRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCEL 291
Query: 517 LCEKIKALGKD 527
L + +++ D
Sbjct: 292 LFQMAESVDYD 302
>MGI|MGI:2145374 [details] [associations]
symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box polypeptide 29"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2145374
GO:GO:0005739 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 CTD:54505 HOGENOM:HOG000247063
HOVERGEN:HBG081436 OMA:WLLYQEK OrthoDB:EOG43FGW2 EMBL:BC057112
EMBL:BC082319 EMBL:AK028342 EMBL:AK042066 EMBL:AK042497
EMBL:AK049530 IPI:IPI00410936 RefSeq:NP_766182.2 UniGene:Mm.35094
ProteinModelPortal:Q6PGC1 SMR:Q6PGC1 STRING:Q6PGC1
PhosphoSite:Q6PGC1 PaxDb:Q6PGC1 PRIDE:Q6PGC1
Ensembl:ENSMUST00000038574 GeneID:218629 KEGG:mmu:218629
UCSC:uc007rwx.1 GeneTree:ENSGT00550000074257 InParanoid:Q6PGC1
NextBio:376359 Bgee:Q6PGC1 CleanEx:MM_DHX29 Genevestigator:Q6PGC1
GermOnline:ENSMUSG00000042426 Uniprot:Q6PGC1
Length = 1365
Score = 420 (152.9 bits), Expect = 1.2e-71, Sum P(2) = 1.2e-71
Identities = 114/328 (34%), Positives = 173/328 (52%)
Query: 485 LITVLQIHVDE-P-----EGDILLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPVYS 538
LI L +++D+ P EG +L+FL G I + L + + V+ ++S
Sbjct: 848 LILELLVYLDKSPQFRNIEGAVLIFLPGLAHIQQLYDLLSSDRRFYSE---RYQVIALHS 904
Query: 539 ALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSL 598
L ++ Q+ F PPG RK+V+ATNIAE +TI + +VID G K+N Y+ ++ SL
Sbjct: 905 VLSTQDQAAAFMFPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSL 964
Query: 599 VITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTL-TMK 657
V T +S+ASALQR GRAGR G C+RLYT + + ++PEI R+ L L MK
Sbjct: 965 VETFVSKASALQRQGRAGRVRDGFCFRLYTRERFEGFLD-YSVPEILRVPLEELCLHIMK 1023
Query: 658 A-MGI-NNLLSFDFVDPPSPQALISAMEQLYSLGALD-EEGLLTKLGKKMAEFPLDPPLS 714
+G + LS +DPP Q + +AM L +GA + E LT LG+ +A P++ +
Sbjct: 1024 CDLGSPEDFLS-KALDPPQLQVISNAMNLLRKIGACEPNEPKLTPLGQHLAALPVNVKIG 1082
Query: 715 KMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQPEGDHLTLLAVYE 774
KML+ GC + + T+ A++ F P R+ +AD ++ + DHLT+ Y
Sbjct: 1083 KMLIFGAIFGCLEPVATLAAVMTEKSPFITPIGRKDEADLAKSSLAVADSDHLTIYNAYL 1142
Query: 775 AWKAKN----F--SLPWCGENFVNSRSL 796
WK F + +C NF+N SL
Sbjct: 1143 GWKKAQQEGGFRSEISYCQRNFLNRTSL 1170
Score = 393 (143.4 bits), Expect = 1.2e-71, Sum P(2) = 1.2e-71
Identities = 99/292 (33%), Positives = 168/292 (57%)
Query: 194 EGSLSRTAALQSALTKERREVREQQLRTMIDSIPKDLNRPWEDPMPETGERHLAQE-LRG 252
E + R + L K +++ ++QQ + P+ EDP E+ E ++ E L
Sbjct: 481 ETNKPRDLFIAKLLNKLKQQQQQQQQQR-----PESEKGGSEDP-EESWENLVSDEDLAA 534
Query: 253 VGL---SARDMPEWKKNAYGKAFTFGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLI 309
+ L SA D+ ++ + + + + +L ++R+ LP+FK ++ +++ + ++V++
Sbjct: 535 LSLEPTSAEDLAP-VRSLFRRLQSTPKYQRLL--KERQQLPVFKHRDSIVETLKRHRVVV 591
Query: 310 LIGETGSGKTTQLAQYLAE------AGYTTKGKIGCTQPRRVAATSVAKRVAEEFGCRLG 363
+ GETGSGK+TQ+ +L E G K I CTQPRR++A S+A RV EE GC G
Sbjct: 592 VAGETGSGKSTQVPHFLLEDLLLDECG-ARKCNIVCTQPRRISAVSLATRVCEELGCESG 650
Query: 364 EE-----VGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINT 418
GY IR E T + Y T G+LLR++ D L+ S +++DE HER++ +
Sbjct: 651 PGGRNSLCGYQIRMESRASESTRLLYCTTGVLLRKLQEDGLLADVSHVIVDEVHERSVQS 710
Query: 419 DVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPVDI 470
D L +LK+++++R DL LI+ SAT+D+++FS YF +C I I GR++PV++
Sbjct: 711 DFLLVILKEILQKRSDLHLILMSATVDSDKFSTYFTHCPILRISGRSYPVEV 762
Score = 51 (23.0 bits), Expect = 1.2e-32, Sum P(2) = 1.2e-32
Identities = 60/259 (23%), Positives = 100/259 (38%)
Query: 472 YSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEKIKALGKDVPEL 531
Y+R+ +LD ++ +L++ ++E I+ G E DF ++L D P+L
Sbjct: 993 YTRERFEGFLDYSVPEILRVPLEELCLHIMKCDLGSPE-DFLSKAL---------DPPQL 1042
Query: 532 VVLPVYSALPSEIQS-RIFEP--APPGGRKVVVATNIAEASLTIDG-IFYVIDPGFAKQN 587
V+ L +I + EP P G + N+ + I G IF ++P
Sbjct: 1043 QVISNAMNLLRKIGACEPNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLEPVATLAA 1102
Query: 588 VYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYT----------ESAYRSEMS 637
V K S ITPI + A + +Y E +RSE+S
Sbjct: 1103 VMTEK----SPFITPIGRKDEADLAKSSLAVADSDHLTIYNAYLGWKKAQQEGGFRSEIS 1158
Query: 638 PTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPS------PQALISAMEQLYSLGAL 691
+ R +L+ T +K + + + F PS PQ L + + + L A+
Sbjct: 1159 YCQRNFLNRTSLL-TLEDVKQELMKLVKAAGFSSSPSWEGRKGPQTL--SFQDIALLKAV 1215
Query: 692 DEEGLLTKLGKKMAEFPLD 710
GL +GK M +D
Sbjct: 1216 LAAGLYDSVGKIMCTKSVD 1234
Score = 40 (19.1 bits), Expect = 1.6e-34, Sum P(2) = 1.6e-34
Identities = 12/45 (26%), Positives = 23/45 (51%)
Query: 8 RELTYLSLLSKICSEL--ETHLGFIDKVLAEFISESGRNSETVEI 50
R ++ +SL +++C EL E+ G + + I R SE+ +
Sbjct: 630 RRISAVSLATRVCEELGCESGPGGRNSLCGYQIRMESRASESTRL 674
>WB|WBGene00015525 [details] [associations]
symbol:rha-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0008340 "determination
of adult lifespan" evidence=IMP] [GO:0016246 "RNA interference"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0071688 "striated muscle myosin thick filament
assembly" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0006898 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0016246 GO:GO:0071688 GO:GO:0000003 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 HOGENOM:HOG000201240 KO:K14780
OMA:AKLQPRT EMBL:FO080280 PIR:H88533 RefSeq:NP_498895.1
UniGene:Cel.10874 ProteinModelPortal:P34305 SMR:P34305
IntAct:P34305 STRING:P34305 PaxDb:P34305 EnsemblMetazoa:C06E1.10
GeneID:176207 KEGG:cel:CELE_C06E1.10 UCSC:C06E1.10 CTD:176207
WormBase:C06E1.10 InParanoid:P34305 NextBio:891582 Uniprot:P34305
Length = 1148
Score = 468 (169.8 bits), Expect = 1.3e-71, Sum P(2) = 1.3e-71
Identities = 103/244 (42%), Positives = 155/244 (63%)
Query: 276 QRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKG 335
+RSK IQ+ R LPIF + +++A+++N V ++ GETGSGKTTQ+ Q+L EAGY ++G
Sbjct: 224 ERSK-EIQKSRAELPIFAEEMRIVEAINENLVTVVCGETGSGKTTQIPQFLYEAGYASEG 282
Query: 336 K-IGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREI 394
+ IG T+PRRVAA ++A+RV E +EV Y IR+E T I +MTDG+L++E+
Sbjct: 283 ELIGITEPRRVAAIAMAQRVGVELA--KPDEVSYQIRYEGTRSETTNILFMTDGVLMKEM 340
Query: 395 LIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPD----LRLIVTSATLDAERFS 450
D L +YSVI++DEAHER++ +DVL G+L ++V R LRL++ SATL + F+
Sbjct: 341 EQDVMLKKYSVILIDEAHERSMYSDVLIGMLSRIVPLRSKTARPLRLVIMSATLRLDDFT 400
Query: 451 GY----FFNCNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTG 506
+ + R FPV +++ ++ DY+ SA +IH P G IL+F+TG
Sbjct: 401 HKKLFPLLTPKVIKVDARQFPVSVHFEKRTPDDYIASAFRKTCRIHETLPPGAILVFVTG 460
Query: 507 QEEI 510
Q E+
Sbjct: 461 QHEV 464
Score = 338 (124.0 bits), Expect = 1.3e-71, Sum P(2) = 1.3e-71
Identities = 83/217 (38%), Positives = 116/217 (53%)
Query: 527 DVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQ 586
D L LP+YS L Q R+F+ P G R V++TN+AE SLTI G+ YVID GF K+
Sbjct: 571 DCEPLYCLPLYSLLSMGKQRRVFDETPAGMRLCVISTNVAETSLTIPGVKYVIDGGFEKR 630
Query: 587 NVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQR 646
+Y+ + + ISQAS QRAGRAGR G YRLY+ + Y+ + PEI
Sbjct: 631 RLYDSITGVSRFAVCRISQASGDQRAGRAGRISAGHAYRLYSSAVYQ-DFVKFADPEILS 689
Query: 647 INLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDE-------EGLLTK 699
L +K+M I +++F F P Q L SA ++L LGAL E E +TK
Sbjct: 690 KPADQLVLHLKSMNIVKVVNFPFPSAPDEQMLESAEKRLCRLGALSESTKNGKTEARITK 749
Query: 700 LGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMI 736
LGK +A FPL P +K + + + +I+++
Sbjct: 750 LGKTLAVFPLAPSYAKFIAMADQHNLMSHAILLISLL 786
>TAIR|locus:2009200 [details] [associations]
symbol:NIH "nuclear DEIH-boxhelicase" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003678
"DNA helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006259 "DNA metabolic process" evidence=ISS]
InterPro:IPR002110 InterPro:IPR001374 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0008026 IPI:IPI00521146 RefSeq:NP_172152.1 UniGene:At.20810
PRIDE:F4IDQ6 EnsemblPlants:AT1G06670.1 GeneID:837177
KEGG:ath:AT1G06670 OMA:GNMEENT Uniprot:F4IDQ6
Length = 1576
Score = 441 (160.3 bits), Expect = 1.5e-71, Sum P(4) = 1.5e-71
Identities = 113/332 (34%), Positives = 180/332 (54%)
Query: 481 LDSALITVL--QIHVDEPEGDILLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPVYS 538
+D LI L +I D +G IL+FL G EEI E L + + + ++L ++S
Sbjct: 557 VDVGLIVKLMKKICSDSKDGAILVFLPGWEEISKTKEKLLDD-RFFAHSA-KFIILCLHS 614
Query: 539 ALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSL 598
+P+E Q ++F P G RK+V+ATNIAE+++TID + YVID G K+ Y+P + +L
Sbjct: 615 RVPAEEQKKVFNRPPRGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNDVSTL 674
Query: 599 VITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPT-TIPEIQRINLVHTTLTMK 657
+ +S+A+A QRAGRAGR G CY LY S R+ P +PE+ R+ + L +K
Sbjct: 675 QSSWVSKANAKQRAGRAGRCQAGICYHLY--SKLRAASLPEYRVPEVMRMPVDELCLQVK 732
Query: 658 AMGIN-NLLSF--DFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLS 714
+ N N+ F +DPP Q++ +A+ L +GAL E LT+LG+K + P+ P +S
Sbjct: 733 MLDPNCNVNDFLQKLMDPPVAQSIENALIILKDIGALTPEEELTELGQKFGQLPVHPRIS 792
Query: 715 KMLLASVDLGCSDEILTIIAMIQTGHIFTRP-----RERQAKADEKRARFFQPEGDHLTL 769
KM+ ++ + C D L + FT P R++ A A + A + DHL
Sbjct: 793 KMIYFAILVNCLDPALILACAADEKDPFTMPLSPGDRKKAAAAKHELASLYGDHSDHLAT 852
Query: 770 LAVYEAWK---AKNFSLPWCGENFVNSRSLKK 798
+A ++ WK A + +C + F++ +K+
Sbjct: 853 VAAFQCWKNAKASGQAKEFCSKYFISQVVMKR 884
Score = 388 (141.6 bits), Expect = 1.5e-71, Sum P(4) = 1.5e-71
Identities = 83/199 (41%), Positives = 126/199 (63%)
Query: 276 QRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKG 335
+R I E R LPI ++ +I AV NQV+++ GETG GKTTQ+ QYL + + +K
Sbjct: 204 ERHFREIFEARSKLPIASFRDAIISAVESNQVVLIAGETGCGKTTQVPQYLLDHMWHSKK 263
Query: 336 ---KIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLR 392
KI CTQPRR++A SV+ R++ E G +G VGY +R + G ++ + + T+G+LLR
Sbjct: 264 EACKIICTQPRRISAISVSDRISWERGETIGRTVGYKVRLQSEGGRESSVVFCTNGILLR 323
Query: 393 EIL---IDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERF 449
++ ++ ++ + I++DE HER +D + +L+ L+ P LRLI+ SATLDAERF
Sbjct: 324 VLIGKGVNSSVPDITHIIVDEIHERDSYSDFMLMILRDLLPSNPHLRLILMSATLDAERF 383
Query: 450 SGYFFNCNIFSIPGRTFPV 468
S YF C + +PG T+PV
Sbjct: 384 SEYFGGCPVVRVPGFTYPV 402
Score = 38 (18.4 bits), Expect = 1.5e-71, Sum P(4) = 1.5e-71
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 273 TFGQRSKLSIQEQRRSLPIFK 293
T G RSK + + R L +FK
Sbjct: 56 TMGLRSKSNGSGEERRLSLFK 76
Score = 37 (18.1 bits), Expect = 1.5e-71, Sum P(4) = 1.5e-71
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 188 KVFKNPEGSLSRTAALQSALTKERREVREQQLRTM 222
KV ++ S + + + LT R + Q RTM
Sbjct: 23 KVLEDFRASGNDSYVFEQQLTNSERGIIHQMCRTM 57
>UNIPROTKB|Q08DS9 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104421 CTD:79665
OMA:LYGSMPT EMBL:DAAA02048338 EMBL:BC123581 IPI:IPI00715479
RefSeq:NP_001070365.1 UniGene:Bt.63706 Ensembl:ENSBTAT00000023753
GeneID:533484 KEGG:bta:533484 InParanoid:Q08DS9 NextBio:20876051
Uniprot:Q08DS9
Length = 779
Score = 722 (259.2 bits), Expect = 2.3e-71, P = 2.3e-71
Identities = 150/384 (39%), Positives = 235/384 (61%)
Query: 431 RRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPVDINYSR------QEVTDYLDSA 484
R+ L+++V SAT++ + S +F NC IF IPGR +PV + +E T Y+ +
Sbjct: 200 RKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAI 259
Query: 485 LITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEKIKALGKD--VPE-----LVVLPVY 537
+ + IH++E GDIL+FLTGQ EI+ +CE L + +++ D V + L++LP Y
Sbjct: 260 VKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCY 319
Query: 538 SALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDS 597
++ ++ Q RIF P PPG RK V++TNI+ SLTIDGI YV+D GF KQ +NP+ LD
Sbjct: 320 GSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDI 379
Query: 598 LVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMK 657
L + PIS++ ALQR+GRAGRT GKC+R+Y++ + M IPEI+R +L LT+K
Sbjct: 380 LEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLK 439
Query: 658 AMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLSKML 717
+ I++++ F ++DPP+ + ++ A++QLY A+D G +T+LG M EFPL P L+ +
Sbjct: 440 CLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAV 499
Query: 718 LASVDLGCSDEILTIIAMIQTGHIFTRP--RERQAKADEKRARFFQPEG---DHLTLLAV 772
+ + L C D +L I AM+ ++F RP E Q +A+++ G D TL +
Sbjct: 500 IKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVI 559
Query: 773 YEAWKAKNFSLPWCGENFVNSRSL 796
+E K+ WC +++++ R L
Sbjct: 560 FEQCKSSGAPASWCQKHWIHWRCL 583
Score = 634 (228.2 bits), Expect = 4.8e-62, P = 4.8e-62
Identities = 138/287 (48%), Positives = 191/287 (66%)
Query: 254 GLSARDMPEWKKNAYGKAFTFGQRSKLSIQE--QRRSLPIFKLKNELIQAVHDNQVLILI 311
G +RD+ E + +A G ++ S QE + PI K + +LIQAV DN LI+
Sbjct: 18 GERSRDLQEERPSA-GSVADREEKGCTS-QEGGTTPTFPIQKQRKKLIQAVRDNSFLIVT 75
Query: 312 GETGSGKTTQLAQYLAEAGYTTKGKIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIR 371
G TGSGKTTQL +YL EAG++ G IG TQPR+VAA SVA+RVAEE C LG +VGY +R
Sbjct: 76 GNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVR 135
Query: 372 FEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVK- 430
F+DC+ +T IKYMTDG LL+ IL D NL+++SVI+LDEAHERT+ TD+LFGLLK+L +
Sbjct: 136 FDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQE 195
Query: 431 ----RRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPVDINYSR------QEVTDY 480
R+ L+++V SAT++ + S +F NC IF IPGR +PV + +E T Y
Sbjct: 196 KSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAY 255
Query: 481 LDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEKIKALGKD 527
+ + + + IH++E GDIL+FLTGQ EI+ +CE L + +++ D
Sbjct: 256 IQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYD 302
>UNIPROTKB|F1S235 [details] [associations]
symbol:LOC100519272 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:CU694896
RefSeq:XP_003131712.1 Ensembl:ENSSSCT00000019229 GeneID:100519272
KEGG:ssc:100519272 Uniprot:F1S235
Length = 779
Score = 722 (259.2 bits), Expect = 2.3e-71, P = 2.3e-71
Identities = 150/384 (39%), Positives = 235/384 (61%)
Query: 431 RRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPVDINYSR------QEVTDYLDSA 484
R+ L+++V SAT++ + S +F NC IF IPGR +PV + +E T Y+ +
Sbjct: 200 RKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAI 259
Query: 485 LITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEKIKALGKD--VPE-----LVVLPVY 537
+ + IH++E GDIL+FLTGQ EI+ +CE L + +++ D V + L++LP Y
Sbjct: 260 VKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCY 319
Query: 538 SALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDS 597
++ ++ Q RIF P PPG RK V++TNI+ SLTIDGI YV+D GF KQ +NP+ LD
Sbjct: 320 GSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDI 379
Query: 598 LVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMK 657
L + PIS++ ALQR+GRAGRT GKC+R+Y++ + M IPEI+R +L LT+K
Sbjct: 380 LEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLK 439
Query: 658 AMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLSKML 717
+ I++++ F ++DPP+ + ++ A++QLY A+D G +T+LG M EFPL P L+ +
Sbjct: 440 CLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAV 499
Query: 718 LASVDLGCSDEILTIIAMIQTGHIFTRP--RERQAKADEKRARFFQPEG---DHLTLLAV 772
+ + L C D +L I AM+ ++F RP E Q +A+++ G D TL +
Sbjct: 500 IKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVI 559
Query: 773 YEAWKAKNFSLPWCGENFVNSRSL 796
+E K+ WC +++++ R L
Sbjct: 560 FEQCKSSGAPASWCQKHWIHWRCL 583
Score = 634 (228.2 bits), Expect = 4.8e-62, P = 4.8e-62
Identities = 137/289 (47%), Positives = 189/289 (65%)
Query: 254 GLSARDMPEWKKNAYGKAFTFGQRSKLSIQEQRR----SLPIFKLKNELIQAVHDNQVLI 309
G +RD+ E + +A T R + Q + PI K + +LIQAV DN LI
Sbjct: 18 GERSRDLQEERPSAV----TIADREEKGCTSQEGGTTPTFPIQKQRKKLIQAVRDNSFLI 73
Query: 310 LIGETGSGKTTQLAQYLAEAGYTTKGKIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYA 369
+ G TGSGKTTQL +YL EAG++ G IG TQPR+VAA SVA+RVAEE C LG +VGY
Sbjct: 74 VTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQ 133
Query: 370 IRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLV 429
+RF+DC+ +T IKYMTDG LL+ IL D NL+++SVI+LDEAHERT+ TD+LFGLLK+L
Sbjct: 134 VRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLF 193
Query: 430 K-----RRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPVDINYSR------QEVT 478
+ R+ L+++V SAT++ + S +F NC IF IPGR +PV + +E T
Sbjct: 194 QEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENT 253
Query: 479 DYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEKIKALGKD 527
Y+ + + + IH++E GDIL+FLTGQ EI+ +CE L + +++ D
Sbjct: 254 AYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYD 302
>UNIPROTKB|E2RPC8 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AAEX03006584 EMBL:AAEX03006585
Ensembl:ENSCAFT00000027962 Uniprot:E2RPC8
Length = 781
Score = 722 (259.2 bits), Expect = 2.3e-71, P = 2.3e-71
Identities = 150/384 (39%), Positives = 235/384 (61%)
Query: 431 RRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPVDINYSR------QEVTDYLDSA 484
R+ L+++V SAT++ + S +F NC IF IPGR +PV + +E T Y+ +
Sbjct: 200 RKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAI 259
Query: 485 LITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEKIKALGKD--VPE-----LVVLPVY 537
+ + IH++E GDIL+FLTGQ EI+ +CE L + +++ D V + L++LP Y
Sbjct: 260 VKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCY 319
Query: 538 SALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDS 597
++ ++ Q RIF P PPG RK V++TNI+ SLTIDGI YV+D GF KQ +NP+ LD
Sbjct: 320 GSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDI 379
Query: 598 LVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMK 657
L + PIS++ ALQR+GRAGRT GKC+R+Y++ + M IPEI+R +L LT+K
Sbjct: 380 LEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLK 439
Query: 658 AMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLSKML 717
+ I++++ F ++DPP+ + ++ A++QLY A+D G +T+LG M EFPL P L+ +
Sbjct: 440 CLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAV 499
Query: 718 LASVDLGCSDEILTIIAMIQTGHIFTRP--RERQAKADEKRARFFQPEG---DHLTLLAV 772
+ + L C D +L I AM+ ++F RP E Q +A+++ G D TL +
Sbjct: 500 IKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVI 559
Query: 773 YEAWKAKNFSLPWCGENFVNSRSL 796
+E K+ WC +++++ R L
Sbjct: 560 FEQCKSSGAPASWCQKHWIHWRCL 583
Score = 632 (227.5 bits), Expect = 7.9e-62, P = 7.9e-62
Identities = 129/251 (51%), Positives = 176/251 (70%)
Query: 288 SLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCTQPRRVAA 347
+ PI K + +LIQAV DN LI+ G TGSGKTTQL +YL EAG++ G IG TQPR+VAA
Sbjct: 52 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAA 111
Query: 348 TSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIM 407
SVA+RVAEE C LG +VGY +RF+DC+ +T IKYMTDG LL+ IL D NL+++SVI+
Sbjct: 112 ISVAQRVAEEMKCALGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVII 171
Query: 408 LDEAHERTINTDVLFGLLKQLVK-----RRPDLRLIVTSATLDAERFSGYFFNCNIFSIP 462
LDEAHERT+ TD+LFGLLK+L + R+ L+++V SAT++ + S +F NC IF IP
Sbjct: 172 LDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIP 231
Query: 463 GRTFPVDINYSR------QEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACES 516
GR +PV + +E T Y+ + + + IH++E GDIL+FLTGQ EI+ +CE
Sbjct: 232 GRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCEL 291
Query: 517 LCEKIKALGKD 527
L + +++ D
Sbjct: 292 LFQMAESVDYD 302
>UNIPROTKB|J9NVQ3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AAEX03006584
EMBL:AAEX03006585 Ensembl:ENSCAFT00000048714 Uniprot:J9NVQ3
Length = 857
Score = 722 (259.2 bits), Expect = 2.3e-71, P = 2.3e-71
Identities = 150/384 (39%), Positives = 235/384 (61%)
Query: 431 RRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPVDINYSR------QEVTDYLDSA 484
R+ L+++V SAT++ + S +F NC IF IPGR +PV + +E T Y+ +
Sbjct: 278 RKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAI 337
Query: 485 LITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEKIKALGKD--VPE-----LVVLPVY 537
+ + IH++E GDIL+FLTGQ EI+ +CE L + +++ D V + L++LP Y
Sbjct: 338 VKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCY 397
Query: 538 SALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDS 597
++ ++ Q RIF P PPG RK V++TNI+ SLTIDGI YV+D GF KQ +NP+ LD
Sbjct: 398 GSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDI 457
Query: 598 LVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMK 657
L + PIS++ ALQR+GRAGRT GKC+R+Y++ + M IPEI+R +L LT+K
Sbjct: 458 LEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLK 517
Query: 658 AMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLSKML 717
+ I++++ F ++DPP+ + ++ A++QLY A+D G +T+LG M EFPL P L+ +
Sbjct: 518 CLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAV 577
Query: 718 LASVDLGCSDEILTIIAMIQTGHIFTRP--RERQAKADEKRARFFQPEG---DHLTLLAV 772
+ + L C D +L I AM+ ++F RP E Q +A+++ G D TL +
Sbjct: 578 IKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVI 637
Query: 773 YEAWKAKNFSLPWCGENFVNSRSL 796
+E K+ WC +++++ R L
Sbjct: 638 FEQCKSSGAPASWCQKHWIHWRCL 661
Score = 632 (227.5 bits), Expect = 7.9e-62, P = 7.9e-62
Identities = 129/251 (51%), Positives = 176/251 (70%)
Query: 288 SLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCTQPRRVAA 347
+ PI K + +LIQAV DN LI+ G TGSGKTTQL +YL EAG++ G IG TQPR+VAA
Sbjct: 130 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAA 189
Query: 348 TSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIM 407
SVA+RVAEE C LG +VGY +RF+DC+ +T IKYMTDG LL+ IL D NL+++SVI+
Sbjct: 190 ISVAQRVAEEMKCALGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVII 249
Query: 408 LDEAHERTINTDVLFGLLKQLVK-----RRPDLRLIVTSATLDAERFSGYFFNCNIFSIP 462
LDEAHERT+ TD+LFGLLK+L + R+ L+++V SAT++ + S +F NC IF IP
Sbjct: 250 LDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIP 309
Query: 463 GRTFPVDINYSR------QEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACES 516
GR +PV + +E T Y+ + + + IH++E GDIL+FLTGQ EI+ +CE
Sbjct: 310 GRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCEL 369
Query: 517 LCEKIKALGKD 527
L + +++ D
Sbjct: 370 LFQMAESVDYD 380
>UNIPROTKB|Q8IX18 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOVERGEN:HBG039428 EMBL:AF461690 EMBL:AF260270
EMBL:AK025713 EMBL:AK095681 EMBL:BC024187 EMBL:AL832510
EMBL:AF319521 IPI:IPI00410110 IPI:IPI00797226 IPI:IPI01010408
RefSeq:NP_001159773.1 RefSeq:NP_078888.4 UniGene:Hs.29403
ProteinModelPortal:Q8IX18 SMR:Q8IX18 IntAct:Q8IX18 STRING:Q8IX18
PhosphoSite:Q8IX18 DMDM:116247771 PaxDb:Q8IX18 PRIDE:Q8IX18
DNASU:79665 Ensembl:ENST00000251241 GeneID:79665 KEGG:hsa:79665
UCSC:uc002ixn.2 CTD:79665 GeneCards:GC17P057642 HGNC:HGNC:18018
HPA:HPA044350 MIM:607570 neXtProt:NX_Q8IX18 PharmGKB:PA27227
InParanoid:Q8IX18 OMA:LYGSMPT PhylomeDB:Q8IX18 ChiTaRS:DHX40
GenomeRNAi:79665 NextBio:68866 ArrayExpress:Q8IX18 Bgee:Q8IX18
CleanEx:HS_DHX40 Genevestigator:Q8IX18 GermOnline:ENSG00000108406
Uniprot:Q8IX18
Length = 779
Score = 722 (259.2 bits), Expect = 2.3e-71, P = 2.3e-71
Identities = 150/384 (39%), Positives = 235/384 (61%)
Query: 431 RRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPVDINYSR------QEVTDYLDSA 484
R+ L+++V SAT++ + S +F NC IF IPGR +PV + +E T Y+ +
Sbjct: 200 RKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAI 259
Query: 485 LITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEKIKALGKD--VPE-----LVVLPVY 537
+ + IH++E GDIL+FLTGQ EI+ +CE L + +++ D V + L++LP Y
Sbjct: 260 VKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCY 319
Query: 538 SALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDS 597
++ ++ Q RIF P PPG RK V++TNI+ SLTIDGI YV+D GF KQ +NP+ LD
Sbjct: 320 GSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDI 379
Query: 598 LVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMK 657
L + PIS++ ALQR+GRAGRT GKC+R+Y++ + M IPEI+R +L LT+K
Sbjct: 380 LEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLK 439
Query: 658 AMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLSKML 717
+ I++++ F ++DPP+ + ++ A++QLY A+D G +T+LG M EFPL P L+ +
Sbjct: 440 CLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAV 499
Query: 718 LASVDLGCSDEILTIIAMIQTGHIFTRP--RERQAKADEKRARFFQPEG---DHLTLLAV 772
+ + L C D +L I AM+ ++F RP E Q +A+++ G D TL +
Sbjct: 500 IKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVI 559
Query: 773 YEAWKAKNFSLPWCGENFVNSRSL 796
+E K+ WC +++++ R L
Sbjct: 560 FEQCKSSGAPASWCQKHWIHWRCL 583
Score = 630 (226.8 bits), Expect = 1.3e-61, P = 1.3e-61
Identities = 128/251 (50%), Positives = 176/251 (70%)
Query: 288 SLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCTQPRRVAA 347
+ PI K + ++IQAV DN LI+ G TGSGKTTQL +YL EAG++ G IG TQPR+VAA
Sbjct: 52 TFPIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAA 111
Query: 348 TSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIM 407
SVA+RVAEE C LG +VGY +RF+DC+ +T IKYMTDG LL+ IL D NL+++SVI+
Sbjct: 112 ISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVII 171
Query: 408 LDEAHERTINTDVLFGLLKQLVK-----RRPDLRLIVTSATLDAERFSGYFFNCNIFSIP 462
LDEAHERT+ TD+LFGLLK+L + R+ L+++V SAT++ + S +F NC IF IP
Sbjct: 172 LDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIP 231
Query: 463 GRTFPVDINYSR------QEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACES 516
GR +PV + +E T Y+ + + + IH++E GDIL+FLTGQ EI+ +CE
Sbjct: 232 GRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCEL 291
Query: 517 LCEKIKALGKD 527
L + +++ D
Sbjct: 292 LFQMAESVDYD 302
>UNIPROTKB|C9JR60 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
RefSeq:NP_001159773.1 UniGene:Hs.29403 GeneID:79665 KEGG:hsa:79665
CTD:79665 HGNC:HGNC:18018 ChiTaRS:DHX40 OrthoDB:EOG48PMJH
EMBL:AC091271 EMBL:AC004167 IPI:IPI00952676
ProteinModelPortal:C9JR60 STRING:C9JR60 Ensembl:ENST00000425628
ArrayExpress:C9JR60 Uniprot:C9JR60
Length = 702
Score = 722 (259.2 bits), Expect = 2.3e-71, P = 2.3e-71
Identities = 150/384 (39%), Positives = 235/384 (61%)
Query: 431 RRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPVDINYSR------QEVTDYLDSA 484
R+ L+++V SAT++ + S +F NC IF IPGR +PV + +E T Y+ +
Sbjct: 123 RKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAI 182
Query: 485 LITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEKIKALGKD--VPE-----LVVLPVY 537
+ + IH++E GDIL+FLTGQ EI+ +CE L + +++ D V + L++LP Y
Sbjct: 183 VKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCY 242
Query: 538 SALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDS 597
++ ++ Q RIF P PPG RK V++TNI+ SLTIDGI YV+D GF KQ +NP+ LD
Sbjct: 243 GSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDI 302
Query: 598 LVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMK 657
L + PIS++ ALQR+GRAGRT GKC+R+Y++ + M IPEI+R +L LT+K
Sbjct: 303 LEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLK 362
Query: 658 AMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLSKML 717
+ I++++ F ++DPP+ + ++ A++QLY A+D G +T+LG M EFPL P L+ +
Sbjct: 363 CLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAV 422
Query: 718 LASVDLGCSDEILTIIAMIQTGHIFTRP--RERQAKADEKRARFFQPEG---DHLTLLAV 772
+ + L C D +L I AM+ ++F RP E Q +A+++ G D TL +
Sbjct: 423 IKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVI 482
Query: 773 YEAWKAKNFSLPWCGENFVNSRSL 796
+E K+ WC +++++ R L
Sbjct: 483 FEQCKSSGAPASWCQKHWIHWRCL 506
Score = 363 (132.8 bits), Expect = 4.6e-30, P = 4.6e-30
Identities = 86/204 (42%), Positives = 125/204 (61%)
Query: 341 QPRRVAATSVAKRVAEEFGCRLGEEVGYAIRF------EDCTGPDTVIKYMTDGMLLREI 394
Q R++A +A R EE GC +E G F + +T IKYMTDG LL+ I
Sbjct: 25 QEERLSAVCIADR--EEKGCT-SQEGGTTPTFPIQKQRKKIIQAETAIKYMTDGCLLKHI 81
Query: 395 LIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVK-----RRPDLRLIVTSATLDAERF 449
L D NL+++SVI+LDEAHERT+ TD+LFGLLK+L + R+ L+++V SAT++ +
Sbjct: 82 LGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKL 141
Query: 450 SGYFFNCNIFSIPGRTFPVDINYSR------QEVTDYLDSALITVLQIHVDEPEGDILLF 503
S +F NC IF IPGR +PV + +E T Y+ + + + IH++E GDIL+F
Sbjct: 142 SAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVF 201
Query: 504 LTGQEEIDFACESLCEKIKALGKD 527
LTGQ EI+ +CE L + +++ D
Sbjct: 202 LTGQFEIEKSCELLFQMAESVDYD 225
>MGI|MGI:1914737 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:1914737
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL592222 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT EMBL:AK004610
EMBL:AK010512 EMBL:AK031000 EMBL:AK075991 EMBL:AL596111
EMBL:BC058276 IPI:IPI00453964 RefSeq:NP_080467.3 UniGene:Mm.260627
ProteinModelPortal:Q6PE54 SMR:Q6PE54 STRING:Q6PE54
PhosphoSite:Q6PE54 PaxDb:Q6PE54 PRIDE:Q6PE54
Ensembl:ENSMUST00000018569 GeneID:67487 KEGG:mmu:67487
UCSC:uc007ktc.1 InParanoid:Q6PE54 OrthoDB:EOG48PMJH NextBio:324718
Bgee:Q6PE54 CleanEx:MM_DHX40 Genevestigator:Q6PE54
GermOnline:ENSMUSG00000018425 Uniprot:Q6PE54
Length = 779
Score = 721 (258.9 bits), Expect = 2.9e-71, P = 2.9e-71
Identities = 150/384 (39%), Positives = 235/384 (61%)
Query: 431 RRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPVDINYSR------QEVTDYLDSA 484
R+ L+++V SAT++ + S +F NC IF IPGR +PV + +E T Y+ +
Sbjct: 200 RKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAI 259
Query: 485 LITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEKIKALGKD--VPE-----LVVLPVY 537
+ + IH++E GDIL+FLTGQ EI+ +CE L + +++ D V + L++LP Y
Sbjct: 260 VKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCY 319
Query: 538 SALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDS 597
++ ++ Q RIF P PPG RK V++TNI+ SLTIDGI YV+D GF KQ +NP+ LD
Sbjct: 320 GSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDI 379
Query: 598 LVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMK 657
L + PIS++ ALQR+GRAGRT GKC+R+Y++ + M IPEI+R +L LT+K
Sbjct: 380 LEVVPISKSEALQRSGRAGRTASGKCFRIYSKEFWSQCMPDHVIPEIKRTSLTSVVLTLK 439
Query: 658 AMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLSKML 717
+ I++++ F ++DPP+ + ++ A++QLY A+D G +T+LG M EFPL P L+ +
Sbjct: 440 CLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAV 499
Query: 718 LASVDLGCSDEILTIIAMIQTGHIFTRP--RERQAKADEKRARFFQPEG---DHLTLLAV 772
+ + L C D +L I AM+ ++F RP E Q +A+++ G D TL +
Sbjct: 500 IRAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVI 559
Query: 773 YEAWKAKNFSLPWCGENFVNSRSL 796
+E K+ WC +++++ R L
Sbjct: 560 FEQCKSSGAPASWCQKHWIHWRCL 583
Score = 635 (228.6 bits), Expect = 3.8e-62, P = 3.8e-62
Identities = 130/251 (51%), Positives = 176/251 (70%)
Query: 288 SLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCTQPRRVAA 347
+ PI K + +LIQAV DN LI+ G TGSGKTTQL +YL EAG++ G IG TQPR+VAA
Sbjct: 52 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAA 111
Query: 348 TSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIM 407
SVA+RVAEE C LG +VGY +RF+DC+ +T IKYMTDG LL+ IL D NLS++SVI+
Sbjct: 112 ISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLSKFSVII 171
Query: 408 LDEAHERTINTDVLFGLLKQLVK-----RRPDLRLIVTSATLDAERFSGYFFNCNIFSIP 462
LDEAHERT+ TD+LFGLLK+L + R+ L+++V SAT++ + S +F NC IF IP
Sbjct: 172 LDEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIP 231
Query: 463 GRTFPVDINYSR------QEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACES 516
GR +PV + +E T Y+ + + + IH++E GDIL+FLTGQ EI+ +CE
Sbjct: 232 GRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCEL 291
Query: 517 LCEKIKALGKD 527
L + +++ D
Sbjct: 292 LFQMAESVDYD 302
>UNIPROTKB|F5GZS0 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003676
EMBL:AC018452 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AC134026
HGNC:HGNC:14410 IPI:IPI00922725 ProteinModelPortal:F5GZS0
SMR:F5GZS0 PRIDE:F5GZS0 Ensembl:ENST00000544526 ArrayExpress:F5GZS0
Bgee:F5GZS0 Uniprot:F5GZS0
Length = 994
Score = 405 (147.6 bits), Expect = 2.2e-70, Sum P(4) = 2.2e-70
Identities = 93/264 (35%), Positives = 146/264 (55%)
Query: 542 SEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVIT 601
S S++F+ PPG RK+V+ATNIAE S+TID + YVID G K+ ++ + + ++
Sbjct: 516 SGTMSQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAE 575
Query: 602 PISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGI 661
+S+A+A QR GRAGR PG CY LY S + +PEI R L L +K + +
Sbjct: 576 WVSKANAKQRKGRAGRVQPGHCYHLYN-GLRASLLDDYQLPEILRTPLEELCLQIKILRL 634
Query: 662 NNLLSF--DFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLA 719
+ F +DPPS +A++ ++ L L ALD++ LT LG +A P++P + KM+L
Sbjct: 635 GGIAYFLSRLMDPPSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILF 694
Query: 720 SVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQP-EGDHLTLLAVYEAWK- 777
C D +LTI A + F P ++ AD +R + DHLT++ +E W+
Sbjct: 695 GALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARRKELAKDTRSDHLTVVNAFEGWEE 754
Query: 778 AKN----FSLPWCGENFVNSRSLK 797
A+ + +C E F++S +L+
Sbjct: 755 ARRRGFRYEKDYCWEYFLSSNTLQ 778
Score = 392 (143.0 bits), Expect = 2.2e-70, Sum P(4) = 2.2e-70
Identities = 88/208 (42%), Positives = 128/208 (61%)
Query: 280 LSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGK--- 336
+ +Q R LP + ++ EL+ + ++QV ++ GETG GKTTQ+ Q++ + Y +GK
Sbjct: 198 IEMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILD-NYIERGKGSA 256
Query: 337 --IGCTQPRRVAATSVAKRVAEEFG--CRLGEEVGYAIRFED-CTGPDTVIKYMTDGMLL 391
I CTQPRR++A SVA+RVA E C G GY IR + I Y T G++L
Sbjct: 257 CRIVCTQPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIIL 316
Query: 392 REILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSG 451
+ + D LS S I+LDE HER + +DVL ++K L+ R DL++I+ SATL+AE+FS
Sbjct: 317 QWLQSDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATLNAEKFSE 376
Query: 452 YFFNCNIFSIPGRTFPVDINYSRQEVTD 479
YF NC + IPG TFPV + Y ++V +
Sbjct: 377 YFGNCPMIHIPGFTFPV-VEYLLEDVIE 403
Score = 50 (22.7 bits), Expect = 2.2e-70, Sum P(4) = 2.2e-70
Identities = 15/45 (33%), Positives = 24/45 (53%)
Query: 479 DYLDSALITVL--QIHVDEPEGDILLFLTGQEEIDFACESLCEKI 521
D +D LI L I ++E +G IL+FL G + I + L ++
Sbjct: 468 DKVDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQV 512
Score = 37 (18.1 bits), Expect = 2.2e-70, Sum P(4) = 2.2e-70
Identities = 8/37 (21%), Positives = 18/37 (48%)
Query: 190 FKNPEGSLSRTAALQSALTKERREVREQQLRTMIDSI 226
+ +G ++ A Q E RE+Q+ +++S+
Sbjct: 66 YAKKQGQKNKEAERQERAVVHMDERREEQIVQLLNSV 102
>CGD|CAL0005664 [details] [associations]
symbol:orf19.6818 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 CGD:CAL0005664
GO:GO:0005524 GO:GO:0003676 Gene3D:3.10.110.10 InterPro:IPR016135
SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
EMBL:AACQ01000029 EMBL:AACQ01000028 RefSeq:XP_719795.1
RefSeq:XP_719912.1 ProteinModelPortal:Q5ADM3 GeneID:3638543
GeneID:3638643 KEGG:cal:CaO19.14110 KEGG:cal:CaO19.6818
Uniprot:Q5ADM3
Length = 1370
Score = 443 (161.0 bits), Expect = 2.2e-70, Sum P(3) = 2.2e-70
Identities = 118/333 (35%), Positives = 176/333 (52%)
Query: 469 DINYSR-QEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEKIKALGKD 527
++NY VT ++D L + +G IL+FL G EI IK + K
Sbjct: 796 NLNYELIAHVTRFIDKRLTQEAK-----QDGSILIFLPGVLEIS-------STIKEINKS 843
Query: 528 VP-ELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQ 586
+ + LP++S L S Q IF+ AP G RKVVV+TNIAE S+TI VID G +K
Sbjct: 844 SDNKFMALPLHSGLTSAEQKSIFKTAPKGKRKVVVSTNIAETSITIPDCVAVIDTGKSKN 903
Query: 587 NVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQR 646
++ K L+ + SQA QR GRAGR G CY LYT+ + + M IPEI+R
Sbjct: 904 LFFDHKLNTTKLIESWCSQAEVRQRRGRAGRVTAGTCYHLYTKETFEA-MQKQPIPEIKR 962
Query: 647 INLVHTTLTMKAMGINNLLSF--DFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKM 704
L + L +K+MGI+N+ F +D P +L A + L+ +GAL E L TKLG +
Sbjct: 963 TRLENLYLVVKSMGISNVNEFLSSGLDAPDKSSLDKANQFLHEIGALQENSL-TKLGNYI 1021
Query: 705 AEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQPEG 764
+ P DP +K+L+ GC D LT+ A+ TG F E++ K + + +F +G
Sbjct: 1022 SYLPTDPQSAKLLILGCIFGCLDICLTLAAISSTGSPFINSYEQRDKLKQIQKKFGNGQG 1081
Query: 765 DHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLK 797
D +++ Y A+ + N S + EN+++ ++K
Sbjct: 1082 DFISMANAYNAYMS-NKSKRFLTENYLSYTTIK 1113
Score = 348 (127.6 bits), Expect = 2.2e-70, Sum P(3) = 2.2e-70
Identities = 84/226 (37%), Positives = 132/226 (58%)
Query: 255 LSARDMPEWKKNAYGKAFTFGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGET 314
+S +D+ E K +Y K + ++ IQ R LP F + L+ A++ QV ++ GET
Sbjct: 542 ISDKDI-ELVKESYKKRKHSDEFKEMLIQ--RSKLPAFAKQESLMTAINSGQVTLITGET 598
Query: 315 GSGKTTQLAQYLAEAGYTTKG----KIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAI 370
GSGK+TQ+ Q++ + Y+ KG KI CTQPRR++A S+A R+++E +G E GY I
Sbjct: 599 GSGKSTQVVQFIMDDLYS-KGDFTTKIICTQPRRLSAVSLADRISKERVDEVGSETGYII 657
Query: 371 RFEDCTGPDTVIKYMTDGMLLREILIDEN---LSQYSVIMLDEAHERTINTDVLFGLLKQ 427
R E+ T +T I + T G+LLR + + L I++DE HER+++ D L LLK+
Sbjct: 658 RGENKTSSNTRITFATTGVLLRMLQSSKKNGVLKNIGYILIDEVHERSVDADFLLILLKK 717
Query: 428 LVKRRPDLRLIVTSATLDAERFSGYFFN-CNIFSIPGRTFPVDINY 472
++K P L++I+ SAT+ + F +F I GRT+P+ Y
Sbjct: 718 MIKSMPKLKIILLSATISVDTFINFFEKPLTPLHIEGRTYPIQDFY 763
Score = 55 (24.4 bits), Expect = 2.2e-70, Sum P(3) = 2.2e-70
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 16 LSKICSELETHLGFIDKVLAEFISESGRNSETVEIFDDKLKEYGADLPNYLVRT 69
++K SE + LGF + + E + S R SE++E + E DLP V+T
Sbjct: 287 MAKTASEKLSALGFRESHIKESFNYSSRFSESLEWLLFHIPE--DDLPQSFVKT 338
>UNIPROTKB|Q5ADM3 [details] [associations]
symbol:CaO19.14110 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 CGD:CAL0005664
GO:GO:0005524 GO:GO:0003676 Gene3D:3.10.110.10 InterPro:IPR016135
SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
EMBL:AACQ01000029 EMBL:AACQ01000028 RefSeq:XP_719795.1
RefSeq:XP_719912.1 ProteinModelPortal:Q5ADM3 GeneID:3638543
GeneID:3638643 KEGG:cal:CaO19.14110 KEGG:cal:CaO19.6818
Uniprot:Q5ADM3
Length = 1370
Score = 443 (161.0 bits), Expect = 2.2e-70, Sum P(3) = 2.2e-70
Identities = 118/333 (35%), Positives = 176/333 (52%)
Query: 469 DINYSR-QEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEKIKALGKD 527
++NY VT ++D L + +G IL+FL G EI IK + K
Sbjct: 796 NLNYELIAHVTRFIDKRLTQEAK-----QDGSILIFLPGVLEIS-------STIKEINKS 843
Query: 528 VP-ELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQ 586
+ + LP++S L S Q IF+ AP G RKVVV+TNIAE S+TI VID G +K
Sbjct: 844 SDNKFMALPLHSGLTSAEQKSIFKTAPKGKRKVVVSTNIAETSITIPDCVAVIDTGKSKN 903
Query: 587 NVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQR 646
++ K L+ + SQA QR GRAGR G CY LYT+ + + M IPEI+R
Sbjct: 904 LFFDHKLNTTKLIESWCSQAEVRQRRGRAGRVTAGTCYHLYTKETFEA-MQKQPIPEIKR 962
Query: 647 INLVHTTLTMKAMGINNLLSF--DFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKM 704
L + L +K+MGI+N+ F +D P +L A + L+ +GAL E L TKLG +
Sbjct: 963 TRLENLYLVVKSMGISNVNEFLSSGLDAPDKSSLDKANQFLHEIGALQENSL-TKLGNYI 1021
Query: 705 AEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQPEG 764
+ P DP +K+L+ GC D LT+ A+ TG F E++ K + + +F +G
Sbjct: 1022 SYLPTDPQSAKLLILGCIFGCLDICLTLAAISSTGSPFINSYEQRDKLKQIQKKFGNGQG 1081
Query: 765 DHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLK 797
D +++ Y A+ + N S + EN+++ ++K
Sbjct: 1082 DFISMANAYNAYMS-NKSKRFLTENYLSYTTIK 1113
Score = 348 (127.6 bits), Expect = 2.2e-70, Sum P(3) = 2.2e-70
Identities = 84/226 (37%), Positives = 132/226 (58%)
Query: 255 LSARDMPEWKKNAYGKAFTFGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGET 314
+S +D+ E K +Y K + ++ IQ R LP F + L+ A++ QV ++ GET
Sbjct: 542 ISDKDI-ELVKESYKKRKHSDEFKEMLIQ--RSKLPAFAKQESLMTAINSGQVTLITGET 598
Query: 315 GSGKTTQLAQYLAEAGYTTKG----KIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAI 370
GSGK+TQ+ Q++ + Y+ KG KI CTQPRR++A S+A R+++E +G E GY I
Sbjct: 599 GSGKSTQVVQFIMDDLYS-KGDFTTKIICTQPRRLSAVSLADRISKERVDEVGSETGYII 657
Query: 371 RFEDCTGPDTVIKYMTDGMLLREILIDEN---LSQYSVIMLDEAHERTINTDVLFGLLKQ 427
R E+ T +T I + T G+LLR + + L I++DE HER+++ D L LLK+
Sbjct: 658 RGENKTSSNTRITFATTGVLLRMLQSSKKNGVLKNIGYILIDEVHERSVDADFLLILLKK 717
Query: 428 LVKRRPDLRLIVTSATLDAERFSGYFFN-CNIFSIPGRTFPVDINY 472
++K P L++I+ SAT+ + F +F I GRT+P+ Y
Sbjct: 718 MIKSMPKLKIILLSATISVDTFINFFEKPLTPLHIEGRTYPIQDFY 763
Score = 55 (24.4 bits), Expect = 2.2e-70, Sum P(3) = 2.2e-70
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 16 LSKICSELETHLGFIDKVLAEFISESGRNSETVEIFDDKLKEYGADLPNYLVRT 69
++K SE + LGF + + E + S R SE++E + E DLP V+T
Sbjct: 287 MAKTASEKLSALGFRESHIKESFNYSSRFSESLEWLLFHIPE--DDLPQSFVKT 338
>UNIPROTKB|F1NWM3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AADN02025787
IPI:IPI00583149 Ensembl:ENSGALT00000008234 Uniprot:F1NWM3
Length = 730
Score = 709 (254.6 bits), Expect = 5.5e-70, P = 5.5e-70
Identities = 150/387 (38%), Positives = 241/387 (62%)
Query: 431 RRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPV-DINYSRQEVTDYLDSALIT-- 487
R+ +++++V SATL+ ++ S +F +C++ IPGR++PV +I + D SA +T
Sbjct: 149 RKTEMKVVVMSATLEVDKLSEFFGHCSVLHIPGRSYPVKEIFCNLLSPRDTGSSAYVTEA 208
Query: 488 ---VLQIHVDEPEGDILLFLTGQEEIDFACESLCEKIKALG-------KDVPELVVLPVY 537
L IH++EPEGDIL+FLTGQ EI+ AC+ L +K +++ + + L++LP+Y
Sbjct: 209 VKVTLDIHLNEPEGDILVFLTGQIEIEKACDLLFKKAESIDYRYEVHDRSIEGLLILPLY 268
Query: 538 SALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDS 597
++ ++ Q RIF PAP G RK VV+TNIA SLTI+G+ YV+D GF KQ +NP+ LD
Sbjct: 269 GSMSTDQQKRIFLPAPKGIRKCVVSTNIAATSLTIEGVRYVVDSGFVKQLNHNPRVGLDI 328
Query: 598 LVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMK 657
L + PIS++ A+QRAGRAGRT GK YRLY+ + M T+PEI+R +L LT+K
Sbjct: 329 LEVVPISKSEAMQRAGRAGRTSSGKSYRLYSTEFWEQCMPDHTVPEIKRTSLTSVILTLK 388
Query: 658 AMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDE--EGLLTKLGKKMAEFPLDPPLSK 715
+ +++++ F ++D P + ++ A++QLY A+D G +T+LG+ + +FPL P LS
Sbjct: 389 CLSVHDVIRFPYLDRPEERHILEALKQLYQCDAIDRTRRGHVTRLGEFLVQFPLPPNLSC 448
Query: 716 MLLASVDLGCSDEILTIIAMIQTGHIFTRPRE--RQAKADEKRARFFQPEG---DHLTLL 770
++ + L C D +L I AM+ ++F RP + +Q +A+ + G D TLL
Sbjct: 449 AVIKAASLDCEDMLLPIAAMLSVENVFIRPGDPQKQKEAELQHQELSSQVGGCNDFATLL 508
Query: 771 AVYEAWKAKNFSLPWCGENFVNSRSLK 797
++E KA WC + +++ R++K
Sbjct: 509 NIFEQCKASKSPSAWCHKYWIHWRAVK 535
Score = 618 (222.6 bits), Expect = 2.4e-60, P = 2.4e-60
Identities = 128/248 (51%), Positives = 178/248 (71%)
Query: 289 LPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCTQPRRVAAT 348
LPI + + L++AV + LI+ GETGSGK+TQL +YL EAG G IG TQPRRVA
Sbjct: 1 LPIRRHRRALVRAVSERPFLIVTGETGSGKSTQLPKYLYEAGLAQHGAIGVTQPRRVATI 60
Query: 349 SVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIML 408
SVA+RVAEE GC LG VGY +RF+DC+ +T IKYMTDG LLR IL D LS+YS+I+L
Sbjct: 61 SVAQRVAEEMGCALGSVVGYQVRFDDCSSEETAIKYMTDGCLLRHILADPLLSKYSIIIL 120
Query: 409 DEAHERTINTDVLFGLLKQL-VKRRP-----DLRLIVTSATLDAERFSGYFFNCNIFSIP 462
DEAHER+++TD+LFGLLK+L ++ +P +++++V SATL+ ++ S +F +C++ IP
Sbjct: 121 DEAHERSLSTDILFGLLKKLFLQNKPPGRKTEMKVVVMSATLEVDKLSEFFGHCSVLHIP 180
Query: 463 GRTFPV-DINYSRQEVTDYLDSALIT-----VLQIHVDEPEGDILLFLTGQEEIDFACES 516
GR++PV +I + D SA +T L IH++EPEGDIL+FLTGQ EI+ AC+
Sbjct: 181 GRSYPVKEIFCNLLSPRDTGSSAYVTEAVKVTLDIHLNEPEGDILVFLTGQIEIEKACDL 240
Query: 517 LCEKIKAL 524
L +K +++
Sbjct: 241 LFKKAESI 248
>TAIR|locus:2196255 [details] [associations]
symbol:AT1G58050 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AC079604
IPI:IPI00531251 PIR:F96613 RefSeq:NP_176102.1 UniGene:At.52250
ProteinModelPortal:Q9C6G0 SMR:Q9C6G0 PaxDb:Q9C6G0 PRIDE:Q9C6G0
EnsemblPlants:AT1G58050.1 GeneID:842172 KEGG:ath:AT1G58050
TAIR:At1g58050 HOGENOM:HOG000240812 InParanoid:Q9C6G0 OMA:ISPENED
PhylomeDB:Q9C6G0 ProtClustDB:CLSN2679369 Genevestigator:Q9C6G0
Uniprot:Q9C6G0
Length = 1417
Score = 464 (168.4 bits), Expect = 2.3e-68, Sum P(2) = 2.3e-68
Identities = 118/324 (36%), Positives = 175/324 (54%)
Query: 470 INYSRQEVTDYLDSALITVLQIHVDEP--EGDILLFLTGQEEIDFACESLCEKIKALGKD 527
I Y V DY D L+ L H+D+ EG IL+FL G EI+ L + G
Sbjct: 856 IKYIASAVVDY-D--LLEELICHIDDTCEEGAILVFLPGMSEINMLLNRLAASYRFRGAS 912
Query: 528 VPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQN 587
L LP++S++ S Q ++F P G RKV++ATNIAE S+TI+ + YVID G K+N
Sbjct: 913 GDWL--LPLHSSIASTEQKKVFLRPPKGIRKVIIATNIAETSITIEDVVYVIDSGKHKEN 970
Query: 588 VYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRI 647
YNP ++L S+V +S+A+A QR GRAGR PG C+ LYT + M P +PE+ R+
Sbjct: 971 RYNPHKKLSSMVEDWVSKANARQRMGRAGRVKPGHCFSLYTRHRFEKLMRPYQVPEMLRV 1030
Query: 648 NLVHTTLTMKAMGINNLLSF--DFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMA 705
LV L +K +G+ + F ++PPS A+ SA+ L+ +GAL+ + LT LG +A
Sbjct: 1031 PLVELCLHIKLLGLGQIKPFLSKALEPPSESAINSAILLLHKVGALEGDEELTPLGHHLA 1090
Query: 706 EFPLDPPLSKMLLASVDLGCSDEILTIIAMI---QTGHIFTRP-----RERQAKADEK-- 755
+ P+D + KMLL GC IL+I A + ++ ++ + R + A +K
Sbjct: 1091 KLPVDLLIGKMLLYGGIFGCLSPILSIAAFLSCCKSPFVYAKDEQNVDRVKLALLSDKLE 1150
Query: 756 ---RARFFQPEGDHLTLLAVYEAW 776
+ DHL ++ YE W
Sbjct: 1151 SSSNLNNNDRQSDHLLMVVAYEKW 1174
Score = 315 (115.9 bits), Expect = 2.3e-68, Sum P(2) = 2.3e-68
Identities = 80/213 (37%), Positives = 126/213 (59%)
Query: 286 RRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAE----AGYTTKGKIGCTQ 341
R +LPI ++K +++Q + + VL++ GETGSGKTTQ+ Q++ + +G+ I CTQ
Sbjct: 594 RAALPISEVKKDILQKLKEKDVLVVCGETGSGKTTQVPQFILDDMIDSGHGGYCNIICTQ 653
Query: 342 PRRVAATSVAKRVAEEFGCRL--GEE---VGYAIRFEDCTGPDTVIKYMTDGMLLREILI 396
PR A +VA+RVA+E C G + V Y +R ++ T + + T G+LLR+++
Sbjct: 654 PR---AITVAQRVADE-RCEPPPGFDNSVVAYQVRHQNARSDKTRLLFCTTGILLRKLVG 709
Query: 397 DENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRR------PDLRLIVTSATLDAERFS 450
D L + I++DE HER++ D L +LK L++++ P L++I+ SAT+DA +FS
Sbjct: 710 DTTLKDVTHIIVDEVHERSLMGDFLLIILKSLIEKQSWDNALPKLKVILMSATVDAHQFS 769
Query: 451 GYFFNCNIFSIPGRTFPVDINYSRQ--EVTDYL 481
YF C I + GRT PV + E T YL
Sbjct: 770 RYFGQCPIITAQGRTHPVTTYFLEDIYERTKYL 802
Score = 40 (19.1 bits), Expect = 2.0e-39, Sum P(2) = 2.0e-39
Identities = 15/56 (26%), Positives = 25/56 (44%)
Query: 446 AERFSGYFFNCNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDIL 501
A RF + + S + + V S QEV + +S ++ ++ DE E D L
Sbjct: 127 ASRFPSTGRSVAVISKSKKDWNVSAESSVQEVKEVPESEVLVRVKSKRDEEEEDSL 182
>UNIPROTKB|J9PAM3 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 GO:GO:0008026
EMBL:AAEX03007702 Ensembl:ENSCAFT00000046695 Uniprot:J9PAM3
Length = 1000
Score = 390 (142.3 bits), Expect = 2.9e-68, Sum P(2) = 2.9e-68
Identities = 79/196 (40%), Positives = 127/196 (64%)
Query: 276 QRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTT-- 333
+R + R+SLP+F+ + E+++ + +N+V++++GETGSGKTTQ+ Q+L + +
Sbjct: 179 KRGESEFDSFRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGI 238
Query: 334 KGKIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLRE 393
+I CTQPRR+AA +VA+RVA E R+G+ +GY IR E P T++ + T+G+LLR
Sbjct: 239 PCRIFCTQPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRT 298
Query: 394 ILI-DENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGY 452
++ D LS + +++DE HER +D L L+ L+++ P L+LI++SA LD F Y
Sbjct: 299 LMAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRY 358
Query: 453 FFNCNIFSIPGRTFPV 468
F +C + I GR F V
Sbjct: 359 FGSCPVIYIQGRPFEV 374
Score = 388 (141.6 bits), Expect = 2.9e-68, Sum P(2) = 2.9e-68
Identities = 101/310 (32%), Positives = 168/310 (54%)
Query: 498 GDILLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGR 557
G IL+FL G +EI + + K + V ++S + + Q ++ + P G R
Sbjct: 622 GAILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVR 681
Query: 558 KVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGR 617
K++++TNIAE S+T++ + +VID G K+ ++ + L + IS+ASA+QR GRAGR
Sbjct: 682 KIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAVQRKGRAGR 741
Query: 618 TGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFV--DPPSP 675
PG C+RL++ +++ + T PE+ R+ L L K + N DF+ P P
Sbjct: 742 CRPGICFRLFSRLRFQNMLEFQT-PELLRMPLQELCLHTKLLAPVNCPIADFLMKAPEPP 800
Query: 676 QALI--SAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTII 733
ALI +A++ L ++ A+D LT+LG +A+ P++P L KM+L +V L C D ILTI
Sbjct: 801 PALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIA 860
Query: 734 AMIQTGHIFTRPRERQAKADEK--RARFFQPE-GDHLTLLAVYEAW-KAKN--FSLPWCG 787
+ F P + K R RF DH+ LL ++AW KA++ + +C
Sbjct: 861 CTLAYRDPFVLPTQASQKRAAMLCRKRFTAGTFSDHMALLRAFQAWQKARSDGWERAFCE 920
Query: 788 ENFVNSRSLK 797
+NF++ +++
Sbjct: 921 KNFLSQATME 930
>UNIPROTKB|F1MNU7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 CTD:64848 OMA:RAFWESS EMBL:DAAA02027655
IPI:IPI00689346 RefSeq:NP_001179740.1 UniGene:Bt.24975
ProteinModelPortal:F1MNU7 Ensembl:ENSBTAT00000018745 GeneID:541024
KEGG:bta:541024 NextBio:20878969 Uniprot:F1MNU7
Length = 1429
Score = 393 (143.4 bits), Expect = 3.0e-68, Sum P(2) = 3.0e-68
Identities = 101/310 (32%), Positives = 169/310 (54%)
Query: 498 GDILLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGR 557
G IL+FL G +EI + + K ++ V ++S + + Q ++ + P G R
Sbjct: 622 GAILIFLPGYDEIVGLRDRILFDDKRFAENAHRYQVFMLHSNMQTSDQKKVLKNPPAGVR 681
Query: 558 KVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGR 617
K++++TNIAE S+T++ + +VID G K+ ++ + L + IS+ASA+QR GRAGR
Sbjct: 682 KIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGR 741
Query: 618 TGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFV--DPPSP 675
PG C+RL++ +++ + T PE+ R+ L L K + N DF+ P P
Sbjct: 742 CRPGICFRLFSRLRFQNMLEFQT-PELLRMPLQELCLHTKLLAPVNCAIADFLMKAPEPP 800
Query: 676 QALI--SAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTII 733
ALI +A++ L ++ A+D LT+LG +A+ P++P L KM+L +V L C D ILTI
Sbjct: 801 PALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIA 860
Query: 734 AMIQTGHIFTRPRERQAKADEK--RARFFQPE-GDHLTLLAVYEAW-KAKN--FSLPWCG 787
+ F P + K R RF DH+ LL ++AW KA++ + +C
Sbjct: 861 CTLAYRDPFVLPTQASQKRAAMLCRKRFTAGTFSDHMALLRAFQAWQKARSDGWERAFCE 920
Query: 788 ENFVNSRSLK 797
+NF++ +++
Sbjct: 921 KNFLSQATME 930
Score = 390 (142.3 bits), Expect = 3.0e-68, Sum P(2) = 3.0e-68
Identities = 79/196 (40%), Positives = 127/196 (64%)
Query: 276 QRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTT-- 333
+R + R+SLP+F+ + E+++ + +N+V++++GETGSGKTTQ+ Q+L + +
Sbjct: 179 KRGESEFDSFRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGI 238
Query: 334 KGKIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLRE 393
+I CTQPRR+AA +VA+RVA E R+G+ +GY IR E P T++ + T+G+LLR
Sbjct: 239 PCRIFCTQPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRT 298
Query: 394 ILI-DENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGY 452
++ D LS + +++DE HER +D L L+ L+++ P L+LI++SA LD F Y
Sbjct: 299 LMAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRY 358
Query: 453 FFNCNIFSIPGRTFPV 468
F +C + I GR F V
Sbjct: 359 FGSCPVIYIQGRPFEV 374
>MGI|MGI:2448561 [details] [associations]
symbol:Ythdc2 "YTH domain containing 2" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
MGI:MGI:2448561 GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882
CTD:64848 HOGENOM:HOG000155703 OMA:RAFWESS OrthoDB:EOG4JWVCN
EMBL:BC138263 EMBL:BC171951 IPI:IPI00343249 RefSeq:NP_001156485.1
UniGene:Mm.244482 ProteinModelPortal:B2RR83 SMR:B2RR83
PhosphoSite:B2RR83 PaxDb:B2RR83 PRIDE:B2RR83
Ensembl:ENSMUST00000037763 GeneID:240255 KEGG:mmu:240255
UCSC:uc008evb.2 InParanoid:B2RR83 ChiTaRS:YTHDC2 NextBio:384522
Bgee:B2RR83 Genevestigator:B2RR83 Uniprot:B2RR83
Length = 1445
Score = 391 (142.7 bits), Expect = 4.1e-68, Sum P(2) = 4.1e-68
Identities = 97/282 (34%), Positives = 159/282 (56%)
Query: 191 KNPEGSLSRTAALQSALTKERREVREQQLRTMIDSIPKDLNRPWEDPMPETGERHLAQEL 250
K +GS + A + LT + +R++I P N+ + +P+T ER +
Sbjct: 118 KKKDGSETAHAMMTCNLTHNTKHA----VRSLIQRFPVT-NKERTELLPKT-ERG---NV 168
Query: 251 RGVGLSARDMPEWKKNAY-GKAFTFGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLI 309
V R+M + G +R + R+SLP+F+ + E+++ + +N+V++
Sbjct: 169 FAVEAENREMSKTSGRLNNGIPQVPVKRGESEFDSFRQSLPVFEKQEEIVKIIKENKVVL 228
Query: 310 LIGETGSGKTTQLAQYLAEAGYTT--KGKIGCTQPRRVAATSVAKRVAEEFGCRLGEEVG 367
++GETGSGKTTQ+ Q+L + + +I CTQPRR+AA +VA+RVA E R+G+ +G
Sbjct: 229 IVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPRRLAAIAVAERVAAERRERIGQTIG 288
Query: 368 YAIRFEDCTGPDTVIKYMTDGMLLREILI-DENLSQYSVIMLDEAHERTINTDVLFGLLK 426
Y IR E P T++ + T+G+LLR ++ D LS + +++DE HER +D L L+
Sbjct: 289 YQIRLESRVSPKTLLTFCTNGVLLRTLMAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLR 348
Query: 427 QLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPV 468
L+++ P L+LI++SA LD F YF +C + I GR F V
Sbjct: 349 DLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFEV 390
Score = 391 (142.7 bits), Expect = 4.1e-68, Sum P(2) = 4.1e-68
Identities = 101/310 (32%), Positives = 168/310 (54%)
Query: 498 GDILLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGR 557
G IL+FL G +EI + + K + V ++S + + Q ++ + P G R
Sbjct: 638 GAILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVR 697
Query: 558 KVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGR 617
K++++TNIAE S+T++ + +VID G K+ ++ + L + IS+ASA+QR GRAGR
Sbjct: 698 KIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGR 757
Query: 618 TGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFV--DPPSP 675
PG C+RL++ +++ + T PE+ R+ L L K + N DF+ P P
Sbjct: 758 CRPGICFRLFSRLRFQNMLEFQT-PELLRMPLQELCLHTKLLAPVNCTIADFLMKAPEPP 816
Query: 676 QALI--SAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTII 733
ALI +A++ L ++ A+D LT+LG +A+ P++P L KM+L +V L C D ILTI
Sbjct: 817 PALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIA 876
Query: 734 AMIQTGHIFTRPRERQAKADEK--RARFFQPE-GDHLTLLAVYEAW-KAKN--FSLPWCG 787
+ F P + K R RF DH+ LL ++AW KA++ + +C
Sbjct: 877 CTLAYRDPFVLPTQASQKRAAMLCRKRFTAGTFSDHMALLRAFQAWQKARSDGWERAFCE 936
Query: 788 ENFVNSRSLK 797
+NF++ +++
Sbjct: 937 KNFLSQATME 946
>UNIPROTKB|Q9H6S0 [details] [associations]
symbol:YTHDC2 "Probable ATP-dependent RNA helicase YTHDC2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 EMBL:AC093208 EMBL:AC010389 EMBL:BC137285
EMBL:AK025593 IPI:IPI00010200 RefSeq:NP_073739.3 UniGene:Hs.231942
PDB:2YU6 PDBsum:2YU6 ProteinModelPortal:Q9H6S0 SMR:Q9H6S0
IntAct:Q9H6S0 PhosphoSite:Q9H6S0 DMDM:239938805 PaxDb:Q9H6S0
PeptideAtlas:Q9H6S0 PRIDE:Q9H6S0 Ensembl:ENST00000161863
GeneID:64848 KEGG:hsa:64848 UCSC:uc003kqn.3 CTD:64848
GeneCards:GC05P112877 HGNC:HGNC:24721 HPA:HPA037364
neXtProt:NX_Q9H6S0 PharmGKB:PA134912676 HOGENOM:HOG000155703
HOVERGEN:HBG063891 InParanoid:Q9H6S0 OMA:RAFWESS OrthoDB:EOG4JWVCN
PhylomeDB:Q9H6S0 EvolutionaryTrace:Q9H6S0 GenomeRNAi:64848
NextBio:66962 ArrayExpress:Q9H6S0 Bgee:Q9H6S0 CleanEx:HS_YTHDC2
Genevestigator:Q9H6S0 GermOnline:ENSG00000047188 Uniprot:Q9H6S0
Length = 1430
Score = 390 (142.3 bits), Expect = 1.4e-67, Sum P(2) = 1.4e-67
Identities = 79/196 (40%), Positives = 127/196 (64%)
Query: 276 QRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTT-- 333
+R + R+SLP+F+ + E+++ + +N+V++++GETGSGKTTQ+ Q+L + +
Sbjct: 180 KRGESEFDSFRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGI 239
Query: 334 KGKIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLRE 393
+I CTQPRR+AA +VA+RVA E R+G+ +GY IR E P T++ + T+G+LLR
Sbjct: 240 PCRIFCTQPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRT 299
Query: 394 ILI-DENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGY 452
++ D LS + +++DE HER +D L L+ L+++ P L+LI++SA LD F Y
Sbjct: 300 LMAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRY 359
Query: 453 FFNCNIFSIPGRTFPV 468
F +C + I GR F V
Sbjct: 360 FGSCPVIYIQGRPFEV 375
Score = 387 (141.3 bits), Expect = 1.4e-67, Sum P(2) = 1.4e-67
Identities = 100/310 (32%), Positives = 167/310 (53%)
Query: 498 GDILLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGR 557
G +L+FL G +EI + + K V ++S + + Q ++ + P G R
Sbjct: 623 GAVLIFLPGYDEIVGLRDRILFDDKRFADSTHRYQVFMLHSNMQTSDQKKVLKNPPAGVR 682
Query: 558 KVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGR 617
K++++TNIAE S+T++ + +VID G K+ ++ + L + IS+ASA+QR GRAGR
Sbjct: 683 KIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGR 742
Query: 618 TGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFV--DPPSP 675
PG C+RL++ +++ + T PE+ R+ L L K + N DF+ P P
Sbjct: 743 CRPGICFRLFSRLRFQNMLEFQT-PELLRMPLQELCLHTKLLAPVNCPIADFLMKAPEPP 801
Query: 676 QALI--SAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTII 733
ALI +A++ L ++ A+D LT+LG +A+ P++P L KM+L +V L C D ILTI
Sbjct: 802 PALIVRNAVQMLKTIDAMDTWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIA 861
Query: 734 AMIQTGHIFTRPRERQAKADEK--RARFFQPE-GDHLTLLAVYEAW-KAKN--FSLPWCG 787
+ F P + K R RF DH+ LL ++AW KA++ + +C
Sbjct: 862 CTLAYRDPFVLPTQASQKRAAMLCRKRFTAGAFSDHMALLRAFQAWQKARSDGWERAFCE 921
Query: 788 ENFVNSRSLK 797
+NF++ +++
Sbjct: 922 KNFLSQATME 931
>DICTYBASE|DDB_G0267516 [details] [associations]
symbol:dhx57 "RWD domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908
PROSITE:PS51194 SMART:SM00490 SMART:SM00591 SMART:SM00847
dictyBase:DDB_G0267516 GO:GO:0005524 GenomeReviews:CM000150_GR
EMBL:AAFI02000003 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K13026
RefSeq:XP_647095.1 ProteinModelPortal:Q55GT9
EnsemblProtists:DDB0235268 GeneID:8615899 KEGG:ddi:DDB_G0267516
OMA:EVHERST Uniprot:Q55GT9
Length = 1451
Score = 394 (143.8 bits), Expect = 2.2e-67, Sum P(2) = 2.2e-67
Identities = 86/197 (43%), Positives = 129/197 (65%)
Query: 284 EQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTT-KGK---IGC 339
++R SLP+FK K E ++ + +NQV+++ ETG GK+TQ+ QY+ E+ + KG I C
Sbjct: 620 KKRESLPVFKRKKEFLKCLQENQVVVITAETGCGKSTQIPQYILESFISQEKGSECNIVC 679
Query: 340 TQPRRVAATSVAKRVAEEFGC-----RLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREI 394
TQPRR++A VA+RV+ E+ C +G VGY IR E T + + T G+LLR I
Sbjct: 680 TQPRRISAIGVAERVSYEWNCGTVENSIGGLVGYQIRNESKRSQSTRLLFCTTGILLRRI 739
Query: 395 LIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFF 454
L N+S S I++DE HER+ + D L +L++++ +R DL++I+ SATL+A++ + YF
Sbjct: 740 LDVSNISDLSHIIIDEVHERSTDNDFLLIILREIISKRKDLKIILMSATLNAKQIANYF- 798
Query: 455 NC---NIFSIPGRTFPV 468
C +IFSIPG TFPV
Sbjct: 799 KCTDDSIFSIPGFTFPV 815
Score = 381 (139.2 bits), Expect = 2.2e-67, Sum P(2) = 2.2e-67
Identities = 108/345 (31%), Positives = 180/345 (52%)
Query: 468 VDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEKIKALGKD 527
+ I+ R + D ++S ++ ++ V + + IL+F+ G +I C L + I +
Sbjct: 870 ISIDQKRINL-DVVESLILHLVN-GVLKKDKSILVFVPGLSDILELCSRLGKPISTFTEA 927
Query: 528 VPELV-VLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQ 586
+ + + +P++S+L + Q ++FE AP G KVV+ATNIAE S+TI+ + V+D G Q
Sbjct: 928 ICQRIWCVPLHSSLSPKDQQKVFEKAPNGRVKVVIATNIAETSITIEDVEIVVDCGRVNQ 987
Query: 587 NVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQR 646
+N + S+AS QRAGRAGRT G C++++T+S S++ PEI R
Sbjct: 988 MTFNSITGNSVMSEEWTSKASCRQRAGRAGRTSSGLCFKVFTKSM-ESQLQDQDTPEILR 1046
Query: 647 INLVHTTLTMKAMGINNLLSF--DF----VDPPSPQALISAMEQLYSLGAL----DEEGL 696
+L L +K NN + DF ++PPS + + S++ +L S+ AL ++
Sbjct: 1047 TSLQQLCLHVKLFLKNNKNTTIQDFLNRAIEPPSSEQIQSSINELISIDALKINQQQQQE 1106
Query: 697 LTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKR 756
LT LG +A P+D + KMLL C D ILTI A + F P ++ + +K
Sbjct: 1107 LTPLGYHLASLPVDVYIGKMLLFGCIFRCLDPILTIAATLNYKSPFLNPPDKTIRPMDK- 1165
Query: 757 ARFFQP-EGDHLTLLAVYEAWKAK---NFSLPWCGENFVNSRSLK 797
F P + DH TL+ Y +W+ +C EN+++ +L+
Sbjct: 1166 --FSSPNQSDHQTLINAYNSWRKSIQDGNEYQFCRENYLSIPTLR 1208
>WB|WBGene00009922 [details] [associations]
symbol:F52B5.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] InterPro:IPR001374 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00393 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0009792 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:Z75541
PIR:T22493 RefSeq:NP_492260.1 ProteinModelPortal:Q20644 SMR:Q20644
STRING:Q20644 PaxDb:Q20644 EnsemblMetazoa:F52B5.3 GeneID:172615
KEGG:cel:CELE_F52B5.3 UCSC:F52B5.3 CTD:172615 WormBase:F52B5.3
InParanoid:Q20644 OMA:NSMPETQ NextBio:876269 Uniprot:Q20644
Length = 1425
Score = 360 (131.8 bits), Expect = 2.7e-67, Sum P(3) = 2.7e-67
Identities = 86/207 (41%), Positives = 126/207 (60%)
Query: 277 RSKLS--IQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQY-LAEAGYTT 333
+SK S +Q+ R SLP K +++++++ V+I+ G TG GKTTQ+ Q+ L EA
Sbjct: 167 KSKCSKELQKVRNSLPASKYCDQVLKSISSCNVVIISGGTGCGKTTQVPQFILDEAHENN 226
Query: 334 KG-KIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLR 392
K ++ TQPRR+AA S+A+RVA E G +G VGY +R + DTV+ Y T G+LLR
Sbjct: 227 KHVRVMVTQPRRIAAISIAERVARERGEPIGRTVGYQVRLDSRRSDDTVLTYCTTGVLLR 286
Query: 393 EILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDA--ERFS 450
+ D S + I++DE HER INTD L L++ +K RPDL++I+ SAT++ + FS
Sbjct: 287 MLTSDPVASGITHIVMDEIHEREINTDYLLIALRECLKMRPDLKVILMSATIEGNMQLFS 346
Query: 451 GYFFN--CNIFSIPGRTFPVDINYSRQ 475
YF N ++ I R F V + Y Q
Sbjct: 347 NYFENHSMDVIRIESRAFDVKVFYLDQ 373
Score = 340 (124.7 bits), Expect = 2.7e-67, Sum P(3) = 2.7e-67
Identities = 94/280 (33%), Positives = 151/280 (53%)
Query: 463 GRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPE-GDILLFLTGQEEIDFACESL-CEK 520
G + + S DY+ L V+Q D P G IL+FL G E+I +++ C K
Sbjct: 611 GEKYNLFYGSSSNNSVDYV--LLDQVIQYLADSPVFGTILVFLPGYEDIQQMLKAIDCWK 668
Query: 521 IKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVID 580
+L K++ ++VLP++S + S IF+ P RK+++ATNIAEAS+TI+ + +V+D
Sbjct: 669 -NSL-KNMKNVIVLPLHSQMTSINHGDIFKSVPKDTRKIILATNIAEASITIEDVIFVVD 726
Query: 581 PGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTT 640
G K+ ++ + +L +L + PI++++A QR+GRAGR G C RLYTE Y S M T
Sbjct: 727 TGKVKEKSFDHEAKLSTLTVKPIARSNADQRSGRAGRVANGYCIRLYTEQEYNS-MPETQ 785
Query: 641 IPEIQRINLVHTTLTMKAMGINNLLSFDFV----DPPSPQALISAMEQLYSLGAL----- 691
I E++R + TL K L +F+ +PP ++++ A+ L +GA
Sbjct: 786 IAEMKRAAIYDVTLHAKLFAPKTLKISEFLSLAPEPPEKESILQAITFLEQIGAFYTPIK 845
Query: 692 ------DEEGLLTKLGKKMAEFPLDPPLSKM--LLASVDL 723
+EEGL + +E P DP L+ + L+A + L
Sbjct: 846 IYDNSGNEEGLKNDEEAENSENPEDPELTDLGRLMARLPL 885
Score = 125 (49.1 bits), Expect = 2.7e-67, Sum P(3) = 2.7e-67
Identities = 32/109 (29%), Positives = 58/109 (53%)
Query: 693 EEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTG--HIFTRPRERQA 750
E+ LT LG+ MA PLDP LS+MLL + L C I+ ++A++ + ++ +R
Sbjct: 869 EDPELTDLGRLMARLPLDPQLSRMLLFGLALKCLTPIVNLVALLASREPYVLALSEDRDL 928
Query: 751 KADEKRARFFQPEGDHLTLLAVYEAWKAKNFSLP--WCGENFVNSRSLK 797
++ K Q DHL + + + +KN S +C ++F+N +++
Sbjct: 929 QSKMKFEMAQQDLSDHLLYIRLCNEFCSKNNSQQNQFCRDHFLNFSTMR 977
Score = 37 (18.1 bits), Expect = 1.7e-27, Sum P(2) = 1.7e-27
Identities = 10/37 (27%), Positives = 20/37 (54%)
Query: 715 KMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAK 751
K++LA+ S I +I ++ TG + + + +AK
Sbjct: 704 KIILATNIAEASITIEDVIFVVDTGKVKEKSFDHEAK 740
>FB|FBgn0002774 [details] [associations]
symbol:mle "maleless" species:7227 "Drosophila melanogaster"
[GO:0005700 "polytene chromosome" evidence=IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;TAS] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0000785 "chromatin"
evidence=IDA] [GO:0007549 "dosage compensation"
evidence=NAS;IMP;TAS] [GO:0009047 "dosage compensation by
hyperactivation of X chromosome" evidence=NAS] [GO:0045433 "male
courtship behavior, veined wing generated song production"
evidence=IGI] [GO:0016456 "X chromosome located dosage compensation
complex, transcription activating" evidence=NAS;TAS] [GO:0005694
"chromosome" evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS]
[GO:0003725 "double-stranded RNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0016457 "dosage
compensation complex assembly involved in dosage compensation by
hyperactivation of X chromosome" evidence=TAS] [GO:0003724 "RNA
helicase activity" evidence=NAS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0048675 "axon extension" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0000805 "X chromosome" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0005665 "DNA-directed RNA polymerase II, core
complex" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001159 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137
PROSITE:PS51194 SMART:SM00358 SMART:SM00490 SMART:SM00847
InterPro:IPR014720 EMBL:AE013599 GO:GO:0005524 GO:GO:0008340
Gene3D:3.30.160.20 GO:GO:0045944 GO:GO:0000785 GO:GO:0003682
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0045433 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0048675 GO:GO:0003724
GeneTree:ENSGT00550000074257 KO:K13184 OMA:DDWIRLQ GO:GO:0016456
EMBL:M74121 EMBL:BT003785 EMBL:BT010267 PIR:B40025
RefSeq:NP_476641.1 RefSeq:NP_724440.1 UniGene:Dm.2901
ProteinModelPortal:P24785 SMR:P24785 IntAct:P24785 MINT:MINT-768581
STRING:P24785 PaxDb:P24785 PRIDE:P24785 EnsemblMetazoa:FBtr0086031
GeneID:35523 KEGG:dme:Dmel_CG11680 CTD:35523 FlyBase:FBgn0002774
InParanoid:P24785 OrthoDB:EOG47H44V PhylomeDB:P24785
GenomeRNAi:35523 NextBio:793836 Bgee:P24785 GermOnline:CG11680
GO:GO:0016457 Uniprot:P24785
Length = 1293
Score = 400 (145.9 bits), Expect = 1.2e-66, Sum P(2) = 1.2e-66
Identities = 95/244 (38%), Positives = 145/244 (59%)
Query: 284 EQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIG----- 338
E R LPI +++E++ A++DN V+I+ G TG GKTTQ+AQY+ + Y G+ G
Sbjct: 379 EFREKLPIAAMRSEILTAINDNPVVIIRGNTGCGKTTQIAQYILD-DYICSGQGGYANIY 437
Query: 339 CTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDC-TGPDTVIKYMTDGMLLREILID 397
TQPRR++A SVA+RVA E +LG+ VGY++RFE P I + T G+LLR++ +
Sbjct: 438 VTQPRRISAISVAERVARERCEQLGDTVGYSVRFESVFPRPYGAILFCTVGVLLRKL--E 495
Query: 398 ENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCN 457
L S I++DE HER +N+D L +L+ +V PDL +I+ SAT+D +FS YF C
Sbjct: 496 AGLRGVSHIIVDEIHERDVNSDFLLVILRDMVDTYPDLHVILMSATIDTTKFSKYFGICP 555
Query: 458 IFSIPGRTFPVDINYSRQ--EVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACE 515
+ +PGR FPV + ++TD++ SA + V++ E L ++E +
Sbjct: 556 VLEVPGRAFPVQQFFLEDIIQMTDFVPSAESRRKRKEVEDEEQ---LLSEDKDEAEINYN 612
Query: 516 SLCE 519
+CE
Sbjct: 613 KVCE 616
Score = 366 (133.9 bits), Expect = 1.2e-66, Sum P(2) = 1.2e-66
Identities = 90/299 (30%), Positives = 153/299 (51%)
Query: 485 LITVLQIHVDEPE--GDILLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPVYSALPS 542
L+ L +H+ G IL+FL G I FA + G D + +LP +S +P
Sbjct: 639 LLEALLMHIKSKNIPGAILVFLPGWNLI-FALMKFLQNTNIFG-DTSQYQILPCHSQIPR 696
Query: 543 EIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITP 602
+ Q ++FEP P G K++++TNIAE S+TID I +VID A+ ++ L S
Sbjct: 697 DEQRKVFEPVPEGVTKIILSTNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVW 756
Query: 603 ISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGIN 662
S+ + QR GRAGR PG C+ L + + +++ + PE+ R L LT+K + +
Sbjct: 757 ASKTNLEQRKGRAGRVRPGFCFTLCSRARFQA-LEDNLTPEMFRTPLHEMALTIKLLRLG 815
Query: 663 NLLSF--DFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLAS 720
++ F ++PP A+I A L + LD LT LG+ +A P++P L KM++
Sbjct: 816 SIHHFLSKALEPPPVDAVIEAEVLLREMRCLDANDELTPLGRLLARLPIEPRLGKMMVLG 875
Query: 721 VDLGCSDEILTIIAMIQT--GHIFTRPRERQAKADEKRARFFQPEGDHLTLLAVYEAWK 777
GC+D ++ I+A + +F+ ++ A+ ++A DH+ ++ + W+
Sbjct: 876 AVFGCAD-LMAIMASYSSTFSEVFSLDIGQRRLANHQKALSGTKCSDHVAMIVASQMWR 933
>UNIPROTKB|E2QZR7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 GO:GO:0008026
InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882 OMA:RAFWESS
EMBL:AAEX03007702 Ensembl:ENSCAFT00000000357 Uniprot:E2QZR7
Length = 1376
Score = 384 (140.2 bits), Expect = 2.4e-66, Sum P(2) = 2.4e-66
Identities = 100/308 (32%), Positives = 167/308 (54%)
Query: 500 ILLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKV 559
IL+FL G +EI + + K + V ++S + + Q ++ + P G RK+
Sbjct: 625 ILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKI 684
Query: 560 VVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTG 619
+++TNIAE S+T++ + +VID G K+ ++ + L + IS+ASA+QR GRAGR
Sbjct: 685 ILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAVQRKGRAGRCR 744
Query: 620 PGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFV--DPPSPQA 677
PG C+RL++ +++ + T PE+ R+ L L K + N DF+ P P A
Sbjct: 745 PGICFRLFSRLRFQNMLEFQT-PELLRMPLQELCLHTKLLAPVNCPIADFLMKAPEPPPA 803
Query: 678 LI--SAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAM 735
LI +A++ L ++ A+D LT+LG +A+ P++P L KM+L +V L C D ILTI
Sbjct: 804 LIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACT 863
Query: 736 IQTGHIFTRPRERQAKADEK--RARFFQPE-GDHLTLLAVYEAW-KAKN--FSLPWCGEN 789
+ F P + K R RF DH+ LL ++AW KA++ + +C +N
Sbjct: 864 LAYRDPFVLPTQASQKRAAMLCRKRFTAGTFSDHMALLRAFQAWQKARSDGWERAFCEKN 923
Query: 790 FVNSRSLK 797
F++ +++
Sbjct: 924 FLSQATME 931
Score = 381 (139.2 bits), Expect = 2.4e-66, Sum P(2) = 2.4e-66
Identities = 79/197 (40%), Positives = 127/197 (64%)
Query: 276 QRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTT-- 333
+R + R+SLP+F+ + E+++ + +N+V++++GETGSGKTTQ+ Q+L + +
Sbjct: 179 KRGESEFDSFRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGI 238
Query: 334 KGKIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDC-TGPDTVIKYMTDGMLLR 392
+I CTQPRR+AA +VA+RVA E R+G+ +GY IR E P T++ + T+G+LLR
Sbjct: 239 PCRIFCTQPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRRVSPKTLLTFCTNGVLLR 298
Query: 393 EILI-DENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSG 451
++ D LS + +++DE HER +D L L+ L+++ P L+LI++SA LD F
Sbjct: 299 TLMAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIR 358
Query: 452 YFFNCNIFSIPGRTFPV 468
YF +C + I GR F V
Sbjct: 359 YFGSCPVIYIQGRPFEV 375
>SGD|S000004411 [details] [associations]
symbol:YLR419W "Putative helicase with limited sequence
similarity to human Rb protein" species:4932 "Saccharomyces
cerevisiae" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00591 SMART:SM00847
SGD:S000004411 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
EMBL:BK006945 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:U20162
RefSeq:NP_013525.3 GeneID:851140 KEGG:sce:YLR421C KO:K06691
HOGENOM:HOG000167651 OMA:GWARIGV OrthoDB:EOG4Z65WS
RefSeq:NP_013523.3 GeneID:851137 KEGG:sce:YLR419W PIR:S59384
ProteinModelPortal:Q06698 SMR:Q06698 IntAct:Q06698
MINT:MINT-2492948 STRING:Q06698 PaxDb:Q06698 PeptideAtlas:Q06698
PRIDE:Q06698 EnsemblFungi:YLR419W CYGD:YLR419w
GeneTree:ENSGT00680000101018 NextBio:967890 Genevestigator:Q06698
GermOnline:YLR419W Uniprot:Q06698
Length = 1435
Score = 390 (142.3 bits), Expect = 1.9e-65, Sum P(3) = 1.9e-65
Identities = 104/292 (35%), Positives = 164/292 (56%)
Query: 498 GDILLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGR 557
G I++FL G EI+ C L K + + +VLP++SAL E Q R+F+ G R
Sbjct: 864 GSIIVFLPGVGEINKCCNLLANK-----SNEADFMVLPLHSALTPEDQKRVFKKYH-GKR 917
Query: 558 KVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGR 617
KVVV+TNIAE S+TID ID G AK YNPK L+ + IS+A QR GRAGR
Sbjct: 918 KVVVSTNIAETSITIDDCVATIDTGRAKSMFYNPKDNTTKLIESFISKAEVKQRRGRAGR 977
Query: 618 TGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSF--DFVDPPSP 675
G Y+L++++ Y ++M IPEI+RI L L++KAMGI ++ +F +D P
Sbjct: 978 VREGLSYKLFSKNLYENDMISMPIPEIKRIPLESLYLSVKAMGIKDVKAFLSTALDAPPL 1037
Query: 676 QALISAMEQLYSLGALDE-EGLLTKLGKKMAEFP-LDPPLSKMLLASVDLGCSDEILTII 733
AL A L ++G +DE + LT+LG+ ++ P +D K+L+ + GC+D + ++
Sbjct: 1038 PALQKAERILTTIGLVDESDKSLTQLGQFISLMPVMDSKHGKLLIYGILFGCTDISVLLV 1097
Query: 734 AMIQTGHI-FTRPRERQAKADEKRARFFQPEGDHLTLLAVY-EAWKAKNFSL 783
+++ G + F E + K + ++ + GD +L + + +K K+ S+
Sbjct: 1098 SILGIGVLPFIGGFENREKIKKLLCKY-ESRGDLFAVLEIVRDYFKIKDSSI 1148
Score = 376 (137.4 bits), Expect = 1.9e-65, Sum P(3) = 1.9e-65
Identities = 94/277 (33%), Positives = 156/277 (56%)
Query: 281 SIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLA-----EAGYTTKG 335
S+Q R LP +K + +I ++ N+V+++ GETGSGK+TQ+ Q++ E G K
Sbjct: 596 SMQLVREQLPAWKKQKVIIDIINKNEVVLITGETGSGKSTQVVQFILDFLQKEKGDFGKT 655
Query: 336 KIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREIL 395
KI CTQPRR++A +A+RV++E GEEVGY IR + T T IK+MT G+L+R +
Sbjct: 656 KIVCTQPRRISAIGLAERVSDERCVTCGEEVGYVIRGVNKTKASTRIKFMTTGVLVRLLQ 715
Query: 396 IDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFN 455
+ + +++++DE HER+I+TD++ L+K L+ R +++++ SAT++ + F +F
Sbjct: 716 NARTMLENTIVVIDEVHERSIDTDLIVTLMKNLLHRVRGMKIVLMSATVNVDLFKKFFPG 775
Query: 456 CNIFSIPGRTFPVDINYSRQEVTDYLDSAL-----ITVLQIHVDE---------PEGDIL 501
I GRTFP+ +Y +++ LD + ++ VDE P D
Sbjct: 776 LATCHIEGRTFPIT-DYFLEDILSDLDFKIKREKALSYDDDSVDERNNDDQYLKPRADSK 834
Query: 502 LFLTGQEEIDFAC---ESLCEKIKALGKDVPELVVLP 535
F +GQ D C E + +++KA + +V LP
Sbjct: 835 FFTSGQINYDLLCQVVEYVHKRLKAANDNGSIIVFLP 871
Score = 39 (18.8 bits), Expect = 1.9e-65, Sum P(3) = 1.9e-65
Identities = 20/84 (23%), Positives = 37/84 (44%)
Query: 188 KVFKNPEGSLSRTAALQSALTKERREVREQQLRTMIDSIPKDLNRPW--EDPMP----ET 241
K+ NP G L + + A+ K R + + R++ +S + + ED + E
Sbjct: 530 KIIDNP-GPLIPDSDSKGAINK--RNISNGK-RSINNSSSRKFTKTTISEDTLSVLREEY 585
Query: 242 GERHLAQELRGVGLSARDMPEWKK 265
+R + E + + L +P WKK
Sbjct: 586 TKRIKSSEYKSMQLVREQLPAWKK 609
>UNIPROTKB|F1N0J0 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9913 "Bos taurus" [GO:0042645 "mitochondrial nucleoid"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 IPI:IPI00717186 UniGene:Bt.24588 OMA:LHKEERY
EMBL:DAAA02054438 Ensembl:ENSBTAT00000030623 Uniprot:F1N0J0
Length = 1220
Score = 407 (148.3 bits), Expect = 2.7e-65, Sum P(2) = 2.7e-65
Identities = 106/304 (34%), Positives = 163/304 (53%)
Query: 481 LDSALITVLQIHVD---EPEGDILLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPVY 537
LD L+T L +H+D EP G IL FL G +EI + L E ALG + ++LPV+
Sbjct: 676 LDLDLVTDLVLHIDARGEP-GGILCFLPGWQEIKGVQQRLQE---ALGMHESKYLILPVH 731
Query: 538 SALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDS 597
S +P Q IF+ P G RK+V+ATNIAE S+TI+ I +V+D G K+ Y+ K ++
Sbjct: 732 SNIPMMDQKAIFQQPPIGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSC 791
Query: 598 LVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMK 657
L +S+A+ +QR GRAGR G Y L+ S +M+P +PEI R L + L K
Sbjct: 792 LETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLE-KMAPFQVPEILRTPLENLVLQAK 850
Query: 658 A-MGINNLLSF--DFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLS 714
M + F VD P+ +A+ A+ L +G LD+ LT LG+++A DP L+
Sbjct: 851 IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLA 910
Query: 715 KMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQPEG-DHLTLLAVY 773
K ++ + C +L +++ + T F+ + +A+ D+ +A G DHL +
Sbjct: 911 KAIVLAAIFRCLHPLLVVVSCL-TRDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAV 969
Query: 774 EAWK 777
W+
Sbjct: 970 SGWE 973
Score = 345 (126.5 bits), Expect = 2.7e-65, Sum P(2) = 2.7e-65
Identities = 77/202 (38%), Positives = 120/202 (59%)
Query: 277 RSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGK 336
R + + ++ LP+ ++ ++ A+ + V+++ G+TG GKTT++ Q L E Y T+G+
Sbjct: 448 RRRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVIAGDTGCGKTTRIPQLLLER-YVTEGR 506
Query: 337 -IGC----TQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCT-GPDTVIKYMTDGML 390
C TQPRR++A SVA+RV+ E G L VG+ +R E + + T G+L
Sbjct: 507 GARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGIL 566
Query: 391 LREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFS 450
LR++ + +L S +++DE HER +NTD L LLK L + P LRL++ SAT D ERFS
Sbjct: 567 LRKLQSNPSLEGVSHVVVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFS 626
Query: 451 GYFFNCNIFSIPGRTFPVDINY 472
YF C + +PG +PV +Y
Sbjct: 627 RYFGGCPVIKVPGFMYPVKEHY 648
>UNIPROTKB|Q2NKY8 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9913 "Bos taurus" [GO:0042645 "mitochondrial nucleoid"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003682 GO:GO:0003723 GO:GO:0042645
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:BC111349
IPI:IPI00717186 RefSeq:NP_001070003.1 UniGene:Bt.24588
ProteinModelPortal:Q2NKY8 SMR:Q2NKY8 PRIDE:Q2NKY8 GeneID:767607
KEGG:bta:767607 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
InParanoid:Q2NKY8 KO:K13185 OrthoDB:EOG4VHK5M NextBio:20918019
Uniprot:Q2NKY8
Length = 1220
Score = 407 (148.3 bits), Expect = 3.4e-65, Sum P(2) = 3.4e-65
Identities = 106/304 (34%), Positives = 163/304 (53%)
Query: 481 LDSALITVLQIHVD---EPEGDILLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPVY 537
LD L+T L +H+D EP G IL FL G +EI + L E ALG + ++LPV+
Sbjct: 676 LDLDLVTDLVLHIDARGEP-GGILCFLPGWQEIKGVQQRLQE---ALGMHESKYLILPVH 731
Query: 538 SALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDS 597
S +P Q IF+ P G RK+V+ATNIAE S+TI+ I +V+D G K+ Y+ K ++
Sbjct: 732 SNIPMMDQKAIFQQPPIGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSC 791
Query: 598 LVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMK 657
L +S+A+ +QR GRAGR G Y L+ S +M+P +PEI R L + L K
Sbjct: 792 LETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLE-KMAPFQVPEILRTPLENLVLQAK 850
Query: 658 A-MGINNLLSF--DFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLS 714
M + F VD P+ +A+ A+ L +G LD+ LT LG+++A DP L+
Sbjct: 851 IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLA 910
Query: 715 KMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQPEG-DHLTLLAVY 773
K ++ + C +L +++ + T F+ + +A+ D+ +A G DHL +
Sbjct: 911 KAIVLAAIFRCLHPLLVVVSCL-TRDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAV 969
Query: 774 EAWK 777
W+
Sbjct: 970 SGWE 973
Score = 344 (126.2 bits), Expect = 3.4e-65, Sum P(2) = 3.4e-65
Identities = 77/202 (38%), Positives = 120/202 (59%)
Query: 277 RSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGK 336
R + + ++ LP+ ++ ++ A+ + V+++ G+TG GKTT++ Q L E Y T+G+
Sbjct: 448 RRRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVIAGDTGCGKTTRIPQLLLER-YVTEGR 506
Query: 337 -IGC----TQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCT-GPDTVIKYMTDGML 390
C TQPRR++A SVA+RV+ E G L VG+ +R E + + T G+L
Sbjct: 507 GARCNVIITQPRRISAVSVAQRVSHELGPTLRRNVGFQVRLESKPPARGGALLFCTVGIL 566
Query: 391 LREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFS 450
LR++ + +L S +++DE HER +NTD L LLK L + P LRL++ SAT D ERFS
Sbjct: 567 LRKLQSNPSLEGVSHVVVDEEHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFS 626
Query: 451 GYFFNCNIFSIPGRTFPVDINY 472
YF C + +PG +PV +Y
Sbjct: 627 RYFGGCPVIKVPGFMYPVKEHY 648
>UNIPROTKB|F1SLI4 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0042645 "mitochondrial nucleoid" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:LHKEERY EMBL:CU633694 Ensembl:ENSSSCT00000012419
Uniprot:F1SLI4
Length = 1222
Score = 405 (147.6 bits), Expect = 4.5e-65, Sum P(2) = 4.5e-65
Identities = 106/304 (34%), Positives = 162/304 (53%)
Query: 481 LDSALITVLQIHVD---EPEGDILLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPVY 537
LD L+T L +H+D EP G IL FL G +EI + L E ALG + ++LPV+
Sbjct: 678 LDLDLVTDLVLHIDARGEP-GGILCFLPGWQEIKGVQQRLQE---ALGMHESKYLILPVH 733
Query: 538 SALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDS 597
S +P Q IF+ P G RK+V+ATNIAE S+TI+ I +V+D G K+ Y+ K ++
Sbjct: 734 SNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSC 793
Query: 598 LVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMK 657
L +S+A+ +QR GRAGR G Y L+ S +M P +PEI R L + L K
Sbjct: 794 LETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLE-KMVPFQVPEILRTPLENLVLQAK 852
Query: 658 A-MGINNLLSF--DFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLS 714
M + F VD P+ +A+ A+ L +G LD+ LT LG+++A DP L+
Sbjct: 853 IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLA 912
Query: 715 KMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQPEG-DHLTLLAVY 773
K ++ + C +L +++ + T F+ + +A+ D+ +A G DHL +
Sbjct: 913 KAIVLAAIFRCLHPLLVVVSCL-TRDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAV 971
Query: 774 EAWK 777
W+
Sbjct: 972 SGWE 975
Score = 345 (126.5 bits), Expect = 4.5e-65, Sum P(2) = 4.5e-65
Identities = 77/202 (38%), Positives = 120/202 (59%)
Query: 277 RSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGK 336
R + + ++ LP+ ++ ++ A+ + V+++ G+TG GKTT++ Q L E Y T+G+
Sbjct: 450 RRRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVIAGDTGCGKTTRIPQLLLER-YVTEGR 508
Query: 337 -IGC----TQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCT-GPDTVIKYMTDGML 390
C TQPRR++A SVA+RV+ E G L VG+ +R E + + T G+L
Sbjct: 509 GARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGIL 568
Query: 391 LREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFS 450
LR++ + +L S +++DE HER +NTD L LLK L + P LRL++ SAT D ERFS
Sbjct: 569 LRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFS 628
Query: 451 GYFFNCNIFSIPGRTFPVDINY 472
YF C + +PG +PV +Y
Sbjct: 629 RYFGGCPVIKVPGFMYPVKEHY 650
>UNIPROTKB|D4A1V3 [details] [associations]
symbol:Dhx30 "Putative ATP-dependent RNA helicase DHX30"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308888 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676 GO:GO:0042645
EMBL:CH473954 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:LHKEERY
UniGene:Rn.163034 IPI:IPI00203041 Ensembl:ENSRNOT00000045878
Uniprot:D4A1V3
Length = 1222
Score = 402 (146.6 bits), Expect = 4.7e-65, Sum P(2) = 4.7e-65
Identities = 105/304 (34%), Positives = 162/304 (53%)
Query: 481 LDSALITVLQIHVD---EPEGDILLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPVY 537
LD L+T L +H+D EP G IL FL G +EI + L E ALG + ++LPV+
Sbjct: 678 LDLDLVTDLVLHIDARGEP-GGILCFLPGWQEIKGVQQRLQE---ALGMHESKYLILPVH 733
Query: 538 SALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDS 597
S +P Q IF+ P G RK+V+ATNIAE S+T++ I +V+D G K+ Y+ K ++
Sbjct: 734 SNIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSC 793
Query: 598 LVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMK 657
L +S+A+ +QR GRAGR G Y L+ S +M P +PEI R L + L K
Sbjct: 794 LETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLE-KMVPFQVPEILRTPLENLVLQAK 852
Query: 658 A-MGINNLLSF--DFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLS 714
M + F VD P+ +A+ A+ L +G LD+ LT LG+++A DP L+
Sbjct: 853 IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLA 912
Query: 715 KMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQPEG-DHLTLLAVY 773
K ++ + C +L +++ + T F+ + +A+ D+ +A G DHL +
Sbjct: 913 KAIVLAAIFRCLHPLLVVVSCL-TRDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAV 971
Query: 774 EAWK 777
W+
Sbjct: 972 AGWE 975
Score = 348 (127.6 bits), Expect = 4.7e-65, Sum P(2) = 4.7e-65
Identities = 99/290 (34%), Positives = 152/290 (52%)
Query: 193 PEGSLSRTAALQSALTKERREVREQQLRTMIDSI-P--KDLNRPWEDPMPETGERHLA-Q 248
PE L + A S + + +LR D I P KD + P DP+ TG+ ++
Sbjct: 379 PEPILRKIEAFLSHYPVDSSWI-SPELRLQSDDILPLGKD-SGPLSDPI--TGKPYMPLS 434
Query: 249 ELRGVGLSARDMPEWKKNAYGKAFTFGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVL 308
E V LS + W++ I ++ LP+ ++ ++ A+ + V+
Sbjct: 435 EAEEVRLSQSLLELWRRRG-------------PIWQEAPQLPVDPHRDTILSAIEQHPVV 481
Query: 309 ILIGETGSGKTTQLAQYLAEAGYTTKGK-IGC----TQPRRVAATSVAKRVAEEFGCRLG 363
++ G+TG GKTT++ Q L E Y T+G+ C TQPRR++A SVA+RV+ E G L
Sbjct: 482 VISGDTGCGKTTRIPQLLLER-YVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLR 540
Query: 364 EEVGYAIRFEDCT-GPDTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLF 422
VG+ +R E + + T G+LLR++ + +L S +++DE HER +NTD L
Sbjct: 541 RNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLL 600
Query: 423 GLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPVDINY 472
LLK L + P LRL++ SAT D ERFS YF C + +PG +PV +Y
Sbjct: 601 ILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHY 650
>UNIPROTKB|H7BXY3 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HGNC:HGNC:16716 EMBL:AC139667 EMBL:AC026318
ProteinModelPortal:H7BXY3 SMR:H7BXY3 PRIDE:H7BXY3
Ensembl:ENST00000348968 Bgee:H7BXY3 Uniprot:H7BXY3
Length = 1166
Score = 404 (147.3 bits), Expect = 4.9e-65, Sum P(2) = 4.9e-65
Identities = 106/304 (34%), Positives = 162/304 (53%)
Query: 481 LDSALITVLQIHVD---EPEGDILLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPVY 537
LD L+T L +H+D EP G IL FL G +EI + L E ALG + ++LPV+
Sbjct: 622 LDLDLVTDLVLHIDARGEP-GGILCFLPGWQEIKGVQQRLQE---ALGMHESKYLILPVH 677
Query: 538 SALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDS 597
S +P Q IF+ P G RK+V+ATNIAE S+TI+ I +V+D G K+ Y+ K ++
Sbjct: 678 SNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSC 737
Query: 598 LVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMK 657
L +S+A+ +QR GRAGR G Y L+ S +M P +PEI R L + L K
Sbjct: 738 LETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLE-KMVPFQVPEILRTPLENLVLQAK 796
Query: 658 A-MGINNLLSF--DFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLS 714
M + F VD P+ +A+ A+ L +G LD+ LT LG+++A DP L+
Sbjct: 797 IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLA 856
Query: 715 KMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQPEG-DHLTLLAVY 773
K ++ + C +L +++ + T F+ + +A+ D+ +A G DHL +
Sbjct: 857 KAIVLAAIFRCLHPLLVVVSCL-TRDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAV 915
Query: 774 EAWK 777
W+
Sbjct: 916 AGWE 919
Score = 345 (126.5 bits), Expect = 4.9e-65, Sum P(2) = 4.9e-65
Identities = 78/203 (38%), Positives = 121/203 (59%)
Query: 277 RSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGK 336
R + + ++ LP+ ++ ++ A+ + V+++ G+TG GKTT++ Q L E Y T+G+
Sbjct: 394 RRRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLER-YVTEGR 452
Query: 337 -IGC----TQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDT--VIKYMTDGM 389
C TQPRR++A SVA+RV+ E G L VG+ +R E P + + T G+
Sbjct: 453 GARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLES-KPPSRGGALLFCTVGI 511
Query: 390 LLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERF 449
LLR++ + +L S +++DE HER +NTD L LLK L + P LRL++ SAT D ERF
Sbjct: 512 LLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERF 571
Query: 450 SGYFFNCNIFSIPGRTFPVDINY 472
S YF C + +PG +PV +Y
Sbjct: 572 SRYFGGCPVIKVPGFMYPVKEHY 594
>UNIPROTKB|F1P1F4 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9031 "Gallus gallus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0042645
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 IPI:IPI00593383 OMA:LHKEERY EMBL:AADN02000053
Ensembl:ENSGALT00000008045 Uniprot:F1P1F4
Length = 1231
Score = 395 (144.1 bits), Expect = 5.4e-65, Sum P(2) = 5.4e-65
Identities = 110/306 (35%), Positives = 165/306 (53%)
Query: 481 LDSALITVLQIHVD---EPEGDILLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPVY 537
LD LIT L + +D EP G IL FL G +EI + L E LG +VLPV+
Sbjct: 693 LDLDLITDLVLQIDAHGEP-GGILCFLPGWQEIKGVQQRLLEM---LGSQNSRYLVLPVH 748
Query: 538 SALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDS 597
S +P Q IF+ PPG RK+V+ATNIAE S+TI+ I +V+D G K+ Y+ K ++
Sbjct: 749 SNIPMMDQQNIFQRPPPGVRKIVLATNIAETSITINDIVHVVDSGTHKEERYDLKTKVSC 808
Query: 598 LVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPT-TIPEIQRINLVHTTLTM 656
L +S+++ +QR GRAGR G Y L+ S R + PT +PEI R L + +
Sbjct: 809 LETVWVSKSNVVQRRGRAGRCQSGFAYHLFPRS--RLDKMPTYQVPEILRTPLENLVVQA 866
Query: 657 KA-MGINNLLSF--DFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPL 713
K M + F +D P +A+ A+ L +G LD+ LT LGK++A+ DP L
Sbjct: 867 KIHMPEKTAVEFLSKALDSPDIKAVDEAVILLQEIGVLDQREALTTLGKRLAQISTDPRL 926
Query: 714 SK-MLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQPEG-DHLTLLA 771
+K ++LAS+ C +L I++ + T F+ + +A+ D+ +A + G DHL +
Sbjct: 927 AKAIVLASI-YRCLHPLLVIVSCL-TRDPFSSSLQNRAEVDKAKAVLSRESGSDHLAFVR 984
Query: 772 VYEAWK 777
W+
Sbjct: 985 AVAGWE 990
Score = 355 (130.0 bits), Expect = 5.4e-65, Sum P(2) = 5.4e-65
Identities = 78/200 (39%), Positives = 122/200 (61%)
Query: 284 EQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGK-----IG 338
++ LP+ K+ ++ A+ N V+++ G+TG GKTT++ Q L E Y +G+ +
Sbjct: 473 QESHPLPVDPHKDTILSAIEQNPVVVIAGDTGCGKTTRIPQLLLEH-YILEGRGARCNVV 531
Query: 339 CTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCT-GPDTVIKYMTDGMLLREILID 397
TQPRR++A SVA+RVA+E G + + VGY +R E + + T G+LLR++ +
Sbjct: 532 ITQPRRISAISVAQRVAQELGPNMRKNVGYQVRLESKPPARGGALLFCTVGILLRKLQGN 591
Query: 398 ENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCN 457
+L S +++DE HER +NTD L LLK + K PDLRL++ SAT D +RFS YF +C
Sbjct: 592 PSLEGVSHVVVDEVHERDVNTDFLLILLKGIQKLNPDLRLVLMSATGDNQRFSHYFGDCP 651
Query: 458 IFSIPGRTFPVDINYSRQEV 477
+ +PG +PV Y +E+
Sbjct: 652 VVKVPGFMYPVK-EYYLEEI 670
Score = 39 (18.8 bits), Expect = 8.8e-32, Sum P(2) = 8.8e-32
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 466 FPVDINYSRQEVTD 479
+PVDI SR + D
Sbjct: 412 YPVDIRESRPRIAD 425
>MGI|MGI:1920081 [details] [associations]
symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box polypeptide 30"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0042645 "mitochondrial
nucleoid" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 MGI:MGI:1920081 GO:GO:0005524
GO:GO:0003682 GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OMA:LHKEERY EMBL:AB047557 EMBL:AK146326 EMBL:AK148778
EMBL:AK153969 EMBL:BC004082 EMBL:BC016202 IPI:IPI00127902
IPI:IPI00270064 IPI:IPI00761204 RefSeq:NP_001239611.1
RefSeq:NP_001239612.1 RefSeq:NP_579925.1 UniGene:Mm.276305
ProteinModelPortal:Q99PU8 SMR:Q99PU8 PhosphoSite:Q99PU8
PaxDb:Q99PU8 PRIDE:Q99PU8 Ensembl:ENSMUST00000035056
Ensembl:ENSMUST00000062368 Ensembl:ENSMUST00000111991
Ensembl:ENSMUST00000136969 Ensembl:ENSMUST00000142911
Ensembl:ENSMUST00000148287 Ensembl:ENSMUST00000165596 GeneID:72831
KEGG:mmu:72831 UCSC:uc009rtg.1 UCSC:uc009rth.1 UCSC:uc009rti.1
ChiTaRS:DHX30 NextBio:337009 Bgee:Q99PU8 CleanEx:MM_DHX30
Genevestigator:Q99PU8 GermOnline:ENSMUSG00000032480 Uniprot:Q99PU8
Length = 1217
Score = 402 (146.6 bits), Expect = 5.7e-65, Sum P(3) = 5.7e-65
Identities = 105/304 (34%), Positives = 162/304 (53%)
Query: 481 LDSALITVLQIHVD---EPEGDILLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPVY 537
LD L+T L +H+D EP G IL FL G +EI + L E ALG + ++LPV+
Sbjct: 673 LDLDLVTDLVLHIDARGEP-GGILCFLPGWQEIKGVQQRLQE---ALGMHESKYLILPVH 728
Query: 538 SALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDS 597
S +P Q IF+ P G RK+V+ATNIAE S+T++ I +V+D G K+ Y+ K ++
Sbjct: 729 SNIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSC 788
Query: 598 LVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMK 657
L +S+A+ +QR GRAGR G Y L+ S +M P +PEI R L + L K
Sbjct: 789 LETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLE-KMVPFQVPEILRTPLENLVLQAK 847
Query: 658 A-MGINNLLSF--DFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLS 714
M + F VD P+ +A+ A+ L +G LD+ LT LG+++A DP L+
Sbjct: 848 IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLA 907
Query: 715 KMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQPEG-DHLTLLAVY 773
K ++ + C +L +++ + T F+ + +A+ D+ +A G DHL +
Sbjct: 908 KAIVLAAIFRCLHPLLVVVSCL-TRDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAV 966
Query: 774 EAWK 777
W+
Sbjct: 967 AGWE 970
Score = 348 (127.6 bits), Expect = 5.7e-65, Sum P(3) = 5.7e-65
Identities = 99/290 (34%), Positives = 152/290 (52%)
Query: 193 PEGSLSRTAALQSALTKERREVREQQLRTMIDSI-P--KDLNRPWEDPMPETGERHLA-Q 248
PE L + A S + + +LR D I P KD + P DP+ TG+ ++
Sbjct: 374 PEPILRKIEAFLSHYPVDSSWI-SPELRLQSDDILPLGKD-SGPLSDPI--TGKPYMPLS 429
Query: 249 ELRGVGLSARDMPEWKKNAYGKAFTFGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVL 308
E V LS + W++ I ++ LP+ ++ ++ A+ + V+
Sbjct: 430 EAEEVRLSQSLLELWRRRG-------------PIWQEAPQLPVDPHRDTILSAIEQHPVV 476
Query: 309 ILIGETGSGKTTQLAQYLAEAGYTTKGK-IGC----TQPRRVAATSVAKRVAEEFGCRLG 363
++ G+TG GKTT++ Q L E Y T+G+ C TQPRR++A SVA+RV+ E G L
Sbjct: 477 VISGDTGCGKTTRIPQLLLER-YVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLR 535
Query: 364 EEVGYAIRFEDCT-GPDTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLF 422
VG+ +R E + + T G+LLR++ + +L S +++DE HER +NTD L
Sbjct: 536 RNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLL 595
Query: 423 GLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPVDINY 472
LLK L + P LRL++ SAT D ERFS YF C + +PG +PV +Y
Sbjct: 596 ILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHY 645
Score = 46 (21.3 bits), Expect = 5.7e-65, Sum P(3) = 5.7e-65
Identities = 14/39 (35%), Positives = 18/39 (46%)
Query: 102 FENDR-ERSGRYCKSNPPMLKDMPVSRMGGVSGVLASNE 139
F DR + R CK PP L M V+ G + AS +
Sbjct: 30 FRKDRTQHRQRQCKLPPPRLPPMCVNPAPGGTITRASRD 68
>UNIPROTKB|Q5ZI74 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9031 "Gallus gallus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0042645
"mitochondrial nucleoid" evidence=ISS] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003682
GO:GO:0042645 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:AJ720910 IPI:IPI00593383
RefSeq:NP_001012869.1 UniGene:Gga.2762 ProteinModelPortal:Q5ZI74
SMR:Q5ZI74 GeneID:420376 KEGG:gga:420376 InParanoid:Q5ZI74
NextBio:20823291 Uniprot:Q5ZI74
Length = 1231
Score = 395 (144.1 bits), Expect = 6.8e-65, Sum P(2) = 6.8e-65
Identities = 110/306 (35%), Positives = 165/306 (53%)
Query: 481 LDSALITVLQIHVD---EPEGDILLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPVY 537
LD LIT L + +D EP G IL FL G +EI + L E LG +VLPV+
Sbjct: 693 LDLDLITDLVLQIDAHGEP-GGILCFLPGWQEIKGVQQRLLEM---LGSQNSRYLVLPVH 748
Query: 538 SALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDS 597
S +P Q IF+ PPG RK+V+ATNIAE S+TI+ I +V+D G K+ Y+ K ++
Sbjct: 749 SNIPMMDQQNIFQRPPPGVRKIVLATNIAETSITINDIVHVVDSGTHKEERYDLKTKVSC 808
Query: 598 LVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPT-TIPEIQRINLVHTTLTM 656
L +S+++ +QR GRAGR G Y L+ S R + PT +PEI R L + +
Sbjct: 809 LETVWVSKSNVVQRRGRAGRCQSGFAYHLFPRS--RLDKMPTYQVPEILRTPLENLVVQA 866
Query: 657 KA-MGINNLLSF--DFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPL 713
K M + F +D P +A+ A+ L +G LD+ LT LGK++A+ DP L
Sbjct: 867 KIHMPEKTAVEFLSKALDSPDIKAVDEAVILLQEIGVLDQREALTTLGKRLAQISTDPRL 926
Query: 714 SK-MLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQPEG-DHLTLLA 771
+K ++LAS+ C +L I++ + T F+ + +A+ D+ +A + G DHL +
Sbjct: 927 AKAIVLASI-YRCLHPLLVIVSCL-TRDPFSSSLQNRAEVDKAKAVLSRESGSDHLAFVR 984
Query: 772 VYEAWK 777
W+
Sbjct: 985 AVAGWE 990
Score = 354 (129.7 bits), Expect = 6.8e-65, Sum P(2) = 6.8e-65
Identities = 78/200 (39%), Positives = 121/200 (60%)
Query: 284 EQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGK-----IG 338
++ LP+ K+ ++ A+ N V+++ G+TG GKTT++ Q L E Y +G+ +
Sbjct: 473 QESHPLPVDPHKDTILSAIEQNPVVVIAGDTGCGKTTRIPQLLLEH-YILEGRGARCNVV 531
Query: 339 CTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCT-GPDTVIKYMTDGMLLREILID 397
TQPRR++A SVA+RVA+E G + + VGY +R E + + T G+LLR++ +
Sbjct: 532 ITQPRRISAISVAQRVAQELGPNMRKNVGYQVRLESKPPARGGALLFCTVGILLRKLQGN 591
Query: 398 ENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCN 457
+L S +++DE HER +NTD L LLK + K PDLRL++ SAT D +RFS YF C
Sbjct: 592 PSLEGVSHVVVDEVHERDVNTDFLLILLKGIQKLNPDLRLVLMSATGDNQRFSHYFGGCP 651
Query: 458 IFSIPGRTFPVDINYSRQEV 477
+ +PG +PV Y +E+
Sbjct: 652 VVKVPGFMYPVK-EYYLEEI 670
Score = 39 (18.8 bits), Expect = 8.8e-32, Sum P(2) = 8.8e-32
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 466 FPVDINYSRQEVTD 479
+PVDI SR + D
Sbjct: 412 YPVDIRESRPRIAD 425
>RGD|1308888 [details] [associations]
symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box polypeptide 30"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA;ISO;ISS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA;ISO;ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308888 GO:GO:0005524 GO:GO:0003682 GO:GO:0003723 GO:GO:0042645
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:22907
HOGENOM:HOG000112212 HOVERGEN:HBG081437 KO:K13185 OrthoDB:EOG4VHK5M
EMBL:BC091359 IPI:IPI00949701 RefSeq:NP_001013267.1
UniGene:Rn.163034 ProteinModelPortal:Q5BJS0 SMR:Q5BJS0
PhosphoSite:Q5BJS0 PRIDE:Q5BJS0 Ensembl:ENSRNOT00000064600
GeneID:367172 KEGG:rno:367172 UCSC:RGD:1308888 NextBio:690809
ArrayExpress:Q5BJS0 Genevestigator:Q5BJS0
GermOnline:ENSRNOG00000029194 Uniprot:Q5BJS0
Length = 1194
Score = 402 (146.6 bits), Expect = 8.4e-65, Sum P(3) = 8.4e-65
Identities = 105/304 (34%), Positives = 162/304 (53%)
Query: 481 LDSALITVLQIHVD---EPEGDILLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPVY 537
LD L+T L +H+D EP G IL FL G +EI + L E ALG + ++LPV+
Sbjct: 650 LDLDLVTDLVLHIDARGEP-GGILCFLPGWQEIKGVQQRLQE---ALGMHESKYLILPVH 705
Query: 538 SALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDS 597
S +P Q IF+ P G RK+V+ATNIAE S+T++ I +V+D G K+ Y+ K ++
Sbjct: 706 SNIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSC 765
Query: 598 LVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMK 657
L +S+A+ +QR GRAGR G Y L+ S +M P +PEI R L + L K
Sbjct: 766 LETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLE-KMVPFQVPEILRTPLENLVLQAK 824
Query: 658 A-MGINNLLSF--DFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLS 714
M + F VD P+ +A+ A+ L +G LD+ LT LG+++A DP L+
Sbjct: 825 IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLA 884
Query: 715 KMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQPEG-DHLTLLAVY 773
K ++ + C +L +++ + T F+ + +A+ D+ +A G DHL +
Sbjct: 885 KAIVLAAIFRCLHPLLVVVSCL-TRDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAV 943
Query: 774 EAWK 777
W+
Sbjct: 944 AGWE 947
Score = 348 (127.6 bits), Expect = 8.4e-65, Sum P(3) = 8.4e-65
Identities = 99/290 (34%), Positives = 152/290 (52%)
Query: 193 PEGSLSRTAALQSALTKERREVREQQLRTMIDSI-P--KDLNRPWEDPMPETGERHLA-Q 248
PE L + A S + + +LR D I P KD + P DP+ TG+ ++
Sbjct: 351 PEPILRKIEAFLSHYPVDSSWI-SPELRLQSDDILPLGKD-SGPLSDPI--TGKPYMPLS 406
Query: 249 ELRGVGLSARDMPEWKKNAYGKAFTFGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVL 308
E V LS + W++ I ++ LP+ ++ ++ A+ + V+
Sbjct: 407 EAEEVRLSQSLLELWRRRG-------------PIWQEAPQLPVDPHRDTILSAIEQHPVV 453
Query: 309 ILIGETGSGKTTQLAQYLAEAGYTTKGK-IGC----TQPRRVAATSVAKRVAEEFGCRLG 363
++ G+TG GKTT++ Q L E Y T+G+ C TQPRR++A SVA+RV+ E G L
Sbjct: 454 VISGDTGCGKTTRIPQLLLER-YVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLR 512
Query: 364 EEVGYAIRFEDCT-GPDTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLF 422
VG+ +R E + + T G+LLR++ + +L S +++DE HER +NTD L
Sbjct: 513 RNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLL 572
Query: 423 GLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPVDINY 472
LLK L + P LRL++ SAT D ERFS YF C + +PG +PV +Y
Sbjct: 573 ILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHY 622
Score = 44 (20.5 bits), Expect = 8.4e-65, Sum P(3) = 8.4e-65
Identities = 12/30 (40%), Positives = 14/30 (46%)
Query: 102 FENDR-ERSGRYCKSNPPMLKDMPVSRMGG 130
F DR + R CK PP L M V+ G
Sbjct: 7 FRKDRTQHRQRQCKLPPPRLPPMCVNPAPG 36
>UNIPROTKB|Q5BJS0 [details] [associations]
symbol:Dhx30 "Putative ATP-dependent RNA helicase DHX30"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1308888 GO:GO:0005524 GO:GO:0003682
GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:BC091359 IPI:IPI00949701
RefSeq:NP_001013267.1 UniGene:Rn.163034 ProteinModelPortal:Q5BJS0
SMR:Q5BJS0 PhosphoSite:Q5BJS0 PRIDE:Q5BJS0
Ensembl:ENSRNOT00000064600 GeneID:367172 KEGG:rno:367172
UCSC:RGD:1308888 NextBio:690809 ArrayExpress:Q5BJS0
Genevestigator:Q5BJS0 GermOnline:ENSRNOG00000029194 Uniprot:Q5BJS0
Length = 1194
Score = 402 (146.6 bits), Expect = 8.4e-65, Sum P(3) = 8.4e-65
Identities = 105/304 (34%), Positives = 162/304 (53%)
Query: 481 LDSALITVLQIHVD---EPEGDILLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPVY 537
LD L+T L +H+D EP G IL FL G +EI + L E ALG + ++LPV+
Sbjct: 650 LDLDLVTDLVLHIDARGEP-GGILCFLPGWQEIKGVQQRLQE---ALGMHESKYLILPVH 705
Query: 538 SALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDS 597
S +P Q IF+ P G RK+V+ATNIAE S+T++ I +V+D G K+ Y+ K ++
Sbjct: 706 SNIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSC 765
Query: 598 LVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMK 657
L +S+A+ +QR GRAGR G Y L+ S +M P +PEI R L + L K
Sbjct: 766 LETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLE-KMVPFQVPEILRTPLENLVLQAK 824
Query: 658 A-MGINNLLSF--DFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLS 714
M + F VD P+ +A+ A+ L +G LD+ LT LG+++A DP L+
Sbjct: 825 IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLA 884
Query: 715 KMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQPEG-DHLTLLAVY 773
K ++ + C +L +++ + T F+ + +A+ D+ +A G DHL +
Sbjct: 885 KAIVLAAIFRCLHPLLVVVSCL-TRDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAV 943
Query: 774 EAWK 777
W+
Sbjct: 944 AGWE 947
Score = 348 (127.6 bits), Expect = 8.4e-65, Sum P(3) = 8.4e-65
Identities = 99/290 (34%), Positives = 152/290 (52%)
Query: 193 PEGSLSRTAALQSALTKERREVREQQLRTMIDSI-P--KDLNRPWEDPMPETGERHLA-Q 248
PE L + A S + + +LR D I P KD + P DP+ TG+ ++
Sbjct: 351 PEPILRKIEAFLSHYPVDSSWI-SPELRLQSDDILPLGKD-SGPLSDPI--TGKPYMPLS 406
Query: 249 ELRGVGLSARDMPEWKKNAYGKAFTFGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVL 308
E V LS + W++ I ++ LP+ ++ ++ A+ + V+
Sbjct: 407 EAEEVRLSQSLLELWRRRG-------------PIWQEAPQLPVDPHRDTILSAIEQHPVV 453
Query: 309 ILIGETGSGKTTQLAQYLAEAGYTTKGK-IGC----TQPRRVAATSVAKRVAEEFGCRLG 363
++ G+TG GKTT++ Q L E Y T+G+ C TQPRR++A SVA+RV+ E G L
Sbjct: 454 VISGDTGCGKTTRIPQLLLER-YVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLR 512
Query: 364 EEVGYAIRFEDCT-GPDTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLF 422
VG+ +R E + + T G+LLR++ + +L S +++DE HER +NTD L
Sbjct: 513 RNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLL 572
Query: 423 GLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPVDINY 472
LLK L + P LRL++ SAT D ERFS YF C + +PG +PV +Y
Sbjct: 573 ILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEHY 622
Score = 44 (20.5 bits), Expect = 8.4e-65, Sum P(3) = 8.4e-65
Identities = 12/30 (40%), Positives = 14/30 (46%)
Query: 102 FENDR-ERSGRYCKSNPPMLKDMPVSRMGG 130
F DR + R CK PP L M V+ G
Sbjct: 7 FRKDRTQHRQRQCKLPPPRLPPMCVNPAPG 36
>TIGR_CMR|GSU_1838 [details] [associations]
symbol:GSU_1838 "ATP-dependent helicase HrpB"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004386 "helicase
activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
KO:K03579 OMA:GILTRMI InterPro:IPR010225 InterPro:IPR013689
Pfam:PF08482 PIRSF:PIRSF005496 TIGRFAMs:TIGR01970
HOGENOM:HOG000244610 RefSeq:NP_952888.1 ProteinModelPortal:Q74C37
DNASU:2688652 GeneID:2688652 KEGG:gsu:GSU1838 PATRIC:22026533
ProtClustDB:CLSK828597 BioCyc:GSUL243231:GH27-1781-MONOMER
Uniprot:Q74C37
Length = 846
Score = 660 (237.4 bits), Expect = 8.5e-65, P = 8.5e-65
Identities = 163/449 (36%), Positives = 248/449 (55%)
Query: 289 LPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCTQPRRVAAT 348
LP+ + +L+ A+ +L G+GKTT++ L +A + +I +PRR+AAT
Sbjct: 4 LPVDDVIPDLLTALEQRNAAVLQAPPGAGKTTRVPLALLDAPWLNGKRIIMLEPRRLAAT 63
Query: 349 SVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIML 408
+ A+ +A G G VGYAIRF+ T ++ +T+G+L R + D L ++
Sbjct: 64 NAARWMARSLGEEAGATVGYAIRFDRRVSARTRVEVVTEGILTRRLQSDPLLEGVGAVIF 123
Query: 409 DEAHERTINTDVLFGLLKQL-VKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFP 467
DE HER+I++D+ L + + R DLR+IV SAT+ A + + + + GR +P
Sbjct: 124 DEFHERSIHSDLALALCRDVQAGLREDLRIIVMSATMAAAPVAALLGDAPVITSEGRNYP 183
Query: 468 VDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEKIKALGKD 527
V + + + L SA+ ++I V E EGDIL FL G EI C ++ A
Sbjct: 184 VALRHIPPNDRENLPSAVARAVRIAVRECEGDILAFLPGVGEI-----RRCGQLLADDPP 238
Query: 528 VPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQN 587
+ +V+P+Y LP Q R P P G RKVV+AT IAE SLTI+G+ V+D G ++
Sbjct: 239 LHAPLVVPLYGDLPFVEQERAILPVP-GRRKVVLATTIAETSLTIEGVRVVVDGGQTRRL 297
Query: 588 VYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRI 647
Y+P L+ LV +S ASA QRAGRAGR GPG CYRL+ E ++ ++ PEI
Sbjct: 298 RYDPASGLNRLVTERVSAASATQRAGRAGRLGPGTCYRLWPEHDQQALLAADP-PEILIA 356
Query: 648 NLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEF 707
+L L + G+++ S ++DPP AL A L SL ALD +G++T+ G++MAE
Sbjct: 357 DLAPLALDLAHWGVSDPASLAWLDPPPRGALEEARNLLKSLDALDGQGMITETGRRMAEL 416
Query: 708 PLDPPLSKMLLASVDLGCSDEILTIIAMI 736
PL P L+ MLL + + G + + A++
Sbjct: 417 PLHPRLAHMLLRATERGPAPLACDVAALL 445
>UNIPROTKB|J9P264 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AAEX03012236 Ensembl:ENSCAFT00000047330
Uniprot:J9P264
Length = 1219
Score = 405 (147.6 bits), Expect = 9.3e-65, Sum P(2) = 9.3e-65
Identities = 107/313 (34%), Positives = 165/313 (52%)
Query: 472 YSRQEVTDYLDSALITVLQIHVD---EPEGDILLFLTGQEEIDFACESLCEKIKALGKDV 528
+ R E LD L+T L +H+D EP G IL FL G +EI + L E ALG
Sbjct: 672 WPRSEDECALDLDLVTDLVLHIDARGEP-GGILCFLPGWQEIKGVQQRLQE---ALGMHE 727
Query: 529 PELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNV 588
+ ++LPV+S +P Q IF+ P G RK+V+ATNIAE S+T++ I +V+D G K+
Sbjct: 728 SKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITVNDIVHVVDSGLHKEER 787
Query: 589 YNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRIN 648
Y+ K ++ L +S+A+ +QR GRAGR G Y L+ S +M P +PEI R
Sbjct: 788 YDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLE-KMVPFQVPEILRTP 846
Query: 649 LVHTTLTMKA-MGINNLLSF--DFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMA 705
L + L K M + F VD P+ +A+ A+ L +G LD+ LT LG+++A
Sbjct: 847 LENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLA 906
Query: 706 EFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQPEG- 764
DP L+K ++ + C +L +++ + T F+ + +A+ D+ +A G
Sbjct: 907 HISTDPRLAKAIVLAAIFRCLHPLLVVVSCL-TRDPFSSSLQNRAEVDKVKALLSHDSGS 965
Query: 765 DHLTLLAVYEAWK 777
DHL + W+
Sbjct: 966 DHLAFVRAVAGWE 978
Score = 342 (125.4 bits), Expect = 9.3e-65, Sum P(2) = 9.3e-65
Identities = 92/265 (34%), Positives = 144/265 (54%)
Query: 218 QLRTMIDSI-P--KDLNRPWEDPMPETGERHLA-QELRGVGLSARDMPEWKKNAYGKAFT 273
+LR D I P KD + P DP+ TG+ ++ E V LS + W++
Sbjct: 403 ELRLQSDDILPLGKD-SGPLSDPI--TGKPYVPLSEAEEVRLSQNLLELWRRRG------ 453
Query: 274 FGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTT 333
+ ++ LP+ ++ ++ A+ + V+++ G+TG GKTT++ Q L E Y +
Sbjct: 454 -------PVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLER-YVS 505
Query: 334 KGK-IGC----TQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCT-GPDTVIKYMTD 387
+G+ C TQPRR++A SVA+RV+ E G L VG+ +R E + + T
Sbjct: 506 EGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTV 565
Query: 388 GMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAE 447
G+LLR++ + +L S +++DE HER +NTD L LLK L + P LRL++ SAT D E
Sbjct: 566 GILLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNE 625
Query: 448 RFSGYFFNCNIFSIPGRTFPVDINY 472
RFS YF C + +PG +PV +Y
Sbjct: 626 RFSRYFGGCPVIKVPGFMYPVKEHY 650
>POMBASE|SPBC15C4.05 [details] [associations]
symbol:SPBC15C4.05 "ATP-dependent RNA/DNA helicase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
PomBase:SPBC15C4.05 GO:GO:0005829 GO:GO:0005524 EMBL:CU329671
GO:GO:0003676 GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 PIR:T39475 RefSeq:NP_595925.1
ProteinModelPortal:O60114 EnsemblFungi:SPBC15C4.05.1 GeneID:2539831
KEGG:spo:SPBC15C4.05 OrthoDB:EOG4TXG12 NextBio:20800979
Uniprot:O60114
Length = 1428
Score = 391 (142.7 bits), Expect = 9.9e-65, Sum P(3) = 9.9e-65
Identities = 97/283 (34%), Positives = 156/283 (55%)
Query: 500 ILLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKV 559
+L+FL G EI +SL E + ++ + + ++S L S Q +F P G RK+
Sbjct: 906 VLVFLPGISEI-LRVKSLIEDMPMF-RNHRKFCIYMLHSTLSSAQQQSVFNIPPKGCRKI 963
Query: 560 VVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTG 619
V++TNIAE +TI + VID G ++ YN ++ L L T +S+A+A QR+GRAGR
Sbjct: 964 VLSTNIAETGVTIPDVTCVIDTGVHREMRYNSRRHLSRLTDTFVSKANAKQRSGRAGRVQ 1023
Query: 620 PGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKA--MG-INNLLSFDFVDPPSPQ 676
G CY L+++ + ++ PEI R+NL L +K MG + ++L +DPPS
Sbjct: 1024 EGICYHLFSKFKHDTQFLSYQTPEILRLNLQEVVLRVKMCQMGDVQDVLG-KALDPPSST 1082
Query: 677 ALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMI 736
+I A+E+L+ +GAL E LTKLGK +++ P+D L K+L+ C D +I+AM+
Sbjct: 1083 NIIRALEKLHQVGALSENEKLTKLGKFLSQLPVDANLGKILVLGCFYKCVDAASSIVAML 1142
Query: 737 QTGHIFTRPRERQAKADEKRARFFQPE--GDHLTLLAVYEAWK 777
G F + + + A++ R F + D + + Y AW+
Sbjct: 1143 TIGSPFRKSVDNEFSANKARLSFAKENTRSDLVLMYYAYCAWR 1185
Score = 370 (135.3 bits), Expect = 9.9e-65, Sum P(3) = 9.9e-65
Identities = 103/302 (34%), Positives = 166/302 (54%)
Query: 178 TRVSVDLSPVKVFKNPEGSLSRTAALQSALTKERREVREQQLRTMIDSIPKDLNRPWEDP 237
T++S+ P K FK G S A Q+ E ++ E+ +DSI K ++ E P
Sbjct: 531 TKISLQTFP-KSFKEVYGKFS--AEKQNTDLAEDAKISEK-----LDSIIK--SKELETP 580
Query: 238 MPETGERHLAQELRGVG-LSARDMP-EWKKNAYGKAFTFGQRSKLSIQEQRRSLPIFKLK 295
T + +A + +G S + P E N + + K + R LP +
Sbjct: 581 TSATTSKLMAP-MDNIGKFSGFERPPETLLNKWRQQLESESAEKFKVF--RNQLPATMFR 637
Query: 296 NELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGK---IGCTQPRRVAATSVAK 352
+I AV+++Q+LI+ G+TG GK+TQ+ +L E T GK I T+PRR++A S+A
Sbjct: 638 ETIIDAVNNSQLLIISGDTGCGKSTQIPAFLLENS-TKNGKAVKIYVTEPRRISAISLAN 696
Query: 353 RVAEEFG-----CRLGEEVGYAIRFED-CTGPDTVIKYMTDGMLLREILIDENLSQYSVI 406
RV++E G R E VGY++R + CT P T + Y+T G LR + + + + +
Sbjct: 697 RVSQELGGNPPSARSHELVGYSVRLDSKCT-PLTPLTYVTTGTFLRLLEVGNEIESVTHL 755
Query: 407 MLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTF 466
++DE HER+I++D+L + L+K+ P L++I+ SATL+AE+F YF N+ +IPG+T+
Sbjct: 756 IIDEVHERSIDSDLLLIHVLHLLKQHPHLKIIIMSATLNAEKFQLYFEGSNLITIPGKTY 815
Query: 467 PV 468
PV
Sbjct: 816 PV 817
Score = 38 (18.4 bits), Expect = 4.1e-30, Sum P(3) = 4.1e-30
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 434 DLRLIVTSATLDAERFSGY-FFN--CNIFSIPGRTFP 467
DL+ ++ +ATL A+ S F N I +TFP
Sbjct: 503 DLKTVLPTATLAADYISMIVLFRLMANFTKISLQTFP 539
Score = 37 (18.1 bits), Expect = 9.9e-65, Sum P(3) = 9.9e-65
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 40 ESGRNSETVEIFDDKLKEYGADLPNYLVRTLFN 72
+ NSE+ ++ E AD YL+ LFN
Sbjct: 393 DDDNNSESNDMSPHNDAETRADDDAYLMGDLFN 425
>UNIPROTKB|Q7L2E3 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0042645 "mitochondrial nucleoid" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003682
GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:AB020697 EMBL:AK002076
EMBL:AK291266 EMBL:BC014237 EMBL:BC015029 EMBL:BC020126
EMBL:BC038417 IPI:IPI00411733 IPI:IPI00926109 IPI:IPI00927809
PIR:E56236 RefSeq:NP_055781.2 RefSeq:NP_619520.1 UniGene:Hs.517948
PDB:2DB2 PDBsum:2DB2 ProteinModelPortal:Q7L2E3 SMR:Q7L2E3
IntAct:Q7L2E3 MINT:MINT-1186537 STRING:Q7L2E3 PhosphoSite:Q7L2E3
DMDM:74758997 PaxDb:Q7L2E3 PRIDE:Q7L2E3 DNASU:22907
Ensembl:ENST00000445061 Ensembl:ENST00000446256
Ensembl:ENST00000457607 GeneID:22907 KEGG:hsa:22907 UCSC:uc003crt.3
UCSC:uc003cru.3 GeneCards:GC03P047844 HGNC:HGNC:16716 HPA:HPA034806
neXtProt:NX_Q7L2E3 PharmGKB:PA27217 InParanoid:Q7L2E3 OMA:LHKEERY
PhylomeDB:Q7L2E3 EvolutionaryTrace:Q7L2E3 GenomeRNAi:22907
NextBio:43571 ArrayExpress:Q7L2E3 Bgee:Q7L2E3 CleanEx:HS_DHX30
Genevestigator:Q7L2E3 Uniprot:Q7L2E3
Length = 1194
Score = 404 (147.3 bits), Expect = 1.0e-64, Sum P(3) = 1.0e-64
Identities = 106/304 (34%), Positives = 162/304 (53%)
Query: 481 LDSALITVLQIHVD---EPEGDILLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPVY 537
LD L+T L +H+D EP G IL FL G +EI + L E ALG + ++LPV+
Sbjct: 650 LDLDLVTDLVLHIDARGEP-GGILCFLPGWQEIKGVQQRLQE---ALGMHESKYLILPVH 705
Query: 538 SALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDS 597
S +P Q IF+ P G RK+V+ATNIAE S+TI+ I +V+D G K+ Y+ K ++
Sbjct: 706 SNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSC 765
Query: 598 LVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMK 657
L +S+A+ +QR GRAGR G Y L+ S +M P +PEI R L + L K
Sbjct: 766 LETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLE-KMVPFQVPEILRTPLENLVLQAK 824
Query: 658 A-MGINNLLSF--DFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLS 714
M + F VD P+ +A+ A+ L +G LD+ LT LG+++A DP L+
Sbjct: 825 IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLA 884
Query: 715 KMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQPEG-DHLTLLAVY 773
K ++ + C +L +++ + T F+ + +A+ D+ +A G DHL +
Sbjct: 885 KAIVLAAIFRCLHPLLVVVSCL-TRDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAV 943
Query: 774 EAWK 777
W+
Sbjct: 944 AGWE 947
Score = 345 (126.5 bits), Expect = 1.0e-64, Sum P(3) = 1.0e-64
Identities = 78/203 (38%), Positives = 121/203 (59%)
Query: 277 RSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGK 336
R + + ++ LP+ ++ ++ A+ + V+++ G+TG GKTT++ Q L E Y T+G+
Sbjct: 422 RRRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLER-YVTEGR 480
Query: 337 -IGC----TQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDT--VIKYMTDGM 389
C TQPRR++A SVA+RV+ E G L VG+ +R E P + + T G+
Sbjct: 481 GARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLES-KPPSRGGALLFCTVGI 539
Query: 390 LLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERF 449
LLR++ + +L S +++DE HER +NTD L LLK L + P LRL++ SAT D ERF
Sbjct: 540 LLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERF 599
Query: 450 SGYFFNCNIFSIPGRTFPVDINY 472
S YF C + +PG +PV +Y
Sbjct: 600 SRYFGGCPVIKVPGFMYPVKEHY 622
Score = 44 (20.5 bits), Expect = 1.0e-64, Sum P(3) = 1.0e-64
Identities = 12/30 (40%), Positives = 14/30 (46%)
Query: 102 FENDR-ERSGRYCKSNPPMLKDMPVSRMGG 130
F DR + R CK PP L M V+ G
Sbjct: 7 FRKDRAQHRQRQCKLPPPRLPPMCVNPTPG 36
>UNIPROTKB|F1NS70 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 OMA:RAFWESS EMBL:AADN02056192 EMBL:AADN02056193
IPI:IPI00591470 Ensembl:ENSGALT00000000247 Uniprot:F1NS70
Length = 1339
Score = 383 (139.9 bits), Expect = 1.1e-64, Sum P(2) = 1.1e-64
Identities = 79/196 (40%), Positives = 127/196 (64%)
Query: 276 QRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTT-- 333
+R + R+SLP+F+ K E+++ + +N+V++++GETGSGKTTQ+ Q+L + Y
Sbjct: 90 KRGESEYDSFRQSLPVFEKKEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCYENGV 149
Query: 334 KGKIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLRE 393
+I CTQPRR+A +VA+RVA E ++G+ VGY IR E P T++ + T+G+LLR
Sbjct: 150 PCRIFCTQPRRLAVIAVAERVAAERREKVGQTVGYQIRLESRVSPRTLLTFCTNGILLRT 209
Query: 394 ILI-DENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGY 452
++ D LS + +++DE HER +D L L+ +++ + +L+LI++SA LDA F Y
Sbjct: 210 LMAGDSALSTVTHVIVDEVHERDRFSDFLLIKLRDILQNQTNLKLIISSAALDANLFIKY 269
Query: 453 FFNCNIFSIPGRTFPV 468
F +C + I GR F V
Sbjct: 270 FGSCPVIHIQGRPFEV 285
Score = 366 (133.9 bits), Expect = 1.1e-64, Sum P(2) = 1.1e-64
Identities = 103/314 (32%), Positives = 169/314 (53%)
Query: 498 GDILLFLTGQEEIDFACESLCEKIKALGKDV-PELVVLPVYSALPSEIQSRIFEPAPPGG 556
G IL+FL G +EI + + K + + V ++S + + Q + + P G
Sbjct: 533 GAILIFLPGYDEIISLRDRIIFDDKRFVDNAHSKYQVFMLHSNMQTLDQKNVLKTPPSGI 592
Query: 557 RKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAG 616
RK++++TNIAE S+T++ + +VID G K+ ++ + L IS+ASA+QR GRAG
Sbjct: 593 RKIILSTNIAETSITVNDVVFVIDSGKMKEKSFDALSCVTMLKTVWISKASAIQRRGRAG 652
Query: 617 RTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFV--DPPS 674
R PG C+ L++ +++ + T PE++R+ L L K + N DF+ P
Sbjct: 653 RCRPGVCFHLFSRLRFQNMLEFQT-PELRRMPLQELCLHTKLLAPVNCPVVDFLMKAPDP 711
Query: 675 PQALI--SAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTI 732
P ALI +A++ L + A+D LT+LG +AE P++P L KM+L +V L C D ILTI
Sbjct: 712 PPALIVRNAIQMLKKIDAMDVWEDLTELGYHLAELPVEPHLGKMVLCAVVLKCLDPILTI 771
Query: 733 IAMIQTGHIFTRP----RERQAKADEKR--ARFFQPEGDHLTLLAVYEAW-KAKN--FSL 783
+ F P ++R A KR A F DH+ LL ++AW KA++ +
Sbjct: 772 ACTLAYRDPFVLPTVASQKRAAMLCRKRLAAGTFS---DHMVLLRAFQAWQKARSDGWER 828
Query: 784 PWCGENFVNSRSLK 797
+C +NF++ +++
Sbjct: 829 VFCEKNFLSQATME 842
Score = 39 (18.8 bits), Expect = 1.9e-28, Sum P(2) = 1.9e-28
Identities = 9/14 (64%), Positives = 10/14 (71%)
Query: 482 DSALITVLQIHVDE 495
DSAL TV + VDE
Sbjct: 214 DSALSTVTHVIVDE 227
Score = 38 (18.4 bits), Expect = 3.2e-30, Sum P(2) = 3.2e-30
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 674 SPQALISAMEQLYSLGA 690
S + +S +EQL S+GA
Sbjct: 425 SGRGFLSQVEQLISMGA 441
Score = 38 (18.4 bits), Expect = 2.4e-28, Sum P(2) = 2.4e-28
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 240 ETGERHLAQELRGVGLSARDMPEWKK 265
E E L LR G + ++M ++KK
Sbjct: 284 EVKEMFLEDILRSTGYTNKEMIKYKK 309
>UNIPROTKB|E2RL62 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:LHKEERY EMBL:AAEX03012236
Ensembl:ENSCAFT00000020710 NextBio:20852259 Uniprot:E2RL62
Length = 1222
Score = 403 (146.9 bits), Expect = 1.6e-64, Sum P(2) = 1.6e-64
Identities = 105/304 (34%), Positives = 162/304 (53%)
Query: 481 LDSALITVLQIHVD---EPEGDILLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPVY 537
LD L+T L +H+D EP G IL FL G +EI + L E ALG + ++LPV+
Sbjct: 678 LDLDLVTDLVLHIDARGEP-GGILCFLPGWQEIKGVQQRLQE---ALGMHESKYLILPVH 733
Query: 538 SALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDS 597
S +P Q IF+ P G RK+V+ATNIAE S+T++ I +V+D G K+ Y+ K ++
Sbjct: 734 SNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSC 793
Query: 598 LVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMK 657
L +S+A+ +QR GRAGR G Y L+ S +M P +PEI R L + L K
Sbjct: 794 LETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLE-KMVPFQVPEILRTPLENLVLQAK 852
Query: 658 A-MGINNLLSF--DFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLS 714
M + F VD P+ +A+ A+ L +G LD+ LT LG+++A DP L+
Sbjct: 853 IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLA 912
Query: 715 KMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQPEG-DHLTLLAVY 773
K ++ + C +L +++ + T F+ + +A+ D+ +A G DHL +
Sbjct: 913 KAIVLAAIFRCLHPLLVVVSCL-TRDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAV 971
Query: 774 EAWK 777
W+
Sbjct: 972 AGWE 975
Score = 342 (125.4 bits), Expect = 1.6e-64, Sum P(2) = 1.6e-64
Identities = 92/265 (34%), Positives = 144/265 (54%)
Query: 218 QLRTMIDSI-P--KDLNRPWEDPMPETGERHLA-QELRGVGLSARDMPEWKKNAYGKAFT 273
+LR D I P KD + P DP+ TG+ ++ E V LS + W++
Sbjct: 403 ELRLQSDDILPLGKD-SGPLSDPI--TGKPYVPLSEAEEVRLSQNLLELWRRRG------ 453
Query: 274 FGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTT 333
+ ++ LP+ ++ ++ A+ + V+++ G+TG GKTT++ Q L E Y +
Sbjct: 454 -------PVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLER-YVS 505
Query: 334 KGK-IGC----TQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCT-GPDTVIKYMTD 387
+G+ C TQPRR++A SVA+RV+ E G L VG+ +R E + + T
Sbjct: 506 EGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTV 565
Query: 388 GMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAE 447
G+LLR++ + +L S +++DE HER +NTD L LLK L + P LRL++ SAT D E
Sbjct: 566 GILLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNE 625
Query: 448 RFSGYFFNCNIFSIPGRTFPVDINY 472
RFS YF C + +PG +PV +Y
Sbjct: 626 RFSRYFGGCPVIKVPGFMYPVKEHY 650
>UNIPROTKB|J9P3P6 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AAEX03012236 Ensembl:ENSCAFT00000047198
Uniprot:J9P3P6
Length = 1135
Score = 403 (146.9 bits), Expect = 2.0e-64, Sum P(3) = 2.0e-64
Identities = 105/304 (34%), Positives = 162/304 (53%)
Query: 481 LDSALITVLQIHVD---EPEGDILLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPVY 537
LD L+T L +H+D EP G IL FL G +EI + L E ALG + ++LPV+
Sbjct: 650 LDLDLVTDLVLHIDARGEP-GGILCFLPGWQEIKGVQQRLQE---ALGMHESKYLILPVH 705
Query: 538 SALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDS 597
S +P Q IF+ P G RK+V+ATNIAE S+T++ I +V+D G K+ Y+ K ++
Sbjct: 706 SNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSC 765
Query: 598 LVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMK 657
L +S+A+ +QR GRAGR G Y L+ S +M P +PEI R L + L K
Sbjct: 766 LETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLE-KMVPFQVPEILRTPLENLVLQAK 824
Query: 658 A-MGINNLLSF--DFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLS 714
M + F VD P+ +A+ A+ L +G LD+ LT LG+++A DP L+
Sbjct: 825 IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLA 884
Query: 715 KMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQPEG-DHLTLLAVY 773
K ++ + C +L +++ + T F+ + +A+ D+ +A G DHL +
Sbjct: 885 KAIVLAAIFRCLHPLLVVVSCL-TRDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAV 943
Query: 774 EAWK 777
W+
Sbjct: 944 AGWE 947
Score = 342 (125.4 bits), Expect = 2.0e-64, Sum P(3) = 2.0e-64
Identities = 92/265 (34%), Positives = 144/265 (54%)
Query: 218 QLRTMIDSI-P--KDLNRPWEDPMPETGERHLA-QELRGVGLSARDMPEWKKNAYGKAFT 273
+LR D I P KD + P DP+ TG+ ++ E V LS + W++
Sbjct: 375 ELRLQSDDILPLGKD-SGPLSDPI--TGKPYVPLSEAEEVRLSQNLLELWRRRG------ 425
Query: 274 FGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTT 333
+ ++ LP+ ++ ++ A+ + V+++ G+TG GKTT++ Q L E Y +
Sbjct: 426 -------PVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLER-YVS 477
Query: 334 KGK-IGC----TQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCT-GPDTVIKYMTD 387
+G+ C TQPRR++A SVA+RV+ E G L VG+ +R E + + T
Sbjct: 478 EGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTV 537
Query: 388 GMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAE 447
G+LLR++ + +L S +++DE HER +NTD L LLK L + P LRL++ SAT D E
Sbjct: 538 GILLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNE 597
Query: 448 RFSGYFFNCNIFSIPGRTFPVDINY 472
RFS YF C + +PG +PV +Y
Sbjct: 598 RFSRYFGGCPVIKVPGFMYPVKEHY 622
Score = 44 (20.5 bits), Expect = 2.0e-64, Sum P(3) = 2.0e-64
Identities = 12/30 (40%), Positives = 14/30 (46%)
Query: 102 FENDR-ERSGRYCKSNPPMLKDMPVSRMGG 130
F DR + R CK PP L M V+ G
Sbjct: 7 FRKDRAQHRQRQCKLPPPRLPPMCVNPAPG 36
>UNIPROTKB|G4MR96 [details] [associations]
symbol:MGG_04709 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
EMBL:CM001231 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 RefSeq:XP_003710833.1
EnsemblFungi:MGG_04709T0 GeneID:2677908 KEGG:mgr:MGG_04709
Uniprot:G4MR96
Length = 1504
Score = 390 (142.3 bits), Expect = 2.7e-64, Sum P(3) = 2.7e-64
Identities = 87/221 (39%), Positives = 139/221 (62%)
Query: 286 RRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTT-KG-KIGCTQPR 343
R LP++ + +++ AV +QV+I+ GETG GK+TQ+ +L E K KI CT+PR
Sbjct: 688 RMQLPMWAFREQVLSAVDQHQVVIVCGETGCGKSTQVPSFLLEHQLAQGKACKIYCTEPR 747
Query: 344 RVAATSVAKRVAEEFG---CRLGEE---VGYAIRFEDCTGPDTVIKYMTDGMLLREILID 397
R++A S+A+RV+EE G LG VGY+IR E T +T + + T G+++R +
Sbjct: 748 RISAISLARRVSEELGEGRNDLGTSRSLVGYSIRLEANTSRETRLVFATTGIVMRMLEGS 807
Query: 398 ENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCN 457
+L + ++LDE HER+I++D L +LK+L+ RR DL++++ SAT+DA+RFS Y
Sbjct: 808 NDLRDITHLVLDEVHERSIDSDFLLIVLKKLMTRRKDLKVVLMSATVDADRFSNYLDGAP 867
Query: 458 IFSIPGRTFPVDINYSRQ--EVTDY-LDSALITVLQIHVDE 495
+ ++PGRTFPV +N+ E+T Y +D + + +DE
Sbjct: 868 VLNVPGRTFPVQVNFLEDAVELTGYTIDQKVPQERLVEIDE 908
Score = 358 (131.1 bits), Expect = 2.7e-64, Sum P(3) = 2.7e-64
Identities = 98/308 (31%), Positives = 164/308 (53%)
Query: 500 ILLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKV 559
IL+FL G EI +L + + +V P++S + +E Q F P G RK+
Sbjct: 970 ILVFLPGIAEI----RTLNDLLLGDRSFQQNWLVYPLHSTIATEEQEAAFLVPPHGMRKI 1025
Query: 560 VVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTG 619
V+ATNIAE +TI + VID G ++ ++ ++++ L+ T IS+A+A QR GRAGR
Sbjct: 1026 VLATNIAETGITIPDVTCVIDTGKHREMRFDERRQMSRLIDTFISRANAKQRRGRAGRVQ 1085
Query: 620 PGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAM---GINNLLSFDFVDPPSPQ 676
G C+ ++T+ + + M+ PE+ R++L + +K GI LS +DPPS +
Sbjct: 1086 QGLCFHMFTKYRHDAIMADQQTPEMLRLSLQDLAIRVKICKIGGIEETLS-KALDPPSAK 1144
Query: 677 ALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMI 736
+ A++ L + AL + LT LG ++A PLD L K++L C D +T+ A++
Sbjct: 1145 NIRRAIDALIDVRALTQGEDLTPLGNQLARLPLDVFLGKLILLGSIFKCLDMAITVAAIL 1204
Query: 737 QTGHIFTRPRERQAKADEKRARFFQPEGDHLTLLAVYEAWK------AKNFS--LPWCGE 788
+ F P ++++AD R F + + D LT+ Y +WK N S +C +
Sbjct: 1205 SSKSPFVAPFGQRSQADTVRLGFRRGDSDILTVYNAYLSWKRVCLAATGNSSQEFQFCRK 1264
Query: 789 NFVNSRSL 796
NF++ ++L
Sbjct: 1265 NFLSQQTL 1272
Score = 47 (21.6 bits), Expect = 2.7e-64, Sum P(3) = 2.7e-64
Identities = 20/76 (26%), Positives = 32/76 (42%)
Query: 189 VFKNPEGSLSRTAALQSALTKERREVREQQLRTMIDSIPKDLNRPWEDPMPETGERHLAQ 248
V ++ E ++R A +A + E L + DS+P N DP+ TG+
Sbjct: 409 VAQSAEDEIAREAEKMAAEILAENDNEEDALAGLFDSLPT--NEV--DPL--TGKSSTVM 462
Query: 249 E-LRGVGLSARDMPEW 263
GV L+ D +W
Sbjct: 463 TGADGVKLTIHDFGKW 478
Score = 43 (20.2 bits), Expect = 7.1e-28, Sum P(3) = 7.1e-28
Identities = 12/47 (25%), Positives = 22/47 (46%)
Query: 382 IKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQL 428
+ ++ D + L ID+ + Q ++ +DE E + LLK L
Sbjct: 880 VNFLEDAVELTGYTIDQKVPQERLVEIDEDAEVEPESSSKTELLKSL 926
Score = 41 (19.5 bits), Expect = 2.9e-27, Sum P(3) = 2.9e-27
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 316 SGKTT-QLAQYLAEAGYTTKGKIGCTQPRRVAAT 348
SG TT +L + + GK T PR+VA T
Sbjct: 263 SGATTPRLLEPDTKKKRKKDGKSRATSPRKVAVT 296
Score = 37 (18.1 bits), Expect = 2.9e-27, Sum P(3) = 2.9e-27
Identities = 11/34 (32%), Positives = 15/34 (44%)
Query: 463 GRTFPVDINYSRQEVTDYLDSALITVLQIHVDEP 496
GR V I+Y+ T + L+ VL EP
Sbjct: 493 GRDPGVKISYTAIPATAFAHQHLVHVLWSKAQEP 526
>UNIPROTKB|Q5R607 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9601 "Pongo abelii" [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0042645 "mitochondrial nucleoid" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003723
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:22907
HOVERGEN:HBG081437 KO:K13185 EMBL:CR858337 EMBL:CR860693
RefSeq:NP_001125306.1 UniGene:Pab.19257 ProteinModelPortal:Q5R607
SMR:Q5R607 PRIDE:Q5R607 GeneID:100172205 KEGG:pon:100172205
InParanoid:Q5R607 Uniprot:Q5R607
Length = 1194
Score = 397 (144.8 bits), Expect = 8.1e-64, Sum P(3) = 8.1e-64
Identities = 105/304 (34%), Positives = 161/304 (52%)
Query: 481 LDSALITVLQIHVD---EPEGDILLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPVY 537
LD L+T L +H+D EP G IL FL G +EI + L E ALG + ++LPV+
Sbjct: 650 LDLDLVTDLVLHIDARGEP-GGILCFLPGWQEIKGVQQRLQE---ALGMHESKYLILPVH 705
Query: 538 SALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDS 597
S +P Q IF+ P G RK+V+ATNIAE S TI+ I +V+D G K+ Y+ K ++
Sbjct: 706 SNIPMMDQKAIFQQPPVGVRKIVLATNIAETSTTINDIVHVVDSGLHKEERYDLKTKVSC 765
Query: 598 LVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMK 657
L +S+A+ +QR GRAGR G Y L+ S +M P +PEI R L + L K
Sbjct: 766 LETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLE-KMVPFQVPEILRTPLENLVLQAK 824
Query: 658 A-MGINNLLSF--DFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLS 714
M + F VD P+ +A+ A+ L +G LD+ LT LG+++A +P L+
Sbjct: 825 IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTEPRLA 884
Query: 715 KMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQPEG-DHLTLLAVY 773
K ++ + C +L +++ + T F+ + +A+ D+ +A G DHL +
Sbjct: 885 KAIVLAAIFRCLHPLLVVVSCL-TRDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAV 943
Query: 774 EAWK 777
W+
Sbjct: 944 AGWE 947
Score = 344 (126.2 bits), Expect = 8.1e-64, Sum P(3) = 8.1e-64
Identities = 77/202 (38%), Positives = 120/202 (59%)
Query: 277 RSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGK 336
R + + ++ LP+ ++ ++ A+ + V+++ G+TG GKTT++ Q L E Y T+G+
Sbjct: 422 RRRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLER-YVTEGR 480
Query: 337 -IGC----TQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCT-GPDTVIKYMTDGML 390
C TQPRR++A SVA+RV+ E G L VG+ +R E + + T G+L
Sbjct: 481 GARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGIL 540
Query: 391 LREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFS 450
LR++ + +L S +++DE HER +NTD L LLK L + P LRL++ SAT D ERFS
Sbjct: 541 LRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFS 600
Query: 451 GYFFNCNIFSIPGRTFPVDINY 472
YF C + +PG +PV +Y
Sbjct: 601 RYFGGCPVIKVPGFMYPVKEHY 622
Score = 44 (20.5 bits), Expect = 8.1e-64, Sum P(3) = 8.1e-64
Identities = 12/30 (40%), Positives = 14/30 (46%)
Query: 102 FENDR-ERSGRYCKSNPPMLKDMPVSRMGG 130
F DR + R CK PP L M V+ G
Sbjct: 7 FRKDRAQHRQRQCKLPPPRLPPMCVNPAPG 36
>DICTYBASE|DDB_G0275313 [details] [associations]
symbol:dhx9 "ATP-dependent RNA helicase"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 dictyBase:DDB_G0275313 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GenomeReviews:CM000151_GR EMBL:AAFI02000013
GO:GO:0003725 GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 RefSeq:XP_643861.1 ProteinModelPortal:Q869Z1
EnsemblProtists:DDB0233740 GeneID:8619912 KEGG:ddi:DDB_G0275313
InParanoid:Q869Z1 OMA:CEYLLEN Uniprot:Q869Z1
Length = 1472
Score = 637 (229.3 bits), Expect = 2.8e-62, Sum P(2) = 2.8e-62
Identities = 164/479 (34%), Positives = 269/479 (56%)
Query: 282 IQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAE----AGYTTKGKI 337
I ++R LPIFK ++ LI+++ +NQ++I++G+TG GKTTQ+ Q++ E +G+ I
Sbjct: 710 IYQKRTELPIFKQRSHLIESIKNNQIIIIMGDTGCGKTTQIPQFVIEDMIDSGHAPYCNI 769
Query: 338 GCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTV-IKYMTDGMLLREILI 396
TQPRR++ A+R+A E ++G+ VGY IRF++ T + T G+LL+ +
Sbjct: 770 VMTQPRRISVLGAAERMAYERLEKVGDTVGYQIRFDNVQPLGTSKLLVCTPGILLKRMYS 829
Query: 397 DENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNC 456
D L S + +DE HER I+TD L +LK+L+ +LR+I+ SAT+D S YF C
Sbjct: 830 DMKLHNVSHLFIDEVHERDIHTDFLLIILKKLLADNNNLRVILMSATMDNSLVSAYFGTC 889
Query: 457 NIFSIPG------RTFPVDINYS--------RQEVTDYLDSALITVLQIHV-----DEPE 497
+ + F DI+ R E +D +D +I L +H+ E
Sbjct: 890 PVIKLTSYHHIAQEYFLEDISKQLNDPTISYRDEQSDDVDHEMILQLIVHIVTKVSSTSE 949
Query: 498 GDILLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGR 557
IL+FL G E+I E L + L ++ E ++LP++S++ ++Q+++FE PP R
Sbjct: 950 DSILIFLPGWEDISQTRE-LMRRHPML-RNENEFLILPLHSSVSMQLQAKVFEKPPPKIR 1007
Query: 558 KVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASAL-QRAGRAG 616
K+V++TNIAE S+TI+ + YVID K Y+ QR +L T + S+L QR GRAG
Sbjct: 1008 KIVLSTNIAETSITINDVVYVIDSAKVKLK-YHETQRDLTLFQTVWACKSSLKQRRGRAG 1066
Query: 617 RTGP-GKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSF--DFVDPP 673
R G CY + + Y + + + E++R+ L L +K + + +++ F + ++PP
Sbjct: 1067 RVRKDGVCYHMVSRDRYNT-LEEFQLSEMRRMPLHELCLQVKVLVLGDVIGFLSEALEPP 1125
Query: 674 SPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTI 732
+++ +A+ L LGAL+ LT LG +++ P+DP + KM++ C D ILTI
Sbjct: 1126 ETKSIDNAINLLIDLGALNANQELTPLGLQLSFIPVDPRIGKMIILGSYFRCLDPILTI 1184
Score = 41 (19.5 bits), Expect = 2.8e-62, Sum P(2) = 2.8e-62
Identities = 6/28 (21%), Positives = 15/28 (53%)
Query: 749 QAKADEKRARFFQPEGDHLTLLAVYEAW 776
Q + + + + + + DHL+ L ++ W
Sbjct: 1222 QQQPQQPKNLYPELQSDHLSFLNIFNGW 1249
>UNIPROTKB|Q68FK8 [details] [associations]
symbol:dhx9 "ATP-dependent RNA helicase A-like protein"
species:8355 "Xenopus laevis" [GO:0070937 "CRD-mediated mRNA
stability complex" evidence=ISS] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:1660
HOVERGEN:HBG039429 KO:K13184 GO:GO:0070937 EMBL:BC079701
RefSeq:NP_001087383.1 UniGene:Xl.55621 ProteinModelPortal:Q68FK8
SMR:Q68FK8 PRIDE:Q68FK8 GeneID:447207 KEGG:xla:447207
Xenbase:XB-GENE-967780 Uniprot:Q68FK8
Length = 1262
Score = 381 (139.2 bits), Expect = 3.1e-62, Sum P(2) = 3.1e-62
Identities = 81/192 (42%), Positives = 120/192 (62%)
Query: 286 RRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGC----TQ 341
R SLP+ K + E++ AVH++ V+I+ G TG GKTTQ+ QY+ + C TQ
Sbjct: 387 RESLPVKKFEEEIMHAVHNSPVVIIRGATGCGKTTQVPQYILDEYIRNDRAAQCNIVVTQ 446
Query: 342 PRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTG-PDTVIKYMTDGMLLREILIDENL 400
PRR++A SVA+RVA E G +G+ GY++RFE P + + T G+LLR++ + +
Sbjct: 447 PRRISAVSVAERVAFERGEEIGKSCGYSVRFESVLPRPHASMLFCTVGVLLRKL--ESGI 504
Query: 401 SQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFS 460
S +++DE HER INTD L +L+ +++ P++R+I+ SAT+D F YFFNC I
Sbjct: 505 RGISHVIVDEIHERDINTDFLLVVLRDVIQAFPEIRVILMSATIDTSMFCEYFFNCPIIE 564
Query: 461 IPGRTFPVDINY 472
+ GRTFPV Y
Sbjct: 565 VFGRTFPVQEYY 576
Score = 344 (126.2 bits), Expect = 3.1e-62, Sum P(2) = 3.1e-62
Identities = 100/330 (30%), Positives = 161/330 (48%)
Query: 455 NCNIFSIPGRTFPVDINYSRQEVTDY-LDSALITVLQIHVD--EPEGDILLFLTGQEEID 511
NCN+ + G + + S ++++ LI L +++ G +L+FL G I
Sbjct: 609 NCNL--VCGDDYGPETRRSMSQLSEKETPLELIEALLKYIETLNVPGAVLVFLPGWNLI- 665
Query: 512 FACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLT 571
+A + E G +LP++S +P + Q ++F+P P G KV+++TNIAE S+T
Sbjct: 666 YAMQKHLEMNPHFGSH--SYCILPLHSQIPRDEQRKVFDPVPDGIIKVILSTNIAETSIT 723
Query: 572 IDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESA 631
I+ + YVID K ++ + + S+ + QR GRAGR PG C+ L +++
Sbjct: 724 INDVVYVIDSCKQKVKLFTSHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSKAR 783
Query: 632 YRSEMSPTTIPEIQRINLVHTTLTMKAM---GINNLLSFDFVDPPSPQALISAMEQLYSL 688
+ ++ PEI R L L++K + GI + LS ++PP A+I A L L
Sbjct: 784 F-DKLETHLTPEIFRTPLHEVALSIKLLRLGGIGHFLS-KAIEPPPLDAVIEAEHTLREL 841
Query: 689 GALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRER 748
ALD LT LG+ +A+ P++P L KM++ D + TI A F R
Sbjct: 842 DALDSNDELTPLGRILAKLPIEPRLGKMMIIGCIFYVGDALCTISAATCFPEPFISEGRR 901
Query: 749 QAKADEKRA--RFFQPEGDHLTLLAVYEAW 776
A RF DH+ LL+V++AW
Sbjct: 902 LGYVHRNFAGNRF----SDHVALLSVFQAW 927
>ZFIN|ZDB-GENE-070912-171 [details] [associations]
symbol:dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide
9" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 ZFIN:ZDB-GENE-070912-171
GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 HOVERGEN:HBG039429 OrthoDB:EOG4HHP1J
OMA:DDWIRLQ EMBL:BX571812 IPI:IPI00491874 UniGene:Dr.79297
SMR:B0S6Z1 Ensembl:ENSDART00000111661 Ensembl:ENSDART00000134918
Uniprot:B0S6Z1
Length = 1271
Score = 368 (134.6 bits), Expect = 9.8e-62, Sum P(3) = 9.8e-62
Identities = 109/358 (30%), Positives = 175/358 (48%)
Query: 455 NCNIFSIPGRTFPVDINYSRQEVTDYLDS-ALITVLQIHVD--EPEGDILLFLTGQEEID 511
NCN+ I G + + + ++ + S LI L +++ E G +L+FL G I
Sbjct: 613 NCNV--ICGSEYSPETKRAMSQLNEKETSFELIEALLKYIETLEVPGAVLVFLPGWNLIY 670
Query: 512 FACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLT 571
F + L E G + +LP++S +P E Q R+FEP P G KV+++TNIAE S+T
Sbjct: 671 FMQKHL-EMNPHFGGH--QYRILPLHSQIPREEQRRVFEPVPDGVTKVILSTNIAETSIT 727
Query: 572 IDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESA 631
I+ + +V+D K ++ + + S+ + QR GRAGR PG C+ L + +
Sbjct: 728 INDVVFVLDSCKQKVKLFTSHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRAR 787
Query: 632 YRSEMSPTTIPEIQRINLVHTTLTMKAM---GINNLLSFDFVDPPSPQALISAMEQLYSL 688
+ + T PEI R L L++K + GI N LS ++PP A+I A L L
Sbjct: 788 FEKLETHMT-PEIFRTPLHEVALSIKLLRLGGIGNFLS-KAIEPPPLDAVIEAEHTLREL 845
Query: 689 GALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRER 748
ALD LT LG+ +A+ P++P L KM++ +GC + + I F P
Sbjct: 846 DALDSNDELTPLGRILAKLPIEPRLGKMMI----MGCIFNVGDAVCTISAATCFPEPFIN 901
Query: 749 QAKADEKRARFFQPE--GDHLTLLAVYEAWK-----AKNFSLPWCGENFVNSRSLKKT 799
+ K R F DH+ LL+V++AW ++ + +C +N +L+ T
Sbjct: 902 EGKRLGFVHRNFAGSRFSDHVALLSVFQAWDEVRVGGEDAEIRFCEHKRLNMPTLRMT 959
Score = 360 (131.8 bits), Expect = 9.8e-62, Sum P(3) = 9.8e-62
Identities = 76/193 (39%), Positives = 119/193 (61%)
Query: 281 SIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAE----AGYTTKGK 336
+I +R LP+ + +++ +++N V+I+ G TG GKTTQ+ QY+ + G +
Sbjct: 387 TILTERSQLPVKNFQEQIMSTIYNNPVVIIRGATGCGKTTQVPQYILDEFIKGGRASDCN 446
Query: 337 IGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFED-CTGPDTVIKYMTDGMLLREIL 395
I TQPRR++A SVA+RV+ E G +G+ GY++RFE P I + T G+LLR++
Sbjct: 447 IVVTQPRRISAVSVAERVSFERGEDVGKSCGYSVRFESFLPRPHASILFCTVGVLLRKL- 505
Query: 396 IDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFN 455
+ + S +++DE HER INTD L +L+ +V+ PD+R+I+ SAT+D F YFFN
Sbjct: 506 -ESGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPDVRVILMSATIDTTMFKEYFFN 564
Query: 456 CNIFSIPGRTFPV 468
C + + GR PV
Sbjct: 565 CPVIEVHGRAHPV 577
Score = 41 (19.5 bits), Expect = 9.8e-62, Sum P(3) = 9.8e-62
Identities = 14/41 (34%), Positives = 18/41 (43%)
Query: 29 FIDKVLAEFISESGRNSETVEIFDDKLKEYGADLPNYLVRT 69
F+ +V E S G + T + D D NYLVRT
Sbjct: 34 FMCEVRVESYSYIGMGNSTNK--KDAQSNAARDFVNYLVRT 72
>UNIPROTKB|G5E5N3 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9913
"Bos taurus" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=IEA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001085
"RNA polymerase II transcription factor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 Gene3D:3.30.160.20 GO:GO:0030529
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 UniGene:Bt.5544 GO:GO:0070937
OMA:DDWIRLQ GO:GO:0070934 EMBL:DAAA02043563 EMBL:DAAA02043564
Ensembl:ENSBTAT00000026409 Uniprot:G5E5N3
Length = 1287
Score = 374 (136.7 bits), Expect = 2.0e-61, Sum P(2) = 2.0e-61
Identities = 79/197 (40%), Positives = 122/197 (61%)
Query: 277 RSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGK 336
R ++ ++R LP+ K ++E+++A+ N V+I+ G TG GKTTQ+ Q++ +
Sbjct: 373 RDLQAVLQERELLPVKKFESEILEAISQNPVVIIRGATGCGKTTQVPQFILDDCIQNDRA 432
Query: 337 IGC----TQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTG-PDTVIKYMTDGMLL 391
C TQPRR++A SVA+RVA E G G+ GY++RFE P I + T G+LL
Sbjct: 433 AECNIVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLL 492
Query: 392 REILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSG 451
R++ + + S +++DE HER INTD L +L+ +V+ P++R+++ SAT+D F
Sbjct: 493 RKL--EAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCE 550
Query: 452 YFFNCNIFSIPGRTFPV 468
YFFNC I + GRTFPV
Sbjct: 551 YFFNCPIIEVYGRTFPV 567
Score = 344 (126.2 bits), Expect = 2.0e-61, Sum P(2) = 2.0e-61
Identities = 102/358 (28%), Positives = 169/358 (47%)
Query: 455 NCNIFSIPGRTFPVDINYSRQEVTDY-LDSALITVLQIHVD--EPEGDILLFLTGQEEID 511
NCN+ I G + + S ++ + LI L ++++ G +L+FL G I
Sbjct: 604 NCNL--ICGDEYGAETRISMAQLNEKETPFELIEALLLYIETLNVPGAVLVFLPGWNLI- 660
Query: 512 FACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLT 571
+ + E G +LP++S +P E Q ++F+P P G K++++TNIAE S+T
Sbjct: 661 YTMQKHLEMNPHFGSH--RYQILPLHSQIPREEQRKVFDPVPSGVTKIILSTNIAETSIT 718
Query: 572 IDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESA 631
I+ + YVID K ++ + + S+ + QR GRAGR PG C+ L + +
Sbjct: 719 INDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRAR 778
Query: 632 Y-RSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSF--DFVDPPSPQALISAMEQLYSL 688
+ R E T PE+ R L L++K + + + F ++PP A+I A L L
Sbjct: 779 FERLETHMT--PEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLREL 836
Query: 689 GALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRER 748
ALD LT LG+ +A+ P++P KM++ +GC + I I F P
Sbjct: 837 DALDANDELTPLGRILAKLPIEPRFGKMMI----MGCIFYVGDAICTISAATCFPEPFIS 892
Query: 749 QAKADEKRARFFQPE--GDHLTLLAVYEAWK-----AKNFSLPWCGENFVNSRSLKKT 799
+ K R F DH+ LL+V++AW + + +C +N +L+ T
Sbjct: 893 EGKRLGYIHRNFAGNRFSDHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMT 950
>UNIPROTKB|Q28141 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9913
"Bos taurus" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISS] [GO:0030529 "ribonucleoprotein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005730 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000247063 EMBL:X82829 IPI:IPI00714708
PIR:I46032 RefSeq:NP_776461.1 UniGene:Bt.5544
ProteinModelPortal:Q28141 SMR:Q28141 STRING:Q28141 PRIDE:Q28141
GeneID:281115 KEGG:bta:281115 CTD:1660 HOVERGEN:HBG039429
InParanoid:Q28141 KO:K13184 OrthoDB:EOG4HHP1J NextBio:20805185
GO:GO:0070937 Uniprot:Q28141
Length = 1287
Score = 374 (136.7 bits), Expect = 2.0e-61, Sum P(2) = 2.0e-61
Identities = 79/197 (40%), Positives = 122/197 (61%)
Query: 277 RSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGK 336
R ++ ++R LP+ K ++E+++A+ N V+I+ G TG GKTTQ+ Q++ +
Sbjct: 373 RDLQAVLQERELLPVKKFESEILEAISQNPVVIIRGATGCGKTTQVPQFILDDCIQNDRA 432
Query: 337 IGC----TQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTG-PDTVIKYMTDGMLL 391
C TQPRR++A SVA+RVA E G G+ GY++RFE P I + T G+LL
Sbjct: 433 AECNIVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLL 492
Query: 392 REILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSG 451
R++ + + S +++DE HER INTD L +L+ +V+ P++R+++ SAT+D F
Sbjct: 493 RKL--EAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCE 550
Query: 452 YFFNCNIFSIPGRTFPV 468
YFFNC I + GRTFPV
Sbjct: 551 YFFNCPIIEVYGRTFPV 567
Score = 344 (126.2 bits), Expect = 2.0e-61, Sum P(2) = 2.0e-61
Identities = 102/358 (28%), Positives = 169/358 (47%)
Query: 455 NCNIFSIPGRTFPVDINYSRQEVTDY-LDSALITVLQIHVD--EPEGDILLFLTGQEEID 511
NCN+ I G + + S ++ + LI L ++++ G +L+FL G I
Sbjct: 604 NCNL--ICGDEYGAETRISMAQLNEKETPFELIEALLLYIETLNVPGAVLVFLPGWNLI- 660
Query: 512 FACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLT 571
+ + E G +LP++S +P E Q ++F+P P G K++++TNIAE S+T
Sbjct: 661 YTMQKHLEMNPHFGSH--RYQILPLHSQIPREEQRKVFDPVPSGVTKIILSTNIAETSIT 718
Query: 572 IDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESA 631
I+ + YVID K ++ + + S+ + QR GRAGR PG C+ L + +
Sbjct: 719 INDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRAR 778
Query: 632 Y-RSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSF--DFVDPPSPQALISAMEQLYSL 688
+ R E T PE+ R L L++K + + + F ++PP A+I A L L
Sbjct: 779 FERLETHMT--PEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLREL 836
Query: 689 GALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRER 748
ALD LT LG+ +A+ P++P KM++ +GC + I I F P
Sbjct: 837 DALDANDELTPLGRILAKLPIEPRFGKMMI----MGCIFYVGDAICTISAATCFPEPFIS 892
Query: 749 QAKADEKRARFFQPE--GDHLTLLAVYEAWK-----AKNFSLPWCGENFVNSRSLKKT 799
+ K R F DH+ LL+V++AW + + +C +N +L+ T
Sbjct: 893 EGKRLGYIHRNFAGNRFSDHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMT 950
>RGD|1308548 [details] [associations]
symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide 9"
species:10116 "Rattus norvegicus" [GO:0001085 "RNA polymerase II
transcription factor binding" evidence=IEA;ISO] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0007623 "circadian rhythm" evidence=IEA;ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA;ISO]
[GO:0034605 "cellular response to heat" evidence=IEA;ISO]
[GO:0070934 "CRD-mediated mRNA stabilization" evidence=IEA;ISO]
[GO:0070937 "CRD-mediated mRNA stability complex" evidence=IEA;ISO]
InterPro:IPR001159 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137
PROSITE:PS51194 SMART:SM00358 SMART:SM00490 SMART:SM00847
InterPro:IPR014720 RGD:1308548 GO:GO:0005524 Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 KO:K13184 OrthoDB:EOG4HHP1J
EMBL:CH473958 IPI:IPI00947663 RefSeq:NP_001100654.1
UniGene:Rn.107359 Ensembl:ENSRNOT00000064860 GeneID:304859
KEGG:rno:304859 UCSC:RGD:1308548 NextBio:653729 Uniprot:D4A9D6
Length = 1174
Score = 372 (136.0 bits), Expect = 2.4e-61, Sum P(2) = 2.4e-61
Identities = 82/204 (40%), Positives = 123/204 (60%)
Query: 271 AFTFGQRSKL-SIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEA 329
A+ Q L S+ ++R LP+ K + E+++A+ N V+I+ G TG GKTTQ+ QY+ +
Sbjct: 372 AYQMEQDHNLQSVLQERELLPVKKFEAEILEAISQNSVVIIRGATGCGKTTQVPQYILDD 431
Query: 330 GYTTKGKIGC----TQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTG-PDTVIKY 384
C TQPRR++A +VA+RVA E G G+ GY++RFE P I +
Sbjct: 432 FIQNDRAAECNIVVTQPRRISAVAVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMF 491
Query: 385 MTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATL 444
T G+LLR++ + + S +++DE HER INTD L +L+ +V P++R+++ SAT+
Sbjct: 492 CTVGVLLRKL--EAGIRGISHVIVDEIHERDINTDFLLVVLRDVVLAYPEVRIVLMSATI 549
Query: 445 DAERFSGYFFNCNIFSIPGRTFPV 468
D F YFFNC I + GRTFPV
Sbjct: 550 DTTMFCEYFFNCPIIEVYGRTFPV 573
Score = 344 (126.2 bits), Expect = 2.4e-61, Sum P(2) = 2.4e-61
Identities = 103/358 (28%), Positives = 172/358 (48%)
Query: 455 NCNIFSIP--GRTFPVDINYSRQEVTDY-LDSALITVLQIHVDEPEGDILLFLTGQEEID 511
NCN+ G + ++ ++ T + L AL+ ++ ++ P G +L+FL G I
Sbjct: 610 NCNLICGDEYGPETKLSMSQLNEKETPFELIEALLKYIET-LNVP-GAVLVFLPGWNLI- 666
Query: 512 FACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLT 571
+ + E G +LP++S +P E Q ++F+P P G KV+++TNIAE S+T
Sbjct: 667 YTMQKHLENNSHFGSH--RYQILPLHSQIPREEQRKVFDPVPDGVTKVILSTNIAETSIT 724
Query: 572 IDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESA 631
I+ + YVID K ++ + + S+ + QR GRAGR PG C+ L + +
Sbjct: 725 INDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRAR 784
Query: 632 Y-RSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSF--DFVDPPSPQALISAMEQLYSL 688
+ R E T PE+ R L L++K + + + F ++PP A+I A L L
Sbjct: 785 FDRLETHMT--PEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLREL 842
Query: 689 GALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRER 748
ALD LT LG+ +A+ P++P KM++ +GC + + I F P
Sbjct: 843 DALDANDELTPLGRILAKLPIEPRFGKMMI----MGCIFYVGDAVCTISAATCFPEPFIS 898
Query: 749 QAKADEKRARFFQPE--GDHLTLLAVYEAWKAKNFS-----LPWCGENFVNSRSLKKT 799
+ K R F DH+ LL+V++AW S + +C + +N +L+ T
Sbjct: 899 EGKRLGYIHRNFAGNRFSDHVALLSVFQAWDDARMSGEEAEIRFCEQKRLNMATLRMT 956
>MGI|MGI:108177 [details] [associations]
symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide 9"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001085 "RNA polymerase II transcription factor
binding" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005813 "centrosome" evidence=ISO]
[GO:0007623 "circadian rhythm" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=ISO] [GO:0034605 "cellular response to heat"
evidence=IDA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=ISO] [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISO] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 MGI:MGI:108177 GO:GO:0005524
GO:GO:0034605 GO:GO:0005730 GO:GO:0003677 GO:GO:0007623
Gene3D:3.30.160.20 GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247063 CTD:1660
HOVERGEN:HBG039429 KO:K13184 OrthoDB:EOG4HHP1J GO:GO:0070937
EMBL:U91922 EMBL:AF023530 EMBL:AY512925 EMBL:BC089159 EMBL:AK013423
EMBL:U92080 IPI:IPI00339468 IPI:IPI00607914 IPI:IPI00875791
RefSeq:NP_031868.2 UniGene:Mm.20000 PDB:1UIL PDB:1WHQ PDB:2RS6
PDB:2RS7 PDBsum:1UIL PDBsum:1WHQ PDBsum:2RS6 PDBsum:2RS7
ProteinModelPortal:O70133 SMR:O70133 IntAct:O70133 STRING:O70133
PhosphoSite:O70133 PaxDb:O70133 PRIDE:O70133 GeneID:13211
KEGG:mmu:13211 UCSC:uc007czy.1 InParanoid:O70133 ChiTaRS:DHX9
EvolutionaryTrace:O70133 NextBio:283382 CleanEx:MM_DHX9
Genevestigator:O70133 GermOnline:ENSMUSG00000042699 Uniprot:O70133
Length = 1380
Score = 371 (135.7 bits), Expect = 4.2e-61, Sum P(2) = 4.2e-61
Identities = 79/193 (40%), Positives = 119/193 (61%)
Query: 281 SIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGC- 339
S+ ++R LP+ K + E+++A+ N V+I+ G TG GKTTQ+ QY+ + C
Sbjct: 382 SVLQERELLPVKKFEAEILEAISSNSVVIIRGATGCGKTTQVPQYILDDFIQNDRAAECN 441
Query: 340 ---TQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTG-PDTVIKYMTDGMLLREIL 395
TQPRR++A +VA+RVA E G G+ GY++RFE P I + T G+LLR++
Sbjct: 442 IVVTQPRRISAVAVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL- 500
Query: 396 IDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFN 455
+ + S +++DE HER INTD L +L+ +V P++R+++ SAT+D F YFFN
Sbjct: 501 -EAGIRGISHVIVDEIHERDINTDFLLVVLRDVVLAYPEVRIVLMSATIDTTMFCEYFFN 559
Query: 456 CNIFSIPGRTFPV 468
C I + GRTFPV
Sbjct: 560 CPIIEVYGRTFPV 572
Score = 345 (126.5 bits), Expect = 4.2e-61, Sum P(2) = 4.2e-61
Identities = 103/358 (28%), Positives = 172/358 (48%)
Query: 455 NCNIFSIP--GRTFPVDINYSRQEVTDY-LDSALITVLQIHVDEPEGDILLFLTGQEEID 511
NCN+ G + ++ ++ T + L AL+ ++ ++ P G +L+FL G I
Sbjct: 609 NCNLICGDEYGPETKLSMSQLNEKETPFELIEALLKYIET-LNVP-GAVLVFLPGWNLI- 665
Query: 512 FACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLT 571
+ + E G +LP++S +P E Q ++F+P P G KV+++TNIAE S+T
Sbjct: 666 YTMQKHLENNSHFGSH--RYQILPLHSQIPREEQRKVFDPVPDGVTKVILSTNIAETSIT 723
Query: 572 IDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESA 631
I+ + YVID K ++ + + S+ + QR GRAGR PG C+ L + +
Sbjct: 724 INDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRAR 783
Query: 632 Y-RSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSF--DFVDPPSPQALISAMEQLYSL 688
+ R E T PE+ R L L++K + + + F ++PP A+I A L L
Sbjct: 784 FDRLETHMT--PEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAIIEAEHTLREL 841
Query: 689 GALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRER 748
ALD LT LG+ +A+ P++P KM++ +GC + + I F P
Sbjct: 842 DALDANDELTPLGRILAKLPIEPRFGKMMI----MGCIFYVGDAVCTISAATCFPEPFIS 897
Query: 749 QAKADEKRARFFQPE--GDHLTLLAVYEAWKAKNFS-----LPWCGENFVNSRSLKKT 799
+ K R F DH+ LL+V++AW S + +C + +N +L+ T
Sbjct: 898 EGKRLGYIHRNFAGNRFSDHVALLSVFQAWDDARMSGEEAEIRFCEQKRLNMATLRMT 955
>UNIPROTKB|I3LHZ6 [details] [associations]
symbol:DHX9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074257 OMA:DDWIRLQ
Ensembl:ENSSSCT00000025297 Uniprot:I3LHZ6
Length = 1274
Score = 371 (135.7 bits), Expect = 6.5e-61, Sum P(3) = 6.5e-61
Identities = 79/197 (40%), Positives = 122/197 (61%)
Query: 277 RSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGK 336
R +I ++R LP+ K ++E+++A+ N V+I+ G TG GKTTQ+ Q++ +
Sbjct: 372 RDLQAILQERELLPVKKFESEILEAISQNPVVIVRGATGCGKTTQVPQFILDDFIQNDRA 431
Query: 337 IGC----TQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTG-PDTVIKYMTDGMLL 391
C TQPRR++A SVA+RVA E G G+ GY++RFE P I + T G+LL
Sbjct: 432 AECNIVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLL 491
Query: 392 REILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSG 451
R++ + + S +++DE HER INTD L +L+ +V+ P++R+++ SAT+D F
Sbjct: 492 RKL--EAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCE 549
Query: 452 YFFNCNIFSIPGRTFPV 468
YFFNC I + GRT+PV
Sbjct: 550 YFFNCPIIEVYGRTYPV 566
Score = 346 (126.9 bits), Expect = 6.5e-61, Sum P(3) = 6.5e-61
Identities = 104/356 (29%), Positives = 172/356 (48%)
Query: 455 NCNIFSIPGRTFPVDINYSRQEVTDY-LDSALITVLQIHVDEPEGDILLFLTGQEEIDFA 513
NCN+ I G + + + ++ T + L AL+ ++ ++ P G +L+FL G I +
Sbjct: 603 NCNL--ICGDEYGLXMAQLNEKETPFELIEALLKYIET-LNVP-GAVLVFLPGWNLI-YT 657
Query: 514 CESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTID 573
+ E G +LP++S +P E Q ++F+P P G KV+++TNIAE S+TI+
Sbjct: 658 MQKHLEMNPHFGNH--RYQILPLHSQIPREEQRKVFDPVPAGVTKVILSTNIAETSITIN 715
Query: 574 GIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAY- 632
+ YVID K ++ + + S+ + QR GRAGR PG C+ L + + +
Sbjct: 716 DVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFD 775
Query: 633 RSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSF--DFVDPPSPQALISAMEQLYSLGA 690
R E T PE+ R L L++K + + + F ++PP A+I A L L A
Sbjct: 776 RLETHMT--PEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRELDA 833
Query: 691 LDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQA 750
LD LT LG+ +A+ P++P KM++ +GC + I I F P +
Sbjct: 834 LDANDELTPLGRILAKLPIEPRFGKMMI----MGCIFYVGDAICTISAATCFPEPFISEG 889
Query: 751 KADEKRARFFQPE--GDHLTLLAVYEAWK-----AKNFSLPWCGENFVNSRSLKKT 799
K R F DH+ LL+V++AW + + +C +N +L+ T
Sbjct: 890 KRLGYIHRNFAGNRFSDHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMT 945
Score = 44 (20.5 bits), Expect = 6.5e-61, Sum P(3) = 6.5e-61
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 216 EQQLRTMIDSIPKDLNRPWEDP-MPET 241
E QL+ ++ + D+ P EDP +P T
Sbjct: 279 EHQLQNIVQELDLDIVPPPEDPSVPVT 305
>UNIPROTKB|J3KSW6 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR002464
InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00690 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 HGNC:HGNC:18018 ChiTaRS:DHX40 EMBL:AC091271
EMBL:AC004167 Ensembl:ENST00000580030 Uniprot:J3KSW6
Length = 268
Score = 612 (220.5 bits), Expect = 1.0e-59, P = 1.0e-59
Identities = 124/235 (52%), Positives = 167/235 (71%)
Query: 288 SLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCTQPRRVAA 347
+ PI K + ++IQAV DN LI+ G TGSGKTTQL +YL EAG++ G IG TQPR+VAA
Sbjct: 32 TFPIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAA 91
Query: 348 TSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIM 407
SVA+RVAEE C LG +VGY +RF+DC+ +T IKYMTDG LL+ IL D NL+++SVI+
Sbjct: 92 ISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVII 151
Query: 408 LDEAHERTINTDVLFGLLKQLVK-----RRPDLRLIVTSATLDAERFSGYFFNCNIFSIP 462
LDEAHERT+ TD+LFGLLK+L + R+ L+++V SAT++ + S +F NC IF IP
Sbjct: 152 LDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIP 211
Query: 463 GRTFPVDINYSR------QEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEID 511
GR +PV + +E T Y+ + + + IH++E GDIL+FLTGQ EI+
Sbjct: 212 GRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIE 266
>UNIPROTKB|Q5THQ9 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR002464
PROSITE:PS00690 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 EMBL:AL023803
UniGene:Hs.444520 HGNC:HGNC:15861 IPI:IPI01009669 SMR:Q5THQ9
Ensembl:ENST00000441485 HOGENOM:HOG000202213 HOVERGEN:HBG079487
Uniprot:Q5THQ9
Length = 302
Score = 612 (220.5 bits), Expect = 1.0e-59, P = 1.0e-59
Identities = 142/294 (48%), Positives = 193/294 (65%)
Query: 280 LSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKI-G 338
+SI E+R+SL +N V++ + I + + + +YLAEAG+T +G++ G
Sbjct: 16 VSISEERQSLA----ENSGTTVVYNPYAALSIEQ--QRQKLPVFKYLAEAGWTAEGRVVG 69
Query: 339 CTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGP-DTVIKYMTDGMLLREILID 397
TQPRRVAA +VA RVAEE G LG EVGY IRF+DCT T IK++TDGML+RE+++D
Sbjct: 70 VTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVD 129
Query: 398 ENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFN-- 455
L++YSVIMLDEAHERT+ TD+ GLLK++ K+R DLRLIV SATLDA++F FFN
Sbjct: 130 PLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRD-FFNQN 188
Query: 456 ---------CNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTG 506
C I ++ GRTFPVDI Y + V DY+ S + TV++IH E +GD+L FLTG
Sbjct: 189 ETSDPARDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVVKIHQTEGDGDVLAFLTG 248
Query: 507 QEEIDFACESLCEKIKALGKDVPE--LVVLPVYSALPSEIQSRIFEPAPPGGRK 558
QEE++ L E+ +AL + + L VLP+Y+ LPS Q ++FE RK
Sbjct: 249 QEEVETVVSMLIEQARALARTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRK 302
>ASPGD|ASPL0000008624 [details] [associations]
symbol:AN5839 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:BN001301 EMBL:AACD01000100
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GO:GO:0008026 OrthoDB:EOG4TXG12 RefSeq:XP_663443.1
EnsemblFungi:CADANIAT00007203 GeneID:2870747 KEGG:ani:AN5839.2
HOGENOM:HOG000213693 OMA:KNIRRAI Uniprot:Q5B0U1
Length = 1436
Score = 365 (133.5 bits), Expect = 1.8e-59, Sum P(3) = 1.8e-59
Identities = 85/244 (34%), Positives = 143/244 (58%)
Query: 247 AQELRGVGLSARDMPEWKKNAYGKAFTFGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQ 306
A+E G+ + W + A AF + + + R LPI+ KNE++ ++ ++
Sbjct: 612 AKEAPGINEQLSQI--WMEKASTPAFQY-------MVQSRMQLPIWTFKNEILNTLNSHR 662
Query: 307 VLILIGETGSGKTTQLAQYLAEAGYTTKG--KIGCTQPRRVAATSVAKRVAEEFGCR--- 361
LI+ ETGSGK+TQ+ ++ E + KI T+PRR++A S+A+RV+EE G
Sbjct: 663 ALIICSETGSGKSTQIPSFILEHEMLSGRPCKIYVTEPRRISAISLARRVSEELGESKND 722
Query: 362 LGEE---VGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINT 418
+G +G+A+R E P T + + T G+++R + ++ + ++LDE HER+I++
Sbjct: 723 VGTSRSLIGFAVRLESKVSPATRLVFATTGVVVRMLERPDDFQDITHVVLDEVHERSIDS 782
Query: 419 DVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPVDINYSRQ--E 476
D L +L++L+++R DL+LI+ SAT+DA RFS Y + +IPGRTFPV+ + E
Sbjct: 783 DFLLIVLRRLMQKRQDLKLILMSATVDANRFSTYLGGVPVLNIPGRTFPVETKFLEDAIE 842
Query: 477 VTDY 480
+T Y
Sbjct: 843 LTQY 846
Score = 343 (125.8 bits), Expect = 1.8e-59, Sum P(3) = 1.8e-59
Identities = 108/348 (31%), Positives = 176/348 (50%)
Query: 471 NYSRQ------EVTDY-LDSALITVLQIHV-DEPEGD-----ILLFLTGQEEID-FACES 516
NYS+Q +Y LD LI L + + PE + IL+FL G EI E
Sbjct: 880 NYSKQTRETIMNFDEYRLDYQLIKKLLMKLATAPEMEYYSKAILVFLPGMAEIRRLNDEL 939
Query: 517 LCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIF 576
L E G ++ ++S++ S+ Q + F P G RK+V+ATNIAE +TI I
Sbjct: 940 LSEPTFQHG-----WIIHALHSSIASDEQEKAFVVPPDGMRKIVIATNIAETGITIPDIT 994
Query: 577 YVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEM 636
VID G K ++ +++L LV IS+A+A QR GRAGR G C+ ++T+ + + +
Sbjct: 995 AVIDAGKEKTMRFDERRQLSRLVEAFISRANAKQRRGRAGRVQRGICFHMFTKHRHDNLL 1054
Query: 637 SPTTIPEIQRINLVHTTLTMKAMGINNL--LSFDFVDPPSPQALISAMEQLYSLGALDEE 694
+ PE+ R++L L +K + + + +DPPS + + A++ L + AL
Sbjct: 1055 AEQQTPEMLRLSLQDLVLRVKICKLGEVEPTLLEALDPPSSKNIRRAIDALKEVKALTST 1114
Query: 695 GLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADE 754
LT LG+++A+ PLD L K+++ C D ++I A++ F A+ +
Sbjct: 1115 ENLTPLGQQLAKLPLDVFLGKLIIHGAFFKCLDAAISIAAILSCKSPFVNTMGSNAQKEA 1174
Query: 755 KRARFFQPEGDHLTLLAVYEAWKAKNFSLP------WCGENFVNSRSL 796
R F + + D LT+ Y AWK + S P +C +NF++ ++L
Sbjct: 1175 VRLGFRRGDSDLLTVYNAYCAWK-RTRSTPGANEYAFCRKNFLSPQTL 1221
Score = 42 (19.8 bits), Expect = 1.8e-59, Sum P(3) = 1.8e-59
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 235 EDPMPETGERHLAQELRGVGLSARDMPEW 263
E+P E G + +EL ++ RD +W
Sbjct: 411 EEPTLELGV--ITEELNKASIATRDFGKW 437
>UNIPROTKB|Q5R874 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9601
"Pongo abelii" [GO:0030529 "ribonucleoprotein complex"
evidence=ISS] [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISS] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 HOVERGEN:HBG039429 KO:K13184
OrthoDB:EOG4HHP1J GO:GO:0070937 OMA:DDWIRLQ GO:GO:0070934
EMBL:CR859880 RefSeq:XP_002809755.1 UniGene:Pab.8432
ProteinModelPortal:Q5R874 SMR:Q5R874 PRIDE:Q5R874
Ensembl:ENSPPYT00000000510 GeneID:100449914 KEGG:pon:100449914
InParanoid:Q5R874 Uniprot:Q5R874
Length = 1269
Score = 371 (135.7 bits), Expect = 1.8e-59, Sum P(3) = 1.8e-59
Identities = 78/193 (40%), Positives = 121/193 (62%)
Query: 281 SIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGC- 339
+I ++R LP+ K ++E+++A+ N V+I+ G TG GKTTQ+ Q++ + C
Sbjct: 380 AILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKTTQVPQFILDDFIQNDRAAECN 439
Query: 340 ---TQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTG-PDTVIKYMTDGMLLREIL 395
TQPRR++A SVA+RVA E G G+ GY++RFE P I + T G+LLR++
Sbjct: 440 IVVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL- 498
Query: 396 IDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFN 455
+ + S +++DE HER INTD L +L+ +V+ P++R+++ SAT+D F YFFN
Sbjct: 499 -EAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFN 557
Query: 456 CNIFSIPGRTFPV 468
C I + GRT+PV
Sbjct: 558 CPIIEVYGRTYPV 570
Score = 338 (124.0 bits), Expect = 1.8e-59, Sum P(3) = 1.8e-59
Identities = 103/358 (28%), Positives = 168/358 (46%)
Query: 455 NCNIFSIPGRTFPVDINYSRQEVTDY-LDSALITVLQIHVD--EPEGDILLFLTGQEEID 511
NCN+ I G + + S ++ + LI L +++ G +L+FL G I
Sbjct: 607 NCNL--ICGDEYGPETRLSMSQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLI- 663
Query: 512 FACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLT 571
+ + E G +LP++S +P E Q ++F+P P G KV+++TNIAE S+T
Sbjct: 664 YTMQKHLEMNPHFGSH--RYQILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSIT 721
Query: 572 IDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESA 631
I+ + YVID K ++ + + S+ + QR GRAGR PG C+ L + +
Sbjct: 722 INDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRAR 781
Query: 632 Y-RSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSF--DFVDPPSPQALISAMEQLYSL 688
+ R E T PE+ R L L++K + + + F ++PP A+I A L L
Sbjct: 782 FERLETHMT--PEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLREL 839
Query: 689 GALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRER 748
ALD LT LG+ +A+ P++P KM++ +GC + I I F P
Sbjct: 840 DALDANDELTPLGRILAKLPIEPRFGKMMI----MGCIFYVGDAICTIAAATCFPEPFIN 895
Query: 749 QAKADEKRARFFQPE--GDHLTLLAVYEAWK-----AKNFSLPWCGENFVNSRSLKKT 799
+ K R F DH+ LL+V++AW + + +C +N +L+ T
Sbjct: 896 EGKRLGYIHRNFAGNRFSDHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMT 953
Score = 38 (18.4 bits), Expect = 1.8e-59, Sum P(3) = 1.8e-59
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 216 EQQLRTMIDSIPKDLNRPWEDP 237
E QL+ +I + ++ P EDP
Sbjct: 283 EHQLQNIIQELNLEILPPPEDP 304
WARNING: HSPs involving 64 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.135 0.391 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 800 781 0.00094 121 3 11 22 0.40 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 314
No. of states in DFA: 624 (66 KB)
Total size of DFA: 364 KB (2181 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 69.62u 0.17s 69.79t Elapsed: 00:00:03
Total cpu time: 69.72u 0.18s 69.90t Elapsed: 00:00:04
Start: Tue May 21 09:08:12 2013 End: Tue May 21 09:08:16 2013
WARNINGS ISSUED: 2