BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003721
(800 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q38953|DHX8_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase
OS=Arabidopsis thaliana GN=At3g26560 PE=1 SV=2
Length = 1168
Score = 1168 bits (3022), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 572/667 (85%), Positives = 626/667 (93%), Gaps = 1/667 (0%)
Query: 132 SGVLASNEYPRYDEEEEEGFASWAEGDEEELEIELSEDQPAFLQGQTRVSVDLSPVKVFK 191
SGVL +E+P YDE+ + G EG EEELEIE++ED+PAFLQGQTR SVD+SPVK+FK
Sbjct: 359 SGVLRVDEFPMYDEDGD-GMLYQEEGAEEELEIEMNEDEPAFLQGQTRYSVDMSPVKIFK 417
Query: 192 NPEGSLSRTAALQSALTKERREVREQQLRTMIDSIPKDLNRPWEDPMPETGERHLAQELR 251
NPEGSLSR AALQSALTKERRE+REQQ RTM+DSIPKDLNRPWEDPMPETGERHLAQELR
Sbjct: 418 NPEGSLSRAAALQSALTKERREMREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELR 477
Query: 252 GVGLSARDMPEWKKNAYGKAFTFGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILI 311
GVGLSA DMPEWKK+A+GK TFGQRSKLSIQEQR SLPI+KLK ELIQAVHDNQVL++I
Sbjct: 478 GVGLSAYDMPEWKKDAFGKTPTFGQRSKLSIQEQRESLPIYKLKKELIQAVHDNQVLVVI 537
Query: 312 GETGSGKTTQLAQYLAEAGYTTKGKIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIR 371
GETGSGKTTQ+ QYLAEAGYTTKGKIGCTQPRRVAA SVAKRVAEEFGCRLGEEVGYAIR
Sbjct: 538 GETGSGKTTQVTQYLAEAGYTTKGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIR 597
Query: 372 FEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKR 431
FEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTI+TDVLFGLLK+L+KR
Sbjct: 598 FEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTIHTDVLFGLLKKLMKR 657
Query: 432 RPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQI 491
R DLRLIVTSATLDAE+FSGYFFNCNIF+IPGRTFPV+I Y++Q TDYLD+ALITVLQI
Sbjct: 658 RLDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQI 717
Query: 492 HVDEPEGDILLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEP 551
H+ EPEGDIL+FLTGQEEID AC+SL E++K LGK+VPEL++LPVYSALPSE+QSRIF+P
Sbjct: 718 HLTEPEGDILVFLTGQEEIDSACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDP 777
Query: 552 APPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQR 611
PPG RKVVVATNIAEASLTIDGI+YV+DPGFAKQNVYNPKQ L+SLVITPISQASA QR
Sbjct: 778 PPPGKRKVVVATNIAEASLTIDGIYYVVDPGFAKQNVYNPKQGLESLVITPISQASAKQR 837
Query: 612 AGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVD 671
AGRAGRTGPGKCYRLYTESAYR+EM PT+IPEIQRINL TTLTMKAMGIN+LLSFDF+D
Sbjct: 838 AGRAGRTGPGKCYRLYTESAYRNEMPPTSIPEIQRINLGMTTLTMKAMGINDLLSFDFMD 897
Query: 672 PPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILT 731
PP PQALISAMEQLYSLGALDEEGLLTKLG+KMAEFPL+PPLSKMLLASVDLGCSDEILT
Sbjct: 898 PPQPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLEPPLSKMLLASVDLGCSDEILT 957
Query: 732 IIAMIQTGHIFTRPRERQAKADEKRARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFV 791
+IAMIQTG+IF RPRE+QA+AD+KRA+FFQPEGDHLTLLAVYEAWKAKNFS PWC ENF+
Sbjct: 958 MIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFI 1017
Query: 792 NSRSLKK 798
SRSL++
Sbjct: 1018 QSRSLRR 1024
Score = 90.5 bits (223), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 67/89 (75%)
Query: 7 IRELTYLSLLSKICSELETHLGFIDKVLAEFISESGRNSETVEIFDDKLKEYGADLPNYL 66
+ +L +LSL+S +C+ELETHLG +KVLAEFI + GR+SETV+ FD LKE GA++P+Y
Sbjct: 6 LNKLNHLSLVSNVCNELETHLGSAEKVLAEFIIDLGRHSETVDEFDKNLKEAGAEMPDYF 65
Query: 67 VRTLFNVIHTILHPKPKLQSKKKSGRDRK 95
VR+L IH I PKPK + KK+ G D+K
Sbjct: 66 VRSLLTTIHGIYPPKPKSEKKKEEGDDQK 94
>sp|Q54F05|DHX8_DICDI ATP-dependent RNA helicase dhx8 OS=Dictyostelium discoideum GN=dhx8
PE=3 SV=1
Length = 1160
Score = 958 bits (2477), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/671 (67%), Positives = 556/671 (82%), Gaps = 5/671 (0%)
Query: 131 VSGVLASNEYPRYDEEEEEGFASWAEGD-EEELEIELSEDQPAFLQGQTRVSVDLSPVKV 189
SG+L+ E P YD+E G + E EE+ +IE +ED+P FL+G LSP+K+
Sbjct: 349 ASGILSVPEMPNYDKEV--GLVNHDEEQPEEDFDIERNEDEPQFLKGTRMNMQQLSPIKI 406
Query: 190 FKNPEGSLSRTAALQSALTKERREVREQQLRTMIDSIPKDLNRPWEDPMPETGERHLAQE 249
K P GSL R A+ Q+AL+KER+E + QQ M+DSIPKDL+ PW DPMPE GERHLAQE
Sbjct: 407 VKKPNGSLQRAASTQTALSKERKEEKNQQRNEMMDSIPKDLSLPWHDPMPEAGERHLAQE 466
Query: 250 LRGVGLSARD--MPEWKKNAYGKAFTFGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQV 307
+R + D +PEWKK G +G+ + SI+EQR SLPIF L+ +QAV ++Q+
Sbjct: 467 IRSIAGQGIDTEIPEWKKVTQGSHIQYGKATSRSIKEQRESLPIFPLREAFLQAVSEHQL 526
Query: 308 LILIGETGSGKTTQLAQYLAEAGYTTKGKIGCTQPRRVAATSVAKRVAEEFGCRLGEEVG 367
L++IGETGSGKTTQ+AQYLAEAGY T+GKIGCTQPRRVAA SV+KRVAEEFGC+LG+EVG
Sbjct: 527 LVVIGETGSGKTTQMAQYLAEAGYGTRGKIGCTQPRRVAAMSVSKRVAEEFGCQLGQEVG 586
Query: 368 YAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQ 427
YAIRFEDCT P+T+IK+MTDG+LLRE L+D NLS YSVI+LDEAHERTI+TDVLFGLLKQ
Sbjct: 587 YAIRFEDCTSPETIIKFMTDGILLRECLLDPNLSAYSVIILDEAHERTISTDVLFGLLKQ 646
Query: 428 LVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPVDINYSRQEVTDYLDSALIT 487
++RRP+L++++TSATL+AE+FS YF N +F IPGRTFPVDI Y++ DYLD++LIT
Sbjct: 647 ALQRRPELKVLITSATLEAEKFSKYFMNAQLFIIPGRTFPVDIRYTKDPEADYLDASLIT 706
Query: 488 VLQIHVDEPEGDILLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPVYSALPSEIQSR 547
V+QIH+ EP GDILLFLTGQEEID AC+ L E++K+LG +VP+L++LPVYSALPSE+Q++
Sbjct: 707 VMQIHLSEPPGDILLFLTGQEEIDAACQILYERMKSLGSNVPDLIILPVYSALPSEMQTK 766
Query: 548 IFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQAS 607
IFEPAPPG RKVV+ATNIAE SLTIDGI+YVIDPGF+KQ +NPK +DSLV+ PISQA+
Sbjct: 767 IFEPAPPGSRKVVIATNIAETSLTIDGIYYVIDPGFSKQKCFNPKNGMDSLVVAPISQAA 826
Query: 608 ALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSF 667
A QR+GRAGRTGPGKCYRLYTESA+++EM ++IPEIQR NL +T LTMKAMGIN+LL+F
Sbjct: 827 ARQRSGRAGRTGPGKCYRLYTESAFKNEMLASSIPEIQRTNLGNTVLTMKAMGINDLLNF 886
Query: 668 DFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSD 727
DF+DPP Q L+SAMEQLYSLGALDEEGLLT+LG+KMAEFPLDP LSKML+ASVDLGCSD
Sbjct: 887 DFMDPPPVQTLVSAMEQLYSLGALDEEGLLTRLGRKMAEFPLDPQLSKMLIASVDLGCSD 946
Query: 728 EILTIIAMIQTGHIFTRPRERQAKADEKRARFFQPEGDHLTLLAVYEAWKAKNFSLPWCG 787
EILT++AM+ ++F RP+E+QA AD+K+A+FFQPEGDHLTLL VYE+WK FS PWC
Sbjct: 947 EILTVVAMLSVQNVFYRPKEKQALADQKKAKFFQPEGDHLTLLNVYESWKNSKFSNPWCF 1006
Query: 788 ENFVNSRSLKK 798
ENFV +RSL++
Sbjct: 1007 ENFVQARSLRR 1017
Score = 43.1 bits (100), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%)
Query: 9 ELTYLSLLSKICSELETHLGFIDKVLAEFISESGRNSETVEIFDDKLKEYGADLPNYLVR 68
+L + L S++C+ELE +G DK+LAEF+ + ++ F+ + E D P L
Sbjct: 3 KLERIELESQVCNELERFIGSGDKLLAEFVIGLADENPKLKDFNKAISENVPDFPESLSS 62
Query: 69 TLFNVIHTI 77
LFN+I +
Sbjct: 63 HLFNLIEKM 71
>sp|Q14562|DHX8_HUMAN ATP-dependent RNA helicase DHX8 OS=Homo sapiens GN=DHX8 PE=1 SV=1
Length = 1220
Score = 929 bits (2401), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/668 (65%), Positives = 557/668 (83%), Gaps = 2/668 (0%)
Query: 132 SGVLASNEYPRYDEEEEEGFASWAEGDEEELEIELSEDQPAFLQGQTRVSVDLSPVKVFK 191
+ VL+ E+P +DEE + ++E+LEIEL E++P FL+G T+ S+D+SP+K+ K
Sbjct: 408 ANVLSKEEFPDFDEETG-ILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPIKIVK 466
Query: 192 NPEGSLSRTAALQSALTKERREVREQQLRTMIDSIPKDLNRPWEDPMPETGERHLAQELR 251
NP+GSLS+ A +QSAL KERRE+++ Q +DSIP LN+ W DP+P+ R +A +R
Sbjct: 467 NPDGSLSQAAMMQSALAKERRELKQAQREAEMDSIPMGLNKHWVDPLPDAEGRQIAANMR 526
Query: 252 GVGLSARDMPEWKKNAYG-KAFTFGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLIL 310
G+G+ D+PEWKK+A+G ++G+++++SI EQR SLPI+KLK +L+QAVHDNQ+LI+
Sbjct: 527 GIGMMPNDIPEWKKHAFGGNKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIV 586
Query: 311 IGETGSGKTTQLAQYLAEAGYTTKGKIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAI 370
IGETGSGKTTQ+ QYLAEAGYT++GKIGCTQPRRVAA SVAKRV+EEFGC LG+EVGY I
Sbjct: 587 IGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTI 646
Query: 371 RFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVK 430
RFEDCT P+TVIKYMTDGMLLRE LID +L+QY++IMLDEAHERTI+TDVLFGLLK+ V+
Sbjct: 647 RFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQ 706
Query: 431 RRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQ 490
+R D++LIVTSATLDA +FS YF+ IF+IPGRT+PV+I Y+++ TDYLD++LITV+Q
Sbjct: 707 KRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQ 766
Query: 491 IHVDEPEGDILLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFE 550
IH+ EP GDIL+FLTGQEEID ACE L E++K+LG DVPEL++LPVYSALPSE+Q+RIF+
Sbjct: 767 IHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFD 826
Query: 551 PAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQ 610
PAPPG RKVV+ATNIAE SLTIDGI+YV+DPGF KQ VYN K +D LV+TPISQA A Q
Sbjct: 827 PAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQ 886
Query: 611 RAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFV 670
RAGRAGRTGPGKCYRLYTE AYR EM T +PEIQR NL T L++KAMGIN+LLSFDF+
Sbjct: 887 RAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFM 946
Query: 671 DPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEIL 730
D P + LI+AMEQLY+LGALD+EGLLT+LG++MAEFPL+P L KML+ SV LGCS+E+L
Sbjct: 947 DAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEML 1006
Query: 731 TIIAMIQTGHIFTRPRERQAKADEKRARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENF 790
TI++M+ ++F RP+++QA AD+K+A+F Q EGDHLTLLAVY +WK FS PWC ENF
Sbjct: 1007 TIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENF 1066
Query: 791 VNSRSLKK 798
+ +RSL++
Sbjct: 1067 IQARSLRR 1074
Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 60/115 (52%), Gaps = 5/115 (4%)
Query: 9 ELTYLSLLSKICSELETHLGFIDKVLAEFISESGRNSETVEIFDDKLKEYGADLPNYLVR 68
+L YLSL+SK+C+EL+ HLG DK LAEF+ + T + F L + GA+ + L+
Sbjct: 24 KLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKNTTFDTFKASLVKNGAEFTDSLIS 83
Query: 69 TLFNVIHTILHPKPKLQSKKKSGRDRKTNYKAEFENDRERSGRYCKSNPPMLKDM 123
L +I T+ P +K + +D K E E +E C+ + P ++ M
Sbjct: 84 NLLRLIQTMRPP-----AKPSTSKDPVVKPKTEKEKLKELFPVLCQPDNPSVRTM 133
>sp|A2A4P0|DHX8_MOUSE ATP-dependent RNA helicase DHX8 OS=Mus musculus GN=Dhx8 PE=2 SV=1
Length = 1244
Score = 929 bits (2400), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/668 (65%), Positives = 557/668 (83%), Gaps = 2/668 (0%)
Query: 132 SGVLASNEYPRYDEEEEEGFASWAEGDEEELEIELSEDQPAFLQGQTRVSVDLSPVKVFK 191
+ VL+ E+P +DEE + ++E+LEIEL E++P FL+G T+ S+D+SP+K+ K
Sbjct: 432 ANVLSKEEFPDFDEETG-ILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPIKIVK 490
Query: 192 NPEGSLSRTAALQSALTKERREVREQQLRTMIDSIPKDLNRPWEDPMPETGERHLAQELR 251
NP+GSLS+ A +QSAL KERRE+++ Q +DSIP LN+ W DP+P+ R +A +R
Sbjct: 491 NPDGSLSQAAMMQSALAKERRELKQAQREAEMDSIPMGLNKHWVDPLPDAEGRQIAANMR 550
Query: 252 GVGLSARDMPEWKKNAYG-KAFTFGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLIL 310
G+G+ D+PEWKK+A+G ++G+++++SI EQR SLPI+KLK +L+QAVHDNQ+LI+
Sbjct: 551 GIGMMPNDIPEWKKHAFGGNKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIV 610
Query: 311 IGETGSGKTTQLAQYLAEAGYTTKGKIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAI 370
IGETGSGKTTQ+ QYLAEAGYT++GKIGCTQPRRVAA SVAKRV+EEFGC LG+EVGY I
Sbjct: 611 IGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTI 670
Query: 371 RFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVK 430
RFEDCT P+TVIKYMTDGMLLRE LID +L+QY++IMLDEAHERTI+TDVLFGLLK+ V+
Sbjct: 671 RFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQ 730
Query: 431 RRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQ 490
+R D++LIVTSATLDA +FS YF+ IF+IPGRT+PV+I Y+++ TDYLD++LITV+Q
Sbjct: 731 KRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQ 790
Query: 491 IHVDEPEGDILLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFE 550
IH+ EP GDIL+FLTGQEEID ACE L E++K+LG DVPEL++LPVYSALPSE+Q+RIF+
Sbjct: 791 IHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFD 850
Query: 551 PAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQ 610
PAPPG RKVV+ATNIAE SLTIDGI+YV+DPGF KQ VYN K +D LV+TPISQA A Q
Sbjct: 851 PAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQ 910
Query: 611 RAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFV 670
RAGRAGRTGPGKCYRLYTE AYR EM T +PEIQR NL T L++KAMGIN+LLSFDF+
Sbjct: 911 RAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFM 970
Query: 671 DPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEIL 730
D P + LI+AMEQLY+LGALD+EGLLT+LG++MAEFPL+P L KML+ SV LGCS+E+L
Sbjct: 971 DAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEML 1030
Query: 731 TIIAMIQTGHIFTRPRERQAKADEKRARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENF 790
TI++M+ ++F RP+++QA AD+K+A+F Q EGDHLTLLAVY +WK FS PWC ENF
Sbjct: 1031 TIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENF 1090
Query: 791 VNSRSLKK 798
+ +RSL++
Sbjct: 1091 IQARSLRR 1098
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 5/115 (4%)
Query: 9 ELTYLSLLSKICSELETHLGFIDKVLAEFISESGRNSETVEIFDDKLKEYGADLPNYLVR 68
+L YLSL+SK+C+EL+ HLG DK LAEF+ + T + F L + GA+ + L+
Sbjct: 24 KLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKNTTFDTFKASLVKNGAEFTDSLIS 83
Query: 69 TLFNVIHTILHPKPKLQSKKKSGRDRKTNYKAEFENDRERSGRYCKSNPPMLKDM 123
L +I T+ P +K + +D K E E RE C+ + P + M
Sbjct: 84 NLLRLIQTMRPP-----AKPSTSKDPVVKPKTEKEKLRELFPVLCQPDNPSARTM 133
>sp|Q09530|MOG5_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-5
OS=Caenorhabditis elegans GN=mog-5 PE=1 SV=1
Length = 1200
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/674 (61%), Positives = 526/674 (78%), Gaps = 10/674 (1%)
Query: 132 SGVLASNEYPRYDEEEEEGFASWAEGDEEELEIELSEDQPAFLQGQTRVSVDLSPVKVFK 191
+GVL + + P +DEE E D E++EIEL ED+P FL+G + ++ PVKV K
Sbjct: 379 AGVLTATDMPDFDEEMGVLRNYDDESDGEDIEIELVEDEPDFLRGYGKGGAEIEPVKVVK 438
Query: 192 NPEGSLSRTAALQSALTKERRE--VREQQLRTMIDSIPKDLNRPWEDPMPETGERHLA-- 247
NP+GSL++ A +Q AL+KER+E ++ Q+ R M N DPM +G + A
Sbjct: 439 NPDGSLAQAALMQGALSKERKETKIQAQRERDMDTQKGFSSNARILDPM--SGNQSTAWS 496
Query: 248 -QELRGVGLSARDMPEWKKN--AYGKAFTFGQRSKLSIQEQRRSLPIFKLKNELIQAVHD 304
E + ++MPEW K+ A GKA T+G+R+ LS+ EQR SLPIF LK L++A+ D
Sbjct: 497 ADESKDRNNKMKEMPEWLKHVTAGGKA-TYGRRTNLSMVEQRESLPIFALKKNLMEAMID 555
Query: 305 NQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCTQPRRVAATSVAKRVAEEFGCRLGE 364
NQ+L+++GETGSGKTTQ+ QY EAG +GKIGCTQPRRVAA SVAKRVAEE+GC+LG
Sbjct: 556 NQILVVVGETGSGKTTQMTQYAIEAGLGRRGKIGCTQPRRVAAMSVAKRVAEEYGCKLGT 615
Query: 365 EVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGL 424
+VGY IRFEDCT DT+IKYMTDGMLLRE LID +LS YS+IMLDEAHERTI+TDVLFGL
Sbjct: 616 DVGYTIRFEDCTSQDTIIKYMTDGMLLRECLIDPDLSGYSLIMLDEAHERTIHTDVLFGL 675
Query: 425 LKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPVDINYSRQEVTDYLDSA 484
LK ++RP+L+LI+TSATLD+ +FS YF IF+IPGRTFPV+I Y+R+ +DYL++A
Sbjct: 676 LKAAARKRPELKLIITSATLDSVKFSEYFLEAPIFTIPGRTFPVEILYTREPESDYLEAA 735
Query: 485 LITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPVYSALPSEI 544
ITV+QIH+ EP GD+L+FLTGQEEID +CE L E++K++G DVPEL++LPVY ALPSE+
Sbjct: 736 HITVMQIHLTEPPGDVLVFLTGQEEIDTSCEVLYERMKSMGPDVPELIILPVYGALPSEM 795
Query: 545 QSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPIS 604
Q+RIF+PAP G RKVV+ATNIAE SLTIDGIFYV+DPGF KQ +YNPK +DSLV+TPIS
Sbjct: 796 QTRIFDPAPAGKRKVVIATNIAETSLTIDGIFYVVDPGFVKQKIYNPKSGMDSLVVTPIS 855
Query: 605 QASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNL 664
QA+A QR+GRAGRTGPGKCYRLYTE A+R EM PT +PEIQR NL T L +KAMGINNL
Sbjct: 856 QAAAKQRSGRAGRTGPGKCYRLYTERAFRDEMLPTPVPEIQRTNLASTLLQLKAMGINNL 915
Query: 665 LSFDFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLG 724
+ FDF+D P ++I+A+ L++L ALD +GLLTKLG++MAEFPL+P LSK+L+ SVDLG
Sbjct: 916 IDFDFMDAPPLDSMITALNTLHTLSALDGDGLLTKLGRRMAEFPLEPSLSKLLIMSVDLG 975
Query: 725 CSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQPEGDHLTLLAVYEAWKAKNFSLP 784
CS+E+LTI+AM+ +IF RP+E+Q AD+K+A+F QPEGDHLTLLAVY +WK +FS P
Sbjct: 976 CSEEVLTIVAMLNVQNIFYRPKEKQDHADQKKAKFHQPEGDHLTLLAVYNSWKNHHFSQP 1035
Query: 785 WCGENFVNSRSLKK 798
WC ENF+ RS+K+
Sbjct: 1036 WCFENFIQVRSMKR 1049
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 10/103 (9%)
Query: 9 ELTYLSLLSKICSELETHLGFIDKVLAEFISESGRNSETVEIFDDKLKE------YGADL 62
+L +LSL+SK+ SE+E H G ++K +AEF+ + + T DKLK+ G
Sbjct: 3 QLEHLSLVSKVLSEVENHFGVVEKDVAEFVIHLAQENPTF----DKLKKALDSQGLGDQF 58
Query: 63 PNYLVRTLFNVIHTILHPKPKLQSKKKSGRDRKTNYKAEFEND 105
+ L T+ ++ ++ K K + S D K ++K +D
Sbjct: 59 DDSLTATILRIVQSMTAVKKKNKKGGDSKEDIKDSHKITLISD 101
>sp|O42643|PRP22_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase prp22
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp22 PE=1 SV=1
Length = 1168
Score = 845 bits (2183), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/681 (60%), Positives = 526/681 (77%), Gaps = 18/681 (2%)
Query: 130 GVSGVLASNEYPRYDEEEEEGF-----ASWAEGDEEELEIELSEDQPAFLQGQTRVSVDL 184
SG +++ + P E +GF A D+E++EIEL E++P FL GQT+VS+ L
Sbjct: 346 AASGAISATDIP----ELNDGFNTNNAAEINPEDDEDVEIELREEEPGFLAGQTKVSLKL 401
Query: 185 SPVKVFKNPEGSLSRTAALQSALTKERREVR--EQQLRTMIDSIPKDLNRPWEDPMPETG 242
SP+KV K P+GSLSR A L +RRE+R E +L++ + +DL+ W+D M
Sbjct: 402 SPIKVVKAPDGSLSRAAMQGQILANDRREIRQKEAKLKSEQEMEKQDLSLSWQDTMSNPQ 461
Query: 243 ERHLAQELRGVGLSARDM----PEWKKNAYGKAFTFGQRSKLSIQEQRRSLPIFKLKNEL 298
+R AQ++R +AR + P W++ ++G+R+ LS++EQR LP+FKL+ +
Sbjct: 462 DRKFAQDVRDS--AARQLTSETPSWRQATRNANISYGKRTTLSMKEQREGLPVFKLRKQF 519
Query: 299 IQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGK-IGCTQPRRVAATSVAKRVAEE 357
++AV NQ+L+L+GETGSGKTTQ+ QYLAE GYT+ K IGCTQPRRVAA SVAKRVAEE
Sbjct: 520 LEAVSKNQILVLLGETGSGKTTQITQYLAEEGYTSDSKMIGCTQPRRVAAMSVAKRVAEE 579
Query: 358 FGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTIN 417
GCR+GEEVGY IRFED T T IKYMTDGML RE L+D LS+YSVI+LDEAHERT+
Sbjct: 580 VGCRVGEEVGYTIRFEDKTSRMTQIKYMTDGMLQRECLVDPLLSKYSVIILDEAHERTVA 639
Query: 418 TDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPVDINYSRQEV 477
TDVLFGLLK V +RPDL+LIVTSATLDAERFS YF+ C IF+IPGR++PV+I Y++Q
Sbjct: 640 TDVLFGLLKGTVLKRPDLKLIVTSATLDAERFSSYFYKCPIFTIPGRSYPVEIMYTKQPE 699
Query: 478 TDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPVY 537
DYLD+AL+TV+QIH+ E GDIL+FLTGQEEID +CE L E+ K LG +PELV+LPVY
Sbjct: 700 ADYLDAALMTVMQIHLSEGPGDILVFLTGQEEIDTSCEILYERSKMLGDSIPELVILPVY 759
Query: 538 SALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDS 597
SALPSEIQSRIFEPAPPGGRKVV+ATNIAE SLTIDGI+YV+DPGF KQ+ ++PK +DS
Sbjct: 760 SALPSEIQSRIFEPAPPGGRKVVIATNIAETSLTIDGIYYVVDPGFVKQSCFDPKLGMDS 819
Query: 598 LVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMK 657
L++TPISQA A QR+GRAGRTGPGKCYRLYTESAYR+EM P+ IPEIQR NL HT L +K
Sbjct: 820 LIVTPISQAQARQRSGRAGRTGPGKCYRLYTESAYRNEMLPSPIPEIQRQNLSHTILMLK 879
Query: 658 AMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLSKML 717
AMGIN+LL+FDF+DPP Q +I+A++ LY+L ALD+EGLLT LG+KMA+FP++P LSK+L
Sbjct: 880 AMGINDLLNFDFMDPPPAQTMIAALQNLYALSALDDEGLLTPLGRKMADFPMEPQLSKVL 939
Query: 718 LASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQPEGDHLTLLAVYEAWK 777
+ SV+LGCS+E+L+IIAM+ +I++RPRE+Q +AD +RA+F PE DHLTLL VY WK
Sbjct: 940 ITSVELGCSEEMLSIIAMLSVPNIWSRPREKQQEADRQRAQFANPESDHLTLLNVYTTWK 999
Query: 778 AKNFSLPWCGENFVNSRSLKK 798
S WC E+++ +R +++
Sbjct: 1000 MNRCSDNWCYEHYIQARGMRR 1020
Score = 47.0 bits (110), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 5 NGIRELTYLSLLSKICSELETHLGFIDKVLAEFISESGRNSETVEIFDDKLKEYGADLPN 64
+ ++EL YLSL+SK+ SE+ H G D LAEFI S+ + F + + G + +
Sbjct: 2 DDLKELEYLSLVSKVASEIRNHTGIDDNTLAEFIINLHDQSKNYDEFKNNVLSCGGEFTD 61
Query: 65 YLVRTLFNVIHTILHPKPK 83
++ + +I I KPK
Sbjct: 62 SFLQNISRLIKEI---KPK 77
>sp|P24384|PRP22_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP22 PE=1 SV=1
Length = 1145
Score = 734 bits (1896), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/642 (54%), Positives = 478/642 (74%), Gaps = 9/642 (1%)
Query: 160 EELEIEL-SEDQPAFLQGQ-TRVSVDLSPVKVFKNPEGSLSRTAALQSALTKERREVREQ 217
+E+++EL ++D P FL+ Q + + K+ K P G ++R+A S ++ RE + +
Sbjct: 357 DEIDVELNTDDGPKFLKDQQVKGAKKYEMPKITKVPRGFMNRSAINGSNAIRDHREEKLR 416
Query: 218 QLRTMIDSIPKDLNRPWEDPMPETGE-RHLAQELRGVGLSARDMPEWKKNAYGKAFTFGQ 276
+ R + I K + ++DP + R+ Q L+ + + EW+KN ++ ++G+
Sbjct: 417 KKREIEQQIRK--QQSFDDPTKNKKDSRNEIQMLKNQLI----VTEWEKNRMNESISYGK 470
Query: 277 RSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGK 336
R+ L I QR++LP++ +++ELIQAV DNQ L+++GETGSGKTTQ+ QYL E G++ G
Sbjct: 471 RTSLPISAQRQTLPVYAMRSELIQAVRDNQFLVIVGETGSGKTTQITQYLDEEGFSNYGM 530
Query: 337 IGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILI 396
IGCTQPRRVAA SVAKRVAEE GC++G +VGY IRFED TGPDT IKYMTDGML RE L+
Sbjct: 531 IGCTQPRRVAAVSVAKRVAEEVGCKVGHDVGYTIRFEDVTGPDTRIKYMTDGMLQREALL 590
Query: 397 DENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNC 456
D +S+YSVIMLDEAHERT+ TDVLF LLK+ +RP+L++IVTSATL++ +FS YF NC
Sbjct: 591 DPEMSKYSVIMLDEAHERTVATDVLFALLKKAAIKRPELKVIVTSATLNSAKFSEYFLNC 650
Query: 457 NIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACES 516
I +IPG+TFPV++ YS+ DY+++AL V+ IH++E GDIL+FLTGQEEID CE
Sbjct: 651 PIINIPGKTFPVEVLYSQTPQMDYIEAALDCVIDIHINEGPGDILVFLTGQEEIDSCCEI 710
Query: 517 LCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIF 576
L +++K LG + EL++LPVYSALPSEIQS+IFEP P G RKVV ATNIAE S+TIDGI+
Sbjct: 711 LYDRVKTLGDSIGELLILPVYSALPSEIQSKIFEPTPKGSRKVVFATNIAETSITIDGIY 770
Query: 577 YVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEM 636
YV+DPGFAK N+YN + ++ L+++PISQA A QR GRAGRTGPGKCYRLYTESA+ +EM
Sbjct: 771 YVVDPGFAKINIYNARAGIEQLIVSPISQAQANQRKGRAGRTGPGKCYRLYTESAFYNEM 830
Query: 637 SPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGL 696
T+PEIQR NL HT L +KAMGIN+LL FDF+DPP +++A+ +LY L +LD+EG
Sbjct: 831 LENTVPEIQRQNLSHTILMLKAMGINDLLKFDFMDPPPKNLMLNALTELYHLQSLDDEGK 890
Query: 697 LTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKR 756
LT LGK+M+ FP+DP LS+ LL+SVD CSDEI+TII+M+ ++F RP++RQ +AD K+
Sbjct: 891 LTNLGKEMSLFPMDPTLSRSLLSSVDNQCSDEIVTIISMLSVQNVFYRPKDRQLEADSKK 950
Query: 757 ARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
A+F P GDHLTLL VY W+ N+S +C NF++ R LK+
Sbjct: 951 AKFHHPYGDHLTLLNVYTRWQQANYSEQYCKTNFLHFRHLKR 992
>sp|Q54MH3|DHX16_DICDI Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Dictyostelium discoideum GN=dhx16 PE=3 SV=1
Length = 1106
Score = 673 bits (1736), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 309/523 (59%), Positives = 411/523 (78%), Gaps = 1/523 (0%)
Query: 277 RSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGK 336
++K++IQE R+SLP++ + +LI AV + QVLI++GETGSGKTTQ+ QYL EAG++ GK
Sbjct: 455 QAKMTIQEVRKSLPVYPYREQLIDAVREYQVLIIVGETGSGKTTQIPQYLHEAGFSKTGK 514
Query: 337 IGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILI 396
IGCTQPRRVAA SVA RVAEE GC+LG EVGY+IRFEDCT TV++YMTDGML+RE L
Sbjct: 515 IGCTQPRRVAAMSVAARVAEEVGCKLGNEVGYSIRFEDCTSQKTVLQYMTDGMLVREFLT 574
Query: 397 DENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNC 456
+L+ YSV+++DEAHERT++TD+LFGLLK + + RPDL+L+++SAT+DAERFS YF
Sbjct: 575 APDLASYSVLIIDEAHERTLHTDILFGLLKDITRFRPDLKLLISSATMDAERFSDYFDGA 634
Query: 457 NIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACES 516
F+IPGR + V +Y++ DYLD+A++TVLQIH+ EP GDIL+FLTGQEE+D A E
Sbjct: 635 PTFNIPGRKYEVTTHYTQAPEADYLDAAVVTVLQIHITEPLGDILVFLTGQEEVDQAAEM 694
Query: 517 LCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIF 576
L + + LG + EL++ +YS LP+++Q++IFEP PP RKVV+ATNIAE SLTIDGI
Sbjct: 695 LQTRTRGLGTKIKELIITRIYSTLPTDLQAKIFEPTPPNARKVVLATNIAETSLTIDGII 754
Query: 577 YVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEM 636
YVIDPGF KQ ++NP+ ++SLVITP+S+ASA QR GRAGR PGKC+RL+T A+ +E+
Sbjct: 755 YVIDPGFCKQKMFNPRTGMESLVITPVSRASANQRKGRAGRVAPGKCFRLFTAWAFDNEL 814
Query: 637 SPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGL 696
TIPEIQR NL + L +K+MGIN+L++FDF+DPP Q LI+A+EQLY+LGAL++ G
Sbjct: 815 EENTIPEIQRTNLGNVVLLLKSMGINDLMNFDFMDPPPAQTLIAALEQLYALGALNDRGQ 874
Query: 697 LTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGH-IFTRPRERQAKADEK 755
LTKLG+KMAEFP+DP LSKM++AS CS+EILTI AM+ G+ IF RP+++ AD
Sbjct: 875 LTKLGRKMAEFPVDPQLSKMIIASEKYKCSEEILTICAMLSVGNTIFYRPKDKAFAADAA 934
Query: 756 RARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
R FF P+GDHLTL+ V+ W+ +++ WC ENF+ RS+K+
Sbjct: 935 RKLFFHPQGDHLTLMNVFNQWRESGYAVQWCFENFIQHRSMKR 977
>sp|Q767K6|DHX16_PIG Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Sus scrofa GN=DHX16 PE=3 SV=1
Length = 1045
Score = 649 bits (1673), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 306/522 (58%), Positives = 396/522 (75%), Gaps = 2/522 (0%)
Query: 279 KLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKG-KI 337
K SIQ RRSLP+F + EL+ AV ++Q+LI+ GETGSGKTTQ+ QYL E GYT KG KI
Sbjct: 393 KESIQAVRRSLPVFPFREELLAAVANHQILIIEGETGSGKTTQIPQYLFEEGYTQKGMKI 452
Query: 338 GCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILID 397
CTQPRRVAA SVA RVA E G +LG EVGY+IRFEDCT TV++YMTDGMLLRE L +
Sbjct: 453 ACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSE 512
Query: 398 ENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCN 457
+L+ YSV+M+DEAHERT++TD+LFGL+K + + RP+L+++V SATLD RFS +F +
Sbjct: 513 PDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSTFFDDAP 572
Query: 458 IFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESL 517
+F IPGR FPVDI Y++ DYL++ +++VLQIHV +P GDIL+FLTGQEEI+ ACE L
Sbjct: 573 VFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEML 632
Query: 518 CEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFY 577
++ + LG + EL+VLP+Y+ LPS++Q+RIF+P PPG RKVVVATNIAE SLTI+GI Y
Sbjct: 633 QDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIY 692
Query: 578 VIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMS 637
V+DPGF KQ YNP+ ++SL +TP S+ASA QRAGRAGR GKC+RLYT AY+ E+
Sbjct: 693 VLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELE 752
Query: 638 PTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLL 697
TT+PEIQR +L + L +K++GI++L+ FDF+DPP + L+ A+EQLY+LGAL+ G L
Sbjct: 753 ETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLGEL 812
Query: 698 TKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGH-IFTRPRERQAKADEKR 756
T G+KMAE P+DP LSKM+LAS CS+EILT+ AM+ + IF RP+++ AD R
Sbjct: 813 TTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNAR 872
Query: 757 ARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
FF P GDHL LL VY W +S WC ENFV RS+++
Sbjct: 873 VNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRR 914
>sp|Q7YR39|DHX16_PANTR Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Pan troglodytes GN=DHX16 PE=3 SV=1
Length = 1044
Score = 648 bits (1672), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 305/524 (58%), Positives = 397/524 (75%), Gaps = 2/524 (0%)
Query: 277 RSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKG- 335
+ K SIQ RRSLP+F + EL+ A+ ++QVLI+ GETGSGKTTQ+ QYL E GYT KG
Sbjct: 390 QQKESIQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGM 449
Query: 336 KIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREIL 395
KI CTQPRRVAA SVA RVA E G +LG EVGY+IRFEDCT TV++YMTDGMLLRE L
Sbjct: 450 KIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFL 509
Query: 396 IDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFN 455
+ +L+ YSV+M+DEAHERT++TD+LFGL+K + + RP+L+++V SAT+D RFS +F +
Sbjct: 510 SEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDD 569
Query: 456 CNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACE 515
+F IPGR FPVDI Y++ DYL++ +++VLQIHV +P GDIL+FLTGQEEI+ ACE
Sbjct: 570 APVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACE 629
Query: 516 SLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGI 575
L ++ + LG + EL+VLP+Y+ LPS++Q+RIF+P PPG RKVVVATNIAE SLTI+GI
Sbjct: 630 MLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGI 689
Query: 576 FYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSE 635
YV+DPGF KQ YNP+ ++SL +TP S+ASA QRAGRAGR GKC+RLYT AY+ E
Sbjct: 690 IYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHE 749
Query: 636 MSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEG 695
+ TT+PEIQR +L + L +K++GI++L+ FDF+DPP + L+ A+EQLY+LGAL+ G
Sbjct: 750 LEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLG 809
Query: 696 LLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGH-IFTRPRERQAKADE 754
LT G+KMAE P+DP LSKM+LAS CS+EILT+ AM+ + IF RP+++ AD
Sbjct: 810 ELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADN 869
Query: 755 KRARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
R FF P GDHL LL VY W +S WC ENFV RS+++
Sbjct: 870 ARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRR 913
>sp|O60231|DHX16_HUMAN Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Homo sapiens GN=DHX16 PE=1 SV=2
Length = 1041
Score = 648 bits (1671), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 305/524 (58%), Positives = 397/524 (75%), Gaps = 2/524 (0%)
Query: 277 RSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKG- 335
+ K SIQ RRSLP+F + EL+ A+ ++QVLI+ GETGSGKTTQ+ QYL E GYT KG
Sbjct: 387 QQKESIQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGM 446
Query: 336 KIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREIL 395
KI CTQPRRVAA SVA RVA E G +LG EVGY+IRFEDCT TV++YMTDGMLLRE L
Sbjct: 447 KIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFL 506
Query: 396 IDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFN 455
+ +L+ YSV+M+DEAHERT++TD+LFGL+K + + RP+L+++V SAT+D RFS +F +
Sbjct: 507 SEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDD 566
Query: 456 CNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACE 515
+F IPGR FPVDI Y++ DYL++ +++VLQIHV +P GDIL+FLTGQEEI+ ACE
Sbjct: 567 APVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACE 626
Query: 516 SLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGI 575
L ++ + LG + EL+VLP+Y+ LPS++Q+RIF+P PPG RKVVVATNIAE SLTI+GI
Sbjct: 627 MLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGI 686
Query: 576 FYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSE 635
YV+DPGF KQ YNP+ ++SL +TP S+ASA QRAGRAGR GKC+RLYT AY+ E
Sbjct: 687 IYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHE 746
Query: 636 MSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEG 695
+ TT+PEIQR +L + L +K++GI++L+ FDF+DPP + L+ A+EQLY+LGAL+ G
Sbjct: 747 LEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLG 806
Query: 696 LLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGH-IFTRPRERQAKADE 754
LT G+KMAE P+DP LSKM+LAS CS+EILT+ AM+ + IF RP+++ AD
Sbjct: 807 ELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADN 866
Query: 755 KRARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
R FF P GDHL LL VY W +S WC ENFV RS+++
Sbjct: 867 ARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRR 910
>sp|O45244|DHX16_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-4
OS=Caenorhabditis elegans GN=mog-4 PE=1 SV=2
Length = 1008
Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 301/529 (56%), Positives = 406/529 (76%), Gaps = 3/529 (0%)
Query: 273 TFGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYT 332
T ++ K+SI+E R+SLP++ ++ I+AV ++QVLI+ GETGSGKTTQL QYL EAG+
Sbjct: 348 TEAEKKKMSIEETRKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFC 407
Query: 333 TKGK-IGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLL 391
GK IGCTQPRRVAA SVA RVA+E GC+LG +VGY+IRFEDCT TV+KYMTDGMLL
Sbjct: 408 EGGKRIGCTQPRRVAAMSVAARVADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLL 467
Query: 392 REILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSG 451
RE L + +L+ YSV+M+DEAHERT++TD+LFGL+K + + R DL+L+++SATLDAE+FS
Sbjct: 468 REFLNEPDLASYSVMMIDEAHERTLHTDILFGLVKDIARFRKDLKLLISSATLDAEKFSS 527
Query: 452 YFFNCNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEP-EGDILLFLTGQEEI 510
+F + IF IPGR FPVDI Y++ DY+D+A++T++QIH+ +P GDIL+FLTGQEEI
Sbjct: 528 FFDDAPIFRIPGRRFPVDIYYTQAPEADYVDAAIVTIMQIHLTQPLPGDILVFLTGQEEI 587
Query: 511 DFACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASL 570
+ E+L E+ KALG + EL+ LPVY+ LPS++Q++IFEP P RKVV+ATNIAE S+
Sbjct: 588 ETVQEALMERSKALGSKIKELIPLPVYANLPSDLQAKIFEPTPKDARKVVLATNIAETSV 647
Query: 571 TIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTES 630
TIDGI YVIDPGF+KQN ++ + ++ L + IS+A+A QRAGRAGRTGPGKC+RLYT
Sbjct: 648 TIDGINYVIDPGFSKQNSFDARSGVEHLHVVTISKAAANQRAGRAGRTGPGKCFRLYTAW 707
Query: 631 AYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGA 690
AY+ E+ IPEIQR NL + L +K++GI++L+ FDF+DPP + L+ A+EQLY+LGA
Sbjct: 708 AYKHELEEQPIPEIQRTNLGNVVLMLKSLGIHDLVHFDFLDPPPQETLVIALEQLYALGA 767
Query: 691 LDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQ-TGHIFTRPRERQ 749
L+ G LTKLG++MAEFP DP +SKM++AS CS+EI+TI AM+ +F RP+ +
Sbjct: 768 LNHRGELTKLGRRMAEFPCDPCMSKMIIASEKYECSEEIVTIAAMLSCNAAVFYRPKAQV 827
Query: 750 AKADEKRARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
AD R F+ P GDH+TL+ VY W+ +FS WC EN+V R++K+
Sbjct: 828 IHADSARKGFWSPAGDHITLMNVYNKWQESSFSQRWCVENYVQHRTMKR 876
>sp|P34498|MOG1_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1
OS=Caenorhabditis elegans GN=mog-1 PE=1 SV=2
Length = 1131
Score = 638 bits (1645), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/656 (47%), Positives = 444/656 (67%), Gaps = 25/656 (3%)
Query: 156 EGDEEELEIELSEDQPAFLQGQTRVSVDLSPVKVFKNPEGSLSRTAALQSALTKERREVR 215
E DE + I + P FL G+ + P+ + ++ +AA S ++RREV
Sbjct: 309 ETDENRVTILVQNIVPPFLDGRIVFTKQAQPIIPVVDTTCDMAVSAARGSVAVRKRREVE 368
Query: 216 EQQLRTMIDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSARDMPEWKKNAYGKAFTFG 275
+++ K ++ WE + G +E + D + Y ++ F
Sbjct: 369 DRK---------KAQDKHWELAGSKLGNLMGVKEKKD---ETADPEDDDSGNYKESHQFA 416
Query: 276 QRSK-----------LSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQ 324
K SI++QR LP+F + +++ + +N V+I++GETGSGKTTQLAQ
Sbjct: 417 SHMKDNEAVSDFAMEKSIKQQREYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQ 476
Query: 325 YLAEAGYTTKGKIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKY 384
YL E G+ G IGCTQPRRVAA SVA+RVA+E G LG++VGYAIRFEDCT T+IKY
Sbjct: 477 YLLEDGFGDSGLIGCTQPRRVAAMSVARRVADEMGVDLGQDVGYAIRFEDCTSEKTIIKY 536
Query: 385 MTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATL 444
MTDG+LLRE L D +L QYS I++DEAHER++NTDVLFGLL++++ +R DL+LIVTSAT+
Sbjct: 537 MTDGILLRECLGDGSLDQYSAIIMDEAHERSLNTDVLFGLLREVIAKRADLKLIVTSATM 596
Query: 445 DAERFSGYFF-NCNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLF 503
DA++F+ +F NC F+IPGRTFPV++ ++R V DY+D+A+ + IH+ +GDIL+F
Sbjct: 597 DADKFADFFGGNCPTFTIPGRTFPVELFHARTPVEDYVDAAVKQAVTIHLGGMDGDILIF 656
Query: 504 LTGQEEIDFACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVAT 563
+ GQE+I+ CE + EK+ L + P L VLP+YS LPS++Q++IF+ AP G RK +VAT
Sbjct: 657 MPGQEDIECTCEMIKEKLGEL-DEAPPLAVLPIYSQLPSDLQAKIFQRAPGGMRKAIVAT 715
Query: 564 NIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKC 623
NIAE SLT+DGI +VIDPGF K VYNP+ +D+L I P+SQASA QR GRAGRTGPG+C
Sbjct: 716 NIAETSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQASANQRTGRAGRTGPGQC 775
Query: 624 YRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAME 683
YRLYTE ++ E+ +T+PEIQR NL + L +K++G+++LL F F+D P ++++M
Sbjct: 776 YRLYTERQFKDELLKSTVPEIQRTNLANVVLLLKSLGVDDLLKFHFMDAPPQDNMLNSMY 835
Query: 684 QLYSLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFT 743
QL++LGALD G LT +G+KM EFPLDP LSKML+ S ++GCSDE+LTI++M+ IF
Sbjct: 836 QLWTLGALDNTGQLTPMGRKMVEFPLDPTLSKMLIMSAEMGCSDEVLTIVSMLSVPAIFF 895
Query: 744 RPRERQAKADEKRARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKKT 799
RP+ R+ +AD K+ +F PE DHLT L VY W+ +S WC +N+++ ++LKK
Sbjct: 896 RPKGREEEADAKKEKFQVPESDHLTFLNVYIQWRTHKYSAKWCADNYLHVKALKKV 951
>sp|Q92620|PRP16_HUMAN Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 OS=Homo
sapiens GN=DHX38 PE=1 SV=2
Length = 1227
Score = 634 bits (1636), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 295/520 (56%), Positives = 397/520 (76%), Gaps = 1/520 (0%)
Query: 279 KLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIG 338
K SI EQR+ LPIF ++ EL+ + DN ++I++GETGSGKTTQL QYL E GYT G IG
Sbjct: 522 KKSILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIG 581
Query: 339 CTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDE 398
CTQPRRVAA SVAKRV+EE G LGEEVGYAIRFEDCT +T+IKYMTDG+LLRE L +
Sbjct: 582 CTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLREA 641
Query: 399 NLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNI 458
+L YS I++DEAHER++NTDVLFGLL+++V RR DL+LIVTSAT+DAE+F+ +F N I
Sbjct: 642 DLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFAAFFGNVPI 701
Query: 459 FSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLC 518
F IPGRTFPVDI +S+ DY+++A+ LQ+H+ GDIL+F+ GQE+I+ + +
Sbjct: 702 FHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIV 761
Query: 519 EKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYV 578
E ++ L ++ P L VLP+YS LPS++Q++IF+ AP G RK +VATNIAE SLT+DGI +V
Sbjct: 762 EHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFV 820
Query: 579 IDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSP 638
ID G+ K V+NP+ +D+L I PISQA+A QR+GRAGRTGPG+C+RLYT+SAY++E+
Sbjct: 821 IDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLT 880
Query: 639 TTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLT 698
TT+PEIQR NL + L +K++G+ +LL F F+DPP ++++M QL+ LGALD G LT
Sbjct: 881 TTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLT 940
Query: 699 KLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRAR 758
G+ M EFPLDP LSKML+ S D+GCS EIL I++M+ IF RP+ R+ ++D+ R +
Sbjct: 941 STGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREK 1000
Query: 759 FFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
F PE DHLT L VY WK N+S WC ++F+++++++K
Sbjct: 1001 FAVPESDHLTYLNVYLQWKNNNYSTIWCNDHFIHAKAMRK 1040
>sp|Q17R09|PRP16_BOVIN Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 OS=Bos
taurus GN=DHX38 PE=2 SV=1
Length = 1227
Score = 632 bits (1630), Expect = e-180, Method: Compositional matrix adjust.
Identities = 316/639 (49%), Positives = 439/639 (68%), Gaps = 23/639 (3%)
Query: 171 PAFLQGQTRVSVDLSPVKVFKNPEGSLSRTAALQSALTKERREVREQQLRTMIDSIPKDL 230
P FL G+ + PV K+ L+ A S ++ RE +E++ K
Sbjct: 414 PPFLDGRIVFTKQPEPVIPVKDATSDLAIIARKGSQTVRKHREQKERK---------KAQ 464
Query: 231 NRPWE-------DPM----PETGERHLAQELRGVGLSARDMPEWKKNAYGKAFTFGQRSK 279
++ WE D M E ++ L ++ + + + + K + F + K
Sbjct: 465 HKHWELAGTKLGDIMGVKKEEEPDKSLTEDGKVDYRTEQKFADHMKKKSEASSEFAK--K 522
Query: 280 LSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGC 339
SI EQR+ LPIF ++ EL+ + DN ++I++GETGSGKTTQL QYL E GYT G IGC
Sbjct: 523 KSILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGC 582
Query: 340 TQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDEN 399
TQPRRVAA SVAKRV+EE G LGEEVGYAIRFEDCT T+IKYMTDG+LLRE L + +
Sbjct: 583 TQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLRESLREAD 642
Query: 400 LSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIF 459
L YS I++DEAHER++NTDVLFGLL+++V RR DL+LIVTSAT+DAE+F+ +F N IF
Sbjct: 643 LDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFASFFGNVPIF 702
Query: 460 SIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCE 519
IPGRTFPVDI +S+ DY+++A+ LQ+H+ GDIL+F+ GQE+I+ + + E
Sbjct: 703 HIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVE 762
Query: 520 KIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVI 579
++ L ++ P L VLP+YS LPS++Q++IF+ AP G RK +VATNIAE SLT+DGI +VI
Sbjct: 763 HLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVI 821
Query: 580 DPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPT 639
D G+ K V+NP+ +D+L I PISQA+A QR+GRAGRTGPG+C+RLYT+SAY++E+ T
Sbjct: 822 DSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTT 881
Query: 640 TIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLTK 699
T+PEIQR NL + L +K++G+ +LL F F+DPP ++++M QL+ LGALD G LT
Sbjct: 882 TVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTS 941
Query: 700 LGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARF 759
G+ M EFPLDP LSKML+ S D+GCS EIL I++M+ IF RP+ R+ ++D+ R +F
Sbjct: 942 TGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREKF 1001
Query: 760 FQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
PE DHL+ L VY WK N+S WC ++F+++++++K
Sbjct: 1002 AVPESDHLSYLNVYLQWKNNNYSTIWCNDHFIHAKAMRK 1040
>sp|Q10752|CDC28_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein
cdc28 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=cdc28 PE=3 SV=2
Length = 1055
Score = 630 bits (1624), Expect = e-179, Method: Compositional matrix adjust.
Identities = 290/519 (55%), Positives = 400/519 (77%), Gaps = 4/519 (0%)
Query: 281 SIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKG--KIG 338
S++ R+SLP+++ K++L++A+++ QVL+++ ETGSGKTTQL Q+L EAGYT KG KI
Sbjct: 410 SLESSRKSLPVYQYKDDLLKAINEYQVLLIVAETGSGKTTQLPQFLHEAGYT-KGNKKIC 468
Query: 339 CTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDE 398
CTQPRRVAA SVA RVA+E RLG+EVGY+IRFE+ T TVIKY+TDGMLLRE L +
Sbjct: 469 CTQPRRVAAMSVAARVAKEMDVRLGQEVGYSIRFENATSEKTVIKYLTDGMLLREFLTEP 528
Query: 399 NLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNI 458
+L+ YSVI++DEAHERT++TD+LFGL+K + + RPDL+++++SAT+DAE+FS YF +
Sbjct: 529 DLASYSVIIIDEAHERTLHTDILFGLVKDIARFRPDLKVLISSATIDAEKFSAYFDEAPV 588
Query: 459 FSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLC 518
F +PGR +PVDI Y+ Q +Y+ +A+ T+LQIH +P GDIL+FLTGQ+EI+ E++
Sbjct: 589 FYVPGRRYPVDIYYTPQPEANYIQAAITTILQIHTTQPAGDILVFLTGQDEIELMSENMQ 648
Query: 519 EKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYV 578
E + LGK +PE+++ P+Y+ LPSE+Q++IF+P PPG RKVV+ATNIAE S+TIDG+ +V
Sbjct: 649 ELCRILGKRIPEIILCPIYANLPSELQAKIFDPTPPGARKVVLATNIAETSITIDGVNFV 708
Query: 579 IDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSP 638
ID GF KQN+YNP+ ++SLV P S+ASA QRAGRAGR GPGKC+RLYT Y +E+
Sbjct: 709 IDSGFVKQNMYNPRTGMESLVSVPCSRASADQRAGRAGRVGPGKCFRLYTRRTYNNELDM 768
Query: 639 TTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLT 698
T PEIQR NL + L +K++GINNLL FDF+D P P+ L+ ++E LY+LGAL+ G LT
Sbjct: 769 VTSPEIQRTNLTNIVLLLKSLGINNLLDFDFMDAPPPETLMRSLELLYALGALNNRGELT 828
Query: 699 KLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMI-QTGHIFTRPRERQAKADEKRA 757
KLG++MAEFP DP LSK L+AS GC +E+L+I++M+ + +F RP+++ +AD+ RA
Sbjct: 829 KLGRQMAEFPTDPMLSKSLIASSKYGCVEEVLSIVSMLGEASSLFYRPKDKIMEADKARA 888
Query: 758 RFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSL 796
F QP GDHLTLL ++ W +FS W ENF+ +SL
Sbjct: 889 NFTQPGGDHLTLLHIWNEWVDTDFSYNWARENFLQYKSL 927
>sp|Q9P774|PRP16_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase prp16
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp16 PE=3 SV=2
Length = 1173
Score = 624 bits (1609), Expect = e-178, Method: Compositional matrix adjust.
Identities = 285/518 (55%), Positives = 396/518 (76%), Gaps = 1/518 (0%)
Query: 281 SIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCT 340
S +EQR LP F ++ +L+ + DNQVLI++GETGSGKTTQLAQ+L E GY G IGCT
Sbjct: 484 SYREQREFLPAFAVREQLLSVIRDNQVLIVVGETGSGKTTQLAQFLYEDGYHRNGMIGCT 543
Query: 341 QPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENL 400
QPRRVAA SVAKRV+EE G RLG VGY+IRFED TGPDTVIKYMTDG+LLRE L+ NL
Sbjct: 544 QPRRVAAMSVAKRVSEEMGVRLGSTVGYSIRFEDVTGPDTVIKYMTDGVLLRESLMQNNL 603
Query: 401 SQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFS 460
+YSVI++DEAHER++NTD+L GLLK+++ RR D++L+VTSAT+++++FS +F F+
Sbjct: 604 EKYSVIIMDEAHERSLNTDILMGLLKKVLSRRRDIKLLVTSATMNSQKFSDFFGGAPQFT 663
Query: 461 IPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEK 520
IPGRT+PVDI +++ +DY+++A+ VLQIH+ +P GDIL+F+TGQE+I+ CE + ++
Sbjct: 664 IPGRTYPVDIMFAKAPCSDYVEAAVRQVLQIHLSQPAGDILVFMTGQEDIEATCEIIADR 723
Query: 521 IKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVID 580
+ L D P L +LP+YS +P+++Q++IF+ A PG RKVVVATNIAE SLT+ GI YV+D
Sbjct: 724 LNQL-HDAPRLSILPIYSQMPADLQAKIFDSAEPGVRKVVVATNIAETSLTVHGISYVVD 782
Query: 581 PGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTT 640
G+ K +YN K +D+L +TPISQA+A QRAGRAGRTGPG YRLYTE AY EM TT
Sbjct: 783 TGYCKLKMYNSKLGIDTLQVTPISQANANQRAGRAGRTGPGIAYRLYTEMAYIREMFETT 842
Query: 641 IPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLTKL 700
+PEIQR NL +T L +K++G+ + FDF+D P L++++ +L++LGALD G LT L
Sbjct: 843 LPEIQRTNLSNTVLILKSLGVEEISDFDFMDRPPNDTLMASLYELWTLGALDNFGKLTTL 902
Query: 701 GKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFF 760
GKKM+ FP+DP LSK+++ + D C++EI+TI++M+ +F RP+ER ++D R +F
Sbjct: 903 GKKMSLFPMDPSLSKLIIIAEDYKCTEEIITIVSMLSVPSVFYRPKERAEESDAAREKFN 962
Query: 761 QPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
PE DHL LL +Y+ W+ +S WC ++F++S++LK+
Sbjct: 963 VPESDHLMLLNIYQHWQRNGYSNSWCSKHFLHSKTLKR 1000
>sp|O22899|DHX15_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase
OS=Arabidopsis thaliana GN=At2g47250 PE=2 SV=1
Length = 729
Score = 621 bits (1602), Expect = e-177, Method: Compositional matrix adjust.
Identities = 299/549 (54%), Positives = 406/549 (73%), Gaps = 20/549 (3%)
Query: 262 EWKKNAYGKAFTFGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQ 321
+W AY + + I E+RR LP++ K++ + ++ NQ LIL+GETGSGKTTQ
Sbjct: 45 KWNGKAYSQRY-------FEILEKRRDLPVWLQKDDFLNTLNSNQTLILVGETGSGKTTQ 97
Query: 322 LAQYLAEA---GYTTKGK---IGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDC 375
+ Q++ +A + KG+ +GCTQPRRVAA SV++RVA+E +GEEVGY+IRFEDC
Sbjct: 98 IPQFVLDAVVADNSDKGRKWLVGCTQPRRVAAMSVSRRVADEMDVSIGEEVGYSIRFEDC 157
Query: 376 TGPDTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDL 435
T T++KY+TDGMLLRE + D L +Y VI+LDEAHERT+ TDVLFGLLK++++ RPDL
Sbjct: 158 TSSRTMLKYLTDGMLLREAMADPLLERYKVIILDEAHERTLATDVLFGLLKEVLRNRPDL 217
Query: 436 RLIVTSATLDAERFSGYFFNCNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDE 495
+L+V SATL+AE+F YF + +PGR PV+I Y+++ DYL++A+ TV+QIH+ E
Sbjct: 218 KLVVMSATLEAEKFQEYFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCE 277
Query: 496 PEGDILLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAP-- 553
P GDIL+FLTG+EEI+ AC + +++ LG V + V+P+YS LP +Q +IF+PAP
Sbjct: 278 PPGDILVFLTGEEEIEDACRKINKEVSNLGDQVGPVKVVPLYSTLPPAMQQKIFDPAPVP 337
Query: 554 -----PGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASA 608
P GRK+VV+TNIAE SLTIDGI YVIDPGFAKQ VYNP+ R++SL+++PIS+ASA
Sbjct: 338 LTEGGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASA 397
Query: 609 LQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFD 668
QR+GRAGRT PGKC+RLYTE ++ +++ P T PEI R NL +T LT+K +GI++L+ FD
Sbjct: 398 HQRSGRAGRTRPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFD 457
Query: 669 FVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDE 728
F+DPP+P+ L+ A+E L LGALD+EG LTK G+ M+EFPLDP +SKML+ S + CS+E
Sbjct: 458 FMDPPAPETLMRALEVLNYLGALDDEGNLTKTGEIMSEFPLDPQMSKMLIVSPEFNCSNE 517
Query: 729 ILTIIAMIQTGHIFTRPRERQAKADEKRARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGE 788
IL++ AM+ + F RPRE Q ADE +ARF +GDHLTLL VY A+K N WC E
Sbjct: 518 ILSVSAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPNWCFE 577
Query: 789 NFVNSRSLK 797
NFVN+R++K
Sbjct: 578 NFVNNRAMK 586
>sp|O42945|DHX15_SCHPO Probable pre-mRNA-splicing factor ATP-dependent RNA helicase prp43
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp43 PE=3 SV=1
Length = 735
Score = 596 bits (1537), Expect = e-169, Method: Compositional matrix adjust.
Identities = 283/526 (53%), Positives = 388/526 (73%), Gaps = 9/526 (1%)
Query: 280 LSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLA--EAGYTTKGKI 337
I E RR LP+++ + E ++ H+NQ+++ +GETGSGKTTQ+ Q++ E + T +I
Sbjct: 66 FKILETRRELPVYQQREEFLKIYHENQIIVFVGETGSGKTTQIPQFVLYDELPHLTNTQI 125
Query: 338 GCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILID 397
CTQPRRVAA SVAKRVA+E LGEEVGY IRFEDC+GP+T++KYMTDGMLLRE + D
Sbjct: 126 ACTQPRRVAAMSVAKRVADEMDVDLGEEVGYNIRFEDCSGPNTLLKYMTDGMLLREAMTD 185
Query: 398 ENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCN 457
LS+YS I+LDEAHERT+ TD+L GL+K+L RRPDL++IV SATLDA++F YFF+
Sbjct: 186 HMLSRYSCIILDEAHERTLATDILMGLMKRLATRRPDLKIIVMSATLDAKKFQKYFFDAP 245
Query: 458 IFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESL 517
+ ++PGRT+PV+I Y+++ DYL++AL TVLQIHV+E GDIL+FLTG+EEI+ AC +
Sbjct: 246 LLAVPGRTYPVEIYYTQEPERDYLEAALRTVLQIHVEEGPGDILVFLTGEEEIEDACRKI 305
Query: 518 CEKIKALGKD--VPELVVLPVYSALPSEIQSRIFEPAPPG-----GRKVVVATNIAEASL 570
+ L ++ L V P+Y +LP Q RIFEP P GRKVV++TNIAE SL
Sbjct: 306 TLEADDLVREGAAGPLKVYPLYGSLPPNQQQRIFEPTPEDTKSGYGRKVVISTNIAETSL 365
Query: 571 TIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTES 630
TIDGI YV+DPGF+KQ +YNP+ R++SL+++PIS+ASA QRAGRAGRT PGKC+RLYTE
Sbjct: 366 TIDGIVYVVDPGFSKQKIYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEE 425
Query: 631 AYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGA 690
A+R E+ T PEI R NL T L +K +GI++L+ FD++DPP+P+ ++ A+E+L L
Sbjct: 426 AFRKELIEQTYPEILRSNLSSTVLELKKLGIDDLVHFDYMDPPAPETMMRALEELNYLNC 485
Query: 691 LDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQA 750
LD+ G LT LG+K +EFPLDP L+ ML+ S + CS+E+L++ A++ ++F RP +
Sbjct: 486 LDDNGDLTPLGRKASEFPLDPNLAVMLIRSPEFYCSNEVLSLTALLSVPNVFVRPNSARK 545
Query: 751 KADEKRARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSL 796
ADE R +F P+GDHLTLL VY A+K+ + WC +F++ R+L
Sbjct: 546 LADEMRQQFTHPDGDHLTLLNVYHAYKSGEGTADWCWNHFLSHRAL 591
>sp|Q5RAZ4|DHX15_PONAB Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Pongo abelii GN=DHX15 PE=2 SV=2
Length = 795
Score = 592 bits (1527), Expect = e-168, Method: Compositional matrix adjust.
Identities = 289/525 (55%), Positives = 387/525 (73%), Gaps = 10/525 (1%)
Query: 282 IQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGK---IG 338
I ++R LP+++ K+ + +Q +L+GETGSGKTTQ+ Q+ E + G +
Sbjct: 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVA 189
Query: 339 CTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDE 398
CTQPRRVAA SVA+RVA+E LG+EVGY+IRFEDC+ T++KYMTDGMLLRE + D
Sbjct: 190 CTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDP 249
Query: 399 NLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNI 458
L +Y VI+LDEAHERT+ TD+L G+LK++V++R DL++IV SATLDA +F YF NC +
Sbjct: 250 LLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPL 309
Query: 459 FSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHV-DEPEGDILLFLTGQEEIDFACESL 517
+IPGRT PV+I Y+ + DYL++A+ TV+QIH+ +E EGD+LLFLTGQEEID AC+ +
Sbjct: 310 LTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRI 369
Query: 518 CEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPG------GRKVVVATNIAEASLT 571
++ LG +V ++ ++P+YS LP + Q RIFEP PP GRKVVV+TNIAE SLT
Sbjct: 370 KREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLT 429
Query: 572 IDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESA 631
IDG+ +VIDPGFAKQ VYNP+ R++SL++T IS+ASA QRAGRAGRT PGKC+RLYTE A
Sbjct: 430 IDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKA 489
Query: 632 YRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGAL 691
Y++EM T PEI R NL L +K +GI++L+ FDF+DPP+P+ L+ A+E L L AL
Sbjct: 490 YKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAAL 549
Query: 692 DEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAK 751
+++G LT+LG MAEFPLDP L+KM++AS D CS+E+L+I AM+ F RP E +
Sbjct: 550 NDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKA 609
Query: 752 ADEKRARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSL 796
ADE + RF +GDHLTLL VY A+K + S+ WC +NF+N RSL
Sbjct: 610 ADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSL 654
>sp|O35286|DHX15_MOUSE Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Mus musculus GN=Dhx15 PE=2 SV=2
Length = 795
Score = 592 bits (1526), Expect = e-168, Method: Compositional matrix adjust.
Identities = 289/525 (55%), Positives = 387/525 (73%), Gaps = 10/525 (1%)
Query: 282 IQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGK---IG 338
I ++R LP+++ K+ + +Q +L+GETGSGKTTQ+ Q+ E + G +
Sbjct: 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVA 189
Query: 339 CTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDE 398
CTQPRRVAA SVA+RVA+E LG+EVGY+IRFEDC+ T++KYMTDGMLLRE + D
Sbjct: 190 CTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDP 249
Query: 399 NLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNI 458
L +Y VI+LDEAHERT+ TD+L G+LK++V++R DL++IV SATLDA +F YF NC +
Sbjct: 250 LLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPL 309
Query: 459 FSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHV-DEPEGDILLFLTGQEEIDFACESL 517
+IPGRT PV+I Y+ + DYL++A+ TV+QIH+ +E EGD+LLFLTGQEEID AC+ +
Sbjct: 310 LTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRI 369
Query: 518 CEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPG------GRKVVVATNIAEASLT 571
++ LG +V ++ ++P+YS LP + Q RIFEP PP GRKVVV+TNIAE SLT
Sbjct: 370 KREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLT 429
Query: 572 IDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESA 631
IDG+ +VIDPGFAKQ VYNP+ R++SL++T IS+ASA QRAGRAGRT PGKC+RLYTE A
Sbjct: 430 IDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKA 489
Query: 632 YRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGAL 691
Y++EM T PEI R NL L +K +GI++L+ FDF+DPP+P+ L+ A+E L L AL
Sbjct: 490 YKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAAL 549
Query: 692 DEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAK 751
+++G LT+LG MAEFPLDP L+KM++AS D CS+E+L+I AM+ F RP E +
Sbjct: 550 NDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKA 609
Query: 752 ADEKRARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSL 796
ADE + RF +GDHLTLL VY A+K + S+ WC +NF+N RSL
Sbjct: 610 ADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSL 654
>sp|O43143|DHX15_HUMAN Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Homo sapiens GN=DHX15 PE=1 SV=2
Length = 795
Score = 592 bits (1525), Expect = e-168, Method: Compositional matrix adjust.
Identities = 289/525 (55%), Positives = 387/525 (73%), Gaps = 10/525 (1%)
Query: 282 IQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGK---IG 338
I ++R LP+++ K+ + +Q +L+GETGSGKTTQ+ Q+ E + G +
Sbjct: 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVA 189
Query: 339 CTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDE 398
CTQPRRVAA SVA+RVA+E LG+EVGY+IRFEDC+ T++KYMTDGMLLRE + D
Sbjct: 190 CTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDP 249
Query: 399 NLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNI 458
L +Y VI+LDEAHERT+ TD+L G+LK++V++R DL++IV SATLDA +F YF NC +
Sbjct: 250 LLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPL 309
Query: 459 FSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHV-DEPEGDILLFLTGQEEIDFACESL 517
+IPGRT PV+I Y+ + DYL++A+ TV+QIH+ +E EGD+LLFLTGQEEID AC+ +
Sbjct: 310 LTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRI 369
Query: 518 CEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPG------GRKVVVATNIAEASLT 571
++ LG +V ++ ++P+YS LP + Q RIFEP PP GRKVVV+TNIAE SLT
Sbjct: 370 KREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLT 429
Query: 572 IDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESA 631
IDG+ +VIDPGFAKQ VYNP+ R++SL++T IS+ASA QRAGRAGRT PGKC+RLYTE A
Sbjct: 430 IDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKA 489
Query: 632 YRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGAL 691
Y++EM T PEI R NL L +K +GI++L+ FDF+DPP+P+ L+ A+E L L AL
Sbjct: 490 YKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAAL 549
Query: 692 DEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAK 751
+++G LT+LG MAEFPLDP L+KM++AS D CS+E+L+I AM+ F RP E +
Sbjct: 550 NDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKA 609
Query: 752 ADEKRARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSL 796
ADE + RF +GDHLTLL VY A+K + S+ WC +NF+N RSL
Sbjct: 610 ADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSL 654
>sp|Q20875|DHX15_CAEEL Putative pre-mRNA-splicing factor ATP-dependent RNA helicase
F56D2.6 OS=Caenorhabditis elegans GN=F56D2.6 PE=2 SV=1
Length = 739
Score = 580 bits (1494), Expect = e-164, Method: Compositional matrix adjust.
Identities = 283/532 (53%), Positives = 380/532 (71%), Gaps = 15/532 (2%)
Query: 281 SIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAE--------AGYT 332
+I E+R LP+++ K + ++ + +NQ + L+GETGSGKTTQ+ Q+ E
Sbjct: 68 AIWEKRSQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWAVEFMKQQQQGQPPG 127
Query: 333 TKGKIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLR 392
+ CTQPRRVAA SVA RVAEE LG+EVGY+IRFEDC TV+KY TDGMLLR
Sbjct: 128 QARLVACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISERTVLKYCTDGMLLR 187
Query: 393 EILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGY 452
E + L +Y V++LDEAHERT+ TD+L GL+K++V+ R D+++++ SATLDA +F Y
Sbjct: 188 EAMNSPLLDKYKVLILDEAHERTLATDILMGLIKEIVRNRADIKVVIMSATLDAGKFQRY 247
Query: 453 FFNCNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIH-VDEPEGDILLFLTGQEEID 511
F +C + S+PGRTFPV+I ++ DYL++A+ TV+QIH V+E EGDILLFLTGQEEI+
Sbjct: 248 FEDCPLLSVPGRTFPVEIFFTPNAEKDYLEAAIRTVIQIHMVEEVEGDILLFLTGQEEIE 307
Query: 512 FACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPG------GRKVVVATNI 565
AC+ + +I+ALG D L +P+YS LP Q RIFEPAPP RK V++TNI
Sbjct: 308 EACKRIDREIQALGADAGALSCIPLYSTLPPAAQQRIFEPAPPNRPNGAISRKCVISTNI 367
Query: 566 AEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYR 625
AE SLTIDG+ +VIDPGF+KQ VYNP+ R++SL++ PIS+ASA+QRAGRAGRT PGKC+R
Sbjct: 368 AETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAMQRAGRAGRTKPGKCFR 427
Query: 626 LYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQL 685
LYTE+AY SEM T PEI R NL L +K +G +L+ FDF+DPP+P+ L+ A+E L
Sbjct: 428 LYTETAYGSEMQDQTYPEILRSNLGSVVLQLKKLGTEDLVHFDFMDPPAPETLMRALELL 487
Query: 686 YSLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRP 745
L A++++G LT+LG MAEFPLDP L+KML+ S +L CS+EIL+I AM+ + RP
Sbjct: 488 NYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTELNCSNEILSITAMLSVPQCWVRP 547
Query: 746 RERQAKADEKRARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLK 797
E + +ADE +ARF +GDHLTLL VY ++K WC +NF+N R++K
Sbjct: 548 NEMRTEADEAKARFAHIDGDHLTLLNVYHSFKQNQEDPQWCYDNFINYRTMK 599
>sp|P53131|PRP43_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP43 PE=1 SV=1
Length = 767
Score = 576 bits (1485), Expect = e-163, Method: Compositional matrix adjust.
Identities = 293/588 (49%), Positives = 407/588 (69%), Gaps = 17/588 (2%)
Query: 226 IPKDLNRPWEDPMPETGERHLAQELRGVGLSARDMPEWKKNAYGKAFTFGQR----SKLS 281
I ++L++ P E H A E +G+ E +K GK F R +
Sbjct: 26 IAEELSKQHPLPSEEPLVHHDAGEFKGLQRHHTSAEEAQKLEDGKINPFTGREFTPKYVD 85
Query: 282 IQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLA--EAGYTTKGKIGC 339
I + RR LP+ ++E ++ +NQ+++ +GETGSGKTTQ+ Q++ E + ++ C
Sbjct: 86 ILKIRRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVAC 145
Query: 340 TQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDEN 399
TQPRRVAA SVA+RVAEE +LGEEVGY+IRFE+ T T++KYMTDGMLLRE + D +
Sbjct: 146 TQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHD 205
Query: 400 LSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIF 459
LS+YS I+LDEAHERT+ TD+L GLLKQ+VKRRPDL++I+ SATLDAE+F YF + +
Sbjct: 206 LSRYSCIILDEAHERTLATDILMGLLKQVVKRRPDLKIIIMSATLDAEKFQRYFNDAPLL 265
Query: 460 SIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCE 519
++PGRT+PV++ Y+ + DYLDSA+ TVLQIH E GDILLFLTG++EI+ A +
Sbjct: 266 AVPGRTYPVELYYTPEFQRDYLDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAVRKISL 325
Query: 520 KIKALGKD--VPELVVLPVYSALPSEIQSRIFEPAPPG-----GRKVVVATNIAEASLTI 572
+ L ++ L V P+Y +LP Q RIFEPAP GRKVV++TNIAE SLTI
Sbjct: 326 EGDQLVREEGCGPLSVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAETSLTI 385
Query: 573 DGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAY 632
DGI YV+DPGF+KQ VYNP+ R++SL+++PIS+ASA QRAGRAGRT PGKC+RLYTE A+
Sbjct: 386 DGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAF 445
Query: 633 RSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALD 692
+ E+ + PEI R NL T L +K +GI++L+ FDF+DPP+P+ ++ A+E+L L LD
Sbjct: 446 QKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNYLACLD 505
Query: 693 EEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKA 752
+EG LT LG+ ++FPLDP L+ ML+ S + CS EILTI+AM+ ++F RP + + +A
Sbjct: 506 DEGNLTPLGRLASQFPLDPMLAVMLIGSFEFQCSQEILTIVAMLSVPNVFIRPTKDKKRA 565
Query: 753 DEKRARFFQPEGDHLTLLAVYEAWK---AKNFSL-PWCGENFVNSRSL 796
D+ + F P+GDH+TLL VY A+K A + + WC ++++N RSL
Sbjct: 566 DDAKNIFAHPDGDHITLLNVYHAFKSDEAYEYGIHKWCRDHYLNYRSL 613
>sp|Q54NJ4|DHX15_DICDI Putative pre-mRNA-splicing factor ATP-dependent RNA helicase dhx15
OS=Dictyostelium discoideum GN=dhx15 PE=3 SV=1
Length = 727
Score = 567 bits (1461), Expect = e-160, Method: Compositional matrix adjust.
Identities = 278/527 (52%), Positives = 379/527 (71%), Gaps = 6/527 (1%)
Query: 273 TFGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYT 332
TF +R I E+R+ LP++K K + I+ + +NQV+IL+GETGSGKTTQ+ Q++ +AG
Sbjct: 62 TFSKRY-YEILEKRKELPVWKQKEDFIKVIKENQVVILVGETGSGKTTQIPQFVVDAGLI 120
Query: 333 TKGK-IGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLL 391
GK +G TQPRRVAA SVAKRV+EE LGEEVGY+IRFE+ + T +KY+TDGMLL
Sbjct: 121 RPGKMVGVTQPRRVAAISVAKRVSEEMDFELGEEVGYSIRFEELSSARTFMKYLTDGMLL 180
Query: 392 REILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSG 451
RE + D L++Y VI+LDEAHERT++TD+LFGL+K ++KRR DL+LIV SATL+A +F
Sbjct: 181 RESMSDPTLNKYDVIILDEAHERTLSTDILFGLIKDILKRRKDLKLIVMSATLEAGKFQK 240
Query: 452 YFFNCNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEID 511
YF N + +PGR PV+I Y+ + DYL+SA+ TV+ IH +E GDIL+FLTG+EEI+
Sbjct: 241 YFENAPLIKVPGRLHPVEIFYTEEAAKDYLESAVRTVIDIHTNEGTGDILVFLTGEEEIE 300
Query: 512 FACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLT 571
C + + + G +P + LP+YS+LP QS+IF+ RK +V+TNIAE SLT
Sbjct: 301 DTCAKIQRETRERG--LPPMKTLPLYSSLPIYQQSKIFDTCKE--RKCIVSTNIAETSLT 356
Query: 572 IDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESA 631
IDGI +V+DPGF+KQ YNP+ R++SL++ PIS+ASA QRAGRAGRT PGKC+RLYTE A
Sbjct: 357 IDGIVFVVDPGFSKQKTYNPRSRVESLLVAPISKASANQRAGRAGRTRPGKCFRLYTEKA 416
Query: 632 YRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGAL 691
++ M T PEI R NL L + +G+ +L+ FDF+DPP P LI A+E L+ LGAL
Sbjct: 417 FKELMIQQTHPEILRSNLASVVLQLLKLGVVDLVHFDFMDPPVPDTLIRALEVLHYLGAL 476
Query: 692 DEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAK 751
D+EG LT++G M+EFPLDP LSKML+ S + CS+EILTI AM+ + F RP++ + +
Sbjct: 477 DDEGQLTEIGSIMSEFPLDPQLSKMLIVSAERSCSNEILTIAAMLSAPNCFMRPKDNRIE 536
Query: 752 ADEKRARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
AD + F +GDHLT+L VY ++K WC +NF+N R++K+
Sbjct: 537 ADSAKKSFDHFDGDHLTMLNVYHSFKKNGEDPTWCYDNFLNHRAIKQ 583
>sp|Q5RBD4|DHX35_PONAB Probable ATP-dependent RNA helicase DHX35 OS=Pongo abelii GN=DHX35
PE=2 SV=1
Length = 720
Score = 545 bits (1405), Expect = e-154, Method: Compositional matrix adjust.
Identities = 280/564 (49%), Positives = 387/564 (68%), Gaps = 16/564 (2%)
Query: 252 GVGLSARDMPEWKKNAYGKAFTFGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILI 311
G G+S + + G + + LSI++QR+ LP+FKL+N ++ + + Q ++++
Sbjct: 17 GPGVSISEERQSLAENSGTTVVYNPYAALSIEQQRQKLPVFKLRNHILYLIENYQTVVIV 76
Query: 312 GETGSGKTTQLAQYLAEAGYTTKGKI-GCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAI 370
GETG GK+TQ+ QYLAEAG+T +G++ G TQPRRVAA +VA RVAEE G LG EVGY I
Sbjct: 77 GETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCI 136
Query: 371 RFEDCTGP-DTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLV 429
RF+DCT T IK++TDGML+RE+++D L++YSVIMLDEAHERT+ TD+ GLLK++
Sbjct: 137 RFDDCTDQLATRIKFLTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQ 196
Query: 430 KRRPDLRLIVTSATLDAERFSGYFF----------NCNIFSIPGRTFPVDINYSRQEVTD 479
K+R DLRLIV SATLDA++F +F C I ++ GRTFPVDI Y + V D
Sbjct: 197 KKRGDLRLIVASATLDADKFRDFFNQNETSDPARDTCVILTVGGRTFPVDIFYLQSPVPD 256
Query: 480 YLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEKIKALGKD--VPELVVLPVY 537
Y+ S + TV++IH E +GDIL FLTGQEE++ L E+ +AL + L VLP+Y
Sbjct: 257 YIKSTVETVVKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALARTGMKRHLRVLPMY 316
Query: 538 SALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDS 597
+ LPS Q ++FE RKV+VATN+AE S+TI GI YVID GF K YNP+ ++
Sbjct: 317 AGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIEC 376
Query: 598 LVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMK 657
LV+ P+SQASA QRAGR GR+ GKCYRLYTE A+ ++ +T+PE+QR NL L +K
Sbjct: 377 LVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAF-DKLPQSTVPEMQRSNLAPVILQLK 435
Query: 658 AMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLTK-LGKKMAEFPLDPPLSKM 716
A+GI+N+L F F+ PP Q+++ A+E LY+LG LD++ LT+ LG ++AEFPL+P +KM
Sbjct: 436 ALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKM 495
Query: 717 LLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQPEGDHLTLLAVYEAW 776
LL S + GCS EIL+I AM+Q +IF P ++++A +F EGDHLT+L VYEA+
Sbjct: 496 LLESGNFGCSQEILSIAAMMQIQNIFVVPPNQKSQAIRVHRKFAVEEGDHLTMLNVYEAF 555
Query: 777 KAKNFSLPWCGENFVNSRSLKKTA 800
N + WC E+F+N + L + A
Sbjct: 556 IKHNKNSQWCQEHFLNYKGLVRAA 579
>sp|Q9H5Z1|DHX35_HUMAN Probable ATP-dependent RNA helicase DHX35 OS=Homo sapiens GN=DHX35
PE=1 SV=2
Length = 703
Score = 545 bits (1403), Expect = e-154, Method: Compositional matrix adjust.
Identities = 275/547 (50%), Positives = 379/547 (69%), Gaps = 16/547 (2%)
Query: 269 GKAFTFGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAE 328
G + + LSI++QR+ LP+FKL+N ++ + + Q ++++GETG GK+TQ+ QYLAE
Sbjct: 34 GTTVVYNPYAALSIEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAE 93
Query: 329 AGYTTKGKI-GCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGP-DTVIKYMT 386
AG+T +G++ G TQPRRVAA +VA RVAEE G LG EVGY IRF+DCT T IK++T
Sbjct: 94 AGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLT 153
Query: 387 DGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDA 446
DGML+RE+++D L++YSVIMLDEAHERT+ TD+ GLLK++ K+R DLRLIV SATLDA
Sbjct: 154 DGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDA 213
Query: 447 ERFSGYFF----------NCNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEP 496
++F +F C I ++ GRTFPVDI Y + V DY+ S + TV++IH E
Sbjct: 214 DKFRDFFNQNETSDPARDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVVKIHQTEG 273
Query: 497 EGDILLFLTGQEEIDFACESLCEKIKALGKD--VPELVVLPVYSALPSEIQSRIFEPAPP 554
+GD+L FLTGQEE++ L E+ +AL + L VLP+Y+ LPS Q ++FE
Sbjct: 274 DGDVLAFLTGQEEVETVVSMLIEQARALARTGMKRHLRVLPMYAGLPSFEQMKVFERVSR 333
Query: 555 GGRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGR 614
RKV+VATN+AE S+TI GI YVID GF K YNP+ ++ LV+ P+SQASA QRAGR
Sbjct: 334 SVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGR 393
Query: 615 AGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPS 674
GR+ GKCYRLYTE A+ ++ +T+PE+QR NL L +KA+GI+N+L F F+ PP
Sbjct: 394 GGRSRSGKCYRLYTEEAF-DKLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPP 452
Query: 675 PQALISAMEQLYSLGALDEEGLLTK-LGKKMAEFPLDPPLSKMLLASVDLGCSDEILTII 733
Q+++ A+E LY+LG LD++ LT+ LG ++AEFPL+P +KMLL S + GCS EIL+I
Sbjct: 453 AQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIA 512
Query: 734 AMIQTGHIFTRPRERQAKADEKRARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNS 793
AM+Q +IF P +++ A +F EGDHLT+L +YEA+ N WC E+F+N
Sbjct: 513 AMMQIQNIFVVPPNQKSHAIRVHRKFAVEEGDHLTMLNIYEAFIKHNKDSKWCQEHFLNY 572
Query: 794 RSLKKTA 800
+ L + A
Sbjct: 573 KGLVRAA 579
>sp|P15938|PRP16_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP16 PE=1 SV=2
Length = 1071
Score = 539 bits (1388), Expect = e-152, Method: Compositional matrix adjust.
Identities = 278/534 (52%), Positives = 386/534 (72%), Gaps = 15/534 (2%)
Query: 278 SKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTT-KGK 336
SK I+ + LP+F+ +++L+ + +NQV+++IGETGSGKTTQLAQYL E GY +GK
Sbjct: 339 SKDDIKHTKEQLPVFRCRSQLLSLIRENQVVVIIGETGSGKTTQLAQYLYEEGYANDRGK 398
Query: 337 -IGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPD-TVIKYMTDGMLLREI 394
I TQPRRVAA SVAKRVA E LG+EVGY+IRFED T + T +K++TDG+LLRE
Sbjct: 399 SIVVTQPRRVAAISVAKRVAMEMQVPLGKEVGYSIRFEDVTDSECTKLKFVTDGILLRET 458
Query: 395 LIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFF 454
L+D+ L +YS +++DEAHER++NTD+L G K L+ RR DL+LI+TSAT++A++FS +F
Sbjct: 459 LLDDTLDKYSCVIIDEAHERSLNTDILLGFFKILLARRRDLKLIITSATMNAKKFSAFFG 518
Query: 455 NCNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHV--DEPEGDILLFLTGQEEIDF 512
N F+IPGRTFPV Y+ V DY+++A+ ++IH+ D GDIL+F+TGQE+I+
Sbjct: 519 NAPQFTIPGRTFPVQTIYTSNPVQDYVEAAVSQAVKIHLANDCSSGDILIFMTGQEDIET 578
Query: 513 ACESLCEKI-----KALG----KDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVAT 563
++L EK K G +++ ++ +LP+YSALP+++Q +IF+ RK+++AT
Sbjct: 579 TFDTLQEKFLQVYSKKFGTANFEEINDIEILPIYSALPADLQFKIFQDLHGTKRKIIIAT 638
Query: 564 NIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKC 623
NIAE SLTI GI YVID G++K VYNPK LDSLVITPIS+A+A QR+GRAGRT PG
Sbjct: 639 NIAETSLTIKGIRYVIDCGYSKLKVYNPKIGLDSLVITPISKANADQRSGRAGRTAPGTA 698
Query: 624 YRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLS-FDFVDPPSPQALISAM 682
YRLYTE ++ +M TIPEIQR NL +T L +K++ + + LS F F+D P Q +S++
Sbjct: 699 YRLYTEDTFKEDMYLQTIPEIQRTNLSNTLLLLKSLDVTDELSKFPFIDKPPLQTFLSSL 758
Query: 683 EQLYSLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIF 742
+L+ +GA+D G LT LG +MA+FPL P LSK+LL +V GCSDE+LTI++M+ +F
Sbjct: 759 YELWFIGAIDTSGQLTPLGLQMAKFPLQPSLSKILLIAVRNGCSDEMLTIVSMLSVPQVF 818
Query: 743 TRPRERQAKADEKRARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSL 796
RP+ERQ +AD R +FF + DHLTLL V+E W+A NFS WC ++FV +SL
Sbjct: 819 YRPKERQKEADIARNKFFIAKSDHLTLLNVFEQWRANNFSSHWCNKHFVQYKSL 872
>sp|P20095|PRP2_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein
PRP2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PRP2 PE=1 SV=1
Length = 876
Score = 518 bits (1333), Expect = e-146, Method: Compositional matrix adjust.
Identities = 260/537 (48%), Positives = 363/537 (67%), Gaps = 14/537 (2%)
Query: 269 GKAFTFGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAE 328
+A ++ L+IQE R+ LP+ + K+EL+Q + NQVLI++GETGSGKTTQL QYL E
Sbjct: 203 AQALETEEKRILTIQEARKLLPVHQYKDELLQEIKKNQVLIIMGETGSGKTTQLPQYLVE 262
Query: 329 AGYTTKGK--IGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPD-TVIKYM 385
G+T +GK I TQPRRVAATSVA RVA+E LG+EVGY IRFED T P+ TV+KYM
Sbjct: 263 DGFTDQGKLQIAITQPRRVAATSVAARVADEMNVVLGKEVGYQIRFEDKTTPNKTVLKYM 322
Query: 386 TDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLD 445
TDGMLLRE L D LS+YS IM+DEAHERT+ TD+L GLLK ++ +RP L+L+++SAT++
Sbjct: 323 TDGMLLREFLTDSKLSKYSCIMIDEAHERTLATDILIGLLKDILPQRPTLKLLISSATMN 382
Query: 446 AERFSGYFFNCNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEP-EGDILLFL 504
A++FS +F NC IF++PGR +PVDI+Y+ Q +Y+ +A+ T+ QIH + GDIL+FL
Sbjct: 383 AKKFSEFFDNCPIFNVPGRRYPVDIHYTLQPEANYIHAAITTIFQIHTTQSLPGDILVFL 442
Query: 505 TGQEEIDFACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATN 564
TGQEEI+ L E + LG ++++ P+Y+ LP E Q +IF+P P RKVV+ATN
Sbjct: 443 TGQEEIERTKTKLEEIMSKLGSRTKQMIITPIYANLPQEQQLKIFQPTPENCRKVVLATN 502
Query: 565 IAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCY 624
IAE SLTIDGI YVIDPGF K+N Y P + L+ P S+AS QRAGRAGR GPGKC+
Sbjct: 503 IAETSLTIDGIRYVIDPGFVKENSYVPSTGMTQLLTVPCSRASVDQRAGRAGRVGPGKCF 562
Query: 625 RLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQ 684
R++T+ +Y E+ PEI R NL +T L + ++G+ +L+ F +D PS L ++E
Sbjct: 563 RIFTKWSYLHELELMPKPEITRTNLSNTVLLLLSLGVTDLIKFPLMDKPSIPTLRKSLEN 622
Query: 685 LYSLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVD----LGCSDEILTIIAMI-QTG 739
LY LGAL+ +G +T+LGK M EFP +P +K+L + G +E LTI++M+ +T
Sbjct: 623 LYILGALNSKGTITRLGKMMCEFPCEPEFAKVLYTAATHEQCQGVLEECLTIVSMLHETP 682
Query: 740 HIFTRPRERQAKADEKRARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSL 796
+F K D + + E DH+ L ++ W+ FS WC ++ + +++
Sbjct: 683 SLFI-----GQKRDAAASVLSEVESDHILYLEIFNQWRNSKFSRSWCQDHKIQFKTM 734
>sp|Q03319|PRH1_SCHPO Probable ATP-dependent RNA helicase prh1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=prh1 PE=3 SV=2
Length = 719
Score = 511 bits (1317), Expect = e-144, Method: Compositional matrix adjust.
Identities = 250/519 (48%), Positives = 364/519 (70%), Gaps = 5/519 (0%)
Query: 282 IQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCTQ 341
I EQR++LPI++ + L Q + DN+V++++GETGSGK+TQ+ Q+L E Y +G + TQ
Sbjct: 89 ILEQRKNLPIWEAHDTLCQQIQDNRVIVVVGETGSGKSTQIPQFLNECPYAQEGCVAITQ 148
Query: 342 PRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLS 401
PRRVAA ++AKRVA E GCRLGE+VGY+IRF+D T T IKY+TDGMLLRE++ D LS
Sbjct: 149 PRRVAAVNLAKRVAAEQGCRLGEQVGYSIRFDDTTSKKTRIKYLTDGMLLRELINDPILS 208
Query: 402 QYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSI 461
QY ++LDEAHERT+ TD+L G +K+++K+RP LR+I+ SATL+AERFS +F I I
Sbjct: 209 QYHTLILDEAHERTLMTDMLLGFVKKIIKKRPALRVIIMSATLNAERFSEFFDGAEICYI 268
Query: 462 PGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEKI 521
GR +PV I+Y+ DYLD+ L T+ Q+H P GDIL+FLTGQ+EI+ A E+L +
Sbjct: 269 SGRQYPVQIHYTYTPEPDYLDACLRTIFQLHTKLPPGDILVFLTGQDEIE-ALEALIKSY 327
Query: 522 -KALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVID 580
K L ++P++ P++++LP E Q ++F PA RKVV++TNIAE S+TI GI YVID
Sbjct: 328 SKQLPSNLPQIQACPLFASLPQEQQLQVFLPALANHRKVVLSTNIAETSVTISGIRYVID 387
Query: 581 PGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTT 640
G AK +N K L+SL + PISQ++A+QR+GRAGR G+CYR+YTE+ + ++ T
Sbjct: 388 TGLAKIKQFNSKLGLESLTVQPISQSAAMQRSGRAGREAAGQCYRIYTEADF-DKLPKET 446
Query: 641 IPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLTKL 700
IPEI+RI+L LT+KA G N++++F ++DPPS + L+ A+E LYS+GALD+ G + L
Sbjct: 447 IPEIKRIDLSQAVLTLKARGQNDVINFHYMDPPSKEGLLRALEHLYSIGALDDNGHINDL 506
Query: 701 GKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFF 760
G +M+ PL P L++ +LA+ + C E++ +++ + T +F P+E++ +A E R +F
Sbjct: 507 GYQMSLIPLLPSLARAVLAAREHNCLSEVIDVVSCLSTDSMFLFPQEKRDEAIEARLKFL 566
Query: 761 QPEGDHLTLLAVYEAW--KAKNFSLPWCGENFVNSRSLK 797
EGD LT L + + + WC +NF+N R+LK
Sbjct: 567 HSEGDLLTCLNALRQYLESSHDSRKQWCSQNFINRRALK 605
>sp|Q9BKQ8|DHX35_CAEEL Probable ATP-dependent RNA helicase DHX35 homolog OS=Caenorhabditis
elegans GN=Y67D2.6 PE=3 SV=1
Length = 732
Score = 498 bits (1281), Expect = e-139, Method: Compositional matrix adjust.
Identities = 257/536 (47%), Positives = 355/536 (66%), Gaps = 20/536 (3%)
Query: 278 SKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGK- 336
+ L+IQ+QR LPIFK + ++ + +I++GETG GK+TQ+ Q+L EAG+ G+
Sbjct: 66 ASLNIQQQRIRLPIFKNRGHILYMCERYRTIIIVGETGCGKSTQVPQFLLEAGWAADGRQ 125
Query: 337 IGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILI 396
I TQPRRVA ++A RVAEE C LG +VGY +RF+D + DT +K+MTDG+LLREIL
Sbjct: 126 IVITQPRRVAVVTLATRVAEEKDCILGHDVGYTVRFDDVSDKDTKVKFMTDGLLLREILA 185
Query: 397 DENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYF--- 453
D LS+YS+IM+DEAHER+ NTD+L GLL+++++ R DLR+IV+SATLDAE F +F
Sbjct: 186 DPLLSKYSIIMIDEAHERSCNTDILLGLLRKIIQIRNDLRIIVSSATLDAELFKDFFEMN 245
Query: 454 -------FNCNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTG 506
I S+ GRT PV +++++ V DY SA+ TV+ IH E GDIL+FLTG
Sbjct: 246 ETGNSDKDTAGIISVEGRTHPVAVHHTKTSVPDYCQSAVDTVINIHKHENPGDILVFLTG 305
Query: 507 QEEIDFACESLCEKIKALG---KDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVAT 563
Q+E+ E +CEK++ L K+ L V+P Y ALP+ Q + F+ P G RKVVVAT
Sbjct: 306 QDEV----EDVCEKLRELAGNLKNCDRLWVVPCYGALPAREQMKAFDSTPHGTRKVVVAT 361
Query: 564 NIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKC 623
NIAEAS+TI GI YVID G+ K + +++L+ +S+ASA QRAGRAGR PGKC
Sbjct: 362 NIAEASITIPGICYVIDTGYVKLRAQHAANGVETLMRVTVSKASAEQRAGRAGRIRPGKC 421
Query: 624 YRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAME 683
YRLY ES + + T+PEIQR + T L +KA+G+ N+ F ++ PP A+I+ +E
Sbjct: 422 YRLYPESEF-ERFAEGTVPEIQRCQMASTILQLKALGVQNVHRFHYLSPPPSWAMINGLE 480
Query: 684 QLYSLGALDEEGLLTK-LGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIF 742
LY+LGA+DE LT LG +MAEFPL P SK LL S + GCS E++TI+AM+Q +F
Sbjct: 481 LLYALGAIDETSQLTSPLGLQMAEFPLPPMHSKCLLKSAEFGCSTEMVTIVAMMQIQDVF 540
Query: 743 TRPRERQAKADEKRARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
P ++ +AD R +F EGDH+T+L V+ + S WC ++FVN R L +
Sbjct: 541 ITPYRQRHQADVIRKKFAVEEGDHMTMLNVFTKFVENGRSKKWCSDHFVNYRGLMR 596
>sp|O17438|DHX15_STRPU Putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
(Fragment) OS=Strongylocentrotus purpuratus GN=PRP1 PE=2
SV=1
Length = 455
Score = 490 bits (1262), Expect = e-137, Method: Compositional matrix adjust.
Identities = 242/423 (57%), Positives = 312/423 (73%), Gaps = 7/423 (1%)
Query: 382 IKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTS 441
IKYMTDGMLLRE + D L +Y VI+LDEAHERT+ TD+L GLLK++ K+R DL+L+V S
Sbjct: 1 IKYMTDGMLLREGMTDPLLERYGVILLDEAHERTVATDILMGLLKEVEKQRSDLKLVVMS 60
Query: 442 ATLDAERFSGYFFNCNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHV-DEPEGDI 500
ATLDA +F YF N + ++PGRT PV+I Y+ + DYL++A+ TV+QIH+ +E EGD+
Sbjct: 61 ATLDAGKFQHYFDNAPLMTVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGDV 120
Query: 501 LLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPG----- 555
LLFLTGQEEI+ AC+ + ++ LG +V +L +P+YS LP +Q RIFE APP
Sbjct: 121 LLFLTGQEEIEEACKRIKREVDNLGPEVGDLKTIPLYSTLPPAMQQRIFEHAPPNKANGA 180
Query: 556 -GRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGR 614
GRKVVV+TNIAE SLTIDG+ +VIDPGFAKQ VYNP+ R++SL+++PIS+ASA QR GR
Sbjct: 181 IGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRVGR 240
Query: 615 AGRTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPS 674
AGRT PGKC+RLYTE AY SEM T PEI R NL L +K +GI++L+ FDF+DPP+
Sbjct: 241 AGRTRPGKCFRLYTEKAYDSEMQDNTYPEILRSNLGTVVLQLKKLGIDDLVHFDFMDPPA 300
Query: 675 PQALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIA 734
P+ L+ A+E L LGALD+ G LT+LG MAEFPLDP L+KM++AS D CS+EIL++ A
Sbjct: 301 PETLMRALELLNYLGALDDSGDLTRLGSMMAEFPLDPQLAKMVIASTDYSCSNEILSVTA 360
Query: 735 MIQTGHIFTRPRERQAKADEKRARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSR 794
M+ F RP E + ADE + RF +GDHLTLL VY A+K N WC +NF+ R
Sbjct: 361 MLSVPQCFLRPNEAKKLADEAKMRFAHIDGDHLTLLNVYHAFKQNNEDPQWCYDNFIQYR 420
Query: 795 SLK 797
SLK
Sbjct: 421 SLK 423
>sp|Q80VY9|DHX33_MOUSE Putative ATP-dependent RNA helicase DHX33 OS=Mus musculus GN=Dhx33
PE=1 SV=1
Length = 698
Score = 478 bits (1231), Expect = e-134, Method: Compositional matrix adjust.
Identities = 245/525 (46%), Positives = 343/525 (65%), Gaps = 10/525 (1%)
Query: 281 SIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCT 340
+++ QRRSLPIF+ + +L+ + + +LIGETGSGKTTQ+ QYL E G + +G I T
Sbjct: 57 ALELQRRSLPIFRARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEGGISRQGIIAVT 116
Query: 341 QPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENL 400
QPRRVAA S+A RV++E LG+ VGY +RFED T DT IK++TDGMLLRE + D L
Sbjct: 117 QPRRVAAISLATRVSDEKRTELGKLVGYTVRFEDVTSEDTRIKFLTDGMLLREAISDSLL 176
Query: 401 SQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPD-----LRLIVTSATLDAERFSGYFFN 455
+YS ++LDEAHERTI+TDVLFG++K KRR + L++IV SAT+D + FS YF
Sbjct: 177 RKYSCVILDEAHERTIHTDVLFGVVKTAQKRRKELGKLPLKVIVMSATMDVDLFSQYFNR 236
Query: 456 CNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEG-DILLFLTGQEEIDFAC 514
+ + GR P+ I Y++Q DYL +AL++V QIH + P DIL+FLTGQEEI+
Sbjct: 237 APVLYLEGRQHPIQIFYTKQPQQDYLHAALVSVFQIHQEAPASQDILVFLTGQEEIEAMS 296
Query: 515 ESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDG 574
++ + + L P ++VLP+Y++LP Q R+F+ AP G RKV+++TNIAE S+TI G
Sbjct: 297 KTCRDIARHLPDGCPSMLVLPLYASLPYSQQLRVFQGAPKGYRKVIISTNIAETSITITG 356
Query: 575 IFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRS 634
I YV+D G K YNP L+ L + +S+ A QR GRAGR G CYRLYTE +
Sbjct: 357 IKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEF-E 415
Query: 635 EMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGAL--- 691
+ T+PEIQR NL L + AM + N+L+FDF+ PSP + +A+ QL LGAL
Sbjct: 416 KFEKMTVPEIQRCNLASVILQLLAMKVPNVLTFDFMSKPSPDHIEAAIAQLDLLGALEHK 475
Query: 692 DEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAK 751
D++ LT +G+KMA FPL+P +K +L S C++EILTI++++ + P R+ +
Sbjct: 476 DDQLTLTPIGRKMAAFPLEPRFAKTILLSSKFHCTEEILTIVSLLSVDSVLYNPPARRDE 535
Query: 752 ADEKRARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSL 796
R +F EGDH+TLL +Y +K + WC ENFVNS+++
Sbjct: 536 VQSVRKKFISSEGDHITLLNIYRTFKNIGGNKDWCKENFVNSKNM 580
>sp|Q9H6R0|DHX33_HUMAN Putative ATP-dependent RNA helicase DHX33 OS=Homo sapiens GN=DHX33
PE=1 SV=2
Length = 707
Score = 478 bits (1231), Expect = e-134, Method: Compositional matrix adjust.
Identities = 245/529 (46%), Positives = 344/529 (65%), Gaps = 10/529 (1%)
Query: 281 SIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCT 340
+++ QRRSLPIF+ + +L+ + + +LIGETGSGKTTQ+ QYL E G + +G I T
Sbjct: 66 AVELQRRSLPIFQARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEGGISRQGIIAVT 125
Query: 341 QPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENL 400
QPRRVAA S+A RV++E LG+ VGY +RF+D T DT IK++TDGMLLRE + D L
Sbjct: 126 QPRRVAAISLATRVSDEKRTELGKLVGYTVRFDDVTSEDTRIKFLTDGMLLREAISDSLL 185
Query: 401 SQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPD-----LRLIVTSATLDAERFSGYFFN 455
+YS ++LDEAHERTI+TDVLFG++K KRR + L++IV SAT+D + FS YF
Sbjct: 186 RKYSCVILDEAHERTIHTDVLFGVVKAAQKRRKELGKLPLKVIVMSATMDVDLFSQYFNG 245
Query: 456 CNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEG-DILLFLTGQEEIDFAC 514
+ + GR P+ + Y++Q DYL +AL++V QIH + P DIL+FLTGQEEI+
Sbjct: 246 APVLYLEGRQHPIQVFYTKQPQNDYLHAALVSVFQIHQEAPSSQDILVFLTGQEEIEAMS 305
Query: 515 ESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDG 574
++ + K L P ++VLP+Y++LP Q R+F+ AP G RKV+++TNIAE S+TI G
Sbjct: 306 KTCRDIAKHLPDGCPAMLVLPLYASLPYAQQLRVFQGAPKGYRKVIISTNIAETSITITG 365
Query: 575 IFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRS 634
I YV+D G K YNP L+ L + +S+ A QR GRAGR G CYRLYTE +
Sbjct: 366 IKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEF-E 424
Query: 635 EMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGAL--- 691
+ T+PEIQR NL L + AM + N+L+FDF+ PSP + +A+ QL LGAL
Sbjct: 425 KFDKMTVPEIQRCNLASVMLQLLAMKVPNVLTFDFMSKPSPDHIQAAIAQLDLLGALEHK 484
Query: 692 DEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAK 751
D++ LT +G+KMA FPL+P +K +L S C++EILTI++++ + P R+ +
Sbjct: 485 DDQLTLTPMGRKMAAFPLEPKFAKTILMSPKFHCTEEILTIVSLLSVDSVLHNPPSRREE 544
Query: 752 ADEKRARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKKTA 800
R +F EGDH+TLL +Y +K + WC ENFVNS+++ A
Sbjct: 545 VQGVRKKFISSEGDHMTLLNIYRTFKNLGGNKDWCKENFVNSKNMTLVA 593
>sp|Q5XI69|DHX40_RAT Probable ATP-dependent RNA helicase DHX40 OS=Rattus norvegicus
GN=Dhx40 PE=2 SV=1
Length = 779
Score = 475 bits (1223), Expect = e-133, Method: Compositional matrix adjust.
Identities = 240/532 (45%), Positives = 347/532 (65%), Gaps = 23/532 (4%)
Query: 288 SLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCTQPRRVAA 347
+ PI K + +LIQAV DN LI+ G TGSGKTTQL +YL EAG++ G IG TQPR+VAA
Sbjct: 52 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAA 111
Query: 348 TSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIM 407
SVA+RVAEE C LG +VGY +RF+DC+ +T IKYMTDG LL+ IL D NL+++SVI+
Sbjct: 112 ISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLNKFSVII 171
Query: 408 LDEAHERTINTDVLFGLLKQLVK-----RRPDLRLIVTSATLDAERFSGYFFNCNIFSIP 462
LDEAHERT+ TD+LFGLLK+L + R+ L+++V SAT++ + S +F NC IF IP
Sbjct: 172 LDEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIP 231
Query: 463 GRTFPVDINYSR------QEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACES 516
GR +PV + +E T Y+ + + + IH++E GDIL+FLTGQ EI+ +CE
Sbjct: 232 GRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCEL 291
Query: 517 LCEKIKALGKD-------VPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEAS 569
L + +++ D + L++LP Y ++ ++ Q RIF P PPG RK V++TNI+ S
Sbjct: 292 LFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATS 351
Query: 570 LTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTE 629
LTIDGI YV+D GF KQ +NP+ LD L + PIS++ ALQR+GRAGRT GKC+R+Y++
Sbjct: 352 LTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTASGKCFRIYSK 411
Query: 630 SAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLG 689
+ M IPEI+R +L LT+K + I++++ F ++DPP+ + ++ A++QLY
Sbjct: 412 DFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCD 471
Query: 690 ALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPR--E 747
A+D G +T+LG M EFPL P L+ ++ + L C D +L I AM+ ++F RP E
Sbjct: 472 AIDRSGHVTRLGLSMVEFPLPPHLTCAVIRAASLDCEDLLLPIAAMLSVENVFIRPVDPE 531
Query: 748 RQAKADEKRARFFQPEG---DHLTLLAVYEAWKAKNFSLPWCGENFVNSRSL 796
Q +A++K G D TL ++E K+ WC +++++ R L
Sbjct: 532 YQKEAEQKHRELAAKAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCL 583
>sp|Q6PE54|DHX40_MOUSE Probable ATP-dependent RNA helicase DHX40 OS=Mus musculus GN=Dhx40
PE=2 SV=1
Length = 779
Score = 475 bits (1223), Expect = e-133, Method: Compositional matrix adjust.
Identities = 240/532 (45%), Positives = 347/532 (65%), Gaps = 23/532 (4%)
Query: 288 SLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCTQPRRVAA 347
+ PI K + +LIQAV DN LI+ G TGSGKTTQL +YL EAG++ G IG TQPR+VAA
Sbjct: 52 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAA 111
Query: 348 TSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIM 407
SVA+RVAEE C LG +VGY +RF+DC+ +T IKYMTDG LL+ IL D NLS++SVI+
Sbjct: 112 ISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLSKFSVII 171
Query: 408 LDEAHERTINTDVLFGLLKQLVK-----RRPDLRLIVTSATLDAERFSGYFFNCNIFSIP 462
LDEAHERT+ TD+LFGLLK+L + R+ L+++V SAT++ + S +F NC IF IP
Sbjct: 172 LDEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIP 231
Query: 463 GRTFPVDINYSR------QEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACES 516
GR +PV + +E T Y+ + + + IH++E GDIL+FLTGQ EI+ +CE
Sbjct: 232 GRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCEL 291
Query: 517 LCEKIKALGKD-------VPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEAS 569
L + +++ D + L++LP Y ++ ++ Q RIF P PPG RK V++TNI+ S
Sbjct: 292 LFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATS 351
Query: 570 LTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTE 629
LTIDGI YV+D GF KQ +NP+ LD L + PIS++ ALQR+GRAGRT GKC+R+Y++
Sbjct: 352 LTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTASGKCFRIYSK 411
Query: 630 SAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLG 689
+ M IPEI+R +L LT+K + I++++ F ++DPP+ + ++ A++QLY
Sbjct: 412 EFWSQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCD 471
Query: 690 ALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPR--E 747
A+D G +T+LG M EFPL P L+ ++ + L C D +L I AM+ ++F RP E
Sbjct: 472 AIDRSGHVTRLGLSMVEFPLPPHLTCAVIRAASLDCEDLLLPIAAMLSVENVFIRPVDPE 531
Query: 748 RQAKADEKRARFFQPEG---DHLTLLAVYEAWKAKNFSLPWCGENFVNSRSL 796
Q +A+++ G D TL ++E K+ WC +++++ R L
Sbjct: 532 YQKEAEQRHRELAAKAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCL 583
>sp|Q5R864|DHX40_PONAB Probable ATP-dependent RNA helicase DHX40 OS=Pongo abelii GN=DHX40
PE=2 SV=1
Length = 779
Score = 474 bits (1220), Expect = e-132, Method: Compositional matrix adjust.
Identities = 238/532 (44%), Positives = 347/532 (65%), Gaps = 23/532 (4%)
Query: 288 SLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCTQPRRVAA 347
+ PI K + ++IQAV DN LI+ G TGSGKTTQL +YL EAG++ G IG TQPR+VAA
Sbjct: 52 TFPIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAA 111
Query: 348 TSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIM 407
SVA+RVAEE C LG +VGY +RF+DC+ +T IKYMTDG LL+ IL D NL+++SVI+
Sbjct: 112 ISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVII 171
Query: 408 LDEAHERTINTDVLFGLLKQLVK-----RRPDLRLIVTSATLDAERFSGYFFNCNIFSIP 462
LDEAHERT+ TD+LFGLLK+L + R+ L+++V SAT++ + S +F NC IF IP
Sbjct: 172 LDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIP 231
Query: 463 GRTFPVDINYSR------QEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACES 516
GR +PV + +E T Y+ + + + IH++E GDIL+FLTGQ EI+ +CE
Sbjct: 232 GRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCEL 291
Query: 517 LCEKIKALGKD-------VPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEAS 569
L + +++ D + L++LP Y ++ ++ Q RIF P PPG RK V++TNI+ S
Sbjct: 292 LFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATS 351
Query: 570 LTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTE 629
LTIDGI YV+D GF KQ +NP+ LD L + PIS++ ALQR+GRAGRT GKC+R+Y++
Sbjct: 352 LTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTASGKCFRIYSK 411
Query: 630 SAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLG 689
+ M IPEI+R +L LT+K + I++++ F ++DPP+ + ++ A++QLY
Sbjct: 412 DFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCD 471
Query: 690 ALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPR--E 747
A+D G +T+LG M EFPL P L+ ++ + L C D +L I AM+ ++F RP E
Sbjct: 472 AIDRSGHVTRLGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVENVFIRPVDPE 531
Query: 748 RQAKADEKRARFFQPEG---DHLTLLAVYEAWKAKNFSLPWCGENFVNSRSL 796
Q +A+++ G D TL ++E K+ WC +++++ R L
Sbjct: 532 YQKEAEQRHRELAAKAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCL 583
>sp|Q8IX18|DHX40_HUMAN Probable ATP-dependent RNA helicase DHX40 OS=Homo sapiens GN=DHX40
PE=1 SV=2
Length = 779
Score = 474 bits (1219), Expect = e-132, Method: Compositional matrix adjust.
Identities = 238/532 (44%), Positives = 347/532 (65%), Gaps = 23/532 (4%)
Query: 288 SLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCTQPRRVAA 347
+ PI K + ++IQAV DN LI+ G TGSGKTTQL +YL EAG++ G IG TQPR+VAA
Sbjct: 52 TFPIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAA 111
Query: 348 TSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIM 407
SVA+RVAEE C LG +VGY +RF+DC+ +T IKYMTDG LL+ IL D NL+++SVI+
Sbjct: 112 ISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVII 171
Query: 408 LDEAHERTINTDVLFGLLKQLVK-----RRPDLRLIVTSATLDAERFSGYFFNCNIFSIP 462
LDEAHERT+ TD+LFGLLK+L + R+ L+++V SAT++ + S +F NC IF IP
Sbjct: 172 LDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIP 231
Query: 463 GRTFPVDINYSR------QEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACES 516
GR +PV + +E T Y+ + + + IH++E GDIL+FLTGQ EI+ +CE
Sbjct: 232 GRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCEL 291
Query: 517 LCEKIKALGKD-------VPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEAS 569
L + +++ D + L++LP Y ++ ++ Q RIF P PPG RK V++TNI+ S
Sbjct: 292 LFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATS 351
Query: 570 LTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTE 629
LTIDGI YV+D GF KQ +NP+ LD L + PIS++ ALQR+GRAGRT GKC+R+Y++
Sbjct: 352 LTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSK 411
Query: 630 SAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLG 689
+ M IPEI+R +L LT+K + I++++ F ++DPP+ + ++ A++QLY
Sbjct: 412 DFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCD 471
Query: 690 ALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPR--E 747
A+D G +T+LG M EFPL P L+ ++ + L C D +L I AM+ ++F RP E
Sbjct: 472 AIDRSGHVTRLGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVENVFIRPVDPE 531
Query: 748 RQAKADEKRARFFQPEG---DHLTLLAVYEAWKAKNFSLPWCGENFVNSRSL 796
Q +A+++ G D TL ++E K+ WC +++++ R L
Sbjct: 532 YQKEAEQRHRELAAKAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCL 583
>sp|Q9HE06|YK99_SCHPO Putative pre-mRNA-splicing factor ATP-dependent RNA helicase
C20H4.09 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=SPAC20H4.09 PE=3 SV=1
Length = 647
Score = 423 bits (1088), Expect = e-117, Method: Compositional matrix adjust.
Identities = 222/519 (42%), Positives = 334/519 (64%), Gaps = 6/519 (1%)
Query: 285 QRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTK-GKIGCTQPR 343
Q++ LPI K +N+L+ AV NQ+ I++G TG GKTTQ+ Q+L EAG+ ++ G IGCTQPR
Sbjct: 21 QKKLLPITKYRNQLLYAVEQNQITIVLGHTGCGKTTQIPQFLYEAGWASQNGIIGCTQPR 80
Query: 344 RVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQY 403
R+ A SV++RV+ E G GY+I+F+ T IKYMTDG+LL EI D L +Y
Sbjct: 81 RLVAKSVSERVSLELNSPPGSLCGYSIQFDHNVSEKTKIKYMTDGILLNEIFFDPLLERY 140
Query: 404 SVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNI--FSI 461
S+++LDE HERT++TD+L G+LK+++++R D RL+++SA++DA + S +F + SI
Sbjct: 141 SIVILDEVHERTLSTDLLLGVLKRILEKRNDFRLVLSSASVDANKLSQFFGQDKVCTMSI 200
Query: 462 PGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEKI 521
G+ FPV+ + ++ +Y+DSA+ TV+ I+ P GDIL+FL+G++EI++ + + + +
Sbjct: 201 EGKLFPVETLFLQKPTENYVDSAIETVININSTYPPGDILVFLSGRKEIEYCIKKIEDSL 260
Query: 522 KALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDP 581
+D LV LP+++ L + Q R+F RKV+ +TNIAE S+TIDGI YV+D
Sbjct: 261 IHASEDCQTLVPLPLHAGLTVDEQMRVFNIYDGDFRKVIFSTNIAETSITIDGIVYVVDS 320
Query: 582 GFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTI 641
GF KQ +YNP R L+ PIS++SA+QR+GRAGRT GK +RLYTE AY S M
Sbjct: 321 GFNKQRIYNPYTRTSKLINVPISKSSAIQRSGRAGRTMRGKVFRLYTEKAY-SLMKEEFE 379
Query: 642 PEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLTK-L 700
+I ++ L +K +G+ N+L F F P L++A+E LY LG LDE G LT L
Sbjct: 380 ADILNCDMSPLVLFLKGLGLKNILQFPFFVRPPTVHLMAALEDLYLLGVLDESGNLTDPL 439
Query: 701 GKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRP-RERQAKADEKRARF 759
G +++ LD +SK LL S GC+ EIL+I +++ G +F P + A + F
Sbjct: 440 GIQISNSFLDANISKALLTSNQFGCTHEILSIASILTAGEVFYNPTSSSKNDAFVAHSSF 499
Query: 760 FQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSLKK 798
F EGD +T L V+E++ L WC +N++N ++L++
Sbjct: 500 FANEGDIITALNVFESFVGNKKDLQWCRKNYLNYQTLRQ 538
>sp|P36009|DHR2_YEAST Probable ATP-dependent RNA helicase DHR2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=DHR2 PE=1
SV=1
Length = 735
Score = 411 bits (1057), Expect = e-113, Method: Compositional matrix adjust.
Identities = 225/532 (42%), Positives = 337/532 (63%), Gaps = 20/532 (3%)
Query: 284 EQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTK--GKIGCTQ 341
+ R +LP+++ K E++ + N V +LIGETGSGK+TQ+ Q++ E Y TK G I TQ
Sbjct: 76 KMRETLPVYQHKREIMSYIESNPVTVLIGETGSGKSTQIPQFVLEKLYDTKKHGSIAVTQ 135
Query: 342 PRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLS 401
PRRVAA ++A RVA+E GC+LGE+VGY++RF++ T T +KY+TDGMLLRE++++ +L
Sbjct: 136 PRRVAAINLATRVAQEHGCKLGEQVGYSVRFDNTTTTRTRLKYLTDGMLLRELMMNSDLR 195
Query: 402 QYSVIMLDEAHERTINTDVLFGLLKQLVKR-RPDLRLIVTSATLDAERFSGYFFNCNIFS 460
+YSVI++DEAHERT+ TD++ G LK L++ RPDLR+IV SATL AE+FS +F N I
Sbjct: 196 EYSVIVIDEAHERTVLTDLILGFLKSLIQGPRPDLRIIVMSATLQAEKFSEFFNNAPILF 255
Query: 461 IPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEK 520
+ GR F V Y + D +D+ + +QI+ E GDIL FL GQEEID A ++ EK
Sbjct: 256 VEGRKFDVKQYYLKAPTDDIVDAVIRCCIQINQGEELGDILCFLPGQEEIDKAV-TIMEK 314
Query: 521 IKALGKD---VPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFY 577
I D VP +V P+Y+ALP+ QS +F P RKVV +TNIAE S+TI G+ +
Sbjct: 315 IAKYVSDEAPVPLIVPYPLYAALPAVQQSLVFAPIKGFKRKVVFSTNIAETSVTISGVKF 374
Query: 578 VIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMS 637
V+D G K V+ + L +L+ PISQASA+QR+GRAGR GK +RLY ES Y ++
Sbjct: 375 VVDSGLRKVKVWRHQLGLATLLTVPISQASAMQRSGRAGRESEGKSFRLYCESDY-VKLP 433
Query: 638 PTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLL 697
+ PEI R ++ L +K G+++LL++ + + P +A++ +++LY LGALD G +
Sbjct: 434 KQSEPEIARSDVTSPVLMLKRYGVDDLLNWTWFENPGKEAIVMGLQELYELGALDTRGKI 493
Query: 698 TKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPR-ERQAKADEKR 756
TK G++MA PL P LS +L+ + ++GC +++ I++ + ++ P E + + +E+R
Sbjct: 494 TKRGQQMALLPLQPHLSSVLIKASEVGCLSQVIDIVSCLSVENLLLNPSPEERDEVNERR 553
Query: 757 ARFFQP---EGDHLTL-----LAVYEAWKAKNFSLP---WCGENFVNSRSLK 797
GD + L + YE K+++ S WC ++ R K
Sbjct: 554 LSLCNAGKRYGDLIMLKELFDIYFYELGKSQDASSERNDWCKGLCISIRGFK 605
>sp|P45018|HRPA_HAEIN ATP-dependent RNA helicase HrpA homolog OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=hrpA PE=3
SV=2
Length = 1304
Score = 388 bits (997), Expect = e-107, Method: Compositional matrix adjust.
Identities = 216/522 (41%), Positives = 324/522 (62%), Gaps = 27/522 (5%)
Query: 288 SLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCTQPRRVAA 347
SLP+ + K E+ + + ++QV+++ GETGSGKTTQL + E G+ G IG TQPRR+AA
Sbjct: 82 SLPVSQRKVEIQKLISEHQVIVVAGETGSGKTTQLPKMCLELGFGNLGMIGHTQPRRIAA 141
Query: 348 TSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIM 407
SVA R+AEE LG VGY +RF D +T IK MTDG+LL EI D L+QYS ++
Sbjct: 142 RSVAARIAEELETELGGLVGYKVRFNDQISDNTQIKLMTDGILLAEIQNDRFLNQYSCLI 201
Query: 408 LDEAHERTINTDVLFGLLKQLV-KRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTF 466
+DEAHER++N D + G LKQL+ +RR DL+LI+TSAT+D ERFS +F N I + GRT+
Sbjct: 202 IDEAHERSLNNDFILGYLKQLLPRRRRDLKLIITSATIDVERFSKHFNNAPIIEVSGRTY 261
Query: 467 PVDINYS---RQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEKIKA 523
PV++ Y ++ D L L V ++ E GDIL+F+ G+ EI E+L +
Sbjct: 262 PVEVRYRPVVEEDDQDQLQGILNAVDELQA-EGRGDILIFMNGEREIRDTAEALQK---- 316
Query: 524 LGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGF 583
+++ +LP+++ L ++ Q++IF P+ G ++V+ATN+AE SLT+ I YVIDPG
Sbjct: 317 --QNLKHTEILPLFARLSAQEQNKIFHPS--GLNRIVLATNVAETSLTVPSIKYVIDPGT 372
Query: 584 AKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPE 643
A+ + Y+ + ++ L I PISQASA QR GR GR G C RLY+E + S T PE
Sbjct: 373 ARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEEDFNSR-PEFTDPE 431
Query: 644 IQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALD-------EEGL 696
I R NL L M A+G++++ +F FVD P + + ++ L LGA + E+ L
Sbjct: 432 ILRTNLASVILQMTALGLDDIEAFPFVDAPDERHIQDGVKLLEELGAFETVQTKSGEKRL 491
Query: 697 LTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKR 756
LT++G+++A+ P+DP L+KM+L++V+ GC E++ I++ + RP+E+Q +DEK
Sbjct: 492 LTRVGRQLAQLPVDPRLAKMILSAVNFGCVYEMMIIVSALSIQDPRERPQEKQQASDEKH 551
Query: 757 ARFFQPEGDHLTLLAVYEAWK------AKNFSLPWCGENFVN 792
RF + D L L ++ + +KN C ++F+N
Sbjct: 552 RRFADKKSDFLAFLNLWRYLQEQQKESSKNQFRRQCQKDFLN 593
>sp|Q14147|DHX34_HUMAN Probable ATP-dependent RNA helicase DHX34 OS=Homo sapiens GN=DHX34
PE=1 SV=2
Length = 1143
Score = 382 bits (980), Expect = e-105, Method: Compositional matrix adjust.
Identities = 216/550 (39%), Positives = 323/550 (58%), Gaps = 28/550 (5%)
Query: 268 YGKAFTFGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLA 327
+G+ FG+ +KL Q +R +LPI + N ++Q + ++QV+++ G+TG GK+TQ+ QYL
Sbjct: 143 FGQKQAFGRLAKL--QRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLL 200
Query: 328 EAGYTTKGKIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTD 387
AG++ + CTQPRR+A S+AKRV E + G +VGY IRFE T I ++T
Sbjct: 201 AAGFS---HVACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTV 257
Query: 388 GMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAE 447
G+LLR+I + +L QY V+++DE HER ++ D L G+L++L+ RPDL++I+ SAT++
Sbjct: 258 GLLLRQIQREPSLPQYEVLIVDEVHERHLHNDFLLGVLQRLLPTRPDLKVILMSATINIS 317
Query: 448 RFSGYFFNCNIFSIPGRTFPVDINYSRQEV------TDYLD-SALITVLQI--HVDEPE- 497
FS YF N + +PGR FP+ + Y QE ++ LD + VL+ H PE
Sbjct: 318 LFSSYFSNAPVVQVPGRLFPITVVYQPQEAEPTTSKSEKLDPRPFLRVLESIDHKYPPEE 377
Query: 498 -GDILLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGG 556
GD+L+FL+G EI ++ E + VVLP++SAL Q ++F+ APPG
Sbjct: 378 RGDLLVFLSGMAEIS----AVLEAAQTYASHTQRWVVLPLHSALSVADQDKVFDVAPPGV 433
Query: 557 RKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAG 616
RK +++TNIAE S+TIDGI +V+D G K+ Y+P+ +L L ISQASA QR GRAG
Sbjct: 434 RKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAG 493
Query: 617 RTGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQ 676
RTGPG C+RLY ES Y + +P +PEI+R+ L L MK+M + + +F F++PP P
Sbjct: 494 RTGPGVCFRLYAESDYDA-FAPYPVPEIRRVALDSLVLQMKSMSVGDPRTFPFIEPPPPA 552
Query: 677 ALISAMEQLYSLGALDEEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMI 736
+L +A+ L GALD LT +G +A+ P+D + KML+ + +LTI A +
Sbjct: 553 SLETAILYLRDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLVEPVLTIAAAL 612
Query: 737 QTGHIFTRPRERQAKADEKRARFFQPEGDHLTLLAVYEAW------KAKNFSLPWCGENF 790
FTR + + R +GD TL V+ AW +++N S WC
Sbjct: 613 SVQSPFTRSAQSSPECAAARRPLESDQGDPFTLFNVFNAWVQVKSERSRN-SRKWCRRRG 671
Query: 791 VNSRSLKKTA 800
+ L + A
Sbjct: 672 IEEHRLYEMA 681
>sp|Q9DBV3|DHX34_MOUSE Probable ATP-dependent RNA helicase DHX34 OS=Mus musculus GN=Dhx34
PE=2 SV=2
Length = 1145
Score = 374 bits (959), Expect = e-102, Method: Compositional matrix adjust.
Identities = 217/581 (37%), Positives = 330/581 (56%), Gaps = 36/581 (6%)
Query: 246 LAQELRGVGLSARDMPEWKKNAYGKAF----------TFGQRSKLSIQEQRRSLPIFKLK 295
L+ + RG R +P + + + +A FG+ +KL Q +R +LPI +
Sbjct: 113 LSPDTRGRHGPGRGLPPERVSEFRRALLHYLDFQQKQAFGRLAKL--QRERAALPIAQYG 170
Query: 296 NELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCTQPRRVAATSVAKRVA 355
N ++Q + ++QV+++ G+TG GK+TQ+ QYL AG++ + CTQPRR+A S+AKRV
Sbjct: 171 NRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFS---HVACTQPRRIACISLAKRVG 227
Query: 356 EEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERT 415
E + G +VGY IRFE T I ++T G+LLR+I + +L QY V+++DE HER
Sbjct: 228 FESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQREPSLPQYQVLIVDEVHERH 287
Query: 416 INTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPVDINYSRQ 475
++ D L G+L++L+ +RPDL++I+ SAT++ FS YF + + +PGR FP+ + Y Q
Sbjct: 288 LHNDFLLGVLQRLLPQRPDLKVILMSATINISLFSSYFSHAPVVQVPGRLFPITVVYQPQ 347
Query: 476 EV------TDYLD-SALITVLQI----HVDEPEGDILLFLTGQEEIDFACESLCEKIKAL 524
E ++ LD + VL+ + E GD+L+FL+G EI ++ + +A
Sbjct: 348 EADQTASKSEKLDPRPFLRVLEAIDNKYPPEERGDLLVFLSGMAEI----TTVLDAAQAY 403
Query: 525 GKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVIDPGFA 584
VVLP++SAL Q ++F+ AP G RK +++TNIAE S+TIDGI +V+D G
Sbjct: 404 ASLTQRWVVLPLHSALSVSDQDKVFDVAPAGVRKCILSTNIAETSVTIDGIRFVVDSGKV 463
Query: 585 KQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTTIPEI 644
K+ Y+P+ +L L ISQASA QR GRAGRTGPG CYRLY ES Y + +P +PEI
Sbjct: 464 KEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCYRLYAESDYDA-FAPYPVPEI 522
Query: 645 QRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEGLLTKLGKKM 704
+R+ L L MK+M + + +F F++PP P ++ +A+ L GALD LT +G +
Sbjct: 523 RRVALDALVLQMKSMSVGDPRTFPFIEPPPPASVETAILYLQEQGALDSSEALTPIGSLL 582
Query: 705 AEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEKRARFFQPEG 764
A+ P+D + KML+ ++ +LTI A + FTR + R +G
Sbjct: 583 AQLPVDVVIGKMLILGSMFSLAEPVLTIAAALSVQSPFTRSAQSNLDCATARRPLESDQG 642
Query: 765 DHLTLLAVYEAW-----KAKNFSLPWCGENFVNSRSLKKTA 800
D TL V+ AW + S WC V L + A
Sbjct: 643 DPFTLFNVFNAWVQVKSERSGNSRKWCRRRGVEEHRLYEMA 683
>sp|P43329|HRPA_ECOLI ATP-dependent RNA helicase HrpA OS=Escherichia coli (strain K12)
GN=hrpA PE=3 SV=3
Length = 1300
Score = 373 bits (958), Expect = e-102, Method: Compositional matrix adjust.
Identities = 206/498 (41%), Positives = 304/498 (61%), Gaps = 23/498 (4%)
Query: 288 SLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCTQPRRVAA 347
+LP+ + K ++++A+ D+QV+I+ GETGSGKTTQL + E G KG IG TQPRR+AA
Sbjct: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAA 135
Query: 348 TSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIM 407
+VA R+AEE G +GY +RF D +T++K MTDG+LL EI D L QY I+
Sbjct: 136 RTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTII 195
Query: 408 LDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFP 467
+DEAHER++N D L G LK+L+ RRPDL++I+TSAT+D ERFS +F N I + GRT+P
Sbjct: 196 IDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYP 255
Query: 468 VDINYSRQEVTDYLDSALITVLQIHVD-------EPEGDILLFLTGQEEIDFACESLCEK 520
V++ Y + + + D LQ D E GDIL+F++G+ EI ++L +
Sbjct: 256 VEVRY--RPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNK- 312
Query: 521 IKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGIFYVID 580
++ +LP+Y+ L + Q+R+F+ GR++V+ATN+AE SLT+ GI YVID
Sbjct: 313 -----LNLRHTEILPLYARLSNSEQNRVFQSH--SGRRIVLATNVAETSLTVPGIKYVID 365
Query: 581 PGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSEMSPTT 640
PG A+ + Y+ + ++ L I PISQASA QR GR GR G C RLY+E + S T
Sbjct: 366 PGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSR-PEFT 424
Query: 641 IPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGAL--DEEG--- 695
PEI R NL L M A+G+ ++ +F FV+ P + + + L LGA+ DE+
Sbjct: 425 DPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAY 484
Query: 696 LLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEK 755
LT LG+++++ P+DP L++M+L + GC E + I + + RP ++Q +DEK
Sbjct: 485 KLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEK 544
Query: 756 RARFFQPEGDHLTLLAVY 773
RF E D L + ++
Sbjct: 545 HRRFHDKESDFLAFVNLW 562
>sp|Q9HDY4|YK16_SCHPO Putative ATP-dependent RNA helicase PB1A10.06c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAPB1A10.06c PE=3
SV=1
Length = 1183
Score = 370 bits (951), Expect = e-101, Method: Compositional matrix adjust.
Identities = 222/616 (36%), Positives = 331/616 (53%), Gaps = 103/616 (16%)
Query: 282 IQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTK-----GK 336
IQE R +LPI + +++ + N V+I+ G TGSGKTTQL Q+L EAG+++ G
Sbjct: 391 IQESRLALPIVAEEQRIMEQIFANDVVIICGATGSGKTTQLPQFLFEAGFSSPESENPGM 450
Query: 337 IGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILI 396
I TQPRRVAA S+AKRV+EE +V Y IRF+ PDT IK+MTDG+LLRE+
Sbjct: 451 IAITQPRRVAAVSIAKRVSEELTG-FSSKVSYQIRFDSTINPDTAIKFMTDGILLRELSS 509
Query: 397 DENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPD----------LRLIVTSATLDA 446
D L+ YS +++DEAHER++NTD+L GLL ++V+ R + L+LI+ SATL
Sbjct: 510 DFLLTAYSAVIVDEAHERSVNTDILLGLLSRIVRLRREMSKSDQKVKPLKLIIMSATL-- 567
Query: 447 ERFSGYFFNCNIFSIP-------GRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGD 499
R + + N +FS+P R +PV I+++R DYL A V IH P G
Sbjct: 568 -RVTDFSENKLLFSVPPPIIKIDARQYPVSIHFNRTTKPDYLQDAFDKVCLIHKRLPAGS 626
Query: 500 ILLFLTGQEEIDFACESL---------------------------CEKIKALGKDVPE-- 530
IL+FLTGQ+E++ C+ L E +++ +D+ +
Sbjct: 627 ILVFLTGQQEVEQLCQMLRKRFVRSFRPLKSRARIVVSRKTMSVENEDLQSETEDIDQVP 686
Query: 531 ---------------LVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDGI 575
+ VLP+YS L +E Q ++F+ +P G R +VATN+AE S+TI I
Sbjct: 687 TSSSSSVTYDDESEPMYVLPLYSLLTTEDQMKVFDSSPEGHRMCIVATNVAETSITIPNI 746
Query: 576 FYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRSE 635
YV+D G AK+ VYN K + + IS+A+A QRAGRAGRTGPG CYRLY+ + + S
Sbjct: 747 RYVVDCGKAKERVYNEKTSVQKFEVRWISKANADQRAGRAGRTGPGHCYRLYSSAVFDSS 806
Query: 636 MSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEEG 695
++PEI R + L MK M I+N+ +F F P L +++ L +LGA+D EG
Sbjct: 807 FPLHSLPEILRTPVESIVLQMKNMNIDNIANFPFPTSPGRSRLEKSLKLLSNLGAIDSEG 866
Query: 696 LLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKADEK 755
+LTKLG++M+ FPL P SKML+ GC ++ +++ + +F + A +K
Sbjct: 867 VLTKLGEQMSLFPLSPRFSKMLIIGQQHGCLPYVIALVSALSINQLFVSKQSLLYDAHDK 926
Query: 756 RAR------------------------FFQ---------PEGDHLTLLAVYEAWKAKNFS 782
+R +F P+ L+LL+ A+ +
Sbjct: 927 NSRSEETDLIDDDEIKQKEEYKNRMRGYFNAISRFQAIDPDAPALSLLSAVCAYDYASDK 986
Query: 783 LPWCGENFVNSRSLKK 798
+C EN++ ++L++
Sbjct: 987 RKFCKENYLREKALEE 1002
>sp|P0CE10|Y4102_ARATH Putative uncharacterized protein At4g01020, chloroplastic
OS=Arabidopsis thaliana GN=At4g01020 PE=4 SV=1
Length = 1787
Score = 365 bits (937), Expect = e-100, Method: Compositional matrix adjust.
Identities = 218/554 (39%), Positives = 322/554 (58%), Gaps = 40/554 (7%)
Query: 271 AFTFGQRSKLSIQEQRR---SLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLA 327
A+ + + L ++E RR LPI+ + ++++ +H Q+++LIGETGSGK+TQL Q+LA
Sbjct: 282 AYDWRRIHYLILRECRRLEDGLPIYAYRRQILKKIHCEQIMVLIGETGSGKSTQLVQFLA 341
Query: 328 EAGYTTKGKIGCTQPRRVAATSVAKRVAEEF-GCRLGEEVGYAIRFEDCTGPDTVIKYMT 386
++G I CTQPR++AA ++ RV EE GC V F + + YMT
Sbjct: 342 DSGVAASESIVCTQPRKIAAMTLTDRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMT 401
Query: 387 DGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDA 446
D LL+ + D +LS S +++DEAHER++NTD+L LL++L+ RR DLRL++ SAT DA
Sbjct: 402 DNCLLQHYMKDRSLSGISCVIIDEAHERSLNTDLLLALLRKLLSRRIDLRLVIMSATADA 461
Query: 447 ERFSGYFFNCNIFSIPGRTFPVDINYSRQ---------EVTDYLDSALITVLQIHVDEPE 497
+ S Y F+C I + GR FPV+I YS + Y + ++IH E E
Sbjct: 462 NQLSQYLFDCGILHVNGRNFPVEIVYSPSGTEENSVVGRIASYAGDVVKMAVEIHKTEKE 521
Query: 498 GDILLFLTGQEEIDFACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGR 557
G IL FLT Q E+++ACE P + LP++ L E Q +F+ PG R
Sbjct: 522 GTILAFLTSQAEVEWACERFV---------APSAIALPLHGKLSFEEQFMVFQNY-PGRR 571
Query: 558 KVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGR 617
KV+ ATNIAE SLTI G+ YVID G K++ Y P+ + L + +SQ+SA QRAGRAGR
Sbjct: 572 KVIFATNIAETSLTIPGVKYVIDSGMVKESKYEPRTGMSILKVCQVSQSSARQRAGRAGR 631
Query: 618 TGPGKCYRLYTESAYRSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQA 677
T PG+CYRLY+++ + S M+ PEI+R++L L M A+GI+N+ +F+FVD P P+A
Sbjct: 632 TEPGRCYRLYSKTDFDS-MNLNQEPEIRRVHLGVALLRMLALGIDNIAAFEFVDAPVPEA 690
Query: 678 LISAMEQLYSLGALDEEG---LLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIA 734
+ A++ L LGA+ E+ LT+ G + + L+P L K++L E + + A
Sbjct: 691 IAMAIQNLVQLGAVVEKNGVLELTQEGHCLVKLGLEPKLGKLILGCFRHRMGKEGIVLAA 750
Query: 735 -MIQTGHIFTRPR--ERQAKADEKRARFFQPEGDHLTLLAVYEAWKAKNFSLP------W 785
M IF R + + KAD + +F GD TLL+VY+ W SLP W
Sbjct: 751 VMANASSIFCRVGNFDDKMKADRLKVQFCNDNGDLFTLLSVYKEWA----SLPRDRRNKW 806
Query: 786 CGENFVNSRSLKKT 799
C EN +N++S+++
Sbjct: 807 CWENSLNAKSMRRC 820
>sp|Q7L7V1|DHX32_HUMAN Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
OS=Homo sapiens GN=DHX32 PE=1 SV=1
Length = 743
Score = 325 bits (833), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 191/532 (35%), Positives = 304/532 (57%), Gaps = 24/532 (4%)
Query: 284 EQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAE---AGYTTKGKIGCT 340
++R LPI+K K ++ + NQ++I+ G+ GK+ Q+ Q+ AE + + G + CT
Sbjct: 57 KEREDLPIWKEKYSFMENLLQNQIVIVSGDAKCGKSAQVPQWCAEYCLSIHYQHGGVICT 116
Query: 341 QPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENL 400
Q + +A RVA+E +G EVGY I FE+C +T+++Y TD ML RE++ + L
Sbjct: 117 QVHKQTVVQLALRVADEMDVNIGHEVGYVIPFENCCTNETILRYCTDDMLQREMMSNPFL 176
Query: 401 SQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFS 460
Y VI+LD+ HER+I TDVL GLLK ++ RP+L+LI+ S+ + + Y+ N +
Sbjct: 177 GSYGVIILDDIHERSIATDVLLGLLKDVLLARPELKLIINSSPHLISKLNSYYGNVPVIE 236
Query: 461 IPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEK 520
+ + PV++ Y + D +S L + +IH +GDI++FL +++I+ CE++ +
Sbjct: 237 VKNK-HPVEVVYLSEAQKDSFESILRLIFEIHHSGEKGDIVVFLACEQDIEKVCETVYQG 295
Query: 521 IKALGKDVPELVVLPVYSALPSEIQSRIFEP-------APPGGRKVVVATNIAEASLTID 573
L D+ ELVV+P+Y P E + +F+P R+VV+ T+ E + +
Sbjct: 296 -SNLNPDLGELVVVPLY---PKE-KCSLFKPLDETEKRCQVYQRRVVLTTSSGEFLIWSN 350
Query: 574 GIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYR 633
+ +VID G ++ VYNP+ R +SLV+ PISQ+ A R G + GK + LYTE
Sbjct: 351 SVRFVIDVGVERRKVYNPRIRANSLVMQPISQSQAEIRKQILGSSSSGKFFCLYTEEFAS 410
Query: 634 SEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDE 693
+M+P E+Q NL L MK + I L DF++ P+P++L+ A+E L L ALD
Sbjct: 411 KDMTPLKPAEMQEANLTSMVLFMKRIDIAGLGHCDFMNRPAPESLMQALEDLDYLAALDN 470
Query: 694 EGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTR-PRERQAKA 752
+G L++ G M+EFPLDP LSK +LAS + C DE+LTI AM+ + F+ P + A
Sbjct: 471 DGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVDEVLTIAAMVTAPNCFSHVPHGAEEAA 530
Query: 753 DEKRARFFQPEGDHLTLLAVYEAWKAKNFSLP-------WCGENFVNSRSLK 797
F PEGDH TL+++Y+A++ + WC + F+N +L+
Sbjct: 531 LTCWKTFLHPEGDHFTLISIYKAYQDTTLNSSSEYCVEKWCRDYFLNCSALR 582
>sp|Q8BZS9|DHX32_MOUSE Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
OS=Mus musculus GN=Dhx32 PE=2 SV=2
Length = 744
Score = 324 bits (830), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 190/532 (35%), Positives = 301/532 (56%), Gaps = 23/532 (4%)
Query: 284 EQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAE---AGYTTKGKIGCT 340
++R LPI+K K ++++ NQV+++ G++ GK++Q+ Q+ AE + + G + CT
Sbjct: 57 KEREELPIWKEKYSFMESLLQNQVVVVSGDSKCGKSSQVPQWCAEYCLSIHYQHGGVICT 116
Query: 341 QPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENL 400
Q + A +A RVA+E +G EVGY I FE+C +T+++Y TD ML RE++ + L
Sbjct: 117 QAHKQTAVQLALRVADEMDVNIGHEVGYVIPFENCCTTETILRYCTDDMLQREMMSNPFL 176
Query: 401 SQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFS 460
Y VI+LD+ HER++ TDVL GLLK ++ RP+L+LIV + L + S Y+ + +
Sbjct: 177 GSYGVIILDDVHERSLATDVLLGLLKDVLLARPELKLIVNCSPLLTSKLSSYYGDVPVIE 236
Query: 461 IPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEK 520
+ + PV++ Y D +S + + +IH +GD+++FL +++I+ E +C++
Sbjct: 237 VRNK-HPVEVVYLSGAQKDSFESVIRLIFEIHRSGEKGDVVVFLACEQDIEKTYELVCQE 295
Query: 521 IKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPG-------GRKVVVATNIAEASLTID 573
L DV +LVV+P+Y P E + +F P R+VV+ T+ E+ +
Sbjct: 296 GSNLNPDVGDLVVIPLY---PKE-KCSLFRPVDETEKRCQVYQRRVVLTTSCGESLIWSH 351
Query: 574 GIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYR 633
+ +VID G ++ VYNP+ R +SLV+ PISQ+ A R G + GK + LYTE
Sbjct: 352 TVKFVIDVGLERRQVYNPRIRANSLVLQPISQSQAEIRKQLLGSSPSGKLFCLYTEEFAS 411
Query: 634 SEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDE 693
+M P E+Q NL L MK + I L DF++ P+P++L+ A+E L L ALD
Sbjct: 412 KDMRPLKPAEMQEANLTSMVLFMKRVDIAGLGRCDFMNRPAPESLMQALEDLDYLAALDN 471
Query: 694 EGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTR-PRERQAKA 752
+G L++ G M+EFPLDP LSK +LAS + C DE+LTI AM+ F P + A
Sbjct: 472 DGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVDEMLTIAAMVTAPSCFLHVPHGAEEAA 531
Query: 753 DEKRARFFQPEGDHLTLLAVYEAWKAKNFSLP-------WCGENFVNSRSLK 797
F PEGDH TL+ VY A++ + WC + F++ +L+
Sbjct: 532 VTCWKTFLHPEGDHFTLINVYNAYQDTVLNSANEHCVEMWCHDCFLSCSALR 583
>sp|Q5XH12|DHX32_XENLA Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
OS=Xenopus laevis GN=dhx32 PE=2 SV=1
Length = 748
Score = 310 bits (794), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 180/531 (33%), Positives = 297/531 (55%), Gaps = 22/531 (4%)
Query: 284 EQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAE---AGYTTKGKIGCT 340
++R +LPI+K+K + ++ + NQ++++ SGK++Q+ Q+ AE AG+ G + CT
Sbjct: 59 KERETLPIWKIKYDFLEHLAHNQIVVVSAGPKSGKSSQIPQWCAEYCLAGHYQHGAVVCT 118
Query: 341 QPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENL 400
Q + A +A RVA+E +G EVGY + FE+C +T+++Y TD ML RE++ + L
Sbjct: 119 QAHKQTAVWLAMRVADEMDVNIGHEVGYIVPFENCCTSETILRYCTDEMLRREMMSNPLL 178
Query: 401 SQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFS 460
S Y V+++D+ +ER ++TDVL LK + RP+L++++ + + Y+ N +
Sbjct: 179 SSYGVVIIDDVYERFVSTDVLLSFLKVIAVSRPELKVVIITCPSLSGTLVSYYGNAPLVE 238
Query: 461 IPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILLFLTGQEEIDFACESLCEK 520
T V+ Y+ DY SAL + +IH + +GDI++FL +EEI A E + ++
Sbjct: 239 AEN-THSVESVYTTSLPRDYFHSALRLLFEIHHTKEKGDIVVFLACEEEIKRAYEHIKQE 297
Query: 521 IKALGKDVPELVVLPVY------SALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTIDG 574
+ ++ EL+ + +Y +P E + + + RKVV+ T++ E+ + +
Sbjct: 298 ALHMNPELGELMPIALYPHQSISDYIPYE---ELDDNSKNPKRKVVLTTSLGESLIWMKN 354
Query: 575 IFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAYRS 634
IF+VID G K+ VYN + R +SLV PIS+ A R + GK + LY E +
Sbjct: 355 IFFVIDVGIEKRKVYNTRIRAESLVTQPISKVRAKMRKHILSSSSEGKLFCLYPED-FAH 413
Query: 635 EMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALDEE 694
EM P +++ NL+ L +K M I L DF++ P P++L+ A+E L L ALD +
Sbjct: 414 EMKPFLTAKVEECNLISMVLFLKRMDIAGLAHCDFINRPDPESLMQALEDLDYLAALDND 473
Query: 695 GLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTR-PRERQAKAD 753
G L++ G M+EFPLDP LSK +LA+ + C DE+LT+ AM+ + F P E +
Sbjct: 474 GNLSEFGIIMSEFPLDPQLSKSILAACEFDCVDEMLTLAAMVTAPNCFIDLPPEAKELDL 533
Query: 754 EKRARFFQPEGDHLTLLAV---YEAWKAKNFSL----PWCGENFVNSRSLK 797
+ +FF PEGDH TL+ + YE K N S WC + ++ +L+
Sbjct: 534 IGKGKFFHPEGDHFTLINIYNEYEQMKRNNASQYDVEKWCQNHCLSFVALE 584
>sp|Q924H9|DQX1_MOUSE ATP-dependent RNA helicase DQX1 OS=Mus musculus GN=Dqx1 PE=2 SV=1
Length = 718
Score = 302 bits (773), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 190/524 (36%), Positives = 293/524 (55%), Gaps = 15/524 (2%)
Query: 284 EQRRSLPIFKLKNELIQAVHDNQ--VLILIGETGSGKTTQLAQYLAE----AGYTTKGKI 337
EQRR+LPI+ + ++ + + V+++ G+ GSGK+TQ+ Q+ AE G+ T G++
Sbjct: 37 EQRRALPIWAARFLFLEHLESSPTGVVLVSGDPGSGKSTQIPQWCAEFALARGFQT-GQV 95
Query: 338 GCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILID 397
TQP +AA S+A RVA+E LG E+GY+I EDCTGP+T++++ D + L+E+
Sbjct: 96 TVTQPYPLAAMSLASRVADEMDLTLGHEIGYSIPQEDCTGPNTMLRFCWDRLFLQEVAST 155
Query: 398 ENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRR--PDLRLIVTSATLDAERFSGYFFN 455
+SV++LDEA ER++ +D+L GLL+ R D R++V + +F ++ N
Sbjct: 156 RGPGAWSVLILDEAQERSVASDLLQGLLRDTRLRNLPGDPRVVVVTDPALEPKFQAFWGN 215
Query: 456 CNIFSIPGRTFPVD--INYSRQEVTDYLDSALITVLQI-HVDEPEGDILLFLTGQEEIDF 512
I +P R D + Y TD +++A VL++ +E GD+L++L +EEI
Sbjct: 216 SPIVRVP-REPGGDPTLAYKDTVPTDLVEAACQAVLELCQQEEAPGDVLVYLPSEEEISL 274
Query: 513 ACESLCEKIKALGKDVPELVVLPVYSALPSEIQSRIFEPAPPGGRKVVVATNIAEASLTI 572
CESL ++ L P VLP++ IQ+ ++E RK+VV +A+ S ++
Sbjct: 275 CCESLSGEMGTLAVPGPPPRVLPLHPGCAQAIQT-VYEDTDVSVRKIVVTHWLADFSFSL 333
Query: 573 DGIFYVIDPGFAKQNVYNPKQRLDSLVITPISQASALQRAGRAGRTGPGKCYRLYTESAY 632
I +VID G ++VYNP+ R +S V+ PIS+ A R RA PG C RLY++S
Sbjct: 334 PSIQHVIDSGLELRSVYNPRIRAESQVLRPISKCQAEARLLRAKGFPPGSCLRLYSKSTL 393
Query: 633 RSEMSPTTIPEIQRINLVHTTLTMKAMGINNLLSFDFVDPPSPQALISAMEQLYSLGALD 692
E P P++ NL L + I F+D P+P+AL+ A+E L L AL+
Sbjct: 394 ELEAPPLPHPKVCEENLSSLVLLLMRKQIAEPGECHFLDRPAPEALMRALEDLDYLAALN 453
Query: 693 EEGLLTKLGKKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGHIFTRPRERQAKA 752
++G L+ LG ++EFPL P L+K LLAS + C DE+LT+ AM+ FTRP +A
Sbjct: 454 DDGELSDLGVILSEFPLPPELAKALLASCEFNCVDEMLTLAAMLTAAPGFTRPPLSAGEA 513
Query: 753 DEKRARFFQPEGDHLTLLAVYEAWKAKNFSLPWCGENFVNSRSL 796
+RA +GDH +L+ VYEA+ WC +N SL
Sbjct: 514 ALRRA-LEHADGDHSSLIQVYEAFVQSGADEAWCQARGLNWESL 556
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.135 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 299,745,289
Number of Sequences: 539616
Number of extensions: 13164463
Number of successful extensions: 50357
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 123
Number of HSP's successfully gapped in prelim test: 159
Number of HSP's that attempted gapping in prelim test: 49543
Number of HSP's gapped (non-prelim): 452
length of query: 800
length of database: 191,569,459
effective HSP length: 126
effective length of query: 674
effective length of database: 123,577,843
effective search space: 83291466182
effective search space used: 83291466182
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)