BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003723
(800 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
***** No hits found ******
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.132 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 293,006,772
Number of Sequences: 539616
Number of extensions: 12569209
Number of successful extensions: 161014
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1486
Number of HSP's successfully gapped in prelim test: 857
Number of HSP's that attempted gapping in prelim test: 103274
Number of HSP's gapped (non-prelim): 27148
length of query: 800
length of database: 191,569,459
effective HSP length: 126
effective length of query: 674
effective length of database: 123,577,843
effective search space: 83291466182
effective search space used: 83291466182
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)