Query 003726
Match_columns 800
No_of_seqs 370 out of 3593
Neff 6.8
Searched_HMMs 46136
Date Fri Mar 29 04:50:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003726.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003726hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00142 sucrose synthase 100.0 2E-201 4E-206 1753.4 69.3 799 1-799 13-811 (815)
2 TIGR02470 sucr_synth sucrose s 100.0 1E-196 2E-201 1714.0 74.4 783 13-795 1-784 (784)
3 PF00862 Sucrose_synth: Sucros 100.0 5E-173 1E-177 1407.4 32.4 545 1-545 6-550 (550)
4 KOG0853 Glycosyltransferase [C 100.0 2E-61 4.4E-66 537.8 24.6 494 184-786 1-495 (495)
5 TIGR02468 sucrsPsyn_pln sucros 100.0 1.4E-58 3E-63 553.9 40.5 454 267-759 169-671 (1050)
6 TIGR02472 sucr_P_syn_N sucrose 100.0 3.3E-51 7.1E-56 466.6 41.2 424 268-756 1-438 (439)
7 PRK00654 glgA glycogen synthas 100.0 2.9E-44 6.3E-49 412.6 36.9 427 268-758 1-462 (466)
8 PLN02939 transferase, transfer 100.0 1.2E-42 2.6E-47 411.2 45.9 459 245-758 455-966 (977)
9 TIGR03449 mycothiol_MshA UDP-N 100.0 2.5E-43 5.4E-48 395.9 37.7 399 270-758 1-401 (405)
10 TIGR02095 glgA glycogen/starch 100.0 7.9E-43 1.7E-47 401.3 38.0 430 268-758 1-472 (473)
11 PLN02316 synthase/transferase 100.0 2E-41 4.3E-46 407.6 42.6 406 267-758 587-1033(1036)
12 PRK14098 glycogen synthase; Pr 100.0 9.6E-42 2.1E-46 393.0 38.2 439 265-758 4-485 (489)
13 cd03800 GT1_Sucrose_synthase T 100.0 2.7E-41 5.9E-46 375.3 38.9 397 269-753 1-397 (398)
14 PRK10307 putative glycosyl tra 100.0 1.2E-40 2.6E-45 375.9 37.4 396 268-758 1-407 (412)
15 PRK14099 glycogen synthase; Pr 100.0 1.6E-40 3.5E-45 382.6 38.4 437 267-758 3-478 (485)
16 cd03796 GT1_PIG-A_like This fa 100.0 1.9E-40 4.2E-45 372.9 37.1 365 269-758 1-367 (398)
17 cd03791 GT1_Glycogen_synthase_ 100.0 2.8E-40 6.2E-45 379.7 37.2 433 269-757 1-475 (476)
18 PRK15427 colanic acid biosynth 100.0 5E-39 1.1E-43 363.1 38.3 281 394-758 116-405 (406)
19 TIGR02149 glgA_Coryne glycogen 100.0 6.1E-39 1.3E-43 357.1 37.5 379 268-758 1-386 (388)
20 cd04962 GT1_like_5 This family 100.0 1.5E-38 3.2E-43 350.8 38.4 366 268-758 1-370 (371)
21 PLN02871 UDP-sulfoquinovose:DA 100.0 1.3E-38 2.7E-43 365.8 38.4 374 265-758 56-434 (465)
22 PRK15484 lipopolysaccharide 1, 100.0 1.4E-37 3E-42 348.3 39.3 375 266-759 1-378 (380)
23 cd03818 GT1_ExpC_like This fam 100.0 1.1E-37 2.3E-42 350.3 37.4 367 307-754 15-396 (396)
24 cd03805 GT1_ALG2_like This fam 100.0 5.2E-37 1.1E-41 342.1 38.0 386 268-752 1-392 (392)
25 TIGR03088 stp2 sugar transfera 100.0 1.5E-36 3.3E-41 337.1 37.7 365 269-758 3-372 (374)
26 PRK15490 Vi polysaccharide bio 100.0 7.7E-37 1.7E-41 347.2 34.9 400 286-758 169-575 (578)
27 KOG1111 N-acetylglucosaminyltr 100.0 1.2E-37 2.6E-42 328.1 25.8 363 268-757 1-365 (426)
28 cd05844 GT1_like_7 Glycosyltra 100.0 8.9E-37 1.9E-41 336.2 33.0 280 395-754 81-366 (367)
29 cd04955 GT1_like_6 This family 100.0 1.2E-35 2.5E-40 325.6 38.5 361 269-757 1-363 (363)
30 PRK15179 Vi polysaccharide bio 100.0 4.3E-36 9.3E-41 354.9 37.2 298 386-757 392-692 (694)
31 cd03792 GT1_Trehalose_phosphor 100.0 4.2E-36 9.2E-41 334.2 33.6 287 394-758 83-371 (372)
32 cd03819 GT1_WavL_like This fam 100.0 1.9E-35 4E-40 323.4 33.5 347 289-748 8-355 (355)
33 cd03821 GT1_Bme6_like This fam 100.0 6.6E-35 1.4E-39 316.3 36.5 372 269-753 1-374 (375)
34 cd03802 GT1_AviGT4_like This f 100.0 6.7E-34 1.5E-38 308.6 38.0 333 268-757 1-335 (335)
35 cd03799 GT1_amsK_like This is 100.0 4.6E-34 9.9E-39 311.6 36.7 272 394-752 77-355 (355)
36 cd03794 GT1_wbuB_like This fam 100.0 8.1E-34 1.8E-38 308.7 36.4 387 269-753 1-394 (394)
37 cd04951 GT1_WbdM_like This fam 100.0 1.2E-33 2.5E-38 309.0 36.8 358 269-757 1-359 (360)
38 cd03801 GT1_YqgM_like This fam 100.0 2.6E-33 5.6E-38 300.8 38.7 373 269-756 1-373 (374)
39 cd03795 GT1_like_4 This family 100.0 1.4E-33 3.1E-38 308.0 37.0 354 269-749 1-357 (357)
40 cd03814 GT1_like_2 This family 100.0 1.6E-33 3.5E-38 306.2 36.2 362 269-757 1-364 (364)
41 cd03807 GT1_WbnK_like This fam 100.0 1.3E-33 2.8E-38 305.0 34.8 363 269-757 1-365 (365)
42 cd03813 GT1_like_3 This family 100.0 1.3E-34 2.7E-39 333.6 27.9 294 395-757 172-475 (475)
43 cd03822 GT1_ecORF704_like This 100.0 4.9E-33 1.1E-37 303.0 38.4 358 269-757 1-366 (366)
44 cd03817 GT1_UGDG_like This fam 100.0 4.4E-33 9.5E-38 302.4 36.1 370 269-757 1-372 (374)
45 cd03812 GT1_CapH_like This fam 100.0 1.6E-33 3.4E-38 308.5 32.7 347 269-741 1-348 (358)
46 PRK09922 UDP-D-galactose:(gluc 100.0 1.8E-33 3.8E-38 312.2 30.5 268 394-757 82-354 (359)
47 cd03825 GT1_wcfI_like This fam 100.0 5.1E-33 1.1E-37 304.5 33.5 342 268-757 1-363 (365)
48 cd03816 GT1_ALG1_like This fam 100.0 9.7E-33 2.1E-37 312.7 36.5 392 265-753 1-411 (415)
49 PLN02846 digalactosyldiacylgly 100.0 6E-33 1.3E-37 314.2 33.7 372 267-759 4-392 (462)
50 cd03808 GT1_cap1E_like This fa 100.0 2.3E-32 4.9E-37 294.1 36.6 356 269-753 1-358 (359)
51 PRK10125 putative glycosyl tra 100.0 5.7E-33 1.2E-37 313.5 31.8 277 394-757 92-403 (405)
52 cd03820 GT1_amsD_like This fam 100.0 3.5E-32 7.6E-37 291.3 35.9 345 269-753 1-347 (348)
53 cd03806 GT1_ALG11_like This fa 100.0 4.2E-32 9.1E-37 307.9 36.4 368 290-750 13-418 (419)
54 cd03809 GT1_mtfB_like This fam 100.0 1.5E-32 3.3E-37 299.1 31.5 364 269-753 1-364 (365)
55 PLN02949 transferase, transfer 100.0 3.9E-32 8.6E-37 310.7 36.2 400 262-758 28-456 (463)
56 cd03798 GT1_wlbH_like This fam 100.0 1.7E-31 3.6E-36 288.2 38.9 284 394-757 91-375 (377)
57 cd03823 GT1_ExpE7_like This fa 100.0 4.7E-32 1E-36 293.6 34.2 354 269-757 1-358 (359)
58 TIGR03087 stp1 sugar transfera 100.0 1.6E-32 3.5E-37 308.6 27.7 283 394-757 102-395 (397)
59 cd03811 GT1_WabH_like This fam 100.0 2.7E-31 5.9E-36 284.5 33.9 351 269-744 1-352 (353)
60 TIGR02918 accessory Sec system 100.0 4.9E-31 1.1E-35 304.4 32.0 279 394-757 209-498 (500)
61 COG0297 GlgA Glycogen synthase 100.0 8.2E-31 1.8E-35 297.1 31.9 438 268-759 1-478 (487)
62 cd04946 GT1_AmsK_like This fam 100.0 1E-30 2.2E-35 295.6 30.6 276 394-753 125-406 (407)
63 PLN02275 transferase, transfer 100.0 1.4E-29 3E-34 282.8 30.1 317 308-717 24-370 (371)
64 cd03804 GT1_wbaZ_like This fam 100.0 7.5E-30 1.6E-34 281.0 26.4 264 394-752 81-350 (351)
65 cd04949 GT1_gtfA_like This fam 100.0 2.7E-29 5.9E-34 278.6 29.6 273 395-752 98-372 (372)
66 PLN02501 digalactosyldiacylgly 100.0 9.9E-29 2.1E-33 283.4 30.4 274 394-758 432-709 (794)
67 PHA01630 putative group 1 glyc 100.0 2.3E-28 4.9E-33 268.8 27.3 258 402-759 52-331 (331)
68 cd03793 GT1_Glycogen_synthase_ 100.0 3.1E-27 6.6E-32 269.1 30.8 329 394-758 146-586 (590)
69 PRK00726 murG undecaprenyldiph 100.0 7.2E-26 1.6E-30 250.7 31.6 343 268-757 2-356 (357)
70 cd03788 GT1_TPS Trehalose-6-Ph 99.9 7E-26 1.5E-30 259.8 30.1 312 396-754 131-457 (460)
71 PHA01633 putative glycosyl tra 99.9 2.1E-25 4.5E-30 244.0 25.5 225 460-754 89-335 (335)
72 cd03785 GT1_MurG MurG is an N- 99.9 1.9E-24 4E-29 237.8 31.7 324 289-749 8-348 (350)
73 TIGR01133 murG undecaprenyldip 99.9 3.4E-24 7.4E-29 235.6 29.4 316 307-750 19-346 (348)
74 TIGR02400 trehalose_OtsA alpha 99.9 6.1E-24 1.3E-28 242.8 29.1 319 385-755 117-453 (456)
75 PRK05749 3-deoxy-D-manno-octul 99.9 1.2E-23 2.6E-28 238.9 29.3 292 386-757 116-418 (425)
76 PRK13609 diacylglycerol glucos 99.9 7.3E-23 1.6E-27 228.9 27.9 271 384-757 94-370 (380)
77 PF00534 Glycos_transf_1: Glyc 99.9 3.9E-23 8.4E-28 204.5 14.3 160 558-738 12-172 (172)
78 PLN03063 alpha,alpha-trehalose 99.9 6E-22 1.3E-26 239.5 27.1 321 385-757 137-476 (797)
79 cd04950 GT1_like_1 Glycosyltra 99.9 7E-21 1.5E-25 212.9 32.5 266 393-756 99-369 (373)
80 TIGR02094 more_P_ylases alpha- 99.9 1.9E-21 4E-26 227.7 27.4 350 383-756 148-598 (601)
81 PRK14501 putative bifunctional 99.9 8.4E-21 1.8E-25 229.2 25.8 320 385-758 123-462 (726)
82 PRK13608 diacylglycerol glucos 99.9 2.5E-20 5.4E-25 209.9 27.7 262 395-757 103-370 (391)
83 PLN02605 monogalactosyldiacylg 99.9 3E-20 6.4E-25 208.5 27.9 263 395-756 99-379 (382)
84 cd01635 Glycosyltransferase_GT 99.9 3E-20 6.6E-25 188.5 24.2 121 566-702 109-229 (229)
85 COG0438 RfaG Glycosyltransfera 99.8 8.6E-19 1.9E-23 185.3 28.9 290 397-758 84-376 (381)
86 TIGR02398 gluc_glyc_Psyn gluco 99.8 9.8E-18 2.1E-22 191.5 28.4 314 396-755 132-479 (487)
87 cd04299 GT1_Glycogen_Phosphory 99.8 1E-17 2.2E-22 199.7 28.0 351 382-756 234-687 (778)
88 TIGR00236 wecB UDP-N-acetylglu 99.8 4.6E-18 1E-22 189.3 19.5 275 395-754 85-363 (365)
89 PRK09814 beta-1,6-galactofuran 99.8 2.6E-17 5.7E-22 181.4 24.5 245 396-751 63-324 (333)
90 PRK00025 lpxB lipid-A-disaccha 99.8 3.8E-17 8.3E-22 182.5 24.8 256 386-739 77-356 (380)
91 cd03786 GT1_UDP-GlcNAc_2-Epime 99.8 8.2E-17 1.8E-21 178.2 22.8 251 395-731 87-344 (363)
92 KOG1387 Glycosyltransferase [C 99.7 1.6E-15 3.4E-20 160.2 29.6 388 268-756 44-456 (465)
93 PLN03064 alpha,alpha-trehalose 99.7 6.7E-16 1.5E-20 186.7 27.1 318 385-755 221-558 (934)
94 TIGR03713 acc_sec_asp1 accesso 99.7 1.3E-14 2.7E-19 168.4 26.4 170 560-755 318-518 (519)
95 PF05693 Glycogen_syn: Glycoge 99.6 2.2E-14 4.8E-19 163.4 22.9 328 396-758 143-581 (633)
96 PF13692 Glyco_trans_1_4: Glyc 99.6 4.6E-15 1E-19 140.8 9.2 130 561-718 2-133 (135)
97 TIGR00215 lpxB lipid-A-disacch 99.6 4.7E-13 1E-17 150.7 25.0 250 394-737 87-364 (385)
98 KOG2941 Beta-1,4-mannosyltrans 99.5 1.2E-11 2.7E-16 131.2 26.0 381 309-753 33-436 (444)
99 PRK10117 trehalose-6-phosphate 99.4 2.4E-10 5.1E-15 130.1 29.4 321 385-756 113-451 (474)
100 PF13524 Glyco_trans_1_2: Glyc 99.4 4.2E-12 9.2E-17 113.3 10.7 92 657-754 1-92 (92)
101 PF00982 Glyco_transf_20: Glyc 99.3 2.1E-10 4.5E-15 131.8 24.4 309 396-755 141-471 (474)
102 PRK12446 undecaprenyldiphospho 99.3 4.3E-09 9.3E-14 117.3 30.1 322 289-755 10-348 (352)
103 COG0707 MurG UDP-N-acetylgluco 99.2 1.6E-08 3.4E-13 112.5 33.5 326 289-753 9-352 (357)
104 PF13439 Glyco_transf_4: Glyco 99.2 7.2E-11 1.6E-15 115.4 13.2 167 288-523 9-177 (177)
105 PF13579 Glyco_trans_4_4: Glyc 99.2 1.6E-11 3.6E-16 117.9 8.2 160 291-516 1-160 (160)
106 PLN02205 alpha,alpha-trehalose 99.2 3.9E-09 8.4E-14 129.0 27.0 307 398-755 203-548 (854)
107 COG0380 OtsA Trehalose-6-phosp 99.2 9.8E-09 2.1E-13 116.7 26.2 326 383-755 135-476 (486)
108 TIGR02919 accessory Sec system 99.1 7E-09 1.5E-13 118.3 25.0 144 561-739 282-426 (438)
109 cd03784 GT1_Gtf_like This fami 99.1 5.7E-08 1.2E-12 109.5 27.8 124 558-718 237-370 (401)
110 PF08323 Glyco_transf_5: Starc 99.1 6.1E-10 1.3E-14 117.9 10.6 183 269-477 1-229 (245)
111 TIGR01426 MGT glycosyltransfer 99.0 4.2E-07 9.1E-12 102.5 29.4 112 628-756 273-390 (392)
112 PF09314 DUF1972: Domain of un 98.9 3.9E-08 8.5E-13 99.1 15.9 176 268-518 2-185 (185)
113 TIGR03492 conserved hypothetic 98.8 2.7E-06 5.9E-11 96.4 27.6 166 560-754 204-394 (396)
114 PF13528 Glyco_trans_1_3: Glyc 98.8 8.3E-07 1.8E-11 96.8 22.3 116 559-715 191-315 (318)
115 TIGR03568 NeuC_NnaA UDP-N-acet 98.7 2E-06 4.3E-11 96.5 22.1 267 395-754 92-363 (365)
116 TIGR00661 MJ1255 conserved hyp 98.6 8.7E-06 1.9E-10 89.5 23.2 75 629-714 228-308 (321)
117 COG1519 KdtA 3-deoxy-D-manno-o 98.6 6.8E-05 1.5E-09 83.5 29.1 284 386-756 115-415 (419)
118 PF13477 Glyco_trans_4_2: Glyc 98.5 2.3E-06 4.9E-11 81.6 13.9 123 307-471 15-139 (139)
119 PHA03392 egt ecdysteroid UDP-g 98.4 0.0002 4.4E-09 83.8 30.1 138 561-737 297-445 (507)
120 TIGR03590 PseG pseudaminic aci 98.4 4.4E-05 9.5E-10 82.5 21.8 97 561-686 171-268 (279)
121 PF02350 Epimerase_2: UDP-N-ac 98.2 3.9E-05 8.4E-10 85.5 18.2 266 396-755 67-344 (346)
122 PF13844 Glyco_transf_41: Glyc 98.2 2.9E-05 6.3E-10 88.7 16.8 185 547-758 273-466 (468)
123 KOG3742 Glycogen synthase [Car 98.2 1.2E-05 2.6E-10 88.5 11.9 99 654-753 500-607 (692)
124 cd04300 GT1_Glycogen_Phosphory 98.1 9.3E-05 2E-09 89.1 18.2 145 551-704 520-682 (797)
125 COG1819 Glycosyl transferases, 98.0 0.00035 7.5E-09 79.6 18.9 158 559-757 236-400 (406)
126 PLN02448 UDP-glycosyltransfera 97.9 0.0097 2.1E-07 69.0 30.3 140 560-736 274-428 (459)
127 COG3914 Spy Predicted O-linked 97.9 0.00074 1.6E-08 77.5 19.9 181 551-758 422-613 (620)
128 TIGR02093 P_ylase glycogen/sta 97.8 0.00034 7.4E-09 84.1 16.6 144 551-703 517-678 (794)
129 PF02684 LpxB: Lipid-A-disacch 97.8 0.0011 2.5E-08 74.3 19.7 144 558-730 181-346 (373)
130 PRK14986 glycogen phosphorylas 97.8 0.00031 6.7E-09 84.7 15.5 151 552-712 534-702 (815)
131 PRK14985 maltodextrin phosphor 97.7 0.00025 5.5E-09 85.0 13.5 144 552-704 520-681 (798)
132 PF04007 DUF354: Protein of un 97.7 0.0076 1.6E-07 66.8 23.4 62 648-717 243-307 (335)
133 COG0058 GlgP Glucan phosphoryl 97.6 0.0022 4.8E-08 76.6 17.4 143 553-704 479-630 (750)
134 PLN02208 glycosyltransferase f 97.4 0.35 7.7E-06 55.9 32.3 92 631-737 312-415 (442)
135 COG4641 Uncharacterized protei 97.3 0.019 4.1E-07 63.5 19.9 193 508-757 161-360 (373)
136 PF12000 Glyco_trans_4_3: Gkyc 97.3 0.0014 2.9E-08 65.7 9.9 111 385-522 56-170 (171)
137 PRK10017 colanic acid biosynth 97.2 0.41 9E-06 55.0 30.5 105 620-739 297-407 (426)
138 COG0381 WecB UDP-N-acetylgluco 97.2 0.11 2.4E-06 58.0 23.7 276 394-758 90-370 (383)
139 PLN00414 glycosyltransferase f 97.1 0.69 1.5E-05 53.5 31.3 87 641-737 319-416 (446)
140 PRK01021 lpxB lipid-A-disaccha 97.1 0.035 7.6E-07 65.5 20.6 196 394-684 308-513 (608)
141 COG0763 LpxB Lipid A disacchar 97.1 0.014 3E-07 64.9 16.2 199 394-685 83-290 (381)
142 PRK02797 4-alpha-L-fucosyltran 97.0 0.17 3.7E-06 55.0 22.7 170 560-758 144-316 (322)
143 PLN03007 UDP-glucosyltransfera 97.0 0.84 1.8E-05 53.4 30.4 79 630-718 345-438 (482)
144 PF00343 Phosphorylase: Carboh 97.0 0.034 7.3E-07 66.7 18.8 142 553-703 436-595 (713)
145 PLN02173 UDP-glucosyl transfer 96.9 1.3 2.9E-05 51.2 32.1 79 630-718 317-406 (449)
146 PLN02210 UDP-glucosyl transfer 96.8 1.5 3.3E-05 50.9 32.1 133 560-718 269-413 (456)
147 COG4671 Predicted glycosyl tra 96.8 0.16 3.5E-06 55.8 20.5 134 559-718 218-363 (400)
148 PLN02863 UDP-glucoronosyl/UDP- 96.8 1.7 3.7E-05 50.7 32.8 79 630-718 343-431 (477)
149 PLN02562 UDP-glycosyltransfera 96.7 1.7 3.8E-05 50.3 31.7 87 630-730 328-419 (448)
150 PLN02410 UDP-glucoronosyl/UDP- 96.3 3.2 6.9E-05 48.2 30.4 79 630-718 324-408 (451)
151 PLN02554 UDP-glycosyltransfera 96.3 3.5 7.5E-05 48.3 32.7 79 630-718 342-438 (481)
152 PLN02670 transferase, transfer 96.2 3.5 7.6E-05 48.1 32.4 105 641-757 346-464 (472)
153 PLN02992 coniferyl-alcohol glu 96.1 3.9 8.5E-05 47.8 29.5 78 631-718 339-425 (481)
154 PRK14089 ipid-A-disaccharide s 96.1 0.062 1.3E-06 60.0 12.6 91 562-685 169-261 (347)
155 PF07429 Glyco_transf_56: 4-al 96.0 0.56 1.2E-05 51.8 19.0 140 560-713 183-326 (360)
156 PF11440 AGT: DNA alpha-glucos 95.9 1.6 3.5E-05 46.7 21.2 139 565-718 187-351 (355)
157 PLN02555 limonoid glucosyltran 95.9 5.1 0.00011 46.9 29.0 94 629-737 336-441 (480)
158 PF06258 Mito_fiss_Elm1: Mitoc 95.9 0.74 1.6E-05 50.7 19.8 110 559-688 145-259 (311)
159 PLN00164 glucosyltransferase; 95.6 4.6 0.0001 47.3 26.1 86 641-736 346-444 (480)
160 PF08288 PIGA: PIGA (GPI ancho 95.5 0.049 1.1E-06 48.1 7.1 72 348-430 13-86 (90)
161 KOG1050 Trehalose-6-phosphate 94.9 2 4.3E-05 52.5 20.6 295 383-719 128-439 (732)
162 COG3980 spsG Spore coat polysa 94.9 0.77 1.7E-05 49.3 14.9 140 560-736 158-305 (318)
163 PF04464 Glyphos_transf: CDP-G 94.2 0.21 4.6E-06 55.9 9.7 133 551-718 184-334 (369)
164 PLN02764 glycosyltransferase f 93.3 20 0.00044 41.7 33.9 72 641-718 324-405 (453)
165 COG3660 Predicted nucleoside-d 92.9 9.7 0.00021 40.7 18.2 112 558-689 159-276 (329)
166 PLN03015 UDP-glucosyl transfer 92.0 30 0.00065 40.5 30.3 72 641-718 342-424 (470)
167 COG1817 Uncharacterized protei 91.5 12 0.00025 41.1 17.3 51 666-718 259-312 (346)
168 PF05159 Capsule_synth: Capsul 91.1 11 0.00025 40.2 17.3 104 558-685 114-225 (269)
169 PF04101 Glyco_tran_28_C: Glyc 90.8 0.11 2.3E-06 51.4 1.2 91 630-735 55-155 (167)
170 PF00201 UDPGT: UDP-glucoronos 89.8 1.1 2.4E-05 52.3 8.9 134 560-730 276-415 (500)
171 cd03789 GT1_LPS_heptosyltransf 87.8 3.4 7.3E-05 44.3 10.2 100 563-686 124-225 (279)
172 PLN03004 UDP-glycosyltransfera 86.8 14 0.0003 43.0 15.1 84 630-729 334-429 (451)
173 PF10087 DUF2325: Uncharacteri 85.2 2.2 4.7E-05 38.6 5.9 84 595-693 2-90 (97)
174 PLN02534 UDP-glycosyltransfera 84.5 92 0.002 36.7 31.3 79 630-718 344-442 (491)
175 PLN02152 indole-3-acetate beta 83.9 14 0.00031 42.9 13.4 142 560-718 261-415 (455)
176 PLN02167 UDP-glycosyltransfera 83.3 42 0.00091 39.3 17.0 78 630-718 340-432 (475)
177 COG2327 WcaK Polysaccharide py 83.2 89 0.0019 35.5 27.4 98 620-730 256-357 (385)
178 TIGR02195 heptsyl_trn_II lipop 80.7 15 0.00033 40.4 11.6 100 560-684 173-276 (334)
179 TIGR03609 S_layer_CsaB polysac 80.3 76 0.0016 34.3 16.8 86 576-684 190-275 (298)
180 PF01075 Glyco_transf_9: Glyco 80.3 13 0.00029 38.7 10.6 103 559-684 104-208 (247)
181 PRK10422 lipopolysaccharide co 79.9 16 0.00035 40.7 11.6 104 560-685 183-288 (352)
182 PF04413 Glycos_transf_N: 3-De 78.4 11 0.00024 38.3 8.9 77 386-477 87-163 (186)
183 KOG0853 Glycosyltransferase [C 76.5 11 0.00023 44.1 8.9 101 457-591 203-303 (495)
184 PF03401 TctC: Tripartite tric 75.5 23 0.00051 38.2 10.9 150 561-737 78-245 (274)
185 PF03033 Glyco_transf_28: Glyc 75.0 2.1 4.6E-05 40.4 2.5 28 290-329 8-35 (139)
186 PLN02207 UDP-glycosyltransfera 74.0 1.1E+02 0.0024 35.9 16.5 78 630-718 332-424 (468)
187 PF12038 DUF3524: Domain of un 73.8 15 0.00034 36.6 8.1 108 395-517 58-168 (168)
188 COG0859 RfaF ADP-heptose:LPS h 73.5 22 0.00047 39.5 10.4 99 561-685 176-277 (334)
189 PF06925 MGDG_synth: Monogalac 73.4 18 0.0004 35.8 8.8 66 385-476 80-150 (169)
190 PF11997 DUF3492: Domain of un 72.8 3.4 7.5E-05 44.5 3.6 79 395-473 171-255 (268)
191 TIGR02193 heptsyl_trn_I lipopo 72.3 32 0.00069 37.5 11.2 100 560-685 179-280 (319)
192 PF08660 Alg14: Oligosaccharid 72.0 12 0.00026 37.5 7.1 63 395-476 91-159 (170)
193 TIGR02201 heptsyl_trn_III lipo 70.2 45 0.00097 36.9 11.9 102 561-684 182-285 (344)
194 PF01975 SurE: Survival protei 69.7 37 0.00081 34.9 10.2 39 268-332 1-39 (196)
195 PF10933 DUF2827: Protein of u 68.1 41 0.0009 37.7 10.6 151 560-739 189-345 (364)
196 PRK05562 precorrin-2 dehydroge 67.3 1.7E+02 0.0037 30.8 14.7 127 591-742 47-180 (223)
197 COG1618 Predicted nucleotide k 66.0 1.4E+02 0.0031 30.1 12.7 125 264-428 2-139 (179)
198 PRK10964 ADP-heptose:LPS hepto 63.8 51 0.0011 36.0 10.7 97 563-685 181-279 (322)
199 KOG4626 O-linked N-acetylgluco 62.7 1.1E+02 0.0023 36.8 12.9 187 550-764 750-944 (966)
200 PRK10916 ADP-heptose:LPS hepto 60.1 77 0.0017 35.1 11.3 99 562-684 182-286 (348)
201 KOG1192 UDP-glucuronosyl and U 53.9 2.6E+02 0.0057 32.3 14.9 139 561-733 278-431 (496)
202 COG2910 Putative NADH-flavin r 53.4 12 0.00025 38.2 2.9 33 268-329 1-33 (211)
203 COG1703 ArgK Putative periplas 52.0 2.5E+02 0.0055 31.0 12.9 110 292-429 63-176 (323)
204 PF15024 Glyco_transf_18: Glyc 51.1 1.3E+02 0.0028 35.8 11.4 157 559-761 275-458 (559)
205 COG4088 Predicted nucleotide k 49.6 89 0.0019 32.7 8.5 49 377-427 56-108 (261)
206 PRK04020 rps2P 30S ribosomal p 48.1 1E+02 0.0022 32.0 9.0 113 571-706 47-161 (204)
207 PRK03359 putative electron tra 47.9 54 0.0012 35.2 7.2 42 386-429 104-149 (256)
208 PF04230 PS_pyruv_trans: Polys 47.2 3.3E+02 0.0071 27.8 15.1 47 630-685 237-283 (286)
209 COG1647 Esterase/lipase [Gener 45.8 1.4E+02 0.003 31.6 9.3 44 380-425 70-113 (243)
210 KOG2452 Formyltetrahydrofolate 44.1 26 0.00056 39.9 4.1 45 268-343 1-45 (881)
211 TIGR00715 precor6x_red precorr 43.9 1.2E+02 0.0026 32.6 9.1 85 621-716 165-253 (256)
212 PF05686 Glyco_transf_90: Glyc 42.0 69 0.0015 36.6 7.3 82 675-760 234-319 (395)
213 PF09752 DUF2048: Uncharacteri 41.6 3.5E+02 0.0077 30.4 12.4 34 395-428 173-206 (348)
214 PRK13398 3-deoxy-7-phosphohept 40.3 3.4E+02 0.0074 29.3 11.9 111 564-686 28-142 (266)
215 PRK13932 stationary phase surv 40.1 4.1E+02 0.0089 28.6 12.3 34 394-427 89-133 (257)
216 PF05728 UPF0227: Uncharacteri 39.9 2.3E+02 0.0049 28.9 10.0 31 399-429 61-91 (187)
217 PRK06988 putative formyltransf 39.6 1.6E+02 0.0035 32.5 9.6 12 395-406 76-87 (312)
218 TIGR00087 surE 5'/3'-nucleotid 38.2 3.4E+02 0.0074 28.9 11.3 35 394-428 84-129 (244)
219 smart00672 CAP10 Putative lipo 37.7 1.6E+02 0.0035 31.5 8.9 48 709-760 203-250 (256)
220 PRK11519 tyrosine kinase; Prov 37.2 5.5E+02 0.012 31.8 14.6 46 383-428 622-669 (719)
221 PRK12342 hypothetical protein; 36.9 77 0.0017 34.0 6.2 34 396-429 109-146 (254)
222 KOG1021 Acetylglucosaminyltran 36.0 2.7E+02 0.0059 32.5 11.1 97 645-747 335-434 (464)
223 TIGR02990 ectoine_eutA ectoine 34.6 2.8E+02 0.0062 29.4 10.1 34 394-427 179-214 (239)
224 PF13407 Peripla_BP_4: Peripla 33.5 3E+02 0.0066 28.2 10.2 74 614-687 15-89 (257)
225 PF00731 AIRC: AIR carboxylase 32.7 5E+02 0.011 25.7 11.5 129 595-738 4-146 (150)
226 PF04392 ABC_sub_bind: ABC tra 29.4 3.1E+02 0.0068 29.5 9.7 86 613-705 146-235 (294)
227 PLN00016 RNA-binding protein; 29.2 47 0.001 37.3 3.3 20 307-330 71-90 (378)
228 TIGR00732 dprA DNA protecting 28.3 4E+02 0.0086 27.9 9.8 125 573-712 82-218 (220)
229 COG4567 Response regulator con 27.9 1.4E+02 0.003 29.7 5.6 54 663-716 63-123 (182)
230 PF03668 ATP_bind_2: P-loop AT 27.3 1.9E+02 0.004 31.7 7.2 123 168-329 123-280 (284)
231 PRK10840 transcriptional regul 27.1 6.5E+02 0.014 25.2 11.8 109 593-718 4-124 (216)
232 PRK04531 acetylglutamate kinas 27.0 1.6E+02 0.0035 33.8 7.0 57 559-632 35-92 (398)
233 PF03358 FMN_red: NADPH-depend 25.9 1E+02 0.0022 29.5 4.6 38 268-327 1-38 (152)
234 PLN03228 methylthioalkylmalate 25.8 3.7E+02 0.0081 31.9 9.9 109 122-247 18-143 (503)
235 PRK08057 cobalt-precorrin-6x r 25.7 3.3E+02 0.0072 29.1 8.8 34 655-688 191-225 (248)
236 PF10649 DUF2478: Protein of u 25.7 1.1E+02 0.0025 30.4 4.8 40 645-684 84-129 (159)
237 COG4195 Phage-related replicat 25.6 71 0.0015 32.5 3.3 32 268-312 37-68 (208)
238 cd01020 TroA_b Metal binding p 25.5 3.4E+02 0.0074 28.9 9.0 88 648-740 47-135 (264)
239 PRK13288 pyrophosphatase PpaX; 25.4 6.8E+02 0.015 25.2 10.9 120 572-714 83-210 (214)
240 TIGR01005 eps_transp_fam exopo 25.2 6.3E+02 0.014 31.3 12.5 27 184-212 454-480 (754)
241 PLN02657 3,8-divinyl protochlo 25.2 58 0.0013 37.0 3.2 52 250-330 43-94 (390)
242 COG3171 Uncharacterized protei 25.0 57 0.0012 30.4 2.4 32 221-252 25-60 (119)
243 COG1830 FbaB DhnA-type fructos 24.9 4.3E+02 0.0093 28.6 9.2 123 563-718 116-257 (265)
244 PRK13478 phosphonoacetaldehyde 24.4 7.2E+02 0.016 26.2 11.3 99 571-689 101-207 (267)
245 PRK13933 stationary phase surv 24.3 8.2E+02 0.018 26.3 11.4 34 394-427 85-129 (253)
246 COG0569 TrkA K+ transport syst 24.1 3.8E+02 0.0083 28.0 8.8 34 395-428 65-102 (225)
247 PRK10360 DNA-binding transcrip 23.8 6.6E+02 0.014 24.2 11.3 74 645-718 37-116 (196)
248 CHL00194 ycf39 Ycf39; Provisio 23.2 60 0.0013 35.4 2.7 33 268-329 1-33 (317)
249 COG2236 Predicted phosphoribos 23.0 1.6E+02 0.0034 30.3 5.4 46 375-421 9-54 (192)
250 PLN02770 haloacid dehalogenase 23.0 7.3E+02 0.016 25.9 10.9 112 572-703 109-226 (248)
251 PF03016 Exostosin: Exostosin 22.6 2E+02 0.0044 30.7 6.7 69 645-714 228-299 (302)
252 PF03308 ArgK: ArgK protein; 22.6 6E+02 0.013 27.5 9.8 110 292-429 41-154 (266)
253 PRK13935 stationary phase surv 22.5 9.8E+02 0.021 25.7 12.2 34 394-427 84-128 (253)
254 COG1618 Predicted nucleotide k 22.4 2.3E+02 0.005 28.6 6.2 72 645-718 92-175 (179)
255 COG2086 FixA Electron transfer 22.1 1.7E+02 0.0037 31.5 5.7 35 395-429 110-148 (260)
256 TIGR01470 cysG_Nterm siroheme 22.0 8.7E+02 0.019 24.9 14.9 136 581-743 23-166 (205)
257 PRK00676 hemA glutamyl-tRNA re 21.5 1.2E+03 0.025 26.2 13.6 125 591-739 173-305 (338)
258 TIGR01012 Sa_S2_E_A ribosomal 21.4 2.1E+02 0.0046 29.5 6.0 104 572-693 42-147 (196)
259 TIGR01162 purE phosphoribosyla 21.1 8.3E+02 0.018 24.3 11.6 121 596-734 3-140 (156)
260 PRK02122 glucosamine-6-phospha 21.0 1.2E+02 0.0025 37.2 4.7 106 197-329 291-408 (652)
261 cd03129 GAT1_Peptidase_E_like 20.5 8.6E+02 0.019 24.7 10.5 107 570-689 9-125 (210)
No 1
>PLN00142 sucrose synthase
Probab=100.00 E-value=1.7e-201 Score=1753.40 Aligned_cols=799 Identities=79% Similarity=1.279 Sum_probs=776.6
Q ss_pred CcchHHhHHHHhHHHHHHHHHHHhhcCCCceehhhHHHHHHHHhhhcccccccCCCcHHHHHhhcceeeeeCCeEEEEEc
Q 003726 1 MRDRVQDTLSVHRNELVSLLSRYAGKGKGILQRHHLTEEMDDIVKEDEGMQKLSKSPFMKVLQSAQEAIILPPFVVLAVR 80 (800)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~r 80 (800)
|+|+|+++|++|||+|++||+||+++||++||+|||+++|+++++++.++.++.+|+||++|++||||||.|||||||||
T Consensus 13 ~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~r 92 (815)
T PLN00142 13 IRERVPDALSQHRNELKALLSRYVAQGKGILQPHQLIDELEAVIDDDEERKKLLDGPFGDILRSTQEAIVLPPFVALAVR 92 (815)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHhhhhhhhhhhccCcHHHHHHhhhhhhccCCeeEEEEc
Confidence 58999999999999999999999999999999999999999998777778889999999999999999999999999999
Q ss_pred CCCceEEEEEEecCcceeeecCHHHHHhhhchhccCcCCCCceeeeecccccCCCCCCCCCCCCCchhhhhhhhhhhccc
Q 003726 81 PRPGVWEYVRVNVYELSVDRLNVAEYLKSKEELVEGQSGDNYVLELDLEPFNATFPRPTRSSSIGNGVQFLNRHLSSVMF 160 (800)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (800)
||||+|||||||++||+||+|||+|||+|||+|||++.+++++|||||+|||++|||||+||||||||+|||||||||||
T Consensus 93 ~~~~~~~~~~~~~~~l~~~~~~~~~yl~~ke~~~~~~~~~~~~le~d~~pf~~~~p~~~~~~~ig~g~~~~~~~~~~~~~ 172 (815)
T PLN00142 93 PRPGVWEYVRVNVSELSVEELTVSEYLKFKEELVDGSWNDNFVLELDFEPFNASFPRPTLSSSIGNGVQFLNRHLSSKLF 172 (815)
T ss_pred CCCcceEEEEEEhhhCceeeecHHHhhhhhHhhcCcccCCCceEEEecccccccCCCCCCcccccccHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999988999999999999999999999999999999999999999999
Q ss_pred CCCCCchhHHHHHhhcccCCeeeeccccCCCHHHHHHHHHHHHHHhhcCCCCCCchhhHHHhhccCCccccCchHHHHHH
Q 003726 161 RNKESLEPLLNFLRVHKHDGFVMMLNDRIQSISKLQSALQRAEEYLSKFLPDTPYSEFEFEIQGMGFERGWGDTAQRVSE 240 (800)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gwg~~~~~~~~ 240 (800)
+|+++++|||||||+|+|+|++|||||||+|+++||++|++|++||+++|+||||++|+++||+|||||||||||+||+|
T Consensus 173 ~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~g~~~gwg~~~~~~~~ 252 (815)
T PLN00142 173 RDKESLEPLLDFLRAHNHKGETLMLNDRIQTLSKLQSALRKAEEYLSKLPKDTPYSEFEHRFQELGLEKGWGDTAERVLE 252 (815)
T ss_pred cCchhhhhHHHHHHHhhcCCceeeecCCCCCHHHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHhCCCCCcCccHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCcchHhhhhccCCceeEEEEEccCcCCCCccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHCCCccc
Q 003726 241 MVHLLLDILQAPDPATLETFLGRIPMVFNVVIVSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIQNQGLDVI 320 (800)
Q Consensus 241 ~~~~l~~~~~~p~~~~l~~f~~~~p~~~rI~ivs~hg~~~~~~~lg~p~tGG~~vyild~araL~~eLa~~L~~~GheV~ 320 (800)
||++|+|+|++|||++||+|++||||+|||+|||+||||+|.+++|.||||||+|||+|||||||++|+++|+++||+|+
T Consensus 253 ~~~~l~~~~~~p~~~~~e~f~~~~p~~~~i~~iS~Hg~~~~~~~lG~~DtGGQ~vYVl~~aral~~el~~~l~~~G~~v~ 332 (815)
T PLN00142 253 TIHLLLDLLQAPDPSTLEKFLGRIPMVFNVVIFSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKQQGLDIK 332 (815)
T ss_pred HHHHHHHHHhCCChhHHHHHHhhhhHhHhhheecccccccccccCCCCCCCCceehHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeEEeCCCCCCCCCcccccceeecCCCCeEEEEeccCCCCccccccccccCChhhHHHHHHHHHHHHHHHhCCCceEE
Q 003726 321 PKILIVTRLIPDAKGTTCNQRLERISGTEHTHILRVPFRTENGILRKWISRFDVWPYLETFAEDASNEIAAELQGVPDLI 400 (800)
Q Consensus 321 ~~i~VvTr~~p~~~g~~~~~~~e~~~g~~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~ll~~~~~~PDII 400 (800)
|+|+|+||.+++..+++|+++.|.+.++++++|+|+||++.++++++|++|+.+|||++.|+.++.+.+.++.+++||+|
T Consensus 333 ~~v~i~TR~i~~~~~~~~~~~~e~v~~~~~~~I~rvP~g~~~~~l~~~i~ke~l~p~L~~f~~~~~~~~~~~~~~~PDlI 412 (815)
T PLN00142 333 PQILIVTRLIPDAKGTTCNQRLEKVSGTEHSHILRVPFRTEKGILRKWISRFDVWPYLETFAEDAASEILAELQGKPDLI 412 (815)
T ss_pred ceeEEEEeccCCccCCcccCcceeccCCCceEEEecCCCCCccccccccCHHHHHHHHHHHHHHHHHHHHHhcCCCCCEE
Confidence 99999999999999999999999999999999999999997789999999999999999999999999888777899999
Q ss_pred EECCCCchHHHHHHHhcCCCeEEEEecCCccccCCCChhhHHhhhhhhccchhhhHHHHHhccCCEEEecCHHHHhhccc
Q 003726 401 IGNYSDGNLVATLLSYKLGVTQCNIAHALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNNADFIITSTYQEIAGSKN 480 (800)
Q Consensus 401 h~h~~~~~lva~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ei~~~~~ 480 (800)
|+|||+++++|.++++++|+|+|+|+|++++.|+..++.+|+..+.+|++++|+++|.++|+.||+||++|+++++++++
T Consensus 413 HaHYwdsg~vA~~La~~lgVP~v~T~HsL~k~K~~~~~~~~~~~e~~y~~~~r~~aE~~a~~~Ad~IIasT~qEi~g~~~ 492 (815)
T PLN00142 413 IGNYSDGNLVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKFDDKYHFSCQFTADLIAMNHADFIITSTYQEIAGSKD 492 (815)
T ss_pred EECCccHHHHHHHHHHHhCCCEEEEcccchhhhccccCCcccccchhhhhhhchHHHHHHHHhhhHHHhCcHHHHhcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccccccccccccceeeeccCCCCCCceEEecCCCCCCCCCCCChHHHHHHHhhccccccccCCccccccccccCCCC
Q 003726 481 NVGQYENHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLYDPKQNDEHVGILNDRS 560 (800)
Q Consensus 481 ~~gqy~~~~~f~~p~l~~vv~Gi~v~~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~Gll~~~~ 560 (800)
.++||++|.+|+||+++++++|++++++|++|||||+|...|.|+.....+++.+|+.|++++|++.+.++++|++.+++
T Consensus 493 ~i~qy~sh~~f~~p~L~rvv~GId~~~~ki~VVppGvD~~~F~P~~~~~~rl~~l~n~I~~~l~~~~~~~e~lg~l~~~~ 572 (815)
T PLN00142 493 TVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEKQKRLTSLHPSIEELLYSPEQNDEHIGYLKDRK 572 (815)
T ss_pred hhhhhhcccccccchhhhhhccccccccCeeEECCCCChhhcCCCChHHhhHHhhcccchhhcCChHHHHHHhCCccCCC
Confidence 99999999999999999999999999999999999999999999998888899999999999999999999999887888
Q ss_pred CcEEEEEecCCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEcccccC
Q 003726 561 KPLIFSMARLDGVKNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISAQMN 640 (800)
Q Consensus 561 k~iIl~vGRL~~~Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~~~~ 640 (800)
+|+|+++||+++.||++.|++|++++.+.+++++|+|||++.++..+.+.++.++.++++++++++++.++|+|+|.+.+
T Consensus 573 kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~~~LVIVGgg~d~~~s~d~ee~~el~~L~~La~~lgL~~~V~flG~~~~ 652 (815)
T PLN00142 573 KPIIFSMARLDRVKNLTGLVEWYGKNKRLRELVNLVVVGGFIDPSKSKDREEIAEIKKMHSLIEKYNLKGQFRWIAAQTN 652 (815)
T ss_pred CcEEEEEecCcccCCHHHHHHHHHHHHHhCCCcEEEEEECCccccccccHHHHHHHHHHHHHHHHcCCCCcEEEcCCcCC
Confidence 99999999999999999999999999887889999999998655566677888888999999999999999999998887
Q ss_pred ccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHH
Q 003726 641 RVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEK 720 (800)
Q Consensus 641 ~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~ 720 (800)
..+.+++++++++++|+||+||++|+||++++||||||+|||||+.||+.|+|.||.+|++++|+|++++|++|.+++++
T Consensus 653 ~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~GlPVVATdvGG~~EIV~dG~tG~LV~P~D~eaLA~aI~~lLek 732 (815)
T PLN00142 653 RVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQGGPAEIIVDGVSGFHIDPYHGDEAANKIADFFEK 732 (815)
T ss_pred cccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHH
Confidence 88889999999976899999999999999999999999999999999999999999999999999999999999999988
Q ss_pred hcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhhhhhhhcHHhHHHhhhHHHHHHhhhccccccccccccccC
Q 003726 721 CYNDPSHWNKISDGGLKRIYERYTWKIYSERLLTLAGVYGFWKYVSKLDRRETRRYLEMFYILKFRDLAKSVRLAVDEQ 799 (800)
Q Consensus 721 l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (800)
|..|++.|++|+++|++++.++|||+.++++++++.++||||+++++++|+|++|||||||+||||+||++||+++|+.
T Consensus 733 Ll~Dp~lr~~mg~~Ar~rv~e~FSWe~~A~rll~L~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~ 811 (815)
T PLN00142 733 CKEDPSYWNKISDAGLQRIYECYTWKIYAERLLTLGGVYGFWKYVSKLERRETRRYLEMFYNLKFRELAKTVPLAVDDP 811 (815)
T ss_pred hcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcchhhhcchHhHHHHHHHHHHHHHhhhHHHhhcCCcccccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999864
No 2
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=100.00 E-value=9.6e-197 Score=1714.01 Aligned_cols=783 Identities=75% Similarity=1.227 Sum_probs=760.8
Q ss_pred HHHHHHHHHHHhhcCCCceehhhHHHHHHHHhhhcccccccCCCcHHHHHhhcceeeeeCCeEEEEEcCCCceEEEEEEe
Q 003726 13 RNELVSLLSRYAGKGKGILQRHHLTEEMDDIVKEDEGMQKLSKSPFMKVLQSAQEAIILPPFVVLAVRPRPGVWEYVRVN 92 (800)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~ 92 (800)
|++|++||+||+++||++||+|||+++|+++|.++.++.++.+|+||++|++||||||.|||||||||||||+|||||||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qe~~~~~~~~~~~~r~~~~~~~~~~~~ 80 (784)
T TIGR02470 1 RAELRQLLSRYVSQGKRYLLRHQLLDEFEQYCSDADKEKKLSESALGKLIFSTQEAIVLPPWVALAVRPRIGVWEYVRVN 80 (784)
T ss_pred ChHHHHHHHHHHhcCCCcccHHHHHHHHHHHhhhhhhhhhhccCcHHHHHHhhhhheecCCeeEEEEcCCCcceEEEEEE
Confidence 78999999999999999999999999999999776667889999999999999999999999999999999999999999
Q ss_pred cCcceeeecCHHHHHhhhchhccCcCCCCceeeeecccccCCCCCCCCCCCCCchhhhhhhhhhhcccCCCCCchhHHHH
Q 003726 93 VYELSVDRLNVAEYLKSKEELVEGQSGDNYVLELDLEPFNATFPRPTRSSSIGNGVQFLNRHLSSVMFRNKESLEPLLNF 172 (800)
Q Consensus 93 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (800)
++||+||+|||+|||+|||+|||++.+++++|||||+|||++||+||+||||||||+|||||||||||+|++++++||||
T Consensus 81 ~~~l~~~~~~~~~yl~~ke~~~~~~~~~~~~le~d~~pf~~~~p~~~~~~~ig~g~~~~~r~~s~~~~~~~~~~~~~~~~ 160 (784)
T TIGR02470 81 VEELSVEELTISEYLDFKEQLVNGHPNDGFVLELDFEPFNASFPRPSDSKSIGNGVQFLNRHLSSKLFQDPESMEPLLNF 160 (784)
T ss_pred hhhCceeeecHHHHhhhhHhhcCcccCCCceEEEecccccccCCCCCCcccccccHHHHHHHHHHHhcCCchhhhhHHHH
Confidence 99999999999999999999999988999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccCCeeeeccccCCCHHHHHHHHHHHHHHhhcCCCCCCchhhHHHhhccCCccccCchHHHHHHHHHHHHHhhcCC
Q 003726 173 LRVHKHDGFVMMLNDRIQSISKLQSALQRAEEYLSKFLPDTPYSEFEFEIQGMGFERGWGDTAQRVSEMVHLLLDILQAP 252 (800)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gwg~~~~~~~~~~~~l~~~~~~p 252 (800)
||.|+|+|++|||||||+|+++||+||++|++||+++|+||||++|+++||+|||||||||||+||+|||++|+|+|++|
T Consensus 161 l~~~~~~g~~~~~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~g~~~gwg~~~~~~~~~~~~l~~~~~~p 240 (784)
T TIGR02470 161 LRVHNYNGIQLMINDRIQSVSHLQSQLRKAEEFLSALPPDTPYSEFEFELQELGFEPGWGDTAQRVLETLHLLDDLLEAP 240 (784)
T ss_pred HHHhccCCceeeecCCCCCHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHhCCCCCcCccHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcchHhhhhccCCceeEEEEEccCcCCCCccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCC
Q 003726 253 DPATLETFLGRIPMVFNVVIVSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIQNQGLDVIPKILIVTRLIPD 332 (800)
Q Consensus 253 ~~~~l~~f~~~~p~~~rI~ivs~hg~~~~~~~lg~p~tGG~~vyild~araL~~eLa~~L~~~GheV~~~i~VvTr~~p~ 332 (800)
||++||+|++||||+|||+|||+|||++|.+++|.||||||+|||++|||+||++|+++|+++||+|+|+|+|+||.+++
T Consensus 241 ~~~~~e~f~~~~p~~~rIa~lS~Hg~~~~~~~lG~~DtGGq~vYV~elaraL~~~~~~~La~~G~~v~~~V~I~TR~~~~ 320 (784)
T TIGR02470 241 DPSVLEAFLGRIPMVFNVVILSPHGYFGQENVLGLPDTGGQVVYILDQVRALENEMLQRIKLQGLEITPKILIVTRLIPD 320 (784)
T ss_pred ChhHHHHHHhhCCccceEEEEecccccCCccccCCCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccccceeecCCCCeEEEEeccCCCCc-cccccccccCChhhHHHHHHHHHHHHHHHhCCCceEEEECCCCchHHH
Q 003726 333 AKGTTCNQRLERISGTEHTHILRVPFRTENG-ILRKWISRFDVWPYLETFAEDASNEIAAELQGVPDLIIGNYSDGNLVA 411 (800)
Q Consensus 333 ~~g~~~~~~~e~~~g~~~v~I~rvp~~~~~~-~~~~~isr~~i~~yl~~f~~~~~~~ll~~~~~~PDIIh~h~~~~~lva 411 (800)
..+++|+++.+.+.+++|++|+|+||++..+ ++++|++++.+|||++.|+.++.+.+.++.+++||+||+|||+++++|
T Consensus 321 ~~~~~~~~~~e~~~~~~~~~I~rvp~g~~~~~~~~~~i~k~~l~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva 400 (784)
T TIGR02470 321 AEGTTCNQRLEKVYGTEHAWILRVPFRTENGIILRNWISRFEIWPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVA 400 (784)
T ss_pred ccccccccccccccCCCceEEEEecCCCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHH
Confidence 9999999999999999999999999999877 799999999999999999999999988777789999999999999999
Q ss_pred HHHHhcCCCeEEEEecCCccccCCCChhhHHhhhhhhccchhhhHHHHHhccCCEEEecCHHHHhhcccCcccccccccc
Q 003726 412 TLLSYKLGVTQCNIAHALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNNADFIITSTYQEIAGSKNNVGQYENHTAF 491 (800)
Q Consensus 412 ~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ei~~~~~~~gqy~~~~~f 491 (800)
.++++++|+|+|+|+|++++.++..++.+|...+.+|++++++++|.++|+.||+|||+|++|++++++.++||++|..|
T Consensus 401 ~lla~~lgVP~v~t~HsL~~~K~~~~g~~~~~~e~~~~~~~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~qY~s~~~f 480 (784)
T TIGR02470 401 SLLARKLGVTQCTIAHALEKTKYPDSDIYWQEFEDKYHFSCQFTADLIAMNAADFIITSTYQEIAGTKDSVGQYESHQAF 480 (784)
T ss_pred HHHHHhcCCCEEEECCcchhhcccccccccccchhHHHhhhhhhHHHHHHhcCCEEEECcHHHhhhhhhhhhhhhhcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccceeeeccCCCCCCceEEecCCCCCCCCCCCChHHHHHHHhhccccccccCCccccccccccCCCCCcEEEEEecCC
Q 003726 492 TLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLYDPKQNDEHVGILNDRSKPLIFSMARLD 571 (800)
Q Consensus 492 ~~p~l~~vv~Gi~v~~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~Gll~~~~k~iIl~vGRL~ 571 (800)
+||++|++++|++++++|++|||||+|++.|+|++....+....++.+++++|++.+.++++|++.++++|+|+++||++
T Consensus 481 t~p~Ly~vvnGid~~~~Ki~VVpPGVD~~iF~P~~~~~~r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~ 560 (784)
T TIGR02470 481 TMPGLYRVVHGIDVFDPKFNIVSPGADESIYFPYSDKEKRLTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLD 560 (784)
T ss_pred cccceeeeecCccCCcCCeEEECCCcChhhcCCCCchhhhhhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCC
Confidence 99999999999999999999999999999999999888888888999999999999999999998889999999999999
Q ss_pred CCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEcccccCccChHHHHHHH
Q 003726 572 GVKNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISAQMNRVRNGELYRYI 651 (800)
Q Consensus 572 ~~Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~~~~~v~~~el~~~i 651 (800)
+.||++.|++|++++++++++++|+|||++..+..+.+.++.++.++++++++++++.++|+|+|.+.+.....++|+++
T Consensus 561 ~~KGid~LIeA~~~l~~l~~~~~LVIVGGg~~~~~s~d~ee~~~i~~L~~la~~~gL~g~V~flG~~~~~~~~~elyr~i 640 (784)
T TIGR02470 561 RVKNLTGLVECYGRSPKLRELVNLVVVAGKLDAKESKDREEQAEIEKMHNLIDQYQLHGQIRWIGAQLNRVRNGELYRYI 640 (784)
T ss_pred ccCCHHHHHHHHHHhHhhCCCeEEEEEeCCcccccccchhHHHHHHHHHHHHHHhCCCCeEEEccCcCCcccHHHHHHHh
Confidence 99999999999999877778899999999887677888888899999999999999999999999876677788999999
Q ss_pred HccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHH
Q 003726 652 ADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKI 731 (800)
Q Consensus 652 a~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~m 731 (800)
++++|+||+||++|+||++++||||||+|||||+.||+.|+|.+|.+|++++|+|++++|++|.+++++|..||+.|++|
T Consensus 641 Ad~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~GG~~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~m 720 (784)
T TIGR02470 641 ADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKI 720 (784)
T ss_pred hccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 87789999999999999999999999999999999999999999999999999999999999999998899999999999
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHhhhhhhhcHHhHHHhhhHHHHHHhhhccccccccccc
Q 003726 732 SDGGLKRIYERYTWKIYSERLLTLAGVYGFWKYVSKLDRRETRRYLEMFYILKFRDLAKSVRLA 795 (800)
Q Consensus 732 s~~a~~~v~~~ysw~~~a~~ll~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 795 (800)
+++|++++.++|||+.++++++++.++||||+++++++|++++|||||||+|+|||||++||++
T Consensus 721 s~~a~~rV~~~FSW~~~A~~ll~l~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 784 (784)
T TIGR02470 721 SQGGLQRIYEKYTWKIYSERLLTLAGIYGFWKFVSKLEREETRRYLEMFYHLKYRPLAEAVPLA 784 (784)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhhhhHhhhccHHHHHHHHHHHHHHHHhhhHHHHhhccCC
Confidence 9999999999999999999999999999999999999999999999999999999999999975
No 3
>PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2.4.1.13 from EC in the following reaction: UDP-glucose + D-fructose = UDP + sucrose This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family IPR001296 from INTERPRO. This enzyme is found mainly in plants but also appears in bacteria.; GO: 0005985 sucrose metabolic process; PDB: 2R60_A 2R66_A 2R68_A 3S27_G 3S29_A 3S28_A.
Probab=100.00 E-value=5.1e-173 Score=1407.43 Aligned_cols=545 Identities=73% Similarity=1.170 Sum_probs=475.7
Q ss_pred CcchHHhHHHHhHHHHHHHHHHHhhcCCCceehhhHHHHHHHHhhhcccccccCCCcHHHHHhhcceeeeeCCeEEEEEc
Q 003726 1 MRDRVQDTLSVHRNELVSLLSRYAGKGKGILQRHHLTEEMDDIVKEDEGMQKLSKSPFMKVLQSAQEAIILPPFVVLAVR 80 (800)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~r 80 (800)
|||+|+++|++||++|++||+||+++||+|||||||+++|+++|+++.++.++.+|+||++|++||||||.|||||||||
T Consensus 6 ~~e~~~~~L~~~R~~l~~llsr~~~~gk~~l~r~~ll~ef~~~~~~~~~~~~~~~g~lg~ll~~tQEaIv~pp~v~lavR 85 (550)
T PF00862_consen 6 IRERVPDTLSQHRNELKRLLSRYVAQGKRYLLRHDLLDEFEAYCEDDKEKLFLLSGPLGELLRSTQEAIVLPPWVALAVR 85 (550)
T ss_dssp --GGGTTTGGGTTSHHHHHHHHHHHHHTSSEEEECHHHHHTHHHHSTTTGCCT--STHHHHHHTEEEEEECSSEEEEEEE
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHcCcccccHHHHHHHHHHHHhcccchhhcccchHHHHHHhcceeEecCCeEEEEEc
Confidence 68999999999999999999999999999999999999999999777777888999999999999999999999999999
Q ss_pred CCCceEEEEEEecCcceeeecCHHHHHhhhchhccCcCCCCceeeeecccccCCCCCCCCCCCCCchhhhhhhhhhhccc
Q 003726 81 PRPGVWEYVRVNVYELSVDRLNVAEYLKSKEELVEGQSGDNYVLELDLEPFNATFPRPTRSSSIGNGVQFLNRHLSSVMF 160 (800)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (800)
||||+|||||||+++|+||+|||+|||+|||+|||++++++++|||||+|||++||+|++||||||||+|||||||||||
T Consensus 86 Prpg~WeyvRv~~~~L~vE~ltvseyL~fKE~LV~~~~~~~~vLElDf~PFn~~~Prlt~s~sIGnGv~FLNR~LSsklf 165 (550)
T PF00862_consen 86 PRPGVWEYVRVNVDDLSVEELTVSEYLKFKERLVDGSANDEFVLELDFEPFNASFPRLTDSSSIGNGVQFLNRHLSSKLF 165 (550)
T ss_dssp EETTEEEEEEEESSSSEEEEE-HHHHHHHHHHHHHSS-SSTTS-EEE-GGGHTTS----SGGGTTBHHHHHHHHHHHHHT
T ss_pred CCCccEEEEEEEhhhCcceecCHHHHHHHHHHHcCCccCCCCeeeeecccccccCCCCCCcccccccHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCchhHHHHHhhcccCCeeeeccccCCCHHHHHHHHHHHHHHhhcCCCCCCchhhHHHhhccCCccccCchHHHHHH
Q 003726 161 RNKESLEPLLNFLRVHKHDGFVMMLNDRIQSISKLQSALQRAEEYLSKFLPDTPYSEFEFEIQGMGFERGWGDTAQRVSE 240 (800)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gwg~~~~~~~~ 240 (800)
+|++++++||+|||.|+|+|++|||||||+|+++||+||++|++||+++|+||||++|+++||+|||||||||||+||+|
T Consensus 166 ~d~e~~~~Ll~fL~~h~~~G~~Lmlndri~s~~~L~~aL~~A~~~L~~~p~~tpy~~f~~~~q~~Gfe~GWG~ta~rv~e 245 (550)
T PF00862_consen 166 QDKESLEPLLDFLRVHNYNGQQLMLNDRIQSVSKLQSALRKAEEFLSKLPPDTPYSEFEHKLQELGFEPGWGDTAERVLE 245 (550)
T ss_dssp T-HHHHHHHHHHHHH-EETTEEBSB-TT--SHHHHHHHHHHHHHHHHHS-TT-BHHHHHHHHHHHTB-B-S-SBHHHHHH
T ss_pred CChHHHHHHHHHHHHhccCCeEeeecCCCCCHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCcchHhhhhccCCceeEEEEEccCcCCCCccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHCCCccc
Q 003726 241 MVHLLLDILQAPDPATLETFLGRIPMVFNVVIVSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIQNQGLDVI 320 (800)
Q Consensus 241 ~~~~l~~~~~~p~~~~l~~f~~~~p~~~rI~ivs~hg~~~~~~~lg~p~tGG~~vyild~araL~~eLa~~L~~~GheV~ 320 (800)
||++|+|+|+||||++||+|++||||+|+||++||||||+|+||+|+||||||++||+|||||||++|..+++.+|.+|.
T Consensus 246 t~~lL~dll~aPdp~~LE~Fl~RiPmvf~vvliSpHG~f~q~nvLG~pDTGGQVvYVleqarALe~e~~~ri~~~gl~i~ 325 (550)
T PF00862_consen 246 TMHLLSDLLEAPDPSTLEKFLSRIPMVFNVVLISPHGYFGQENVLGRPDTGGQVVYVLEQARALENEMLYRIKLQGLDIT 325 (550)
T ss_dssp HHHHHHHHHHS--HHHHHHHHHHS---SEEEEE--SS--STTSTTSSTTSSHHHHHHHHHHHHHHHHTHHHHHHTT----
T ss_pred HHHHHHHHHhCCCchHHHHHhhhcceeEEEEEEcCccccccccccCCCCCCCcEEEEeHHHHHHHHHHHHHHHhcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeEEeCCCCCCCCCcccccceeecCCCCeEEEEeccCCCCccccccccccCChhhHHHHHHHHHHHHHHHhCCCceEE
Q 003726 321 PKILIVTRLIPDAKGTTCNQRLERISGTEHTHILRVPFRTENGILRKWISRFDVWPYLETFAEDASNEIAAELQGVPDLI 400 (800)
Q Consensus 321 ~~i~VvTr~~p~~~g~~~~~~~e~~~g~~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~ll~~~~~~PDII 400 (800)
|+|+|+||.+|++.|++|+++++++.|++|++|+|+||++.+|++++|+||+.+|||++.|+.++..++.++++++||+|
T Consensus 326 p~i~i~TRlIpd~~~t~~~q~le~~~gt~~a~IlRvPF~~~~gi~~kwisrf~lWPyLe~fa~d~~~~i~~e~~~~PdlI 405 (550)
T PF00862_consen 326 PKIDIVTRLIPDAKGTTCNQRLEKVSGTENARILRVPFGPEKGILRKWISRFDLWPYLEEFADDAEREILAELQGKPDLI 405 (550)
T ss_dssp -EEEEEEE--TBTTCGGGTSSEEEETTESSEEEEEE-ESESTEEE-S---GGG-GGGHHHHHHHHHHHHHHHHTS--SEE
T ss_pred CceeeecccccCCcCCCccccccccCCCCCcEEEEecCCCCcchhhhccchhhchhhHHHHHHHHHHHHHHHhCCCCcEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EECCCCchHHHHHHHhcCCCeEEEEecCCccccCCCChhhHHhhhhhhccchhhhHHHHHhccCCEEEecCHHHHhhccc
Q 003726 401 IGNYSDGNLVATLLSYKLGVTQCNIAHALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNNADFIITSTYQEIAGSKN 480 (800)
Q Consensus 401 h~h~~~~~lva~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ei~~~~~ 480 (800)
|+||+|||++|+++++++|+|+|+|+|+++++||+.++++|++++.+|||+|||+||.++|++||+|||||+|||+++++
T Consensus 406 ~GnYsDgnlvA~LLs~~lgv~~~~iaHsLek~Ky~~s~~~w~e~e~~Yhfs~qftAd~iamn~adfIItST~QEI~g~~~ 485 (550)
T PF00862_consen 406 IGNYSDGNLVASLLSRKLGVTQCFIAHSLEKTKYEDSDLYWKEIEEKYHFSCQFTADLIAMNAADFIITSTYQEIAGQKD 485 (550)
T ss_dssp EEEHHHHHHHHHHHHHHHT-EEEEE-SS-HHHHHHTTTTTSHHHHHHH-HHHHHHHHHHHHHHSSEEEESSHHHHHB-SS
T ss_pred EeccCcchHHHHHHHhhcCCceehhhhccccccccccCCCHHHHHhhccchhhhhHHHHHhhcCCEEEEcchHhhcCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccccccccccccceeeeccCCCCCCceEEecCCCCCCCCCCCChHHHHHHHhhccccccccC
Q 003726 481 NVGQYENHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLYD 545 (800)
Q Consensus 481 ~~gqy~~~~~f~~p~l~~vv~Gi~v~~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~ 545 (800)
++|||++|.+||||+||++++||++|+|||+|||||+|.++|+|++++++|++++|++||++||+
T Consensus 486 ~~gqyes~~~ftlpgLyrvv~Gi~vFdPkfNiv~PGad~~iyFpyt~~~~Rl~~~~~~ie~Llfs 550 (550)
T PF00862_consen 486 TVGQYESHKAFTLPGLYRVVNGIDVFDPKFNIVSPGADESIYFPYTEKERRLTSLHPEIEELLFS 550 (550)
T ss_dssp SBHTTGGGSSEEETTTEEEEES--TT-TTEEE------TTTS--TT-TTTS-GGGHHHHHHHHH-
T ss_pred ccCCccchhhcchHhHHhhhccccccCCcccccCCCCCcceecCCccccccchhhhHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999974
No 4
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=100.00 E-value=2e-61 Score=537.80 Aligned_cols=494 Identities=42% Similarity=0.649 Sum_probs=437.1
Q ss_pred eccccCCCHHHHHHHHHHHHHHhhcCCCCCCchhhHHHhhccCCccccCchHHHHHHHHHHHHHhhcCCCcchHhhhhcc
Q 003726 184 MLNDRIQSISKLQSALQRAEEYLSKFLPDTPYSEFEFEIQGMGFERGWGDTAQRVSEMVHLLLDILQAPDPATLETFLGR 263 (800)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gwg~~~~~~~~~~~~l~~~~~~p~~~~l~~f~~~ 263 (800)
|+||++++.+.+|+++.+|+..++.. .+||+..|.+.++..++++|||.++.+|.+++++++
T Consensus 1 ~~~~~~~~~~~~qk~~~~~m~~~~~~-~~t~~~~~~~~~~~~~~~~~gg~er~~v~~~~~l~s----------------- 62 (495)
T KOG0853|consen 1 MTNDSSSNISELQKVLWKAMIEKSLL-VSTPEKPFEHVTFIHPDLGIGGAERLVVDAAVHLLS----------------- 62 (495)
T ss_pred CcchhhhHHHHhhhhhhhhhhhhhcc-cccccccchhheeeccccccCchHHHhHHHHHHHHh-----------------
Confidence 78999999999999999999999999 999999999999999999999999999999999998
Q ss_pred CCceeEEEEEccCcCCCCccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCcccccce
Q 003726 264 IPMVFNVVIVSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIQNQGLDVIPKILIVTRLIPDAKGTTCNQRLE 343 (800)
Q Consensus 264 ~p~~~rI~ivs~hg~~~~~~~lg~p~tGG~~vyild~araL~~eLa~~L~~~GheV~~~i~VvTr~~p~~~g~~~~~~~e 343 (800)
++. +||.||+||+++|+++++++|+.+|..+..+.+.++++.|.|++...|...| +..+
T Consensus 63 ----------------~~~-~lg~~d~G~qV~~l~~h~~al~~~~~~~~~~~~l~~~~~i~vv~~~lP~~~~----~~~~ 121 (495)
T KOG0853|consen 63 ----------------GQD-VLGLPDTGGQVVYLTSHEDALEMPLLLRCFAETLDGTPPILVVGDWLPRAMG----QFLE 121 (495)
T ss_pred ----------------ccc-ccCCCCCCceEEEEehhhhhhcchHHHHHHHHHhcCCCceEEEEeecCcccc----hhhh
Confidence 555 8999999999999999999999999999999999999999999999998865 4566
Q ss_pred eecCCCCeEEEEeccCCCCccccccccccCChhhHHHHHHHHHHHHHHHhCCCceEEEECCCCchHHHHHHHhcCCCeEE
Q 003726 344 RISGTEHTHILRVPFRTENGILRKWISRFDVWPYLETFAEDASNEIAAELQGVPDLIIGNYSDGNLVATLLSYKLGVTQC 423 (800)
Q Consensus 344 ~~~g~~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~ll~~~~~~PDIIh~h~~~~~lva~lla~~~gip~v 423 (800)
...++.+++|+++|+ +++.+|+ +.+|+++..|+ .+...+.+.+++ ||++|.++|+++..+.+++.+.|++.+
T Consensus 122 ~~~~~~~~~il~~~~----~~~~k~~--~~~d~~i~d~~-~~~~~l~~~~~~-p~~~~~i~~~~h~~~~lla~r~g~~~~ 193 (495)
T KOG0853|consen 122 QVAGCAYLRILRIPF----GILFKWA--EKVDPIIEDFV-SACVPLLKQLSG-PDVIIKIYFYCHFPDSLLAKRLGVLKV 193 (495)
T ss_pred hhhccceeEEEEecc----chhhhhh--hhhceeecchH-HHHHHHHHHhcC-CcccceeEEeccchHHHhccccCccce
Confidence 667778999999998 3456677 78999998888 566677777766 999999999999999999999999999
Q ss_pred EEecCCccccCCCChhhHHhhhhhhccchhhhHHHHHhccCCEEEecCHHHHhhcccCcccccccccccccc-ceeeecc
Q 003726 424 NIAHALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNNADFIITSTYQEIAGSKNNVGQYENHTAFTLPG-LYRVVHG 502 (800)
Q Consensus 424 ~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ei~~~~~~~gqy~~~~~f~~p~-l~~vv~G 502 (800)
++.|.++..+++..+.+|+.+...|++.++|+++...|+++| ++++++++++.....++|+++..+++|. .++.+++
T Consensus 194 l~~~~l~~~e~e~~~~~~~~~~ns~~~~~~f~~~~~~L~~~d--~~~~y~ei~~s~~~~~~~~~~~~~~~~~r~~~~v~~ 271 (495)
T KOG0853|consen 194 LYRHALDKIEEETTGLAWKILVNSYFTKRQFKATFVSLSNSD--ITSTYPEIDGSWFTYGQYESHLELRLPVRLYRGVSG 271 (495)
T ss_pred eehhhhhhhhhhhhhccceEecchhhhhhhhhhhhhhcCCCC--cceeeccccchhccccccccchhcccccceeeeecc
Confidence 999999999999999999999999999999999999999999 9999999999999999999999999999 8999999
Q ss_pred CCCCCCceEEecCCCCCCCCCCCChHHHHHHHhhccccccccCCccccccccccCCCCCcEEEEEecCCCCCCHHHHHHH
Q 003726 503 IDVFDPKFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLYDPKQNDEHVGILNDRSKPLIFSMARLDGVKNLTGLVEC 582 (800)
Q Consensus 503 i~v~~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA 582 (800)
++++.++++.++||.|.+.+.+ +.+.+|+.|.+
T Consensus 272 ~d~~~~siN~~~pgkd~~l~l~------a~~~~~~~i~~----------------------------------------- 304 (495)
T KOG0853|consen 272 IDRFFPSINRFEPGKDQDLALP------AFTLLHDSIPE----------------------------------------- 304 (495)
T ss_pred cceEeeeeeecCCCCCceeehh------hHHhhhcccCC-----------------------------------------
Confidence 9999999999999999998877 22222221111
Q ss_pred HHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEcccccCccChHHHHHHHHccCcEEEecC
Q 003726 583 YGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISAQMNRVRNGELYRYIADTRGVFVQPA 662 (800)
Q Consensus 583 ~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS 662 (800)
...++.+++++|+.. .++.+.|+.++..+|+++++++++.++++|.-. .....+.|++++++..+|++|+
T Consensus 305 -----~~~~~~hl~~~g~~G--~d~~~sen~~~~~el~~lie~~~l~g~~v~~~~---s~~~~~~yrl~adt~~v~~qPa 374 (495)
T KOG0853|consen 305 -----PSISSEHLVVAGSRG--YDERDSENVEYLKELLSLIEEYDLLGQFVWFLP---STTRVAKYRLAADTKGVLYQPA 374 (495)
T ss_pred -----CCCCceEEEEecCCC--ccccchhhHHHHHHHHHHHHHhCccCceEEEec---CCchHHHHHHHHhcceEEecCC
Confidence 112345666666221 447889999999999999999999766665532 3345667999999889999999
Q ss_pred CCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh
Q 003726 663 FYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYER 742 (800)
Q Consensus 663 ~~E~fGl~vlEAMA~GlPVIAT~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ 742 (800)
. |.||+|++|||+||+|||||+.||+.|+|.++.+|++++| +.+ ....+.+++.+|..||++|.+|+++|++++.+.
T Consensus 375 ~-E~FGiv~IEAMa~glPvvAt~~GGP~EiV~~~~tG~l~dp-~~e-~~~~~a~~~~kl~~~p~l~~~~~~~G~~rV~e~ 451 (495)
T KOG0853|consen 375 N-EHFGIVPIEAMACGLPVVATNNGGPAEIVVHGVTGLLIDP-GQE-AVAELADALLKLRRDPELWARMGKNGLKRVKEM 451 (495)
T ss_pred C-CCccceeHHHHhcCCCEEEecCCCceEEEEcCCcceeeCC-chH-HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 9 9999999999999999999999999999999999999999 444 333333444666799999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHhhhhhhhcHHhHHHhhhHHHHHHhhhcc
Q 003726 743 YTWKIYSERLLTLAGVYGFWKYVSKLDRRETRRYLEMFYILKFR 786 (800)
Q Consensus 743 ysw~~~a~~ll~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 (800)
|||+.+.+++.++...|.+|+.++...+.+.+||++|||+|.||
T Consensus 452 fs~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 495 (495)
T KOG0853|consen 452 FSWQHYSERIASVLGKYLQWEKVSSLDSLEDRRYISLFYALSFR 495 (495)
T ss_pred HhHHHHHHHHHHHhHhcCCcccccccccccccccHHHHHHhhcC
Confidence 99999999999999999999999999999999999999999986
No 5
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=100.00 E-value=1.4e-58 Score=553.86 Aligned_cols=454 Identities=27% Similarity=0.469 Sum_probs=353.2
Q ss_pred eeEEEEEccCcCCCCccC-CC-CCCCCchHHHHHHHHHHHHHHHHHHHHHCC--CccccceeEEeCCCCCC-CCCccccc
Q 003726 267 VFNVVIVSPHGYFGQANV-LG-LPDTGGQVVYILDQVRALENEMLLRIQNQG--LDVIPKILIVTRLIPDA-KGTTCNQR 341 (800)
Q Consensus 267 ~~rI~ivs~hg~~~~~~~-lg-~p~tGG~~vyild~araL~~eLa~~L~~~G--heV~~~i~VvTr~~p~~-~g~~~~~~ 341 (800)
-|.|++||+||.|..+++ +| .+|||||++||. +||++|++.| |+|+ |+||.+.+. .+.+|.++
T Consensus 169 ~~~I~liS~HG~~~~~~~elg~~~DtGGq~vYV~--------ELAraLa~~~gv~~Vd----l~TR~~~~~~~~~~y~~p 236 (1050)
T TIGR02468 169 KLYIVLISLHGLVRGENMELGRDSDTGGQVKYVV--------ELARALGSMPGVYRVD----LLTRQVSSPDVDWSYGEP 236 (1050)
T ss_pred ceEEEEEccccCccccCcccCCCCCCCChHHHHH--------HHHHHHHhCCCCCEEE----EEeCCcCccccccccCCc
Confidence 478999999999988877 88 599999999999 4555568888 7898 999998653 35567777
Q ss_pred ceee------------cCCCCeEEEEeccCCCCccccccccccCChhhHHHHHHHHHHHHHHH-------h----CCCce
Q 003726 342 LERI------------SGTEHTHILRVPFRTENGILRKWISRFDVWPYLETFAEDASNEIAAE-------L----QGVPD 398 (800)
Q Consensus 342 ~e~~------------~g~~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~ll~~-------~----~~~PD 398 (800)
.|.+ ...+|++|+|+|+++..+ ++++..+|||+..|...+...+.+. . ...||
T Consensus 237 ~e~~~~~~~~~~~~~~~~~~g~rIvRip~GP~~~----~l~Ke~L~~~l~ef~d~~l~~~~~~~~~~~~~~~~~~~~~pD 312 (1050)
T TIGR02468 237 TEMLTPRSSENDGDEMGESSGAYIIRIPFGPRDK----YIPKEELWPYIPEFVDGALSHIVNMSKVLGEQIGSGHPVWPY 312 (1050)
T ss_pred cccccccccccccccccCCCCeEEEEeccCCCCC----CcCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCC
Confidence 6433 344699999999998643 5788999999999999888776531 1 12499
Q ss_pred EEEECCCCchHHHHHHHhcCCCeEEEEecCCccccCC----CChhhHHhhhhhhccchhhhHHHHHhccCCEEEecCHHH
Q 003726 399 LIIGNYSDGNLVATLLSYKLGVTQCNIAHALEKTKYP----DSDLYWRKFEEKYHFSSQFTADLTAMNNADFIITSTYQE 474 (800)
Q Consensus 399 IIh~h~~~~~lva~lla~~~gip~v~t~H~l~~~~~~----~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~e 474 (800)
|||+|||+++.++.++++.+|+|+|+|.|++...++. .+...+......|++..++.+|..+++.||.|||+|.++
T Consensus 313 vIHaHyw~sG~aa~~L~~~lgVP~V~T~HSLgr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIasT~qE 392 (1050)
T TIGR02468 313 VIHGHYADAGDSAALLSGALNVPMVLTGHSLGRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVITSTRQE 392 (1050)
T ss_pred EEEECcchHHHHHHHHHHhhCCCEEEECccchhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEEEeCHHH
Confidence 9999999999999999999999999999999766643 223345566778888999999999999999999999999
Q ss_pred HhhcccCccccccccccccccceee-----eccCC---CCCCceEEecCCCCCCCCCCCChHHHHHHHhhccccccccCC
Q 003726 475 IAGSKNNVGQYENHTAFTLPGLYRV-----VHGID---VFDPKFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLYDP 546 (800)
Q Consensus 475 i~~~~~~~gqy~~~~~f~~p~l~~v-----v~Gi~---v~~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~ 546 (800)
++. ||..|.+|. |.++++ ..|+. .+.+|+.|||||+|.+.|.|......+... ..++.....
T Consensus 393 ~~e------q~~lY~~~~-~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~---~~~~~~~~~ 462 (1050)
T TIGR02468 393 IEE------QWGLYDGFD-VILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETE---GNEEHPAKP 462 (1050)
T ss_pred HHH------HHHHhccCC-chhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHccCCCccccchhc---ccccccccc
Confidence 873 454444444 444333 33433 346799999999999999986432211000 000000000
Q ss_pred cc----ccccccccCCCCCcEEEEEecCCCCCCHHHHHHHHHHhhccCC--CeEEEEEeccCCCCCccchHHHHHHHHHH
Q 003726 547 KQ----NDEHVGILNDRSKPLIFSMARLDGVKNLTGLVECYGKSSKLRE--LVNLVVVGGYMDVKNSRDREEMAEIEKMH 620 (800)
Q Consensus 547 ~~----~~~~~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~l~~~~~--~v~LvIVG~g~~~~~~~~~e~~~~~~~l~ 620 (800)
.. .-..++ .++++|+|+++||+++.||++.|++|++++.+..+ ++. +|+|++++. .....+...+...+.
T Consensus 463 ~~~~~~~l~r~~--~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~nL~-LIiG~gdd~-d~l~~~~~~~l~~L~ 538 (1050)
T TIGR02468 463 DPPIWSEIMRFF--TNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDDI-DEMSSGSSSVLTSVL 538 (1050)
T ss_pred cchhhHHHHhhc--ccCCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCCCEE-EEEecCchh-hhhhccchHHHHHHH
Confidence 00 001122 26788999999999999999999999999875433 444 466776541 111111234567788
Q ss_pred HHHHHcCCCCcEEEcccccCccChHHHHHHHHcc---CcEEEecCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCc
Q 003726 621 GLIKQYNLHGQFRWISAQMNRVRNGELYRYIADT---RGVFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGV 697 (800)
Q Consensus 621 ~li~~~gL~~~V~flG~~~~~v~~~el~~~ia~a---advfV~PS~~E~fGl~vlEAMA~GlPVIAT~~GG~~EiI~dg~ 697 (800)
++++++++.++|.|+| .++.+++..+|..+ +|+||+||++|+||++++||||||+|||||+.||+.|+|.++.
T Consensus 539 ~li~~lgL~g~V~FlG----~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG~~EII~~g~ 614 (1050)
T TIGR02468 539 KLIDKYDLYGQVAYPK----HHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGPVDIHRVLD 614 (1050)
T ss_pred HHHHHhCCCCeEEecC----CCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCCcHHHhccCC
Confidence 9999999999999999 55668888888752 2799999999999999999999999999999999999999999
Q ss_pred eEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 003726 698 SGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLTLAGVY 759 (800)
Q Consensus 698 ~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~~ 759 (800)
+|++++|.|++++|++|..++ .|++.|++|+++|++++ ++|||+.++++|++.+...
T Consensus 615 nGlLVdP~D~eaLA~AL~~LL----~Dpelr~~m~~~gr~~v-~~FSWe~ia~~yl~~i~~~ 671 (1050)
T TIGR02468 615 NGLLVDPHDQQAIADALLKLV----ADKQLWAECRQNGLKNI-HLFSWPEHCKTYLSRIASC 671 (1050)
T ss_pred cEEEECCCCHHHHHHHHHHHh----hCHHHHHHHHHHHHHHH-HHCCHHHHHHHHHHHHHHH
Confidence 999999999999999997776 89999999999999998 5799999999999988765
No 6
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=100.00 E-value=3.3e-51 Score=466.64 Aligned_cols=424 Identities=32% Similarity=0.563 Sum_probs=315.4
Q ss_pred eEEEEEccCcCCCCcc-CCCC-CCCCchHHHHHHHHHHHHHHHHHHHHHCCC--ccccceeEEeCCCCCCC-CCcccccc
Q 003726 268 FNVVIVSPHGYFGQAN-VLGL-PDTGGQVVYILDQVRALENEMLLRIQNQGL--DVIPKILIVTRLIPDAK-GTTCNQRL 342 (800)
Q Consensus 268 ~rI~ivs~hg~~~~~~-~lg~-p~tGG~~vyild~araL~~eLa~~L~~~Gh--eV~~~i~VvTr~~p~~~-g~~~~~~~ 342 (800)
+||+++|+||+++|.+ ++|. |+.||+++|+. +|+++|+++|| +|+ |+|+.++... ++.+....
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~p~~GG~~~~v~--------~La~~L~~~G~~~~V~----v~t~~~~~~~~~~~~~~~~ 68 (439)
T TIGR02472 1 LYLLLLSLHGLIRGHDLELGRDADTGGQTKYVL--------ELARALARRSEVEQVD----LVTRLIKDAKVSPDYAQPI 68 (439)
T ss_pred CeEEEEeCCcCCCCCccccCCCCCCCCcchHHH--------HHHHHHHhCCCCcEEE----EEeccccCcCCCCccCCCe
Confidence 4799999999999998 6775 99999999999 66667799997 899 9998765431 12333333
Q ss_pred eeecCCCCeEEEEeccCCCCccccccccccCChhhHHHHHHHHHHHHHHHhCCCceEEEECCCCchHHHHHHHhcCCCeE
Q 003726 343 ERISGTEHTHILRVPFRTENGILRKWISRFDVWPYLETFAEDASNEIAAELQGVPDLIIGNYSDGNLVATLLSYKLGVTQ 422 (800)
Q Consensus 343 e~~~g~~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~ll~~~~~~PDIIh~h~~~~~lva~lla~~~gip~ 422 (800)
+.. .+|+.|+|+|+.+. .+.++...++|+..|...+.+.+ ++...+|||||+|++.++.++.++++..++|+
T Consensus 69 ~~~--~~gv~v~r~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~DvIH~h~~~~~~~~~~~~~~~~~p~ 140 (439)
T TIGR02472 69 ERI--APGARIVRLPFGPR-----RYLRKELLWPYLDELADNLLQHL-RQQGHLPDLIHAHYADAGYVGARLSRLLGVPL 140 (439)
T ss_pred eEe--CCCcEEEEecCCCC-----CCcChhhhhhhHHHHHHHHHHHH-HHcCCCCCEEEEcchhHHHHHHHHHHHhCCCE
Confidence 322 34799999997643 23445567788777665555543 33234799999999988899999999999999
Q ss_pred EEEecCCccccCC---CChhhHHhhhhhhccchhhhHHHHHhccCCEEEecCHHHHhhcccCccccccccccccccceee
Q 003726 423 CNIAHALEKTKYP---DSDLYWRKFEEKYHFSSQFTADLTAMNNADFIITSTYQEIAGSKNNVGQYENHTAFTLPGLYRV 499 (800)
Q Consensus 423 v~t~H~l~~~~~~---~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ei~~~~~~~gqy~~~~~f~~p~l~~v 499 (800)
|+|.|+....... ........+...|++......++.+++.+|.||++|.+++.. ++ ..
T Consensus 141 V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~------~~------------~~ 202 (439)
T TIGR02472 141 IFTGHSLGREKRRRLLAAGLKPQQIEKQYNISRRIEAEEETLAHASLVITSTHQEIEE------QY------------AL 202 (439)
T ss_pred EEecccccchhhhhcccCCCChhhhhhhcchHHHHHHHHHHHHhCCEEEECCHHHHHH------HH------------Hh
Confidence 9999986432210 111112222333444444456788999999999999765441 01 11
Q ss_pred eccCCCCCCceEEecCCCCCCCCCCCChHHHH--HHHhhccccccccCCccccccccccCCCCCcEEEEEecCCCCCCHH
Q 003726 500 VHGIDVFDPKFNIVSPGADMCIYFPYSDKEKR--LIALHGQIEDLLYDPKQNDEHVGILNDRSKPLIFSMARLDGVKNLT 577 (800)
Q Consensus 500 v~Gi~v~~~k~~VIpnGvD~~~f~p~~~~~~r--l~~~~~~~~~~l~~~~~~~~~~Gll~~~~k~iIl~vGRL~~~Kgl~ 577 (800)
..|++ ..|+.|||||+|.+.|.|....... ... ..+.++. ++++++|+++||+.+.||++
T Consensus 203 ~~~~~--~~ki~vIpnGvd~~~f~~~~~~~~~~~~~~--------------~~~~~~~--~~~~~~i~~vGrl~~~Kg~~ 264 (439)
T TIGR02472 203 YDSYQ--PERMQVIPPGVDLSRFYPPQSSEETSEIDN--------------LLAPFLK--DPEKPPILAISRPDRRKNIP 264 (439)
T ss_pred ccCCC--ccceEEECCCcChhhcCCCCccccchhHHH--------------HHHhhcc--ccCCcEEEEEcCCcccCCHH
Confidence 11333 6799999999999999875322110 000 0012233 45678999999999999999
Q ss_pred HHHHHHHHhhccCCCeEEE-EEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEcccccCccChHHHHHHHHcc--
Q 003726 578 GLVECYGKSSKLRELVNLV-VVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISAQMNRVRNGELYRYIADT-- 654 (800)
Q Consensus 578 ~LleA~~~l~~~~~~v~Lv-IVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~~~~~v~~~el~~~ia~a-- 654 (800)
.|++|++++....+..+++ |+|++++. .....+..++.+++..+++++++.++|.|+| .++.+++..+|+.+
T Consensus 265 ~li~A~~~l~~~~~~~~l~li~G~g~~~-~~l~~~~~~~~~~~~~~~~~~~l~~~V~f~g----~~~~~~~~~~~~~a~~ 339 (439)
T TIGR02472 265 SLVEAYGRSPKLQEMANLVLVLGCRDDI-RKMESQQREVLQKVLLLIDRYDLYGKVAYPK----HHRPDDVPELYRLAAR 339 (439)
T ss_pred HHHHHHHhChhhhhhccEEEEeCCcccc-ccccHHHHHHHHHHHHHHHHcCCCceEEecC----CCCHHHHHHHHHHHhh
Confidence 9999998754333334554 45766541 1111122334566778899999999999999 55668888888752
Q ss_pred -CcEEEecCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHH
Q 003726 655 -RGVFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISD 733 (800)
Q Consensus 655 -advfV~PS~~E~fGl~vlEAMA~GlPVIAT~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~ 733 (800)
+|+||+||.+|+||++++||||||+|||+|+.||+.|+|.++.+|++++|+|++++|++|.+++ +|++.+++|++
T Consensus 340 ~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg~~eiv~~~~~G~lv~~~d~~~la~~i~~ll----~~~~~~~~~~~ 415 (439)
T TIGR02472 340 SRGIFVNPALTEPFGLTLLEAAACGLPIVATDDGGPRDIIANCRNGLLVDVLDLEAIASALEDAL----SDSSQWQLWSR 415 (439)
T ss_pred cCCEEecccccCCcccHHHHHHHhCCCEEEeCCCCcHHHhcCCCcEEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHH
Confidence 3999999999999999999999999999999999999999999999999999999999997776 89999999999
Q ss_pred HHHHHHHHhCCHHHHHHHHHHHH
Q 003726 734 GGLKRIYERYTWKIYSERLLTLA 756 (800)
Q Consensus 734 ~a~~~v~~~ysw~~~a~~ll~ly 756 (800)
+|++++.++|||+.++++|+++.
T Consensus 416 ~a~~~~~~~fsw~~~~~~~~~l~ 438 (439)
T TIGR02472 416 NGIEGVRRHYSWDAHVEKYLRIL 438 (439)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHh
Confidence 99999999999999999999875
No 7
>PRK00654 glgA glycogen synthase; Provisional
Probab=100.00 E-value=2.9e-44 Score=412.59 Aligned_cols=427 Identities=20% Similarity=0.245 Sum_probs=292.0
Q ss_pred eEEEEEccCcCCCCccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCcc-cccceee-
Q 003726 268 FNVVIVSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIQNQGLDVIPKILIVTRLIPDAKGTTC-NQRLERI- 345 (800)
Q Consensus 268 ~rI~ivs~hg~~~~~~~lg~p~tGG~~vyild~araL~~eLa~~L~~~GheV~~~i~VvTr~~p~~~g~~~-~~~~e~~- 345 (800)
|||++||.+.+|. ..+||+..++. .|+++|+++||+|. |+|+.++....... .......
T Consensus 1 m~i~~vs~e~~P~-------~k~GGl~~~v~--------~L~~~L~~~G~~V~----v~~p~y~~~~~~~~~~~~~~~~~ 61 (466)
T PRK00654 1 MKILFVASECAPL-------IKTGGLGDVVG--------ALPKALAALGHDVR----VLLPGYPAIREKLRDAQVVGRLD 61 (466)
T ss_pred CeEEEEEcccccC-------cccCcHHHHHH--------HHHHHHHHCCCcEE----EEecCCcchhhhhcCceEEEEee
Confidence 7999999999875 35899999999 66666799999999 99988764321100 0001110
Q ss_pred --------cCCCCeEEEEeccCCCCccccccccccCChhh---HHHH--HHHHHHHHHHHhCCCceEEEECCCCchHHHH
Q 003726 346 --------SGTEHTHILRVPFRTENGILRKWISRFDVWPY---LETF--AEDASNEIAAELQGVPDLIIGNYSDGNLVAT 412 (800)
Q Consensus 346 --------~g~~~v~I~rvp~~~~~~~~~~~isr~~i~~y---l~~f--~~~~~~~ll~~~~~~PDIIh~h~~~~~lva~ 412 (800)
...+|+++++++... +..+..++.| ..+| ...+..++++.++.+|||||+|+|.+++++.
T Consensus 62 ~~~~~~~~~~~~gv~v~~v~~~~-------~~~~~~~y~~~d~~~r~~~f~~~~~~~~~~~~~~pDiiH~h~w~~~~~~~ 134 (466)
T PRK00654 62 LFTVLFGHLEGDGVPVYLIDAPH-------LFDRPSGYGYPDNGERFAFFSWAAAEFAEGLDPRPDIVHAHDWHTGLIPA 134 (466)
T ss_pred eEEEEEEeEEcCCceEEEEeCHH-------HcCCCCCCCCcChHHHHHHHHHHHHHHHHhcCCCCceEEECCcHHHHHHH
Confidence 112467888776422 2333344443 2222 3334445555556799999999999999999
Q ss_pred HHHhcC-----CCeEEEEecCCcccc-CCCChhhH-----Hhh-hhhhccchhhhHHHHHhccCCEEEecCHHHHhhccc
Q 003726 413 LLSYKL-----GVTQCNIAHALEKTK-YPDSDLYW-----RKF-EEKYHFSSQFTADLTAMNNADFIITSTYQEIAGSKN 480 (800)
Q Consensus 413 lla~~~-----gip~v~t~H~l~~~~-~~~s~~~~-----~~~-~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ei~~~~~ 480 (800)
++++.. ++|+|+|+|++.... ++...... ..+ .....+...+...+.+++.||.|||+|+...+...+
T Consensus 135 ~l~~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS~~~~~ei~~ 214 (466)
T PRK00654 135 LLKEKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGLEFYGQISFLKAGLYYADRVTTVSPTYAREITT 214 (466)
T ss_pred HHHHhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhhhcCCcccHHHHHHHhcCcCeeeCHHHHHHhcc
Confidence 888663 799999999985432 11000000 000 001111112233456899999999999876553221
Q ss_pred CccccccccccccccceeeeccCCCCCCceEEecCCCCCCCCCCCChHHHHHHHhh-ccccccccCCccccccccccCCC
Q 003726 481 NVGQYENHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSDKEKRLIALH-GQIEDLLYDPKQNDEHVGILNDR 559 (800)
Q Consensus 481 ~~gqy~~~~~f~~p~l~~vv~Gi~v~~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~-~~~~~~l~~~~~~~~~~Gll~~~ 559 (800)
. + ..+++.+++ .....|+.+|+||+|.+.|.|........ .+. ..+++...++...++++|+. ++
T Consensus 215 ~---~---~~~gl~~~~------~~~~~ki~vI~NGid~~~~~p~~~~~~~~-~~~~~~~~~k~~~k~~l~~~~gl~-~~ 280 (466)
T PRK00654 215 P---E---FGYGLEGLL------RARSGKLSGILNGIDYDIWNPETDPLLAA-NYSADDLEGKAENKRALQERFGLP-DD 280 (466)
T ss_pred c---c---CCcChHHHH------HhcccCceEecCCCCccccCCccCccccc-ccChhhhhchHHHHHHHHHHhCCC-CC
Confidence 1 0 011111110 11256899999999999998864321000 000 00001111122345678873 34
Q ss_pred CCcEEEEEecCCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEE-cccc
Q 003726 560 SKPLIFSMARLDGVKNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRW-ISAQ 638 (800)
Q Consensus 560 ~k~iIl~vGRL~~~Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~f-lG~~ 638 (800)
+.++|+++||+.+.||++.|++|++++.+. +++|+|+|+|.. .+.+.+++++++++ +++.+ .|+
T Consensus 281 ~~~~i~~vGRl~~~KG~~~li~a~~~l~~~--~~~lvivG~g~~----------~~~~~l~~l~~~~~--~~v~~~~g~- 345 (466)
T PRK00654 281 DAPLFAMVSRLTEQKGLDLVLEALPELLEQ--GGQLVLLGTGDP----------ELEEAFRALAARYP--GKVGVQIGY- 345 (466)
T ss_pred CCcEEEEeeccccccChHHHHHHHHHHHhc--CCEEEEEecCcH----------HHHHHHHHHHHHCC--CcEEEEEeC-
Confidence 789999999999999999999999998753 799999999854 23567888888886 45665 442
Q ss_pred cCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcCccccccccccC------ceEEEECCCCHHHHHH
Q 003726 639 MNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHG------VSGFHIDPYHPDQVAE 712 (800)
Q Consensus 639 ~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~~GG~~EiI~dg------~~G~lv~p~d~e~lA~ 712 (800)
+.+.+..+++. +|+||+||.+|+||++++|||+||+|+|+|+.||+.|+|.++ .+|++++|+|++++++
T Consensus 346 ----~~~~~~~~~~~-aDv~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv~~~d~~~la~ 420 (466)
T PRK00654 346 ----DEALAHRIYAG-ADMFLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGEATGFVFDDFNAEDLLR 420 (466)
T ss_pred ----CHHHHHHHHhh-CCEEEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCCCceEEeCCCCHHHHHH
Confidence 23344566775 999999999999999999999999999999999999999988 8999999999999999
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003726 713 LMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLTLAGV 758 (800)
Q Consensus 713 aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 758 (800)
+|.++++.+ .+++.|.+|+.++++ ++|||+.++++|+++|+.
T Consensus 421 ~i~~~l~~~-~~~~~~~~~~~~~~~---~~fsw~~~a~~~~~lY~~ 462 (466)
T PRK00654 421 ALRRALELY-RQPPLWRALQRQAMA---QDFSWDKSAEEYLELYRR 462 (466)
T ss_pred HHHHHHHHh-cCHHHHHHHHHHHhc---cCCChHHHHHHHHHHHHH
Confidence 998876433 477779999888864 689999999999999973
No 8
>PLN02939 transferase, transferring glycosyl groups
Probab=100.00 E-value=1.2e-42 Score=411.15 Aligned_cols=459 Identities=16% Similarity=0.184 Sum_probs=314.7
Q ss_pred HHHhhcCCCcchHhhhhc--cCC--ceeEEEEEccCcCCCCccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHCCCccc
Q 003726 245 LLDILQAPDPATLETFLG--RIP--MVFNVVIVSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIQNQGLDVI 320 (800)
Q Consensus 245 l~~~~~~p~~~~l~~f~~--~~p--~~~rI~ivs~hg~~~~~~~lg~p~tGG~~vyild~araL~~eLa~~L~~~GheV~ 320 (800)
-.++.+.+|.+.+..|+. +.| +.|||++||....|. ..|||...++. .|.++|+++||+|.
T Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~mkILfVasE~aP~-------aKtGGLaDVv~--------sLPkAL~~~GhdV~ 519 (977)
T PLN02939 455 YLSCKGKNEREAVENFLKLTLSGTSSGLHIVHIAAEMAPV-------AKVGGLADVVS--------GLGKALQKKGHLVE 519 (977)
T ss_pred HHHHhcCchHHHHHHHHHhccCCCCCCCEEEEEEcccccc-------cccccHHHHHH--------HHHHHHHHcCCeEE
Confidence 345677888887777764 222 459999999988765 46999999999 55555689999999
Q ss_pred cceeEEeCCCCCCCCCcc-cc-----cce-eecC-----------CCCeEEEEeccCCCCccccccccccCChhh---HH
Q 003726 321 PKILIVTRLIPDAKGTTC-NQ-----RLE-RISG-----------TEHTHILRVPFRTENGILRKWISRFDVWPY---LE 379 (800)
Q Consensus 321 ~~i~VvTr~~p~~~g~~~-~~-----~~e-~~~g-----------~~~v~I~rvp~~~~~~~~~~~isr~~i~~y---l~ 379 (800)
|+++.++....... +. ... ...+ .+|+.++.+..... ..++.|..++.+ .+
T Consensus 520 ----VIlP~Y~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~GV~vyfId~~~~----~~fF~R~~iYg~~Dn~~ 591 (977)
T PLN02939 520 ----IVLPKYDCMQYDQIRNLKVLDVVVESYFDGNLFKNKIWTGTVEGLPVYFIEPQHP----SKFFWRAQYYGEHDDFK 591 (977)
T ss_pred ----EEeCCCcccChhhhhcccccceEEEEeecCceeEEEEEEEEECCeeEEEEecCCc----hhccCCCCCCCCccHHH
Confidence 99998864321000 00 000 0000 01333333321000 013444455532 23
Q ss_pred H--HHHHHHHHHHHHhCCCceEEEECCCCchHHHHHHHh------cCCCeEEEEecCCcccc-CCCChh-----hHHhhh
Q 003726 380 T--FAEDASNEIAAELQGVPDLIIGNYSDGNLVATLLSY------KLGVTQCNIAHALEKTK-YPDSDL-----YWRKFE 445 (800)
Q Consensus 380 ~--f~~~~~~~ll~~~~~~PDIIh~h~~~~~lva~lla~------~~gip~v~t~H~l~~~~-~~~s~~-----~~~~~~ 445 (800)
+ |+..+..+++...+++|||||||+|.+++++.++.+ ..+++.|+|+|++.... ++.... .+..+.
T Consensus 592 RF~~FsrAaLe~~~~~~~~PDIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l~ 671 (977)
T PLN02939 592 RFSYFSRAALELLYQSGKKPDIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGLDVHQLD 671 (977)
T ss_pred HHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHHcc
Confidence 3 334555566666578999999999999998655443 23589999999986443 221111 111110
Q ss_pred --hhh--ccchhhhHHHHHhccCCEEEecCHHHHhhcccCccccccccccccccceeeeccCCCCCCceEEecCCCCCCC
Q 003726 446 --EKY--HFSSQFTADLTAMNNADFIITSTYQEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCI 521 (800)
Q Consensus 446 --~~y--~f~~~~~~e~~a~~~AD~IIt~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~~k~~VIpnGvD~~~ 521 (800)
... ++..++..-+.++..||.|+|+|+..+...... ..+++.++ +.....|+.+|+||+|.+.
T Consensus 672 ~~d~le~~~~~~iN~LK~GIv~AD~VtTVSptYA~EI~te-------~G~GL~~~------L~~~~~Kl~gIlNGID~e~ 738 (977)
T PLN02939 672 RPDRMQDNAHGRINVVKGAIVYSNIVTTVSPTYAQEVRSE-------GGRGLQDT------LKFHSKKFVGILNGIDTDT 738 (977)
T ss_pred ChhhhhhccCCchHHHHHHHHhCCeeEeeeHHHHHHHHHH-------hccchHHH------hccccCCceEEecceehhh
Confidence 000 011122222346667999999999766533221 11122221 1223679999999999999
Q ss_pred CCCCChHHHHHHHhhccccccccCCccccccccccCC-CCCcEEEEEecCCCCCCHHHHHHHHHHhhccCCCeEEEEEec
Q 003726 522 YFPYSDKEKRLIALHGQIEDLLYDPKQNDEHVGILND-RSKPLIFSMARLDGVKNLTGLVECYGKSSKLRELVNLVVVGG 600 (800)
Q Consensus 522 f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~Gll~~-~~k~iIl~vGRL~~~Kgl~~LleA~~~l~~~~~~v~LvIVG~ 600 (800)
|.|.++.--...--...++....++...++++|+..+ ++.|+|+++||+.+.||++.+++|+.++.+ ++++|+|+|+
T Consensus 739 wnPatD~~L~~~Ys~~dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~--~dvqLVIvGd 816 (977)
T PLN02939 739 WNPSTDRFLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE--LGGQFVLLGS 816 (977)
T ss_pred cCCccccccccccChhhhhhhhhhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh--cCCEEEEEeC
Confidence 9987542100000001122233344566788998532 467999999999999999999999998764 4799999999
Q ss_pred cCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCc
Q 003726 601 YMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLP 680 (800)
Q Consensus 601 g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlP 680 (800)
|+. ..+.+.+..+++++++.++|.|+| ..+......+|+. +|+||+||++|+||++++|||+||+|
T Consensus 817 Gp~---------~~~e~eL~~La~~l~l~drV~FlG----~~de~lah~IYAa-ADIFLmPSr~EPfGLvqLEAMAyGtP 882 (977)
T PLN02939 817 SPV---------PHIQREFEGIADQFQSNNNIRLIL----KYDEALSHSIYAA-SDMFIIPSMFEPCGLTQMIAMRYGSV 882 (977)
T ss_pred CCc---------HHHHHHHHHHHHHcCCCCeEEEEe----ccCHHHHHHHHHh-CCEEEECCCccCCcHHHHHHHHCCCC
Confidence 975 123567889999999999999998 3444555677885 99999999999999999999999999
Q ss_pred EEEcCcccccccccc---------CceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHH
Q 003726 681 TFATCHGGPAEIIEH---------GVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSER 751 (800)
Q Consensus 681 VIAT~~GG~~EiI~d---------g~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ 751 (800)
+|+++.||+.|+|.+ +.+||+++++|+++++++|.+++..+..||+.|++|+++++ .++|||+.++++
T Consensus 883 PVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~~~~L~~~am---~~dFSWe~~A~q 959 (977)
T PLN02939 883 PIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVWKQLVQKDM---NIDFSWDSSASQ 959 (977)
T ss_pred EEEecCCCCcceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHH---HhcCCHHHHHHH
Confidence 999999999999875 57999999999999999999988777789999999998765 368999999999
Q ss_pred HHHHHHH
Q 003726 752 LLTLAGV 758 (800)
Q Consensus 752 ll~ly~~ 758 (800)
|+++|+.
T Consensus 960 YeeLY~~ 966 (977)
T PLN02939 960 YEELYQR 966 (977)
T ss_pred HHHHHHH
Confidence 9999864
No 9
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=100.00 E-value=2.5e-43 Score=395.86 Aligned_cols=399 Identities=22% Similarity=0.320 Sum_probs=298.1
Q ss_pred EEEEccCcCCCCccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCcccccceeecCCC
Q 003726 270 VVIVSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIQNQGLDVIPKILIVTRLIPDAKGTTCNQRLERISGTE 349 (800)
Q Consensus 270 I~ivs~hg~~~~~~~lg~p~tGG~~vyild~araL~~eLa~~L~~~GheV~~~i~VvTr~~p~~~g~~~~~~~e~~~g~~ 349 (800)
|++++.|..|.. +++.-+.||.++|+. +|+++|+++||+|+ |+|.......+. . ....+
T Consensus 1 ~~~~~~~~~~~~--~~~~~~~GG~e~~v~--------~la~~L~~~G~~V~----v~~~~~~~~~~~-----~--~~~~~ 59 (405)
T TIGR03449 1 VAMISMHTSPLQ--QPGTGDAGGMNVYIL--------ETATELARRGIEVD----IFTRATRPSQPP-----V--VEVAP 59 (405)
T ss_pred CeEEeccCCccc--cCCCcCCCCceehHH--------HHHHHHhhCCCEEE----EEecccCCCCCC-----c--cccCC
Confidence 578899998753 345556799999999 77777899999999 999764322111 1 11124
Q ss_pred CeEEEEeccCCCCccccccccccCChhhHHHHHHHHHHHHHHHhCCCceEEEECCCCchHHHHHHHhcCCCeEEEEecCC
Q 003726 350 HTHILRVPFRTENGILRKWISRFDVWPYLETFAEDASNEIAAELQGVPDLIIGNYSDGNLVATLLSYKLGVTQCNIAHAL 429 (800)
Q Consensus 350 ~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~ll~~~~~~PDIIh~h~~~~~lva~lla~~~gip~v~t~H~l 429 (800)
++++.+++..+..+ .....+..++..|.....+.+++....+||+||+|++.+++++.++++..++|+|+|.|++
T Consensus 60 ~~~v~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Diih~h~~~~~~~~~~~~~~~~~p~v~t~h~~ 134 (405)
T TIGR03449 60 GVRVRNVVAGPYEG-----LDKEDLPTQLCAFTGGVLRAEARHEPGYYDLIHSHYWLSGQVGWLLRDRWGVPLVHTAHTL 134 (405)
T ss_pred CcEEEEecCCCccc-----CCHHHHHHHHHHHHHHHHHHHhhccCCCCCeEEechHHHHHHHHHHHHhcCCCEEEeccch
Confidence 78898887654322 1111122223334444444444444568999999998888888888998999999999986
Q ss_pred ccccCCCChhhHHhhhhhhccchhhhHHHHHhccCCEEEecCHHHHhhcccCccccccccccccccceeeeccCCCCCCc
Q 003726 430 EKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNNADFIITSTYQEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFDPK 509 (800)
Q Consensus 430 ~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~~k 509 (800)
...+ ..++..... .........+...++.+|.||++|+...+..... .|.+ ..+
T Consensus 135 ~~~~----~~~~~~~~~-~~~~~~~~~e~~~~~~~d~vi~~s~~~~~~~~~~-------------------~~~~--~~k 188 (405)
T TIGR03449 135 AAVK----NAALADGDT-PEPEARRIGEQQLVDNADRLIANTDEEARDLVRH-------------------YDAD--PDR 188 (405)
T ss_pred HHHH----HHhccCCCC-CchHHHHHHHHHHHHhcCeEEECCHHHHHHHHHH-------------------cCCC--hhh
Confidence 4211 000000000 0000112235668899999999998765521111 1222 568
Q ss_pred eEEecCCCCCCCCCCCChHHHHHHHhhccccccccCCccccccccccCCCCCcEEEEEecCCCCCCHHHHHHHHHHhhcc
Q 003726 510 FNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLYDPKQNDEHVGILNDRSKPLIFSMARLDGVKNLTGLVECYGKSSKL 589 (800)
Q Consensus 510 ~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~l~~~ 589 (800)
+.+||||+|.+.|.|...... ++++|+ ++++++|+++||+.+.||++.+++|+.++.+.
T Consensus 189 i~vi~ngvd~~~~~~~~~~~~-------------------~~~~~~--~~~~~~i~~~G~l~~~K~~~~li~a~~~l~~~ 247 (405)
T TIGR03449 189 IDVVAPGADLERFRPGDRATE-------------------RARLGL--PLDTKVVAFVGRIQPLKAPDVLLRAVAELLDR 247 (405)
T ss_pred EEEECCCcCHHHcCCCcHHHH-------------------HHhcCC--CCCCcEEEEecCCCcccCHHHHHHHHHHHHhh
Confidence 999999999998876533221 134565 56788999999999999999999999998776
Q ss_pred CCC--eEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEcccccCccChHHHHHHHHccCcEEEecCCCCCC
Q 003726 590 REL--VNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAF 667 (800)
Q Consensus 590 ~~~--v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~f 667 (800)
.++ ++|+|+|++... ...+.+.++++++++++.++|.|+| .++.+++..+++. +|++|+||..|+|
T Consensus 248 ~~~~~~~l~ivG~~~~~-------g~~~~~~l~~~~~~~~l~~~v~~~g----~~~~~~~~~~l~~-ad~~v~ps~~E~~ 315 (405)
T TIGR03449 248 DPDRNLRVIVVGGPSGS-------GLATPDALIELAAELGIADRVRFLP----PRPPEELVHVYRA-ADVVAVPSYNESF 315 (405)
T ss_pred CCCcceEEEEEeCCCCC-------cchHHHHHHHHHHHcCCCceEEECC----CCCHHHHHHHHHh-CCEEEECCCCCCc
Confidence 666 999999975320 0112467888999999999999999 5677899999996 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHH
Q 003726 668 GLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKI 747 (800)
Q Consensus 668 Gl~vlEAMA~GlPVIAT~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~ 747 (800)
|++++|||+||+|||+|+.||..|+|+++.+|++++++|+++++++|.+++ +|++.+++|++++++.+ ++|||+.
T Consensus 316 g~~~lEAma~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~~l----~~~~~~~~~~~~~~~~~-~~fsw~~ 390 (405)
T TIGR03449 316 GLVAMEAQACGTPVVAARVGGLPVAVADGETGLLVDGHDPADWADALARLL----DDPRTRIRMGAAAVEHA-AGFSWAA 390 (405)
T ss_pred ChHHHHHHHcCCCEEEecCCCcHhhhccCCceEECCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHH-HhCCHHH
Confidence 999999999999999999999999999999999999999999999998877 79999999999999987 7899999
Q ss_pred HHHHHHHHHHH
Q 003726 748 YSERLLTLAGV 758 (800)
Q Consensus 748 ~a~~ll~ly~~ 758 (800)
++++++++|..
T Consensus 391 ~~~~~~~~y~~ 401 (405)
T TIGR03449 391 TADGLLSSYRD 401 (405)
T ss_pred HHHHHHHHHHH
Confidence 99999999863
No 10
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=100.00 E-value=7.9e-43 Score=401.35 Aligned_cols=430 Identities=19% Similarity=0.234 Sum_probs=296.3
Q ss_pred eEEEEEccCcCCCCccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCcccc-----cc
Q 003726 268 FNVVIVSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIQNQGLDVIPKILIVTRLIPDAKGTTCNQ-----RL 342 (800)
Q Consensus 268 ~rI~ivs~hg~~~~~~~lg~p~tGG~~vyild~araL~~eLa~~L~~~GheV~~~i~VvTr~~p~~~g~~~~~-----~~ 342 (800)
|||++||+..+|. -.+||+..++. .|+++|+++||+|. |+|+.++......... ..
T Consensus 1 m~i~~vs~E~~P~-------~k~GGl~~~v~--------~L~~aL~~~G~~v~----v~~p~y~~~~~~~~~~~~~~~~~ 61 (473)
T TIGR02095 1 MRVLFVAAEMAPF-------AKTGGLADVVG--------ALPKALAALGHDVR----VLLPAYGCIEDEVDDQVKVVELV 61 (473)
T ss_pred CeEEEEEeccccc-------cCcCcHHHHHH--------HHHHHHHHcCCeEE----EEecCCcChhhhhccCeEEEEEE
Confidence 7999999998864 35899999999 55555689999999 9998876532110000 00
Q ss_pred e--------e----ecCCCCeEEEEeccCCCCcccccccccc-CChh-----hHHHH--HHHHHHHHHHHhCCCceEEEE
Q 003726 343 E--------R----ISGTEHTHILRVPFRTENGILRKWISRF-DVWP-----YLETF--AEDASNEIAAELQGVPDLIIG 402 (800)
Q Consensus 343 e--------~----~~g~~~v~I~rvp~~~~~~~~~~~isr~-~i~~-----yl~~f--~~~~~~~ll~~~~~~PDIIh~ 402 (800)
. . ....+++.++++.... ++.|. .++. ...+| ...+..++++..+.+|||||+
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~v~~~~i~~~~-------~~~r~~~~y~~~~~d~~~r~~~f~~a~~~~~~~~~~~~DiiH~ 134 (473)
T TIGR02095 62 DLSVGPRTLYVKVFEGVVEGVPVYFIDNPS-------LFDRPGGIYGDDYPDNAERFAFFSRAAAELLSGLGWQPDVVHA 134 (473)
T ss_pred EEeecCceeEEEEEEEEECCceEEEEECHH-------HcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCEEEE
Confidence 0 0 0111356666664321 11111 1221 12232 233444455545679999999
Q ss_pred CCCCchHHHHHHHhcCC---CeEEEEecCCcccc-CCCChhhH-----Hhhh-hhhccchhhhHHHHHhccCCEEEecCH
Q 003726 403 NYSDGNLVATLLSYKLG---VTQCNIAHALEKTK-YPDSDLYW-----RKFE-EKYHFSSQFTADLTAMNNADFIITSTY 472 (800)
Q Consensus 403 h~~~~~lva~lla~~~g---ip~v~t~H~l~~~~-~~~s~~~~-----~~~~-~~y~f~~~~~~e~~a~~~AD~IIt~S~ 472 (800)
|+|.+++++.+++...+ +|+|+|+|++.... ++.....+ ..+. ..+.+...+...+.+++.||.|+|+|+
T Consensus 135 hdw~~~~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v~tVS~ 214 (473)
T TIGR02095 135 HDWHTALVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGLEFYGRVNFLKGGIVYADRVTTVSP 214 (473)
T ss_pred CCcHHHHHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchhhhcCCchHHHHHHHHhCCcCeecCH
Confidence 99999999999988776 99999999976432 12111111 0000 001111123345678999999999998
Q ss_pred HHHhhcccCccccccccccccccceeeeccCCCCCCceEEecCCCCCCCCCCCChHHHHHHHhh-ccccccccCCccccc
Q 003726 473 QEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSDKEKRLIALH-GQIEDLLYDPKQNDE 551 (800)
Q Consensus 473 ~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~-~~~~~~l~~~~~~~~ 551 (800)
..++...... ..+++.++. .....++.+|+||+|.+.|.|..+.... ..+. ...+....++...++
T Consensus 215 ~~~~ei~~~~------~~~~l~~~l------~~~~~ki~~I~NGid~~~~~p~~~~~~~-~~~~~~~~~~k~~~k~~l~~ 281 (473)
T TIGR02095 215 TYAREILTPE------FGYGLDGVL------KARSGKLRGILNGIDTEVWNPATDPYLK-ANYSADDLAGKAENKEALQE 281 (473)
T ss_pred hHHHHhcCCc------CCccchhHH------HhcCCCeEEEeCCCCccccCCCCCcccc-cCcCccchhhhhhhHHHHHH
Confidence 7655322210 011111111 1125689999999999999875432100 0000 000001111233457
Q ss_pred cccccCCCCCcEEEEEecCCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCc
Q 003726 552 HVGILNDRSKPLIFSMARLDGVKNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQ 631 (800)
Q Consensus 552 ~~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~ 631 (800)
++|+..++++++|+++||+.+.||++.+++|+.++.+. +++|+|+|+|.. ...+.+++++++++ ++
T Consensus 282 ~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~--~~~lvi~G~g~~----------~~~~~l~~~~~~~~--~~ 347 (473)
T TIGR02095 282 ELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLEL--GGQLVVLGTGDP----------ELEEALRELAERYP--GN 347 (473)
T ss_pred HcCCCccCCCCEEEEEecCccccChHHHHHHHHHHHHc--CcEEEEECCCCH----------HHHHHHHHHHHHCC--Cc
Confidence 78885455889999999999999999999999998753 599999999853 23467778887765 67
Q ss_pred EEEcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcCccccccccccC------ceEEEECCC
Q 003726 632 FRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHG------VSGFHIDPY 705 (800)
Q Consensus 632 V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~~GG~~EiI~dg------~~G~lv~p~ 705 (800)
+.+.+ ..+.+++..+++. +|++++||.+|+||++++|||+||+|||+|+.||..|+|.++ .+|++++|.
T Consensus 348 v~~~~----~~~~~~~~~~~~~-aDv~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~~~~ 422 (473)
T TIGR02095 348 VRVII----GYDEALAHLIYAG-ADFILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAESGTGFLFEEY 422 (473)
T ss_pred EEEEE----cCCHHHHHHHHHh-CCEEEeCCCcCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCCCCCCceEEeCCC
Confidence 88887 3455667778885 999999999999999999999999999999999999999998 899999999
Q ss_pred CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003726 706 HPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLTLAGV 758 (800)
Q Consensus 706 d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 758 (800)
|+++++++|.+++..+..|++.|++|++++++ ++|||+.++++|+++|+.
T Consensus 423 d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~~---~~fsw~~~a~~~~~~Y~~ 472 (473)
T TIGR02095 423 DPGALLAALSRALRLYRQDPSLWEALQKNAMS---QDFSWDKSAKQYVELYRS 472 (473)
T ss_pred CHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhc---cCCCcHHHHHHHHHHHHh
Confidence 99999999999886555599999999998863 689999999999999963
No 11
>PLN02316 synthase/transferase
Probab=100.00 E-value=2e-41 Score=407.64 Aligned_cols=406 Identities=17% Similarity=0.107 Sum_probs=284.2
Q ss_pred eeEEEEEccCcCCCCccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCc-ccccc-ee
Q 003726 267 VFNVVIVSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIQNQGLDVIPKILIVTRLIPDAKGTT-CNQRL-ER 344 (800)
Q Consensus 267 ~~rI~ivs~hg~~~~~~~lg~p~tGG~~vyild~araL~~eLa~~L~~~GheV~~~i~VvTr~~p~~~g~~-~~~~~-e~ 344 (800)
+|||++||.+..|. ..+||+..++. .|+++|+++||+|. |+|+.++...... ..... ..
T Consensus 587 pM~Il~VSsE~~P~-------aKvGGLgDVV~--------sLp~ALa~~Gh~V~----VitP~Y~~i~~~~~~~~~~~~~ 647 (1036)
T PLN02316 587 PMHIVHIAVEMAPI-------AKVGGLGDVVT--------SLSRAVQDLNHNVD----IILPKYDCLNLSHVKDLHYQRS 647 (1036)
T ss_pred CcEEEEEEcccCCC-------CCcCcHHHHHH--------HHHHHHHHcCCEEE----EEecCCcccchhhcccceEEEE
Confidence 49999999999874 35899999999 55556699999999 9999876421000 00000 00
Q ss_pred ec-----------CCCCeEEEEeccCCCCccccccccccCChhh---HHHH--HHHHHHHHHHHhCCCceEEEECCCCch
Q 003726 345 IS-----------GTEHTHILRVPFRTENGILRKWISRFDVWPY---LETF--AEDASNEIAAELQGVPDLIIGNYSDGN 408 (800)
Q Consensus 345 ~~-----------g~~~v~I~rvp~~~~~~~~~~~isr~~i~~y---l~~f--~~~~~~~ll~~~~~~PDIIh~h~~~~~ 408 (800)
+. ..+|+.++.+.... + ++.+..++.| ..+| ...+..+++.....+|||||||+|.++
T Consensus 648 ~~~~~~~~~v~~~~~~GV~vyfl~~~~--~----~F~r~~~Yg~~Dd~~RF~~F~~Aale~l~~~~~~PDIIHaHDW~ta 721 (1036)
T PLN02316 648 YSWGGTEIKVWFGKVEGLSVYFLEPQN--G----MFWAGCVYGCRNDGERFGFFCHAALEFLLQSGFHPDIIHCHDWSSA 721 (1036)
T ss_pred eccCCEEEEEEEEEECCcEEEEEeccc--c----ccCCCCCCCchhHHHHHHHHHHHHHHHHHhcCCCCCEEEECCChHH
Confidence 00 01245555554211 1 2223333322 2333 234444555555679999999999999
Q ss_pred HHHHHHHhc------CCCeEEEEecCCccccCCCChhhHHhhhhhhccchhhhHHHHHhccCCEEEecCHHHHhhcccCc
Q 003726 409 LVATLLSYK------LGVTQCNIAHALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNNADFIITSTYQEIAGSKNNV 482 (800)
Q Consensus 409 lva~lla~~------~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ei~~~~~~~ 482 (800)
+++.+++.. .++|+|+|+|++.... ++ -..++..||.|+|+|+...+....
T Consensus 722 lva~llk~~~~~~~~~~~p~V~TiHnl~~~~---------------n~------lk~~l~~AD~ViTVS~tya~EI~~-- 778 (1036)
T PLN02316 722 PVAWLFKDHYAHYGLSKARVVFTIHNLEFGA---------------NH------IGKAMAYADKATTVSPTYSREVSG-- 778 (1036)
T ss_pred HHHHHHHHhhhhhccCCCCEEEEeCCcccch---------------hH------HHHHHHHCCEEEeCCHHHHHHHHh--
Confidence 999988764 3589999999864211 00 123678999999999976543211
Q ss_pred cccccccccccccceeeeccCCCCCCceEEecCCCCCCCCCCCChHHHHHH-HhhccccccccCCccccccccccCCCCC
Q 003726 483 GQYENHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSDKEKRLI-ALHGQIEDLLYDPKQNDEHVGILNDRSK 561 (800)
Q Consensus 483 gqy~~~~~f~~p~l~~vv~Gi~v~~~k~~VIpnGvD~~~f~p~~~~~~rl~-~~~~~~~~~l~~~~~~~~~~Gll~~~~k 561 (800)
. .++.....|+.+|+||+|.+.|.|.++...... .....++........+++.+|+. .++.
T Consensus 779 -~----------------~~l~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~~k~~Lr~~lGL~-~~d~ 840 (1036)
T PLN02316 779 -N----------------SAIAPHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAKEALQQRLGLK-QADL 840 (1036)
T ss_pred -c----------------cCcccccCCEEEEECCccccccCCcccccccccCCchhhhhhhhhhHHHHHHHhCCC-cccC
Confidence 0 112212468999999999999988643210000 00000001111223345778884 2478
Q ss_pred cEEEEEecCCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCC--CCcEEEccccc
Q 003726 562 PLIFSMARLDGVKNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNL--HGQFRWISAQM 639 (800)
Q Consensus 562 ~iIl~vGRL~~~Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL--~~~V~flG~~~ 639 (800)
|+|+++|||.+.||++.|++|+.++.+ .+++|+|+|+|++ ..+.+.+.++++++++ +++|.|.|..
T Consensus 841 plVg~VGRL~~qKGvdlLi~Al~~ll~--~~~qlVIvG~Gpd---------~~~e~~l~~La~~Lg~~~~~rV~f~g~~- 908 (1036)
T PLN02316 841 PLVGIITRLTHQKGIHLIKHAIWRTLE--RNGQVVLLGSAPD---------PRIQNDFVNLANQLHSSHHDRARLCLTY- 908 (1036)
T ss_pred eEEEEEeccccccCHHHHHHHHHHHhh--cCcEEEEEeCCCC---------HHHHHHHHHHHHHhCccCCCeEEEEecC-
Confidence 999999999999999999999999765 4799999999976 1235678889998876 5789998732
Q ss_pred CccChHHHH-HHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcCccccccccccC-------------ceEEEECCC
Q 003726 640 NRVRNGELY-RYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHG-------------VSGFHIDPY 705 (800)
Q Consensus 640 ~~v~~~el~-~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~~GG~~EiI~dg-------------~~G~lv~p~ 705 (800)
.+.+. .+|+ ++|+||+||++|+||++++|||+||+|+|+++.||++|+|.|+ .+||++++.
T Consensus 909 ----de~lah~iya-aADiflmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~~ 983 (1036)
T PLN02316 909 ----DEPLSHLIYA-GADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDGA 983 (1036)
T ss_pred ----CHHHHHHHHH-hCcEEEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCceEEeCCC
Confidence 23443 5666 5999999999999999999999999999999999999999884 699999999
Q ss_pred CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003726 706 HPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLTLAGV 758 (800)
Q Consensus 706 d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 758 (800)
|+++++.+|.+++..+ ++....+++.+++.+.++|||+.++++|+++|+.
T Consensus 984 d~~aLa~AL~raL~~~---~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~LY~~ 1033 (1036)
T PLN02316 984 DAAGVDYALNRAISAW---YDGRDWFNSLCKRVMEQDWSWNRPALDYMELYHS 1033 (1036)
T ss_pred CHHHHHHHHHHHHhhh---hhhHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHH
Confidence 9999999999888432 3334556777777777899999999999999964
No 12
>PRK14098 glycogen synthase; Provisional
Probab=100.00 E-value=9.6e-42 Score=393.04 Aligned_cols=439 Identities=18% Similarity=0.201 Sum_probs=299.0
Q ss_pred CceeEEEEEccCcCCCCccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCc--ccc--
Q 003726 265 PMVFNVVIVSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIQNQGLDVIPKILIVTRLIPDAKGTT--CNQ-- 340 (800)
Q Consensus 265 p~~~rI~ivs~hg~~~~~~~lg~p~tGG~~vyild~araL~~eLa~~L~~~GheV~~~i~VvTr~~p~~~g~~--~~~-- 340 (800)
|| |||++||..-.|- ..|||..-++-.+ .++|+++||+|. |+++.+..-.... ...
T Consensus 4 ~~-~~il~v~~E~~p~-------~k~Ggl~dv~~~L--------p~al~~~g~~v~----v~~P~y~~~~~~~~~~~~~~ 63 (489)
T PRK14098 4 RN-FKVLYVSGEVSPF-------VRVSALADFMASF--------PQALEEEGFEAR----IMMPKYGTINDRKFRLHDVL 63 (489)
T ss_pred CC-cEEEEEeecchhh-------cccchHHHHHHHH--------HHHHHHCCCeEE----EEcCCCCchhhhhhccccce
Confidence 55 9999999988864 5799999999944 445689999999 9999876542210 000
Q ss_pred cceee--cCCCCeEEEEec--cCCCCc----c--ccccccccCChh----------hHHHHH--HHHHHHHHHHhCCCce
Q 003726 341 RLERI--SGTEHTHILRVP--FRTENG----I--LRKWISRFDVWP----------YLETFA--EDASNEIAAELQGVPD 398 (800)
Q Consensus 341 ~~e~~--~g~~~v~I~rvp--~~~~~~----~--~~~~isr~~i~~----------yl~~f~--~~~~~~ll~~~~~~PD 398 (800)
....+ .-.....+.++- ..+..+ + -..++.|..++. ..++|+ ..+..+++...+.+||
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~f~r~~~y~~~~~g~~~~d~~~rf~~f~~a~l~~~~~~~~~pD 143 (489)
T PRK14098 64 RLSDIEVPLKEKTDLLHVKVTALPSSKIQTYFLYNEKYFKRNGLFTDMSLGGDLKGSAEKVIFFNVGVLETLQRLGWKPD 143 (489)
T ss_pred EEEEEEEeecCeeEEEEEEEecccCCCceEEEEeCHHHcCCCCcCCCCccCCCCCcHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 01010 000012222211 000000 0 012334444441 133433 3344455555567999
Q ss_pred EEEECCCCchHHHHHHHhcC-------CCeEEEEecCCccccCCCChhh-----HHhhhhhhccchhhhHHHHHhccCCE
Q 003726 399 LIIGNYSDGNLVATLLSYKL-------GVTQCNIAHALEKTKYPDSDLY-----WRKFEEKYHFSSQFTADLTAMNNADF 466 (800)
Q Consensus 399 IIh~h~~~~~lva~lla~~~-------gip~v~t~H~l~~~~~~~s~~~-----~~~~~~~y~f~~~~~~e~~a~~~AD~ 466 (800)
|||+|+|.+++++.+++++. ++|+|+|+|++........... +........+...+...+.+++.||.
T Consensus 144 iiH~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~n~lk~~i~~ad~ 223 (489)
T PRK14098 144 IIHCHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLLPEEVCSGLHREGDEVNMLYTGVEHADL 223 (489)
T ss_pred EEEecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhCCHHhhhhhhhcCCcccHHHHHHHhcCc
Confidence 99999999999999887654 7999999999754432111100 00000000111122345668999999
Q ss_pred EEecCHHHHhhcccCccccccccccccccceeeeccCCCCCCceEEecCCCCCCCCCCCChHHHHHHHhh-ccccccccC
Q 003726 467 IITSTYQEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSDKEKRLIALH-GQIEDLLYD 545 (800)
Q Consensus 467 IIt~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~-~~~~~~l~~ 545 (800)
|+|+|+..++...+. . ...++++++.+ ....|+.+|+||+|.+.|.|.++...+ ..+. ..++....+
T Consensus 224 VitVS~~~a~ei~~~---~--~~~~gl~~~l~------~~~~kl~~I~NGID~~~~~p~~d~~~~-~~~~~~~~~~k~~~ 291 (489)
T PRK14098 224 LTTTSPRYAEEIAGD---G--EEAFGLDKVLE------ERKMRLHGILNGIDTRQWNPSTDKLIK-KRYSIERLDGKLEN 291 (489)
T ss_pred ceeeCHHHHHHhCcC---C--CCCcChHHHHH------hcCCCeeEEeCCccccccCCccccccc-ccCCcchhhhHHHH
Confidence 999999766643221 0 01123332221 115689999999999999986542110 0000 001111112
Q ss_pred CccccccccccCCCCCcEEEEEecCCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHH
Q 003726 546 PKQNDEHVGILNDRSKPLIFSMARLDGVKNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQ 625 (800)
Q Consensus 546 ~~~~~~~~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~ 625 (800)
+...++.+|+..++++|+|+++||+.+.||++.|++|+.++.+ ++++|+|+|+|+. .+.+.+++++++
T Consensus 292 k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~--~~~~lvivG~G~~----------~~~~~l~~l~~~ 359 (489)
T PRK14098 292 KKALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVE--LDIQLVICGSGDK----------EYEKRFQDFAEE 359 (489)
T ss_pred HHHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHh--cCcEEEEEeCCCH----------HHHHHHHHHHHH
Confidence 2344567888767789999999999999999999999999875 4799999999864 245788888888
Q ss_pred cCCCCcEEEcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcCcccccccccc----CceEEE
Q 003726 626 YNLHGQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH----GVSGFH 701 (800)
Q Consensus 626 ~gL~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~~GG~~EiI~d----g~~G~l 701 (800)
++ ++|.|.| ..+.+++..+++. +|+||+||.+|+||++.+|||+||+|+|+++.||..|+|.+ +.+|++
T Consensus 360 ~~--~~V~~~g----~~~~~~~~~~~a~-aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~~~~~G~l 432 (489)
T PRK14098 360 HP--EQVSVQT----EFTDAFFHLAIAG-LDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDKGSGFI 432 (489)
T ss_pred CC--CCEEEEE----ecCHHHHHHHHHh-CCEEEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeecCCCCCCceeE
Confidence 74 7999998 4556778888886 99999999999999999999999999999999999998864 789999
Q ss_pred ECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003726 702 IDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLTLAGV 758 (800)
Q Consensus 702 v~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 758 (800)
+++.|+++++++|.++++ +..|++.|++++++++ .++|||+.++++|+++|+.
T Consensus 433 ~~~~d~~~la~ai~~~l~-~~~~~~~~~~~~~~~~---~~~fsw~~~a~~y~~lY~~ 485 (489)
T PRK14098 433 FHDYTPEALVAKLGEALA-LYHDEERWEELVLEAM---ERDFSWKNSAEEYAQLYRE 485 (489)
T ss_pred eCCCCHHHHHHHHHHHHH-HHcCHHHHHHHHHHHh---cCCCChHHHHHHHHHHHHH
Confidence 999999999999988764 4478999999987764 3799999999999999963
No 13
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=100.00 E-value=2.7e-41 Score=375.28 Aligned_cols=397 Identities=34% Similarity=0.557 Sum_probs=301.2
Q ss_pred EEEEEccCcCCCCccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCcccccceeecCC
Q 003726 269 NVVIVSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIQNQGLDVIPKILIVTRLIPDAKGTTCNQRLERISGT 348 (800)
Q Consensus 269 rI~ivs~hg~~~~~~~lg~p~tGG~~vyild~araL~~eLa~~L~~~GheV~~~i~VvTr~~p~~~g~~~~~~~e~~~g~ 348 (800)
||+|++.|++|.. --|.|++||.+.++. .|++.|+++||+|+ |+|...+..... .....
T Consensus 1 ~~~~~~~~~~~~~--~~~~~~~GG~~~~~~--------~l~~~L~~~g~~V~----v~~~~~~~~~~~-------~~~~~ 59 (398)
T cd03800 1 RIALISLHGSPLA--QPGGADTGGQNVYVL--------ELARALARLGHEVD----IFTRRIDDALPP-------IVELA 59 (398)
T ss_pred CeEEEeccccccc--cCCCCCCCceeehHH--------HHHHHHhccCceEE----EEEecCCcccCC-------ccccc
Confidence 5889999987632 135689999999999 66666799999999 998654322111 01122
Q ss_pred CCeEEEEeccCCCCccccccccccCChhhHHHHHHHHHHHHHHHhCCCceEEEECCCCchHHHHHHHhcCCCeEEEEecC
Q 003726 349 EHTHILRVPFRTENGILRKWISRFDVWPYLETFAEDASNEIAAELQGVPDLIIGNYSDGNLVATLLSYKLGVTQCNIAHA 428 (800)
Q Consensus 349 ~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~ll~~~~~~PDIIh~h~~~~~lva~lla~~~gip~v~t~H~ 428 (800)
.++.+.+++..+.. ..++..+++++..|...+...+... ..+||+||+|++..+.++..+++..++|+|.+.|+
T Consensus 60 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Div~~~~~~~~~~~~~~~~~~~~~~i~~~h~ 133 (398)
T cd03800 60 PGVRVVRVPAGPAE-----YLPKEELWPYLDEFADDLLRFLRRE-GGRPDLIHAHYWDSGLVALLLARRLGIPLVHTFHS 133 (398)
T ss_pred cceEEEeccccccc-----CCChhhcchhHHHHHHHHHHHHHhc-CCCccEEEEecCccchHHHHHHhhcCCceEEEeec
Confidence 36788888764432 1233345666666666555554432 23899999999988888889999999999999998
Q ss_pred CccccCCCChhhHHhhhhhhccchhhhHHHHHhccCCEEEecCHHHHhhcccCccccccccccccccceeeeccCCCCCC
Q 003726 429 LEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNNADFIITSTYQEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFDP 508 (800)
Q Consensus 429 l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~~ 508 (800)
+...........+. +........+...++.||.|+++|.......... .+. ...
T Consensus 134 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~-------------------~~~--~~~ 187 (398)
T cd03800 134 LGAVKRRHLGAADT-----YEPARRIEAEERLLRAADRVIASTPQEAEELYSL-------------------YGA--YPR 187 (398)
T ss_pred ccccCCcccccccc-----cchhhhhhHHHHHHhhCCEEEEcCHHHHHHHHHH-------------------ccc--ccc
Confidence 76533221111111 1112223456778999999999998765422111 011 144
Q ss_pred ceEEecCCCCCCCCCCCChHHHHHHHhhccccccccCCccccccccccCCCCCcEEEEEecCCCCCCHHHHHHHHHHhhc
Q 003726 509 KFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLYDPKQNDEHVGILNDRSKPLIFSMARLDGVKNLTGLVECYGKSSK 588 (800)
Q Consensus 509 k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~l~~ 588 (800)
++.+||||+|.+.|.+....... ++.++. ..++++|+++||+++.||++.+++++.++.+
T Consensus 188 ~~~vi~ng~~~~~~~~~~~~~~~------------------~~~~~~--~~~~~~i~~~gr~~~~k~~~~ll~a~~~l~~ 247 (398)
T cd03800 188 RIRVVPPGVDLERFTPYGRAEAR------------------RARLLR--DPDKPRILAVGRLDPRKGIDTLIRAYAELPE 247 (398)
T ss_pred ccEEECCCCCccceecccchhhH------------------HHhhcc--CCCCcEEEEEcccccccCHHHHHHHHHHHHH
Confidence 69999999999888765432211 122333 4567899999999999999999999999988
Q ss_pred cCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEcccccCccChHHHHHHHHccCcEEEecCCCCCCc
Q 003726 589 LRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFG 668 (800)
Q Consensus 589 ~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fG 668 (800)
..++++|+++|++..... ......++++++++++.++|.|+| .++.+++..+++. +|++++||..|+||
T Consensus 248 ~~~~~~l~i~G~~~~~~~------~~~~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-adi~l~ps~~e~~~ 316 (398)
T cd03800 248 LRERANLVIVGGPRDDIL------AMDEEELRELARELGVIDRVDFPG----RVSREDLPALYRA-ADVFVNPALYEPFG 316 (398)
T ss_pred hCCCeEEEEEECCCCcch------hhhhHHHHHHHHhcCCCceEEEec----cCCHHHHHHHHHh-CCEEEecccccccC
Confidence 788999999999876211 112345778889999999999999 6677899999997 99999999999999
Q ss_pred HHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHH
Q 003726 669 LTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIY 748 (800)
Q Consensus 669 l~vlEAMA~GlPVIAT~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~ 748 (800)
++++|||+||+|||+++.||..|+|+++.+|+++++.|+++++++|.+++ +|++.+++|++++++.+.++|||+.+
T Consensus 317 ~~l~Ea~a~G~Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~a~~~~~~~~s~~~~ 392 (398)
T cd03800 317 LTALEAMACGLPVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRRLL----TDPALRRRLSRAGLRRARARYTWERV 392 (398)
T ss_pred cHHHHHHhcCCCEEECCCCCHHHHccCCCCeEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhCCHHHH
Confidence 99999999999999999999999999999999999999999999997776 89999999999999999999999999
Q ss_pred HHHHH
Q 003726 749 SERLL 753 (800)
Q Consensus 749 a~~ll 753 (800)
+++++
T Consensus 393 ~~~~~ 397 (398)
T cd03800 393 AARLL 397 (398)
T ss_pred HHHHh
Confidence 99986
No 14
>PRK10307 putative glycosyl transferase; Provisional
Probab=100.00 E-value=1.2e-40 Score=375.87 Aligned_cols=396 Identities=12% Similarity=0.112 Sum_probs=285.1
Q ss_pred eEEEEEccCcCCCCccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHCCCccccceeEEeCCC--CCCC-CCccccccee
Q 003726 268 FNVVIVSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIQNQGLDVIPKILIVTRLI--PDAK-GTTCNQRLER 344 (800)
Q Consensus 268 ~rI~ivs~hg~~~~~~~lg~p~tGG~~vyild~araL~~eLa~~L~~~GheV~~~i~VvTr~~--p~~~-g~~~~~~~e~ 344 (800)
|||+++|.+++| +.||.+.++. +|+++|.++||+|+ |+|+.. |... ..........
T Consensus 1 mkIlii~~~~~P---------~~~g~~~~~~--------~l~~~L~~~G~~V~----vit~~~~~~~~~~~~~~~~~~~~ 59 (412)
T PRK10307 1 MKILVYGINYAP---------ELTGIGKYTG--------EMAEWLAARGHEVR----VITAPPYYPQWRVGEGYSAWRYR 59 (412)
T ss_pred CeEEEEecCCCC---------CccchhhhHH--------HHHHHHHHCCCeEE----EEecCCCCCCCCCCcccccccce
Confidence 799999988774 4689999999 66777799999999 999752 2110 0000101111
Q ss_pred ecCCCCeEEEEeccCCCCccccccccccCChhhHHHHHHHHHHHHHHHhCCCceEEEECCCCc--hHHHHHHHhcCCCeE
Q 003726 345 ISGTEHTHILRVPFRTENGILRKWISRFDVWPYLETFAEDASNEIAAELQGVPDLIIGNYSDG--NLVATLLSYKLGVTQ 422 (800)
Q Consensus 345 ~~g~~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~ll~~~~~~PDIIh~h~~~~--~lva~lla~~~gip~ 422 (800)
....++++++|+|...... ...+. .+..+ ..|.......+.+....+||+||+|.+.. ...+.+++++.|+|+
T Consensus 60 ~~~~~~i~v~r~~~~~~~~--~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~Div~~~~p~~~~~~~~~~~~~~~~~~~ 134 (412)
T PRK10307 60 RESEGGVTVWRCPLYVPKQ--PSGLK--RLLHL-GSFALSSFFPLLAQRRWRPDRVIGVVPTLFCAPGARLLARLSGART 134 (412)
T ss_pred eeecCCeEEEEccccCCCC--ccHHH--HHHHH-HHHHHHHHHHHhhccCCCCCEEEEeCCcHHHHHHHHHHHHhhCCCE
Confidence 1223578999998642110 00011 11111 12333334444443346899999998664 456777888899999
Q ss_pred EEEecCCccccCCCChhhHHhhhhhhccchhhhHHHHHhccCCEEEecCHHHHhhcccCccccccccccccccceeeecc
Q 003726 423 CNIAHALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNNADFIITSTYQEIAGSKNNVGQYENHTAFTLPGLYRVVHG 502 (800)
Q Consensus 423 v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~G 502 (800)
++++|+.+..... .................+..+++.||.||++|....+..++ .|
T Consensus 135 v~~~~d~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~~--------------------~~ 190 (412)
T PRK10307 135 WLHIQDYEVDAAF----GLGLLKGGKVARLATAFERSLLRRFDNVSTISRSMMNKARE--------------------KG 190 (412)
T ss_pred EEEeccCCHHHHH----HhCCccCcHHHHHHHHHHHHHHhhCCEEEecCHHHHHHHHH--------------------cC
Confidence 9999986432100 00000000000001124677899999999999976652211 13
Q ss_pred CCCCCCceEEecCCCCCCCCCCCChHHHHHHHhhccccccccCCccccccccccCCCCCcEEEEEecCCCCCCHHHHHHH
Q 003726 503 IDVFDPKFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLYDPKQNDEHVGILNDRSKPLIFSMARLDGVKNLTGLVEC 582 (800)
Q Consensus 503 i~v~~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA 582 (800)
++ ..++.|||||+|.+.|.|....... ..++.+|+ ++++++|+|+||+.+.||++.|++|
T Consensus 191 ~~--~~~i~vi~ngvd~~~~~~~~~~~~~----------------~~~~~~~~--~~~~~~i~~~G~l~~~kg~~~li~a 250 (412)
T PRK10307 191 VA--AEKVIFFPNWSEVARFQPVADADVD----------------ALRAQLGL--PDGKKIVLYSGNIGEKQGLELVIDA 250 (412)
T ss_pred CC--cccEEEECCCcCHhhcCCCCccchH----------------HHHHHcCC--CCCCEEEEEcCccccccCHHHHHHH
Confidence 33 5689999999999988765322100 11244666 5677899999999999999999999
Q ss_pred HHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEcccccCccChHHHHHHHHccCcEEEecC
Q 003726 583 YGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISAQMNRVRNGELYRYIADTRGVFVQPA 662 (800)
Q Consensus 583 ~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS 662 (800)
++++.+ .++++|+|+|+|+. .+.+++++++++++ +|.|+| .++.+++..+++. +|++|+||
T Consensus 251 ~~~l~~-~~~~~l~ivG~g~~------------~~~l~~~~~~~~l~-~v~f~G----~~~~~~~~~~~~~-aDi~v~ps 311 (412)
T PRK10307 251 ARRLRD-RPDLIFVICGQGGG------------KARLEKMAQCRGLP-NVHFLP----LQPYDRLPALLKM-ADCHLLPQ 311 (412)
T ss_pred HHHhcc-CCCeEEEEECCChh------------HHHHHHHHHHcCCC-ceEEeC----CCCHHHHHHHHHh-cCEeEEee
Confidence 998854 57899999999976 57788899999986 799999 5667899999996 99999999
Q ss_pred CCCC----CcHHHHHHHHcCCcEEEcCccc--cccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 003726 663 FYEA----FGLTVVEAMTCGLPTFATCHGG--PAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGL 736 (800)
Q Consensus 663 ~~E~----fGl~vlEAMA~GlPVIAT~~GG--~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~ 736 (800)
..|+ +|.+++|||+||+|||+|+.|| ..|+++ .+|++++++|++++|++|.+++ +|++.+++|+++|+
T Consensus 312 ~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~~~~~i~--~~G~~~~~~d~~~la~~i~~l~----~~~~~~~~~~~~a~ 385 (412)
T PRK10307 312 KAGAADLVLPSKLTNMLASGRNVVATAEPGTELGQLVE--GIGVCVEPESVEALVAAIAALA----RQALLRPKLGTVAR 385 (412)
T ss_pred ccCcccccCcHHHHHHHHcCCCEEEEeCCCchHHHHHh--CCcEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHH
Confidence 9998 5777899999999999998876 458886 5999999999999999997766 89999999999999
Q ss_pred HHHHHhCCHHHHHHHHHHHHHH
Q 003726 737 KRIYERYTWKIYSERLLTLAGV 758 (800)
Q Consensus 737 ~~v~~~ysw~~~a~~ll~ly~~ 758 (800)
+++.++|||+.++++++++|+.
T Consensus 386 ~~~~~~fs~~~~~~~~~~~~~~ 407 (412)
T PRK10307 386 EYAERTLDKENVLRQFIADIRG 407 (412)
T ss_pred HHHHHHcCHHHHHHHHHHHHHH
Confidence 9999999999999999999874
No 15
>PRK14099 glycogen synthase; Provisional
Probab=100.00 E-value=1.6e-40 Score=382.56 Aligned_cols=437 Identities=17% Similarity=0.209 Sum_probs=287.4
Q ss_pred eeEEEEEccCcCCCCccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCcccc-cceee
Q 003726 267 VFNVVIVSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIQNQGLDVIPKILIVTRLIPDAKGTTCNQ-RLERI 345 (800)
Q Consensus 267 ~~rI~ivs~hg~~~~~~~lg~p~tGG~~vyild~araL~~eLa~~L~~~GheV~~~i~VvTr~~p~~~g~~~~~-~~e~~ 345 (800)
.|||++||....|. ..|||..-++- .|.++|+++||+|. |+++.+..-....... .....
T Consensus 3 ~~~il~v~~E~~p~-------~k~ggl~dv~~--------~lp~~l~~~g~~v~----v~~P~y~~~~~~~~~~~~~~~~ 63 (485)
T PRK14099 3 PLRVLSVASEIFPL-------IKTGGLADVAG--------ALPAALKAHGVEVR----TLVPGYPAVLAGIEDAEQVHSF 63 (485)
T ss_pred CcEEEEEEeccccc-------cCCCcHHHHHH--------HHHHHHHHCCCcEE----EEeCCCcchhhhhcCceEEEEE
Confidence 48999999988765 57999999999 44555689999999 9999876542110000 01111
Q ss_pred cCC-C-CeEEEEeccCCCCc-cc--cccccccC-Ch---------hhHHHHH--HHHHHHHHHHh--CCCceEEEECCCC
Q 003726 346 SGT-E-HTHILRVPFRTENG-IL--RKWISRFD-VW---------PYLETFA--EDASNEIAAEL--QGVPDLIIGNYSD 406 (800)
Q Consensus 346 ~g~-~-~v~I~rvp~~~~~~-~~--~~~isr~~-i~---------~yl~~f~--~~~~~~ll~~~--~~~PDIIh~h~~~ 406 (800)
... . .+++.......-.- ++ ..++.|.. ++ ...++|+ ..++.++...+ +.+|||||+|+|.
T Consensus 64 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~f~r~~~~y~~~~~~~~~d~~~rf~~f~~a~~~~~~~~~~~~~pDIiH~Hdw~ 143 (485)
T PRK14099 64 PDLFGGPARLLAARAGGLDLFVLDAPHLYDRPGNPYVGPDGKDWPDNAQRFAALARAAAAIGQGLVPGFVPDIVHAHDWQ 143 (485)
T ss_pred eeeCCceEEEEEEEeCCceEEEEeChHhhCCCCCCCCCccCCCCCcHHHHHHHHHHHHHHHHhhhccCCCCCEEEECCcH
Confidence 100 0 12222211110000 00 11233332 22 1233433 44555555443 5699999999999
Q ss_pred chHHHHHHHh--cCCCeEEEEecCCcccc-CCCCh-----hhHHhhh-hhhccchhhhHHHHHhccCCEEEecCHHHHhh
Q 003726 407 GNLVATLLSY--KLGVTQCNIAHALEKTK-YPDSD-----LYWRKFE-EKYHFSSQFTADLTAMNNADFIITSTYQEIAG 477 (800)
Q Consensus 407 ~~lva~lla~--~~gip~v~t~H~l~~~~-~~~s~-----~~~~~~~-~~y~f~~~~~~e~~a~~~AD~IIt~S~~ei~~ 477 (800)
+++++.++.. ..++|.|+|+|++.... ++... ..+..+. ....+.......+.+++.||.|+|+|+..++.
T Consensus 144 ~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~~ad~vitVS~~~a~e 223 (485)
T PRK14099 144 AGLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPRELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQLADRITTVSPTYALE 223 (485)
T ss_pred HHHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCHHHHHHcCCChHHcCchhhhhCCCccHHHHHHHhcCeeeecChhHHHH
Confidence 9998887764 34689999999975432 11100 0000000 00001111123466889999999999866553
Q ss_pred cccCccccccccccccccceeeeccCCCCCCceEEecCCCCCCCCCCCChHHHHHHHhhccccccccCCccccccccccC
Q 003726 478 SKNNVGQYENHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLYDPKQNDEHVGILN 557 (800)
Q Consensus 478 ~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~Gll~ 557 (800)
..+.. ..+++.+++ .....|+.+|+||+|.+.|.|.+.......--...++....+....++++|+..
T Consensus 224 i~~~~------~g~gl~~~l------~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~ 291 (485)
T PRK14099 224 IQGPE------AGMGLDGLL------RQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAALQARFGLDP 291 (485)
T ss_pred Hhccc------CCcChHHHH------HhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHHHHHHHcCCCc
Confidence 22110 011111111 112568999999999999988654210000000000000111223456788854
Q ss_pred CCCCcEEEEEecCCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcE-EEcc
Q 003726 558 DRSKPLIFSMARLDGVKNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQF-RWIS 636 (800)
Q Consensus 558 ~~~k~iIl~vGRL~~~Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V-~flG 636 (800)
+++.++|+++||+.+.||++.|++|+.++.+ .+++|+|+|+|.. ...+.+++++++++ +++ .|+|
T Consensus 292 ~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~--~~~~lvivG~G~~----------~~~~~l~~l~~~~~--~~v~~~~G 357 (485)
T PRK14099 292 DPDALLLGVISRLSWQKGLDLLLEALPTLLG--EGAQLALLGSGDA----------ELEARFRAAAQAYP--GQIGVVIG 357 (485)
T ss_pred ccCCcEEEEEecCCccccHHHHHHHHHHHHh--cCcEEEEEecCCH----------HHHHHHHHHHHHCC--CCEEEEeC
Confidence 5678899999999999999999999998865 3699999999864 23567788888775 455 6888
Q ss_pred cccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcCccccccccccC---------ceEEEECCCCH
Q 003726 637 AQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHG---------VSGFHIDPYHP 707 (800)
Q Consensus 637 ~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~~GG~~EiI~dg---------~~G~lv~p~d~ 707 (800)
+ .+++.+++.+++|+||+||++|+||++++|||+||+|+|+|+.||+.|+|.++ .+|++++|+|+
T Consensus 358 ~------~~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~~d~ 431 (485)
T PRK14099 358 Y------DEALAHLIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFSPVTA 431 (485)
T ss_pred C------CHHHHHHHHhcCCEEEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEeCCCCH
Confidence 4 46888887545999999999999999999999999999999999999999876 68999999999
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003726 708 DQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLTLAGV 758 (800)
Q Consensus 708 e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 758 (800)
++++++|.+++. +.+|++.|++|++++++ ++|||+.++++|+++|+.
T Consensus 432 ~~La~ai~~a~~-l~~d~~~~~~l~~~~~~---~~fSw~~~a~~y~~lY~~ 478 (485)
T PRK14099 432 DALAAALRKTAA-LFADPVAWRRLQRNGMT---TDVSWRNPAQHYAALYRS 478 (485)
T ss_pred HHHHHHHHHHHH-HhcCHHHHHHHHHHhhh---hcCChHHHHHHHHHHHHH
Confidence 999999987543 34799999999999873 689999999999999974
No 16
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=100.00 E-value=1.9e-40 Score=372.95 Aligned_cols=365 Identities=17% Similarity=0.213 Sum_probs=272.4
Q ss_pred EEEEEccCcCCCCccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCcccccceeecCC
Q 003726 269 NVVIVSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIQNQGLDVIPKILIVTRLIPDAKGTTCNQRLERISGT 348 (800)
Q Consensus 269 rI~ivs~hg~~~~~~~lg~p~tGG~~vyild~araL~~eLa~~L~~~GheV~~~i~VvTr~~p~~~g~~~~~~~e~~~g~ 348 (800)
||+++++..+| ..||.+.++. +|++.|+++||+|+ |+|...+...+. + ...
T Consensus 1 kI~~v~~~~~p---------~~GG~e~~~~--------~la~~L~~~G~~V~----v~~~~~~~~~~~------~--~~~ 51 (398)
T cd03796 1 RICMVSDFFYP---------NLGGVETHIY--------QLSQCLIKRGHKVV----VITHAYGNRVGI------R--YLT 51 (398)
T ss_pred CeeEEeecccc---------ccccHHHHHH--------HHHHHHHHcCCeeE----EEeccCCcCCCc------c--ccc
Confidence 68999987774 4699999999 67777799999999 998764322111 1 112
Q ss_pred CCeEEEEeccCCCCccccccccccCChhhHHHHHHHHHHHHHHHhCCCceEEEECCCCch--HHHHHHHhcCCCeEEEEe
Q 003726 349 EHTHILRVPFRTENGILRKWISRFDVWPYLETFAEDASNEIAAELQGVPDLIIGNYSDGN--LVATLLSYKLGVTQCNIA 426 (800)
Q Consensus 349 ~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~ll~~~~~~PDIIh~h~~~~~--lva~lla~~~gip~v~t~ 426 (800)
.++.+.++|...... ...+.... .+.. .+..++. +.+|||||+|.+.+. ..+.++++..++|+|++.
T Consensus 52 ~~i~v~~~p~~~~~~-------~~~~~~~~-~~~~-~l~~~~~--~~~~DiIh~~~~~~~~~~~~~~~~~~~~~~~v~t~ 120 (398)
T cd03796 52 NGLKVYYLPFVVFYN-------QSTLPTFF-GTFP-LLRNILI--RERITIVHGHQAFSALAHEALLHARTMGLKTVFTD 120 (398)
T ss_pred CceeEEEecceeccC-------Cccccchh-hhHH-HHHHHHH--hcCCCEEEECCCCchHHHHHHHHhhhcCCcEEEEe
Confidence 367888888643210 00111111 1111 2222332 348999999987653 346677888999999999
Q ss_pred cCCccccCCCChhhHHhhhhhhccchhhhHHHHHhccCCEEEecCHHHHhhcccCccccccccccccccceeeeccCCCC
Q 003726 427 HALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNNADFIITSTYQEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVF 506 (800)
Q Consensus 427 H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~ 506 (800)
|+.... .+..... .. ......++++|.+|++|....+.. ....+++
T Consensus 121 h~~~~~----~~~~~~~----~~-----~~~~~~~~~~d~ii~~s~~~~~~~-------------------~~~~~~~-- 166 (398)
T cd03796 121 HSLFGF----ADASSIH----TN-----KLLRFSLADVDHVICVSHTSKENT-------------------VLRASLD-- 166 (398)
T ss_pred cccccc----cchhhHH----hh-----HHHHHhhccCCEEEEecHhHhhHH-------------------HHHhCCC--
Confidence 986321 1100000 00 113456889999999998654310 0011232
Q ss_pred CCceEEecCCCCCCCCCCCChHHHHHHHhhccccccccCCccccccccccCCCCCcEEEEEecCCCCCCHHHHHHHHHHh
Q 003726 507 DPKFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLYDPKQNDEHVGILNDRSKPLIFSMARLDGVKNLTGLVECYGKS 586 (800)
Q Consensus 507 ~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~l 586 (800)
..++.+||||+|.+.|.|.... .++++++++++||+.+.||++.|++|+..+
T Consensus 167 ~~k~~vi~ngvd~~~f~~~~~~----------------------------~~~~~~~i~~~grl~~~Kg~~~li~a~~~l 218 (398)
T cd03796 167 PERVSVIPNAVDSSDFTPDPSK----------------------------RDNDKITIVVISRLVYRKGIDLLVGIIPEI 218 (398)
T ss_pred hhhEEEEcCccCHHHcCCCccc----------------------------CCCCceEEEEEeccchhcCHHHHHHHHHHH
Confidence 5689999999999888664321 045678999999999999999999999999
Q ss_pred hccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEcccccCccChHHHHHHHHccCcEEEecCCCCC
Q 003726 587 SKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEA 666 (800)
Q Consensus 587 ~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~ 666 (800)
.+..++++|+|+|+|+. .+.+.++++++++.++|.|+| .++.+++..+++. +|++|+||..|+
T Consensus 219 ~~~~~~~~l~i~G~g~~------------~~~l~~~~~~~~l~~~v~~~G----~~~~~~~~~~l~~-ad~~v~pS~~E~ 281 (398)
T cd03796 219 CKKHPNVRFIIGGDGPK------------RILLEEMREKYNLQDRVELLG----AVPHERVRDVLVQ-GHIFLNTSLTEA 281 (398)
T ss_pred HhhCCCEEEEEEeCCch------------HHHHHHHHHHhCCCCeEEEeC----CCCHHHHHHHHHh-CCEEEeCChhhc
Confidence 88889999999999876 567889999999999999999 5667899999996 999999999999
Q ss_pred CcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHH
Q 003726 667 FGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWK 746 (800)
Q Consensus 667 fGl~vlEAMA~GlPVIAT~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~ 746 (800)
||++++|||+||+|||+|+.||..|++.++. ++++++ |+++++++|.+++ .++.....+++++++++.++|||+
T Consensus 282 ~g~~~~EAma~G~PVI~s~~gg~~e~i~~~~-~~~~~~-~~~~l~~~l~~~l----~~~~~~~~~~~~~~~~~~~~fs~~ 355 (398)
T cd03796 282 FCIAIVEAASCGLLVVSTRVGGIPEVLPPDM-ILLAEP-DVESIVRKLEEAI----SILRTGKHDPWSFHNRVKKMYSWE 355 (398)
T ss_pred cCHHHHHHHHcCCCEEECCCCCchhheeCCc-eeecCC-CHHHHHHHHHHHH----hChhhhhhHHHHHHHHHHhhCCHH
Confidence 9999999999999999999999999998764 454544 8999999998877 566556678899999999999999
Q ss_pred HHHHHHHHHHHH
Q 003726 747 IYSERLLTLAGV 758 (800)
Q Consensus 747 ~~a~~ll~ly~~ 758 (800)
.++++++++|+.
T Consensus 356 ~~~~~~~~~y~~ 367 (398)
T cd03796 356 DVAKRTEKVYDR 367 (398)
T ss_pred HHHHHHHHHHHH
Confidence 999999999863
No 17
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=100.00 E-value=2.8e-40 Score=379.72 Aligned_cols=433 Identities=20% Similarity=0.195 Sum_probs=292.4
Q ss_pred EEEEEccCcCCCCccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCcccc--cce---
Q 003726 269 NVVIVSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIQNQGLDVIPKILIVTRLIPDAKGTTCNQ--RLE--- 343 (800)
Q Consensus 269 rI~ivs~hg~~~~~~~lg~p~tGG~~vyild~araL~~eLa~~L~~~GheV~~~i~VvTr~~p~~~g~~~~~--~~e--- 343 (800)
||++||+..+|- ..+||...++. .|+++|++.||+|. |+|+.++......... ...
T Consensus 1 ~Il~v~~E~~p~-------~k~GGl~~~~~--------~L~~aL~~~G~~V~----Vi~p~y~~~~~~~~~~~~~~~~~~ 61 (476)
T cd03791 1 KVLFVASEVAPF-------AKTGGLGDVVG--------ALPKALAKLGHDVR----VIMPKYGRILDELRGQLLVLRLFG 61 (476)
T ss_pred CEEEEEcccccc-------ccCCcHHHHHH--------HHHHHHHHCCCeEE----EEecCCcchhhHhccCeEEEEEEe
Confidence 699999987764 36899999999 55555699999999 9998876532110000 000
Q ss_pred ------------eecCCCCeEEEEeccCCCCccccccc--cccCChh-hHHHHH--HHHHHHHHHHhCCCceEEEECCCC
Q 003726 344 ------------RISGTEHTHILRVPFRTENGILRKWI--SRFDVWP-YLETFA--EDASNEIAAELQGVPDLIIGNYSD 406 (800)
Q Consensus 344 ------------~~~g~~~v~I~rvp~~~~~~~~~~~i--sr~~i~~-yl~~f~--~~~~~~ll~~~~~~PDIIh~h~~~ 406 (800)
.....+++.++++....... +.++ .....|. ...+|. ..+..+++..++.+|||||+|+|+
T Consensus 62 ~~~~~~~~~~~~~~~~~~gv~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~f~~~~~~~l~~~~~~pDviH~hd~~ 139 (476)
T cd03791 62 VPVGGRPEYVGVFELPVDGVPVYFLDNPDYFD--RPGLYDDSGYDYEDNAERFALFSRAALELLRRLGWKPDIIHCHDWH 139 (476)
T ss_pred eccCCceeEEEEEEEEeCCceEEEEcChHHcC--CCCCCCccCCCCccHHHHHHHHHHHHHHHHHhcCCCCcEEEECchH
Confidence 00112356777664322110 0000 0001111 112222 223334444446799999999999
Q ss_pred chHHHHHHHhcC------CCeEEEEecCCccccCCCChhh------H--HhhhhhhccchhhhHHHHHhccCCEEEecCH
Q 003726 407 GNLVATLLSYKL------GVTQCNIAHALEKTKYPDSDLY------W--RKFEEKYHFSSQFTADLTAMNNADFIITSTY 472 (800)
Q Consensus 407 ~~lva~lla~~~------gip~v~t~H~l~~~~~~~s~~~------~--~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~ 472 (800)
+++++.+++... ++|+|+|+|++........... | ......+.+...+..++.++..||.|+++|.
T Consensus 140 t~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~ 219 (476)
T cd03791 140 TGLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEELFHIDGLEFYGQVNFLKAGIVYADAVTTVSP 219 (476)
T ss_pred HHHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccchhhhcccccCCcccHHHHHHHhcCcCeecCH
Confidence 988888888763 8999999999865431110000 0 0001111223344567889999999999998
Q ss_pred HHHhhcccCccccccccccccccceeeeccCCCCCCceEEecCCCCCCCCCCCChHHHHHHHhhccccccccCCcccccc
Q 003726 473 QEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLYDPKQNDEH 552 (800)
Q Consensus 473 ~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~ 552 (800)
...+...+..+ ++++.++ ......|+.+|+||+|.+.|.|.........-.....+....++...+++
T Consensus 220 ~~~~~i~~~~~------~~gl~~~------~~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~~~~~k~~l~~~ 287 (476)
T cd03791 220 TYAREILTPEF------GEGLDGL------LRARAGKLSGILNGIDYDVWNPATDPHLPANYSADDLEGKAENKAALQEE 287 (476)
T ss_pred hHHHHhCCCCC------CcchHHH------HHhccCCeEEEeCCCcCcccCccccchhhhcCCccccccHHHHHHHHHHH
Confidence 66553222100 0011000 01125789999999999999886543211000000011111223344567
Q ss_pred ccccCCCCCcEEEEEecCCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcE
Q 003726 553 VGILNDRSKPLIFSMARLDGVKNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQF 632 (800)
Q Consensus 553 ~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V 632 (800)
+|+..++++++|+++||+.+.||++.+++++.++.+. +++|+|+|+|.. ...+.+.++++++ .++|
T Consensus 288 ~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~--~~~lvi~G~g~~----------~~~~~~~~~~~~~--~~~v 353 (476)
T cd03791 288 LGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLEL--GGQLVILGSGDP----------EYEEALRELAARY--PGRV 353 (476)
T ss_pred cCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHHc--CcEEEEEecCCH----------HHHHHHHHHHHhC--CCcE
Confidence 8875567899999999999999999999999998764 499999999854 3346677777776 4788
Q ss_pred EEcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCc------eEEEECCCC
Q 003726 633 RWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGV------SGFHIDPYH 706 (800)
Q Consensus 633 ~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~~GG~~EiI~dg~------~G~lv~p~d 706 (800)
.+.+ ..+.+.+..+++. +|++++||.+|+||++++|||+||+|||+|+.||..|+|.++. +|++++|.|
T Consensus 354 ~~~~----~~~~~~~~~~~~~-aDv~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~ 428 (476)
T cd03791 354 AVLI----GYDEALAHLIYAG-ADFFLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVFEGYN 428 (476)
T ss_pred EEEE----eCCHHHHHHHHHh-CCEEECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEeCCCC
Confidence 8776 3344555667775 9999999999999999999999999999999999999999988 999999999
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003726 707 PDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLTLAG 757 (800)
Q Consensus 707 ~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 757 (800)
+++++++|.++++. ..+++.|++|++++++ +.|||+.++++|+++|+
T Consensus 429 ~~~l~~~i~~~l~~-~~~~~~~~~~~~~~~~---~~fsw~~~a~~~~~~y~ 475 (476)
T cd03791 429 ADALLAALRRALAL-YRDPEAWRKLQRNAMA---QDFSWDRSAKEYLELYR 475 (476)
T ss_pred HHHHHHHHHHHHHH-HcCHHHHHHHHHHHhc---cCCChHHHHHHHHHHHh
Confidence 99999999987643 3568999999988875 47999999999999985
No 18
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=100.00 E-value=5e-39 Score=363.05 Aligned_cols=281 Identities=19% Similarity=0.260 Sum_probs=230.6
Q ss_pred CCCceEEEECCCCchHHHHHHHh--cCCCeEEEEecCCccccCCCChhhHHhhhhhhccchhhhHHHHHhccCCEEEecC
Q 003726 394 QGVPDLIIGNYSDGNLVATLLSY--KLGVTQCNIAHALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNNADFIITST 471 (800)
Q Consensus 394 ~~~PDIIh~h~~~~~lva~lla~--~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S 471 (800)
+.+||+||+|++..+..+..++. ..+.+.++|+|+....... ....+.. .....+++||+|+++|
T Consensus 116 ~~~~diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~~~~--------~~~~~~~-----~~~~~~~~ad~vv~~S 182 (406)
T PRK15427 116 PFVADVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGIDISSRE--------VLNHYTP-----EYQQLFRRGDLMLPIS 182 (406)
T ss_pred cCCCCEEEEcCChHHHHHHHHHHhCCCCCCeEEEEcccccccch--------hhhhhhH-----HHHHHHHhCCEEEECC
Confidence 45899999999887777777765 3455678899985321100 0001110 1233678999999999
Q ss_pred HHHHhhcccCccccccccccccccceeeeccCCCCCCceEEecCCCCCCCCCCCChHHHHHHHhhccccccccCCccccc
Q 003726 472 YQEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLYDPKQNDE 551 (800)
Q Consensus 472 ~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~ 551 (800)
+...+...+ .|++ ..|+.+||||+|.+.|.+.....
T Consensus 183 ~~~~~~l~~--------------------~g~~--~~ki~vi~nGvd~~~f~~~~~~~---------------------- 218 (406)
T PRK15427 183 DLWAGRLQK--------------------MGCP--PEKIAVSRMGVDMTRFSPRPVKA---------------------- 218 (406)
T ss_pred HHHHHHHHH--------------------cCCC--HHHEEEcCCCCCHHHcCCCcccc----------------------
Confidence 865542110 1333 67899999999999886532110
Q ss_pred cccccCCCCCcEEEEEecCCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCc
Q 003726 552 HVGILNDRSKPLIFSMARLDGVKNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQ 631 (800)
Q Consensus 552 ~~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~ 631 (800)
..++..|+++||+.+.||++.+++|++++.+..++++|+|+|+|+. .++++++++++++.++
T Consensus 219 ------~~~~~~il~vGrl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~G~~------------~~~l~~~~~~~~l~~~ 280 (406)
T PRK15427 219 ------PATPLEIISVARLTEKKGLHVAIEACRQLKEQGVAFRYRILGIGPW------------ERRLRTLIEQYQLEDV 280 (406)
T ss_pred ------CCCCeEEEEEeCcchhcCHHHHHHHHHHHHhhCCCEEEEEEECchh------------HHHHHHHHHHcCCCCe
Confidence 2345679999999999999999999999988788999999999976 6789999999999999
Q ss_pred EEEcccccCccChHHHHHHHHccCcEEEecCCC------CCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCC
Q 003726 632 FRWISAQMNRVRNGELYRYIADTRGVFVQPAFY------EAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPY 705 (800)
Q Consensus 632 V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~------E~fGl~vlEAMA~GlPVIAT~~GG~~EiI~dg~~G~lv~p~ 705 (800)
|.|+| .++.+++..+++. +|+||+||.. |+||++++||||||+|||+|+.||..|+|.++.+|++++|+
T Consensus 281 V~~~G----~~~~~el~~~l~~-aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E~v~~~~~G~lv~~~ 355 (406)
T PRK15427 281 VEMPG----FKPSHEVKAMLDD-ADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEADKSGWLVPEN 355 (406)
T ss_pred EEEeC----CCCHHHHHHHHHh-CCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchhhhcCCCceEEeCCC
Confidence 99999 5667899999996 9999999984 99999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003726 706 HPDQVAELMIEFFEKCYN-DPSHWNKISDGGLKRIYERYTWKIYSERLLTLAGV 758 (800)
Q Consensus 706 d~e~lA~aI~~~l~~l~~-dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 758 (800)
|++++|++|.+++ + ||+.+++|+++|++++.++|+|+.+++++.++|+.
T Consensus 356 d~~~la~ai~~l~----~~d~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~~ 405 (406)
T PRK15427 356 DAQALAQRLAAFS----QLDTDELAPVVKRAREKVETDFNQQVINRELASLLQA 405 (406)
T ss_pred CHHHHHHHHHHHH----hCCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 9999999997776 7 99999999999999999999999999999999864
No 19
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=100.00 E-value=6.1e-39 Score=357.11 Aligned_cols=379 Identities=22% Similarity=0.290 Sum_probs=273.8
Q ss_pred eEEEEEccCcCCCCccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCcccccceeecC
Q 003726 268 FNVVIVSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIQNQGLDVIPKILIVTRLIPDAKGTTCNQRLERISG 347 (800)
Q Consensus 268 ~rI~ivs~hg~~~~~~~lg~p~tGG~~vyild~araL~~eLa~~L~~~GheV~~~i~VvTr~~p~~~g~~~~~~~e~~~g 347 (800)
|||++|+..++|. ..||.++++. +|++.|+++ |+|+ |+|.... . ..
T Consensus 1 mkI~~i~~~~~p~--------~~GG~~~~v~--------~l~~~l~~~-~~v~----v~~~~~~---------~----~~ 46 (388)
T TIGR02149 1 MKVTVLTREYPPN--------VYGGAGVHVE--------ELTRELARL-MDVD----VRCFGDQ---------R----FD 46 (388)
T ss_pred CeeEEEecccCcc--------ccccHhHHHH--------HHHHHHHHh-cCee----EEcCCCc---------h----hc
Confidence 7999998766532 2499999999 555556666 6777 6664321 1 11
Q ss_pred CCCeEEEEeccCCCCccccccccccCChhhHHHHHHHHHHHHHHHhCCCceEEEECCCCchHHHHHHHhcCCCeEEEEec
Q 003726 348 TEHTHILRVPFRTENGILRKWISRFDVWPYLETFAEDASNEIAAELQGVPDLIIGNYSDGNLVATLLSYKLGVTQCNIAH 427 (800)
Q Consensus 348 ~~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~ll~~~~~~PDIIh~h~~~~~lva~lla~~~gip~v~t~H 427 (800)
..++.+.+++..... ......+..+..+.. ......+||+||+|.+..++.+.++++..|+|++++.|
T Consensus 47 ~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~---~~~~~~~~divh~~~~~~~~~~~~~~~~~~~p~v~~~h 114 (388)
T TIGR02149 47 SEGLTVKGYRPWSEL---------KEANKALGTFSVDLA---MANDPVDADVVHSHTWYTFLAGHLAKKLYDKPLVVTAH 114 (388)
T ss_pred CCCeEEEEecChhhc---------cchhhhhhhhhHHHH---HhhCCCCCCeEeecchhhhhHHHHHHHhcCCCEEEEee
Confidence 235677766532210 011111222222211 11113479999999988888788777888999999999
Q ss_pred CCccccCCCChhhHHhhhhhhccchhhhHHHHHhccCCEEEecCHHHHhhcccCccccccccccccccceeeeccCCCCC
Q 003726 428 ALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNNADFIITSTYQEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFD 507 (800)
Q Consensus 428 ~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~ 507 (800)
++......... .....+.+. ...++..++.+|.||++|....+...+. ..|++ .
T Consensus 115 ~~~~~~~~~~~----~~~~~~~~~--~~~~~~~~~~ad~vi~~S~~~~~~~~~~------------------~~~~~--~ 168 (388)
T TIGR02149 115 SLEPLRPWKEE----QLGGGYKLS--SWAEKTAIEAADRVIAVSGGMREDILKY------------------YPDLD--P 168 (388)
T ss_pred ccccccccccc----ccccchhHH--HHHHHHHHhhCCEEEEccHHHHHHHHHH------------------cCCCC--c
Confidence 97532210000 000111111 1246678999999999998765522111 01222 5
Q ss_pred CceEEecCCCCCCCCCCCChHHHHHHHhhccccccccCCccccccccccCCCCCcEEEEEecCCCCCCHHHHHHHHHHhh
Q 003726 508 PKFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLYDPKQNDEHVGILNDRSKPLIFSMARLDGVKNLTGLVECYGKSS 587 (800)
Q Consensus 508 ~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~l~ 587 (800)
.++.|||||+|...|.|...... ++.+|+ ++++++|+++||+.+.||++.|++|+.++.
T Consensus 169 ~~i~vi~ng~~~~~~~~~~~~~~-------------------~~~~~~--~~~~~~i~~~Grl~~~Kg~~~li~a~~~l~ 227 (388)
T TIGR02149 169 EKVHVIYNGIDTKEYKPDDGNVV-------------------LDRYGI--DRSRPYILFVGRITRQKGVPHLLDAVHYIP 227 (388)
T ss_pred ceEEEecCCCChhhcCCCchHHH-------------------HHHhCC--CCCceEEEEEcccccccCHHHHHHHHHHHh
Confidence 68999999999998877543322 134565 667889999999999999999999999874
Q ss_pred ccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCC-CCcEEEcccccCccChHHHHHHHHccCcEEEecCCCCC
Q 003726 588 KLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNL-HGQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEA 666 (800)
Q Consensus 588 ~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL-~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~ 666 (800)
++++++++|++++. .+..+.+++.+++++. .++|.|++ +.++.+++..+++. +|++|+||.+|+
T Consensus 228 ---~~~~l~i~g~g~~~--------~~~~~~~~~~~~~~~~~~~~v~~~~---~~~~~~~~~~~~~~-aDv~v~ps~~e~ 292 (388)
T TIGR02149 228 ---KDVQVVLCAGAPDT--------PEVAEEVRQAVALLDRNRTGIIWIN---KMLPKEELVELLSN-AEVFVCPSIYEP 292 (388)
T ss_pred ---hcCcEEEEeCCCCc--------HHHHHHHHHHHHHhccccCceEEec---CCCCHHHHHHHHHh-CCEEEeCCccCC
Confidence 47899999987651 1234566677777765 34588775 25778999999996 999999999999
Q ss_pred CcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCH------HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 003726 667 FGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHP------DQVAELMIEFFEKCYNDPSHWNKISDGGLKRIY 740 (800)
Q Consensus 667 fGl~vlEAMA~GlPVIAT~~GG~~EiI~dg~~G~lv~p~d~------e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~ 740 (800)
||++++|||+||+|||+|+.||..|+++++.+|++++++|+ ++++++|.+++ +|++.+++|++++++.+.
T Consensus 293 ~g~~~lEA~a~G~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~a~~~~~ 368 (388)
T TIGR02149 293 LGIVNLEAMACGTPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQAELAKAINILL----ADPELAKKMGIAGRKRAE 368 (388)
T ss_pred CChHHHHHHHcCCCEEEeCCCCHHHHhhCCCceEEcCCCCCcccchHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999988 88888886665 899999999999999999
Q ss_pred HhCCHHHHHHHHHHHHHH
Q 003726 741 ERYTWKIYSERLLTLAGV 758 (800)
Q Consensus 741 ~~ysw~~~a~~ll~ly~~ 758 (800)
++|||+.+++++.++|+.
T Consensus 369 ~~~s~~~~~~~~~~~y~~ 386 (388)
T TIGR02149 369 EEFSWGSIAKKTVEMYRK 386 (388)
T ss_pred HhCCHHHHHHHHHHHHHh
Confidence 999999999999999863
No 20
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=1.5e-38 Score=350.77 Aligned_cols=366 Identities=20% Similarity=0.284 Sum_probs=266.8
Q ss_pred eEEEEEccCcCCCCccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCcccccceeecC
Q 003726 268 FNVVIVSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIQNQGLDVIPKILIVTRLIPDAKGTTCNQRLERISG 347 (800)
Q Consensus 268 ~rI~ivs~hg~~~~~~~lg~p~tGG~~vyild~araL~~eLa~~L~~~GheV~~~i~VvTr~~p~~~g~~~~~~~e~~~g 347 (800)
|||++++. |..||.++++. +|++.|+++||+|+ |+|...+... . ..
T Consensus 1 mki~~~~~------------p~~gG~~~~~~--------~la~~L~~~G~~v~----v~~~~~~~~~-------~---~~ 46 (371)
T cd04962 1 MKIGIVCY------------PTYGGSGVVAT--------ELGKALARRGHEVH----FITSSRPFRL-------D---EY 46 (371)
T ss_pred CceeEEEE------------eCCCCccchHH--------HHHHHHHhcCCceE----EEecCCCcch-------h---hh
Confidence 68999973 33599999999 66667799999999 8887532210 0 01
Q ss_pred CCCeEEEEeccCCCCccccccccccCChhhHHHHHHHHHHHHHHHhCCCceEEEECCCCchHHHHHHHhc----CCCeEE
Q 003726 348 TEHTHILRVPFRTENGILRKWISRFDVWPYLETFAEDASNEIAAELQGVPDLIIGNYSDGNLVATLLSYK----LGVTQC 423 (800)
Q Consensus 348 ~~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~ll~~~~~~PDIIh~h~~~~~lva~lla~~----~gip~v 423 (800)
..++.+..++.... + ......+...... ....+++ +.+||+||+|++.....+..++++ .++|++
T Consensus 47 ~~~~~~~~~~~~~~-~-------~~~~~~~~~~~~~-~l~~~i~--~~~~divh~~~~~~~~~~~~~~~~~~~~~~~~~i 115 (371)
T cd04962 47 SPNIFFHEVEVPQY-P-------LFQYPPYDLALAS-KIAEVAK--RYKLDLLHVHYAVPHAVAAYLAREILGKKDLPVV 115 (371)
T ss_pred ccCeEEEEeccccc-c-------hhhcchhHHHHHH-HHHHHHh--cCCccEEeecccCCccHHHHHHHHhcCcCCCcEE
Confidence 11333333332111 0 0111111111122 2222333 349999999987654433333322 379999
Q ss_pred EEecCCccccCCCChhhHHhhhhhhccchhhhHHHHHhccCCEEEecCHHHHhhcccCccccccccccccccceeeeccC
Q 003726 424 NIAHALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNNADFIITSTYQEIAGSKNNVGQYENHTAFTLPGLYRVVHGI 503 (800)
Q Consensus 424 ~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi 503 (800)
++.|+......... ..+. ...+..++.+|.|++.|....+...+. +
T Consensus 116 ~~~h~~~~~~~~~~--------~~~~-----~~~~~~~~~~d~ii~~s~~~~~~~~~~--------------------~- 161 (371)
T cd04962 116 TTLHGTDITLVGQD--------PSFQ-----PATRFSIEKSDGVTAVSESLRQETYEL--------------------F- 161 (371)
T ss_pred EEEcCCcccccccc--------ccch-----HHHHHHHhhCCEEEEcCHHHHHHHHHh--------------------c-
Confidence 99997532111100 0111 123557889999999998765421111 0
Q ss_pred CCCCCceEEecCCCCCCCCCCCChHHHHHHHhhccccccccCCccccccccccCCCCCcEEEEEecCCCCCCHHHHHHHH
Q 003726 504 DVFDPKFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLYDPKQNDEHVGILNDRSKPLIFSMARLDGVKNLTGLVECY 583 (800)
Q Consensus 504 ~v~~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~ 583 (800)
....++.|||||+|...|.+......+ +.+++ .+++++++++||+.+.||++.+++++
T Consensus 162 -~~~~~i~vi~n~~~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~il~~g~l~~~K~~~~li~a~ 219 (371)
T cd04962 162 -DITKEIEVIPNFVDEDRFRPKPDEALK-------------------RRLGA--PEGEKVLIHISNFRPVKRIDDVIRIF 219 (371)
T ss_pred -CCcCCEEEecCCcCHhhcCCCchHHHH-------------------HhcCC--CCCCeEEEEecccccccCHHHHHHHH
Confidence 125689999999999887664432211 23455 56778899999999999999999999
Q ss_pred HHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEcccccCccChHHHHHHHHccCcEEEecCC
Q 003726 584 GKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISAQMNRVRNGELYRYIADTRGVFVQPAF 663 (800)
Q Consensus 584 ~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~ 663 (800)
.++.+. .+++|+++|+|++ .+.++++++++++.++|.|+|.+ +++..+++. +|++|+||.
T Consensus 220 ~~l~~~-~~~~l~i~G~g~~------------~~~~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-~d~~v~ps~ 279 (371)
T cd04962 220 AKVRKE-VPARLLLVGDGPE------------RSPAERLARELGLQDDVLFLGKQ------DHVEELLSI-ADLFLLPSE 279 (371)
T ss_pred HHHHhc-CCceEEEEcCCcC------------HHHHHHHHHHcCCCceEEEecCc------ccHHHHHHh-cCEEEeCCC
Confidence 998765 5699999999977 56788889999999999999943 368888886 999999999
Q ss_pred CCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhC
Q 003726 664 YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERY 743 (800)
Q Consensus 664 ~E~fGl~vlEAMA~GlPVIAT~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~y 743 (800)
.|+||++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.+++ +||+.+.+|++++++.+.++|
T Consensus 280 ~E~~~~~~~EAma~g~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~~~~f 355 (371)
T cd04962 280 KESFGLAALEAMACGVPVVASNAGGIPEVVKHGETGFLVDVGDVEAMAEYALSLL----EDDELWQEFSRAARNRAAERF 355 (371)
T ss_pred cCCCccHHHHHHHcCCCEEEeCCCCchhhhcCCCceEEcCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999997766 899999999999999988999
Q ss_pred CHHHHHHHHHHHHHH
Q 003726 744 TWKIYSERLLTLAGV 758 (800)
Q Consensus 744 sw~~~a~~ll~ly~~ 758 (800)
||+.+++++.++|+.
T Consensus 356 s~~~~~~~~~~~y~~ 370 (371)
T cd04962 356 DSERIVPQYEALYRR 370 (371)
T ss_pred CHHHHHHHHHHHHHh
Confidence 999999999999863
No 21
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=100.00 E-value=1.3e-38 Score=365.81 Aligned_cols=374 Identities=18% Similarity=0.199 Sum_probs=265.2
Q ss_pred CceeEEEEEccCcCCCCccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCccccccee
Q 003726 265 PMVFNVVIVSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIQNQGLDVIPKILIVTRLIPDAKGTTCNQRLER 344 (800)
Q Consensus 265 p~~~rI~ivs~hg~~~~~~~lg~p~tGG~~vyild~araL~~eLa~~L~~~GheV~~~i~VvTr~~p~~~g~~~~~~~e~ 344 (800)
-+.|||++++ +.+|. +..||.+.++. +|++.|+++||+|+ |+|...... +.
T Consensus 56 ~~~mrI~~~~-~~~~~-------~~~gG~~~~~~--------~l~~~L~~~G~eV~----vlt~~~~~~---------~~ 106 (465)
T PLN02871 56 SRPRRIALFV-EPSPF-------SYVSGYKNRFQ--------NFIRYLREMGDEVL----VVTTDEGVP---------QE 106 (465)
T ss_pred CCCceEEEEE-CCcCC-------cccccHHHHHH--------HHHHHHHHCCCeEE----EEecCCCCC---------cc
Confidence 3458999997 33321 45799999999 66666789999999 988653211 01
Q ss_pred ecCCCCeEEEEeccCCCCccccccccccCChhhHHHHHHHHHHHHHHHhCCCceEEEECCCCc-hHHHHHHHhcCCCeEE
Q 003726 345 ISGTEHTHILRVPFRTENGILRKWISRFDVWPYLETFAEDASNEIAAELQGVPDLIIGNYSDG-NLVATLLSYKLGVTQC 423 (800)
Q Consensus 345 ~~g~~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~ll~~~~~~PDIIh~h~~~~-~lva~lla~~~gip~v 423 (800)
..++.+.+++..+. +. ..... +.+ .+... ...+++ +.+|||||+|.+.. .+.+.++++..|+|+|
T Consensus 107 ---~~g~~v~~~~~~~~-~~----~~~~~-~~~--~~~~~-l~~~i~--~~kpDiIh~~~~~~~~~~~~~~ak~~~ip~V 172 (465)
T PLN02871 107 ---FHGAKVIGSWSFPC-PF----YQKVP-LSL--ALSPR-IISEVA--RFKPDLIHASSPGIMVFGALFYAKLLCVPLV 172 (465)
T ss_pred ---ccCceeeccCCcCC-cc----CCCce-eec--cCCHH-HHHHHH--hCCCCEEEECCCchhHHHHHHHHHHhCCCEE
Confidence 11344444322111 00 00000 000 00111 222333 24899999998654 3455667788899999
Q ss_pred EEecCCccccCCCChhhHHhhhhhhccchhhhHHHHHhccCCEEEecCHHHHhhcccCccccccccccccccceeeeccC
Q 003726 424 NIAHALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNNADFIITSTYQEIAGSKNNVGQYENHTAFTLPGLYRVVHGI 503 (800)
Q Consensus 424 ~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi 503 (800)
++.|+......+... +....... +..++..++.+|.|+++|....+...+ .|.
T Consensus 173 ~~~h~~~~~~~~~~~--~~~~~~~~-----~~~~r~~~~~ad~ii~~S~~~~~~l~~--------------------~~~ 225 (465)
T PLN02871 173 MSYHTHVPVYIPRYT--FSWLVKPM-----WDIIRFLHRAADLTLVTSPALGKELEA--------------------AGV 225 (465)
T ss_pred EEEecCchhhhhccc--chhhHHHH-----HHHHHHHHhhCCEEEECCHHHHHHHHH--------------------cCC
Confidence 999986432211111 11111100 123456788999999999876552111 111
Q ss_pred CCCCCceEEecCCCCCCCCCCCChHHHHHHHhhccccccccCCccccccccccCCCCCcEEEEEecCCCCCCHHHHHHHH
Q 003726 504 DVFDPKFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLYDPKQNDEHVGILNDRSKPLIFSMARLDGVKNLTGLVECY 583 (800)
Q Consensus 504 ~v~~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~ 583 (800)
....++.+||||+|.+.|.|........ +.+.. ..+++++|+|+||+.+.||++.+++++
T Consensus 226 -~~~~kv~vi~nGvd~~~f~p~~~~~~~~------------------~~~~~-~~~~~~~i~~vGrl~~~K~~~~li~a~ 285 (465)
T PLN02871 226 -TAANRIRVWNKGVDSESFHPRFRSEEMR------------------ARLSG-GEPEKPLIVYVGRLGAEKNLDFLKRVM 285 (465)
T ss_pred -CCcCeEEEeCCccCccccCCccccHHHH------------------HHhcC-CCCCCeEEEEeCCCchhhhHHHHHHHH
Confidence 1156899999999999997754322111 11111 134678999999999999999999999
Q ss_pred HHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEcccccCccChHHHHHHHHccCcEEEecCC
Q 003726 584 GKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISAQMNRVRNGELYRYIADTRGVFVQPAF 663 (800)
Q Consensus 584 ~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~ 663 (800)
+++ ++++|+|+|+|+. .+.+++++++ .+|.|+| .++.+++..+|+. +|+||+||.
T Consensus 286 ~~~----~~~~l~ivG~G~~------------~~~l~~~~~~----~~V~f~G----~v~~~ev~~~~~~-aDv~V~pS~ 340 (465)
T PLN02871 286 ERL----PGARLAFVGDGPY------------REELEKMFAG----TPTVFTG----MLQGDELSQAYAS-GDVFVMPSE 340 (465)
T ss_pred HhC----CCcEEEEEeCChH------------HHHHHHHhcc----CCeEEec----cCCHHHHHHHHHH-CCEEEECCc
Confidence 876 4799999999876 4566666653 4799999 5667899999996 999999999
Q ss_pred CCCCcHHHHHHHHcCCcEEEcCcccccccccc---CceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 003726 664 YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH---GVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIY 740 (800)
Q Consensus 664 ~E~fGl~vlEAMA~GlPVIAT~~GG~~EiI~d---g~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~ 740 (800)
.|+||++++||||||+|||+|+.||..|++++ +.+|++++|+|+++++++|.+++ +|++.+++|++++++++
T Consensus 341 ~E~~g~~vlEAmA~G~PVI~s~~gg~~eiv~~~~~~~~G~lv~~~d~~~la~~i~~ll----~~~~~~~~~~~~a~~~~- 415 (465)
T PLN02871 341 SETLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEKLETLL----ADPELRERMGAAAREEV- 415 (465)
T ss_pred ccccCcHHHHHHHcCCCEEEcCCCCcHhhhhcCCCCCceEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHH-
Confidence 99999999999999999999999999999999 99999999999999999997776 89999999999999988
Q ss_pred HhCCHHHHHHHHHH-HHHH
Q 003726 741 ERYTWKIYSERLLT-LAGV 758 (800)
Q Consensus 741 ~~ysw~~~a~~ll~-ly~~ 758 (800)
++|||+.+++++++ +|+.
T Consensus 416 ~~fsw~~~a~~l~~~~Y~~ 434 (465)
T PLN02871 416 EKWDWRAATRKLRNEQYSA 434 (465)
T ss_pred HhCCHHHHHHHHHHHHHHH
Confidence 68999999999998 6864
No 22
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=100.00 E-value=1.4e-37 Score=348.26 Aligned_cols=375 Identities=16% Similarity=0.219 Sum_probs=274.9
Q ss_pred ceeEEEEEccCcCCCCccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCcccccceee
Q 003726 266 MVFNVVIVSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIQNQGLDVIPKILIVTRLIPDAKGTTCNQRLERI 345 (800)
Q Consensus 266 ~~~rI~ivs~hg~~~~~~~lg~p~tGG~~vyild~araL~~eLa~~L~~~GheV~~~i~VvTr~~p~~~g~~~~~~~e~~ 345 (800)
|+-||++++.--+|-|. ...||.++++. +++++|+. +|+ |+|...+.-. ..+
T Consensus 1 ~~~~~~~~~~~~~~~p~-----~~~g~ve~~~~--------~~~~~l~~---~~~----~~~~~~~~~~------~~~-- 52 (380)
T PRK15484 1 MIDKIIFTVTPIFSIPP-----RGAAAVETWIY--------QVAKRTSI---PNR----IACIKNPGYP------EYT-- 52 (380)
T ss_pred CCceEEEEeccCCCCCC-----ccccHHHHHHH--------HhhhhccC---Cee----EEEecCCCCC------chh--
Confidence 77899999887777542 34689999999 66666643 899 9998765310 111
Q ss_pred cCCCCeEEEEeccCCCCc-cccccccccCChhhHHHHHHHHHHHHHHHhCCCceEEEECCCCchHHHHHHHhcCCCeEEE
Q 003726 346 SGTEHTHILRVPFRTENG-ILRKWISRFDVWPYLETFAEDASNEIAAELQGVPDLIIGNYSDGNLVATLLSYKLGVTQCN 424 (800)
Q Consensus 346 ~g~~~v~I~rvp~~~~~~-~~~~~isr~~i~~yl~~f~~~~~~~ll~~~~~~PDIIh~h~~~~~lva~lla~~~gip~v~ 424 (800)
...+|+.+.++++..... ...+|.+- .-+ .|.......+......++||||+|... .+...+..+..+++++.
T Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~vi~v~~~~-~~~~~~~~~~~~~~~v~ 126 (380)
T PRK15484 53 KVNDNCDIHYIGFSRIYKRLFQKWTRL-DPL----PYSQRILNIAHKFTITKDSVIVIHNSM-KLYRQIRERAPQAKLVM 126 (380)
T ss_pred hccCCCceEEEEeccccchhhhhhhcc-Cch----hHHHHHHHHHHhcCCCCCcEEEEeCcH-HhHHHHHhhCCCCCEEE
Confidence 112356777776643211 11222221 122 233333333322224579999999755 34555555666789999
Q ss_pred EecCCccccCCCChhhHHhhhhhhccchhhhHHHHHhccCCEEEecCHHHHhhcccCccccccccccccccceeeeccCC
Q 003726 425 IAHALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNNADFIITSTYQEIAGSKNNVGQYENHTAFTLPGLYRVVHGID 504 (800)
Q Consensus 425 t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~ 504 (800)
+.|..... ..++.++.||++|....+... .+.
T Consensus 127 ~~h~~~~~--------------------------~~~~~~~~ii~~S~~~~~~~~---------------------~~~- 158 (380)
T PRK15484 127 HMHNAFEP--------------------------ELLDKNAKIIVPSQFLKKFYE---------------------ERL- 158 (380)
T ss_pred EEecccCh--------------------------hHhccCCEEEEcCHHHHHHHH---------------------hhC-
Confidence 99974210 123467899999986554211 011
Q ss_pred CCCCceEEecCCCCCCCCCCCChHHHHHHHhhccccccccCCccccccccccCCCCCcEEEEEecCCCCCCHHHHHHHHH
Q 003726 505 VFDPKFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLYDPKQNDEHVGILNDRSKPLIFSMARLDGVKNLTGLVECYG 584 (800)
Q Consensus 505 v~~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~~ 584 (800)
...++.|||||+|.+.|.+...... ++.+|+ ++++++|+|+||+.+.||++.|++|+.
T Consensus 159 -~~~~i~vIpngvd~~~~~~~~~~~~-------------------~~~~~~--~~~~~~il~~Grl~~~Kg~~~Li~A~~ 216 (380)
T PRK15484 159 -PNADISIVPNGFCLETYQSNPQPNL-------------------RQQLNI--SPDETVLLYAGRISPDKGILLLMQAFE 216 (380)
T ss_pred -CCCCEEEecCCCCHHHcCCcchHHH-------------------HHHhCC--CCCCeEEEEeccCccccCHHHHHHHHH
Confidence 2567999999999988876443221 134565 556788999999999999999999999
Q ss_pred HhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEcccccCccChHHHHHHHHccCcEEEecCCC
Q 003726 585 KSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFY 664 (800)
Q Consensus 585 ~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~ 664 (800)
++.+..|+++|+|+|++... ...+...+.+.+++++++++ .+|.|+| .++.+++..+++. +|++|+||.+
T Consensus 217 ~l~~~~p~~~lvivG~g~~~---~~~~~~~~~~~l~~~~~~l~--~~v~~~G----~~~~~~l~~~~~~-aDv~v~pS~~ 286 (380)
T PRK15484 217 KLATAHSNLKLVVVGDPTAS---SKGEKAAYQKKVLEAAKRIG--DRCIMLG----GQPPEKMHNYYPL-ADLVVVPSQV 286 (380)
T ss_pred HHHHhCCCeEEEEEeCCccc---cccchhHHHHHHHHHHHhcC--CcEEEeC----CCCHHHHHHHHHh-CCEEEeCCCC
Confidence 99888899999999998652 11233345667778887776 6899999 5667899999996 9999999985
Q ss_pred -CCCcHHHHHHHHcCCcEEEcCccccccccccCceEE-EECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh
Q 003726 665 -EAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGF-HIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYER 742 (800)
Q Consensus 665 -E~fGl~vlEAMA~GlPVIAT~~GG~~EiI~dg~~G~-lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ 742 (800)
|+||++++||||||+|||+|+.||..|++.++.+|+ +++|.|+++++++|.+++ +|++. .+|++++++.+.++
T Consensus 287 ~E~f~~~~lEAma~G~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll----~d~~~-~~~~~~ar~~~~~~ 361 (380)
T PRK15484 287 EEAFCMVAVEAMAAGKPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINRTL----ADPEL-TQIAEQAKDFVFSK 361 (380)
T ss_pred ccccccHHHHHHHcCCCEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHHHH----cCHHH-HHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999 568999999999997766 88885 78999999999999
Q ss_pred CCHHHHHHHHHHHHHHh
Q 003726 743 YTWKIYSERLLTLAGVY 759 (800)
Q Consensus 743 ysw~~~a~~ll~ly~~~ 759 (800)
|||+.++++++++|..+
T Consensus 362 fsw~~~a~~~~~~l~~~ 378 (380)
T PRK15484 362 YSWEGVTQRFEEQIHNW 378 (380)
T ss_pred CCHHHHHHHHHHHHHHh
Confidence 99999999999998653
No 23
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=100.00 E-value=1.1e-37 Score=350.32 Aligned_cols=367 Identities=16% Similarity=0.215 Sum_probs=248.9
Q ss_pred HHHHHHHHCCCccccceeEEeCCCCCCCCCcccccceeecCCCCeEEEEeccCCCCccccccccccCChhhHHHHH----
Q 003726 307 EMLLRIQNQGLDVIPKILIVTRLIPDAKGTTCNQRLERISGTEHTHILRVPFRTENGILRKWISRFDVWPYLETFA---- 382 (800)
Q Consensus 307 eLa~~L~~~GheV~~~i~VvTr~~p~~~g~~~~~~~e~~~g~~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~---- 382 (800)
+||+.|+++||+|+ |+|....... .+ |+++++++..+... ...++|...+.
T Consensus 15 ~la~~L~~~G~~v~----~~~~~~~~~~-----------~~--~v~~~~~~~~~~~~--------~~~~~~~~~~~~~~~ 69 (396)
T cd03818 15 HLAPALAAQGHEVV----FLTEPNAAPP-----------PG--GVRVVRYRPPRGPT--------SGTHPYLREFEEAVL 69 (396)
T ss_pred HHHHHHHHCCCEEE----EEecCCCCCC-----------CC--CeeEEEecCCCCCC--------CCCCccchhHHHHHH
Confidence 57777899999999 9987743210 11 58888887553311 12334433332
Q ss_pred --HHHHHHHHH--HhCCCceEEEECCCCchHHHHHHHhc-CCCeEEEEecCCccccCC---CC-hhhHHhhhhhhccchh
Q 003726 383 --EDASNEIAA--ELQGVPDLIIGNYSDGNLVATLLSYK-LGVTQCNIAHALEKTKYP---DS-DLYWRKFEEKYHFSSQ 453 (800)
Q Consensus 383 --~~~~~~ll~--~~~~~PDIIh~h~~~~~lva~lla~~-~gip~v~t~H~l~~~~~~---~s-~~~~~~~~~~y~f~~~ 453 (800)
..+...+.. ..+.+|||||+|...+. +..+++. .++|+|...|.+...... .. ...... ....+....
T Consensus 70 ~~~~~~~~~~~~~~~~~~pdvi~~h~~~~~--~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 146 (396)
T cd03818 70 RGQAVARALLALRAKGFRPDVIVAHPGWGE--TLFLKDVWPDAPLIGYFEFYYRAEGADVGFDPEFPPSL-DDALRLRNR 146 (396)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEECCccch--hhhHHHhCCCCCEEEEEeeeecCCCCCCCCCCCCCCch-hHHHHHHHh
Confidence 112222222 22568999999976542 2234444 358888766532211100 00 000000 000010111
Q ss_pred hhHHHHHhccCCEEEecCHHHHhhcccCccccccccccccccceeeeccCCCCCCceEEecCCCCCCCCCCCChHHHHHH
Q 003726 454 FTADLTAMNNADFIITSTYQEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSDKEKRLI 533 (800)
Q Consensus 454 ~~~e~~a~~~AD~IIt~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~~k~~VIpnGvD~~~f~p~~~~~~rl~ 533 (800)
.......++.||.||++|....+..+. .+..|+.|||||+|.+.|.|........
T Consensus 147 ~~~~~~~~~~ad~vi~~s~~~~~~~~~------------------------~~~~ki~vI~ngvd~~~f~~~~~~~~~~- 201 (396)
T cd03818 147 NALILLALAQADAGVSPTRWQRSTFPA------------------------ELRSRISVIHDGIDTDRLRPDPQARLRL- 201 (396)
T ss_pred hhHhHHHHHhCCEEECCCHHHHhhCcH------------------------hhccceEEeCCCccccccCCCchhhhcc-
Confidence 112346799999999999876552110 1146899999999999998764332111
Q ss_pred HhhccccccccCCccccccccccCCCCCcEEEEEec-CCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHH
Q 003726 534 ALHGQIEDLLYDPKQNDEHVGILNDRSKPLIFSMAR-LDGVKNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREE 612 (800)
Q Consensus 534 ~~~~~~~~~l~~~~~~~~~~Gll~~~~k~iIl~vGR-L~~~Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~ 612 (800)
+...++ .+++++|+|+|| +.+.||++.+++|++++.+..++++|+|+|++...........
T Consensus 202 ----------------~~~~~~--~~~~~~i~~vgR~l~~~Kg~~~ll~a~~~l~~~~~~~~lvivG~~~~~~g~~~~~~ 263 (396)
T cd03818 202 ----------------PNGRVL--TPGDEVITFVARNLEPYRGFHVFMRALPRLLRARPDARVVIVGGDGVSYGAPPPDG 263 (396)
T ss_pred ----------------cccccC--CCCCeEEEEECCCcccccCHHHHHHHHHHHHHHCCCcEEEEEcCCCcccCCCCCCc
Confidence 011222 457789999998 9999999999999999988889999999998532111000000
Q ss_pred HHHHHHH-HHHHHHcCCCCcEEEcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcCcccccc
Q 003726 613 MAEIEKM-HGLIKQYNLHGQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAE 691 (800)
Q Consensus 613 ~~~~~~l-~~li~~~gL~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~~GG~~E 691 (800)
..+.+++ .++..+++ .++|.|+| .++.+++..+++. +|++|+||..|++|++++||||||+|||+|+.||..|
T Consensus 264 ~~~~~~~~~~~~~~~~-~~~V~f~G----~v~~~~~~~~l~~-adv~v~~s~~e~~~~~llEAmA~G~PVIas~~~g~~e 337 (396)
T cd03818 264 ESWKQHMLDELGGRLD-LSRVHFLG----RVPYDQYLALLQV-SDVHVYLTYPFVLSWSLLEAMACGCLVVGSDTAPVRE 337 (396)
T ss_pred ccHHHHHHHHhhcccC-cceEEEeC----CCCHHHHHHHHHh-CcEEEEcCcccccchHHHHHHHCCCCEEEcCCCCchh
Confidence 0112222 22222222 47899999 6677899999996 9999999999999999999999999999999999999
Q ss_pred ccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 003726 692 IIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLT 754 (800)
Q Consensus 692 iI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ 754 (800)
+|.++.+|++++++|++++|++|.+++ +|++.+.+|+++|++++.++|||+.++++|++
T Consensus 338 ~i~~~~~G~lv~~~d~~~la~~i~~ll----~~~~~~~~l~~~ar~~~~~~fs~~~~~~~~~~ 396 (396)
T cd03818 338 VITDGENGLLVDFFDPDALAAAVIELL----DDPARRARLRRAARRTALRYDLLSVCLPRQLA 396 (396)
T ss_pred hcccCCceEEcCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhccHHHHHHHHhC
Confidence 999999999999999999999997776 89999999999999999999999999999863
No 24
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=100.00 E-value=5.2e-37 Score=342.09 Aligned_cols=386 Identities=20% Similarity=0.266 Sum_probs=262.9
Q ss_pred eEEEEEccCcCCCCccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCcccccceeecC
Q 003726 268 FNVVIVSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIQNQGLDVIPKILIVTRLIPDAKGTTCNQRLERISG 347 (800)
Q Consensus 268 ~rI~ivs~hg~~~~~~~lg~p~tGG~~vyild~araL~~eLa~~L~~~GheV~~~i~VvTr~~p~~~g~~~~~~~e~~~g 347 (800)
|||+++.|... .||.++++. +||++|+++||+|+ |+|...+.. .+ .+...+
T Consensus 1 mkIl~~~~~~~-----------~gG~e~~~~--------~la~~L~~~G~~V~----v~~~~~~~~---~~---~~~~~~ 51 (392)
T cd03805 1 LRVAFIHPDLG-----------IGGAERLVV--------DAALALQSRGHEVT----IYTSHHDPS---HC---FEETKD 51 (392)
T ss_pred CeEEEECCCCC-----------CchHHHHHH--------HHHHHHHhCCCeEE----EEcCCCCch---hc---chhccC
Confidence 79999986543 489999999 66666799999999 998642211 00 011111
Q ss_pred CCCeEEEEeccCCCCccccccccccCChhhHHHHHHHHHHHHH--HHhCCCceEEEECCCCchHHHHHHHhcCCCeEEEE
Q 003726 348 TEHTHILRVPFRTENGILRKWISRFDVWPYLETFAEDASNEIA--AELQGVPDLIIGNYSDGNLVATLLSYKLGVTQCNI 425 (800)
Q Consensus 348 ~~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~ll--~~~~~~PDIIh~h~~~~~lva~lla~~~gip~v~t 425 (800)
.++.+...+...... ..++. ..+..+.......+. .....++|+||+|....+... +....+.|++++
T Consensus 52 -~~~~i~~~~~~~~~~----~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~~~--~~~~~~~~~i~~ 121 (392)
T cd03805 52 -GTLPVRVRGDWLPRS----IFGRF---HILCAYLRMLYLALYLLLLPDEKYDVFIVDQVSACVPL--LKLFSPSKILFY 121 (392)
T ss_pred -CeeEEEEEeEEEcch----hhHhH---HHHHHHHHHHHHHHHHHhcccCCCCEEEEcCcchHHHH--HHHhcCCcEEEE
Confidence 113332221100000 01110 011111111111111 112458999999876543332 233334889999
Q ss_pred ecCCccccCCCChhhHHhhhhhhccchhhhHHHHHhccCCEEEecCHHHHhhcccCccccccccccccccceeeeccCCC
Q 003726 426 AHALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNNADFIITSTYQEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDV 505 (800)
Q Consensus 426 ~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v 505 (800)
.|...... ......++.+ ++.. ....|..+++.||.|+++|....+...+.. ....
T Consensus 122 ~h~~~~~~-~~~~~~~~~~---~~~~-~~~~e~~~~~~ad~ii~~s~~~~~~~~~~~------------------~~~~- 177 (392)
T cd03805 122 CHFPDQLL-AQRGSLLKRL---YRKP-FDWLEEFTTGMADKIVVNSNFTASVFKKTF------------------PSLA- 177 (392)
T ss_pred EecChHHh-cCCCcHHHHH---HHHH-HHHHHHHHhhCceEEEEcChhHHHHHHHHh------------------cccc-
Confidence 99432110 0000011111 1110 112467789999999999986554211110 1111
Q ss_pred CCCceEEecCCCCCCCCCCCChHHHHHHHhhccccccccCCccccccccccCCCCCcEEEEEecCCCCCCHHHHHHHHHH
Q 003726 506 FDPKFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLYDPKQNDEHVGILNDRSKPLIFSMARLDGVKNLTGLVECYGK 585 (800)
Q Consensus 506 ~~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~ 585 (800)
..++.||+||+|.+.|.|...... .+..+. .++.++++++||+.+.||++.+++|+.+
T Consensus 178 -~~~~~vi~n~vd~~~~~~~~~~~~-------------------~~~~~~--~~~~~~i~~~grl~~~Kg~~~ll~a~~~ 235 (392)
T cd03805 178 -KNPREVVYPCVDTDSFESTSEDPD-------------------PGLLIP--KSGKKTFLSINRFERKKNIALAIEAFAI 235 (392)
T ss_pred -cCCcceeCCCcCHHHcCccccccc-------------------cccccc--CCCceEEEEEeeecccCChHHHHHHHHH
Confidence 234569999999988876432210 011222 4677899999999999999999999999
Q ss_pred hhccC---CCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHH-cCCCCcEEEcccccCccChHHHHHHHHccCcEEEec
Q 003726 586 SSKLR---ELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQ-YNLHGQFRWISAQMNRVRNGELYRYIADTRGVFVQP 661 (800)
Q Consensus 586 l~~~~---~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~-~gL~~~V~flG~~~~~v~~~el~~~ia~aadvfV~P 661 (800)
+.+.. ++++|+++|+++.. ..++..+.+++++++++ +++.++|.|+| .++.+++..+++. +|++++|
T Consensus 236 l~~~~~~~~~~~l~i~G~~~~~----~~~~~~~~~~l~~~~~~~~~l~~~V~f~g----~~~~~~~~~~l~~-ad~~l~~ 306 (392)
T cd03805 236 LKDKLAEFKNVRLVIAGGYDPR----VAENVEYLEELQRLAEELLLLEDQVIFLP----SISDSQKELLLSS-ARALLYT 306 (392)
T ss_pred HHhhcccccCeEEEEEcCCCCC----CchhHHHHHHHHHHHHHhcCCCceEEEeC----CCChHHHHHHHhh-CeEEEEC
Confidence 98775 79999999998651 12234556889999999 99999999999 5667899999986 9999999
Q ss_pred CCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Q 003726 662 AFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYE 741 (800)
Q Consensus 662 S~~E~fGl~vlEAMA~GlPVIAT~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~ 741 (800)
|..|+||++++|||+||+|||+|+.||..|++.++.+|+++++ |+++++++|.+++ +|++.+++|+++|++++.+
T Consensus 307 s~~E~~g~~~lEAma~G~PvI~s~~~~~~e~i~~~~~g~~~~~-~~~~~a~~i~~l~----~~~~~~~~~~~~a~~~~~~ 381 (392)
T cd03805 307 PSNEHFGIVPLEAMYAGKPVIACNSGGPLETVVDGETGFLCEP-TPEEFAEAMLKLA----NDPDLADRMGAAGRKRVKE 381 (392)
T ss_pred CCcCCCCchHHHHHHcCCCEEEECCCCcHHHhccCCceEEeCC-CHHHHHHHHHHHH----hChHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999976 8999999997776 8999999999999999999
Q ss_pred hCCHHHHHHHH
Q 003726 742 RYTWKIYSERL 752 (800)
Q Consensus 742 ~ysw~~~a~~l 752 (800)
+|||+.+++++
T Consensus 382 ~~s~~~~~~~~ 392 (392)
T cd03805 382 KFSTEAFAERL 392 (392)
T ss_pred hcCHHHHhhhC
Confidence 99999998864
No 25
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=100.00 E-value=1.5e-36 Score=337.10 Aligned_cols=365 Identities=17% Similarity=0.209 Sum_probs=261.5
Q ss_pred EEEEEccCcCCCCccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCcccccceeecCC
Q 003726 269 NVVIVSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIQNQGLDVIPKILIVTRLIPDAKGTTCNQRLERISGT 348 (800)
Q Consensus 269 rI~ivs~hg~~~~~~~lg~p~tGG~~vyild~araL~~eLa~~L~~~GheV~~~i~VvTr~~p~~~g~~~~~~~e~~~g~ 348 (800)
||++|.++. +.||.+.++. .|++.|.+.|+++. |++....+ .... .. ..
T Consensus 3 ~il~ii~~~-----------~~GG~e~~~~--------~l~~~l~~~~~~~~----v~~~~~~~----~~~~---~~-~~ 51 (374)
T TIGR03088 3 LIVHVVYRF-----------DVGGLENGLV--------NLINHLPADRYRHA----VVALTEVS----AFRK---RI-QR 51 (374)
T ss_pred eEEEEeCCC-----------CCCcHHHHHH--------HHHhhccccccceE----EEEcCCCC----hhHH---HH-Hh
Confidence 677777554 3599999999 55566788899987 77642111 1111 11 11
Q ss_pred CCeEEEEeccCCCCccccccccccCChhhHHHHHHHHHHHHHHHhCCCceEEEECCCCchHHHHHHHhcCCCeE-EEEec
Q 003726 349 EHTHILRVPFRTENGILRKWISRFDVWPYLETFAEDASNEIAAELQGVPDLIIGNYSDGNLVATLLSYKLGVTQ-CNIAH 427 (800)
Q Consensus 349 ~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~ll~~~~~~PDIIh~h~~~~~lva~lla~~~gip~-v~t~H 427 (800)
.++.+++++.... ..+ .+...+. .+++. .+|||||+|...+ ..+.++++..++|. +.+.|
T Consensus 52 ~~i~~~~~~~~~~-----------~~~----~~~~~l~-~~l~~--~~~Divh~~~~~~-~~~~~~~~~~~~~~~i~~~h 112 (374)
T TIGR03088 52 PDVAFYALHKQPG-----------KDV----AVYPQLY-RLLRQ--LRPDIVHTRNLAA-LEAQLPAALAGVPARIHGEH 112 (374)
T ss_pred cCceEEEeCCCCC-----------CCh----HHHHHHH-HHHHH--hCCCEEEEcchhH-HHHHHHHHhcCCCeEEEeec
Confidence 2567777654321 011 1112222 22332 3899999997654 33455666667764 34445
Q ss_pred CCccccCCCChhhHHhhhhhhccchhhhHHHHHhccCCEEEecCHHHHhhcccCccccccccccccccceeeeccCCCCC
Q 003726 428 ALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNNADFIITSTYQEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFD 507 (800)
Q Consensus 428 ~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~ 507 (800)
....... ....| .+.+ ..+...+.+|.+|++|....+...+. .|++ .
T Consensus 113 ~~~~~~~--~~~~~-----~~~~-----~~~~~~~~~~~~i~vs~~~~~~~~~~-------------------~~~~--~ 159 (374)
T TIGR03088 113 GRDVFDL--DGSNW-----KYRW-----LRRLYRPLIHHYVAVSRDLEDWLRGP-------------------VKVP--P 159 (374)
T ss_pred Ccccccc--hhhHH-----HHHH-----HHHHHHhcCCeEEEeCHHHHHHHHHh-------------------cCCC--h
Confidence 4321110 01111 1111 22345567899999998765522111 1222 5
Q ss_pred CceEEecCCCCCCCCCCCChHHHHHHHhhccccccccCCccccccccccCCCCCcEEEEEecCCCCCCHHHHHHHHHHhh
Q 003726 508 PKFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLYDPKQNDEHVGILNDRSKPLIFSMARLDGVKNLTGLVECYGKSS 587 (800)
Q Consensus 508 ~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~l~ 587 (800)
.++.+||||+|.+.|.|......... +.... .+++++|+++||+++.||++.+++|+.++.
T Consensus 160 ~~~~vi~ngvd~~~~~~~~~~~~~~~-----------------~~~~~--~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~ 220 (374)
T TIGR03088 160 AKIHQIYNGVDTERFHPSRGDRSPIL-----------------PPDFF--ADESVVVGTVGRLQAVKDQPTLVRAFALLV 220 (374)
T ss_pred hhEEEeccCccccccCCCccchhhhh-----------------HhhcC--CCCCeEEEEEecCCcccCHHHHHHHHHHHH
Confidence 78999999999998876532211100 01111 456789999999999999999999999987
Q ss_pred ccCC----CeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEcccccCccChHHHHHHHHccCcEEEecCC
Q 003726 588 KLRE----LVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISAQMNRVRNGELYRYIADTRGVFVQPAF 663 (800)
Q Consensus 588 ~~~~----~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~ 663 (800)
+..+ +++|+++|+|+. .+.++++++++++.++|.|.|.+ +++..+++. +|++|+||.
T Consensus 221 ~~~~~~~~~~~l~i~G~g~~------------~~~~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-adi~v~pS~ 281 (374)
T TIGR03088 221 RQLPEGAERLRLVIVGDGPA------------RGACEQMVRAAGLAHLVWLPGER------DDVPALMQA-LDLFVLPSL 281 (374)
T ss_pred HhCcccccceEEEEecCCch------------HHHHHHHHHHcCCcceEEEcCCc------CCHHHHHHh-cCEEEeccc
Confidence 6544 799999999876 56788899999999999999842 468888886 999999999
Q ss_pred CCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhC
Q 003726 664 YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERY 743 (800)
Q Consensus 664 ~E~fGl~vlEAMA~GlPVIAT~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~y 743 (800)
.|+||++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|..++ .|++.+.+|+++|++++.++|
T Consensus 282 ~Eg~~~~~lEAma~G~Pvv~s~~~g~~e~i~~~~~g~~~~~~d~~~la~~i~~l~----~~~~~~~~~~~~a~~~~~~~f 357 (374)
T TIGR03088 282 AEGISNTILEAMASGLPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQPYV----SDPAARRAHGAAGRARAEQQF 357 (374)
T ss_pred cccCchHHHHHHHcCCCEEEcCCCCcHHHhcCCCceEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999997766 899999999999999999999
Q ss_pred CHHHHHHHHHHHHHH
Q 003726 744 TWKIYSERLLTLAGV 758 (800)
Q Consensus 744 sw~~~a~~ll~ly~~ 758 (800)
||+.++++++++|+.
T Consensus 358 s~~~~~~~~~~~y~~ 372 (374)
T TIGR03088 358 SINAMVAAYAGLYDQ 372 (374)
T ss_pred CHHHHHHHHHHHHHH
Confidence 999999999999864
No 26
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=100.00 E-value=7.7e-37 Score=347.19 Aligned_cols=400 Identities=17% Similarity=0.152 Sum_probs=277.1
Q ss_pred CCCCCCchHHHHHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCcccccceeecCCCCeEEEEeccCCCCc--
Q 003726 286 GLPDTGGQVVYILDQVRALENEMLLRIQNQGLDVIPKILIVTRLIPDAKGTTCNQRLERISGTEHTHILRVPFRTENG-- 363 (800)
Q Consensus 286 g~p~tGG~~vyild~araL~~eLa~~L~~~GheV~~~i~VvTr~~p~~~g~~~~~~~e~~~g~~~v~I~rvp~~~~~~-- 363 (800)
|+...||.++.+..+|-++++...+.=+-.|+.|.-.|.+++|.+....|..+....-...+.++..+-+++-..++.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (578)
T PRK15490 169 GSLGSGGAERQISRLAIEIARKYRQKGKIGGLKVEEPVELIIRSLTPELRQDFFLKEVLEEQVEVLEIAKITGNLFDDAT 248 (578)
T ss_pred cCCCCCchHHHHHHHHHHHHHHHHhcccccccccccceeEEEeecCcccCcchhHHHHHhcCCceEEeeccchhhhhhcc
Confidence 445579999999988887766655555556778888888999998877776654332222444455555655222111
Q ss_pred ----cccccccccCChhhHHHHHHHHHHHHHHHhCCCceEEEECCCCchHHHHHHHhcCCCeEEEE-ecCCccccCCCCh
Q 003726 364 ----ILRKWISRFDVWPYLETFAEDASNEIAAELQGVPDLIIGNYSDGNLVATLLSYKLGVTQCNI-AHALEKTKYPDSD 438 (800)
Q Consensus 364 ----~~~~~isr~~i~~yl~~f~~~~~~~ll~~~~~~PDIIh~h~~~~~lva~lla~~~gip~v~t-~H~l~~~~~~~s~ 438 (800)
.++.+++. +.|- ..+.......+++ ..+|||||+|...+++.+.++++..|+|++++ .|... +..
T Consensus 249 ~~~~~~~~~~~~--~~~~-~~~~~~~l~~~ir--~~rpDIVHt~~~~a~l~g~laA~lagvpviv~~~h~~~----~~~- 318 (578)
T PRK15490 249 IESPELRLLLSH--LPPV-CKYGIKHLVPHLC--ERKLDYLSVWQDGACLMIALAALIAGVPRIQLGLRGLP----PVV- 318 (578)
T ss_pred ccchHHHHHHhc--CChH-HHHHHHHHHHHHH--HcCCCEEEEcCcccHHHHHHHHHhcCCCEEEEeecccC----Ccc-
Confidence 11111111 1111 1222333344444 34999999999888888999999999998654 56521 111
Q ss_pred hhHHhhhhhhccchhhhHHHHHhccCCEEEecCHHHHhhcccCccccccccccccccceeeeccCCCCCCceEEecCCCC
Q 003726 439 LYWRKFEEKYHFSSQFTADLTAMNNADFIITSTYQEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFDPKFNIVSPGAD 518 (800)
Q Consensus 439 ~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~~k~~VIpnGvD 518 (800)
.-..+...+....+ .......+| +++.|....+. + ....|++ ..|+.|||||+|
T Consensus 319 -~~r~~~~e~~~~~~---a~~i~~~sd-~v~~s~~v~~~-------l------------~~~lgip--~~KI~VIyNGVD 372 (578)
T PRK15490 319 -RKRLFKPEYEPLYQ---ALAVVPGVD-FMSNNHCVTRH-------Y------------ADWLKLE--AKHFQVVYNGVL 372 (578)
T ss_pred -hhhHHHHHHHHhhh---hceeEecch-hhhccHHHHHH-------H------------HHHhCCC--HHHEEEEeCCcc
Confidence 00111111110000 001233344 44444432221 1 0111333 779999999999
Q ss_pred CCCCCCCChHHHHHHHhhccccccccCCccccccccccCCCCCcEEEEEecCCCCCCHHHHHHHHHHhhccCCCeEEEEE
Q 003726 519 MCIYFPYSDKEKRLIALHGQIEDLLYDPKQNDEHVGILNDRSKPLIFSMARLDGVKNLTGLVECYGKSSKLRELVNLVVV 598 (800)
Q Consensus 519 ~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~l~~~~~~v~LvIV 598 (800)
...|.|.......... +...++ +++.++|+++||+...||...+++++.++.+..++++|+|+
T Consensus 373 ~~rf~p~~~~~~~~r~---------------~~~~~l--~~~~~vIg~VgRl~~~Kg~~~LI~A~a~llk~~pdirLvIV 435 (578)
T PRK15490 373 PPSTEPSSEVPHKIWQ---------------QFTQKT--QDADTTIGGVFRFVGDKNPFAWIDFAARYLQHHPATRFVLV 435 (578)
T ss_pred hhhcCccchhhHHHHH---------------Hhhhcc--CCCCcEEEEEEEEehhcCHHHHHHHHHHHHhHCCCeEEEEE
Confidence 9988875432111000 001233 34567899999999999999999999998877899999999
Q ss_pred eccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcC
Q 003726 599 GGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCG 678 (800)
Q Consensus 599 G~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~G 678 (800)
|+|+. .++++++++++++.++|.|+|++ .++..+|+. +|+||+||.+|+||++++|||+||
T Consensus 436 GdG~~------------~eeLk~la~elgL~d~V~FlG~~------~Dv~~~Laa-ADVfVlPS~~EGfp~vlLEAMA~G 496 (578)
T PRK15490 436 GDGDL------------RAEAQKRAEQLGILERILFVGAS------RDVGYWLQK-MNVFILFSRYEGLPNVLIEAQMVG 496 (578)
T ss_pred eCchh------------HHHHHHHHHHcCCCCcEEECCCh------hhHHHHHHh-CCEEEEcccccCccHHHHHHHHhC
Confidence 99976 67889999999999999999952 468888886 999999999999999999999999
Q ss_pred CcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003726 679 LPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLTLAGV 758 (800)
Q Consensus 679 lPVIAT~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 758 (800)
+|||+|+.||..|+|.+|.+|+++++.|++++++++..+ ..+..+.+....|+++|++++.++|||+.++++|+++|..
T Consensus 497 lPVVATdvGG~~EiV~dG~nG~LVp~~D~~aLa~ai~lA-~aL~~ll~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 497 VPVISTPAGGSAECFIEGVSGFILDDAQTVNLDQACRYA-EKLVNLWRSRTGICQQTQSFLQERFTVEHMVGTFVKTIAS 575 (578)
T ss_pred CCEEEeCCCCcHHHcccCCcEEEECCCChhhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999998887432 2233455556679999999999999999999999999874
No 27
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=100.00 E-value=1.2e-37 Score=328.13 Aligned_cols=363 Identities=17% Similarity=0.213 Sum_probs=280.7
Q ss_pred eEEEEEccCcCCCCccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCcccccceeecC
Q 003726 268 FNVVIVSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIQNQGLDVIPKILIVTRLIPDAKGTTCNQRLERISG 347 (800)
Q Consensus 268 ~rI~ivs~hg~~~~~~~lg~p~tGG~~vyild~araL~~eLa~~L~~~GheV~~~i~VvTr~~p~~~g~~~~~~~e~~~g 347 (800)
++|++||+|+|| .+||.+.++. .|++.|.+.||.|. |+|-.+.+..|-++-
T Consensus 1 ~~i~mVsdff~P---------~~ggveshiy--------~lSq~li~lghkVv----vithayg~r~giryl-------- 51 (426)
T KOG1111|consen 1 SRILMVSDFFYP---------STGGVESHIY--------ALSQCLIRLGHKVV----VITHAYGNRVGIRYL-------- 51 (426)
T ss_pred CcceeeCccccc---------CCCChhhhHH--------HhhcchhhcCCeEE----EEeccccCccceeee--------
Confidence 479999999995 4699999999 88999999999998 999988777554332
Q ss_pred CCCeEEEEeccCCCCccccccccccCChhhHHHHHHHHHHHHHHHhCCCceEEEECCCCchH--HHHHHHhcCCCeEEEE
Q 003726 348 TEHTHILRVPFRTENGILRKWISRFDVWPYLETFAEDASNEIAAELQGVPDLIIGNYSDGNL--VATLLSYKLGVTQCNI 425 (800)
Q Consensus 348 ~~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~ll~~~~~~PDIIh~h~~~~~l--va~lla~~~gip~v~t 425 (800)
+.+..++.+|+... .+....|.+...+.-....++++ +..|||+|.+.+.+ -+.+.++.+|...|+|
T Consensus 52 t~glkVyylp~~v~--------~n~tT~ptv~~~~Pllr~i~lrE---~I~ivhghs~fS~lahe~l~hartMGlktVfT 120 (426)
T KOG1111|consen 52 TNGLKVYYLPAVVG--------YNQTTFPTVFSDFPLLRPILLRE---RIEIVHGHSPFSYLAHEALMHARTMGLKTVFT 120 (426)
T ss_pred cCCceEEEEeeeee--------ecccchhhhhccCcccchhhhhh---ceEEEecCChHHHHHHHHHHHHHhcCceEEEe
Confidence 33678888877542 22223332222222222233333 89999999988744 5777889999999999
Q ss_pred ecCCccccCCCChhhHHhhhhhhccchhhhHHHHHhccCCEEEecCHHHHhhcccCccccccccccccccceeeeccCCC
Q 003726 426 AHALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNNADFIITSTYQEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDV 505 (800)
Q Consensus 426 ~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v 505 (800)
-|++.. ..+..-..... .++ ..+...|.+||+|+...+++ .+...++
T Consensus 121 dHSlfG----fad~~si~~n~----ll~-----~sL~~id~~IcVshtskent-------------------vlr~~L~- 167 (426)
T KOG1111|consen 121 DHSLFG----FADIGSILTNK----LLP-----LSLANIDRIICVSHTSKENT-------------------VLRGALA- 167 (426)
T ss_pred cccccc----ccchhhhhhcc----eee-----eeecCCCcEEEEeecCCCce-------------------EEEeccC-
Confidence 999743 22222111111 122 37889999999998543311 1122333
Q ss_pred CCCceEEecCCCCCCCCCCCChHHHHHHHhhccccccccCCccccccccccCCCCCcEEEEEecCCCCCCHHHHHHHHHH
Q 003726 506 FDPKFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLYDPKQNDEHVGILNDRSKPLIFSMARLDGVKNLTGLVECYGK 585 (800)
Q Consensus 506 ~~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~ 585 (800)
..|+.+|||.++.+.|.|..... .+.+...|+.++||..+||+|.|++.+.+
T Consensus 168 -p~kvsvIPnAv~~~~f~P~~~~~---------------------------~S~~i~~ivv~sRLvyrKGiDll~~iIp~ 219 (426)
T KOG1111|consen 168 -PAKVSVIPNAVVTHTFTPDAADK---------------------------PSADIITIVVASRLVYRKGIDLLLEIIPS 219 (426)
T ss_pred -HhHeeeccceeeccccccCcccc---------------------------CCCCeeEEEEEeeeeeccchHHHHHHHHH
Confidence 77999999999999999954321 03344789999999999999999999999
Q ss_pred hhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEcccccCccChHHHHHHHHccCcEEEecCCCC
Q 003726 586 SSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYE 665 (800)
Q Consensus 586 l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E 665 (800)
+.+.+|+++++|+|+||. ...+++..+++.+.++|.++| .++.+++.+.+.. .|+|+.||+.|
T Consensus 220 vc~~~p~vrfii~GDGPk------------~i~lee~lEk~~l~~rV~~lG----~v~h~~Vr~vl~~-G~IFlntSlTE 282 (426)
T KOG1111|consen 220 VCDKHPEVRFIIIGDGPK------------RIDLEEMLEKLFLQDRVVMLG----TVPHDRVRDVLVR-GDIFLNTSLTE 282 (426)
T ss_pred HHhcCCCeeEEEecCCcc------------cchHHHHHHHhhccCceEEec----ccchHHHHHHHhc-CcEEeccHHHH
Confidence 999999999999999998 567888899999999999999 6778999999997 99999999999
Q ss_pred CCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCH
Q 003726 666 AFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTW 745 (800)
Q Consensus 666 ~fGl~vlEAMA~GlPVIAT~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw 745 (800)
+||++++|||+||+|||+|+.||.+|++.++ . .......++++++++.+++.++...|.. --+++.+.|+|
T Consensus 283 afc~~ivEAaScGL~VVsTrVGGIpeVLP~d-~-i~~~~~~~~dl~~~v~~ai~~~~~~p~~-------~h~~v~~~y~w 353 (426)
T KOG1111|consen 283 AFCMVIVEAASCGLPVVSTRVGGIPEVLPED-M-ITLGEPGPDDLVGAVEKAITKLRTLPLE-------FHDRVKKMYSW 353 (426)
T ss_pred HHHHHHHHHHhCCCEEEEeecCCccccCCcc-c-eeccCCChHHHHHHHHHHHHHhccCchh-------HHHHHHHhccH
Confidence 9999999999999999999999999999765 2 3344557999999999999888877543 24467788999
Q ss_pred HHHHHHHHHHHH
Q 003726 746 KIYSERLLTLAG 757 (800)
Q Consensus 746 ~~~a~~ll~ly~ 757 (800)
+..+++.+.+|.
T Consensus 354 ~dVa~rTekvy~ 365 (426)
T KOG1111|consen 354 KDVAERTEKVYD 365 (426)
T ss_pred HHHHHHHHHHHH
Confidence 999999999863
No 28
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=100.00 E-value=8.9e-37 Score=336.15 Aligned_cols=280 Identities=21% Similarity=0.313 Sum_probs=230.5
Q ss_pred CCceEEEECCCCchHHHHHHHhcCCCeEEEEecCCccccCCCChhhHHhhhhhhccchhhhHHHHHhccCCEEEecCHHH
Q 003726 395 GVPDLIIGNYSDGNLVATLLSYKLGVTQCNIAHALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNNADFIITSTYQE 474 (800)
Q Consensus 395 ~~PDIIh~h~~~~~lva~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~e 474 (800)
.+||+||+|....+..+..++++.|+|++++.|+........... .. .+ ......+...++.+|.|+++|+..
T Consensus 81 ~~~dvvh~~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~----~~-~~--~~~~~~~~~~~~~~d~ii~~s~~~ 153 (367)
T cd05844 81 HRPDLVHAHFGFDGVYALPLARRLGVPLVVTFHGFDATTSLALLL----RS-RW--ALYARRRRRLARRAALFIAVSQFI 153 (367)
T ss_pred hCCCEEEeccCchHHHHHHHHHHcCCCEEEEEeCccccccchhhc----cc-ch--hHHHHHHHHHHHhcCEEEECCHHH
Confidence 489999999877778888888999999999999754322111100 00 00 001123456788999999999866
Q ss_pred HhhcccCccccccccccccccceeeeccCCCCCCceEEecCCCCCCCCCCCChHHHHHHHhhccccccccCCcccccccc
Q 003726 475 IAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLYDPKQNDEHVG 554 (800)
Q Consensus 475 i~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~G 554 (800)
.+...+ .|++ ..++.++|||+|.+.|.+...
T Consensus 154 ~~~~~~--------------------~~~~--~~~i~vi~~g~d~~~~~~~~~--------------------------- 184 (367)
T cd05844 154 RDRLLA--------------------LGFP--PEKVHVHPIGVDTAKFTPATP--------------------------- 184 (367)
T ss_pred HHHHHH--------------------cCCC--HHHeEEecCCCCHHhcCCCCC---------------------------
Confidence 552110 1332 668999999999987765311
Q ss_pred ccCCCCCcEEEEEecCCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEE
Q 003726 555 ILNDRSKPLIFSMARLDGVKNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRW 634 (800)
Q Consensus 555 ll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~f 634 (800)
..+++.++++|++.+.||++.+++|+.++.+..++++|+|+|+++. .++++++++++++.++|.|
T Consensus 185 ---~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~ivG~g~~------------~~~~~~~~~~~~~~~~v~~ 249 (367)
T cd05844 185 ---ARRPPRILFVGRFVEKKGPLLLLEAFARLARRVPEVRLVIIGDGPL------------LAALEALARALGLGGRVTF 249 (367)
T ss_pred ---CCCCcEEEEEEeeccccChHHHHHHHHHHHHhCCCeEEEEEeCchH------------HHHHHHHHHHcCCCCeEEE
Confidence 2356789999999999999999999999988788999999998865 5678889999999999999
Q ss_pred cccccCccChHHHHHHHHccCcEEEecCC------CCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHH
Q 003726 635 ISAQMNRVRNGELYRYIADTRGVFVQPAF------YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPD 708 (800)
Q Consensus 635 lG~~~~~v~~~el~~~ia~aadvfV~PS~------~E~fGl~vlEAMA~GlPVIAT~~GG~~EiI~dg~~G~lv~p~d~e 708 (800)
+| .++.+++..+++. +|++|+||. .|+||++++|||+||+|||+|+.||..|++.++.+|+++++.|++
T Consensus 250 ~g----~~~~~~l~~~~~~-ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i~~~~~g~~~~~~d~~ 324 (367)
T cd05844 250 LG----AQPHAEVRELMRR-ARIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDGETGLLVPEGDVA 324 (367)
T ss_pred CC----CCCHHHHHHHHHh-CCEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCCchhheecCCeeEEECCCCHH
Confidence 99 5677899999996 999999997 599999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 003726 709 QVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLT 754 (800)
Q Consensus 709 ~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ 754 (800)
+++++|.+++ +|++.+++|+.++++++.++|||+.+++++.+
T Consensus 325 ~l~~~i~~l~----~~~~~~~~~~~~a~~~~~~~~s~~~~~~~l~~ 366 (367)
T cd05844 325 ALAAALGRLL----ADPDLRARMGAAGRRRVEERFDLRRQTAKLEA 366 (367)
T ss_pred HHHHHHHHHH----cCHHHHHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 9999997776 89999999999999999999999999999876
No 29
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=1.2e-35 Score=325.64 Aligned_cols=361 Identities=18% Similarity=0.200 Sum_probs=255.1
Q ss_pred EEEEEccCcCCCCccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCcccccceeecCC
Q 003726 269 NVVIVSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIQNQGLDVIPKILIVTRLIPDAKGTTCNQRLERISGT 348 (800)
Q Consensus 269 rI~ivs~hg~~~~~~~lg~p~tGG~~vyild~araL~~eLa~~L~~~GheV~~~i~VvTr~~p~~~g~~~~~~~e~~~g~ 348 (800)
||+||+.+++|. ..||++.++. +|++.|.++||+|+ |+|........ ....
T Consensus 1 ~i~~i~~~~~~~--------~~gG~~~~~~--------~la~~L~~~g~~v~----v~~~~~~~~~~---------~~~~ 51 (363)
T cd04955 1 KIAIIGTRGIPA--------KYGGFETFVE--------ELAPRLVARGHEVT----VYCRSPYPKQK---------ETEY 51 (363)
T ss_pred CeEEEecCcCCc--------ccCcHHHHHH--------HHHHHHHhcCCCEE----EEEccCCCCCc---------cccc
Confidence 699999999863 4699999999 66667799999999 98876332210 1122
Q ss_pred CCeEEEEeccCCCCccccccccccCChhhHHHHHHHHHHHHHHHhCCCceEEEECCCCchHHHHHHHhcCCCeEEEEecC
Q 003726 349 EHTHILRVPFRTENGILRKWISRFDVWPYLETFAEDASNEIAAELQGVPDLIIGNYSDGNLVATLLSYKLGVTQCNIAHA 428 (800)
Q Consensus 349 ~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~ll~~~~~~PDIIh~h~~~~~lva~lla~~~gip~v~t~H~ 428 (800)
.++++.++|.....+ ...+.+ .......... ...++|+||...+.. ..+..++++.++|++++.|+
T Consensus 52 ~~i~~~~~~~~~~~~--------~~~~~~----~~~~~~~~~~-~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~v~~~h~ 117 (363)
T cd04955 52 NGVRLIHIPAPEIGG--------LGTIIY----DILAILHALF-VKRDIDHVHALGPAI-APFLPLLRLKGKKVVVNMDG 117 (363)
T ss_pred CCceEEEcCCCCccc--------hhhhHH----HHHHHHHHHh-ccCCeEEEEecCccH-HHHHHHHHhcCCCEEEEccC
Confidence 367888877543111 000000 0001111111 134667777665555 33344455569999999998
Q ss_pred CccccCCCChhhHHhhhhhhccchhhhHHHHHhccCCEEEecCHHHHhhcccCccccccccccccccceeeeccCCCCCC
Q 003726 429 LEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNNADFIITSTYQEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFDP 508 (800)
Q Consensus 429 l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~~ 508 (800)
...... .|......+ ....+..+++.||.||++|+...+..+.. .|. +
T Consensus 118 ~~~~~~-----~~~~~~~~~----~~~~~~~~~~~ad~ii~~s~~~~~~~~~~-------------------~~~----~ 165 (363)
T cd04955 118 LEWKRA-----KWGRPAKRY----LKFGEKLAVKFADRLIADSPGIKEYLKEK-------------------YGR----D 165 (363)
T ss_pred cceeec-----ccccchhHH----HHHHHHHHHhhccEEEeCCHHHHHHHHHh-------------------cCC----C
Confidence 643221 111111111 11345678899999999998765522111 122 1
Q ss_pred ceEEecCCCCCCCCCCCChHHHHHHHhhccccccccCCccccccccccCCCCCcEEEEEecCCCCCCHHHHHHHHHHhhc
Q 003726 509 KFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLYDPKQNDEHVGILNDRSKPLIFSMARLDGVKNLTGLVECYGKSSK 588 (800)
Q Consensus 509 k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~l~~ 588 (800)
..+||||+|...+.+.... .+..+. ++++.++++||+.+.||++.+++|++++..
T Consensus 166 -~~~i~ngv~~~~~~~~~~~---------------------~~~~~~---~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~ 220 (363)
T cd04955 166 -STYIPYGADHVVSSEEDEI---------------------LKKYGL---EPGRYYLLVGRIVPENNIDDLIEAFSKSNS 220 (363)
T ss_pred -CeeeCCCcChhhcchhhhh---------------------HHhcCC---CCCcEEEEEecccccCCHHHHHHHHHhhcc
Confidence 2899999999876541110 012333 234568899999999999999999998754
Q ss_pred cCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHH-HcCCCCcEEEcccccCccChHHHHHHHHccCcEEEecCCC-CC
Q 003726 589 LRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIK-QYNLHGQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFY-EA 666 (800)
Q Consensus 589 ~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~-~~gL~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~-E~ 666 (800)
+++|+++|+++. ...+.+.+. .+++.++|+|+| .++.+++..+++. +|++++||.. |+
T Consensus 221 ---~~~l~ivG~~~~------------~~~~~~~~~~~~~~~~~V~~~g----~~~~~~~~~~~~~-ad~~v~ps~~~e~ 280 (363)
T cd04955 221 ---GKKLVIVGNADH------------NTPYGKLLKEKAAADPRIIFVG----PIYDQELLELLRY-AALFYLHGHSVGG 280 (363)
T ss_pred ---CceEEEEcCCCC------------cchHHHHHHHHhCCCCcEEEcc----ccChHHHHHHHHh-CCEEEeCCccCCC
Confidence 799999999865 122333333 677889999999 5667899999996 9999999998 99
Q ss_pred CcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHH
Q 003726 667 FGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWK 746 (800)
Q Consensus 667 fGl~vlEAMA~GlPVIAT~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~ 746 (800)
||++++|||+||+|||+|+.|+..|++.+ +|+++++.|. ++++|..++ +|++.+.++++++++.+.++|||+
T Consensus 281 ~~~~~~EAma~G~PvI~s~~~~~~e~~~~--~g~~~~~~~~--l~~~i~~l~----~~~~~~~~~~~~~~~~~~~~fs~~ 352 (363)
T cd04955 281 TNPSLLEAMAYGCPVLASDNPFNREVLGD--KAIYFKVGDD--LASLLEELE----ADPEEVSAMAKAARERIREKYTWE 352 (363)
T ss_pred CChHHHHHHHcCCCEEEecCCccceeecC--CeeEecCchH--HHHHHHHHH----hCHHHHHHHHHHHHHHHHHhCCHH
Confidence 99999999999999999999999999965 7899988775 888886666 899999999999999998899999
Q ss_pred HHHHHHHHHHH
Q 003726 747 IYSERLLTLAG 757 (800)
Q Consensus 747 ~~a~~ll~ly~ 757 (800)
.++++++++|+
T Consensus 353 ~~~~~~~~~y~ 363 (363)
T cd04955 353 KIADQYEELYK 363 (363)
T ss_pred HHHHHHHHHhC
Confidence 99999999874
No 30
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=100.00 E-value=4.3e-36 Score=354.93 Aligned_cols=298 Identities=15% Similarity=0.200 Sum_probs=223.5
Q ss_pred HHHHHHHhCCCceEEEECCCCchHHHHHHHhcCCCeEEE-EecCCccccCCCChhhHHhhhhhhccchhhhHHHHHhccC
Q 003726 386 SNEIAAELQGVPDLIIGNYSDGNLVATLLSYKLGVTQCN-IAHALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNNA 464 (800)
Q Consensus 386 ~~~ll~~~~~~PDIIh~h~~~~~lva~lla~~~gip~v~-t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~A 464 (800)
+.++++. .+|||||+|.+.+++++.++++..++|+++ +.|++.....+ . .++ ..+.. ....+....+
T Consensus 392 L~~~lk~--~kpDIVH~h~~~a~~lg~lAa~~~gvPvIv~t~h~~~~~~~~--~-~~~---~~~~~----l~~~l~~~~~ 459 (694)
T PRK15179 392 LTDVMRS--SVPSVVHIWQDGSIFACALAALLAGVPRIVLSVRTMPPVDRP--D-RYR---VEYDI----IYSELLKMRG 459 (694)
T ss_pred HHHHHHH--cCCcEEEEeCCcHHHHHHHHHHHcCCCEEEEEeCCCccccch--h-HHH---HHHHH----HHHHHHhcCC
Confidence 3334443 389999999999988899999989999876 55765322111 1 111 11111 1111222345
Q ss_pred CEEEecCHHHHhhcccCccccccccccccccceeeeccCCCCCCceEEecCCCCCCCCCCCChHHHHHHHhhcccccccc
Q 003726 465 DFIITSTYQEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLY 544 (800)
Q Consensus 465 D~IIt~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~ 544 (800)
+.+|+.|....+... ...|++ ..|+.|||||+|...|.+.........
T Consensus 460 ~i~Vs~S~~~~~~l~-------------------~~~g~~--~~kI~VI~NGVd~~~f~~~~~~~~~~~----------- 507 (694)
T PRK15179 460 VALSSNSQFAAHRYA-------------------DWLGVD--ERRIPVVYNGLAPLKSVQDDACTAMMA----------- 507 (694)
T ss_pred eEEEeCcHHHHHHHH-------------------HHcCCC--hhHEEEECCCcCHHhcCCCchhhHHHH-----------
Confidence 566777765433110 011333 679999999999988865332211100
Q ss_pred CCccccccccccCCCCCcEEEEEecCCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHH
Q 003726 545 DPKQNDEHVGILNDRSKPLIFSMARLDGVKNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIK 624 (800)
Q Consensus 545 ~~~~~~~~~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~ 624 (800)
.+....+++.++|+++||+.+.||++.|++|++++.+..++++|+|+|+|+. .++++++++
T Consensus 508 -------~~~~~~~~~~~vIg~VGRL~~~KG~~~LI~A~a~l~~~~p~~~LvIvG~G~~------------~~~L~~l~~ 568 (694)
T PRK15179 508 -------QFDARTSDARFTVGTVMRVDDNKRPFLWVEAAQRFAASHPKVRFIMVGGGPL------------LESVREFAQ 568 (694)
T ss_pred -------hhccccCCCCeEEEEEEeCCccCCHHHHHHHHHHHHHHCcCeEEEEEccCcc------------hHHHHHHHH
Confidence 0111113456789999999999999999999999988889999999999977 578899999
Q ss_pred HcCCCCcEEEcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECC
Q 003726 625 QYNLHGQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDP 704 (800)
Q Consensus 625 ~~gL~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~~GG~~EiI~dg~~G~lv~p 704 (800)
++++.++|.|+|++ +++..+++. +|+||+||.+|+||++++|||+||+|||+|+.||+.|+|.++.+|++++|
T Consensus 569 ~lgL~~~V~flG~~------~dv~~ll~a-aDv~VlpS~~Egfp~vlLEAMA~G~PVVat~~gG~~EiV~dg~~GlLv~~ 641 (694)
T PRK15179 569 RLGMGERILFTGLS------RRVGYWLTQ-FNAFLLLSRFEGLPNVLIEAQFSGVPVVTTLAGGAGEAVQEGVTGLTLPA 641 (694)
T ss_pred HcCCCCcEEEcCCc------chHHHHHHh-cCEEEeccccccchHHHHHHHHcCCeEEEECCCChHHHccCCCCEEEeCC
Confidence 99999999999954 357788886 99999999999999999999999999999999999999999999999998
Q ss_pred CCH--HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003726 705 YHP--DQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLTLAG 757 (800)
Q Consensus 705 ~d~--e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 757 (800)
+|. ++++++|.+++..+..++ .+++++++++.++|||+.++++++++|+
T Consensus 642 ~d~~~~~La~aL~~ll~~l~~~~----~l~~~ar~~a~~~FS~~~~~~~~~~lY~ 692 (694)
T PRK15179 642 DTVTAPDVAEALARIHDMCAADP----GIARKAADWASARFSLNQMIASTVRCYQ 692 (694)
T ss_pred CCCChHHHHHHHHHHHhChhccH----HHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 774 689999988875444444 5678899999999999999999999985
No 31
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=100.00 E-value=4.2e-36 Score=334.23 Aligned_cols=287 Identities=21% Similarity=0.217 Sum_probs=215.4
Q ss_pred CCCceEEEECCCCchHHHHHHHhcCCCeEEEEecCCccccCCCChhhHHhhhhhhccchhhhHHHHHhccCCEEEecCHH
Q 003726 394 QGVPDLIIGNYSDGNLVATLLSYKLGVTQCNIAHALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNNADFIITSTYQ 473 (800)
Q Consensus 394 ~~~PDIIh~h~~~~~lva~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 473 (800)
..+|||||+|++....+ ..+++..++|++.+.|...... ....|+ .....++.+|.+++.|.+
T Consensus 83 ~~~~Dvv~~h~~~~~~~-~~~~~~~~~~~i~~~H~~~~~~---~~~~~~-------------~~~~~~~~~d~~i~~~~~ 145 (372)
T cd03792 83 DLDADVVVIHDPQPLAL-PLFKKKRGRPWIWRCHIDLSSP---NRRVWD-------------FLQPYIEDYDAAVFHLPE 145 (372)
T ss_pred cCCCCEEEECCCCchhH-HHhhhcCCCeEEEEeeeecCCC---cHHHHH-------------HHHHHHHhCCEEeecHHH
Confidence 45899999998875333 2233334899999999743211 111111 113356789999988843
Q ss_pred HHhhcccCccccccccccccccceeeeccCCCCCCceEEecCCCCCCCCC--CCChHHHHHHHhhccccccccCCccccc
Q 003726 474 EIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYF--PYSDKEKRLIALHGQIEDLLYDPKQNDE 551 (800)
Q Consensus 474 ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~~k~~VIpnGvD~~~f~--p~~~~~~rl~~~~~~~~~~l~~~~~~~~ 551 (800)
.+. .+++ ..++ +||||+|..... +....... ..++
T Consensus 146 ~~~------------------------~~~~--~~~~-vipngvd~~~~~~~~~~~~~~~----------------~~~~ 182 (372)
T cd03792 146 YVP------------------------PQVP--PRKV-IIPPSIDPLSGKNRELSPADIE----------------YILE 182 (372)
T ss_pred hcC------------------------CCCC--CceE-EeCCCCCCCccccCCCCHHHHH----------------HHHH
Confidence 322 1121 3455 999999976422 22221111 1124
Q ss_pred cccccCCCCCcEEEEEecCCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCc
Q 003726 552 HVGILNDRSKPLIFSMARLDGVKNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQ 631 (800)
Q Consensus 552 ~~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~ 631 (800)
.+|+ ++++++|+++||+++.||++.+++|++++.+..++++|+|+|+|+.. +.+. .+.++++.+..++.++
T Consensus 183 ~~~~--~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~----~~~~---~~~~~~~~~~~~~~~~ 253 (372)
T cd03792 183 KYGI--DPERPYITQVSRFDPWKDPFGVIDAYRKVKERVPDPQLVLVGSGATD----DPEG---WIVYEEVLEYAEGDPD 253 (372)
T ss_pred HhCC--CCCCcEEEEEeccccccCcHHHHHHHHHHHhhCCCCEEEEEeCCCCC----Cchh---HHHHHHHHHHhCCCCC
Confidence 4666 67889999999999999999999999999887789999999999651 1111 2234455556778889
Q ss_pred EEEcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHH
Q 003726 632 FRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVA 711 (800)
Q Consensus 632 V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~~GG~~EiI~dg~~G~lv~p~d~e~lA 711 (800)
|.|+|... ++.+++..+++. +|+|++||.+|+||++++||||||+|||+|+.||..++|.++.+|++++ ++++++
T Consensus 254 v~~~~~~~--~~~~~~~~~~~~-ad~~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~~~~~i~~~~~g~~~~--~~~~~a 328 (372)
T cd03792 254 IHVLTLPP--VSDLEVNALQRA-STVVLQKSIREGFGLTVTEALWKGKPVIAGPVGGIPLQIEDGETGFLVD--TVEEAA 328 (372)
T ss_pred eEEEecCC--CCHHHHHHHHHh-CeEEEeCCCccCCCHHHHHHHHcCCCEEEcCCCCchhhcccCCceEEeC--CcHHHH
Confidence 99998431 366888888886 9999999999999999999999999999999999999999999999997 467888
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003726 712 ELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLTLAGV 758 (800)
Q Consensus 712 ~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 758 (800)
++|.+++ .|++.+++|+++|++.+.++|||+.++++++++|+.
T Consensus 329 ~~i~~ll----~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 371 (372)
T cd03792 329 VRILYLL----RDPELRRKMGANAREHVRENFLITRHLKDYLYLISK 371 (372)
T ss_pred HHHHHHH----cCHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 8886665 899999999999999999999999999999999863
No 32
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=100.00 E-value=1.9e-35 Score=323.40 Aligned_cols=347 Identities=18% Similarity=0.242 Sum_probs=259.6
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCcccccceeecCCCCeEEEEeccCCCCcccccc
Q 003726 289 DTGGQVVYILDQVRALENEMLLRIQNQGLDVIPKILIVTRLIPDAKGTTCNQRLERISGTEHTHILRVPFRTENGILRKW 368 (800)
Q Consensus 289 ~tGG~~vyild~araL~~eLa~~L~~~GheV~~~i~VvTr~~p~~~g~~~~~~~e~~~g~~~v~I~rvp~~~~~~~~~~~ 368 (800)
+.||.++++. +|+++|+++||+|. |++...+.. ... ...++.++++++...+
T Consensus 8 ~~gG~e~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~------~~~----~~~~~~~~~~~~~~~~------ 59 (355)
T cd03819 8 ESGGVERGTL--------ELARALVERGHRSL----VASAGGRLV------AEL----EAEGSRHIKLPFISKN------ 59 (355)
T ss_pred ccCcHHHHHH--------HHHHHHHHcCCEEE----EEcCCCchH------HHH----HhcCCeEEEccccccc------
Confidence 4599999999 66777799999998 887542111 111 1124566666654321
Q ss_pred ccccCChhhHHHHHHHHHHHHHHHhCCCceEEEECCCCchHHHHHHHhcCCCeEEEEecCCccccCCCChhhHHhhhhhh
Q 003726 369 ISRFDVWPYLETFAEDASNEIAAELQGVPDLIIGNYSDGNLVATLLSYKLGVTQCNIAHALEKTKYPDSDLYWRKFEEKY 448 (800)
Q Consensus 369 isr~~i~~yl~~f~~~~~~~ll~~~~~~PDIIh~h~~~~~lva~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y 448 (800)
.+..+ .+.... ..+++ +.+||+||+|+....+.+.++++..++|++.+.|+......
T Consensus 60 -----~~~~~-~~~~~l-~~~~~--~~~~dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~-------------- 116 (355)
T cd03819 60 -----PLRIL-LNVARL-RRLIR--EEKVDIVHARSRAPAWSAYLAARRTRPPFVTTVHGFYSVNF-------------- 116 (355)
T ss_pred -----hhhhH-HHHHHH-HHHHH--HcCCCEEEECCCchhHHHHHHHHhcCCCEEEEeCCchhhHH--------------
Confidence 11111 111222 22233 34999999999887778888888889999999998643210
Q ss_pred ccchhhhHHHHHhccCCEEEecCHHHHhhcccCccccccccccccccceeeeccCCCCCCceEEecCCCCCCCCCCCChH
Q 003726 449 HFSSQFTADLTAMNNADFIITSTYQEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSDK 528 (800)
Q Consensus 449 ~f~~~~~~e~~a~~~AD~IIt~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~~k~~VIpnGvD~~~f~p~~~~ 528 (800)
.....+..+|.++++|....+..++ ..|++ ..++.+||||+|...|.+....
T Consensus 117 -------~~~~~~~~~~~vi~~s~~~~~~~~~-------------------~~~~~--~~k~~~i~ngi~~~~~~~~~~~ 168 (355)
T cd03819 117 -------RYNAIMARGDRVIAVSNFIADHIRE-------------------NYGVD--PDRIRVIPRGVDLDRFDPGAVP 168 (355)
T ss_pred -------HHHHHHHhcCEEEEeCHHHHHHHHH-------------------hcCCC--hhhEEEecCCccccccCccccc
Confidence 0122567899999999866552210 11232 6789999999999988664332
Q ss_pred HHHHHHhhccccccccCCccccccccccCCCCCcEEEEEecCCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCcc
Q 003726 529 EKRLIALHGQIEDLLYDPKQNDEHVGILNDRSKPLIFSMARLDGVKNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSR 608 (800)
Q Consensus 529 ~~rl~~~~~~~~~~l~~~~~~~~~~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~ 608 (800)
...... .++.++. ++++++++++||+++.||++.+++++.++.+..++++|+|+|++...
T Consensus 169 ~~~~~~--------------~~~~~~~--~~~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~~~~~~l~ivG~~~~~---- 228 (355)
T cd03819 169 PERILA--------------LAREWPL--PKGKPVILLPGRLTRWKGQEVFIEALARLKKDDPDVHLLIVGDAQGR---- 228 (355)
T ss_pred hHHHHH--------------HHHHcCC--CCCceEEEEeeccccccCHHHHHHHHHHHHhcCCCeEEEEEECCccc----
Confidence 111100 1233444 56778999999999999999999999999887789999999998651
Q ss_pred chHHHHHHHHHHHHHHHcCCCCcEEEcccccCccChHHHHHHHHccCcEEEecC-CCCCCcHHHHHHHHcCCcEEEcCcc
Q 003726 609 DREEMAEIEKMHGLIKQYNLHGQFRWISAQMNRVRNGELYRYIADTRGVFVQPA-FYEAFGLTVVEAMTCGLPTFATCHG 687 (800)
Q Consensus 609 ~~e~~~~~~~l~~li~~~gL~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS-~~E~fGl~vlEAMA~GlPVIAT~~G 687 (800)
....+.+.+.++++++.++|.|+|. .+++..+++. +|++++|| ..|+||++++|||+||+|||+|+.|
T Consensus 229 ----~~~~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~l~~-ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~ 297 (355)
T cd03819 229 ----RFYYAELLELIKRLGLQDRVTFVGH------CSDMPAAYAL-ADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHG 297 (355)
T ss_pred ----chHHHHHHHHHHHcCCcceEEEcCC------cccHHHHHHh-CCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCC
Confidence 1234556678888999899999995 3578899996 99999999 7999999999999999999999999
Q ss_pred ccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHH
Q 003726 688 GPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIY 748 (800)
Q Consensus 688 G~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~ 748 (800)
|..|++.++.+|++++++|+++++++|..++. .+++.+++++++|++.+.++|||+.+
T Consensus 298 ~~~e~i~~~~~g~~~~~~~~~~l~~~i~~~~~---~~~~~~~~~~~~a~~~~~~~f~~~~~ 355 (355)
T cd03819 298 GARETVRPGETGLLVPPGDAEALAQALDQILS---LLPEGRAKMFAKARMCVETLFSYDRM 355 (355)
T ss_pred CcHHHHhCCCceEEeCCCCHHHHHHHHHHHHh---hCHHHHHHHHHHHHHHHHHhhhhccC
Confidence 99999999999999999999999999975552 68999999999999999999999853
No 33
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=100.00 E-value=6.6e-35 Score=316.25 Aligned_cols=372 Identities=18% Similarity=0.213 Sum_probs=263.2
Q ss_pred EEEEEccCcCCCCccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCcccccceeecCC
Q 003726 269 NVVIVSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIQNQGLDVIPKILIVTRLIPDAKGTTCNQRLERISGT 348 (800)
Q Consensus 269 rI~ivs~hg~~~~~~~lg~p~tGG~~vyild~araL~~eLa~~L~~~GheV~~~i~VvTr~~p~~~g~~~~~~~e~~~g~ 348 (800)
||++|+++.+ |..||.+.++. +|++.|++.||+|+ |+|......... ....
T Consensus 1 kIl~i~~~~~---------~~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~------~~~~-- 51 (375)
T cd03821 1 KILHVIPSFD---------PKYGGPVRVVL--------NLSKALAKLGHEVT----VATTDAGGDPLL------VALN-- 51 (375)
T ss_pred CeEEEcCCCC---------cccCCeehHHH--------HHHHHHHhcCCcEE----EEecCCCCccch------hhcc--
Confidence 6899988775 35699999999 66777789999999 887653222100 0000
Q ss_pred CCeEEEEeccCCCCccccccccccCChhhHHHHHHHHHHHHHHHhCCCceEEEECCCCc--hHHHHHHHhcCCCeEEEEe
Q 003726 349 EHTHILRVPFRTENGILRKWISRFDVWPYLETFAEDASNEIAAELQGVPDLIIGNYSDG--NLVATLLSYKLGVTQCNIA 426 (800)
Q Consensus 349 ~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~ll~~~~~~PDIIh~h~~~~--~lva~lla~~~gip~v~t~ 426 (800)
+........ .. ........................+||+||+|.... ...+...++..++|++.+.
T Consensus 52 -~~~~~~~~~-~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 119 (375)
T cd03821 52 -GVPVKLFSI-NV----------AYGLNLARYLFPPSLLAWLRLNIREADIVHVHGLWSYPSLAAARAARKYGIPYVVSP 119 (375)
T ss_pred -Cceeeeccc-ch----------hhhhhhhhhccChhHHHHHHHhCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEc
Confidence 000000000 00 000000000000111112222245899999987433 4556666777899999999
Q ss_pred cCCccccCCCChhhHHhhhhhhccchhhhHHHHHhccCCEEEecCHHHHhhcccCccccccccccccccceeeeccCCCC
Q 003726 427 HALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNNADFIITSTYQEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVF 506 (800)
Q Consensus 427 H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~ 506 (800)
|+....... ....+... ...+..+...++.+|.++++|........ .+ .+
T Consensus 120 ~~~~~~~~~-~~~~~~~~------~~~~~~~~~~~~~~~~i~~~s~~~~~~~~---------------------~~--~~ 169 (375)
T cd03821 120 HGMLDPWAL-PHKALKKR------LAWFLFERRLLQAAAAVHATSEQEAAEIR---------------------RL--GL 169 (375)
T ss_pred ccccccccc-ccchhhhH------HHHHHHHHHHHhcCCEEEECCHHHHHHHH---------------------hh--CC
Confidence 986432211 00011110 11122356678899999999876544211 01 12
Q ss_pred CCceEEecCCCCCCCCCCCChHHHHHHHhhccccccccCCccccccccccCCCCCcEEEEEecCCCCCCHHHHHHHHHHh
Q 003726 507 DPKFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLYDPKQNDEHVGILNDRSKPLIFSMARLDGVKNLTGLVECYGKS 586 (800)
Q Consensus 507 ~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~l 586 (800)
..++.+||||+|.+.+.+...... ++.++. ..++++++++||+.+.||++.+++++.++
T Consensus 170 ~~~~~vi~~~~~~~~~~~~~~~~~-------------------~~~~~~--~~~~~~i~~~G~~~~~K~~~~li~a~~~l 228 (375)
T cd03821 170 KAPIAVIPNGVDIPPFAALPSRGR-------------------RRKFPI--LPDKRIILFLGRLHPKKGLDLLIEAFAKL 228 (375)
T ss_pred cccEEEcCCCcChhccCcchhhhh-------------------hhhccC--CCCCcEEEEEeCcchhcCHHHHHHHHHHh
Confidence 568999999999988876443221 122333 56788999999999999999999999999
Q ss_pred hccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEcccccCccChHHHHHHHHccCcEEEecCCCCC
Q 003726 587 SKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEA 666 (800)
Q Consensus 587 ~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~ 666 (800)
.+..++++|+++|.+.. .+...+..+++++++.++|.|+| .++.+++..+++. +|++|+||..|+
T Consensus 229 ~~~~~~~~l~i~G~~~~----------~~~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-adv~v~ps~~e~ 293 (375)
T cd03821 229 AERFPDWHLVIAGPDEG----------GYRAELKQIAAALGLEDRVTFTG----MLYGEDKAAALAD-ADLFVLPSHSEN 293 (375)
T ss_pred hhhcCCeEEEEECCCCc----------chHHHHHHHHHhcCccceEEEcC----CCChHHHHHHHhh-CCEEEeccccCC
Confidence 88888999999998765 22345566678899999999999 5666899999997 999999999999
Q ss_pred CcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHH
Q 003726 667 FGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWK 746 (800)
Q Consensus 667 fGl~vlEAMA~GlPVIAT~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~ 746 (800)
||++++|||+||+|||+|+.||..+++.+ .+|+++++ +.++++++|.+++ +|++.+++|++++++.+.++|||+
T Consensus 294 ~~~~~~Eama~G~PvI~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~i~~l~----~~~~~~~~~~~~~~~~~~~~~s~~ 367 (375)
T cd03821 294 FGIVVAEALACGTPVVTTDKVPWQELIEY-GCGWVVDD-DVDALAAALRRAL----ELPQRLKAMGENGRALVEERFSWT 367 (375)
T ss_pred CCcHHHHHHhcCCCEEEcCCCCHHHHhhc-CceEEeCC-ChHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhcCHH
Confidence 99999999999999999999999999988 78998865 5599999997766 899999999999999999999999
Q ss_pred HHHHHHH
Q 003726 747 IYSERLL 753 (800)
Q Consensus 747 ~~a~~ll 753 (800)
.++++++
T Consensus 368 ~~~~~~~ 374 (375)
T cd03821 368 AIAQQLL 374 (375)
T ss_pred HHHHHhh
Confidence 9999886
No 34
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=100.00 E-value=6.7e-34 Score=308.60 Aligned_cols=333 Identities=17% Similarity=0.162 Sum_probs=239.5
Q ss_pred eEEEEEccCcCCCCccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCcccccceeecC
Q 003726 268 FNVVIVSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIQNQGLDVIPKILIVTRLIPDAKGTTCNQRLERISG 347 (800)
Q Consensus 268 ~rI~ivs~hg~~~~~~~lg~p~tGG~~vyild~araL~~eLa~~L~~~GheV~~~i~VvTr~~p~~~g~~~~~~~e~~~g 347 (800)
|||++|++..+|- +.|..||.++++. +|++.|.++||+|+ +++...+.... .
T Consensus 1 MkI~~i~~~~~~~-----~~~~~GG~~~~~~--------~l~~~L~~~g~~V~----v~~~~~~~~~~-----~------ 52 (335)
T cd03802 1 MRIALVAPPREPV-----PPPAYGGTERVVA--------ALTEGLVARGHEVT----LFASGDSKTAA-----P------ 52 (335)
T ss_pred CeEEEEcCCcccC-----CCcccCcHHHHHH--------HHHHHHHhcCceEE----EEecCCCCccc-----c------
Confidence 7999999877652 3467899999999 66666789999999 88865322100 0
Q ss_pred CCCeEEEEeccCCCCccccccccccCChhhHHHHHHHHHHHHHHHhCCCceEEEECCCCchHHHHHHHhcCCCeEEEEec
Q 003726 348 TEHTHILRVPFRTENGILRKWISRFDVWPYLETFAEDASNEIAAELQGVPDLIIGNYSDGNLVATLLSYKLGVTQCNIAH 427 (800)
Q Consensus 348 ~~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~ll~~~~~~PDIIh~h~~~~~lva~lla~~~gip~v~t~H 427 (800)
.......+.. .............. .....+++ ..+|||||+|.+...+. +++..++|+|++.|
T Consensus 53 --~~~~~~~~~~---------~~~~~~~~~~~~~~-~~~~~~~~--~~~~Divh~~~~~~~~~---~~~~~~~~~v~~~h 115 (335)
T cd03802 53 --LVPVVPEPLR---------LDAPGRDRAEAEAL-ALAERALA--AGDFDIVHNHSLHLPLP---FARPLPVPVVTTLH 115 (335)
T ss_pred --eeeccCCCcc---------cccchhhHhhHHHH-HHHHHHHh--cCCCCEEEecCcccchh---hhcccCCCEEEEec
Confidence 0011000000 00000000011111 12223333 45899999999887655 56778899999999
Q ss_pred CCccccCCCChhhHHhhhhhhccchhhhHHHHHhccCCEEEecCHHHHhhcccCccccccccccccccceeeeccCCCCC
Q 003726 428 ALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNNADFIITSTYQEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFD 507 (800)
Q Consensus 428 ~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~ 507 (800)
+....... + ........+.++++|....+.. .. .
T Consensus 116 ~~~~~~~~-----~---------------~~~~~~~~~~~~~~s~~~~~~~------------------------~~--~ 149 (335)
T cd03802 116 GPPDPELL-----K---------------LYYAARPDVPFVSISDAQRRPW------------------------PP--L 149 (335)
T ss_pred CCCCcccc-----h---------------HHHhhCcCCeEEEecHHHHhhc------------------------cc--c
Confidence 86432210 0 0125567888999998654410 01 1
Q ss_pred CceEEecCCCCCCCCCCCChHHHHHHHhhccccccccCCccccccccccCCCCCcEEEEEecCCCCCCHHHHHHHHHHhh
Q 003726 508 PKFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLYDPKQNDEHVGILNDRSKPLIFSMARLDGVKNLTGLVECYGKSS 587 (800)
Q Consensus 508 ~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~l~ 587 (800)
.++.+||||+|.+.|.+. ..+++.++++||+.+.||++.+++++.+
T Consensus 150 ~~~~vi~ngvd~~~~~~~--------------------------------~~~~~~i~~~Gr~~~~Kg~~~li~~~~~-- 195 (335)
T cd03802 150 PWVATVHNGIDLDDYPFR--------------------------------GPKGDYLLFLGRISPEKGPHLAIRAARR-- 195 (335)
T ss_pred cccEEecCCcChhhCCCC--------------------------------CCCCCEEEEEEeeccccCHHHHHHHHHh--
Confidence 578999999999887652 2346689999999999999999999765
Q ss_pred ccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcC-CCCcEEEcccccCccChHHHHHHHHccCcEEEecCC-CC
Q 003726 588 KLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYN-LHGQFRWISAQMNRVRNGELYRYIADTRGVFVQPAF-YE 665 (800)
Q Consensus 588 ~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~g-L~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~-~E 665 (800)
.+++|+++|++.. .+.+...+.+.. +.++|.|+| .++..++..+++. +|++|+||. .|
T Consensus 196 ---~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~~v~~~G----~~~~~~~~~~~~~-~d~~v~ps~~~E 255 (335)
T cd03802 196 ---AGIPLKLAGPVSD------------PDYFYREIAPELLDGPDIEYLG----EVGGAEKAELLGN-ARALLFPILWEE 255 (335)
T ss_pred ---cCCeEEEEeCCCC------------HHHHHHHHHHhcccCCcEEEeC----CCCHHHHHHHHHh-CcEEEeCCcccC
Confidence 3689999999976 233344444443 568999999 5667899999996 999999998 59
Q ss_pred CCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCH
Q 003726 666 AFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTW 745 (800)
Q Consensus 666 ~fGl~vlEAMA~GlPVIAT~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw 745 (800)
+||++++||||||+|||+|+.||..|++.++.+|+++++ +++++++|.++. ..+ .+++++++.++|||
T Consensus 256 ~~~~~~lEAma~G~PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l~~l~----~~~------~~~~~~~~~~~~s~ 323 (335)
T cd03802 256 PFGLVMIEAMACGTPVIAFRRGAVPEVVEDGVTGFLVDS--VEELAAAVARAD----RLD------RAACRRRAERRFSA 323 (335)
T ss_pred CcchHHHHHHhcCCCEEEeCCCCchhheeCCCcEEEeCC--HHHHHHHHHHHh----ccH------HHHHHHHHHHhCCH
Confidence 999999999999999999999999999999999999986 999999997654 332 35677888899999
Q ss_pred HHHHHHHHHHHH
Q 003726 746 KIYSERLLTLAG 757 (800)
Q Consensus 746 ~~~a~~ll~ly~ 757 (800)
+.++++|+++|+
T Consensus 324 ~~~~~~~~~~y~ 335 (335)
T cd03802 324 ARMVDDYLALYR 335 (335)
T ss_pred HHHHHHHHHHhC
Confidence 999999999884
No 35
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=100.00 E-value=4.6e-34 Score=311.63 Aligned_cols=272 Identities=22% Similarity=0.296 Sum_probs=224.9
Q ss_pred CCCceEEEECCCCc-hHHHHHHHhcCCCeEEEEecCCccccCCCChhhHHhhhhhhccchhhhHHHHHhccCCEEEecCH
Q 003726 394 QGVPDLIIGNYSDG-NLVATLLSYKLGVTQCNIAHALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNNADFIITSTY 472 (800)
Q Consensus 394 ~~~PDIIh~h~~~~-~lva~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~ 472 (800)
+.+||+||+|++.. ..++.+.++..++|++++.|+...... ... ..+...++.+|.++++|.
T Consensus 77 ~~~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---------------~~~~~~~~~~~~vi~~s~ 139 (355)
T cd03799 77 RLGIDHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDIFRS--PDA---------------IDLDEKLARADFVVAISE 139 (355)
T ss_pred hcCCCEEEECCCCchHHHHHHHHHhcCCCEEEEEeccccccc--Cch---------------HHHHHHHhhCCEEEECCH
Confidence 45899999998754 455555666668999999997532111 000 123457889999999999
Q ss_pred HHHhhcccCccccccccccccccceeeeccCCCCCCceEEecCCCCCCCCCCCChHHHHHHHhhccccccccCCcccccc
Q 003726 473 QEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLYDPKQNDEH 552 (800)
Q Consensus 473 ~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~ 552 (800)
...+..+.. .|.+ ..++.++|||+|.+.+.+....
T Consensus 140 ~~~~~l~~~-------------------~~~~--~~~~~vi~~~~d~~~~~~~~~~------------------------ 174 (355)
T cd03799 140 YNRQQLIRL-------------------LGCD--PDKIHVVHCGVDLERFPPRPPP------------------------ 174 (355)
T ss_pred HHHHHHHHh-------------------cCCC--cccEEEEeCCcCHHHcCCcccc------------------------
Confidence 766532211 1222 6789999999998877654200
Q ss_pred ccccCCCCCcEEEEEecCCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcE
Q 003726 553 VGILNDRSKPLIFSMARLDGVKNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQF 632 (800)
Q Consensus 553 ~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V 632 (800)
...+++.|+++|++.+.||++.+++++.++.+..++++|+++|+++. .+.+.+.++++++.++|
T Consensus 175 ----~~~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~v 238 (355)
T cd03799 175 ----PPGEPLRILSVGRLVEKKGLDYLLEALALLKDRGIDFRLDIVGDGPL------------RDELEALIAELGLEDRV 238 (355)
T ss_pred ----ccCCCeEEEEEeeeccccCHHHHHHHHHHHhhcCCCeEEEEEECCcc------------HHHHHHHHHHcCCCCeE
Confidence 13466789999999999999999999999987778999999999977 56788889999999999
Q ss_pred EEcccccCccChHHHHHHHHccCcEEEecCCC------CCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCC
Q 003726 633 RWISAQMNRVRNGELYRYIADTRGVFVQPAFY------EAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYH 706 (800)
Q Consensus 633 ~flG~~~~~v~~~el~~~ia~aadvfV~PS~~------E~fGl~vlEAMA~GlPVIAT~~GG~~EiI~dg~~G~lv~p~d 706 (800)
+|.| .++.+++..+++. +|++++||.. |+||++++|||+||+|||+++.|+..+++.++.+|++++++|
T Consensus 239 ~~~g----~~~~~~l~~~~~~-adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~i~~~~~g~~~~~~~ 313 (355)
T cd03799 239 TLLG----AKSQEEVRELLRA-ADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIPELVEDGETGLLVPPGD 313 (355)
T ss_pred EECC----cCChHHHHHHHHh-CCEEEecceecCCCCccCccHHHHHHHHcCCCEEecCCCCcchhhhCCCceEEeCCCC
Confidence 9999 5667899999996 9999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHH
Q 003726 707 PDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERL 752 (800)
Q Consensus 707 ~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~l 752 (800)
.++++++|.+++ .|++.+.+|++++++.+.++|||+..++++
T Consensus 314 ~~~l~~~i~~~~----~~~~~~~~~~~~a~~~~~~~~s~~~~~~~l 355 (355)
T cd03799 314 PEALADAIERLL----DDPELRREMGEAGRARVEEEFDIRKQAARL 355 (355)
T ss_pred HHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhcCHHHHhhcC
Confidence 999999998776 899999999999999999999999998763
No 36
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=100.00 E-value=8.1e-34 Score=308.74 Aligned_cols=387 Identities=20% Similarity=0.249 Sum_probs=273.7
Q ss_pred EEEEEccCcCCCCccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCcccccceeecCC
Q 003726 269 NVVIVSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIQNQGLDVIPKILIVTRLIPDAKGTTCNQRLERISGT 348 (800)
Q Consensus 269 rI~ivs~hg~~~~~~~lg~p~tGG~~vyild~araL~~eLa~~L~~~GheV~~~i~VvTr~~p~~~g~~~~~~~e~~~g~ 348 (800)
||++|+++.+| ..||...++. .+++.|+++||+|+ +++............. ......
T Consensus 1 kIl~i~~~~~~---------~~~G~~~~~~--------~l~~~L~~~g~~v~----~~~~~~~~~~~~~~~~--~~~~~~ 57 (394)
T cd03794 1 KILILSQYFPP---------ELGGGAFRTT--------ELAEELVKRGHEVT----VITGSPNYPSGKIYKG--YKREEV 57 (394)
T ss_pred CEEEEecccCC---------ccCCcceeHH--------HHHHHHHhCCceEE----EEecCCCccccccccc--ceEEec
Confidence 68999987764 2388899999 66666789999999 8876533321111000 001122
Q ss_pred CCeEEEEeccCCCCccccccccccCChhhHHHHHHHHHHHHHHHhCCCceEEEECCCCc--hHHHHHHHhcCCCeEEEEe
Q 003726 349 EHTHILRVPFRTENGILRKWISRFDVWPYLETFAEDASNEIAAELQGVPDLIIGNYSDG--NLVATLLSYKLGVTQCNIA 426 (800)
Q Consensus 349 ~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~ll~~~~~~PDIIh~h~~~~--~lva~lla~~~gip~v~t~ 426 (800)
.++++.+++...... ..+..+ +..+ ..|.......+.. ...+||+||++.+.. ...+..+++..++|+++++
T Consensus 58 ~~~~~~~~~~~~~~~--~~~~~~--~~~~-~~~~~~~~~~~~~-~~~~~D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 131 (394)
T cd03794 58 DGVRVHRVPLPPYKK--NGLLKR--LLNY-LSFALSALLALLK-RRRRPDVIIATSPPLLIALAALLLARLKGAPFVLEV 131 (394)
T ss_pred CCeEEEEEecCCCCc--cchHHH--HHhh-hHHHHHHHHHHHh-cccCCCEEEEcCChHHHHHHHHHHHHhcCCCEEEEe
Confidence 367777776543221 000000 1111 1233333333321 256899999998432 4556666777799999999
Q ss_pred cCCccccCCCChhhHHhhhhhhccchhhhHHHHHhccCCEEEecCHHHHhhcccCccccccccccccccceeeeccCCCC
Q 003726 427 HALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNNADFIITSTYQEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVF 506 (800)
Q Consensus 427 H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~ 506 (800)
|+.+............. ...+. .....++..++.+|.|+++|....+... ..++ .
T Consensus 132 h~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~d~vi~~s~~~~~~~~--------------------~~~~--~ 186 (394)
T cd03794 132 RDLWPESAVALGLLKNG-SLLYR--LLRKLERLIYRRADAIVVISPGMREYLV--------------------RRGV--P 186 (394)
T ss_pred hhhcchhHHHccCcccc-chHHH--HHHHHHHHHHhcCCEEEEECHHHHHHHH--------------------hcCC--C
Confidence 98754321100000000 00000 1112456788999999999987765321 0122 2
Q ss_pred CCceEEecCCCCCCCCCCCChHHHHHHHhhccccccccCCccccccccccCCCCCcEEEEEecCCCCCCHHHHHHHHHHh
Q 003726 507 DPKFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLYDPKQNDEHVGILNDRSKPLIFSMARLDGVKNLTGLVECYGKS 586 (800)
Q Consensus 507 ~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~l 586 (800)
..++.++|||+|...+.+......+ ...+. ..+++.++++|++...||++.+++++.++
T Consensus 187 ~~~~~~i~~~~~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~G~~~~~k~~~~l~~~~~~l 245 (394)
T cd03794 187 PEKISVIPNGVDLELFKPPPADESL-------------------RKELG--LDDKFVVLYAGNIGRAQGLDTLLEAAALL 245 (394)
T ss_pred cCceEEcCCCCCHHHcCCccchhhh-------------------hhccC--CCCcEEEEEecCcccccCHHHHHHHHHHH
Confidence 6789999999998877665432211 11122 45678999999999999999999999999
Q ss_pred hccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEcccccCccChHHHHHHHHccCcEEEecCCCCC
Q 003726 587 SKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEA 666 (800)
Q Consensus 587 ~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~ 666 (800)
.+. ++++|+++|++.. .+.+.+++...++ ++|.++| .++.+++..+++. +|++++|+..|+
T Consensus 246 ~~~-~~~~l~i~G~~~~------------~~~~~~~~~~~~~-~~v~~~g----~~~~~~~~~~~~~-~di~i~~~~~~~ 306 (394)
T cd03794 246 KDR-PDIRFLIVGDGPE------------KEELKELAKALGL-DNVTFLG----RVPKEELPELLAA-ADVGLVPLKPGP 306 (394)
T ss_pred hhc-CCeEEEEeCCccc------------HHHHHHHHHHcCC-CcEEEeC----CCChHHHHHHHHh-hCeeEEeccCcc
Confidence 876 8899999999877 4566666666665 6899999 5667899999996 999999999887
Q ss_pred C-----cHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Q 003726 667 F-----GLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYE 741 (800)
Q Consensus 667 f-----Gl~vlEAMA~GlPVIAT~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~ 741 (800)
+ |++++|||+||+|||+|+.||..+++.++.+|+++++.|+++++++|.+++ .|++.+++|++++++.+.+
T Consensus 307 ~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~----~~~~~~~~~~~~~~~~~~~ 382 (394)
T cd03794 307 AFEGVSPSKLFEYMAAGKPVLASVDGESAELVEEAGAGLVVPPGDPEALAAAILELL----DDPEERAEMGENGRRYVEE 382 (394)
T ss_pred cccccCchHHHHHHHCCCcEEEecCCCchhhhccCCcceEeCCCCHHHHHHHHHHHH----hChHHHHHHHHHHHHHHHH
Confidence 5 888999999999999999999999999989999999999999999997776 8999999999999999999
Q ss_pred hCCHHHHHHHHH
Q 003726 742 RYTWKIYSERLL 753 (800)
Q Consensus 742 ~ysw~~~a~~ll 753 (800)
+|||+.++++++
T Consensus 383 ~~s~~~~~~~~~ 394 (394)
T cd03794 383 KFSREKLAERLL 394 (394)
T ss_pred hhcHHHHHHhcC
Confidence 999999998863
No 37
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=100.00 E-value=1.2e-33 Score=309.05 Aligned_cols=358 Identities=20% Similarity=0.250 Sum_probs=256.4
Q ss_pred EEEEEccCcCCCCccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCcccccceeecCC
Q 003726 269 NVVIVSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIQNQGLDVIPKILIVTRLIPDAKGTTCNQRLERISGT 348 (800)
Q Consensus 269 rI~ivs~hg~~~~~~~lg~p~tGG~~vyild~araL~~eLa~~L~~~GheV~~~i~VvTr~~p~~~g~~~~~~~e~~~g~ 348 (800)
||++++++. ..||.+.++. .|++.|+++||+|+ |++...... .. . ...
T Consensus 1 ~il~~~~~~-----------~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~-~~----~---~~~- 48 (360)
T cd04951 1 KILYVITGL-----------GLGGAEKQVV--------DLADQFVAKGHQVA----IISLTGESE-VK----P---PID- 48 (360)
T ss_pred CeEEEecCC-----------CCCCHHHHHH--------HHHHhcccCCceEE----EEEEeCCCC-cc----c---hhh-
Confidence 477776543 2489999999 66667799999999 877542111 00 0 000
Q ss_pred CCeEEEEeccCCCCccccccccccCChhhHHHHHHHHHHHHHHHhCCCceEEEECCCCchHHHHHHHhcC-CCeEEEEec
Q 003726 349 EHTHILRVPFRTENGILRKWISRFDVWPYLETFAEDASNEIAAELQGVPDLIIGNYSDGNLVATLLSYKL-GVTQCNIAH 427 (800)
Q Consensus 349 ~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~ll~~~~~~PDIIh~h~~~~~lva~lla~~~-gip~v~t~H 427 (800)
...+..++... ..+.++.. ......+++ +.+||+||+|....++++.+++... ++|++.+.|
T Consensus 49 -~~~~~~~~~~~------------~~~~~~~~--~~~~~~~~~--~~~pdiv~~~~~~~~~~~~l~~~~~~~~~~v~~~h 111 (360)
T cd04951 49 -ATIILNLNMSK------------NPLSFLLA--LWKLRKILR--QFKPDVVHAHMFHANIFARLLRLFLPSPPLICTAH 111 (360)
T ss_pred -ccceEEecccc------------cchhhHHH--HHHHHHHHH--hcCCCEEEEcccchHHHHHHHHhhCCCCcEEEEee
Confidence 11111222211 01111111 112233333 3499999999988777766665543 578999999
Q ss_pred CCccccCCCChhhHHhhhhhhccchhhhHHHHHhccCCEEEecCHHHHhhcccCccccccccccccccceeeeccCCCCC
Q 003726 428 ALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNNADFIITSTYQEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFD 507 (800)
Q Consensus 428 ~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~ 507 (800)
+..... .... .........++.++++|....+...+ ..+++ .
T Consensus 112 ~~~~~~------~~~~-----------~~~~~~~~~~~~~~~~s~~~~~~~~~-------------------~~~~~--~ 153 (360)
T cd04951 112 SKNEGG------RLRM-----------LAYRLTDFLSDLTTNVSKEALDYFIA-------------------SKAFN--A 153 (360)
T ss_pred ccCchh------HHHH-----------HHHHHHhhccCceEEEcHHHHHHHHh-------------------ccCCC--c
Confidence 863211 0000 01122344577778878755442110 01122 5
Q ss_pred CceEEecCCCCCCCCCCCChHHHHHHHhhccccccccCCccccccccccCCCCCcEEEEEecCCCCCCHHHHHHHHHHhh
Q 003726 508 PKFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLYDPKQNDEHVGILNDRSKPLIFSMARLDGVKNLTGLVECYGKSS 587 (800)
Q Consensus 508 ~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~l~ 587 (800)
.++.+||||+|...|.+........ ++.+++ ++++++++++||+.+.||++.+++++.++.
T Consensus 154 ~~~~~i~ng~~~~~~~~~~~~~~~~-----------------~~~~~~--~~~~~~~l~~g~~~~~kg~~~li~a~~~l~ 214 (360)
T cd04951 154 NKSFVVYNGIDTDRFRKDPARRLKI-----------------RNALGV--KNDTFVILAVGRLVEAKDYPNLLKAFAKLL 214 (360)
T ss_pred ccEEEEccccchhhcCcchHHHHHH-----------------HHHcCc--CCCCEEEEEEeeCchhcCcHHHHHHHHHHH
Confidence 7899999999998876654332221 244555 567889999999999999999999999998
Q ss_pred ccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEcccccCccChHHHHHHHHccCcEEEecCCCCCC
Q 003726 588 KLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAF 667 (800)
Q Consensus 588 ~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~f 667 (800)
+..++++|+|+|+|+. .+.+.+.++++++.++|.|+|.+ +++..+++. +|++++||..|+|
T Consensus 215 ~~~~~~~l~i~G~g~~------------~~~~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-ad~~v~~s~~e~~ 275 (360)
T cd04951 215 SDYLDIKLLIAGDGPL------------RATLERLIKALGLSNRVKLLGLR------DDIAAYYNA-ADLFVLSSAWEGF 275 (360)
T ss_pred hhCCCeEEEEEcCCCc------------HHHHHHHHHhcCCCCcEEEeccc------ccHHHHHHh-hceEEecccccCC
Confidence 8778999999999987 56778888889998999999943 467888886 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHH
Q 003726 668 GLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKI 747 (800)
Q Consensus 668 Gl~vlEAMA~GlPVIAT~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~ 747 (800)
|++++|||+||+|||+++.|+..|++++ +|+.++++|+++++++|.++++ .+++.+..++++ ++.+.++|||+.
T Consensus 276 ~~~~~Ea~a~G~PvI~~~~~~~~e~i~~--~g~~~~~~~~~~~~~~i~~ll~---~~~~~~~~~~~~-~~~~~~~~s~~~ 349 (360)
T cd04951 276 GLVVAEAMACELPVVATDAGGVREVVGD--SGLIVPISDPEALANKIDEILK---MSGEERDIIGAR-RERIVKKFSINS 349 (360)
T ss_pred ChHHHHHHHcCCCEEEecCCChhhEecC--CceEeCCCCHHHHHHHHHHHHh---CCHHHHHHHHHH-HHHHHHhcCHHH
Confidence 9999999999999999999999999976 8999999999999999987763 567777777776 888899999999
Q ss_pred HHHHHHHHHH
Q 003726 748 YSERLLTLAG 757 (800)
Q Consensus 748 ~a~~ll~ly~ 757 (800)
++++++++|+
T Consensus 350 ~~~~~~~~y~ 359 (360)
T cd04951 350 IVQQWLTLYT 359 (360)
T ss_pred HHHHHHHHhh
Confidence 9999999985
No 38
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=100.00 E-value=2.6e-33 Score=300.84 Aligned_cols=373 Identities=24% Similarity=0.341 Sum_probs=273.5
Q ss_pred EEEEEccCcCCCCccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCcccccceeecCC
Q 003726 269 NVVIVSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIQNQGLDVIPKILIVTRLIPDAKGTTCNQRLERISGT 348 (800)
Q Consensus 269 rI~ivs~hg~~~~~~~lg~p~tGG~~vyild~araL~~eLa~~L~~~GheV~~~i~VvTr~~p~~~g~~~~~~~e~~~g~ 348 (800)
||+++++...+ ..||...++. .|++.|.+.||+|. +++.......... ....
T Consensus 1 kI~ii~~~~~~---------~~~G~~~~~~--------~l~~~L~~~g~~v~----i~~~~~~~~~~~~------~~~~- 52 (374)
T cd03801 1 KILLVTPEYPP---------SVGGAERHVL--------ELARALAARGHEVT----VLTPGDGGLPDEE------EVGG- 52 (374)
T ss_pred CeeEEecccCC---------ccCcHhHHHH--------HHHHHHHhcCceEE----EEecCCCCCCcee------eecC-
Confidence 68999876653 2589999999 66666788999999 8887643321110 0000
Q ss_pred CCeEEEEeccCCCCccccccccccCChhhHHHHHHHHHHHHHHHhCCCceEEEECCCCchHHHHHHHhcCCCeEEEEecC
Q 003726 349 EHTHILRVPFRTENGILRKWISRFDVWPYLETFAEDASNEIAAELQGVPDLIIGNYSDGNLVATLLSYKLGVTQCNIAHA 428 (800)
Q Consensus 349 ~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~ll~~~~~~PDIIh~h~~~~~lva~lla~~~gip~v~t~H~ 428 (800)
......... . ...+.............++. ..+||+||++.+.........++..++|++.+.|+
T Consensus 53 --~~~~~~~~~----------~-~~~~~~~~~~~~~~~~~~~~--~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~ 117 (374)
T cd03801 53 --IVVVRPPPL----------L-RVRRLLLLLLLALRLRRLLR--RERFDVVHAHDWLALLAAALAARLLGIPLVLTVHG 117 (374)
T ss_pred --cceecCCcc----------c-ccchhHHHHHHHHHHHHHhh--hcCCcEEEEechhHHHHHHHHHHhcCCcEEEEecc
Confidence 000000000 0 00000111111122223333 34899999999888666657788889999999999
Q ss_pred CccccCCCChhhHHhhhhhhccchhhhHHHHHhccCCEEEecCHHHHhhcccCccccccccccccccceeeeccCCCCCC
Q 003726 429 LEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNNADFIITSTYQEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFDP 508 (800)
Q Consensus 429 l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~~ 508 (800)
......... ... ........+...++.+|.+++.|....+...+. .+.. ..
T Consensus 118 ~~~~~~~~~----~~~----~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~-------------------~~~~--~~ 168 (374)
T cd03801 118 LEFGRPGNE----LGL----LLKLARALERRALRRADRIIAVSEATREELREL-------------------GGVP--PE 168 (374)
T ss_pred chhhccccc----hhH----HHHHHHHHHHHHHHhCCEEEEecHHHHHHHHhc-------------------CCCC--CC
Confidence 754332211 000 001111235668899999999998765522111 1111 35
Q ss_pred ceEEecCCCCCCCCCCCChHHHHHHHhhccccccccCCccccccccccCCCCCcEEEEEecCCCCCCHHHHHHHHHHhhc
Q 003726 509 KFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLYDPKQNDEHVGILNDRSKPLIFSMARLDGVKNLTGLVECYGKSSK 588 (800)
Q Consensus 509 k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~l~~ 588 (800)
++.++|||+|...+.+.. ...+ ...+. ..+++.++++|++...||++.+++++..+.+
T Consensus 169 ~~~~i~~~~~~~~~~~~~-~~~~-------------------~~~~~--~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~ 226 (374)
T cd03801 169 KITVIPNGVDTERFRPAP-RAAR-------------------RRLGI--PEDEPVILFVGRLVPRKGVDLLLEALAKLRK 226 (374)
T ss_pred cEEEecCcccccccCccc-hHHH-------------------hhcCC--cCCCeEEEEecchhhhcCHHHHHHHHHHHhh
Confidence 899999999998886643 1111 11111 4567899999999999999999999999988
Q ss_pred cCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEcccccCccChHHHHHHHHccCcEEEecCCCCCCc
Q 003726 589 LRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFG 668 (800)
Q Consensus 589 ~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fG 668 (800)
..++++|+++|++.. ...+.++++++++.++|.|.| .++.+++..+++. +|++++|+..|++|
T Consensus 227 ~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-~di~i~~~~~~~~~ 289 (374)
T cd03801 227 EYPDVRLVIVGDGPL------------REELEALAAELGLGDRVTFLG----FVPDEDLPALYAA-ADVFVLPSLYEGFG 289 (374)
T ss_pred hcCCeEEEEEeCcHH------------HHHHHHHHHHhCCCcceEEEe----ccChhhHHHHHHh-cCEEEecchhcccc
Confidence 778999999997765 667778888889999999999 5667899999997 99999999999999
Q ss_pred HHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHH
Q 003726 669 LTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIY 748 (800)
Q Consensus 669 l~vlEAMA~GlPVIAT~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~ 748 (800)
++++|||+||+|||+++.++..+++.++.+|+++++.|+++++++|.+++ .|++.+.+|++++++.+.+.|||+.+
T Consensus 290 ~~~~Ea~~~g~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (374)
T cd03801 290 LVLLEAMAAGLPVVASDVGGIPEVVEDGETGLLVPPGDPEALAEAILRLL----DDPELRRRLGEAARERVAERFSWDRV 365 (374)
T ss_pred chHHHHHHcCCcEEEeCCCChhHHhcCCcceEEeCCCCHHHHHHHHHHHH----cChHHHHHHHHHHHHHHHHhcCHHHH
Confidence 99999999999999999999999999999999999999999999997766 89999999999999999999999999
Q ss_pred HHHHHHHH
Q 003726 749 SERLLTLA 756 (800)
Q Consensus 749 a~~ll~ly 756 (800)
++++.++|
T Consensus 366 ~~~~~~~~ 373 (374)
T cd03801 366 AARTEEVY 373 (374)
T ss_pred HHHHHHhh
Confidence 99999876
No 39
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=1.4e-33 Score=307.97 Aligned_cols=354 Identities=21% Similarity=0.266 Sum_probs=256.8
Q ss_pred EEEEEccCcCCCCccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCcccccceeecCC
Q 003726 269 NVVIVSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIQNQGLDVIPKILIVTRLIPDAKGTTCNQRLERISGT 348 (800)
Q Consensus 269 rI~ivs~hg~~~~~~~lg~p~tGG~~vyild~araL~~eLa~~L~~~GheV~~~i~VvTr~~p~~~g~~~~~~~e~~~g~ 348 (800)
||+++++..+| +.||.+.++. +|++.|.++||+|+ |++........ ... .
T Consensus 1 kil~i~~~~~p---------~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~------~~~---~ 50 (357)
T cd03795 1 RVLHVGKFYPP---------DRGGIEQVIR--------DLAEGLAARGIEVA----VLCASPEPKGR------DEE---R 50 (357)
T ss_pred CeeEecCCCCC---------CCCcHHHHHH--------HHHHHHHhCCCceE----EEecCCCCcch------hhh---c
Confidence 68999976663 4699999999 67777799999999 88765332211 111 1
Q ss_pred CCeEEEEeccCCCCccccccccccCChhhHHHHHHHHHHHHHHHhCCCceEEEECCCCchHHHHHHHhcCCCeEEEEecC
Q 003726 349 EHTHILRVPFRTENGILRKWISRFDVWPYLETFAEDASNEIAAELQGVPDLIIGNYSDGNLVATLLSYKLGVTQCNIAHA 428 (800)
Q Consensus 349 ~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~ll~~~~~~PDIIh~h~~~~~lva~lla~~~gip~v~t~H~ 428 (800)
.+..+.+++.... ....+....+ ...+. ....+||+||+|++.............++|.+.+.|+
T Consensus 51 ~~~~~~~~~~~~~----------~~~~~~~~~~----~~~~~-~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~ 115 (357)
T cd03795 51 NGHRVIRAPSLLN----------VASTPFSPSF----FKQLK-KLAKKADVIHLHFPNPLADLALLLLPRKKPVVVHWHS 115 (357)
T ss_pred cCceEEEeecccc----------cccccccHHH----HHHHH-hcCCCCCEEEEecCcchHHHHHHHhccCceEEEEEcC
Confidence 2345555543211 0011110011 11111 2255999999998765433333333468899999996
Q ss_pred CccccCCCChhhHHhhhhhhccchhhhHHHHHhccCCEEEecCHHHHhhcccCccccccccccccccceeeeccCCCCCC
Q 003726 429 LEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNNADFIITSTYQEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFDP 508 (800)
Q Consensus 429 l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~~ 508 (800)
..... .. ....+. ..+...++.||.|+++|....+.... +..+..
T Consensus 116 ~~~~~----~~----~~~~~~-----~~~~~~~~~~d~vi~~s~~~~~~~~~----------------------~~~~~~ 160 (357)
T cd03795 116 DIVKQ----KL----LLKLYR-----PLQRRFLRRADAIVATSPNYAETSPV----------------------LRRFRD 160 (357)
T ss_pred hhhcc----ch----hhhhhh-----HHHHHHHHhcCEEEeCcHHHHHHHHH----------------------hcCCcc
Confidence 32111 00 001111 12455789999999999865442110 111136
Q ss_pred ceEEecCCCCCCCCCCCChHHHHHHHhhccccccccCCccccccccccCCCCCcEEEEEecCCCCCCHHHHHHHHHHhhc
Q 003726 509 KFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLYDPKQNDEHVGILNDRSKPLIFSMARLDGVKNLTGLVECYGKSSK 588 (800)
Q Consensus 509 k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~l~~ 588 (800)
++.+||||+|...+.+...... ..... ..++++|+++||+.+.||++.+++++.++.
T Consensus 161 ~~~~i~~gi~~~~~~~~~~~~~--------------------~~~~~--~~~~~~i~~~G~~~~~K~~~~li~a~~~l~- 217 (357)
T cd03795 161 KVRVIPLGLDPARYPRPDALEE--------------------AIWRR--AAGRPFFLFVGRLVYYKGLDVLLEAAAALP- 217 (357)
T ss_pred ceEEecCCCChhhcCCcchhhh--------------------HhhcC--CCCCcEEEEecccccccCHHHHHHHHHhcc-
Confidence 7999999999988766432211 00111 456789999999999999999999999885
Q ss_pred cCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEcccccCccChHHHHHHHHccCcEEEecCC--CCC
Q 003726 589 LRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISAQMNRVRNGELYRYIADTRGVFVQPAF--YEA 666 (800)
Q Consensus 589 ~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~--~E~ 666 (800)
+++|+|+|+|+. ...+.+++++.++.++|.|+| .++..++..+++. ||++++||. .|+
T Consensus 218 ---~~~l~i~G~g~~------------~~~~~~~~~~~~~~~~V~~~g----~v~~~~~~~~~~~-ad~~i~ps~~~~e~ 277 (357)
T cd03795 218 ---DAPLVIVGEGPL------------EAELEALAAALGLLDRVRFLG----RLDDEEKAALLAA-CDVFVFPSVERSEA 277 (357)
T ss_pred ---CcEEEEEeCChh------------HHHHHHHHHhcCCcceEEEcC----CCCHHHHHHHHHh-CCEEEeCCcccccc
Confidence 799999999876 567788888899999999999 5667899999986 999999996 599
Q ss_pred CcHHHHHHHHcCCcEEEcCcccccccccc-CceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCH
Q 003726 667 FGLTVVEAMTCGLPTFATCHGGPAEIIEH-GVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTW 745 (800)
Q Consensus 667 fGl~vlEAMA~GlPVIAT~~GG~~EiI~d-g~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw 745 (800)
||++++|||+||+|||+|+.|+..+.+.+ +.+|++++++|+++++++|.+++ +|++.+++|++++++.+.++|||
T Consensus 278 ~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~~l~----~~~~~~~~~~~~~~~~~~~~~s~ 353 (357)
T cd03795 278 FGIVLLEAMAFGKPVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAIRRLL----EDPELRERLGEAARERAEEEFTA 353 (357)
T ss_pred cchHHHHHHHcCCCEEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHHHHHH----HCHHHHHHHHHHHHHHHHHhcch
Confidence 99999999999999999999999998886 99999999999999999997776 89999999999999999999999
Q ss_pred HHHH
Q 003726 746 KIYS 749 (800)
Q Consensus 746 ~~~a 749 (800)
+.++
T Consensus 354 ~~~~ 357 (357)
T cd03795 354 DRMV 357 (357)
T ss_pred HhhC
Confidence 9764
No 40
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=1.6e-33 Score=306.17 Aligned_cols=362 Identities=20% Similarity=0.264 Sum_probs=260.5
Q ss_pred EEEEEccCcCCCCccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCcccccceeecCC
Q 003726 269 NVVIVSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIQNQGLDVIPKILIVTRLIPDAKGTTCNQRLERISGT 348 (800)
Q Consensus 269 rI~ivs~hg~~~~~~~lg~p~tGG~~vyild~araL~~eLa~~L~~~GheV~~~i~VvTr~~p~~~g~~~~~~~e~~~g~ 348 (800)
||++|++...| ..||.+.++. .|+++|+++||+|+ ++|......... . .
T Consensus 1 kIl~i~~~~~p---------~~~G~~~~~~--------~l~~~L~~~g~~v~----~~~~~~~~~~~~--~---~----- 49 (364)
T cd03814 1 RIAIVTDTFLP---------QVNGVVRTLQ--------RLVEHLRARGHEVL----VIAPGPFRESEG--P---A----- 49 (364)
T ss_pred CeEEEecccCc---------cccceehHHH--------HHHHHHHHCCCEEE----EEeCCchhhccC--C---C-----
Confidence 68999976653 4589999999 67777899999999 888764321100 0 0
Q ss_pred CCeEEEEeccCCCCccccccccccCChhhHHHHHHHHHHHHHHHhCCCceEEEECCCCc-hHHHHHHHhcCCCeEEEEec
Q 003726 349 EHTHILRVPFRTENGILRKWISRFDVWPYLETFAEDASNEIAAELQGVPDLIIGNYSDG-NLVATLLSYKLGVTQCNIAH 427 (800)
Q Consensus 349 ~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~ll~~~~~~PDIIh~h~~~~-~lva~lla~~~gip~v~t~H 427 (800)
....+...+......+ +..... ... ....++ ..+||+||++.... +..+..++++.++|++.+.|
T Consensus 50 ~~~~~~~~~~~~~~~~------~~~~~~-----~~~-~~~~~~--~~~pdii~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 115 (364)
T cd03814 50 RVVPVPSVPLPGYPEI------RLALPP-----RRR-VRRLLD--AFAPDVVHIATPGPLGLAALRAARRLGIPVVTSYH 115 (364)
T ss_pred CceeecccccCcccce------Eecccc-----hhh-HHHHHH--hcCCCEEEEeccchhhHHHHHHHHHcCCCEEEEEe
Confidence 1122222222111100 000000 011 112222 34899999987654 46667778889999999999
Q ss_pred CCccccCCC-ChhhHHhhhhhhccchhhhHHHHHhccCCEEEecCHHHHhhcccCccccccccccccccceeeeccCCCC
Q 003726 428 ALEKTKYPD-SDLYWRKFEEKYHFSSQFTADLTAMNNADFIITSTYQEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVF 506 (800)
Q Consensus 428 ~l~~~~~~~-s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~ 506 (800)
+........ ........ .........+.+|.+++.|....+.. ... .
T Consensus 116 ~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~d~i~~~s~~~~~~~----------------------~~~--~ 163 (364)
T cd03814 116 TDFPEYLRYYGLGPLSWL--------AWAYLRWFHNRADRVLVPSPSLADEL----------------------RAR--G 163 (364)
T ss_pred cChHHHhhhcccchHhHh--------hHHHHHHHHHhCCEEEeCCHHHHHHH----------------------hcc--C
Confidence 853321110 00000000 01233557889999999998765410 011 1
Q ss_pred CCceEEecCCCCCCCCCCCChHHHHHHHhhccccccccCCccccccccccCCCCCcEEEEEecCCCCCCHHHHHHHHHHh
Q 003726 507 DPKFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLYDPKQNDEHVGILNDRSKPLIFSMARLDGVKNLTGLVECYGKS 586 (800)
Q Consensus 507 ~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~l 586 (800)
..++.+++||+|.+.|.|........ +.++ ..++++++++||+...||++.+++++.++
T Consensus 164 ~~~~~~~~~g~~~~~~~~~~~~~~~~------------------~~~~---~~~~~~i~~~G~~~~~k~~~~~i~~~~~l 222 (364)
T cd03814 164 FRRVRLWPRGVDTELFHPRRRDEALR------------------ARLG---PPDRPVLLYVGRLAPEKNLEALLDADLPL 222 (364)
T ss_pred CCceeecCCCccccccCcccccHHHH------------------HHhC---CCCCeEEEEEeccccccCHHHHHHHHHHh
Confidence 45789999999999887654332111 1122 34567899999999999999999999999
Q ss_pred hccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEcccccCccChHHHHHHHHccCcEEEecCCCCC
Q 003726 587 SKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEA 666 (800)
Q Consensus 587 ~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~ 666 (800)
.+. ++++|+++|+++. .+.++ +..++|.|.| .++.+++..+++. +|+++.||..|+
T Consensus 223 ~~~-~~~~l~i~G~~~~------------~~~~~------~~~~~v~~~g----~~~~~~~~~~~~~-~d~~l~~s~~e~ 278 (364)
T cd03814 223 RRR-PPVRLVIVGDGPA------------RARLE------ARYPNVHFLG----FLDGEELAAAYAS-ADVFVFPSRTET 278 (364)
T ss_pred hhc-CCceEEEEeCCch------------HHHHh------ccCCcEEEEe----ccCHHHHHHHHHh-CCEEEECccccc
Confidence 877 8899999999876 22222 4568999999 5667899999996 999999999999
Q ss_pred CcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHH
Q 003726 667 FGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWK 746 (800)
Q Consensus 667 fGl~vlEAMA~GlPVIAT~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~ 746 (800)
||++++|||+||+|||+++.|+..|+++++.+|+++++.|.++++++|.+++ .|++.+++|++++++.+ ++|||+
T Consensus 279 ~~~~~lEa~a~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~-~~~~~~ 353 (364)
T cd03814 279 FGLVVLEAMASGLPVVAPDAGGPADIVTDGENGLLVEPGDAEAFAAALAALL----ADPELRRRMAARARAEA-ERRSWE 353 (364)
T ss_pred CCcHHHHHHHcCCCEEEcCCCCchhhhcCCcceEEcCCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHHH-hhcCHH
Confidence 9999999999999999999999999999999999999999999999997776 89999999999999998 889999
Q ss_pred HHHHHHHHHHH
Q 003726 747 IYSERLLTLAG 757 (800)
Q Consensus 747 ~~a~~ll~ly~ 757 (800)
.++++++++|+
T Consensus 354 ~~~~~~~~~~~ 364 (364)
T cd03814 354 AFLDNLLEAYR 364 (364)
T ss_pred HHHHHHHHhhC
Confidence 99999999873
No 41
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=100.00 E-value=1.3e-33 Score=304.97 Aligned_cols=363 Identities=18% Similarity=0.190 Sum_probs=266.4
Q ss_pred EEEEEccCcCCCCccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCcccccceeecCC
Q 003726 269 NVVIVSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIQNQGLDVIPKILIVTRLIPDAKGTTCNQRLERISGT 348 (800)
Q Consensus 269 rI~ivs~hg~~~~~~~lg~p~tGG~~vyild~araL~~eLa~~L~~~GheV~~~i~VvTr~~p~~~g~~~~~~~e~~~g~ 348 (800)
||+++.+... +||.+.++. .|++.|++.|++|. +++...... ...... .
T Consensus 1 ~i~~i~~~~~-----------~gG~~~~~~--------~l~~~l~~~~~~v~----~~~~~~~~~----~~~~~~----~ 49 (365)
T cd03807 1 KVLHVITGLD-----------VGGAERMLV--------RLLKGLDRDRFEHV----VISLTDRGE----LGEELE----E 49 (365)
T ss_pred CeEEEEeecc-----------CccHHHHHH--------HHHHHhhhccceEE----EEecCcchh----hhHHHH----h
Confidence 5777775443 389999999 66667788999998 777542211 111111 1
Q ss_pred CCeEEEEeccCCCCccccccccccCChhhHHHHHHHHHHHHHHHhCCCceEEEECCCCchHHHHHHHhc-CCCeEEEEec
Q 003726 349 EHTHILRVPFRTENGILRKWISRFDVWPYLETFAEDASNEIAAELQGVPDLIIGNYSDGNLVATLLSYK-LGVTQCNIAH 427 (800)
Q Consensus 349 ~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~ll~~~~~~PDIIh~h~~~~~lva~lla~~-~gip~v~t~H 427 (800)
.++.+..++.... ...+ .+...+. .+++ +.+||+||++.......+.+.+.. .+++++.+.|
T Consensus 50 ~~i~v~~~~~~~~----------~~~~----~~~~~~~-~~~~--~~~~div~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 112 (365)
T cd03807 50 AGVPVYCLGKRPG----------RPDP----GALLRLY-KLIR--RLRPDVVHTWMYHADLYGGLAARLAGVPPVIWGIR 112 (365)
T ss_pred cCCeEEEEecccc----------cccH----HHHHHHH-HHHH--hhCCCEEEeccccccHHHHHHHHhcCCCcEEEEec
Confidence 2566666654321 0111 1111222 2222 348999999987776666666665 6789999999
Q ss_pred CCccccCCCChhhHHhhhhhhccchhhhHHHHHhccCCEEEecCHHHHhhcccCccccccccccccccceeeeccCCCCC
Q 003726 428 ALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNNADFIITSTYQEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFD 507 (800)
Q Consensus 428 ~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~ 507 (800)
....... .+.. ..+ ...+....+.+|.+++.|....+.... .|++ .
T Consensus 113 ~~~~~~~-----~~~~--~~~-----~~~~~~~~~~~~~~i~~s~~~~~~~~~--------------------~~~~--~ 158 (365)
T cd03807 113 HSDLDLG-----KKST--RLV-----ARLRRLLSSFIPLIVANSAAAAEYHQA--------------------IGYP--P 158 (365)
T ss_pred CCccccc-----chhH--hHH-----HHHHHHhccccCeEEeccHHHHHHHHH--------------------cCCC--h
Confidence 8654321 0110 001 112345677899999999866542110 1232 5
Q ss_pred CceEEecCCCCCCCCCCCChHHHHHHHhhccccccccCCccccccccccCCCCCcEEEEEecCCCCCCHHHHHHHHHHhh
Q 003726 508 PKFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLYDPKQNDEHVGILNDRSKPLIFSMARLDGVKNLTGLVECYGKSS 587 (800)
Q Consensus 508 ~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~l~ 587 (800)
.++.++|||+|...+.+........ ++.+|+ ++++++++++||+.+.||++.+++++.++.
T Consensus 159 ~~~~vi~~~~~~~~~~~~~~~~~~~-----------------~~~~~~--~~~~~~i~~~G~~~~~K~~~~li~a~~~l~ 219 (365)
T cd03807 159 KKIVVIPNGVDTERFSPDLDARARL-----------------REELGL--PEDTFLIGIVARLHPQKDHATLLRAAALLL 219 (365)
T ss_pred hheeEeCCCcCHHhcCCcccchHHH-----------------HHhcCC--CCCCeEEEEecccchhcCHHHHHHHHHHHH
Confidence 6899999999998876654332221 134565 567889999999999999999999999998
Q ss_pred ccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHH-HcCCCCcEEEcccccCccChHHHHHHHHccCcEEEecCCCCC
Q 003726 588 KLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIK-QYNLHGQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEA 666 (800)
Q Consensus 588 ~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~-~~gL~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~ 666 (800)
+..++++|+++|.+.. ......... ++++.++|.|.|.+ +++..+++. +|++++||..|+
T Consensus 220 ~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-adi~v~ps~~e~ 280 (365)
T cd03807 220 KKFPNARLLLVGDGPD------------RANLELLALKELGLEDKVILLGER------SDVPALLNA-LDVFVLSSLSEG 280 (365)
T ss_pred HhCCCeEEEEecCCcc------------hhHHHHHHHHhcCCCceEEEcccc------ccHHHHHHh-CCEEEeCCcccc
Confidence 8788999999999876 234444454 78888999999832 467888886 999999999999
Q ss_pred CcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHH
Q 003726 667 FGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWK 746 (800)
Q Consensus 667 fGl~vlEAMA~GlPVIAT~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~ 746 (800)
||++++|||+||+|||+++.||..|++.+ +|+++++.|+++++++|.+++ +|++.+.++++++++.+.++|||+
T Consensus 281 ~~~~~~Ea~a~g~PvI~~~~~~~~e~~~~--~g~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~~~~~s~~ 354 (365)
T cd03807 281 FPNVLLEAMACGLPVVATDVGDNAELVGD--TGFLVPPGDPEALAEAIEALL----ADPALRQALGEAARERIEENFSIE 354 (365)
T ss_pred CCcHHHHHHhcCCCEEEcCCCChHHHhhc--CCEEeCCCCHHHHHHHHHHHH----hChHHHHHHHHHHHHHHHHhCCHH
Confidence 99999999999999999999999999977 899999999999999997776 889999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 003726 747 IYSERLLTLAG 757 (800)
Q Consensus 747 ~~a~~ll~ly~ 757 (800)
..++++.++|+
T Consensus 355 ~~~~~~~~~y~ 365 (365)
T cd03807 355 AMVEAYEELYR 365 (365)
T ss_pred HHHHHHHHHhC
Confidence 99999999873
No 42
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=1.3e-34 Score=333.61 Aligned_cols=294 Identities=19% Similarity=0.253 Sum_probs=233.1
Q ss_pred CCceEEEECCCC-chHHHHHHHhcCCCeEEEEecCCccccCC--CChhhHH-hhhhhhccchhhhHHHHHhccCCEEEec
Q 003726 395 GVPDLIIGNYSD-GNLVATLLSYKLGVTQCNIAHALEKTKYP--DSDLYWR-KFEEKYHFSSQFTADLTAMNNADFIITS 470 (800)
Q Consensus 395 ~~PDIIh~h~~~-~~lva~lla~~~gip~v~t~H~l~~~~~~--~s~~~~~-~~~~~y~f~~~~~~e~~a~~~AD~IIt~ 470 (800)
.++||||+|... .++++.++++..|+|+++|.|+....... .....|. ..............++.+++.||.|+++
T Consensus 172 ~~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ad~Ii~~ 251 (475)
T cd03813 172 PKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQADWEMSYFRRLWIRFFESLGRLAYQAADRITTL 251 (475)
T ss_pred CCCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHhCCEEEec
Confidence 578999999754 46788888999999999999986321100 0000000 0000000001112456789999999999
Q ss_pred CHHHHhhcccCccccccccccccccceeeeccCCCCCCceEEecCCCCCCCCCCCChHHHHHHHhhccccccccCCcccc
Q 003726 471 TYQEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLYDPKQND 550 (800)
Q Consensus 471 S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~ 550 (800)
|....+.. ...|++ ..|+.|||||+|.+.|.+....
T Consensus 252 s~~~~~~~--------------------~~~g~~--~~ki~vIpNgid~~~f~~~~~~---------------------- 287 (475)
T cd03813 252 YEGNRERQ--------------------IEDGAD--PEKIRVIPNGIDPERFAPARRA---------------------- 287 (475)
T ss_pred CHHHHHHH--------------------HHcCCC--HHHeEEeCCCcCHHHcCCcccc----------------------
Confidence 98654311 012333 6799999999999988764321
Q ss_pred ccccccCCCCCcEEEEEecCCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCC
Q 003726 551 EHVGILNDRSKPLIFSMARLDGVKNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHG 630 (800)
Q Consensus 551 ~~~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~ 630 (800)
+ ..+++++|+++||+.+.||++.+++|+..+.+..++++|+|+|+++. ..++.++++++++++++.+
T Consensus 288 ---~--~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~p~~~l~IvG~g~~--------~~~~~~e~~~li~~l~l~~ 354 (475)
T cd03813 288 ---R--PEKEPPVVGLIGRVVPIKDIKTFIRAAAIVRKKIPDAEGWVIGPTDE--------DPEYAEECRELVESLGLED 354 (475)
T ss_pred ---c--cCCCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEECCCCc--------ChHHHHHHHHHHHHhCCCC
Confidence 0 14567899999999999999999999999988889999999999853 1245678889999999999
Q ss_pred cEEEcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcCcccccccccc------CceEEEECC
Q 003726 631 QFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH------GVSGFHIDP 704 (800)
Q Consensus 631 ~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~~GG~~EiI~d------g~~G~lv~p 704 (800)
+|+|+| ..++..+++. +|++|+||..|+||++++||||||+|||+|+.||..|++.+ |.+|++++|
T Consensus 355 ~V~f~G-------~~~v~~~l~~-aDv~vlpS~~Eg~p~~vlEAma~G~PVVatd~g~~~elv~~~~~~~~g~~G~lv~~ 426 (475)
T cd03813 355 NVKFTG-------FQNVKEYLPK-LDVLVLTSISEGQPLVILEAMAAGIPVVATDVGSCRELIEGADDEALGPAGEVVPP 426 (475)
T ss_pred eEEEcC-------CccHHHHHHh-CCEEEeCchhhcCChHHHHHHHcCCCEEECCCCChHHHhcCCcccccCCceEEECC
Confidence 999999 1467778885 99999999999999999999999999999999999999988 679999999
Q ss_pred CCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003726 705 YHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLTLAG 757 (800)
Q Consensus 705 ~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 757 (800)
.|+++++++|.+++ .|++.+++|+++|++++.+.|+|+.++++|.++|+
T Consensus 427 ~d~~~la~ai~~ll----~~~~~~~~~~~~a~~~v~~~~s~~~~~~~y~~lY~ 475 (475)
T cd03813 427 ADPEALARAILRLL----KDPELRRAMGEAGRKRVERYYTLERMIDSYRRLYL 475 (475)
T ss_pred CCHHHHHHHHHHHh----cCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 99999999997766 89999999999999999999999999999999984
No 43
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=100.00 E-value=4.9e-33 Score=303.04 Aligned_cols=358 Identities=18% Similarity=0.205 Sum_probs=251.6
Q ss_pred EEEEEccCcCCCCccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCcccccceeecCC
Q 003726 269 NVVIVSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIQNQGLDVIPKILIVTRLIPDAKGTTCNQRLERISGT 348 (800)
Q Consensus 269 rI~ivs~hg~~~~~~~lg~p~tGG~~vyild~araL~~eLa~~L~~~GheV~~~i~VvTr~~p~~~g~~~~~~~e~~~g~ 348 (800)
||++|++.. |..||.+.++. .|+++|.+.||+|+ +++............ ..
T Consensus 1 kI~~v~~~~----------~~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~~~~-------~~ 51 (366)
T cd03822 1 RIALVSPYP----------PRKCGIATFTT--------DLVNALSARGPDVL----VVSVAALYPSLLYGG-------EQ 51 (366)
T ss_pred CeEEecCCC----------CCCCcHHHHHH--------HHHHHhhhcCCeEE----EEEeecccCcccCCC-------cc
Confidence 689998643 34699999999 66667799999998 776543221100000 00
Q ss_pred CCeEEEEeccCCCCccccccccccCChhhHHHHHHHHHHHHHHHhCCCceEEEECCCCc---hHHH---HHHHhcCCCeE
Q 003726 349 EHTHILRVPFRTENGILRKWISRFDVWPYLETFAEDASNEIAAELQGVPDLIIGNYSDG---NLVA---TLLSYKLGVTQ 422 (800)
Q Consensus 349 ~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~ll~~~~~~PDIIh~h~~~~---~lva---~lla~~~gip~ 422 (800)
....... . .....+ ......++ ..+||+||++.+.+ .... ....+..++|+
T Consensus 52 ~~~~~~~-~--------------~~~~~~------~~~~~~~~--~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (366)
T cd03822 52 EVVRVIV-L--------------DNPLDY------RRAARAIR--LSGPDVVVIQHEYGIFGGEAGLYLLLLLRGLGIPV 108 (366)
T ss_pred cceeeee-c--------------CCchhH------HHHHHHHh--hcCCCEEEEeeccccccchhhHHHHHHHhhcCCCE
Confidence 0000000 0 000111 11222233 34899999987432 1222 22234578999
Q ss_pred EEEecCCccccCCCChhhHHhhhhhhccchhhhHHHHHhccCCEEEecCHHHHhhcccCccccccccccccccceeeecc
Q 003726 423 CNIAHALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNNADFIITSTYQEIAGSKNNVGQYENHTAFTLPGLYRVVHG 502 (800)
Q Consensus 423 v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~G 502 (800)
+.+.|+..... . ..+ ........++.+|.|+++|...... ..
T Consensus 109 i~~~h~~~~~~-~---~~~-----------~~~~~~~~~~~~d~ii~~s~~~~~~---~~-------------------- 150 (366)
T cd03822 109 VVTLHTVLLHE-P---RPG-----------DRALLRLLLRRADAVIVMSSELLRA---LL-------------------- 150 (366)
T ss_pred EEEEecCCccc-c---chh-----------hhHHHHHHHhcCCEEEEeeHHHHHH---HH--------------------
Confidence 99999961110 0 000 0112345788999999997433221 00
Q ss_pred CCCCCCceEEecCCCCCCCCCCCChHHHHHHHhhccccccccCCccccccccccCCCCCcEEEEEecCCCCCCHHHHHHH
Q 003726 503 IDVFDPKFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLYDPKQNDEHVGILNDRSKPLIFSMARLDGVKNLTGLVEC 582 (800)
Q Consensus 503 i~v~~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA 582 (800)
...+..++.+||||+|...+.+..... ..+. ..++++++++||+.+.||++.+++|
T Consensus 151 ~~~~~~~~~~i~~~~~~~~~~~~~~~~----------------------~~~~--~~~~~~i~~~G~~~~~K~~~~ll~a 206 (366)
T cd03822 151 LRAYPEKIAVIPHGVPDPPAEPPESLK----------------------ALGG--LDGRPVLLTFGLLRPYKGLELLLEA 206 (366)
T ss_pred hhcCCCcEEEeCCCCcCcccCCchhhH----------------------hhcC--CCCCeEEEEEeeccCCCCHHHHHHH
Confidence 011146899999999988776542211 1111 4567899999999999999999999
Q ss_pred HHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEcccccCccChHHHHHHHHccCcEEEecC
Q 003726 583 YGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISAQMNRVRNGELYRYIADTRGVFVQPA 662 (800)
Q Consensus 583 ~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS 662 (800)
+.++.+..++++|+|+|++.... ........++++++++.++|.|+|. .++.+++..+++. +|++++||
T Consensus 207 ~~~~~~~~~~~~l~i~G~~~~~~-------~~~~~~~~~~i~~~~~~~~v~~~~~---~~~~~~~~~~~~~-ad~~v~ps 275 (366)
T cd03822 207 LPLLVAKHPDVRLLVAGETHPDL-------ERYRGEAYALAERLGLADRVIFINR---YLPDEELPELFSA-ADVVVLPY 275 (366)
T ss_pred HHHHHhhCCCeEEEEeccCccch-------hhhhhhhHhHHHhcCCCCcEEEecC---cCCHHHHHHHHhh-cCEEEecc
Confidence 99998888899999999986510 0000111145788899999999982 3778899999997 99999999
Q ss_pred CCC--CCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 003726 663 FYE--AFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIY 740 (800)
Q Consensus 663 ~~E--~fGl~vlEAMA~GlPVIAT~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~ 740 (800)
.+| +||++++|||+||+|||+|+.|| .+.+.++.+|++++++|+++++++|..++ +|++.+.+|++++++.+.
T Consensus 276 ~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~i~~~~~g~~~~~~d~~~~~~~l~~l~----~~~~~~~~~~~~~~~~~~ 350 (366)
T cd03822 276 RSADQTQSGVLAYAIGFGKPVISTPVGH-AEEVLDGGTGLLVPPGDPAALAEAIRRLL----ADPELAQALRARAREYAR 350 (366)
T ss_pred cccccccchHHHHHHHcCCCEEecCCCC-hheeeeCCCcEEEcCCCHHHHHHHHHHHH----cChHHHHHHHHHHHHHHh
Confidence 999 99999999999999999999999 77778888999999999999999997776 899999999999999986
Q ss_pred HhCCHHHHHHHHHHHHH
Q 003726 741 ERYTWKIYSERLLTLAG 757 (800)
Q Consensus 741 ~~ysw~~~a~~ll~ly~ 757 (800)
+ |||+.+++++.++|+
T Consensus 351 ~-~s~~~~~~~~~~~~~ 366 (366)
T cd03822 351 A-MSWERVAERYLRLLA 366 (366)
T ss_pred h-CCHHHHHHHHHHHhC
Confidence 6 999999999999873
No 44
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=100.00 E-value=4.4e-33 Score=302.39 Aligned_cols=370 Identities=20% Similarity=0.296 Sum_probs=264.2
Q ss_pred EEEEEccCcCCCCccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCcccccceeecCC
Q 003726 269 NVVIVSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIQNQGLDVIPKILIVTRLIPDAKGTTCNQRLERISGT 348 (800)
Q Consensus 269 rI~ivs~hg~~~~~~~lg~p~tGG~~vyild~araL~~eLa~~L~~~GheV~~~i~VvTr~~p~~~g~~~~~~~e~~~g~ 348 (800)
||++++...+ |.+||....+. .|++.|.++||+|+ ++|...+...... ..
T Consensus 1 kil~~~~~~~---------p~~~G~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~~---------~~ 50 (374)
T cd03817 1 KIGIFTDTYL---------PQVNGVATSIR--------RLAEELEKRGHEVY----VVAPSYPGAPEEE---------EV 50 (374)
T ss_pred CeeEeehhcc---------CCCCCeehHHH--------HHHHHHHHcCCeEE----EEeCCCCCCCccc---------cc
Confidence 6889987655 45789999999 67777899999999 8887644321110 00
Q ss_pred CCeEEEEeccCCCCccccccccccCChhhHHHHHHHHHHHHHHHhCCCceEEEECCCCc-hHHHHHHHhcCCCeEEEEec
Q 003726 349 EHTHILRVPFRTENGILRKWISRFDVWPYLETFAEDASNEIAAELQGVPDLIIGNYSDG-NLVATLLSYKLGVTQCNIAH 427 (800)
Q Consensus 349 ~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~ll~~~~~~PDIIh~h~~~~-~lva~lla~~~gip~v~t~H 427 (800)
.+....+.+.... ......+. +.. ....... ..+||+||++.+.. +..+..++++.++|++.+.|
T Consensus 51 ~~~~~~~~~~~~~-------~~~~~~~~----~~~-~~~~~~~--~~~~Div~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 116 (374)
T cd03817 51 VVVRPFRVPTFKY-------PDFRLPLP----IPR-ALIIILK--ELGPDIVHTHTPFSLGLLGLRVARKLGIPVVATYH 116 (374)
T ss_pred ccccccccccchh-------hhhhcccc----HHH-HHHHHHh--hcCCCEEEECCchhhhhHHHHHHHHcCCCEEEEec
Confidence 0111111111000 00000111 111 1222233 44899999988654 55677788889999999999
Q ss_pred CCccccCCCChhhHHhhhhhhccchhh-hHHHHHhccCCEEEecCHHHHhhcccCccccccccccccccceeeeccCCCC
Q 003726 428 ALEKTKYPDSDLYWRKFEEKYHFSSQF-TADLTAMNNADFIITSTYQEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVF 506 (800)
Q Consensus 428 ~l~~~~~~~s~~~~~~~~~~y~f~~~~-~~e~~a~~~AD~IIt~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~ 506 (800)
+....... .............. ..++..++.||.|++.|....+..+ + .+.
T Consensus 117 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~~~~----~----------------~~~--- 168 (374)
T cd03817 117 TMYEDYTH-----YVPLGRLLARAVVRRKLSRRFYNRCDAVIAPSEKIADLLR----E----------------YGV--- 168 (374)
T ss_pred CCHHHHHH-----HHhcccchhHHHHHHHHHHHHhhhCCEEEeccHHHHHHHH----h----------------cCC---
Confidence 86431100 00000000000011 3456788999999999986544211 0 122
Q ss_pred CCceEEecCCCCCCCCCCCChHHHHHHHhhccccccccCCccccccccccCCCCCcEEEEEecCCCCCCHHHHHHHHHHh
Q 003726 507 DPKFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLYDPKQNDEHVGILNDRSKPLIFSMARLDGVKNLTGLVECYGKS 586 (800)
Q Consensus 507 ~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~l 586 (800)
..++.++|||+|...+.+......+ +.++. +.+++.|+++|++.+.||++.+++++.++
T Consensus 169 ~~~~~vi~~~~~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~G~~~~~k~~~~l~~~~~~~ 227 (374)
T cd03817 169 KRPIEVIPTGIDLDRFEPVDGDDER-------------------RKLGI--PEDEPVLLYVGRLAKEKNIDFLIRAFARL 227 (374)
T ss_pred CCceEEcCCccchhccCccchhHHH-------------------HhcCC--CCCCeEEEEEeeeecccCHHHHHHHHHHH
Confidence 3468999999999888765433221 22343 45678899999999999999999999999
Q ss_pred hccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEcccccCccChHHHHHHHHccCcEEEecCCCCC
Q 003726 587 SKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEA 666 (800)
Q Consensus 587 ~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~ 666 (800)
.+..++++|+++|+++. .+.+.++++++++.++|.|+| .++.+++..+++. +|++++||..|+
T Consensus 228 ~~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-ad~~l~~s~~e~ 290 (374)
T cd03817 228 LKEEPDVKLVIVGDGPE------------REELEELARELGLADRVIFTG----FVPREELPDYYKA-ADLFVFASTTET 290 (374)
T ss_pred HHhCCCeEEEEEeCCch------------HHHHHHHHHHcCCCCcEEEec----cCChHHHHHHHHH-cCEEEecccccC
Confidence 87778999999999876 567888889999999999999 5667899999996 999999999999
Q ss_pred CcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHH
Q 003726 667 FGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWK 746 (800)
Q Consensus 667 fGl~vlEAMA~GlPVIAT~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~ 746 (800)
+|++++|||+||+|||+++.|+..|++.++.+|+++++.+. +++++|.+++ +|++.+++|++++++.+.+ ++
T Consensus 291 ~~~~~~Ea~~~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~-~~~~~i~~l~----~~~~~~~~~~~~~~~~~~~-~~-- 362 (374)
T cd03817 291 QGLVLLEAMAAGLPVVAVDAPGLPDLVADGENGFLFPPGDE-ALAEALLRLL----QDPELRRRLSKNAEESAEK-FS-- 362 (374)
T ss_pred cChHHHHHHHcCCcEEEeCCCChhhheecCceeEEeCCCCH-HHHHHHHHHH----hChHHHHHHHHHHHHHHHH-HH--
Confidence 99999999999999999999999999999999999998887 8888886665 8999999999999999854 44
Q ss_pred HHHHHHHHHHH
Q 003726 747 IYSERLLTLAG 757 (800)
Q Consensus 747 ~~a~~ll~ly~ 757 (800)
.++++.++|+
T Consensus 363 -~~~~~~~~~~ 372 (374)
T cd03817 363 -FAKKVEKLYE 372 (374)
T ss_pred -HHHHHHHHHh
Confidence 6667777664
No 45
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=100.00 E-value=1.6e-33 Score=308.51 Aligned_cols=347 Identities=15% Similarity=0.171 Sum_probs=249.6
Q ss_pred EEEEEccCcCCCCccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCcccccceeecCC
Q 003726 269 NVVIVSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIQNQGLDVIPKILIVTRLIPDAKGTTCNQRLERISGT 348 (800)
Q Consensus 269 rI~ivs~hg~~~~~~~lg~p~tGG~~vyild~araL~~eLa~~L~~~GheV~~~i~VvTr~~p~~~g~~~~~~~e~~~g~ 348 (800)
||+++++.. ..||.+.++. ++++.|++.||+|+ +++...... ..... ...
T Consensus 1 kIl~~~~~~-----------~~GG~~~~~~--------~l~~~L~~~~~~v~----~i~~~~~~~---~~~~~----~~~ 50 (358)
T cd03812 1 KILHIVGTM-----------NRGGIETFIM--------NYYRNLDRSKIQFD----FLVTSKEEG---DYDDE----IEK 50 (358)
T ss_pred CEEEEeCCC-----------CCccHHHHHH--------HHHHhcCccceEEE----EEEeCCCCc---chHHH----HHH
Confidence 688887643 2499999999 55556678999999 887653221 00111 111
Q ss_pred CCeEEEEeccCCCCccccccccccCChhhHHHHHHHHHHHHHHHhCCCceEEEECCCCchHHHHHHHhcCCCeE-EEEec
Q 003726 349 EHTHILRVPFRTENGILRKWISRFDVWPYLETFAEDASNEIAAELQGVPDLIIGNYSDGNLVATLLSYKLGVTQ-CNIAH 427 (800)
Q Consensus 349 ~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~ll~~~~~~PDIIh~h~~~~~lva~lla~~~gip~-v~t~H 427 (800)
.++.+++++.... ..+ .+.....+ +++ ..+||+||+|......++.++++..+.|. +.+.|
T Consensus 51 ~~~~~~~~~~~~~-----------~~~----~~~~~~~~-~~~--~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 112 (358)
T cd03812 51 LGGKIYYIPARKK-----------NPL----KYFKKLYK-LIK--KNKYDIVHVHGSSASGFILLAAKKAGVKVRIAHSH 112 (358)
T ss_pred cCCeEEEecCCCc-----------cHH----HHHHHHHH-HHh--cCCCCEEEEeCcchhHHHHHHHhhCCCCeEEEEec
Confidence 2456666553321 111 12222222 223 34999999999887677777777777765 55677
Q ss_pred CCccccCCCChhhHHhhhhhhccchhhhHHHHHhccCCEEEecCHHHHhhcccCccccccccccccccceeeeccCCCCC
Q 003726 428 ALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNNADFIITSTYQEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFD 507 (800)
Q Consensus 428 ~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~ 507 (800)
.............+. ...+...++.+|.++++|....+..... ...
T Consensus 113 ~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~i~~s~~~~~~~~~~-----------------------~~~ 158 (358)
T cd03812 113 NTSDSHDKKKKILKY-----------KVLRKLINRLATDYLACSEEAGKWLFGK-----------------------VKN 158 (358)
T ss_pred cccccccccchhhHH-----------HHHHHHHHhcCCEEEEcCHHHHHHHHhC-----------------------CCc
Confidence 653322111110000 1224557889999999998765521110 125
Q ss_pred CceEEecCCCCCCCCCCCChHHHHHHHhhccccccccCCccccccccccCCCCCcEEEEEecCCCCCCHHHHHHHHHHhh
Q 003726 508 PKFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLYDPKQNDEHVGILNDRSKPLIFSMARLDGVKNLTGLVECYGKSS 587 (800)
Q Consensus 508 ~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~l~ 587 (800)
.++.+||||+|.+.|.+....... ++..+. .+++++|+++||+.+.||++.+++++.++.
T Consensus 159 ~~~~vi~ngvd~~~~~~~~~~~~~------------------~~~~~~--~~~~~~i~~vGr~~~~Kg~~~li~a~~~l~ 218 (358)
T cd03812 159 KKFKVIPNGIDLEKFIFNEEIRKK------------------RRELGI--LEDKFVIGHVGRFSEQKNHEFLIEIFAELL 218 (358)
T ss_pred ccEEEEeccCcHHHcCCCchhhhH------------------HHHcCC--CCCCEEEEEEeccccccChHHHHHHHHHHH
Confidence 789999999999888665332211 122333 567889999999999999999999999998
Q ss_pred ccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEcccccCccChHHHHHHHHccCcEEEecCCCCCC
Q 003726 588 KLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAF 667 (800)
Q Consensus 588 ~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~f 667 (800)
+..++++++|+|+|+. .+.+++.++++++.++|.|+|. .+++..+++. ||++|+||..|+|
T Consensus 219 ~~~~~~~l~ivG~g~~------------~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~~~~-adi~v~ps~~E~~ 279 (358)
T cd03812 219 KKNPNAKLLLVGDGEL------------EEEIKKKVKELGLEDKVIFLGV------RNDVPELLQA-MDVFLFPSLYEGL 279 (358)
T ss_pred HhCCCeEEEEEeCCch------------HHHHHHHHHhcCCCCcEEEecc------cCCHHHHHHh-cCEEEecccccCC
Confidence 8889999999999977 5678888999999999999994 3568888886 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Q 003726 668 GLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYE 741 (800)
Q Consensus 668 Gl~vlEAMA~GlPVIAT~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~ 741 (800)
|++++||||||+|||+|+.||..|++.+ ..|++..+++++++|++|.+++ +||+..+++...+......
T Consensus 280 ~~~~lEAma~G~PvI~s~~~~~~~~i~~-~~~~~~~~~~~~~~a~~i~~l~----~~~~~~~~~~~~~~~~~~~ 348 (358)
T cd03812 280 PLVLIEAQASGLPCILSDTITKEVDLTD-LVKFLSLDESPEIWAEEILKLK----SEDRRERSSESIKKKGLDA 348 (358)
T ss_pred CHHHHHHHHhCCCEEEEcCCchhhhhcc-CccEEeCCCCHHHHHHHHHHHH----hCcchhhhhhhhhhccchh
Confidence 9999999999999999999999999988 5677777778999999997776 8999999888888776543
No 46
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=100.00 E-value=1.8e-33 Score=312.23 Aligned_cols=268 Identities=18% Similarity=0.253 Sum_probs=204.3
Q ss_pred CCCceEEEECCCCchHHHHHHHhcCCCe--EEEEecCCccccCCCChhhHHhhhhhhccchhhhHHHHHhccCCEEEecC
Q 003726 394 QGVPDLIIGNYSDGNLVATLLSYKLGVT--QCNIAHALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNNADFIITST 471 (800)
Q Consensus 394 ~~~PDIIh~h~~~~~lva~lla~~~gip--~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S 471 (800)
+.+||+||+|.+....++.++++..++| ++.+.|...... . . + ....+..+|.++++|
T Consensus 82 ~~~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~----~-----~---~--------~~~~~~~~d~~i~~S 141 (359)
T PRK09922 82 ETQPDIVICIDVISCLYANKARKKSGKQFKIFSWPHFSLDHK----K-----H---A--------ECKKITCADYHLAIS 141 (359)
T ss_pred hcCCCEEEEcCHHHHHHHHHHHHHhCCCCeEEEEecCccccc----c-----h---h--------hhhhhhcCCEEEEcC
Confidence 3489999999876666777777766654 444555421100 0 0 0 001236899999999
Q ss_pred HHHHhhcccCccccccccccccccceeeeccCCCCCCceEEecCCCCCCCCCCCChHHHHHHHhhccccccccCCccccc
Q 003726 472 YQEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLYDPKQNDE 551 (800)
Q Consensus 472 ~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~ 551 (800)
....+... ..|++ ..++.+||||+|.+.+.....
T Consensus 142 ~~~~~~~~--------------------~~~~~--~~ki~vi~N~id~~~~~~~~~------------------------ 175 (359)
T PRK09922 142 SGIKEQMM--------------------ARGIS--AQRISVIYNPVEIKTIIIPPP------------------------ 175 (359)
T ss_pred HHHHHHHH--------------------HcCCC--HHHEEEEcCCCCHHHccCCCc------------------------
Confidence 86554211 12333 568999999999654432110
Q ss_pred cccccCCCCCcEEEEEecCC--CCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCC
Q 003726 552 HVGILNDRSKPLIFSMARLD--GVKNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLH 629 (800)
Q Consensus 552 ~~Gll~~~~k~iIl~vGRL~--~~Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~ 629 (800)
...++++++++||+. ..||++.+++++.++. ++++|+|+|+|+. .+.++++++++++.
T Consensus 176 -----~~~~~~~i~~~Grl~~~~~k~~~~l~~a~~~~~---~~~~l~ivG~g~~------------~~~l~~~~~~~~l~ 235 (359)
T PRK09922 176 -----ERDKPAVFLYVGRLKFEGQKNVKELFDGLSQTT---GEWQLHIIGDGSD------------FEKCKAYSRELGIE 235 (359)
T ss_pred -----ccCCCcEEEEEEEEecccCcCHHHHHHHHHhhC---CCeEEEEEeCCcc------------HHHHHHHHHHcCCC
Confidence 023567899999996 4699999999999874 3799999999987 57788999999999
Q ss_pred CcEEEcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcC-ccccccccccCceEEEECCCCHH
Q 003726 630 GQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATC-HGGPAEIIEHGVSGFHIDPYHPD 708 (800)
Q Consensus 630 ~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~-~GG~~EiI~dg~~G~lv~p~d~e 708 (800)
++|.|+|++.+ +.+++..+++. +|++|+||.+|+||++++||||||+|||+|+ .||+.|+|.++.+|++++|+|++
T Consensus 236 ~~v~f~G~~~~--~~~~~~~~~~~-~d~~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g~~eiv~~~~~G~lv~~~d~~ 312 (359)
T PRK09922 236 QRIIWHGWQSQ--PWEVVQQKIKN-VSALLLTSKFEGFPMTLLEAMSYGIPCISSDCMSGPRDIIKPGLNGELYTPGNID 312 (359)
T ss_pred CeEEEecccCC--cHHHHHHHHhc-CcEEEECCcccCcChHHHHHHHcCCCEEEeCCCCChHHHccCCCceEEECCCCHH
Confidence 99999996542 34678888886 9999999999999999999999999999999 89999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003726 709 QVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLTLAG 757 (800)
Q Consensus 709 ~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 757 (800)
++|++|.+++ +|++.+ +..+......+|+-+.+.+++..+|.
T Consensus 313 ~la~~i~~l~----~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (359)
T PRK09922 313 EFVGKLNKVI----SGEVKY---QHDAIPNSIERFYEVLYFKNLNNALF 354 (359)
T ss_pred HHHHHHHHHH----hCcccC---CHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 9999998876 787654 23344444578888999999988875
No 47
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=100.00 E-value=5.1e-33 Score=304.53 Aligned_cols=342 Identities=18% Similarity=0.250 Sum_probs=245.6
Q ss_pred eEEEEEccCcCCCCccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCcccccceeecC
Q 003726 268 FNVVIVSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIQNQGLDVIPKILIVTRLIPDAKGTTCNQRLERISG 347 (800)
Q Consensus 268 ~rI~ivs~hg~~~~~~~lg~p~tGG~~vyild~araL~~eLa~~L~~~GheV~~~i~VvTr~~p~~~g~~~~~~~e~~~g 347 (800)
|||++++... ..||.+.++. .+++.|+++||+|+ |++....
T Consensus 1 MkIl~~~~~~-----------~~gG~~~~~~--------~l~~~l~~~G~~v~----v~~~~~~---------------- 41 (365)
T cd03825 1 MKVLHLNTSD-----------ISGGAARAAY--------RLHRALQAAGVDST----MLVQEKK---------------- 41 (365)
T ss_pred CeEEEEecCC-----------CCCcHHHHHH--------HHHHHHHhcCCcee----EEEeecc----------------
Confidence 7999998542 2489999999 66666799999999 7764310
Q ss_pred CCCeEEEEeccCCCCccccccccccCChhhHHHHHHHHHHHHHHHhCCCceEEEECCCCchHHHHHHHhcC--CCeEEEE
Q 003726 348 TEHTHILRVPFRTENGILRKWISRFDVWPYLETFAEDASNEIAAELQGVPDLIIGNYSDGNLVATLLSYKL--GVTQCNI 425 (800)
Q Consensus 348 ~~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~ll~~~~~~PDIIh~h~~~~~lva~lla~~~--gip~v~t 425 (800)
. .. .... ..+|||||+|++....+......+. ++|+|++
T Consensus 42 ---------~---------------------------~~-~~~~--~~~~diih~~~~~~~~~~~~~~~~~~~~~~~v~~ 82 (365)
T cd03825 42 ---------A---------------------------LI-SKIE--IINADIVHLHWIHGGFLSIEDLSKLLDRKPVVWT 82 (365)
T ss_pred ---------h---------------------------hh-hChh--cccCCEEEEEccccCccCHHHHHHHHcCCCEEEE
Confidence 0 00 0111 3389999999866644444444444 8999999
Q ss_pred ecCCccccC----CCChhhHH-h-----hhhhhc---cchhhh-H-HHHHhccCCEEEecCHHHHhhcccCccccccccc
Q 003726 426 AHALEKTKY----PDSDLYWR-K-----FEEKYH---FSSQFT-A-DLTAMNNADFIITSTYQEIAGSKNNVGQYENHTA 490 (800)
Q Consensus 426 ~H~l~~~~~----~~s~~~~~-~-----~~~~y~---f~~~~~-~-e~~a~~~AD~IIt~S~~ei~~~~~~~gqy~~~~~ 490 (800)
+|+...... +.....+. . ....+. ...+.. . .......++.++++|....+...+.
T Consensus 83 ~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~~~~~~~~--------- 153 (365)
T cd03825 83 LHDMWPFTGGCHYPGGCDRYKTECGNCPQLGSYPEKDLSRWIWRRKRKAWADLNLTIVAPSRWLADCARSS--------- 153 (365)
T ss_pred cccCcccccccCCccccccccccCCCCCCCCCCCcccHHHHHHHHHHHHhccCCcEEEehhHHHHHHHHhc---------
Confidence 998643211 10000000 0 000000 000100 0 1112256778888887543321111
Q ss_pred cccccceeeeccCCCCCCceEEecCCCCCCCCCCCChHHHHHHHhhccccccccCCccccccccccCCCCCcEEEEEecC
Q 003726 491 FTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLYDPKQNDEHVGILNDRSKPLIFSMARL 570 (800)
Q Consensus 491 f~~p~l~~vv~Gi~v~~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~Gll~~~~k~iIl~vGRL 570 (800)
..+...++.|||||+|.+.|.|......+ +.+++ +++++++++.|+.
T Consensus 154 ------------~~~~~~~~~vi~ngi~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~~~~ 200 (365)
T cd03825 154 ------------SLFKGIPIEVIPNGIDTTIFRPRDKREAR-------------------KRLGL--PADKKIILFGAVG 200 (365)
T ss_pred ------------cccCCCceEEeCCCCcccccCCCcHHHHH-------------------HHhCC--CCCCeEEEEEecC
Confidence 11225789999999999988775443221 33455 5566777777777
Q ss_pred CC--CCCHHHHHHHHHHhhcc-CCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEcccccCccC-hHH
Q 003726 571 DG--VKNLTGLVECYGKSSKL-RELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISAQMNRVR-NGE 646 (800)
Q Consensus 571 ~~--~Kgl~~LleA~~~l~~~-~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~~~~~v~-~~e 646 (800)
.. .||++.++++++.+.+. .+++.++++|++.. ... .++..+|.|+|+ ++ .++
T Consensus 201 ~~~~~K~~~~ll~a~~~l~~~~~~~~~~~i~G~~~~------------~~~-------~~~~~~v~~~g~----~~~~~~ 257 (365)
T cd03825 201 GTDPRKGFDELIEALKRLAERWKDDIELVVFGASDP------------EIP-------PDLPFPVHYLGS----LNDDES 257 (365)
T ss_pred CCccccCHHHHHHHHHHhhhccCCCeEEEEeCCCch------------hhh-------ccCCCceEecCC----cCCHHH
Confidence 65 89999999999998764 57899999999866 111 145678999994 44 578
Q ss_pred HHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHH
Q 003726 647 LYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPS 726 (800)
Q Consensus 647 l~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~ 726 (800)
+..+++. +|++++||..|+||++++|||+||+|||+++.||..|++.++.+|+++++.|+++++++|.+++ .|++
T Consensus 258 ~~~~~~~-ad~~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~----~~~~ 332 (365)
T cd03825 258 LALIYSA-ADVFVVPSLQENFPNTAIEALACGTPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLL----ADPD 332 (365)
T ss_pred HHHHHHh-CCEEEeccccccccHHHHHHHhcCCCEEEecCCCChhheeCCCceEEeCCCCHHHHHHHHHHHH----hCHH
Confidence 8888886 9999999999999999999999999999999999999999999999999999999999997776 8999
Q ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003726 727 HWNKISDGGLKRIYERYTWKIYSERLLTLAG 757 (800)
Q Consensus 727 ~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 757 (800)
.+.+|++++++.+.++|||+.++++|+++|+
T Consensus 333 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~ 363 (365)
T cd03825 333 EREELGEAARELAENEFDSRVQAKRYLSLYE 363 (365)
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 9999999999999999999999999999986
No 48
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=100.00 E-value=9.7e-33 Score=312.73 Aligned_cols=392 Identities=14% Similarity=0.083 Sum_probs=257.1
Q ss_pred CceeEEEEEccCcCCCCccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCccccccee
Q 003726 265 PMVFNVVIVSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIQNQGLDVIPKILIVTRLIPDAKGTTCNQRLER 344 (800)
Q Consensus 265 p~~~rI~ivs~hg~~~~~~~lg~p~tGG~~vyild~araL~~eLa~~L~~~GheV~~~i~VvTr~~p~~~g~~~~~~~e~ 344 (800)
|...||++++... +|.+..+. ++|++|+++||+|+ |+|...+.. .+.
T Consensus 1 ~~~~~~~~~~~~~-------------~~~~~R~~--------~~a~~L~~~G~~V~----ii~~~~~~~--------~~~ 47 (415)
T cd03816 1 PKRKRVCVLVLGD-------------IGRSPRMQ--------YHALSLAKHGWKVD----LVGYLETPP--------HDE 47 (415)
T ss_pred CCccEEEEEEecc-------------cCCCHHHH--------HHHHHHHhcCceEE----EEEecCCCC--------CHH
Confidence 3456888888622 35555667 56777899999999 888653221 111
Q ss_pred ecCCCCeEEEEeccCCCCccccccccccCChhhHHHHHH---HHHHHHHHHhCCCceEEEECCCCc---hHHHHHHHhcC
Q 003726 345 ISGTEHTHILRVPFRTENGILRKWISRFDVWPYLETFAE---DASNEIAAELQGVPDLIIGNYSDG---NLVATLLSYKL 418 (800)
Q Consensus 345 ~~g~~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~---~~~~~ll~~~~~~PDIIh~h~~~~---~lva~lla~~~ 418 (800)
.....++.+++++..+... ........++..... .....++. ..+||+||+|.+.. ..++.++++..
T Consensus 48 ~~~~~~v~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~Dvi~~~~~~~~~~~~~a~~~~~~~ 120 (415)
T cd03816 48 ILSNPNITIHPLPPPPQRL-----NKLPFLLFAPLKVLWQFFSLLWLLYK--LRPADYILIQNPPSIPTLLIAWLYCLLR 120 (415)
T ss_pred HhcCCCEEEEECCCCcccc-----ccchHHHHHHHHHHHHHHHHHHHHHh--cCCCCEEEEeCCCCchHHHHHHHHHHHh
Confidence 1123468888876643100 000011112111111 11111222 34899999987553 44566677778
Q ss_pred CCeEEEEecCCccccCCCChhhHHhhhhhhccchhhhHHHHHhccCCEEEecCHHHHhhcccCcccccccccccccccee
Q 003726 419 GVTQCNIAHALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNNADFIITSTYQEIAGSKNNVGQYENHTAFTLPGLYR 498 (800)
Q Consensus 419 gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ei~~~~~~~gqy~~~~~f~~p~l~~ 498 (800)
++|+|++.|+.+....... .........+ ....|++.++.||.||++|+...+...+
T Consensus 121 ~~~~V~~~h~~~~~~~~~~---~~~~~~~~~~--~~~~e~~~~~~ad~ii~vS~~~~~~l~~------------------ 177 (415)
T cd03816 121 RTKLIIDWHNYGYTILALK---LGENHPLVRL--AKWYEKLFGRLADYNLCVTKAMKEDLQQ------------------ 177 (415)
T ss_pred CCeEEEEcCCchHHHHhcc---cCCCCHHHHH--HHHHHHHHhhcCCEeeecCHHHHHHHHh------------------
Confidence 9999999998642111000 0000000011 1124677889999999999976552111
Q ss_pred eeccCCCCCCceEEecCCCCCCCCCCCChHHHHHHHhhccccccccCCc-cccccccccCCCCCcEEEEEecCCCCCCHH
Q 003726 499 VVHGIDVFDPKFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLYDPK-QNDEHVGILNDRSKPLIFSMARLDGVKNLT 577 (800)
Q Consensus 499 vv~Gi~v~~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~-~~~~~~Gll~~~~k~iIl~vGRL~~~Kgl~ 577 (800)
.|+ ...|+.||||| +...|.|......+.... . . ..-+... ......+.. .++..+++++||+.+.||++
T Consensus 178 --~~~--~~~ki~vI~Ng-~~~~f~p~~~~~~~~~~~-~-~-~~~~~~~~~~~~~~~~~-~~~~~vi~~~grl~~~K~~~ 248 (415)
T cd03816 178 --FNN--WKIRATVLYDR-PPEQFRPLPLEEKHELFL-K-L-AKTFLTRELRIGAVQLS-EERPALLVSSTSWTPDEDFG 248 (415)
T ss_pred --hhc--cCCCeeecCCC-CHHHceeCcHHHHHHHHH-h-c-cccccccccccccceec-CCCceEEEEeccccCCCCHH
Confidence 133 26899999999 456677765432211000 0 0 0000000 000011221 23456788899999999999
Q ss_pred HHHHHHHHhhc------cCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEcccccCccChHHHHHHH
Q 003726 578 GLVECYGKSSK------LRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISAQMNRVRNGELYRYI 651 (800)
Q Consensus 578 ~LleA~~~l~~------~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~~~~~v~~~el~~~i 651 (800)
.|++|+..+.+ .+|+++|+|+|+|+. .+.++++++++++.+.+.+.| .++.+++..++
T Consensus 249 ~li~A~~~l~~~~~~~~~~~~i~l~ivG~G~~------------~~~l~~~~~~~~l~~~~~~~g----~~~~~~~~~~l 312 (415)
T cd03816 249 ILLDALVAYEKSAATGPKLPKLLCIITGKGPL------------KEKYLERIKELKLKKVTIRTP----WLSAEDYPKLL 312 (415)
T ss_pred HHHHHHHHHHHhhcccccCCCEEEEEEecCcc------------HHHHHHHHHHcCCCcEEEEcC----cCCHHHHHHHH
Confidence 99999999864 247899999999987 678999999999965444555 56679999999
Q ss_pred HccCcEEEecC---CCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCC---H
Q 003726 652 ADTRGVFVQPA---FYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYND---P 725 (800)
Q Consensus 652 a~aadvfV~PS---~~E~fGl~vlEAMA~GlPVIAT~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~d---p 725 (800)
+. +|++|.|+ ..|+||++++||||||+|||+|+.||..|+|+++.+|++++ |++++|++|..++ +| |
T Consensus 313 ~~-aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~~~eiv~~~~~G~lv~--d~~~la~~i~~ll----~~~~~~ 385 (415)
T cd03816 313 AS-ADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCIDELVKHGENGLVFG--DSEELAEQLIDLL----SNFPNR 385 (415)
T ss_pred Hh-CCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCCHHHHhcCCCCEEEEC--CHHHHHHHHHHHH----hcCCCH
Confidence 96 99999753 35789999999999999999999999999999999999994 8999999997776 67 9
Q ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 003726 726 SHWNKISDGGLKRIYERYTWKIYSERLL 753 (800)
Q Consensus 726 ~~~~~ms~~a~~~v~~~ysw~~~a~~ll 753 (800)
+.+++|+++|++.+ .++|+...++.+
T Consensus 386 ~~~~~m~~~~~~~~--~~~~~~~~~~~~ 411 (415)
T cd03816 386 GKLNSLKKGAQEES--ELRWDENWDRVV 411 (415)
T ss_pred HHHHHHHHHHHHhh--hcCHHHHHHHHh
Confidence 99999999999986 788887665554
No 49
>PLN02846 digalactosyldiacylglycerol synthase
Probab=100.00 E-value=6e-33 Score=314.20 Aligned_cols=372 Identities=13% Similarity=0.095 Sum_probs=241.6
Q ss_pred eeEEEEEccCcCCCCccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHCC-CccccceeEEeCCCCCCCC-------Ccc
Q 003726 267 VFNVVIVSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIQNQG-LDVIPKILIVTRLIPDAKG-------TTC 338 (800)
Q Consensus 267 ~~rI~ivs~hg~~~~~~~lg~p~tGG~~vyild~araL~~eLa~~L~~~G-heV~~~i~VvTr~~p~~~g-------~~~ 338 (800)
-|||+|++..+. |..+|..+.++ .++..|+++| |+|+ |+....+.... .++
T Consensus 4 ~mrIaivTdt~l---------P~vnGva~s~~--------~~a~~L~~~G~heV~----vvaP~~~~~~~~~~~~~~~~f 62 (462)
T PLN02846 4 KQHIAIFTTASL---------PWMTGTAVNPL--------FRAAYLAKDGDREVT----LVIPWLSLKDQKLVYPNKITF 62 (462)
T ss_pred CCEEEEEEcCCC---------CCCCCeeccHH--------HHHHHHHhcCCcEEE----EEecCCccccccccccccccc
Confidence 489999998776 56789999999 6777889999 7999 99887653211 011
Q ss_pred cccce---eecCCCCeEEEEeccCCCCcccccccc--ccCChhhHHHHHHHHHHHHHHHhCCCceEEEECCCCc-hHH--
Q 003726 339 NQRLE---RISGTEHTHILRVPFRTENGILRKWIS--RFDVWPYLETFAEDASNEIAAELQGVPDLIIGNYSDG-NLV-- 410 (800)
Q Consensus 339 ~~~~e---~~~g~~~v~I~rvp~~~~~~~~~~~is--r~~i~~yl~~f~~~~~~~ll~~~~~~PDIIh~h~~~~-~lv-- 410 (800)
....+ .+....+.++.|+|..+...+ +..++ +..+++. .+ +.++++ +.+|||||.+.+.. ++.
T Consensus 63 ~~~~~~e~~~~~~~~~~v~r~~s~~~p~y-p~r~~~~~r~~~~~-----~~-i~~~l~--~~~pDVIHv~tP~~LG~~~~ 133 (462)
T PLN02846 63 SSPSEQEAYVRQWLEERISFLPKFSIKFY-PGKFSTDKRSILPV-----GD-ISETIP--DEEADIAVLEEPEHLTWYHH 133 (462)
T ss_pred cCchhhhhhhhhhccCeEEEecccccccC-cccccccccccCCh-----HH-HHHHHH--hcCCCEEEEcCchhhhhHHH
Confidence 11111 011111235556543322111 11010 0111111 12 223333 24999999998775 554
Q ss_pred HHHHHhcCCCeEEEEecCCccccCCCChh-hHHhhhhhhccchhhhHHHHHhccCCEEEecCHHHHhhcccCcccccccc
Q 003726 411 ATLLSYKLGVTQCNIAHALEKTKYPDSDL-YWRKFEEKYHFSSQFTADLTAMNNADFIITSTYQEIAGSKNNVGQYENHT 489 (800)
Q Consensus 411 a~lla~~~gip~v~t~H~l~~~~~~~s~~-~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ei~~~~~~~gqy~~~~ 489 (800)
+...++++++ +|.++|+-.....+.... ....+.. .+..++ ..-.++|.+++.|....+ .
T Consensus 134 g~~~~~k~~~-vV~tyHT~y~~Y~~~~~~g~~~~~l~--~~~~~~----~~r~~~d~vi~pS~~~~~-l----------- 194 (462)
T PLN02846 134 GKRWKTKFRL-VIGIVHTNYLEYVKREKNGRVKAFLL--KYINSW----VVDIYCHKVIRLSAATQD-Y----------- 194 (462)
T ss_pred HHHHHhcCCc-EEEEECCChHHHHHHhccchHHHHHH--HHHHHH----HHHHhcCEEEccCHHHHH-H-----------
Confidence 6667777766 888999832111000000 0001000 001111 111348999999974322 0
Q ss_pred ccccccceeeeccCCCCCCceEEecCCCCCCCCCCCChHHHHHHHhhccccccccCCccccccccccCCCCCcEEEEEec
Q 003726 490 AFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLYDPKQNDEHVGILNDRSKPLIFSMAR 569 (800)
Q Consensus 490 ~f~~p~l~~vv~Gi~v~~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~Gll~~~~k~iIl~vGR 569 (800)
.....+.++|||.+.|.|....... ..+ ..+.-.+.++|+||
T Consensus 195 -----------------~~~~i~~v~GVd~~~f~~~~~~~~~--------------------~~~-~~~~~~~~~l~vGR 236 (462)
T PLN02846 195 -----------------PRSIICNVHGVNPKFLEIGKLKLEQ--------------------QKN-GEQAFTKGAYYIGK 236 (462)
T ss_pred -----------------hhCEEecCceechhhcCCCcccHhh--------------------hcC-CCCCcceEEEEEec
Confidence 1123334589999988775432111 011 00112357899999
Q ss_pred CCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEcccccCccChHHHHH
Q 003726 570 LDGVKNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISAQMNRVRNGELYR 649 (800)
Q Consensus 570 L~~~Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~~~~~v~~~el~~ 649 (800)
|.+.||++.|++|++++.+..++++|+|+|+|++ .++++++++++++..++ |.|. ...+ .
T Consensus 237 L~~eK~~~~Li~a~~~l~~~~~~~~l~ivGdGp~------------~~~L~~~a~~l~l~~~v-f~G~----~~~~---~ 296 (462)
T PLN02846 237 MVWSKGYKELLKLLHKHQKELSGLEVDLYGSGED------------SDEVKAAAEKLELDVRV-YPGR----DHAD---P 296 (462)
T ss_pred CcccCCHHHHHHHHHHHHhhCCCeEEEEECCCcc------------HHHHHHHHHhcCCcEEE-ECCC----CCHH---H
Confidence 9999999999999999887778999999999998 77899999999986555 7773 2333 3
Q ss_pred HHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHH
Q 003726 650 YIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWN 729 (800)
Q Consensus 650 ~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~ 729 (800)
+++ .+|+||+||..|+||++++||||||+|||+++.++ .+++.++.+|+.++ |.++++++|..++. .++ .
T Consensus 297 ~~~-~~DvFv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~-~~~v~~~~ng~~~~--~~~~~a~ai~~~l~---~~~---~ 366 (462)
T PLN02846 297 LFH-DYKVFLNPSTTDVVCTTTAEALAMGKIVVCANHPS-NEFFKQFPNCRTYD--DGKGFVRATLKALA---EEP---A 366 (462)
T ss_pred HHH-hCCEEEECCCcccchHHHHHHHHcCCcEEEecCCC-cceeecCCceEecC--CHHHHHHHHHHHHc---cCc---h
Confidence 555 48999999999999999999999999999999998 59999999999995 89999999988773 233 2
Q ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 003726 730 KISDGGLKRIYERYTWKIYSERLLTLAGVY 759 (800)
Q Consensus 730 ~ms~~a~~~v~~~ysw~~~a~~ll~ly~~~ 759 (800)
.++.+++ ++|||+..+++++++|+.=
T Consensus 367 ~~~~~a~----~~~SWe~~~~~l~~~~~~~ 392 (462)
T PLN02846 367 PLTDAQR----HELSWEAATERFLRVADLD 392 (462)
T ss_pred hHHHHHH----HhCCHHHHHHHHHHHhccC
Confidence 2333322 5999999999999999764
No 50
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=100.00 E-value=2.3e-32 Score=294.06 Aligned_cols=356 Identities=19% Similarity=0.244 Sum_probs=259.8
Q ss_pred EEEEEccCcCCCCccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCcccccceeecCC
Q 003726 269 NVVIVSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIQNQGLDVIPKILIVTRLIPDAKGTTCNQRLERISGT 348 (800)
Q Consensus 269 rI~ivs~hg~~~~~~~lg~p~tGG~~vyild~araL~~eLa~~L~~~GheV~~~i~VvTr~~p~~~g~~~~~~~e~~~g~ 348 (800)
||+++++. .||.+.++. .|++.|.++||+|+ +++....... ....
T Consensus 1 kIl~i~~~-------------~~g~~~~~~--------~l~~~L~~~g~~v~----~~~~~~~~~~----------~~~~ 45 (359)
T cd03808 1 KILHIVTV-------------DGGLYSFRL--------PLIKALRAAGYEVH----VVAPPGDELE----------ELEA 45 (359)
T ss_pred CeeEEEec-------------chhHHHHHH--------HHHHHHHhcCCeeE----EEecCCCccc----------cccc
Confidence 57888764 278899999 66777788999999 8886532221 1112
Q ss_pred CCeEEEEeccCCCCccccccccccCChhhHHHHHHHHHHHHHHHhCCCceEEEECCCCchHHHHHHHh-cCCCeEEEEec
Q 003726 349 EHTHILRVPFRTENGILRKWISRFDVWPYLETFAEDASNEIAAELQGVPDLIIGNYSDGNLVATLLSY-KLGVTQCNIAH 427 (800)
Q Consensus 349 ~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~ll~~~~~~PDIIh~h~~~~~lva~lla~-~~gip~v~t~H 427 (800)
.++.+..+|..... . ..+..+. .... ...+++ +.+||+||++.....+++.+.++ ..+.+++.+.|
T Consensus 46 ~~~~~~~~~~~~~~------~---~~~~~~~-~~~~-~~~~~~--~~~~dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 112 (359)
T cd03808 46 LGVKVIPIPLDRRG------I---NPFKDLK-ALLR-LYRLLR--KERPDIVHTHTPKPGILGRLAARLAGVPKVIYTVH 112 (359)
T ss_pred CCceEEeccccccc------c---ChHhHHH-HHHH-HHHHHH--hcCCCEEEEccccchhHHHHHHHHcCCCCEEEEec
Confidence 35677777654310 1 1111111 1111 222233 34999999998877777777776 44567778888
Q ss_pred CCccccCCCChhhHHhhhhhhccchhhhHHHHHhccCCEEEecCHHHHhhcccCccccccccccccccceeeeccCCCCC
Q 003726 428 ALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNNADFIITSTYQEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFD 507 (800)
Q Consensus 428 ~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~ 507 (800)
+....... ...... . ....++..++.+|.+++.|....+...+. .+.+ ..
T Consensus 113 ~~~~~~~~-~~~~~~----~-----~~~~~~~~~~~~d~ii~~s~~~~~~~~~~-------------------~~~~-~~ 162 (359)
T cd03808 113 GLGFVFTS-GGLKRR----L-----YLLLERLALRFTDKVIFQNEDDRDLALKL-------------------GIIK-KK 162 (359)
T ss_pred Ccchhhcc-chhHHH----H-----HHHHHHHHHhhccEEEEcCHHHHHHHHHh-------------------cCCC-cC
Confidence 76432211 111110 0 11235667889999999998765521111 1111 13
Q ss_pred CceEEecCCCCCCCCCCCChHHHHHHHhhccccccccCCccccccccccCCCCCcEEEEEecCCCCCCHHHHHHHHHHhh
Q 003726 508 PKFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLYDPKQNDEHVGILNDRSKPLIFSMARLDGVKNLTGLVECYGKSS 587 (800)
Q Consensus 508 ~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~l~ 587 (800)
.++.++++|+|.+.+.+.... ..++++.++++|++.+.||++.+++++..+.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~ 214 (359)
T cd03808 163 KTVLIPGSGVDLDRFSPSPEP----------------------------IPEDDPVFLFVARLLKDKGIDELLEAARILK 214 (359)
T ss_pred ceEEecCCCCChhhcCccccc----------------------------cCCCCcEEEEEeccccccCHHHHHHHHHHHH
Confidence 567888999998877553210 0356789999999999999999999999998
Q ss_pred ccCCCeEEEEEeccCCCCCccchHHHHHHHHHHH-HHHHcCCCCcEEEcccccCccChHHHHHHHHccCcEEEecCCCCC
Q 003726 588 KLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHG-LIKQYNLHGQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEA 666 (800)
Q Consensus 588 ~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~-li~~~gL~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~ 666 (800)
+..++++|+|+|++.. ...... ++.+.+..++|.|.|. .+++..+++. +|++++||..|+
T Consensus 215 ~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~~~~-adi~i~ps~~e~ 275 (359)
T cd03808 215 AKGPNVRLLLVGDGDE------------ENPAAILEIEKLGLEGRVEFLGF------RDDVPELLAA-ADVFVLPSYREG 275 (359)
T ss_pred hcCCCeEEEEEcCCCc------------chhhHHHHHHhcCCcceEEEeec------cccHHHHHHh-ccEEEecCcccC
Confidence 7788999999999976 111111 3667777889999994 3578888886 999999999999
Q ss_pred CcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHH
Q 003726 667 FGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWK 746 (800)
Q Consensus 667 fGl~vlEAMA~GlPVIAT~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~ 746 (800)
||++++|||+||+|||+|+.|+..|++.++.+|++++++|+++++++|.+++ .|++.+.++++++++.+.++|||+
T Consensus 276 ~~~~~~Ea~~~G~Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~~~i~~l~----~~~~~~~~~~~~~~~~~~~~~s~~ 351 (359)
T cd03808 276 LPRVLLEAMAMGRPVIATDVPGCREAVIDGVNGFLVPPGDAEALADAIERLI----EDPELRARMGQAARKRAEEEFDEE 351 (359)
T ss_pred cchHHHHHHHcCCCEEEecCCCchhhhhcCcceEEECCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhcCHH
Confidence 9999999999999999999999999999999999999999999999997765 899999999999999999999999
Q ss_pred HHHHHHH
Q 003726 747 IYSERLL 753 (800)
Q Consensus 747 ~~a~~ll 753 (800)
.++++++
T Consensus 352 ~~~~~~~ 358 (359)
T cd03808 352 IVVKKLL 358 (359)
T ss_pred HHHHHhh
Confidence 9999886
No 51
>PRK10125 putative glycosyl transferase; Provisional
Probab=100.00 E-value=5.7e-33 Score=313.48 Aligned_cols=277 Identities=16% Similarity=0.123 Sum_probs=191.5
Q ss_pred CCCceEEEECCCCc---hHHHH------HHHhcCCCeEEEEecCCcccc----CCCChhhHHhhh--------------h
Q 003726 394 QGVPDLIIGNYSDG---NLVAT------LLSYKLGVTQCNIAHALEKTK----YPDSDLYWRKFE--------------E 446 (800)
Q Consensus 394 ~~~PDIIh~h~~~~---~lva~------lla~~~gip~v~t~H~l~~~~----~~~s~~~~~~~~--------------~ 446 (800)
..+|||||.|...+ ++... +..+..++|+|+|.|+.+... |+..-..|+.-. +
T Consensus 92 ~~~pDviHlH~~~~~~~~~~~l~~~~~~~~~~~~~~piV~TlHd~~~~tg~c~~~~~C~~~~~~c~~Cp~l~~~~~~~~d 171 (405)
T PRK10125 92 TPGPVVLHFHVLHSYWLNLKSVVRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCPTLNNYPPVKVD 171 (405)
T ss_pred ccCCCEEEEecccCceecHHHHHHHHhhhhcccCCCCEEEecccccccCCCcCCCcccccccccCCCCCCccCCCCCccc
Confidence 45999999998776 33211 112345799999999987432 111001111100 0
Q ss_pred h--hccchhhhHHHHHhccCCEEEecCHHHHhhcccCccccccccccccccceeeeccCCCCCCceEEecCCCCCCCCCC
Q 003726 447 K--YHFSSQFTADLTAMNNADFIITSTYQEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFP 524 (800)
Q Consensus 447 ~--y~f~~~~~~e~~a~~~AD~IIt~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~~k~~VIpnGvD~~~f~p 524 (800)
. ..+......-....+.++.+|++|....+.... ..+ ..++.|||||+|++.+.+
T Consensus 172 ~~~~~~~~k~~~~~~~~~~~~~iV~~S~~l~~~~~~---------------------~~~--~~~i~vI~NGid~~~~~~ 228 (405)
T PRK10125 172 RAHQLVAGKRQLFREMLALGCQFISPSQHVADAFNS---------------------LYG--PGRCRIINNGIDMATEAI 228 (405)
T ss_pred hHHHHHHHHHHHHHHHhhcCcEEEEcCHHHHHHHHH---------------------HcC--CCCEEEeCCCcCcccccc
Confidence 0 000011011112345678999999865542110 111 468999999999754433
Q ss_pred CChHHHHHHHhhccccccccCCccccccccccCCCCCcEEEEEecC--CCCCCHHHHHHHHHHhhccCCCeEEEEEeccC
Q 003726 525 YSDKEKRLIALHGQIEDLLYDPKQNDEHVGILNDRSKPLIFSMARL--DGVKNLTGLVECYGKSSKLRELVNLVVVGGYM 602 (800)
Q Consensus 525 ~~~~~~rl~~~~~~~~~~l~~~~~~~~~~Gll~~~~k~iIl~vGRL--~~~Kgl~~LleA~~~l~~~~~~v~LvIVG~g~ 602 (800)
...... .. ..+++++|+++|+. .+.||++.|++|+.++. ++++|+++|++.
T Consensus 229 ~~~~~~----------------------~~--~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l~---~~~~L~ivG~g~ 281 (405)
T PRK10125 229 LAELPP----------------------VR--ETQGKPKIAVVAHDLRYDGKTDQQLVREMMALG---DKIELHTFGKFS 281 (405)
T ss_pred cccccc----------------------cc--cCCCCCEEEEEEeccccCCccHHHHHHHHHhCC---CCeEEEEEcCCC
Confidence 211100 00 03467789999994 46899999999999763 579999999875
Q ss_pred CCCCccchHHHHHHHHHHHHHHHcCCCCcEEEcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEE
Q 003726 603 DVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTF 682 (800)
Q Consensus 603 ~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVI 682 (800)
. . . ..+|.++|... +..++..+|+. +|+||+||.+|+||++++||||||+|||
T Consensus 282 ~------------~-~----------~~~v~~~g~~~---~~~~l~~~y~~-aDvfV~pS~~Egfp~vilEAmA~G~PVV 334 (405)
T PRK10125 282 P------------F-T----------AGNVVNHGFET---DKRKLMSALNQ-MDALVFSSRVDNYPLILCEALSIGVPVI 334 (405)
T ss_pred c------------c-c----------ccceEEecCcC---CHHHHHHHHHh-CCEEEECCccccCcCHHHHHHHcCCCEE
Confidence 4 0 0 24688888543 35688888886 9999999999999999999999999999
Q ss_pred EcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHH----HHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003726 683 ATCHGGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNK----ISDGGLKRIYERYTWKIYSERLLTLAG 757 (800)
Q Consensus 683 AT~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~----ms~~a~~~v~~~ysw~~~a~~ll~ly~ 757 (800)
+|+.||++|+|.++ +|++++|+|++++|+++ +++..++ +.+++++++.++|||+.++++|+++|+
T Consensus 335 at~~gG~~Eiv~~~-~G~lv~~~d~~~La~~~---------~~~~~~~~~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~ 403 (405)
T PRK10125 335 ATHSDAAREVLQKS-GGKTVSEEEVLQLAQLS---------KPEIAQAVFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQ 403 (405)
T ss_pred EeCCCChHHhEeCC-cEEEECCCCHHHHHhcc---------CHHHHHHhhhhHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 99999999999775 99999999999999754 4443333 346688999999999999999999996
No 52
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=100.00 E-value=3.5e-32 Score=291.30 Aligned_cols=345 Identities=19% Similarity=0.259 Sum_probs=252.2
Q ss_pred EEEEEccCcCCCCccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCcccccceeecCC
Q 003726 269 NVVIVSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIQNQGLDVIPKILIVTRLIPDAKGTTCNQRLERISGT 348 (800)
Q Consensus 269 rI~ivs~hg~~~~~~~lg~p~tGG~~vyild~araL~~eLa~~L~~~GheV~~~i~VvTr~~p~~~g~~~~~~~e~~~g~ 348 (800)
||++++++..+ .||...++. +|++.|+++||+|+ +++...... ... ...
T Consensus 1 kI~i~~~~~~~----------~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~-------~~~--~~~ 49 (348)
T cd03820 1 KILFVIPSLGN----------AGGAERVLS--------NLANALAEKGHEVT----IISLDKGEP-------PFY--ELD 49 (348)
T ss_pred CeEEEeccccC----------CCChHHHHH--------HHHHHHHhCCCeEE----EEecCCCCC-------Ccc--ccC
Confidence 68888876652 589999999 66667788999999 888664330 000 111
Q ss_pred CCeEEEEeccCCCCccccccccccCChhhHHHHHHHHHHHHHHHhCCCceEEEECCCCchHHHHHHHhcCC-CeEEEEec
Q 003726 349 EHTHILRVPFRTENGILRKWISRFDVWPYLETFAEDASNEIAAELQGVPDLIIGNYSDGNLVATLLSYKLG-VTQCNIAH 427 (800)
Q Consensus 349 ~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~ll~~~~~~PDIIh~h~~~~~lva~lla~~~g-ip~v~t~H 427 (800)
.++.+..++...... .+.+. .+. .....+++ ..+||+||++.+. ....+.....+ +|++.+.|
T Consensus 50 ~~~~~~~~~~~~~~~----------~~~~~-~~~-~~~~~~l~--~~~~d~i~~~~~~--~~~~~~~~~~~~~~~i~~~~ 113 (348)
T cd03820 50 PKIKVIDLGDKRDSK----------LLARF-KKL-RRLRKLLK--NNKPDVVISFLTS--LLTFLASLGLKIVKLIVSEH 113 (348)
T ss_pred Cccceeecccccccc----------hhccc-cch-HHHHHhhc--ccCCCEEEEcCch--HHHHHHHHhhccccEEEecC
Confidence 245555554432110 00000 011 11222333 3499999999877 22222333344 49999999
Q ss_pred CCccccCCCChhhHHhhhhhhccchhhhHHHHHhccCCEEEecCHHHHhhcccCccccccccccccccceeeeccCCCCC
Q 003726 428 ALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNNADFIITSTYQEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFD 507 (800)
Q Consensus 428 ~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~ 507 (800)
....... ....+. ..+...++.+|.+++.|...... + .....
T Consensus 114 ~~~~~~~--~~~~~~------------~~~~~~~~~~d~ii~~s~~~~~~-------~-----------------~~~~~ 155 (348)
T cd03820 114 NSPDAYK--KRLRRL------------LLRRLLYRRADAVVVLTEEDRAL-------Y-----------------YKKFN 155 (348)
T ss_pred CCccchh--hhhHHH------------HHHHHHHhcCCEEEEeCHHHHHH-------h-----------------hccCC
Confidence 7533210 000000 03456889999999999865310 0 01125
Q ss_pred CceEEecCCCCCCCCCCCChHHHHHHHhhccccccccCCccccccccccCCCCCcEEEEEecCCCCCCHHHHHHHHHHhh
Q 003726 508 PKFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLYDPKQNDEHVGILNDRSKPLIFSMARLDGVKNLTGLVECYGKSS 587 (800)
Q Consensus 508 ~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~l~ 587 (800)
.++.++|||+|...+.+. ...+++.++++|++.+.||++.+++++.++.
T Consensus 156 ~~~~vi~~~~~~~~~~~~-------------------------------~~~~~~~i~~~g~~~~~K~~~~l~~~~~~l~ 204 (348)
T cd03820 156 KNVVVIPNPLPFPPEEPS-------------------------------SDLKSKRILAVGRLVPQKGFDLLIEAWAKIA 204 (348)
T ss_pred CCeEEecCCcChhhcccc-------------------------------CCCCCcEEEEEEeeccccCHHHHHHHHHHHH
Confidence 689999999998765442 0346788999999999999999999999998
Q ss_pred ccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEcccccCccChHHHHHHHHccCcEEEecCCCCCC
Q 003726 588 KLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAF 667 (800)
Q Consensus 588 ~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~f 667 (800)
+..++++|+|+|++.. ...+.++++++++.++|.+.|. .+++..+++. +|+++.||.+|+|
T Consensus 205 ~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~~~~-ad~~i~ps~~e~~ 265 (348)
T cd03820 205 KKHPDWKLRIVGDGPE------------REALEALIKELGLEDRVILLGF------TKNIEEYYAK-ASIFVLTSRFEGF 265 (348)
T ss_pred hcCCCeEEEEEeCCCC------------HHHHHHHHHHcCCCCeEEEcCC------cchHHHHHHh-CCEEEeCcccccc
Confidence 8889999999999877 5667778899999999999984 4688899996 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCcc-ccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHH
Q 003726 668 GLTVVEAMTCGLPTFATCHG-GPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWK 746 (800)
Q Consensus 668 Gl~vlEAMA~GlPVIAT~~G-G~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~ 746 (800)
|++++|||+||+|||+|+.+ +..+++.++.+|+++++.|+++++++|.+++ .||+.+++|++++++. .++|+|+
T Consensus 266 ~~~~~Ea~a~G~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ll----~~~~~~~~~~~~~~~~-~~~~~~~ 340 (348)
T cd03820 266 PMVLLEAMAFGLPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLM----EDEELRKRMGANARES-AERFSIE 340 (348)
T ss_pred CHHHHHHHHcCCCEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHH-HHHhCHH
Confidence 99999999999999999865 5677777777999999999999999998776 8999999999999665 4899999
Q ss_pred HHHHHHH
Q 003726 747 IYSERLL 753 (800)
Q Consensus 747 ~~a~~ll 753 (800)
.++++|.
T Consensus 341 ~~~~~~~ 347 (348)
T cd03820 341 NIIKQWE 347 (348)
T ss_pred HHHHHhc
Confidence 9998875
No 53
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=100.00 E-value=4.2e-32 Score=307.92 Aligned_cols=368 Identities=19% Similarity=0.199 Sum_probs=242.5
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHC--CCccccceeEEeCCCCCCCC------CcccccceeecCCCCeEEEEec-cCC
Q 003726 290 TGGQVVYILDQVRALENEMLLRIQNQ--GLDVIPKILIVTRLIPDAKG------TTCNQRLERISGTEHTHILRVP-FRT 360 (800)
Q Consensus 290 tGG~~vyild~araL~~eLa~~L~~~--GheV~~~i~VvTr~~p~~~g------~~~~~~~e~~~g~~~v~I~rvp-~~~ 360 (800)
.||.++.+.+.|++| .++ ||+|+ |+|........ ..|- . +... +++.++++. .+.
T Consensus 13 ggg~ervl~~a~~~l--------~~~~~~~~v~----i~t~~~~~~~~~~l~~~~~~f-~-~~~~--~~~~~~~~~~~~~ 76 (419)
T cd03806 13 GGGGERVLWCAVRAL--------QKRYPNNIVV----IYTGDLDATPEEILEKVESRF-N-IELD--RPRIVFFLLKYRK 76 (419)
T ss_pred CCCchHHHHHHHHHH--------HHhCCCcEEE----EECCCCCCCHHHHHHHHHHhc-C-eecC--CCceEEEEeccee
Confidence 369999999777776 444 88888 99988544210 0011 0 1111 244544442 111
Q ss_pred CCccccccccccCChhhHHHHHHHHHHHHHHHhCCCceEEEECCCCchHHHHHHHhcCCCeEEEEecCCccccCCCCh--
Q 003726 361 ENGILRKWISRFDVWPYLETFAEDASNEIAAELQGVPDLIIGNYSDGNLVATLLSYKLGVTQCNIAHALEKTKYPDSD-- 438 (800)
Q Consensus 361 ~~~~~~~~isr~~i~~yl~~f~~~~~~~ll~~~~~~PDIIh~h~~~~~lva~lla~~~gip~v~t~H~l~~~~~~~s~-- 438 (800)
.+.++.+.|+.++ .++...+...+....+.+||||+.+...+..+. ++....++|++..+|- ++.-...-
T Consensus 77 --~~~~~~~~r~~~~---~~~~~~~~~~~~~~~~~~pDv~i~~~g~~~~~~-~~~~~~~~~~i~y~h~--P~~~~d~l~~ 148 (419)
T cd03806 77 --LVEASTYPRFTLL---GQALGSMILGLEALLKLVPDIFIDTMGYPFTYP-LVRLLGGCPVGAYVHY--PTISTDMLQK 148 (419)
T ss_pred --eeccccCCceeeH---HHHHHHHHHHHHHHHhcCCCEEEEcCCcccHHH-HHHHhcCCeEEEEecC--CcchHHHHHH
Confidence 0111112222222 233333333333322448999998864432111 1222237899999992 21000000
Q ss_pred hhHH-------------h---h-hhhhccchhhhHHHHHhccCCEEEecCHHHHhhcccCccccccccccccccceeeec
Q 003726 439 LYWR-------------K---F-EEKYHFSSQFTADLTAMNNADFIITSTYQEIAGSKNNVGQYENHTAFTLPGLYRVVH 501 (800)
Q Consensus 439 ~~~~-------------~---~-~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~ 501 (800)
...+ . . ...|.. .....+.+.++.||.|+++|....+..++..
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~k~~y~~-~~~~~~~~~~~~aD~ii~~S~~~~~~~~~~~------------------- 208 (419)
T cd03806 149 VRSREASYNNSATIARSPVLSKAKLLYYR-LFAFLYGLAGSFADVVMVNSTWTRNHIRSLW------------------- 208 (419)
T ss_pred HhhccccccCccchhccchHHHHHHHHHH-HHHHHHHHHhhcCCEEEECCHHHHHHHHHHh-------------------
Confidence 0000 0 0 000000 0012577889999999999986555321110
Q ss_pred cCCCCCCceEEecCCCCCCCCCCCChHHHHHHHhhccccccccCCccccccccccCCCCCcEEEEEecCCCCCCHHHHHH
Q 003726 502 GIDVFDPKFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLYDPKQNDEHVGILNDRSKPLIFSMARLDGVKNLTGLVE 581 (800)
Q Consensus 502 Gi~v~~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~Gll~~~~k~iIl~vGRL~~~Kgl~~Lle 581 (800)
+. ..++.||+||+|.+.|.+.... ...++++|+|+||+.+.||++.+++
T Consensus 209 ~~---~~~~~vi~~gvd~~~~~~~~~~----------------------------~~~~~~~il~vgr~~~~K~~~~li~ 257 (419)
T cd03806 209 KR---NTKPSIVYPPCDVEELLKLPLD----------------------------EKTRENQILSIAQFRPEKNHPLQLR 257 (419)
T ss_pred Cc---CCCcEEEcCCCCHHHhcccccc----------------------------cccCCcEEEEEEeecCCCCHHHHHH
Confidence 11 2479999999998877543210 0345678999999999999999999
Q ss_pred HHHHhhccCC-----CeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEcccccCccChHHHHHHHHccCc
Q 003726 582 CYGKSSKLRE-----LVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISAQMNRVRNGELYRYIADTRG 656 (800)
Q Consensus 582 A~~~l~~~~~-----~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~~~~~v~~~el~~~ia~aad 656 (800)
|++++.+..+ +++|+|+|++.. .+..++.+.++++++++++.++|.|+| .++.+++..+++. +|
T Consensus 258 A~~~l~~~~~~~~~~~~~lvivG~~~~------~~~~~~~~~L~~~~~~l~l~~~V~f~g----~v~~~~l~~~l~~-ad 326 (419)
T cd03806 258 AFAKLLKRLPEEIKEKIKLVLIGSCRN------EDDEKRVEDLKLLAKELGLEDKVEFVV----NAPFEELLEELST-AS 326 (419)
T ss_pred HHHHHHHhCcccccCceEEEEEcCCCC------cccHHHHHHHHHHHHHhCCCCeEEEec----CCCHHHHHHHHHh-Ce
Confidence 9999987654 499999999865 122345778899999999999999999 6778999999996 99
Q ss_pred EEEecCCCCCCcHHHHHHHHcCCcEEEcCccccc-cccc---cCceEEEECCCCHHHHHHHHHHHHHHhcCCH-HHHHHH
Q 003726 657 VFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPA-EIIE---HGVSGFHIDPYHPDQVAELMIEFFEKCYNDP-SHWNKI 731 (800)
Q Consensus 657 vfV~PS~~E~fGl~vlEAMA~GlPVIAT~~GG~~-EiI~---dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp-~~~~~m 731 (800)
++|+||..|+||++++||||||+|||+++.||+. |++. ++.+|++++ |++++|++|.+++ +++ ..++.+
T Consensus 327 v~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~~--d~~~la~ai~~ll----~~~~~~~~~~ 400 (419)
T cd03806 327 IGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLAS--TAEEYAEAIEKIL----SLSEEERLRI 400 (419)
T ss_pred EEEECCccCCcccHHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEEeC--CHHHHHHHHHHHH----hCCHHHHHHH
Confidence 9999999999999999999999999999998864 7887 899999985 9999999998877 544 445555
Q ss_pred HHHHHHHHHHhCCHHHHHH
Q 003726 732 SDGGLKRIYERYTWKIYSE 750 (800)
Q Consensus 732 s~~a~~~v~~~ysw~~~a~ 750 (800)
.++++++.++|||+.+.+
T Consensus 401 -~~~~~~~~~~fs~~~f~~ 418 (419)
T cd03806 401 -RRAARSSVKRFSDEEFER 418 (419)
T ss_pred -HHHHHHHHHhhCHHHhcc
Confidence 555556779999998754
No 54
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=100.00 E-value=1.5e-32 Score=299.13 Aligned_cols=364 Identities=21% Similarity=0.264 Sum_probs=256.2
Q ss_pred EEEEEccCcCCCCccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCcccccceeecCC
Q 003726 269 NVVIVSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIQNQGLDVIPKILIVTRLIPDAKGTTCNQRLERISGT 348 (800)
Q Consensus 269 rI~ivs~hg~~~~~~~lg~p~tGG~~vyild~araL~~eLa~~L~~~GheV~~~i~VvTr~~p~~~g~~~~~~~e~~~g~ 348 (800)
||++++.+..++ ..||.+.|+. +|+++|++.||+|+ +++.......... ....
T Consensus 1 ~ili~~~~~~~~--------~~gG~~~~~~--------~l~~~L~~~~~~v~----~~~~~~~~~~~~~-----~~~~-- 53 (365)
T cd03809 1 RILIDARFLASR--------RPTGIGRYAR--------ELLRALLKLDPEEV----LLLLPGAPGLLLL-----PLRA-- 53 (365)
T ss_pred CEEEechhhhcC--------CCCcHHHHHH--------HHHHHHHhcCCceE----EEEecCccccccc-----cchh--
Confidence 578888766642 4699999999 66667799999998 7766532221100 0000
Q ss_pred CCeEEEEeccCCCCccccccccccCChhhHHHHHHHHHHHHHHHhCCCceEEEECCCCchHHHHHHHhcCCCeEEEEecC
Q 003726 349 EHTHILRVPFRTENGILRKWISRFDVWPYLETFAEDASNEIAAELQGVPDLIIGNYSDGNLVATLLSYKLGVTQCNIAHA 428 (800)
Q Consensus 349 ~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~ll~~~~~~PDIIh~h~~~~~lva~lla~~~gip~v~t~H~ 428 (800)
.... .... .....+.............+ . ..+||+||++++..... +..++|+++++|+
T Consensus 54 -~~~~---~~~~---------~~~~~~~~~~~~~~~~~~~~-~--~~~~Dii~~~~~~~~~~-----~~~~~~~i~~~hd 112 (365)
T cd03809 54 -ALRL---LLRL---------PRRLLWGLLFLLRAGDRLLL-L--LLGLDLLHSPHNTAPLL-----RLRGVPVVVTIHD 112 (365)
T ss_pred -cccc---cccc---------ccccccchhhHHHHHHHHHh-h--hcCCCeeeecccccCcc-----cCCCCCEEEEecc
Confidence 0000 0000 00111111111111111111 1 25899999998876444 6679999999999
Q ss_pred CccccCCCChhhHHhhhhhhccchhhhHHHHHhccCCEEEecCHHHHhhcccCccccccccccccccceeeeccCCCCCC
Q 003726 429 LEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNNADFIITSTYQEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFDP 508 (800)
Q Consensus 429 l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~~ 508 (800)
+.....+...... .. ......+...++.+|.+++.|+...+...+. .++ ...
T Consensus 113 ~~~~~~~~~~~~~--~~-----~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~-------------------~~~--~~~ 164 (365)
T cd03809 113 LIPLRFPEYFSPG--FR-----RYFRRLLRRALRRADAIITVSEATKRDLLRY-------------------LGV--PPD 164 (365)
T ss_pred chhhhCcccCCHH--HH-----HHHHHHHHHHHHHcCEEEEccHHHHHHHHHH-------------------hCc--CHH
Confidence 7554433221111 00 0111234668899999999998665532111 111 256
Q ss_pred ceEEecCCCCCCCCCCCChHHHHHHHhhccccccccCCccccccccccCCCCCcEEEEEecCCCCCCHHHHHHHHHHhhc
Q 003726 509 KFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLYDPKQNDEHVGILNDRSKPLIFSMARLDGVKNLTGLVECYGKSSK 588 (800)
Q Consensus 509 k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~l~~ 588 (800)
++.++|||+|...+.+..... +. .... ..++++|+++||+.+.||++.+++++.++.+
T Consensus 165 ~~~vi~~~~~~~~~~~~~~~~-~~-------------------~~~~--~~~~~~i~~~G~~~~~K~~~~~l~~~~~~~~ 222 (365)
T cd03809 165 KIVVIPLGVDPRFRPPPAEAE-VL-------------------RALY--LLPRPYFLYVGTIEPRKNLERLLEAFARLPA 222 (365)
T ss_pred HEEeeccccCccccCCCchHH-HH-------------------HHhc--CCCCCeEEEeCCCccccCHHHHHHHHHHHHH
Confidence 899999999998887654332 10 1111 4567899999999999999999999999988
Q ss_pred cCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEcccccCccChHHHHHHHHccCcEEEecCCCCCCc
Q 003726 589 LRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFG 668 (800)
Q Consensus 589 ~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fG 668 (800)
..++++|+++|++... .....+.+++.++.++|.|+| .++.+++..+++. +|+++.||..|+||
T Consensus 223 ~~~~~~l~i~G~~~~~-----------~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-~d~~l~ps~~e~~~ 286 (365)
T cd03809 223 KGPDPKLVIVGKRGWL-----------NEELLARLRELGLGDRVRFLG----YVSDEELAALYRG-ARAFVFPSLYEGFG 286 (365)
T ss_pred hcCCCCEEEecCCccc-----------cHHHHHHHHHcCCCCeEEECC----CCChhHHHHHHhh-hhhhcccchhccCC
Confidence 7778999999987651 122223336778889999999 5667899999996 99999999999999
Q ss_pred HHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHH
Q 003726 669 LTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIY 748 (800)
Q Consensus 669 l~vlEAMA~GlPVIAT~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~ 748 (800)
++++|||++|+|||+|+.|+..|++. .+|+++++.|.++++++|.+++ .|++.+.+|++++++.+ ++|||+.+
T Consensus 287 ~~~~Ea~a~G~pvI~~~~~~~~e~~~--~~~~~~~~~~~~~~~~~i~~l~----~~~~~~~~~~~~~~~~~-~~~sw~~~ 359 (365)
T cd03809 287 LPVLEAMACGTPVIASNISSLPEVAG--DAALYFDPLDPEALAAAIERLL----EDPALREELRERGLARA-KRFSWEKT 359 (365)
T ss_pred CCHHHHhcCCCcEEecCCCCccceec--CceeeeCCCCHHHHHHHHHHHh----cCHHHHHHHHHHHHHHH-HhCCHHHH
Confidence 99999999999999999999999984 4799999999999999997765 89999999999999655 89999999
Q ss_pred HHHHH
Q 003726 749 SERLL 753 (800)
Q Consensus 749 a~~ll 753 (800)
+++++
T Consensus 360 ~~~~~ 364 (365)
T cd03809 360 ARRTL 364 (365)
T ss_pred HHHHh
Confidence 99886
No 55
>PLN02949 transferase, transferring glycosyl groups
Probab=100.00 E-value=3.9e-32 Score=310.65 Aligned_cols=400 Identities=18% Similarity=0.201 Sum_probs=257.6
Q ss_pred ccCCceeEEEEEccCcCCCCccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCccccc
Q 003726 262 GRIPMVFNVVIVSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIQNQGLDVIPKILIVTRLIPDAKGTTCNQR 341 (800)
Q Consensus 262 ~~~p~~~rI~ivs~hg~~~~~~~lg~p~tGG~~vyild~araL~~eLa~~L~~~GheV~~~i~VvTr~~p~~~g~~~~~~ 341 (800)
+|....++|+++-|+.- ..||.++.+.+.|++| .++|+++. |+|+|...+.. . .+.
T Consensus 28 ~~~~~~~~v~f~HP~~~----------~ggG~ERvl~~a~~~l--------~~~~~~~~--v~iyt~~~d~~-~---~~~ 83 (463)
T PLN02949 28 ARRSRKRAVGFFHPYTN----------DGGGGERVLWCAVRAI--------QEENPDLD--CVIYTGDHDAS-P---DSL 83 (463)
T ss_pred cccCCCcEEEEECCCCC----------CCCChhhHHHHHHHHH--------HhhCCCCe--EEEEcCCCCCC-H---HHH
Confidence 34444568988866442 2369999999777765 67788544 44888663221 1 111
Q ss_pred ceeecCCCCeEEEEeccCCCCcc-ccccccccCChhhH---HHHHHHHHHHHHHHhCCCceEEEECCCCchHHHHHHHhc
Q 003726 342 LERISGTEHTHILRVPFRTENGI-LRKWISRFDVWPYL---ETFAEDASNEIAAELQGVPDLIIGNYSDGNLVATLLSYK 417 (800)
Q Consensus 342 ~e~~~g~~~v~I~rvp~~~~~~~-~~~~isr~~i~~yl---~~f~~~~~~~ll~~~~~~PDIIh~h~~~~~lva~lla~~ 417 (800)
+.....+-++++.+.+ ..-.+ .++|+.+ .+|+++ ......+...+.......||+++=.......+ .+++.
T Consensus 84 l~~~~~~~~i~~~~~~--~~v~l~~~~~~~~-~~~~~~t~~~~~~~~~~l~~~~~~~~~p~v~vDt~~~~~~~--pl~~~ 158 (463)
T PLN02949 84 AARARDRFGVELLSPP--KVVHLRKRKWIEE-ETYPRFTMIGQSLGSVYLAWEALCKFTPLYFFDTSGYAFTY--PLARL 158 (463)
T ss_pred HHHHHhhcceecCCCc--eEEEecccccccc-ccCCceehHHHHHHHHHHHHHHHHhcCCCEEEeCCCcccHH--HHHHh
Confidence 1112222233221100 00001 1345543 445542 12221111111111123566554332222111 23345
Q ss_pred CCCeEEEEecCCcccc------------CCCC----hhhH-HhhhhhhccchhhhHHHHHhccCCEEEecCHHHHhhccc
Q 003726 418 LGVTQCNIAHALEKTK------------YPDS----DLYW-RKFEEKYHFSSQFTADLTAMNNADFIITSTYQEIAGSKN 480 (800)
Q Consensus 418 ~gip~v~t~H~l~~~~------------~~~s----~~~~-~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ei~~~~~ 480 (800)
.++|++..+|-..... +..+ ...+ ......|..... ..+....+.||.|+++|....+..++
T Consensus 159 ~~~~v~~yvH~p~~~~dm~~~v~~~~~~~~~~~~~a~~~~~~~~k~~Y~~~~~-~l~~~~~~~ad~ii~nS~~t~~~l~~ 237 (463)
T PLN02949 159 FGCKVVCYTHYPTISSDMISRVRDRSSMYNNDASIARSFWLSTCKILYYRAFA-WMYGLVGRCAHLAMVNSSWTKSHIEA 237 (463)
T ss_pred cCCcEEEEEeCCcchHHHHHHHhhcccccCccchhhccchhHHHHHHHHHHHH-HHHHHHcCCCCEEEECCHHHHHHHHH
Confidence 5899999999532110 0000 0000 001111111111 14566789999999999865543221
Q ss_pred CccccccccccccccceeeeccCCCCCCceEEecCCCCCCCCCCCChHHHHHHHhhccccccccCCccccccccccCCCC
Q 003726 481 NVGQYENHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLYDPKQNDEHVGILNDRS 560 (800)
Q Consensus 481 ~~gqy~~~~~f~~p~l~~vv~Gi~v~~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~Gll~~~~ 560 (800)
.. +. +.++.||+||+|.+.+.+.... ..++
T Consensus 238 ~~-------------------~~---~~~i~vvyp~vd~~~~~~~~~~----------------------------~~~~ 267 (463)
T PLN02949 238 LW-------------------RI---PERIKRVYPPCDTSGLQALPLE----------------------------RSED 267 (463)
T ss_pred Hc-------------------CC---CCCeEEEcCCCCHHHcccCCcc----------------------------ccCC
Confidence 10 11 3478899999997665321100 0234
Q ss_pred CcEEEEEecCCCCCCHHHHHHHHHHhhc----cCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEcc
Q 003726 561 KPLIFSMARLDGVKNLTGLVECYGKSSK----LRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWIS 636 (800)
Q Consensus 561 k~iIl~vGRL~~~Kgl~~LleA~~~l~~----~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG 636 (800)
++.++++||+.+.||++.+++|++++.+ ..++++|+|+|++.. .+...+.++++++++++++.++|.|+|
T Consensus 268 ~~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG~~~~------~~~~~~~~eL~~la~~l~L~~~V~f~g 341 (463)
T PLN02949 268 PPYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFVGSCRN------KEDEERLQKLKDRAKELGLDGDVEFHK 341 (463)
T ss_pred CCEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEEeCCCC------cccHHHHHHHHHHHHHcCCCCcEEEeC
Confidence 6789999999999999999999998754 246899999999854 122345678899999999999999999
Q ss_pred cccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcCccccc-ccccc---CceEEEECCCCHHHHHH
Q 003726 637 AQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPA-EIIEH---GVSGFHIDPYHPDQVAE 712 (800)
Q Consensus 637 ~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~~GG~~-EiI~d---g~~G~lv~p~d~e~lA~ 712 (800)
.++.+++..+++. ++++|+||..|+||++++||||||+|||+++.||+. |+|.+ |.+|++++ |++++|+
T Consensus 342 ----~v~~~el~~ll~~-a~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~~~g~tG~l~~--~~~~la~ 414 (463)
T PLN02949 342 ----NVSYRDLVRLLGG-AVAGLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDEDGQQTGFLAT--TVEEYAD 414 (463)
T ss_pred ----CCCHHHHHHHHHh-CcEEEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcceeeecCCCCcccccCC--CHHHHHH
Confidence 5667899999996 999999999999999999999999999999999985 77765 67899985 8999999
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003726 713 LMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLTLAGV 758 (800)
Q Consensus 713 aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 758 (800)
+|.++++ ++++.+++|+++|++++ ++|||+.++++++++++.
T Consensus 415 ai~~ll~---~~~~~r~~m~~~ar~~~-~~FS~e~~~~~~~~~i~~ 456 (463)
T PLN02949 415 AILEVLR---MRETERLEIAAAARKRA-NRFSEQRFNEDFKDAIRP 456 (463)
T ss_pred HHHHHHh---CCHHHHHHHHHHHHHHH-HHcCHHHHHHHHHHHHHH
Confidence 9988772 36888999999999998 779999999999998763
No 56
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=100.00 E-value=1.7e-31 Score=288.20 Aligned_cols=284 Identities=30% Similarity=0.448 Sum_probs=232.3
Q ss_pred CCCceEEEECCCCc-hHHHHHHHhcCCCeEEEEecCCccccCCCChhhHHhhhhhhccchhhhHHHHHhccCCEEEecCH
Q 003726 394 QGVPDLIIGNYSDG-NLVATLLSYKLGVTQCNIAHALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNNADFIITSTY 472 (800)
Q Consensus 394 ~~~PDIIh~h~~~~-~lva~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~ 472 (800)
..+||+||+++... ...+..+++..++|++.+.|+.......... .....+...++.+|.+++.|.
T Consensus 91 ~~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~-------------~~~~~~~~~~~~~d~ii~~s~ 157 (377)
T cd03798 91 RFRPDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRKR-------------LLRALLRRALRRADAVIAVSE 157 (377)
T ss_pred cCCCCEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcccCchh-------------hHHHHHHHHHhcCCeEEeCCH
Confidence 45999999987554 5667777788899999999986543322111 011234557889999999998
Q ss_pred HHHhhcccCccccccccccccccceeeeccCCCCCCceEEecCCCCCCCCCCCChHHHHHHHhhccccccccCCcccccc
Q 003726 473 QEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLYDPKQNDEH 552 (800)
Q Consensus 473 ~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~ 552 (800)
...+...+. + .+..++.++|||+|...+.+...... +.
T Consensus 158 ~~~~~~~~~--------------------~--~~~~~~~~i~~~~~~~~~~~~~~~~~--------------------~~ 195 (377)
T cd03798 158 ALADELKAL--------------------G--IDPEKVTVIPNGVDTERFSPADRAEA--------------------RK 195 (377)
T ss_pred HHHHHHHHh--------------------c--CCCCceEEcCCCcCcccCCCcchHHH--------------------Hh
Confidence 766521111 1 22678999999999998876543221 01
Q ss_pred ccccCCCCCcEEEEEecCCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcE
Q 003726 553 VGILNDRSKPLIFSMARLDGVKNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQF 632 (800)
Q Consensus 553 ~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V 632 (800)
.+. ..+++.++++|++.+.||++.+++++..+.+..++++|+++|.+.. .+.+.++++++++.++|
T Consensus 196 ~~~--~~~~~~i~~~g~~~~~k~~~~li~~~~~~~~~~~~~~l~i~g~~~~------------~~~~~~~~~~~~~~~~v 261 (377)
T cd03798 196 LGL--PEDKKVILFVGRLVPRKGIDYLIEALARLLKKRPDVHLVIVGDGPL------------REALEALAAELGLEDRV 261 (377)
T ss_pred ccC--CCCceEEEEeccCccccCHHHHHHHHHHHHhcCCCeEEEEEcCCcc------------hHHHHHHHHhcCCcceE
Confidence 122 4577899999999999999999999999987788999999999876 56777888889999999
Q ss_pred EEcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHH
Q 003726 633 RWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVAE 712 (800)
Q Consensus 633 ~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~~GG~~EiI~dg~~G~lv~p~d~e~lA~ 712 (800)
.+.| .++.+++..+++. ||++++|+..|++|++++|||+||+|||+++.|+..+++.++.+|+++++.|++++++
T Consensus 262 ~~~g----~~~~~~~~~~~~~-ad~~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~ 336 (377)
T cd03798 262 TFLG----AVPHEEVPAYYAA-ADVFVLPSLREGFGLVLLEAMACGLPVVATDVGGIPEIITDGENGLLVPPGDPEALAE 336 (377)
T ss_pred EEeC----CCCHHHHHHHHHh-cCeeecchhhccCChHHHHHHhcCCCEEEecCCChHHHhcCCcceeEECCCCHHHHHH
Confidence 9999 6677899999997 9999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003726 713 LMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLTLAG 757 (800)
Q Consensus 713 aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 757 (800)
+|.+++ .++.. +++.++++.+.++|||+.+++++.++++
T Consensus 337 ~i~~~~----~~~~~--~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 375 (377)
T cd03798 337 AILRLL----ADPWL--RLGRAARRRVAERFSWENVAERLLELYR 375 (377)
T ss_pred HHHHHh----cCcHH--HHhHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 997776 77776 7889999999999999999999999875
No 57
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=100.00 E-value=4.7e-32 Score=293.64 Aligned_cols=354 Identities=17% Similarity=0.203 Sum_probs=246.7
Q ss_pred EEEEEccCcCCCCccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCcccccceeecCC
Q 003726 269 NVVIVSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIQNQGLDVIPKILIVTRLIPDAKGTTCNQRLERISGT 348 (800)
Q Consensus 269 rI~ivs~hg~~~~~~~lg~p~tGG~~vyild~araL~~eLa~~L~~~GheV~~~i~VvTr~~p~~~g~~~~~~~e~~~g~ 348 (800)
||++++++..|. .+||.+.++. .|+++|+++||+|+ |++.......... . .
T Consensus 1 kIl~i~~~~~~~--------~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~~-~--------~ 51 (359)
T cd03823 1 RILVVNHLYPPR--------SVGGAEVVAH--------DLAEALAKRGHEVA----VLTAGEDPPRQDK-E--------V 51 (359)
T ss_pred CeeEEcccCCcc--------cccchHHHHH--------HHHHHHHhcCCceE----EEeCCCCCCCccc-c--------c
Confidence 689999776643 3699999999 56666788999999 8876532221110 0 0
Q ss_pred CCeEEEEecc--CCCCccccccccccCChhhHHHHHHHHHHHHHHHhCCCceEEEECCCCc-hHHHHHHHhcCCCeEEEE
Q 003726 349 EHTHILRVPF--RTENGILRKWISRFDVWPYLETFAEDASNEIAAELQGVPDLIIGNYSDG-NLVATLLSYKLGVTQCNI 425 (800)
Q Consensus 349 ~~v~I~rvp~--~~~~~~~~~~isr~~i~~yl~~f~~~~~~~ll~~~~~~PDIIh~h~~~~-~lva~lla~~~gip~v~t 425 (800)
.+..+...+. ........ .......+...........+++. .+||+||+|.+.. .......++..++|++.+
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~--~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~ 126 (359)
T cd03823 52 IGVVVYGRPIDEVLRSALPR---DLFHLSDYDNPAVVAEFARLLED--FRPDVVHFHHLQGLGVSILRAARDRGIPIVLT 126 (359)
T ss_pred ccceeeccccccccCCCchh---hhhHHHhccCHHHHHHHHHHHHH--cCCCEEEECCccchHHHHHHHHHhcCCCEEEE
Confidence 0112221110 00000000 00000001111112223333443 4899999998754 334445667788999999
Q ss_pred ecCCccccCCCChhhHHhhhhhhccchhhhHHHHHhccCCEEEecCHHHHhhcccCccccccccccccccceeeeccCCC
Q 003726 426 AHALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNNADFIITSTYQEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDV 505 (800)
Q Consensus 426 ~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v 505 (800)
.|+.+..... . .......|.++++|....+...+ .+..
T Consensus 127 ~hd~~~~~~~------~---------------~~~~~~~d~ii~~s~~~~~~~~~--------------------~~~~- 164 (359)
T cd03823 127 LHDYWLICPR------Q---------------GLFKKGGDAVIAPSRFLLDRYVA--------------------NGLF- 164 (359)
T ss_pred Eeeeeeecch------h---------------hhhccCCCEEEEeCHHHHHHHHH--------------------cCCC-
Confidence 9986432100 0 01122339999999866552111 1111
Q ss_pred CCCceEEecCCCCCCCCCCCChHHHHHHHhhccccccccCCccccccccccCCCCCcEEEEEecCCCCCCHHHHHHHHHH
Q 003726 506 FDPKFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLYDPKQNDEHVGILNDRSKPLIFSMARLDGVKNLTGLVECYGK 585 (800)
Q Consensus 506 ~~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~ 585 (800)
..++.+|+||+|...+.+... +. ..++++++++||+.+.||++.+++++.+
T Consensus 165 -~~~~~vi~n~~~~~~~~~~~~--------------------------~~--~~~~~~i~~~G~~~~~k~~~~li~~~~~ 215 (359)
T cd03823 165 -AEKISVIRNGIDLDRAKRPRR--------------------------AP--PGGRLRFGFIGQLTPHKGVDLLLEAFKR 215 (359)
T ss_pred -ccceEEecCCcChhhcccccc--------------------------CC--CCCceEEEEEecCccccCHHHHHHHHHH
Confidence 468999999999987765321 11 4567889999999999999999999999
Q ss_pred hhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEcccccCccChHHHHHHHHccCcEEEecCC-C
Q 003726 586 SSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISAQMNRVRNGELYRYIADTRGVFVQPAF-Y 664 (800)
Q Consensus 586 l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~-~ 664 (800)
+.+ ++++|+++|++.. ........ +..++|.++| .++.+++..+++. +|++++||. .
T Consensus 216 l~~--~~~~l~i~G~~~~------------~~~~~~~~---~~~~~v~~~g----~~~~~~~~~~~~~-ad~~i~ps~~~ 273 (359)
T cd03823 216 LPR--GDIELVIVGNGLE------------LEEESYEL---EGDPRVEFLG----AYPQEEIDDFYAE-IDVLVVPSIWP 273 (359)
T ss_pred HHh--cCcEEEEEcCchh------------hhHHHHhh---cCCCeEEEeC----CCCHHHHHHHHHh-CCEEEEcCccc
Confidence 876 7899999999876 11111111 5568999999 5667899999996 999999998 7
Q ss_pred CCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCC
Q 003726 665 EAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYT 744 (800)
Q Consensus 665 E~fGl~vlEAMA~GlPVIAT~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ys 744 (800)
|+||++++|||+||+|||+|+.||..|++.++.+|++++++|.++++++|.+++ +|++.+++|+++++++..
T Consensus 274 e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~~---- 345 (359)
T cd03823 274 ENFPLVIREALAAGVPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAALERLI----DDPDLLERLRAGIEPPRS---- 345 (359)
T ss_pred CCCChHHHHHHHCCCCEEECCCCCHHHHhcCCCcEEEECCCCHHHHHHHHHHHH----hChHHHHHHHHhHHHhhh----
Confidence 999999999999999999999999999999999999999999999999997776 799999999999988763
Q ss_pred HHHHHHHHHHHHH
Q 003726 745 WKIYSERLLTLAG 757 (800)
Q Consensus 745 w~~~a~~ll~ly~ 757 (800)
.+.++++++++|+
T Consensus 346 ~~~~~~~~~~~~~ 358 (359)
T cd03823 346 IEDQAEEYLKLYR 358 (359)
T ss_pred HHHHHHHHHHHhh
Confidence 3999999999875
No 58
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=100.00 E-value=1.6e-32 Score=308.60 Aligned_cols=283 Identities=14% Similarity=0.141 Sum_probs=205.6
Q ss_pred CCCceEEEECCCCchHHHHHHH-hcCCCeEEEEecCCccccCCCC---hhhHHhhhhhhcc--chhhhHHHHHhccCCEE
Q 003726 394 QGVPDLIIGNYSDGNLVATLLS-YKLGVTQCNIAHALEKTKYPDS---DLYWRKFEEKYHF--SSQFTADLTAMNNADFI 467 (800)
Q Consensus 394 ~~~PDIIh~h~~~~~lva~lla-~~~gip~v~t~H~l~~~~~~~s---~~~~~~~~~~y~f--~~~~~~e~~a~~~AD~I 467 (800)
..++|+||++++..+ ..+. +..++|.+++.|+++...+... ...... ..|+. ......|+..++.+|.|
T Consensus 102 ~~~~D~v~~~~~~~~---~~~~~~~~~~p~i~~~~d~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~e~~~~~~ad~v 176 (397)
T TIGR03087 102 AEPVDAIVVFSSAMA---QYVTPHVRGVPRIVDFVDVDSDKWLQYARTKRWPLR--WIYRREGRLLLAYERAIAARFDAA 176 (397)
T ss_pred hCCCCEEEEeccccc---eeccccccCCCeEeehhhHHHHHHHHHHhccCcchh--HHHHHHHHHHHHHHHHHHhhCCeE
Confidence 358999999875442 2222 3568999999998643221100 000000 00110 00112577889999999
Q ss_pred EecCHHHHhhcccCccccccccccccccceeeeccCCCCCCceEEecCCCCCCCCCCCChHHHHHHHhhccccccccCCc
Q 003726 468 ITSTYQEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLYDPK 547 (800)
Q Consensus 468 It~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~ 547 (800)
+++|+.+.+..++. .+. ...++.|||||+|.+.|.|.....
T Consensus 177 i~~S~~~~~~l~~~-------------------~~~--~~~~v~vipngvd~~~f~~~~~~~------------------ 217 (397)
T TIGR03087 177 TFVSRAEAELFRRL-------------------APE--AAGRITAFPNGVDADFFSPDRDYP------------------ 217 (397)
T ss_pred EEcCHHHHHHHHHh-------------------CCC--CCCCeEEeecccchhhcCCCcccc------------------
Confidence 99999876632111 011 146899999999999886643210
Q ss_pred cccccccccCCCCCcEEEEEecCCCCCCHHHHH----HHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHH
Q 003726 548 QNDEHVGILNDRSKPLIFSMARLDGVKNLTGLV----ECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLI 623 (800)
Q Consensus 548 ~~~~~~Gll~~~~k~iIl~vGRL~~~Kgl~~Ll----eA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li 623 (800)
... .+++++|+|+||++..||++.++ +++..+.+..|+++|+|+|+++. +.+
T Consensus 218 -----~~~--~~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~l~ivG~g~~-------------~~~---- 273 (397)
T TIGR03087 218 -----NPY--PPGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAEFYIVGAKPS-------------PAV---- 273 (397)
T ss_pred -----CCC--CCCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcEEEEECCCCh-------------HHH----
Confidence 011 24567899999999999999988 55666666678999999999875 122
Q ss_pred HHcCCCCcEEEcccccCccChHHHHHHHHccCcEEEecCC-CCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEE
Q 003726 624 KQYNLHGQFRWISAQMNRVRNGELYRYIADTRGVFVQPAF-YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHI 702 (800)
Q Consensus 624 ~~~gL~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~-~E~fGl~vlEAMA~GlPVIAT~~GG~~EiI~dg~~G~lv 702 (800)
++++..++|.|+|.++ ++..+++. +|++|+||. .|++|++++||||||+|||+|+.|+. .+...+++|+++
T Consensus 274 ~~l~~~~~V~~~G~v~------~~~~~~~~-adv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~-~i~~~~~~g~lv 345 (397)
T TIGR03087 274 RALAALPGVTVTGSVA------DVRPYLAH-AAVAVAPLRIARGIQNKVLEAMAMAKPVVASPEAAE-GIDALPGAELLV 345 (397)
T ss_pred HHhccCCCeEEeeecC------CHHHHHHh-CCEEEecccccCCcccHHHHHHHcCCCEEecCcccc-cccccCCcceEe
Confidence 3334457899999543 57788886 999999997 59999999999999999999987543 334445689999
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003726 703 DPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLTLAG 757 (800)
Q Consensus 703 ~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 757 (800)
+ +|++++|++|.+++ +|++.+++|+++|++++.++|||+.+++++.+++.
T Consensus 346 ~-~~~~~la~ai~~ll----~~~~~~~~~~~~ar~~v~~~fsw~~~~~~~~~~l~ 395 (397)
T TIGR03087 346 A-ADPADFAAAILALL----ANPAEREELGQAARRRVLQHYHWPRNLARLDALLE 395 (397)
T ss_pred C-CCHHHHHHHHHHHH----cCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhc
Confidence 6 89999999997766 89999999999999999999999999999999874
No 59
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=100.00 E-value=2.7e-31 Score=284.48 Aligned_cols=351 Identities=19% Similarity=0.241 Sum_probs=250.4
Q ss_pred EEEEEccCcCCCCccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCcccccceeecCC
Q 003726 269 NVVIVSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIQNQGLDVIPKILIVTRLIPDAKGTTCNQRLERISGT 348 (800)
Q Consensus 269 rI~ivs~hg~~~~~~~lg~p~tGG~~vyild~araL~~eLa~~L~~~GheV~~~i~VvTr~~p~~~g~~~~~~~e~~~g~ 348 (800)
||+++++... .||...++. .|++.|.+.||+|. +++............ ...
T Consensus 1 kIl~~~~~~~-----------~gG~~~~~~--------~l~~~l~~~g~~v~----v~~~~~~~~~~~~~~------~~~ 51 (353)
T cd03811 1 KILFVIPSLG-----------GGGAERVLL--------NLANGLDKRGYDVT----LVVLRDEGDYLELLP------SNV 51 (353)
T ss_pred CeEEEeeccc-----------CCCcchhHH--------HHHHHHHhcCceEE----EEEcCCCCccccccc------cch
Confidence 6888886553 489999999 66667789999999 887653322110000 000
Q ss_pred CCeEEEEeccCCCCccccccccccCChhhHHHHHHHHHHHHHHHhCCCceEEEECCC-CchHHHHHHHhcCCCeEEEEec
Q 003726 349 EHTHILRVPFRTENGILRKWISRFDVWPYLETFAEDASNEIAAELQGVPDLIIGNYS-DGNLVATLLSYKLGVTQCNIAH 427 (800)
Q Consensus 349 ~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~ll~~~~~~PDIIh~h~~-~~~lva~lla~~~gip~v~t~H 427 (800)
........... ....+ .+ ......+++. .+||+||++.. ...+.+.+..+. ++|.+.+.|
T Consensus 52 ~~~~~~~~~~~-----------~~~~~----~~-~~~~~~~~~~--~~~dii~~~~~~~~~~~~~~~~~~-~~~~i~~~~ 112 (353)
T cd03811 52 KLIPVRVLKLK-----------SLRDL----LA-ILRLRRLLRK--EKPDVVISHLTTTPNVLALLAARL-GTKLIVWEH 112 (353)
T ss_pred hhhceeeeecc-----------cccch----hH-HHHHHHHHHh--cCCCEEEEcCccchhHHHHHHhhc-CCceEEEEc
Confidence 00000000000 00111 11 1122333333 38999999998 555555555554 899999999
Q ss_pred CCccccCCCChhhHHhhhhhhccchhhhHHHHHhccCCEEEecCHHHHhhcccCccccccccccccccceeeeccCCCCC
Q 003726 428 ALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNNADFIITSTYQEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFD 507 (800)
Q Consensus 428 ~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~ 507 (800)
+............+ ..+...++.+|.+++.|....+..... .+. ..
T Consensus 113 ~~~~~~~~~~~~~~-------------~~~~~~~~~~d~ii~~s~~~~~~~~~~-------------------~~~--~~ 158 (353)
T cd03811 113 NSLSLELKRKLRLL-------------LLIRKLYRRADKIVAVSEGVKEDLLKL-------------------LGI--PP 158 (353)
T ss_pred CcchhhhccchhHH-------------HHHHhhccccceEEEeccchhhhHHHh-------------------hcC--Cc
Confidence 97543321111000 234568899999999998655421111 111 14
Q ss_pred CceEEecCCCCCCCCCCCChHHHHHHHhhccccccccCCccccccccccCCCCCcEEEEEecCCCCCCHHHHHHHHHHhh
Q 003726 508 PKFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLYDPKQNDEHVGILNDRSKPLIFSMARLDGVKNLTGLVECYGKSS 587 (800)
Q Consensus 508 ~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~l~ 587 (800)
.++.+||||+|...+.+...... ..+. ..++++++++||+.+.||++.+++++.++.
T Consensus 159 ~~~~vi~~~~~~~~~~~~~~~~~---------------------~~~~--~~~~~~i~~~g~~~~~k~~~~~i~~~~~l~ 215 (353)
T cd03811 159 DKIEVIYNPIDIEEIRALAEEPL---------------------ELGI--PPDGPVILAVGRLSPQKGFDTLIRAFALLR 215 (353)
T ss_pred cccEEecCCcChhhcCcccchhh---------------------hcCC--CCCceEEEEEecchhhcChHHHHHHHHHhh
Confidence 68999999999988766433210 0122 467789999999999999999999999998
Q ss_pred ccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEcccccCccChHHHHHHHHccCcEEEecCCCCCC
Q 003726 588 KLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAF 667 (800)
Q Consensus 588 ~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~f 667 (800)
+..++++|+++|+++. .+.+.++++++++.++|.|.|.. +++..+++. +|++++||.+|++
T Consensus 216 ~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-~d~~i~ps~~e~~ 276 (353)
T cd03811 216 KEGPDARLVILGDGPL------------REELEALAKELGLADRVHFLGFQ------SNPYPYLKA-ADLFVLSSRYEGF 276 (353)
T ss_pred hcCCCceEEEEcCCcc------------HHHHHHHHHhcCCCccEEEeccc------CCHHHHHHh-CCEEEeCcccCCC
Confidence 8778999999999877 56677889999999999999953 357778886 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCC
Q 003726 668 GLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYT 744 (800)
Q Consensus 668 Gl~vlEAMA~GlPVIAT~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ys 744 (800)
|++++|||+||+|||+|+.||..|++.++.+|+++++.|.+++++.+.. +..+..+++.+++++.++++.+.++|+
T Consensus 277 ~~~~~Ea~~~G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (353)
T cd03811 277 PNVLLEAMALGTPVVATDCPGPREILEDGENGLLVPVGDEAALAAAALA-LLDLLLDPELRERLAAAARERVAREYS 352 (353)
T ss_pred CcHHHHHHHhCCCEEEcCCCChHHHhcCCCceEEECCCCHHHHHHHHHH-HHhccCChHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999644433 356668999999999999999988886
No 60
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=100.00 E-value=4.9e-31 Score=304.37 Aligned_cols=279 Identities=21% Similarity=0.275 Sum_probs=211.2
Q ss_pred CCCceEEEECCCCchHHHHHHHhcCCCeEEEEecCCccccCCCC--hhhHHhhhhhhccchhhhHHHHHhccCCEEEecC
Q 003726 394 QGVPDLIIGNYSDGNLVATLLSYKLGVTQCNIAHALEKTKYPDS--DLYWRKFEEKYHFSSQFTADLTAMNNADFIITST 471 (800)
Q Consensus 394 ~~~PDIIh~h~~~~~lva~lla~~~gip~v~t~H~l~~~~~~~s--~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S 471 (800)
..++||+|++.+.....+ ++.....+|.+.++|+-+....... ...|... |.+ .....+.+|.||++|
T Consensus 209 ~~~~di~i~dr~~~~~~~-~~~~~~~~~~v~~lH~~h~~~~~~~~~~~~~~~~---y~~------~~~~~~~~D~iI~~S 278 (500)
T TIGR02918 209 LTKKDIIILDRSTGIGQA-VLENKGPAKLGVVVHAEHFSESATNETYILWNNY---YEY------QFSNADYIDFFITAT 278 (500)
T ss_pred CCCCCEEEEcCCcccchH-HHhcCCCceEEEEEChhhhcCccCcchhHHHHHH---HHH------HHhchhhCCEEEECC
Confidence 458999999876653333 4455668999999997432221111 1112211 110 122467889999999
Q ss_pred HHHHhhcccCccccccccccccccceeeeccCCCCCCceEEecCCCCCCCCCCCChHHHHHHHhhccccccccCCccccc
Q 003726 472 YQEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLYDPKQNDE 551 (800)
Q Consensus 472 ~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~ 551 (800)
+...+...+.+++| +. ..+++.+||||++...+.|..
T Consensus 279 ~~~~~~l~~~~~~~----------------~~--~~~ki~viP~g~~~~~~~~~~------------------------- 315 (500)
T TIGR02918 279 DIQNQILKNQFKKY----------------YN--IEPRIYTIPVGSLDELQYPEQ------------------------- 315 (500)
T ss_pred HHHHHHHHHHhhhh----------------cC--CCCcEEEEcCCCcccccCccc-------------------------
Confidence 87655333332222 11 156899999998765443210
Q ss_pred cccccCCCCCcEEEEEecCCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCc
Q 003726 552 HVGILNDRSKPLIFSMARLDGVKNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQ 631 (800)
Q Consensus 552 ~~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~ 631 (800)
...+..|+++||+.+.||++.|++|++++.+..|+++|+|+|+|+. .+.++++++++++.++
T Consensus 316 ------~r~~~~il~vGrl~~~Kg~~~li~A~~~l~~~~p~~~l~i~G~G~~------------~~~l~~~i~~~~l~~~ 377 (500)
T TIGR02918 316 ------ERKPFSIITASRLAKEKHIDWLVKAVVKAKKSVPELTFDIYGEGGE------------KQKLQKIINENQAQDY 377 (500)
T ss_pred ------ccCCeEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEECchh------------HHHHHHHHHHcCCCCe
Confidence 2344679999999999999999999999988889999999999976 5788999999999999
Q ss_pred EEEcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcCcc-ccccccccCceEEEECC----CC
Q 003726 632 FRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATCHG-GPAEIIEHGVSGFHIDP----YH 706 (800)
Q Consensus 632 V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~~G-G~~EiI~dg~~G~lv~p----~d 706 (800)
|.|+|. . ++..+++. +|+||+||..|+||++++||||||+|||+|+.+ |++|+|++|.+|+++++ +|
T Consensus 378 V~f~G~----~---~~~~~~~~-adv~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~G~~eiI~~g~nG~lv~~~~~~~d 449 (500)
T TIGR02918 378 IHLKGH----R---NLSEVYKD-YELYLSASTSEGFGLTLMEAVGSGLGMIGFDVNYGNPTFIEDNKNGYLIPIDEEEDD 449 (500)
T ss_pred EEEcCC----C---CHHHHHHh-CCEEEEcCccccccHHHHHHHHhCCCEEEecCCCCCHHHccCCCCEEEEeCCccccc
Confidence 999993 2 35556665 999999999999999999999999999999986 89999999999999984 33
Q ss_pred ----HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003726 707 ----PDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLTLAG 757 (800)
Q Consensus 707 ----~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 757 (800)
++++|++|.+++ + ++.+++|+++|++.+ ++|||+.++++|.++++
T Consensus 450 ~~~~~~~la~~I~~ll----~-~~~~~~~~~~a~~~a-~~fs~~~v~~~w~~ll~ 498 (500)
T TIGR02918 450 EDQIITALAEKIVEYF----N-SNDIDAFHEYSYQIA-EGFLTANIIEKWKKLVR 498 (500)
T ss_pred hhHHHHHHHHHHHHHh----C-hHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHh
Confidence 777888886654 4 556899999999976 89999999999998875
No 61
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=8.2e-31 Score=297.10 Aligned_cols=438 Identities=19% Similarity=0.197 Sum_probs=299.4
Q ss_pred eEEEEEccCcCCCCccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCcccccceee--
Q 003726 268 FNVVIVSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIQNQGLDVIPKILIVTRLIPDAKGTTCNQRLERI-- 345 (800)
Q Consensus 268 ~rI~ivs~hg~~~~~~~lg~p~tGG~~vyild~araL~~eLa~~L~~~GheV~~~i~VvTr~~p~~~g~~~~~~~e~~-- 345 (800)
|||+++|...+|- -++||....+- .|.+.|++.|++|. |+...++.. ...+....+.+
T Consensus 1 M~Il~v~~E~~p~-------vK~GGLaDv~~--------alpk~L~~~g~~v~----v~lP~y~~~-~~~~~~~~~~~~~ 60 (487)
T COG0297 1 MKILFVASEIFPF-------VKTGGLADVVG--------ALPKALAKRGVDVR----VLLPSYPKV-QKEWRDLLKVVGK 60 (487)
T ss_pred CcceeeeeeecCc-------cccCcHHHHHH--------HhHHHHHhcCCeEE----EEcCCchhh-hhhhccccceeeE
Confidence 7899999888764 47999999999 45555689999999 988887732 22222211111
Q ss_pred ----c-CCCCeEEEEeccCC--CCc-c--cccccccc--CChhh---HHHHH--HHHHHHHHHHhC--CCceEEEECCCC
Q 003726 346 ----S-GTEHTHILRVPFRT--ENG-I--LRKWISRF--DVWPY---LETFA--EDASNEIAAELQ--GVPDLIIGNYSD 406 (800)
Q Consensus 346 ----~-g~~~v~I~rvp~~~--~~~-~--~~~~isr~--~i~~y---l~~f~--~~~~~~ll~~~~--~~PDIIh~h~~~ 406 (800)
. +.....+....... .+. + .....+|. ..+.+ ..+|+ ..+..++..... ..|||||+|+|+
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~v~~~lid~~~~f~r~~~~~~~~~d~~~Rf~~F~~a~~~~~~~~~~~~~pDIvH~hDWq 140 (487)
T COG0297 61 FGVLKGGRAQLFIVKEYGKDGGVDLYLIDNPALFKRPDSTLYGYYDNAERFAFFSLAAAELAPLGLISWLPDIVHAHDWQ 140 (487)
T ss_pred eeeeecccceEEEEEeecccCCCcEEEecChhhcCccccccCCCCcHHHHHHHHHHHHHHHhhhcCCCCCCCEEEeecHH
Confidence 0 00001111111100 000 0 11223331 22222 23333 334444443333 479999999999
Q ss_pred chHHHHHHHhc----CCCeEEEEecCCccccCCC-ChhhHHhhh-hhhc-----cchhhhHHHHHhccCCEEEecCHHHH
Q 003726 407 GNLVATLLSYK----LGVTQCNIAHALEKTKYPD-SDLYWRKFE-EKYH-----FSSQFTADLTAMNNADFIITSTYQEI 475 (800)
Q Consensus 407 ~~lva~lla~~----~gip~v~t~H~l~~~~~~~-s~~~~~~~~-~~y~-----f~~~~~~e~~a~~~AD~IIt~S~~ei 475 (800)
+++++.+++.. ..+|.|+|+|++....... .-..+-.+. ..|+ +.-+....+..+..||.|.|+|+..+
T Consensus 141 t~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~ad~vttVSptYa 220 (487)
T COG0297 141 TGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEFYGQISFLKGGLYYADAVTTVSPTYA 220 (487)
T ss_pred HHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhceeeecCcchhhhhhheeccEEEEECHHHH
Confidence 99999999984 4699999999975544322 111111111 1111 11233445678899999999999665
Q ss_pred hhcccCccccccccccccccceeeeccCCCCCCceEEecCCCCCCCCCCCChHHHHHHHhhccccccccCCccccccccc
Q 003726 476 AGSKNNVGQYENHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLYDPKQNDEHVGI 555 (800)
Q Consensus 476 ~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~Gl 555 (800)
..... ...+.++-++.+.. ..++.-|-||+|.+.+.|.++.-....--.........++..+++++|+
T Consensus 221 ~Ei~t------~~~g~gl~g~l~~~------~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~~L~~~~gL 288 (487)
T COG0297 221 GEIYT------PEYGEGLEGLLSWR------SGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKVALQERLGL 288 (487)
T ss_pred Hhhcc------ccccccchhhhhhc------cccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHHHHHHHhCC
Confidence 53221 11122233332221 2468889999999999887654221000001111233455677788999
Q ss_pred cCCCCCcEEEEEecCCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEc
Q 003726 556 LNDRSKPLIFSMARLDGVKNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWI 635 (800)
Q Consensus 556 l~~~~k~iIl~vGRL~~~Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~fl 635 (800)
..+.+.|++.++||++.+||++.+++++..+.+.. ++||+.|.|.. ...+.+..+++++. +++...
T Consensus 289 ~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~--~~~vilG~gd~----------~le~~~~~la~~~~--~~~~~~ 354 (487)
T COG0297 289 DVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQG--WQLVLLGTGDP----------ELEEALRALASRHP--GRVLVV 354 (487)
T ss_pred CCCCCCcEEEEeeccccccchhHHHHHHHHHHHhC--ceEEEEecCcH----------HHHHHHHHHHHhcC--ceEEEE
Confidence 76778899999999999999999999999998764 99999999943 56788889999886 355444
Q ss_pred ccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcCcccccccccc--------CceEEEECCCCH
Q 003726 636 SAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH--------GVSGFHIDPYHP 707 (800)
Q Consensus 636 G~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~~GG~~EiI~d--------g~~G~lv~p~d~ 707 (800)
- --+..+++.+.+++|++++||++|+||++-++||..|+++|+...||.++.|.+ ..+||.+.+.++
T Consensus 355 i-----~~~~~la~~i~agaD~~lmPSrfEPcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f~~~~~ 429 (487)
T COG0297 355 I-----GYDEPLAHLIYAGADVILMPSRFEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLFLQTNP 429 (487)
T ss_pred e-----eecHHHHHHHHhcCCEEEeCCcCcCCcHHHHHHHHcCCcceEcccCCccceecCccchhccCceeEEEEecCCH
Confidence 2 224677777777899999999999999999999999999999999999999986 579999999999
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 003726 708 DQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLTLAGVY 759 (800)
Q Consensus 708 e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~~ 759 (800)
++++.+|.+++.....++..|+.+..+++. ..|+|+..+++|.++|+..
T Consensus 430 ~~l~~al~rA~~~y~~~~~~w~~~~~~~m~---~d~sw~~sa~~y~~lY~~~ 478 (487)
T COG0297 430 DHLANALRRALVLYRAPPLLWRKVQPNAMG---ADFSWDLSAKEYVELYKPL 478 (487)
T ss_pred HHHHHHHHHHHHHhhCCHHHHHHHHHhhcc---cccCchhHHHHHHHHHHHH
Confidence 999999999988777777779999999987 6899999999999999854
No 62
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=99.98 E-value=1e-30 Score=295.58 Aligned_cols=276 Identities=16% Similarity=0.237 Sum_probs=218.7
Q ss_pred CCCceEEEECCCCc-hHHHHHHHhcCCCe-EEEEecCCccccCCCChhhHHhhhhhhccchhhhHHHHHhccCCEEEecC
Q 003726 394 QGVPDLIIGNYSDG-NLVATLLSYKLGVT-QCNIAHALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNNADFIITST 471 (800)
Q Consensus 394 ~~~PDIIh~h~~~~-~lva~lla~~~gip-~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S 471 (800)
..++|++|+++... +..+.++.++.+.+ ++.++|+..... ......+. ......++.+|.||++|
T Consensus 125 ~~~~~v~~sy~~~~~~~~~~~l~~~~~~~~~i~~~Hg~d~~~--------~~~~~~~~-----~~~~~~~~~~d~ii~~S 191 (407)
T cd04946 125 DGQGTVFYSYWLHETAYALALLKKEYLRKRVISRAHGYDLYE--------DRYPSGYI-----PLRRYLLSSLDAVFPCS 191 (407)
T ss_pred ccCceEEEEecCchHHHHHHHHHHhcCCceEEEEeccchhhh--------hhccccch-----HHHHHHHhcCCEEEECC
Confidence 46788999865544 45555677777765 899999753211 00001111 11234678999999999
Q ss_pred HHHHhhcccCccccccccccccccceeeeccCCCCCCceEEecCCCCCCCCCCCChHHHHHHHhhccccccccCCccccc
Q 003726 472 YQEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLYDPKQNDE 551 (800)
Q Consensus 472 ~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~ 551 (800)
....+..++.. +....++.+++||+|...+.+..
T Consensus 192 ~~~~~~l~~~~---------------------~~~~~ki~vi~~gv~~~~~~~~~------------------------- 225 (407)
T cd04946 192 EQGRNYLQKRY---------------------PAYKEKIKVSYLGVSDPGIISKP------------------------- 225 (407)
T ss_pred HHHHHHHHHHC---------------------CCccccEEEEECCcccccccCCC-------------------------
Confidence 97766332221 12256899999999987664321
Q ss_pred cccccCCCCCcEEEEEecCCCCCCHHHHHHHHHHhhccCC--CeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCC
Q 003726 552 HVGILNDRSKPLIFSMARLDGVKNLTGLVECYGKSSKLRE--LVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLH 629 (800)
Q Consensus 552 ~~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~l~~~~~--~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~ 629 (800)
..++++.|+++||+.+.||++.+++|+.++.+.+| ++.++++|+|+. .+.+++++++.++.
T Consensus 226 -----~~~~~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~~l~~~iiG~g~~------------~~~l~~~~~~~~~~ 288 (407)
T cd04946 226 -----SKDDTLRIVSCSYLVPVKRVDLIIKALAALAKARPSIKIKWTHIGGGPL------------EDTLKELAESKPEN 288 (407)
T ss_pred -----CCCCCEEEEEeeccccccCHHHHHHHHHHHHHhCCCceEEEEEEeCchH------------HHHHHHHHHhcCCC
Confidence 03456789999999999999999999999988765 467788999876 56788888888888
Q ss_pred CcEEEcccccCccChHHHHHHHHc-cCcEEEecCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCC-CH
Q 003726 630 GQFRWISAQMNRVRNGELYRYIAD-TRGVFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPY-HP 707 (800)
Q Consensus 630 ~~V~flG~~~~~v~~~el~~~ia~-aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~~GG~~EiI~dg~~G~lv~p~-d~ 707 (800)
++|.|+| .++.+++..+++. .+|+|+.||..|++|++++||||||+|||||+.||..|+|.++.+|+++++. |+
T Consensus 289 ~~V~f~G----~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg~~e~i~~~~~G~l~~~~~~~ 364 (407)
T cd04946 289 ISVNFTG----ELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGGTPEIVDNGGNGLLLSKDPTP 364 (407)
T ss_pred ceEEEec----CCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCCcHHHhcCCCcEEEeCCCCCH
Confidence 9999999 5667899999874 3789999999999999999999999999999999999999999999999875 89
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 003726 708 DQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLL 753 (800)
Q Consensus 708 e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll 753 (800)
++++++|.+++ +||+.+++|+++|++++.++|||+...+++.
T Consensus 365 ~~la~~I~~ll----~~~~~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 365 NELVSSLSKFI----DNEEEYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred HHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 99999997776 7999999999999999999999999988875
No 63
>PLN02275 transferase, transferring glycosyl groups
Probab=99.97 E-value=1.4e-29 Score=282.79 Aligned_cols=317 Identities=14% Similarity=0.058 Sum_probs=211.6
Q ss_pred HHHHHHHCCC-ccccceeEEeCCCCCCCCCcccccceeecCCCCeEEEEeccCCCCccccccccccCChh---hHHH---
Q 003726 308 MLLRIQNQGL-DVIPKILIVTRLIPDAKGTTCNQRLERISGTEHTHILRVPFRTENGILRKWISRFDVWP---YLET--- 380 (800)
Q Consensus 308 La~~L~~~Gh-eV~~~i~VvTr~~p~~~g~~~~~~~e~~~g~~~v~I~rvp~~~~~~~~~~~isr~~i~~---yl~~--- 380 (800)
++.+++++|+ +|+ |++...+ + .........+++|+|+|...... . .. .++. |+..
T Consensus 24 ~~~~l~~~~~~~v~----vi~~~~~---~-----~~~~~~~~~~v~v~r~~~~~~~~---~-~~--~~~~~~~~~~~~~~ 85 (371)
T PLN02275 24 HALSLARQASFQVD----VVAYGGS---E-----PIPALLNHPSIHIHLMVQPRLLQ---R-LP--RVLYALALLLKVAI 85 (371)
T ss_pred HHHHHHhcCCceEE----EEEecCC---C-----CCHHHhcCCcEEEEECCCccccc---c-cc--cchHHHHHHHHHHH
Confidence 5556688886 698 8864321 1 11112233479999998521110 0 11 1222 2211
Q ss_pred HHHHHHHHHHHHhCCCceEEEECCCCc---hHHHHHHHhcCCCeEEEEecCCccccCCCChhhHHhhhhhhccchhhhHH
Q 003726 381 FAEDASNEIAAELQGVPDLIIGNYSDG---NLVATLLSYKLGVTQCNIAHALEKTKYPDSDLYWRKFEEKYHFSSQFTAD 457 (800)
Q Consensus 381 f~~~~~~~ll~~~~~~PDIIh~h~~~~---~lva~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e 457 (800)
+.......+.. ...+||+||+|.+.. .+++.++++..++|++++.|+++......... .......+ ....+
T Consensus 86 ~~~~~~~~~~~-~~~~~DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~---~~~~~~~~--~~~~e 159 (371)
T PLN02275 86 QFLMLLWFLCV-KIPRPDVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYTLLALSLG---RSHPLVRL--YRWYE 159 (371)
T ss_pred HHHHHHHHHHh-hCCCCCEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHHHHhcccC---CCCHHHHH--HHHHH
Confidence 11111111111 246999999987553 45667778888999999999863211000000 00000011 11246
Q ss_pred HHHhccCCEEEecCHHHHhhcccCccccccccccccccceeeeccCCCCCCceEEecCCCCCCCCCCCChHHHHHHHhhc
Q 003726 458 LTAMNNADFIITSTYQEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSDKEKRLIALHG 537 (800)
Q Consensus 458 ~~a~~~AD~IIt~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~ 537 (800)
+..++.||.||++|+...+...+. .|++ +.+||||. .+.|.|.....
T Consensus 160 ~~~~~~ad~ii~~S~~~~~~l~~~-------------------~g~~-----i~vi~n~~-~~~f~~~~~~~-------- 206 (371)
T PLN02275 160 RHYGKMADGHLCVTKAMQHELDQN-------------------WGIR-----ATVLYDQP-PEFFRPASLEI-------- 206 (371)
T ss_pred HHHHhhCCEEEECCHHHHHHHHHh-------------------cCCC-----eEEECCCC-HHHcCcCCchh--------
Confidence 778999999999998765521110 1221 78999984 46665543210
Q ss_pred cccccccCCccccccccccCCCCCcEEEEEecCCCCCCHHHHHHHHHHhh-----------------ccCCCeEEEEEec
Q 003726 538 QIEDLLYDPKQNDEHVGILNDRSKPLIFSMARLDGVKNLTGLVECYGKSS-----------------KLRELVNLVVVGG 600 (800)
Q Consensus 538 ~~~~~l~~~~~~~~~~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~l~-----------------~~~~~v~LvIVG~ 600 (800)
... .+...+++++||+.+.||++.+++|+..+. +..++++|+|+|+
T Consensus 207 --------------~~~---~~~~~~i~~~grl~~~k~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~i~l~ivG~ 269 (371)
T PLN02275 207 --------------RLR---PNRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAARLNESDSASGKQSLYPRLLFIITGK 269 (371)
T ss_pred --------------ccc---CCCcEEEEEeCceeccCCHHHHHHHHHHHHhhhhhccccccccccccccCCCeEEEEEeC
Confidence 000 223457889999999999999999998873 2357899999999
Q ss_pred cCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEcccccCccChHHHHHHHHccCcEEEecC---CCCCCcHHHHHHHHc
Q 003726 601 YMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISAQMNRVRNGELYRYIADTRGVFVQPA---FYEAFGLTVVEAMTC 677 (800)
Q Consensus 601 g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS---~~E~fGl~vlEAMA~ 677 (800)
|+. .++++++++++++++ |.|.+ ..++.+++..+|+. +|++|.|+ ..|+||++++|||||
T Consensus 270 G~~------------~~~l~~~~~~~~l~~-v~~~~---~~~~~~~~~~~l~~-aDv~v~~~~s~~~e~~p~~llEAmA~ 332 (371)
T PLN02275 270 GPQ------------KAMYEEKISRLNLRH-VAFRT---MWLEAEDYPLLLGS-ADLGVSLHTSSSGLDLPMKVVDMFGC 332 (371)
T ss_pred CCC------------HHHHHHHHHHcCCCc-eEEEc---CCCCHHHHHHHHHh-CCEEEEeccccccccccHHHHHHHHC
Confidence 988 678999999999976 88765 14567899999996 99999863 248999999999999
Q ss_pred CCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHH
Q 003726 678 GLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVAELMIEF 717 (800)
Q Consensus 678 GlPVIAT~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~ 717 (800)
|+|||+|+.||..|+|+++.+|++++ |++++|++|.++
T Consensus 333 G~PVVa~~~gg~~eiv~~g~~G~lv~--~~~~la~~i~~l 370 (371)
T PLN02275 333 GLPVCAVSYSCIGELVKDGKNGLLFS--SSSELADQLLEL 370 (371)
T ss_pred CCCEEEecCCChHHHccCCCCeEEEC--CHHHHHHHHHHh
Confidence 99999999999999999999999997 699999998654
No 64
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=99.97 E-value=7.5e-30 Score=281.01 Aligned_cols=264 Identities=19% Similarity=0.262 Sum_probs=191.6
Q ss_pred CCCceEEEECCCCchHHHHHHHhcCCCeEEEEecCCccccCCCChhhH------HhhhhhhccchhhhHHHHHhccCCEE
Q 003726 394 QGVPDLIIGNYSDGNLVATLLSYKLGVTQCNIAHALEKTKYPDSDLYW------RKFEEKYHFSSQFTADLTAMNNADFI 467 (800)
Q Consensus 394 ~~~PDIIh~h~~~~~lva~lla~~~gip~v~t~H~l~~~~~~~s~~~~------~~~~~~y~f~~~~~~e~~a~~~AD~I 467 (800)
..++|+||++.+.... .+....++|.+..+|+.....+...+.+. ......+........+...++++|.|
T Consensus 81 ~~~~D~v~~~~~~~~~---~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i 157 (351)
T cd03804 81 LSGYDLVISSSHAVAK---GVITRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRIWDRRSAARVDYF 157 (351)
T ss_pred ccCCCEEEEcCcHHhc---cccCCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHHHHHHHhcCCCEE
Confidence 4589999987643222 22255678888888873221111110000 00000001111112456678999999
Q ss_pred EecCHHHHhhcccCccccccccccccccceeeeccCCCCCCceEEecCCCCCCCCCCCChHHHHHHHhhccccccccCCc
Q 003726 468 ITSTYQEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLYDPK 547 (800)
Q Consensus 468 It~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~ 547 (800)
+++|....+..++. +..+..+|+||+|.+.|.+..
T Consensus 158 i~~S~~~~~~~~~~------------------------~~~~~~vi~~~~d~~~~~~~~--------------------- 192 (351)
T cd03804 158 IANSRFVARRIKKY------------------------YGRDATVIYPPVDTDRFTPAE--------------------- 192 (351)
T ss_pred EECCHHHHHHHHHH------------------------hCCCcEEECCCCCHhhcCcCC---------------------
Confidence 99999766532111 133568999999988775431
Q ss_pred cccccccccCCCCCcEEEEEecCCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcC
Q 003726 548 QNDEHVGILNDRSKPLIFSMARLDGVKNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYN 627 (800)
Q Consensus 548 ~~~~~~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~g 627 (800)
..++.++++||+.+.||++.+++|+.+++ ++|+|+|+|+. .+.+++ +
T Consensus 193 -----------~~~~~il~~G~~~~~K~~~~li~a~~~~~-----~~l~ivG~g~~------------~~~l~~-----~ 239 (351)
T cd03804 193 -----------EKEDYYLSVGRLVPYKRIDLAIEAFNKLG-----KRLVVIGDGPE------------LDRLRA-----K 239 (351)
T ss_pred -----------CCCCEEEEEEcCccccChHHHHHHHHHCC-----CcEEEEECChh------------HHHHHh-----h
Confidence 23457899999999999999999998763 78999999976 233333 4
Q ss_pred CCCcEEEcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCH
Q 003726 628 LHGQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHP 707 (800)
Q Consensus 628 L~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~~GG~~EiI~dg~~G~lv~p~d~ 707 (800)
+.++|.|+| .++.+++..+++. +|++++||. |+||++++|||+||+|||+++.||..|++.++.+|++++++|+
T Consensus 240 ~~~~V~~~g----~~~~~~~~~~~~~-ad~~v~ps~-e~~g~~~~Eama~G~Pvi~~~~~~~~e~i~~~~~G~~~~~~~~ 313 (351)
T cd03804 240 AGPNVTFLG----RVSDEELRDLYAR-ARAFLFPAE-EDFGIVPVEAMASGTPVIAYGKGGALETVIDGVTGILFEEQTV 313 (351)
T ss_pred cCCCEEEec----CCCHHHHHHHHHh-CCEEEECCc-CCCCchHHHHHHcCCCEEEeCCCCCcceeeCCCCEEEeCCCCH
Confidence 568999999 5677899999996 999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHH
Q 003726 708 DQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERL 752 (800)
Q Consensus 708 e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~l 752 (800)
++++++|..++ +|++ .+.+++++++ ++|+|+.+.+++
T Consensus 314 ~~la~~i~~l~----~~~~---~~~~~~~~~~-~~~~~~~~~~~~ 350 (351)
T cd03804 314 ESLAAAVERFE----KNED---FDPQAIRAHA-ERFSESRFREKI 350 (351)
T ss_pred HHHHHHHHHHH----hCcc---cCHHHHHHHH-HhcCHHHHHHHh
Confidence 99999997776 6763 2344455555 579999998875
No 65
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=99.97 E-value=2.7e-29 Score=278.56 Aligned_cols=273 Identities=24% Similarity=0.303 Sum_probs=213.3
Q ss_pred CCceEEEECCCCchHHHHHHHhcCCCeEEEEecCCccccCCCC-hhhHHhhhhhhccchhhhHHHHHhccCCEEEecCHH
Q 003726 395 GVPDLIIGNYSDGNLVATLLSYKLGVTQCNIAHALEKTKYPDS-DLYWRKFEEKYHFSSQFTADLTAMNNADFIITSTYQ 473 (800)
Q Consensus 395 ~~PDIIh~h~~~~~lva~lla~~~gip~v~t~H~l~~~~~~~s-~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 473 (800)
.++|+||++....... .++......+.+.++|+......... ...|+.. +. .....++.+|.||++|+.
T Consensus 98 ~~~diii~~~~~~~~~-~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~---~~------~~~~~~~~~d~ii~~s~~ 167 (372)
T cd04949 98 TKPDVFILDRPTLDGQ-ALLNMKKAAKVVVVLHSNHVSDNNDPVHSLINNF---YE------YVFENLDKVDGVIVATEQ 167 (372)
T ss_pred CCCCEEEECCccccch-hHHhccCCceEEEEEChHHhCCcccccccccchh---hH------HHHhChhhCCEEEEccHH
Confidence 5899999988775443 33444455677889997543221110 0111111 11 112246789999999987
Q ss_pred HHhhcccCccccccccccccccceeeeccCCCCCCceEEecCCCCCCCCCCCChHHHHHHHhhccccccccCCccccccc
Q 003726 474 EIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLYDPKQNDEHV 553 (800)
Q Consensus 474 ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~ 553 (800)
..+...+.. +. ..++.+||||++...+.+...
T Consensus 168 ~~~~l~~~~-------------------~~---~~~v~~ip~g~~~~~~~~~~~-------------------------- 199 (372)
T cd04949 168 QKQDLQKQF-------------------GN---YNPIYTIPVGSIDPLKLPAQF-------------------------- 199 (372)
T ss_pred HHHHHHHHh-------------------CC---CCceEEEcccccChhhcccch--------------------------
Confidence 665322211 11 234889999999887765320
Q ss_pred cccCCCCCcEEEEEecCCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEE
Q 003726 554 GILNDRSKPLIFSMARLDGVKNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFR 633 (800)
Q Consensus 554 Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~ 633 (800)
....+..++++||+.+.||++.+++++.++....|+++|+|+|.|.. ...+.++++++++.++|.
T Consensus 200 ---~~~~~~~i~~vgrl~~~K~~~~li~a~~~l~~~~~~~~l~i~G~g~~------------~~~~~~~~~~~~~~~~v~ 264 (372)
T cd04949 200 ---KQRKPHKIITVARLAPEKQLDQLIKAFAKVVKQVPDATLDIYGYGDE------------EEKLKELIEELGLEDYVF 264 (372)
T ss_pred ---hhcCCCeEEEEEccCcccCHHHHHHHHHHHHHhCCCcEEEEEEeCch------------HHHHHHHHHHcCCcceEE
Confidence 03456689999999999999999999999988889999999999976 456777888999999999
Q ss_pred EcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcCcc-ccccccccCceEEEECCCCHHHHHH
Q 003726 634 WISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATCHG-GPAEIIEHGVSGFHIDPYHPDQVAE 712 (800)
Q Consensus 634 flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~~G-G~~EiI~dg~~G~lv~p~d~e~lA~ 712 (800)
|.|.. .++.++++. +|++|.||..|+||++++|||+||+|||+++.| |+.++|.++.+|++++++|++++++
T Consensus 265 ~~g~~------~~~~~~~~~-ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~g~~~~v~~~~~G~lv~~~d~~~la~ 337 (372)
T cd04949 265 LKGYT------RDLDEVYQK-AQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNYGPSEIIEDGENGYLVPKGDIEALAE 337 (372)
T ss_pred EcCCC------CCHHHHHhh-hhEEEecccccccChHHHHHHhCCCCEEEecCCCCcHHHcccCCCceEeCCCcHHHHHH
Confidence 99942 357888886 999999999999999999999999999999987 8999999999999999999999999
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHH
Q 003726 713 LMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERL 752 (800)
Q Consensus 713 aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~l 752 (800)
+|..++ .|++.+++|++++++. .++|||+.++++|
T Consensus 338 ~i~~ll----~~~~~~~~~~~~a~~~-~~~~s~~~~~~~w 372 (372)
T cd04949 338 AIIELL----NDPKLLQKFSEAAYEN-AERYSEENVWEKW 372 (372)
T ss_pred HHHHHH----cCHHHHHHHHHHHHHH-HHHhhHHHHHhcC
Confidence 997776 8999999999999999 5899999998864
No 66
>PLN02501 digalactosyldiacylglycerol synthase
Probab=99.97 E-value=9.9e-29 Score=283.41 Aligned_cols=274 Identities=11% Similarity=0.103 Sum_probs=196.0
Q ss_pred CCCceEEEECCCCc-hHH--HHHHHhcCCCeEEEEecCCccccCCCChhhHHhhhhhhccchhhhHHHHHh-ccCCEEEe
Q 003726 394 QGVPDLIIGNYSDG-NLV--ATLLSYKLGVTQCNIAHALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAM-NNADFIIT 469 (800)
Q Consensus 394 ~~~PDIIh~h~~~~-~lv--a~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~-~~AD~IIt 469 (800)
...|||||.+.+.. ++. |..+|++++ |+|.++|+-.......... ..... +..+ ....+.. .+||.|++
T Consensus 432 ~f~PDVVHLatP~~LGw~~~Glr~ArKl~-PVVasyHTny~eYl~~y~~---g~L~~--~llk-~l~~~v~r~hcD~VIa 504 (794)
T PLN02501 432 SKDADIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVHTNYLEYIKREKN---GALQA--FFVK-HINNWVTRAYCHKVLR 504 (794)
T ss_pred ccCCCEEEECCchhhccHHHHHHHHHHcC-CeEEEEeCCcHHHHhHhcc---hhHHH--HHHH-HHHHHHHHhhCCEEEc
Confidence 35899999998775 666 888999999 8999999864321110000 00000 0000 0011111 12899999
Q ss_pred cCHHHHhhcccCccccccccccccccceeeeccCCCCCCceEEecCCCCCCCCCCCChHHHHHHHhhccccccccCCccc
Q 003726 470 STYQEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLYDPKQN 549 (800)
Q Consensus 470 ~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~ 549 (800)
+|..... + + ...+..| ||||++.|.|......+
T Consensus 505 PS~atq~-------------------L-------~--~~vI~nV-nGVDte~F~P~~r~~~~------------------ 537 (794)
T PLN02501 505 LSAATQD-------------------L-------P--KSVICNV-HGVNPKFLKIGEKVAEE------------------ 537 (794)
T ss_pred CCHHHHH-------------------h-------c--ccceeec-ccccccccCCcchhHHH------------------
Confidence 9964432 0 0 1112222 69999999886543321
Q ss_pred cccccccCCCCCcEEEEEecCCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCC
Q 003726 550 DEHVGILNDRSKPLIFSMARLDGVKNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLH 629 (800)
Q Consensus 550 ~~~~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~ 629 (800)
..+|. ....+.++|+|||.+.||++.|++|++++....++++|+|+|+|+. .+.++++++++++
T Consensus 538 -r~lgi--~~~~kgiLfVGRLa~EKGld~LLeAla~L~~~~pnvrLvIVGDGP~------------reeLe~la~eLgL- 601 (794)
T PLN02501 538 -RELGQ--QAFSKGAYFLGKMVWAKGYRELIDLLAKHKNELDGFNLDVFGNGED------------AHEVQRAAKRLDL- 601 (794)
T ss_pred -HhcCC--ccccCceEEEEcccccCCHHHHHHHHHHHHhhCCCeEEEEEcCCcc------------HHHHHHHHHHcCC-
Confidence 12343 2233458999999999999999999999877778999999999998 6788888999887
Q ss_pred CcEEEcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHH
Q 003726 630 GQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQ 709 (800)
Q Consensus 630 ~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~~GG~~EiI~dg~~G~lv~p~d~e~ 709 (800)
+|.|+|.+. +...+|+. +|+||+||.+|+||++++||||||+|||+|+.||. +++.++.+|+++ .|.++
T Consensus 602 -~V~FLG~~d------d~~~lyas-aDVFVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~-e~V~~g~nGll~--~D~Ea 670 (794)
T PLN02501 602 -NLNFLKGRD------HADDSLHG-YKVFINPSISDVLCTATAEALAMGKFVVCADHPSN-EFFRSFPNCLTY--KTSED 670 (794)
T ss_pred -EEEecCCCC------CHHHHHHh-CCEEEECCCcccchHHHHHHHHcCCCEEEecCCCC-ceEeecCCeEec--CCHHH
Confidence 499998533 23456775 99999999999999999999999999999999985 447778888865 68999
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003726 710 VAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLTLAGV 758 (800)
Q Consensus 710 lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 758 (800)
++++|.+++ .|+..+..+.+ ...|||+..++++++...+
T Consensus 671 fAeAI~~LL----sd~~~rl~~~a------~~~~SWeAaadrLle~~~~ 709 (794)
T PLN02501 671 FVAKVKEAL----ANEPQPLTPEQ------RYNLSWEAATQRFMEYSDL 709 (794)
T ss_pred HHHHHHHHH----hCchhhhHHHH------HhhCCHHHHHHHHHHhhcc
Confidence 999998877 56654333321 3489999999999997654
No 67
>PHA01630 putative group 1 glycosyl transferase
Probab=99.96 E-value=2.3e-28 Score=268.82 Aligned_cols=258 Identities=12% Similarity=0.112 Sum_probs=188.7
Q ss_pred ECCCCchHHHHHHHhcCCCeEEEEecCCccccCCCChhhHHhhhhhhccchhhhHHHHH-hccCCEEEecCHHHHhhccc
Q 003726 402 GNYSDGNLVATLLSYKLGVTQCNIAHALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTA-MNNADFIITSTYQEIAGSKN 480 (800)
Q Consensus 402 ~h~~~~~lva~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a-~~~AD~IIt~S~~ei~~~~~ 480 (800)
.|+....+..+....+.|+|+++++|+... +.. ..+... .+.+|.||++|....+...+
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~v~e~~~~~~-------l~~-------------~~~~~~~~~~ad~ii~~S~~~~~~l~~ 111 (331)
T PHA01630 52 YYTIFNSMLFWKGIPHVGKNIVFEVADTDA-------ISH-------------TALYFFRNQPVDEIVVPSQWSKNAFYT 111 (331)
T ss_pred ehhhhhHHHHHhhccccCCceEEEEEeech-------hhH-------------HHHHHHhhccCCEEEECCHHHHHHHHH
Confidence 443333455555556678999999998211 000 122335 67899999999876652111
Q ss_pred CccccccccccccccceeeeccCCCCCCceEEecCCCCCCCCCCCChHHHHHHHhhccccccccCCccccccccccCCCC
Q 003726 481 NVGQYENHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLYDPKQNDEHVGILNDRS 560 (800)
Q Consensus 481 ~~gqy~~~~~f~~p~l~~vv~Gi~v~~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~Gll~~~~ 560 (800)
.|++. ..++.|||||+|.+.|.|.... ..+
T Consensus 112 --------------------~g~~~-~~~i~vIpNGVd~~~f~~~~~~-----------------------------~~~ 141 (331)
T PHA01630 112 --------------------SGLKI-PQPIYVIPHNLNPRMFEYKPKE-----------------------------KPH 141 (331)
T ss_pred --------------------cCCCC-CCCEEEECCCCCHHHcCCCccc-----------------------------cCC
Confidence 12221 3579999999999888654210 124
Q ss_pred CcEEEEEecCCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEcccccC
Q 003726 561 KPLIFSMARLDGVKNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISAQMN 640 (800)
Q Consensus 561 k~iIl~vGRL~~~Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~~~~ 640 (800)
+.+++++|++.+.||++.|++|++++.+..++++|+++|++.. ..++ .++.+ +.|
T Consensus 142 ~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~~llivG~~~~------------~~~l------~~~~~---~~~---- 196 (331)
T PHA01630 142 PCVLAILPHSWDRKGGDIVVKIFHELQNEGYDFYFLIKSSNML------------DPRL------FGLNG---VKT---- 196 (331)
T ss_pred CEEEEEeccccccCCHHHHHHHHHHHHhhCCCEEEEEEeCccc------------chhh------ccccc---eec----
Confidence 4567788899999999999999999988778999999997654 1111 12222 233
Q ss_pred ccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECC----------------
Q 003726 641 RVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDP---------------- 704 (800)
Q Consensus 641 ~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~~GG~~EiI~dg~~G~lv~p---------------- 704 (800)
.++.+++..+|+. +|+||+||.+|+||++++||||||+|||+|+.||..|+|.++.+|+++++
T Consensus 197 ~v~~~~l~~~y~~-aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~ 275 (331)
T PHA01630 197 PLPDDDIYSLFAG-CDILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGY 275 (331)
T ss_pred cCCHHHHHHHHHh-CCEEEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccccCCccccc
Confidence 4667899999996 99999999999999999999999999999999999999999988777752
Q ss_pred ---CCHHHHHHHHHHHHHHhcCC--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Q 003726 705 ---YHPDQVAELMIEFFEKCYND--PSHWNKISDGGLKRIYERYTWKIYSERLLTLAGVY 759 (800)
Q Consensus 705 ---~d~e~lA~aI~~~l~~l~~d--p~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~~ 759 (800)
.|.+++++++.+++ .| ++.++++..++...+.++|||+.++++++++|+.|
T Consensus 276 ~v~~~~~~~~~~ii~~l----~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~~~ 331 (331)
T PHA01630 276 FLDPDIEDAYQKLLEAL----ANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILEKY 331 (331)
T ss_pred ccCCCHHHHHHHHHHHH----hCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcC
Confidence 26788888887766 44 34455555555555679999999999999999754
No 68
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=99.96 E-value=3.1e-27 Score=269.14 Aligned_cols=329 Identities=17% Similarity=0.183 Sum_probs=207.9
Q ss_pred CCCceEEEECCCCchHHHHHHH-hcCCCeEEEEecCCccccCC---CChhh-------HHhhhhhhccchhhhHHHHHhc
Q 003726 394 QGVPDLIIGNYSDGNLVATLLS-YKLGVTQCNIAHALEKTKYP---DSDLY-------WRKFEEKYHFSSQFTADLTAMN 462 (800)
Q Consensus 394 ~~~PDIIh~h~~~~~lva~lla-~~~gip~v~t~H~l~~~~~~---~s~~~-------~~~~~~~y~f~~~~~~e~~a~~ 462 (800)
..++||+|+|.|..+..+..++ +..++|.|+|.|+.+...+. ..++| +..-.....+..+...|+.+..
T Consensus 146 ~~~~dViH~HeWm~g~a~~~lK~~~~~VptVfTtHAT~~GR~l~~g~~~~y~~l~~~~~d~eA~~~~I~~r~~iE~~aa~ 225 (590)
T cd03793 146 DEPAVVAHFHEWQAGVGLPLLRKRKVDVSTIFTTHATLLGRYLCAGNVDFYNNLDYFDVDKEAGKRGIYHRYCIERAAAH 225 (590)
T ss_pred CCCCeEEEEcchhHhHHHHHHHHhCCCCCEEEEecccccccccccCCcccchhhhhcchhhhhhcccchHHHHHHHHHHh
Confidence 4689999999999999888888 56789999999986554431 11122 1111122333444456899999
Q ss_pred cCCEEEecCHHHHhhcccCccccccccccccccceeeeccCCCCCCceEEecCCCCCCCCCCCChHHHHHHHhhcccccc
Q 003726 463 NADFIITSTYQEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDL 542 (800)
Q Consensus 463 ~AD~IIt~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~ 542 (800)
.||.+||+|..+....+.. .|.+ +++ |||||+|...|.+..+..+.-..-+..|.++
T Consensus 226 ~Ad~fttVS~it~~E~~~L-------------------l~~~--pd~--ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f 282 (590)
T cd03793 226 CAHVFTTVSEITAYEAEHL-------------------LKRK--PDV--VLPNGLNVKKFSALHEFQNLHAQSKEKINEF 282 (590)
T ss_pred hCCEEEECChHHHHHHHHH-------------------hCCC--CCE--EeCCCcchhhcccchhhhhhhHHhhhhhhHH
Confidence 9999999999776633222 1222 334 9999999999987654322111111222221
Q ss_pred ccCCccccccccccCCCCCcEEEE-EecCCC-CCCHHHHHHHHHHhhcc----CCC---eEEEEEeccCCCCCccchHH-
Q 003726 543 LYDPKQNDEHVGILNDRSKPLIFS-MARLDG-VKNLTGLVECYGKSSKL----REL---VNLVVVGGYMDVKNSRDREE- 612 (800)
Q Consensus 543 l~~~~~~~~~~Gll~~~~k~iIl~-vGRL~~-~Kgl~~LleA~~~l~~~----~~~---v~LvIVG~g~~~~~~~~~e~- 612 (800)
. ....+.++++ ++++++++| +||+.. +||++.|++|++++... ..+ +-|+|+=.+.. +...|.
T Consensus 283 ~--~~~~~~~~~~--~~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~---~~~~~~l 355 (590)
T cd03793 283 V--RGHFYGHYDF--DLDKTLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTN---NFNVESL 355 (590)
T ss_pred H--HHHHhhhcCC--CCCCeEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccC---CcCHHhh
Confidence 1 1123455676 667777777 799998 99999999999998641 222 33444443321 000000
Q ss_pred --HHH-------------------------------------------------------------------HHHHHHHH
Q 003726 613 --MAE-------------------------------------------------------------------IEKMHGLI 623 (800)
Q Consensus 613 --~~~-------------------------------------------------------------------~~~l~~li 623 (800)
.+. .+.+...+
T Consensus 356 ~g~~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~ 435 (590)
T cd03793 356 KGQAVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHI 435 (590)
T ss_pred cchHHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHH
Confidence 000 01112223
Q ss_pred HHcCCCC----c--EEEccc---ccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcCcccc----c
Q 003726 624 KQYNLHG----Q--FRWISA---QMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGP----A 690 (800)
Q Consensus 624 ~~~gL~~----~--V~flG~---~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~~GG~----~ 690 (800)
++.+|.+ + |.|+.. .++.+-..+.+.+++. ||+||+||++|+||++++||||||+|||+|+.+|. .
T Consensus 436 r~~~l~N~~~drVkvif~P~~L~~~~~~~g~~y~E~~~g-~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~ 514 (590)
T cd03793 436 RRIQLFNSPEDRVKVVFHPEFLSSTNPLLGLDYEEFVRG-CHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFME 514 (590)
T ss_pred HHhcCcCCCCCeEEEEEcccccCCCCCcCCcchHHHhhh-ceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhH
Confidence 3333422 2 445442 1223334456777775 99999999999999999999999999999999998 5
Q ss_pred cccccC-ceEEEECC-------CCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH-HHHHHhCCHHHHHHHHHHHHHH
Q 003726 691 EIIEHG-VSGFHIDP-------YHPDQVAELMIEFFEKCYNDPSHWNKISDGGL-KRIYERYTWKIYSERLLTLAGV 758 (800)
Q Consensus 691 EiI~dg-~~G~lv~p-------~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~-~~v~~~ysw~~~a~~ll~ly~~ 758 (800)
|++.++ ..|+.+.+ .+.++++++|.+++ +. +.++.+.++++ ++..+.|+|+..++.|.+.|..
T Consensus 515 E~v~~~~~~gi~V~~r~~~~~~e~v~~La~~m~~~~----~~-~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~~ 586 (590)
T cd03793 515 EHIEDPESYGIYIVDRRFKSPDESVQQLTQYMYEFC----QL-SRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQL 586 (590)
T ss_pred HHhccCCCceEEEecCCccchHHHHHHHHHHHHHHh----CC-cHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 666554 36777763 34445555554443 44 45666666654 3445899999999999998764
No 69
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.95 E-value=7.2e-26 Score=250.71 Aligned_cols=343 Identities=14% Similarity=0.120 Sum_probs=236.2
Q ss_pred eEEEEEccCcCCCCccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCcccccceeecC
Q 003726 268 FNVVIVSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIQNQGLDVIPKILIVTRLIPDAKGTTCNQRLERISG 347 (800)
Q Consensus 268 ~rI~ivs~hg~~~~~~~lg~p~tGG~~vyild~araL~~eLa~~L~~~GheV~~~i~VvTr~~p~~~g~~~~~~~e~~~g 347 (800)
|||+|++.. +||.+.... +|++.|.++||+|+ ++|..... . ....+
T Consensus 2 ~~i~i~~~g-------------~gG~~~~~~--------~la~~L~~~g~ev~----vv~~~~~~-~----~~~~~---- 47 (357)
T PRK00726 2 KKILLAGGG-------------TGGHVFPAL--------ALAEELKKRGWEVL----YLGTARGM-E----ARLVP---- 47 (357)
T ss_pred cEEEEEcCc-------------chHhhhHHH--------HHHHHHHhCCCEEE----EEECCCch-h----hhccc----
Confidence 898888631 378888777 67777899999999 88864210 0 00111
Q ss_pred CCCeEEEEeccCCCCccccccccccC-ChhhHHHHHHHHHHHHHHHhCCCceEEEECCCCchHHHHHHHhcCCCeEEEEe
Q 003726 348 TEHTHILRVPFRTENGILRKWISRFD-VWPYLETFAEDASNEIAAELQGVPDLIIGNYSDGNLVATLLSYKLGVTQCNIA 426 (800)
Q Consensus 348 ~~~v~I~rvp~~~~~~~~~~~isr~~-i~~yl~~f~~~~~~~ll~~~~~~PDIIh~h~~~~~lva~lla~~~gip~v~t~ 426 (800)
..++.+.+++.....+. ...++.. .+.++ .. .....++++ +.+|||||+|.+..++.+.++++..++|++++.
T Consensus 48 ~~g~~~~~~~~~~~~~~--~~~~~l~~~~~~~-~~-~~~~~~~ik--~~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~ 121 (357)
T PRK00726 48 KAGIEFHFIPSGGLRRK--GSLANLKAPFKLL-KG-VLQARKILK--RFKPDVVVGFGGYVSGPGGLAARLLGIPLVIHE 121 (357)
T ss_pred cCCCcEEEEeccCcCCC--ChHHHHHHHHHHH-HH-HHHHHHHHH--hcCCCEEEECCCcchhHHHHHHHHcCCCEEEEc
Confidence 13677888876432110 0000000 11111 11 112223333 348999999998877888888888899998876
Q ss_pred cCCccccCCCChhhHHhhhhhhccchhhhHHHHHhccCCEEEecCHHHHhhcccCccccccccccccccceeeeccCCCC
Q 003726 427 HALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNNADFIITSTYQEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVF 506 (800)
Q Consensus 427 H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~ 506 (800)
|+.... ..+++.++.+|.+++++++... . ..
T Consensus 122 ~~~~~~----------------------~~~r~~~~~~d~ii~~~~~~~~---------------------~------~~ 152 (357)
T PRK00726 122 QNAVPG----------------------LANKLLARFAKKVATAFPGAFP---------------------E------FF 152 (357)
T ss_pred CCCCcc----------------------HHHHHHHHHhchheECchhhhh---------------------c------cC
Confidence 653110 1134567789999998874321 0 12
Q ss_pred CCceEEecCCCCCCCCCCCChHHHHHHHhhccccccccCCccccccccccCCCCCcEEEEEecCCCCCCHHHHH-HHHHH
Q 003726 507 DPKFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLYDPKQNDEHVGILNDRSKPLIFSMARLDGVKNLTGLV-ECYGK 585 (800)
Q Consensus 507 ~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~Gll~~~~k~iIl~vGRL~~~Kgl~~Ll-eA~~~ 585 (800)
..++.+|+||+|.+.+.+.... +++++ +++.++|+++|+....|++..++ +|+.+
T Consensus 153 ~~~i~vi~n~v~~~~~~~~~~~----------------------~~~~~--~~~~~~i~~~gg~~~~~~~~~~l~~a~~~ 208 (357)
T PRK00726 153 KPKAVVTGNPVREEILALAAPP----------------------ARLAG--REGKPTLLVVGGSQGARVLNEAVPEALAL 208 (357)
T ss_pred CCCEEEECCCCChHhhcccchh----------------------hhccC--CCCCeEEEEECCcHhHHHHHHHHHHHHHH
Confidence 5789999999998776542211 12344 45677888999988888876555 89888
Q ss_pred hhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEcccccCccChHHHHHHHHccCcEEEecCCCC
Q 003726 586 SSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYE 665 (800)
Q Consensus 586 l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E 665 (800)
+.+. + ..++++|++.. +.+.+..+ +++. |.+.|++ +++..+++. +|+++.+|-
T Consensus 209 ~~~~-~-~~~~~~G~g~~-------------~~~~~~~~-~~~~--v~~~g~~------~~~~~~~~~-~d~~i~~~g-- 261 (357)
T PRK00726 209 LPEA-L-QVIHQTGKGDL-------------EEVRAAYA-AGIN--AEVVPFI------DDMAAAYAA-ADLVICRAG-- 261 (357)
T ss_pred hhhC-c-EEEEEcCCCcH-------------HHHHHHhh-cCCc--EEEeehH------hhHHHHHHh-CCEEEECCC--
Confidence 7653 3 56778888854 34444445 6663 9999853 478888886 999999762
Q ss_pred CCcHHHHHHHHcCCcEEEcCccc--------cccccccCceEEEECCCC--HHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 003726 666 AFGLTVVEAMTCGLPTFATCHGG--------PAEIIEHGVSGFHIDPYH--PDQVAELMIEFFEKCYNDPSHWNKISDGG 735 (800)
Q Consensus 666 ~fGl~vlEAMA~GlPVIAT~~GG--------~~EiI~dg~~G~lv~p~d--~e~lA~aI~~~l~~l~~dp~~~~~ms~~a 735 (800)
+.+++|||+||+|||++..++ ..+.+.+.++|+++++.| +++++++|.+++ +|++.+++|++++
T Consensus 262 --~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll----~~~~~~~~~~~~~ 335 (357)
T PRK00726 262 --ASTVAELAAAGLPAILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLELL----SDPERLEAMAEAA 335 (357)
T ss_pred --HHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHH----cCHHHHHHHHHHH
Confidence 689999999999999997653 235677788999999888 999999997766 8999999999999
Q ss_pred HHHHHHhCCHHHHHHHHHHHHH
Q 003726 736 LKRIYERYTWKIYSERLLTLAG 757 (800)
Q Consensus 736 ~~~v~~~ysw~~~a~~ll~ly~ 757 (800)
++++ +.++-+.+++.++++.+
T Consensus 336 ~~~~-~~~~~~~~~~~~~~~~~ 356 (357)
T PRK00726 336 RALG-KPDAAERLADLIEELAR 356 (357)
T ss_pred HhcC-CcCHHHHHHHHHHHHhh
Confidence 9986 89999999999988754
No 70
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=99.95 E-value=7e-26 Score=259.80 Aligned_cols=312 Identities=15% Similarity=0.084 Sum_probs=213.8
Q ss_pred CceEEEECCCCchHHHHHHHhcC-CCeEEEEecCCccccCCCChhhHHhhhhhhccchhhhHHHHHhccCCEEEecCHHH
Q 003726 396 VPDLIIGNYSDGNLVATLLSYKL-GVTQCNIAHALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNNADFIITSTYQE 474 (800)
Q Consensus 396 ~PDIIh~h~~~~~lva~lla~~~-gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~e 474 (800)
..|+|++|+++..+++.++.++. ..|+++..|... |.++. |..+ .++ ..-...|-.+|.|...|...
T Consensus 131 ~~d~iwihDyhl~llp~~lr~~~~~~~i~~f~Hipf----P~~e~-~~~l------p~~-~~ll~~~l~~D~igF~t~~~ 198 (460)
T cd03788 131 PGDLVWVHDYHLLLLPQMLRERGPDARIGFFLHIPF----PSSEI-FRCL------PWR-EELLRGLLGADLIGFQTERY 198 (460)
T ss_pred CCCEEEEeChhhhHHHHHHHhhCCCCeEEEEEeCCC----CChHH-HhhC------CCh-HHHHHHHhcCCEEEECCHHH
Confidence 56999999999888888777654 589999999753 22222 2211 111 11123666799999998754
Q ss_pred HhhcccCccccccccccccccceeeeccCCCCCCceEEecCCCCCCCCCCCChHHHHHHHhhccccccccCCcccccccc
Q 003726 475 IAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLYDPKQNDEHVG 554 (800)
Q Consensus 475 i~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~G 554 (800)
.....+.....-... .. ........|. ..++.++|||+|.+.|.+.......... .++..+
T Consensus 199 ~~~Fl~~~~~~l~~~-~~-~~~~i~~~g~---~~~i~vip~GID~~~f~~~~~~~~~~~~--------------~~~~~~ 259 (460)
T cd03788 199 ARNFLSCCSRLLGLE-VT-DDGGVEYGGR---RVRVGAFPIGIDPDAFRKLAASPEVQER--------------AAELRE 259 (460)
T ss_pred HHHHHHHHHHHcCCc-cc-CCceEEECCE---EEEEEEEeCeEcHHHHHHHhcCchhHHH--------------HHHHHH
Confidence 432211110000000 00 0001111221 3478999999999988754221110000 001123
Q ss_pred ccCCCCCcEEEEEecCCCCCCHHHHHHHHHHhhccCCC----eEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCC-
Q 003726 555 ILNDRSKPLIFSMARLDGVKNLTGLVECYGKSSKLREL----VNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLH- 629 (800)
Q Consensus 555 ll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~l~~~~~~----v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~- 629 (800)
. .+++++|+++||+++.||++.+++|++++.+.+|+ ++|+++|++... ...+.....+++.+++++.+..
T Consensus 260 ~--~~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~~g---~~~~~~~l~~~l~~~v~~in~~~ 334 (460)
T cd03788 260 R--LGGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPSRT---DVPEYQELRREVEELVGRINGKF 334 (460)
T ss_pred h--cCCCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCCCc---CcHHHHHHHHHHHHHHHHHHhcc
Confidence 2 45788999999999999999999999998777665 679999876421 1123334556666666654321
Q ss_pred -----CcEEEcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCc----EEEcCccccccccccCceEE
Q 003726 630 -----GQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLP----TFATCHGGPAEIIEHGVSGF 700 (800)
Q Consensus 630 -----~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlP----VIAT~~GG~~EiI~dg~~G~ 700 (800)
..|.+++ ..++.+++..+|+. ||+||+||..|+||++++||||||+| ||+|+.+|..+. +.+|+
T Consensus 335 g~~~~~~v~~~~---g~v~~~el~~~y~~-aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~---~~~g~ 407 (460)
T cd03788 335 GTLDWTPVRYLY---RSLPREELAALYRA-ADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEE---LSGAL 407 (460)
T ss_pred CCCCceeEEEEe---CCCCHHHHHHHHHh-ccEEEeCccccccCcccceeEEEecCCCceEEEeccccchhh---cCCCE
Confidence 2355553 26678999999996 99999999999999999999999999 999998888876 46899
Q ss_pred EECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 003726 701 HIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLT 754 (800)
Q Consensus 701 lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ 754 (800)
+++|.|++++|++|.++++ ++++.++++++++++.+ ++|||+..+++++.
T Consensus 408 lv~p~d~~~la~ai~~~l~---~~~~e~~~~~~~~~~~v-~~~~~~~w~~~~l~ 457 (460)
T cd03788 408 LVNPYDIDEVADAIHRALT---MPLEERRERHRKLREYV-RTHDVQAWANSFLD 457 (460)
T ss_pred EECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHH
Confidence 9999999999999988772 45688889999999987 78999999999875
No 71
>PHA01633 putative glycosyl transferase group 1
Probab=99.94 E-value=2.1e-25 Score=244.01 Aligned_cols=225 Identities=14% Similarity=0.142 Sum_probs=167.3
Q ss_pred HhccCCEEEecCHHHHhhcccCccccccccccccccceeeeccCCCCCCceEEecCCCCCCCCCCCChHHHHHHHhhccc
Q 003726 460 AMNNADFIITSTYQEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSDKEKRLIALHGQI 539 (800)
Q Consensus 460 a~~~AD~IIt~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~ 539 (800)
.|.+.+.+|++|+...+..+ ..|++ .+ + +|+||+|.+.|.|........
T Consensus 89 ~m~~~~~vIavS~~t~~~L~--------------------~~G~~--~~-i-~I~~GVD~~~f~p~~~~~~~~------- 137 (335)
T PHA01633 89 YLLQDVKFIPNSKFSAENLQ--------------------EVGLQ--VD-L-PVFHGINFKIVENAEKLVPQL------- 137 (335)
T ss_pred HHhcCCEEEeCCHHHHHHHH--------------------HhCCC--Cc-e-eeeCCCChhhcCccchhhHHH-------
Confidence 55667799999986655211 12443 22 3 478999999988754221111
Q ss_pred cccccCCccccccccccCCCCCcEEEEEecCCCCCCHHHHHHHHHHhhccCCC----eEEEEEeccCCCCCccchHHHHH
Q 003726 540 EDLLYDPKQNDEHVGILNDRSKPLIFSMARLDGVKNLTGLVECYGKSSKLREL----VNLVVVGGYMDVKNSRDREEMAE 615 (800)
Q Consensus 540 ~~~l~~~~~~~~~~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~l~~~~~~----v~LvIVG~g~~~~~~~~~e~~~~ 615 (800)
++.++.. .++.++++++||+++.||++.|++|++++.+..++ ++|+++|++
T Consensus 138 ----------r~~~~~~-~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~~-------------- 192 (335)
T PHA01633 138 ----------KQKLDKD-FPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISHK-------------- 192 (335)
T ss_pred ----------HHHhCcC-CCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcHH--------------
Confidence 1223321 14667899999999999999999999999876654 578887632
Q ss_pred HHHHHHHHHHcCCCCcEEEcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcCcccccccccc
Q 003726 616 IEKMHGLIKQYNLHGQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH 695 (800)
Q Consensus 616 ~~~l~~li~~~gL~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~~GG~~EiI~d 695 (800)
..+++++.++|+|+|... .++.+++.++|+. +|+||+||.+|+||++++||||||+|||+|+.||..|++.+
T Consensus 193 ------~~~~l~l~~~V~f~g~~G-~~~~~dl~~~y~~-aDifV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~ 264 (335)
T PHA01633 193 ------QFTQLEVPANVHFVAEFG-HNSREYIFAFYGA-MDFTIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSW 264 (335)
T ss_pred ------HHHHcCCCCcEEEEecCC-CCCHHHHHHHHHh-CCEEEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCC
Confidence 124567888999996332 4567899999996 99999999999999999999999999999999999887441
Q ss_pred ------------------CceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 003726 696 ------------------GVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLT 754 (800)
Q Consensus 696 ------------------g~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ 754 (800)
...||.+++.|++++|++|..+++. .+++. ++.++++++ ++|+|+.++++|++
T Consensus 265 ~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~--~~~~~---~~~~~~~~a-~~f~~~~~~~~~~~ 335 (335)
T PHA01633 265 QWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFEL--QDREE---RSMKLKELA-KKYDIRNLYTRFLE 335 (335)
T ss_pred ccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhc--cChhh---hhHHHHHHH-HhcCHHHHHHHhhC
Confidence 2358899999999999999887632 34433 366777666 89999999998863
No 72
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.94 E-value=1.9e-24 Score=237.84 Aligned_cols=324 Identities=14% Similarity=0.122 Sum_probs=223.5
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCcccccceeecCCCCeEEEEeccCCCCcccccc
Q 003726 289 DTGGQVVYILDQVRALENEMLLRIQNQGLDVIPKILIVTRLIPDAKGTTCNQRLERISGTEHTHILRVPFRTENGILRKW 368 (800)
Q Consensus 289 ~tGG~~vyild~araL~~eLa~~L~~~GheV~~~i~VvTr~~p~~~g~~~~~~~e~~~g~~~v~I~rvp~~~~~~~~~~~ 368 (800)
.+||...++. .|++.|.++||+|+ |+|...... .+. ....++++.++|+....+
T Consensus 8 ~~gG~~~~~~--------~la~~l~~~G~ev~----v~~~~~~~~--------~~~-~~~~~~~~~~~~~~~~~~----- 61 (350)
T cd03785 8 GTGGHIFPAL--------ALAEELRERGAEVL----FLGTKRGLE--------ARL-VPKAGIPLHTIPVGGLRR----- 61 (350)
T ss_pred CchhhhhHHH--------HHHHHHHhCCCEEE----EEECCCcch--------hhc-ccccCCceEEEEecCcCC-----
Confidence 3588888888 67777899999999 888753211 111 111357788887643211
Q ss_pred ccccCChhhHHHH---HH--HHHHHHHHHhCCCceEEEECCCCchHHHHHHHhcCCCeEEEEecCCccccCCCChhhHHh
Q 003726 369 ISRFDVWPYLETF---AE--DASNEIAAELQGVPDLIIGNYSDGNLVATLLSYKLGVTQCNIAHALEKTKYPDSDLYWRK 443 (800)
Q Consensus 369 isr~~i~~yl~~f---~~--~~~~~ll~~~~~~PDIIh~h~~~~~lva~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~ 443 (800)
...+..+..+ .. .....+++ +.+||+||+|.+..++.+.++++..|+|+++..|+... .
T Consensus 62 ---~~~~~~~~~~~~~~~~~~~~~~~i~--~~~pDvI~~~~~~~~~~~~~~a~~~~~p~v~~~~~~~~-----------~ 125 (350)
T cd03785 62 ---KGSLKKLKAPFKLLKGVLQARKILK--KFKPDVVVGFGGYVSGPVGLAAKLLGIPLVIHEQNAVP-----------G 125 (350)
T ss_pred ---CChHHHHHHHHHHHHHHHHHHHHHH--hcCCCEEEECCCCcchHHHHHHHHhCCCEEEEcCCCCc-----------c
Confidence 1111111111 11 11223333 34899999998777777788888899998875554211 0
Q ss_pred hhhhhccchhhhHHHHHhccCCEEEecCHHHHhhcccCccccccccccccccceeeeccCCCCCCceEEecCCCCCCCCC
Q 003726 444 FEEKYHFSSQFTADLTAMNNADFIITSTYQEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYF 523 (800)
Q Consensus 444 ~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~~k~~VIpnGvD~~~f~ 523 (800)
..+++.++.+|.|+++|+...+. ....++.+|+||+|.+.+.
T Consensus 126 -----------~~~~~~~~~~~~vi~~s~~~~~~---------------------------~~~~~~~~i~n~v~~~~~~ 167 (350)
T cd03785 126 -----------LANRLLARFADRVALSFPETAKY---------------------------FPKDKAVVTGNPVREEILA 167 (350)
T ss_pred -----------HHHHHHHHhhCEEEEcchhhhhc---------------------------CCCCcEEEECCCCchHHhh
Confidence 01234667799999999865440 1256899999999988765
Q ss_pred CCChHHHHHHHhhccccccccCCccccccccccCCCCCcEEEEEecCCCCCCHHH-HHHHHHHhhccCCCeEE-EEEecc
Q 003726 524 PYSDKEKRLIALHGQIEDLLYDPKQNDEHVGILNDRSKPLIFSMARLDGVKNLTG-LVECYGKSSKLRELVNL-VVVGGY 601 (800)
Q Consensus 524 p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~Gll~~~~k~iIl~vGRL~~~Kgl~~-LleA~~~l~~~~~~v~L-vIVG~g 601 (800)
+... ++.+++ ++++++++++|+....|+... +++++..+.+ +++.+ +++|.+
T Consensus 168 ~~~~----------------------~~~~~~--~~~~~~i~~~~g~~~~~~~~~~l~~a~~~l~~--~~~~~~~i~G~g 221 (350)
T cd03785 168 LDRE----------------------RARLGL--RPGKPTLLVFGGSQGARAINEAVPEALAELLR--KRLQVIHQTGKG 221 (350)
T ss_pred hhhh----------------------HHhcCC--CCCCeEEEEECCcHhHHHHHHHHHHHHHHhhc--cCeEEEEEcCCc
Confidence 4321 133555 567778888887777777654 5588888763 45664 466776
Q ss_pred CCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcE
Q 003726 602 MDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPT 681 (800)
Q Consensus 602 ~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPV 681 (800)
. .+++.+.++++ .++|.|.|++ +++..+++. +|++|.+|- +++++|||+||+||
T Consensus 222 -~------------~~~l~~~~~~~--~~~v~~~g~~------~~~~~~l~~-ad~~v~~sg----~~t~~Eam~~G~Pv 275 (350)
T cd03785 222 -D------------LEEVKKAYEEL--GVNYEVFPFI------DDMAAAYAA-ADLVISRAG----ASTVAELAALGLPA 275 (350)
T ss_pred -c------------HHHHHHHHhcc--CCCeEEeehh------hhHHHHHHh-cCEEEECCC----HhHHHHHHHhCCCE
Confidence 4 35666777766 4789999943 578888886 999998762 68999999999999
Q ss_pred EEcCccc--------cccccccCceEEEECCC--CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHH
Q 003726 682 FATCHGG--------PAEIIEHGVSGFHIDPY--HPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYS 749 (800)
Q Consensus 682 IAT~~GG--------~~EiI~dg~~G~lv~p~--d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a 749 (800)
|+++.++ ..+.+.++++|+++++. |+++++++|.+++ .|++.+++|++++++++ +.+.-++++
T Consensus 276 v~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll----~~~~~~~~~~~~~~~~~-~~~~~~~i~ 348 (350)
T cd03785 276 ILIPLPYAADDHQTANARALVKAGAAVLIPQEELTPERLAAALLELL----SDPERLKAMAEAARSLA-RPDAAERIA 348 (350)
T ss_pred EEeecCCCCCCcHHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHh----cCHHHHHHHHHHHHhcC-CCCHHHHHH
Confidence 9987654 35677778899999987 8999999997776 89999999999999886 466666554
No 73
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.93 E-value=3.4e-24 Score=235.56 Aligned_cols=316 Identities=16% Similarity=0.158 Sum_probs=208.2
Q ss_pred HHHHHHHHCCCccccceeEEeCCCCCCCCCcccccceeecCCCCeEEEEeccCCCCccccccccccCChhhHHHHH--HH
Q 003726 307 EMLLRIQNQGLDVIPKILIVTRLIPDAKGTTCNQRLERISGTEHTHILRVPFRTENGILRKWISRFDVWPYLETFA--ED 384 (800)
Q Consensus 307 eLa~~L~~~GheV~~~i~VvTr~~p~~~g~~~~~~~e~~~g~~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~--~~ 384 (800)
.|+++|.++||+|+ ++|+..... .+ .....++.+.+++.....+ .+....++....+. ..
T Consensus 19 ~La~~L~~~g~eV~----vv~~~~~~~--------~~-~~~~~g~~~~~i~~~~~~~-----~~~~~~l~~~~~~~~~~~ 80 (348)
T TIGR01133 19 AVAEELIKRGVEVL----WLGTKRGLE--------KR-LVPKAGIEFYFIPVGGLRR-----KGSFRLIKTPLKLLKAVF 80 (348)
T ss_pred HHHHHHHhCCCEEE----EEeCCCcch--------hc-ccccCCCceEEEeccCcCC-----CChHHHHHHHHHHHHHHH
Confidence 67778899999999 888632110 00 0111357777777643211 00011111111111 11
Q ss_pred HHHHHHHHhCCCceEEEECCCCchHHHHHHHhcCCCeEEEEecCCccccCCCChhhHHhhhhhhccchhhhHHHHHhccC
Q 003726 385 ASNEIAAELQGVPDLIIGNYSDGNLVATLLSYKLGVTQCNIAHALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNNA 464 (800)
Q Consensus 385 ~~~~ll~~~~~~PDIIh~h~~~~~lva~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~A 464 (800)
...++++ +.+||+||+|.+..+..+.++++..++|+|...|... + . ..+++..+.+
T Consensus 81 ~l~~~i~--~~~pDvVi~~~~~~~~~~~~~~~~~~~p~v~~~~~~~----~-------~-----------~~~~~~~~~~ 136 (348)
T TIGR01133 81 QARRILK--KFKPDAVIGFGGYVSGPAGLAAKLLGIPLFHHEQNAV----P-------G-----------LTNKLLSRFA 136 (348)
T ss_pred HHHHHHH--hcCCCEEEEcCCcccHHHHHHHHHcCCCEEEECCCCC----c-------c-----------HHHHHHHHHh
Confidence 2223333 3489999999877777777788888999874333210 0 0 0134567789
Q ss_pred CEEEecCHHHHhhcccCccccccccccccccceeeeccCCCCCCceEEecCCCCCCCCCCCChHHHHHHHhhcccccccc
Q 003726 465 DFIITSTYQEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLY 544 (800)
Q Consensus 465 D~IIt~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~ 544 (800)
|.+++.|+.+.+. -+..+|+||+|...+.+....
T Consensus 137 d~ii~~~~~~~~~------------------------------~~~~~i~n~v~~~~~~~~~~~---------------- 170 (348)
T TIGR01133 137 KKVLISFPGAKDH------------------------------FEAVLVGNPVRQEIRSLPVPR---------------- 170 (348)
T ss_pred CeeEECchhHhhc------------------------------CCceEEcCCcCHHHhcccchh----------------
Confidence 9999999865430 024799999997665442110
Q ss_pred CCccccccccccCCCCCcEEEEEecCCCCCCHHH-HHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHH
Q 003726 545 DPKQNDEHVGILNDRSKPLIFSMARLDGVKNLTG-LVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLI 623 (800)
Q Consensus 545 ~~~~~~~~~Gll~~~~k~iIl~vGRL~~~Kgl~~-LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li 623 (800)
+.+|+ ++++++|+++|+....|++.. +++++.++.+. ++++++++++.. .+.+++.+
T Consensus 171 ------~~~~~--~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~--~~~~~~~~g~~~------------~~~l~~~~ 228 (348)
T TIGR01133 171 ------ERFGL--REGKPTILVLGGSQGAKILNELVPKALAKLAEK--GIQIVHQTGKND------------LEKVKNVY 228 (348)
T ss_pred ------hhcCC--CCCCeEEEEECCchhHHHHHHHHHHHHHHHhhc--CcEEEEECCcch------------HHHHHHHH
Confidence 22455 567788999998877888654 55888887653 466655554433 35677778
Q ss_pred HHcCCCCcEEEcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcCccc-------cccccccC
Q 003726 624 KQYNLHGQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG-------PAEIIEHG 696 (800)
Q Consensus 624 ~~~gL~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~~GG-------~~EiI~dg 696 (800)
+++++.+.+.|.. .++..+|+. +|++|.+| + |++++|||+||+|+|+++.+| ..+++.++
T Consensus 229 ~~~~l~~~v~~~~--------~~~~~~l~~-ad~~v~~~---g-~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~~ 295 (348)
T TIGR01133 229 QELGIEAIVTFID--------ENMAAAYAA-ADLVISRA---G-ASTVAELAAAGVPAILIPYPYAADDQYYNAKFLEDL 295 (348)
T ss_pred hhCCceEEecCcc--------cCHHHHHHh-CCEEEECC---C-hhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHHC
Confidence 8888755555552 267788886 99999875 2 789999999999999997754 23578889
Q ss_pred ceEEEECCCC--HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHH
Q 003726 697 VSGFHIDPYH--PDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSE 750 (800)
Q Consensus 697 ~~G~lv~p~d--~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~ 750 (800)
++|+++++.| +++++++|.+++ +||+.+++|++++++++ +...-+++++
T Consensus 296 ~~G~~~~~~~~~~~~l~~~i~~ll----~~~~~~~~~~~~~~~~~-~~~~~~~i~~ 346 (348)
T TIGR01133 296 GAGLVIRQKELLPEKLLEALLKLL----LDPANLEAMAEAARKLA-KPDAAKRIAE 346 (348)
T ss_pred CCEEEEecccCCHHHHHHHHHHHH----cCHHHHHHHHHHHHhcC-CccHHHHHHh
Confidence 9999999876 999999997766 89999999999998876 4455554443
No 74
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=99.93 E-value=6.1e-24 Score=242.78 Aligned_cols=319 Identities=17% Similarity=0.164 Sum_probs=216.9
Q ss_pred HHHHHHHHhCCCceEEEECCCCchHHHHHHHhcCC-CeEEEEecCCccccCCCChhhHHhhhhhhccchhhhHHHHHhcc
Q 003726 385 ASNEIAAELQGVPDLIIGNYSDGNLVATLLSYKLG-VTQCNIAHALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNN 463 (800)
Q Consensus 385 ~~~~ll~~~~~~PDIIh~h~~~~~lva~lla~~~g-ip~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~ 463 (800)
.+..+.+.. ..-|+|.+|+.+..+++.++.++.. .++.+..|... |.++++. .+- ....-...|-.
T Consensus 117 fA~~i~~~~-~~~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlHipf----P~~e~f~-~lp-------~r~~il~gll~ 183 (456)
T TIGR02400 117 FAEALAPLL-QPGDIVWVHDYHLMLLPAMLRELGVQNKIGFFLHIPF----PSSEIYR-TLP-------WRRELLEGLLA 183 (456)
T ss_pred HHHHHHHhC-CCCCEEEEecchhhHHHHHHHhhCCCCeEEEEEeCCC----CChHHHh-hCC-------cHHHHHHHHhc
Confidence 344444433 2448999999999999998887753 68888889643 3333221 111 11122448889
Q ss_pred CCEEEecCHHHHhhcccCccccccccccccccceeeeccCCCCCCceEEecCCCCCCCCCCCChHH---HHHHHhhcccc
Q 003726 464 ADFIITSTYQEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSDKE---KRLIALHGQIE 540 (800)
Q Consensus 464 AD~IIt~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~~k~~VIpnGvD~~~f~p~~~~~---~rl~~~~~~~~ 540 (800)
||.|...|+..++.....+...-. ....++- ....|- ..++.++|||+|++.|.+..... .+...
T Consensus 184 ~dligF~t~~~~~~Fl~~~~~~l~--~~~~~~~-~~~~g~---~~~v~viP~GID~~~f~~~~~~~~~~~~~~~------ 251 (456)
T TIGR02400 184 YDLVGFQTYDDARNFLSAVSRELG--LETLPNG-VESGGR---TVRVGAFPIGIDVDRFAEQAKKPSVQKRIAE------ 251 (456)
T ss_pred CCEEEECCHHHHHHHHHHHHHHhC--CcccCCc-eEECCc---EEEEEEecCcCCHHHHHHHhcChhHHHHHHH------
Confidence 999999999776644332211000 0000000 001121 34788999999999997643221 11110
Q ss_pred ccccCCccccccccccCCCCCcEEEEEecCCCCCCHHHHHHHHHHhhccCCC----eEEEEEeccCCCCCccchHHHHHH
Q 003726 541 DLLYDPKQNDEHVGILNDRSKPLIFSMARLDGVKNLTGLVECYGKSSKLREL----VNLVVVGGYMDVKNSRDREEMAEI 616 (800)
Q Consensus 541 ~~l~~~~~~~~~~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~l~~~~~~----v~LvIVG~g~~~~~~~~~e~~~~~ 616 (800)
.++.+ +++++|+++||+++.||++.+++|++++.+.+|+ +.|+++|+... ....+.....
T Consensus 252 --------lr~~~-----~~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p~r---g~~~~~~~l~ 315 (456)
T TIGR02400 252 --------LRESL-----KGRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVPSR---GDVPEYQQLR 315 (456)
T ss_pred --------HHHHc-----CCCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecCCc---cCchHHHHHH
Confidence 11111 3677999999999999999999999998776665 66888875322 0112222233
Q ss_pred HHHHHHHHHcC-CCCc-----EEEcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCc----EEEcCc
Q 003726 617 EKMHGLIKQYN-LHGQ-----FRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLP----TFATCH 686 (800)
Q Consensus 617 ~~l~~li~~~g-L~~~-----V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlP----VIAT~~ 686 (800)
+.+++++.+.+ ..+. |.+++ ..++.+++..+|+. +|+||+||..|+||++++||||||+| +|+|+.
T Consensus 316 ~~i~~lv~~in~~~~~~~~~pv~~l~---~~~~~~el~aly~a-aDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~ 391 (456)
T TIGR02400 316 RQVEELVGRINGRFGTLDWTPIRYLN---RSYDREELMALYRA-ADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEF 391 (456)
T ss_pred HHHHHHHHHHHhccCCCCCccEEEEc---CCCCHHHHHHHHHh-CcEEEECccccccCccHHHHHHhcCCCCceEEEeCC
Confidence 34444433221 1112 44444 35678999999996 99999999999999999999999999 999999
Q ss_pred cccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 003726 687 GGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLTL 755 (800)
Q Consensus 687 GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~l 755 (800)
+|..+.+. +|++++|.|++++|++|.++++ .+++.++++.++.++++ .+||+...++++++-
T Consensus 392 ~G~~~~l~---~gllVnP~d~~~lA~aI~~aL~---~~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~ 453 (456)
T TIGR02400 392 AGAAQELN---GALLVNPYDIDGMADAIARALT---MPLEEREERHRAMMDKL-RKNDVQRWREDFLSD 453 (456)
T ss_pred CCChHHhC---CcEEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-hhCCHHHHHHHHHHH
Confidence 99888873 7999999999999999988773 57888999999999997 579999999998863
No 75
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=99.93 E-value=1.2e-23 Score=238.95 Aligned_cols=292 Identities=15% Similarity=0.117 Sum_probs=196.4
Q ss_pred HHHHHHHhCCCceEEEECCCCchHHHHHHHhcCCCeEEEEecCCccccCCCChhhHHhhhhhhccchhhhHHHHHhccCC
Q 003726 386 SNEIAAELQGVPDLIIGNYSDGNLVATLLSYKLGVTQCNIAHALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNNAD 465 (800)
Q Consensus 386 ~~~ll~~~~~~PDIIh~h~~~~~lva~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD 465 (800)
.+.+++.. +||+||++.++........+++.|+|++.+-|.+.. .+...|+.+. ...+..++.+|
T Consensus 116 ~~~~l~~~--~Pd~v~~~~~~~~~~~l~~~~~~~ip~vl~~~~~~~----~s~~~~~~~~---------~~~r~~~~~~d 180 (425)
T PRK05749 116 VRRFLRFW--RPKLVIIMETELWPNLIAELKRRGIPLVLANARLSE----RSFKRYQKFK---------RFYRLLFKNID 180 (425)
T ss_pred HHHHHHhh--CCCEEEEEecchhHHHHHHHHHCCCCEEEEeccCCh----hhHHHHHHHH---------HHHHHHHHhCC
Confidence 33444433 999999886554222333457789999887655421 1111111111 12345788999
Q ss_pred EEEecCHHHHhhcccCccccccccccccccceeeeccCCCCCCceEEecCCCCCCCCCCCChHHHHHHHhhccccccccC
Q 003726 466 FIITSTYQEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLYD 545 (800)
Q Consensus 466 ~IIt~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~ 545 (800)
.|++.|+...+... ..|++ .+ +.+++|+ +.+.+.+....... .
T Consensus 181 ~ii~~S~~~~~~l~--------------------~~g~~--~~-i~vi~n~-~~d~~~~~~~~~~~-~------------ 223 (425)
T PRK05749 181 LVLAQSEEDAERFL--------------------ALGAK--NE-VTVTGNL-KFDIEVPPELAARA-A------------ 223 (425)
T ss_pred EEEECCHHHHHHHH--------------------HcCCC--CC-cEecccc-cccCCCChhhHHHH-H------------
Confidence 99999997765211 11332 44 7788884 33333222111110 0
Q ss_pred CccccccccccCCCCCcEEEEEecCCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHH
Q 003726 546 PKQNDEHVGILNDRSKPLIFSMARLDGVKNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQ 625 (800)
Q Consensus 546 ~~~~~~~~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~ 625 (800)
..++.++ +++++++++|+. .|+.+.+++|+.++.+..++++|+|+|+|+. ..+++.+++++
T Consensus 224 --~~r~~~~----~~~~vil~~~~~--~~~~~~ll~A~~~l~~~~~~~~liivG~g~~-----------r~~~l~~~~~~ 284 (425)
T PRK05749 224 --TLRRQLA----PNRPVWIAASTH--EGEEELVLDAHRALLKQFPNLLLILVPRHPE-----------RFKEVEELLKK 284 (425)
T ss_pred --HHHHHhc----CCCcEEEEeCCC--chHHHHHHHHHHHHHHhCCCcEEEEcCCChh-----------hHHHHHHHHHh
Confidence 1112233 356788888764 6889999999999887789999999999876 12568888999
Q ss_pred cCCCCcEEEcccccCc--------cChHHHHHHHHccCcEE-EecCCCCCCcHHHHHHHHcCCcEEEcCc-ccccccccc
Q 003726 626 YNLHGQFRWISAQMNR--------VRNGELYRYIADTRGVF-VQPAFYEAFGLTVVEAMTCGLPTFATCH-GGPAEIIEH 695 (800)
Q Consensus 626 ~gL~~~V~flG~~~~~--------v~~~el~~~ia~aadvf-V~PS~~E~fGl~vlEAMA~GlPVIAT~~-GG~~EiI~d 695 (800)
+|+. .+.|.|..... -..+++..+|+. +|++ +.||..|++|.+++|||+||+|||++.. ++..|+++.
T Consensus 285 ~gl~-~~~~~~~~~~~~~~~v~l~~~~~el~~~y~~-aDi~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~ 362 (425)
T PRK05749 285 AGLS-YVRRSQGEPPSADTDVLLGDTMGELGLLYAI-ADIAFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFER 362 (425)
T ss_pred CCCc-EEEccCCCCCCCCCcEEEEecHHHHHHHHHh-CCEEEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHH
Confidence 9885 35555421100 024689999996 9995 5578889999999999999999999864 566776654
Q ss_pred C-ceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003726 696 G-VSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLTLAG 757 (800)
Q Consensus 696 g-~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 757 (800)
. .+|++++++|+++++++|..++ +||+.+++|+++|++.+.++ ...++++++++.
T Consensus 363 ~~~~g~~~~~~d~~~La~~l~~ll----~~~~~~~~m~~~a~~~~~~~---~~~~~~~~~~l~ 418 (425)
T PRK05749 363 LLQAGAAIQVEDAEDLAKAVTYLL----TDPDARQAYGEAGVAFLKQN---QGALQRTLQLLE 418 (425)
T ss_pred HHHCCCeEEECCHHHHHHHHHHHh----cCHHHHHHHHHHHHHHHHhC---ccHHHHHHHHHH
Confidence 3 4688888999999999997766 89999999999999998655 356666666664
No 76
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.91 E-value=7.3e-23 Score=228.90 Aligned_cols=271 Identities=11% Similarity=0.060 Sum_probs=185.0
Q ss_pred HHHHHHHHHhCCCceEEEECCCCchHHHHHHHhcCCCeEEEEecCCccccCCCChhhHHhhhhhhccchhhhHHHHHhcc
Q 003726 384 DASNEIAAELQGVPDLIIGNYSDGNLVATLLSYKLGVTQCNIAHALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNN 463 (800)
Q Consensus 384 ~~~~~ll~~~~~~PDIIh~h~~~~~lva~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~ 463 (800)
..+.+++++ .+||+||++++..++.....++..++|+++++++..... .+..+.
T Consensus 94 ~~l~~~l~~--~~pD~Vi~~~~~~~~~~~~~~~~~~ip~~~~~td~~~~~------------------------~~~~~~ 147 (380)
T PRK13609 94 KRLKLLLQA--EKPDIVINTFPIIAVPELKKQTGISIPTYNVLTDFCLHK------------------------IWVHRE 147 (380)
T ss_pred HHHHHHHHH--hCcCEEEEcChHHHHHHHHHhcCCCCCeEEEeCCCCCCc------------------------ccccCC
Confidence 344455554 489999998776655544445556799886665532110 125678
Q ss_pred CCEEEecCHHHHhhcccCccccccccccccccceeeeccCCCCCCceEEecCCCCCCCCCCCChHHHHHHHhhccccccc
Q 003726 464 ADFIITSTYQEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLL 543 (800)
Q Consensus 464 AD~IIt~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l 543 (800)
+|.++++|+...+... ..|++ .+|+.++++.++.....+.....
T Consensus 148 ad~i~~~s~~~~~~l~--------------------~~gi~--~~ki~v~G~p~~~~f~~~~~~~~-------------- 191 (380)
T PRK13609 148 VDRYFVATDHVKKVLV--------------------DIGVP--PEQVVETGIPIRSSFELKINPDI-------------- 191 (380)
T ss_pred CCEEEECCHHHHHHHH--------------------HcCCC--hhHEEEECcccChHHcCcCCHHH--------------
Confidence 9999999986554210 12443 66888876665443222221111
Q ss_pred cCCccccccccccCCCCCc-EEEEEecCCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHH
Q 003726 544 YDPKQNDEHVGILNDRSKP-LIFSMARLDGVKNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGL 622 (800)
Q Consensus 544 ~~~~~~~~~~Gll~~~~k~-iIl~vGRL~~~Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~l 622 (800)
.++++|+ +++++ ++++.|++...||+..+++++.+. ++++++++|++.. ...++++++
T Consensus 192 -----~~~~~~l--~~~~~~il~~~G~~~~~k~~~~li~~l~~~----~~~~~viv~G~~~----------~~~~~l~~~ 250 (380)
T PRK13609 192 -----IYNKYQL--CPNKKILLIMAGAHGVLGNVKELCQSLMSV----PDLQVVVVCGKNE----------ALKQSLEDL 250 (380)
T ss_pred -----HHHHcCC--CCCCcEEEEEcCCCCCCcCHHHHHHHHhhC----CCcEEEEEeCCCH----------HHHHHHHHH
Confidence 1245676 45555 455668888889999999987642 6789988866432 124567777
Q ss_pred HHHcCCCCcEEEcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcC-cccc----ccccccCc
Q 003726 623 IKQYNLHGQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATC-HGGP----AEIIEHGV 697 (800)
Q Consensus 623 i~~~gL~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~-~GG~----~EiI~dg~ 697 (800)
+++++ ++|.|+|++. ++..+++. +|++|. ++.|++++|||+||+|||+++ .+|. .+.+.+
T Consensus 251 ~~~~~--~~v~~~g~~~------~~~~l~~~-aD~~v~----~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~-- 315 (380)
T PRK13609 251 QETNP--DALKVFGYVE------NIDELFRV-TSCMIT----KPGGITLSEAAALGVPVILYKPVPGQEKENAMYFER-- 315 (380)
T ss_pred HhcCC--CcEEEEechh------hHHHHHHh-ccEEEe----CCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHh--
Confidence 76665 6899999542 57788885 999885 567999999999999999985 5553 233433
Q ss_pred eEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003726 698 SGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLTLAG 757 (800)
Q Consensus 698 ~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 757 (800)
+|+.+.+.|+++++++|.+++ +||+.+++|++++++.. +.++++.+++.+++++.
T Consensus 316 ~G~~~~~~~~~~l~~~i~~ll----~~~~~~~~m~~~~~~~~-~~~s~~~i~~~i~~~~~ 370 (380)
T PRK13609 316 KGAAVVIRDDEEVFAKTEALL----QDDMKLLQMKEAMKSLY-LPEPADHIVDDILAENH 370 (380)
T ss_pred CCcEEEECCHHHHHHHHHHHH----CCHHHHHHHHHHHHHhC-CCchHHHHHHHHHHhhh
Confidence 344445579999999997766 89999999999998765 67899999999998764
No 77
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=99.90 E-value=3.9e-23 Score=204.45 Aligned_cols=160 Identities=32% Similarity=0.540 Sum_probs=143.9
Q ss_pred CCCCcEEEEEecCCCCCCHHHHHHHHHHhhcc-CCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEcc
Q 003726 558 DRSKPLIFSMARLDGVKNLTGLVECYGKSSKL-RELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWIS 636 (800)
Q Consensus 558 ~~~k~iIl~vGRL~~~Kgl~~LleA~~~l~~~-~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG 636 (800)
..++++|+++||+.+.||++.+++++..+.+. .+++.|+|+|.+.. ...+...++.+++..+|.|+|
T Consensus 12 ~~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~i~~~~ 79 (172)
T PF00534_consen 12 PDKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYKLVIVGDGEY------------KKELKNLIEKLNLKENIIFLG 79 (172)
T ss_dssp -TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEEEEEESHCCH------------HHHHHHHHHHTTCGTTEEEEE
T ss_pred CCCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeEEEEEccccc------------ccccccccccccccccccccc
Confidence 67889999999999999999999999999764 68999999996654 577889999999999999999
Q ss_pred cccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHH
Q 003726 637 AQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVAELMIE 716 (800)
Q Consensus 637 ~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~ 716 (800)
..+.+++..++.. +|++|+||..|+||++++|||+||+|||+|+.|+..|++.++.+|+++++.|+++++++|..
T Consensus 80 ----~~~~~~l~~~~~~-~di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~~~g~~~~~~~~~~l~~~i~~ 154 (172)
T PF00534_consen 80 ----YVPDDELDELYKS-SDIFVSPSRNEGFGLSLLEAMACGCPVIASDIGGNNEIINDGVNGFLFDPNDIEELADAIEK 154 (172)
T ss_dssp ----SHSHHHHHHHHHH-TSEEEE-BSSBSS-HHHHHHHHTT-EEEEESSTHHHHHSGTTTSEEEESTTSHHHHHHHHHH
T ss_pred ----ccccccccccccc-ceeccccccccccccccccccccccceeeccccCCceeeccccceEEeCCCCHHHHHHHHHH
Confidence 4556899999997 99999999999999999999999999999999999999999999999999999999999977
Q ss_pred HHHHhcCCHHHHHHHHHHHHHH
Q 003726 717 FFEKCYNDPSHWNKISDGGLKR 738 (800)
Q Consensus 717 ~l~~l~~dp~~~~~ms~~a~~~ 738 (800)
++ .+++.++.|++++++|
T Consensus 155 ~l----~~~~~~~~l~~~~~~~ 172 (172)
T PF00534_consen 155 LL----NDPELRQKLGKNARER 172 (172)
T ss_dssp HH----HHHHHHHHHHHHHHHH
T ss_pred HH----CCHHHHHHHHHHhcCC
Confidence 77 8899999999999975
No 78
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=99.89 E-value=6e-22 Score=239.49 Aligned_cols=321 Identities=13% Similarity=0.134 Sum_probs=216.3
Q ss_pred HHHHHHHHhCCCceEEEECCCCchHHHHHHHhcC-CCeEEEEecCCccccCCCChhhHHhhhhhhccchhhhHHHHHhcc
Q 003726 385 ASNEIAAELQGVPDLIIGNYSDGNLVATLLSYKL-GVTQCNIAHALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNN 463 (800)
Q Consensus 385 ~~~~ll~~~~~~PDIIh~h~~~~~lva~lla~~~-gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~ 463 (800)
.+..+.+..+ .-|+|..|+.+..+++.++.++. ..++.+..|...+ .++++. .+- +-..-...|-.
T Consensus 137 FA~~i~~~~~-~~d~vWvhDYhL~llp~~lR~~~~~~~igfFlHiPFP----s~e~fr-~lp-------~r~~il~gll~ 203 (797)
T PLN03063 137 FLDVVKENYE-EGDVVWCHDYHLMFLPQYLKEYNNKMKVGWFLHTPFP----SSEIYK-TLP-------SRSELLRAVLT 203 (797)
T ss_pred HHHHHHHhcC-CCCEEEEecchhhhHHHHHHHhCCCCcEEEEecCCCC----CHHHHh-hCC-------CHHHHHHHHhc
Confidence 3444444432 33899999999989998888764 4888889998633 333221 110 01122447889
Q ss_pred CCEEEecCHHHHhhcccCccccccccccccccceeeeccCCCCCCceEEecCCCCCCCCCCCChHH---HHHHHhhcccc
Q 003726 464 ADFIITSTYQEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSDKE---KRLIALHGQIE 540 (800)
Q Consensus 464 AD~IIt~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~~k~~VIpnGvD~~~f~p~~~~~---~rl~~~~~~~~ 540 (800)
||.|-..|+..+...-......-. ...+..++ ...|. ..++.++|||+|.+.|.+..... .+...+
T Consensus 204 aDligF~t~~y~r~Fl~~~~r~l~-~~~~~~~i--~~~gr---~~~I~viP~GID~~~f~~~~~~~~~~~~~~~l----- 272 (797)
T PLN03063 204 ADLIGFHTYDFARHFLSACTRILG-VEGTHEGV--VDQGK---VTRVAVFPIGIDPERFINTCELPEVKQHMKEL----- 272 (797)
T ss_pred CCEEEeCCHHHHHHHHHHHHHHhC-ccccCCce--EECCe---EEEEEEEecccCHHHHHHHhcChhHHHHHHHH-----
Confidence 999999998655433221110000 00000110 11121 24788999999999886542211 111000
Q ss_pred ccccCCccccccccccCCCCCcEEEEEecCCCCCCHHHHHHHHHHhhccCCCe----EEEEEeccCCCCCccchHHHHHH
Q 003726 541 DLLYDPKQNDEHVGILNDRSKPLIFSMARLDGVKNLTGLVECYGKSSKLRELV----NLVVVGGYMDVKNSRDREEMAEI 616 (800)
Q Consensus 541 ~~l~~~~~~~~~~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~l~~~~~~v----~LvIVG~g~~~~~~~~~e~~~~~ 616 (800)
++. ..++++|+++||+++.||++.+++||.++.+.+|++ .|+.+++... ...+ +.
T Consensus 273 ---------r~~-----~~~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvLvqia~psr---~~~~----~y 331 (797)
T PLN03063 273 ---------KRF-----FAGRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVMLVQIAVPTR---NDVP----EY 331 (797)
T ss_pred ---------HHh-----cCCCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEEEEEecCCC---CchH----HH
Confidence 011 235789999999999999999999999988777765 3555554321 1111 23
Q ss_pred HHHHHHHHHcC--CC---CcEEEccc--ccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCc----EEEcC
Q 003726 617 EKMHGLIKQYN--LH---GQFRWISA--QMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLP----TFATC 685 (800)
Q Consensus 617 ~~l~~li~~~g--L~---~~V~flG~--~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlP----VIAT~ 685 (800)
+++++.++++. ++ +.+.|.+. ....++.+++..+|+. ||+||+||..||||++++||||||+| +|+|.
T Consensus 332 ~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~-ADvfvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe 410 (797)
T PLN03063 332 QKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAI-TDVMLVTSLRDGMNLVSYEFVACQKAKKGVLVLSE 410 (797)
T ss_pred HHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHHh-CCEEEeCccccccCcchhhHheeecCCCCCEEeeC
Confidence 34444444442 22 23334431 1135788999999996 99999999999999999999999999 99999
Q ss_pred ccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003726 686 HGGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLTLAG 757 (800)
Q Consensus 686 ~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 757 (800)
.+|.++.+ +.+|++++|.|++++|++|.++++ .+++.+++..++.++++ .++||...++.+++-+.
T Consensus 411 ~~G~~~~l--~~~allVnP~D~~~lA~AI~~aL~---m~~~er~~r~~~~~~~v-~~~~~~~Wa~~fl~~l~ 476 (797)
T PLN03063 411 FAGAGQSL--GAGALLVNPWNITEVSSAIKEALN---MSDEERETRHRHNFQYV-KTHSAQKWADDFMSELN 476 (797)
T ss_pred CcCchhhh--cCCeEEECCCCHHHHHHHHHHHHh---CCHHHHHHHHHHHHHhh-hhCCHHHHHHHHHHHHH
Confidence 99999976 557999999999999999988873 48888888889999887 79999999999988664
No 79
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.89 E-value=7e-21 Score=212.87 Aligned_cols=266 Identities=15% Similarity=0.106 Sum_probs=177.3
Q ss_pred hCCCceEEEECCCCchHHHHHHHhcCCCeEEEEecCCccccCCCChhhHHhhhhhhccchhhhHHHHHhccCCEEEecCH
Q 003726 393 LQGVPDLIIGNYSDGNLVATLLSYKLGVTQCNIAHALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNNADFIITSTY 472 (800)
Q Consensus 393 ~~~~PDIIh~h~~~~~lva~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~ 472 (800)
++.+.+|++.+.+....++. ...+.++|+.+++..... +.... .. ...|..+++.||.|+++|+
T Consensus 99 ~~~~~~i~~~~~P~~~~~~~---~~~~~~~Vyd~~D~~~~~-~~~~~---~~---------~~~e~~~~~~ad~vi~~S~ 162 (373)
T cd04950 99 LGFGRPILWYYTPYTLPVAA---LLQASLVVYDCVDDLSAF-PGGPP---EL---------LEAERRLLKRADLVFTTSP 162 (373)
T ss_pred cCCCCcEEEEeCccHHHHHh---hcCCCeEEEEcccchhcc-CCCCH---HH---------HHHHHHHHHhCCEEEECCH
Confidence 35566677776555543333 356788998888754322 11110 00 1346778999999999998
Q ss_pred HHHhhcccCccccccccccccccceeeeccCCCCCCceEEecCCCCCCCCCCCChHHHHHHHhhccccccccCCcccccc
Q 003726 473 QEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLYDPKQNDEH 552 (800)
Q Consensus 473 ~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~ 552 (800)
...+.. . .. .+++.+||||+|.+.|.+....... .+.
T Consensus 163 ~l~~~~----~------------------~~---~~~i~~i~ngvd~~~f~~~~~~~~~-----------------~~~- 199 (373)
T cd04950 163 SLYEAK----R------------------RL---NPNVVLVPNGVDYEHFAAARDPPPP-----------------PAD- 199 (373)
T ss_pred HHHHHH----h------------------hC---CCCEEEcccccCHHHhhcccccCCC-----------------hhH-
Confidence 654411 0 11 2679999999999988764321100 000
Q ss_pred ccccCCCCCcEEEEEecCCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcE
Q 003726 553 VGILNDRSKPLIFSMARLDGVKNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQF 632 (800)
Q Consensus 553 ~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V 632 (800)
....++++++|+|++++.++++.+.+++. ..|+++|+++|++... .... +... .++|
T Consensus 200 ---~~~~~~~~i~y~G~l~~~~d~~ll~~la~----~~p~~~~vliG~~~~~------------~~~~---~~~~-~~nV 256 (373)
T cd04950 200 ---LAALPRPVIGYYGAIAEWLDLELLEALAK----ARPDWSFVLIGPVDVS------------IDPS---ALLR-LPNV 256 (373)
T ss_pred ---HhcCCCCEEEEEeccccccCHHHHHHHHH----HCCCCEEEEECCCcCc------------cChh---Hhcc-CCCE
Confidence 01346789999999999888876655543 3478999999998320 0111 1111 3789
Q ss_pred EEcccccCccChHHHHHHHHccCcEEEecCCC-----CCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCH
Q 003726 633 RWISAQMNRVRNGELYRYIADTRGVFVQPAFY-----EAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHP 707 (800)
Q Consensus 633 ~flG~~~~~v~~~el~~~ia~aadvfV~PS~~-----E~fGl~vlEAMA~GlPVIAT~~GG~~EiI~dg~~G~lv~p~d~ 707 (800)
.|+| .++.+++..+++. +|++++|+.. +++|++++||||||+|||+|+.++. ++.+..++++ ++|+
T Consensus 257 ~~~G----~~~~~~l~~~l~~-~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~~~---~~~~~~~~~~-~~d~ 327 (373)
T cd04950 257 HYLG----PKPYKELPAYLAG-FDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPLPEV---RRYEDEVVLI-ADDP 327 (373)
T ss_pred EEeC----CCCHHHHHHHHHh-CCEEecCCccchhhhcCCcchHHHHhccCCCEEecCcHHH---HhhcCcEEEe-CCCH
Confidence 9999 6677999999996 9999999863 4689999999999999999986544 4444444444 5699
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 003726 708 DQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLTLA 756 (800)
Q Consensus 708 e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly 756 (800)
++++++|.+++. ..++...+ ++.+ +.+.|||+..++++++..
T Consensus 328 ~~~~~ai~~~l~--~~~~~~~~----~~~~-~~~~~sW~~~a~~~~~~l 369 (373)
T cd04950 328 EEFVAAIEKALL--EDGPARER----RRLR-LAAQNSWDARAAEMLEAL 369 (373)
T ss_pred HHHHHHHHHHHh--cCCchHHH----HHHH-HHHHCCHHHHHHHHHHHH
Confidence 999999988652 12222222 1222 568999999999999654
No 80
>TIGR02094 more_P_ylases alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.
Probab=99.89 E-value=1.9e-21 Score=227.72 Aligned_cols=350 Identities=14% Similarity=0.118 Sum_probs=243.9
Q ss_pred HHHHHHHHHHhCCCceEEEECCCCchHHHHHHHhc--------------CCCeEEEEecCCccccC---CCChh------
Q 003726 383 EDASNEIAAELQGVPDLIIGNYSDGNLVATLLSYK--------------LGVTQCNIAHALEKTKY---PDSDL------ 439 (800)
Q Consensus 383 ~~~~~~ll~~~~~~PDIIh~h~~~~~lva~lla~~--------------~gip~v~t~H~l~~~~~---~~s~~------ 439 (800)
..+..+.++.++.+||+||+|.|++++++..+.+. ...+.|+|.|++..... +...+
T Consensus 148 ~~a~l~~l~~l~~~pdviH~ND~Htal~~~el~r~l~~~~~~~~~a~~~~~~~~vfTiHt~~~qG~e~f~~~~~~~~~~~ 227 (601)
T TIGR02094 148 GIGGVRALRALGIDPDVYHLNEGHAAFVTLERIRELIAQGLSFEEAWEAVRKSSLFTTHTPVPAGHDVFPEDLMRKYFGD 227 (601)
T ss_pred HHHHHHHHHHcCCCceEEEeCCchHHHHHHHHHHHHHHcCCCHHHHHHhcCCeEEEeCCCchHHHhhhcCHHHHHHHhhh
Confidence 44444555666789999999999998877765321 13678999999865543 21111
Q ss_pred -------hHHhhh---hhhc-cchhhhHHHHHhccCCEEEecCHHHHhhcccCccccccccccccccceeeeccCCCCCC
Q 003726 440 -------YWRKFE---EKYH-FSSQFTADLTAMNNADFIITSTYQEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFDP 508 (800)
Q Consensus 440 -------~~~~~~---~~y~-f~~~~~~e~~a~~~AD~IIt~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~~ 508 (800)
.+..+. ..+. ...++..-..++..||.|.++|+-..+..++..+.+ + .+.+.-..
T Consensus 228 ~~~~~gl~~~~~~~~~~~~~~~~~~vnm~~lai~~S~~vngVS~lh~~v~~~l~~~l-----------~---~~~~~~~~ 293 (601)
T TIGR02094 228 YAANLGLPREQLLALGRENPDDPEPFNMTVLALRLSRIANGVSKLHGEVSRKMWQFL-----------Y---PGYEEEEV 293 (601)
T ss_pred hhhHhCCCHHHHHhhhhhccCccCceeHHHHHHHhCCeeeeecHHHHHHHHHHHHhh-----------h---hhcccccC
Confidence 000000 0000 001233446789999999999985444221111110 0 01111123
Q ss_pred ceEEecCCCCCCCCCCCChHHHHHHHhhcc---------------------c-cccccCCccccc---------------
Q 003726 509 KFNIVSPGADMCIYFPYSDKEKRLIALHGQ---------------------I-EDLLYDPKQNDE--------------- 551 (800)
Q Consensus 509 k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~---------------------~-~~~l~~~~~~~~--------------- 551 (800)
++.=|.||||...+.|.+...-...-.... + +....++.++.+
T Consensus 294 ~i~gItNGId~~~W~~~~~~~l~~~y~~~~w~~~~~~~~~~~~~~~~~~~~l~~~K~~~K~~L~~~v~~~~~~~~~~~g~ 373 (601)
T TIGR02094 294 PIGYVTNGVHNPTWVAPELRDLYERYLGENWRELLADEELWEAIDDIPDEELWEVHLKLKARLIDYIRRRLRERWLRRGA 373 (601)
T ss_pred CccceeCCccccccCCHHHHHHHHHhCCcchhccchhhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccC
Confidence 578899999999988754322110000000 0 111111111111
Q ss_pred ------cccccCCCCCcEEEEEecCCCCCCHHHHHHHHHHhhccC----CCeEEEEEeccCCCCCccchHHHHHHHHHHH
Q 003726 552 ------HVGILNDRSKPLIFSMARLDGVKNLTGLVECYGKSSKLR----ELVNLVVVGGYMDVKNSRDREEMAEIEKMHG 621 (800)
Q Consensus 552 ------~~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~l~~~~----~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~ 621 (800)
.+|+..+++.+++++++|+...||++++++++.++.+.. .++++|+.|.+.. .|...++.++.+..
T Consensus 374 ~~~~~~~~gl~~dpd~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~pvq~V~~Gka~p----~d~~gk~~i~~i~~ 449 (601)
T TIGR02094 374 DAAILMATDRFLDPDVLTIGFARRFATYKRADLIFRDLERLARILNNPERPVQIVFAGKAHP----ADGEGKEIIQRIVE 449 (601)
T ss_pred cchhhhhhccccCCCCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCc----ccchHHHHHHHHHH
Confidence 456656889999999999999999999999988886421 3699999999965 45666778899999
Q ss_pred HHHHcCCCCcEEEcccccCccChHHHHHHHHccCcEEEe-cCC-CCCCcHHHHHHHHcCCcEEEcCccccccccccCceE
Q 003726 622 LIKQYNLHGQFRWISAQMNRVRNGELYRYIADTRGVFVQ-PAF-YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSG 699 (800)
Q Consensus 622 li~~~gL~~~V~flG~~~~~v~~~el~~~ia~aadvfV~-PS~-~E~fGl~vlEAMA~GlPVIAT~~GG~~EiI~dg~~G 699 (800)
++++...+++|.|+- -.+..+.+.+.+++|++++ ||+ +|+||++-+-||..|.+.+++..|...|.. ++.+|
T Consensus 450 la~~~~~~~kv~f~~-----~Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~nGgL~~sv~DG~~~E~~-~~~nG 523 (601)
T TIGR02094 450 FSKRPEFRGRIVFLE-----NYDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMNGVLNLSILDGWWGEGY-DGDNG 523 (601)
T ss_pred HHhcccCCCCEEEEc-----CCCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHcCCceeecccCcccccC-CCCcE
Confidence 998866678999984 3467888888888999999 999 999999999999999999999999998887 67899
Q ss_pred EEECC------------CCHHHHHHHHHHHH-HHhcCC-----HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 003726 700 FHIDP------------YHPDQVAELMIEFF-EKCYND-----PSHWNKISDGGLKRIYERYTWKIYSERLLTLA 756 (800)
Q Consensus 700 ~lv~p------------~d~e~lA~aI~~~l-~~l~~d-----p~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly 756 (800)
|.|.+ .|++++-++|.+.+ ..+.++ |..|.+|.++|++.....|||++++++|.++|
T Consensus 524 f~f~~~~~~~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~y 598 (601)
T TIGR02094 524 WAIGDGEEYDDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDKF 598 (601)
T ss_pred EEECCCccccccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHh
Confidence 99984 89999999998776 444454 66799999999998777899999999999986
No 81
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=99.87 E-value=8.4e-21 Score=229.23 Aligned_cols=320 Identities=16% Similarity=0.129 Sum_probs=213.0
Q ss_pred HHHHHHHHhCCCceEEEECCCCchHHHHHHHhcC-CCeEEEEecCCccccCCCChhhHHhhhhhhccchhhhHHHHHhcc
Q 003726 385 ASNEIAAELQGVPDLIIGNYSDGNLVATLLSYKL-GVTQCNIAHALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNN 463 (800)
Q Consensus 385 ~~~~ll~~~~~~PDIIh~h~~~~~lva~lla~~~-gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~ 463 (800)
.+..+....+ .-|+|..|+.+..+++..+.++. ..++.+..|...+ .+++... +- ....-...|-.
T Consensus 123 fA~~~~~~~~-~~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlH~pfP----~~~~f~~-lp-------~~~~ll~~ll~ 189 (726)
T PRK14501 123 FAEAIAAIAR-PGDVVWVHDYQLMLLPAMLRERLPDARIGFFLHIPFP----SFEVFRL-LP-------WREEILEGLLG 189 (726)
T ss_pred HHHHHHHhcC-CCCEEEEeCchhhhHHHHHHhhCCCCcEEEEeeCCCC----ChHHHhh-CC-------ChHHHHHHHhc
Confidence 3444444332 34899999999999999887664 4788888897643 2322221 11 11122447889
Q ss_pred CCEEEecCHHHHhhcccCccccccccccccccceeeeccCCCCCCceEEecCCCCCCCCCCCChHH---HHHHHhhcccc
Q 003726 464 ADFIITSTYQEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSDKE---KRLIALHGQIE 540 (800)
Q Consensus 464 AD~IIt~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~~k~~VIpnGvD~~~f~p~~~~~---~rl~~~~~~~~ 540 (800)
+|.|-..|........+.+...-.. -+..+ .....|- ..++.++|||+|.+.|.+..... .+...+
T Consensus 190 ~Dligf~t~~~~r~Fl~~~~~~l~~--~~~~~-~~~~~gr---~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~l----- 258 (726)
T PRK14501 190 ADLIGFHTYDYVRHFLSSVLRVLGY--ETELG-EIRLGGR---IVRVDAFPMGIDYDKFHNSAQDPEVQEEIRRL----- 258 (726)
T ss_pred CCeEEeCCHHHHHHHHHHHHHHcCC--ccCCC-eEEECCE---EEEEEEEECeEcHHHHHHHhcCchHHHHHHHH-----
Confidence 9999998886544322221110000 00000 1111221 23688999999999997643211 111100
Q ss_pred ccccCCccccccccccCCCCCcEEEEEecCCCCCCHHHHHHHHHHhhccCCC----eEEEEEeccCCCCCccchHHHHHH
Q 003726 541 DLLYDPKQNDEHVGILNDRSKPLIFSMARLDGVKNLTGLVECYGKSSKLREL----VNLVVVGGYMDVKNSRDREEMAEI 616 (800)
Q Consensus 541 ~~l~~~~~~~~~~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~l~~~~~~----v~LvIVG~g~~~~~~~~~e~~~~~ 616 (800)
++. .+++++|+++||+++.||+..+++|++++.+.+|+ ++|+++|.+... + -++..+..
T Consensus 259 ---------r~~-----~~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v~~~sr~-~--~~~~~~l~ 321 (726)
T PRK14501 259 ---------RQD-----LRGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQVAVPSRT-G--VPQYQEMK 321 (726)
T ss_pred ---------HHH-----cCCCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCc-c--hHHHHHHH
Confidence 011 24677999999999999999999999998777775 789999854320 0 02222334
Q ss_pred HHHHHHHHHcC-C------CCcEEEcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHc-----CCcEEEc
Q 003726 617 EKMHGLIKQYN-L------HGQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTC-----GLPTFAT 684 (800)
Q Consensus 617 ~~l~~li~~~g-L------~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~-----GlPVIAT 684 (800)
+.+.+++.+.+ . .+.+.+.| .++.+++..+|+. ||+|++||..||||++++||||| |.||+++
T Consensus 322 ~~~~~~v~~in~~~~~~~~~pv~~~~~----~~~~~~l~~ly~~-aDv~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~ 396 (726)
T PRK14501 322 REIDELVGRINGEFGTVDWTPIHYFYR----SLPFEELVALYRA-ADVALVTPLRDGMNLVAKEYVASRTDGDGVLILSE 396 (726)
T ss_pred HHHHHHHHHHHhhcCCCCcceEEEEeC----CCCHHHHHHHHHh-ccEEEecccccccCcccceEEEEcCCCCceEEEec
Confidence 45555554432 1 12234555 6778999999996 99999999999999999999999 5577777
Q ss_pred CccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003726 685 CHGGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLTLAGV 758 (800)
Q Consensus 685 ~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 758 (800)
..|+..+++ .|++++|.|++++|++|.+++. .+++.+....+++++++ .+|||..+++++++.|+.
T Consensus 397 ~~G~~~~l~----~~llv~P~d~~~la~ai~~~l~---~~~~e~~~r~~~~~~~v-~~~~~~~w~~~~l~~l~~ 462 (726)
T PRK14501 397 MAGAAAELA----EALLVNPNDIEGIAAAIKRALE---MPEEEQRERMQAMQERL-RRYDVHKWASDFLDELRE 462 (726)
T ss_pred ccchhHHhC----cCeEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHH
Confidence 788888876 4899999999999999988772 33445555556788887 799999999999998764
No 82
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.87 E-value=2.5e-20 Score=209.88 Aligned_cols=262 Identities=13% Similarity=0.150 Sum_probs=179.3
Q ss_pred CCceEEEECCCCchHHHHHHHhcCCCeEEEEecCCccccCCCChhhHHhhhhhhccchhhhHHHHHhccCCEEEecCHHH
Q 003726 395 GVPDLIIGNYSDGNLVATLLSYKLGVTQCNIAHALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNNADFIITSTYQE 474 (800)
Q Consensus 395 ~~PDIIh~h~~~~~lva~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~e 474 (800)
.+||+||++.+..++.....++..++|+++..++.... . .+..+.+|.+++.|+..
T Consensus 103 ~kPDvVi~~~p~~~~~~l~~~~~~~iP~~~v~td~~~~------~------------------~w~~~~~d~~~v~s~~~ 158 (391)
T PRK13608 103 EKPDLILLTFPTPVMSVLTEQFNINIPVATVMTDYRLH------K------------------NWITPYSTRYYVATKET 158 (391)
T ss_pred hCcCEEEECCcHHHHHHHHHhcCCCCCEEEEeCCCCcc------c------------------ccccCCCCEEEECCHHH
Confidence 49999999866554333333445689986554442110 0 12456899999999876
Q ss_pred HhhcccCccccccccccccccceeeeccCCCCCCceEEecCCCCCCCCCCCChHHHHHHHhhccccccccCCcccccccc
Q 003726 475 IAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLYDPKQNDEHVG 554 (800)
Q Consensus 475 i~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~G 554 (800)
.+.. ...|++ ..++.+++++++.....+..... .++++|
T Consensus 159 ~~~l--------------------~~~gi~--~~ki~v~GiPv~~~f~~~~~~~~-------------------~~~~~~ 197 (391)
T PRK13608 159 KQDF--------------------IDVGID--PSTVKVTGIPIDNKFETPIDQKQ-------------------WLIDNN 197 (391)
T ss_pred HHHH--------------------HHcCCC--HHHEEEECeecChHhcccccHHH-------------------HHHHcC
Confidence 5521 112444 67888988877754332222111 123466
Q ss_pred ccCCCCCcE-EEEEecCCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEE
Q 003726 555 ILNDRSKPL-IFSMARLDGVKNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFR 633 (800)
Q Consensus 555 ll~~~~k~i-Il~vGRL~~~Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~ 633 (800)
+ ++++++ +++.|+++..||++.+++++.+ ..+++++++++|+.. +...++.+.++..++|.
T Consensus 198 l--~~~~~~ilv~~G~lg~~k~~~~li~~~~~---~~~~~~~vvv~G~~~-------------~l~~~l~~~~~~~~~v~ 259 (391)
T PRK13608 198 L--DPDKQTILMSAGAFGVSKGFDTMITDILA---KSANAQVVMICGKSK-------------ELKRSLTAKFKSNENVL 259 (391)
T ss_pred C--CCCCCEEEEECCCcccchhHHHHHHHHHh---cCCCceEEEEcCCCH-------------HHHHHHHHHhccCCCeE
Confidence 6 455554 5678999988999999998642 336789887765432 11223334445557899
Q ss_pred EcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcCc-cc----cccccccCceEEEECCCCHH
Q 003726 634 WISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATCH-GG----PAEIIEHGVSGFHIDPYHPD 708 (800)
Q Consensus 634 flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~~-GG----~~EiI~dg~~G~lv~p~d~e 708 (800)
++|++ +++..+|+. ||++|. .+.|+|+.|||+||+|+|+++. +| ....+.+.+.|+.+ .|++
T Consensus 260 ~~G~~------~~~~~~~~~-aDl~I~----k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~G~g~~~--~~~~ 326 (391)
T PRK13608 260 ILGYT------KHMNEWMAS-SQLMIT----KPGGITISEGLARCIPMIFLNPAPGQELENALYFEEKGFGKIA--DTPE 326 (391)
T ss_pred EEecc------chHHHHHHh-hhEEEe----CCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhCCcEEEe--CCHH
Confidence 99954 368888886 999997 4579999999999999999963 33 22344466667664 4899
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003726 709 QVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLTLAG 757 (800)
Q Consensus 709 ~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 757 (800)
+++++|.+++ +|++.+++|++++++.. +.|+++.+++++++++.
T Consensus 327 ~l~~~i~~ll----~~~~~~~~m~~~~~~~~-~~~s~~~i~~~l~~l~~ 370 (391)
T PRK13608 327 EAIKIVASLT----NGNEQLTNMISTMEQDK-IKYATQTICRDLLDLIG 370 (391)
T ss_pred HHHHHHHHHh----cCHHHHHHHHHHHHHhc-CCCCHHHHHHHHHHHhh
Confidence 9999997766 89999999999999876 67999999999998764
No 83
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.87 E-value=3e-20 Score=208.52 Aligned_cols=263 Identities=14% Similarity=0.159 Sum_probs=183.5
Q ss_pred CCceEEEECCCCc-hHHHHHHHh-----cCCCeEEEEecCCccccCCCChhhHHhhhhhhccchhhhHHHHHhccCCEEE
Q 003726 395 GVPDLIIGNYSDG-NLVATLLSY-----KLGVTQCNIAHALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNNADFII 468 (800)
Q Consensus 395 ~~PDIIh~h~~~~-~lva~lla~-----~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~II 468 (800)
.+||+||++++.. ...+.++++ ..++|++++++++.... ..+..+.+|.++
T Consensus 99 ~~pDvIi~thp~~~~~~~~~l~~~~~~~~~~~p~~~~~tD~~~~~-----------------------~~w~~~~~d~~~ 155 (382)
T PLN02605 99 YKPDIIVSVHPLMQHVPLRVLRWQGKELGKKIPFTTVVTDLGTCH-----------------------PTWFHKGVTRCF 155 (382)
T ss_pred cCcCEEEEeCcCcccCHHHHHHHHhhccCCCCCEEEEECCCCCcC-----------------------cccccCCCCEEE
Confidence 4999999976442 222222332 24789888877652100 012467999999
Q ss_pred ecCHHHHhhcccCccccccccccccccceeeeccCCCCCCceEEecCCCCCCCCCCCChHHHHHHHhhccccccccCCcc
Q 003726 469 TSTYQEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLYDPKQ 548 (800)
Q Consensus 469 t~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~ 548 (800)
++|+...+.. ...|++ .+|+.++++++|.+.+.+..... .
T Consensus 156 ~~s~~~~~~l--------------------~~~g~~--~~ki~v~g~~v~~~f~~~~~~~~------------------~ 195 (382)
T PLN02605 156 CPSEEVAKRA--------------------LKRGLE--PSQIRVYGLPIRPSFARAVRPKD------------------E 195 (382)
T ss_pred ECCHHHHHHH--------------------HHcCCC--HHHEEEECcccCHhhccCCCCHH------------------H
Confidence 9998655421 112444 77999999999876554332211 1
Q ss_pred ccccccccCCCCCcEEEEEecCCCCCCHHHHHHHHHHhhc----cCCCeE-EEEEeccCCCCCccchHHHHHHHHHHHHH
Q 003726 549 NDEHVGILNDRSKPLIFSMARLDGVKNLTGLVECYGKSSK----LRELVN-LVVVGGYMDVKNSRDREEMAEIEKMHGLI 623 (800)
Q Consensus 549 ~~~~~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~l~~----~~~~v~-LvIVG~g~~~~~~~~~e~~~~~~~l~~li 623 (800)
.++.+|+ ++++++|+++|+....|++..+++++..... ..++.+ ++++|.+.. ..+++.+.
T Consensus 196 ~r~~~gl--~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~~-----------~~~~L~~~- 261 (382)
T PLN02605 196 LRRELGM--DEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQVVVICGRNKK-----------LQSKLESR- 261 (382)
T ss_pred HHHHcCC--CCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCceEEEEECCCHH-----------HHHHHHhh-
Confidence 2356787 6788999999999999999999999876431 135565 556665522 12333332
Q ss_pred HHcCCCCcEEEcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcCc------cccccccccCc
Q 003726 624 KQYNLHGQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATCH------GGPAEIIEHGV 697 (800)
Q Consensus 624 ~~~gL~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~~------GG~~EiI~dg~ 697 (800)
....+|+|+|+++ ++..+|+. +|++|.++ .|+|++|||+||+|+|+++. |+. +.+.+++
T Consensus 262 ---~~~~~v~~~G~~~------~~~~l~~a-aDv~V~~~----g~~ti~EAma~g~PvI~~~~~pgqe~gn~-~~i~~~g 326 (382)
T PLN02605 262 ---DWKIPVKVRGFVT------NMEEWMGA-CDCIITKA----GPGTIAEALIRGLPIILNGYIPGQEEGNV-PYVVDNG 326 (382)
T ss_pred ---cccCCeEEEeccc------cHHHHHHh-CCEEEECC----CcchHHHHHHcCCCEEEecCCCccchhhH-HHHHhCC
Confidence 2235799999643 68888886 99999865 48999999999999999984 444 4445566
Q ss_pred eEEEECCCCHHHHHHHHHHHHHHhcCC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 003726 698 SGFHIDPYHPDQVAELMIEFFEKCYND-PSHWNKISDGGLKRIYERYTWKIYSERLLTLA 756 (800)
Q Consensus 698 ~G~lv~p~d~e~lA~aI~~~l~~l~~d-p~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly 756 (800)
.|+.+ .|+++++++|.+++ .| ++.+++|++++++.+ ...+++.+++.+.++.
T Consensus 327 ~g~~~--~~~~~la~~i~~ll----~~~~~~~~~m~~~~~~~~-~~~a~~~i~~~l~~~~ 379 (382)
T PLN02605 327 FGAFS--ESPKEIARIVAEWF----GDKSDELEAMSENALKLA-RPEAVFDIVHDLHELV 379 (382)
T ss_pred ceeec--CCHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhc-CCchHHHHHHHHHHHh
Confidence 77765 69999999998777 66 999999999999887 6788888888887754
No 84
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.87 E-value=3e-20 Score=188.46 Aligned_cols=121 Identities=33% Similarity=0.554 Sum_probs=103.8
Q ss_pred EEecCCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEcccccCccChH
Q 003726 566 SMARLDGVKNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISAQMNRVRNG 645 (800)
Q Consensus 566 ~vGRL~~~Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~~~~~v~~~ 645 (800)
++|++.+.||++.+++++..+.+..++++++++|++.. .....+.+.+++..++|.++|. ++..
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~i~G~~~~------------~~~~~~~~~~~~~~~~v~~~~~----~~~~ 172 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPDLKLVIAGDGPE------------REYLEELLAALLLLDRVIFLGG----LDPE 172 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCCeEEEEEeCCCC------------hHHHHHHHHhcCCcccEEEeCC----CCcH
Confidence 99999999999999999999988788999999999977 3344444677788899999994 3334
Q ss_pred HHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEE
Q 003726 646 ELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHI 702 (800)
Q Consensus 646 el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~~GG~~EiI~dg~~G~lv 702 (800)
+....+.+.+|+++.|+..|++|++++|||+||+|+|+|+.|+..|++.++.+|+++
T Consensus 173 ~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~~~e~i~~~~~g~~~ 229 (229)
T cd01635 173 ELLALLLAAADVFVLPSLREGFGLVVLEAMACGLPVIATDVGGPPEIVEDGLTGLLV 229 (229)
T ss_pred HHHHHHhhcCCEEEecccccCcChHHHHHHhCCCCEEEcCCCCcceEEECCCceEEC
Confidence 445555445999999999999999999999999999999999999999999999874
No 85
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.84 E-value=8.6e-19 Score=185.32 Aligned_cols=290 Identities=25% Similarity=0.342 Sum_probs=210.3
Q ss_pred ceEEEECCCCchH---HHHHHHhcCCCeEEEEecCCccccCCCChhhHHhhhhhhccchhhhHHHHHhccCCEEEecCHH
Q 003726 397 PDLIIGNYSDGNL---VATLLSYKLGVTQCNIAHALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNNADFIITSTYQ 473 (800)
Q Consensus 397 PDIIh~h~~~~~l---va~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 473 (800)
+|++|.+...... .........+.+.+...|....................+.+. .........++.+++.+..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 160 (381)
T COG0438 84 YDIIHAHSLLLAPGGLLALLLLKLLGIPLVVTLHGLIPRILLLPRLLLLLGLLRLLLK---RLKKALRLLADRVIAVSPA 160 (381)
T ss_pred cceeeccccccccchhHHHhhccccCCcEEEeecCCcccccccccchhhHHHHHHHHH---HHHHhccccccEEEECCHH
Confidence 5999987765533 355556666788888888864432211111111111110000 0011112257888888875
Q ss_pred HHhhcccCccccccccccccccceeeeccCCCCCCceEEecCCCCCCCCCCCChHHHHHHHhhccccccccCCccccccc
Q 003726 474 EIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLYDPKQNDEHV 553 (800)
Q Consensus 474 ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~ 553 (800)
.....+ . .. ...++.++||+++...+.+.. .
T Consensus 161 ~~~~~~----~----------------~~---~~~~~~~~~~~~~~~~~~~~~--------------------------~ 191 (381)
T COG0438 161 LKELLE----A----------------LG---VPNKIVVIPNGIDTEKFAPAR--------------------------I 191 (381)
T ss_pred HHHHHH----H----------------hC---CCCCceEecCCcCHHHcCccc--------------------------c
Confidence 322100 0 01 123788999999998877630 1
Q ss_pred cccCCCCCcEEEEEecCCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEE
Q 003726 554 GILNDRSKPLIFSMARLDGVKNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFR 633 (800)
Q Consensus 554 Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~ 633 (800)
++........++++||+.+.||++.+++++..+.+..++++++++|.+... .+.+.+++++++..++|.
T Consensus 192 ~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~-----------~~~~~~~~~~~~~~~~v~ 260 (381)
T COG0438 192 GLLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIKLVIVGDGPER-----------REELEKLAKKLGLEDNVK 260 (381)
T ss_pred CCCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCCeEEEEEcCCCcc-----------HHHHHHHHHHhCCCCcEE
Confidence 111011147899999999999999999999999887667999999999861 245566888888889999
Q ss_pred EcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHH
Q 003726 634 WISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVAEL 713 (800)
Q Consensus 634 flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~~GG~~EiI~dg~~G~lv~p~d~e~lA~a 713 (800)
|.| .++.+++..+++. +|++++||.+|+||++++|||+||+|||+++.|+..+++.++.+|+++++.|.++++++
T Consensus 261 ~~g----~~~~~~~~~~~~~-~~~~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~ 335 (381)
T COG0438 261 FLG----YVPDEELAELLAS-ADVFVLPSLSEGFGLVLLEAMAAGTPVIASDVGGIPEVVEDGETGLLVPPGDVEELADA 335 (381)
T ss_pred Eec----ccCHHHHHHHHHh-CCEEEeccccccchHHHHHHHhcCCcEEECCCCChHHHhcCCCceEecCCCCHHHHHHH
Confidence 998 4445788887775 89999999999999999999999999999999999999988878997877789999999
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003726 714 MIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLTLAGV 758 (800)
Q Consensus 714 I~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 758 (800)
+..++ ++++.++.++..+++.+.+.|+|+..++++.+++..
T Consensus 336 i~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (381)
T COG0438 336 LEQLL----EDPELREELGEAARERVEEEFSWERIAEQLLELYEE 376 (381)
T ss_pred HHHHh----cCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 98877 777888999987777877899999999999988764
No 86
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=99.80 E-value=9.8e-18 Score=191.52 Aligned_cols=314 Identities=12% Similarity=0.056 Sum_probs=215.2
Q ss_pred CceEEEECCCCchHHHHHHHhcC-CCeEEEEecCCccccCCCChhhHHhhhhhhccchhhhHHHHHhccCCEEEecCHHH
Q 003726 396 VPDLIIGNYSDGNLVATLLSYKL-GVTQCNIAHALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNNADFIITSTYQE 474 (800)
Q Consensus 396 ~PDIIh~h~~~~~lva~lla~~~-gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~e 474 (800)
.-|+|..|+.+..+++..+.++. ..++-+..|...+ .+++.. .+- .-..-...|-.||.|=.-|+..
T Consensus 132 ~~d~vWVhDYhL~llp~~LR~~~~~~~IgfFlHiPFP----s~eifr-~LP-------~r~~ll~glL~aDliGFqt~~y 199 (487)
T TIGR02398 132 EGATVWVHDYNLWLVPGYIRQLRPDLKIAFFHHTPFP----SADVFN-ILP-------WREQIIGSLLCCDYIGFHIPRY 199 (487)
T ss_pred CCCEEEEecchhhHHHHHHHHhCCCCeEEEEeeCCCC----ChHHHh-hCC-------chHHHHHHHhcCCeEEeCCHHH
Confidence 34899999999989999887764 3677788887533 232221 110 1112244788999999998866
Q ss_pred HhhcccCccccccccc-cc---cccc---------eeeeccCCCCC--CceEEecCCCCCCCCCCCChH---HHHHHHhh
Q 003726 475 IAGSKNNVGQYENHTA-FT---LPGL---------YRVVHGIDVFD--PKFNIVSPGADMCIYFPYSDK---EKRLIALH 536 (800)
Q Consensus 475 i~~~~~~~gqy~~~~~-f~---~p~l---------~~vv~Gi~v~~--~k~~VIpnGvD~~~f~p~~~~---~~rl~~~~ 536 (800)
++..-+.+...-.... .. .++. ...-.++.... -++.++|.|+|.+.|.+.... ..+..
T Consensus 200 ~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~gr~v~v~~~PiGID~~~f~~~~~~~~~~~~~~--- 276 (487)
T TIGR02398 200 VENFVDAARGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKLGAHPVGTDPERIRSALAAASIREMME--- 276 (487)
T ss_pred HHHHHHHHHHHhCCccccccccccccccccccccccccccceeECCEEEEEEEEECEecHHHHHHHhcCchHHHHHH---
Confidence 6543332221100000 00 0000 00000111111 257889999999998653211 11111
Q ss_pred ccccccccCCccccccccccCCCCCcEEEEEecCCCCCCHHHHHHHHHHhhccCCC----eEEEEEeccCCCCCccchHH
Q 003726 537 GQIEDLLYDPKQNDEHVGILNDRSKPLIFSMARLDGVKNLTGLVECYGKSSKLREL----VNLVVVGGYMDVKNSRDREE 612 (800)
Q Consensus 537 ~~~~~~l~~~~~~~~~~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~l~~~~~~----v~LvIVG~g~~~~~~~~~e~ 612 (800)
..++.+| ++++|++++|++..||+...++||.++.+.+|+ +.|++||.+.. +..++.
T Consensus 277 -----------~lr~~~~-----~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~Pe~~gkv~Lvqi~~psr---~~v~~y 337 (487)
T TIGR02398 277 -----------RIRSELA-----GVKLILSAERVDYTKGILEKLNAYERLLERRPELLGKVTLVTACVPAA---SGMTIY 337 (487)
T ss_pred -----------HHHHHcC-----CceEEEEecccccccCHHHHHHHHHHHHHhCccccCceEEEEEeCCCc---ccchHH
Confidence 1123333 578999999999999999999999999887775 79999998764 222334
Q ss_pred HHHHHHHHHHHHHc-------CCCCcEEEcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCC----cE
Q 003726 613 MAEIEKMHGLIKQY-------NLHGQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGL----PT 681 (800)
Q Consensus 613 ~~~~~~l~~li~~~-------gL~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~Gl----PV 681 (800)
.+..+++++++.+. +..+-+.+.+ .++.+++..+|+. |||++.+|..||++++..|+|+|+. |+
T Consensus 338 ~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~----~v~~~el~alYr~-ADV~lvT~lrDGmNLVa~Eyva~~~~~~GvL 412 (487)
T TIGR02398 338 DELQGQIEQAVGRINGRFARIGWTPLQFFTR----SLPYEEVSAWFAM-ADVMWITPLRDGLNLVAKEYVAAQGLLDGVL 412 (487)
T ss_pred HHHHHHHHHHHHHHhhccCCCCCccEEEEcC----CCCHHHHHHHHHh-CCEEEECccccccCcchhhHHhhhcCCCCCE
Confidence 45566777777664 3344566666 7888999999996 9999999999999999999999998 99
Q ss_pred EEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 003726 682 FATCHGGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLTL 755 (800)
Q Consensus 682 IAT~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~l 755 (800)
|.|..+|..+.+ ..+++|+|.|++++|++|.++++ ..++.+++.-++.++++ .++|....++.++.-
T Consensus 413 ILSefaGaa~~l---~~AllVNP~d~~~~A~ai~~AL~---m~~~Er~~R~~~l~~~v-~~~d~~~W~~~fl~~ 479 (487)
T TIGR02398 413 VLSEFAGAAVEL---KGALLTNPYDPVRMDETIYVALA---MPKAEQQARMREMFDAV-NYYDVQRWADEFLAA 479 (487)
T ss_pred EEeccccchhhc---CCCEEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-hhCCHHHHHHHHHHH
Confidence 999999998766 35899999999999999998884 45556666556666666 788999888887763
No 87
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=99.80 E-value=1e-17 Score=199.67 Aligned_cols=351 Identities=14% Similarity=0.108 Sum_probs=240.7
Q ss_pred HHHHHHHHHHHhCCCceEEEECCCCchHHHH-----HHHhc----------CCCeEEEEecCCccccC---CCChh----
Q 003726 382 AEDASNEIAAELQGVPDLIIGNYSDGNLVAT-----LLSYK----------LGVTQCNIAHALEKTKY---PDSDL---- 439 (800)
Q Consensus 382 ~~~~~~~ll~~~~~~PDIIh~h~~~~~lva~-----lla~~----------~gip~v~t~H~l~~~~~---~~s~~---- 439 (800)
...+..++++.++.+|||||+|.|++++++. ++... .+.+.|+|.|++..... +...+
T Consensus 234 Lg~agl~~Lr~lg~~pdViH~ND~Haal~~lE~~R~ll~~~g~~~~~A~e~vr~~tvFTtHTpvpqG~d~Fp~~l~~~~~ 313 (778)
T cd04299 234 LGIGGVRALRALGIKPTVYHMNEGHAAFLGLERIRELMAEGGLSFDEALEAVRASTVFTTHTPVPAGHDRFPPDLVERYF 313 (778)
T ss_pred HHHHHHHHHHHhCCCCeEEEeCCCcHHHHHHHHHHHHHHHcCCCHHHHHHhhCCeEEEecCCchHHHhhhCCHHHHHHHh
Confidence 3344444556667799999999999988887 55432 14678999999755442 21111
Q ss_pred ---------hHHhhhhhh-cc----chhhhHHHHHhccCCEEEecCHHHHhhcccCccccccccccccccceeeeccCCC
Q 003726 440 ---------YWRKFEEKY-HF----SSQFTADLTAMNNADFIITSTYQEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDV 505 (800)
Q Consensus 440 ---------~~~~~~~~y-~f----~~~~~~e~~a~~~AD~IIt~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v 505 (800)
.+..+...- .+ ..++..-..+++.|+.|.++|+-.-.-+++.+. ....|.+.
T Consensus 314 ~~~~~~lgl~~~~~~~lg~e~~~~~~~~~nM~~laL~~S~~vNgVS~lHg~vsr~mf~--------------~~~~g~p~ 379 (778)
T cd04299 314 GPYARELGLSRDRFLALGRENPGDDPEPFNMAVLALRLAQRANGVSRLHGEVSREMFA--------------GLWPGFPV 379 (778)
T ss_pred hHHHHHcCCCHHHHhhhccccccCccCceeHHHHHHHhcCeeeeecHHHHHHHHHHhh--------------hhhccCCc
Confidence 011000000 00 012334467899999999999843221222111 11123332
Q ss_pred CCCceEEecCCCCCCCCC-CCChHHH---------------------------HHHHhhccccccccCCcc---------
Q 003726 506 FDPKFNIVSPGADMCIYF-PYSDKEK---------------------------RLIALHGQIEDLLYDPKQ--------- 548 (800)
Q Consensus 506 ~~~k~~VIpnGvD~~~f~-p~~~~~~---------------------------rl~~~~~~~~~~l~~~~~--------- 548 (800)
...++.-|.|||+...+. |....-- .+-..|...++-|.....
T Consensus 380 ~~~~i~~ITNGVh~~~W~~P~~~~l~~~~~g~~w~~~~~~~~~~~~~~~i~d~~lw~~K~~~K~~L~~~v~~~~~~~~~~ 459 (778)
T cd04299 380 EEVPIGHVTNGVHVPTWVAPEMRELYDRYLGGDWRERPTDPELWEAVDDIPDEELWEVRQQLRRRLIEFVRRRLRRQWLR 459 (778)
T ss_pred ccCceeceeCCcchhhhcCHHHHHHHHHhcCcchhhccchHHHHhhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 244688899999998887 4211110 000011111111111000
Q ss_pred ------ccccccccCCCCCcEEEEEecCCCCCCHHHHHHHHHHhhcc----CCCeEEEEEeccCCCCCccchHHHHHHHH
Q 003726 549 ------NDEHVGILNDRSKPLIFSMARLDGVKNLTGLVECYGKSSKL----RELVNLVVVGGYMDVKNSRDREEMAEIEK 618 (800)
Q Consensus 549 ------~~~~~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~l~~~----~~~v~LvIVG~g~~~~~~~~~e~~~~~~~ 618 (800)
.-...+..-+++.++|+++.|+..+|+.++++..+.++.+. ...++||+.|.+.. .|...++.++.
T Consensus 460 ~g~~~~~~~~~~~~ldpd~ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~~pvQ~IfaGKAhP----~d~~gK~iIk~ 535 (778)
T cd04299 460 RGASAEEIGEADDVLDPNVLTIGFARRFATYKRATLLLRDPERLKRLLNDPERPVQFIFAGKAHP----ADEPGKELIQE 535 (778)
T ss_pred cCCchhhhhhcCCccCCCccEEeeeecchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCc----cchHHHHHHHH
Confidence 00012444478889999999999999999999988877542 13599999999875 56667888999
Q ss_pred HHHHHHHcCCCCcEEEcccccCccChHHHHHHHHccCcEEEecCC--CCCCcHHHHHHHHcCCcEEEcCccccccccccC
Q 003726 619 MHGLIKQYNLHGQFRWISAQMNRVRNGELYRYIADTRGVFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHG 696 (800)
Q Consensus 619 l~~li~~~gL~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~--~E~fGl~vlEAMA~GlPVIAT~~GG~~EiI~dg 696 (800)
+.+++++....++|.|+- -.+..+.+.+-+++|++++||+ +|++|++-+-||.-|.+.+++-.|...|.. ++
T Consensus 536 i~~~a~~p~~~~kVvfle-----~Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~NG~LnlSvlDGww~E~~-~g 609 (778)
T cd04299 536 IVEFSRRPEFRGRIVFLE-----DYDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAALNGGLNLSVLDGWWDEGY-DG 609 (778)
T ss_pred HHHHHhCcCCCCcEEEEc-----CCCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHcCCeeeecccCcccccc-CC
Confidence 999999777778999984 3457888888888999999999 999999999999999999999999999987 89
Q ss_pred ceEEEECC------------CCHHHHHHHHHHHHH-HhcC-----CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 003726 697 VSGFHIDP------------YHPDQVAELMIEFFE-KCYN-----DPSHWNKISDGGLKRIYERYTWKIYSERLLTLA 756 (800)
Q Consensus 697 ~~G~lv~p------------~d~e~lA~aI~~~l~-~l~~-----dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly 756 (800)
.+||.|.+ .|.+++-+.|.+.+. .+.+ .|..|.+|.+++++.+...|||++++++|.+-|
T Consensus 610 ~nGwaig~~~~~~~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~ 687 (778)
T cd04299 610 ENGWAIGDGDEYEDDEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERF 687 (778)
T ss_pred CCceEeCCCccccChhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHh
Confidence 99999988 677777788865443 4444 388999999999999989999999999998843
No 88
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=99.78 E-value=4.6e-18 Score=189.27 Aligned_cols=275 Identities=15% Similarity=0.104 Sum_probs=177.4
Q ss_pred CCceEEEECCC-CchHHHHHHHhcCCCeEEEEecCCccccCCCChhhHHhhhhhhccchhhhHHHHHhccCCEEEecCHH
Q 003726 395 GVPDLIIGNYS-DGNLVATLLSYKLGVTQCNIAHALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNNADFIITSTYQ 473 (800)
Q Consensus 395 ~~PDIIh~h~~-~~~lva~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 473 (800)
.+||+||+|.. ...+++.++++..|+|++.+-+.+ .+...... |.+.. . ....-+.||.++++|+.
T Consensus 85 ~~pDiv~~~gd~~~~la~a~aa~~~~ipv~h~~~g~-~s~~~~~~--~~~~~------~----r~~~~~~ad~~~~~s~~ 151 (365)
T TIGR00236 85 EKPDIVLVQGDTTTTLAGALAAFYLQIPVGHVEAGL-RTGDRYSP--MPEEI------N----RQLTGHIADLHFAPTEQ 151 (365)
T ss_pred cCCCEEEEeCCchHHHHHHHHHHHhCCCEEEEeCCC-CcCCCCCC--CccHH------H----HHHHHHHHHhccCCCHH
Confidence 48999999964 456788999999999987654443 11000000 11000 0 01123358999999987
Q ss_pred HHhhcccCccccccccccccccceeeeccCCCCCCceEEecCCCCCCCCCCCChHHHHHHHhhccccccccCCccccccc
Q 003726 474 EIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLYDPKQNDEHV 553 (800)
Q Consensus 474 ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~ 553 (800)
..+.. . ..|++ +.++.+++||+....+.+...... ...++.+
T Consensus 152 ~~~~l------------------~--~~G~~--~~~I~vign~~~d~~~~~~~~~~~----------------~~~~~~~ 193 (365)
T TIGR00236 152 AKDNL------------------L--RENVK--ADSIFVTGNTVIDALLTNVEIAYS----------------SPVLSEF 193 (365)
T ss_pred HHHHH------------------H--HcCCC--cccEEEeCChHHHHHHHHHhhccc----------------hhHHHhc
Confidence 65521 1 12444 779999999973322211110000 0111223
Q ss_pred cccCCCCCcEEEEEe-cCC-CCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCc
Q 003726 554 GILNDRSKPLIFSMA-RLD-GVKNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQ 631 (800)
Q Consensus 554 Gll~~~~k~iIl~vG-RL~-~~Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~ 631 (800)
+. +++++++++ |.. ..||++.+++|+.++.+..++++++++|++.. ...+ .+.+..+..++
T Consensus 194 ~~----~~~~vl~~~hr~~~~~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~~----------~~~~---~~~~~~~~~~~ 256 (365)
T TIGR00236 194 GE----DKRYILLTLHRRENVGEPLENIFKAIREIVEEFEDVQIVYPVHLNP----------VVRE---PLHKHLGDSKR 256 (365)
T ss_pred CC----CCCEEEEecCchhhhhhHHHHHHHHHHHHHHHCCCCEEEEECCCCh----------HHHH---HHHHHhCCCCC
Confidence 32 234555544 542 45899999999999877778899999875432 0111 23344556678
Q ss_pred EEEcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEc-CccccccccccCceEEEECCCCHHHH
Q 003726 632 FRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFAT-CHGGPAEIIEHGVSGFHIDPYHPDQV 710 (800)
Q Consensus 632 V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT-~~GG~~EiI~dg~~G~lv~p~d~e~l 710 (800)
|.|+| .+...++..++++ +|+++.+| |..++|||+||+|||++ +.|+..|++.++ +|+++ +.|++++
T Consensus 257 v~~~~----~~~~~~~~~~l~~-ad~vv~~S-----g~~~~EA~a~g~PvI~~~~~~~~~e~~~~g-~~~lv-~~d~~~i 324 (365)
T TIGR00236 257 VHLIE----PLEYLDFLNLAAN-SHLILTDS-----GGVQEEAPSLGKPVLVLRDTTERPETVEAG-TNKLV-GTDKENI 324 (365)
T ss_pred EEEEC----CCChHHHHHHHHh-CCEEEECC-----hhHHHHHHHcCCCEEECCCCCCChHHHhcC-ceEEe-CCCHHHH
Confidence 99998 5566788888886 99999887 66789999999999997 678888988766 56667 4799999
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 003726 711 AELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLT 754 (800)
Q Consensus 711 A~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ 754 (800)
+++|.+++ +|++.+++|++++... .+..+++++++.+.+
T Consensus 325 ~~ai~~ll----~~~~~~~~~~~~~~~~-g~~~a~~ri~~~l~~ 363 (365)
T TIGR00236 325 TKAAKRLL----TDPDEYKKMSNASNPY-GDGEASERIVEELLN 363 (365)
T ss_pred HHHHHHHH----hChHHHHHhhhcCCCC-cCchHHHHHHHHHHh
Confidence 99997766 8999998887766322 234455655555544
No 89
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=99.78 E-value=2.6e-17 Score=181.44 Aligned_cols=245 Identities=14% Similarity=0.124 Sum_probs=165.8
Q ss_pred Cc-eEEEECCCCch---HHHHH--HHhcCCCeEEEEecCCccccCCCChhhHHhhhhhhccchhhhHHHHHhccCCEEEe
Q 003726 396 VP-DLIIGNYSDGN---LVATL--LSYKLGVTQCNIAHALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNNADFIIT 469 (800)
Q Consensus 396 ~P-DIIh~h~~~~~---lva~l--la~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt 469 (800)
++ |+||.+++... +...+ ..++.|+|++.++|++++....... + + ...+...++.||.||+
T Consensus 63 ~~~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~~~~~~---------~-~---~~~~~~~~~~aD~iI~ 129 (333)
T PRK09814 63 KPGDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLRFDSNY---------Y-L---MKEEIDMLNLADVLIV 129 (333)
T ss_pred CCCCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHhccccc---------h-h---hHHHHHHHHhCCEEEE
Confidence 66 99999887542 11222 2234489999999998653211100 0 0 1236678999999999
Q ss_pred cCHHHHhhcccCccccccccccccccceeeeccCCCCCCceEEecCCCCCCCCCCCChHHHHHHHhhccccccccCCccc
Q 003726 470 STYQEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLYDPKQN 549 (800)
Q Consensus 470 ~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~ 549 (800)
.|....+..+ -.|+. ..++.++++..+.....+.
T Consensus 130 ~S~~~~~~l~--------------------~~g~~--~~~i~~~~~~~~~~~~~~~------------------------ 163 (333)
T PRK09814 130 HSKKMKDRLV--------------------EEGLT--TDKIIVQGIFDYLNDIELV------------------------ 163 (333)
T ss_pred CCHHHHHHHH--------------------HcCCC--cCceEeccccccccccccc------------------------
Confidence 9997766321 12332 4567776665433211110
Q ss_pred cccccccCCCCCcEEEEEecCCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCC
Q 003726 550 DEHVGILNDRSKPLIFSMARLDGVKNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLH 629 (800)
Q Consensus 550 ~~~~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~ 629 (800)
. ....++.|+|+|++...+++ . ...++++|+|+|+|+. .+ ...
T Consensus 164 -~-----~~~~~~~i~yaG~l~k~~~l----~------~~~~~~~l~i~G~g~~------------~~---------~~~ 206 (333)
T PRK09814 164 -K-----TPSFQKKINFAGNLEKSPFL----K------NWSQGIKLTVFGPNPE------------DL---------ENS 206 (333)
T ss_pred -c-----cccCCceEEEecChhhchHH----H------hcCCCCeEEEECCCcc------------cc---------ccC
Confidence 0 02345689999999954321 1 1236799999999976 11 245
Q ss_pred CcEEEcccccCccChHHHHHHHHccCcEEEecC-C----------CCCCcHHHHHHHHcCCcEEEcCccccccccccCce
Q 003726 630 GQFRWISAQMNRVRNGELYRYIADTRGVFVQPA-F----------YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVS 698 (800)
Q Consensus 630 ~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS-~----------~E~fGl~vlEAMA~GlPVIAT~~GG~~EiI~dg~~ 698 (800)
++|.|+| .++.+++..+++. |+.+.+. . .-++|.++.|+||||+|||+++.|+..++|+++.+
T Consensus 207 ~~V~f~G----~~~~eel~~~l~~--~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~~~~~~~~V~~~~~ 280 (333)
T PRK09814 207 ANISYKG----WFDPEELPNELSK--GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWSKAAIADFIVENGL 280 (333)
T ss_pred CCeEEec----CCCHHHHHHHHhc--CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECCCccHHHHHHhCCc
Confidence 7999999 6677999999886 4433332 1 13588999999999999999999999999999999
Q ss_pred EEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHH
Q 003726 699 GFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSER 751 (800)
Q Consensus 699 G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ 751 (800)
|++++ +.++++++|.. .+++.+++|++++++.+ +++.-..++++
T Consensus 281 G~~v~--~~~el~~~l~~------~~~~~~~~m~~n~~~~~-~~~~~g~~~~~ 324 (333)
T PRK09814 281 GFVVD--SLEELPEIIDN------ITEEEYQEMVENVKKIS-KLLRNGYFTKK 324 (333)
T ss_pred eEEeC--CHHHHHHHHHh------cCHHHHHHHHHHHHHHH-HHHhcchhHHH
Confidence 99998 67888888855 24577899999999876 56555544444
No 90
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=99.77 E-value=3.8e-17 Score=182.47 Aligned_cols=256 Identities=13% Similarity=0.141 Sum_probs=163.7
Q ss_pred HHHHHHHhCCCceEEEECCCCc-hHHHHHHHhcCCCeEEEEecCCccccCCCChhhHHhhhhhhccchhhhHHHHHhccC
Q 003726 386 SNEIAAELQGVPDLIIGNYSDG-NLVATLLSYKLGVTQCNIAHALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNNA 464 (800)
Q Consensus 386 ~~~ll~~~~~~PDIIh~h~~~~-~lva~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~A 464 (800)
..++++ ..+||+||++.+.+ +......+++.|+|++...|.. .|....... ....+.+
T Consensus 77 ~~~~l~--~~kPdivi~~~~~~~~~~~a~~a~~~~ip~i~~~~~~----------~~~~~~~~~---------~~~~~~~ 135 (380)
T PRK00025 77 LKRRLL--AEPPDVFIGIDAPDFNLRLEKKLRKAGIPTIHYVSPS----------VWAWRQGRA---------FKIAKAT 135 (380)
T ss_pred HHHHHH--HcCCCEEEEeCCCCCCHHHHHHHHHCCCCEEEEeCCc----------hhhcCchHH---------HHHHHHH
Confidence 334444 34999999876542 3322344566799987654431 111000000 1135678
Q ss_pred CEEEecCHHHHhhcccCccccccccccccccceeeeccCCCCCCceEEecCCCCCCCCCCCChHHHHHHHhhcccccccc
Q 003726 465 DFIITSTYQEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLY 544 (800)
Q Consensus 465 D~IIt~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~ 544 (800)
|.|+++|+.+.+. +. -.|+ ++.++.|.+......+....
T Consensus 136 d~i~~~~~~~~~~-------~~-------------~~g~-----~~~~~G~p~~~~~~~~~~~~---------------- 174 (380)
T PRK00025 136 DHVLALFPFEAAF-------YD-------------KLGV-----PVTFVGHPLADAIPLLPDRA---------------- 174 (380)
T ss_pred hhheeCCccCHHH-------HH-------------hcCC-----CeEEECcCHHHhcccccChH----------------
Confidence 9999998754431 10 0121 25555555433221111111
Q ss_pred CCccccccccccCCCCCcEEE-EEe-cCCCC-CCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHH
Q 003726 545 DPKQNDEHVGILNDRSKPLIF-SMA-RLDGV-KNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHG 621 (800)
Q Consensus 545 ~~~~~~~~~Gll~~~~k~iIl-~vG-RL~~~-Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~ 621 (800)
+.++.+|+ ++++++++ +.| |.... ++++.+++++.++.+..++++++++|+++. ..+++.+
T Consensus 175 ---~~~~~l~~--~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~~ii~~~~~~-----------~~~~~~~ 238 (380)
T PRK00025 175 ---AARARLGL--DPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLRFVLPLVNPK-----------RREQIEE 238 (380)
T ss_pred ---HHHHHcCC--CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCChh-----------hHHHHHH
Confidence 11244666 55566654 444 33343 457899999999877778899999987332 1455666
Q ss_pred HHHHc-CCCCcEEEcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEc----------------
Q 003726 622 LIKQY-NLHGQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFAT---------------- 684 (800)
Q Consensus 622 li~~~-gL~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT---------------- 684 (800)
+++++ ++. +.+.. +++..+|+. +|++|.+| |.+.+|||+||+|+|++
T Consensus 239 ~~~~~~~~~--v~~~~--------~~~~~~~~~-aDl~v~~s-----G~~~lEa~a~G~PvI~~~~~~~~~~~~~~~~~~ 302 (380)
T PRK00025 239 ALAEYAGLE--VTLLD--------GQKREAMAA-ADAALAAS-----GTVTLELALLKVPMVVGYKVSPLTFWIAKRLVK 302 (380)
T ss_pred HHhhcCCCC--eEEEc--------ccHHHHHHh-CCEEEECc-----cHHHHHHHHhCCCEEEEEccCHHHHHHHHHHHc
Confidence 67776 553 55442 478888886 99999997 88899999999999987
Q ss_pred -CccccccccccCc--eEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 003726 685 -CHGGPAEIIEHGV--SGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRI 739 (800)
Q Consensus 685 -~~GG~~EiI~dg~--~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v 739 (800)
+.++.++++.++. .+++.+..|++++++++.+++ +|++.+++|++++.+..
T Consensus 303 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ll----~~~~~~~~~~~~~~~~~ 356 (380)
T PRK00025 303 VPYVSLPNLLAGRELVPELLQEEATPEKLARALLPLL----ADGARRQALLEGFTELH 356 (380)
T ss_pred CCeeehHHHhcCCCcchhhcCCCCCHHHHHHHHHHHh----cCHHHHHHHHHHHHHHH
Confidence 5677788887764 557778889999999997776 89999999999875544
No 91
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=99.75 E-value=8.2e-17 Score=178.24 Aligned_cols=251 Identities=15% Similarity=0.170 Sum_probs=166.8
Q ss_pred CCceEEEECCCC-chHHHHHHHhcCCCeEEEEecCCccccCCCChhhHHhhhhhhccchhhhHHHHHhccCCEEEecCHH
Q 003726 395 GVPDLIIGNYSD-GNLVATLLSYKLGVTQCNIAHALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNNADFIITSTYQ 473 (800)
Q Consensus 395 ~~PDIIh~h~~~-~~lva~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 473 (800)
.+||+||+|... ..+.+.++++..|+|++.+.|+... +.... .|... .....+.+|.++++|+.
T Consensus 87 ~~pDvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~s--~~~~~-~~~~~------------r~~~~~~ad~~~~~s~~ 151 (363)
T cd03786 87 EKPDLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLRS--FDRGM-PDEEN------------RHAIDKLSDLHFAPTEE 151 (363)
T ss_pred hCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEeccccc--CCCCC-CchHH------------HHHHHHHhhhccCCCHH
Confidence 389999999644 4567788888899998876665322 10011 11100 01244678999999987
Q ss_pred HHhhcccCccccccccccccccceeeeccCCCCCCceEEecCCC-CCCCCCCCChHHHHHHHhhccccccccCCcccccc
Q 003726 474 EIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFDPKFNIVSPGA-DMCIYFPYSDKEKRLIALHGQIEDLLYDPKQNDEH 552 (800)
Q Consensus 474 ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~~k~~VIpnGv-D~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~ 552 (800)
..+.. ...|++ ..++.+++|++ |...+.+..... ...++.
T Consensus 152 ~~~~l--------------------~~~G~~--~~kI~vign~v~d~~~~~~~~~~~-----------------~~~~~~ 192 (363)
T cd03786 152 ARRNL--------------------LQEGEP--PERIFVVGNTMIDALLRLLELAKK-----------------ELILEL 192 (363)
T ss_pred HHHHH--------------------HHcCCC--cccEEEECchHHHHHHHHHHhhcc-----------------chhhhh
Confidence 65521 112444 77899999985 433222111000 001123
Q ss_pred ccccCCCCCcEEEEEecCCC---CCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCC-
Q 003726 553 VGILNDRSKPLIFSMARLDG---VKNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNL- 628 (800)
Q Consensus 553 ~Gll~~~~k~iIl~vGRL~~---~Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL- 628 (800)
+|+ ++++.++++.||+.. .||++.+++++.++.+. ++.+++.|++.. .+++.+.++++++
T Consensus 193 ~~~--~~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~--~~~vi~~~~~~~------------~~~l~~~~~~~~~~ 256 (363)
T cd03786 193 LGL--LPKKYILVTLHRVENVDDGEQLEEILEALAELAEE--DVPVVFPNHPRT------------RPRIREAGLEFLGH 256 (363)
T ss_pred ccc--CCCCEEEEEeCCccccCChHHHHHHHHHHHHHHhc--CCEEEEECCCCh------------HHHHHHHHHhhccC
Confidence 555 445567778999875 79999999999988643 566666666554 4677777888876
Q ss_pred CCcEEEcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcCc-cccccccccCceEEEECCCCH
Q 003726 629 HGQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATCH-GGPAEIIEHGVSGFHIDPYHP 707 (800)
Q Consensus 629 ~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~~-GG~~EiI~dg~~G~lv~p~d~ 707 (800)
.++|+|+| .....++..+++. ||++|.||- | ++.|||+||+|||+++. +...+.+++| .++.+. .|+
T Consensus 257 ~~~v~~~~----~~~~~~~~~l~~~-ad~~v~~Sg----g-i~~Ea~~~g~PvI~~~~~~~~~~~~~~g-~~~~~~-~~~ 324 (363)
T cd03786 257 HPNVLLIS----PLGYLYFLLLLKN-ADLVLTDSG----G-IQEEASFLGVPVLNLRDRTERPETVESG-TNVLVG-TDP 324 (363)
T ss_pred CCCEEEEC----CcCHHHHHHHHHc-CcEEEEcCc----c-HHhhhhhcCCCEEeeCCCCccchhhhee-eEEecC-CCH
Confidence 67899998 4456788888886 999999984 4 47899999999999964 4455666544 333332 268
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHH
Q 003726 708 DQVAELMIEFFEKCYNDPSHWNKI 731 (800)
Q Consensus 708 e~lA~aI~~~l~~l~~dp~~~~~m 731 (800)
++++++|.+++ +++..+.+|
T Consensus 325 ~~i~~~i~~ll----~~~~~~~~~ 344 (363)
T cd03786 325 EAILAAIEKLL----SDEFAYSLM 344 (363)
T ss_pred HHHHHHHHHHh----cCchhhhcC
Confidence 99999997766 788776665
No 92
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.74 E-value=1.6e-15 Score=160.22 Aligned_cols=388 Identities=17% Similarity=0.240 Sum_probs=243.0
Q ss_pred eEEEEEccCcCCCCccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCC---Cccccccee
Q 003726 268 FNVVIVSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIQNQGLDVIPKILIVTRLIPDAKG---TTCNQRLER 344 (800)
Q Consensus 268 ~rI~ivs~hg~~~~~~~lg~p~tGG~~vyild~araL~~eLa~~L~~~GheV~~~i~VvTr~~p~~~g---~~~~~~~e~ 344 (800)
..|.++-|+.-- .||-++..---+|++.++ -..+. ++|.|..+.-... ....+..+.
T Consensus 44 ktvgfFHPYCNA----------GGGGErVLW~Avr~~q~k------~~n~~----~viYsGD~n~t~~~IL~k~k~~F~i 103 (465)
T KOG1387|consen 44 KTVGFFHPYCNA----------GGGGERVLWKAVRITQRK------FPNNV----IVIYSGDFNVTPENILNKVKNKFDI 103 (465)
T ss_pred eEEEEecccccC----------CCCcceehhHHHHHHHHh------CCCce----EEEEeCCCCCCHHHHHHHHHHhcCc
Confidence 557777665542 367777766666665221 12222 3477766421100 000011222
Q ss_pred ecCCCCeEEEEeccCCCCccccccccccCChhhHHHHHHHHHHHHHH---HhCCCceEEEECCCCchHHHHHHHhcCCCe
Q 003726 345 ISGTEHTHILRVPFRTENGILRKWISRFDVWPYLETFAEDASNEIAA---ELQGVPDLIIGNYSDGNLVATLLSYKLGVT 421 (800)
Q Consensus 345 ~~g~~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~ll~---~~~~~PDIIh~h~~~~~lva~lla~~~gip 421 (800)
.-+.+++..+-+..+. |++ ..-|++..-..+.+...+++ ..+..|||.+-..... +.-.+.++..++|
T Consensus 104 dlDs~nI~Fi~Lk~R~-------lVe-a~~~~hfTllgQaigsmIl~~Eai~r~~Pdi~IDtMGY~-fs~p~~r~l~~~~ 174 (465)
T KOG1387|consen 104 DLDSDNIFFIYLKLRY-------LVE-ASTWKHFTLLGQAIGSMILAFEAIIRFPPDIFIDTMGYP-FSYPIFRRLRRIP 174 (465)
T ss_pred eecccceEEEEEEeee-------eee-cccccceehHHHHHHHHHHHHHHHHhCCchheEecCCCc-chhHHHHHHccCc
Confidence 2233455555554432 333 23454432222333333322 2266899988443322 2222344567899
Q ss_pred EEEEecCCc-cccC-------CCC-hhhHHhhhhhhccchhhhHHHHHhccCCEEEecCHHHHhhcccCccccccccccc
Q 003726 422 QCNIAHALE-KTKY-------PDS-DLYWRKFEEKYHFSSQFTADLTAMNNADFIITSTYQEIAGSKNNVGQYENHTAFT 492 (800)
Q Consensus 422 ~v~t~H~l~-~~~~-------~~s-~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ei~~~~~~~gqy~~~~~f~ 492 (800)
++.-+|-.. .++. +.+ -+.|.++.-...|++-. ..+=..||.|++.|.-.-...+..+
T Consensus 175 V~aYvHYP~iS~DML~~l~qrq~s~~l~~~KlaY~rlFa~lY---~~~G~~ad~vm~NssWT~nHI~qiW---------- 241 (465)
T KOG1387|consen 175 VVAYVHYPTISTDMLKKLFQRQKSGILVWGKLAYWRLFALLY---QSAGSKADIVMTNSSWTNNHIKQIW---------- 241 (465)
T ss_pred eEEEEecccccHHHHHHHHhhhhcchhhhHHHHHHHHHHHHH---HhccccceEEEecchhhHHHHHHHh----------
Confidence 999888521 1110 111 22233222211222211 2355689999999874322111111
Q ss_pred cccceeeeccCCCCCCceEEecCCCCCCCCCCCChHHHHHHHhhccccccccCCccccccccccCCCCCcEEEEEecCCC
Q 003726 493 LPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLYDPKQNDEHVGILNDRSKPLIFSMARLDG 572 (800)
Q Consensus 493 ~p~l~~vv~Gi~v~~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~Gll~~~~k~iIl~vGRL~~ 572 (800)
+ .-++.+|+|..+++... ...+. ...+.+.++++|.+.+
T Consensus 242 -----------~--~~~~~iVyPPC~~e~lk---------------------------s~~~t-e~~r~~~ll~l~Q~RP 280 (465)
T KOG1387|consen 242 -----------Q--SNTCSIVYPPCSTEDLK---------------------------SKFGT-EGERENQLLSLAQFRP 280 (465)
T ss_pred -----------h--ccceeEEcCCCCHHHHH---------------------------HHhcc-cCCcceEEEEEeecCc
Confidence 1 23577888766554211 11111 2456789999999999
Q ss_pred CCCHHHHHHHHHHhhcc------CCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEcccccCccChHH
Q 003726 573 VKNLTGLVECYGKSSKL------RELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISAQMNRVRNGE 646 (800)
Q Consensus 573 ~Kgl~~LleA~~~l~~~------~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~~~~~v~~~e 646 (800)
.||.. +++.++-.... .+.++|++||+... .+..+..+.|+.++++++++++|.|-- .++.++
T Consensus 281 EKnH~-~Lql~Al~~~~~pl~a~~~~iKL~ivGScRn------eeD~ervk~Lkd~a~~L~i~~~v~F~~----N~Py~~ 349 (465)
T KOG1387|consen 281 EKNHK-ILQLFALYLKNEPLEASVSPIKLIIVGSCRN------EEDEERVKSLKDLAEELKIPKHVQFEK----NVPYEK 349 (465)
T ss_pred ccccH-HHHHHHHHHhcCchhhccCCceEEEEeccCC------hhhHHHHHHHHHHHHhcCCccceEEEe----cCCHHH
Confidence 99999 66655543322 35699999999876 344456788999999999999999986 688999
Q ss_pred HHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcCcccc-cccccc--C-ceEEEECCCCHHHHHHHHHHHHHHhc
Q 003726 647 LYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGP-AEIIEH--G-VSGFHIDPYHPDQVAELMIEFFEKCY 722 (800)
Q Consensus 647 l~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~~GG~-~EiI~d--g-~~G~lv~p~d~e~lA~aI~~~l~~l~ 722 (800)
+..++.. |.+.|+.-.-|-||+.++|+||+|+..|+.+.||| -+||.+ | .+||+.+ +.++.|++|.+++.
T Consensus 350 lv~lL~~-a~iGvh~MwNEHFGIsVVEyMAAGlIpi~h~SgGP~lDIV~~~~G~~tGFla~--t~~EYaE~iLkIv~--- 423 (465)
T KOG1387|consen 350 LVELLGK-ATIGVHTMWNEHFGISVVEYMAAGLIPIVHNSGGPLLDIVTPWDGETTGFLAP--TDEEYAEAILKIVK--- 423 (465)
T ss_pred HHHHhcc-ceeehhhhhhhhcchhHHHHHhcCceEEEeCCCCCceeeeeccCCccceeecC--ChHHHHHHHHHHHH---
Confidence 9999996 99999999999999999999999999999999998 456653 3 4799985 67889999988875
Q ss_pred CCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 003726 723 NDPSHWNKISDGGLKRIYERYTWKIYSERLLTLA 756 (800)
Q Consensus 723 ~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly 756 (800)
.|++.+..|.++||..+ .+|+-...-+.+.+.+
T Consensus 424 ~~~~~r~~~r~~AR~s~-~RFsE~~F~kd~~~~i 456 (465)
T KOG1387|consen 424 LNYDERNMMRRNARKSL-ARFGELKFDKDWENPI 456 (465)
T ss_pred cCHHHHHHHHHHHHHHH-HHhhHHHHHHhHhHHH
Confidence 78888999999999887 7999888777777554
No 93
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=99.72 E-value=6.7e-16 Score=186.69 Aligned_cols=318 Identities=13% Similarity=0.148 Sum_probs=210.7
Q ss_pred HHHHHHHHhCCCceEEEECCCCchHHHHHHHhcC-CCeEEEEecCCccccCCCChhhHHhhhhhhccchhhhHHHHHhcc
Q 003726 385 ASNEIAAELQGVPDLIIGNYSDGNLVATLLSYKL-GVTQCNIAHALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNN 463 (800)
Q Consensus 385 ~~~~ll~~~~~~PDIIh~h~~~~~lva~lla~~~-gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~ 463 (800)
.+..+.+..+ .-|+|.+|+.+..+++.++.++. ..++.+..|..++ .++++ +.+- +-..-+..|-.
T Consensus 221 FA~~i~~~~~-~gD~VWVHDYHL~LlP~~LR~~~p~~~IGfFlHiPFP----s~Eif-r~LP-------~r~elL~glL~ 287 (934)
T PLN03064 221 FADVVNEHYE-EGDVVWCHDYHLMFLPKCLKEYNSNMKVGWFLHTPFP----SSEIH-RTLP-------SRSELLRSVLA 287 (934)
T ss_pred HHHHHHHhcC-CCCEEEEecchhhHHHHHHHHhCCCCcEEEEecCCCC----ChHHH-hhCC-------cHHHHHHHHhc
Confidence 3444444332 33899999999999999888765 4788888997633 23222 1111 11223447889
Q ss_pred CCEEEecCHHHHhhcccCccccccccccccccceeeeccCCCCC--CceEEecCCCCCCCCCCCCh---HHHHHHHhhcc
Q 003726 464 ADFIITSTYQEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFD--PKFNIVSPGADMCIYFPYSD---KEKRLIALHGQ 538 (800)
Q Consensus 464 AD~IIt~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~--~k~~VIpnGvD~~~f~p~~~---~~~rl~~~~~~ 538 (800)
||.|-..|+..+...-..+.. +-++-....++.... .++.+.|-|+|.+.|..... ...+...
T Consensus 288 aDlIGFqT~~y~rhFl~~c~r--------lLg~~~~~~~v~~~Gr~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~---- 355 (934)
T PLN03064 288 ADLVGFHTYDYARHFVSACTR--------ILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALETPQVQQHIKE---- 355 (934)
T ss_pred CCeEEeCCHHHHHHHHHHHHH--------HhCccccCCeEEECCEEEEEEEEeCEEcHHHHHHHhcChhHHHHHHH----
Confidence 999999998655532221110 001111111222112 14667899999998864321 1111111
Q ss_pred ccccccCCccccccccccCCCCCcEEEEEecCCCCCCHHHHHHHHHHhhccCCCeE----EEEEeccCCCCCccchHHHH
Q 003726 539 IEDLLYDPKQNDEHVGILNDRSKPLIFSMARLDGVKNLTGLVECYGKSSKLRELVN----LVVVGGYMDVKNSRDREEMA 614 (800)
Q Consensus 539 ~~~~l~~~~~~~~~~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~l~~~~~~v~----LvIVG~g~~~~~~~~~e~~~ 614 (800)
+++.+ .++.+|++++|++..||+...+.||.++.+.+|+++ |+-|..... ...++...
T Consensus 356 ----------lr~~~-----~g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLvQIa~psr---~~v~eY~~ 417 (934)
T PLN03064 356 ----------LKERF-----AGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQIAVPTR---TDVPEYQK 417 (934)
T ss_pred ----------HHHHh-----CCceEEEEeeccccccCHHHHHHHHHHHHHhCccccCCEEEEEEcCCCC---CCcHHHHH
Confidence 11222 356799999999999999999999999877777653 443433221 11122233
Q ss_pred HHHHHHHHHHHcC-CCCc-----EEEcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCC----cEEEc
Q 003726 615 EIEKMHGLIKQYN-LHGQ-----FRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGL----PTFAT 684 (800)
Q Consensus 615 ~~~~l~~li~~~g-L~~~-----V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~Gl----PVIAT 684 (800)
...++.+++.+-+ -.+. |.++. ..++.+++..+|+. ||++++||..|||+++..|||+|+. +.|.|
T Consensus 418 l~~~V~~~V~rIN~~fg~~~w~Pv~~~~---~~l~~eeL~AlY~~-ADV~lvTslrDGmNLva~Eyva~~~~~~GvLILS 493 (934)
T PLN03064 418 LTSQVHEIVGRINGRFGTLTAVPIHHLD---RSLDFHALCALYAV-TDVALVTSLRDGMNLVSYEFVACQDSKKGVLILS 493 (934)
T ss_pred HHHHHHHHHHHHhhhccCCCcceEEEec---cCCCHHHHHHHHHh-CCEEEeCccccccCchHHHHHHhhcCCCCCeEEe
Confidence 3344445444432 1122 44443 35788999999996 9999999999999999999999943 44448
Q ss_pred CccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 003726 685 CHGGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLTL 755 (800)
Q Consensus 685 ~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~l 755 (800)
..+|.++.+ +..+++|+|.|.+++|++|.++++ .+++.++.+.++.++++ .++||..+++.+++-
T Consensus 494 EfaGaa~~L--~~~AllVNP~D~~~vA~AI~~AL~---M~~~Er~~r~~~~~~~V-~~~d~~~Wa~~fl~~ 558 (934)
T PLN03064 494 EFAGAAQSL--GAGAILVNPWNITEVAASIAQALN---MPEEEREKRHRHNFMHV-TTHTAQEWAETFVSE 558 (934)
T ss_pred CCCchHHHh--CCceEEECCCCHHHHHHHHHHHHh---CCHHHHHHHHHHHHhhc-ccCCHHHHHHHHHHH
Confidence 888888887 556899999999999999988873 58999999999999998 789999999997663
No 94
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=99.66 E-value=1.3e-14 Score=168.43 Aligned_cols=170 Identities=14% Similarity=0.175 Sum_probs=147.3
Q ss_pred CCcEEEEEe--cCCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCC--------
Q 003726 560 SKPLIFSMA--RLDGVKNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLH-------- 629 (800)
Q Consensus 560 ~k~iIl~vG--RL~~~Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~-------- 629 (800)
.+..+++++ || +.|.++.+++++.++....|++.|.+.|-+.. ....+.++++++++++.
T Consensus 318 ~~~~~I~v~idrL-~ek~~~~~I~av~~~~~~~p~~~L~~~gy~~~---------~~~~~~l~~~i~~~~~~~~~~~~~~ 387 (519)
T TIGR03713 318 LYETEIGFWIDGL-SDEELQQILQQLLQYILKNPDYELKILTYNND---------NDITQLLEDILEQINEEYNQDKNFF 387 (519)
T ss_pred ccceEEEEEcCCC-ChHHHHHHHHHHHHHHhhCCCeEEEEEEecCc---------hhHHHHHHHHHHHHHhhhchhhhcc
Confidence 344677888 99 99999999999999998999999999998853 01245677777777666
Q ss_pred ---------------------CcEEEcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcCccc
Q 003726 630 ---------------------GQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG 688 (800)
Q Consensus 630 ---------------------~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~~GG 688 (800)
++|.|.|.+. ..++.+.+.. +.++|.+|..|+|+ +.+||+++|+|+| .-|
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~v~f~gy~~----e~dl~~~~~~-arl~id~s~~eg~~-~~ieAiS~GiPqI---nyg 458 (519)
T TIGR03713 388 SLSEQDENQPILQTDEEQKEKERIAFTTLTN----EEDLISALDK-LRLIIDLSKEPDLY-TQISGISAGIPQI---NKV 458 (519)
T ss_pred ccchhhhhhhcccchhhcccccEEEEEecCC----HHHHHHHHhh-heEEEECCCCCChH-HHHHHHHcCCCee---ecC
Confidence 7999998543 3578899987 89999999999999 9999999999999 557
Q ss_pred cccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 003726 689 PAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLTL 755 (800)
Q Consensus 689 ~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~l 755 (800)
+.++|.||.||+++ +|.++++++|..++ .+++.|++++..+.+.+ ++||-+.+.++|.++
T Consensus 459 ~~~~V~d~~NG~li--~d~~~l~~al~~~L----~~~~~wn~~~~~sy~~~-~~yS~~~i~~kW~~~ 518 (519)
T TIGR03713 459 ETDYVEHNKNGYII--DDISELLKALDYYL----DNLKNWNYSLAYSIKLI-DDYSSENIIERLNEL 518 (519)
T ss_pred CceeeEcCCCcEEe--CCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHH-HHhhHHHHHHHHHhh
Confidence 89999999999999 59999999997777 99999999999999998 899999999888764
No 95
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=99.63 E-value=2.2e-14 Score=163.39 Aligned_cols=328 Identities=13% Similarity=0.174 Sum_probs=185.2
Q ss_pred CceEEEECCCCchHHHHHHHhc-CCCeEEEEecCCcccc---------CCC-ChhhHHhhhhhhccchhhhHHHHHhccC
Q 003726 396 VPDLIIGNYSDGNLVATLLSYK-LGVTQCNIAHALEKTK---------YPD-SDLYWRKFEEKYHFSSQFTADLTAMNNA 464 (800)
Q Consensus 396 ~PDIIh~h~~~~~lva~lla~~-~gip~v~t~H~l~~~~---------~~~-s~~~~~~~~~~y~f~~~~~~e~~a~~~A 464 (800)
..-|.|+|-|.++....++.++ ..+..|+|.|+.-... |.. ....+..-...+....+...|+.+-+.|
T Consensus 143 ~~ViaHfHEWmaG~gll~lr~~~~~VaTvFTTHAT~lGR~l~~~~~~~Y~~L~~~~~d~eA~~~~i~~k~~iEraaA~~A 222 (633)
T PF05693_consen 143 PKVIAHFHEWMAGVGLLYLRKRKPDVATVFTTHATLLGRYLAANNKDFYNNLDKFNGDQEAGERNIYHKHSIERAAAHYA 222 (633)
T ss_dssp EEEEEEEESGGGTTHHHHHHHTT-SCEEEEEESS-HHHHHHTTTSS-TTTSGTTS-HHHHHHHTT-HHHHHHHHHHHHHS
T ss_pred CcEEEEechHhHhHHHHHHhccCCCeeEEEEecccchhhHhhcCCCcHHHHhhccCccccccCccchHHHHHHHHHHHhc
Confidence 4457789999986554444443 3588899999832111 110 1112333344455555667899999999
Q ss_pred CEEEecCHHHHhhcccCccccccccccccccceeeeccCCCCCCceEEecCCCCCCCCCCCChHHHHHHHhhccccc---
Q 003726 465 DFIITSTYQEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSDKEKRLIALHGQIED--- 541 (800)
Q Consensus 465 D~IIt~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~--- 541 (800)
|...|+|+-.+...+..+ + ...=.|+|||.|.+.|....+-.+.-..-+..|.+
T Consensus 223 dvFTTVSeITa~Ea~~LL-------------------~----r~pDvV~pNGl~v~~~~~~~efqnl~~~~k~ki~~fv~ 279 (633)
T PF05693_consen 223 DVFTTVSEITAKEAEHLL-------------------K----RKPDVVTPNGLNVDKFPALHEFQNLHAKAKEKIHEFVR 279 (633)
T ss_dssp SEEEESSHHHHHHHHHHH-------------------S----S--SEE----B-GGGTSSTTHHHHHHHHHHHHHHHHHH
T ss_pred CeeeehhhhHHHHHHHHh-------------------C----CCCCEEcCCCccccccccchHHHHHHHHHHHHHHHHHH
Confidence 999999984433211111 0 12235889999999876665433222222223333
Q ss_pred -cccCCccccccccccCCCCCcEEEEEecCC-CCCCHHHHHHHHHHhhcc----CCC---eEEEEEeccCCCCCccchHH
Q 003726 542 -LLYDPKQNDEHVGILNDRSKPLIFSMARLD-GVKNLTGLVECYGKSSKL----REL---VNLVVVGGYMDVKNSRDREE 612 (800)
Q Consensus 542 -~l~~~~~~~~~~Gll~~~~k~iIl~vGRL~-~~Kgl~~LleA~~~l~~~----~~~---v~LvIVG~g~~~~~~~~~e~ 612 (800)
.+++.. .+ ..++..+|++.||.. +.||+|.++||++++... ..+ +-|+|+=... .+...|.
T Consensus 280 ~~f~g~~------df-d~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~~~tVVaFii~pa~~---~~~~ve~ 349 (633)
T PF05693_consen 280 GHFYGHY------DF-DLDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGSDKTVVAFIIVPAKT---NSFNVES 349 (633)
T ss_dssp HHSTT---------S--GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT-S-EEEEEEE---SE---EEE-HHH
T ss_pred HHhcccC------CC-CccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCCCCeEEEEEEecCcc---CCcCHHH
Confidence 223321 12 124567788999998 689999999999997531 223 3344443332 2222221
Q ss_pred HH----------------------------------------------------------------------HHHHHHHH
Q 003726 613 MA----------------------------------------------------------------------EIEKMHGL 622 (800)
Q Consensus 613 ~~----------------------------------------------------------------------~~~~l~~l 622 (800)
.. ..+.+...
T Consensus 350 l~~~a~~~~l~~t~~~i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpILn~ 429 (633)
T PF05693_consen 350 LKGQAVTKQLRDTVDEIQEKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPILNM 429 (633)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHHHH
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHHHH
Confidence 11 12223334
Q ss_pred HHHcCCC----Cc--EEEccc---ccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcCcccccccc
Q 003726 623 IKQYNLH----GQ--FRWISA---QMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEII 693 (800)
Q Consensus 623 i~~~gL~----~~--V~flG~---~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~~GG~~EiI 693 (800)
+++.+|. ++ |.|++. ..+.+-+-+.+.++.. +|+.|+||+||++|.|.+|+.++|+|+|.|+..|....+
T Consensus 430 irr~~L~N~~~drVKVIF~P~yL~~~dgif~l~Y~dfv~G-cdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGFG~~~ 508 (633)
T PF05693_consen 430 IRRLGLFNNPEDRVKVIFHPEYLSGTDGIFNLDYYDFVRG-CDLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGFGCWM 508 (633)
T ss_dssp HHHTT----TT-SEEEEE--S---TTSSSS-S-HHHHHHH-SSEEEE--SSBSS-HHHHHHHHTT--EEEETTBHHHHHH
T ss_pred HHhCCCCCCCCCceEEEEeeccccCCCCCCCCCHHHHhcc-CceeeeccccccccCChHHHhhcCCceeeccchhHHHHH
Confidence 4555552 22 455542 1233445567777775 999999999999999999999999999999999887655
Q ss_pred cc-----CceEEEE---CCCCHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003726 694 EH-----GVSGFHI---DPYHPDQVAELMIEFFEK-CYNDPSHWNKISDGGLKRIYERYTWKIYSERLLTLAGV 758 (800)
Q Consensus 694 ~d-----g~~G~lv---~p~d~e~lA~aI~~~l~~-l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 758 (800)
.+ ...|+.| .-.+.++.++.|.+.+.. |..++..+..+..++. ++.+..+|+.....|.+.|..
T Consensus 509 ~~~~~~~~~~GV~VvdR~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae-~LS~~~dW~~~~~yY~~Ay~~ 581 (633)
T PF05693_consen 509 QEHIEDPEEYGVYVVDRRDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAE-RLSDLADWKNFGKYYEKAYDL 581 (633)
T ss_dssp HTTS-HHGGGTEEEE-SSSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHH-HHGGGGBHHHHCHHHHHHHHH
T ss_pred HHhhccCcCCcEEEEeCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH-HHHHhCCHHHHHHHHHHHHHH
Confidence 42 3456655 345788888888876644 5566777777777665 455899999999999987764
No 96
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=99.58 E-value=4.6e-15 Score=140.84 Aligned_cols=130 Identities=25% Similarity=0.352 Sum_probs=96.8
Q ss_pred CcEEEEEecCCCCCCHHHHHH-HHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEccccc
Q 003726 561 KPLIFSMARLDGVKNLTGLVE-CYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISAQM 639 (800)
Q Consensus 561 k~iIl~vGRL~~~Kgl~~Lle-A~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~~~ 639 (800)
.++|+++|++.+.||++.+++ ++.++.+..|++.|+|+|++++ ++.++ ..++|+|+|
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~l~i~G~~~~--------------~l~~~-----~~~~v~~~g--- 59 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPDIELIIIGNGPD--------------ELKRL-----RRPNVRFHG--- 59 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEEEEEECESS---------------HHCCH-----HHCTEEEE----
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcCEEEEEEeCCHH--------------HHHHh-----cCCCEEEcC---
Confidence 467899999999999999999 9999998889999999999765 23333 235899999
Q ss_pred CccChHHHHHHHHccCcEEEecCC-CCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHH
Q 003726 640 NRVRNGELYRYIADTRGVFVQPAF-YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVAELMIEFF 718 (800)
Q Consensus 640 ~~v~~~el~~~ia~aadvfV~PS~-~E~fGl~vlEAMA~GlPVIAT~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l 718 (800)
.+ +++..+++. +|+++.|+. .++++.+++|||++|+|||+++. +..++++....|.++ ++|+++++++|.+++
T Consensus 60 -~~--~e~~~~l~~-~dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-~~~~~~~~~~~~~~~-~~~~~~l~~~i~~l~ 133 (135)
T PF13692_consen 60 -FV--EELPEILAA-ADVGLIPSRFNEGFPNKLLEAMAAGKPVIASDN-GAEGIVEEDGCGVLV-ANDPEELAEAIERLL 133 (135)
T ss_dssp -S---HHHHHHHHC--SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHH-HCHCHS---SEEEE--TT-HHHHHHHHHHHH
T ss_pred -CH--HHHHHHHHh-CCEEEEEeeCCCcCcHHHHHHHHhCCCEEECCc-chhhheeecCCeEEE-CCCHHHHHHHHHHHh
Confidence 44 589999997 999999986 67899999999999999999988 677777666788888 889999999998776
No 97
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=99.56 E-value=4.7e-13 Score=150.72 Aligned_cols=250 Identities=15% Similarity=0.141 Sum_probs=154.4
Q ss_pred CCCceEEEECCCCc-hHHHHHHHhcCCCeEEEEecCCccccCCCChhhHHhhhhhhccchhhhHHHHHhccCCEEEecCH
Q 003726 394 QGVPDLIIGNYSDG-NLVATLLSYKLGVTQCNIAHALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNNADFIITSTY 472 (800)
Q Consensus 394 ~~~PDIIh~h~~~~-~lva~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~ 472 (800)
+.+||+|++....+ ++.....++.+|+|++..+ ..+-. .|... . -+...+.+|.|+++++
T Consensus 87 ~~kPd~vi~~g~~~~~~~~a~aa~~~gip~v~~i-~P~~w-------aw~~~--~---------~r~l~~~~d~v~~~~~ 147 (385)
T TIGR00215 87 QAKPDLLVGIDAPDFNLTKELKKKDPGIKIIYYI-SPQVW-------AWRKW--R---------AKKIEKATDFLLAILP 147 (385)
T ss_pred hcCCCEEEEeCCCCccHHHHHHHhhCCCCEEEEe-CCcHh-------hcCcc--h---------HHHHHHHHhHhhccCC
Confidence 34999999877654 5555668888999987433 11111 11110 0 1235568999999987
Q ss_pred HHHhhcccCccccccccccccccceeeeccCCCCCCceEEecCCCCCCCCCC-CChHHHHHHHhhccccccccCCccccc
Q 003726 473 QEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFP-YSDKEKRLIALHGQIEDLLYDPKQNDE 551 (800)
Q Consensus 473 ~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~~k~~VIpnGvD~~~f~p-~~~~~~rl~~~~~~~~~~l~~~~~~~~ 551 (800)
.+.+. |.. .| .+..++.|++....... ..... .++
T Consensus 148 ~e~~~-------~~~-------------~g-----~~~~~vGnPv~~~~~~~~~~~~~-------------------~r~ 183 (385)
T TIGR00215 148 FEKAF-------YQK-------------KN-----VPCRFVGHPLLDAIPLYKPDRKS-------------------ARE 183 (385)
T ss_pred CcHHH-------HHh-------------cC-----CCEEEECCchhhhccccCCCHHH-------------------HHH
Confidence 65441 100 11 24556766663332211 11111 124
Q ss_pred cccccCCCCCcEEEEEe--cCCC-CCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCC
Q 003726 552 HVGILNDRSKPLIFSMA--RLDG-VKNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNL 628 (800)
Q Consensus 552 ~~Gll~~~~k~iIl~vG--RL~~-~Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL 628 (800)
.+|+ ++++++|+.+| |..+ .|++..+++++..+.+..|++++++++.+.. ..+.+.++.++++.
T Consensus 184 ~lgl--~~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~~vi~~~~~~-----------~~~~~~~~~~~~~~ 250 (385)
T TIGR00215 184 KLGI--DHNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLRRVLPVVNFK-----------RRLQFEQIKAEYGP 250 (385)
T ss_pred HcCC--CCCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeEEEEEeCCch-----------hHHHHHHHHHHhCC
Confidence 5676 66778776653 6666 7899999999999987778999877654422 13455666677766
Q ss_pred CCcEEEcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcCccc-----------------ccc
Q 003726 629 HGQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG-----------------PAE 691 (800)
Q Consensus 629 ~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~~GG-----------------~~E 691 (800)
..+|.+.+ +++..+|++ ||++|.+| |.+.+|||+||+|+|.+.-.. .+.
T Consensus 251 ~~~v~~~~--------~~~~~~l~a-ADl~V~~S-----Gt~tlEa~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~n 316 (385)
T TIGR00215 251 DLQLHLID--------GDARKAMFA-ADAALLAS-----GTAALEAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPN 316 (385)
T ss_pred CCcEEEEC--------chHHHHHHh-CCEEeecC-----CHHHHHHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccH
Confidence 66777664 245667875 99999998 888889999999999882111 222
Q ss_pred ccccCceEE-EE-CCCCHHHHHHHHHHHHHHhcCCH----HHHHHHHHHHHH
Q 003726 692 IIEHGVSGF-HI-DPYHPDQVAELMIEFFEKCYNDP----SHWNKISDGGLK 737 (800)
Q Consensus 692 iI~dg~~G~-lv-~p~d~e~lA~aI~~~l~~l~~dp----~~~~~ms~~a~~ 737 (800)
++.+....- ++ +.-+++.+++.+.+++ .|+ +.++++.+.-.+
T Consensus 317 il~~~~~~pel~q~~~~~~~l~~~~~~ll----~~~~~~~~~~~~~~~~~~~ 364 (385)
T TIGR00215 317 ILANRLLVPELLQEECTPHPLAIALLLLL----ENGLKAYKEMHRERQFFEE 364 (385)
T ss_pred HhcCCccchhhcCCCCCHHHHHHHHHHHh----cCCcccHHHHHHHHHHHHH
Confidence 232221111 11 2346788888886665 888 877776555443
No 98
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.48 E-value=1.2e-11 Score=131.23 Aligned_cols=381 Identities=17% Similarity=0.130 Sum_probs=231.4
Q ss_pred HHHHHHCCCccccceeEEeCCCCCCCCCcccccceeecCCCCeEEEEeccCCCCccccccccccCChhhHHHHHHHHHHH
Q 003726 309 LLRIQNQGLDVIPKILIVTRLIPDAKGTTCNQRLERISGTEHTHILRVPFRTENGILRKWISRFDVWPYLETFAEDASNE 388 (800)
Q Consensus 309 a~~L~~~GheV~~~i~VvTr~~p~~~g~~~~~~~e~~~g~~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~ 388 (800)
|..|++.|++|+ ++.-.-+ .+.+.+...++++|+.+|-.+......+ .-..+ +.-|.+....-
T Consensus 33 A~Sla~~gf~Vd----liGy~~s--------~p~e~l~~hprI~ih~m~~l~~~~~~p~----~~~l~-lKvf~Qfl~Ll 95 (444)
T KOG2941|consen 33 ALSLAKLGFQVD----LIGYVES--------IPLEELLNHPRIRIHGMPNLPFLQGGPR----VLFLP-LKVFWQFLSLL 95 (444)
T ss_pred HHHHHHcCCeEE----EEEecCC--------CChHHHhcCCceEEEeCCCCcccCCCch----hhhhH-HHHHHHHHHHH
Confidence 456899999999 6643311 1344555567889998876543221111 11111 11122111111
Q ss_pred HHHHhCCCceEEEECCCCc---hHHHHHHHhcCCCeEEEEecCCccccCCCChhhHHhhhhhhc--cchhhhHHHHHhcc
Q 003726 389 IAAELQGVPDLIIGNYSDG---NLVATLLSYKLGVTQCNIAHALEKTKYPDSDLYWRKFEEKYH--FSSQFTADLTAMNN 463 (800)
Q Consensus 389 ll~~~~~~PDIIh~h~~~~---~lva~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~--f~~~~~~e~~a~~~ 463 (800)
+.-...+.||+|....+.+ ..++.+.+...|.+++++.|++.-+- -+..+ ...+| ..+....|.+.=+.
T Consensus 96 ~aL~~~~~~~~ilvQNPP~iPtliv~~~~~~l~~~KfiIDWHNy~Ysl----~l~~~--~g~~h~lV~l~~~~E~~fgk~ 169 (444)
T KOG2941|consen 96 WALFVLRPPDIILVQNPPSIPTLIVCVLYSILTGAKFIIDWHNYGYSL----QLKLK--LGFQHPLVRLVRWLEKYFGKL 169 (444)
T ss_pred HHHHhccCCcEEEEeCCCCCchHHHHHHHHHHhcceEEEEehhhHHHH----HHHhh--cCCCCchHHHHHHHHHHhhcc
Confidence 1111145899999888775 55677777888999999999974320 01110 11111 11223457777889
Q ss_pred CCEEEecCHHHHhhcccCccccccccccccccceeeeccCCCCCCceE--------EecCCCCCCCCCCCChHHHHHHHh
Q 003726 464 ADFIITSTYQEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFDPKFN--------IVSPGADMCIYFPYSDKEKRLIAL 535 (800)
Q Consensus 464 AD~IIt~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~~k~~--------VIpnGvD~~~f~p~~~~~~rl~~~ 535 (800)
||.=.|+|..+.....+.+|--.. .++..-+ +.+-. ..+-+=|...|..... .
T Consensus 170 a~~nLcVT~AMr~dL~qnWgi~ra----------~v~YDrP--ps~~~~l~~~H~lf~~l~~d~~~f~ar~~-------q 230 (444)
T KOG2941|consen 170 ADYNLCVTKAMREDLIQNWGINRA----------KVLYDRP--PSKPTPLDEQHELFMKLAGDHSPFRAREP-------Q 230 (444)
T ss_pred cccchhhHHHHHHHHHHhcCCcee----------EEEecCC--CCCCCchhHHHHHHhhhccccchhhhccc-------c
Confidence 999999999877644444332110 0111000 10000 0011111111111000 0
Q ss_pred hccccccccCCccccccccccCCCCCcEEEEEecCCCCCCHHHHHHHHHHhh-----c--cCCCeEEEEEeccCCCCCcc
Q 003726 536 HGQIEDLLYDPKQNDEHVGILNDRSKPLIFSMARLDGVKNLTGLVECYGKSS-----K--LRELVNLVVVGGYMDVKNSR 608 (800)
Q Consensus 536 ~~~~~~~l~~~~~~~~~~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~l~-----~--~~~~v~LvIVG~g~~~~~~~ 608 (800)
.+.++.-.|.......-.-. ......++++...+++..++..|++|+.... + ..|.+-++|-|.||.
T Consensus 231 ~~~~~~taf~~k~~s~~v~~-~~~~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGKGPl----- 304 (444)
T KOG2941|consen 231 DKALERTAFTKKDASGDVQL-LPERPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGKGPL----- 304 (444)
T ss_pred cchhhhhhHhhhcccchhhh-ccCCCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCCCch-----
Confidence 01111111111111000011 1233446678888999999999999988431 1 247788889999988
Q ss_pred chHHHHHHHHHHHHHHHcCCCCcEEEcccccCccChHHHHHHHHccCcEEEec--CC-CCCCcHHHHHHHHcCCcEEEcC
Q 003726 609 DREEMAEIEKMHGLIKQYNLHGQFRWISAQMNRVRNGELYRYIADTRGVFVQP--AF-YEAFGLTVVEAMTCGLPTFATC 685 (800)
Q Consensus 609 ~~e~~~~~~~l~~li~~~gL~~~V~flG~~~~~v~~~el~~~ia~aadvfV~P--S~-~E~fGl~vlEAMA~GlPVIAT~ 685 (800)
.+++.+.++++++ .+|.+.- ++...++....++. ||..|+- |. .=..|++++...-||+||+|-+
T Consensus 305 -------kE~Y~~~I~~~~~-~~v~~~t---pWL~aEDYP~ll~s-aDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~ 372 (444)
T KOG2941|consen 305 -------KEKYSQEIHEKNL-QHVQVCT---PWLEAEDYPKLLAS-ADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVN 372 (444)
T ss_pred -------hHHHHHHHHHhcc-cceeeee---cccccccchhHhhc-cccceEeeecCcccCcchhHHHhhcCCCceeeec
Confidence 7888899999987 4566554 46667777777774 9887754 32 2348999999999999999999
Q ss_pred ccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Q 003726 686 HGGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLL 753 (800)
Q Consensus 686 ~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll 753 (800)
...+.|+|.|++||++++ |.+++|+.|.-++...-+|.+..+++.+++++. +.+.|+..-++..
T Consensus 373 fkcl~ELVkh~eNGlvF~--Ds~eLa~ql~~lf~~fp~~a~~l~~lkkn~~e~--~e~RW~~~W~~~~ 436 (444)
T KOG2941|consen 373 FKCLDELVKHGENGLVFE--DSEELAEQLQMLFKNFPDNADELNQLKKNLREE--QELRWDESWERTA 436 (444)
T ss_pred chhHHHHHhcCCCceEec--cHHHHHHHHHHHHhcCCCCHHHHHHHHHhhHHH--HhhhHHHHHHHhh
Confidence 999999999999999998 899999999988876777999999999999987 5788886555543
No 99
>PRK10117 trehalose-6-phosphate synthase; Provisional
Probab=99.38 E-value=2.4e-10 Score=130.13 Aligned_cols=321 Identities=13% Similarity=0.081 Sum_probs=209.6
Q ss_pred HHHHHHHHhCCCceEEEECCCCchHHHHHHHhcC-CCeEEEEecCCccccCCCChhhHHhhhhhhccchhhhHHHHHhcc
Q 003726 385 ASNEIAAELQGVPDLIIGNYSDGNLVATLLSYKL-GVTQCNIAHALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNN 463 (800)
Q Consensus 385 ~~~~ll~~~~~~PDIIh~h~~~~~lva~lla~~~-gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~ 463 (800)
.+..+....+ .-|+|..|+.+..+++..+.++. ..++.+..|...+ .+++. ..+- ++ ..-...|-.
T Consensus 113 FA~~v~~~~~-~~D~VWVHDYhL~llp~~LR~~~~~~~IgFFlHiPFP----s~eif-r~LP------~r-~eil~glL~ 179 (474)
T PRK10117 113 LADKLLPLLK-DDDIIWIHDYHLLPFASELRKRGVNNRIGFFLHIPFP----TPEIF-NALP------PH-DELLEQLCD 179 (474)
T ss_pred HHHHHHHhcC-CCCEEEEeccHhhHHHHHHHHhCCCCcEEEEEeCCCC----ChHHH-hhCC------Ch-HHHHHHHHh
Confidence 3334444332 34899999999988888887653 4688888887533 23322 1111 11 122447889
Q ss_pred CCEEEecCHHHHhhcccCccccccccccccccceeeeccCCCCCCceEEecCCCCCCCCCCCChH--HHHHHHhhccccc
Q 003726 464 ADFIITSTYQEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSDK--EKRLIALHGQIED 541 (800)
Q Consensus 464 AD~IIt~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~~k~~VIpnGvD~~~f~p~~~~--~~rl~~~~~~~~~ 541 (800)
||.|=.-|+......-+.+...-. .....+......|- .-++.+.|-|+|.+.|...... ..+..
T Consensus 180 aDlIGFqt~~y~rnFl~~~~~~lg--~~~~~~~~v~~~gr---~v~v~~~PigID~~~~~~~a~~~~~~~~~-------- 246 (474)
T PRK10117 180 YDLLGFQTENDRLAFLDCLSNLTR--VTTRSGKSHTAWGK---AFRTEVYPIGIEPDEIAKQAAGPLPPKLA-------- 246 (474)
T ss_pred CccceeCCHHHHHHHHHHHHHHcC--CcccCCCeEEECCe---EEEEEEEECeEcHHHHHHHhhchHHHHHH--------
Confidence 999999988665533322211100 00001000001111 1257788999998887432111 11111
Q ss_pred cccCCccccccccccCCCCCcEEEEEecCCCCCCHHHHHHHHHHhhccCC----CeEEEEEeccCCCCCccchHHHHHHH
Q 003726 542 LLYDPKQNDEHVGILNDRSKPLIFSMARLDGVKNLTGLVECYGKSSKLRE----LVNLVVVGGYMDVKNSRDREEMAEIE 617 (800)
Q Consensus 542 ~l~~~~~~~~~~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~l~~~~~----~v~LvIVG~g~~~~~~~~~e~~~~~~ 617 (800)
+.++.+ .++.+|+.+-|+|..||+..=++||.++.+.+| ++.|+-++.... +.-.+..+...
T Consensus 247 ------~lr~~~-----~~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~psR---~~v~~Y~~l~~ 312 (474)
T PRK10117 247 ------QLKAEL-----KNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSR---GDVQAYQDIRH 312 (474)
T ss_pred ------HHHHHc-----CCCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCCCC---CccHHHHHHHH
Confidence 111222 356789999999999999999999999877665 477887764332 22333344555
Q ss_pred HHHHHHHHcC-CCCc-----EEEcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCC-----cEEEcCc
Q 003726 618 KMHGLIKQYN-LHGQ-----FRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGL-----PTFATCH 686 (800)
Q Consensus 618 ~l~~li~~~g-L~~~-----V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~Gl-----PVIAT~~ 686 (800)
++.+++.+-+ -.+. |+++- ..++.+++..+|.. ||+++.++..+|+-++..|+.||-. ..|.|..
T Consensus 313 ~v~~~vg~INg~fg~~~w~Pv~y~~---~~~~~~~l~alyr~-ADv~lVTplRDGMNLVAkEyva~q~~~~~GvLILSef 388 (474)
T PRK10117 313 QLETEAGRINGKYGQLGWTPLYYLN---QHFDRKLLMKIFRY-SDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQF 388 (474)
T ss_pred HHHHHHHHHHhccCCCCceeEEEec---CCCCHHHHHHHHHh-ccEEEecccccccccccchheeeecCCCCccEEEecc
Confidence 6666555422 1122 34433 46788999999996 9999999999999999999999965 3788888
Q ss_pred cccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 003726 687 GGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLTLA 756 (800)
Q Consensus 687 GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly 756 (800)
.|.++.+. ..++|+|.|.+++|++|.++++ ..++.+++.-+..++.+ .++|....++.+++-.
T Consensus 389 AGaA~~L~---~AllVNP~d~~~~A~Ai~~AL~---Mp~~Er~~R~~~l~~~v-~~~dv~~W~~~fL~~L 451 (474)
T PRK10117 389 AGAANELT---SALIVNPYDRDEVAAALDRALT---MPLAERISRHAEMLDVI-VKNDINHWQECFISDL 451 (474)
T ss_pred cchHHHhC---CCeEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHh-hhCCHHHHHHHHHHHH
Confidence 88888773 3799999999999999999884 66777777667777776 7889999888888744
No 100
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=99.36 E-value=4.2e-12 Score=113.32 Aligned_cols=92 Identities=25% Similarity=0.502 Sum_probs=85.6
Q ss_pred EEEecCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 003726 657 VFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGL 736 (800)
Q Consensus 657 vfV~PS~~E~fGl~vlEAMA~GlPVIAT~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~ 736 (800)
+++.|+...+++.+++|+||||+|||+++.++..+++.+|..++.++ |+++++++|..++ .||+.+++++++|+
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G~~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~~ll----~~~~~~~~ia~~a~ 74 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACGTPVISDDSPGLREIFEDGEHIITYN--DPEELAEKIEYLL----ENPEERRRIAKNAR 74 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCCCeEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHHHHH----CCHHHHHHHHHHHH
Confidence 46779999999999999999999999999999999999999999998 9999999996665 99999999999999
Q ss_pred HHHHHhCCHHHHHHHHHH
Q 003726 737 KRIYERYTWKIYSERLLT 754 (800)
Q Consensus 737 ~~v~~~ysw~~~a~~ll~ 754 (800)
+.+.++|||+..++++++
T Consensus 75 ~~v~~~~t~~~~~~~il~ 92 (92)
T PF13524_consen 75 ERVLKRHTWEHRAEQILE 92 (92)
T ss_pred HHHHHhCCHHHHHHHHHC
Confidence 999999999999999873
No 101
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=99.32 E-value=2.1e-10 Score=131.81 Aligned_cols=309 Identities=15% Similarity=0.153 Sum_probs=176.3
Q ss_pred CceEEEECCCCchHHHHHHHhcC-CCeEEEEecCCccccCCCChhhHHhhhhhhccchhhhHHHHHhccCCEEEecCHHH
Q 003726 396 VPDLIIGNYSDGNLVATLLSYKL-GVTQCNIAHALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNNADFIITSTYQE 474 (800)
Q Consensus 396 ~PDIIh~h~~~~~lva~lla~~~-gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~e 474 (800)
.-|+|..|+.+..+++.++.++. ..++.+..|..++. +++ ++.+ -....-...|-.||.|-..|+..
T Consensus 141 ~~D~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs----~e~-fr~l-------P~r~eiL~glL~aDlIgFqt~~~ 208 (474)
T PF00982_consen 141 PGDLVWVHDYHLMLLPQMLRERGPDARIGFFLHIPFPS----SEI-FRCL-------PWREEILRGLLGADLIGFQTFEY 208 (474)
T ss_dssp TT-EEEEESGGGTTHHHHHHHTT--SEEEEEE-S--------HHH-HTTS-------TTHHHHHHHHTTSSEEEESSHHH
T ss_pred CCCEEEEeCCcHHHHHHHHHhhcCCceEeeEEecCCCC----HHH-HhhC-------CcHHHHHHHhhcCCEEEEecHHH
Confidence 56899999999988888888775 48888899985332 221 1111 11112244788999999999866
Q ss_pred HhhcccCccccccccccccccceeeec--cCCCC--CCceEEecCCCCCCCCCCCC---hHHHHHHHhhccccccccCCc
Q 003726 475 IAGSKNNVGQYENHTAFTLPGLYRVVH--GIDVF--DPKFNIVSPGADMCIYFPYS---DKEKRLIALHGQIEDLLYDPK 547 (800)
Q Consensus 475 i~~~~~~~gqy~~~~~f~~p~l~~vv~--Gi~v~--~~k~~VIpnGvD~~~f~p~~---~~~~rl~~~~~~~~~~l~~~~ 547 (800)
+...-..+... -++..... ++... .-++.+.|-|+|.+.+.... ....+...+
T Consensus 209 ~~nFl~~~~r~--------lg~~~~~~~~~v~~~Gr~v~v~~~pigId~~~~~~~~~~~~v~~~~~~l------------ 268 (474)
T PF00982_consen 209 ARNFLSCCKRL--------LGLEVDSDRGTVEYNGRRVRVGVFPIGIDPDAFAQLARSPEVQERAEEL------------ 268 (474)
T ss_dssp HHHHHHHHHHH--------S-EEEEETTE-EEETTEEEEEEE------HHHHHHHHH-S---HHHHHH------------
T ss_pred HHHHHHHHHHH--------cCCcccCCCceEEECCEEEEEEEeeccCChHHHHhhccChHHHHHHHHH------------
Confidence 55332222111 01110000 11111 12577789999988764211 111111111
Q ss_pred cccccccccCCCCCcEEEEEecCCCCCCHHHHHHHHHHhhccCC----CeEEEEEeccCCCCCccchHHHHHHHHHHHHH
Q 003726 548 QNDEHVGILNDRSKPLIFSMARLDGVKNLTGLVECYGKSSKLRE----LVNLVVVGGYMDVKNSRDREEMAEIEKMHGLI 623 (800)
Q Consensus 548 ~~~~~~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~l~~~~~----~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li 623 (800)
++.++ .+..+|+.+.|++..||+..=+.||.++.+.+| ++.|+-++.... ....+..+..+++.+++
T Consensus 269 --~~~~~----~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQi~~psr---~~~~~y~~~~~~v~~~v 339 (474)
T PF00982_consen 269 --REKFK----GKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQIAVPSR---EDVPEYQELRREVEELV 339 (474)
T ss_dssp --HHHTT----T-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEEE--B-S---TTSHHHHHHHHHHHHHH
T ss_pred --HHhcC----CCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEEEeeccC---ccchhHHHHHHHHHHHH
Confidence 12221 224899999999999999999999998866554 578888877544 22233334445555554
Q ss_pred HH----cCCCC--cEEEcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCc----EEEcCcccccccc
Q 003726 624 KQ----YNLHG--QFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLP----TFATCHGGPAEII 693 (800)
Q Consensus 624 ~~----~gL~~--~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlP----VIAT~~GG~~EiI 693 (800)
.+ +|-.+ -|.++- ..++.++++.++.. ||+++.+|..+|+.++..|+.+|-.+ +|.|...|..+.+
T Consensus 340 ~~IN~~~g~~~~~PI~~~~---~~~~~~~~~aly~~-aDv~lvTslrDGmNLva~Eyva~q~~~~GvLiLSefaGaa~~L 415 (474)
T PF00982_consen 340 GRINGKYGTPDWTPIIYIY---RSLSFEELLALYRA-ADVALVTSLRDGMNLVAKEYVACQDDNPGVLILSEFAGAAEQL 415 (474)
T ss_dssp HHHHHHH-BTTB-SEEEE----S---HHHHHHHHHH--SEEEE--SSBS--HHHHHHHHHS-TS--EEEEETTBGGGGT-
T ss_pred HHHHhhcccCCceeEEEEe---cCCCHHHHHHHHHh-hhhEEecchhhccCCcceEEEEEecCCCCceEeeccCCHHHHc
Confidence 43 44322 255554 36788999999996 99999999999999999999999665 7778888888887
Q ss_pred ccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 003726 694 EHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLTL 755 (800)
Q Consensus 694 ~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~l 755 (800)
.+ ..++|+|.|.+++|++|.++++ ..++.++..-+..++.+ .++|-...++.+++-
T Consensus 416 ~~--~al~VNP~d~~~~A~ai~~AL~---M~~~Er~~r~~~~~~~v-~~~~~~~W~~~~l~~ 471 (474)
T PF00982_consen 416 SE--AALLVNPWDIEEVADAIHEALT---MPPEERKERHARLREYV-REHDVQWWAESFLRD 471 (474)
T ss_dssp TT--S-EEE-TT-HHHHHHHHHHHHT-----HHHHHHHHHHHHHHH-HHT-HHHHHHHHHHH
T ss_pred CC--ccEEECCCChHHHHHHHHHHHc---CCHHHHHHHHHHHHHHh-HhCCHHHHHHHHHHH
Confidence 43 3489999999999999999884 56777777777777776 788999888888764
No 102
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.26 E-value=4.3e-09 Score=117.30 Aligned_cols=322 Identities=14% Similarity=0.102 Sum_probs=174.6
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCcccccceeecCCCCeEEEEeccCCCCcccccc
Q 003726 289 DTGGQVVYILDQVRALENEMLLRIQNQGLDVIPKILIVTRLIPDAKGTTCNQRLERISGTEHTHILRVPFRTENGILRKW 368 (800)
Q Consensus 289 ~tGG~~vyild~araL~~eLa~~L~~~GheV~~~i~VvTr~~p~~~g~~~~~~~e~~~g~~~v~I~rvp~~~~~~~~~~~ 368 (800)
.|||-..-.+ .++++|+++||+|. ++++...-. .+-+.. .+..+..++...
T Consensus 10 GTGGHi~Pal--------a~a~~l~~~g~~v~----~vg~~~~~e--------~~l~~~-~g~~~~~~~~~~-------- 60 (352)
T PRK12446 10 GSAGHVTPNL--------AIIPYLKEDNWDIS----YIGSHQGIE--------KTIIEK-ENIPYYSISSGK-------- 60 (352)
T ss_pred CcHHHHHHHH--------HHHHHHHhCCCEEE----EEECCCccc--------cccCcc-cCCcEEEEeccC--------
Confidence 3788888777 66777788999998 777553211 011111 134444444322
Q ss_pred ccccCChh---hHHHHHHHH--HHHHHHHhCCCceEEEECCCCchHHHHHHHhcCCCeEEEEecCCccccCCCChhhHHh
Q 003726 369 ISRFDVWP---YLETFAEDA--SNEIAAELQGVPDLIIGNYSDGNLVATLLSYKLGVTQCNIAHALEKTKYPDSDLYWRK 443 (800)
Q Consensus 369 isr~~i~~---yl~~f~~~~--~~~ll~~~~~~PDIIh~h~~~~~lva~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~ 443 (800)
+++...+. ....+.... ...+++ +.+||+||++....+..+.++++.+|+|+++.-.+.. + .
T Consensus 61 l~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~e~n~~----~-------g 127 (352)
T PRK12446 61 LRRYFDLKNIKDPFLVMKGVMDAYVRIR--KLKPDVIFSKGGFVSVPVVIGGWLNRVPVLLHESDMT----P-------G 127 (352)
T ss_pred cCCCchHHHHHHHHHHHHHHHHHHHHHH--hcCCCEEEecCchhhHHHHHHHHHcCCCEEEECCCCC----c-------c
Confidence 11111111 111111111 222333 4499999998877777788999999999755322210 0 0
Q ss_pred hhhhhccchhhhHHHHHhccCCEEEecCHHHHhhcccCccccccccccccccceeeeccCCCCCCceEEecCCCCCCCCC
Q 003726 444 FEEKYHFSSQFTADLTAMNNADFIITSTYQEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYF 523 (800)
Q Consensus 444 ~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~~k~~VIpnGvD~~~f~ 523 (800)
.+.++..+.||.|.++-+.... +++ .+|+.++.|.+..+...
T Consensus 128 -----------~~nr~~~~~a~~v~~~f~~~~~-------------------------~~~--~~k~~~tG~Pvr~~~~~ 169 (352)
T PRK12446 128 -----------LANKIALRFASKIFVTFEEAAK-------------------------HLP--KEKVIYTGSPVREEVLK 169 (352)
T ss_pred -----------HHHHHHHHhhCEEEEEccchhh-------------------------hCC--CCCeEEECCcCCccccc
Confidence 1124467788888765432111 111 35777777777665442
Q ss_pred CCChHHHHHHHhhccccccccCCccccccccccCCCCCcEEEEEecCCCCCCHHH-HHHHHHHhhccCCCeEEEEEeccC
Q 003726 524 PYSDKEKRLIALHGQIEDLLYDPKQNDEHVGILNDRSKPLIFSMARLDGVKNLTG-LVECYGKSSKLRELVNLVVVGGYM 602 (800)
Q Consensus 524 p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~Gll~~~~k~iIl~vGRL~~~Kgl~~-LleA~~~l~~~~~~v~LvIVG~g~ 602 (800)
+..... ++.+|+ ++++++|+.+|.=.-.+.+.. +.+++..+. .+++++++-|..
T Consensus 170 ~~~~~~--------------------~~~~~l--~~~~~~iLv~GGS~Ga~~in~~~~~~l~~l~---~~~~vv~~~G~~ 224 (352)
T PRK12446 170 GNREKG--------------------LAFLGF--SRKKPVITIMGGSLGAKKINETVREALPELL---LKYQIVHLCGKG 224 (352)
T ss_pred ccchHH--------------------HHhcCC--CCCCcEEEEECCccchHHHHHHHHHHHHhhc---cCcEEEEEeCCc
Confidence 221111 133565 566777776654322344433 333444442 247776665543
Q ss_pred CCCCccchHHHHHHHHHHHHHHHcCCCCcEEEcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEE
Q 003726 603 DVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTF 682 (800)
Q Consensus 603 ~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVI 682 (800)
+ .++ ....+ .++...++. .+++..+|+. ||++|.= +=+.|+.|++++|+|.|
T Consensus 225 ~------------~~~---~~~~~---~~~~~~~f~-----~~~m~~~~~~-adlvIsr----~G~~t~~E~~~~g~P~I 276 (352)
T PRK12446 225 N------------LDD---SLQNK---EGYRQFEYV-----HGELPDILAI-TDFVISR----AGSNAIFEFLTLQKPML 276 (352)
T ss_pred h------------HHH---HHhhc---CCcEEecch-----hhhHHHHHHh-CCEEEEC----CChhHHHHHHHcCCCEE
Confidence 2 111 11111 133334432 2468888886 9988874 56789999999999999
Q ss_pred EcCcc-----c----cccccccCceEEEECCC--CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHH
Q 003726 683 ATCHG-----G----PAEIIEHGVSGFHIDPY--HPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSER 751 (800)
Q Consensus 683 AT~~G-----G----~~EiI~dg~~G~lv~p~--d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ 751 (800)
..... + .++.+.+.+.|..+... +++.++++|.+++ .|++.+++ ..+++....-+++
T Consensus 277 ~iP~~~~~~~~~Q~~Na~~l~~~g~~~~l~~~~~~~~~l~~~l~~ll----~~~~~~~~--------~~~~~~~~~aa~~ 344 (352)
T PRK12446 277 LIPLSKFASRGDQILNAESFERQGYASVLYEEDVTVNSLIKHVEELS----HNNEKYKT--------ALKKYNGKEAIQT 344 (352)
T ss_pred EEcCCCCCCCchHHHHHHHHHHCCCEEEcchhcCCHHHHHHHHHHHH----cCHHHHHH--------HHHHcCCCCHHHH
Confidence 88432 1 23345555667666432 5677777776655 78765432 1133455555555
Q ss_pred HHHH
Q 003726 752 LLTL 755 (800)
Q Consensus 752 ll~l 755 (800)
+.++
T Consensus 345 i~~~ 348 (352)
T PRK12446 345 IIDH 348 (352)
T ss_pred HHHH
Confidence 5443
No 103
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.25 E-value=1.6e-08 Score=112.52 Aligned_cols=326 Identities=17% Similarity=0.187 Sum_probs=190.4
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHCCCc-cccceeEEeCCCCCCCCCcccccceeecCCCCeEEEEeccCCCCccccc
Q 003726 289 DTGGQVVYILDQVRALENEMLLRIQNQGLD-VIPKILIVTRLIPDAKGTTCNQRLERISGTEHTHILRVPFRTENGILRK 367 (800)
Q Consensus 289 ~tGG~~vyild~araL~~eLa~~L~~~Ghe-V~~~i~VvTr~~p~~~g~~~~~~~e~~~g~~~v~I~rvp~~~~~~~~~~ 367 (800)
.|||-....+ .+++.|+++|++ |. ++... +. ..+......+..+.-++....
T Consensus 9 GTGGHv~pAl--------Al~~~l~~~g~~~v~----~~~~~--~~-------~e~~l~~~~~~~~~~I~~~~~------ 61 (357)
T COG0707 9 GTGGHVFPAL--------ALAEELAKRGWEQVI----VLGTG--DG-------LEAFLVKQYGIEFELIPSGGL------ 61 (357)
T ss_pred CCccchhHHH--------HHHHHHHhhCccEEE----Eeccc--cc-------ceeeeccccCceEEEEecccc------
Confidence 3688877777 677888999997 33 43222 11 111111112455555554432
Q ss_pred cccccCChhhH-----HHHHHHHHHHHHHHhCCCceEEEECCCCchHHHHHHHhcCCCeEEEEecCCccccCCCChhhHH
Q 003726 368 WISRFDVWPYL-----ETFAEDASNEIAAELQGVPDLIIGNYSDGNLVATLLSYKLGVTQCNIAHALEKTKYPDSDLYWR 442 (800)
Q Consensus 368 ~isr~~i~~yl-----~~f~~~~~~~ll~~~~~~PDIIh~h~~~~~lva~lla~~~gip~v~t~H~l~~~~~~~s~~~~~ 442 (800)
.+...+..+ ........+.++++. +||+|.+........+.+++..+|+|+++.-.+.-. ...|+
T Consensus 62 --~~~~~~~~~~~~~~~~~~~~~a~~il~~~--kPd~vig~Ggyvs~P~~~Aa~~~~iPv~ihEqn~~~------G~ank 131 (357)
T COG0707 62 --RRKGSLKLLKAPFKLLKGVLQARKILKKL--KPDVVIGTGGYVSGPVGIAAKLLGIPVIIHEQNAVP------GLANK 131 (357)
T ss_pred --cccCcHHHHHHHHHHHHHHHHHHHHHHHc--CCCEEEecCCccccHHHHHHHhCCCCEEEEecCCCc------chhHH
Confidence 112222211 111222344555544 999999988888888889999999998776555422 11222
Q ss_pred hhhhhhccchhhhHHHHHhccCCEEEecCHHHHhhcccCccccccccccccccceeeeccCCCCCCceEEecCCCCCCCC
Q 003726 443 KFEEKYHFSSQFTADLTAMNNADFIITSTYQEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIY 522 (800)
Q Consensus 443 ~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~~k~~VIpnGvD~~~f 522 (800)
+..+.|+.|.+.-.. .. .+.+ +.++.++.|.+..+..
T Consensus 132 ----------------~~~~~a~~V~~~f~~-~~------------------------~~~~--~~~~~~tG~Pvr~~~~ 168 (357)
T COG0707 132 ----------------ILSKFAKKVASAFPK-LE------------------------AGVK--PENVVVTGIPVRPEFE 168 (357)
T ss_pred ----------------HhHHhhceeeecccc-cc------------------------ccCC--CCceEEecCcccHHhh
Confidence 244466666443321 10 1122 5578888887777666
Q ss_pred CCCChHHHHHHHhhccccccccCCccccccccccCCCCCcEEEEEec-CCCCCCHHHHH-HHHHHhhccCCCeEEEEEec
Q 003726 523 FPYSDKEKRLIALHGQIEDLLYDPKQNDEHVGILNDRSKPLIFSMAR-LDGVKNLTGLV-ECYGKSSKLRELVNLVVVGG 600 (800)
Q Consensus 523 ~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~Gll~~~~k~iIl~vGR-L~~~Kgl~~Ll-eA~~~l~~~~~~v~LvIVG~ 600 (800)
. ......+. .+ ..++++|+.+|. ....+ +..++ ++..++.+ +++++...+
T Consensus 169 ~-~~~~~~~~--------------------~~---~~~~~~ilV~GGS~Ga~~-ln~~v~~~~~~l~~---~~~v~~~~G 220 (357)
T COG0707 169 E-LPAAEVRK--------------------DG---RLDKKTILVTGGSQGAKA-LNDLVPEALAKLAN---RIQVIHQTG 220 (357)
T ss_pred c-cchhhhhh--------------------hc---cCCCcEEEEECCcchhHH-HHHHHHHHHHHhhh---CeEEEEEcC
Confidence 4 22222211 11 126677776665 33333 33333 33333332 577777666
Q ss_pred cCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCc
Q 003726 601 YMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLP 680 (800)
Q Consensus 601 g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlP 680 (800)
... .+++...-.+++. ++..++. +++..+|+. ||+.|.= +=++|+-|..++|+|
T Consensus 221 ~~~------------~~~~~~~~~~~~~---~~v~~f~------~dm~~~~~~-ADLvIsR----aGa~Ti~E~~a~g~P 274 (357)
T COG0707 221 KND------------LEELKSAYNELGV---VRVLPFI------DDMAALLAA-ADLVISR----AGALTIAELLALGVP 274 (357)
T ss_pred cch------------HHHHHHHHhhcCc---EEEeeHH------hhHHHHHHh-ccEEEeC----CcccHHHHHHHhCCC
Confidence 543 3444444444443 7777643 468999996 9999874 457999999999999
Q ss_pred EEEcCcccc--------ccccccCceEEEECCCC--HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHH
Q 003726 681 TFATCHGGP--------AEIIEHGVSGFHIDPYH--PDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSE 750 (800)
Q Consensus 681 VIAT~~GG~--------~EiI~dg~~G~lv~p~d--~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~ 750 (800)
+|--..+.. +..+++.+.|..++-.+ ++.+++.|.+++ .+|+..++|++++++.. ..=.-+.+++
T Consensus 275 ~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~~~~lt~~~l~~~i~~l~----~~~~~l~~m~~~a~~~~-~p~aa~~i~~ 349 (357)
T COG0707 275 AILVPYPPGADGHQEYNAKFLEKAGAALVIRQSELTPEKLAELILRLL----SNPEKLKAMAENAKKLG-KPDAAERIAD 349 (357)
T ss_pred EEEeCCCCCccchHHHHHHHHHhCCCEEEeccccCCHHHHHHHHHHHh----cCHHHHHHHHHHHHhcC-CCCHHHHHHH
Confidence 998754433 34455666777776544 778888886666 89999999999988764 2333333444
Q ss_pred HHH
Q 003726 751 RLL 753 (800)
Q Consensus 751 ~ll 753 (800)
.++
T Consensus 350 ~~~ 352 (357)
T COG0707 350 LLL 352 (357)
T ss_pred HHH
Confidence 433
No 104
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=99.24 E-value=7.2e-11 Score=115.41 Aligned_cols=167 Identities=15% Similarity=0.146 Sum_probs=83.3
Q ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCcccccceeecCCCCeEEEEeccCCCCccccc
Q 003726 288 PDTGGQVVYILDQVRALENEMLLRIQNQGLDVIPKILIVTRLIPDAKGTTCNQRLERISGTEHTHILRVPFRTENGILRK 367 (800)
Q Consensus 288 p~tGG~~vyild~araL~~eLa~~L~~~GheV~~~i~VvTr~~p~~~g~~~~~~~e~~~g~~~v~I~rvp~~~~~~~~~~ 367 (800)
+..||.+.++. +|+++|+++||+|+ |+|....+..... ........+....
T Consensus 9 ~~~GG~e~~~~--------~l~~~l~~~G~~v~----v~~~~~~~~~~~~-----------~~~~~~~~~~~~~------ 59 (177)
T PF13439_consen 9 PNIGGAERVVL--------NLARALAKRGHEVT----VVSPGVKDPIEEE-----------LVKIFVKIPYPIR------ 59 (177)
T ss_dssp TSSSHHHHHHH--------HHHHHHHHTT-EEE----EEESS-TTS-SST-----------EEEE---TT-SST------
T ss_pred CCCChHHHHHH--------HHHHHHHHCCCEEE----EEEcCCCccchhh-----------ccceeeeeecccc------
Confidence 34699999999 66667799999999 8877644432110 0011111111110
Q ss_pred cccccCChhhHHHHHHHHHHHHHHHhCCCceEEEECCCCchHHHHHHHhcCCCeEEEEecCCccc--cCCCChhhHHhhh
Q 003726 368 WISRFDVWPYLETFAEDASNEIAAELQGVPDLIIGNYSDGNLVATLLSYKLGVTQCNIAHALEKT--KYPDSDLYWRKFE 445 (800)
Q Consensus 368 ~isr~~i~~yl~~f~~~~~~~ll~~~~~~PDIIh~h~~~~~lva~lla~~~gip~v~t~H~l~~~--~~~~s~~~~~~~~ 445 (800)
....+...+ ......+++.. +|||||+|.+.....+.+... ++|.|.+.|+.... ...........+.
T Consensus 60 -----~~~~~~~~~-~~~~~~~i~~~--~~DiVh~~~~~~~~~~~~~~~--~~~~v~~~H~~~~~~~~~~~~~~~~~~~~ 129 (177)
T PF13439_consen 60 -----KRFLRSFFF-MRRLRRLIKKE--KPDIVHIHGPPAFWIALLACR--KVPIVYTIHGPYFERRFLKSKLSPYSYLN 129 (177)
T ss_dssp -----SS--HHHHH-HHHHHHHHHHH--T-SEEECCTTHCCCHHHHHHH--CSCEEEEE-HHH--HHTTTTSCCCHHHHH
T ss_pred -----cccchhHHH-HHHHHHHHHHc--CCCeEEecccchhHHHHHhcc--CCCEEEEeCCCcccccccccccchhhhhh
Confidence 011111112 22333444433 999999998776444444444 99999999986521 1000000001110
Q ss_pred hhhccchhhhHHHHHhccCCEEEecCHHHHhhcccCccccccccccccccceeeeccCCCCCCceEEecCCCCCCCCC
Q 003726 446 EKYHFSSQFTADLTAMNNADFIITSTYQEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYF 523 (800)
Q Consensus 446 ~~y~f~~~~~~e~~a~~~AD~IIt~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~~k~~VIpnGvD~~~f~ 523 (800)
. ..+....+.+|.+||+|....+...+ .|++ +.|+.|||||+|++.|.
T Consensus 130 ~--------~~~~~~~~~~~~ii~vS~~~~~~l~~--------------------~~~~--~~ki~vI~ngid~~~F~ 177 (177)
T PF13439_consen 130 F--------RIERKLYKKADRIIAVSESTKDELIK--------------------FGIP--PEKIHVIYNGIDTDRFR 177 (177)
T ss_dssp H--------CTTHHHHCCSSEEEESSHHHHHHHHH--------------------HT----SS-EEE----B-CCCH-
T ss_pred h--------hhhhhHHhcCCEEEEECHHHHHHHHH--------------------hCCc--ccCCEEEECCccHHHcC
Confidence 0 11233578999999999976663211 2443 68999999999999873
No 105
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=99.24 E-value=1.6e-11 Score=117.91 Aligned_cols=160 Identities=17% Similarity=0.238 Sum_probs=84.4
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCcccccceeecCCCCeEEEEeccCCCCcccccccc
Q 003726 291 GGQVVYILDQVRALENEMLLRIQNQGLDVIPKILIVTRLIPDAKGTTCNQRLERISGTEHTHILRVPFRTENGILRKWIS 370 (800)
Q Consensus 291 GG~~vyild~araL~~eLa~~L~~~GheV~~~i~VvTr~~p~~~g~~~~~~~e~~~g~~~v~I~rvp~~~~~~~~~~~is 370 (800)
||.+.++. +|+++|.++||+|+ |+|...+.. ..+ ....++.+.++|.......
T Consensus 1 GG~~~~~~--------~l~~~L~~~G~~V~----v~~~~~~~~-------~~~--~~~~~~~~~~~~~~~~~~~------ 53 (160)
T PF13579_consen 1 GGIERYVR--------ELARALAARGHEVT----VVTPQPDPE-------DDE--EEEDGVRVHRLPLPRRPWP------ 53 (160)
T ss_dssp SHHHHHHH--------HHHHHHHHTT-EEE----EEEE---GG-------G-S--EEETTEEEEEE--S-SSSG------
T ss_pred CCHHHHHH--------HHHHHHHHCCCEEE----EEecCCCCc-------ccc--cccCCceEEeccCCccchh------
Confidence 89999999 66777799999999 998664332 111 1123688889887654210
Q ss_pred ccCChhhHHHHHHHHHHHHHHHhCCCceEEEECCCCchHHHHHHHhcCCCeEEEEecCCccccCCCChhhHHhhhhhhcc
Q 003726 371 RFDVWPYLETFAEDASNEIAAELQGVPDLIIGNYSDGNLVATLLSYKLGVTQCNIAHALEKTKYPDSDLYWRKFEEKYHF 450 (800)
Q Consensus 371 r~~i~~yl~~f~~~~~~~ll~~~~~~PDIIh~h~~~~~lva~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~f 450 (800)
...+..+ .. ...++.....+||+||+|++..++++.++++..++|+|+++|+...... ..|.. ..
T Consensus 54 -~~~~~~~----~~-~~~~l~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~----~~~~~--~~--- 118 (160)
T PF13579_consen 54 -LRLLRFL----RR-LRRLLAARRERPDVVHAHSPTAGLVAALARRRRGIPLVVTVHGTLFRRG----SRWKR--RL--- 118 (160)
T ss_dssp -GGHCCHH----HH-HHHHCHHCT---SEEEEEHHHHHHHHHHHHHHHT--EEEE-SS-T----------HHH--HH---
T ss_pred -hhhHHHH----HH-HHHHHhhhccCCeEEEecccchhHHHHHHHHccCCcEEEEECCCchhhc----cchhh--HH---
Confidence 0111111 11 2222222366999999999776777777776789999999998532111 11111 00
Q ss_pred chhhhHHHHHhccCCEEEecCHHHHhhcccCccccccccccccccceeeeccCCCCCCceEEecCC
Q 003726 451 SSQFTADLTAMNNADFIITSTYQEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFDPKFNIVSPG 516 (800)
Q Consensus 451 ~~~~~~e~~a~~~AD~IIt~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~~k~~VIpnG 516 (800)
....++..++.||.|+++|+...+... . .|++ .+|+.|||||
T Consensus 119 --~~~~~~~~~~~ad~vi~~S~~~~~~l~-------------------~-~g~~--~~ri~vipnG 160 (160)
T PF13579_consen 119 --YRWLERRLLRRADRVIVVSEAMRRYLR-------------------R-YGVP--PDRIHVIPNG 160 (160)
T ss_dssp --HHHHHHHHHHH-SEEEESSHHHHHHHH-------------------H-H-----GGGEEE----
T ss_pred --HHHHHHHHHhcCCEEEECCHHHHHHHH-------------------H-hCCC--CCcEEEeCcC
Confidence 112367799999999999997766321 1 2443 7899999998
No 106
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=99.19 E-value=3.9e-09 Score=128.96 Aligned_cols=307 Identities=14% Similarity=0.144 Sum_probs=203.4
Q ss_pred eEEEECCCCchHHHHHHHhcC-CCeEEEEecCCccccCCCChhhHHhhhhhhccchhhhHHHHHhccCCEEEecCHHHHh
Q 003726 398 DLIIGNYSDGNLVATLLSYKL-GVTQCNIAHALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNNADFIITSTYQEIA 476 (800)
Q Consensus 398 DIIh~h~~~~~lva~lla~~~-gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ei~ 476 (800)
|+|..|+.+..+++.++.++. ..++.+..|..+ |.++++.. + -+...-...|-.||.|=..|+..+.
T Consensus 203 d~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPF----Ps~eifr~-L-------P~r~eiL~glL~aDlIGFht~~yar 270 (854)
T PLN02205 203 DFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPF----PSSEIYKT-L-------PIREELLRALLNSDLIGFHTFDYAR 270 (854)
T ss_pred CEEEEeCchhhHHHHHHHhhCCCCcEEEEecCCC----CChHHHhh-C-------CcHHHHHHHHhcCCeEEecCHHHHH
Confidence 899999999989988887764 478888999863 33332211 1 1112234578899999999986655
Q ss_pred hcccCcccccccccccccccee----eeccCCCCC--CceEEecCCCCCCCCCCC---ChHHHHHHHhhccccccccCCc
Q 003726 477 GSKNNVGQYENHTAFTLPGLYR----VVHGIDVFD--PKFNIVSPGADMCIYFPY---SDKEKRLIALHGQIEDLLYDPK 547 (800)
Q Consensus 477 ~~~~~~gqy~~~~~f~~p~l~~----vv~Gi~v~~--~k~~VIpnGvD~~~f~p~---~~~~~rl~~~~~~~~~~l~~~~ 547 (800)
..-..+... -|+-. ...|+.... -++.+.|-|+|...|... ++...+...
T Consensus 271 ~Fl~~~~r~--------lgl~~~~~~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~~~~~~~~~~------------- 329 (854)
T PLN02205 271 HFLSCCSRM--------LGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETEAKVKE------------- 329 (854)
T ss_pred HHHHHHHHH--------hCCcccCCCcceeEEECCcEEEEEEEeCeEcHHHHHHHhcChhHHHHHHH-------------
Confidence 332221110 01100 001121111 257778999999877432 111112111
Q ss_pred cccccccccCCCCCcEEEEEecCCCCCCHHHHHHHHHHhhccCCC----eEEEEEeccCCCCCccchHHHHHHHHHHHHH
Q 003726 548 QNDEHVGILNDRSKPLIFSMARLDGVKNLTGLVECYGKSSKLREL----VNLVVVGGYMDVKNSRDREEMAEIEKMHGLI 623 (800)
Q Consensus 548 ~~~~~~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~l~~~~~~----v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li 623 (800)
.+++++ .+++.+|+.+.|++..||+..=+.||.++.+.+|+ +.|+-+..... +...+..+...++.+++
T Consensus 330 -l~~~~~---~~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~psr---~~~~~y~~~~~ev~~~v 402 (854)
T PLN02205 330 -LIKQFC---DQDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPAR---GKGKDVKEVQAETHSTV 402 (854)
T ss_pred -HHHHhc---cCCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCC---cccHHHHHHHHHHHHHH
Confidence 112222 23578999999999999999999999999877665 56777766543 22233334444555555
Q ss_pred HH----cCCCC--cEEEcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCC------------------
Q 003726 624 KQ----YNLHG--QFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGL------------------ 679 (800)
Q Consensus 624 ~~----~gL~~--~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~Gl------------------ 679 (800)
.+ +|-.+ -|.++- ..++..++..+|+. ||+++..+..+|+-++..|+.+|-.
T Consensus 403 ~rIN~~fg~~~~~Pv~~~~---~~~~~~e~~aly~~-ADv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~~~~~ 478 (854)
T PLN02205 403 KRINETFGKPGYDPIVLID---APLKFYERVAYYVV-AECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKK 478 (854)
T ss_pred HHHHhhcCCCCCceEEEEe---cCCCHHHHHHHHHh-ccEEEeccccccccccchheeEEccCccccccccccccccCCC
Confidence 44 33221 255554 36788999999996 9999999999999999999999854
Q ss_pred -cEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 003726 680 -PTFATCHGGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLTL 755 (800)
Q Consensus 680 -PVIAT~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~l 755 (800)
..|.|...|.+..+. ..++|+|.|.+++|++|.+++. .+++.++..-++.++++ .++|-...++.++.-
T Consensus 479 gvLiLSEfaGaa~~L~---~Ai~VNP~d~~~~a~ai~~AL~---m~~~Er~~R~~~~~~~v-~~~d~~~W~~~fl~~ 548 (854)
T PLN02205 479 SMLVVSEFIGCSPSLS---GAIRVNPWNIDAVADAMDSALE---MAEPEKQLRHEKHYRYV-STHDVGYWARSFLQD 548 (854)
T ss_pred CceEeeeccchhHHhC---cCeEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-hhCCHHHHHHHHHHH
Confidence 366777777766662 3799999999999999998884 56666666556666666 788988888887753
No 107
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]
Probab=99.15 E-value=9.8e-09 Score=116.65 Aligned_cols=326 Identities=15% Similarity=0.118 Sum_probs=208.9
Q ss_pred HHHHHHHHHHhCCCceEEEECCCCchHHHHHHHhcCC-CeEEEEecCCccccCCCChhhHHhhhhhhccchhhhHHHHHh
Q 003726 383 EDASNEIAAELQGVPDLIIGNYSDGNLVATLLSYKLG-VTQCNIAHALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAM 461 (800)
Q Consensus 383 ~~~~~~ll~~~~~~PDIIh~h~~~~~lva~lla~~~g-ip~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~ 461 (800)
...+.++.+..+ .=|+|..|+....+++..+..+.. .++.+..|..++ .+++.- ..-+...-.-.+
T Consensus 135 ~~FAd~i~~~~~-~gDiIWVhDYhL~L~P~mlR~~~~~~~IgfFlHiPfP----ssEvfr--------~lP~r~eIl~gl 201 (486)
T COG0380 135 RKFADKIVEIYE-PGDIIWVHDYHLLLVPQMLRERIPDAKIGFFLHIPFP----SSEVFR--------CLPWREEILEGL 201 (486)
T ss_pred HHHHHHHHHhcC-CCCEEEEEechhhhhHHHHHHhCCCceEEEEEeCCCC----CHHHHh--------hCchHHHHHHHh
Confidence 334444554442 239999999999899988887764 678888887643 232211 011112223478
Q ss_pred ccCCEEEecCHHHHhhcccCccccccccccccccceeee-ccCCCCCCceEEecCCCCCCCCCCCChHH---HHHHHhhc
Q 003726 462 NNADFIITSTYQEIAGSKNNVGQYENHTAFTLPGLYRVV-HGIDVFDPKFNIVSPGADMCIYFPYSDKE---KRLIALHG 537 (800)
Q Consensus 462 ~~AD~IIt~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv-~Gi~v~~~k~~VIpnGvD~~~f~p~~~~~---~rl~~~~~ 537 (800)
-.||.|-..++..+...-+.+.+--. ++ +...+. .|.+-...++...|=|+|...|....... .++..
T Consensus 202 l~~dligFqt~~y~~nF~~~~~r~~~---~~--~~~~~~~~~~~~~~v~v~a~PIgID~~~~~~~~~~~~v~~~~~e--- 273 (486)
T COG0380 202 LGADLIGFQTESYARNFLDLCSRLLG---VT--GDADIRFNGADGRIVKVGAFPIGIDPEEFERALKSPSVQEKVLE--- 273 (486)
T ss_pred hcCCeeEecCHHHHHHHHHHHHHhcc---cc--ccccccccccCCceEEEEEEeeecCHHHHHHhhcCCchhhHHHH---
Confidence 89999999888655433222211100 00 000011 11100013566689999988775332111 11111
Q ss_pred cccccccCCccccccccccCCCCCcEEEEEecCCCCCCHHHHHHHHHHhhccCC----CeEEEEEeccCCCCCccchHHH
Q 003726 538 QIEDLLYDPKQNDEHVGILNDRSKPLIFSMARLDGVKNLTGLVECYGKSSKLRE----LVNLVVVGGYMDVKNSRDREEM 613 (800)
Q Consensus 538 ~~~~~l~~~~~~~~~~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~l~~~~~----~v~LvIVG~g~~~~~~~~~e~~ 613 (800)
.++.+ ..++.+|+.+-|+|..||+..=+.||.++.+.+| ++.|+-++..... .-++.+
T Consensus 274 -----------l~~~~----~~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~kvvliQi~~pSr~---~v~~y~ 335 (486)
T COG0380 274 -----------LKAEL----GRNKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKVVLLQIAPPSRE---DVEEYQ 335 (486)
T ss_pred -----------HHHHh----cCCceEEEEehhcccccCcHHHHHHHHHHHHhChhhhCceEEEEecCCCcc---ccHHHH
Confidence 11112 2348899999999999999999999999986655 4778888776552 122223
Q ss_pred HHHHHHHHHHHHc-CCCCcEEEcc--cccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHc----CCcEEEcCc
Q 003726 614 AEIEKMHGLIKQY-NLHGQFRWIS--AQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTC----GLPTFATCH 686 (800)
Q Consensus 614 ~~~~~l~~li~~~-gL~~~V~flG--~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~----GlPVIAT~~ 686 (800)
....++.+++.+- +..|++.|.. +-...++..+++.++.. +|+++..++-+|+.++..|+.+| +=|.|-|..
T Consensus 336 ~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~-aDv~lVtplrDGMNLvakEyVa~q~~~~G~LiLSeF 414 (486)
T COG0380 336 ALRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRA-ADVMLVTPLRDGMNLVAKEYVAAQRDKPGVLILSEF 414 (486)
T ss_pred HHHHHHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhh-hceeeeccccccccHHHHHHHHhhcCCCCcEEEecc
Confidence 3445555555542 2334444433 11235788999999996 99999999999999999999998 447778887
Q ss_pred cccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 003726 687 GGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLTL 755 (800)
Q Consensus 687 GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~l 755 (800)
.|.+..+.+ .++++|.|.+++|++|..++. .+++.+++.-+..++.+ .++|-...+..++.-
T Consensus 415 aGaa~~L~~---AliVNP~d~~~va~ai~~AL~---m~~eEr~~r~~~~~~~v-~~~d~~~W~~~fl~~ 476 (486)
T COG0380 415 AGAASELRD---ALIVNPWDTKEVADAIKRALT---MSLEERKERHEKLLKQV-LTHDVARWANSFLDD 476 (486)
T ss_pred ccchhhhcc---CEeECCCChHHHHHHHHHHhc---CCHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHH
Confidence 777777743 799999999999999998885 67776666666666666 678888888886653
No 108
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=99.15 E-value=7e-09 Score=118.26 Aligned_cols=144 Identities=9% Similarity=0.129 Sum_probs=112.8
Q ss_pred CcEEEEEecCCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEcccccC
Q 003726 561 KPLIFSMARLDGVKNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISAQMN 640 (800)
Q Consensus 561 k~iIl~vGRL~~~Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~~~~ 640 (800)
+.-+++++. +..+++++++.+..|+++|.| |.+.. ...+|.++ +++ ++.+.+.|...
T Consensus 282 ~~~~l~~t~-------s~~I~~i~~Lv~~lPd~~f~I-ga~te-----------~s~kL~~L-~~y--~nvvly~~~~~- 338 (438)
T TIGR02919 282 RKQALILTN-------SDQIEHLEEIVQALPDYHFHI-AALTE-----------MSSKLMSL-DKY--DNVKLYPNITT- 338 (438)
T ss_pred cccEEEECC-------HHHHHHHHHHHHhCCCcEEEE-EecCc-----------ccHHHHHH-Hhc--CCcEEECCcCh-
Confidence 344666662 999999999999899999999 66544 12678788 777 46677776433
Q ss_pred ccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcCc-cccccccccCceEEEECCCCHHHHHHHHHHHHH
Q 003726 641 RVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATCH-GGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFE 719 (800)
Q Consensus 641 ~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~~-GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~ 719 (800)
..+-..+.. ||+++-.|..|+|++++.||++.|+|+|+.+. -|+.+++.+ |.+++.+|+++|+++|.+++
T Consensus 339 ----~~l~~ly~~-~dlyLdin~~e~~~~al~eA~~~G~pI~afd~t~~~~~~i~~---g~l~~~~~~~~m~~~i~~lL- 409 (438)
T TIGR02919 339 ----QKIQELYQT-CDIYLDINHGNEILNAVRRAFEYNLLILGFEETAHNRDFIAS---ENIFEHNEVDQLISKLKDLL- 409 (438)
T ss_pred ----HHHHHHHHh-ccEEEEccccccHHHHHHHHHHcCCcEEEEecccCCcccccC---CceecCCCHHHHHHHHHHHh-
Confidence 356666665 99999999999999999999999999999954 467788866 88999999999999998877
Q ss_pred HhcCCHHHHHHHHHHHHHHH
Q 003726 720 KCYNDPSHWNKISDGGLKRI 739 (800)
Q Consensus 720 ~l~~dp~~~~~ms~~a~~~v 739 (800)
.||+.+++.-..-++.+
T Consensus 410 ---~d~~~~~~~~~~q~~~a 426 (438)
T TIGR02919 410 ---NDPNQFRELLEQQREHA 426 (438)
T ss_pred ---cCHHHHHHHHHHHHHHh
Confidence 89987776544444443
No 109
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=99.07 E-value=5.7e-08 Score=109.55 Aligned_cols=124 Identities=15% Similarity=0.084 Sum_probs=81.3
Q ss_pred CCCCcEEEEEecCCC---CCCHHHHHHHHHHhhccCCCeEEEE-EeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEE
Q 003726 558 DRSKPLIFSMARLDG---VKNLTGLVECYGKSSKLRELVNLVV-VGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFR 633 (800)
Q Consensus 558 ~~~k~iIl~vGRL~~---~Kgl~~LleA~~~l~~~~~~v~LvI-VG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~ 633 (800)
+.+++++++.|+... .+-...+++++..+ +.++++ +|.... .. ..++++|.
T Consensus 237 ~~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~-----~~~~i~~~g~~~~-------------~~-------~~~~~~v~ 291 (401)
T cd03784 237 AGRPPVYVGFGSMVVRDPEALARLDVEAVATL-----GQRAILSLGWGGL-------------GA-------EDLPDNVR 291 (401)
T ss_pred CCCCcEEEeCCCCcccCHHHHHHHHHHHHHHc-----CCeEEEEccCccc-------------cc-------cCCCCceE
Confidence 345567788888754 23344555565543 345444 444433 00 24568999
Q ss_pred EcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccccCceEEEECCC--CH
Q 003726 634 WISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG----PAEIIEHGVSGFHIDPY--HP 707 (800)
Q Consensus 634 flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~~GG----~~EiI~dg~~G~lv~p~--d~ 707 (800)
+.+ .++..+++. .+|++|.- +-..|+.||+++|+|+|....++ .++.+++.+.|..+++. +.
T Consensus 292 ~~~----~~p~~~ll~----~~d~~I~h----gG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~G~g~~l~~~~~~~ 359 (401)
T cd03784 292 VVD----FVPHDWLLP----RCAAVVHH----GGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPALDPRELTA 359 (401)
T ss_pred EeC----CCCHHHHhh----hhheeeec----CCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHCCCCCCCCcccCCH
Confidence 998 455555544 48999953 33588999999999999996554 35556666788887765 67
Q ss_pred HHHHHHHHHHH
Q 003726 708 DQVAELMIEFF 718 (800)
Q Consensus 708 e~lA~aI~~~l 718 (800)
+++++++.+++
T Consensus 360 ~~l~~al~~~l 370 (401)
T cd03784 360 ERLAAALRRLL 370 (401)
T ss_pred HHHHHHHHHHh
Confidence 88888886665
No 110
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=99.06 E-value=6.1e-10 Score=117.89 Aligned_cols=183 Identities=18% Similarity=0.152 Sum_probs=103.7
Q ss_pred EEEEEccCcCCCCccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCcc-cccceeec-
Q 003726 269 NVVIVSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIQNQGLDVIPKILIVTRLIPDAKGTTC-NQRLERIS- 346 (800)
Q Consensus 269 rI~ivs~hg~~~~~~~lg~p~tGG~~vyild~araL~~eLa~~L~~~GheV~~~i~VvTr~~p~~~g~~~-~~~~e~~~- 346 (800)
||++||....|- -.+||...++. .|+++|+++||+|. |+++.+........ ........
T Consensus 1 kIl~vt~E~~P~-------~k~GGLgdv~~--------~L~kaL~~~G~~V~----Vi~P~y~~~~~~~~~~~~~~~~~~ 61 (245)
T PF08323_consen 1 KILMVTSEYAPF-------AKVGGLGDVVG--------SLPKALAKQGHDVR----VIMPKYGFIDEEYFQLEPVRRLSV 61 (245)
T ss_dssp EEEEE-S-BTTT-------B-SSHHHHHHH--------HHHHHHHHTT-EEE----EEEE-THHHHHHCTTEEEEEEES-
T ss_pred CEEEEEcccCcc-------cccCcHhHHHH--------HHHHHHHhcCCeEE----EEEccchhhhhhhhcceEEEEecc
Confidence 799999988753 36899999999 55555699999999 99988643211100 00000000
Q ss_pred -------------------CCCCeEEEEeccCCCCccccccccccCChh--------hHHHHH--HHHHHHHHHHhCCCc
Q 003726 347 -------------------GTEHTHILRVPFRTENGILRKWISRFDVWP--------YLETFA--EDASNEIAAELQGVP 397 (800)
Q Consensus 347 -------------------g~~~v~I~rvp~~~~~~~~~~~isr~~i~~--------yl~~f~--~~~~~~ll~~~~~~P 397 (800)
..+++.++-+... .+.+|..++. ..++|+ ..+..++++.++.+|
T Consensus 62 ~~~~~v~~~~~~~~~v~~~~~~~v~v~~i~~~-------~~f~r~~iY~~~~~~~~d~~~rf~~fs~a~le~~~~l~~~p 134 (245)
T PF08323_consen 62 PFGGPVPVGVWYEVRVYRYPVDGVPVYFIDNP-------EYFDRPGIYGDNGGDYPDNAERFAFFSRAALELLKKLGWKP 134 (245)
T ss_dssp STTCEEEEE----EEEEEEEETTEEEEEEESH-------HHHGSSSSSBSTSSBHTTHHHHHHHHHHHHHHHHCTCT-S-
T ss_pred ccccccccccceEEEEEEEEcCCccEEEecCh-------hhccccceeccCCCcchhHHHHHHHHHHHHHHHHHhhCCCC
Confidence 0023444333211 1234444541 133333 455556666556799
Q ss_pred eEEEECCCCchHHHHHHHhcC-------CCeEEEEecCCccccC-CCCh-----hhHHh--hhhhhccchhhhHHHHHhc
Q 003726 398 DLIIGNYSDGNLVATLLSYKL-------GVTQCNIAHALEKTKY-PDSD-----LYWRK--FEEKYHFSSQFTADLTAMN 462 (800)
Q Consensus 398 DIIh~h~~~~~lva~lla~~~-------gip~v~t~H~l~~~~~-~~s~-----~~~~~--~~~~y~f~~~~~~e~~a~~ 462 (800)
||||||+|.+++++.+++... ++|+|+|+|+++.... +... +.+.. ....+.+...+...+.++.
T Consensus 135 DIIH~hDW~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~~~~~~~~~~~~~~in~lk~gi~ 214 (245)
T PF08323_consen 135 DIIHCHDWHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDEYFQNLDEYEFYGQINFLKAGIV 214 (245)
T ss_dssp SEEEEECGGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEGGGGGCTT-GGGGS-STTTTEETTEEEHHHHHHH
T ss_pred CEEEecCchHHHHHHHhccccccccccccceeEEEEcccccCCcCCHHHHHHcCCCHHHhccccccccccccCHHHHHHH
Confidence 999999999999999999876 5999999999754431 1111 11111 1111222233445568999
Q ss_pred cCCEEEecCHHHHhh
Q 003726 463 NADFIITSTYQEIAG 477 (800)
Q Consensus 463 ~AD~IIt~S~~ei~~ 477 (800)
.||.|+|+|+..++.
T Consensus 215 ~AD~v~TVS~~Ya~E 229 (245)
T PF08323_consen 215 YADKVTTVSPTYARE 229 (245)
T ss_dssp HSSEEEESSHHHHHH
T ss_pred hcCEeeeCCHHHHHH
Confidence 999999999976653
No 111
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=98.97 E-value=4.2e-07 Score=102.46 Aligned_cols=112 Identities=18% Similarity=0.211 Sum_probs=74.8
Q ss_pred CCCcEEEcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccccCceEEEEC
Q 003726 628 LHGQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG----PAEIIEHGVSGFHID 703 (800)
Q Consensus 628 L~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~~GG----~~EiI~dg~~G~lv~ 703 (800)
+.++|.+.+ .++..++ +. .+|++|..+ | ..|+.||+++|+|+|+....+ ..+.+++.+.|..++
T Consensus 273 ~~~~v~~~~----~~p~~~l---l~-~~~~~I~hg---G-~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~g~g~~l~ 340 (392)
T TIGR01426 273 LPPNVEVRQ----WVPQLEI---LK-KADAFITHG---G-MNSTMEALFNGVPMVAVPQGADQPMTARRIAELGLGRHLP 340 (392)
T ss_pred CCCCeEEeC----CCCHHHH---Hh-hCCEEEECC---C-chHHHHHHHhCCCEEecCCcccHHHHHHHHHHCCCEEEec
Confidence 457898887 4444444 45 499999753 2 247999999999999974433 334455666788776
Q ss_pred CC--CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 003726 704 PY--HPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLTLA 756 (800)
Q Consensus 704 p~--d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly 756 (800)
.. ++++++++|.+++ .|++.++++.+- .+.+...-.-+..++.++++.
T Consensus 341 ~~~~~~~~l~~ai~~~l----~~~~~~~~~~~l-~~~~~~~~~~~~aa~~i~~~~ 390 (392)
T TIGR01426 341 PEEVTAEKLREAVLAVL----SDPRYAERLRKM-RAEIREAGGARRAADEIEGFL 390 (392)
T ss_pred cccCCHHHHHHHHHHHh----cCHHHHHHHHHH-HHHHHHcCCHHHHHHHHHHhh
Confidence 43 5788888887766 888866665443 334445556666666666543
No 112
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases.
Probab=98.90 E-value=3.9e-08 Score=99.11 Aligned_cols=176 Identities=19% Similarity=0.187 Sum_probs=116.5
Q ss_pred eEEEEEccCcCCCCccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCcccccceeecC
Q 003726 268 FNVVIVSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIQNQGLDVIPKILIVTRLIPDAKGTTCNQRLERISG 347 (800)
Q Consensus 268 ~rI~ivs~hg~~~~~~~lg~p~tGG~~vyild~araL~~eLa~~L~~~GheV~~~i~VvTr~~p~~~g~~~~~~~e~~~g 347 (800)
.||+||...|.|.. -||.|.++. +|+.+|+++||+|+ |.|+...... . ...
T Consensus 2 kkIaIiGtrGIPa~--------YGGfET~ve--------~L~~~l~~~g~~v~----Vyc~~~~~~~------~---~~~ 52 (185)
T PF09314_consen 2 KKIAIIGTRGIPAR--------YGGFETFVE--------ELAPRLVSKGIDVT----VYCRSDYYPY------K---EFE 52 (185)
T ss_pred ceEEEEeCCCCCcc--------cCcHHHHHH--------HHHHHHhcCCceEE----EEEccCCCCC------C---Ccc
Confidence 58999999999975 499999999 88889999999999 9988632211 1 122
Q ss_pred CCCeEEEEeccCCCCccccccccccCChhhHHHHHHH--HHHHHH---HHhCCCceEEEECCCC-chHHHHHHHhc--CC
Q 003726 348 TEHTHILRVPFRTENGILRKWISRFDVWPYLETFAED--ASNEIA---AELQGVPDLIIGNYSD-GNLVATLLSYK--LG 419 (800)
Q Consensus 348 ~~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~--~~~~ll---~~~~~~PDIIh~h~~~-~~lva~lla~~--~g 419 (800)
..|++++.+|.... |- +.++..+ ++...+ +.-+.+.||||.+... ++.+..++.+. .|
T Consensus 53 y~gv~l~~i~~~~~-g~-------------~~si~yd~~sl~~al~~~~~~~~~~~ii~ilg~~~g~~~~~~~r~~~~~g 118 (185)
T PF09314_consen 53 YNGVRLVYIPAPKN-GS-------------AESIIYDFLSLLHALRFIKQDKIKYDIILILGYGIGPFFLPFLRKLRKKG 118 (185)
T ss_pred cCCeEEEEeCCCCC-Cc-------------hHHHHHHHHHHHHHHHHHhhccccCCEEEEEcCCccHHHHHHHHhhhhcC
Confidence 34799999986532 10 1122211 111222 1112367899977766 55555555543 47
Q ss_pred CeEEEEecCCccccCCCChhhHHhhhhhhccchhhhHHHHHhccCCEEEecCHHHHhhcccCccccccccccccccceee
Q 003726 420 VTQCNIAHALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNNADFIITSTYQEIAGSKNNVGQYENHTAFTLPGLYRV 499 (800)
Q Consensus 420 ip~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ei~~~~~~~gqy~~~~~f~~p~l~~v 499 (800)
.|+++..|++|. ...+|..+.++|.. ..|+++.+.||.+|+-|....+..++..
T Consensus 119 ~~v~vN~DGlEW-----kR~KW~~~~k~~lk----~~E~~avk~ad~lIaDs~~I~~y~~~~y----------------- 172 (185)
T PF09314_consen 119 GKVVVNMDGLEW-----KRAKWGRPAKKYLK----FSEKLAVKYADRLIADSKGIQDYIKERY----------------- 172 (185)
T ss_pred CcEEECCCcchh-----hhhhcCHHHHHHHH----HHHHHHHHhCCEEEEcCHHHHHHHHHHc-----------------
Confidence 799999999864 33466666655532 5688899999999999985544222221
Q ss_pred eccCCCCCCceEEecCCCC
Q 003726 500 VHGIDVFDPKFNIVSPGAD 518 (800)
Q Consensus 500 v~Gi~v~~~k~~VIpnGvD 518 (800)
+ .++..+|++|+|
T Consensus 173 --~----~~~s~~IaYGad 185 (185)
T PF09314_consen 173 --G----RKKSTFIAYGAD 185 (185)
T ss_pred --C----CCCcEEecCCCC
Confidence 1 367899999987
No 113
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=98.78 E-value=2.7e-06 Score=96.44 Aligned_cols=166 Identities=14% Similarity=0.198 Sum_probs=105.9
Q ss_pred CCcEE-EEEecCC--CCCCHHHHHHHHHHhhccCCCeEEEEEe-ccCCCCCccchHHHHHHHHHHHHHHHcCCC------
Q 003726 560 SKPLI-FSMARLD--GVKNLTGLVECYGKSSKLRELVNLVVVG-GYMDVKNSRDREEMAEIEKMHGLIKQYNLH------ 629 (800)
Q Consensus 560 ~k~iI-l~vGRL~--~~Kgl~~LleA~~~l~~~~~~v~LvIVG-~g~~~~~~~~~e~~~~~~~l~~li~~~gL~------ 629 (800)
+.+++ +.-|.-. ..+++..+++++.++.+. +++.+++.- ++.+ .+.+.+..++.+..
T Consensus 204 ~~~~lllLpGSR~ae~~~~lp~~l~al~~L~~~-~~~~~v~~~~~~~~------------~~~~~~~l~~~g~~~~~~~~ 270 (396)
T TIGR03492 204 GRFRIALLPGSRPPEAYRNLKLLLRALEALPDS-QPFVFLAAIVPSLS------------LEKLQAILEDLGWQLEGSSE 270 (396)
T ss_pred CCCEEEEECCCCHHHHHccHHHHHHHHHHHhhC-CCeEEEEEeCCCCC------------HHHHHHHHHhcCceecCCcc
Confidence 33444 4444432 256888999999999655 678887765 4433 34455555544442
Q ss_pred --------CcEEEcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcCcccc---ccccccC--
Q 003726 630 --------GQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGP---AEIIEHG-- 696 (800)
Q Consensus 630 --------~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~~GG~---~EiI~dg-- 696 (800)
+++.+.. ...+++.+++. ||++|.. .|.+..|++++|+|+|.....+. ..+.+..
T Consensus 271 ~~~~~~~~~~~~v~~------~~~~~~~~l~~-ADlvI~r-----SGt~T~E~a~lg~P~Ilip~~~~q~na~~~~~~~~ 338 (396)
T TIGR03492 271 DQTSLFQKGTLEVLL------GRGAFAEILHW-ADLGIAM-----AGTATEQAVGLGKPVIQLPGKGPQFTYGFAEAQSR 338 (396)
T ss_pred ccchhhccCceEEEe------chHhHHHHHHh-CCEEEEC-----cCHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhhHh
Confidence 1244443 13468888886 9999987 45666999999999999874443 1222221
Q ss_pred --ceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 003726 697 --VSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLT 754 (800)
Q Consensus 697 --~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ 754 (800)
..+..+...+++.+++++.+++ +|++.+++|.++++++..+...-+.+++.+.+
T Consensus 339 l~g~~~~l~~~~~~~l~~~l~~ll----~d~~~~~~~~~~~~~~lg~~~a~~~ia~~i~~ 394 (396)
T TIGR03492 339 LLGGSVFLASKNPEQAAQVVRQLL----ADPELLERCRRNGQERMGPPGASARIAESILK 394 (396)
T ss_pred hcCCEEecCCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 2445555667888888887665 89999888886565555444555555554443
No 114
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=98.77 E-value=8.3e-07 Score=96.81 Aligned_cols=116 Identities=16% Similarity=0.220 Sum_probs=80.7
Q ss_pred CCCcEEEEEecCCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEcccc
Q 003726 559 RSKPLIFSMARLDGVKNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISAQ 638 (800)
Q Consensus 559 ~~k~iIl~vGRL~~~Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~~ 638 (800)
+.+.+++++|..+.. .++++++++ ++..++++|.... + .-.++|++.++.
T Consensus 191 ~~~~iLv~~gg~~~~----~~~~~l~~~----~~~~~~v~g~~~~--------------------~--~~~~ni~~~~~~ 240 (318)
T PF13528_consen 191 DEPKILVYFGGGGPG----DLIEALKAL----PDYQFIVFGPNAA--------------------D--PRPGNIHVRPFS 240 (318)
T ss_pred CCCEEEEEeCCCcHH----HHHHHHHhC----CCCeEEEEcCCcc--------------------c--ccCCCEEEeecC
Confidence 455688899987665 666776664 4788999976632 0 004789988632
Q ss_pred cCccChHHHHHHHHccCcEEEecCCCCCCcHH-HHHHHHcCCcEEEcCcccccc------ccccCceEEEECC--CCHHH
Q 003726 639 MNRVRNGELYRYIADTRGVFVQPAFYEAFGLT-VVEAMTCGLPTFATCHGGPAE------IIEHGVSGFHIDP--YHPDQ 709 (800)
Q Consensus 639 ~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~-vlEAMA~GlPVIAT~~GG~~E------iI~dg~~G~lv~p--~d~e~ 709 (800)
..++.++|+. ||++|.- -|.+ +.||+++|+|++.-...+..| .+++-+.|..+++ -+++.
T Consensus 241 -----~~~~~~~m~~-ad~vIs~-----~G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~~~~~~~~~~ 309 (318)
T PF13528_consen 241 -----TPDFAELMAA-ADLVISK-----GGYTTISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVLSQEDLTPER 309 (318)
T ss_pred -----hHHHHHHHHh-CCEEEEC-----CCHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEcccccCCHHH
Confidence 3578899996 9999985 4544 999999999999987655333 3445567777653 35677
Q ss_pred HHHHHH
Q 003726 710 VAELMI 715 (800)
Q Consensus 710 lA~aI~ 715 (800)
+++.|.
T Consensus 310 l~~~l~ 315 (318)
T PF13528_consen 310 LAEFLE 315 (318)
T ss_pred HHHHHh
Confidence 777763
No 115
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=98.68 E-value=2e-06 Score=96.51 Aligned_cols=267 Identities=17% Similarity=0.179 Sum_probs=147.3
Q ss_pred CCceEEEECC-CCchHHHHHHHhcCCCeEEEEecCCccccCCCChhhHHhhhhhhccchhhhHHHHHhccCCEEEecCHH
Q 003726 395 GVPDLIIGNY-SDGNLVATLLSYKLGVTQCNIAHALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNNADFIITSTYQ 473 (800)
Q Consensus 395 ~~PDIIh~h~-~~~~lva~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 473 (800)
.+||+|.++. ....+.++++|..+|+|++. +|+-..+.- . .+...+ ...-+-||...+++..
T Consensus 92 ~~Pd~vlv~GD~~~~la~alaA~~~~IPv~H-veaG~rs~~---~-----~eE~~r--------~~i~~la~l~f~~t~~ 154 (365)
T TIGR03568 92 LKPDLVVVLGDRFEMLAAAIAAALLNIPIAH-IHGGEVTEG---A-----IDESIR--------HAITKLSHLHFVATEE 154 (365)
T ss_pred hCCCEEEEeCCchHHHHHHHHHHHhCCcEEE-EECCccCCC---C-----chHHHH--------HHHHHHHhhccCCCHH
Confidence 3899999887 44578889999999999763 444322210 0 011110 1123455667777765
Q ss_pred HHhhcccCccccccccccccccceeeeccCCCCCCceEEe-cCCCCCCCCCCCChHHHHHHHhhccccccccCCcccccc
Q 003726 474 EIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFDPKFNIV-SPGADMCIYFPYSDKEKRLIALHGQIEDLLYDPKQNDEH 552 (800)
Q Consensus 474 ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~~k~~VI-pnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~ 552 (800)
..+.. ..-|++ +.++.++ .+++|.-......... ...+.
T Consensus 155 ~~~~L--------------------~~eg~~--~~~i~~tG~~~iD~l~~~~~~~~~------------------~~~~~ 194 (365)
T TIGR03568 155 YRQRV--------------------IQMGED--PDRVFNVGSPGLDNILSLDLLSKE------------------ELEEK 194 (365)
T ss_pred HHHHH--------------------HHcCCC--CCcEEEECCcHHHHHHhhhccCHH------------------HHHHH
Confidence 44411 011333 4566666 4455543322111111 11244
Q ss_pred ccccCCCC-CcEEEEEecCC--CCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCC
Q 003726 553 VGILNDRS-KPLIFSMARLD--GVKNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLH 629 (800)
Q Consensus 553 ~Gll~~~~-k~iIl~vGRL~--~~Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~ 629 (800)
+|+ +.+ +.+++.+-+-. .....+.+.+.+..+.+...++ +++....++ .+....+.+.++..+ .
T Consensus 195 lgl--~~~~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~~~~~--~vi~P~~~p------~~~~i~~~i~~~~~~---~ 261 (365)
T TIGR03568 195 LGI--DLDKPYALVTFHPVTLEKESAEEQIKELLKALDELNKNY--IFTYPNADA------GSRIINEAIEEYVNE---H 261 (365)
T ss_pred hCC--CCCCCEEEEEeCCCcccccCchHHHHHHHHHHHHhccCC--EEEEeCCCC------CchHHHHHHHHHhcC---C
Confidence 665 333 34445555433 3333344444444443332234 444322211 011112333333211 3
Q ss_pred CcEEEcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHH
Q 003726 630 GQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQ 709 (800)
Q Consensus 630 ~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~~GG~~EiI~dg~~G~lv~p~d~e~ 709 (800)
++|.+++ .++..++..+++. |+++|--| .|. +.||.++|+|||+ .|.-+|.++.|.+.+++ +.|+++
T Consensus 262 ~~v~l~~----~l~~~~~l~Ll~~-a~~vitdS----Sgg-i~EA~~lg~Pvv~--l~~R~e~~~~g~nvl~v-g~~~~~ 328 (365)
T TIGR03568 262 PNFRLFK----SLGQERYLSLLKN-ADAVIGNS----SSG-IIEAPSFGVPTIN--IGTRQKGRLRADSVIDV-DPDKEE 328 (365)
T ss_pred CCEEEEC----CCChHHHHHHHHh-CCEEEEcC----hhH-HHhhhhcCCCEEe--ecCCchhhhhcCeEEEe-CCCHHH
Confidence 6899998 7788999999997 98888532 233 4899999999995 45788888888888888 558899
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Q 003726 710 VAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLT 754 (800)
Q Consensus 710 lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ 754 (800)
+.+++.++ .+++.++.+ .....-|.....++++.+
T Consensus 329 I~~a~~~~-----~~~~~~~~~-----~~~~~pygdg~as~rI~~ 363 (365)
T TIGR03568 329 IVKAIEKL-----LDPAFKKSL-----KNVKNPYGDGNSSERIIE 363 (365)
T ss_pred HHHHHHHH-----hChHHHHHH-----hhCCCCCCCChHHHHHHH
Confidence 99988663 344433332 112234666666666654
No 116
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=98.58 E-value=8.7e-06 Score=89.53 Aligned_cols=75 Identities=13% Similarity=0.157 Sum_probs=54.5
Q ss_pred CCcEEEcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcCcccccc------ccccCceEEEE
Q 003726 629 HGQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAE------IIEHGVSGFHI 702 (800)
Q Consensus 629 ~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~~GG~~E------iI~dg~~G~lv 702 (800)
.+++.+.++. + +++..+++. ||++|.-+-+ .++.||+++|+|++.....+..| .+++.+.|..+
T Consensus 228 ~~~v~~~~~~----~-~~~~~~l~~-ad~vI~~~G~----~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l 297 (321)
T TIGR00661 228 NENVEIRRIT----T-DNFKELIKN-AELVITHGGF----SLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIAL 297 (321)
T ss_pred CCCEEEEECC----h-HHHHHHHHh-CCEEEECCCh----HHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEc
Confidence 4788888732 2 578888886 9999997522 46999999999999987765433 45666788888
Q ss_pred CCCCHHHHHHHH
Q 003726 703 DPYHPDQVAELM 714 (800)
Q Consensus 703 ~p~d~e~lA~aI 714 (800)
+..+. ++.+++
T Consensus 298 ~~~~~-~~~~~~ 308 (321)
T TIGR00661 298 EYKEL-RLLEAI 308 (321)
T ss_pred ChhhH-HHHHHH
Confidence 87766 333344
No 117
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=98.55 E-value=6.8e-05 Score=83.51 Aligned_cols=284 Identities=15% Similarity=0.119 Sum_probs=169.7
Q ss_pred HHHHHHHhCCCceEEEECCCCchHHHHHHHhcCCCeEEEEecCCccccCCCChhhHHhhhhhhccchhhhHHHHHhccCC
Q 003726 386 SNEIAAELQGVPDLIIGNYSDGNLVATLLSYKLGVTQCNIAHALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNNAD 465 (800)
Q Consensus 386 ~~~ll~~~~~~PDIIh~h~~~~~lva~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD 465 (800)
.+.+++. .+||+++.-.+.....-..-+++.|+|++..=--+ . ..|-..|+.+.. ..+..+.+.|
T Consensus 115 v~rFl~~--~~P~l~Ii~EtElWPnli~e~~~~~~p~~LvNaRL-S---~rS~~~y~k~~~---------~~~~~~~~i~ 179 (419)
T COG1519 115 VRRFLRK--WRPKLLIIMETELWPNLINELKRRGIPLVLVNARL-S---DRSFARYAKLKF---------LARLLFKNID 179 (419)
T ss_pred HHHHHHh--cCCCEEEEEeccccHHHHHHHHHcCCCEEEEeeee-c---hhhhHHHHHHHH---------HHHHHHHhcc
Confidence 3344443 38998886555543333345677899976531111 0 011112222211 1244788999
Q ss_pred EEEecCHHHHhhcccCccccccccccccccceeeeccCCCCCCceEEecCCCCCCCCCCCChHHHHHHHhhccccccccC
Q 003726 466 FIITSTYQEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLYD 545 (800)
Q Consensus 466 ~IIt~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~ 545 (800)
.|++-|+...+.. .+ . |+ +++.+..| +..+.- |.+.......
T Consensus 180 li~aQse~D~~Rf-------~~---L----------Ga----~~v~v~GN-lKfd~~-~~~~~~~~~~------------ 221 (419)
T COG1519 180 LILAQSEEDAQRF-------RS---L----------GA----KPVVVTGN-LKFDIE-PPPQLAAELA------------ 221 (419)
T ss_pred eeeecCHHHHHHH-------Hh---c----------CC----cceEEecc-eeecCC-CChhhHHHHH------------
Confidence 9999998776631 11 1 22 22444433 111111 1111111111
Q ss_pred CccccccccccCCCCCcEEEEEecCCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHH
Q 003726 546 PKQNDEHVGILNDRSKPLIFSMARLDGVKNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQ 625 (800)
Q Consensus 546 ~~~~~~~~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~ 625 (800)
..+.+++. .+++++..+. ...--+.+++++..+++.+|++.+++|=-.++ ..+.+.+++++
T Consensus 222 --~~r~~l~~----~r~v~iaaST--H~GEeei~l~~~~~l~~~~~~~llIlVPRHpE-----------Rf~~v~~l~~~ 282 (419)
T COG1519 222 --ALRRQLGG----HRPVWVAAST--HEGEEEIILDAHQALKKQFPNLLLILVPRHPE-----------RFKAVENLLKR 282 (419)
T ss_pred --HHHHhcCC----CCceEEEecC--CCchHHHHHHHHHHHHhhCCCceEEEecCChh-----------hHHHHHHHHHH
Confidence 11233332 2777777776 33334568899999999999999999988766 36778888999
Q ss_pred cCCCCc------------EEEcccccCccChHHHHHHHHccCcE-EEecCCCCCCcHHHHHHHHcCCcEEEc----Cccc
Q 003726 626 YNLHGQ------------FRWISAQMNRVRNGELYRYIADTRGV-FVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGG 688 (800)
Q Consensus 626 ~gL~~~------------V~flG~~~~~v~~~el~~~ia~aadv-fV~PS~~E~fGl~vlEAMA~GlPVIAT----~~GG 688 (800)
.|+.=. =.++| -..+||..+|.. +|+ ||--|+.+-=|--++|+.++|+|||.- +...
T Consensus 283 ~gl~~~~rS~~~~~~~~tdV~l~-----DtmGEL~l~y~~-adiAFVGGSlv~~GGHN~LEpa~~~~pvi~Gp~~~Nf~e 356 (419)
T COG1519 283 KGLSVTRRSQGDPPFSDTDVLLG-----DTMGELGLLYGI-ADIAFVGGSLVPIGGHNPLEPAAFGTPVIFGPYTFNFSD 356 (419)
T ss_pred cCCeEEeecCCCCCCCCCcEEEE-----ecHhHHHHHHhh-ccEEEECCcccCCCCCChhhHHHcCCCEEeCCccccHHH
Confidence 887210 12233 246899999986 775 555677665566799999999999986 3344
Q ss_pred cccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 003726 689 PAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLTLA 756 (800)
Q Consensus 689 ~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly 756 (800)
..+-+...+.|+.++ |.+.+++++ +.+..|++.+++|++++..-+.++ ....+++++..
T Consensus 357 i~~~l~~~ga~~~v~--~~~~l~~~v----~~l~~~~~~r~~~~~~~~~~v~~~---~gal~r~l~~l 415 (419)
T COG1519 357 IAERLLQAGAGLQVE--DADLLAKAV----ELLLADEDKREAYGRAGLEFLAQN---RGALARTLEAL 415 (419)
T ss_pred HHHHHHhcCCeEEEC--CHHHHHHHH----HHhcCCHHHHHHHHHHHHHHHHHh---hHHHHHHHHHh
Confidence 444455666788887 566666666 444588999999999999888533 22444444443
No 118
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=98.49 E-value=2.3e-06 Score=81.64 Aligned_cols=123 Identities=20% Similarity=0.202 Sum_probs=77.5
Q ss_pred HHHHHHHHCCCccccceeEEeCCCCCCCCCcccccceeecCCCCeEEEEeccCCCCccccccccccCChhhHHHHHHHHH
Q 003726 307 EMLLRIQNQGLDVIPKILIVTRLIPDAKGTTCNQRLERISGTEHTHILRVPFRTENGILRKWISRFDVWPYLETFAEDAS 386 (800)
Q Consensus 307 eLa~~L~~~GheV~~~i~VvTr~~p~~~g~~~~~~~e~~~g~~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~ 386 (800)
.+++.|+++|++|+ |+|..... +......++.+.+++... ....+++. +. . .
T Consensus 15 ~~~~~L~~~g~~V~----ii~~~~~~----------~~~~~~~~i~~~~~~~~~-----------k~~~~~~~-~~-~-l 66 (139)
T PF13477_consen 15 NLAKELKKRGYDVH----IITPRNDY----------EKYEIIEGIKVIRLPSPR-----------KSPLNYIK-YF-R-L 66 (139)
T ss_pred HHHHHHHHCCCEEE----EEEcCCCc----------hhhhHhCCeEEEEecCCC-----------CccHHHHH-HH-H-H
Confidence 56667799999999 88874211 111123468888886431 12444442 21 2 2
Q ss_pred HHHHHHhCCCceEEEECCCCc-hHHHHHHHhcCC-CeEEEEecCCccccCCCChhhHHhhhhhhccchhhhHHHHHhccC
Q 003726 387 NEIAAELQGVPDLIIGNYSDG-NLVATLLSYKLG-VTQCNIAHALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNNA 464 (800)
Q Consensus 387 ~~ll~~~~~~PDIIh~h~~~~-~lva~lla~~~g-ip~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~A 464 (800)
..+++ ..+|||||+|...+ ++++.++++..+ +|++++.|+..... .+. ..+ + +. ...+.+++.|
T Consensus 67 ~k~ik--~~~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~hg~~~~~--~~~-~~~-~---~~-----~~~~~~~k~~ 132 (139)
T PF13477_consen 67 RKIIK--KEKPDVIHCHTPSPYGLFAMLAKKLLKNKKVIYTVHGSDFYN--SSK-KKK-L---KK-----FIIKFAFKRA 132 (139)
T ss_pred HHHhc--cCCCCEEEEecCChHHHHHHHHHHHcCCCCEEEEecCCeeec--CCc-hHH-H---HH-----HHHHHHHHhC
Confidence 33344 34899999999887 788888989998 99999999864311 111 110 0 01 1345689999
Q ss_pred CEEEecC
Q 003726 465 DFIITST 471 (800)
Q Consensus 465 D~IIt~S 471 (800)
|.|++.|
T Consensus 133 ~~ii~~~ 139 (139)
T PF13477_consen 133 DKIIVQS 139 (139)
T ss_pred CEEEEcC
Confidence 9999875
No 119
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=98.41 E-value=0.0002 Score=83.77 Aligned_cols=138 Identities=12% Similarity=0.004 Sum_probs=90.4
Q ss_pred CcEEEEEecCCCC-----CCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEc
Q 003726 561 KPLIFSMARLDGV-----KNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWI 635 (800)
Q Consensus 561 k~iIl~vGRL~~~-----Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~fl 635 (800)
.+++++.|..... +-+..+++|++++. .++++..++.. .. .+++++|.+.
T Consensus 297 g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l~-----~~viw~~~~~~------------~~--------~~~p~Nv~i~ 351 (507)
T PHA03392 297 GVVYVSFGSSIDTNDMDNEFLQMLLRTFKKLP-----YNVLWKYDGEV------------EA--------INLPANVLTQ 351 (507)
T ss_pred cEEEEECCCCCcCCCCCHHHHHHHHHHHHhCC-----CeEEEEECCCc------------Cc--------ccCCCceEEe
Confidence 4678899987532 23455666666542 46666655433 00 2456899988
Q ss_pred ccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcC----ccccccccccCceEEEECCC--CHHH
Q 003726 636 SAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATC----HGGPAEIIEHGVSGFHIDPY--HPDQ 709 (800)
Q Consensus 636 G~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~----~GG~~EiI~dg~~G~lv~p~--d~e~ 709 (800)
+ +++..++... . .+++||.= |=..++.||+.+|+|+|+.. ....+..+++-+.|..++.. +.++
T Consensus 352 ~----w~Pq~~lL~h-p-~v~~fItH----GG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G~~l~~~~~t~~~ 421 (507)
T PHA03392 352 K----WFPQRAVLKH-K-NVKAFVTQ----GGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIGRALDTVTVSAAQ 421 (507)
T ss_pred c----CCCHHHHhcC-C-CCCEEEec----CCcccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcEEEeccCCcCHHH
Confidence 7 6677776631 1 36788863 44567999999999999974 33455566667788888754 5577
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 003726 710 VAELMIEFFEKCYNDPSHWNKISDGGLK 737 (800)
Q Consensus 710 lA~aI~~~l~~l~~dp~~~~~ms~~a~~ 737 (800)
+.++|.+++ .||.+++...+-+..
T Consensus 422 l~~ai~~vl----~~~~y~~~a~~ls~~ 445 (507)
T PHA03392 422 LVLAIVDVI----ENPKYRKNLKELRHL 445 (507)
T ss_pred HHHHHHHHh----CCHHHHHHHHHHHHH
Confidence 777776665 888877665544444
No 120
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=98.37 E-value=4.4e-05 Score=82.52 Aligned_cols=97 Identities=16% Similarity=0.274 Sum_probs=70.8
Q ss_pred CcEEEEEecCCCCCCHHHHHHHHHHhhccCCCeEEE-EEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEccccc
Q 003726 561 KPLIFSMARLDGVKNLTGLVECYGKSSKLRELVNLV-VVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISAQM 639 (800)
Q Consensus 561 k~iIl~vGRL~~~Kgl~~LleA~~~l~~~~~~v~Lv-IVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~~~ 639 (800)
+.+++++|..+..+....+++++.++. .+++++ ++|.+.. ..+++++.++.. ++|++.++
T Consensus 171 ~~iLi~~GG~d~~~~~~~~l~~l~~~~---~~~~i~vv~G~~~~-----------~~~~l~~~~~~~---~~i~~~~~-- 231 (279)
T TIGR03590 171 RRVLVSFGGADPDNLTLKLLSALAESQ---INISITLVTGSSNP-----------NLDELKKFAKEY---PNIILFID-- 231 (279)
T ss_pred CeEEEEeCCcCCcCHHHHHHHHHhccc---cCceEEEEECCCCc-----------CHHHHHHHHHhC---CCEEEEeC--
Confidence 457899999888776677888887643 344443 5555432 135566666654 47888873
Q ss_pred CccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcCc
Q 003726 640 NRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATCH 686 (800)
Q Consensus 640 ~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~~ 686 (800)
..++..+|+. ||++|.+ .|.|+.|++++|+|+|+...
T Consensus 232 ----~~~m~~lm~~-aDl~Is~-----~G~T~~E~~a~g~P~i~i~~ 268 (279)
T TIGR03590 232 ----VENMAELMNE-ADLAIGA-----AGSTSWERCCLGLPSLAICL 268 (279)
T ss_pred ----HHHHHHHHHH-CCEEEEC-----CchHHHHHHHcCCCEEEEEe
Confidence 3578999996 9999994 77999999999999998754
No 121
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=98.25 E-value=3.9e-05 Score=85.52 Aligned_cols=266 Identities=16% Similarity=0.198 Sum_probs=139.1
Q ss_pred CceEEEECCCCc-hHHHHHHHhcCCCeEEEEecCC-ccccCCCChhhHHhhhhhhccchhhhHHHHHhccCCEEEecCHH
Q 003726 396 VPDLIIGNYSDG-NLVATLLSYKLGVTQCNIAHAL-EKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNNADFIITSTYQ 473 (800)
Q Consensus 396 ~PDIIh~h~~~~-~lva~lla~~~gip~v~t~H~l-~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 473 (800)
+||+|..+.-.. .++++++|..+++|++. +|+- -......+ ..+...+ ...-+-||.-+++|+.
T Consensus 67 ~Pd~Vlv~GD~~~~la~alaA~~~~ipv~H-ieaGlRs~d~~~g-----~~de~~R--------~~i~~la~lhf~~t~~ 132 (346)
T PF02350_consen 67 KPDAVLVLGDRNEALAAALAAFYLNIPVAH-IEAGLRSGDRTEG-----MPDEINR--------HAIDKLAHLHFAPTEE 132 (346)
T ss_dssp T-SEEEEETTSHHHHHHHHHHHHTT-EEEE-ES-----S-TTSS-----TTHHHHH--------HHHHHH-SEEEESSHH
T ss_pred CCCEEEEEcCCchHHHHHHHHHHhCCCEEE-ecCCCCccccCCC-----Cchhhhh--------hhhhhhhhhhccCCHH
Confidence 999999876554 78889999999999544 4442 11110000 1111111 1234578888999986
Q ss_pred HHhhcccCccccccccccccccceeeeccCCCCCCceEEecC-CCCCCCCCCCChHHHHHHHhhccccccccCCcccccc
Q 003726 474 EIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFDPKFNIVSP-GADMCIYFPYSDKEKRLIALHGQIEDLLYDPKQNDEH 552 (800)
Q Consensus 474 ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~~k~~VIpn-GvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~ 552 (800)
..+.. .--|++ +.++.++.| ++|.-.. ......+.
T Consensus 133 ~~~~L--------------------~~~G~~--~~rI~~vG~~~~D~l~~----------------------~~~~~~~~ 168 (346)
T PF02350_consen 133 ARERL--------------------LQEGEP--PERIFVVGNPGIDALLQ----------------------NKEEIEEK 168 (346)
T ss_dssp HHHHH--------------------HHTT----GGGEEE---HHHHHHHH----------------------HHHTTCC-
T ss_pred HHHHH--------------------HhcCCC--CCeEEEEChHHHHHHHH----------------------hHHHHhhh
Confidence 65521 112444 678888855 2222100 00001111
Q ss_pred c---cccC-CCCCcEEEEEecCCCC---CCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHH
Q 003726 553 V---GILN-DRSKPLIFSMARLDGV---KNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQ 625 (800)
Q Consensus 553 ~---Gll~-~~~k~iIl~vGRL~~~---Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~ 625 (800)
+ ++.. .+++.++++.=|.... .....+.+++..+.+. +++++++.....+ .....+.+..++
T Consensus 169 ~~~~~i~~~~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~-~~~~vi~~~hn~p----------~~~~~i~~~l~~ 237 (346)
T PF02350_consen 169 YKNSGILQDAPKPYILVTLHPVTNEDNPERLEQILEALKALAER-QNVPVIFPLHNNP----------RGSDIIIEKLKK 237 (346)
T ss_dssp HHHHHHHHCTTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHH-TTEEEEEE--S-H----------HHHHHHHHHHTT
T ss_pred hhhHHHHhccCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhc-CCCcEEEEecCCc----------hHHHHHHHHhcc
Confidence 1 2211 2344445555444332 3456777888888776 7899999888544 123444444554
Q ss_pred cCCCCcEEEcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHH-HHHHcCCcEEEc-CccccccccccCceEEEEC
Q 003726 626 YNLHGQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVV-EAMTCGLPTFAT-CHGGPAEIIEHGVSGFHID 703 (800)
Q Consensus 626 ~gL~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vl-EAMA~GlPVIAT-~~GG~~EiI~dg~~G~lv~ 703 (800)
+ ++|++.. .+...++..+++. |++.|- ..| .+. ||.++|+|||.- +.|--.+.+..+.+-+ +.
T Consensus 238 ~---~~v~~~~----~l~~~~~l~ll~~-a~~vvg-----dSs-GI~eEa~~lg~P~v~iR~~geRqe~r~~~~nvl-v~ 302 (346)
T PF02350_consen 238 Y---DNVRLIE----PLGYEEYLSLLKN-ADLVVG-----DSS-GIQEEAPSLGKPVVNIRDSGERQEGRERGSNVL-VG 302 (346)
T ss_dssp ----TTEEEE--------HHHHHHHHHH-ESEEEE-----SSH-HHHHHGGGGT--EEECSSS-S-HHHHHTTSEEE-ET
T ss_pred c---CCEEEEC----CCCHHHHHHHHhc-ceEEEE-----cCc-cHHHHHHHhCCeEEEecCCCCCHHHHhhcceEE-eC
Confidence 4 3899996 6788999999996 877765 355 677 999999999998 4555667776665555 76
Q ss_pred CCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 003726 704 PYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLTL 755 (800)
Q Consensus 704 p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~l 755 (800)
.|.+++.++|.+++ .+++.+.++.. ...-|.-...++++.++
T Consensus 303 -~~~~~I~~ai~~~l----~~~~~~~~~~~-----~~npYgdG~as~rI~~~ 344 (346)
T PF02350_consen 303 -TDPEAIIQAIEKAL----SDKDFYRKLKN-----RPNPYGDGNASERIVEI 344 (346)
T ss_dssp -SSHHHHHHHHHHHH----H-HHHHHHHHC-----S--TT-SS-HHHHHHHH
T ss_pred -CCHHHHHHHHHHHH----hChHHHHhhcc-----CCCCCCCCcHHHHHHHh
Confidence 68999999997776 45444444321 12344444455555544
No 122
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=98.23 E-value=2.9e-05 Score=88.71 Aligned_cols=185 Identities=12% Similarity=0.106 Sum_probs=119.2
Q ss_pred ccccccccccCCCCCcEEEEEecCCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHc
Q 003726 547 KQNDEHVGILNDRSKPLIFSMARLDGVKNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQY 626 (800)
Q Consensus 547 ~~~~~~~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~ 626 (800)
...|+.+|+ +++..++++..++ .|=-+..++++.++.+.-|+.+|++...... ..+.+.+.++++
T Consensus 273 ~~~R~~~gL--p~d~vvF~~fn~~--~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~~-----------~~~~l~~~~~~~ 337 (468)
T PF13844_consen 273 VTTRAQYGL--PEDAVVFGSFNNL--FKISPETLDLWARILKAVPNSRLWLLRFPAS-----------GEARLRRRFAAH 337 (468)
T ss_dssp EEETGGGT----SSSEEEEE-S-G--GG--HHHHHHHHHHHHHSTTEEEEEEETSTT-----------HHHHHHHHHHHT
T ss_pred ccCHHHcCC--CCCceEEEecCcc--ccCCHHHHHHHHHHHHhCCCcEEEEeeCCHH-----------HHHHHHHHHHHc
Confidence 345688999 6677666666665 4666888999999888889999998865432 135788889999
Q ss_pred CCC-CcEEEcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcCcccccc-----ccc-cCceE
Q 003726 627 NLH-GQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAE-----IIE-HGVSG 699 (800)
Q Consensus 627 gL~-~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~~GG~~E-----iI~-dg~~G 699 (800)
|++ ++|.|.+ ..+..+..+.+.. +|+++=+- .=+=|.|.+||+.+|+|||+-....... ++. =|..-
T Consensus 338 Gv~~~Ri~f~~----~~~~~ehl~~~~~-~DI~LDT~-p~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~E 411 (468)
T PF13844_consen 338 GVDPDRIIFSP----VAPREEHLRRYQL-ADICLDTF-PYNGGTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPE 411 (468)
T ss_dssp TS-GGGEEEEE-------HHHHHHHGGG--SEEE--S-SS--SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GG
T ss_pred CCChhhEEEcC----CCCHHHHHHHhhh-CCEEeeCC-CCCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCch
Confidence 996 7899987 4556777777775 99999873 3345789999999999999764222211 111 12222
Q ss_pred EEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH--hCCHHHHHHHHHHHHHH
Q 003726 700 FHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYE--RYTWKIYSERLLTLAGV 758 (800)
Q Consensus 700 ~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~--~ysw~~~a~~ll~ly~~ 758 (800)
++.. |.++..+.-.++. .|++.++.++++-+++..+ -|+-+.+++.+++.|+.
T Consensus 412 lIA~--s~~eYv~~Av~La----~D~~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~~ 466 (468)
T PF13844_consen 412 LIAD--SEEEYVEIAVRLA----TDPERLRALRAKLRDRRSKSPLFDPKRFARNLEAAYRQ 466 (468)
T ss_dssp GB-S--SHHHHHHHHHHHH----H-HHHHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHHH
T ss_pred hcCC--CHHHHHHHHHHHh----CCHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHH
Confidence 3333 6788777775554 8999999999988877654 48999999999999875
No 123
>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism]
Probab=98.18 E-value=1.2e-05 Score=88.49 Aligned_cols=99 Identities=24% Similarity=0.371 Sum_probs=62.6
Q ss_pred cCcEEEecCCCCCCcHHHHHHHHcCCcEEEcCcccccc----cccc-CceEEEE-CC--CCHHHHHHHHHHHHHHhcCCH
Q 003726 654 TRGVFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAE----IIEH-GVSGFHI-DP--YHPDQVAELMIEFFEKCYNDP 725 (800)
Q Consensus 654 aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~~GG~~E----iI~d-g~~G~lv-~p--~d~e~lA~aI~~~l~~l~~dp 725 (800)
+|.+.|+||+||++|.|..|.-.+|+|-|.|+..|..- .|++ ..-|++| |. ..+++-.+.+.+++... -..
T Consensus 500 GCHLGVFPSYYEPWGYTPAECTVMGiPSvtTNlSGFGcfMeehi~d~~ayGIYIvDRRfks~deSv~qL~~~m~~F-~~q 578 (692)
T KOG3742|consen 500 GCHLGVFPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMEEHIEDPQAYGIYIVDRRFKSPDESVQQLASFMYEF-CKQ 578 (692)
T ss_pred cccccccccccCCCCCCchheEEeccccccccccchhhhHHHHhcCchhceEEEEecccCChhhHHHHHHHHHHHH-HHH
Confidence 69999999999999999999999999999999887654 4443 3357655 21 13444444444433211 123
Q ss_pred HHHHHHHHH-HHHHHHHhCCHHHHHHHHH
Q 003726 726 SHWNKISDG-GLKRIYERYTWKIYSERLL 753 (800)
Q Consensus 726 ~~~~~ms~~-a~~~v~~~ysw~~~a~~ll 753 (800)
.+++++.++ --++...-.+|+.+..-|.
T Consensus 579 sRRQRIiqRNrtErLSdLLDWk~lG~~Y~ 607 (692)
T KOG3742|consen 579 SRRQRIIQRNRTERLSDLLDWKYLGRYYR 607 (692)
T ss_pred HHHHHHHHhcchhhHHHHHhHHHHhHHHH
Confidence 344444333 3345556677776655443
No 124
>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=98.10 E-value=9.3e-05 Score=89.09 Aligned_cols=145 Identities=16% Similarity=0.098 Sum_probs=108.8
Q ss_pred ccccccCCCCCcEEEEEecCCCCCCHHH-H---HHHHHHhhccC----CCeEEEEEeccCCCCCccchHHHHHHHHHHHH
Q 003726 551 EHVGILNDRSKPLIFSMARLDGVKNLTG-L---VECYGKSSKLR----ELVNLVVVGGYMDVKNSRDREEMAEIEKMHGL 622 (800)
Q Consensus 551 ~~~Gll~~~~k~iIl~vGRL~~~Kgl~~-L---leA~~~l~~~~----~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~l 622 (800)
+..|+.-+++...++++-|+...|...+ + ++.+.+++... ....+++.|.... .|...+..++.+..+
T Consensus 520 ~~~g~~ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP----~y~~aK~iIklI~~v 595 (797)
T cd04300 520 KTTGVEVDPDSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAP----GYYMAKLIIKLINAV 595 (797)
T ss_pred HHhCCccCCCccEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCC----CcHHHHHHHHHHHHH
Confidence 3456666899999999999999999888 4 45565565431 1255665555433 355566677777777
Q ss_pred HHH----cCCCC--cEEEcccccCccChHHHHHHHHccCcEEEecCC--CCCCcHHHHHHHHcCCcEEEcCccccccccc
Q 003726 623 IKQ----YNLHG--QFRWISAQMNRVRNGELYRYIADTRGVFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIE 694 (800)
Q Consensus 623 i~~----~gL~~--~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~--~E~fGl~vlEAMA~GlPVIAT~~GG~~EiI~ 694 (800)
++. ..+.+ +|.|+. -.+=.+.+.+-.++|+-.+-|. .|+.|..-+-+|.-|.++++|-.|...|+.+
T Consensus 596 a~~in~Dp~v~~~lkVVFle-----nY~VslAe~iipaaDvseqis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e 670 (797)
T cd04300 596 ADVVNNDPDVGDKLKVVFLP-----NYNVSLAEKIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIAE 670 (797)
T ss_pred HHHhccChhcCCceEEEEeC-----CCChHHHHHhhhhhhhhhhCCCCCccccCCchhhHHhcCceeeecccchhHHHHH
Confidence 773 33445 788885 2344667777668999999887 7999999999999999999999999999998
Q ss_pred c--CceEEEECC
Q 003726 695 H--GVSGFHIDP 704 (800)
Q Consensus 695 d--g~~G~lv~p 704 (800)
+ +.++|+|-.
T Consensus 671 ~vG~eN~fiFG~ 682 (797)
T cd04300 671 EVGEENIFIFGL 682 (797)
T ss_pred HhCcCcEEEeCC
Confidence 7 789999943
No 125
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=97.96 E-value=0.00035 Score=79.60 Aligned_cols=158 Identities=16% Similarity=0.076 Sum_probs=104.2
Q ss_pred CCCcEEEEEecCCCCCCHHHHHHH-HHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEccc
Q 003726 559 RSKPLIFSMARLDGVKNLTGLVEC-YGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISA 637 (800)
Q Consensus 559 ~~k~iIl~vGRL~~~Kgl~~LleA-~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~ 637 (800)
+.+++.++.|..... ..+++. ...+.+ -++++++..++.+ . ..-++++++...+
T Consensus 236 d~~~vyvslGt~~~~---~~l~~~~~~a~~~--l~~~vi~~~~~~~------------------~-~~~~~p~n~~v~~- 290 (406)
T COG1819 236 DRPIVYVSLGTVGNA---VELLAIVLEALAD--LDVRVIVSLGGAR------------------D-TLVNVPDNVIVAD- 290 (406)
T ss_pred CCCeEEEEcCCcccH---HHHHHHHHHHHhc--CCcEEEEeccccc------------------c-ccccCCCceEEec-
Confidence 345566677776544 344433 333333 3577777776622 0 1235678999887
Q ss_pred ccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcCcc----ccccccccCceEEEEC--CCCHHHHH
Q 003726 638 QMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATCHG----GPAEIIEHGVSGFHID--PYHPDQVA 711 (800)
Q Consensus 638 ~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~~G----G~~EiI~dg~~G~lv~--p~d~e~lA 711 (800)
.++..++.. .+|++|+. |=-.++.||+..|+|+|+-..+ ..++-+++-+.|..+. ..+.+.++
T Consensus 291 ---~~p~~~~l~----~ad~vI~h----GG~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~G~G~~l~~~~l~~~~l~ 359 (406)
T COG1819 291 ---YVPQLELLP----RADAVIHH----GGAGTTSEALYAGVPLVVIPDGADQPLNAERVEELGAGIALPFEELTEERLR 359 (406)
T ss_pred ---CCCHHHHhh----hcCEEEec----CCcchHHHHHHcCCCEEEecCCcchhHHHHHHHHcCCceecCcccCCHHHHH
Confidence 566666555 59999996 3334689999999999997433 3566777888998887 57899999
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003726 712 ELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLTLAG 757 (800)
Q Consensus 712 ~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 757 (800)
++|.+++ .|+..++...+ ..+.+.+.-.-+..++.++++.+
T Consensus 360 ~av~~vL----~~~~~~~~~~~-~~~~~~~~~g~~~~a~~le~~~~ 400 (406)
T COG1819 360 AAVNEVL----ADDSYRRAAER-LAEEFKEEDGPAKAADLLEEFAR 400 (406)
T ss_pred HHHHHHh----cCHHHHHHHHH-HHHHhhhcccHHHHHHHHHHHHh
Confidence 9997776 88876655444 34444456666666666666543
No 126
>PLN02448 UDP-glycosyltransferase family protein
Probab=97.93 E-value=0.0097 Score=69.00 Aligned_cols=140 Identities=13% Similarity=0.122 Sum_probs=78.6
Q ss_pred CCcEEEEEecCCCC--CCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEccc
Q 003726 560 SKPLIFSMARLDGV--KNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISA 637 (800)
Q Consensus 560 ~k~iIl~vGRL~~~--Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~ 637 (800)
...+.++.|..... +-+..++++++.. +..++++..+.. ..+.+.. .+++...+
T Consensus 274 ~~vvyvsfGs~~~~~~~~~~~~~~~l~~~-----~~~~lw~~~~~~-------------~~~~~~~-----~~~~~v~~- 329 (459)
T PLN02448 274 GSVLYVSLGSFLSVSSAQMDEIAAGLRDS-----GVRFLWVARGEA-------------SRLKEIC-----GDMGLVVP- 329 (459)
T ss_pred CceEEEeecccccCCHHHHHHHHHHHHhC-----CCCEEEEEcCch-------------hhHhHhc-----cCCEEEec-
Confidence 44677788876431 2234444444432 467777655321 1111111 24566665
Q ss_pred ccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcC----ccccccccccC-ceEEEECC-------C
Q 003726 638 QMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATC----HGGPAEIIEHG-VSGFHIDP-------Y 705 (800)
Q Consensus 638 ~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~----~GG~~EiI~dg-~~G~lv~p-------~ 705 (800)
+++..++... . +.++||.= +=-++++||+++|+|+|+-. .......+.+. +.|+-+.. -
T Consensus 330 ---w~pQ~~iL~h-~-~v~~fvtH----gG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~ 400 (459)
T PLN02448 330 ---WCDQLKVLCH-S-SVGGFWTH----CGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREVGEETLV 400 (459)
T ss_pred ---cCCHHHHhcc-C-ccceEEec----CchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEecccccCCcC
Confidence 6667777763 1 13345542 33358999999999999974 33445555553 46776631 3
Q ss_pred CHHHHHHHHHHHHHHhcCCH-HHHHHHHHHHH
Q 003726 706 HPDQVAELMIEFFEKCYNDP-SHWNKISDGGL 736 (800)
Q Consensus 706 d~e~lA~aI~~~l~~l~~dp-~~~~~ms~~a~ 736 (800)
+.+++++++.+++ .++ +..++|.+++.
T Consensus 401 ~~~~l~~av~~vl----~~~~~~~~~~r~~a~ 428 (459)
T PLN02448 401 GREEIAELVKRFM----DLESEEGKEMRRRAK 428 (459)
T ss_pred cHHHHHHHHHHHh----cCCchhHHHHHHHHH
Confidence 6778888887766 553 33344444444
No 127
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=97.91 E-value=0.00074 Score=77.46 Aligned_cols=181 Identities=13% Similarity=0.149 Sum_probs=124.1
Q ss_pred ccccccCCCCCcEEEEEecCCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCC-
Q 003726 551 EHVGILNDRSKPLIFSMARLDGVKNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLH- 629 (800)
Q Consensus 551 ~~~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~- 629 (800)
...|+ +++..++++.++. .|-...+++.+.++.+.-|+-.|++.|+|++ .+....+++++++.|++
T Consensus 422 ~~lgl--p~~avVf~c~~n~--~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~---------~~~~~~l~~la~~~Gv~~ 488 (620)
T COG3914 422 AQLGL--PEDAVVFCCFNNY--FKITPEVFALWMQILSAVPNSVLLLKAGGDD---------AEINARLRDLAEREGVDS 488 (620)
T ss_pred hhcCC--CCCeEEEEecCCc--ccCCHHHHHHHHHHHHhCCCcEEEEecCCCc---------HHHHHHHHHHHHHcCCCh
Confidence 56888 6666666666654 4555566665566666779999999999866 24578899999999995
Q ss_pred CcEEEcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEc-------Cccccccccc-cCceEEE
Q 003726 630 GQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFAT-------CHGGPAEIIE-HGVSGFH 701 (800)
Q Consensus 630 ~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT-------~~GG~~EiI~-dg~~G~l 701 (800)
++++|.+ +.++++....+.- +|+++=+--| +=+.|.+||+-+|+||++- ..|+ .+++ -|..-++
T Consensus 489 eRL~f~p----~~~~~~h~a~~~i-ADlvLDTyPY-~g~TTa~daLwm~vPVlT~~G~~FasR~~~--si~~~agi~e~v 560 (620)
T COG3914 489 ERLRFLP----PAPNEDHRARYGI-ADLVLDTYPY-GGHTTASDALWMGVPVLTRVGEQFASRNGA--SIATNAGIPELV 560 (620)
T ss_pred hheeecC----CCCCHHHHHhhch-hheeeecccC-CCccchHHHHHhcCceeeeccHHHHHhhhH--HHHHhcCCchhh
Confidence 7999998 6667777777775 9988865333 4467899999999999864 2222 1222 1333333
Q ss_pred ECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH--hCCHHHHHHHHHHHHHH
Q 003726 702 IDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYE--RYTWKIYSERLLTLAGV 758 (800)
Q Consensus 702 v~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~--~ysw~~~a~~ll~ly~~ 758 (800)
.+ +.++..++-..+= .|...+++.+..-.+.... -|+.+.+++++.++|..
T Consensus 561 A~--s~~dYV~~av~~g----~dral~q~~r~~l~~~r~tspL~d~~~far~le~~y~~ 613 (620)
T COG3914 561 AD--SRADYVEKAVAFG----SDRALRQQVRAELKRSRQTSPLFDPKAFARKLETLYWG 613 (620)
T ss_pred cC--CHHHHHHHHHHhc----ccHHHHHhhHHHHHhccccCcccCHHHHHHHHHHHHHH
Confidence 43 4555555554443 6777777766655554433 58899999999999853
No 128
>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.
Probab=97.84 E-value=0.00034 Score=84.08 Aligned_cols=144 Identities=18% Similarity=0.120 Sum_probs=106.4
Q ss_pred ccccccCCCCCcEEEEEecCCCCCCHHH-HH---HHHHHhhccC----CCeEEEEEeccCCCCCccchHHHHHHHHHHHH
Q 003726 551 EHVGILNDRSKPLIFSMARLDGVKNLTG-LV---ECYGKSSKLR----ELVNLVVVGGYMDVKNSRDREEMAEIEKMHGL 622 (800)
Q Consensus 551 ~~~Gll~~~~k~iIl~vGRL~~~Kgl~~-Ll---eA~~~l~~~~----~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~l 622 (800)
++.|+.-+++....+++-|+...|...+ ++ +.+.++++.. ....+++.|.... .|...+..++.+..+
T Consensus 517 ~~~g~~ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP----~y~~aK~iIklI~~v 592 (794)
T TIGR02093 517 EHTGVEVDPNSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAP----GYHMAKLIIKLINSV 592 (794)
T ss_pred HhcCCccCccccchhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCC----CcHHHHHHHHHHHHH
Confidence 3456666889999999999999999888 44 4455554431 1346666665443 345555666777777
Q ss_pred HHH----cCCCC--cEEEcccccCccChHHHHHHHHccCcEEEecCC--CCCCcHHHHHHHHcCCcEEEcCccccccccc
Q 003726 623 IKQ----YNLHG--QFRWISAQMNRVRNGELYRYIADTRGVFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIE 694 (800)
Q Consensus 623 i~~----~gL~~--~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~--~E~fGl~vlEAMA~GlPVIAT~~GG~~EiI~ 694 (800)
++. ..+.+ +|.|+. -.+=.+.+.+-.++|+-.+-|. .|+.|..-+-+|.-|.++++|-.|...|+.+
T Consensus 593 a~~iN~Dp~v~~~lkVVFle-----nY~VslAe~iipaaDvseqistag~EASGTsnMK~alNGaltlgtlDGanvEi~e 667 (794)
T TIGR02093 593 AEVVNNDPAVGDKLKVVFVP-----NYNVSLAELIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIRE 667 (794)
T ss_pred HHHhccChhhCCceeEEEeC-----CCChHHHHHhhhhhhhhhhCCCCCccccCcchhHHHhcCcceeecccchhHHHHH
Confidence 644 22345 788885 2344666676667999999887 7999999999999999999999999999998
Q ss_pred c--CceEEEEC
Q 003726 695 H--GVSGFHID 703 (800)
Q Consensus 695 d--g~~G~lv~ 703 (800)
+ +.++|+|-
T Consensus 668 ~vG~eN~fiFG 678 (794)
T TIGR02093 668 EVGAENIFIFG 678 (794)
T ss_pred HhCcccEEEcC
Confidence 7 78999994
No 129
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=97.83 E-value=0.0011 Score=74.30 Aligned_cols=144 Identities=21% Similarity=0.271 Sum_probs=90.1
Q ss_pred CCCCcEE-EEEec-CCC-CCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEE
Q 003726 558 DRSKPLI-FSMAR-LDG-VKNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRW 634 (800)
Q Consensus 558 ~~~k~iI-l~vGR-L~~-~Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~f 634 (800)
++++++| +..|+ -.+ .+.+..+++++.++.+.+|++++++...... ..+.+.+.....+..-.+..
T Consensus 181 ~~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~~~p~l~fvvp~a~~~-----------~~~~i~~~~~~~~~~~~~~~ 249 (373)
T PF02684_consen 181 DPDKPIIALLPGSRKSEIKRLLPIFLEAAKLLKKQRPDLQFVVPVAPEV-----------HEELIEEILAEYPPDVSIVI 249 (373)
T ss_pred CCCCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCCHH-----------HHHHHHHHHHhhCCCCeEEE
Confidence 5566654 44453 333 4566889999999999999999998876533 12334555555554334443
Q ss_pred cccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcCcccc-----------------ccccccCc
Q 003726 635 ISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGP-----------------AEIIEHGV 697 (800)
Q Consensus 635 lG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~~GG~-----------------~EiI~dg~ 697 (800)
. .++-+..++. ||+.+.. .|.+.+|++.+|+|.|..--..+ +.++-+..
T Consensus 250 ~--------~~~~~~~m~~-ad~al~~-----SGTaTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~ 315 (373)
T PF02684_consen 250 I--------EGESYDAMAA-ADAALAA-----SGTATLEAALLGVPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGRE 315 (373)
T ss_pred c--------CCchHHHHHh-Ccchhhc-----CCHHHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCC
Confidence 3 2467778885 8887764 79999999999999998732222 11111100
Q ss_pred --eEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHH
Q 003726 698 --SGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNK 730 (800)
Q Consensus 698 --~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ 730 (800)
-=++-+.-+++.+++++.+++ .|++.++.
T Consensus 316 v~PEliQ~~~~~~~i~~~~~~ll----~~~~~~~~ 346 (373)
T PF02684_consen 316 VVPELIQEDATPENIAAELLELL----ENPEKRKK 346 (373)
T ss_pred cchhhhcccCCHHHHHHHHHHHh----cCHHHHHH
Confidence 001123457888888886666 77765333
No 130
>PRK14986 glycogen phosphorylase; Provisional
Probab=97.81 E-value=0.00031 Score=84.66 Aligned_cols=151 Identities=15% Similarity=0.129 Sum_probs=114.2
Q ss_pred cccccCCCCCcEEEEEecCCCCCCHHH-HHH---HHHHhhccC----CCeEEEEEeccCCCCCccchHHHHHHHHHHHHH
Q 003726 552 HVGILNDRSKPLIFSMARLDGVKNLTG-LVE---CYGKSSKLR----ELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLI 623 (800)
Q Consensus 552 ~~Gll~~~~k~iIl~vGRL~~~Kgl~~-Lle---A~~~l~~~~----~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li 623 (800)
..|+.-+++...++++-|+...|...+ ++. -+.+++... ....+++.|.... .|...+..++.+..++
T Consensus 534 ~~g~~ldp~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP----~y~~aK~iIk~I~~va 609 (815)
T PRK14986 534 QLNVVVNPKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAAS----AYYMAKHIIHLINDVA 609 (815)
T ss_pred HhCCccCcccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCC----CcHHHHHHHHHHHHHH
Confidence 346666889999999999999999888 554 455554431 2366666666543 4566677778888888
Q ss_pred H----HcCCCC--cEEEcccccCccChHHHHHHHHccCcEEEecCC--CCCCcHHHHHHHHcCCcEEEcCcccccccccc
Q 003726 624 K----QYNLHG--QFRWISAQMNRVRNGELYRYIADTRGVFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH 695 (800)
Q Consensus 624 ~----~~gL~~--~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~--~E~fGl~vlEAMA~GlPVIAT~~GG~~EiI~d 695 (800)
+ ...+.+ +|.|+. -.+=.+.+.+-.++|+-.+-|. .|+.|..-+-||.-|.++++|-.|...|+.++
T Consensus 610 ~~in~Dp~v~~~lkVVFle-----nY~vslAe~lipg~Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~nvEi~e~ 684 (815)
T PRK14986 610 KVINNDPQIGDKLKVVFIP-----NYSVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLEH 684 (815)
T ss_pred HHhccChhhcCceeEEEeC-----CCCHHHHHHhhhhhhhhhhCCCCCccccCcchhhHHhcCceeeeccCCchhHHHHh
Confidence 7 334445 788885 2345677777778999999887 79999999999999999999999999999986
Q ss_pred --CceEEEECCCCHHHHHH
Q 003726 696 --GVSGFHIDPYHPDQVAE 712 (800)
Q Consensus 696 --g~~G~lv~p~d~e~lA~ 712 (800)
+.+||.|-. +.+++++
T Consensus 685 vG~eN~~~fG~-~~~ev~~ 702 (815)
T PRK14986 685 VGEENIFIFGN-TAEEVEA 702 (815)
T ss_pred cCCCcEEEeCC-CHHHHHH
Confidence 889999954 4555544
No 131
>PRK14985 maltodextrin phosphorylase; Provisional
Probab=97.75 E-value=0.00025 Score=85.04 Aligned_cols=144 Identities=15% Similarity=0.040 Sum_probs=106.7
Q ss_pred cccccCCCCCcEEEEEecCCCCCCHHH-HHH---HHHHhhccC----CCeEEEEEeccCCCCCccchHHHHHHHHHHHHH
Q 003726 552 HVGILNDRSKPLIFSMARLDGVKNLTG-LVE---CYGKSSKLR----ELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLI 623 (800)
Q Consensus 552 ~~Gll~~~~k~iIl~vGRL~~~Kgl~~-Lle---A~~~l~~~~----~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li 623 (800)
+.|+.-+++...++++-|+...|...+ ++. .+.++++.. ....+++.|.... .|...+..++.+..++
T Consensus 520 ~~g~~ldp~slfdvq~kR~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP----~y~~aK~iIklI~~va 595 (798)
T PRK14985 520 RTGIEINPQAIFDVQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAP----GYYLAKNIIFAINKVA 595 (798)
T ss_pred HhCCccCchhcchhhHhhhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCC----CcHHHHHHHHHHHHHH
Confidence 346666888899999999999999888 544 444444331 1266666666543 3555666667777777
Q ss_pred HHcC----CCC--cEEEcccccCccChHHHHHHHHccCcEEEecCC--CCCCcHHHHHHHHcCCcEEEcCcccccccccc
Q 003726 624 KQYN----LHG--QFRWISAQMNRVRNGELYRYIADTRGVFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH 695 (800)
Q Consensus 624 ~~~g----L~~--~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~--~E~fGl~vlEAMA~GlPVIAT~~GG~~EiI~d 695 (800)
+..+ +.+ +|.|+. -.+=.+.+.+-.++|+-.+-|. .|+.|..-+-+|.-|.++++|-.|...|+.++
T Consensus 596 ~~in~Dp~v~~~lkVVFle-----nY~VslAe~lipaaDvseqis~ag~EASGTsnMK~amNGaLtlgtlDGanvEi~e~ 670 (798)
T PRK14985 596 EVINNDPLVGDKLKVVFLP-----DYCVSAAELLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEQ 670 (798)
T ss_pred HHhcCChhhCCceeEEEeC-----CCChHHHHHHhhhhhhhhhCCCCCccccCcchhHHHhcCceeeecccchHHHHHHH
Confidence 5442 344 788885 2344667777668999999887 79999999999999999999999999999876
Q ss_pred --CceEEEECC
Q 003726 696 --GVSGFHIDP 704 (800)
Q Consensus 696 --g~~G~lv~p 704 (800)
+.+||.|-.
T Consensus 671 vG~eN~f~fG~ 681 (798)
T PRK14985 671 VGEENIFIFGH 681 (798)
T ss_pred hCcCcEEEeCC
Confidence 789999953
No 132
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=97.71 E-value=0.0076 Score=66.84 Aligned_cols=62 Identities=16% Similarity=0.231 Sum_probs=43.1
Q ss_pred HHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcCccc---cccccccCceEEEECCCCHHHHHHHHHHH
Q 003726 648 YRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG---PAEIIEHGVSGFHIDPYHPDQVAELMIEF 717 (800)
Q Consensus 648 ~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~~GG---~~EiI~dg~~G~lv~p~d~e~lA~aI~~~ 717 (800)
..+++- ||++|- +-|....||...|+|+|.+..|- .-+.+.+ .|+++.-.|++++.+.+...
T Consensus 243 ~~Ll~~-a~l~Ig-----~ggTMa~EAA~LGtPaIs~~~g~~~~vd~~L~~--~Gll~~~~~~~ei~~~v~~~ 307 (335)
T PF04007_consen 243 LDLLYY-ADLVIG-----GGGTMAREAALLGTPAISCFPGKLLAVDKYLIE--KGLLYHSTDPDEIVEYVRKN 307 (335)
T ss_pred HHHHHh-cCEEEe-----CCcHHHHHHHHhCCCEEEecCCcchhHHHHHHH--CCCeEecCCHHHHHHHHHHh
Confidence 345553 888886 45677899999999999875442 2233323 47788878999988866443
No 133
>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]
Probab=97.55 E-value=0.0022 Score=76.61 Aligned_cols=143 Identities=19% Similarity=0.153 Sum_probs=112.6
Q ss_pred ccccCCCCCcEEEEEecCCCCCCHHHHH----HHHHHhh-ccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcC
Q 003726 553 VGILNDRSKPLIFSMARLDGVKNLTGLV----ECYGKSS-KLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYN 627 (800)
Q Consensus 553 ~Gll~~~~k~iIl~vGRL~~~Kgl~~Ll----eA~~~l~-~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~g 627 (800)
.|+..+++...++++-|+.++|.....+ ..+..++ ...|.+.+++.|.... .|...+..+..+...++..+
T Consensus 479 ~gi~~~p~~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP----~y~~aK~iIk~I~~~a~~in 554 (750)
T COG0058 479 TGIEVDPNALFDGQARRIHEYKRQLLNLLDIERLYRILKEDWVPRVQIIFAGKAHP----ADYAAKEIIKLINDVADVIN 554 (750)
T ss_pred cCCccCCCcceeeeehhhhhhhhhHHhHhhHHHHHHHHhcCCCCceEEEEeccCCC----cchHHHHHHHHHHHHHHhhc
Confidence 4555578899999999999999877665 3444444 3335566666665544 56777788888889999877
Q ss_pred CCCcEEEcccccCccChHHHHHHHHccCcEEEecCC--CCCCcHHHHHHHHcCCcEEEcCccccccccc--cCceEEEEC
Q 003726 628 LHGQFRWISAQMNRVRNGELYRYIADTRGVFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIE--HGVSGFHID 703 (800)
Q Consensus 628 L~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~--~E~fGl~vlEAMA~GlPVIAT~~GG~~EiI~--dg~~G~lv~ 703 (800)
...+|.|+. -.+-.+.+.+-.++||-.+-|. .|+.|.+-+-||.-|.++|+|-.|...|+.+ .+.+||+|-
T Consensus 555 ~~lkVvFl~-----nYdvslA~~iipa~Dvweqis~a~~EASGTsnMK~alNGaltigtlDGanvEi~e~vg~~N~~~fG 629 (750)
T COG0058 555 NKLKVVFLP-----NYDVSLAELLIPAADVWEQIPTAGKEASGTSNMKAALNGALTLGTLDGANVEIYEHVGGENGWIFG 629 (750)
T ss_pred ccceEEEeC-----CCChhHHHhhcccccccccCCCCCccccCcCcchHHhcCCceeeccccHHHHHHHhcCCCceEEeC
Confidence 778899995 2344566676667999998877 7999999999999999999999999999997 899999995
Q ss_pred C
Q 003726 704 P 704 (800)
Q Consensus 704 p 704 (800)
.
T Consensus 630 ~ 630 (750)
T COG0058 630 E 630 (750)
T ss_pred C
Confidence 4
No 134
>PLN02208 glycosyltransferase family protein
Probab=97.38 E-value=0.35 Score=55.85 Aligned_cols=92 Identities=10% Similarity=0.107 Sum_probs=56.1
Q ss_pred cEEEcccccCccChHHHHHHHHccCcEEEecCCCCCCc-HHHHHHHHcCCcEEEc----Ccccccccccc-CceEEEECC
Q 003726 631 QFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFG-LTVVEAMTCGLPTFAT----CHGGPAEIIEH-GVSGFHIDP 704 (800)
Q Consensus 631 ~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fG-l~vlEAMA~GlPVIAT----~~GG~~EiI~d-g~~G~lv~p 704 (800)
++.+.+ +++..++...= +.++||. -+| ++++||+++|+|+|+- |.......+.+ -+.|..++.
T Consensus 312 g~~v~~----W~PQ~~iL~H~--~v~~Fvt-----HcG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~ 380 (442)
T PLN02208 312 GVVWGG----WVQQPLILDHP--SIGCFVN-----HCGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSR 380 (442)
T ss_pred CcEeec----cCCHHHHhcCC--ccCeEEc-----cCCchHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEecc
Confidence 455555 56667766531 1234443 244 5799999999999997 33334554444 467887754
Q ss_pred -----CCHHHHHHHHHHHHHHhcCCH-HHHHHHHHHHHH
Q 003726 705 -----YHPDQVAELMIEFFEKCYNDP-SHWNKISDGGLK 737 (800)
Q Consensus 705 -----~d~e~lA~aI~~~l~~l~~dp-~~~~~ms~~a~~ 737 (800)
-+.++++++|.+++ .++ +..+++.+++++
T Consensus 381 ~~~~~~~~~~l~~ai~~~m----~~~~e~g~~~r~~~~~ 415 (442)
T PLN02208 381 EKTGWFSKESLSNAIKSVM----DKDSDLGKLVRSNHTK 415 (442)
T ss_pred ccCCcCcHHHHHHHHHHHh----cCCchhHHHHHHHHHH
Confidence 36778888887766 554 334444444443
No 135
>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.33 E-value=0.019 Score=63.46 Aligned_cols=193 Identities=13% Similarity=0.107 Sum_probs=123.5
Q ss_pred CceEEecCCCCCCCCCCCChHHHHHHHhhccccccccCCccccccccccCCCCCcEEEEEecCCCCCCHHHHHHHHHHhh
Q 003726 508 PKFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLYDPKQNDEHVGILNDRSKPLIFSMARLDGVKNLTGLVECYGKSS 587 (800)
Q Consensus 508 ~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~l~ 587 (800)
.+...++.++|.+.|.|.+.... -.--+.++|+..+. -++.+-+.+-.-.
T Consensus 161 ~~~~~~~~a~d~~~~~~i~~da~-----------------------------~~~dL~~ign~~pD-r~e~~ke~~~~ps 210 (373)
T COG4641 161 RNCYYLPWAVDDSLFHPIPPDAS-----------------------------YDVDLNLIGNPYPD-RVEEIKEFFVEPS 210 (373)
T ss_pred cceeccCccCCchhcccCCcccc-----------------------------ceeeeEEecCCCcc-HHHHHHHHhhccc
Confidence 45778899999999998764321 11136777876553 2222222222111
Q ss_pred -ccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEcccccCccChHHHHHHHHccCcEEEecCC---
Q 003726 588 -KLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISAQMNRVRNGELYRYIADTRGVFVQPAF--- 663 (800)
Q Consensus 588 -~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~--- 663 (800)
++..+-++.+.|.... .. +-..--.+++..+|... +.+.+..++.. .++++.-++
T Consensus 211 ~kl~v~rr~~~~g~~y~-------------~~----~~~~~~~~~~~yIg~~~---~~~~v~~~~~~-~~~~~n~~r~~~ 269 (373)
T COG4641 211 FKLMVDRRFYVLGPRYP-------------DD----IWGRTWEPNVQYIGYYN---PKDGVPNAFKR-DDVTLNINRASI 269 (373)
T ss_pred hhhhccceeeecCCccc-------------hh----hhcccccchhhhhhccC---ccchhhhcccc-cceeeeecHHHH
Confidence 1112245666666522 01 11111134666666321 22566666654 667665443
Q ss_pred CCC---CcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 003726 664 YEA---FGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIY 740 (800)
Q Consensus 664 ~E~---fGl~vlEAMA~GlPVIAT~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~ 740 (800)
-++ +.+-+.|+|+||.|-+++...+..-.+.+|..=++.. |..++.+++...+ ..++.++++.+.|.+++.
T Consensus 270 ~~~l~~~~~RvFeiagc~~~liT~~~~~~e~~f~pgk~~iv~~--d~kdl~~~~~yll----~h~~erkeiae~~ye~V~ 343 (373)
T COG4641 270 ANALFSPTNRVFEIAGCGGFLITDYWKDLEKFFKPGKDIIVYQ--DSKDLKEKLKYLL----NHPDERKEIAECAYERVL 343 (373)
T ss_pred HhhcCCchhhHHHHhhcCCccccccHHHHHHhcCCchheEEec--CHHHHHHHHHHHh----cCcchHHHHHHhhHHHHH
Confidence 122 3788999999999999888888888887776555444 8999999996655 899999999999999999
Q ss_pred HhCCHHHHHHHHHHHHH
Q 003726 741 ERYTWKIYSERLLTLAG 757 (800)
Q Consensus 741 ~~ysw~~~a~~ll~ly~ 757 (800)
..||.+.-+..+++...
T Consensus 344 ~~ht~~~r~~~~~~~i~ 360 (373)
T COG4641 344 ARHTYEERIFKLLNEIA 360 (373)
T ss_pred HhccHHHHHHHHHHHHH
Confidence 99999988877776544
No 136
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=97.31 E-value=0.0014 Score=65.68 Aligned_cols=111 Identities=18% Similarity=0.225 Sum_probs=61.6
Q ss_pred HHHHHHHHhCCCceEEEECCCCchHHHHHHHhcC-CCeEEEEe---cCCccccCCCChhhHHhhhhhhccchhhhHHHHH
Q 003726 385 ASNEIAAELQGVPDLIIGNYSDGNLVATLLSYKL-GVTQCNIA---HALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTA 460 (800)
Q Consensus 385 ~~~~ll~~~~~~PDIIh~h~~~~~lva~lla~~~-gip~v~t~---H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a 460 (800)
++.++.++ +..||||++|...|..+ .++..+ ++|++.-+ +........+..-.-...........+-+.....
T Consensus 56 a~~~L~~~-Gf~PDvI~~H~GWGe~L--flkdv~P~a~li~Y~E~~y~~~g~d~~FDpe~p~~~~~~~~~r~rN~~~l~~ 132 (171)
T PF12000_consen 56 AARQLRAQ-GFVPDVIIAHPGWGETL--FLKDVFPDAPLIGYFEFYYRASGADVGFDPEFPPSLDDRARLRMRNAHNLLA 132 (171)
T ss_pred HHHHHHHc-CCCCCEEEEcCCcchhh--hHHHhCCCCcEEEEEEEEecCCCCcCCCCCCCCCCHHHHHHHHHHhHHHHHH
Confidence 34444443 77899999999887332 344444 56655421 1111111111000001122222222333445678
Q ss_pred hccCCEEEecCHHHHhhcccCccccccccccccccceeeeccCCCCCCceEEecCCCCCCCC
Q 003726 461 MNNADFIITSTYQEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIY 522 (800)
Q Consensus 461 ~~~AD~IIt~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~~k~~VIpnGvD~~~f 522 (800)
+..||..|+.|.-.... .|. .+.+|+.||+-|||++.+
T Consensus 133 l~~~D~~isPT~wQ~~~---------------fP~---------~~r~kI~VihdGiDt~~~ 170 (171)
T PF12000_consen 133 LEQADAGISPTRWQRSQ---------------FPA---------EFRSKISVIHDGIDTDRF 170 (171)
T ss_pred HHhCCcCcCCCHHHHHh---------------CCH---------HHHcCcEEeecccchhhc
Confidence 89999999999865542 122 235799999999999865
No 137
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=97.24 E-value=0.41 Score=55.02 Aligned_cols=105 Identities=12% Similarity=0.184 Sum_probs=61.1
Q ss_pred HHHHHHcCCCCcEEEcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcCcc----cccccccc
Q 003726 620 HGLIKQYNLHGQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATCHG----GPAEIIEH 695 (800)
Q Consensus 620 ~~li~~~gL~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~~G----G~~EiI~d 695 (800)
+++.+.++-..+++.+. +.....++..+++. +|++|-.-.+ .++=|++.|+|+|+-... |..+.+
T Consensus 297 ~~l~~~~~~~~~~~vi~---~~~~~~e~~~iIs~-~dl~ig~RlH-----a~I~a~~~gvP~i~i~Y~~K~~~~~~~l-- 365 (426)
T PRK10017 297 LNLRQHVSDPARYHVVM---DELNDLEMGKILGA-CELTVGTRLH-----SAIISMNFGTPAIAINYEHKSAGIMQQL-- 365 (426)
T ss_pred HHHHHhcccccceeEec---CCCChHHHHHHHhh-CCEEEEecch-----HHHHHHHcCCCEEEeeehHHHHHHHHHc--
Confidence 44445544334455443 12345688888986 9988765332 478899999999997432 333333
Q ss_pred CceEEEECC--CCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 003726 696 GVSGFHIDP--YHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRI 739 (800)
Q Consensus 696 g~~G~lv~p--~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v 739 (800)
|...++++. -+.+++.+++.+++ +|.+.+++.-+.+.+..
T Consensus 366 g~~~~~~~~~~l~~~~Li~~v~~~~----~~r~~~~~~l~~~v~~~ 407 (426)
T PRK10017 366 GLPEMAIDIRHLLDGSLQAMVADTL----GQLPALNARLAEAVSRE 407 (426)
T ss_pred CCccEEechhhCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHH
Confidence 333344443 34566777775555 77766555444444443
No 138
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=97.16 E-value=0.11 Score=58.02 Aligned_cols=276 Identities=14% Similarity=0.179 Sum_probs=161.2
Q ss_pred CCCceEEEECCCCc-hHHHHHHHhcCCCeEEEEecCCccccCCCChhhHHhhhhhhccchhhhHHHHHhccCCEEEecCH
Q 003726 394 QGVPDLIIGNYSDG-NLVATLLSYKLGVTQCNIAHALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNNADFIITSTY 472 (800)
Q Consensus 394 ~~~PDIIh~h~~~~-~lva~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~ 472 (800)
+.+||+|..|.-.. .++++++|...++|++..--++- ..+.+|..- ++ -...=.-||.-+++|.
T Consensus 90 ~~kPD~VlVhGDT~t~lA~alaa~~~~IpV~HvEAGlR-----t~~~~~PEE---~N-------R~l~~~~S~~hfapte 154 (383)
T COG0381 90 EEKPDLVLVHGDTNTTLAGALAAFYLKIPVGHVEAGLR-----TGDLYFPEE---IN-------RRLTSHLSDLHFAPTE 154 (383)
T ss_pred hhCCCEEEEeCCcchHHHHHHHHHHhCCceEEEecccc-----cCCCCCcHH---HH-------HHHHHHhhhhhcCChH
Confidence 34999999887554 67779999999999866544431 112222110 00 0112334566667776
Q ss_pred HHHhhcccCccccccccccccccceeeeccCCCCCCceEEecCCCCCCCCCCCChHHHHHHHhhccccccccCCcccccc
Q 003726 473 QEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSDKEKRLIALHGQIEDLLYDPKQNDEH 552 (800)
Q Consensus 473 ~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~~~~~ 552 (800)
...+. ....|++ +.++.|+.|-+=... .... ..+. .+ ......
T Consensus 155 ~ar~n--------------------Ll~EG~~--~~~IfvtGnt~iDal--------~~~~---~~~~---~~-~~~~~~ 197 (383)
T COG0381 155 IARKN--------------------LLREGVP--EKRIFVTGNTVIDAL--------LNTR---DRVL---ED-SKILAK 197 (383)
T ss_pred HHHHH--------------------HHHcCCC--ccceEEeCChHHHHH--------HHHH---hhhc---cc-hhhHHh
Confidence 55442 1223554 667888877431110 0000 0000 00 000011
Q ss_pred -ccccCCCCCcEEEEEecCCCC-CCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHH-HHcCCC
Q 003726 553 -VGILNDRSKPLIFSMARLDGV-KNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLI-KQYNLH 629 (800)
Q Consensus 553 -~Gll~~~~k~iIl~vGRL~~~-Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li-~~~gL~ 629 (800)
++. ..++.++++.-|-.-. +++..+++++.++.+.++++.++.--... ..+++.. +.++-.
T Consensus 198 ~~~~--~~~~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~viyp~H~~--------------~~v~e~~~~~L~~~ 261 (383)
T COG0381 198 GLDD--KDKKYILVTAHRRENVGEPLEEICEALREIAEEYPDVIVIYPVHPR--------------PRVRELVLKRLKNV 261 (383)
T ss_pred hhcc--ccCcEEEEEcchhhcccccHHHHHHHHHHHHHhCCCceEEEeCCCC--------------hhhhHHHHHHhCCC
Confidence 111 3345566666665543 89999999999998888777766544332 2333444 455655
Q ss_pred CcEEEcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcC-ccccccccccCceEEEECCCCHH
Q 003726 630 GQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATC-HGGPAEIIEHGVSGFHIDPYHPD 708 (800)
Q Consensus 630 ~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~-~GG~~EiI~dg~~G~lv~p~d~e 708 (800)
.+|..+. ++...+...++.. | .+++. ..|-..=||-..|+||+.-+ .-.-+|.++.| +-.++.. +.+
T Consensus 262 ~~v~li~----pl~~~~f~~L~~~-a-~~ilt----DSGgiqEEAp~lg~Pvl~lR~~TERPE~v~ag-t~~lvg~-~~~ 329 (383)
T COG0381 262 ERVKLID----PLGYLDFHNLMKN-A-FLILT----DSGGIQEEAPSLGKPVLVLRDTTERPEGVEAG-TNILVGT-DEE 329 (383)
T ss_pred CcEEEeC----CcchHHHHHHHHh-c-eEEEe----cCCchhhhHHhcCCcEEeeccCCCCccceecC-ceEEeCc-cHH
Confidence 6799885 6777888888876 5 33333 34555789999999999974 34556766443 5566654 667
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003726 709 QVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLTLAGV 758 (800)
Q Consensus 709 ~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 758 (800)
.+.+++..++ .+++..++|+... ..|.=...++++.++...
T Consensus 330 ~i~~~~~~ll----~~~~~~~~m~~~~-----npYgdg~as~rIv~~l~~ 370 (383)
T COG0381 330 NILDAATELL----EDEEFYERMSNAK-----NPYGDGNASERIVEILLN 370 (383)
T ss_pred HHHHHHHHHh----hChHHHHHHhccc-----CCCcCcchHHHHHHHHHH
Confidence 7777776655 8888888876543 455555555666655543
No 139
>PLN00414 glycosyltransferase family protein
Probab=97.14 E-value=0.69 Score=53.54 Aligned_cols=87 Identities=8% Similarity=0.032 Sum_probs=54.9
Q ss_pred ccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcC----ccccccccc-cCceEEEECC-----CCHHHH
Q 003726 641 RVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATC----HGGPAEIIE-HGVSGFHIDP-----YHPDQV 710 (800)
Q Consensus 641 ~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~----~GG~~EiI~-dg~~G~lv~p-----~d~e~l 710 (800)
+++..++.+. . +.++||.= +=-++++||+++|+|+|+-. ..-.+..+. .-+.|..+.. -+.+++
T Consensus 319 w~PQ~~vL~h-~-~v~~fvtH----~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~i 392 (446)
T PLN00414 319 WVEQPLILSH-P-SVGCFVNH----CGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQREDSGWFSKESL 392 (446)
T ss_pred cCCHHHHhcC-C-ccceEEec----CchhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEeccccCCccCHHHH
Confidence 5666777752 1 13556652 22368999999999999973 334455553 4568877742 367888
Q ss_pred HHHHHHHHHHhcCCH-HHHHHHHHHHHH
Q 003726 711 AELMIEFFEKCYNDP-SHWNKISDGGLK 737 (800)
Q Consensus 711 A~aI~~~l~~l~~dp-~~~~~ms~~a~~ 737 (800)
++++.+++ .++ +..+++.+++++
T Consensus 393 ~~~v~~~m----~~~~e~g~~~r~~a~~ 416 (446)
T PLN00414 393 RDTVKSVM----DKDSEIGNLVKRNHKK 416 (446)
T ss_pred HHHHHHHh----cCChhhHHHHHHHHHH
Confidence 88887766 543 344555555543
No 140
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=97.13 E-value=0.035 Score=65.49 Aligned_cols=196 Identities=14% Similarity=0.131 Sum_probs=107.0
Q ss_pred CCCceEEEE-CCCCchHHHHHHHhcCCC--eEEEEec-CCccccCCCChhhHHhhhhhhccchhhhHHHHHhccCCEEEe
Q 003726 394 QGVPDLIIG-NYSDGNLVATLLSYKLGV--TQCNIAH-ALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNNADFIIT 469 (800)
Q Consensus 394 ~~~PDIIh~-h~~~~~lva~lla~~~gi--p~v~t~H-~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt 469 (800)
..+||++++ -+++.|+-....+++.|+ |+++-+- ..|. |+. .+. +..-+..|.++|
T Consensus 308 ~~kPD~vIlID~PgFNlrLAK~lkk~Gi~ipviyYVsPqVWA---------WR~--~Ri---------kki~k~vD~ll~ 367 (608)
T PRK01021 308 KTNPRTVICIDFPDFHFLLIKKLRKRGYKGKIVHYVCPSIWA---------WRP--KRK---------TILEKYLDLLLL 367 (608)
T ss_pred hcCCCEEEEeCCCCCCHHHHHHHHhcCCCCCEEEEECcccee---------eCc--chH---------HHHHHHhhhhee
Confidence 459999996 556668866666777785 8654322 1221 211 111 123456788888
Q ss_pred cCHHHHhhcccCccccccccccccccceeeeccCCCCCCceEEecCC-CCCCCCCCCChHHHHHHHhhccccccccCCcc
Q 003726 470 STYQEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFDPKFNIVSPG-ADMCIYFPYSDKEKRLIALHGQIEDLLYDPKQ 548 (800)
Q Consensus 470 ~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~~k~~VIpnG-vD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~ 548 (800)
.=+-|.+- |+. +|++ +..|.+. +|.-...+....
T Consensus 368 IfPFE~~~-------y~~-------------~gv~-----v~yVGHPL~d~i~~~~~~~~-------------------- 402 (608)
T PRK01021 368 ILPFEQNL-------FKD-------------SPLR-----TVYLGHPLVETISSFSPNLS-------------------- 402 (608)
T ss_pred cCccCHHH-------HHh-------------cCCC-----eEEECCcHHhhcccCCCHHH--------------------
Confidence 87655441 111 2332 4555333 344222222111
Q ss_pred ccccccccCCCCCcEE-EEEec-CCC-CCCHHHHHHHHH--HhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHH
Q 003726 549 NDEHVGILNDRSKPLI-FSMAR-LDG-VKNLTGLVECYG--KSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLI 623 (800)
Q Consensus 549 ~~~~~Gll~~~~k~iI-l~vGR-L~~-~Kgl~~LleA~~--~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li 623 (800)
.++++|+ ++++++| +..|. -.+ .+.++.+++++. ++. ++.++++...... ..+.+.+..
T Consensus 403 ~r~~lgl--~~~~~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~---~~l~fvvp~a~~~-----------~~~~i~~~~ 466 (608)
T PRK01021 403 WKEQLHL--PSDKPIVAAFPGSRRGDILRNLTIQVQAFLASSLA---STHQLLVSSANPK-----------YDHLILEVL 466 (608)
T ss_pred HHHHcCC--CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHhc---cCeEEEEecCchh-----------hHHHHHHHH
Confidence 1245677 5555554 45553 333 457788888887 443 3577766433211 123444445
Q ss_pred HHcCCCCcEEEcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEc
Q 003726 624 KQYNLHGQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFAT 684 (800)
Q Consensus 624 ~~~gL~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT 684 (800)
+..++ -.+..+. ..+-+..+++ ||+.+.. .|.+.+|++.+|+|.|..
T Consensus 467 ~~~~~-~~~~ii~-------~~~~~~~m~a-aD~aLaa-----SGTaTLEaAL~g~PmVV~ 513 (608)
T PRK01021 467 QQEGC-LHSHIVP-------SQFRYELMRE-CDCALAK-----CGTIVLETALNQTPTIVT 513 (608)
T ss_pred hhcCC-CCeEEec-------CcchHHHHHh-cCeeeec-----CCHHHHHHHHhCCCEEEE
Confidence 43321 1233331 1123677775 9988875 799999999999999986
No 141
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=97.12 E-value=0.014 Score=64.85 Aligned_cols=199 Identities=19% Similarity=0.183 Sum_probs=114.4
Q ss_pred CCCceEEEECC-CCchHHHHHHHhcCC--CeEEEEec-CCccccCCCChhhHHhhhhhhccchhhhHHHHHhccCCEEEe
Q 003726 394 QGVPDLIIGNY-SDGNLVATLLSYKLG--VTQCNIAH-ALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNNADFIIT 469 (800)
Q Consensus 394 ~~~PDIIh~h~-~~~~lva~lla~~~g--ip~v~t~H-~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt 469 (800)
..+||++++-+ ++.|+-.....++.| +|+++.+- +.|. |+.- + -....+.+|++.+
T Consensus 83 ~~kpD~~i~IDsPdFnl~vak~lrk~~p~i~iihYV~PsVWA---------Wr~~--R---------a~~i~~~~D~lLa 142 (381)
T COG0763 83 ANKPDVLILIDSPDFNLRVAKKLRKAGPKIKIIHYVSPSVWA---------WRPK--R---------AVKIAKYVDHLLA 142 (381)
T ss_pred hcCCCEEEEeCCCCCchHHHHHHHHhCCCCCeEEEECcceee---------echh--h---------HHHHHHHhhHeee
Confidence 56999999655 455665444555556 77654332 1221 2211 1 0225668899999
Q ss_pred cCHHHHhhcccCccccccccccccccceeeeccCCCCCCceEEec-CCCCCCCCCCCChHHHHHHHhhccccccccCCcc
Q 003726 470 STYQEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFDPKFNIVS-PGADMCIYFPYSDKEKRLIALHGQIEDLLYDPKQ 548 (800)
Q Consensus 470 ~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~~k~~VIp-nGvD~~~f~p~~~~~~rl~~~~~~~~~~l~~~~~ 548 (800)
.=+-|.+. |.. .|++ ...|. |=+|.-.+.+....
T Consensus 143 ilPFE~~~-------y~k-------------~g~~-----~~yVGHpl~d~i~~~~~r~~-------------------- 177 (381)
T COG0763 143 ILPFEPAF-------YDK-------------FGLP-----CTYVGHPLADEIPLLPDREA-------------------- 177 (381)
T ss_pred ecCCCHHH-------HHh-------------cCCC-----eEEeCChhhhhccccccHHH--------------------
Confidence 87755441 111 1221 34443 33444334443322
Q ss_pred ccccccccCCCCCcE-EEEEec-CCC-CCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHH
Q 003726 549 NDEHVGILNDRSKPL-IFSMAR-LDG-VKNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQ 625 (800)
Q Consensus 549 ~~~~~Gll~~~~k~i-Il~vGR-L~~-~Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~ 625 (800)
.++.+|+ +.++++ .+..|+ -++ .+....+++++.++..+.|+.++++--.... .+.+.....+
T Consensus 178 ar~~l~~--~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~~vlp~~~~~------------~~~~~~~~~~ 243 (381)
T COG0763 178 AREKLGI--DADEKTLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLKFVLPLVNAK------------YRRIIEEALK 243 (381)
T ss_pred HHHHhCC--CCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCceEEEecCcHH------------HHHHHHHHhh
Confidence 2366777 555444 445553 222 4567888999999998999999998776644 2222222222
Q ss_pred c-CCCCcEEEcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcC
Q 003726 626 Y-NLHGQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATC 685 (800)
Q Consensus 626 ~-gL~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~ 685 (800)
. ...-.+... .++-+..+++ ||+.+. ..|.+.+|+|.+|+|.|.+.
T Consensus 244 ~~~~~~~~~~~--------~~~~~~a~~~-aD~al~-----aSGT~tLE~aL~g~P~Vv~Y 290 (381)
T COG0763 244 WEVAGLSLILI--------DGEKRKAFAA-ADAALA-----ASGTATLEAALAGTPMVVAY 290 (381)
T ss_pred ccccCceEEec--------CchHHHHHHH-hhHHHH-----hccHHHHHHHHhCCCEEEEE
Confidence 2 211223333 2466777775 887665 47999999999999999873
No 142
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=97.01 E-value=0.17 Score=55.05 Aligned_cols=170 Identities=11% Similarity=0.073 Sum_probs=115.9
Q ss_pred CCcEEEEEecC-CCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEcccc
Q 003726 560 SKPLIFSMARL-DGVKNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISAQ 638 (800)
Q Consensus 560 ~k~iIl~vGRL-~~~Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~~ 638 (800)
+.++.+-+|+= ++..+...+++++.+.. ..++++++.=+-+. ...+|++++.+..+++--.++++.+-
T Consensus 144 ~~~~tIlvGNSgd~SN~Hie~L~~l~~~~--~~~v~ii~PlsYp~-------gn~~Yi~~V~~~~~~lF~~~~~~~L~-- 212 (322)
T PRK02797 144 AGKMTILVGNSGDRSNRHIEALRALHQQF--GDNVKIIVPMGYPA-------NNQAYIEEVRQAGLALFGAENFQILT-- 212 (322)
T ss_pred CCceEEEEeCCCCCcccHHHHHHHHHHHh--CCCeEEEEECCcCC-------CCHHHHHHHHHHHHHhcCcccEEehh--
Confidence 34566677774 56777888888887654 36788888777653 23567888888888876557899887
Q ss_pred cCccChHHHHHHHHccCcEEEec-CCCCCCcHHHHHHHHcCCcEEEc-CccccccccccCceEEEECCCCHHHHHHHHHH
Q 003726 639 MNRVRNGELYRYIADTRGVFVQP-AFYEAFGLTVVEAMTCGLPTFAT-CHGGPAEIIEHGVSGFHIDPYHPDQVAELMIE 716 (800)
Q Consensus 639 ~~~v~~~el~~~ia~aadvfV~P-S~~E~fGl~vlEAMA~GlPVIAT-~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~ 716 (800)
+.++.+|...+++. +|+.++- .+.++.|+ ++=.+..|+||+.+ +..-..++.+.|. -++++.++. -..+.+
T Consensus 213 -e~l~f~eYl~lL~~-~Dl~~f~~~RQQgiGn-l~lLi~~G~~v~l~r~n~fwqdl~e~gv-~Vlf~~d~L---~~~~v~ 285 (322)
T PRK02797 213 -EKLPFDDYLALLRQ-CDLGYFIFARQQGIGT-LCLLIQLGKPVVLSRDNPFWQDLTEQGL-PVLFTGDDL---DEDIVR 285 (322)
T ss_pred -hhCCHHHHHHHHHh-CCEEEEeechhhHHhH-HHHHHHCCCcEEEecCCchHHHHHhCCC-eEEecCCcc---cHHHHH
Confidence 57888999999996 9998876 45789998 55579999999998 4555566655543 333443322 112211
Q ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Q 003726 717 FFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLTLAGV 758 (800)
Q Consensus 717 ~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~ 758 (800)
+..++|...-++.+. |+-+.+.+.+.+++..
T Consensus 286 ---------e~~rql~~~dk~~I~--Ff~pn~~~~W~~~l~~ 316 (322)
T PRK02797 286 ---------EAQRQLASVDKNIIA--FFSPNYLQGWRNALAI 316 (322)
T ss_pred ---------HHHHHHHhhCcceee--ecCHhHHHHHHHHHHH
Confidence 112334444555553 9999999988888764
No 143
>PLN03007 UDP-glucosyltransferase family protein
Probab=96.98 E-value=0.84 Score=53.40 Aligned_cols=79 Identities=13% Similarity=0.070 Sum_probs=46.4
Q ss_pred CcEEEcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcCc----ccccccccc-CceEEEEC-
Q 003726 630 GQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATCH----GGPAEIIEH-GVSGFHID- 703 (800)
Q Consensus 630 ~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~~----GG~~EiI~d-g~~G~lv~- 703 (800)
.++...+ +++..++...= +.++||.= +=-++++||+.+|+|+|+-.. .-.+..+.+ -..|+-+.
T Consensus 345 ~g~~v~~----w~PQ~~iL~h~--~v~~fvtH----~G~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~ 414 (482)
T PLN03007 345 KGLIIRG----WAPQVLILDHQ--ATGGFVTH----CGWNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGA 414 (482)
T ss_pred CCEEEec----CCCHHHHhccC--ccceeeec----CcchHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEecc
Confidence 5677776 56666666521 12346542 223589999999999999743 333333321 13344331
Q ss_pred ---------CCCHHHHHHHHHHHH
Q 003726 704 ---------PYHPDQVAELMIEFF 718 (800)
Q Consensus 704 ---------p~d~e~lA~aI~~~l 718 (800)
.-+.+++++++.+++
T Consensus 415 ~~~~~~~~~~~~~~~l~~av~~~m 438 (482)
T PLN03007 415 KKLVKVKGDFISREKVEKAVREVI 438 (482)
T ss_pred ccccccccCcccHHHHHHHHHHHh
Confidence 136778888887766
No 144
>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....
Probab=96.98 E-value=0.034 Score=66.66 Aligned_cols=142 Identities=15% Similarity=0.118 Sum_probs=93.9
Q ss_pred ccccCCCCCcEEEEEecCCCCCCHHHH----HHHHHHhhcc----CCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHH
Q 003726 553 VGILNDRSKPLIFSMARLDGVKNLTGL----VECYGKSSKL----RELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIK 624 (800)
Q Consensus 553 ~Gll~~~~k~iIl~vGRL~~~Kgl~~L----leA~~~l~~~----~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~ 624 (800)
.|+.-+++...++++-|+...|...+. ++-+.++++. ...+.+++.|.... .|...++.++.+.++++
T Consensus 436 ~~~~ldp~slfdv~~rR~heYKRq~LniL~ii~~y~rik~~p~~~~~Pv~~IFaGKAhP----~d~~gK~iIk~I~~va~ 511 (713)
T PF00343_consen 436 TGVELDPDSLFDVQARRFHEYKRQLLNILHIIDRYNRIKNNPNKKIRPVQFIFAGKAHP----GDYMGKEIIKLINNVAE 511 (713)
T ss_dssp HSS---TTSEEEEEES-SCCCCTHHHHHHHHHHHHHHHHHSTTSCCS-EEEEEE----T----T-HHHHHHHHHHHHHHH
T ss_pred hCCCCCcchhhhhhhhhcccccccCcccccHHHHHHHHHhcccCCCCCeEEEEeccCCC----CcHHHHHHHHHHHHHHH
Confidence 455447788888999999999998883 4555565543 12366777776544 45556666777776665
Q ss_pred H----cCCCC--cEEEcccccCccChHHHHHHHHccCcEEEecCC--CCCCcHHHHHHHHcCCcEEEcCcccccccccc-
Q 003726 625 Q----YNLHG--QFRWISAQMNRVRNGELYRYIADTRGVFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH- 695 (800)
Q Consensus 625 ~----~gL~~--~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~--~E~fGl~vlEAMA~GlPVIAT~~GG~~EiI~d- 695 (800)
. ..+.+ +|.|+. -.+=.+.+.+-.++||-.+.|+ .|++|.+-+-||.-|.+.++|-.|...|+.+.
T Consensus 512 ~in~Dp~v~~~lkVvFle-----nYdvslA~~lipg~DVwln~p~~p~EASGTSgMK~~~NGaL~lstlDG~niEi~e~v 586 (713)
T PF00343_consen 512 VINNDPEVGDRLKVVFLE-----NYDVSLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAMNGALNLSTLDGWNIEIAEAV 586 (713)
T ss_dssp HHCT-TTTCCGEEEEEET-----T-SHHHHHHHGGG-SEEEE---TTSSSS-SHHHHHHHTT-EEEEESSTCHHHHHHHH
T ss_pred HHhcChhhccceeEEeec-----CCcHHHHHHHhhhhhhhhhCCCCCccccCCCcchhhcCCCeEEecccchhHHHHHhc
Confidence 3 33445 788985 3445777888778999999887 79999999999999999999999999999864
Q ss_pred -CceEEEEC
Q 003726 696 -GVSGFHID 703 (800)
Q Consensus 696 -g~~G~lv~ 703 (800)
..+.|++-
T Consensus 587 G~eN~fiFG 595 (713)
T PF00343_consen 587 GEENIFIFG 595 (713)
T ss_dssp -GGGSEEES
T ss_pred CCCcEEEcC
Confidence 35778884
No 145
>PLN02173 UDP-glucosyl transferase family protein
Probab=96.89 E-value=1.3 Score=51.25 Aligned_cols=79 Identities=13% Similarity=0.119 Sum_probs=52.1
Q ss_pred CcEEEcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEc----CccccccccccC-ceEEEECC
Q 003726 630 GQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEHG-VSGFHIDP 704 (800)
Q Consensus 630 ~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT----~~GG~~EiI~dg-~~G~lv~p 704 (800)
+++.+.+ +++..++...= +.++||.= +=.++++||+++|+|+|+- +..-....+++. +.|.-+..
T Consensus 317 ~~~~i~~----W~PQ~~iL~H~--~v~~FvtH----cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~ 386 (449)
T PLN02173 317 DKSLVLK----WSPQLQVLSNK--AIGCFMTH----CGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKA 386 (449)
T ss_pred CceEEeC----CCCHHHHhCCC--ccceEEec----CccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEee
Confidence 5677777 66667766531 12355542 2336899999999999997 344455566653 57776642
Q ss_pred C------CHHHHHHHHHHHH
Q 003726 705 Y------HPDQVAELMIEFF 718 (800)
Q Consensus 705 ~------d~e~lA~aI~~~l 718 (800)
. +.+++++++.+++
T Consensus 387 ~~~~~~~~~e~v~~av~~vm 406 (449)
T PLN02173 387 EKESGIAKREEIEFSIKEVM 406 (449)
T ss_pred cccCCcccHHHHHHHHHHHh
Confidence 1 5788888887776
No 146
>PLN02210 UDP-glucosyl transferase
Probab=96.82 E-value=1.5 Score=50.90 Aligned_cols=133 Identities=13% Similarity=0.119 Sum_probs=72.5
Q ss_pred CCcEEEEEecCCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEccccc
Q 003726 560 SKPLIFSMARLDGVKNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISAQM 639 (800)
Q Consensus 560 ~k~iIl~vGRL~~~Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~~~ 639 (800)
...+.++.|.+... .-+.+-+.+..+... ..+|+++-.... ...+ .+.+.+... .++....+
T Consensus 269 ~svvyvsfGS~~~~-~~~~~~e~a~~l~~~--~~~flw~~~~~~--~~~~------~~~~~~~~~----~~~g~v~~--- 330 (456)
T PLN02210 269 SSVVYISFGSMLES-LENQVETIAKALKNR--GVPFLWVIRPKE--KAQN------VQVLQEMVK----EGQGVVLE--- 330 (456)
T ss_pred CceEEEEecccccC-CHHHHHHHHHHHHhC--CCCEEEEEeCCc--cccc------hhhHHhhcc----CCCeEEEe---
Confidence 34677788887542 334444444444433 346555433211 0001 112222221 13333444
Q ss_pred CccChHHHHHHHHccCcEEEecCCCCCCc-HHHHHHHHcCCcEEEcC----cccccccccc-CceEEEECC------CCH
Q 003726 640 NRVRNGELYRYIADTRGVFVQPAFYEAFG-LTVVEAMTCGLPTFATC----HGGPAEIIEH-GVSGFHIDP------YHP 707 (800)
Q Consensus 640 ~~v~~~el~~~ia~aadvfV~PS~~E~fG-l~vlEAMA~GlPVIAT~----~GG~~EiI~d-g~~G~lv~p------~d~ 707 (800)
+++..++...- +.++||.= +| ++++||+.+|+|+|+-. ..-.+..+.+ -+.|..++. -+.
T Consensus 331 -w~PQ~~iL~h~--~vg~FitH-----~G~nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~~ 402 (456)
T PLN02210 331 -WSPQEKILSHM--AISCFVTH-----CGWNSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVDGELKV 402 (456)
T ss_pred -cCCHHHHhcCc--CcCeEEee-----CCcccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccccCCcCCH
Confidence 56667766531 12366642 33 47999999999999963 3334555555 468877742 367
Q ss_pred HHHHHHHHHHH
Q 003726 708 DQVAELMIEFF 718 (800)
Q Consensus 708 e~lA~aI~~~l 718 (800)
+++++++.+++
T Consensus 403 ~~l~~av~~~m 413 (456)
T PLN02210 403 EEVERCIEAVT 413 (456)
T ss_pred HHHHHHHHHHh
Confidence 88888887766
No 147
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=96.80 E-value=0.16 Score=55.81 Aligned_cols=134 Identities=16% Similarity=0.231 Sum_probs=77.6
Q ss_pred CCCcEEEEEecCCCCCCHHHH---HHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEc
Q 003726 559 RSKPLIFSMARLDGVKNLTGL---VECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWI 635 (800)
Q Consensus 559 ~~k~iIl~vGRL~~~Kgl~~L---leA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~fl 635 (800)
....+++++|.= .-|-+++ ++|+..+....+ .-++|.|.... .+...++...-.-.++|..+
T Consensus 218 E~~~Ilvs~GGG--~dG~eLi~~~l~A~~~l~~l~~-~~~ivtGP~MP------------~~~r~~l~~~A~~~p~i~I~ 282 (400)
T COG4671 218 EGFDILVSVGGG--ADGAELIETALAAAQLLAGLNH-KWLIVTGPFMP------------EAQRQKLLASAPKRPHISIF 282 (400)
T ss_pred ccceEEEecCCC--hhhHHHHHHHHHHhhhCCCCCc-ceEEEeCCCCC------------HHHHHHHHHhcccCCCeEEE
Confidence 445678888853 3343333 333333333322 34677777766 33444444444334678877
Q ss_pred ccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcCcccccc--cccc------CceEEEE-CCCC
Q 003726 636 SAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAE--IIEH------GVSGFHI-DPYH 706 (800)
Q Consensus 636 G~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~~GG~~E--iI~d------g~~G~lv-~p~d 706 (800)
-+. .++..+++. |+..|.=+=| +|++|-++.|+|.+.-..+-+.| .|.. |-...+- +.-+
T Consensus 283 ~f~------~~~~~ll~g-A~~vVSm~GY----NTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~dvL~pe~lt 351 (400)
T COG4671 283 EFR------NDFESLLAG-ARLVVSMGGY----NTVCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLVDVLLPENLT 351 (400)
T ss_pred Ehh------hhHHHHHHh-hheeeecccc----hhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcceeeCcccCC
Confidence 643 478888886 8887764322 78999999999999875554444 2211 2222322 2225
Q ss_pred HHHHHHHHHHHH
Q 003726 707 PDQVAELMIEFF 718 (800)
Q Consensus 707 ~e~lA~aI~~~l 718 (800)
++.+|++|...+
T Consensus 352 ~~~La~al~~~l 363 (400)
T COG4671 352 PQNLADALKAAL 363 (400)
T ss_pred hHHHHHHHHhcc
Confidence 677777775554
No 148
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=96.77 E-value=1.7 Score=50.75 Aligned_cols=79 Identities=14% Similarity=0.109 Sum_probs=50.4
Q ss_pred CcEEEcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEc----Ccccccccccc-CceEEEECC
Q 003726 630 GQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEH-GVSGFHIDP 704 (800)
Q Consensus 630 ~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT----~~GG~~EiI~d-g~~G~lv~p 704 (800)
.++++.+ +++..++... .+.++||.= +=-++++||+++|+|+|+- |..-....+.+ -+.|.-+..
T Consensus 343 ~g~~v~~----w~PQ~~vL~h--~~v~~fvtH----~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~ 412 (477)
T PLN02863 343 RGLVIRG----WAPQVAILSH--RAVGAFLTH----CGWNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCE 412 (477)
T ss_pred CCEEecC----CCCHHHHhcC--CCcCeEEec----CCchHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEecc
Confidence 4577766 5666666652 125566652 2235899999999999996 33444454443 367876632
Q ss_pred -----CCHHHHHHHHHHHH
Q 003726 705 -----YHPDQVAELMIEFF 718 (800)
Q Consensus 705 -----~d~e~lA~aI~~~l 718 (800)
-+.+++++++.+++
T Consensus 413 ~~~~~~~~~~v~~~v~~~m 431 (477)
T PLN02863 413 GADTVPDSDELARVFMESV 431 (477)
T ss_pred CCCCCcCHHHHHHHHHHHh
Confidence 25678888887765
No 149
>PLN02562 UDP-glycosyltransferase
Probab=96.74 E-value=1.7 Score=50.33 Aligned_cols=87 Identities=15% Similarity=0.116 Sum_probs=58.5
Q ss_pred CcEEEcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEc----CccccccccccC-ceEEEECC
Q 003726 630 GQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEHG-VSGFHIDP 704 (800)
Q Consensus 630 ~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT----~~GG~~EiI~dg-~~G~lv~p 704 (800)
+++...+ +++..++... . +.++||.= +=-++++||+.+|+|+|+- |....+..+.+. +.|+-+..
T Consensus 328 ~~~~v~~----w~PQ~~iL~h-~-~v~~fvtH----~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~ 397 (448)
T PLN02562 328 KQGKVVS----WAPQLEVLKH-Q-AVGCYLTH----CGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRISG 397 (448)
T ss_pred cCEEEEe----cCCHHHHhCC-C-ccceEEec----CcchhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeCC
Confidence 5677666 6677777763 1 13345541 2235799999999999987 444455666543 67777766
Q ss_pred CCHHHHHHHHHHHHHHhcCCHHHHHH
Q 003726 705 YHPDQVAELMIEFFEKCYNDPSHWNK 730 (800)
Q Consensus 705 ~d~e~lA~aI~~~l~~l~~dp~~~~~ 730 (800)
-+.++++++|.+++ .|++++++
T Consensus 398 ~~~~~l~~~v~~~l----~~~~~r~~ 419 (448)
T PLN02562 398 FGQKEVEEGLRKVM----EDSGMGER 419 (448)
T ss_pred CCHHHHHHHHHHHh----CCHHHHHH
Confidence 68889999997776 67665443
No 150
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=96.30 E-value=3.2 Score=48.22 Aligned_cols=79 Identities=14% Similarity=0.116 Sum_probs=51.9
Q ss_pred CcEEEcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEc----CccccccccccC-ceEEEE-C
Q 003726 630 GQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEHG-VSGFHI-D 703 (800)
Q Consensus 630 ~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT----~~GG~~EiI~dg-~~G~lv-~ 703 (800)
++....+ +++..++...= +.++||.= +=-++++||+++|+|+|+- |....+..+++. +.|.-+ .
T Consensus 324 ~~g~v~~----w~PQ~~iL~h~--~v~~fvtH----~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~ 393 (451)
T PLN02410 324 GRGYIVK----WAPQKEVLSHP--AVGGFWSH----CGWNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVEG 393 (451)
T ss_pred CCeEEEc----cCCHHHHhCCC--ccCeeeec----CchhHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeCC
Confidence 5555555 67777777631 14456652 2225799999999999997 444455555544 678766 3
Q ss_pred CCCHHHHHHHHHHHH
Q 003726 704 PYHPDQVAELMIEFF 718 (800)
Q Consensus 704 p~d~e~lA~aI~~~l 718 (800)
.-+.+++++++.+++
T Consensus 394 ~~~~~~v~~av~~lm 408 (451)
T PLN02410 394 DLDRGAVERAVKRLM 408 (451)
T ss_pred cccHHHHHHHHHHHH
Confidence 346788888887766
No 151
>PLN02554 UDP-glycosyltransferase family protein
Probab=96.26 E-value=3.5 Score=48.31 Aligned_cols=79 Identities=15% Similarity=0.072 Sum_probs=48.6
Q ss_pred CcEEEcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcC----ccccc-cccccCceEEEECC
Q 003726 630 GQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATC----HGGPA-EIIEHGVSGFHIDP 704 (800)
Q Consensus 630 ~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~----~GG~~-EiI~dg~~G~lv~p 704 (800)
+++.+.+ +++..++... . +.++||.= +=-++++||+.+|+|+|+-. ....+ .+++.-+.|..++.
T Consensus 342 ~~g~v~~----W~PQ~~iL~H-~-~v~~FvtH----~G~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~ 411 (481)
T PLN02554 342 DIGKVIG----WAPQVAVLAK-P-AIGGFVTH----CGWNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRK 411 (481)
T ss_pred cCceEEe----eCCHHHHhCC-c-ccCccccc----CccchHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeec
Confidence 4555555 5666676642 1 24445541 22357999999999999973 33344 34555566776641
Q ss_pred -------------CCHHHHHHHHHHHH
Q 003726 705 -------------YHPDQVAELMIEFF 718 (800)
Q Consensus 705 -------------~d~e~lA~aI~~~l 718 (800)
-+.++++++|.+++
T Consensus 412 ~~~~~~~~~~~~~~~~e~l~~av~~vm 438 (481)
T PLN02554 412 YWRGDLLAGEMETVTAEEIERGIRCLM 438 (481)
T ss_pred cccccccccccCeEcHHHHHHHHHHHh
Confidence 26777888887665
No 152
>PLN02670 transferase, transferring glycosyl groups
Probab=96.24 E-value=3.5 Score=48.15 Aligned_cols=105 Identities=17% Similarity=0.152 Sum_probs=64.1
Q ss_pred ccChHHHHHHHHccCcEEEecCCCCCCc-HHHHHHHHcCCcEEEc----CccccccccccCceEEEECC------CCHHH
Q 003726 641 RVRNGELYRYIADTRGVFVQPAFYEAFG-LTVVEAMTCGLPTFAT----CHGGPAEIIEHGVSGFHIDP------YHPDQ 709 (800)
Q Consensus 641 ~v~~~el~~~ia~aadvfV~PS~~E~fG-l~vlEAMA~GlPVIAT----~~GG~~EiI~dg~~G~lv~p------~d~e~ 709 (800)
+++..++...= +.++||. .+| ++++||+++|+|+|+- +.......+++-+.|..++. -+.++
T Consensus 346 W~PQ~~IL~H~--~v~~Fvt-----HcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~l~~~~~~~~~~~e~ 418 (472)
T PLN02670 346 WVPQVKILSHE--SVGGFLT-----HCGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLEVPRDERDGSFTSDS 418 (472)
T ss_pred cCCHHHHhcCc--ccceeee-----cCCcchHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEEeeccccCCcCcHHH
Confidence 56667766531 1334554 233 5899999999999997 44445556666778888853 25778
Q ss_pred HHHHHHHHHHHhcCCH---HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Q 003726 710 VAELMIEFFEKCYNDP---SHWNKISDGGLKRIYERYTWKIYSERLLTLAG 757 (800)
Q Consensus 710 lA~aI~~~l~~l~~dp---~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~ 757 (800)
++++|.+++ .++ +++++ .+.-++.+.++=+-..+++.+.+...
T Consensus 419 i~~av~~vm----~~~~g~~~r~~-a~~l~~~~~~~~~~~~~~~~~~~~l~ 464 (472)
T PLN02670 419 VAESVRLAM----VDDAGEEIRDK-AKEMRNLFGDMDRNNRYVDELVHYLR 464 (472)
T ss_pred HHHHHHHHh----cCcchHHHHHH-HHHHHHHHhCcchhHHHHHHHHHHHH
Confidence 888887766 554 23222 23333344455556666666665543
No 153
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=96.15 E-value=3.9 Score=47.84 Aligned_cols=78 Identities=17% Similarity=0.145 Sum_probs=50.7
Q ss_pred cEEEcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcC----cccccccc-ccCceEEEECC-
Q 003726 631 QFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATC----HGGPAEII-EHGVSGFHIDP- 704 (800)
Q Consensus 631 ~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~----~GG~~EiI-~dg~~G~lv~p- 704 (800)
++.+.+ +++..++...-+ .+.||.= +=-++++||+.+|+|+|+-. .......+ +.-+.|..++.
T Consensus 339 g~vv~~----W~PQ~~iL~h~~--vg~FitH----~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~ 408 (481)
T PLN02992 339 GFVVPS----WAPQAEILAHQA--VGGFLTH----CGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDDP 408 (481)
T ss_pred CEEEee----cCCHHHHhCCcc--cCeeEec----CchhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecCC
Confidence 466666 566677766311 2335541 23358999999999999973 34445555 35567877753
Q ss_pred ---CCHHHHHHHHHHHH
Q 003726 705 ---YHPDQVAELMIEFF 718 (800)
Q Consensus 705 ---~d~e~lA~aI~~~l 718 (800)
-+.++++++|.+++
T Consensus 409 ~~~~~~~~l~~av~~vm 425 (481)
T PLN02992 409 KEVISRSKIEALVRKVM 425 (481)
T ss_pred CCcccHHHHHHHHHHHh
Confidence 36788888887776
No 154
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=96.07 E-value=0.062 Score=60.01 Aligned_cols=91 Identities=13% Similarity=0.087 Sum_probs=56.7
Q ss_pred cEEEEEecCC-C-CCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEccccc
Q 003726 562 PLIFSMARLD-G-VKNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISAQM 639 (800)
Q Consensus 562 ~iIl~vGRL~-~-~Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~~~ 639 (800)
.+.++-|+=. + .+.+..+++++.++.+.. ..+++.|.... +.+.+...+. ..+.+.+
T Consensus 169 ~I~llPGSR~~Ei~~llP~~~~aa~~L~~~~--~~~~i~~a~~~-------------~~i~~~~~~~---~~~~~~~--- 227 (347)
T PRK14089 169 TIAFMPGSRKSEIKRLMPIFKELAKKLEGKE--KILVVPSFFKG-------------KDLKEIYGDI---SEFEISY--- 227 (347)
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHHHhhcC--cEEEEeCCCcH-------------HHHHHHHhcC---CCcEEec---
Confidence 3445555432 1 356677889998887643 66777655421 2333333322 2344443
Q ss_pred CccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcC
Q 003726 640 NRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATC 685 (800)
Q Consensus 640 ~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~ 685 (800)
+.+.++++ ||+.+.. .|.+.+|++.+|+|.|..-
T Consensus 228 ------~~~~~m~~-aDlal~~-----SGT~TLE~al~g~P~Vv~Y 261 (347)
T PRK14089 228 ------DTHKALLE-AEFAFIC-----SGTATLEAALIGTPFVLAY 261 (347)
T ss_pred ------cHHHHHHh-hhHHHhc-----CcHHHHHHHHhCCCEEEEE
Confidence 34667775 8887774 6888889999999999863
No 155
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=95.98 E-value=0.56 Score=51.80 Aligned_cols=140 Identities=13% Similarity=0.059 Sum_probs=96.2
Q ss_pred CCcEEEEEecC-CCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEcccc
Q 003726 560 SKPLIFSMARL-DGVKNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISAQ 638 (800)
Q Consensus 560 ~k~iIl~vGRL-~~~Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~~ 638 (800)
++++-+.+|+= ++..+.-.+++++.+.. ..++++++-=+-+. ...+|++++.+.++++--.+++..+-
T Consensus 183 ~~~ltILvGNSgd~sNnHieaL~~L~~~~--~~~~kIivPLsYg~-------~n~~Yi~~V~~~~~~lF~~~~~~iL~-- 251 (360)
T PF07429_consen 183 KGKLTILVGNSGDPSNNHIEALEALKQQF--GDDVKIIVPLSYGA-------NNQAYIQQVIQAGKELFGAENFQILT-- 251 (360)
T ss_pred CCceEEEEcCCCCCCccHHHHHHHHHHhc--CCCeEEEEECCCCC-------chHHHHHHHHHHHHHhcCccceeEhh--
Confidence 34555667764 56777877787777633 35688777655443 13467888888888875557888875
Q ss_pred cCccChHHHHHHHHccCcEEEecCC-CCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEE--CCCCHHHHHHH
Q 003726 639 MNRVRNGELYRYIADTRGVFVQPAF-YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHI--DPYHPDQVAEL 713 (800)
Q Consensus 639 ~~~v~~~el~~~ia~aadvfV~PS~-~E~fGl~vlEAMA~GlPVIAT~~GG~~EiI~dg~~G~lv--~p~d~e~lA~a 713 (800)
+.++.+|..++++. +|+.++... ..+.|+ ++=.+.+|+||+-+.....-....+..--+++ |.-|.+.++++
T Consensus 252 -e~mpf~eYl~lL~~-cDl~if~~~RQQgiGn-I~lLl~~G~~v~L~~~np~~~~l~~~~ipVlf~~d~L~~~~v~ea 326 (360)
T PF07429_consen 252 -EFMPFDEYLALLSR-CDLGIFNHNRQQGIGN-ICLLLQLGKKVFLSRDNPFWQDLKEQGIPVLFYGDELDEALVREA 326 (360)
T ss_pred -hhCCHHHHHHHHHh-CCEEEEeechhhhHhH-HHHHHHcCCeEEEecCChHHHHHHhCCCeEEeccccCCHHHHHHH
Confidence 47888999999997 999999864 788998 66689999999999665555544443223333 33344444444
No 156
>PF11440 AGT: DNA alpha-glucosyltransferase; InterPro: IPR016223 The T4 bacteriophage of E.coli protects its DNA via two glycosyltransferases which glucosylate 5-hydroxymethyl cytosines (5-HMC) using UDP-glucose. These two proteins are the retaining alpha-glucosyltransferase (AGT) and the inverting beta-glucosyltransferase (BGT). The proteins in this family are AGT. AGT adopts the GT-B fold and binds both the sugar donor and acceptor to the C-terminal domain. There is evidence for a role of AGT in the base-flipping mechanism and for its specific recognition of the acceptor base [].; PDB: 1YA6_B 1Y8Z_B 1Y6F_B 1XV5_A 1Y6G_B.
Probab=95.93 E-value=1.6 Score=46.65 Aligned_cols=139 Identities=17% Similarity=0.082 Sum_probs=78.8
Q ss_pred EEEecCCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHH----------HHHHcCC--CCcE
Q 003726 565 FSMARLDGVKNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHG----------LIKQYNL--HGQF 632 (800)
Q Consensus 565 l~vGRL~~~Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~----------li~~~gL--~~~V 632 (800)
.|+||....||+..+++.-++..+. +...-++-|-...+ +...-+.. -+.+..+ .+-+
T Consensus 187 ~yigR~Tt~kG~~~mfD~h~~~lK~-~~~~t~~~GierS~---------A~~~i~d~~~~~~y~~~~~~~~~~~~pN~~~ 256 (355)
T PF11440_consen 187 RYIGRQTTWKGPRRMFDLHEKILKP-AGFKTIMEGIERSP---------AKISIKDHGIPYEYYPKLDCDEPKPAPNSPV 256 (355)
T ss_dssp EEE--SSGGG-HHHHHHHHHHTTTT-TT-EEEEE---SST---------HHHHHHHTT--EEEE-CTGGGG---SSS--E
T ss_pred eeeeeeeeecCcHHHhhhHHHhcCC-cchhHHhhhhhcCC---------ceeeeecCCcccccCccccccCcccCCCCcc
Confidence 7999999999999999998886554 67777777765441 11111100 0111111 1235
Q ss_pred EEcccccCccChHHHHHHHHccCcEEEecCC------CCCCcHHHHHHHHcCC-cEEEcCcccccc-------ccccCce
Q 003726 633 RWISAQMNRVRNGELYRYIADTRGVFVQPAF------YEAFGLTVVEAMTCGL-PTFATCHGGPAE-------IIEHGVS 698 (800)
Q Consensus 633 ~flG~~~~~v~~~el~~~ia~aadvfV~PS~------~E~fGl~vlEAMA~Gl-PVIAT~~GG~~E-------iI~dg~~ 698 (800)
-..| +.-++|....++. +...++-+. .+..-.+-+|..|||+ ||+-+..|.... .+.+.-+
T Consensus 257 ~v~~----~Yi~~E~~~~Mak-s~Fgy~~~k~~~~y~~r~mEYt~iE~~A~GtIPVF~k~~GEN~r~~~D~~~~~~~~~~ 331 (355)
T PF11440_consen 257 PVYG----PYIRSEGLERMAK-SLFGYQLSKLQQKYLQRSMEYTQIELIAVGTIPVFDKSWGENNRFTLDGTRYIDHPYS 331 (355)
T ss_dssp EEES----S--HHHHHHHHHT-EEEEEE-----GGG-SS---HHHHHHHHCTSEEEEEHHHHHHSB-TTTSSBGGSS--S
T ss_pred eecc----hhhhHHHHHHHhh-ccceeecHHHHHHHHHhhhhhheeeeeeeceeeeeeccccccceeeecCceeeccCcc
Confidence 6666 5667899999997 666655443 3557789999999997 677766665443 3333446
Q ss_pred EEEECCCCHHHHHHHHHHHH
Q 003726 699 GFHIDPYHPDQVAELMIEFF 718 (800)
Q Consensus 699 G~lv~p~d~e~lA~aI~~~l 718 (800)
.+.+|..|-++..++|.++.
T Consensus 332 ~I~~De~dle~T~ekl~E~a 351 (355)
T PF11440_consen 332 AIYFDENDLESTVEKLIEVA 351 (355)
T ss_dssp -EEE-TTSHHHHHHHHHHHH
T ss_pred eeEeccchHHHHHHHHHHHh
Confidence 67899999999999997754
No 157
>PLN02555 limonoid glucosyltransferase
Probab=95.89 E-value=5.1 Score=46.94 Aligned_cols=94 Identities=15% Similarity=0.147 Sum_probs=57.6
Q ss_pred CCcEEEcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcC----ccccccccccC-ceEEEEC
Q 003726 629 HGQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATC----HGGPAEIIEHG-VSGFHID 703 (800)
Q Consensus 629 ~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~----~GG~~EiI~dg-~~G~lv~ 703 (800)
.+++...+ +++..++... . +.++||.= +=-++++||+.+|+|+|+-. .......+.+. +.|.-+.
T Consensus 336 ~~~g~v~~----W~PQ~~iL~H-~-~v~~FvtH----~G~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~ 405 (480)
T PLN02555 336 GDKGKIVQ----WCPQEKVLAH-P-SVACFVTH----CGWNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLC 405 (480)
T ss_pred CCceEEEe----cCCHHHHhCC-C-ccCeEEec----CCcchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEcc
Confidence 35666665 5666776643 1 35566652 22358999999999999973 34445555554 6787762
Q ss_pred -----C--CCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 003726 704 -----P--YHPDQVAELMIEFFEKCYNDPSHWNKISDGGLK 737 (800)
Q Consensus 704 -----p--~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~ 737 (800)
. -+.++++++|.+++ .+++ .++|.++|++
T Consensus 406 ~~~~~~~~v~~~~v~~~v~~vm----~~~~-g~~~r~ra~~ 441 (480)
T PLN02555 406 RGEAENKLITREEVAECLLEAT----VGEK-AAELKQNALK 441 (480)
T ss_pred CCccccCcCcHHHHHHHHHHHh----cCch-HHHHHHHHHH
Confidence 1 25678888887766 4432 3444444443
No 158
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=95.88 E-value=0.74 Score=50.73 Aligned_cols=110 Identities=12% Similarity=0.028 Sum_probs=67.0
Q ss_pred CCCcEEEEEecCCCCC--CHH---HHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEE
Q 003726 559 RSKPLIFSMARLDGVK--NLT---GLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFR 633 (800)
Q Consensus 559 ~~k~iIl~vGRL~~~K--gl~---~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~ 633 (800)
+.+.+.+.+|.=+..- +.+ .+++.+..+.+... ..+.|..+-..| .+..+.+.+..+ -.+.+.
T Consensus 145 ~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~vttSRRTp--------~~~~~~L~~~~~---~~~~~~ 212 (311)
T PF06258_consen 145 PRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYG-GSLLVTTSRRTP--------PEAEAALRELLK---DNPGVY 212 (311)
T ss_pred CCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCC-CeEEEEcCCCCc--------HHHHHHHHHhhc---CCCceE
Confidence 4555667888644332 223 56666666655544 788888887662 122334444333 335663
Q ss_pred EcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcCccc
Q 003726 634 WISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG 688 (800)
Q Consensus 634 flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~~GG 688 (800)
+.. ..+ ..=+..+++. ||.++++.- .-.-+.||.++|+||..-...+
T Consensus 213 ~~~-~~~---~nPy~~~La~-ad~i~VT~D---SvSMvsEA~~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 213 IWD-GTG---ENPYLGFLAA-ADAIVVTED---SVSMVSEAAATGKPVYVLPLPG 259 (311)
T ss_pred Eec-CCC---CCcHHHHHHh-CCEEEEcCc---cHHHHHHHHHcCCCEEEecCCC
Confidence 333 122 2336677775 999999844 3333889999999999987766
No 159
>PLN00164 glucosyltransferase; Provisional
Probab=95.61 E-value=4.6 Score=47.27 Aligned_cols=86 Identities=12% Similarity=0.027 Sum_probs=50.4
Q ss_pred ccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEc----Ccccccccc-ccCceEEEECC-------CCHH
Q 003726 641 RVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEII-EHGVSGFHIDP-------YHPD 708 (800)
Q Consensus 641 ~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT----~~GG~~EiI-~dg~~G~lv~p-------~d~e 708 (800)
+++..++...= +.++||.= +=-++++||+++|+|+|+- |..-....+ +.-+.|+-++. -+.+
T Consensus 346 w~PQ~~iL~h~--~vg~fvtH----~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~~~~~~~~e 419 (480)
T PLN00164 346 WAPQKEILAHA--AVGGFVTH----CGWNSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDRKRDNFVEAA 419 (480)
T ss_pred cCCHHHHhcCc--ccCeEEee----cccchHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEeccccccCCcCcHH
Confidence 55666666531 12345541 1125799999999999996 444445444 33467877642 2567
Q ss_pred HHHHHHHHHHHHhcCCHH-HHHHHHHHHH
Q 003726 709 QVAELMIEFFEKCYNDPS-HWNKISDGGL 736 (800)
Q Consensus 709 ~lA~aI~~~l~~l~~dp~-~~~~ms~~a~ 736 (800)
+++++|.+++ .+++ ..+.|.+++.
T Consensus 420 ~l~~av~~vm----~~~~~~~~~~r~~a~ 444 (480)
T PLN00164 420 ELERAVRSLM----GGGEEEGRKAREKAA 444 (480)
T ss_pred HHHHHHHHHh----cCCchhHHHHHHHHH
Confidence 8888887766 5543 2344444443
No 160
>PF08288 PIGA: PIGA (GPI anchor biosynthesis); InterPro: IPR013234 This domain is found on phosphatidylinositol N-acetylglucosaminyltransferase proteins. These proteins are involved in GPI anchor biosynthesis and are associated with the disease paroxysmal nocturnal haemoglobinuria [].; GO: 0006506 GPI anchor biosynthetic process
Probab=95.54 E-value=0.049 Score=48.11 Aligned_cols=72 Identities=17% Similarity=0.098 Sum_probs=49.6
Q ss_pred CCCeEEEEeccCCCCccccccccccCChhhHHHHHHHHHHHHHHHhCCCceEEEECCCCc--hHHHHHHHhcCCCeEEEE
Q 003726 348 TEHTHILRVPFRTENGILRKWISRFDVWPYLETFAEDASNEIAAELQGVPDLIIGNYSDG--NLVATLLSYKLGVTQCNI 425 (800)
Q Consensus 348 ~~~v~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~ll~~~~~~PDIIh~h~~~~--~lva~lla~~~gip~v~t 425 (800)
++|.++..+|+... .+....|.+-....- .+.++- +++.||||+|.+.+ +.-+.+.|+.+|++.|+|
T Consensus 13 tngLKVYYlP~~~~--------~~~~t~Pt~~~~~pl-~R~Ili--rE~I~IVHgH~a~S~l~hE~i~hA~~mGlktVfT 81 (90)
T PF08288_consen 13 TNGLKVYYLPLKVF--------YNQCTLPTLFGSFPL-LRNILI--RERIDIVHGHQAFSTLCHEAILHARTMGLKTVFT 81 (90)
T ss_pred CCCeEEEeecchhh--------hcCcchHHHHHhhHH-HHHHHH--HcCeeEEEeehhhhHHHHHHHHHHHhCCCcEEee
Confidence 34788888888652 234455544333332 333332 33899999999865 456888999999999999
Q ss_pred ecCCc
Q 003726 426 AHALE 430 (800)
Q Consensus 426 ~H~l~ 430 (800)
-|++.
T Consensus 82 DHSLf 86 (90)
T PF08288_consen 82 DHSLF 86 (90)
T ss_pred ccccc
Confidence 99974
No 161
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=94.92 E-value=2 Score=52.48 Aligned_cols=295 Identities=14% Similarity=0.122 Sum_probs=170.3
Q ss_pred HHHHHHHHHHhCCCceEEEECCCCchHHHHHHHhc-CCCeEEEEecCCccccCCCChhhHHhhhhhhccchhhhHHHHHh
Q 003726 383 EDASNEIAAELQGVPDLIIGNYSDGNLVATLLSYK-LGVTQCNIAHALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAM 461 (800)
Q Consensus 383 ~~~~~~ll~~~~~~PDIIh~h~~~~~lva~lla~~-~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~ 461 (800)
......+...++ .-|+|.+|..+..+++..+..+ ..+.+.+..|+- +|.+.++.-. ..+ ..-...+
T Consensus 128 ~~f~d~ive~~~-~~d~vwihdyhlmllp~~lr~~~~~~~ig~flhsp----fpssEi~r~l-------p~r-~eIl~gl 194 (732)
T KOG1050|consen 128 QAFADKIVEVYE-EGDIVWIHDYHLMLLPQMLRERFNSAKIGFFLHSP----FPSSEIYRCL-------PVR-KEILRGL 194 (732)
T ss_pred HHHHHHHHHhcc-CCCcEEEEcchhhccchhhhcccccceEEEeccCC----CChHHHHHhc-------ccH-HHHHHhh
Confidence 444555666656 7889999998877777666655 346665667764 2222222110 000 1113356
Q ss_pred ccCCEEEecCHHHHhhcccC-----ccccccccccccccceeeeccCCCCCCceEEecCCCCCCCCCCCChHHHHHHHhh
Q 003726 462 NNADFIITSTYQEIAGSKNN-----VGQYENHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSDKEKRLIALH 536 (800)
Q Consensus 462 ~~AD~IIt~S~~ei~~~~~~-----~gqy~~~~~f~~p~l~~vv~Gi~v~~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~ 536 (800)
..+|.|-..+++-....-.+ .-.+.+ .+...+ +.|.+ ....+..+|-|+|...|............
T Consensus 195 l~~~~i~f~t~d~arhFls~c~R~l~~~~~s--~~~~~~----v~~rg-r~~~v~~~pigid~~r~v~~~~~~~~~~~-- 265 (732)
T KOG1050|consen 195 LYDDLLGFHTDDYARHFLSTCSRLLGLEVAS--KFPTAG----VSGRG-RDVSVKALPIGIDVQRFVKLLELPYVGSK-- 265 (732)
T ss_pred hccCccccccccHHHHHHHHHHHHHHhhhhc--cCCcce----EEecc-ceeeeeecccccchHHhhccccchhHHHH--
Confidence 66666654444222110000 000000 001111 11211 12356678888888777543221111000
Q ss_pred ccccccccCCccccccccccCCCCCcEEEEEecCCCCCCHHHHHHHHHHhhccC----CCeEEEEEeccCCCCCccchHH
Q 003726 537 GQIEDLLYDPKQNDEHVGILNDRSKPLIFSMARLDGVKNLTGLVECYGKSSKLR----ELVNLVVVGGYMDVKNSRDREE 612 (800)
Q Consensus 537 ~~~~~~l~~~~~~~~~~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~l~~~~----~~v~LvIVG~g~~~~~~~~~e~ 612 (800)
...++-. ..++.+++-+-|++..||+..=+.++.++...+ +.+.++.+..+.........+.
T Consensus 266 -------------~~ei~~~-~~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~~~~~~~~~~v~~~ 331 (732)
T KOG1050|consen 266 -------------GMEIKEP-FKGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIENPKRTDGKEVEEL 331 (732)
T ss_pred -------------HHHHhhh-ccCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEecCCcccchHHHHH
Confidence 0011111 246778899999999999987777777766554 4577887777665322222222
Q ss_pred HHHHHHHHHHHHH-cCCC--CcEEEcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcC----CcEEEcC
Q 003726 613 MAEIEKMHGLIKQ-YNLH--GQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCG----LPTFATC 685 (800)
Q Consensus 613 ~~~~~~l~~li~~-~gL~--~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~G----lPVIAT~ 685 (800)
..........+.+ .+-. ..|+++- ..++..++.++++- +|+....+..+|..++.+|+.+|. .+-|.+.
T Consensus 332 k~~v~~~v~rIn~~f~~~~~~pV~~~~---~~~~~~~l~a~~~V-aev~~v~s~rdGmnl~~~e~i~~~~~~~~~lVlse 407 (732)
T KOG1050|consen 332 KFCVSVHVRRINEKFGSASYQPVHSLL---KDLPFLELLALYKV-AEVCPVTSWRDGMNLVFLEYILCQENKKSVLVLSE 407 (732)
T ss_pred HHHhHhhhhhhhhccCCcccceEEEee---ccCCHHHHhhhHHh-hhheeecccccccchhhhHHHHhhcccCCceEEee
Confidence 2222222222222 2211 2344443 36777889999886 999999999999999999999984 6778888
Q ss_pred ccccccccccCceEEEECCCCHHHHHHHHHHHHH
Q 003726 686 HGGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFE 719 (800)
Q Consensus 686 ~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~ 719 (800)
.-|..+..++ ...+++|-|.++++.+|..++.
T Consensus 408 f~G~~~tl~d--~aivvnpw~~~~~~~~i~~al~ 439 (732)
T KOG1050|consen 408 FIGDDTTLED--AAIVVNPWDGDEFAILISKALT 439 (732)
T ss_pred eccccccccc--cCEEECCcchHHHHHHHHHHhh
Confidence 7788887744 4578999999999999988773
No 162
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=94.89 E-value=0.77 Score=49.26 Aligned_cols=140 Identities=17% Similarity=0.264 Sum_probs=83.0
Q ss_pred CCcEEEEEecCCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEccccc
Q 003726 560 SKPLIFSMARLDGVKNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISAQM 639 (800)
Q Consensus 560 ~k~iIl~vGRL~~~Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~~~ 639 (800)
.+.+++++|.-++ ||++. +.++.+... ++++.||-+...| ....+.+.++++ +++.+.-
T Consensus 158 ~r~ilI~lGGsDp-k~lt~--kvl~~L~~~--~~nl~iV~gs~~p----------~l~~l~k~~~~~---~~i~~~~--- 216 (318)
T COG3980 158 KRDILITLGGSDP-KNLTL--KVLAELEQK--NVNLHIVVGSSNP----------TLKNLRKRAEKY---PNINLYI--- 216 (318)
T ss_pred hheEEEEccCCCh-hhhHH--HHHHHhhcc--CeeEEEEecCCCc----------chhHHHHHHhhC---CCeeeEe---
Confidence 4457888887555 66553 333334332 3677666553221 145666667666 5777763
Q ss_pred CccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEE----cCcccccccccc----CceEEEECCCCHHHHH
Q 003726 640 NRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFA----TCHGGPAEIIEH----GVSGFHIDPYHPDQVA 711 (800)
Q Consensus 640 ~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIA----T~~GG~~EiI~d----g~~G~lv~p~d~e~lA 711 (800)
..+++.++|.. +|+.+.. =|.|+.||...|+|..+ .+.-..+...+. ...|++.. ..+..
T Consensus 217 ---~~~dma~LMke-~d~aI~A-----aGstlyEa~~lgvP~l~l~~a~NQ~~~a~~f~~lg~~~~l~~~l~---~~~~~ 284 (318)
T COG3980 217 ---DTNDMAELMKE-ADLAISA-----AGSTLYEALLLGVPSLVLPLAENQIATAKEFEALGIIKQLGYHLK---DLAKD 284 (318)
T ss_pred ---cchhHHHHHHh-cchheec-----cchHHHHHHHhcCCceEEeeeccHHHHHHHHHhcCchhhccCCCc---hHHHH
Confidence 34679999997 8887764 68999999999999332 232222222221 23455532 34445
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHH
Q 003726 712 ELMIEFFEKCYNDPSHWNKISDGGL 736 (800)
Q Consensus 712 ~aI~~~l~~l~~dp~~~~~ms~~a~ 736 (800)
..+.++ ..|+..+..++....
T Consensus 285 ~~~~~i----~~d~~~rk~l~~~~~ 305 (318)
T COG3980 285 YEILQI----QKDYARRKNLSFGSK 305 (318)
T ss_pred HHHHHh----hhCHHHhhhhhhccc
Confidence 555443 388888777665543
No 163
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=94.18 E-value=0.21 Score=55.89 Aligned_cols=133 Identities=14% Similarity=0.165 Sum_probs=67.0
Q ss_pred ccccccCCCCCcEEEEEecCCCCCCH------HHH--HHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHH
Q 003726 551 EHVGILNDRSKPLIFSMARLDGVKNL------TGL--VECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGL 622 (800)
Q Consensus 551 ~~~Gll~~~~k~iIl~vGRL~~~Kgl------~~L--leA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~l 622 (800)
+.+|+ +.++.+|+|+-.+...... ... .+.+.. ...+++.+++-..... ...
T Consensus 184 ~~~~~--~~~~k~ILyaPT~R~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~li~k~Hp~~----------------~~~ 243 (369)
T PF04464_consen 184 KKLGI--DKDKKVILYAPTWRDNSSNEYFKFFFSDLDFEKLNF--LLKNNYVLIIKPHPNM----------------KKK 243 (369)
T ss_dssp HHTT----SS-EEEEEE----GGG--GGSS----TT-HHHHHH--HHTTTEEEEE--SHHH----------------HTT
T ss_pred HHhcc--CCCCcEEEEeeccccccccccccccccccCHHHHHH--HhCCCcEEEEEeCchh----------------hhc
Confidence 44666 6677799999765442221 111 222222 2336788777655422 111
Q ss_pred HHH-cCCCCcEEEcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEc--Cc-------cccccc
Q 003726 623 IKQ-YNLHGQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFAT--CH-------GGPAEI 692 (800)
Q Consensus 623 i~~-~gL~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT--~~-------GG~~Ei 692 (800)
... ....++|.+... ..++..++.. +|++|. -++-++.|++.+++|||-. |. |...+
T Consensus 244 ~~~~~~~~~~i~~~~~------~~~~~~ll~~-aDiLIT-----DySSi~fD~~~l~KPiify~~D~~~Y~~~rg~~~~- 310 (369)
T PF04464_consen 244 FKDFKEDNSNIIFVSD------NEDIYDLLAA-ADILIT-----DYSSIIFDFLLLNKPIIFYQPDLEEYEKERGFYFD- 310 (369)
T ss_dssp ----TT-TTTEEE-TT-------S-HHHHHHT--SEEEE-----SS-THHHHHGGGT--EEEE-TTTTTTTTTSSBSS--
T ss_pred hhhhhccCCcEEECCC------CCCHHHHHHh-cCEEEE-----echhHHHHHHHhCCCEEEEeccHHHHhhccCCCCc-
Confidence 111 334578888751 2378888886 999886 4677899999999999954 32 22233
Q ss_pred cccCceEEEECCCCHHHHHHHHHHHH
Q 003726 693 IEHGVSGFHIDPYHPDQVAELMIEFF 718 (800)
Q Consensus 693 I~dg~~G~lv~p~d~e~lA~aI~~~l 718 (800)
..+...|-.+. +.+++.++|..++
T Consensus 311 ~~~~~pg~~~~--~~~eL~~~i~~~~ 334 (369)
T PF04464_consen 311 YEEDLPGPIVY--NFEELIEAIENII 334 (369)
T ss_dssp TTTSSSS-EES--SHHHHHHHHTTHH
T ss_pred hHhhCCCceeC--CHHHHHHHHHhhh
Confidence 22334555564 7899999997765
No 164
>PLN02764 glycosyltransferase family protein
Probab=93.29 E-value=20 Score=41.70 Aligned_cols=72 Identities=7% Similarity=0.031 Sum_probs=47.4
Q ss_pred ccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcCc----ccccccccc-CceEEEECC-----CCHHHH
Q 003726 641 RVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATCH----GGPAEIIEH-GVSGFHIDP-----YHPDQV 710 (800)
Q Consensus 641 ~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~~----GG~~EiI~d-g~~G~lv~p-----~d~e~l 710 (800)
+++..++...= +.++||.= +=-++++||+.+|+|+|+-.. ...+..+.+ -+.|+.+.+ -+.+++
T Consensus 324 W~PQ~~vL~h~--~v~~FvtH----~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~~~~~~~e~i 397 (453)
T PLN02764 324 WVQQPLILSHP--SVGCFVSH----CGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREETGWFSKESL 397 (453)
T ss_pred CCCHHHHhcCc--ccCeEEec----CCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEeccccCCccCHHHH
Confidence 66777777631 24556652 334689999999999999743 334555543 456776532 267888
Q ss_pred HHHHHHHH
Q 003726 711 AELMIEFF 718 (800)
Q Consensus 711 A~aI~~~l 718 (800)
++++.+++
T Consensus 398 ~~av~~vm 405 (453)
T PLN02764 398 RDAINSVM 405 (453)
T ss_pred HHHHHHHh
Confidence 88887766
No 165
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=92.86 E-value=9.7 Score=40.73 Aligned_cols=112 Identities=10% Similarity=0.015 Sum_probs=66.3
Q ss_pred CCCCcEEEEEecCCCCCCH--HHHHH---HHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHH-cCCCCc
Q 003726 558 DRSKPLIFSMARLDGVKNL--TGLVE---CYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQ-YNLHGQ 631 (800)
Q Consensus 558 ~~~k~iIl~vGRL~~~Kgl--~~Lle---A~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~-~gL~~~ 631 (800)
.+...+-+++|.-.+.-.. +.+.+ ++-+..+ .....+++--+-.. -+..+.+++. +.-..-
T Consensus 159 ~~rq~vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~-~~g~~~lisfSRRT------------p~~~~s~l~~~l~s~~~ 225 (329)
T COG3660 159 LPRQRVAVLVGGNNKAFVFQEDKAHQFASLLVKILE-NQGGSFLISFSRRT------------PDTVKSILKNNLNSSPG 225 (329)
T ss_pred CCCceEEEEecCCCCCCccCHHHHHHHHHHHHHHHH-hCCceEEEEeecCC------------cHHHHHHHHhccccCce
Confidence 4566777888876654443 22222 2222211 13567777776655 2455555555 444566
Q ss_pred EEEcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcCcccc
Q 003726 632 FRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGP 689 (800)
Q Consensus 632 V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~~GG~ 689 (800)
+.|-+.-++.. -...+++. ||.++.....- .-+-||.+.|+||++....+.
T Consensus 226 i~w~~~d~g~N---PY~~~La~-Adyii~TaDSi---nM~sEAasTgkPv~~~~~~~~ 276 (329)
T COG3660 226 IVWNNEDTGYN---PYIDMLAA-ADYIISTADSI---NMCSEAASTGKPVFILEPPNF 276 (329)
T ss_pred eEeCCCCCCCC---chHHHHhh-cceEEEecchh---hhhHHHhccCCCeEEEecCCc
Confidence 77776433222 34556665 99999885432 236899999999998754443
No 166
>PLN03015 UDP-glucosyl transferase
Probab=91.96 E-value=30 Score=40.46 Aligned_cols=72 Identities=19% Similarity=0.124 Sum_probs=42.9
Q ss_pred ccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcCc----ccccccc-ccCceEEEEC------CCCHHH
Q 003726 641 RVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATCH----GGPAEII-EHGVSGFHID------PYHPDQ 709 (800)
Q Consensus 641 ~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~~----GG~~EiI-~dg~~G~lv~------p~d~e~ 709 (800)
+++..++...= +.+.||.= +=-++++||+.+|+|+|+-.. .-.+..+ +.-+.|.-+. .-..++
T Consensus 342 W~PQ~~vL~h~--~vg~fvtH----~GwnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~~~~~v~~e~ 415 (470)
T PLN03015 342 WAPQVEILSHR--SIGGFLSH----CGWSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELPSEKVIGREE 415 (470)
T ss_pred cCCHHHHhccC--ccCeEEec----CCchhHHHHHHcCCCEEecccccchHHHHHHHHHHhCeeEEecccccCCccCHHH
Confidence 55666766531 13445542 223589999999999999733 3334434 3445666653 125667
Q ss_pred HHHHHHHHH
Q 003726 710 VAELMIEFF 718 (800)
Q Consensus 710 lA~aI~~~l 718 (800)
++++|.+++
T Consensus 416 i~~~v~~lm 424 (470)
T PLN03015 416 VASLVRKIV 424 (470)
T ss_pred HHHHHHHHH
Confidence 777776665
No 167
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Probab=91.48 E-value=12 Score=41.14 Aligned_cols=51 Identities=18% Similarity=0.180 Sum_probs=34.8
Q ss_pred CCcHHHHHHHHcCCcEEEcCcc---ccccccccCceEEEECCCCHHHHHHHHHHHH
Q 003726 666 AFGLTVVEAMTCGLPTFATCHG---GPAEIIEHGVSGFHIDPYHPDQVAELMIEFF 718 (800)
Q Consensus 666 ~fGl~vlEAMA~GlPVIAT~~G---G~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l 718 (800)
+-|.-.-||...|+|.|.+.-| +..+.. -..|.++..+|+.+..+...+.+
T Consensus 259 ~ggTMarEaAlLGtpaIs~~pGkll~vdk~l--ie~G~~~~s~~~~~~~~~a~~~l 312 (346)
T COG1817 259 AGGTMAREAALLGTPAISCYPGKLLAVDKYL--IEKGLLYHSTDEIAIVEYAVRNL 312 (346)
T ss_pred CCchHHHHHHHhCCceEEecCCccccccHHH--HhcCceeecCCHHHHHHHHHHHh
Confidence 4566678999999999998744 233333 23678888788886666665544
No 168
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=91.05 E-value=11 Score=40.18 Aligned_cols=104 Identities=14% Similarity=0.179 Sum_probs=61.6
Q ss_pred CCCCcEEEEEecCCCC-------CCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHc-CCC
Q 003726 558 DRSKPLIFSMARLDGV-------KNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQY-NLH 629 (800)
Q Consensus 558 ~~~k~iIl~vGRL~~~-------Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~-gL~ 629 (800)
..++++|++....... .+...+++.+..+.+..|+++++|-=.... ....+. .+.++. +.
T Consensus 114 ~~~~~~vlv~lQ~~~D~~i~~~~~~~~~~~~~l~~~~~~~p~~~lvvK~HP~~-~~~~~~----------~~~~~~~~~- 181 (269)
T PF05159_consen 114 SKNKKYVLVPLQVENDSQIRYHSPSQADFLDMLESFAKENPDAKLVVKPHPDE-RGGNKY----------SYLEELPNL- 181 (269)
T ss_pred cCCCCEEEEEeeCCcCcchhccCCcHhHHHHHHHHHHHHCCCCEEEEEECchh-hCCCCh----------hHhhhhhcC-
Confidence 5678888888887653 234556666666666667888876544321 000000 222222 33
Q ss_pred CcEEEcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcC
Q 003726 630 GQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATC 685 (800)
Q Consensus 630 ~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~ 685 (800)
.++.+.. +. ..++.++.. +|.++.- .+.+-+||+.+|+||++..
T Consensus 182 ~~~~~~~---~~---~~~~~Ll~~-s~~Vvti-----nStvGlEAll~gkpVi~~G 225 (269)
T PF05159_consen 182 PNVVIID---DD---VNLYELLEQ-SDAVVTI-----NSTVGLEALLHGKPVIVFG 225 (269)
T ss_pred CCeEEEC---CC---CCHHHHHHh-CCEEEEE-----CCHHHHHHHHcCCceEEec
Confidence 3444442 12 346666765 7666653 4568999999999999964
No 169
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=90.76 E-value=0.11 Score=51.40 Aligned_cols=91 Identities=18% Similarity=0.278 Sum_probs=57.1
Q ss_pred CcEEEcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcCccc--------cccccccCceEEE
Q 003726 630 GQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG--------PAEIIEHGVSGFH 701 (800)
Q Consensus 630 ~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~~GG--------~~EiI~dg~~G~l 701 (800)
.+|.+.++.. ++..+|+. ||+.|.- +=+.|+.|++++|+|.|.-...+ .+..+.+...|..
T Consensus 55 ~~v~~~~~~~------~m~~~m~~-aDlvIs~----aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~ 123 (167)
T PF04101_consen 55 PNVKVFGFVD------NMAELMAA-ADLVISH----AGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIM 123 (167)
T ss_dssp CCCEEECSSS------SHHHHHHH-HSEEEEC----S-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCC
T ss_pred CcEEEEechh------hHHHHHHH-cCEEEeC----CCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCccc
Confidence 6788888533 47888886 9988873 34579999999999998875555 3333444445554
Q ss_pred ECCC--CHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 003726 702 IDPY--HPDQVAELMIEFFEKCYNDPSHWNKISDGG 735 (800)
Q Consensus 702 v~p~--d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a 735 (800)
+... +++.+.++| ..+..++.....|++++
T Consensus 124 ~~~~~~~~~~L~~~i----~~l~~~~~~~~~~~~~~ 155 (167)
T PF04101_consen 124 LDESELNPEELAEAI----EELLSDPEKLKEMAKAA 155 (167)
T ss_dssp SECCC-SCCCHHHHH----HCHCCCHH-SHHHCCCH
T ss_pred cCcccCCHHHHHHHH----HHHHcCcHHHHHHHHHH
Confidence 4332 356677777 44558888777766654
No 170
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=89.83 E-value=1.1 Score=52.28 Aligned_cols=134 Identities=13% Similarity=0.080 Sum_probs=73.6
Q ss_pred CCcEEEEEecCCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEccccc
Q 003726 560 SKPLIFSMARLDGVKNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISAQM 639 (800)
Q Consensus 560 ~k~iIl~vGRL~~~Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~~~ 639 (800)
+..++++.|.+.. ...+..++.+.+.-+.-|+ ++++.-++.. .. .+++++....
T Consensus 276 ~~vv~vsfGs~~~-~~~~~~~~~~~~~~~~~~~-~~iW~~~~~~------------~~---------~l~~n~~~~~--- 329 (500)
T PF00201_consen 276 KGVVYVSFGSIVS-SMPEEKLKEIAEAFENLPQ-RFIWKYEGEP------------PE---------NLPKNVLIVK--- 329 (500)
T ss_dssp TEEEEEE-TSSST-T-HHHHHHHHHHHHHCSTT-EEEEEETCSH------------GC---------HHHTTEEEES---
T ss_pred CCEEEEecCcccc-hhHHHHHHHHHHHHhhCCC-cccccccccc------------cc---------cccceEEEec---
Confidence 3456778888753 2333323333332222344 6777665532 01 1235776665
Q ss_pred CccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcC----ccccccccccCceEEEECCC--CHHHHHHH
Q 003726 640 NRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATC----HGGPAEIIEHGVSGFHIDPY--HPDQVAEL 713 (800)
Q Consensus 640 ~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~----~GG~~EiI~dg~~G~lv~p~--d~e~lA~a 713 (800)
++|..++...= ..++||. -+=-+++.||+.+|+|+|+-. ....+..+++.+.|..++.. +.+++.++
T Consensus 330 -W~PQ~~lL~hp--~v~~fit----HgG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~G~g~~l~~~~~~~~~l~~a 402 (500)
T PF00201_consen 330 -WLPQNDLLAHP--RVKLFIT----HGGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEKGVGVVLDKNDLTEEELRAA 402 (500)
T ss_dssp -S--HHHHHTST--TEEEEEE----S--HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHTTSEEEEGGGC-SHHHHHHH
T ss_pred -cccchhhhhcc--cceeeee----ccccchhhhhhhccCCccCCCCcccCCccceEEEEEeeEEEEEecCCcHHHHHHH
Confidence 67777776410 1345554 233457999999999999973 34456666777788888754 45777777
Q ss_pred HHHHHHHhcCCHHHHHH
Q 003726 714 MIEFFEKCYNDPSHWNK 730 (800)
Q Consensus 714 I~~~l~~l~~dp~~~~~ 730 (800)
|.+++ .|+.+.+.
T Consensus 403 i~~vl----~~~~y~~~ 415 (500)
T PF00201_consen 403 IREVL----ENPSYKEN 415 (500)
T ss_dssp HHHHH----HSHHHHHH
T ss_pred HHHHH----hhhHHHHH
Confidence 76665 78876544
No 171
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=87.78 E-value=3.4 Score=44.30 Aligned_cols=100 Identities=15% Similarity=0.093 Sum_probs=64.3
Q ss_pred EEEEEecCCCCC--CHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEcccccC
Q 003726 563 LIFSMARLDGVK--NLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISAQMN 640 (800)
Q Consensus 563 iIl~vGRL~~~K--gl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~~~~ 640 (800)
+++..|.-...| ..+...+.+..+.+. +++++++|+..+ .+...++.+..+-...+.+.|
T Consensus 124 i~i~~~~~~~~k~w~~~~~~~l~~~l~~~--~~~ivl~g~~~e------------~~~~~~i~~~~~~~~~~~~~~---- 185 (279)
T cd03789 124 VVLPPGASGPAKRWPAERFAALADRLLAR--GARVVLTGGPAE------------RELAEEIAAALGGPRVVNLAG---- 185 (279)
T ss_pred EEECCCCCCccccCCHHHHHHHHHHHHHC--CCEEEEEechhh------------HHHHHHHHHhcCCCccccCcC----
Confidence 344454444444 446777777777654 789999987654 334444455443223344555
Q ss_pred ccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcCc
Q 003726 641 RVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATCH 686 (800)
Q Consensus 641 ~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~~ 686 (800)
..+-.++..+++. +|++|-+- .|. +--|.+.|+|+|+--.
T Consensus 186 ~~~l~e~~~li~~-~~l~I~~D----sg~-~HlA~a~~~p~i~l~g 225 (279)
T cd03789 186 KTSLRELAALLAR-ADLVVTND----SGP-MHLAAALGTPTVALFG 225 (279)
T ss_pred CCCHHHHHHHHHh-CCEEEeeC----CHH-HHHHHHcCCCEEEEEC
Confidence 4567899999997 99999873 244 3344699999998743
No 172
>PLN03004 UDP-glycosyltransferase
Probab=86.81 E-value=14 Score=42.96 Aligned_cols=84 Identities=14% Similarity=0.090 Sum_probs=55.6
Q ss_pred CcEEEcccccCccChHHHHHHHHccCcE--EEecCCCCCCcHHHHHHHHcCCcEEEc----Ccccccccccc-CceEEEE
Q 003726 630 GQFRWISAQMNRVRNGELYRYIADTRGV--FVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEH-GVSGFHI 702 (800)
Q Consensus 630 ~~V~flG~~~~~v~~~el~~~ia~aadv--fV~PS~~E~fGl~vlEAMA~GlPVIAT----~~GG~~EiI~d-g~~G~lv 702 (800)
.++...+ +++..++.. .+++ ||. . +=-++++||+++|+|+|+- +.......+.+ -+.|..+
T Consensus 334 ~g~~v~~----W~PQ~~iL~----H~~v~~FvT--H--~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l 401 (451)
T PLN03004 334 KGMVVKS----WAPQVPVLN----HKAVGGFVT--H--CGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISM 401 (451)
T ss_pred CcEEEEe----eCCHHHHhC----CCccceEec--c--CcchHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEe
Confidence 4566665 566677665 3555 543 1 2235899999999999997 44555656654 3688877
Q ss_pred CC-----CCHHHHHHHHHHHHHHhcCCHHHHH
Q 003726 703 DP-----YHPDQVAELMIEFFEKCYNDPSHWN 729 (800)
Q Consensus 703 ~p-----~d~e~lA~aI~~~l~~l~~dp~~~~ 729 (800)
+. -+.++++++|.+++ .|+.+++
T Consensus 402 ~~~~~~~~~~e~l~~av~~vm----~~~~~r~ 429 (451)
T PLN03004 402 NESETGFVSSTEVEKRVQEII----GECPVRE 429 (451)
T ss_pred cCCcCCccCHHHHHHHHHHHh----cCHHHHH
Confidence 53 26788888887766 6655433
No 173
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=85.17 E-value=2.2 Score=38.56 Aligned_cols=84 Identities=15% Similarity=0.225 Sum_probs=57.6
Q ss_pred EEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEcccccCccChHH--HHHHHHccCcEEEecCCCCC---CcH
Q 003726 595 LVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISAQMNRVRNGE--LYRYIADTRGVFVQPAFYEA---FGL 669 (800)
Q Consensus 595 LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~~~~~v~~~e--l~~~ia~aadvfV~PS~~E~---fGl 669 (800)
++|||+-.+ ....+.+.++++| ..+.++|... .....+ +...+.+ +|+.|++.-+=+ .-.
T Consensus 2 vliVGG~~~-----------~~~~~~~~~~~~G--~~~~~hg~~~-~~~~~~~~l~~~i~~-aD~VIv~t~~vsH~~~~~ 66 (97)
T PF10087_consen 2 VLIVGGRED-----------RERRYKRILEKYG--GKLIHHGRDG-GDEKKASRLPSKIKK-ADLVIVFTDYVSHNAMWK 66 (97)
T ss_pred EEEEcCCcc-----------cHHHHHHHHHHcC--CEEEEEecCC-CCccchhHHHHhcCC-CCEEEEEeCCcChHHHHH
Confidence 578888433 2578888999998 4566663222 223333 8888886 999999887544 334
Q ss_pred HHHHHHHcCCcEEEcCcccccccc
Q 003726 670 TVVEAMTCGLPTFATCHGGPAEII 693 (800)
Q Consensus 670 ~vlEAMA~GlPVIAT~~GG~~EiI 693 (800)
+--+|-..|+|++.++..|...+.
T Consensus 67 vk~~akk~~ip~~~~~~~~~~~l~ 90 (97)
T PF10087_consen 67 VKKAAKKYGIPIIYSRSRGVSSLE 90 (97)
T ss_pred HHHHHHHcCCcEEEECCCCHHHHH
Confidence 456788899999999866665543
No 174
>PLN02534 UDP-glycosyltransferase
Probab=84.54 E-value=92 Score=36.70 Aligned_cols=79 Identities=11% Similarity=0.062 Sum_probs=45.4
Q ss_pred CcEEEcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccc-cCceEEEEC-
Q 003726 630 GQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG----PAEIIE-HGVSGFHID- 703 (800)
Q Consensus 630 ~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~~GG----~~EiI~-dg~~G~lv~- 703 (800)
.++.+.| +++..++... . +.++||.- +=.++++||+.+|+|+|+-...+ ....+. .-+.|+-+.
T Consensus 344 ~g~~v~~----w~pq~~iL~h-~-~v~~fvtH----~G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vGv~~~~ 413 (491)
T PLN02534 344 RGLLIKG----WAPQVLILSH-P-AIGGFLTH----CGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVRVGV 413 (491)
T ss_pred CCeeccC----CCCHHHHhcC-C-ccceEEec----CccHHHHHHHHcCCCEEeccccccHHHHHHHHHHhhcceEEecc
Confidence 4566666 5666666653 1 12235542 33468999999999999974322 222232 223344331
Q ss_pred --------------CCCHHHHHHHHHHHH
Q 003726 704 --------------PYHPDQVAELMIEFF 718 (800)
Q Consensus 704 --------------p~d~e~lA~aI~~~l 718 (800)
--+.+++++++.+++
T Consensus 414 ~~~~~~~~~~~~~~~v~~eev~~~v~~~m 442 (491)
T PLN02534 414 EVPVRWGDEERVGVLVKKDEVEKAVKTLM 442 (491)
T ss_pred cccccccccccccCccCHHHHHHHHHHHh
Confidence 025678888887766
No 175
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=83.89 E-value=14 Score=42.94 Aligned_cols=142 Identities=18% Similarity=0.160 Sum_probs=72.2
Q ss_pred CCcEEEEEecCCC--CCCHHHHHHHHHHhhccCCCeEEEEEeccCCC-CCccchHHHHHHHHHHHHHHHcCCCCcEEEcc
Q 003726 560 SKPLIFSMARLDG--VKNLTGLVECYGKSSKLRELVNLVVVGGYMDV-KNSRDREEMAEIEKMHGLIKQYNLHGQFRWIS 636 (800)
Q Consensus 560 ~k~iIl~vGRL~~--~Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~-~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG 636 (800)
+.-+.++.|.+.. .+.+..+..++..+. .+++++=..+.. ..+.+.+..........+.++. .++..+.+
T Consensus 261 ~sVvyvsfGS~~~l~~~q~~ela~gL~~s~-----~~flWv~r~~~~~~~~~~~~~~~~~~~~~~f~e~~--~~~g~v~~ 333 (455)
T PLN02152 261 SSVIYVSFGTMVELSKKQIEELARALIEGK-----RPFLWVITDKLNREAKIEGEEETEIEKIAGFRHEL--EEVGMIVS 333 (455)
T ss_pred CceEEEEecccccCCHHHHHHHHHHHHHcC-----CCeEEEEecCcccccccccccccccccchhHHHhc--cCCeEEEe
Confidence 3456778887653 345555666666543 255554332110 0000000000000012222222 35555555
Q ss_pred cccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEc----CccccccccccC-ceEEEEC-----CCC
Q 003726 637 AQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEHG-VSGFHID-----PYH 706 (800)
Q Consensus 637 ~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT----~~GG~~EiI~dg-~~G~lv~-----p~d 706 (800)
+++..++...= +.++||.= +=.++++||+.+|+|+|+- |....+..+.+. +.|+-+. .-+
T Consensus 334 ----W~PQ~~iL~h~--~vg~fvtH----~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~ 403 (455)
T PLN02152 334 ----WCSQIEVLRHR--AVGCFVTH----CGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVRENSEGLVE 403 (455)
T ss_pred ----eCCHHHHhCCc--ccceEEee----CCcccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeecCcCCcCc
Confidence 56666766521 12245432 2335899999999999997 344444555442 3455442 236
Q ss_pred HHHHHHHHHHHH
Q 003726 707 PDQVAELMIEFF 718 (800)
Q Consensus 707 ~e~lA~aI~~~l 718 (800)
.+++++++.+++
T Consensus 404 ~e~l~~av~~vm 415 (455)
T PLN02152 404 RGEIRRCLEAVM 415 (455)
T ss_pred HHHHHHHHHHHH
Confidence 788888887776
No 176
>PLN02167 UDP-glycosyltransferase family protein
Probab=83.27 E-value=42 Score=39.29 Aligned_cols=78 Identities=17% Similarity=0.128 Sum_probs=48.8
Q ss_pred CcEEEcccccCccChHHHHHHHHccCcEEEecCCCCCCc-HHHHHHHHcCCcEEEcC----cccccc-ccccCceEEEEC
Q 003726 630 GQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFG-LTVVEAMTCGLPTFATC----HGGPAE-IIEHGVSGFHID 703 (800)
Q Consensus 630 ~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fG-l~vlEAMA~GlPVIAT~----~GG~~E-iI~dg~~G~lv~ 703 (800)
++....+ +++..++...- +.++||.= +| ++++||+++|+|+|+-. ..-... +++.-+.|..+.
T Consensus 340 ~rg~v~~----w~PQ~~iL~h~--~vg~fvtH-----~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~ 408 (475)
T PLN02167 340 GRGLVCG----WAPQVEILAHK--AIGGFVSH-----CGWNSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELR 408 (475)
T ss_pred cCeeeec----cCCHHHHhcCc--ccCeEEee-----CCcccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEee
Confidence 3445555 56667776532 14456652 33 47999999999999873 333332 344556787764
Q ss_pred C---------CCHHHHHHHHHHHH
Q 003726 704 P---------YHPDQVAELMIEFF 718 (800)
Q Consensus 704 p---------~d~e~lA~aI~~~l 718 (800)
. -+.+++++++.+++
T Consensus 409 ~~~~~~~~~~~~~~~l~~av~~~m 432 (475)
T PLN02167 409 LDYVSAYGEIVKADEIAGAVRSLM 432 (475)
T ss_pred cccccccCCcccHHHHHHHHHHHh
Confidence 2 26778888887766
No 177
>COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis]
Probab=83.22 E-value=89 Score=35.53 Aligned_cols=98 Identities=16% Similarity=0.262 Sum_probs=57.2
Q ss_pred HHHHHHcCCCCcEEEcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcCccc-ccccccc-Cc
Q 003726 620 HGLIKQYNLHGQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG-PAEIIEH-GV 697 (800)
Q Consensus 620 ~~li~~~gL~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~~GG-~~EiI~d-g~ 697 (800)
+.++....-..+|.+.. +. ...++-..++. +|++|-.-+ -+++=||+.|+|+|+-.+-. ...+.++ |-
T Consensus 256 ~~ia~~~~~~~~i~~~~---d~-~~~~~~~~l~~-~dl~Vg~R~-----HsaI~al~~g~p~i~i~Y~~K~~~l~~~~gl 325 (385)
T COG2327 256 DAIAQLVLDSAEILVSS---DE-YAEELGGILAA-CDLIVGMRL-----HSAIMALAFGVPAIAIAYDPKVRGLMQDLGL 325 (385)
T ss_pred HHHHhhcCCccceEeec---ch-HHHHHHHHhcc-CceEEeehh-----HHHHHHHhcCCCeEEEeecHHHHHHHHHcCC
Confidence 33333333236777764 11 13555667775 877775433 24788999999999975432 2223332 33
Q ss_pred eEE--EECCCCHHHHHHHHHHHHHHhcCCHHHHHH
Q 003726 698 SGF--HIDPYHPDQVAELMIEFFEKCYNDPSHWNK 730 (800)
Q Consensus 698 ~G~--lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ 730 (800)
.|+ .+.|.|.+.+.+...+.+. .+++.+++
T Consensus 326 ~~~~~~i~~~~~~~l~~~~~e~~~---~~~~~~~~ 357 (385)
T COG2327 326 PGFAIDIDPLDAEILSAVVLERLT---KLDELRER 357 (385)
T ss_pred CcccccCCCCchHHHHHHHHHHHh---ccHHHHhh
Confidence 444 4567788888888877663 55554443
No 178
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=80.65 E-value=15 Score=40.42 Aligned_cols=100 Identities=16% Similarity=0.089 Sum_probs=62.2
Q ss_pred CCc-EEEEEec-CCCCCCHH--HHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEc
Q 003726 560 SKP-LIFSMAR-LDGVKNLT--GLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWI 635 (800)
Q Consensus 560 ~k~-iIl~vGR-L~~~Kgl~--~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~fl 635 (800)
+++ +++..|. ..+.|... ...+.+..+.+ .+.+++++|+..+ .+...++.+..+ ...+.+.
T Consensus 173 ~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~--~~~~ivl~G~~~e------------~~~~~~i~~~~~-~~~~~l~ 237 (334)
T TIGR02195 173 ERPIIAFCPGAEFGPAKRWPHEHYAELAKRLID--QGYQVVLFGSAKD------------HPAGNEIEALLP-GELRNLA 237 (334)
T ss_pred CCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHH--CCCEEEEEEChhh------------HHHHHHHHHhCC-cccccCC
Confidence 344 4455554 34556544 67777766654 2578899988654 233334444332 1223355
Q ss_pred ccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEc
Q 003726 636 SAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFAT 684 (800)
Q Consensus 636 G~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT 684 (800)
| ..+-.++..+++. +|++|..- .|. +==|-|.|+|+|+-
T Consensus 238 g----~~sL~el~ali~~-a~l~I~~D----SGp-~HlAaA~~~P~i~l 276 (334)
T TIGR02195 238 G----ETSLDEAVDLIAL-AKAVVTND----SGL-MHVAAALNRPLVAL 276 (334)
T ss_pred C----CCCHHHHHHHHHh-CCEEEeeC----CHH-HHHHHHcCCCEEEE
Confidence 6 5678899999997 99999862 222 34467999999985
No 179
>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB. The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395).
Probab=80.34 E-value=76 Score=34.30 Aligned_cols=86 Identities=15% Similarity=0.139 Sum_probs=50.7
Q ss_pred HHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEcccccCccChHHHHHHHHccC
Q 003726 576 LTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISAQMNRVRNGELYRYIADTR 655 (800)
Q Consensus 576 l~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~~~~~v~~~el~~~ia~aa 655 (800)
+..+.+++..+.+. .+.+++++..... .| .+..+++.+.+.-...| +. ..+..++...++. +
T Consensus 190 ~~~l~~~l~~l~~~-~g~~v~~i~~~~~----~D------~~~~~~l~~~~~~~~~i--~~----~~~~~e~~~~i~~-~ 251 (298)
T TIGR03609 190 LLRLLRALDRLQRD-TGAFVLFLPFQQP----QD------LPLARALRDQLLGPAEV--LS----PLDPEELLGLFAS-A 251 (298)
T ss_pred HHHHHHHHHHHHHh-hCCeEEEEeCCcc----hh------HHHHHHHHHhcCCCcEE--Ee----cCCHHHHHHHHhh-C
Confidence 44566666666443 2455655554321 11 23334444444322333 22 3456899999996 8
Q ss_pred cEEEecCCCCCCcHHHHHHHHcCCcEEEc
Q 003726 656 GVFVQPAFYEAFGLTVVEAMTCGLPTFAT 684 (800)
Q Consensus 656 dvfV~PS~~E~fGl~vlEAMA~GlPVIAT 684 (800)
+++|--.++ .++=|+++|+|+|+-
T Consensus 252 ~~vI~~RlH-----~~I~A~~~gvP~i~i 275 (298)
T TIGR03609 252 RLVIGMRLH-----ALILAAAAGVPFVAL 275 (298)
T ss_pred CEEEEechH-----HHHHHHHcCCCEEEe
Confidence 877665442 478899999999975
No 180
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=80.34 E-value=13 Score=38.72 Aligned_cols=103 Identities=15% Similarity=0.096 Sum_probs=59.7
Q ss_pred CCCcEEEEEecCCCCCCHHH--HHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEcc
Q 003726 559 RSKPLIFSMARLDGVKNLTG--LVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWIS 636 (800)
Q Consensus 559 ~~k~iIl~vGRL~~~Kgl~~--LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG 636 (800)
+++.+++..|.=.+.|.... ..+.+..+.+.. .+++++|+..+ .+.+....+.+... ...+.+.|
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~--~~vvl~g~~~~----------~~~~~~~~~~~~~~-~~~~~~~~ 170 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPAEKWAELIERLKERG--YRVVLLGGPEE----------QEKEIADQIAAGLQ-NPVINLAG 170 (247)
T ss_dssp TSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT---EEEE--SSHH----------HHHHHHHHHHTTHT-TTTEEETT
T ss_pred cCCeEEEeecCCCccccCCHHHHHHHHHHHHhhC--ceEEEEccchH----------HHHHHHHHHHHhcc-cceEeecC
Confidence 44556667776666676544 777777776643 78888888744 11223333333332 12677877
Q ss_pred cccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEc
Q 003726 637 AQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFAT 684 (800)
Q Consensus 637 ~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT 684 (800)
..+-.++..+++. +|++|.+ ++. .+-=|.|.|+|+|+-
T Consensus 171 ----~~~l~e~~ali~~-a~~~I~~---Dtg--~~HlA~a~~~p~v~l 208 (247)
T PF01075_consen 171 ----KTSLRELAALISR-ADLVIGN---DTG--PMHLAAALGTPTVAL 208 (247)
T ss_dssp ----TS-HHHHHHHHHT-SSEEEEE---SSH--HHHHHHHTT--EEEE
T ss_pred ----CCCHHHHHHHHhc-CCEEEec---CCh--HHHHHHHHhCCEEEE
Confidence 5678899999996 9999987 222 245578899999987
No 181
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=79.90 E-value=16 Score=40.69 Aligned_cols=104 Identities=9% Similarity=0.028 Sum_probs=64.2
Q ss_pred CCcEEEEEecCCCCCCH--HHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEccc
Q 003726 560 SKPLIFSMARLDGVKNL--TGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISA 637 (800)
Q Consensus 560 ~k~iIl~vGRL~~~Kgl--~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~ 637 (800)
++.+++..|.-.+.|.. +...+.+..+.+ .+.+++++|+..+ + +.+...++++.......+.+.|
T Consensus 183 ~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~--~~~~vvl~ggp~e-------~---e~~~~~~i~~~~~~~~~~~l~g- 249 (352)
T PRK10422 183 QNYVVIQPTARQIFKCWDNDKFSAVIDALQA--RGYEVVLTSGPDK-------D---DLACVNEIAQGCQTPPVTALAG- 249 (352)
T ss_pred CCeEEEecCCCccccCCCHHHHHHHHHHHHH--CCCeEEEEcCCCh-------H---HHHHHHHHHHhcCCCccccccC-
Confidence 34566677765556654 466666666643 3678888887543 1 1222333444332223355666
Q ss_pred ccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcC
Q 003726 638 QMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATC 685 (800)
Q Consensus 638 ~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~ 685 (800)
..+-.++..+++. +++||-.- .|. +-=|-|.|+|||+--
T Consensus 250 ---~~sL~el~ali~~-a~l~v~nD----SGp-~HlAaA~g~P~v~lf 288 (352)
T PRK10422 250 ---KTTFPELGALIDH-AQLFIGVD----SAP-AHIAAAVNTPLICLF 288 (352)
T ss_pred ---CCCHHHHHHHHHh-CCEEEecC----CHH-HHHHHHcCCCEEEEE
Confidence 6678999999997 99999862 233 344668999999863
No 182
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=78.36 E-value=11 Score=38.26 Aligned_cols=77 Identities=14% Similarity=0.080 Sum_probs=31.8
Q ss_pred HHHHHHHhCCCceEEEECCCCchHHHHHHHhcCCCeEEEEecCCccccCCCChhhHHhhhhhhccchhhhHHHHHhccCC
Q 003726 386 SNEIAAELQGVPDLIIGNYSDGNLVATLLSYKLGVTQCNIAHALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNNAD 465 (800)
Q Consensus 386 ~~~ll~~~~~~PDIIh~h~~~~~lva~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD 465 (800)
.+.+++.. +||+++.-..+...--...+++.|+|++..---+... +...|+.+ .. .-+..++..|
T Consensus 87 ~~rfl~~~--~P~~~i~~EtElWPnll~~a~~~~ip~~LvNarls~~----s~~~~~~~-------~~--~~r~~l~~f~ 151 (186)
T PF04413_consen 87 VRRFLDHW--RPDLLIWVETELWPNLLREAKRRGIPVVLVNARLSER----SFRRYRRF-------PF--LFRPLLSRFD 151 (186)
T ss_dssp HHHHHHHH----SEEEEES----HHHHHH-----S-EEEEEE-------------------------H--HHHHHGGG-S
T ss_pred HHHHHHHh--CCCEEEEEccccCHHHHHHHhhcCCCEEEEeeeeccc----cchhhhhh-------HH--HHHHHHHhCC
Confidence 34445544 8999987666543333345667789977643222110 11111111 11 1234788999
Q ss_pred EEEecCHHHHhh
Q 003726 466 FIITSTYQEIAG 477 (800)
Q Consensus 466 ~IIt~S~~ei~~ 477 (800)
.|.+.|+..++.
T Consensus 152 ~i~aqs~~da~r 163 (186)
T PF04413_consen 152 RILAQSEADAER 163 (186)
T ss_dssp EEEESSHHHHHH
T ss_pred EEEECCHHHHHH
Confidence 999999987763
No 183
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=76.46 E-value=11 Score=44.12 Aligned_cols=101 Identities=11% Similarity=0.004 Sum_probs=64.3
Q ss_pred HHHHhccCCEEEecCHHHHhhcccCccccccccccccccceeeeccCCCCCCceEEecCCCCCCCCCCCChHHHHHHHhh
Q 003726 457 DLTAMNNADFIITSTYQEIAGSKNNVGQYENHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSDKEKRLIALH 536 (800)
Q Consensus 457 e~~a~~~AD~IIt~S~~ei~~~~~~~gqy~~~~~f~~p~l~~vv~Gi~v~~~k~~VIpnGvD~~~f~p~~~~~~rl~~~~ 536 (800)
+.-....+|.+++.|+..+...+..+ ..++ ..++.+.++++|.+.+.+......
T Consensus 203 e~e~~~~~~~~~~ns~~~~~~f~~~~------------------~~L~--~~d~~~~y~ei~~s~~~~~~~~~~------ 256 (495)
T KOG0853|consen 203 EEETTGLAWKILVNSYFTKRQFKATF------------------VSLS--NSDITSTYPEIDGSWFTYGQYESH------ 256 (495)
T ss_pred hhhhhhccceEecchhhhhhhhhhhh------------------hhcC--CCCcceeeccccchhccccccccc------
Confidence 33456788999999986544222221 1122 344889999999888776221111
Q ss_pred ccccccccCCccccccccccCCCCCcEEEEEecCCCCCCHHHHHHHHHHhhccCC
Q 003726 537 GQIEDLLYDPKQNDEHVGILNDRSKPLIFSMARLDGVKNLTGLVECYGKSSKLRE 591 (800)
Q Consensus 537 ~~~~~~l~~~~~~~~~~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~l~~~~~ 591 (800)
+.-....+...|+ ......+..+-|+.+.||++.+++++..+....+
T Consensus 257 ------~~~~~~~r~~~~v--~~~d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~ 303 (495)
T KOG0853|consen 257 ------LELRLPVRLYRGV--SGIDRFFPSINRFEPGKDQDLALPAFTLLHDSIP 303 (495)
T ss_pred ------hhcccccceeeee--cccceEeeeeeecCCCCCceeehhhHHhhhcccC
Confidence 0111233344555 4556788899999999999999999988765443
No 184
>PF03401 TctC: Tripartite tricarboxylate transporter family receptor; InterPro: IPR005064 Bordetella pertussis, the causative agent of human whooping cough (pertussis), is an obligate human pathogen with diverse high-affinity transport systems for the assimilation of iron, a biometal that is essential for growth []. Periplasmic binding proteins of a new family, particularly well represented in this organism (and more generally in beta-proteobacteria), have been called Bug receptors []. They adopt a characteristic Venus flytrap fold with two globular domains bisected by a ligand-binding cleft. The family is specific for carboxylated solutes, with a characteristic mode of binding involving two highly conserved beta strand-beta turn-alpha helix motifs originating from each domain. These two motifs form hydrogen bonds with a carboxylate group of the ligand, both directly and via conserved water molecules, and have thus been termed the carboxylate pincers. Domain 1 recognises the ligand and the carboxylate group serves as an initial anchoring point. Domain 2 discriminates between productively and non-productively bound ligands as proper interactions with this domain is needed for the of the closed conformation []. BugE has a glutamate bound ligand. No charged residues are involved in glutamate binding by BugE, unlike what has been described for all glutamate receptors reported so far. The Bug architecture is highly conserved despite limited sequence identity [].; GO: 0030288 outer membrane-bounded periplasmic space; PDB: 2QPQ_C 2DVZ_A 2F5X_A.
Probab=75.48 E-value=23 Score=38.16 Aligned_cols=150 Identities=17% Similarity=0.218 Sum_probs=83.1
Q ss_pred CcEEEEEecCCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEcccccC
Q 003726 561 KPLIFSMARLDGVKNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISAQMN 640 (800)
Q Consensus 561 k~iIl~vGRL~~~Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~~~~ 640 (800)
.+.++.++.=.+.|+++.|++++++.+. .+++-..|.|.. + .=.+..+.++.|+ ++.++++...
T Consensus 78 ~~~vl~v~~dsp~~t~~eli~~ak~~p~---~~~~g~~g~g~~-----~------hl~~~~l~~~~G~--~~~~Vpy~G~ 141 (274)
T PF03401_consen 78 DPNVLVVRADSPYKTLEELIEYAKANPG---KLTFGSSGPGSS-----D------HLAAALLAKAAGI--KFTHVPYDGG 141 (274)
T ss_dssp EEEEEEEETTSS-SSHHHHHHHHHCSCC---C-EEEESSTTSH-----H------HHHHHHHHHHHT-----EEEE-SSH
T ss_pred cceEEEEeCCCccccHHHHHHHHHhCCC---CeEEEecCCCch-----H------HHHHHHHHHHhCC--ceEEEEeCCc
Confidence 3567777777789999999999987543 244444333322 0 1134455677776 3444543222
Q ss_pred ccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcC------------------CcEEEcCccccccccccCceEEEE
Q 003726 641 RVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCG------------------LPTFATCHGGPAEIIEHGVSGFHI 702 (800)
Q Consensus 641 ~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~G------------------lPVIAT~~GG~~EiI~dg~~G~lv 702 (800)
.+.+..++....|+.+... -........| +|++.. . |..++.-..-.|+.+
T Consensus 142 ---~~~~~allgG~vd~~~~~~------~~~~~~~~~G~~k~Lav~~~~r~~~~pdvPT~~E-~-G~~d~~~~~~~g~~~ 210 (274)
T PF03401_consen 142 ---AEALTALLGGHVDAAFGSP------GEALPYVEAGDLKPLAVFSDERSPALPDVPTFKE-Q-GYPDIVFGSWRGLFA 210 (274)
T ss_dssp ---HHHHHHHHTTSSSEEEEEH------HHHHHHHHTTSEEEEEECSSS-BTTCTTS-BTTT-T-T-TTG--EEEEEEEE
T ss_pred ---cHHHHHHhCCeeeEEeecH------HHHHHHHhCCCceEEEEecCccccccCCCCCHHH-h-Cccceeeeeeeeeec
Confidence 3455555655566654320 0112222222 333321 1 233444445578999
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 003726 703 DPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLK 737 (800)
Q Consensus 703 ~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~ 737 (800)
+++-+++..+++.+++.+..+||+..+.+.+.+..
T Consensus 211 p~gtp~~~~~~l~~a~~~~~~~pe~~~~~~~~g~~ 245 (274)
T PF03401_consen 211 PKGTPDEIVDKLADAIKKALEDPEFQEFLEKMGLE 245 (274)
T ss_dssp ETTS-HHHHHHHHHHHHHHHT-HHHHHHHHHHTEE
T ss_pred CCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHCCCc
Confidence 99999999999999999999999987777666554
No 185
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=75.00 E-value=2.1 Score=40.40 Aligned_cols=28 Identities=25% Similarity=0.347 Sum_probs=21.5
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHCCCccccceeEEeCC
Q 003726 290 TGGQVVYILDQVRALENEMLLRIQNQGLDVIPKILIVTRL 329 (800)
Q Consensus 290 tGG~~vyild~araL~~eLa~~L~~~GheV~~~i~VvTr~ 329 (800)
|+|-..-.+ .|+++|+++||+|. +.|..
T Consensus 8 t~Ghv~P~l--------ala~~L~~rGh~V~----~~~~~ 35 (139)
T PF03033_consen 8 TRGHVYPFL--------ALARALRRRGHEVR----LATPP 35 (139)
T ss_dssp SHHHHHHHH--------HHHHHHHHTT-EEE----EEETG
T ss_pred ChhHHHHHH--------HHHHHHhccCCeEE----Eeecc
Confidence 578777777 67777899999998 88764
No 186
>PLN02207 UDP-glycosyltransferase
Probab=73.95 E-value=1.1e+02 Score=35.87 Aligned_cols=78 Identities=14% Similarity=0.109 Sum_probs=49.2
Q ss_pred CcEEEcccccCccChHHHHHHHHccCcEEEecCCCCCCc-HHHHHHHHcCCcEEEcC----cccccccccc-CceEEEEC
Q 003726 630 GQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFG-LTVVEAMTCGLPTFATC----HGGPAEIIEH-GVSGFHID 703 (800)
Q Consensus 630 ~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fG-l~vlEAMA~GlPVIAT~----~GG~~EiI~d-g~~G~lv~ 703 (800)
+++...+ +.+..++...= +.++||. .+| ++++||+.+|+|+|+-. .......+.+ -+.|.-+.
T Consensus 332 ~~g~i~~----W~PQ~~IL~H~--~vg~FvT-----H~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~ 400 (468)
T PLN02207 332 GRGMICG----WSPQVEILAHK--AVGGFVS-----HCGWNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELK 400 (468)
T ss_pred CCeEEEE----eCCHHHHhccc--ccceeee-----cCccccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEe
Confidence 4555555 66677777642 2444554 233 47899999999999973 3344554433 45666331
Q ss_pred ---------CCCHHHHHHHHHHHH
Q 003726 704 ---------PYHPDQVAELMIEFF 718 (800)
Q Consensus 704 ---------p~d~e~lA~aI~~~l 718 (800)
.-+.++++++|.+++
T Consensus 401 ~~~~~~~~~~v~~e~i~~av~~vm 424 (468)
T PLN02207 401 LDYRVHSDEIVNANEIETAIRCVM 424 (468)
T ss_pred cccccccCCcccHHHHHHHHHHHH
Confidence 226788999998877
No 187
>PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes. It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important.
Probab=73.76 E-value=15 Score=36.62 Aligned_cols=108 Identities=15% Similarity=0.102 Sum_probs=56.1
Q ss_pred CCceEEEECCCCc-hHHHHHHHhcCCCeEEEEecCCccccCCCChhhHHhhhhhhccchhhhHHHHHhccCCEEEecCHH
Q 003726 395 GVPDLIIGNYSDG-NLVATLLSYKLGVTQCNIAHALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNNADFIITSTYQ 473 (800)
Q Consensus 395 ~~PDIIh~h~~~~-~lva~lla~~~gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 473 (800)
..+|+|.+.+-.. +-.-.+.....++|.++-+|.-.. .||.+...-+++...+ ......-.||.|+..|.-
T Consensus 58 ~~~dll~aTsmldLa~l~gL~p~l~~~p~ilYFHENQl-~YP~~~~~~rd~~~~~-------~ni~saLaAD~v~FNS~~ 129 (168)
T PF12038_consen 58 HSYDLLFATSMLDLATLRGLRPDLANVPKILYFHENQL-AYPVSPGQERDFQYGM-------NNIYSALAADRVVFNSAF 129 (168)
T ss_pred cCCCEEEeeccccHHHHHhhccCCCCCCEEEEEecCcc-cCCCCCCccccccHHH-------HHHHHHHhceeeeecchh
Confidence 4679999875432 222222334456999999997533 3555443222222211 123355589999999985
Q ss_pred HHhhcccCccccccccccccccce--eeeccCCCCCCceEEecCCC
Q 003726 474 EIAGSKNNVGQYENHTAFTLPGLY--RVVHGIDVFDPKFNIVSPGA 517 (800)
Q Consensus 474 ei~~~~~~~gqy~~~~~f~~p~l~--~vv~Gi~v~~~k~~VIpnGv 517 (800)
..+..-+.+.++-+ .||... ..+..| .+|..|+|.|+
T Consensus 130 nr~sFL~~~~~fL~----~~PD~~p~~~~~~I---~~Ks~VL~~pi 168 (168)
T PF12038_consen 130 NRDSFLDGIPSFLK----RMPDHRPKGLVERI---RAKSQVLPVPI 168 (168)
T ss_pred hHHHHHHHHHHHHH----HCCCCCchhHHHHH---hccCeecCCCC
Confidence 44433333222211 223221 112222 46788888764
No 188
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=73.50 E-value=22 Score=39.47 Aligned_cols=99 Identities=17% Similarity=0.134 Sum_probs=68.4
Q ss_pred CcEEEEEe-cCCCCCCHH--HHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEccc
Q 003726 561 KPLIFSMA-RLDGVKNLT--GLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISA 637 (800)
Q Consensus 561 k~iIl~vG-RL~~~Kgl~--~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~ 637 (800)
+.+++..| .-...|+.+ ...+.+..+.+.. .++++.|+..+ .+...++.+.++ +.+.+.|
T Consensus 176 ~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~--~~Vvl~g~~~e------------~e~~~~i~~~~~--~~~~l~~- 238 (334)
T COG0859 176 PYIVINPGASRGSAKRWPLEHYAELAELLIAKG--YQVVLFGGPDE------------EERAEEIAKGLP--NAVILAG- 238 (334)
T ss_pred CeEEEeccccccccCCCCHHHHHHHHHHHHHCC--CEEEEecChHH------------HHHHHHHHHhcC--CccccCC-
Confidence 45666777 555666654 6667777766654 89999999843 455556666664 2333665
Q ss_pred ccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcC
Q 003726 638 QMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATC 685 (800)
Q Consensus 638 ~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~ 685 (800)
..+-.++...++. ||++|.+. .|. +-=|-|.|+|+|+--
T Consensus 239 ---k~sL~e~~~li~~-a~l~I~~D----Sg~-~HlAaA~~~P~I~iy 277 (334)
T COG0859 239 ---KTSLEELAALIAG-ADLVIGND----SGP-MHLAAALGTPTIALY 277 (334)
T ss_pred ---CCCHHHHHHHHhc-CCEEEccC----ChH-HHHHHHcCCCEEEEE
Confidence 7778999999996 99998873 233 344778999999974
No 189
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=73.45 E-value=18 Score=35.78 Aligned_cols=66 Identities=14% Similarity=0.090 Sum_probs=38.9
Q ss_pred HHHHHHHHhCCCceEEEECCCCchHH-HH-HHHhc-C-CCeEEEEecCCcc-ccCCCChhhHHhhhhhhccchhhhHHHH
Q 003726 385 ASNEIAAELQGVPDLIIGNYSDGNLV-AT-LLSYK-L-GVTQCNIAHALEK-TKYPDSDLYWRKFEEKYHFSSQFTADLT 459 (800)
Q Consensus 385 ~~~~ll~~~~~~PDIIh~h~~~~~lv-a~-lla~~-~-gip~v~t~H~l~~-~~~~~s~~~~~~~~~~y~f~~~~~~e~~ 459 (800)
.+.++++ +.+||+|+|.++..+.+ .. +-++. . .+|+++.+-++.. .. .+
T Consensus 80 ~l~~~l~--~~~PD~IIsThp~~~~~~l~~lk~~~~~~~~p~~tvvTD~~~~H~------------------------~W 133 (169)
T PF06925_consen 80 RLIRLLR--EFQPDLIISTHPFPAQVPLSRLKRRGRLPNIPVVTVVTDFDTVHP------------------------FW 133 (169)
T ss_pred HHHHHHh--hcCCCEEEECCcchhhhHHHHHHHhhcccCCcEEEEEcCCCCCCc------------------------Ce
Confidence 3334444 45999999988875443 33 33333 3 4777655555321 11 11
Q ss_pred HhccCCEEEecCHHHHh
Q 003726 460 AMNNADFIITSTYQEIA 476 (800)
Q Consensus 460 a~~~AD~IIt~S~~ei~ 476 (800)
.-..+|..++.|++..+
T Consensus 134 ~~~~~D~y~Vase~~~~ 150 (169)
T PF06925_consen 134 IHPGVDRYFVASEEVKE 150 (169)
T ss_pred ecCCCCEEEECCHHHHH
Confidence 34589999999987665
No 190
>PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes. It is typically between 259 to 282 amino acids in length. This region is found N-terminal PF00534 from PFAM. There are two conserved sequence motifs: GGVS and EHGIY.
Probab=72.76 E-value=3.4 Score=44.55 Aligned_cols=79 Identities=14% Similarity=0.077 Sum_probs=48.2
Q ss_pred CCceEEEECCCC-chHHHHHHHhcCCCeEEEEecCCccccCC--CChhhHH---hhhhhhccchhhhHHHHHhccCCEEE
Q 003726 395 GVPDLIIGNYSD-GNLVATLLSYKLGVTQCNIAHALEKTKYP--DSDLYWR---KFEEKYHFSSQFTADLTAMNNADFII 468 (800)
Q Consensus 395 ~~PDIIh~h~~~-~~lva~lla~~~gip~v~t~H~l~~~~~~--~s~~~~~---~~~~~y~f~~~~~~e~~a~~~AD~II 468 (800)
.+.||+|+.... ++++|++++.+.|+|++.|=|+....... -....|- ...+.......-..-+.++..||.|+
T Consensus 171 P~advyHsvstGyAgl~g~~~k~~~g~P~lLTEHGIY~RER~~ei~~a~w~~~~~~~r~~wi~~f~~l~~~~Y~~Ad~I~ 250 (268)
T PF11997_consen 171 PKADVYHSVSTGYAGLLGALAKYRYGRPFLLTEHGIYTREREIEILQADWIWESPYVRDLWIRFFESLSRLAYRAADRIT 250 (268)
T ss_pred CCCCEEecCCccHHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhhCeec
Confidence 467999976654 58999999999999999999996321100 0000111 11111111111123456899999999
Q ss_pred ecCHH
Q 003726 469 TSTYQ 473 (800)
Q Consensus 469 t~S~~ 473 (800)
+.+..
T Consensus 251 ~l~~~ 255 (268)
T PF11997_consen 251 PLYEY 255 (268)
T ss_pred ccchh
Confidence 99874
No 191
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=72.26 E-value=32 Score=37.53 Aligned_cols=100 Identities=14% Similarity=0.052 Sum_probs=62.9
Q ss_pred CCcEEEEEecCCCCCCH--HHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEccc
Q 003726 560 SKPLIFSMARLDGVKNL--TGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISA 637 (800)
Q Consensus 560 ~k~iIl~vGRL~~~Kgl--~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~ 637 (800)
++.+++..|.=.+.|.. +...+.+..+.+. +.+++++|+++. +.+...++.+..+ +..+.|
T Consensus 179 ~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~--~~~~vl~~g~~~-----------e~~~~~~i~~~~~---~~~l~g- 241 (319)
T TIGR02193 179 APYAVLLHATSRDDKTWPEERWRELARLLLAR--GLQIVLPWGNDA-----------EKQRAERIAEALP---GAVVLP- 241 (319)
T ss_pred CCEEEEEeCCCcccCCCCHHHHHHHHHHHHHC--CCeEEEeCCCHH-----------HHHHHHHHHhhCC---CCeecC-
Confidence 34456666654455655 4666766666542 678888866543 1233344444332 235566
Q ss_pred ccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcC
Q 003726 638 QMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATC 685 (800)
Q Consensus 638 ~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~ 685 (800)
..+-.++...++. |+++|.. ++ |. +==|-|.|+|+|+--
T Consensus 242 ---~~sL~el~ali~~-a~l~I~~---DS-gp-~HlAaa~g~P~i~lf 280 (319)
T TIGR02193 242 ---KMSLAEVAALLAG-ADAVVGV---DT-GL-THLAAALDKPTVTLY 280 (319)
T ss_pred ---CCCHHHHHHHHHc-CCEEEeC---CC-hH-HHHHHHcCCCEEEEE
Confidence 5678999999997 9999987 22 22 334668899999863
No 192
>PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [].
Probab=72.04 E-value=12 Score=37.51 Aligned_cols=63 Identities=22% Similarity=0.131 Sum_probs=42.2
Q ss_pred CCceEEEECCCCchHHHHHHHhcC------CCeEEEEecCCccccCCCChhhHHhhhhhhccchhhhHHHHHhccCCEEE
Q 003726 395 GVPDLIIGNYSDGNLVATLLSYKL------GVTQCNIAHALEKTKYPDSDLYWRKFEEKYHFSSQFTADLTAMNNADFII 468 (800)
Q Consensus 395 ~~PDIIh~h~~~~~lva~lla~~~------gip~v~t~H~l~~~~~~~s~~~~~~~~~~y~f~~~~~~e~~a~~~AD~II 468 (800)
.+||+|++|.+..+....++++.+ |.++|++- +....+-+ + ..-++++.-||..+
T Consensus 91 ~rPdvii~nGpg~~vp~~~~~~l~~~~~~~~~kiIyIE-S~aRv~~l---------------S---lTGklly~~aD~f~ 151 (170)
T PF08660_consen 91 ERPDVIISNGPGTCVPVCLAAKLLRLLGLRGSKIIYIE-SFARVKTL---------------S---LTGKLLYPFADRFI 151 (170)
T ss_pred hCCCEEEEcCCceeeHHHHHHHHHHHhhccCCcEEEEE-eeeecCCC---------------c---hHHHHHHHhCCEEE
Confidence 389999999999988888888888 88877641 11111100 0 01244666799999
Q ss_pred ecCHHHHh
Q 003726 469 TSTYQEIA 476 (800)
Q Consensus 469 t~S~~ei~ 476 (800)
+--++.++
T Consensus 152 VQW~~l~~ 159 (170)
T PF08660_consen 152 VQWEELAE 159 (170)
T ss_pred EcCHHHHh
Confidence 98876554
No 193
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=70.22 E-value=45 Score=36.85 Aligned_cols=102 Identities=11% Similarity=0.050 Sum_probs=62.0
Q ss_pred CcEEEEEecCCCCCC--HHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEcccc
Q 003726 561 KPLIFSMARLDGVKN--LTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISAQ 638 (800)
Q Consensus 561 k~iIl~vGRL~~~Kg--l~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~~ 638 (800)
..+++..|.-.+.|. .+...+.+..+.+ .+.+++++|+..+ ++.+...++.+..+-...+.+.|
T Consensus 182 ~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~--~~~~ivl~g~p~~----------~e~~~~~~i~~~~~~~~~~~l~g-- 247 (344)
T TIGR02201 182 NYIVIQPTSRWFFKCWDNDRFSALIDALHA--RGYEVVLTSGPDK----------DELAMVNEIAQGCQTPRVTSLAG-- 247 (344)
T ss_pred CEEEEeCCCCccccCCCHHHHHHHHHHHHh--CCCeEEEecCCCH----------HHHHHHHHHHhhCCCCcccccCC--
Confidence 345556665444454 4566666666644 3578899987532 11222333333333222344566
Q ss_pred cCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEc
Q 003726 639 MNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFAT 684 (800)
Q Consensus 639 ~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT 684 (800)
..+-.++..+++. ++++|-. ++ | .+==|-|.|+|+|+=
T Consensus 248 --~~sL~el~ali~~-a~l~Vs~---DS-G-p~HlAaA~g~p~v~L 285 (344)
T TIGR02201 248 --KLTLPQLAALIDH-ARLFIGV---DS-V-PMHMAAALGTPLVAL 285 (344)
T ss_pred --CCCHHHHHHHHHh-CCEEEec---CC-H-HHHHHHHcCCCEEEE
Confidence 6678999999997 9999987 22 2 244578899999986
No 194
>PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family. This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A ....
Probab=69.66 E-value=37 Score=34.89 Aligned_cols=39 Identities=15% Similarity=0.214 Sum_probs=26.4
Q ss_pred eEEEEEccCcCCCCccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCC
Q 003726 268 FNVVIVSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIQNQGLDVIPKILIVTRLIPD 332 (800)
Q Consensus 268 ~rI~ivs~hg~~~~~~~lg~p~tGG~~vyild~araL~~eLa~~L~~~GheV~~~i~VvTr~~p~ 332 (800)
|||++.+..|+-. ..+. .|++.|++.||+|. |++.....
T Consensus 1 M~ILlTNDDGi~a--------------~Gi~--------aL~~~L~~~g~~V~----VvAP~~~~ 39 (196)
T PF01975_consen 1 MRILLTNDDGIDA--------------PGIR--------ALAKALSALGHDVV----VVAPDSEQ 39 (196)
T ss_dssp SEEEEE-SS-TTS--------------HHHH--------HHHHHHTTTSSEEE----EEEESSST
T ss_pred CeEEEEcCCCCCC--------------HHHH--------HHHHHHHhcCCeEE----EEeCCCCC
Confidence 8999999888732 2334 45666777789999 99877543
No 195
>PF10933 DUF2827: Protein of unknown function (DUF2827); InterPro: IPR021234 This is a family of uncharacterised proteins found in Burkholderia.
Probab=68.09 E-value=41 Score=37.66 Aligned_cols=151 Identities=13% Similarity=0.199 Sum_probs=100.6
Q ss_pred CCcEEEEEecCCCCCCHHH---HHH-HHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCC--CCcEE
Q 003726 560 SKPLIFSMARLDGVKNLTG---LVE-CYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNL--HGQFR 633 (800)
Q Consensus 560 ~k~iIl~vGRL~~~Kgl~~---Lle-A~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL--~~~V~ 633 (800)
.+.+-+|=-+++-.|+.-. +.| |+..-+ ..+..+.|-.... ..+-..+..++..+.+ +++..
T Consensus 189 ~~RvavfEPNi~vvK~~~~PmLi~E~aYR~~P---~~v~~~~V~Nt~~---------~ke~~~F~~f~~~ldlvr~gkas 256 (364)
T PF10933_consen 189 GKRVAVFEPNISVVKTCFIPMLICEEAYRADP---DAVEHVYVTNTYH---------LKEHPTFVNFANSLDLVRDGKAS 256 (364)
T ss_pred CceEEEecCCceEEeecCccHHHHHHHHHhCh---hhcceEEEecchh---------hhcCHHHHHHHHhhHHhhcCeeE
Confidence 3444455556666776432 233 333222 2366666666544 1223456666666655 57889
Q ss_pred EcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHH
Q 003726 634 WISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVAEL 713 (800)
Q Consensus 634 flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~~GG~~EiI~dg~~G~lv~p~d~e~lA~a 713 (800)
|.| + -+++.+++...|++|.=...-+.-..-.||+--|=|.|-.. ..+. ..|+..+..|..+=+++
T Consensus 257 feg----R---~~~p~fla~~tD~VvSHqWeN~lNYlY~daLyggYPLVHNS-----~~l~--d~GYYY~~fD~~~G~r~ 322 (364)
T PF10933_consen 257 FEG----R---FDFPDFLAQHTDAVVSHQWENPLNYLYYDALYGGYPLVHNS-----PLLK--DVGYYYPDFDAFEGARQ 322 (364)
T ss_pred Eee----e---cChHHHHHhCCCEEEeccccchhhHHHHHHHhcCCCcccCc-----chhc--ccCcCCCCccHHHHHHH
Confidence 988 3 35777888888888876665567778899999999998643 3342 38999999999999999
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHH
Q 003726 714 MIEFFEKCYNDPSHWNKISDGGLKRI 739 (800)
Q Consensus 714 I~~~l~~l~~dp~~~~~ms~~a~~~v 739 (800)
+.+++. ...+.++...+++++.+
T Consensus 323 L~~A~~---~HD~~~~~Y~~ra~~~l 345 (364)
T PF10933_consen 323 LLRAIR---EHDADLDAYRARARRLL 345 (364)
T ss_pred HHHHHH---HccccHHHHHHHHHHHH
Confidence 998885 45555667777777655
No 196
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=67.35 E-value=1.7e+02 Score=30.81 Aligned_cols=127 Identities=6% Similarity=-0.040 Sum_probs=68.7
Q ss_pred CCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEcccccCccChHHHHHHHHccCcEEEecCCCCCCc-H
Q 003726 591 ELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFG-L 669 (800)
Q Consensus 591 ~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fG-l 669 (800)
-.+++.+|..... +++..+++ .++|+|.-. ....+++ . .+++.+..+--+... .
T Consensus 47 ~gA~VtVVap~i~-------------~el~~l~~----~~~i~~~~r---~~~~~dl----~-g~~LViaATdD~~vN~~ 101 (223)
T PRK05562 47 KGCYVYILSKKFS-------------KEFLDLKK----YGNLKLIKG---NYDKEFI----K-DKHLIVIATDDEKLNNK 101 (223)
T ss_pred CCCEEEEEcCCCC-------------HHHHHHHh----CCCEEEEeC---CCChHHh----C-CCcEEEECCCCHHHHHH
Confidence 3577788876655 34444443 356888751 2222332 3 355555444433333 3
Q ss_pred HHHHHHHcCCcEEEcCccccccc-----cccCceEEEEC-CCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh
Q 003726 670 TVVEAMTCGLPTFATCHGGPAEI-----IEHGVSGFHID-PYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYER 742 (800)
Q Consensus 670 ~vlEAMA~GlPVIAT~~GG~~Ei-----I~dg~~G~lv~-p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ 742 (800)
..-+|.+.|.+|...+.....+. +..|.--+.|. -+..-.+|..|.+-++.++.+-+.+-+.....|..+.++
T Consensus 102 I~~~a~~~~~lvn~vd~p~~~dFi~PAiv~rg~l~IaIST~G~sP~lar~lR~~ie~~l~~~~~l~~~l~~~R~~vk~~ 180 (223)
T PRK05562 102 IRKHCDRLYKLYIDCSDYKKGLCIIPYQRSTKNFVFALNTKGGSPKTSVFIGEKVKNFLKKYDDFIEYVTKIRNKAKKN 180 (223)
T ss_pred HHHHHHHcCCeEEEcCCcccCeEEeeeEEecCCEEEEEECCCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 44566788999988765544433 33333333332 233346677777666666544455555666666666554
No 197
>COG1618 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=65.98 E-value=1.4e+02 Score=30.06 Aligned_cols=125 Identities=23% Similarity=0.260 Sum_probs=63.8
Q ss_pred CCceeEEEEEccCcCCCCccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCcccccce
Q 003726 264 IPMVFNVVIVSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIQNQGLDVIPKILIVTRLIPDAKGTTCNQRLE 343 (800)
Q Consensus 264 ~p~~~rI~ivs~hg~~~~~~~lg~p~tGG~~vyild~araL~~eLa~~L~~~GheV~~~i~VvTr~~p~~~g~~~~~~~e 343 (800)
++|.|||.|-. .|.+ |-...+. .+++.|.+.|+.|- =++|.... ..|...+....
T Consensus 2 ~~~~mki~ITG------------~PGv-GKtTl~~--------ki~e~L~~~g~kvg---Gf~t~EVR-~gGkR~GF~Iv 56 (179)
T COG1618 2 IKMAMKIFITG------------RPGV-GKTTLVL--------KIAEKLREKGYKVG---GFITPEVR-EGGKRIGFKIV 56 (179)
T ss_pred CCcceEEEEeC------------CCCc-cHHHHHH--------HHHHHHHhcCceee---eEEeeeee-cCCeEeeeEEE
Confidence 57889997753 2333 5666666 78888999999876 13333322 22333333333
Q ss_pred eecCCCCeEEEEeccCCCCccccccccccCChhh------HHHHHHHHHHHHHHHhCCCceEEEECCCCc-----h--HH
Q 003726 344 RISGTEHTHILRVPFRTENGILRKWISRFDVWPY------LETFAEDASNEIAAELQGVPDLIIGNYSDG-----N--LV 410 (800)
Q Consensus 344 ~~~g~~~v~I~rvp~~~~~~~~~~~isr~~i~~y------l~~f~~~~~~~ll~~~~~~PDIIh~h~~~~-----~--lv 410 (800)
.+...+..+.-++-+ ++..+-.| ++..+..+++..++ ..|+|+..---. . .-
T Consensus 57 dl~tg~~~~la~~~~-----------~~~rvGkY~V~v~~le~i~~~al~rA~~----~aDvIIIDEIGpMElks~~f~~ 121 (179)
T COG1618 57 DLATGEEGILARVGF-----------SRPRVGKYGVNVEGLEEIAIPALRRALE----EADVIIIDEIGPMELKSKKFRE 121 (179)
T ss_pred EccCCceEEEEEcCC-----------CCcccceEEeeHHHHHHHhHHHHHHHhh----cCCEEEEecccchhhccHHHHH
Confidence 333222233333333 22222222 34444444444333 469988754221 1 11
Q ss_pred HHHHHhcCCCeEEEEecC
Q 003726 411 ATLLSYKLGVTQCNIAHA 428 (800)
Q Consensus 411 a~lla~~~gip~v~t~H~ 428 (800)
+.--....+.|++.|+|-
T Consensus 122 ~ve~vl~~~kpliatlHr 139 (179)
T COG1618 122 AVEEVLKSGKPLIATLHR 139 (179)
T ss_pred HHHHHhcCCCcEEEEEec
Confidence 222223357899999995
No 198
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=63.75 E-value=51 Score=36.05 Aligned_cols=97 Identities=14% Similarity=0.119 Sum_probs=59.4
Q ss_pred EEEEEecCCCCCCH--HHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEcccccC
Q 003726 563 LIFSMARLDGVKNL--TGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISAQMN 640 (800)
Q Consensus 563 iIl~vGRL~~~Kgl--~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~~~~ 640 (800)
+++..|.-...|.. +...+.+..+.+ .+.++++.||++. +.+...++.+.. ..+...|
T Consensus 181 i~~~~~~s~~~k~Wp~e~~a~li~~l~~--~~~~ivl~~G~~~-----------e~~~~~~i~~~~---~~~~l~g---- 240 (322)
T PRK10964 181 LVFLHATTRDDKHWPEAHWRELIGLLAP--SGLRIKLPWGAEH-----------EEQRAKRLAEGF---PYVEVLP---- 240 (322)
T ss_pred EEEEeCCCcccccCCHHHHHHHHHHHHH--CCCeEEEeCCCHH-----------HHHHHHHHHccC---CcceecC----
Confidence 33444433344543 466777776654 2567777654433 122333333322 3466676
Q ss_pred ccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcC
Q 003726 641 RVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATC 685 (800)
Q Consensus 641 ~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~ 685 (800)
..+-.++...++. ||++|..-. | .+-=|-|+|+|+|+--
T Consensus 241 ~~sL~elaali~~-a~l~I~nDS----G-p~HlA~A~g~p~valf 279 (322)
T PRK10964 241 KLSLEQVARVLAG-AKAVVSVDT----G-LSHLTAALDRPNITLY 279 (322)
T ss_pred CCCHHHHHHHHHh-CCEEEecCC----c-HHHHHHHhCCCEEEEE
Confidence 5678999999996 999998622 2 2455789999999863
No 199
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=62.65 E-value=1.1e+02 Score=36.82 Aligned_cols=187 Identities=13% Similarity=0.110 Sum_probs=114.8
Q ss_pred cccccccCCCCCcEEEEEecCCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCC
Q 003726 550 DEHVGILNDRSKPLIFSMARLDGVKNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLH 629 (800)
Q Consensus 550 ~~~~Gll~~~~k~iIl~vGRL~~~Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~ 629 (800)
+..+|+ +++..++...-.| .|=-...++.+.++.+.-|+-.|++.--..- ....++..+++.|++
T Consensus 750 r~~y~L--p~d~vvf~~FNqL--yKidP~~l~~W~~ILk~VPnS~LwllrfPa~-----------ge~rf~ty~~~~Gl~ 814 (966)
T KOG4626|consen 750 RSQYGL--PEDAVVFCNFNQL--YKIDPSTLQMWANILKRVPNSVLWLLRFPAV-----------GEQRFRTYAEQLGLE 814 (966)
T ss_pred CCCCCC--CCCeEEEeechhh--hcCCHHHHHHHHHHHHhCCcceeEEEecccc-----------chHHHHHHHHHhCCC
Confidence 355777 5666555555444 3444566777777777778777776544322 135788999999995
Q ss_pred -CcEEEcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcCcccccc-----ccccCceEEEEC
Q 003726 630 -GQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAE-----IIEHGVSGFHID 703 (800)
Q Consensus 630 -~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~~GG~~E-----iI~dg~~G~lv~ 703 (800)
++|.|... ...+|-.+-..- +||.+-+..+-|. .|-+|.+-+|+|+|.-...-.+. ....-+.|-+|
T Consensus 815 p~riifs~v----a~k~eHvrr~~L-aDv~LDTplcnGh-TTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~~Gl~hli- 887 (966)
T KOG4626|consen 815 PDRIIFSPV----AAKEEHVRRGQL-ADVCLDTPLCNGH-TTGMDVLWAGVPMVTMPGETLASRVAASLLTALGLGHLI- 887 (966)
T ss_pred ccceeeccc----cchHHHHHhhhh-hhhcccCcCcCCc-ccchhhhccCCceeecccHHHHHHHHHHHHHHcccHHHH-
Confidence 78888863 333555555553 7888876665443 34578889999998643211111 11112233334
Q ss_pred CCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH--HHhCCHHHHHHHHHHHHHHhhhhhh
Q 003726 704 PYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRI--YERYTWKIYSERLLTLAGVYGFWKY 764 (800)
Q Consensus 704 p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v--~~~ysw~~~a~~ll~ly~~~~~~~~ 764 (800)
..+-++..+.-.++ ..|.+..+++...-+..- .--|+-..++..++.+|.. -|+.
T Consensus 888 ak~~eEY~~iaV~L----atd~~~L~~lr~~l~~~r~~splfd~~q~~~~LE~~y~~--MW~~ 944 (966)
T KOG4626|consen 888 AKNREEYVQIAVRL----ATDKEYLKKLRAKLRKARASSPLFDTKQYAKGLERLYLQ--MWKK 944 (966)
T ss_pred hhhHHHHHHHHHHh----hcCHHHHHHHHHHHHHHhcCCCccCchHHHHHHHHHHHH--HHHH
Confidence 23556665555443 378888877766555432 2358899999999999875 5765
No 200
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=60.07 E-value=77 Score=35.12 Aligned_cols=99 Identities=17% Similarity=0.083 Sum_probs=60.0
Q ss_pred cEEEEEec-CCCCCC--HHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCC--CCc-EEEc
Q 003726 562 PLIFSMAR-LDGVKN--LTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNL--HGQ-FRWI 635 (800)
Q Consensus 562 ~iIl~vGR-L~~~Kg--l~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL--~~~-V~fl 635 (800)
.+++..|. ..+.|. .+.+.+.+..+.+ .+++++++|+..+ .+...++.+..+- ..+ +.+.
T Consensus 182 ~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~--~~~~vvl~Gg~~e------------~~~~~~i~~~~~~~~~~~~~~l~ 247 (348)
T PRK10916 182 IIGFCPGAEFGPAKRWPHYHYAELAQQLID--EGYQVVLFGSAKD------------HEAGNEILAALNTEQQAWCRNLA 247 (348)
T ss_pred EEEEeCCCCCccccCCCHHHHHHHHHHHHH--CCCeEEEEeCHHh------------HHHHHHHHHhcccccccceeecc
Confidence 34456654 334554 3456666666543 3678889987654 2233333333321 112 4455
Q ss_pred ccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEc
Q 003726 636 SAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFAT 684 (800)
Q Consensus 636 G~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT 684 (800)
| ..+-.++...++. ++++|-.- .|. +==|-|.|+|||+-
T Consensus 248 g----~~sL~el~ali~~-a~l~I~nD----TGp-~HlAaA~g~P~val 286 (348)
T PRK10916 248 G----ETQLEQAVILIAA-CKAIVTND----SGL-MHVAAALNRPLVAL 286 (348)
T ss_pred C----CCCHHHHHHHHHh-CCEEEecC----ChH-HHHHHHhCCCEEEE
Confidence 5 5678899999997 99999862 222 44578899999975
No 201
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=53.87 E-value=2.6e+02 Score=32.27 Aligned_cols=139 Identities=12% Similarity=0.114 Sum_probs=73.8
Q ss_pred CcEEEEEecCCC-----CCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcC--CCCcEE
Q 003726 561 KPLIFSMARLDG-----VKNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYN--LHGQFR 633 (800)
Q Consensus 561 k~iIl~vGRL~~-----~Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~g--L~~~V~ 633 (800)
.-++++.|.... .+-...++.+++++ +++.|+++=..... .. +.+... -.++|.
T Consensus 278 ~vvyvSfGS~~~~~~lp~~~~~~l~~~l~~~----~~~~FiW~~~~~~~------------~~---~~~~~~~~~~~nV~ 338 (496)
T KOG1192|consen 278 SVVYISFGSMVNSADLPEEQKKELAKALESL----QGVTFLWKYRPDDS------------IY---FPEGLPNRGRGNVV 338 (496)
T ss_pred CeEEEECCcccccccCCHHHHHHHHHHHHhC----CCceEEEEecCCcc------------hh---hhhcCCCCCcCceE
Confidence 456667777753 23344455555543 46777777665430 00 222221 135788
Q ss_pred EcccccCccChHHHHHHHHc-cCcEEEecCCCCCCcHHHHHHHHcCCcEEEc----Ccccccccccc-CceEEEEC--CC
Q 003726 634 WISAQMNRVRNGELYRYIAD-TRGVFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEH-GVSGFHID--PY 705 (800)
Q Consensus 634 flG~~~~~v~~~el~~~ia~-aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT----~~GG~~EiI~d-g~~G~lv~--p~ 705 (800)
..+ +++..++. ++. +.++||. .-|++ +++||..+|+|+|+. |..-.+..+.+ |..|.... -.
T Consensus 339 ~~~----W~PQ~~ll--l~H~~v~~FvT---HgG~n-St~E~~~~GvP~v~~Plf~DQ~~Na~~i~~~g~~~v~~~~~~~ 408 (496)
T KOG1192|consen 339 LSK----WAPQNDLL--LDHPAVGGFVT---HGGWN-STLESIYSGVPMVCVPLFGDQPLNARLLVRHGGGGVLDKRDLV 408 (496)
T ss_pred Eec----CCCcHHHh--cCCCcCcEEEE---CCccc-HHHHHHhcCCceecCCccccchhHHHHHHhCCCEEEEehhhcC
Confidence 776 56666755 111 1334442 12344 459999999999964 34445555544 44444432 12
Q ss_pred CHHHHHHHHHHHHHHhcCCHHHHHHHHH
Q 003726 706 HPDQVAELMIEFFEKCYNDPSHWNKISD 733 (800)
Q Consensus 706 d~e~lA~aI~~~l~~l~~dp~~~~~ms~ 733 (800)
+.+ +.+++..++ .++++.+...+
T Consensus 409 ~~~-~~~~~~~il----~~~~y~~~~~~ 431 (496)
T KOG1192|consen 409 SEE-LLEAIKEIL----ENEEYKEAAKR 431 (496)
T ss_pred cHH-HHHHHHHHH----cChHHHHHHHH
Confidence 333 566665555 67766554333
No 202
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=53.37 E-value=12 Score=38.21 Aligned_cols=33 Identities=21% Similarity=0.420 Sum_probs=26.4
Q ss_pred eEEEEEccCcCCCCccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHCCCccccceeEEeCC
Q 003726 268 FNVVIVSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIQNQGLDVIPKILIVTRL 329 (800)
Q Consensus 268 ~rI~ivs~hg~~~~~~~lg~p~tGG~~vyild~araL~~eLa~~L~~~GheV~~~i~VvTr~ 329 (800)
|||+||+..|..|. +++++..++||+|+ -++|.
T Consensus 1 mKIaiIgAsG~~Gs-------------------------~i~~EA~~RGHeVT----AivRn 33 (211)
T COG2910 1 MKIAIIGASGKAGS-------------------------RILKEALKRGHEVT----AIVRN 33 (211)
T ss_pred CeEEEEecCchhHH-------------------------HHHHHHHhCCCeeE----EEEeC
Confidence 79999998776431 56677899999999 88876
No 203
>COG1703 ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism]
Probab=52.01 E-value=2.5e+02 Score=30.98 Aligned_cols=110 Identities=15% Similarity=0.132 Sum_probs=61.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHCCCccccceeEEeCC--CCCCCCCcccc--cceeecCCCCeEEEEeccCCCCccccc
Q 003726 292 GQVVYILDQVRALENEMLLRIQNQGLDVIPKILIVTRL--IPDAKGTTCNQ--RLERISGTEHTHILRVPFRTENGILRK 367 (800)
Q Consensus 292 G~~vyild~araL~~eLa~~L~~~GheV~~~i~VvTr~--~p~~~g~~~~~--~~e~~~g~~~v~I~rvp~~~~~~~~~~ 367 (800)
|-...+. .|...|.++||.|- |++-. .|-..|.-.+. +.......+|+.|-.+|.+...|
T Consensus 63 GKSTli~--------~L~~~l~~~G~rVa----VlAVDPSSp~TGGsiLGDRiRM~~~~~~~~vFiRs~~srG~lG---- 126 (323)
T COG1703 63 GKSTLIE--------ALGRELRERGHRVA----VLAVDPSSPFTGGSILGDRIRMQRLAVDPGVFIRSSPSRGTLG---- 126 (323)
T ss_pred chHHHHH--------HHHHHHHHCCcEEE----EEEECCCCCCCCccccccHhhHHhhccCCCeEEeecCCCccch----
Confidence 6677777 67778899999998 55544 33333332222 33444445677887777765432
Q ss_pred cccccCChhhHHHHHHHHHHHHHHHhCCCceEEEECCCCchHHHHHHHhcCCCeEEEEecCC
Q 003726 368 WISRFDVWPYLETFAEDASNEIAAELQGVPDLIIGNYSDGNLVATLLSYKLGVTQCNIAHAL 429 (800)
Q Consensus 368 ~isr~~i~~yl~~f~~~~~~~ll~~~~~~PDIIh~h~~~~~lva~lla~~~gip~v~t~H~l 429 (800)
-+..-..++.. ++. ...+|+|+....-.+-.=.-++....+-++++....
T Consensus 127 ---------GlS~at~~~i~-~ld--AaG~DvIIVETVGvGQsev~I~~~aDt~~~v~~pg~ 176 (323)
T COG1703 127 ---------GLSRATREAIK-LLD--AAGYDVIIVETVGVGQSEVDIANMADTFLVVMIPGA 176 (323)
T ss_pred ---------hhhHHHHHHHH-HHH--hcCCCEEEEEecCCCcchhHHhhhcceEEEEecCCC
Confidence 12122222222 222 348999998775543333334455556666666654
No 204
>PF15024 Glyco_transf_18: Glycosyltransferase family 18
Probab=51.14 E-value=1.3e+02 Score=35.80 Aligned_cols=157 Identities=16% Similarity=0.157 Sum_probs=100.1
Q ss_pred CCCcEEEEEecCCC-CCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEccc
Q 003726 559 RSKPLIFSMARLDG-VKNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISA 637 (800)
Q Consensus 559 ~~k~iIl~vGRL~~-~Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~ 637 (800)
..++..+..|.-.. +||-+..++.+.+.. +++-.|.+.... ...+++-|.=+|
T Consensus 275 kr~~~AlVyGK~~~~w~~k~~~l~~l~~~~----eih~tV~~~~~~---------------------~~~~P~~V~NHG- 328 (559)
T PF15024_consen 275 KRKNQALVYGKERYMWKGKEKYLDVLHKYM----EIHGTVYDEPQR---------------------PPNVPSFVKNHG- 328 (559)
T ss_pred cccceeEEEccchhhhcCcHHHHHHHHhhc----EEEEEeccCCCC---------------------CcccchhhhhcC-
Confidence 34455566666543 678888888886642 344444433321 112334455555
Q ss_pred ccCccChHHHHHHHHccCcEEEecCC-CCCCcHHHHHHHHcCCcEEEcCcccccc-------------------------
Q 003726 638 QMNRVRNGELYRYIADTRGVFVQPAF-YEAFGLTVVEAMTCGLPTFATCHGGPAE------------------------- 691 (800)
Q Consensus 638 ~~~~v~~~el~~~ia~aadvfV~PS~-~E~fGl~vlEAMA~GlPVIAT~~GG~~E------------------------- 691 (800)
.++..|+...+.. +-+||---. +| |=+.+||+|.|+|.|-.....+.-
T Consensus 329 ---~l~~~ef~~lL~~-akvfiGlGfP~E--gPaPlEAia~G~vFlNp~~~pp~s~~n~~ff~~KPt~r~~~SQhPY~e~ 402 (559)
T PF15024_consen 329 ---ILSGDEFQQLLRK-AKVFIGLGFPYE--GPAPLEAIANGCVFLNPRFNPPHSRLNTEFFKGKPTLREWTSQHPYAEE 402 (559)
T ss_pred ---cCCHHHHHHHHHh-hhEeeecCCCCC--CCChHHHHHcCCccccccCCCCCcccccccccCCCCcceeccCChHHHh
Confidence 5677899999997 889985533 45 556899999999998875433321
Q ss_pred ccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhhh
Q 003726 692 IIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLTLAGVYGF 761 (800)
Q Consensus 692 iI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~~~~ 761 (800)
.|. .-.-+.||-+|.+++-+||.+++. .+- --.+--.||-+.+.+|+-.+.+.-.|
T Consensus 403 ~iG-~PhVytVd~~n~~~v~~Avk~il~----~~v---------~Py~P~efT~egmLeRv~~~ie~q~f 458 (559)
T PF15024_consen 403 FIG-EPHVYTVDINNSTEVEAAVKAILA----TPV---------EPYLPYEFTCEGMLERVNALIEKQDF 458 (559)
T ss_pred hCC-CCeEEEEcCCCHHHHHHHHHHHHh----cCC---------CCcCCcccCHHHHHHHHHHHHHhhhh
Confidence 111 123478889999999999988873 221 12333578888888888777665443
No 205
>COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=49.61 E-value=89 Score=32.73 Aligned_cols=49 Identities=22% Similarity=0.250 Sum_probs=29.6
Q ss_pred hHHHHHHHHHHHHHHHhCCCceEEE---ECCCCch-HHHHHHHhcCCCeEEEEec
Q 003726 377 YLETFAEDASNEIAAELQGVPDLII---GNYSDGN-LVATLLSYKLGVTQCNIAH 427 (800)
Q Consensus 377 yl~~f~~~~~~~ll~~~~~~PDIIh---~h~~~~~-lva~lla~~~gip~v~t~H 427 (800)
|.+.|.....+.+-.+++ --+|+ .||..+. .--...++.+.+|+|++.-
T Consensus 56 yres~~ks~~rlldSalk--n~~VIvDdtNYyksmRrqL~ceak~~~tt~ciIyl 108 (261)
T COG4088 56 YRESFLKSVERLLDSALK--NYLVIVDDTNYYKSMRRQLACEAKERKTTWCIIYL 108 (261)
T ss_pred HHHHHHHHHHHHHHHHhc--ceEEEEecccHHHHHHHHHHHHHHhcCCceEEEEE
Confidence 566777777776666663 22444 3555552 2334466777889887644
No 206
>PRK04020 rps2P 30S ribosomal protein S2; Provisional
Probab=48.14 E-value=1e+02 Score=31.95 Aligned_cols=113 Identities=19% Similarity=0.128 Sum_probs=64.8
Q ss_pred CCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCC-CcEEEcccccCccChHHHHH
Q 003726 571 DGVKNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLH-GQFRWISAQMNRVRNGELYR 649 (800)
Q Consensus 571 ~~~Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~-~~V~flG~~~~~v~~~el~~ 649 (800)
+..|=+..|..|+.-+... ..-++++||..+. ..+.+++.++..|-. -.=+|+| +...+..+..
T Consensus 47 dL~kT~~~L~~A~~~i~~~-~~~~ILfVgTk~~-----------~~~~v~k~A~~~g~~~v~~RWlg---G~LTN~~~~~ 111 (204)
T PRK04020 47 DVRKTDERIRIAAKFLSRY-EPEKILVVSSRQY-----------GQKPVQKFAEVVGAKAITGRFIP---GTLTNPSLKG 111 (204)
T ss_pred cHHHHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-----------HHHHHHHHHHHhCCeeecCccCC---CcCcCcchhc
Confidence 3345556666666555544 3467888888765 234566666666531 1126888 3344433332
Q ss_pred HHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEc-CccccccccccCceEEEECCCC
Q 003726 650 YIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFAT-CHGGPAEIIEHGVSGFHIDPYH 706 (800)
Q Consensus 650 ~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT-~~GG~~EiI~dg~~G~lv~p~d 706 (800)
++- =|+.++..- -.-...+.||...|.||||- |....+..| -+.++-+|
T Consensus 112 ~~~--Pdliiv~dp-~~~~~AI~EA~kl~IP~IaivDTn~dp~~V-----dypIP~Nd 161 (204)
T PRK04020 112 YIE--PDVVVVTDP-RGDAQAVKEAIEVGIPVVALCDTDNLTSNV-----DLVIPTNN 161 (204)
T ss_pred cCC--CCEEEEECC-cccHHHHHHHHHhCCCEEEEEeCCCCcccC-----ceeECCCC
Confidence 221 333333222 12367899999999999996 566666665 25565444
No 207
>PRK03359 putative electron transfer flavoprotein FixA; Reviewed
Probab=47.88 E-value=54 Score=35.20 Aligned_cols=42 Identities=19% Similarity=0.079 Sum_probs=29.8
Q ss_pred HHHHHHHhCCCceEEEEC----CCCchHHHHHHHhcCCCeEEEEecCC
Q 003726 386 SNEIAAELQGVPDLIIGN----YSDGNLVATLLSYKLGVTQCNIAHAL 429 (800)
Q Consensus 386 ~~~ll~~~~~~PDIIh~h----~~~~~lva~lla~~~gip~v~t~H~l 429 (800)
+...++.. .||+|.|- +.+++.++..+|..+|+|++..+-.+
T Consensus 104 La~ai~~~--~~DLVl~G~~s~D~~tgqvg~~lAe~Lg~P~vt~v~~l 149 (256)
T PRK03359 104 LAAAAQKA--GFDLILCGDGSSDLYAQQVGLLVGEILNIPAINGVSKI 149 (256)
T ss_pred HHHHHHHh--CCCEEEEcCccccCCCCcHHHHHHHHhCCCceeeEEEE
Confidence 33444443 59999962 23458899999999999988766554
No 208
>PF04230 PS_pyruv_trans: Polysaccharide pyruvyl transferase; InterPro: IPR007345 Pyruvyl-transferases are involved in peptidoglycan-associated polymer biosynthesis. CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora [, ].
Probab=47.18 E-value=3.3e+02 Score=27.78 Aligned_cols=47 Identities=17% Similarity=0.243 Sum_probs=35.2
Q ss_pred CcEEEcccccCccChHHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEcC
Q 003726 630 GQFRWISAQMNRVRNGELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFATC 685 (800)
Q Consensus 630 ~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT~ 685 (800)
.++.... ...+..++...++. ++++|...++ ..+=|+++|+|+|+-.
T Consensus 237 ~~~~~~~---~~~~~~~~~~~~~~-~~~~Is~RlH-----~~I~a~~~g~P~i~i~ 283 (286)
T PF04230_consen 237 FNVIIID---YSLSPDELLELISQ-ADLVISMRLH-----GAILALSLGVPVIAIS 283 (286)
T ss_pred cceeEec---CCCCHHHHHHHHhc-CCEEEecCCH-----HHHHHHHcCCCEEEEe
Confidence 3444444 25567899999996 9988877653 4778999999999864
No 209
>COG1647 Esterase/lipase [General function prediction only]
Probab=45.81 E-value=1.4e+02 Score=31.56 Aligned_cols=44 Identities=18% Similarity=0.231 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHhCCCceEEEECCCCchHHHHHHHhcCCCeEEEE
Q 003726 380 TFAEDASNEIAAELQGVPDLIIGNYSDGNLVATLLSYKLGVTQCNI 425 (800)
Q Consensus 380 ~f~~~~~~~ll~~~~~~PDIIh~h~~~~~lva~lla~~~gip~v~t 425 (800)
..+.++...+.. .+-..|.++--+.|++.+..+|....++=++.
T Consensus 70 ~~v~d~Y~~L~~--~gy~eI~v~GlSmGGv~alkla~~~p~K~iv~ 113 (243)
T COG1647 70 EDVEDGYRDLKE--AGYDEIAVVGLSMGGVFALKLAYHYPPKKIVP 113 (243)
T ss_pred HHHHHHHHHHHH--cCCCeEEEEeecchhHHHHHHHhhCCccceee
Confidence 344444444443 34566777888999999999998876543333
No 210
>KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism]
Probab=44.07 E-value=26 Score=39.95 Aligned_cols=45 Identities=27% Similarity=0.547 Sum_probs=31.6
Q ss_pred eEEEEEccCcCCCCccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHCCCccccceeEEeCCCCCCCCCcccccce
Q 003726 268 FNVVIVSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIQNQGLDVIPKILIVTRLIPDAKGTTCNQRLE 343 (800)
Q Consensus 268 ~rI~ivs~hg~~~~~~~lg~p~tGG~~vyild~araL~~eLa~~L~~~GheV~~~i~VvTr~~p~~~g~~~~~~~e 343 (800)
|||++|....+ |++||.. |.+.||+|. .|+| +|+.+|......+|
T Consensus 1 mkiaiigqs~f-------------g~~vy~~-------------lrk~gheiv---~vft--ipdk~g~~d~l~~e 45 (881)
T KOG2452|consen 1 MKIAVIGQSLF-------------GQEVYCH-------------LRKEGHEVV---GVFT--VPDKDGKADPLGLE 45 (881)
T ss_pred CeeEEechhhh-------------hHHHHHH-------------HHhcCceEE---EEEE--ecCCCCCcCccccc
Confidence 78999986655 8999988 899999985 2443 57776654433333
No 211
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=43.95 E-value=1.2e+02 Score=32.57 Aligned_cols=85 Identities=11% Similarity=-0.056 Sum_probs=45.1
Q ss_pred HHHHHcCCCC-c-EEEcccccCccChHHHHHHHHccCcEEEecCCCC--CCcHHHHHHHHcCCcEEEcCccccccccccC
Q 003726 621 GLIKQYNLHG-Q-FRWISAQMNRVRNGELYRYIADTRGVFVQPAFYE--AFGLTVVEAMTCGLPTFATCHGGPAEIIEHG 696 (800)
Q Consensus 621 ~li~~~gL~~-~-V~flG~~~~~v~~~el~~~ia~aadvfV~PS~~E--~fGl~vlEAMA~GlPVIAT~~GG~~EiI~dg 696 (800)
+.+.++|+++ + |...|..+ .-.+..+.+.+ .+|++|.=-..+ ++--++--|+.+|+|||.-+-+-...-
T Consensus 165 ~~~~~~G~~~~~iia~~gPfs-~e~n~al~~~~--~i~~lVtK~SG~~Gg~~eKi~AA~~lgi~vivI~RP~~~~~---- 237 (256)
T TIGR00715 165 AQALKLGFPSDRIIAMRGPFS-EELEKALLREY--RIDAVVTKASGEQGGELEKVKAAEALGINVIRIARPQTIPG---- 237 (256)
T ss_pred HHHHHcCCChhcEEEEeCCCC-HHHHHHHHHHc--CCCEEEEcCCCCccchHHHHHHHHHcCCcEEEEeCCCCCCC----
Confidence 3566777742 2 33444221 11122333333 356666544333 456678888999999999876643210
Q ss_pred ceEEEECCCCHHHHHHHHHH
Q 003726 697 VSGFHIDPYHPDQVAELMIE 716 (800)
Q Consensus 697 ~~G~lv~p~d~e~lA~aI~~ 716 (800)
+-.+ .+.+++.+.+.+
T Consensus 238 --~~~~--~~~~el~~~l~~ 253 (256)
T TIGR00715 238 --VAIF--DDISQLNQFVAR 253 (256)
T ss_pred --CccC--CCHHHHHHHHHH
Confidence 0112 367776666643
No 212
>PF05686 Glyco_transf_90: Glycosyl transferase family 90; InterPro: IPR006598 Cryptococcus neoformans is a pathogenic fungus which most commonly affects the central nervous system and causes fatal meningoencephalitis primarily in patients with AIDS. This fungus produces a thick extracellular polysaccharide capsule which is well recognised as a virulence factor. CAP10 is required for capsule formation and virulence [].
Probab=41.98 E-value=69 Score=36.59 Aligned_cols=82 Identities=11% Similarity=-0.019 Sum_probs=54.7
Q ss_pred HHcCCcEEEcCc---cccccccccCceEEEECC-CCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHH
Q 003726 675 MTCGLPTFATCH---GGPAEIIEHGVSGFHIDP-YHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSE 750 (800)
Q Consensus 675 MA~GlPVIAT~~---GG~~EiI~dg~~G~lv~p-~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~ 750 (800)
|+||-.|+.... .-..+.+...++=+-|.. +|..++.++|. -+.+|++..++|+++|.+.+.+..+.+.+..
T Consensus 234 L~c~SvVl~~~~~~~e~f~~~L~P~vHYVPV~~~~d~sdL~~~v~----w~~~~~~~A~~IA~~g~~f~~~~L~~~~~~~ 309 (395)
T PF05686_consen 234 LACNSVVLKVKSPYYEFFYRALKPWVHYVPVKRDDDLSDLEEKVE----WLNAHDDEAQRIAENGQRFAREYLTMEDVYC 309 (395)
T ss_pred HcCCceEEEeCCcHHHHHHhhhcccccEEEeccccchhhHHHHhh----hcccChHHHHHHHHHHHHHHHHHhhhhHHHH
Confidence 566655555321 112222334444455554 46788888874 4458999999999999999988888888777
Q ss_pred HHHHHHHHhh
Q 003726 751 RLLTLAGVYG 760 (800)
Q Consensus 751 ~ll~ly~~~~ 760 (800)
-+..+...|+
T Consensus 310 Y~~~LL~eYa 319 (395)
T PF05686_consen 310 YWRRLLLEYA 319 (395)
T ss_pred HHHHHHHHHH
Confidence 7777766654
No 213
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=41.63 E-value=3.5e+02 Score=30.43 Aligned_cols=34 Identities=18% Similarity=0.086 Sum_probs=24.8
Q ss_pred CCceEEEECCCCchHHHHHHHhcCCCeEEEEecC
Q 003726 395 GVPDLIIGNYSDGNLVATLLSYKLGVTQCNIAHA 428 (800)
Q Consensus 395 ~~PDIIh~h~~~~~lva~lla~~~gip~v~t~H~ 428 (800)
+-.-+..+-.+.|+..|++.+.....|+....+-
T Consensus 173 G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~l 206 (348)
T PF09752_consen 173 GYGPLGLTGISMGGHMAALAASNWPRPVALVPCL 206 (348)
T ss_pred CCCceEEEEechhHhhHHhhhhcCCCceeEEEee
Confidence 4456777777888888888888777776655553
No 214
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=40.26 E-value=3.4e+02 Score=29.30 Aligned_cols=111 Identities=15% Similarity=0.102 Sum_probs=70.5
Q ss_pred EEEEecCCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCc---cchHHHHHHHHHHHHHHHcCCCCcEEEcccccC
Q 003726 564 IFSMARLDGVKNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNS---RDREEMAEIEKMHGLIKQYNLHGQFRWISAQMN 640 (800)
Q Consensus 564 Il~vGRL~~~Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~---~~~e~~~~~~~l~~li~~~gL~~~V~flG~~~~ 640 (800)
++.++........+.+++.+.++++. .++++..|... |--+ ...-..+..+.+.+.++++|++=-.....
T Consensus 28 ~~~iaGPCsie~~~~~~~~A~~lk~~--g~~~~r~~~~k-pRTs~~s~~G~g~~gl~~l~~~~~~~Gl~~~te~~d---- 100 (266)
T PRK13398 28 KIIIAGPCAVESEEQMVKVAEKLKEL--GVHMLRGGAFK-PRTSPYSFQGLGEEGLKILKEVGDKYNLPVVTEVMD---- 100 (266)
T ss_pred EEEEEeCCcCCCHHHHHHHHHHHHHc--CCCEEEEeeec-CCCCCCccCCcHHHHHHHHHHHHHHcCCCEEEeeCC----
Confidence 45566667778899999999999885 45666666432 1111 12113456778888899998753333332
Q ss_pred ccChHHHHHHHHccCcEEEecCC-CCCCcHHHHHHHHcCCcEEEcCc
Q 003726 641 RVRNGELYRYIADTRGVFVQPAF-YEAFGLTVVEAMTCGLPTFATCH 686 (800)
Q Consensus 641 ~v~~~el~~~ia~aadvfV~PS~-~E~fGl~vlEAMA~GlPVIAT~~ 686 (800)
.+-..++++..|++-.+|+ .+.+.+ +-++-..|+||+.++.
T Consensus 101 ----~~~~~~l~~~vd~~kIga~~~~n~~L-L~~~a~~gkPV~lk~G 142 (266)
T PRK13398 101 ----TRDVEEVADYADMLQIGSRNMQNFEL-LKEVGKTKKPILLKRG 142 (266)
T ss_pred ----hhhHHHHHHhCCEEEECcccccCHHH-HHHHhcCCCcEEEeCC
Confidence 2333444445889999988 344433 4455567999999853
No 215
>PRK13932 stationary phase survival protein SurE; Provisional
Probab=40.12 E-value=4.1e+02 Score=28.63 Aligned_cols=34 Identities=29% Similarity=0.466 Sum_probs=22.9
Q ss_pred CCCceEEEE--CC---------CCchHHHHHHHhcCCCeEEEEec
Q 003726 394 QGVPDLIIG--NY---------SDGNLVATLLSYKLGVTQCNIAH 427 (800)
Q Consensus 394 ~~~PDIIh~--h~---------~~~~lva~lla~~~gip~v~t~H 427 (800)
..+||+|++ |. ..|...|++-+...|+|-+..-.
T Consensus 89 ~~~pDLVvSGIN~G~N~G~dv~ySGTVgAA~Ea~~~GiPsIA~S~ 133 (257)
T PRK13932 89 PEKPDLIVSGINYGSNTATNTLYSGTVAAALEGAIQGIPSLAFSL 133 (257)
T ss_pred CCCCCEEEECCcCCCCCCcCEecchhHHHHHHHHHcCCCeEEEEc
Confidence 458999994 22 11345666777778999877654
No 216
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=39.89 E-value=2.3e+02 Score=28.91 Aligned_cols=31 Identities=26% Similarity=0.323 Sum_probs=23.2
Q ss_pred EEEECCCCchHHHHHHHhcCCCeEEEEecCC
Q 003726 399 LIIGNYSDGNLVATLLSYKLGVTQCNIAHAL 429 (800)
Q Consensus 399 IIh~h~~~~~lva~lla~~~gip~v~t~H~l 429 (800)
++.+-++.|+..|..++.+.++|.|.+-=++
T Consensus 61 ~~liGSSlGG~~A~~La~~~~~~avLiNPav 91 (187)
T PF05728_consen 61 VVLIGSSLGGFYATYLAERYGLPAVLINPAV 91 (187)
T ss_pred eEEEEEChHHHHHHHHHHHhCCCEEEEcCCC
Confidence 4555557788999999999999987764443
No 217
>PRK06988 putative formyltransferase; Provisional
Probab=39.64 E-value=1.6e+02 Score=32.46 Aligned_cols=12 Identities=33% Similarity=0.634 Sum_probs=8.5
Q ss_pred CCceEEEECCCC
Q 003726 395 GVPDLIIGNYSD 406 (800)
Q Consensus 395 ~~PDIIh~h~~~ 406 (800)
..||+|++-.+.
T Consensus 76 ~~~Dliv~~~~~ 87 (312)
T PRK06988 76 AAPDFIFSFYYR 87 (312)
T ss_pred cCCCEEEEehhc
Confidence 389999865544
No 218
>TIGR00087 surE 5'/3'-nucleotidase SurE. E. coli SurE is Recommended cutoffs are 15 for homology, 40 for probable orthology, and 200 for orthology with full-length homology.
Probab=38.15 E-value=3.4e+02 Score=28.94 Aligned_cols=35 Identities=31% Similarity=0.396 Sum_probs=23.4
Q ss_pred CCCceEEEE--CC---------CCchHHHHHHHhcCCCeEEEEecC
Q 003726 394 QGVPDLIIG--NY---------SDGNLVATLLSYKLGVTQCNIAHA 428 (800)
Q Consensus 394 ~~~PDIIh~--h~---------~~~~lva~lla~~~gip~v~t~H~ 428 (800)
..+||+|++ |. ..|...|++-+...|+|-+..-..
T Consensus 84 ~~~pDLVvSGiN~G~N~g~~v~ySGTVgAA~ea~~~GipaiA~S~~ 129 (244)
T TIGR00087 84 PEVPDLVISGINAGENLGTDVTYSGTVGAAMEAAIHGVPAIAISLQ 129 (244)
T ss_pred cCCCCeEEeccccCCCCCccEecchhHHHHHHHHHcCCCeEEEEec
Confidence 458999994 32 113456667777889998876553
No 219
>smart00672 CAP10 Putative lipopolysaccharide-modifying enzyme.
Probab=37.70 E-value=1.6e+02 Score=31.51 Aligned_cols=48 Identities=13% Similarity=0.080 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhh
Q 003726 709 QVAELMIEFFEKCYNDPSHWNKISDGGLKRIYERYTWKIYSERLLTLAGVYG 760 (800)
Q Consensus 709 ~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v~~~ysw~~~a~~ll~ly~~~~ 760 (800)
++.++|.-+ ..+++..++|+++|++.+.+..+.+.+..-+..+...|+
T Consensus 203 ~l~~~i~~~----~~~~~~a~~Ia~~~~~~~~~~L~~~~~~~Y~~~ll~eya 250 (256)
T smart00672 203 ELKEAVDWG----NEHDKKAQEIGKRGSEFIQQNLSMEDVYDYMFHLLQEYA 250 (256)
T ss_pred hHHHHHHHH----HhCHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence 488887544 489999999999999999988999988888877777654
No 220
>PRK11519 tyrosine kinase; Provisional
Probab=37.23 E-value=5.5e+02 Score=31.77 Aligned_cols=46 Identities=15% Similarity=0.031 Sum_probs=30.2
Q ss_pred HHHHHHHHHHhCCCceEEEECCCCch--HHHHHHHhcCCCeEEEEecC
Q 003726 383 EDASNEIAAELQGVPDLIIGNYSDGN--LVATLLSYKLGVTQCNIAHA 428 (800)
Q Consensus 383 ~~~~~~ll~~~~~~PDIIh~h~~~~~--lva~lla~~~gip~v~t~H~ 428 (800)
......++..+..++|+|+...++.. .-+..+++..+..+.+.-++
T Consensus 622 s~~~~~ll~~l~~~yD~ViiDtpP~~~v~Da~~l~~~~d~~l~Vvr~~ 669 (719)
T PRK11519 622 SERFAELVNWASKNYDLVLIDTPPILAVTDAAIVGRHVGTTLMVARYA 669 (719)
T ss_pred HHHHHHHHHHHHhcCCEEEEeCCCcccchHHHHHHHHCCeEEEEEeCC
Confidence 34455666666668999998887753 23556777777666555444
No 221
>PRK12342 hypothetical protein; Provisional
Probab=36.86 E-value=77 Score=34.01 Aligned_cols=34 Identities=21% Similarity=0.090 Sum_probs=26.8
Q ss_pred CceEEEEC--C--CCchHHHHHHHhcCCCeEEEEecCC
Q 003726 396 VPDLIIGN--Y--SDGNLVATLLSYKLGVTQCNIAHAL 429 (800)
Q Consensus 396 ~PDIIh~h--~--~~~~lva~lla~~~gip~v~t~H~l 429 (800)
.||+|.|- . .+++.++..+|..+|+|++..+..+
T Consensus 109 ~~DLVl~G~~s~D~~tgqvg~~lA~~Lg~P~vt~v~~~ 146 (254)
T PRK12342 109 GFDLLLFGEGSGDLYAQQVGLLLGELLQLPVINAVSKI 146 (254)
T ss_pred CCCEEEEcCCcccCCCCCHHHHHHHHhCCCcEeeEEEE
Confidence 59999962 2 3348899999999999998877654
No 222
>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=36.01 E-value=2.7e+02 Score=32.53 Aligned_cols=97 Identities=9% Similarity=0.089 Sum_probs=62.2
Q ss_pred HHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCC-cEEEcCc--cccccccccCceEEEECCCCHHHHHHHHHHHHHHh
Q 003726 645 GELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGL-PTFATCH--GGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKC 721 (800)
Q Consensus 645 ~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~Gl-PVIAT~~--GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l 721 (800)
....+.+++ +-..++|+-.+...-.++||+.+|+ |||.++. ....+++.-..-++.++ .+++-+.|.+.+..
T Consensus 335 ~~y~~~m~~-S~FCL~p~Gd~~ts~R~fdai~~gCvPViisd~~~lpf~~~~d~~~fSV~v~---~~~v~~~~~~iL~~- 409 (464)
T KOG1021|consen 335 LNYMEGMQD-SKFCLCPPGDTPTSPRLFDAIVSGCVPVIISDGIQLPFGDVLDWTEFSVFVP---EKDVPELIKNILLS- 409 (464)
T ss_pred chHHHHhhc-CeEEECCCCCCcccHhHHHHHHhCCccEEEcCCcccCcCCCccceEEEEEEE---HHHhhhHHHHHHHh-
Confidence 345666675 8899999999999899999999986 8888864 33344444444556664 34444444555432
Q ss_pred cCCHHHHHHHHHHHHHHHHHhCCHHH
Q 003726 722 YNDPSHWNKISDGGLKRIYERYTWKI 747 (800)
Q Consensus 722 ~~dp~~~~~ms~~a~~~v~~~ysw~~ 747 (800)
.......+|.++....+.++|.|+.
T Consensus 410 -i~~~~~~~m~~~v~~~v~r~~~~~~ 434 (464)
T KOG1021|consen 410 -IPEEEVLRMRENVIRLVPRHFLKKP 434 (464)
T ss_pred -cCHHHHHHHHHHHHHHHHhhEEeCC
Confidence 2334446666666655666666664
No 223
>TIGR02990 ectoine_eutA ectoine utilization protein EutA. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti and Silicibacter pomeroyi. It is missing from two other species with the other ectoine transport and utilization genes: Pseudomonas putida and Agrobacterium tumefaciens.
Probab=34.64 E-value=2.8e+02 Score=29.39 Aligned_cols=34 Identities=9% Similarity=0.016 Sum_probs=21.6
Q ss_pred CCCceEEEE--CCCCchHHHHHHHhcCCCeEEEEec
Q 003726 394 QGVPDLIIG--NYSDGNLVATLLSYKLGVTQCNIAH 427 (800)
Q Consensus 394 ~~~PDIIh~--h~~~~~lva~lla~~~gip~v~t~H 427 (800)
...+|.|.. ....+.-+...+-+.+|+|++..-.
T Consensus 179 ~~~aDAifisCTnLrt~~vi~~lE~~lGkPVlsSNq 214 (239)
T TIGR02990 179 DPDADALFLSCTALRAATCAQRIEQAIGKPVVTSNQ 214 (239)
T ss_pred CCCCCEEEEeCCCchhHHHHHHHHHHHCCCEEEHHH
Confidence 347787763 3344455555666779999876543
No 224
>PF13407 Peripla_BP_4: Periplasmic binding protein domain; PDB: 3BRS_B 3GBP_A 3GA5_A 1GCG_A 1GCA_A 3H75_A 3D02_A 3L49_B 3EJW_B 3T95_A ....
Probab=33.54 E-value=3e+02 Score=28.25 Aligned_cols=74 Identities=11% Similarity=0.131 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHcCCCCcEEEcccccCccChHHHHHHHHccCc-EEEecCCCCCCcHHHHHHHHcCCcEEEcCcc
Q 003726 614 AEIEKMHGLIKQYNLHGQFRWISAQMNRVRNGELYRYIADTRG-VFVQPAFYEAFGLTVVEAMTCGLPTFATCHG 687 (800)
Q Consensus 614 ~~~~~l~~li~~~gL~~~V~flG~~~~~v~~~el~~~ia~aad-vfV~PS~~E~fGl~vlEAMA~GlPVIAT~~G 687 (800)
...+-+++.++++|..-.+.+.+.-+.......+-.+++...| +++.|...+...-.+-++...|.|||..+.+
T Consensus 15 ~~~~g~~~~a~~~g~~~~~~~~~~~d~~~q~~~i~~~i~~~~d~Iiv~~~~~~~~~~~l~~~~~~gIpvv~~d~~ 89 (257)
T PF13407_consen 15 QVIKGAKAAAKELGYEVEIVFDAQNDPEEQIEQIEQAISQGVDGIIVSPVDPDSLAPFLEKAKAAGIPVVTVDSD 89 (257)
T ss_dssp HHHHHHHHHHHHHTCEEEEEEESTTTHHHHHHHHHHHHHTTESEEEEESSSTTTTHHHHHHHHHTTSEEEEESST
T ss_pred HHHHHHHHHHHHcCCEEEEeCCCCCCHHHHHHHHHHHHHhcCCEEEecCCCHHHHHHHHHHHhhcCceEEEEecc
Confidence 3455566666666642222211111111112233334444556 4556666777777788899999999998777
No 225
>PF00731 AIRC: AIR carboxylase; InterPro: IPR000031 Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. PurK, N5-carboxyaminoimidazole ribonucleotide (N5_CAIR) synthetase, catalyzes the conversion of 5-aminoimidazole ribonucleotide (AIR), ATP, and bicarbonate to N5-CAIR, ADP, and Pi. PurE converts N5-CAIR to CAIR, the sixth step of de novo purine biosynthesis. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. Some members of this family contain two copies of this domain []. The crystal structure of PurE indicates a unique quaternary structure that confirms the octameric nature of the enzyme [].; GO: 0004638 phosphoribosylaminoimidazole carboxylase activity, 0006189 'de novo' IMP biosynthetic process; PDB: 3TRH_O 2YWX_A 2NSL_A 1D7A_A 2NSJ_A 1QCZ_A 2ATE_A 2NSH_A 3RG8_C 3RGG_D ....
Probab=32.73 E-value=5e+02 Score=25.66 Aligned_cols=129 Identities=20% Similarity=0.241 Sum_probs=59.7
Q ss_pred EEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEcccccCccChHHHHHHHHc----cCcEEEecCCCCCCcHH
Q 003726 595 LVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISAQMNRVRNGELYRYIAD----TRGVFVQPAFYEAFGLT 670 (800)
Q Consensus 595 LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~~~~~v~~~el~~~ia~----aadvfV~PS~~E~fGl~ 670 (800)
.+|.|+..| ....++..+..+++|++-.++..+. +-..+++..++.. .+++||.-+=.++ +|.
T Consensus 4 ~Ii~gs~SD---------~~~~~~a~~~L~~~gi~~~~~V~sa---HR~p~~l~~~~~~~~~~~~~viIa~AG~~a-~Lp 70 (150)
T PF00731_consen 4 AIIMGSTSD---------LPIAEEAAKTLEEFGIPYEVRVASA---HRTPERLLEFVKEYEARGADVIIAVAGMSA-ALP 70 (150)
T ss_dssp EEEESSGGG---------HHHHHHHHHHHHHTT-EEEEEE--T---TTSHHHHHHHHHHTTTTTESEEEEEEESS---HH
T ss_pred EEEeCCHHH---------HHHHHHHHHHHHHcCCCEEEEEEec---cCCHHHHHHHHHHhccCCCEEEEEECCCcc-cch
Confidence 455666555 2345556666677777666777763 3334566666543 2456766544332 233
Q ss_pred HHHHHHcCCcEEEcC--cc---ccc---cccc--cCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 003726 671 VVEAMTCGLPTFATC--HG---GPA---EIIE--HGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKR 738 (800)
Q Consensus 671 vlEAMA~GlPVIAT~--~G---G~~---EiI~--dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~ 738 (800)
-+=|-..-+|||+.. .| |.. -+++ .|..=-.+..+++...|-...+++. ..|++.|+++...-.+.
T Consensus 71 gvva~~t~~PVIgvP~~~~~~~g~d~l~S~vqMp~g~pvatv~i~~~~nAA~~A~~ILa--~~d~~l~~kl~~~~~~~ 146 (150)
T PF00731_consen 71 GVVASLTTLPVIGVPVSSGYLGGLDSLLSIVQMPSGVPVATVGINNGFNAALLAARILA--LKDPELREKLRAYREKM 146 (150)
T ss_dssp HHHHHHSSS-EEEEEE-STTTTTHHHHHHHHT--TTS--EE-SSTHHHHHHHHHHHHHH--TT-HHHHHHHHHHHHHH
T ss_pred hhheeccCCCEEEeecCcccccCcccHHHHHhccCCCCceEEEccCchHHHHHHHHHHh--cCCHHHHHHHHHHHHHH
Confidence 333444477777752 11 111 1222 1221112233344444444444442 37888888876544433
No 226
>PF04392 ABC_sub_bind: ABC transporter substrate binding protein; InterPro: IPR007487 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energize diverse biological systems. ABC transporters are minimally constituted of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These regions can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. This family contains many hypothetical proteins and some ABC transporter substrate binding proteins.; PDB: 3LFT_A 3LKV_A.
Probab=29.36 E-value=3.1e+02 Score=29.53 Aligned_cols=86 Identities=16% Similarity=0.241 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHHcCCCCcEEEcccccCccChHHHHHHHHccCcEEEecCC---CCCCcHHHHHHHHcCCcEEEcCcccc
Q 003726 613 MAEIEKMHGLIKQYNLHGQFRWISAQMNRVRNGELYRYIADTRGVFVQPAF---YEAFGLTVVEAMTCGLPTFATCHGGP 689 (800)
Q Consensus 613 ~~~~~~l~~li~~~gL~~~V~flG~~~~~v~~~el~~~ia~aadvfV~PS~---~E~fGl~vlEAMA~GlPVIAT~~GG~ 689 (800)
....+.+++.++++|+. +...... +........+.+....|+++.+.. ...+...+..+..+++||+++..
T Consensus 146 ~~~~~~~~~~a~~~g~~--l~~~~v~-~~~~~~~~~~~l~~~~da~~~~~~~~~~~~~~~i~~~~~~~~iPv~~~~~--- 219 (294)
T PF04392_consen 146 VAQIEQLRKAAKKLGIE--LVEIPVP-SSEDLEQALEALAEKVDALYLLPDNLVDSNFEAILQLANEAKIPVFGSSD--- 219 (294)
T ss_dssp HHHHHHHHHHHHHTT-E--EEEEEES-SGGGHHHHHHHHCTT-SEEEE-S-HHHHHTHHHHHHHCCCTT--EEESSH---
T ss_pred HHHHHHHHHHHHHcCCE--EEEEecC-cHhHHHHHHHHhhccCCEEEEECCcchHhHHHHHHHHHHhcCCCEEECCH---
Confidence 45677888888888863 3333211 222233444444445787777754 23344445577789999999853
Q ss_pred ccccccCce-EEEECCC
Q 003726 690 AEIIEHGVS-GFHIDPY 705 (800)
Q Consensus 690 ~EiI~dg~~-G~lv~p~ 705 (800)
..+.+|.- |+.++..
T Consensus 220 -~~v~~Gal~~~~~~~~ 235 (294)
T PF04392_consen 220 -FYVKAGALGGYSVDYY 235 (294)
T ss_dssp -HHHCTT-SEEEE--HH
T ss_pred -HHhcCCcEEEEccCHH
Confidence 33444543 4555433
No 227
>PLN00016 RNA-binding protein; Provisional
Probab=29.21 E-value=47 Score=37.30 Aligned_cols=20 Identities=20% Similarity=0.217 Sum_probs=16.0
Q ss_pred HHHHHHHHCCCccccceeEEeCCC
Q 003726 307 EMLLRIQNQGLDVIPKILIVTRLI 330 (800)
Q Consensus 307 eLa~~L~~~GheV~~~i~VvTr~~ 330 (800)
.|++.|.++||+|+ +++|..
T Consensus 71 ~lv~~L~~~G~~V~----~l~R~~ 90 (378)
T PLN00016 71 YLAKELVKAGHEVT----LFTRGK 90 (378)
T ss_pred HHHHHHHHCCCEEE----EEecCC
Confidence 45667889999999 898864
No 228
>TIGR00732 dprA DNA protecting protein DprA. Disruption of this gene in both Haemophilus influenzae and Helicobacter pylori drastically reduces the efficiency of transformation with exogenous DNA, but with different levels of effect on chromosomal (linear) and plasmid (circular) DNA. This difference suggests the DprA is not active in recombination, and it has been shown not to affect DNA binding, leaving the intermediate step in natural transformation, DNA processing. In Strep. pneumoniae, inactivation of dprA had no effect on the uptake of DNA. All of these data indicated that DprA is required at a later stage in transformation. Subsequently DprA and RecA were both shown in S. pneumoniae to be required to protect incoming ssDNA from immediate degradation. Role of DprA in non-transformable species is not known. The gene symbol smf was assigned in E. coli, but without assignment of function.
Probab=28.31 E-value=4e+02 Score=27.88 Aligned_cols=125 Identities=16% Similarity=0.156 Sum_probs=62.0
Q ss_pred CCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcC-CCCcE-EEc-ccccCccChHHHHH
Q 003726 573 VKNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYN-LHGQF-RWI-SAQMNRVRNGELYR 649 (800)
Q Consensus 573 ~Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~g-L~~~V-~fl-G~~~~~v~~~el~~ 649 (800)
.+|+|....-.+... ....+.|+|+|.+ ..++. +-.++.+.+.+.| + -| .|. +....+-....--+
T Consensus 82 A~GiD~~ah~~al~~---~g~tIaVl~~gld---~~yp~---~n~~l~~~i~~~ggl--liSe~p~~~~~~~~~f~~RNr 150 (220)
T TIGR00732 82 ALGIDGIAHKAALKV---NGRTIAVLGTGLD---QIYPR---QNSKLAAKIAENGGL--LLSEYPPDTKPIKYNFPKRNR 150 (220)
T ss_pred hhhHHHHHHHHHHHc---CCCEEEEECCCCc---cCCch---hhHHHHHHHHHcCCE--EEEecCCCCCCCcccHHHHHH
Confidence 579988776554322 2456777787765 11111 1223333333333 2 00 010 00000101112233
Q ss_pred HHHccCcEEEecCCCCCCc--HHHHHHHHcCCcEEEcC-------ccccccccccCceEEEECCCCHHHHHH
Q 003726 650 YIADTRGVFVQPAFYEAFG--LTVVEAMTCGLPTFATC-------HGGPAEIIEHGVSGFHIDPYHPDQVAE 712 (800)
Q Consensus 650 ~ia~aadvfV~PS~~E~fG--l~vlEAMA~GlPVIAT~-------~GG~~EiI~dg~~G~lv~p~d~e~lA~ 712 (800)
.++..+++.|...-.+..| .++-.|+..|+||++-. ..|...+|.+| ...+. +.+++.+
T Consensus 151 iia~ls~~vivve~~~~sGtl~ta~~A~~~gr~v~~~pg~~~~~~~~G~~~Li~~G-A~~i~---~~~d~~~ 218 (220)
T TIGR00732 151 IISGLSRAVLVVEAPLKSGALITARYALEQGREVFAYPGDLNSPESDGCHKLIEQG-AALIT---SAKDILE 218 (220)
T ss_pred HHHHhcCEEEEEECCCCCchHHHHHHHHHhCCcEEEEcCCCCCccchHHHHHHHCC-CEEEC---CHHHHHH
Confidence 4444455555544434445 57789999999999983 24667788777 33333 4555443
No 229
>COG4567 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain [Signal transduction mechanisms / Transcription]
Probab=27.88 E-value=1.4e+02 Score=29.73 Aligned_cols=54 Identities=20% Similarity=0.303 Sum_probs=42.3
Q ss_pred CCCCCcHHHHHHHHcCCc----EEEcCccccccccc---cCceEEEECCCCHHHHHHHHHH
Q 003726 663 FYEAFGLTVVEAMTCGLP----TFATCHGGPAEIIE---HGVSGFHIDPYHPDQVAELMIE 716 (800)
Q Consensus 663 ~~E~fGl~vlEAMA~GlP----VIAT~~GG~~EiI~---dg~~G~lv~p~d~e~lA~aI~~ 716 (800)
+..+.|+.++|++..-.| ||.|.+|.++..|+ -|.+-++..|-|.+++..++.+
T Consensus 63 L~~gsGL~~i~~lr~~~~d~rivvLTGy~sIATAV~AvKlGA~~YLaKPAdaDdi~aAl~~ 123 (182)
T COG4567 63 LGDGSGLAVIEALRERRADMRIVVLTGYASIATAVEAVKLGACDYLAKPADADDILAALLR 123 (182)
T ss_pred ecCCCchHHHHHHHhcCCcceEEEEecchHHHHHHHHHHhhhhhhcCCCCChHHHHHHHhh
Confidence 356899999999977554 77788887766554 5667789999999999888854
No 230
>PF03668 ATP_bind_2: P-loop ATPase protein family; InterPro: IPR005337 This entry represents UPF0042 nucleotide-binding proteins. This is a family of putative P-loop ATPases [], as they contain an ATP-binding site and display ATPase and GTPase activities.; GO: 0005524 ATP binding
Probab=27.27 E-value=1.9e+02 Score=31.66 Aligned_cols=123 Identities=22% Similarity=0.331 Sum_probs=70.2
Q ss_pred hHHHHHhhcccCCeeeeccccCCCHHHHHHHHHHHHHHhhcCCCCCCchhhHHHhhccCCccccCchHH-----------
Q 003726 168 PLLNFLRVHKHDGFVMMLNDRIQSISKLQSALQRAEEYLSKFLPDTPYSEFEFEIQGMGFERGWGDTAQ----------- 236 (800)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gwg~~~~----------- 236 (800)
.+|.-||... .+.|+-.=-|+.+|+..|..... . +.+ +.+.-.++..||..|=-..|.
T Consensus 123 ~~L~~lr~~A----d~vIDTs~l~~~~Lr~~i~~~~~---~---~~~-~~l~v~i~SFGfK~GiP~dAD~VfDvRfLpNP 191 (284)
T PF03668_consen 123 ELLEPLRERA----DLVIDTSNLSVHQLRERIRERFG---G---DKE-SRLTVTIQSFGFKYGIPPDADLVFDVRFLPNP 191 (284)
T ss_pred HHHHHHHHhC----CEEEECCCCCHHHHHHHHHHHhc---c---CCC-CceEEEEEEeccccCCCCCCCEEEEcCcCCCC
Confidence 4455555443 36677677788888888876432 1 111 345556777777554333322
Q ss_pred ------------------------HHHHHHHHHHHhhcCCCcchHhhhhccCCceeEEEEEccCcCCCCccCCCCCCCCc
Q 003726 237 ------------------------RVSEMVHLLLDILQAPDPATLETFLGRIPMVFNVVIVSPHGYFGQANVLGLPDTGG 292 (800)
Q Consensus 237 ------------------------~~~~~~~~l~~~~~~p~~~~l~~f~~~~p~~~rI~ivs~hg~~~~~~~lg~p~tGG 292 (800)
-+.|.+..+.++++. .++.|...-..-+.|+|=| |||
T Consensus 192 ~y~~~Lr~lTG~D~~V~~yv~~~~~~~~f~~~~~~~l~~----~lp~y~~egk~~ltIaiGC---------------TGG 252 (284)
T PF03668_consen 192 YYVPELRPLTGLDKPVQDYVLSDPEAQEFLEKIEDLLDF----LLPRYEKEGKSYLTIAIGC---------------TGG 252 (284)
T ss_pred CCChhhhhcCCCChHHHHHHHcChhHHHHHHHHHHHHHH----HHHHHHhcCCceEEEEEEc---------------CCC
Confidence 222333333333321 2333333333345565544 699
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHCCCccccceeEEeCC
Q 003726 293 QVVYILDQVRALENEMLLRIQNQGLDVIPKILIVTRL 329 (800)
Q Consensus 293 ~~vyild~araL~~eLa~~L~~~GheV~~~i~VvTr~ 329 (800)
+-+.|. ++++|++.|++.|+.|. |.-|.
T Consensus 253 ~HRSV~-----iae~La~~L~~~~~~v~----v~HRd 280 (284)
T PF03668_consen 253 QHRSVA-----IAERLAERLREKGYTVV----VRHRD 280 (284)
T ss_pred cCcHHH-----HHHHHHHHHHhcCCcce----EEcCC
Confidence 988887 55688999999999887 66554
No 231
>PRK10840 transcriptional regulator RcsB; Provisional
Probab=27.10 E-value=6.5e+02 Score=25.25 Aligned_cols=109 Identities=9% Similarity=0.182 Sum_probs=63.7
Q ss_pred eEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEcccccCccChHHHHHHHHc-cCcEEEecCCCCC----C
Q 003726 593 VNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISAQMNRVRNGELYRYIAD-TRGVFVQPAFYEA----F 667 (800)
Q Consensus 593 v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~~~~~v~~~el~~~ia~-aadvfV~PS~~E~----f 667 (800)
.+++|+.+.+. ....+....+..+ .+...+. .....+....+.. ..|++++-....+ .
T Consensus 4 ~~Ilivdd~~~-----------~~~~l~~~L~~~~---~~~~v~~---~~~~~~~~~~~~~~~~DlvllD~~l~~~~~~~ 66 (216)
T PRK10840 4 MNVIIADDHPI-----------VLFGIRKSLEQIE---WVNVVGE---FEDSTALINNLPKLDAHVLITDLSMPGDKYGD 66 (216)
T ss_pred eEEEEECCcHH-----------HHHHHHHHHhcCC---CCEEEEE---ECCHHHHHHHHHhCCCCEEEEeCcCCCCCCCC
Confidence 56777776654 1334455554432 2222221 1123445554432 3688877543332 5
Q ss_pred cHHHHHHHH---cCCcEEEc-Ccccc---ccccccCceEEEECCCCHHHHHHHHHHHH
Q 003726 668 GLTVVEAMT---CGLPTFAT-CHGGP---AEIIEHGVSGFHIDPYHPDQVAELMIEFF 718 (800)
Q Consensus 668 Gl~vlEAMA---~GlPVIAT-~~GG~---~EiI~dg~~G~lv~p~d~e~lA~aI~~~l 718 (800)
|+.+++.+. .++|+|.- ..... .+.++.|..|++..|.+++++.++|..+.
T Consensus 67 g~~~~~~l~~~~~~~~iIvls~~~~~~~~~~a~~~Ga~~yl~K~~~~~~l~~ai~~v~ 124 (216)
T PRK10840 67 GITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDLPKALAALQ 124 (216)
T ss_pred HHHHHHHHHHHCCCCcEEEEEecCCHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHHH
Confidence 777777664 34677664 33322 23456799999999999999999997765
No 232
>PRK04531 acetylglutamate kinase; Provisional
Probab=27.01 E-value=1.6e+02 Score=33.78 Aligned_cols=57 Identities=9% Similarity=0.080 Sum_probs=35.9
Q ss_pred CCCcEEEEEecCCCCCCHHHHHHHHHHhhccCCCeEEEEE-eccCCCCCccchHHHHHHHHHHHHHHHcCCCCcE
Q 003726 559 RSKPLIFSMARLDGVKNLTGLVECYGKSSKLRELVNLVVV-GGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQF 632 (800)
Q Consensus 559 ~~k~iIl~vGRL~~~Kgl~~LleA~~~l~~~~~~v~LvIV-G~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V 632 (800)
+.+..++-+|.=.-..+++.+++.++.+... ..++|+| |+|+ .+.++.++.|++.+.
T Consensus 35 ~~~~~VIKiGG~~l~~~~~~l~~dla~L~~~--G~~~VlVHGggp---------------qI~~~l~~~gie~~~ 92 (398)
T PRK04531 35 AERFAVIKVGGAVLRDDLEALASSLSFLQEV--GLTPIVVHGAGP---------------QLDAELDAAGIEKET 92 (398)
T ss_pred CCcEEEEEEChHHhhcCHHHHHHHHHHHHHC--CCcEEEEECCCH---------------HHHHHHHHcCCCcEE
Confidence 4466666666522223578888888887664 4566666 5554 456778888886543
No 233
>PF03358 FMN_red: NADPH-dependent FMN reductase; InterPro: IPR005025 NADPH-dependent FMN reductase (1.5.1.29 from EC) reduces FMN and also reduces riboflavin and FAD, although more slowly. Members of this entry catalyse the reaction NAD(P)H + FMN = NAD(P)(+) + FMNH(2).; PDB: 3SVL_B 3GFS_F 3GFQ_A 1NNI_1 2GSW_B 3GFR_D 1T0I_B 3D7N_A 2R97_A 3B6K_A ....
Probab=25.91 E-value=1e+02 Score=29.54 Aligned_cols=38 Identities=13% Similarity=0.410 Sum_probs=23.8
Q ss_pred eEEEEEccCcCCCCccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHCCCccccceeEEe
Q 003726 268 FNVVIVSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIQNQGLDVIPKILIVT 327 (800)
Q Consensus 268 ~rI~ivs~hg~~~~~~~lg~p~tGG~~vyild~araL~~eLa~~L~~~GheV~~~i~VvT 327 (800)
|||++|+ |. |...|....+. +.+++.+.+.|+++. ++-
T Consensus 1 Mkilii~--gS---------~r~~~~t~~l~-------~~~~~~l~~~g~e~~----~i~ 38 (152)
T PF03358_consen 1 MKILIIN--GS---------PRKNSNTRKLA-------EAVAEQLEEAGAEVE----VID 38 (152)
T ss_dssp -EEEEEE--SS---------SSTTSHHHHHH-------HHHHHHHHHTTEEEE----EEE
T ss_pred CEEEEEE--Cc---------CCCCCHHHHHH-------HHHHHHHHHcCCEEE----EEe
Confidence 7999996 33 33345544433 356667888899998 664
No 234
>PLN03228 methylthioalkylmalate synthase; Provisional
Probab=25.85 E-value=3.7e+02 Score=31.85 Aligned_cols=109 Identities=16% Similarity=0.218 Sum_probs=62.8
Q ss_pred ceeeeecccccCCCCCCCCCCCCCchhhhhhhhhhhcccCCCCC----chh----HHHHHhhcccCCeeeecccc-CCCH
Q 003726 122 YVLELDLEPFNATFPRPTRSSSIGNGVQFLNRHLSSVMFRNKES----LEP----LLNFLRVHKHDGFVMMLNDR-IQSI 192 (800)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~----~~~~~~~~~~~~~~~~~~~~-~~~~ 192 (800)
.+.--.+=||-.++|.++.++.-|+ +=|-+--+|.++++.+. ..| .-+|+-.--.+-+.+.|.|. +.+.
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~I~DtTLRDG 95 (503)
T PLN03228 18 TVVGRSVLPIGSSLPSLRLTRPYGK--PTLFRSCCSSESKKVATSATDLKPIVERWPEYIPNKLPDKNYVRVLDTTLRDG 95 (503)
T ss_pred ceEEEeeeecccCCCcccccCCCCC--ccHHHHHHHHhhhccccccccccchhhcccccCCcccCCCCCeEEEeCCCCCC
Confidence 4444467799999999999988776 45667778888877632 433 33444433333444555443 5554
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCc-----hhhHHHhhccCC---ccccCchHHHHHHHHHHHHH
Q 003726 193 SKLQSALQRAEEYLSKFLPDTPY-----SEFEFEIQGMGF---ERGWGDTAQRVSEMVHLLLD 247 (800)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~---~~gwg~~~~~~~~~~~~l~~ 247 (800)
.|- +..+| -++...|-++|+ |-||-..-....|.++.+..
T Consensus 96 eQ~---------------~gv~fs~eeKi~Ia~~L~~~GVd~IEvG~Pa~s~~e~e~i~~i~~ 143 (503)
T PLN03228 96 EQS---------------PGGSLTPPQKLEIARQLAKLRVDIMEVGFPGSSEEEFEAVKTIAK 143 (503)
T ss_pred CCC---------------CCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHH
Confidence 431 11111 134556777776 66775544444555555544
No 235
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=25.68 E-value=3.3e+02 Score=29.06 Aligned_cols=34 Identities=15% Similarity=0.082 Sum_probs=22.1
Q ss_pred CcEEEecCCC-CCCcHHHHHHHHcCCcEEEcCccc
Q 003726 655 RGVFVQPAFY-EAFGLTVVEAMTCGLPTFATCHGG 688 (800)
Q Consensus 655 advfV~PS~~-E~fGl~vlEAMA~GlPVIAT~~GG 688 (800)
+|++|.=... .++--++--|+.+|+|||.-+-+-
T Consensus 191 i~~lVtK~SG~~g~~eKi~AA~~lgi~vivI~RP~ 225 (248)
T PRK08057 191 IDVVVTKNSGGAGTEAKLEAARELGIPVVMIARPA 225 (248)
T ss_pred CCEEEEcCCCchhhHHHHHHHHHcCCeEEEEeCCC
Confidence 4555543222 245567778899999999887654
No 236
>PF10649 DUF2478: Protein of unknown function (DUF2478); InterPro: IPR018912 This is a family of hypothetical bacterial proteins encoded in the vicinity of molybdenum ABC transporter gene-products MobA, MobB and MobC. However the function could not be confirmed.
Probab=25.66 E-value=1.1e+02 Score=30.41 Aligned_cols=40 Identities=18% Similarity=0.385 Sum_probs=0.0
Q ss_pred HHHHHHHHccCcEEEecCC------CCCCcHHHHHHHHcCCcEEEc
Q 003726 645 GELYRYIADTRGVFVQPAF------YEAFGLTVVEAMTCGLPTFAT 684 (800)
Q Consensus 645 ~el~~~ia~aadvfV~PS~------~E~fGl~vlEAMA~GlPVIAT 684 (800)
..+.+.+.+.+|++|+.-+ -.+|--.+.+|++.|+||+++
T Consensus 84 ~~l~~al~~~~DLlivNkFGk~Ea~G~Glr~~i~~A~~~giPVLt~ 129 (159)
T PF10649_consen 84 AALRRALAEGADLLIVNKFGKQEAEGRGLRDEIAAALAAGIPVLTA 129 (159)
T ss_pred HHHHHHHhcCCCEEEEcccHHhhhcCCCHHHHHHHHHHCCCCEEEE
No 237
>COG4195 Phage-related replication protein [General function prediction only]
Probab=25.63 E-value=71 Score=32.53 Aligned_cols=32 Identities=28% Similarity=0.429 Sum_probs=24.8
Q ss_pred eEEEEEccCcCCCCccCCCCCCCCchHHHHHHHHHHHHHHHHHHH
Q 003726 268 FNVVIVSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRI 312 (800)
Q Consensus 268 ~rI~ivs~hg~~~~~~~lg~p~tGG~~vyild~araL~~eLa~~L 312 (800)
-+|+|++||| ||.+--+.++||++.++-+-.|
T Consensus 37 S~v~ilapHG-------------G~IE~GvSELare~s~e~S~yl 68 (208)
T COG4195 37 SRVLILAPHG-------------GGIEGGVSELAREFSDEYSGYL 68 (208)
T ss_pred ceEEEEeccC-------------CccCccHHHHHHHHHHHHHHHH
Confidence 4799999999 6888878888888877655433
No 238
>cd01020 TroA_b Metal binding protein TroA_b. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=25.52 E-value=3.4e+02 Score=28.94 Aligned_cols=88 Identities=14% Similarity=0.131 Sum_probs=57.2
Q ss_pred HHHHHccCcEEEecCC-CCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEECCCCHHHHHHHHHHHHHHhcCCHH
Q 003726 648 YRYIADTRGVFVQPAF-YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVAELMIEFFEKCYNDPS 726 (800)
Q Consensus 648 ~~~ia~aadvfV~PS~-~E~fGl~vlEAMA~GlPVIAT~~GG~~EiI~dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~ 726 (800)
...+.+ ||++|.--. +|+|=-.+++.+ .+.++++...++..+ -....--++.+|.+...++..|.+.+. ..||+
T Consensus 47 ~~~l~~-ADliv~~G~~lE~~~~k~~~~~-~~~~v~~~~~~~~~~-~~~~dPH~Wldp~n~~~~a~~I~~~L~--~~dP~ 121 (264)
T cd01020 47 AAKVST-ADIVVYNGGGYDPWMTKLLADT-KDVIVIAADLDGHDD-KEGDNPHLWYDPETMSKVANALADALV--KADPD 121 (264)
T ss_pred HHHHhh-CCEEEEeCCCchHHHHHHHHhc-CCceEEeeecccccC-CCCCCCceecCHhHHHHHHHHHHHHHH--HhCcc
Confidence 344554 788887543 576656666655 456666654443211 011234578899999999999999884 46888
Q ss_pred HHHHHHHHHHHHHH
Q 003726 727 HWNKISDGGLKRIY 740 (800)
Q Consensus 727 ~~~~ms~~a~~~v~ 740 (800)
..+...+++.+...
T Consensus 122 ~~~~y~~N~~~~~~ 135 (264)
T cd01020 122 NKKYYQANAKKFVA 135 (264)
T ss_pred cHHHHHHHHHHHHH
Confidence 77777777777654
No 239
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=25.44 E-value=6.8e+02 Score=25.18 Aligned_cols=120 Identities=11% Similarity=0.029 Sum_probs=65.8
Q ss_pred CCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEc-cc--ccCccChHHHH
Q 003726 572 GVKNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWI-SA--QMNRVRNGELY 648 (800)
Q Consensus 572 ~~Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~fl-G~--~~~~v~~~el~ 648 (800)
...|+..+++.+.+ ..+++.|+-++.. ..+....+.+|+.+.+..+ |. .....+..+.+
T Consensus 83 ~~~g~~~~l~~L~~-----~g~~~~i~S~~~~-------------~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~p~~~ 144 (214)
T PRK13288 83 EYETVYETLKTLKK-----QGYKLGIVTTKMR-------------DTVEMGLKLTGLDEFFDVVITLDDVEHAKPDPEPV 144 (214)
T ss_pred cCcCHHHHHHHHHH-----CCCeEEEEeCCCH-------------HHHHHHHHHcCChhceeEEEecCcCCCCCCCcHHH
Confidence 45676666666654 2578888877754 4555666777876543222 21 11123455666
Q ss_pred HHHHccCcEEEecCC---CCCCcHHHHHHHHcCCcEEEcCccc--cccccccCceEEEECCCCHHHHHHHH
Q 003726 649 RYIADTRGVFVQPAF---YEAFGLTVVEAMTCGLPTFATCHGG--PAEIIEHGVSGFHIDPYHPDQVAELM 714 (800)
Q Consensus 649 ~~ia~aadvfV~PS~---~E~fGl~vlEAMA~GlPVIAT~~GG--~~EiI~dg~~G~lv~p~d~e~lA~aI 714 (800)
..+.+.. -+.|+. .+-...=+.-|.++|+++|+-..|. ..+..+ ...-+.++ +..++.+.+
T Consensus 145 ~~~~~~~--~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~-~~~~~~i~--~~~~l~~~i 210 (214)
T PRK13288 145 LKALELL--GAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQ-YKPDFMLD--KMSDLLAIV 210 (214)
T ss_pred HHHHHHc--CCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhh-cCcCEEEC--CHHHHHHHH
Confidence 6555422 233322 1333344667789999999875552 233322 22345665 677766655
No 240
>TIGR01005 eps_transp_fam exopolysaccharide transport protein family. The model describes the exopolysaccharide transport protein family in bacteria. The transport protein is part of a large genetic locus which is associated with exopolysaccharide (EPS) biosynthesis. Detailed molecular characterization and gene fusion analysis revealed atleast seven gene products are involved in the overall regulation, which among other things, include exopolysaccharide biosynthesis, property of conferring virulence and exopolysaccharide export.
Probab=25.23 E-value=6.3e+02 Score=31.31 Aligned_cols=27 Identities=4% Similarity=-0.018 Sum_probs=17.3
Q ss_pred eccccCCCHHHHHHHHHHHHHHhhcCCCC
Q 003726 184 MLNDRIQSISKLQSALQRAEEYLSKFLPD 212 (800)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (800)
+++++|.|..+++..+. .-.|..+|.-
T Consensus 454 ~~d~~i~s~~~~~~~~g--lp~lg~iP~~ 480 (754)
T TIGR01005 454 LFSGRAMRPAPIARFAG--IDEVAMVPLA 480 (754)
T ss_pred HHhcccCCHHHHHHhcC--CCceeecccC
Confidence 36788999988876542 3455555543
No 241
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=25.22 E-value=58 Score=36.96 Aligned_cols=52 Identities=23% Similarity=0.365 Sum_probs=36.2
Q ss_pred cCCCcchHhhhhccCCceeEEEEEccCcCCCCccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHCCCccccceeEEeCC
Q 003726 250 QAPDPATLETFLGRIPMVFNVVIVSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIQNQGLDVIPKILIVTRL 329 (800)
Q Consensus 250 ~~p~~~~l~~f~~~~p~~~rI~ivs~hg~~~~~~~lg~p~tGG~~vyild~araL~~eLa~~L~~~GheV~~~i~VvTr~ 329 (800)
.+|.+..-..|-+..+..+||+|+...|+ +.. .+++.|.++|++|. +++|.
T Consensus 43 ~~~~~~~~~~~~~~~~~~~kVLVtGatG~--------------IG~-----------~l~~~Ll~~G~~V~----~l~R~ 93 (390)
T PLN02657 43 RATAAAAAQSFRSKEPKDVTVLVVGATGY--------------IGK-----------FVVRELVRRGYNVV----AVARE 93 (390)
T ss_pred cCCCccccccccccCCCCCEEEEECCCcH--------------HHH-----------HHHHHHHHCCCEEE----EEEec
Confidence 35556666667777788889988865554 332 34566788999998 88776
Q ss_pred C
Q 003726 330 I 330 (800)
Q Consensus 330 ~ 330 (800)
.
T Consensus 94 ~ 94 (390)
T PLN02657 94 K 94 (390)
T ss_pred h
Confidence 3
No 242
>COG3171 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=24.97 E-value=57 Score=30.39 Aligned_cols=32 Identities=41% Similarity=0.743 Sum_probs=26.5
Q ss_pred HhhccCCcccc----CchHHHHHHHHHHHHHhhcCC
Q 003726 221 EIQGMGFERGW----GDTAQRVSEMVHLLLDILQAP 252 (800)
Q Consensus 221 ~~~~~~~~~gw----g~~~~~~~~~~~~l~~~~~~p 252 (800)
+||+|||..-| |.+|+-+-|++..+.|-+.+|
T Consensus 25 EFQeLgF~v~~~~~eg~~ae~~dea~drFidevI~~ 60 (119)
T COG3171 25 EFQELGFSVQWSFHEGTSAEDVDEAVDRFIDEVIAP 60 (119)
T ss_pred HHHhhheeeEEEecCCccHHHHHHHHHHHHHHHHcc
Confidence 69999999999 777999999998876655554
No 243
>COG1830 FbaB DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes [Carbohydrate transport and metabolism]
Probab=24.89 E-value=4.3e+02 Score=28.60 Aligned_cols=123 Identities=14% Similarity=0.205 Sum_probs=63.9
Q ss_pred EEEEEecCCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEcccccCcc
Q 003726 563 LIFSMARLDGVKNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISAQMNRV 642 (800)
Q Consensus 563 iIl~vGRL~~~Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~~~~~v 642 (800)
.-+++|.-.+.+-+..+.+++....+..-.+-+.+..-|+...+.. ....+.......++.++|
T Consensus 116 ~~Vy~Gse~e~~~i~~~~~v~~~a~~~Gmp~v~~~YpRg~~~~~~~-~~d~~~v~~aaRlaaelG--------------- 179 (265)
T COG1830 116 ATVYVGSETEREMIENISQVVEDAHELGMPLVAWAYPRGPAIKDEY-HRDADLVGYAARLAAELG--------------- 179 (265)
T ss_pred EEEecCCcchHHHHHHHHHHHHHHHHcCCceEEEEeccCCcccccc-cccHHHHHHHHHHHHHhc---------------
Confidence 4578888777777777777777666654444444555555532210 111112222233344444
Q ss_pred ChHHHHHHHHccCcEEEecC--CCCCCcHHHHHHHHcCCcEEEcCcccccc------------ccccCceEEEE-----C
Q 003726 643 RNGELYRYIADTRGVFVQPA--FYEAFGLTVVEAMTCGLPTFATCHGGPAE------------IIEHGVSGFHI-----D 703 (800)
Q Consensus 643 ~~~el~~~ia~aadvfV~PS--~~E~fGl~vlEAMA~GlPVIAT~~GG~~E------------iI~dg~~G~lv-----~ 703 (800)
+|+.=... ..|.|-.++ -+||+|||.+ ||+.. .|+.|..|..+ .
T Consensus 180 ------------ADIiK~~ytg~~e~F~~vv---~~~~vpVvia--GG~k~~~~~~~l~~~~~ai~aGa~G~~~GRNifQ 242 (265)
T COG1830 180 ------------ADIIKTKYTGDPESFRRVV---AACGVPVVIA--GGPKTETEREFLEMVTAAIEAGAMGVAVGRNIFQ 242 (265)
T ss_pred ------------CCeEeecCCCChHHHHHHH---HhCCCCEEEe--CCCCCCChHHHHHHHHHHHHccCcchhhhhhhhc
Confidence 33332211 124443332 3678999886 34333 33456666533 4
Q ss_pred CCCHHHHHHHHHHHH
Q 003726 704 PYHPDQVAELMIEFF 718 (800)
Q Consensus 704 p~d~e~lA~aI~~~l 718 (800)
-.+++.+.++|..++
T Consensus 243 ~~~p~~m~~Ai~~Iv 257 (265)
T COG1830 243 HEDPEAMVKAIQAIV 257 (265)
T ss_pred cCChHHHHHHHHHHh
Confidence 457788888886665
No 244
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=24.37 E-value=7.2e+02 Score=26.20 Aligned_cols=99 Identities=13% Similarity=0.048 Sum_probs=48.3
Q ss_pred CCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCc---EEEcc-cccCccChHH
Q 003726 571 DGVKNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQ---FRWIS-AQMNRVRNGE 646 (800)
Q Consensus 571 ~~~Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~---V~flG-~~~~~v~~~e 646 (800)
....|+..+++.+.+ ..+++.|+-+... ..+....+.+++.+- ..+.+ ......|..+
T Consensus 101 ~~~pg~~elL~~L~~-----~g~~l~I~T~~~~-------------~~~~~~l~~~~l~~~~~d~i~~~~~~~~~KP~p~ 162 (267)
T PRK13478 101 TPIPGVLEVIAALRA-----RGIKIGSTTGYTR-------------EMMDVVVPLAAAQGYRPDHVVTTDDVPAGRPYPW 162 (267)
T ss_pred CCCCCHHHHHHHHHH-----CCCEEEEEcCCcH-------------HHHHHHHHHHhhcCCCceEEEcCCcCCCCCCChH
Confidence 334566666665543 2467777765543 223333343333221 12222 1112234555
Q ss_pred HHHHHHccCcEEEe-cCC---CCCCcHHHHHHHHcCCcEEEcCcccc
Q 003726 647 LYRYIADTRGVFVQ-PAF---YEAFGLTVVEAMTCGLPTFATCHGGP 689 (800)
Q Consensus 647 l~~~ia~aadvfV~-PS~---~E~fGl~vlEAMA~GlPVIAT~~GG~ 689 (800)
++.......+ +. |+. .+-...=+.=|-++|.++|+...|+.
T Consensus 163 ~~~~a~~~l~--~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~ 207 (267)
T PRK13478 163 MALKNAIELG--VYDVAACVKVDDTVPGIEEGLNAGMWTVGVILSGN 207 (267)
T ss_pred HHHHHHHHcC--CCCCcceEEEcCcHHHHHHHHHCCCEEEEEccCcc
Confidence 6555443222 22 221 23333445667799999999876654
No 245
>PRK13933 stationary phase survival protein SurE; Provisional
Probab=24.32 E-value=8.2e+02 Score=26.28 Aligned_cols=34 Identities=18% Similarity=0.218 Sum_probs=22.8
Q ss_pred CCCceEEEE--CC---------CCchHHHHHHHhcCCCeEEEEec
Q 003726 394 QGVPDLIIG--NY---------SDGNLVATLLSYKLGVTQCNIAH 427 (800)
Q Consensus 394 ~~~PDIIh~--h~---------~~~~lva~lla~~~gip~v~t~H 427 (800)
..+||+|++ |. ..|...|++-+...|+|-+..-.
T Consensus 85 ~~~pDLVvSGIN~G~N~g~dv~ySGTVgAA~ea~~~GiPsiA~S~ 129 (253)
T PRK13933 85 PDNIDMVISGINKGLNIGNDILYSGTVSAAIEGAIYKVPSIAVSA 129 (253)
T ss_pred CCCCCEEEECCcCCCCCCcCCccchhHHHHHHHHHcCCCeEEEEe
Confidence 458999994 22 11345667777788999876544
No 246
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=24.05 E-value=3.8e+02 Score=27.96 Aligned_cols=34 Identities=26% Similarity=0.322 Sum_probs=21.6
Q ss_pred CCceEEEECCCC--chHHHHHHHhc-CCCeEEE-EecC
Q 003726 395 GVPDLIIGNYSD--GNLVATLLSYK-LGVTQCN-IAHA 428 (800)
Q Consensus 395 ~~PDIIh~h~~~--~~lva~lla~~-~gip~v~-t~H~ 428 (800)
.+.|++.+-... .|++++.++++ +|+|.++ .+++
T Consensus 65 ~~aD~vva~t~~d~~N~i~~~la~~~~gv~~viar~~~ 102 (225)
T COG0569 65 DDADAVVAATGNDEVNSVLALLALKEFGVPRVIARARN 102 (225)
T ss_pred CcCCEEEEeeCCCHHHHHHHHHHHHhcCCCcEEEEecC
Confidence 378888854433 47777777766 8887544 4443
No 247
>PRK10360 DNA-binding transcriptional activator UhpA; Provisional
Probab=23.78 E-value=6.6e+02 Score=24.19 Aligned_cols=74 Identities=15% Similarity=0.196 Sum_probs=50.2
Q ss_pred HHHHHHHH-ccCcEEEecCC-CCCCcHHHHHHHHcCCcEEEcCcccc----ccccccCceEEEECCCCHHHHHHHHHHHH
Q 003726 645 GELYRYIA-DTRGVFVQPAF-YEAFGLTVVEAMTCGLPTFATCHGGP----AEIIEHGVSGFHIDPYHPDQVAELMIEFF 718 (800)
Q Consensus 645 ~el~~~ia-~aadvfV~PS~-~E~fGl~vlEAMA~GlPVIAT~~GG~----~EiI~dg~~G~lv~p~d~e~lA~aI~~~l 718 (800)
.+....+. ...|+++.-.. .+.-|..+++.+....|+|....-.. .+.+..|..|++..|.+.+++..+|..++
T Consensus 37 ~~~l~~~~~~~~dlvi~d~~~~~~~g~~~~~~l~~~~~vi~~s~~~~~~~~~~~~~~ga~~~i~kp~~~~~l~~~i~~~~ 116 (196)
T PRK10360 37 REALAGLPGRGVQVCICDISMPDISGLELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHTVA 116 (196)
T ss_pred HHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHccCCCEEEEECCCCHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHHH
Confidence 34444443 23577777543 34567888888877888887532222 23455688999999999999999997765
No 248
>CHL00194 ycf39 Ycf39; Provisional
Probab=23.23 E-value=60 Score=35.37 Aligned_cols=33 Identities=15% Similarity=0.458 Sum_probs=24.4
Q ss_pred eEEEEEccCcCCCCccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHCCCccccceeEEeCC
Q 003726 268 FNVVIVSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIQNQGLDVIPKILIVTRL 329 (800)
Q Consensus 268 ~rI~ivs~hg~~~~~~~lg~p~tGG~~vyild~araL~~eLa~~L~~~GheV~~~i~VvTr~ 329 (800)
|||+++...|+.|. .++++|.++||+|. +++|.
T Consensus 1 MkIlVtGatG~iG~-------------------------~lv~~Ll~~g~~V~----~l~R~ 33 (317)
T CHL00194 1 MSLLVIGATGTLGR-------------------------QIVRQALDEGYQVR----CLVRN 33 (317)
T ss_pred CEEEEECCCcHHHH-------------------------HHHHHHHHCCCeEE----EEEcC
Confidence 68888877666331 45566788999998 88876
No 249
>COG2236 Predicted phosphoribosyltransferases [General function prediction only]
Probab=23.04 E-value=1.6e+02 Score=30.35 Aligned_cols=46 Identities=28% Similarity=0.415 Sum_probs=35.2
Q ss_pred hhhHHHHHHHHHHHHHHHhCCCceEEEECCCCchHHHHHHHhcCCCe
Q 003726 375 WPYLETFAEDASNEIAAELQGVPDLIIGNYSDGNLVATLLSYKLGVT 421 (800)
Q Consensus 375 ~~yl~~f~~~~~~~ll~~~~~~PDIIh~h~~~~~lva~lla~~~gip 421 (800)
|..+.......+.++.+. +.+||+|++-.-.|...|.+++..+|+.
T Consensus 9 w~~I~~~~~~lA~kI~~s-~~~PDvIiaiaRGG~~pariLsd~L~~~ 54 (192)
T COG2236 9 WEEIHRLCRALAEKIRAS-GFKPDVIVAIARGGLIPARILSDFLGVK 54 (192)
T ss_pred HHHHHHHHHHHHHHHHHc-CCCCCEEEEEcCCceehHHHHHHHhCCC
Confidence 444555556666666643 6799999999888888999999999874
No 250
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=23.00 E-value=7.3e+02 Score=25.92 Aligned_cols=112 Identities=14% Similarity=0.155 Sum_probs=64.0
Q ss_pred CCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEE--Ecc-cccCccChHHHH
Q 003726 572 GVKNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFR--WIS-AQMNRVRNGELY 648 (800)
Q Consensus 572 ~~Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~--flG-~~~~~v~~~el~ 648 (800)
...|+..+++.+.+ ..+++.|+-++.. ..++...+.+++.+.+. +.+ ......|..+.+
T Consensus 109 l~pgv~e~L~~L~~-----~g~~l~I~Tn~~~-------------~~~~~~l~~~gl~~~Fd~iv~~~~~~~~KP~p~~~ 170 (248)
T PLN02770 109 PLNGLYKLKKWIED-----RGLKRAAVTNAPR-------------ENAELMISLLGLSDFFQAVIIGSECEHAKPHPDPY 170 (248)
T ss_pred cCccHHHHHHHHHH-----cCCeEEEEeCCCH-------------HHHHHHHHHcCChhhCcEEEecCcCCCCCCChHHH
Confidence 34566666665543 2578888887765 45666677788764332 222 122234566666
Q ss_pred HHHHccCcEEEecCC---CCCCcHHHHHHHHcCCcEEEcCccccccccccCceEEEEC
Q 003726 649 RYIADTRGVFVQPAF---YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHID 703 (800)
Q Consensus 649 ~~ia~aadvfV~PS~---~E~fGl~vlEAMA~GlPVIAT~~GG~~EiI~dg~~G~lv~ 703 (800)
.......+ +.|.. .+-...=+.-|-++|.++|+-..|...+.+.....-+.++
T Consensus 171 ~~a~~~~~--~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~ 226 (248)
T PLN02770 171 LKALEVLK--VSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIK 226 (248)
T ss_pred HHHHHHhC--CChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEec
Confidence 66554222 23321 2334455677789999999987776554443323345555
No 251
>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []. Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane
Probab=22.65 E-value=2e+02 Score=30.68 Aligned_cols=69 Identities=10% Similarity=0.175 Sum_probs=47.1
Q ss_pred HHHHHHHHccCcEEEecCCCCCCcHHHHHHHHcCC-cEEEcCc--cccccccccCceEEEECCCCHHHHHHHH
Q 003726 645 GELYRYIADTRGVFVQPAFYEAFGLTVVEAMTCGL-PTFATCH--GGPAEIIEHGVSGFHIDPYHPDQVAELM 714 (800)
Q Consensus 645 ~el~~~ia~aadvfV~PS~~E~fGl~vlEAMA~Gl-PVIAT~~--GG~~EiI~dg~~G~lv~p~d~e~lA~aI 714 (800)
.+....|+. +...++|.-..++..-+.|||++|+ |||.++. =...++|.=....+.++..+..++.+.|
T Consensus 228 ~~~~~~l~~-S~FCL~p~G~~~~s~Rl~eal~~GcIPVii~d~~~lPf~~~ldw~~fsv~v~~~~~~~l~~iL 299 (302)
T PF03016_consen 228 SEYMELLRN-SKFCLCPRGDGPWSRRLYEALAAGCIPVIISDDYVLPFEDVLDWSRFSVRVPEADLPELPEIL 299 (302)
T ss_pred hHHHHhccc-CeEEEECCCCCcccchHHHHhhhceeeEEecCcccCCcccccCHHHEEEEECHHHHHHHHHHH
Confidence 456666775 7788888777678899999999997 6665542 2235566546677888766665554444
No 252
>PF03308 ArgK: ArgK protein; InterPro: IPR005129 Bacterial periplasmic transport systems require the function of a specific substrate-binding protein, located in the periplasm, and several cytoplasmic membrane transport components. In Escherichia coli, the arginine-ornithine transport system requires an arginine-ornithine-binding protein and the lysine-arginine-ornithine (LAO) transport system includes a LAO-binding protein. Both periplasmic proteins can be phosphorylated by a single kinase, ArgK [] resulting in reduced levels of transport activity of the periplasmic transport systems that include each of the binding proteins. The ArgK protein acts as an ATPase enzyme and as a kinase.; PDB: 3MD0_A 3P32_A 2QM7_A 2QM8_A 2WWW_D 2P67_A 3NXS_A.
Probab=22.62 E-value=6e+02 Score=27.53 Aligned_cols=110 Identities=16% Similarity=0.131 Sum_probs=58.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHCCCccccceeEEeCCC--CCCCCCcccc--cceeecCCCCeEEEEeccCCCCccccc
Q 003726 292 GQVVYILDQVRALENEMLLRIQNQGLDVIPKILIVTRLI--PDAKGTTCNQ--RLERISGTEHTHILRVPFRTENGILRK 367 (800)
Q Consensus 292 G~~vyild~araL~~eLa~~L~~~GheV~~~i~VvTr~~--p~~~g~~~~~--~~e~~~g~~~v~I~rvp~~~~~~~~~~ 367 (800)
|-...+. .|...+.++|+.|- |++-.+ |-..|.--+. +.......+++.|-.++.+...|
T Consensus 41 GKSTli~--------~l~~~~~~~g~~Va----VlAVDPSSp~tGGAlLGDRiRM~~~~~d~~vfIRS~atRG~lG---- 104 (266)
T PF03308_consen 41 GKSTLID--------ALIRELRERGKRVA----VLAVDPSSPFTGGALLGDRIRMQELSRDPGVFIRSMATRGSLG---- 104 (266)
T ss_dssp SHHHHHH--------HHHHHHHHTT--EE----EEEE-GGGGCC---SS--GGGCHHHHTSTTEEEEEE---SSHH----
T ss_pred cHHHHHH--------HHHHHHhhcCCceE----EEEECCCCCCCCCcccccHHHhcCcCCCCCEEEeecCcCCCCC----
Confidence 7777888 67777889999998 665443 3333332222 34445556788888888765432
Q ss_pred cccccCChhhHHHHHHHHHHHHHHHhCCCceEEEECCCCchHHHHHHHhcCCCeEEEEecCC
Q 003726 368 WISRFDVWPYLETFAEDASNEIAAELQGVPDLIIGNYSDGNLVATLLSYKLGVTQCNIAHAL 429 (800)
Q Consensus 368 ~isr~~i~~yl~~f~~~~~~~ll~~~~~~PDIIh~h~~~~~lva~lla~~~gip~v~t~H~l 429 (800)
-+.....++..- +.. ..+|+|+...--.+-.-.-++....+.+++..-+.
T Consensus 105 ---------Gls~~t~~~v~l-l~a--aG~D~IiiETVGvGQsE~~I~~~aD~~v~v~~Pg~ 154 (266)
T PF03308_consen 105 ---------GLSRATRDAVRL-LDA--AGFDVIIIETVGVGQSEVDIADMADTVVLVLVPGL 154 (266)
T ss_dssp ---------HHHHHHHHHHHH-HHH--TT-SEEEEEEESSSTHHHHHHTTSSEEEEEEESST
T ss_pred ---------CccHhHHHHHHH-HHH--cCCCEEEEeCCCCCccHHHHHHhcCeEEEEecCCC
Confidence 222333343332 332 27999998765544444455666666666655544
No 253
>PRK13935 stationary phase survival protein SurE; Provisional
Probab=22.49 E-value=9.8e+02 Score=25.69 Aligned_cols=34 Identities=26% Similarity=0.361 Sum_probs=22.8
Q ss_pred CCCceEEEE--CC---------CCchHHHHHHHhcCCCeEEEEec
Q 003726 394 QGVPDLIIG--NY---------SDGNLVATLLSYKLGVTQCNIAH 427 (800)
Q Consensus 394 ~~~PDIIh~--h~---------~~~~lva~lla~~~gip~v~t~H 427 (800)
..+||+|++ |. ..|...|++-+...|+|-+..-.
T Consensus 84 ~~~pDLVvSGIN~G~N~g~~v~ySGTVgAA~ea~~~GiPaiA~S~ 128 (253)
T PRK13935 84 DKKVDLVISGINRGPNLGTDVLYSGTVSGALEGAMMGVPSIAISS 128 (253)
T ss_pred cCCCCEEEeCCccCCCCCcCCcccHhHHHHHHHHhcCCCeEEEEc
Confidence 458999994 22 11345666777778999877654
No 254
>COG1618 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=22.42 E-value=2.3e+02 Score=28.61 Aligned_cols=72 Identities=18% Similarity=0.261 Sum_probs=47.2
Q ss_pred HHHHHHHHccCcEEEecCC------CCCCcHHHHHHHHcCCcEEEcCc-----cccccccccCceEEE-ECCCCHHHHHH
Q 003726 645 GELYRYIADTRGVFVQPAF------YEAFGLTVVEAMTCGLPTFATCH-----GGPAEIIEHGVSGFH-IDPYHPDQVAE 712 (800)
Q Consensus 645 ~el~~~ia~aadvfV~PS~------~E~fGl~vlEAMA~GlPVIAT~~-----GG~~EiI~dg~~G~l-v~p~d~e~lA~ 712 (800)
..+-+.+.. ||+.+.--. .-.|.-.+-|.|-|++|+|||-+ +...++ .....-++ ++|.|-+.+..
T Consensus 92 ~al~rA~~~-aDvIIIDEIGpMElks~~f~~~ve~vl~~~kpliatlHrrsr~P~v~~i-k~~~~v~v~lt~~NR~~i~~ 169 (179)
T COG1618 92 PALRRALEE-ADVIIIDEIGPMELKSKKFREAVEEVLKSGKPLIATLHRRSRHPLVQRI-KKLGGVYVFLTPENRNRILN 169 (179)
T ss_pred HHHHHHhhc-CCEEEEecccchhhccHHHHHHHHHHhcCCCcEEEEEecccCChHHHHh-hhcCCEEEEEccchhhHHHH
Confidence 455666665 888886432 22366678889999999999933 333333 33333333 89999998888
Q ss_pred HHHHHH
Q 003726 713 LMIEFF 718 (800)
Q Consensus 713 aI~~~l 718 (800)
.|...+
T Consensus 170 ~Il~~L 175 (179)
T COG1618 170 EILSVL 175 (179)
T ss_pred HHHHHh
Confidence 776655
No 255
>COG2086 FixA Electron transfer flavoprotein, beta subunit [Energy production and conversion]
Probab=22.06 E-value=1.7e+02 Score=31.53 Aligned_cols=35 Identities=29% Similarity=0.303 Sum_probs=27.8
Q ss_pred CCceEEEE----CCCCchHHHHHHHhcCCCeEEEEecCC
Q 003726 395 GVPDLIIG----NYSDGNLVATLLSYKLGVTQCNIAHAL 429 (800)
Q Consensus 395 ~~PDIIh~----h~~~~~lva~lla~~~gip~v~t~H~l 429 (800)
..||+|.+ .+++++-++..+|..+|.|+++.+-.+
T Consensus 110 ~~~~LVl~G~qa~D~~t~qvg~~lAe~Lg~P~~t~v~~i 148 (260)
T COG2086 110 IGPDLVLTGKQAIDGDTGQVGPLLAELLGWPQVTYVSKI 148 (260)
T ss_pred cCCCEEEEecccccCCccchHHHHHHHhCCceeeeEEEE
Confidence 38899984 335568899999999999998876654
No 256
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=22.00 E-value=8.7e+02 Score=24.92 Aligned_cols=136 Identities=13% Similarity=0.085 Sum_probs=69.3
Q ss_pred HHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEcccccCccChHHHHHHHHccCcEEEe
Q 003726 581 ECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISAQMNRVRNGELYRYIADTRGVFVQ 660 (800)
Q Consensus 581 eA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~~~~~v~~~el~~~ia~aadvfV~ 660 (800)
..+..+.+ ..++++++..... +.+.+++++ ++|.|... .... ..+.. +++++.
T Consensus 23 rk~~~Ll~--~ga~VtVvsp~~~-------------~~l~~l~~~----~~i~~~~~---~~~~----~dl~~-~~lVi~ 75 (205)
T TIGR01470 23 RKARLLLK--AGAQLRVIAEELE-------------SELTLLAEQ----GGITWLAR---CFDA----DILEG-AFLVIA 75 (205)
T ss_pred HHHHHHHH--CCCEEEEEcCCCC-------------HHHHHHHHc----CCEEEEeC---CCCH----HHhCC-cEEEEE
Confidence 33344444 3567777765543 344455443 46888751 1111 22343 665544
Q ss_pred cCC-CCCCcHHHHHHHHcCCcEEEcCcccccc-----ccccCceEEEEC-CCCHHHHHHHHHHHHHHhcC-CHHHHHHHH
Q 003726 661 PAF-YEAFGLTVVEAMTCGLPTFATCHGGPAE-----IIEHGVSGFHID-PYHPDQVAELMIEFFEKCYN-DPSHWNKIS 732 (800)
Q Consensus 661 PS~-~E~fGl~vlEAMA~GlPVIAT~~GG~~E-----iI~dg~~G~lv~-p~d~e~lA~aI~~~l~~l~~-dp~~~~~ms 732 (800)
.+- .|-.--...+|-..|+||-+.+.....+ ++..|.--+-|. -+..-.++..|.+-++.+.. +-+.+-++.
T Consensus 76 at~d~~ln~~i~~~a~~~~ilvn~~d~~e~~~f~~pa~~~~g~l~iaisT~G~sP~la~~lr~~ie~~l~~~~~~~~~~~ 155 (205)
T TIGR01470 76 ATDDEELNRRVAHAARARGVPVNVVDDPELCSFIFPSIVDRSPVVVAISSGGAAPVLARLLRERIETLLPPSLGDLATLA 155 (205)
T ss_pred CCCCHHHHHHHHHHHHHcCCEEEECCCcccCeEEEeeEEEcCCEEEEEECCCCCcHHHHHHHHHHHHhcchhHHHHHHHH
Confidence 433 2334445667888999997776554333 344443333332 22334566666666655443 223344455
Q ss_pred HHHHHHHHHhC
Q 003726 733 DGGLKRIYERY 743 (800)
Q Consensus 733 ~~a~~~v~~~y 743 (800)
...|..+.+..
T Consensus 156 ~~~R~~~k~~~ 166 (205)
T TIGR01470 156 ATWRDAVKKRL 166 (205)
T ss_pred HHHHHHHHhhC
Confidence 55555554443
No 257
>PRK00676 hemA glutamyl-tRNA reductase; Validated
Probab=21.50 E-value=1.2e+03 Score=26.24 Aligned_cols=125 Identities=10% Similarity=-0.002 Sum_probs=67.7
Q ss_pred CCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEcccccCccChHHHH----HHHHccCcEEEecC--CC
Q 003726 591 ELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISAQMNRVRNGELY----RYIADTRGVFVQPA--FY 664 (800)
Q Consensus 591 ~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~~~~~v~~~el~----~~ia~aadvfV~PS--~~ 664 (800)
.+.+++++|.|.- -+..-+...+.|. .+|.+........+.++++ .+... +|+.+..| .-
T Consensus 173 ~~k~vLvIGaGem------------~~l~a~~L~~~g~-~~i~v~nRt~~~~~~~~~~~~~~~~~~~-~DvVIs~t~~Ta 238 (338)
T PRK00676 173 KKASLLFIGYSEI------------NRKVAYYLQRQGY-SRITFCSRQQLTLPYRTVVREELSFQDP-YDVIFFGSSESA 238 (338)
T ss_pred cCCEEEEEcccHH------------HHHHHHHHHHcCC-CEEEEEcCCccccchhhhhhhhhhcccC-CCEEEEcCCcCC
Confidence 4679999999854 2233333334554 5677776554445556554 55555 89999752 22
Q ss_pred CCCcHHHHHHHHcCCcEEEcCccccccccc--cCceEEEECCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 003726 665 EAFGLTVVEAMTCGLPTFATCHGGPAEIIE--HGVSGFHIDPYHPDQVAELMIEFFEKCYNDPSHWNKISDGGLKRI 739 (800)
Q Consensus 665 E~fGl~vlEAMA~GlPVIAT~~GG~~EiI~--dg~~G~lv~p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~a~~~v 739 (800)
-+.+....|.+..-.+-+.-|..-|+++=. ...+-.++ |.|++.+-+. +|-..+++....+...+
T Consensus 239 s~~p~i~~~~~~~~~~r~~iDLAvPRdId~v~~~~~v~Ly---~iDdL~~i~~-------~n~~~R~~~~~~ae~iI 305 (338)
T PRK00676 239 YAFPHLSWESLADIPDRIVFDFNVPRTFPWSETPFPHRYL---DMDFISEWVQ-------KHLQCRKEVNNKHKLSL 305 (338)
T ss_pred CCCceeeHHHHhhccCcEEEEecCCCCCccccccCCcEEE---EhHHHHHHHH-------HHHHHHHHHHHHHHHHH
Confidence 334554455444322246667777777631 12122344 5666665553 23344555445555444
No 258
>TIGR01012 Sa_S2_E_A ribosomal protein Sa(cytosolic)/S2(archaeal). TIGR01011 describes the related protein of organelles and bacteria.
Probab=21.39 E-value=2.1e+02 Score=29.48 Aligned_cols=104 Identities=15% Similarity=0.044 Sum_probs=58.4
Q ss_pred CCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCC-CcEEEcccccCccChHHHHHH
Q 003726 572 GVKNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLH-GQFRWISAQMNRVRNGELYRY 650 (800)
Q Consensus 572 ~~Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~-~~V~flG~~~~~v~~~el~~~ 650 (800)
-.|=...|..|+.-+.+.. .-++++||..+. ....+++.++..|-. -+=+|+| +...+.....
T Consensus 42 L~kT~~~L~~A~~~i~~i~-~~~ILfVgtk~~-----------~~~~V~~~A~~~g~~~v~~RWlg---GtLTN~~~~~- 105 (196)
T TIGR01012 42 LRKTDERLRVAAKFLVRIE-PEDILVVSARIY-----------GQKPVLKFAKVTGARAIAGRFTP---GTFTNPMQKA- 105 (196)
T ss_pred HHHHHHHHHHHHHHHHHhh-CCeEEEEecCHH-----------HHHHHHHHHHHhCCceECCeeCC---CCCCCccccc-
Confidence 3455555666665554433 568999999865 134456666665531 1227888 2233322111
Q ss_pred HHccCcEEEecCCCCCCcHHHHHHHHcCCcEEEc-Ccccccccc
Q 003726 651 IADTRGVFVQPAFYEAFGLTVVEAMTCGLPTFAT-CHGGPAEII 693 (800)
Q Consensus 651 ia~aadvfV~PS~~E~fGl~vlEAMA~GlPVIAT-~~GG~~EiI 693 (800)
+. --|+.++..- -.-...+.||...|.||||- |....+..|
T Consensus 106 ~~-~Pdlliv~dp-~~~~~Av~EA~~l~IP~Iai~DTn~dp~~v 147 (196)
T TIGR01012 106 FR-EPEVVVVTDP-RADHQALKEASEVGIPIVALCDTDNPLRYV 147 (196)
T ss_pred cC-CCCEEEEECC-ccccHHHHHHHHcCCCEEEEeeCCCCCccC
Confidence 11 1334443221 22356799999999999996 566666665
No 259
>TIGR01162 purE phosphoribosylaminoimidazole carboxylase, PurE protein. Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, an N5-CAIR mutase.
Probab=21.12 E-value=8.3e+02 Score=24.32 Aligned_cols=121 Identities=19% Similarity=0.280 Sum_probs=65.1
Q ss_pred EEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEcccccCccChHHHHHHHHc----cCcEEEecCCCCCCcHHH
Q 003726 596 VVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISAQMNRVRNGELYRYIAD----TRGVFVQPAFYEAFGLTV 671 (800)
Q Consensus 596 vIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~~~~~v~~~el~~~ia~----aadvfV~PS~~E~fGl~v 671 (800)
+|.|+..| ....++..+..+++|++-.++..+. .-..+++.++... ..++|+.-+=.++. +.-
T Consensus 3 IimGS~SD---------~~~~~~a~~~L~~~gi~~dv~V~Sa---HRtp~~~~~~~~~a~~~g~~viIa~AG~aa~-Lpg 69 (156)
T TIGR01162 3 IIMGSDSD---------LPTMKKAADILEEFGIPYELRVVSA---HRTPELMLEYAKEAEERGIKVIIAGAGGAAH-LPG 69 (156)
T ss_pred EEECcHhh---------HHHHHHHHHHHHHcCCCeEEEEECc---ccCHHHHHHHHHHHHHCCCeEEEEeCCccch-hHH
Confidence 56666655 2334555566678888888888874 3344666666642 25677765544332 223
Q ss_pred HHHHHcCCcEEEcCc-----cccc---cccc--cC--ceEEEEC-CCCHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q 003726 672 VEAMTCGLPTFATCH-----GGPA---EIIE--HG--VSGFHID-PYHPDQVAELMIEFFEKCYNDPSHWNKISDG 734 (800)
Q Consensus 672 lEAMA~GlPVIAT~~-----GG~~---EiI~--dg--~~G~lv~-p~d~e~lA~aI~~~l~~l~~dp~~~~~ms~~ 734 (800)
+=|-..-+|||+... +|.. .+++ .| ..-..++ ..|..-+|..|.. ..|++.|+++...
T Consensus 70 vva~~t~~PVIgvP~~~~~l~G~daLlS~vqmP~gvpvatv~I~~~~nAa~~AaqIl~-----~~d~~l~~kl~~~ 140 (156)
T TIGR01162 70 MVAALTPLPVIGVPVPSKALSGLDSLLSIVQMPSGVPVATVAIGNAGNAALLAAQILG-----IKDPELAEKLKEY 140 (156)
T ss_pred HHHhccCCCEEEecCCccCCCCHHHHHHHhcCCCCCeeEEEEcCChhHHHHHHHHHHc-----CCCHHHHHHHHHH
Confidence 334455778877532 2221 2333 22 1222233 2244445555533 3788888887443
No 260
>PRK02122 glucosamine-6-phosphate deaminase-like protein; Validated
Probab=20.95 E-value=1.2e+02 Score=37.17 Aligned_cols=106 Identities=23% Similarity=0.297 Sum_probs=55.7
Q ss_pred HHHHHHHHHhhcCCCC-------CCchhhHHHhhccCCccccCchHHHHHHHHHHHHHhhcC-----CCcchHhhhhccC
Q 003726 197 SALQRAEEYLSKFLPD-------TPYSEFEFEIQGMGFERGWGDTAQRVSEMVHLLLDILQA-----PDPATLETFLGRI 264 (800)
Q Consensus 197 ~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~gwg~~~~~~~~~~~~l~~~~~~-----p~~~~l~~f~~~~ 264 (800)
+-.++|.-.|+..-.. .-|.+ +.|.+|==+-||.-.+. .+.++-|..-+.- |+..+.-..-..-
T Consensus 291 ~~~~~~~~~l~~~~~k~~l~l~~~d~~~--~~~~~l~~~~g~~~~~~--~~~f~~~~~~i~~~p~g~~~~~~~~~~~~~~ 366 (652)
T PRK02122 291 KLIRRAVVWLCQKLGKPILKLTDKDYNE--NGLSDLLAQYGSAYNVN--IKVFNDLQHTITGWPGGKPNADDTNRPERAL 366 (652)
T ss_pred HHHHHHHHHHHHHhCCCcccCchhhhhh--cCHHHHHHHhCcHHHHH--HHHHHHHHHHhcCCCCCCCCcccccCCcccc
Confidence 3567788777754322 11211 12333322456644433 3455556555533 3322222222335
Q ss_pred CceeEEEEEccCcCCCCccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHCCCccccceeEEeCC
Q 003726 265 PMVFNVVIVSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIQNQGLDVIPKILIVTRL 329 (800)
Q Consensus 265 p~~~rI~ivs~hg~~~~~~~lg~p~tGG~~vyild~araL~~eLa~~L~~~GheV~~~i~VvTr~ 329 (800)
|..+||++||||-- ..++| .||.. .+|.++||+|+ |+++|.+
T Consensus 367 ~~~~rvLv~spHPD---Devi~---~GGTl---------------arl~~~G~~V~--vv~~TsG 408 (652)
T PRK02122 367 PYPKRVIIFSPHPD---DDVIS---MGGTF---------------RRLVEQGHDVH--VAYQTSG 408 (652)
T ss_pred cCCceEEEEEeCCC---chHhh---hHHHH---------------HHHHHCCCcEE--EEEecCC
Confidence 67799999999863 23443 24432 34789999999 4445543
No 261
>cd03129 GAT1_Peptidase_E_like Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E and, extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Peptidase E and cyanophycinases are thought to have a Ser-His-Glu catalytic triad which differs from
Probab=20.46 E-value=8.6e+02 Score=24.73 Aligned_cols=107 Identities=8% Similarity=0.046 Sum_probs=62.2
Q ss_pred CCCCCCHHHHHHHHHHhhccCCCeEEEEEeccCCCCCccchHHHHHHHHHHHHHHHcCCCCcEEEcccccCccChHHHHH
Q 003726 570 LDGVKNLTGLVECYGKSSKLRELVNLVVVGGYMDVKNSRDREEMAEIEKMHGLIKQYNLHGQFRWISAQMNRVRNGELYR 649 (800)
Q Consensus 570 L~~~Kgl~~LleA~~~l~~~~~~v~LvIVG~g~~~~~~~~~e~~~~~~~l~~li~~~gL~~~V~flG~~~~~v~~~el~~ 649 (800)
.++..+.+.+-+.+.... ....+++++.....+ + .++.+.+.+..+++|........- +.....++.+
T Consensus 9 ~~~~~~~~~~~~~~~~~~--~~~~~i~~iptA~~~-----~--~~~~~~~~~~~~~lG~~~~~~~~~---~~~~~~~~~~ 76 (210)
T cd03129 9 LDKAHARPILQDFLARAG--GAGARVLFIPTASGD-----R--DEYGEEYRAAFERLGVEVVHLLLI---DTANDPDVVA 76 (210)
T ss_pred cCccChHHHHHHHHHHcC--CCCCeEEEEeCCCCC-----h--HHHHHHHHHHHHHcCCceEEEecc---CCCCCHHHHH
Confidence 333334444444444432 245778888776541 1 234566777777888643322221 1134578888
Q ss_pred HHHccCcEEEecCC--------C-CC-CcHHHHHHHHcCCcEEEcCcccc
Q 003726 650 YIADTRGVFVQPAF--------Y-EA-FGLTVVEAMTCGLPTFATCHGGP 689 (800)
Q Consensus 650 ~ia~aadvfV~PS~--------~-E~-fGl~vlEAMA~GlPVIAT~~GG~ 689 (800)
.+.. +|+++++-= + +. .--.+.+....|+|++.+..|..
T Consensus 77 ~l~~-ad~I~~~GG~~~~~~~~l~~t~~~~~i~~~~~~G~v~~G~SAGA~ 125 (210)
T cd03129 77 RLLE-ADGIFVGGGNQLRLLSVLRETPLLDAILKRVARGVVIGGTSAGAA 125 (210)
T ss_pred HHhh-CCEEEEcCCcHHHHHHHHHhCChHHHHHHHHHcCCeEEEcCHHHH
Confidence 8886 888887621 1 22 22357888889999999987764
Done!