BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 003731
         (799 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|359476473|ref|XP_002266678.2| PREDICTED: auxin response factor 8-like [Vitis vinifera]
          Length = 846

 Score = 1251 bits (3237), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 645/832 (77%), Positives = 709/832 (85%), Gaps = 36/832 (4%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ KCLNSELWHACAGPLVSLPTVG+RVVYFPQGHSEQVAATTNKEVD HIPNYP+LPPQ
Sbjct: 16  GEKKCLNSELWHACAGPLVSLPTVGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPSLPPQ 75

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           LICQLHNVTMHADVETDEVYAQMTLQPL+P+EQKDTF+P+ELGIPSKQPTNYFCKTLTAS
Sbjct: 76  LICQLHNVTMHADVETDEVYAQMTLQPLTPQEQKDTFLPVELGIPSKQPTNYFCKTLTAS 135

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSVPRRAAEKVFP LDFS QPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT
Sbjct: 136 DTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 195

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAAA
Sbjct: 196 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAA 255

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 302
           HAAATNSCFT+F+NPRASPSEFVIPL+KYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG
Sbjct: 256 HAAATNSCFTIFYNPRASPSEFVIPLSKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 315

Query: 303 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 362
           TITGISDLDPVRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK
Sbjct: 316 TITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 375

Query: 363 RPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGNDH 422
           RPWHP  SS +D+RDE A+GL WLRG TG+QGL +LNFQ++GMFPW QQR++P+FLGNDH
Sbjct: 376 RPWHPGASSLHDSRDEAANGLMWLRGETGDQGLQSLNFQTVGMFPWTQQRLDPTFLGNDH 435

Query: 423 NQQYQAMLAAGMQ---SGDPVRQQFMQLQQPFQYLQQSGSQN-----PLQLKQQQHLLQQ 474
           NQQYQAMLAAG+Q   SGDP++QQ+MQ QQPFQYLQQ+GS N       Q +  Q  + Q
Sbjct: 436 NQQYQAMLAAGLQNLGSGDPLKQQYMQFQQPFQYLQQTGSNNPLLQQRQQPQVIQQTIPQ 495

Query: 475 LNSQAEDRAQQQQQPQQ----------------HMYHDALQIRTDELLQRQQSNLPSPSF 518
             S A+ +  Q   P+                 H Y ++ QI++D+L QR Q N+PS SF
Sbjct: 496 HMSHAQTQILQDNLPRHLLQQQLNNQQEQPQQQHSYQESFQIQSDQLQQRPQPNVPSLSF 555

Query: 519 SKANFMDSSTEI-SVSISPMQNMLGSL-PEGSGNLLNFS-GAGPSMLRQQFPQQSLGSKY 575
           SKA+F DS+T+  S++ S MQNMLGS+ PEGSGNLLNFS   G SML +Q PQQ   +K+
Sbjct: 556 SKADFPDSNTKFSSITPSSMQNMLGSMCPEGSGNLLNFSRTTGQSMLSEQPPQQPWATKF 615

Query: 576 EPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSF-T 634
             SQ   F +S SLP  + GKDAAV  ENCN D+QN  +FGV+IDSSGLLLPTTV SF +
Sbjct: 616 THSQFNAFANSTSLP-PFTGKDAAVEPENCNLDAQNHTLFGVNIDSSGLLLPTTVPSFGS 674

Query: 635 TSVDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGSVGRSL 694
           +SVD  VSSMPLG SGF  S++GC+QD SELL N GQ+D  TP+RTFVKVYKSGSVGRSL
Sbjct: 675 SSVDADVSSMPLGASGFQGSLFGCVQDPSELLQNAGQVDPPTPSRTFVKVYKSGSVGRSL 734

Query: 695 DISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVW 754
           DI+RFSSY+ELREELGQMFGIEGK E+PLRSGWQLVFVDRENDVLLLGDDPWEAFV+NVW
Sbjct: 735 DITRFSSYHELREELGQMFGIEGKLENPLRSGWQLVFVDRENDVLLLGDDPWEAFVNNVW 794

Query: 755 YIKILSPEDVQKMGEQGVES-FSPSSGQRANSRGNCGRDPV------GSLEY 799
           YIKILSPEDVQKMG+QG+ES FSP+S QR NS G   RD V      GSLEY
Sbjct: 795 YIKILSPEDVQKMGKQGIESGFSPNSAQRMNSSGTDDRDLVSGLPSAGSLEY 846


>gi|224079698|ref|XP_002305917.1| predicted protein [Populus trichocarpa]
 gi|222848881|gb|EEE86428.1| predicted protein [Populus trichocarpa]
          Length = 827

 Score = 1250 bits (3235), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 630/814 (77%), Positives = 695/814 (85%), Gaps = 40/814 (4%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ KCLNSELWHACAGPLVSLPT G+RVVYFPQGHSEQVAATTNKEVD+HIPNYP+LPPQ
Sbjct: 14  GEKKCLNSELWHACAGPLVSLPTAGSRVVYFPQGHSEQVAATTNKEVDAHIPNYPSLPPQ 73

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           LICQLHNVTMHADVETDEVYAQMTLQPL+P+EQK+TF+P++LG+PSKQPTNYFCKTLTAS
Sbjct: 74  LICQLHNVTMHADVETDEVYAQMTLQPLTPQEQKETFLPMDLGMPSKQPTNYFCKTLTAS 133

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSVPRRAAEKVFP LDF+ QPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT
Sbjct: 134 DTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 193

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAAA
Sbjct: 194 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAA 253

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 302
           HAAATNSCFTVF+NPRASPSEFVIPL+KYVKAVFHTR+SVGMRFRMLFETEESSVRRYMG
Sbjct: 254 HAAATNSCFTVFYNPRASPSEFVIPLSKYVKAVFHTRISVGMRFRMLFETEESSVRRYMG 313

Query: 303 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 362
           TITGISDLDPVRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK
Sbjct: 314 TITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 373

Query: 363 RPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGNDH 422
           RPWHP + S  D+RDE ++GL WLRGG+GE GL +LNFQ+  M PWMQQR++P+ LGNDH
Sbjct: 374 RPWHPGSPSLLDSRDEASNGLMWLRGGSGEPGLPSLNFQA-NMLPWMQQRLDPTMLGNDH 432

Query: 423 NQQYQAMLAAGMQ---SGDPVRQQFMQLQQPFQYLQQSGSQNP----------------- 462
           NQ+YQAMLAAGMQ   SGDP+RQQFMQLQQPFQYLQQS   NP                 
Sbjct: 433 NQRYQAMLAAGMQNLGSGDPLRQQFMQLQQPFQYLQQSSGHNPLLQLQQQQQQQAIQQSI 492

Query: 463 ----LQLKQQ-------QHLL-QQLNSQAEDRAQQQQQPQQHMYHDALQIRTDELLQRQQ 510
               LQ + Q       +HLL QQLN+Q  D+A Q     QH+YHD LQI+TD+ LQRQQ
Sbjct: 493 PHNILQAQNQISTESLPRHLLQQQLNNQPGDQAHQ----HQHIYHDGLQIQTDQ-LQRQQ 547

Query: 511 SNLPSPSFSKANFMDSSTEISVSISPMQNMLGSL-PEGSGNLLNFSGAGPSMLRQQFPQQ 569
           SNLPSPSFSK  +MDSS++ S + +PMQNMLGSL  EGS NLL+FS AG S L +Q PQQ
Sbjct: 548 SNLPSPSFSKTEYMDSSSKFSATNTPMQNMLGSLCSEGSVNLLDFSRAGQSTLTEQLPQQ 607

Query: 570 SLGSKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTT 629
           S   KY   +V  F +S+SLP +Y  KD ++  ENC++D+QN  +FG +IDSSGLLLPTT
Sbjct: 608 SWVPKYAHQEVNAFANSISLPRTYPEKDPSMEAENCSSDAQNPTLFGANIDSSGLLLPTT 667

Query: 630 VSSF-TTSVDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSG 688
           V  + T+S+D  VSSMPLGDSGF NS+YGC+QDSSELL N GQ+D  TP+ TFVKVYKSG
Sbjct: 668 VPRYSTSSIDADVSSMPLGDSGFQNSLYGCVQDSSELLSNAGQMDPPTPSGTFVKVYKSG 727

Query: 689 SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEA 748
           SVGRSLDISRFSSY+ELR EL QMFGIEGK E+P RSGWQLVFVDRENDVLLLGDDPWE 
Sbjct: 728 SVGRSLDISRFSSYHELRGELAQMFGIEGKLENPHRSGWQLVFVDRENDVLLLGDDPWEL 787

Query: 749 FVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQR 782
           FV+NVWYIKILSPEDV K+GEQGVE   P++  R
Sbjct: 788 FVNNVWYIKILSPEDVLKLGEQGVEPSGPNAVHR 821


>gi|356500980|ref|XP_003519308.1| PREDICTED: auxin response factor 8-like [Glycine max]
          Length = 846

 Score = 1232 bits (3188), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 626/834 (75%), Positives = 694/834 (83%), Gaps = 39/834 (4%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ KCLNSELWHACAGPLVSLPT GTRV YFPQGHSEQVAATTN+EVD HIPNYP+LPPQ
Sbjct: 15  GEKKCLNSELWHACAGPLVSLPTAGTRVAYFPQGHSEQVAATTNREVDGHIPNYPSLPPQ 74

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           LICQLHNVTMHADVETDEVYAQMTLQPL+P+EQKDTF+P+ELG+PSKQP+NYFCKTLTAS
Sbjct: 75  LICQLHNVTMHADVETDEVYAQMTLQPLTPQEQKDTFLPMELGVPSKQPSNYFCKTLTAS 134

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSVPRRAAEKVFP LDFS QPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT
Sbjct: 135 DTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 194

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAAA
Sbjct: 195 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAA 254

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 302
           HAAATNSCFTVF+NPRASPSEFVIPL+KY+KAV+HTRVSVGMRFRMLFETEESSVRRYMG
Sbjct: 255 HAAATNSCFTVFYNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMG 314

Query: 303 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 362
           TITGISDLDPVRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK
Sbjct: 315 TITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 374

Query: 363 RPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGNDH 422
           RPWHP TSSF+D RDE  +GL WLRGG G+Q L +LNFQ  G+ PWMQQR++P+ L NDH
Sbjct: 375 RPWHPGTSSFHDGRDEATNGLMWLRGGPGDQALNSLNFQGSGLLPWMQQRMDPTLLANDH 434

Query: 423 NQQYQAMLAAGMQ---SGDPVRQQFMQLQQPFQYLQQSGSQNP----------------- 462
           NQ YQAM A+G+Q   SGD +RQQ M  QQPF YLQQSG+ NP                 
Sbjct: 435 NQHYQAMFASGLQNLGSGDLMRQQIMNFQQPFNYLQQSGNPNPPLQLQQPQAIQQSVSSN 494

Query: 463 --LQLKQQ-------QHLLQQLNSQAEDRAQQQQQPQQHMYHDALQIRTDELLQRQQSNL 513
             LQ + Q       QHLLQ+ ++  ED+ QQQQQ Q+H Y D + +++D+L QRQ S L
Sbjct: 495 NILQPQAQVMAENLSQHLLQKSHNNREDQTQQQQQ-QRHTYQDTVLLQSDQLHQRQHSGL 553

Query: 514 PSPSFSKANFMDSSTEISVSISPMQNMLGSL-PEGSGNLLNFSGAGPSMLRQQFPQQSLG 572
           PSPS+SK +F+DSS +   S+SP QN+LGSL PEGSGNLLN S +G SML +Q PQQS  
Sbjct: 554 PSPSYSKPDFLDSSMKFPASVSPGQNILGSLCPEGSGNLLNLSRSGQSMLTEQLPQQSWA 613

Query: 573 SKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSS 632
            K+ P QV  F +SM     Y+GKD A+   +CN+D+QN ++FGV+IDSSGLLLPTTV  
Sbjct: 614 PKFTPLQVNAFGNSMQH-VQYSGKDTAMVPPHCNSDTQNPILFGVNIDSSGLLLPTTVPR 672

Query: 633 FTT-SVDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGSVG 691
           +TT S D   S+MPLG+SGF + +Y C QDSSEL+ + GQ+D    TRTFVKVYKSGSVG
Sbjct: 673 YTTASADSDASAMPLGESGFQSPLYPCGQDSSELVQSAGQVDPQNQTRTFVKVYKSGSVG 732

Query: 692 RSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVS 751
           RSLDISRFSSY+ELREEL QMFGIEGK EDPLRSGWQLVFVDRENDVLLLGDDPWE+FV+
Sbjct: 733 RSLDISRFSSYHELREELAQMFGIEGKLEDPLRSGWQLVFVDRENDVLLLGDDPWESFVN 792

Query: 752 NVWYIKILSPEDVQKMGEQGVESFSPSSGQRANSRGN------CGRDPVGSLEY 799
           NVWYIKILSPED+ KMGEQ +ES  PS GQR NS G        G   +GSLEY
Sbjct: 793 NVWYIKILSPEDIHKMGEQALESLGPSPGQRLNSTGADSHEIVSGLPSIGSLEY 846


>gi|224134659|ref|XP_002327459.1| predicted protein [Populus trichocarpa]
 gi|222836013|gb|EEE74434.1| predicted protein [Populus trichocarpa]
          Length = 799

 Score = 1229 bits (3180), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 630/812 (77%), Positives = 689/812 (84%), Gaps = 49/812 (6%)

Query: 1   MIGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLP 60
           MIG+ KCLNSELWHACAGPLVSLPT+G+RVVYFPQGHSEQVAATTNKEVD+HIPNYP+LP
Sbjct: 1   MIGEKKCLNSELWHACAGPLVSLPTMGSRVVYFPQGHSEQVAATTNKEVDAHIPNYPSLP 60

Query: 61  PQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLT 120
           PQLICQLHNVTMHADVETDEVYAQMTLQPL+P+EQK+TF+P++LG+PSKQPTNYFCKTLT
Sbjct: 61  PQLICQLHNVTMHADVETDEVYAQMTLQPLTPQEQKETFLPLDLGMPSKQPTNYFCKTLT 120

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
           ASDTSTHGGFSVPRRAAEKVFP LDF+ QPPAQELIARDLHDVEWKFRHIFRGQPKRHLL
Sbjct: 121 ASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 240
           TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAA
Sbjct: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAA 240

Query: 241 AAHAAATNSCFTVFFNPR-ASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRR 299
           AAHAAATNSCFTVF+NPR ASPSEFVIPL+KYVKAVFH RVSVGMRFRMLFETEESSVRR
Sbjct: 241 AAHAAATNSCFTVFYNPRWASPSEFVIPLSKYVKAVFHIRVSVGMRFRMLFETEESSVRR 300

Query: 300 YMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL 359
           YMGTITG SDLDPVRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLT+FPMYPSLFPL
Sbjct: 301 YMGTITGTSDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTSFPMYPSLFPL 360

Query: 360 RLKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLG 419
           RLKRPWHP +SS     DE ++GL WLRGG+GEQGL +LNFQ+  M PWMQQR++P+ LG
Sbjct: 361 RLKRPWHPGSSSL---LDEASNGLIWLRGGSGEQGLPSLNFQA-NMLPWMQQRLDPTMLG 416

Query: 420 NDHNQQYQAMLAAGMQS---GDPVRQQFMQLQQPFQYLQQSGSQNP-------------- 462
           NDHNQQYQAMLAAGMQ+   GDP+RQQFMQLQQPFQY QQS S NP              
Sbjct: 417 NDHNQQYQAMLAAGMQNLGGGDPLRQQFMQLQQPFQYPQQSSSPNPLLQLQQQHQAMQQS 476

Query: 463 -----LQLKQQ-------QHLL-QQLNSQAEDRAQQQQQPQQHMYHDALQIRTDELLQRQ 509
                LQ + Q       +HLL QQLN+Q +D+AQQ     QH YHD L I+TD LLQRQ
Sbjct: 477 IPHNILQPQNQISSDSLPRHLLQQQLNNQPDDQAQQ----HQHAYHDGLHIQTD-LLQRQ 531

Query: 510 QSNLPSPSFSKANFMDSSTEISVSISPMQNMLGSL-PEGSGNLLNFSGAGPSMLRQQFPQ 568
           QSNLPSPSFSK  +MDSS + +VS +PMQN+LGSL  EGSGNLL+F+ AG S L +Q PQ
Sbjct: 532 QSNLPSPSFSKTEYMDSSPKFTVSTTPMQNILGSLCTEGSGNLLDFTRAGQSTLTEQLPQ 591

Query: 569 QSLGSKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPT 628
           QS   KY    V  F +S+SLP +Y  KD +V  ENCN+D+QN   F       GLLLPT
Sbjct: 592 QSWVPKYAHHDVNAFSNSLSLPRTYPEKDLSVEAENCNSDAQNPTFF-------GLLLPT 644

Query: 629 TVSSF-TTSVDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKS 687
           TV  + T++VD  VSSMPLGDSGF NS+YGC+QDSSELL N GQ+D  TP+RTFVKVYKS
Sbjct: 645 TVPRYPTSTVDTDVSSMPLGDSGFQNSLYGCVQDSSELLPNAGQMDPPTPSRTFVKVYKS 704

Query: 688 GSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWE 747
           GSVGRSLDISRFSSY+ELREEL QMFGIEGK E+P RSGWQLVFVDRENDVLLLGDDPWE
Sbjct: 705 GSVGRSLDISRFSSYHELREELAQMFGIEGKLENPHRSGWQLVFVDRENDVLLLGDDPWE 764

Query: 748 AFVSNVWYIKILSPEDVQKMGEQGVESFSPSS 779
            FV+NVWYIKILSPEDV KMGEQG ES  P++
Sbjct: 765 LFVNNVWYIKILSPEDVLKMGEQGFESSGPNA 796


>gi|356553218|ref|XP_003544955.1| PREDICTED: auxin response factor 8-like [Glycine max]
          Length = 842

 Score = 1221 bits (3159), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 620/829 (74%), Positives = 692/829 (83%), Gaps = 33/829 (3%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ KCLNSELWHACAGPLVSLPT GTRVVYFPQGHSEQVAATTN+EVD HIPNYP+LPPQ
Sbjct: 15  GEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNREVDGHIPNYPSLPPQ 74

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           L+CQLHNVTMHADVETDEVYAQMTLQPL+P+EQKDTF+P+ELG+PSKQP+NYFCKTLTAS
Sbjct: 75  LVCQLHNVTMHADVETDEVYAQMTLQPLTPQEQKDTFLPMELGVPSKQPSNYFCKTLTAS 134

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSVPRRAAEKVFP LDFS QPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT
Sbjct: 135 DTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 194

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAAA
Sbjct: 195 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAA 254

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 302
           HAAATNSCFTVF+NPRASPSEFVIPL+KY+KAV+HTRVSVGMRFRMLFETEESSVRRYMG
Sbjct: 255 HAAATNSCFTVFYNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMG 314

Query: 303 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 362
           TITGISDLDPVRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK
Sbjct: 315 TITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 374

Query: 363 RPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGNDH 422
           RPWHP TSSF+D RDE  +GL WLRGG G+Q L +LNFQ  G+ PWMQQR++P+ LGNDH
Sbjct: 375 RPWHPGTSSFHDGRDEATNGLMWLRGGPGDQALNSLNFQGSGLLPWMQQRMDPTLLGNDH 434

Query: 423 NQQYQAMLAAGMQ---SGDPVRQQFMQLQQPFQYLQQSGSQN-PLQLKQQQHLLQQLNS- 477
           NQQYQAM A+G+Q   SGD +RQQ M  QQPF YLQQSG+ N PLQL+Q Q + Q ++S 
Sbjct: 435 NQQYQAMFASGLQNLGSGDLMRQQMMNFQQPFNYLQQSGNPNLPLQLQQPQAVQQSVSSN 494

Query: 478 -----QAEDRAQQQQQPQQHMYHD--------------ALQIRTDELLQRQQSNLPSPSF 518
                QA+  A+   Q  Q  +++               + +++D+L QRQ S LPSPS+
Sbjct: 495 NILQPQAQVLAENLSQHLQKSHNNREDQTQQQQHTYQDTVLLQSDQLHQRQHSGLPSPSY 554

Query: 519 SKANFMDSSTEISVSISPMQNMLGSL-PEGSGNLLNFSGAGPSMLRQQFPQQSLGSKYEP 577
           SK +F+DSS +   S+SP QNMLGSL PEGSGNLLN S +  SML +Q PQQS   K+ P
Sbjct: 555 SKPDFLDSSMKFPASVSPGQNMLGSLCPEGSGNLLNLSRSSQSMLTEQLPQQSWAPKFTP 614

Query: 578 SQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFTT-S 636
            Q+  F +SM     Y+GKD A+   +CN DSQN ++FGV+IDSSGLLLPTTV  +TT S
Sbjct: 615 LQINAFGNSMQH-VQYSGKDTAMVPPHCNPDSQNPILFGVNIDSSGLLLPTTVPRYTTAS 673

Query: 637 VDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGSVGRSLDI 696
            +   S+MP+G+SGF + +Y C+QDSSEL+ + GQ+D    TRTFVKVYKSGSVGRSLDI
Sbjct: 674 AEIDASAMPIGESGFQSPLYPCVQDSSELVQSAGQVDPQNQTRTFVKVYKSGSVGRSLDI 733

Query: 697 SRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYI 756
           SRFSSY+ELREEL QMFGIEGK EDPLRSGWQLVFVDRENDVLLLGDDPWE+FV+NVWYI
Sbjct: 734 SRFSSYHELREELAQMFGIEGKLEDPLRSGWQLVFVDRENDVLLLGDDPWESFVNNVWYI 793

Query: 757 KILSPEDVQKMGEQGVESFSPSSGQRANSRGN------CGRDPVGSLEY 799
           KILSPED+ KMGEQ VES  PSSG R NS G        G   +GSLEY
Sbjct: 794 KILSPEDIHKMGEQAVESLGPSSGHRLNSTGADSHEIVSGLPSIGSLEY 842


>gi|357491655|ref|XP_003616115.1| Auxin response factor [Medicago truncatula]
 gi|355517450|gb|AES99073.1| Auxin response factor [Medicago truncatula]
          Length = 841

 Score = 1215 bits (3143), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 615/828 (74%), Positives = 687/828 (82%), Gaps = 33/828 (3%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ KCLNSELWHACAGPLVSLPT GTRVVYFPQGHSEQV+ATTN+E+D  IPNYP+LPPQ
Sbjct: 16  GEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVSATTNREIDGQIPNYPSLPPQ 75

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           LICQLHNVTMHADVETDEVYAQMTLQPL+P+EQKDTF+P+ELGIPSKQPTNYFCKTLTAS
Sbjct: 76  LICQLHNVTMHADVETDEVYAQMTLQPLTPQEQKDTFLPMELGIPSKQPTNYFCKTLTAS 135

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSVPRRAAEKVFP LDFS QPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT
Sbjct: 136 DTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 195

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAAA
Sbjct: 196 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAA 255

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 302
           HAAATNSCFTVFFNPRASPSEFVIPL+KY+KAV+HTRVSVGMRFRMLFETEESSVRRYMG
Sbjct: 256 HAAATNSCFTVFFNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMG 315

Query: 303 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 362
           TIT ISD+DPVRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK
Sbjct: 316 TITSISDMDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 375

Query: 363 RPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGNDH 422
           RPWHP TSSF D RDE  +GL W+RGG G+ GL  +NFQ  G+ PWMQ R++P+ LGNDH
Sbjct: 376 RPWHPGTSSFLDGRDEATNGLMWMRGGPGDHGLNAMNFQGAGLLPWMQPRLDPTLLGNDH 435

Query: 423 NQQYQAML-AAGMQSG---DPVRQQFMQLQQPFQYLQQSGSQNPLQLK------------ 466
           NQQYQAML AAG+Q+    D +RQQ M  QQPF Y QQSG+ +P+QL+            
Sbjct: 436 NQQYQAMLAAAGLQNQGNVDLLRQQMMNFQQPFNY-QQSGNLSPMQLQQQQAIQQSVSTN 494

Query: 467 -----QQQHLLQQLNSQAEDRAQ--QQQQPQQHMYHDALQIRTDELLQRQQSNLPSPSFS 519
                Q Q L + L+     ++   ++ Q QQH Y D++ I+ D L Q+Q S+LPSPS++
Sbjct: 495 NIMQPQGQGLAENLSQHILQKSHNNRENQTQQHSYQDSVLIQGDPLHQKQHSSLPSPSYT 554

Query: 520 KANFMDSSTEISVSISPMQNMLGSL-PEGSGNLLNFSGAGPSMLRQQFPQQSLGSKYEPS 578
           K +F+DS  + + S+SP QNMLGSL  EGSGNLLN S +G SML +Q PQQS  SKY PS
Sbjct: 555 KPDFIDSGMKFTASVSPGQNMLGSLSSEGSGNLLNLSRSGHSMLTEQSPQQSWASKYSPS 614

Query: 579 QVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFTT-SV 637
           QV    +SMS    Y+G+D ++   +C++D+QNSV+FGV+IDSSGLLLPTTV  +TT S 
Sbjct: 615 QVDAIGNSMSH-VQYSGRDTSIVPPHCSSDAQNSVLFGVNIDSSGLLLPTTVPRYTTASA 673

Query: 638 DPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGSVGRSLDIS 697
               S+MPLG+S F  S Y CMQDSSELL + GQ+D    T  FVKVYKSGSVGRSLDIS
Sbjct: 674 HADASTMPLGESSFQGSPYPCMQDSSELLQSAGQVDAQNQTPIFVKVYKSGSVGRSLDIS 733

Query: 698 RFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIK 757
           RF+SY+ELREEL QMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWE+FV+NVWYIK
Sbjct: 734 RFNSYHELREELAQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWESFVNNVWYIK 793

Query: 758 ILSPEDVQKMGEQGVESFSPSSGQRANSRGNCGRDPV------GSLEY 799
           ILSPED+QKMGE+ +ES  PSSGQR N+ G    D V      GSLEY
Sbjct: 794 ILSPEDIQKMGEEAIESLGPSSGQRMNNTGAESHDIVSGLPSLGSLEY 841


>gi|356539752|ref|XP_003538358.1| PREDICTED: auxin response factor 8-like [Glycine max]
          Length = 843

 Score = 1213 bits (3138), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 613/830 (73%), Positives = 683/830 (82%), Gaps = 34/830 (4%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ KCLNSELWHACAGPLVSLPT GTRVVYFPQGHSEQVAATTN+E+D HIPNYP+LPPQ
Sbjct: 15  GEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNREIDGHIPNYPSLPPQ 74

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           LICQLHN+TMHADVETDEVYAQMTLQPL+P+EQKDTF+P+ELGIPSKQP+NYFCKTLTAS
Sbjct: 75  LICQLHNITMHADVETDEVYAQMTLQPLTPQEQKDTFLPMELGIPSKQPSNYFCKTLTAS 134

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSVPRRAAEKVFP LDFS QPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT
Sbjct: 135 DTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 194

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWS+FVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAAA
Sbjct: 195 GWSIFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAA 254

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 302
           HAAATNSCFTVF+NPRASPSEFVIPL+KY+KAV+HTR+SVGMRFRMLFETEESSVRRYMG
Sbjct: 255 HAAATNSCFTVFYNPRASPSEFVIPLSKYIKAVYHTRISVGMRFRMLFETEESSVRRYMG 314

Query: 303 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 362
           TITGISDLD VRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK
Sbjct: 315 TITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 374

Query: 363 RPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSL-GMFPWMQQRVEPSFLGND 421
           RPWHP TSS +D RDE  +GL WLRGG  +QGL +LNFQ   GM PWMQQR++P+ LGND
Sbjct: 375 RPWHPGTSSLHDGRDEATNGLMWLRGGPVDQGLNSLNFQGAGGMLPWMQQRLDPTLLGND 434

Query: 422 HNQQYQAMLAAGMQ---SGDPVRQQFMQLQQPFQYLQQSGSQNPL--------------- 463
            NQQYQAMLAAG+Q   SG  ++QQ M  QQP+ YLQQSG+ N                 
Sbjct: 435 QNQQYQAMLAAGLQNLGSGYLMKQQLMNFQQPYHYLQQSGNSNSPLQLQQQQPIQQSVSS 494

Query: 464 -QLKQQQHLL-----QQLNSQAEDRAQQQQQPQQHMYHDALQIRTDELLQRQQSNLPSPS 517
             L+ Q H+L     Q L  +  +  + Q Q QQH Y D+L I  D+L QRQ S +PS S
Sbjct: 495 NMLQPQTHVLTENLSQHLLQKPHNNQEVQAQQQQHTYQDSLSILGDQLHQRQHSGIPSSS 554

Query: 518 FSKANFMDSSTEISVSISPMQNMLGSL-PEGSGNLLNFSGAGPSMLRQQFPQQSLGSKYE 576
           +SK +F+DSS +   S+SP QNML SL PEGSG+LLN S +G S+L +Q PQQ    KY 
Sbjct: 555 YSKPDFLDSSMKFPASVSPGQNMLSSLCPEGSGSLLNLSRSGQSLLTEQLPQQQWTQKYA 614

Query: 577 PSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFTT- 635
           P QV  +  ++S P  Y+GKD+ +   +CN+D+QNS +FGV+IDSSGLLLPTTV  +TT 
Sbjct: 615 PVQVNAYGSTVSHP-QYSGKDSVMVLPHCNSDAQNSTLFGVNIDSSGLLLPTTVPGYTTS 673

Query: 636 SVDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGSVGRSLD 695
           S D   S+MPL +SGF  S+YGCMQDSSELL + G  D    T+TFVKVYKSGSVGRSLD
Sbjct: 674 SADTNSSTMPLAESGFQGSLYGCMQDSSELLQSAGHTDPENQTQTFVKVYKSGSVGRSLD 733

Query: 696 ISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWY 755
           ISRFSSY+ELREEL QMFGIEGK EDPLRSGWQLVFVDRENDVLLLGDDPWE+FV+NVWY
Sbjct: 734 ISRFSSYHELREELAQMFGIEGKLEDPLRSGWQLVFVDRENDVLLLGDDPWESFVNNVWY 793

Query: 756 IKILSPEDVQKMGEQGVESFSPSSGQRANSRGNCGRD------PVGSLEY 799
           IKILSPED+QKMG+Q VES +  SGQR N  G   +D       +GSLEY
Sbjct: 794 IKILSPEDIQKMGDQAVESLALGSGQRLNGTGAESQDIVSGPPSIGSLEY 843


>gi|255570473|ref|XP_002526195.1| Auxin response factor, putative [Ricinus communis]
 gi|223534499|gb|EEF36199.1| Auxin response factor, putative [Ricinus communis]
          Length = 826

 Score = 1210 bits (3130), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 634/813 (77%), Positives = 699/813 (85%), Gaps = 36/813 (4%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ KCLNSELWHACAGPLVSLPTVG+RVVYFPQGHSEQVAATTNKEVD HIPNYP+LPPQ
Sbjct: 15  GEKKCLNSELWHACAGPLVSLPTVGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPSLPPQ 74

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           LICQLHNVTMHADVETDEVYAQMTLQPL+P+EQKDTF+P+ELG+PSKQPTNYFCKTLTAS
Sbjct: 75  LICQLHNVTMHADVETDEVYAQMTLQPLTPQEQKDTFLPMELGMPSKQPTNYFCKTLTAS 134

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSVPRRAAEKVFP LDFS QPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT
Sbjct: 135 DTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 194

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAAA
Sbjct: 195 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAA 254

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 302
           HAAATNSCFT+F+NPRASPSEFVIPL+KYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG
Sbjct: 255 HAAATNSCFTIFYNPRASPSEFVIPLSKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 314

Query: 303 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 362
           TITGISDLDPVRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRL+
Sbjct: 315 TITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLR 374

Query: 363 RPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGNDH 422
           RPWHP  SS +DNRDE  +GL WLRGGTG+QGL +LNFQ++ MFPW QQR++P+ LGND 
Sbjct: 375 RPWHPGPSSLHDNRDEAGNGLMWLRGGTGDQGLHSLNFQAVNMFPWSQQRLDPALLGNDQ 434

Query: 423 NQQYQAMLAAGMQ---SGDPVRQQFMQLQQPFQYLQQSGSQNP----------------- 462
           NQ YQAMLA+G+Q   +GDP+RQQFMQ QQPFQYLQQS S  P                 
Sbjct: 435 NQWYQAMLASGLQNGGNGDPLRQQFMQFQQPFQYLQQSSSHYPLLQLQQQHQAIQQSTSH 494

Query: 463 --LQLKQQ-------QHLL-QQLNSQAEDRAQQQQQPQQHMYHDALQIRTDELLQRQQSN 512
             LQ + Q       +HLL QQL++Q E++AQQQQQ QQH YHDALQ++ ++ LQRQQSN
Sbjct: 495 SILQAQNQISTESLPRHLLQQQLSNQPENQAQQQQQQQQHNYHDALQMQGEQ-LQRQQSN 553

Query: 513 LPSPSFSKANFMDSSTEISVSISPMQNMLGSL-PEGSGNLLNFSGAGPSM---LRQQFPQ 568
           +PSPSFSK +FMD   + S S +P+QNMLGSL  EGSGNLL+F+  G S    L +Q PQ
Sbjct: 554 VPSPSFSKTDFMDPGNKFSASTTPIQNMLGSLCAEGSGNLLDFTRTGQSTLTSLTEQLPQ 613

Query: 569 QSLGSKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPT 628
           QS   KY  SQ   F +S+SLP SY+ KD ++  E+CN D+ N+  FGV+IDSSGLLLPT
Sbjct: 614 QSWVPKYAHSQTNAFGNSVSLPRSYSEKDPSIEPEHCNLDAPNATNFGVNIDSSGLLLPT 673

Query: 629 TVSSF-TTSVDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKS 687
           TV  F T+SVD  VSSMP+GDSGF +S+YG +QDSSELL + GQ+D  T +RTFVKVYK 
Sbjct: 674 TVPRFSTSSVDADVSSMPIGDSGFQSSIYGGVQDSSELLPSAGQVDPPTLSRTFVKVYKL 733

Query: 688 GSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWE 747
           GSVGRSLDISRFSSY+ELREEL QMFGIEGK E+P RSGWQLVFVDRENDVLLLGDDPWE
Sbjct: 734 GSVGRSLDISRFSSYHELREELAQMFGIEGKLENPHRSGWQLVFVDRENDVLLLGDDPWE 793

Query: 748 AFVSNVWYIKILSPEDVQKMGEQGVESFSPSSG 780
           AFV+NVWYIKILSPEDVQKMGEQGV+SFS + G
Sbjct: 794 AFVNNVWYIKILSPEDVQKMGEQGVDSFSQNIG 826


>gi|449506738|ref|XP_004162834.1| PREDICTED: auxin response factor 8-like [Cucumis sativus]
          Length = 854

 Score = 1192 bits (3085), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 612/844 (72%), Positives = 680/844 (80%), Gaps = 52/844 (6%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ KCLNSELWHACAGPLVSLPT GTRVVYFPQGHSEQVAATTNKEVD HIPNYPNLPPQ
Sbjct: 16  GEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNKEVDGHIPNYPNLPPQ 75

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           LICQLHNVTMHA VETDEVYAQMTLQPL+ +EQKDTF+P+ELGIPS+QPTNYFCKTLTAS
Sbjct: 76  LICQLHNVTMHAVVETDEVYAQMTLQPLTAQEQKDTFLPMELGIPSRQPTNYFCKTLTAS 135

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSVPRRAAEKVFP LDFS QPPAQELIA+DLHD+EWKFRHIFRGQPKRHLLTT
Sbjct: 136 DTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIAKDLHDIEWKFRHIFRGQPKRHLLTT 195

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAAA
Sbjct: 196 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAA 255

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 302
           HAAATNSCFTVF+NPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG
Sbjct: 256 HAAATNSCFTVFYNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 315

Query: 303 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 362
           TITGISDLDPVRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK
Sbjct: 316 TITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 375

Query: 363 RPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGNDH 422
           RPWHP  SS +DNR++ ++GL WLRGG GEQGL +LN QS+   PW+QQR++ S  GNDH
Sbjct: 376 RPWHPGVSSVHDNREDASNGLMWLRGGVGEQGLHSLNLQSVSSLPWLQQRLDSSMFGNDH 435

Query: 423 NQQYQAMLAAGMQS---GDPVRQQFMQLQQPFQYLQQSG--------------------- 458
           NQQYQAMLAAGM +    D +RQQ M LQQPFQY+ Q+G                     
Sbjct: 436 NQQYQAMLAAGMPNLGGVDMLRQQIMHLQQPFQYIPQAGFHNSLLQMQQQQQQQQQQQQQ 495

Query: 459 -------SQNPLQLKQQ-------QHLLQQ-LNSQAEDRAQQQQQPQQHMYHDALQIRTD 503
                   QN LQ   Q       QH+LQQ L +Q ED   Q    QQH YHD +Q++++
Sbjct: 496 QLVQHSMPQNILQAPSQVMAENLPQHILQQTLQNQPEDLPNQ----QQHTYHDTIQVQSN 551

Query: 504 ELLQRQQSNLPSPSFSKANFMDSSTEISVSISPMQNMLG-SLPEGSGNLLNFSGAGPSML 562
           +  Q   SN+PSP+F + + MDS+T  S SI+  +N+L  S  EG+GNL     +G S+L
Sbjct: 552 QFHQGGHSNVPSPTFPRTDLMDSNTSYSESITSRRNILASSCAEGTGNLSTIYRSGQSIL 611

Query: 563 RQQFPQQSLGSKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSS 622
            +  PQQS  SK   SQV    +SMS P  ++G+D+ +   NCN+DS +  +FGV+IDSS
Sbjct: 612 TEHLPQQSPVSKNAHSQVDAHPNSMSFP-PFSGRDSILELGNCNSDSPSPTLFGVNIDSS 670

Query: 623 GLLLPTTVSSFTT-SVDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTF 681
           GLLLP+ V ++T+ S+ P  SSMPLGDSGF NS+Y C+QDSSELLHN GQ+D   PTRTF
Sbjct: 671 GLLLPSNVPTYTSPSIGPDSSSMPLGDSGFQNSLYSCVQDSSELLHNSGQVDPSNPTRTF 730

Query: 682 VKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKF-EDPLRSGWQLVFVDRENDVLL 740
           VKVYK+GSVGRSLDISRFSSY ELREEL QMFGIEG+  EDP RSGWQLVFVDRENDVLL
Sbjct: 731 VKVYKTGSVGRSLDISRFSSYQELREELAQMFGIEGQLVEDPRRSGWQLVFVDRENDVLL 790

Query: 741 LGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANSRGN-----CGRDPVG 795
           LGDDPWEAFV+NV +IKILSPED QK+GEQ +ESF+P  GQR  S GN      G   VG
Sbjct: 791 LGDDPWEAFVNNVGFIKILSPEDFQKLGEQAIESFNPIVGQRLTSGGNEAGNVSGLPSVG 850

Query: 796 SLEY 799
           SLEY
Sbjct: 851 SLEY 854


>gi|449462367|ref|XP_004148912.1| PREDICTED: auxin response factor 8-like [Cucumis sativus]
          Length = 836

 Score = 1184 bits (3062), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 610/826 (73%), Positives = 677/826 (81%), Gaps = 34/826 (4%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ KCLNSELWHACAGPLVSLPT GTRVVYFPQGHSEQVAATTNKEVD HIPNYPNLPPQ
Sbjct: 16  GEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNKEVDGHIPNYPNLPPQ 75

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           LICQLHNVTMHADVETDEVYAQMTLQPL+ +EQKDTF+P+ELGIPS+QPTNYFCKTLTAS
Sbjct: 76  LICQLHNVTMHADVETDEVYAQMTLQPLTAQEQKDTFLPMELGIPSRQPTNYFCKTLTAS 135

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSVPRRAAEKVFP LDFS QPPAQELIA+DLHD+EWKFRHIFRGQPKRHLLTT
Sbjct: 136 DTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIAKDLHDIEWKFRHIFRGQPKRHLLTT 195

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAAA
Sbjct: 196 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAA 255

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 302
           HAAATNSCFTVF+NPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG
Sbjct: 256 HAAATNSCFTVFYNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 315

Query: 303 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 362
           TITGISDLDPVRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK
Sbjct: 316 TITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 375

Query: 363 RPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGNDH 422
           RPWHP  SS +DNR++ ++GL WLRGG GEQGL +LN QS+   PW+QQR++ S  GNDH
Sbjct: 376 RPWHPGVSSVHDNREDASNGLMWLRGGVGEQGLHSLNLQSVSSLPWLQQRLDSSMFGNDH 435

Query: 423 NQQYQAMLAAGMQS---GDPVRQQFMQL----------QQPFQYLQQSGSQNPLQLKQQ- 468
           NQQYQAMLAAGM +    D +RQQ M L          QQ  Q +Q S  QN LQ   Q 
Sbjct: 436 NQQYQAMLAAGMPNLGGVDMLRQQIMHLQQPFQYIPQQQQQQQLVQHSMPQNILQAPSQV 495

Query: 469 ------QHLLQQ-LNSQAEDRAQQQQQPQQHMYHDALQIRTDELLQRQQSNLPSPSFSKA 521
                 QH+LQQ L +Q ED   Q    QQH YHD +Q+++++  Q   SN+PSP+F + 
Sbjct: 496 MAENLPQHILQQTLQNQPEDLPNQ----QQHTYHDTIQVQSNQFHQGGHSNVPSPTFPRT 551

Query: 522 NFMDSSTEISVSISPMQNMLG-SLPEGSGNLLNFSGAGPSMLRQQFPQQSLGSKYEPSQV 580
           + MDS+T  S SI+  +N+L  S  EG+GNL     +G S+L +  PQQS  SK   SQV
Sbjct: 552 DLMDSNTSYSESITSRRNILASSCAEGTGNLSTIYRSGQSILTEHLPQQSPVSKNAHSQV 611

Query: 581 RDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFTT-SVDP 639
               +SMS P  ++G+D+ +   NCN+DS +  +FGV+IDSSGLLLP+ V ++T+ S+ P
Sbjct: 612 DAHPNSMSFP-PFSGRDSILELRNCNSDSPSPTLFGVNIDSSGLLLPSNVPTYTSPSIGP 670

Query: 640 GVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRF 699
             SSMPLGDSGF NS+Y C+QDSSELLHN GQ+D   PTRTFVKVYK+GSVGRSLDISRF
Sbjct: 671 DSSSMPLGDSGFQNSLYSCVQDSSELLHNSGQVDPSNPTRTFVKVYKTGSVGRSLDISRF 730

Query: 700 SSYNELREELGQMFGIEGKF-EDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKI 758
           SSY ELREEL QMFGIEG+  EDP RSGWQLVFVDRENDVLLLGDDPWEAFV+NV +IKI
Sbjct: 731 SSYQELREELAQMFGIEGQLVEDPRRSGWQLVFVDRENDVLLLGDDPWEAFVNNVGFIKI 790

Query: 759 LSPEDVQKMGEQGVESFSPSSGQRANSRGN-----CGRDPVGSLEY 799
           LSPED QK+GEQ +ESF+P  GQR  S GN      G   VGSLEY
Sbjct: 791 LSPEDFQKLGEQAIESFNPIVGQRLTSGGNEAGNVSGLPSVGSLEY 836


>gi|356569910|ref|XP_003553137.1| PREDICTED: auxin response factor 8-like [Glycine max]
          Length = 841

 Score = 1183 bits (3061), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 610/829 (73%), Positives = 682/829 (82%), Gaps = 35/829 (4%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ KCLNSELWHACAGPLVSLPT GTRVVYFPQGHSEQVAATTN+E+D HIPNYP+LPPQ
Sbjct: 16  GEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNREIDGHIPNYPSLPPQ 75

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           LICQLHNVTMHADVETDEVYAQMTLQPL+P+EQKDTF+ +ELGIPSKQP+NYFCKTLTAS
Sbjct: 76  LICQLHNVTMHADVETDEVYAQMTLQPLTPQEQKDTFLSMELGIPSKQPSNYFCKTLTAS 135

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSVPRRAAEKVFP LDFSLQPPAQELIARDLHD EWKFRHIFRGQPKRHLLTT
Sbjct: 136 DTSTHGGFSVPRRAAEKVFPPLDFSLQPPAQELIARDLHDAEWKFRHIFRGQPKRHLLTT 195

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWS+FVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAAA
Sbjct: 196 GWSIFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAA 255

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 302
           HAAATNSCFTVF+NPRASPSEFVIPL+KY+KAV+HTR+SVGMRFRMLFETEESSVRRYMG
Sbjct: 256 HAAATNSCFTVFYNPRASPSEFVIPLSKYIKAVYHTRISVGMRFRMLFETEESSVRRYMG 315

Query: 303 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 362
           TITGISDLD VRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK
Sbjct: 316 TITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 375

Query: 363 RPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGNDH 422
           RPWHP TSS +D RDE  +GL W+RGG  +QGL +LNFQ  GM PWMQQR++P+ LGND 
Sbjct: 376 RPWHPGTSSLHDGRDEATNGLMWMRGGPVDQGLNSLNFQGAGMLPWMQQRLDPTLLGNDQ 435

Query: 423 NQQYQAMLAAGMQ---SGDPVRQQFMQLQQPFQYLQQSGSQNPL---------------- 463
           NQQYQAMLAAG+Q   SG  ++QQ M  QQP+ YLQQSG+ N                  
Sbjct: 436 NQQYQAMLAAGLQNLGSGYLMKQQMMNFQQPYHYLQQSGNSNSPLQLQQQQPIQQSVSSN 495

Query: 464 QLKQQQHLL-----QQLNSQAEDRAQQQQQPQQHMYHDALQIRTDELLQRQQSNLPSPSF 518
            L+ Q H+L     Q L  +  +  + Q Q QQH Y D+L I +D+L QRQ S +PSPS+
Sbjct: 496 MLQPQAHVLTENLSQHLLQKPHNNQEVQAQQQQHTYQDSLLIPSDQLHQRQHSGIPSPSY 555

Query: 519 SKANFMDSSTEISVSISPMQNMLGSL-PEGSGNLLNFSGAGPSMLRQQFPQQSLGSKYEP 577
           SK +F+DSS +   S+SP QNML SL PEGSG+LLN S +  S+L +Q PQQ    KY P
Sbjct: 556 SKPDFLDSSMKFPASVSPGQNMLSSLCPEGSGSLLNLSRSSLSLLTEQLPQQQWTQKYAP 615

Query: 578 SQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFTT-S 636
            QV  +  ++S  + Y+GKD+A+   +CN+D+QNS +FGV+IDSSG LLP TV  +TT S
Sbjct: 616 VQVNTYGGTVS-HAQYSGKDSAMVLPHCNSDAQNSTLFGVNIDSSG-LLPITVPGYTTSS 673

Query: 637 VDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGSVGRSLDI 696
            D   S+MPL DSGF  S+YGCM DSSELL + G +D    ++TFVKVYKSGSVGRSLDI
Sbjct: 674 ADTNSSTMPLADSGFQGSLYGCM-DSSELLQSAGHVDPENQSQTFVKVYKSGSVGRSLDI 732

Query: 697 SRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYI 756
           SRFSSY+ELREEL QMFGIEGK EDPLRSGWQLVFVDRENDVLLLGDDPWE+FV+NVWYI
Sbjct: 733 SRFSSYHELREELAQMFGIEGKLEDPLRSGWQLVFVDRENDVLLLGDDPWESFVNNVWYI 792

Query: 757 KILSPEDVQKMGEQGVESFSPSSGQRANSRGNCGRD------PVGSLEY 799
           KILSPED+QKMGEQ VES +  SGQR N  G   +D       +GSLEY
Sbjct: 793 KILSPEDIQKMGEQAVESLALGSGQRLNGTGAESQDIVSGPPSIGSLEY 841


>gi|402746980|gb|AFQ94050.1| auxin response factor 1 [Camellia sinensis]
          Length = 820

 Score = 1176 bits (3041), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 613/810 (75%), Positives = 685/810 (84%), Gaps = 40/810 (4%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+NKCLNSELWHACAGPLVSLPTVG+RVVYFPQGHSEQVAATTNKEVD+HIPNYP+LPPQ
Sbjct: 15  GENKCLNSELWHACAGPLVSLPTVGSRVVYFPQGHSEQVAATTNKEVDAHIPNYPSLPPQ 74

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           LICQLHNVTMHADVETDEVYAQMTLQPL+P+EQKDT++P+ELGIPSKQPTNYFCKTLTAS
Sbjct: 75  LICQLHNVTMHADVETDEVYAQMTLQPLTPQEQKDTYIPVELGIPSKQPTNYFCKTLTAS 134

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSVPRRAAEKVFP LDFS QPP QELIARDLHDVEWKFRHIFRGQPKRHLLTT
Sbjct: 135 DTSTHGGFSVPRRAAEKVFPPLDFSQQPPCQELIARDLHDVEWKFRHIFRGQPKRHLLTT 194

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAAA
Sbjct: 195 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAA 254

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 302
           HAA+TNSCFT+F+NPRASPSEFVIPL+KY+KAV+HTRVSVGMRFRMLFETEESSVRRYMG
Sbjct: 255 HAASTNSCFTIFYNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMG 314

Query: 303 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 362
           TITGI DLDP+RW+NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK
Sbjct: 315 TITGIGDLDPIRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 374

Query: 363 RPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGNDH 422
           RPW+P  SSF D R+   +G+ WLRG TGEQGL +LNFQ++GMFPW QQRV+ +F  ND 
Sbjct: 375 RPWYPGASSFQDGREGAVNGMTWLRGETGEQGLHSLNFQNVGMFPWTQQRVDTTFARNDL 434

Query: 423 NQQYQAMLAAGMQS---GDPVRQQFMQLQQPFQYLQQSGSQNPLQLKQQQ---------- 469
           NQQYQAMLAAG+Q+   GD ++QQF+QLQQPFQY Q SGSQNPL L+Q Q          
Sbjct: 435 NQQYQAMLAAGLQNIGGGDSLKQQFLQLQQPFQYFQHSGSQNPL-LQQHQVIQPSISSHI 493

Query: 470 --------------HLLQQLNSQAEDRAQQQQQPQQHMYHDALQIRTDELLQRQQSNLPS 515
                         H+ QQ+N+Q+E+      QPQQH Y D   I++D+L QRQQSN+PS
Sbjct: 494 LQAQTQMLPENLPRHMQQQVNNQSEE------QPQQHTYQDPFLIQSDQLQQRQQSNVPS 547

Query: 516 PSFSKANFMDSSTEISVSISP-MQNMLGSL-PEGSGNLLNFSGAGPSMLRQQFPQQSLGS 573
            SFSK +F DS+ + S S++P +QNMLGSL  +GS NL NFS  G SM+ +   QQ   S
Sbjct: 548 HSFSKIDFADSNAKFSTSVTPCIQNMLGSLSTDGSANLFNFSSTGQSMVSEP-SQQPWVS 606

Query: 574 KYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSF 633
           K+  SQV    +S+SL + Y GKD AV  ENC+ D QN  +FG +ID  GLLLPTT+SS 
Sbjct: 607 KFTHSQVNPSANSVSL-TPYPGKDTAVEQENCSLDGQNHALFGANID-PGLLLPTTLSSI 664

Query: 634 -TTSVDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGSVGR 692
            T+SV+  VSSMPLG SGF +S+YGCMQDSSELLH+  Q+D  T  RTFVKVYKSGSVGR
Sbjct: 665 GTSSVNADVSSMPLGASGFQSSLYGCMQDSSELLHSAAQVDPPTANRTFVKVYKSGSVGR 724

Query: 693 SLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSN 752
           SLDISRFSSYNELREELGQMFGIEG  +DP RSGWQLVFVDRE+DVLLLGD PWEAFV+N
Sbjct: 725 SLDISRFSSYNELREELGQMFGIEGLLKDPQRSGWQLVFVDREDDVLLLGDGPWEAFVNN 784

Query: 753 VWYIKILSPEDVQKMGEQGVESFSPSSGQR 782
           VWYIKILSPEDV K+G+Q VESFS ++G+R
Sbjct: 785 VWYIKILSPEDVLKLGKQEVESFSHNTGER 814


>gi|357460625|ref|XP_003600594.1| Auxin response factor [Medicago truncatula]
 gi|355489642|gb|AES70845.1| Auxin response factor [Medicago truncatula]
          Length = 849

 Score = 1167 bits (3018), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 599/831 (72%), Positives = 669/831 (80%), Gaps = 39/831 (4%)

Query: 6   KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 65
           KCLNSELWHACAGPLVSLPT GTRVVYFPQGHSEQV+ATTN+E+D  IPNYP+LPPQL+C
Sbjct: 21  KCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVSATTNREIDGQIPNYPSLPPQLVC 80

Query: 66  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTS 125
           QLHNVTMHADVETDEVYAQMTLQPL+PEEQKDTF+P+ELGIPSKQP+NYFCKTLTASDTS
Sbjct: 81  QLHNVTMHADVETDEVYAQMTLQPLTPEEQKDTFLPMELGIPSKQPSNYFCKTLTASDTS 140

Query: 126 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 185
           THGGFSVPRRAAEKVFP LDFS QPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS
Sbjct: 141 THGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 200

Query: 186 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 245
           +FVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAAAHA+
Sbjct: 201 IFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAS 260

Query: 246 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 305
           ATNSCFTVF+NPRASPSEFVIPL+KY+KAV+HTR+SVGMRFRMLFETEESSVRRYMGTIT
Sbjct: 261 ATNSCFTVFYNPRASPSEFVIPLSKYIKAVYHTRISVGMRFRMLFETEESSVRRYMGTIT 320

Query: 306 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPW 365
           GISDLD VRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPW
Sbjct: 321 GISDLDAVRWQNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPW 380

Query: 366 HPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGNDHNQQ 425
           HP TSS  D RDE  + L W+RGG  +QGL +LNFQ  GM PWMQQR++P+ LGND NQQ
Sbjct: 381 HPGTSSLLDGRDEATNALMWMRGGPADQGLNSLNFQGAGMLPWMQQRLDPTLLGNDQNQQ 440

Query: 426 YQAML-AAGMQS---GDPVRQQFMQL-QQPFQYLQQSGSQNPLQLKQQQHLLQQLNSQAE 480
           YQAML AAGMQ+   G  +R Q +   QQP  YLQ   + +PLQL Q Q + Q ++S   
Sbjct: 441 YQAMLAAAGMQNMGGGYLMRPQMVNFQQQPTHYLQSGNNNSPLQLHQPQSIQQSVSSNMM 500

Query: 481 DRAQQQ-----------QQP----------QQHMYHDALQIRTDELLQR-QQSNLPSPSF 518
              Q Q           Q+P          QQH Y D L ++ D+L QR QQSN+PSPS+
Sbjct: 501 QPQQTQILTENLSQHLLQKPNNNQELQAQQQQHAYQDTLLVQNDQLHQRQQQSNVPSPSY 560

Query: 519 SKANFMDSSTEISVSISPMQNMLGSL-PEGSGNLLNFSG---AGPSMLRQQFPQQSLGSK 574
           SK +F+DS+ +   S+   QNMLGSL PEG+GNLLN S    +G S++ +Q PQQS   K
Sbjct: 561 SKPDFLDSNIKFPASVPSGQNMLGSLCPEGTGNLLNLSSLTRSGQSLMNEQLPQQSWTPK 620

Query: 575 YEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFT 634
           Y   QV  F  +MS  + Y+GKD+A+   +C++D+QN  + GV+IDSSGLLLPTTV ++T
Sbjct: 621 YGNMQVNAFGSAMS-HAQYSGKDSAIVPPHCDSDAQNHTLSGVNIDSSGLLLPTTVPNYT 679

Query: 635 TSVDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGSVGRSL 694
            S     +S  LG+SGF  S+Y CMQDSS  L N  QID      TFVKVYKSGSVGRSL
Sbjct: 680 ASTTDTGASTQLGESGFQGSLYACMQDSS-FLQNAEQIDTQNQNPTFVKVYKSGSVGRSL 738

Query: 695 DISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVW 754
           DISRFS Y ELREELGQMFGIEGK EDPLRSGWQLVFVDRENDVLLLGDDPWE+FV+NVW
Sbjct: 739 DISRFSCYRELREELGQMFGIEGKLEDPLRSGWQLVFVDRENDVLLLGDDPWESFVNNVW 798

Query: 755 YIKILSPEDVQKMGEQGVESFSPSSGQRANSRGN-----CGRDP-VGSLEY 799
           YIKILSPED+QKMG+Q VE     SGQR N  G       G+ P +GSL+Y
Sbjct: 799 YIKILSPEDIQKMGDQAVEMHGLGSGQRLNGTGESHHIVSGQPPSIGSLDY 849


>gi|381149271|gb|AFF60411.1| auxin response factor 8 [Nicotiana tabacum]
          Length = 843

 Score = 1163 bits (3009), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 595/837 (71%), Positives = 675/837 (80%), Gaps = 48/837 (5%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ KCLNSEL HACAGPLV LPTVG+RVVYFPQGHSEQVAATTNKEVD+HIPNYPNLPPQ
Sbjct: 15  GEKKCLNSELRHACAGPLVCLPTVGSRVVYFPQGHSEQVAATTNKEVDAHIPNYPNLPPQ 74

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           LICQLHNVTMHADVETDEVYAQMTLQPL+ +EQKDT++P+ELGIPS+QPTNYFCKTLTAS
Sbjct: 75  LICQLHNVTMHADVETDEVYAQMTLQPLTRQEQKDTYLPVELGIPSRQPTNYFCKTLTAS 134

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSVPRRAAEKVFP LDFS  PP QELIARDLHD+EWKFRHIFRGQPKRHLLTT
Sbjct: 135 DTSTHGGFSVPRRAAEKVFPPLDFSQTPPCQELIARDLHDIEWKFRHIFRGQPKRHLLTT 194

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWSVFVSAKRLVAGDSVLFIWN+KNQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAAA
Sbjct: 195 GWSVFVSAKRLVAGDSVLFIWNKKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAA 254

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 302
           HAAATNSCFTVFFNPRASPSEFVIPL+KY+KAV+HTRVSVGMRFRMLFETEESSVRRYMG
Sbjct: 255 HAAATNSCFTVFFNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMG 314

Query: 303 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 362
           TITGI DLDPVRW+NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK
Sbjct: 315 TITGIGDLDPVRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 374

Query: 363 RPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGNDH 422
           RPW+P TSSF +N  ET +G+ WLRG  G+QG   +N QS GM PWMQQRV+P+ L ND 
Sbjct: 375 RPWYPGTSSFQENNSETINGMAWLRGEGGDQGPHLMNLQSFGMLPWMQQRVDPTILRNDL 434

Query: 423 NQQYQAMLAAGMQ---SGDPVRQQFMQLQQPFQYLQQSGSQNPL---------------- 463
           NQQYQAMLA G+Q   SGD ++QQ MQ QQP QYLQ +GS NPL                
Sbjct: 435 NQQYQAMLATGLQNFGSGDMLKQQLMQFQQPVQYLQHAGSHNPLLQQQQQQQAMQQQQAI 494

Query: 464 ---------QLKQ-QQHLLQQLNSQAEDRAQQQQQPQQHMYHDALQIRTDELLQRQQSNL 513
                    Q+   Q+   QQ+ +Q +D+A       QH Y +A QI   +L Q+Q SN+
Sbjct: 495 HQHMLPAQTQMDNVQRQPQQQVGNQMDDQA------HQHSYQEAYQISHSQLQQKQPSNI 548

Query: 514 PSPSFSKANFMDSSTEISVSISP--MQNMLGSL-PEGSGNLLNFSGAG-PSMLRQQFPQQ 569
           PS SFSK +F D +++ + SI+P  +   LGSL  EGS N LNF+  G  S++ +Q PQ+
Sbjct: 549 PSQSFSKPDFADPNSKFAASIAPSVIPMGLGSLCSEGSSNFLNFNRIGQQSVIMEQPPQK 608

Query: 570 SLGSKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTT 629
           S  SK+  S++    +S SLP+   GKD     E C+ ++QN  +FG ++DSSGLLLPTT
Sbjct: 609 SWMSKFGHSELNAGSNSSSLPAY--GKDTPTSQETCSLNAQNQTLFGANVDSSGLLLPTT 666

Query: 630 VSSF-TTSVDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSG 688
           VS+  TT +D  +S+MPLG SGF NS+YG +QDSS+LLHN GQ+D L  TRTFVKVYKSG
Sbjct: 667 VSNVSTTPIDADMSTMPLGTSGFQNSLYGYVQDSSDLLHNAGQVDSLNATRTFVKVYKSG 726

Query: 689 SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEA 748
           SVGRSLDI+RF+SY+ELR+ELGQMFGIEG  EDP RSGWQLVFVDRENDVLLLGDDPWEA
Sbjct: 727 SVGRSLDITRFNSYHELRQELGQMFGIEGFLEDPQRSGWQLVFVDRENDVLLLGDDPWEA 786

Query: 749 FVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANSRGNCGRD------PVGSLEY 799
           FV+NVWYIKILSPEDV K+G++ VES +  S +R NS    GRD       +GSL+Y
Sbjct: 787 FVNNVWYIKILSPEDVLKLGKEEVESLNRGSLERMNSNSADGRDFMSGLPSIGSLDY 843


>gi|350539862|ref|NP_001234552.1| auxin response factor 8-1 [Solanum lycopersicum]
 gi|302035373|gb|ADK92393.1| auxin response factor 8-1 [Solanum lycopersicum]
          Length = 844

 Score = 1143 bits (2957), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 592/832 (71%), Positives = 669/832 (80%), Gaps = 37/832 (4%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+NKCLNSELWHACAGPLV LPTVG+RVVYFPQGHSEQVAATTNKEVD HIPNYPNLPPQ
Sbjct: 15  GENKCLNSELWHACAGPLVCLPTVGSRVVYFPQGHSEQVAATTNKEVDIHIPNYPNLPPQ 74

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           LICQLHNVTMHADVETDEVYAQMTLQPL+ +EQKDT++P+ELGIPS+QPTNYFCKTLTAS
Sbjct: 75  LICQLHNVTMHADVETDEVYAQMTLQPLTLQEQKDTYLPVELGIPSRQPTNYFCKTLTAS 134

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSVPRRAAEKVFP LDFS  PP QELIARDLHD+EWKFRHIFRGQPKRHLLTT
Sbjct: 135 DTSTHGGFSVPRRAAEKVFPPLDFSQTPPCQELIARDLHDIEWKFRHIFRGQPKRHLLTT 194

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWSVFVSAKRLVAGDSVLFIWNEKNQL LGIRRA RP TVMPSSVLSSDSMHIGLLAAAA
Sbjct: 195 GWSVFVSAKRLVAGDSVLFIWNEKNQLFLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAA 254

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 302
           HAA+TNSCF VFFNPRASPSEFVIPL+KY+KAV+HTRVSVGMRFRMLFETEESSVRRYMG
Sbjct: 255 HAASTNSCFIVFFNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMG 314

Query: 303 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 362
           TITGI DLDPVRW+NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK
Sbjct: 315 TITGIGDLDPVRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 374

Query: 363 RPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSL-GMFPWMQQRVEPSFLGND 421
           RPW+P TSSF +N  E  +G+ WLRG + EQG   LN QS  GMFPWMQQRV+P+ L ND
Sbjct: 375 RPWYPGTSSFQENNSEAINGMTWLRGESSEQGPHLLNLQSFGGMFPWMQQRVDPTMLRND 434

Query: 422 HNQQYQAMLAAGMQ---SGDPVRQQFMQLQQPFQYLQQSGSQNPLQLKQQQHLL------ 472
            NQQYQAMLA+G+Q   SGD ++QQ MQ  QP QY+Q +GS NPL  +QQQ         
Sbjct: 435 LNQQYQAMLASGLQNFGSGDLMKQQLMQFPQPVQYVQHAGSVNPLLQQQQQQQETMQQTI 494

Query: 473 --QQLNSQAEDRA----------QQQQQPQQHMYHDALQIRTDELLQRQQSNLPSPSFSK 520
               L +Q +D            Q ++Q  QH Y DA QI   +L Q+Q SN+PSPSFSK
Sbjct: 495 HHHMLPAQTQDNLQRQQQQHVSNQTEEQSHQHSYQDAYQIPNSQLQQKQPSNVPSPSFSK 554

Query: 521 ANFMDSSTEISVSISP--MQNMLGSL-PEGSGNLLNFS--GAGPSMLRQQFPQQSLGSKY 575
            +  D S++ S SI+P  M   LGSL  EG+ N LNF+  G  P ++ QQ  Q+S  +K+
Sbjct: 555 PDIADPSSKFSASIAPSGMPTALGSLCSEGTTNFLNFNIIGQQPVIMEQQQQQKSWMAKF 614

Query: 576 EPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSF-T 634
             SQ+     S SL S Y GK+ +   E C+ D+QN  +FG ++DSSGLLLPTTVS+  T
Sbjct: 615 ANSQLNMGSSSPSL-SGY-GKETSNSQETCSLDAQNQSLFGANVDSSGLLLPTTVSNVAT 672

Query: 635 TSVDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGSVGRSL 694
           TS+D  +SSMPLG SGF N +Y  +QDS++LLHNVGQ D  T  RTFVKVYKS S+GRSL
Sbjct: 673 TSIDADISSMPLGTSGFPNPLYSYVQDSTDLLHNVGQADAQTVPRTFVKVYKSASLGRSL 732

Query: 695 DISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVW 754
           DI+RF+SY+ELR+ELGQMFGIEG  E+P RSGWQLVFVDRENDVLLLGDDPWE FV+NVW
Sbjct: 733 DITRFNSYHELRQELGQMFGIEGFLENPQRSGWQLVFVDRENDVLLLGDDPWEEFVNNVW 792

Query: 755 YIKILSPEDVQKMGEQGVESFSPSSGQRANSRGNC-GRD------PVGSLEY 799
           YIKILSPEDVQK+G++ V S +    +R +S  +  GRD       +GSL+Y
Sbjct: 793 YIKILSPEDVQKLGKEEVGSLNRGPPERMSSNNSADGRDFMSGLPSIGSLDY 844


>gi|350536917|ref|NP_001234783.1| auxin response factor 8 [Solanum lycopersicum]
 gi|154550159|gb|ABS83388.1| auxin response factor 8 [Solanum lycopersicum]
          Length = 844

 Score = 1143 bits (2957), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 584/833 (70%), Positives = 667/833 (80%), Gaps = 39/833 (4%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+NKCLNSELWHACAGPLV LPTVG+RVVYFPQGHSEQVAATTNKE+D HIPNYPNLPPQ
Sbjct: 15  GENKCLNSELWHACAGPLVCLPTVGSRVVYFPQGHSEQVAATTNKELDIHIPNYPNLPPQ 74

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           LIC LHNVTMHADVETDEVYAQMTLQPL+ +EQKDT++P+ELGIPS+QPTNYFCKTLTAS
Sbjct: 75  LICPLHNVTMHADVETDEVYAQMTLQPLTLQEQKDTYLPVELGIPSRQPTNYFCKTLTAS 134

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSVPRRAAEKVFP LDFS  PP QELIARDLHD+EWKFRHIFRGQPKRHLLTT
Sbjct: 135 DTSTHGGFSVPRRAAEKVFPPLDFSQTPPCQELIARDLHDIEWKFRHIFRGQPKRHLLTT 194

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWSVFVSAKRLVAGDSVLFIWNEKNQL LGIRRA RP TVMPSSVLSSDSMHIGLLAAAA
Sbjct: 195 GWSVFVSAKRLVAGDSVLFIWNEKNQLFLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAA 254

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 302
           HAA+TNSCF VFFNPRASPSEFVIPL+KY+KAV+HTRVSVGMRFRMLFETEESSVRRYMG
Sbjct: 255 HAASTNSCFIVFFNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMG 314

Query: 303 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 362
           TITGI DLDPVRW+NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK
Sbjct: 315 TITGIGDLDPVRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 374

Query: 363 RPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGNDH 422
           RP++  TSS+ D+ +E  + ++WLRG  GE G  ++N QS GM PWMQQRV+ + L ND 
Sbjct: 375 RPFYQGTSSYQDSNNEAINRMSWLRGNAGELGHHSMNLQSFGMLPWMQQRVDSTILPNDI 434

Query: 423 NQQYQAMLAAGMQ---SGDPVRQQFMQLQQPFQYLQQSGSQNPL------------QLKQ 467
           NQ YQAMLA G+Q   SGD ++QQ MQ QQP QYLQ + ++N +            Q   
Sbjct: 435 NQHYQAMLATGLQSFGSGDLLKQQLMQFQQPVQYLQHASTENSILHQQQQQQQQIMQQAV 494

Query: 468 QQHLLQ----------QLNSQAEDRAQQQQQPQQHMYHDALQIRTDELLQRQQSNLPSPS 517
            QH+L           Q  SQ +   Q ++Q  QH Y +A Q+  D+L QRQ SN+ SP 
Sbjct: 495 HQHMLPAQTQMLSENLQRQSQHQSNNQSEEQAHQHTYQEAFQLPHDQLQQRQPSNVTSP- 553

Query: 518 FSKANFMDSSTEISVSISP--MQNMLGSL-PEGSGNLLNFSGAGPSMLRQQFPQQSLGSK 574
           F KA+F D +++ S S++P  +QNMLGSL  EGS N LN +  G S++ +Q PQQS  SK
Sbjct: 554 FLKADFADLTSKFSASVAPSGVQNMLGSLCSEGSNNSLNINRTGQSVIIEQSPQQSWMSK 613

Query: 575 YEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSF- 633
           +  SQ+    +S SLP+   GKD      NC+ DSQN  +FG ++DSSGLLLPTTVS+  
Sbjct: 614 FTESQLNTCSNSSSLPTY--GKDTFNPRGNCSLDSQNQSLFGANVDSSGLLLPTTVSNVA 671

Query: 634 TTSVDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGSVGRS 693
           TTS+D  +SSMPLG SGF N +Y  +QDS++LLHNVGQ D  T  RTFVKVYKS S+GRS
Sbjct: 672 TTSIDADISSMPLGTSGFPNPLYSYVQDSTDLLHNVGQADAQTVPRTFVKVYKSASLGRS 731

Query: 694 LDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNV 753
           LDI+RF+SY+ELR+ELGQMFGIEG  EDP RSGWQLVFVDRENDVLLLGDDPWE FV+NV
Sbjct: 732 LDITRFNSYHELRQELGQMFGIEGLLEDPQRSGWQLVFVDRENDVLLLGDDPWEEFVNNV 791

Query: 754 WYIKILSPEDVQKMGEQGVESFSPSSGQRANSRGNC-GRD------PVGSLEY 799
           WYIKILSPEDVQK+G++ V S +    +R +S  +  GRD       +GSL+Y
Sbjct: 792 WYIKILSPEDVQKLGKEEVGSLNRGPPERMSSNNSADGRDFMSGLPSIGSLDY 844


>gi|161579976|gb|ABN10955.2| auxin response factor 8 [Ipomoea nil]
          Length = 838

 Score = 1119 bits (2895), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 582/829 (70%), Positives = 650/829 (78%), Gaps = 39/829 (4%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ KCLNSELWHACAGPLVSLP +G+RVVYFPQGHSEQV A+TNKE+D+HIP+YP LP Q
Sbjct: 17  GEKKCLNSELWHACAGPLVSLPPLGSRVVYFPQGHSEQVTASTNKEIDAHIPSYPGLPAQ 76

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDT-FVPIELGIPSKQPTNYFCKTLTA 121
           LICQLHNVTMHAD ETDEVYAQMTLQPLS +EQKD   +P ELG+PSKQPTNYFCKTLTA
Sbjct: 77  LICQLHNVTMHADNETDEVYAQMTLQPLSAQEQKDVCLLPAELGMPSKQPTNYFCKTLTA 136

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAEKVFP LD+S QPPAQELIA+DLH  EWKFRH+FRGQPKRHLLT
Sbjct: 137 SDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIAKDLHGNEWKFRHVFRGQPKRHLLT 196

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWSVFVSAKRLVAGD+V+FIWNE NQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAA
Sbjct: 197 TGWSVFVSAKRLVAGDAVIFIWNENNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAA 256

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           AHAAATNS FT+F+NPRASPS+FVIPL KY KAV+HTRVSVGMRFRMLFETEESSVRRYM
Sbjct: 257 AHAAATNSRFTIFYNPRASPSDFVIPLAKYAKAVYHTRVSVGMRFRMLFETEESSVRRYM 316

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRL 361
           GTITGISDLDPVRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMY SLFPLRL
Sbjct: 317 GTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYSSLFPLRL 376

Query: 362 KRPWHPSTSSFNDNRDETASGLNWLRGGTGEQ-GLTTLNFQSLGMFPWMQQRVEPSFLGN 420
           KRPW+P  SSF D+ +E  +G+ WLRG  GEQ G  ++N QS GM PWMQQRV+P+ L  
Sbjct: 377 KRPWYPGPSSFQDSNNEVINGMTWLRGEIGEQGGPQSVNLQSFGMLPWMQQRVDPAMLRT 436

Query: 421 DHNQQYQAMLAAGMQ---SGDPVRQQFMQLQQPFQYLQQSGSQNPL-------------- 463
           D+NQQYQAMLAAG+Q   + D  +QQ MQ QQP QYLQ SGS NPL              
Sbjct: 437 DYNQQYQAMLAAGLQNFGNADLFKQQLMQFQQPAQYLQASGSHNPLLQQQQQVIQQPMSS 496

Query: 464 -QLKQQQHLLQ---QLNSQAEDRAQQQQQPQQHMYHDALQIRTDELLQRQQSNLPSPSFS 519
             L  Q  +L    Q + Q +   Q ++  QQH Y +A  +  D+L QR  SN+PSPSFS
Sbjct: 497 HMLPAQTQMLSDSLQRHPQQQTSGQTEEPTQQHAYQEAFPVSHDQLQQRPLSNIPSPSFS 556

Query: 520 KANFMDSSTEISVSISPMQNMLGSL-PEGSGNLLNFSGAGPSMLRQQFP--QQSLGSKYE 576
           K NF        VS S MQ+MLGSL PEGS NLLNF   G S L +  P  QQS   K+ 
Sbjct: 557 KTNFAP-----PVSPSSMQSMLGSLCPEGSSNLLNFKRTGQSALNEHQPQVQQSWSPKFA 611

Query: 577 PSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFTTS 636
            S +    +S+S P SY GK+A+   E C  D+QN   FG  IDS GLLLPTT+SS TTS
Sbjct: 612 NSHISTCSNSVSTP-SYPGKEASSQQETCALDAQNQSFFGASIDSPGLLLPTTLSSVTTS 670

Query: 637 VDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGSVGRSLDI 696
           V   VSS+P G SGF NS YG +QDSSEL+ + GQ+D  TP RTF+KVYKSG VGRSLDI
Sbjct: 671 VVADVSSLPSGASGFQNSPYGYVQDSSELVSSAGQVDPSTP-RTFIKVYKSGYVGRSLDI 729

Query: 697 SRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYI 756
           +R SSY+ELR+EL QMFGIEG  EDP RSGWQLVFVDRENDVLLLGDDPWEAFV+NVWYI
Sbjct: 730 TRISSYHELRQELAQMFGIEGLLEDPQRSGWQLVFVDRENDVLLLGDDPWEAFVNNVWYI 789

Query: 757 KILSPEDVQKMGEQGVESFSPSSGQRANSRGNCGRD------PVGSLEY 799
           KILSPEDVQK+G+Q  +S S ++ +R N  G  GRD       +GSLEY
Sbjct: 790 KILSPEDVQKLGKQEAKSLSRNTMERMNGSGADGRDHLSGFPSLGSLEY 838


>gi|297805254|ref|XP_002870511.1| hypothetical protein ARALYDRAFT_493698 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297316347|gb|EFH46770.1| hypothetical protein ARALYDRAFT_493698 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 805

 Score = 1066 bits (2756), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 562/794 (70%), Positives = 632/794 (79%), Gaps = 47/794 (5%)

Query: 6   KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 65
           KCLNSELWHACAGPLVSLP+ G+RVVYFPQGHSEQVAATTNKEVD HIPNYP+LPPQLIC
Sbjct: 17  KCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPSLPPQLIC 76

Query: 66  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTS 125
           QLHNVTMHADVETDEVYAQMTLQPL+PEEQK+TFVPIELGIPSKQP+NYFCKTLTASDTS
Sbjct: 77  QLHNVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIELGIPSKQPSNYFCKTLTASDTS 136

Query: 126 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 185
           THGGFSVPRRAAEKVFP LD++LQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS
Sbjct: 137 THGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 196

Query: 186 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 245
           VFVSAKRLVAGDSV+FI NEKNQL LGIR A RP T++PSSVLSSDSMHIGLLAAAAHA+
Sbjct: 197 VFVSAKRLVAGDSVIFIRNEKNQLFLGIRHATRPQTIVPSSVLSSDSMHIGLLAAAAHAS 256

Query: 246 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 305
           ATNSCFTVFF+PRAS SEFVI L+KY+KAVFHTR+SVGMRFRMLFETEESSVRRYMGTIT
Sbjct: 257 ATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTIT 316

Query: 306 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPW 365
           GISDLD VRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPW
Sbjct: 317 GISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPW 376

Query: 366 HPSTSSFNDNRDETASGLNWLRGGTGEQGLTT-LNFQSLGMFPWMQQRVEPSFLGNDHNQ 424
           H  TSS  D R +  SGL WLRGG GEQ     LN+ S+G+FPWMQQR++ + +G D+NQ
Sbjct: 377 HAGTSSLADGRGDLGSGLTWLRGGGGEQQGLLPLNYPSVGLFPWMQQRLDLTQMGTDNNQ 436

Query: 425 QYQAMLAAGMQS---GDPVRQQFMQLQQPF-QYLQQSGSQNP-LQLKQQQHLLQQLNSQA 479
           QYQAMLAAG+Q+   GDP+RQQF+QLQ+P  QYLQQS S NP L L+QQQH   +    A
Sbjct: 437 QYQAMLAAGLQNIGGGDPLRQQFVQLQEPHQQYLQQSASHNPDLMLQQQQHQQARHLMHA 496

Query: 480 EDRAQQQQQPQQHM---------------------YHDALQIRTDELLQRQQSNLPSPSF 518
           + +   +  PQQ+M                     Y +A +++   L Q Q S +PSPSF
Sbjct: 497 QSQIMSENLPQQNMRQEVSNQPAGQQQLQQADQNAYLNAFKMQNGHLQQWQHSEMPSPSF 556

Query: 519 SKANFMDSSTEISVSISPMQNMLGSLPEGSGNLLNFSGAGPSMLRQQFPQQSLGSKYEPS 578
            K++F DSS + + + SP         +GS NLLNFS  G S+L    P+Q     + P 
Sbjct: 557 MKSDFPDSSNKFATTASPASG------DGS-NLLNFSITGQSVL----PEQLTTEGWSPK 605

Query: 579 QVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFTTSV- 637
               F   +SLP +Y GK  A+       +  N  +FGV  D SGL LP+TV  F +S  
Sbjct: 606 ASNTFSEPLSLPQAYPGKSLAL-------EPGNPSLFGVDPD-SGLFLPSTVPRFASSSG 657

Query: 638 DPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGSVGRSLDIS 697
           D   S M L DSGF NS++GCMQD+ ELLH  GQI+  T T+ FVKVYKSGSVGRSLDIS
Sbjct: 658 DAEASPMSLTDSGFQNSLFGCMQDTHELLHGAGQINPSTQTKNFVKVYKSGSVGRSLDIS 717

Query: 698 RFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIK 757
           RFSSY+ELREELG+MF IEG  EDPLRSGWQLVFVD+END+LLLGDDPWE+FV+NVWYIK
Sbjct: 718 RFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFVDKENDILLLGDDPWESFVNNVWYIK 777

Query: 758 ILSPEDVQKMGEQG 771
           ILSPEDVQ+MG+ G
Sbjct: 778 ILSPEDVQQMGDHG 791


>gi|15239481|ref|NP_198518.1| auxin response factor 8 [Arabidopsis thaliana]
 gi|46576647|sp|Q9FGV1.2|ARFH_ARATH RecName: Full=Auxin response factor 8; AltName: Full=Protein FRUIT
           WITHOUT FERTILIZATION
 gi|4104931|gb|AAD02219.1| auxin response factor 8 [Arabidopsis thaliana]
 gi|49616355|gb|AAT67074.1| ARF8 [Arabidopsis thaliana]
 gi|332006754|gb|AED94137.1| auxin response factor 8 [Arabidopsis thaliana]
          Length = 811

 Score = 1060 bits (2741), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 562/803 (69%), Positives = 631/803 (78%), Gaps = 59/803 (7%)

Query: 6   KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 65
           KCLNSELWHACAGPLVSLP+ G+RVVYFPQGHSEQVAATTNKEVD HIPNYP+LPPQLIC
Sbjct: 17  KCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPSLPPQLIC 76

Query: 66  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTS 125
           QLHNVTMHADVETDEVYAQMTLQPL+PEEQK+TFVPIELGIPSKQP+NYFCKTLTASDTS
Sbjct: 77  QLHNVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIELGIPSKQPSNYFCKTLTASDTS 136

Query: 126 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 185
           THGGFSVPRRAAEKVFP LD++LQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS
Sbjct: 137 THGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 196

Query: 186 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 245
           VFVSAKRLVAGDSV+FI NEKNQL LGIR A RP T++PSSVLSSDSMHIGLLAAAAHA+
Sbjct: 197 VFVSAKRLVAGDSVIFIRNEKNQLFLGIRHATRPQTIVPSSVLSSDSMHIGLLAAAAHAS 256

Query: 246 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 305
           ATNSCFTVFF+PRAS SEFVI L+KY+KAVFHTR+SVGMRFRMLFETEESSVRRYMGTIT
Sbjct: 257 ATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTIT 316

Query: 306 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPW 365
           GISDLD VRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPW
Sbjct: 317 GISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPW 376

Query: 366 HPSTSSFNDNRDETASGLNWLRGGTGEQGLTT-LNFQSLGMFPWMQQRVEPSFLGNDHNQ 424
           H  TSS  D R +  SGL WLRGG GEQ     LN+ S+G+FPWMQQR++ S +G D+NQ
Sbjct: 377 HAGTSSLPDGRGDLGSGLTWLRGGGGEQQGLLPLNYPSVGLFPWMQQRLDLSQMGTDNNQ 436

Query: 425 QYQAMLAAGMQS---GDPVRQQFMQLQQP-FQYLQQSGSQNP-LQLKQ------QQHLLQ 473
           QYQAMLAAG+Q+   GDP+RQQF+QLQ+P  QYLQQS S N  L L+Q       +HL+ 
Sbjct: 437 QYQAMLAAGLQNIGGGDPLRQQFVQLQEPHHQYLQQSASHNSDLMLQQQQQQQASRHLM- 495

Query: 474 QLNSQAEDRAQQQQQPQQHM----------------------YHDALQIRTDELLQ-RQQ 510
                A+ +   +  PQQ+M                      Y +A +++   L Q +QQ
Sbjct: 496 ----HAQTQIMSENLPQQNMRQEVSNQPAGQQQQLQQPDQNAYLNAFKMQNGHLQQWQQQ 551

Query: 511 SNLPSPSFSKANFMDSSTEISVSISPMQNMLGSLPEGSGNLLNFSGAGPSMLRQQFPQQS 570
           S +PSPSF K++F DSS + + + SP          G GNLLNFS  G S+L    P+Q 
Sbjct: 552 SEMPSPSFMKSDFTDSSNKFATTASPA--------SGDGNLLNFSITGQSVL----PEQL 599

Query: 571 LGSKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTV 630
               + P     F   +SLP +Y GK  A+   N     QN  +FGV  D SGL LP+TV
Sbjct: 600 TTEGWSPKASNTFSEPLSLPQAYPGKSLALEPGN----PQNPSLFGVDPD-SGLFLPSTV 654

Query: 631 SSFTTSV-DPGVSSMPLGDSGFHNSMYGCMQDSS-ELLHNVGQIDQLTPTRTFVKVYKSG 688
             F +S  D   S M L DSGF NS+Y CMQD++ ELLH  GQI+    T+ FVKVYKSG
Sbjct: 655 PRFASSSGDAEASPMSLTDSGFQNSLYSCMQDTTHELLHGAGQINSSNQTKNFVKVYKSG 714

Query: 689 SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEA 748
           SVGRSLDISRFSSY+ELREELG+MF IEG  EDPLRSGWQLVFVD+END+LLLGDDPWE+
Sbjct: 715 SVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFVDKENDILLLGDDPWES 774

Query: 749 FVSNVWYIKILSPEDVQKMGEQG 771
           FV+NVWYIKILSPEDV +MG+ G
Sbjct: 775 FVNNVWYIKILSPEDVHQMGDHG 797


>gi|379323214|gb|AFD01306.1| auxin response factor 8-2 [Brassica rapa subsp. pekinensis]
          Length = 844

 Score = 1043 bits (2697), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 569/825 (68%), Positives = 638/825 (77%), Gaps = 70/825 (8%)

Query: 6   KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 65
           KCLNSELWHACAGPLVSLP+ G+RVVYFPQGHSEQVAATTNKEVD HIPNYP+LPPQLIC
Sbjct: 17  KCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPSLPPQLIC 76

Query: 66  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTS 125
           QLHNVTMHADVETDEVYAQMTLQPL+PEEQK+TFVPIELGIPSKQP+NYFCKTLTASDTS
Sbjct: 77  QLHNVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIELGIPSKQPSNYFCKTLTASDTS 136

Query: 126 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 185
           THGGFSVPRRAAEKVFP LD+SLQPPAQEL+ARDLHDVEWKFRHIFRGQPKRHLLTTGWS
Sbjct: 137 THGGFSVPRRAAEKVFPPLDYSLQPPAQELLARDLHDVEWKFRHIFRGQPKRHLLTTGWS 196

Query: 186 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 245
           VFVSAKRLVAGDSV+FI NEKNQL LGIRRA RP T++PSSVLSSDSMHIGLLAAAAHA+
Sbjct: 197 VFVSAKRLVAGDSVIFIRNEKNQLFLGIRRATRPQTIVPSSVLSSDSMHIGLLAAAAHAS 256

Query: 246 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 305
           ATNSCFTVFF+PRAS SEFVI L+KY+KAVFHTR+SVGMRFRMLFETEESSVRRYMGTIT
Sbjct: 257 ATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTIT 316

Query: 306 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPW 365
           GISDLD VRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPW
Sbjct: 317 GISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPW 376

Query: 366 HPSTSS-------------------------FNDNRDETASGLNWLR--GGTGEQGLTTL 398
           H  TSS                         F D R E  SGL WLR  GG  +QGL  L
Sbjct: 377 HAGTSSLHGIHPPFVSSPKLLVAINLKSLLVFTDGRGELGSGLPWLRGGGGGEQQGLLPL 436

Query: 399 NFQSLGMFPWMQQRVEPSFLGNDHNQQYQAMLAAGMQS---GDPVRQQFMQLQQP---FQ 452
           N+ S+G+FPWMQQR++ + LG D+NQQYQAMLAAG+Q+   GDP+RQQF+QLQ+P    Q
Sbjct: 437 NYPSVGLFPWMQQRLDLAQLGTDNNQQYQAMLAAGLQNMGGGDPLRQQFVQLQEPPPHHQ 496

Query: 453 YLQQSGSQNP-LQL---KQQQHLLQ-QLNSQAEDRAQQQQQPQ-------------QHMY 494
           YLQQS S N  L L   +QQQHL+  Q    +E+  Q+Q+  +             Q+ Y
Sbjct: 497 YLQQSASHNSDLMLQQQQQQQHLMHAQTQIMSENLPQRQEVSKQQPGGGGGQQSVDQNAY 556

Query: 495 HDALQI-RTDELLQRQQSNLPSPSFSKANFMDSSTEISVSISPMQNMLGSLPEGSG-NLL 552
            +AL++        +Q S++PSPSF KA+F D   +   + +PMQ    S   G G NLL
Sbjct: 557 LNALKMQNGQLQQWQQHSDMPSPSFMKADFTD---KFPTTATPMQQNSASPGSGHGSNLL 613

Query: 553 NFSGAGPSMLRQQFPQQSLGSKYEPSQVRDFVHSMSL-PSSYNGKDAAVGTENCNTDSQN 611
           NFS  G S+L    P+Q +G  + P     F   +SL P +Y GK  A+   + N    N
Sbjct: 614 NFSITGQSVL----PEQLMGEGWSPKASNTFSEPLSLPPQAYAGKSLALEPASANV---N 666

Query: 612 SVVFGVHIDSSGLLLPTTVSSFTTSVDPGVSS---MPLGDSGFHNSMYG-CMQDSS-ELL 666
             VFGV    SGL LP+TV  F +S   G +    M LGDSGF NS+Y  CMQD++ ELL
Sbjct: 667 PSVFGVD-PGSGLFLPSTVPRFASSSSGGDAEAYPMSLGDSGFENSLYNSCMQDTTHELL 725

Query: 667 HNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSG 726
           H VGQI     T+ FVKVYKSGSVGRSLDISRFSSY+ELREELG+MF IEG  EDPLRSG
Sbjct: 726 HGVGQISPSNQTKNFVKVYKSGSVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSG 785

Query: 727 WQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 771
           WQLVFVD+END+LLLGDDPWE+FVSNVWYIKILSPEDVQ+MG+ G
Sbjct: 786 WQLVFVDKENDILLLGDDPWESFVSNVWYIKILSPEDVQEMGDHG 830


>gi|312281961|dbj|BAJ33846.1| unnamed protein product [Thellungiella halophila]
          Length = 801

 Score = 1039 bits (2686), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 546/794 (68%), Positives = 619/794 (77%), Gaps = 47/794 (5%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ KCLNSELWHACAGPLVSLP+ G+RVVYFPQGHSEQVAATTNKEV+ HIPNYP+LPPQ
Sbjct: 15  GEKKCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVEGHIPNYPSLPPQ 74

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           LICQLHNVTMHADVETDEVYAQM LQPL+ EEQKDTFVPIELGIPSKQP+NYFCKTLTAS
Sbjct: 75  LICQLHNVTMHADVETDEVYAQMVLQPLTQEEQKDTFVPIELGIPSKQPSNYFCKTLTAS 134

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSVPRRAAEKVFP LD++ QPPAQELIARDLHD EWKFRHIFRGQPKRHLLTT
Sbjct: 135 DTSTHGGFSVPRRAAEKVFPPLDYTQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTT 194

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWSVFVSAKRLV GDSV+FI NE+NQLLLGIR A RP T++PSS+LSSDSMHIGLLAAAA
Sbjct: 195 GWSVFVSAKRLVTGDSVIFIRNERNQLLLGIRHASRPQTIVPSSMLSSDSMHIGLLAAAA 254

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 302
           HAAATNSCFTVF++PR+S SEFV+PL KY+KAVFHTR+SVGMRFRMLFETEESSVRRYMG
Sbjct: 255 HAAATNSCFTVFYHPRSSSSEFVLPLPKYIKAVFHTRISVGMRFRMLFETEESSVRRYMG 314

Query: 303 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 362
           TITGI DLD VRW NSHWRSVKVGWDESTAGERQ R SLWEIEPLTTFPMYPSLFPLRLK
Sbjct: 315 TITGIGDLDSVRWPNSHWRSVKVGWDESTAGERQARASLWEIEPLTTFPMYPSLFPLRLK 374

Query: 363 RPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGNDH 422
           RPWHP  SS +D+R + ASGL W RGG GE G+  LN+ S  +FPWMQQ    S LG D 
Sbjct: 375 RPWHPGASSMHDSRGDIASGLTWFRGGAGENGMLPLNYPSASLFPWMQQ----SLLGTDQ 430

Query: 423 NQQYQAMLAAGMQS---GDPVRQQFMQLQQP-FQYLQQSGSQNPLQL------------K 466
           NQQYQAMLAAG+Q+   GDP+RQQF+QLQ+P  QYLQQS S +   L            +
Sbjct: 431 NQQYQAMLAAGLQNIGGGDPLRQQFVQLQEPNHQYLQQSASLHNSDLLLQQHHQASSQQQ 490

Query: 467 QQQHLLQQLNSQAEDRAQQQQQPQQHMYHDALQIRTDELLQR----QQSNLPSPSFSKAN 522
             +HLLQ      E+       PQQ++  +     T +  Q     Q S+L SPSF K++
Sbjct: 491 LPRHLLQAQTQMTENL------PQQNLRQEVSNQVTGQPQQPNRVWQHSDLLSPSFMKSD 544

Query: 523 FMDSSTEISVSISPMQNMLGSLPEGSG---NLLNFSGAGPSMLR-QQFPQQSLGSKYEPS 578
           F D + + + + +P+Q    +L +GSG   NLLNFS  G S +  +Q P Q    K+   
Sbjct: 545 FADLNNKFTSTANPVQQQNSTL-QGSGDGSNLLNFSITGQSSVHSEQIPTQVWSLKHSHP 603

Query: 579 QVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSF-TTSV 637
           +  +F   +SL  +Y G   ++   N    +QN  +FGV  D SGL LPTTV  F T S 
Sbjct: 604 ETNEFSEPLSLRQAYGGTSPSLEPPN----TQNLSLFGVDSD-SGLFLPTTVPHFGTLSA 658

Query: 638 DPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGSVGRSLDIS 697
           D   SSMPL DSGF NS+YG MQD++ELLH  GQ      T+ FVKVYKSGSVGRSLDIS
Sbjct: 659 DADTSSMPLTDSGFQNSLYGSMQDTTELLHGAGQ------TKNFVKVYKSGSVGRSLDIS 712

Query: 698 RFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIK 757
           RFSSY+ELREELG+MF I+G  ED  RSGWQLVFVD+E+DVLLLGDDPWE+FV++VWYIK
Sbjct: 713 RFSSYHELREELGKMFDIKGLLEDAFRSGWQLVFVDKEDDVLLLGDDPWESFVNSVWYIK 772

Query: 758 ILSPEDVQKMGEQG 771
           ILSPEDVQKMGE G
Sbjct: 773 ILSPEDVQKMGEHG 786


>gi|9758525|dbj|BAB08972.1| auxin responsive transcription factor [Arabidopsis thaliana]
          Length = 821

 Score = 1022 bits (2642), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 544/781 (69%), Positives = 610/781 (78%), Gaps = 59/781 (7%)

Query: 6   KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 65
           KCLNSELWHACAGPLVSLP+ G+RVVYFPQGHSEQVAATTNKEVD HIPNYP+LPPQLIC
Sbjct: 17  KCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPSLPPQLIC 76

Query: 66  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTS 125
           QLHNVTMHADVETDEVYAQMTLQPL+PEEQK+TFVPIELGIPSKQP+NYFCKTLTASDTS
Sbjct: 77  QLHNVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIELGIPSKQPSNYFCKTLTASDTS 136

Query: 126 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 185
           THGGFSVPRRAAEKVFP LD++LQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS
Sbjct: 137 THGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 196

Query: 186 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 245
           VFVSAKRLVAGDSV+FI NEKNQL LGIR A RP T++PSSVLSSDSMHIGLLAAAAHA+
Sbjct: 197 VFVSAKRLVAGDSVIFIRNEKNQLFLGIRHATRPQTIVPSSVLSSDSMHIGLLAAAAHAS 256

Query: 246 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 305
           ATNSCFTVFF+PRAS SEFVI L+KY+KAVFHTR+SVGMRFRMLFETEESSVRRYMGTIT
Sbjct: 257 ATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTIT 316

Query: 306 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPW 365
           GISDLD VRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPW
Sbjct: 317 GISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPW 376

Query: 366 HPSTSSFNDNRDETASGLNWLRGGTGEQGLTT-LNFQSLGMFPWMQQRVEPSFLGNDHNQ 424
           H  TSS  D R +  SGL WLRGG GEQ     LN+ S+G+FPWMQQR++ S +G D+NQ
Sbjct: 377 HAGTSSLPDGRGDLGSGLTWLRGGGGEQQGLLPLNYPSVGLFPWMQQRLDLSQMGTDNNQ 436

Query: 425 QYQAMLAAGMQS---GDPVRQQFMQLQQP-FQYLQQSGSQNP-LQLKQ------QQHLLQ 473
           QYQAMLAAG+Q+   GDP+RQQF+QLQ+P  QYLQQS S N  L L+Q       +HL+ 
Sbjct: 437 QYQAMLAAGLQNIGGGDPLRQQFVQLQEPHHQYLQQSASHNSDLMLQQQQQQQASRHLM- 495

Query: 474 QLNSQAEDRAQQQQQPQQHM----------------------YHDALQIRTDELLQ-RQQ 510
                A+ +   +  PQQ+M                      Y +A +++   L Q +QQ
Sbjct: 496 ----HAQTQIMSENLPQQNMRQEVSNQPAGQQQQLQQPDQNAYLNAFKMQNGHLQQWQQQ 551

Query: 511 SNLPSPSFSKANFMDSSTEISVSISPMQNMLGSLPEGSGNLLNFSGAGPSMLRQQFPQQS 570
           S +PSPSF K++F DSS + + + SP          G GNLLNFS  G S+L    P+Q 
Sbjct: 552 SEMPSPSFMKSDFTDSSNKFATTASPA--------SGDGNLLNFSITGQSVL----PEQL 599

Query: 571 LGSKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTV 630
               + P     F   +SLP +Y GK  A+   N     QN  +FGV  D SGL LP+TV
Sbjct: 600 TTEGWSPKASNTFSEPLSLPQAYPGKSLALEPGN----PQNPSLFGVDPD-SGLFLPSTV 654

Query: 631 SSFTTSV-DPGVSSMPLGDSGFHNSMYGCMQDSS-ELLHNVGQIDQLTPTRTFVKVYKSG 688
             F +S  D   S M L DSGF NS+Y CMQD++ ELLH  GQI+    T+ FVKVYKSG
Sbjct: 655 PRFASSSGDAEASPMSLTDSGFQNSLYSCMQDTTHELLHGAGQINSSNQTKNFVKVYKSG 714

Query: 689 SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEA 748
           SVGRSLDISRFSSY+ELREELG+MF IEG  EDPLRSGWQLVFVD+END+LLLGDDPWE 
Sbjct: 715 SVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFVDKENDILLLGDDPWEY 774

Query: 749 F 749
           +
Sbjct: 775 Y 775


>gi|145334653|ref|NP_001078672.1| auxin response factor 8 [Arabidopsis thaliana]
 gi|332006755|gb|AED94138.1| auxin response factor 8 [Arabidopsis thaliana]
          Length = 773

 Score = 1019 bits (2636), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 544/779 (69%), Positives = 609/779 (78%), Gaps = 59/779 (7%)

Query: 6   KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 65
           KCLNSELWHACAGPLVSLP+ G+RVVYFPQGHSEQVAATTNKEVD HIPNYP+LPPQLIC
Sbjct: 17  KCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPSLPPQLIC 76

Query: 66  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTS 125
           QLHNVTMHADVETDEVYAQMTLQPL+PEEQK+TFVPIELGIPSKQP+NYFCKTLTASDTS
Sbjct: 77  QLHNVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIELGIPSKQPSNYFCKTLTASDTS 136

Query: 126 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 185
           THGGFSVPRRAAEKVFP LD++LQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS
Sbjct: 137 THGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 196

Query: 186 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 245
           VFVSAKRLVAGDSV+FI NEKNQL LGIR A RP T++PSSVLSSDSMHIGLLAAAAHA+
Sbjct: 197 VFVSAKRLVAGDSVIFIRNEKNQLFLGIRHATRPQTIVPSSVLSSDSMHIGLLAAAAHAS 256

Query: 246 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 305
           ATNSCFTVFF+PRAS SEFVI L+KY+KAVFHTR+SVGMRFRMLFETEESSVRRYMGTIT
Sbjct: 257 ATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTIT 316

Query: 306 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPW 365
           GISDLD VRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPW
Sbjct: 317 GISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPW 376

Query: 366 HPSTSSFNDNRDETASGLNWLRGGTGEQGLTT-LNFQSLGMFPWMQQRVEPSFLGNDHNQ 424
           H  TSS  D R +  SGL WLRGG GEQ     LN+ S+G+FPWMQQR++ S +G D+NQ
Sbjct: 377 HAGTSSLPDGRGDLGSGLTWLRGGGGEQQGLLPLNYPSVGLFPWMQQRLDLSQMGTDNNQ 436

Query: 425 QYQAMLAAGMQS---GDPVRQQFMQLQQP-FQYLQQSGSQNP-LQLKQ------QQHLLQ 473
           QYQAMLAAG+Q+   GDP+RQQF+QLQ+P  QYLQQS S N  L L+Q       +HL+ 
Sbjct: 437 QYQAMLAAGLQNIGGGDPLRQQFVQLQEPHHQYLQQSASHNSDLMLQQQQQQQASRHLM- 495

Query: 474 QLNSQAEDRAQQQQQPQQHM----------------------YHDALQIRTDELLQ-RQQ 510
                A+ +   +  PQQ+M                      Y +A +++   L Q +QQ
Sbjct: 496 ----HAQTQIMSENLPQQNMRQEVSNQPAGQQQQLQQPDQNAYLNAFKMQNGHLQQWQQQ 551

Query: 511 SNLPSPSFSKANFMDSSTEISVSISPMQNMLGSLPEGSGNLLNFSGAGPSMLRQQFPQQS 570
           S +PSPSF K++F DSS + + + SP          G GNLLNFS  G S+L    P+Q 
Sbjct: 552 SEMPSPSFMKSDFTDSSNKFATTASPA--------SGDGNLLNFSITGQSVL----PEQL 599

Query: 571 LGSKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTV 630
               + P     F   +SLP +Y GK  A+   N     QN  +FGV  D SGL LP+TV
Sbjct: 600 TTEGWSPKASNTFSEPLSLPQAYPGKSLALEPGN----PQNPSLFGVDPD-SGLFLPSTV 654

Query: 631 SSFTTSV-DPGVSSMPLGDSGFHNSMYGCMQDSS-ELLHNVGQIDQLTPTRTFVKVYKSG 688
             F +S  D   S M L DSGF NS+Y CMQD++ ELLH  GQI+    T+ FVKVYKSG
Sbjct: 655 PRFASSSGDAEASPMSLTDSGFQNSLYSCMQDTTHELLHGAGQINSSNQTKNFVKVYKSG 714

Query: 689 SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWE 747
           SVGRSLDISRFSSY+ELREELG+MF IEG  EDPLRSGWQLVFVD+END+LLLGDDPWE
Sbjct: 715 SVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFVDKENDILLLGDDPWE 773


>gi|301793221|emb|CBA12001.1| putative auxin response factor 8 [Illicium parviflorum]
          Length = 794

 Score =  995 bits (2573), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 536/796 (67%), Positives = 609/796 (76%), Gaps = 51/796 (6%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ K LNSELWHACAGPLVSLP VG+RVVYFPQGHSEQVA +TNKEV+ HIPNYP+L PQ
Sbjct: 17  GEKKSLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNKEVNGHIPNYPSLSPQ 76

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           LICQLHNVTMHAD+ETDEVYAQMTLQPL+ +EQKD+++P ELG+PSKQPTNYFCKTLTAS
Sbjct: 77  LICQLHNVTMHADMETDEVYAQMTLQPLNQQEQKDSYLPAELGVPSKQPTNYFCKTLTAS 136

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSVPRRAAEKVFP LDF+ QPPAQEL+ARDLHDVEWKFRHIFRGQPKRHLLTT
Sbjct: 137 DTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELVARDLHDVEWKFRHIFRGQPKRHLLTT 196

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAAA
Sbjct: 197 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAA 256

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 302
           HAAATNS FT+F+NPRASPSEFVIPL+KY KAVFHTR+S  MRFRMLFET+ESSVRRYMG
Sbjct: 257 HAAATNSRFTIFYNPRASPSEFVIPLSKYAKAVFHTRISDDMRFRMLFETDESSVRRYMG 316

Query: 303 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 362
            ITGISDLDPVRWSNSHWRSVKV WDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK
Sbjct: 317 RITGISDLDPVRWSNSHWRSVKVIWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 376

Query: 363 RPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGNDH 422
           RPWHP   +F DN+D+ ++   WLRG   E+G  +LNFQ+ G+ PWMQ R +P  LG D 
Sbjct: 377 RPWHPGLPTFPDNKDDESNAFMWLRGNADERGFQSLNFQAFGIGPWMQPRFDPLLLGTDP 436

Query: 423 NQQYQAMLAAGMQ---SGDPVRQQFMQLQQPFQYLQQSGS-QNPL------QLKQQQHLL 472
           + QYQAM AA +Q   + DP +Q F+  QQP Q  QQS    NPL      Q  Q +  L
Sbjct: 437 D-QYQAMAAAALQDIRNRDPTKQLFLNFQQPLQTPQQSSCGSNPLLQHQIIQQTQPRQFL 495

Query: 473 QQLNSQAEDRAQQQQQPQQHMYHDALQIRTDELLQRQQSNLPSPSFSKANFMDSSTEISV 532
           QQ ++  E+  Q  Q  QQ  +H+  QI  +   Q Q S LP+    KA F DS++  S 
Sbjct: 496 QQAHAILENHPQSHQ--QQQTHHELFQISNN---QPQPSPLPTGLCQKAVFSDSNSTFSS 550

Query: 533 SISP--MQNMLGSL-PEGSGNLLNFSGAGPSMLRQQFPQQSLGSKYEPSQVRDFVHSMSL 589
           +  P  MQN+LGS+ PEGS  +L+F  AG S++  Q   Q   SK  PS V  F +S+SL
Sbjct: 551 TPIPSGMQNILGSVCPEGSAQILSFPNAGQSVMVDQH-HQPWVSKCGPSPVDPFGNSISL 609

Query: 590 PSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFTTSVDPGVSSMPLGDS 649
           P  + G++ +V             +  V  DS+  L P T  S                 
Sbjct: 610 P-PFPGRECSV----------EQTIGNVTGDSNLSLTPFTAPS----------------- 641

Query: 650 GFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREEL 709
              NS+YGC+ +SS LL N GQ+D   PTRTFVKVYKSGSVGRSLDI++FSSY+ELREEL
Sbjct: 642 -LQNSLYGCIDESSGLLQNEGQMD--PPTRTFVKVYKSGSVGRSLDIAQFSSYHELREEL 698

Query: 710 GQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGE 769
           GQMFG+ GK  DPLRSGWQLVFVDRENDVLLLGDDPWE+FV+NVWYIKILSP+DVQ MG+
Sbjct: 699 GQMFGLGGKLRDPLRSGWQLVFVDRENDVLLLGDDPWESFVNNVWYIKILSPDDVQNMGK 758

Query: 770 QGVESFSPSSGQRANS 785
             VE  +P  G+R NS
Sbjct: 759 HDVEPLNPMGGRRHNS 774


>gi|379323212|gb|AFD01305.1| auxin response factor 8-1 [Brassica rapa subsp. pekinensis]
          Length = 780

 Score =  962 bits (2487), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 522/788 (66%), Positives = 596/788 (75%), Gaps = 41/788 (5%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ KCLNSELWHACAGPLVSLP+ G+RVVYFPQGHSEQVAATTNKEV+ HIPNYP LPPQ
Sbjct: 15  GEKKCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVEGHIPNYPTLPPQ 74

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           LICQLHNVTMHAD+ETDEVYAQM LQPL+ EEQKDTFVPIELG+PSKQP+NYFCKTLTAS
Sbjct: 75  LICQLHNVTMHADLETDEVYAQMVLQPLTQEEQKDTFVPIELGVPSKQPSNYFCKTLTAS 134

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSVPRRAAEKVFP LD++ QPPAQELIA+DLHD EWKFRHIFRGQPKRHLLTT
Sbjct: 135 DTSTHGGFSVPRRAAEKVFPPLDYTQQPPAQELIAKDLHDNEWKFRHIFRGQPKRHLLTT 194

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWSVFVSAKRLV GDSV+FI NE+NQLLLGIR A RP T++PSS+LSSDSMHIGLLAAAA
Sbjct: 195 GWSVFVSAKRLVTGDSVIFIRNERNQLLLGIRHATRPQTIVPSSMLSSDSMHIGLLAAAA 254

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 302
           HAAATNSCFTVF++PR+S SEFV+PL KY+KAVFHTR+SVGMRFRMLFETEESSVRRYMG
Sbjct: 255 HAAATNSCFTVFYHPRSSSSEFVLPLPKYIKAVFHTRISVGMRFRMLFETEESSVRRYMG 314

Query: 303 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 362
           TITGI DLD V W NSHWRSVKVGWDESTAGERQ R SLWEIEPLTTFPMYPSLFPLRLK
Sbjct: 315 TITGIGDLDSVLWPNSHWRSVKVGWDESTAGERQARASLWEIEPLTTFPMYPSLFPLRLK 374

Query: 363 RPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGNDH 422
           RPWHP  SSF D+R +    L WLRGG GE GL  LN+ S  +FPWMQQR++ S LG D 
Sbjct: 375 RPWHPGASSFQDSRGD----LTWLRGGAGENGLLPLNYPSPNVFPWMQQRLDLSLLGTDQ 430

Query: 423 NQQYQAMLAAGMQS-----GDPVRQQFMQLQQP-FQYLQQSGS----QNPLQLKQQQHLL 472
           NQQYQAMLAAG+Q+     GDP+RQQF+ LQ+P  QYLQQ  +     + LQ   QQ  +
Sbjct: 431 NQQYQAMLAAGLQNFGGGGGDPLRQQFVHLQEPNHQYLQQQSAPIIHSSDLQQHHQQQQM 490

Query: 473 QQLNSQAEDRAQQQQQPQQHMYHDALQIRTDELLQRQQSNLPSPSFSKANFMDSSTEISV 532
            +   QA+ +   +  PQQ+M  +            Q S+L SPS     F  ++T   V
Sbjct: 491 PRHLLQAQPQILTENLPQQNMRQEVSNQAQQPDRVWQHSDLLSPSDFTNKFTSAATNPQV 550

Query: 533 SISPMQNM-LGSLPEGSGNLLNFSGAGPSMLRQQFPQQ--SLGSKYEPSQVRDFVHSMSL 589
                QN+ L    + S +LLNFS  G S   +Q P    SL   + P +   F   +SL
Sbjct: 551 Q---QQNLTLQGSGDSSSHLLNFSITGQS---EQLPTHDWSLKHSHHP-ETNYFSEPLSL 603

Query: 590 PSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFTTSVDPGVSSMPLGDS 649
              Y     ++        +QN  +FGV  D SGL LPTTV  F  +     SSMPL DS
Sbjct: 604 GQGYGRASPSL---EPPPSTQNLSLFGVDSD-SGLFLPTTVPRFGDT-----SSMPLADS 654

Query: 650 GFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREEL 709
           GF N+    +Q+++E+  + G    +  T  FVKVYKSGSVGRSLDISRFSSYNELREEL
Sbjct: 655 GFQNT----LQETTEVAAHGG----VEHTNNFVKVYKSGSVGRSLDISRFSSYNELREEL 706

Query: 710 GQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGE 769
           G+MF I+G  ED  RSGWQLVFVD+E+D+LLLGDDPWE+FV++VWYIKILSP+DV KMGE
Sbjct: 707 GRMFDIKGLLEDAFRSGWQLVFVDKEDDILLLGDDPWESFVNSVWYIKILSPDDVHKMGE 766

Query: 770 QGVESFSP 777
            G  S  P
Sbjct: 767 HGEGSSFP 774


>gi|359359225|gb|AEV41129.1| putative auxin response factor [Oryza officinalis]
          Length = 819

 Score =  940 bits (2429), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 519/804 (64%), Positives = 604/804 (75%), Gaps = 54/804 (6%)

Query: 6   KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 65
           KCLNSELWHACAGPLV LPTVGTRVVYFPQGHSEQVAA+TNKEV+ HIPNYPNLP QLIC
Sbjct: 25  KCLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLIC 84

Query: 66  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTS 125
           QLH+VTMHADVETDEVYAQMTLQPL+P+EQ D ++P E+GI SKQPTNYFCKTLTASDTS
Sbjct: 85  QLHDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQPTNYFCKTLTASDTS 144

Query: 126 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 185
           THGGFSVPRRAAE+VFP LDF+ QPPAQELIARD+HD+EWKFRHIFRGQPKRHLLTTGWS
Sbjct: 145 THGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLLTTGWS 204

Query: 186 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 245
           VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAAAHAA
Sbjct: 205 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAA 264

Query: 246 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 305
           ATNS FT+F+NPRASPSEFVIPL+KY+KAVFHTR+SVGMRFRMLFETEESSVRRYMGTIT
Sbjct: 265 ATNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTIT 324

Query: 306 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPW 365
            +SD DPVRW +S+WRSVKVGWDESTAGER PRVSLWEIEPLTTFPMYPSLFPLR+K PW
Sbjct: 325 EVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFPMYPSLFPLRVKHPW 384

Query: 366 HPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGNDHNQQ 425
           +   +S +D+    ++ L WLRG  GE G  +LNFQS G+  W QQR+ PS L  DH+ Q
Sbjct: 385 YSGVASLHDD----SNALMWLRGVAGEGGFQSLNFQSPGIGSWGQQRLHPSLLSTDHD-Q 439

Query: 426 YQAMLAAGM---QSGDPVRQQFMQLQQPFQYLQQSGSQNPL--------------QLKQQ 468
           YQA++AA     QSG  V+QQF+ LQQP Q  Q+  + NPL                 + 
Sbjct: 440 YQAVVAAAAAASQSGGFVKQQFLHLQQPMQSPQEHCNLNPLLHQQILQQASQQQIISPEA 499

Query: 469 QHLLQQLNSQA--------------EDRAQQQQQPQQHMYHDALQIRTDELLQRQQSNLP 514
           Q++   L+  A              ++  +Q+ QP Q     + Q+ +  +L    S LP
Sbjct: 500 QNIQTMLSPSAIQQQLQQLQQMQQVQNDQKQKIQPDQ-----SYQVPSSAVLPSPTS-LP 553

Query: 515 SPSFSKANFMD--SSTEISVSISPMQNML-GSLPEGSG---NLLNFSGAGPSMLRQQFPQ 568
           S    K  F D  +++   ++ S   NML  S  +GS    +L  F+    S  +QQ  Q
Sbjct: 554 SHLREKFGFSDPNANSSSFITSSSSDNMLDSSFLQGSSKAVDLSRFNQPVASEQQQQQQQ 613

Query: 569 QSLGSKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPT 628
           Q+   K+  SQ   F  S+ L +S   KD +V  +    D QN  +F   +DSS LL   
Sbjct: 614 QAWKQKFMGSQSVSFGGSV-LHNSPTSKDGSVENK-IGRDVQNQSLFSPQVDSSSLLY-N 670

Query: 629 TVSSFTTSV-DPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKS 687
            V + T++V D  +S++P G +   N+MYGC+ DSS LL N G+ D    TRTFVKVYKS
Sbjct: 671 MVPNLTSNVADGNLSTIPSGSTYLQNAMYGCLDDSSGLLQNTGENDPT--TRTFVKVYKS 728

Query: 688 GSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWE 747
           GSVGRSLDI+RFS+Y ELREELGQMFGI+G+ +DP RSGWQLVFVDRENDVLLLGDDPWE
Sbjct: 729 GSVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRENDVLLLGDDPWE 788

Query: 748 AFVSNVWYIKILSPEDVQKMGEQG 771
           +FV++VWYIKILSPEDV KMG+QG
Sbjct: 789 SFVNSVWYIKILSPEDVHKMGKQG 812


>gi|300373066|gb|ADG43164.1| auxin response factor 30 [Zea mays]
          Length = 809

 Score =  939 bits (2426), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 517/795 (65%), Positives = 598/795 (75%), Gaps = 36/795 (4%)

Query: 4   DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQL 63
           + KCLNSELWHACAGPLV LPTV TRVVYFPQGHSEQVAA+TNKEVD HIPNYPNLPPQL
Sbjct: 17  EKKCLNSELWHACAGPLVCLPTVATRVVYFPQGHSEQVAASTNKEVDGHIPNYPNLPPQL 76

Query: 64  ICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASD 123
           ICQLH+VTMHADVETDEVYAQMTLQPL+P+EQ D ++P E+GI SKQPTNYFCKTLTASD
Sbjct: 77  ICQLHDVTMHADVETDEVYAQMTLQPLNPQEQNDPYLPAEMGIMSKQPTNYFCKTLTASD 136

Query: 124 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 183
           TSTHGGFSVPRRAAE+VFP LDF+ QPP QELIARD+HDVEWKFRHIFRGQPKRHLLTTG
Sbjct: 137 TSTHGGFSVPRRAAERVFPPLDFTQQPPVQELIARDIHDVEWKFRHIFRGQPKRHLLTTG 196

Query: 184 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAH 243
           WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAAAH
Sbjct: 197 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAH 256

Query: 244 AAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGT 303
           AAATNS FT+FFNPRASPSEFVIPL+KY+KAVFHTR+SVGMRFRMLFETEESSVRRYMGT
Sbjct: 257 AAATNSRFTIFFNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGT 316

Query: 304 ITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKR 363
           IT +SD DPVRW +S+WRSVKVGWDESTAGER PRVSLWEIEPLTTFPMYPSLFPLR+K 
Sbjct: 317 ITEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFPMYPSLFPLRVKH 376

Query: 364 PWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGNDHN 423
           PW+   ++ +D+    ++ L WLRG  GE G  +LNFQS G+  W QQR+ PS L NDH+
Sbjct: 377 PWYSGVAALHDD----SNALMWLRGVAGEGGFQSLNFQSPGVGSWGQQRLHPSLLSNDHD 432

Query: 424 QQYQAMLAAGMQSGDP-VRQQFMQLQQPFQYLQQSGSQNPLQLK--------------QQ 468
           Q    + AA     D  ++QQF+ LQQP Q  Q+  + NPL  +                
Sbjct: 433 QYQAVVAAAAASQSDGYLKQQFLHLQQPMQSPQEQCNLNPLLQQQILQQGSQQQMVSPDA 492

Query: 469 QHLLQQLNSQAEDRAQQQQQPQQHMYHDALQ-IRTDELLQRQQS-------NLPSPSFSK 520
           Q++   LN  A  +  QQ Q  QH ++D  Q I+ D+  Q   S       +LPS    K
Sbjct: 493 QNIQSVLNPNAIQQQLQQFQQMQHAHNDQKQKIQPDQPYQVPSSAVLSSPTSLPSHLREK 552

Query: 521 ANFMD--SSTEISVSISPMQNMLGS-LPEGSGNLLNFSGAGPSMLRQQFPQQSLGSKYEP 577
             F D   ++   +S S  +NML S   +GS   ++ S     ++ +Q  QQ+   K+  
Sbjct: 553 FGFSDPNVNSSSFISSSSNENMLESNFLQGSSKSVDLSRFNQPVVSEQQQQQAWKQKFIC 612

Query: 578 SQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFTTSV 637
           SQ   F  S+SL +S   KD  V  +    D QN  +F   +DSS LL    V + T++V
Sbjct: 613 SQSMSFGGSVSL-NSPTTKDGPVDNK-IGRDVQNQTLFSPQVDSSSLLY-NMVPNLTSNV 669

Query: 638 -DPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGSVGRSLDI 696
            D  +S++P G +   + MYGC+ DSS LL N G+ D    TRTFVKVYKSGSVGRSLDI
Sbjct: 670 ADNNISTIPSGSTYLQSPMYGCLDDSSGLLQNTGENDPT--TRTFVKVYKSGSVGRSLDI 727

Query: 697 SRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYI 756
           +RFS+Y ELREELGQMFGI+G+ +DP RSGWQLVFVDRENDVLLLGDDPWE+FV++VWYI
Sbjct: 728 TRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRENDVLLLGDDPWESFVNSVWYI 787

Query: 757 KILSPEDVQKMGEQG 771
           KILSPEDV KMG+ G
Sbjct: 788 KILSPEDVHKMGKPG 802


>gi|359359176|gb|AEV41081.1| putative auxin response factor [Oryza minuta]
          Length = 821

 Score =  938 bits (2425), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 515/805 (63%), Positives = 598/805 (74%), Gaps = 54/805 (6%)

Query: 6   KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 65
           KCLNSELWHACAGPLV LPTVGTRVVYFPQGHSEQVAA+TNKEV+ HIPNYPNLP QLIC
Sbjct: 25  KCLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLIC 84

Query: 66  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTS 125
           QLH+VTMHADVETDEVYAQMTLQPL+P+EQ D ++P E+GI SKQPTNYFCKTLTASDTS
Sbjct: 85  QLHDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQPTNYFCKTLTASDTS 144

Query: 126 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 185
           THGGFSVPRRAAE+VFP LDF+ QPPAQELIARD+HD+EWKFRHIFRGQPKRHLLTTGWS
Sbjct: 145 THGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLLTTGWS 204

Query: 186 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 245
           VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAAAHAA
Sbjct: 205 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAA 264

Query: 246 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 305
           ATNS FT+F+NPRASPSEFVIPL+KY+KAVFHTR+SVGMRFRMLFETEESSVRRYMGTIT
Sbjct: 265 ATNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTIT 324

Query: 306 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPW 365
            +SD DPVRW +S+WRSVKVGWDESTAGER PRVSLWEIEPLTTFPMYPSLFPLR+K PW
Sbjct: 325 EVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFPMYPSLFPLRVKHPW 384

Query: 366 HPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGNDHNQQ 425
           +   +S +D+    ++ L WLRG  GE G  +LNFQS G+  W QQR+ PS L  DH+ Q
Sbjct: 385 YSGVASLHDD----SNALMWLRGVAGEGGFQSLNFQSPGIGSWGQQRLHPSLLSTDHD-Q 439

Query: 426 YQAMLAAGM---QSGDPVRQQFMQLQQPFQYLQQSGSQNPL--------------QLKQQ 468
           YQA++AA     QSG  V+QQF+ LQQP Q  Q+  + NPL                 + 
Sbjct: 440 YQAVVAAAAAASQSGGFVKQQFLHLQQPMQSPQEHCNLNPLLHQQILQQASQQQIISPEA 499

Query: 469 QHLLQQLNSQA--------------EDRAQQQQQPQQHMYHDALQIRTDELLQRQQSNLP 514
           Q++   L+  A              ++  +Q+ QP Q     + Q+ +  +L    S LP
Sbjct: 500 QNIQTMLSPSAIQQQLQQLQQMQQVQNDQKQKIQPDQ-----SYQVPSSAVLPSPTS-LP 553

Query: 515 SPSFSKANFMD--SSTEISVSISPMQNML-GSLPEGSGNLLNFSG-----AGPSMLRQQF 566
           S    K  F D  +++   ++ S   NML  S  +GS   ++ S      A     +QQ 
Sbjct: 554 SHLREKFGFSDPNANSSNFITSSSSDNMLDSSFLQGSSKAVDLSRFNQPVASEQQQQQQQ 613

Query: 567 PQQSLGSKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLL 626
            QQ+   K+  SQ   F  S  L +S   KD +V  +    D QN  +F   +DSS LL 
Sbjct: 614 QQQAWKQKFMGSQSVSFGGSF-LHNSPTSKDGSVENK-IGRDVQNQSLFSPQVDSSSLLY 671

Query: 627 PTTVSSFTTSVDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYK 686
               +  +   D  +S++P G +   N+MYGC+ DSS LL N G+ D    TRTFVKVYK
Sbjct: 672 NMVPNLASNVADGNLSTIPSGSTYLQNAMYGCLDDSSGLLQNTGENDPT--TRTFVKVYK 729

Query: 687 SGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPW 746
           SGSVGRSLDI+RFS+Y ELREELGQMFGI+G+ +DP RSGWQLVFVDRENDVLLLGDDPW
Sbjct: 730 SGSVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRENDVLLLGDDPW 789

Query: 747 EAFVSNVWYIKILSPEDVQKMGEQG 771
           E+FV++VWYIKILSPEDV KMG+QG
Sbjct: 790 ESFVNSVWYIKILSPEDVHKMGKQG 814


>gi|122195722|sp|Q258Y5.1|ARFL_ORYSI RecName: Full=Auxin response factor 12; AltName: Full=OsARF8
 gi|90265252|emb|CAH67705.1| H0624F09.13 [Oryza sativa Indica Group]
          Length = 816

 Score =  936 bits (2418), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 510/799 (63%), Positives = 596/799 (74%), Gaps = 48/799 (6%)

Query: 6   KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 65
           KCLNSELWHACAGPLV LPTVGTRVVYFPQGHSEQVAA+TNKEV+ HIPNYPNLP QLIC
Sbjct: 26  KCLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLIC 85

Query: 66  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTS 125
           QLH+VTMHADVETDEVYAQMTLQPL+P+EQ D ++P E+GI SKQPTNYFCKTLTASDTS
Sbjct: 86  QLHDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQPTNYFCKTLTASDTS 145

Query: 126 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 185
           THGGFSVPRRAAE+VFP LDF+ QPPAQELIARD+HD+EWKFRHIFRGQPKRHLLTTGWS
Sbjct: 146 THGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLLTTGWS 205

Query: 186 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 245
           VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAAAHAA
Sbjct: 206 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAA 265

Query: 246 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 305
           ATNS FT+F+NPRASPSEFVIPL+KY+KAVFHTR+SVGMRFRMLFETEESSVRRYMGTIT
Sbjct: 266 ATNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTIT 325

Query: 306 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPW 365
            +SD DPVRW +S+WRSVKVGWDESTAGER PRVSLWEIEPLTTFPMYPSLFPLR+K PW
Sbjct: 326 EVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFPMYPSLFPLRVKHPW 385

Query: 366 HPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGNDHNQQ 425
           +   +S +D+    ++ L WLRG  GE G  +LNFQS G+  W QQR+ PS L +DH+Q 
Sbjct: 386 YSGVASLHDD----SNALMWLRGVAGEGGFQSLNFQSPGIGSWGQQRLHPSLLSSDHDQY 441

Query: 426 YQAMLAAGMQSGDP-VRQQFMQLQQPFQYLQQSGSQNPLQLK--------------QQQH 470
              + AA        ++QQF+ LQQP Q  Q+  + NPL  +                Q+
Sbjct: 442 QAVVAAAAASQSGGYLKQQFLHLQQPMQSPQEHCNLNPLLQQQILQQASQQQIINPDAQN 501

Query: 471 LLQQLNSQA--------------EDRAQQQQQPQQHMYHDALQIRTDELLQRQQSNLPSP 516
           +   L+  A              ++  +Q+ QP Q     + Q+ T  +L    S LPS 
Sbjct: 502 IQTMLSPSAIQQQLQQLQQMQQVQNDQKQKIQPDQ-----SYQVPTSAVLPSPTS-LPSH 555

Query: 517 SFSKANFMD--SSTEISVSISPMQNML-GSLPEGSGNLLNFSGAGPSMLRQQFPQQSLGS 573
              K  F D  +++   ++ S   NML  S  +GS   ++ S     +  +Q  QQ+   
Sbjct: 556 LREKFGFSDPNANSSSFITSSSSDNMLDSSFLQGSSKAVDLSRFNQPVASEQQQQQAWKQ 615

Query: 574 KYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSF 633
           K+  SQ   F  S+ L +S   KD +V  +    D QN  +F   +DSS LL    V + 
Sbjct: 616 KFMGSQSVSFGGSV-LHNSPTSKDGSVENK-IGRDVQNQSLFSPQVDSSSLLY-NMVPNL 672

Query: 634 TTSVDPG-VSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGSVGR 692
           T++V  G +S++P G +   N+MYGC+ DSS LL N G+ D    TRTFVKVYKSGSVGR
Sbjct: 673 TSNVSDGNLSTIPSGSTYLQNAMYGCLDDSSGLLQNTGEND--PATRTFVKVYKSGSVGR 730

Query: 693 SLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSN 752
           SLDI+RFS+Y ELREELGQMFGI+G+ +DP RSGWQLVFVDRENDVLLLGDDPWE+FV++
Sbjct: 731 SLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRENDVLLLGDDPWESFVNS 790

Query: 753 VWYIKILSPEDVQKMGEQG 771
           VWYIKILSPEDV KMG+QG
Sbjct: 791 VWYIKILSPEDVHKMGKQG 809


>gi|359359078|gb|AEV40985.1| putative auxin response factor [Oryza punctata]
          Length = 818

 Score =  936 bits (2418), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 514/803 (64%), Positives = 602/803 (74%), Gaps = 53/803 (6%)

Query: 6   KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 65
           KCLNSELWHACAGPLV LPTVGTRVVYFPQGHSEQVAA+TNKEV+ HIPNYPNLP QLIC
Sbjct: 25  KCLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLIC 84

Query: 66  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTS 125
           QLH+VTMHADVETDEVYAQMTLQPL+P+EQ D ++P E+GI SKQPTNYFCKTLTASDTS
Sbjct: 85  QLHDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQPTNYFCKTLTASDTS 144

Query: 126 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 185
           THGGFSVPRRAAE+VFP LDF+ QPPAQELIARD+HD+EWKFRHIFRGQPKRHLLTTGWS
Sbjct: 145 THGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLLTTGWS 204

Query: 186 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 245
           VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAAAHAA
Sbjct: 205 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAA 264

Query: 246 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 305
           ATNS FT+F+NPRASPSEFVIPL+KY+KAVFHTR+SVGMRFRMLFETEESSVRRYMGTIT
Sbjct: 265 ATNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTIT 324

Query: 306 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPW 365
            +SD DPVRW +S+WRSVKVGWDESTAGER PRVSLWEIEPLTTFPMYPSLFPLR+K PW
Sbjct: 325 EVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFPMYPSLFPLRVKHPW 384

Query: 366 HPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGNDHNQQ 425
           +   +S +D+    ++ L WLRG  GE G  +LNFQS G+  W QQR+ PS L NDH+ Q
Sbjct: 385 YSGVASLHDD----SNALMWLRGVAGEGGFQSLNFQSPGIGSWGQQRLHPSLLSNDHD-Q 439

Query: 426 YQAMLAAGM---QSGDPVRQQFMQLQQPFQYLQQSGSQNPLQLK--------------QQ 468
           YQA++AA     QSG  ++QQF+ LQQP Q  Q+  + NPL  +              + 
Sbjct: 440 YQAVVAAAAAASQSGGYLKQQFLHLQQPMQSPQEHCNLNPLLQQQILQQAGQQQIISPEA 499

Query: 469 QHLLQQLNSQA--------------EDRAQQQQQPQQHMYHDALQIRTDELLQRQQSNLP 514
           Q++   L+  A              ++  +Q+ QP Q     + Q+ +  +L    S LP
Sbjct: 500 QNIQTMLSPSAIQQQLQQLQQMQQVQNDQKQKIQPDQ-----SYQVPSSAVLPSPTS-LP 553

Query: 515 SPSFSKANFMD--SSTEISVSISPMQNML-GSLPEGSGNLLNFSGAGPSMLRQQFPQQSL 571
           S    K  F D  +++   ++ S   NML  S  +GS   ++ S     +  +Q  QQ  
Sbjct: 554 SHLREKFGFSDPNANSSSFITSSSSDNMLDSSFLQGSSKAVDLSRFNQPVASEQQQQQQQ 613

Query: 572 G--SKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTT 629
               K+  SQ   F  S+ L +S   KD ++  +    D QN  +F   +DSS LL    
Sbjct: 614 AWKQKFMGSQSVSFGGSV-LHNSPTSKDGSIENK-IGRDVQNQSLFSPQVDSSSLLY-NM 670

Query: 630 VSSFTTSV-DPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSG 688
           V + T++V D  +S++P G +   N+MY C+ DSS LL N G+ D    TRTFVKVYKSG
Sbjct: 671 VPNLTSNVADGNLSTIPSGSTYLQNAMYACLDDSSGLLQNTGENDPT--TRTFVKVYKSG 728

Query: 689 SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEA 748
           SVGRSLDI+RFS+Y ELREELGQMFGI+G+ +DP RSGWQLVFVDRENDVLLLGDDPWE+
Sbjct: 729 SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRENDVLLLGDDPWES 788

Query: 749 FVSNVWYIKILSPEDVQKMGEQG 771
           FV++VWYIKILSPEDV KMG+QG
Sbjct: 789 FVNSVWYIKILSPEDVHKMGKQG 811


>gi|359359130|gb|AEV41036.1| putative auxin response factor [Oryza minuta]
          Length = 818

 Score =  935 bits (2417), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 513/803 (63%), Positives = 602/803 (74%), Gaps = 53/803 (6%)

Query: 6   KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 65
           KCLNSELWHACAGPLV LPTVGTRVVYFPQGHSEQVAA+TNKEV+ HIPNYPNLP QLIC
Sbjct: 25  KCLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLIC 84

Query: 66  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTS 125
           QLH+VTMHADVETDEVYAQMTLQPL+P+EQ D ++P E+GI SKQPTNYFCKTLTASDTS
Sbjct: 85  QLHDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQPTNYFCKTLTASDTS 144

Query: 126 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 185
           THGGFSVPRRAAE+VFP LDF+ QPPAQELIARD+HD+EWKFRHIFRGQPKRHLLTTGWS
Sbjct: 145 THGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLLTTGWS 204

Query: 186 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 245
           +FVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAAAHAA
Sbjct: 205 IFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAA 264

Query: 246 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 305
           ATNS FT+F+NPRASPSEFVIPL+KY+KAVFHTR+SVGMRFRMLFETEESSVRRYMGTIT
Sbjct: 265 ATNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTIT 324

Query: 306 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPW 365
            +SD DPVRW +S+WRSVKVGWDESTAGER PRVSLWEIEPLTTFPMYPSLFPLR+K PW
Sbjct: 325 EVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFPMYPSLFPLRVKHPW 384

Query: 366 HPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGNDHNQQ 425
           +   +S +D+    ++ L WLRG  GE G  +LNFQS G+  W QQR+ PS L NDH+ Q
Sbjct: 385 YSGVASLHDD----SNALMWLRGVAGEGGFQSLNFQSPGIGSWGQQRLHPSLLSNDHD-Q 439

Query: 426 YQAMLAAGM---QSGDPVRQQFMQLQQPFQYLQQSGSQNPLQLK--------------QQ 468
           YQA++AA     QSG  ++QQF+ LQQP Q  Q+  + NPL  +              + 
Sbjct: 440 YQAVVAAAAAASQSGGYLKQQFLHLQQPMQSPQEHCNLNPLLQQQILQQAGQQQIISPEA 499

Query: 469 QHLLQQLNSQA--------------EDRAQQQQQPQQHMYHDALQIRTDELLQRQQSNLP 514
           Q++   L+  A              ++  +Q+ QP Q     + Q+ +  +L    S LP
Sbjct: 500 QNIQMMLSPSAIQQQLQQLQQMQQVQNDQKQKIQPDQ-----SYQVPSSAVLPSPTS-LP 553

Query: 515 SPSFSKANFMD--SSTEISVSISPMQNML-GSLPEGSGNLLNFSGAGPSMLRQQFPQQSL 571
           S    K  F D  +++   ++ S   NML  S  +GS   ++ S     +  +Q  QQ  
Sbjct: 554 SHLREKFGFSDPNANSSSFITSSSSDNMLDSSFLQGSSKAVDLSRFNQPVASEQQQQQQQ 613

Query: 572 G--SKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTT 629
               K+  SQ   F  S+ L +S   KD ++  +    D QN  +F   +DSS LL    
Sbjct: 614 AWKQKFMGSQSVSFGGSV-LHNSPTSKDGSIENK-IGRDVQNQSLFSPQVDSSSLLY-NM 670

Query: 630 VSSFTTSV-DPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSG 688
           V + T++V D  +S++P G +   N+MY C+ DSS LL N G+ D    TRTFVKVYKSG
Sbjct: 671 VPNLTSNVADGNLSTIPSGSTYLQNAMYACLDDSSGLLQNTGENDPT--TRTFVKVYKSG 728

Query: 689 SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEA 748
           SVGRSLDI+RFS+Y ELREELGQMFGI+G+ +DP RSGWQLVFVDRENDVLLLGDDPWE+
Sbjct: 729 SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRENDVLLLGDDPWES 788

Query: 749 FVSNVWYIKILSPEDVQKMGEQG 771
           FV++VWYIKILSPEDV KMG+QG
Sbjct: 789 FVNSVWYIKILSPEDVHKMGKQG 811


>gi|115461244|ref|NP_001054222.1| Os04g0671900 [Oryza sativa Japonica Group]
 gi|122228290|sp|Q0J951.1|ARFL_ORYSJ RecName: Full=Auxin response factor 12; AltName: Full=OsARF8
 gi|113565793|dbj|BAF16136.1| Os04g0671900 [Oryza sativa Japonica Group]
 gi|222629754|gb|EEE61886.1| hypothetical protein OsJ_16583 [Oryza sativa Japonica Group]
          Length = 818

 Score =  931 bits (2406), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 510/801 (63%), Positives = 595/801 (74%), Gaps = 50/801 (6%)

Query: 6   KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 65
           KCLNSELWHACAGPLV LPTVGTRVVYFPQGHSEQVAA+TNKEV+ HIPNYPNLP QLIC
Sbjct: 26  KCLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLIC 85

Query: 66  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTS 125
           QLH+VTMHADVETDEVYAQMTLQPL+P+EQ D ++P E+GI SKQPTNYFCKTLTASDTS
Sbjct: 86  QLHDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQPTNYFCKTLTASDTS 145

Query: 126 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 185
           THGGFSVPRRAAE+VFP LDF+ QPPAQELIARD+HD+EWKFRHIFRGQPKRHLLTTGWS
Sbjct: 146 THGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLLTTGWS 205

Query: 186 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 245
           VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAAAHAA
Sbjct: 206 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAA 265

Query: 246 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 305
           ATNS FT+F+NPRASPSEFVIPL+KY+KAVFHTR+SVGMRFRMLFETEESSVRRYMGTIT
Sbjct: 266 ATNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTIT 325

Query: 306 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPW 365
            +SD DPVRW +S+WRSVKVGWDESTAGER PRVSLWEIEPLTTFPMYPSLFPLR+K PW
Sbjct: 326 EVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFPMYPSLFPLRVKHPW 385

Query: 366 HPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGNDHNQQ 425
           +   +S +D+    ++ L WLRG  GE G  +LNFQS G+  W QQR+ PS L +DH+Q 
Sbjct: 386 YSGVASLHDD----SNALMWLRGVAGEGGFQSLNFQSPGIGSWGQQRLHPSLLSSDHDQY 441

Query: 426 YQAMLAAGMQSGDP-VRQQFMQLQQPFQYLQQSGSQNPLQLK--------------QQQH 470
              + AA        ++QQF+ LQQP Q  Q+  + NPL  +                Q+
Sbjct: 442 QAVVAAAAASQSGGYLKQQFLHLQQPMQSPQEHCNLNPLLQQQILQQASQQQIINPDAQN 501

Query: 471 LLQQLNSQA--------------EDRAQQQQQPQQHMYHDALQIRTDELLQRQQSNLPSP 516
           +   L+  A              ++  +Q+ QP Q     + Q+ T  +L    S LPS 
Sbjct: 502 IQTMLSPSAIQQQLQQLQQMQQVQNDQKQKIQPDQ-----SYQVPTSAVLPSPTS-LPSH 555

Query: 517 SFSKANFMD--SSTEISVSISPMQNML-GSLPEGSGNLLNFSGAGPSMLRQQFPQQSLG- 572
              K  F D  +++   ++ S   NML  S  +GS   ++ S     +  +Q  QQ    
Sbjct: 556 LREKFGFSDPNANSSSFITSSSSDNMLDSSFLQGSSKAVDLSRFNQPVASEQQQQQQQAW 615

Query: 573 -SKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVS 631
             K+  SQ   F  S+ L +S   KD +V  +    D QN  +F   +DSS LL    V 
Sbjct: 616 KQKFMGSQSVSFGGSV-LHNSPTSKDGSVENK-IGRDVQNQSLFSPQVDSSSLLY-NMVP 672

Query: 632 SFTTSVDPG-VSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGSV 690
           + T++V  G +S++P G +   N+MYGC+ DSS LL N G+ D    TRTFVKVYKSGSV
Sbjct: 673 NLTSNVSDGNLSTIPSGSTYLQNAMYGCLDDSSGLLQNTGEND--PATRTFVKVYKSGSV 730

Query: 691 GRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFV 750
           GRSLDI+RFS+Y ELREELGQMFGI+G+ +DP RSGWQLVFVDRENDVLLLGDDPWE+FV
Sbjct: 731 GRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRENDVLLLGDDPWESFV 790

Query: 751 SNVWYIKILSPEDVQKMGEQG 771
           ++VWYIKILSPEDV KMG+QG
Sbjct: 791 NSVWYIKILSPEDVHKMGKQG 811


>gi|414584844|tpg|DAA35415.1| TPA: hypothetical protein ZEAMMB73_535909 [Zea mays]
          Length = 817

 Score =  931 bits (2405), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 516/796 (64%), Positives = 596/796 (74%), Gaps = 39/796 (4%)

Query: 6   KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 65
           KCLNSELWHACAGPLV LPTVGTRVVYFPQGHSEQVAA+TNKEVD HIPNYPNLPPQLIC
Sbjct: 24  KCLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVDGHIPNYPNLPPQLIC 83

Query: 66  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTS 125
           QLH+VTMHADVETDEVYAQMTLQPL+P+EQ D ++P E+GI SKQPTNYFCKTLTASDTS
Sbjct: 84  QLHDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQPTNYFCKTLTASDTS 143

Query: 126 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 185
           THGGFSVPRRAAE+VFP LDF+ QPPAQELIARD+HDVEWKFRHIFRGQPKRHLLTTGWS
Sbjct: 144 THGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDVEWKFRHIFRGQPKRHLLTTGWS 203

Query: 186 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 245
           VFVSAKRLVAGDSVLFIWNEKNQLLLGIR A RP TVMPSSVLSSDSMHIGLLAAAAHAA
Sbjct: 204 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRHATRPQTVMPSSVLSSDSMHIGLLAAAAHAA 263

Query: 246 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 305
           ATNS FT+F+NPRASP+EFVIPL+KY+KAVFHTR+SVGMRFRMLFETEESSVRRYMGTIT
Sbjct: 264 ATNSRFTIFYNPRASPTEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTIT 323

Query: 306 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPW 365
            +SD DPVRW +S+WRSVKVGWDESTAGER PRVSLWEIEPLTTFPMYPSLFPLR+K PW
Sbjct: 324 EVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFPMYPSLFPLRVKHPW 383

Query: 366 HPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGNDHNQQ 425
           +   ++ +D+    ++ L WLRG TGE G  +LNFQS G+  W QQR+ PS L NDH+Q 
Sbjct: 384 YSGLAALHDD----SNALMWLRGVTGEGGFHSLNFQSPGIGSWGQQRLHPSLLSNDHDQY 439

Query: 426 YQAMLAAGMQSGDP-VRQQFMQLQQPFQYLQQSGSQNP--------------LQLKQQQH 470
              + AA        ++QQF+ LQQP Q  Q+  + NP              +     Q+
Sbjct: 440 QAVVAAAAASQSGGYLKQQFLHLQQPMQSPQEQCNLNPLLQQQILQQASQQQMVSSDAQN 499

Query: 471 LLQQLNSQAEDRAQQQQQPQQHMYHDALQ-IRTDELLQRQQSN-LPSPSF------SKAN 522
           +   LN  A  +   Q Q  QH ++D  Q I+ D+  Q   S  LPSP+        K  
Sbjct: 500 IQSVLNPGAIQQQLHQLQQMQHTHNDQKQKIQPDQQYQVASSAVLPSPTSLPSHLREKFG 559

Query: 523 FMD--SSTEISVSISPMQNMLGS----LPEGSGNLLNFSGAGPSMLRQQFPQQSLGSKYE 576
           F D   ++   +S S  +NML S    +   S +L  F+    S  +Q   QQ+   K+ 
Sbjct: 560 FSDPNVNSSSFISSSSNENMLESNFLQVSSKSVDLSRFNQPVVSEQQQPQQQQAWKQKFM 619

Query: 577 PSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFTTS 636
            SQ   F  S+SL +S   KD +V  +    D QN  +F   +DSS LL    V + T++
Sbjct: 620 GSQSMSFGGSVSL-NSPTSKDGSVDNK-VGRDVQNQSLFSPQVDSSSLLY-NMVPNLTSN 676

Query: 637 V-DPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGSVGRSLD 695
           V D  +S+ P G +   + MYGC+ DSS LL N G+ D    TRTFVKVYKSGSVGRSLD
Sbjct: 677 VADNNISAFPSGSTYLQSPMYGCLDDSSGLLQNTGENDPT--TRTFVKVYKSGSVGRSLD 734

Query: 696 ISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWY 755
           I+RFS+Y ELREELGQMFGI+G+ +DP RSGWQLVFVDRENDVLLLGDDPWE+FV++VWY
Sbjct: 735 ITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRENDVLLLGDDPWESFVNSVWY 794

Query: 756 IKILSPEDVQKMGEQG 771
           IKILSPEDV KMG+ G
Sbjct: 795 IKILSPEDVHKMGKPG 810


>gi|19352049|dbj|BAB85918.1| auxin response factor 8 [Oryza sativa]
          Length = 795

 Score =  930 bits (2404), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 510/803 (63%), Positives = 596/803 (74%), Gaps = 50/803 (6%)

Query: 4   DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQL 63
           + KCLNSELWHACAGPLV LPTVGTRVVYFPQGHSEQVAA+TNKEV+ HIPNYPNLP QL
Sbjct: 1   EKKCLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQL 60

Query: 64  ICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASD 123
           ICQLH+VTMHADVETDEVYAQMTLQPL+P+EQ D ++P E+GI SKQPTNYFCKTLTASD
Sbjct: 61  ICQLHDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQPTNYFCKTLTASD 120

Query: 124 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 183
           TSTHGGFSVPRRAAE+VFP LDF+ QPPAQELIARD+HD+EWKFRHIFRGQPKRHLLTTG
Sbjct: 121 TSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLLTTG 180

Query: 184 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAH 243
           WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAAAH
Sbjct: 181 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAH 240

Query: 244 AAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGT 303
           AAATNS FT+F+NPRASPSEFVIPL+KY+KAVFHTR+SVGMRFRMLFETEESSVRRYMGT
Sbjct: 241 AAATNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGT 300

Query: 304 ITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKR 363
           IT +SD DPVRW +S+WRSVKVGWDESTAGER PRVSLWEIEPLTTFPMYPSLFPLR+K 
Sbjct: 301 ITEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFPMYPSLFPLRVKH 360

Query: 364 PWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGNDHN 423
           PW+   +S +D+    ++ L WLRG  GE G  +LNFQS G+  W QQR+ PS L +DH+
Sbjct: 361 PWYSGVASLHDD----SNALMWLRGVAGEGGFQSLNFQSPGIGSWGQQRLHPSLLSSDHD 416

Query: 424 QQYQAMLAAGMQSGDP-VRQQFMQLQQPFQYLQQSGSQNPLQLK--------------QQ 468
           Q    + AA        ++QQF+ LQQP Q  Q+  + NPL  +                
Sbjct: 417 QYQAVVAAAAASQSGGYLKQQFLHLQQPMQSPQEHCNLNPLLQQQILQQASQQQIINPDA 476

Query: 469 QHLLQQLNSQA--------------EDRAQQQQQPQQHMYHDALQIRTDELLQRQQSNLP 514
           Q++   L+  A              ++  +Q+ QP Q     + Q+ T  +L    S LP
Sbjct: 477 QNIQTMLSPSAIQQQLQQLQQMQQVQNDQKQKIQPDQ-----SYQVPTSAVLPSPTS-LP 530

Query: 515 SPSFSKANFMD--SSTEISVSISPMQNML-GSLPEGSGNLLNFSGAGPSMLRQQFPQQSL 571
           S    K  F D  +++   ++ S   NML  S  +GS   ++ S     +  +Q  QQ  
Sbjct: 531 SHLREKFGFSDPNANSSSFITSSSSDNMLDSSFLQGSSKAVDLSRFNQPVASEQQQQQQQ 590

Query: 572 G--SKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTT 629
               K+  SQ   F  S+ L +S   KD +V  +    D QN  +F   +DSS LL    
Sbjct: 591 AWKQKFMGSQSVSFGGSV-LHNSPTSKDGSVENK-IGRDVQNQSLFSPQVDSSSLLY-NM 647

Query: 630 VSSFTTSVDPG-VSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSG 688
           V + T++V  G +S++P G +   N+MYGC+ DSS LL N G+ D    TRTFVKVYKSG
Sbjct: 648 VPNLTSNVSDGNLSTIPSGSTYLQNAMYGCLDDSSGLLQNTGEND--PATRTFVKVYKSG 705

Query: 689 SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEA 748
           SVGRSLDI+RFS+Y ELREELGQMFGI+G+ +DP RSGWQLVFVDRENDVLLLGDDPWE+
Sbjct: 706 SVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRENDVLLLGDDPWES 765

Query: 749 FVSNVWYIKILSPEDVQKMGEQG 771
           FV++VWYIKILSPEDV KMG+QG
Sbjct: 766 FVNSVWYIKILSPEDVHKMGKQG 788


>gi|295844280|gb|ADG43137.1| auxin response factor 3 [Zea mays]
          Length = 816

 Score =  924 bits (2389), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 515/796 (64%), Positives = 595/796 (74%), Gaps = 40/796 (5%)

Query: 6   KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 65
           KCLNSELWHACAGPLV LPTVGTRVVYFPQGHSEQVAA+TNKEVD HIPNYPNLPPQLIC
Sbjct: 24  KCLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVDGHIPNYPNLPPQLIC 83

Query: 66  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTS 125
           QLH+VTMHADVETDEVYAQMTLQPL+P+EQ D ++P E+GI SKQPTNYFCKTLTASDTS
Sbjct: 84  QLHDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQPTNYFCKTLTASDTS 143

Query: 126 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 185
           THGGFSVPRRAAE+VFP LDF+ QPPAQELIARD+HDVEWKFRHIFRG PKRHLLTTGWS
Sbjct: 144 THGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDVEWKFRHIFRG-PKRHLLTTGWS 202

Query: 186 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 245
           VFVSAKRLVAGDSVLFIWNEKNQLLLGIR A RP TVMPSSVLSSDSMHIGLLAAAAHAA
Sbjct: 203 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRHATRPQTVMPSSVLSSDSMHIGLLAAAAHAA 262

Query: 246 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 305
           ATNS FT+F+NPRASP+EFVIPL+KY+KAVFHTR+SVGMRFRMLFETEESSVRRYMGTIT
Sbjct: 263 ATNSRFTIFYNPRASPTEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTIT 322

Query: 306 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPW 365
            +SD DPVRW +S+WRSVKVGWDESTAGER PRVSLWEIEPLTTFPMYPSLFPLR+K PW
Sbjct: 323 EVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFPMYPSLFPLRVKHPW 382

Query: 366 HPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGNDHNQQ 425
           +   ++ +D+    ++ L WLRG TGE G  +LNFQS G+  W QQR+ PS L NDH+Q 
Sbjct: 383 YSGLAALHDD----SNALMWLRGVTGEGGFHSLNFQSPGIGSWGQQRLHPSLLSNDHDQY 438

Query: 426 YQAMLAAGMQSGDP-VRQQFMQLQQPFQYLQQSGSQNP--------------LQLKQQQH 470
              + AA        ++QQF+ LQQP Q  Q+  + NP              +     Q+
Sbjct: 439 QAVVAAAAASQSGGYLKQQFLHLQQPMQSPQEQCNLNPLLQQQILQQASQQQMVSSDAQN 498

Query: 471 LLQQLNSQAEDRAQQQQQPQQHMYHDALQ-IRTDELLQRQQSN-LPSPSF------SKAN 522
           +   LN  A  +   Q Q  QH ++D  Q I+ D+  Q   S  LPSP+        K  
Sbjct: 499 IQSVLNPGAIQQQLHQLQQMQHTHNDQKQKIQPDQQYQVASSAVLPSPTSLPSHLREKFG 558

Query: 523 FMD--SSTEISVSISPMQNMLGS----LPEGSGNLLNFSGAGPSMLRQQFPQQSLGSKYE 576
           F D   ++   +S S  +NML S    +   S +L  F+    S  +Q   QQ+   K+ 
Sbjct: 559 FSDPNVNSSSFISSSSNENMLESNFLQVSSKSVDLSRFNQPVVSEQQQPQQQQAWKQKFM 618

Query: 577 PSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFTTS 636
            SQ   F  S+SL +S   KD +V  +    D QN  +F   +DSS LL    V + T++
Sbjct: 619 GSQSMSFGGSVSL-NSPTSKDGSVDNK-VGRDVQNQSLFSPQVDSSSLLY-NMVPNLTSN 675

Query: 637 V-DPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGSVGRSLD 695
           V D  +S+ P G +   + MYGC+ DSS LL N G+ D    TRTFVKVYKSGSVGRSLD
Sbjct: 676 VADNNISAFPSGSTYLQSPMYGCLDDSSGLLQNTGENDPT--TRTFVKVYKSGSVGRSLD 733

Query: 696 ISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWY 755
           I+RFS+Y ELREELGQMFGI+G+ +DP RSGWQLVFVDRENDVLLLGDDPWE+FV++VWY
Sbjct: 734 ITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRENDVLLLGDDPWESFVNSVWY 793

Query: 756 IKILSPEDVQKMGEQG 771
           IKILSPEDV KMG+ G
Sbjct: 794 IKILSPEDVHKMGKPG 809


>gi|218195802|gb|EEC78229.1| hypothetical protein OsI_17874 [Oryza sativa Indica Group]
          Length = 833

 Score =  924 bits (2388), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 510/816 (62%), Positives = 596/816 (73%), Gaps = 65/816 (7%)

Query: 6   KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 65
           KCLNSELWHACAGPLV LPTVGTRVVYFPQGHSEQVAA+TNKEV+ HIPNYPNLP QLIC
Sbjct: 26  KCLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLIC 85

Query: 66  QLHNVTMHADVETDEVYAQMTLQPLSP-----------------EEQKDTFVPIELGIPS 108
           QLH+VTMHADVETDEVYAQMTLQPL+P                 +EQ D ++P E+GI S
Sbjct: 86  QLHDVTMHADVETDEVYAQMTLQPLNPVRRLGFLHDVCSAEVLMQEQNDAYLPAEMGIMS 145

Query: 109 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFR 168
           KQPTNYFCKTLTASDTSTHGGFSVPRRAAE+VFP LDF+ QPPAQELIARD+HD+EWKFR
Sbjct: 146 KQPTNYFCKTLTASDTSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFR 205

Query: 169 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVL 228
           HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSVL
Sbjct: 206 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVL 265

Query: 229 SSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM 288
           SSDSMHIGLLAAAAHAAATNS FT+F+NPRASPSEFVIPL+KY+KAVFHTR+SVGMRFRM
Sbjct: 266 SSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRM 325

Query: 289 LFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 348
           LFETEESSVRRYMGTIT +SD DPVRW +S+WRSVKVGWDESTAGER PRVSLWEIEPLT
Sbjct: 326 LFETEESSVRRYMGTITEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLT 385

Query: 349 TFPMYPSLFPLRLKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPW 408
           TFPMYPSLFPLR+K PW+   +S +D+    ++ L WLRG  GE G  +LNFQS G+  W
Sbjct: 386 TFPMYPSLFPLRVKHPWYSGVASLHDD----SNALMWLRGVAGEGGFQSLNFQSPGIGSW 441

Query: 409 MQQRVEPSFLGNDHNQQYQAMLAAGMQSGDP-VRQQFMQLQQPFQYLQQSGSQNPLQLK- 466
            QQR+ PS L +DH+Q    + AA        ++QQF+ LQQP Q  Q+  + NPL  + 
Sbjct: 442 GQQRLHPSLLSSDHDQYQAVVAAAAASQSGGYLKQQFLHLQQPMQSPQEHCNLNPLLQQQ 501

Query: 467 -------------QQQHLLQQLNSQA--------------EDRAQQQQQPQQHMYHDALQ 499
                          Q++   L+  A              ++  +Q+ QP Q     + Q
Sbjct: 502 ILQQASQQQIINPDAQNIQTMLSPSAIQQQLQQLQQMQQVQNDQKQKIQPDQ-----SYQ 556

Query: 500 IRTDELLQRQQSNLPSPSFSKANFMD--SSTEISVSISPMQNML-GSLPEGSGNLLNFSG 556
           + T  +L    S LPS    K  F D  +++   ++ S   NML  S  +GS   ++ S 
Sbjct: 557 VPTSAVLPSPTS-LPSHLREKFGFSDPNANSSSFITSSSSDNMLDSSFLQGSSKAVDLSR 615

Query: 557 AGPSMLRQQFPQQSLGSKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFG 616
               +  +Q  QQ+   K+  SQ   F  S+ L +S   KD +V  +    D QN  +F 
Sbjct: 616 FNQPVASEQQQQQAWKQKFMGSQSVSFGGSV-LHNSPTSKDGSVENK-IGRDVQNQSLFS 673

Query: 617 VHIDSSGLLLPTTVSSFTTSVDPG-VSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQL 675
             +DSS LL    V + T++V  G +S++P G +   N+MYGC+ DSS LL N G+ D  
Sbjct: 674 PQVDSSSLLY-NMVPNLTSNVSDGNLSTIPSGSTYLQNAMYGCLDDSSGLLQNTGEND-- 730

Query: 676 TPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRE 735
             TRTFVKVYKSGSVGRSLDI+RFS+Y ELREELGQMFGI+G+ +DP RSGWQLVFVDRE
Sbjct: 731 PATRTFVKVYKSGSVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRE 790

Query: 736 NDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 771
           NDVLLLGDDPWE+FV++VWYIKILSPEDV KMG+QG
Sbjct: 791 NDVLLLGDDPWESFVNSVWYIKILSPEDVHKMGKQG 826


>gi|302143499|emb|CBI22060.3| unnamed protein product [Vitis vinifera]
          Length = 836

 Score =  909 bits (2348), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 503/809 (62%), Positives = 590/809 (72%), Gaps = 57/809 (7%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ KCLNSELWHACAGPLVSLP VG+RVVYFPQGHSEQVAA+TNKEVD+HIPNYP+L PQ
Sbjct: 15  GEKKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLAPQ 74

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDT-FVPIELGIPSKQPTNYFCKTLTA 121
           LICQLHNVTMHADVETDEVYAQMTLQPLSP+EQK+   +P ELG PSKQPTNYFCKTLTA
Sbjct: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPQEQKEVCLLPAELGSPSKQPTNYFCKTLTA 134

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAEKVFP LD++ QPPAQELIARDLH  EWKFRHIFRGQPKRHLLT
Sbjct: 135 SDTSTHGGFSVPRRAAEKVFPPLDYTQQPPAQELIARDLHGNEWKFRHIFRGQPKRHLLT 194

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWSVFVSAKRL+AGDSVLFIWNEKNQLLLGIRRA RP T+MPSSVLSSDSMHIGLLAAA
Sbjct: 195 TGWSVFVSAKRLIAGDSVLFIWNEKNQLLLGIRRANRPQTIMPSSVLSSDSMHIGLLAAA 254

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           AHAAATNS FT+F+NPRASPSEFVIPL KY KAV+HTRVSVGMRFRMLFETEESSVRRYM
Sbjct: 255 AHAAATNSRFTIFYNPRASPSEFVIPLAKYAKAVYHTRVSVGMRFRMLFETEESSVRRYM 314

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRL 361
           GTITGISDLDPVRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS FPLRL
Sbjct: 315 GTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRL 374

Query: 362 KRPWHPSTSSFNDNRD---ETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFL 418
           KRPW  +  SF+ ++D      S L WLRG  G+QG+ +LNFQ  G+ PWMQ R++ S L
Sbjct: 375 KRPWPSALPSFHAHKDGDMSINSPLMWLRGDIGDQGIQSLNFQGYGLTPWMQPRLDASML 434

Query: 419 GNDHNQQYQAMLAAGMQ---SGDPVR---QQFMQLQQPFQ--------YLQQSGSQNPLQ 464
           G   N Q QA+ AA +Q   + DP +   Q  +Q QQP          +  Q    N  +
Sbjct: 435 GLQSNMQ-QAIAAASLQELRALDPSKHPAQSLLQFQQPQNVSNSPASVFRGQIFCNNSCR 493

Query: 465 LKQQQHLLQQLNSQAEDRAQQQQQPQQHMYHDALQIRTDELLQRQQSNLPSPSFSKANFM 524
           L  QQH+ + +++ ++  +  Q  P       +LQ             +PSP   +  F 
Sbjct: 494 LSDQQHIPKVISALSQLSSPTQSLP------PSLQ------------TIPSP-IQQQIFP 534

Query: 525 DS-STEISVS-ISPMQNMLGSLP-EGSGNLLNFSGAGPSMLRQQ-FPQQSLGSKYEPSQV 580
           DS    I+ S +S MQ++LGS   +G+ +LLN  G+ P +     FP+Q       PS  
Sbjct: 535 DSVGNPITTSDVSTMQSLLGSFSQDGTSHLLNLHGSNPVISSSAFFPKQVAVEPPLPSGT 594

Query: 581 RDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFTTSVDPG 640
              V    LP     ++ A    N +  S     F    ++  + +P +  +F  +  PG
Sbjct: 595 TQCV----LPQV---EELATPPSNASELSTLLPPFPGRDENDSVSMPFSTPNFANA--PG 645

Query: 641 VSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLT-PTRTFVKVYKSGSVGRSLDISRF 699
            +  PL      +S   C+ D S  L +   ++Q+  PTRTFVKV+K GS GRSLDI++F
Sbjct: 646 -TDFPLNSDMTTSS---CI-DESGFLQSSENLEQVNPPTRTFVKVHKLGSFGRSLDITKF 700

Query: 700 SSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKIL 759
           SSY+ELR ELG+MFG+EG+ EDPLRSGWQLVFVDRENDVLLLGDDPW+ FV+NVWYIKIL
Sbjct: 701 SSYDELRGELGRMFGLEGRLEDPLRSGWQLVFVDRENDVLLLGDDPWQEFVNNVWYIKIL 760

Query: 760 SPEDVQKMGEQGVESFSPSSGQRANSRGN 788
           SP +VQ+MG++G+   +P    R ++ GN
Sbjct: 761 SPLEVQQMGKEGINVPNPIPSHRISNSGN 789


>gi|118486652|gb|ABK95163.1| unknown [Populus trichocarpa]
          Length = 907

 Score =  902 bits (2330), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 523/896 (58%), Positives = 619/896 (69%), Gaps = 106/896 (11%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           GD KCLNSELWHACAGPLVSLP VG+RVVYFPQGHSEQVAA+TNKEVD+HIPNYP+LPPQ
Sbjct: 19  GDKKCLNSELWHACAGPLVSLPHVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLPPQ 78

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFV-PIELGIPSKQPTNYFCKTLTA 121
           LICQLHNVTMHADVETDEVYAQMTLQPLS ++QKD ++ P ELG  SKQPTNYFCKTLTA
Sbjct: 79  LICQLHNVTMHADVETDEVYAQMTLQPLSQDDQKDAYLLPAELGTASKQPTNYFCKTLTA 138

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAEKVFP+LD+S  PPAQELIARDLHD EWKFRHIFRGQPKRHLLT
Sbjct: 139 SDTSTHGGFSVPRRAAEKVFPTLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHLLT 198

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP T MPSSVLSSDSMHIGLLAAA
Sbjct: 199 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTFMPSSVLSSDSMHIGLLAAA 258

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           AHAAATNS FT+F+NPRASPSEFVIPL KY+KAV+HTRVSVGMRFRMLFETEESSVRRYM
Sbjct: 259 AHAAATNSRFTIFYNPRASPSEFVIPLVKYIKAVYHTRVSVGMRFRMLFETEESSVRRYM 318

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRL 361
           GTITGISDLDPVRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS FP+RL
Sbjct: 319 GTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSAFPMRL 378

Query: 362 KRPWHPSTSSFNDNRD---ETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFL 418
           KRPW     SF+  +D      S + WL+GG G+ G+ +LNFQS G+ PW+Q R + S +
Sbjct: 379 KRPWPSGLPSFHGLQDGDLNINSPMMWLQGGVGDLGVQSLNFQSFGVAPWIQPRFDTS-M 437

Query: 419 GNDHNQQYQAMLAAGMQSGDPVRQQFMQLQQPFQYLQ-QSGSQNPLQLKQQQHLLQQLNS 477
                + YQ M AA +Q    V    +  Q   Q+ Q Q+ S  P  L Q+Q +LQQ N 
Sbjct: 438 PALQPEMYQTMAAAALQEMRTVESSKLASQSHLQFQQSQNVSNGPAALIQRQ-MLQQSNL 496

Query: 478 Q-------AEDRAQQQQQ-PQQHMYH------------------DALQIRTDELLQRQQ- 510
           Q        E++A  Q Q  QQH+ H                       + +EL   QQ 
Sbjct: 497 QHALLQNFQENQASTQAQFLQQHLQHRNQYTGQQLQQHQPQLQQVQQPKQLNELSAPQQI 556

Query: 511 ----SNLP---------SPSFS--------KANFMDSSTEISVS-ISPMQNMLGSLP-EG 547
               S LP         SPS          +A        I+ S +S M +++GSL  +G
Sbjct: 557 PNVISALPHLTSVAPSQSPSLQPISSQCQQQAFSEPLGNSIAASDVSSMHSVIGSLSQDG 616

Query: 548 SGNLLNFSGAGP----SMLRQQF---PQQSLGSKY----EPSQVRDFVHSMS----LPSS 592
             +LLN +G+ P    ++L ++    PQ S G+ +    +  Q+R    ++S    L + 
Sbjct: 617 GSHLLNSNGSNPVISPALLSKRAAIDPQLSSGAAHCALPQVEQLRTTQSTVSDLATLLAP 676

Query: 593 YNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFT---TSVDPGVSSMPLGDS 649
           ++G++ +  T     D QN+++FGV+IDSS  +L   + +     T  DP   SMP   S
Sbjct: 677 FSGREYS--TYQGANDPQNNLLFGVNIDSSTFMLQHGIPNLRNIGTENDP--LSMPFAAS 732

Query: 650 GFHNSM------------YGCMQDSSELLHNVGQIDQLTP-TRTFVKVYKSGSVGRSLDI 696
            F ++               C+ D S  L +   +DQ+ P TRTFVKV+KSGS GRSLDI
Sbjct: 733 TFTSATGSDIPLNSDMTASSCV-DESGFLQSSENVDQVNPSTRTFVKVHKSGSYGRSLDI 791

Query: 697 SRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYI 756
           S+FSSY+ELR EL ++F +EG  EDP RSGWQLVF DRENDVLLLGDDPW+ FV+NVWYI
Sbjct: 792 SKFSSYDELRSELARLFCLEGLLEDPQRSGWQLVFGDRENDVLLLGDDPWQEFVNNVWYI 851

Query: 757 KILSPEDVQKMGEQGVESFSPSSGQR---ANSRGNC----------GRDPVGSLEY 799
           KILSP +VQ+MG++G+   +    Q+   +NS G+           G   +GSL+Y
Sbjct: 852 KILSPLEVQQMGKEGLSPAASVPCQKLSNSNSDGHMNTQGFRNSSNGIASMGSLDY 907


>gi|301793209|emb|CBA11995.1| putative auxin response factor 8 [Amborella trichopoda]
          Length = 838

 Score =  900 bits (2325), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 494/816 (60%), Positives = 579/816 (70%), Gaps = 73/816 (8%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ +CLNSELWHACAGPLVSLP VG+RVVY PQGHSEQVAA+TNKE+D+HIPNYP+LPPQ
Sbjct: 15  GEKRCLNSELWHACAGPLVSLPAVGSRVVYLPQGHSEQVAASTNKEIDAHIPNYPSLPPQ 74

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           LICQLH+VTMHADVETDEVYAQMTLQPL+ +EQKD +VP  LG PSKQPTNYFCKTLTAS
Sbjct: 75  LICQLHDVTMHADVETDEVYAQMTLQPLTQQEQKDAYVPTVLGFPSKQPTNYFCKTLTAS 134

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSVPRRAAEKVFP LDF+ QPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT
Sbjct: 135 DTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 194

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWSVFVSAKRLVAGDSV+FIWN+KNQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAAA
Sbjct: 195 GWSVFVSAKRLVAGDSVIFIWNDKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAA 254

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 302
           HAAATNS FT+F+NPRASPSEFVIP  K+ KAV+HTR+SVGMRFRMLFETEES VRRYMG
Sbjct: 255 HAAATNSRFTIFYNPRASPSEFVIPFAKFAKAVYHTRISVGMRFRMLFETEESGVRRYMG 314

Query: 303 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 362
           TITG  DLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLW+IEPLTTFPMYPS F LRLK
Sbjct: 315 TITGKCDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWDIEPLTTFPMYPSPFALRLK 374

Query: 363 RPWHPSTSSFNDNRDETASGLNWLRGGTGEQ--GLTTLNFQSLGM-FPWMQQRVEPSFLG 419
           RPW P   S  D++D+  + + WLRG  GE+   L + + Q+LG+  PWMQ R + S  G
Sbjct: 375 RPWQPGLPSLYDDKDDEGNPVMWLRGDNGERIPALQSPSCQNLGIGNPWMQPRPDLSLQG 434

Query: 420 NDHNQQYQAMLAAGMQ---SGDPVRQQFMQLQQPF----------------QYLQQSGS- 459
            + N  YQA+ A+ +Q   SGD V+  F+Q QQ F                Q+LQQS S 
Sbjct: 435 MESN-FYQALAASALQEIRSGDLVKAPFLQFQQQFNAQPQYQCFSNPLLQRQFLQQSNSQ 493

Query: 460 -----QNPL--QLKQQQHLLQ-QLNSQAEDRAQQQQ--QPQQHMYHDALQIRTDELLQRQ 509
                QNP   +   Q HLLQ QLN    +    +Q   P        L I     L + 
Sbjct: 494 KSVTHQNPTVNENMNQTHLLQSQLNHSFGNPIHHEQFHVPNATTALSQLAISNSCSLSQP 553

Query: 510 QSNLPSPSFSKANFMDSSTEIS---VSISPMQNMLGSL-PEGSGNLLNFSGAGPSMLRQQ 565
            ++    +F+ +N   SS + +    S+S +++++G    + +  LLN       M+   
Sbjct: 554 TTHGRPSAFADSNPSLSSFQTADSNPSLSSLRSVMGPFYSDENATLLNMEKTSQGMI--- 610

Query: 566 FPQQSLGSKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLL 625
                      P QV    H+           + V  EN  +D+Q  ++FGV+IDSS L+
Sbjct: 611 ----------HPQQVSFHTHT---------PQSMVEHENGTSDTQGPLLFGVNIDSSSLI 651

Query: 626 LPTTVSSFTT-----SVDPGVSSMPLGDSGFHNS---MYGCMQDSSELLHNVGQIDQLTP 677
           LP + S+        S D G+  +     GF  +    +GC  DS  LLHN+ Q     P
Sbjct: 652 LPNSDSTLRLRTMEGSADSGL--LQFSAQGFQAASIGAFGCPNDSG-LLHNMEQRKPHNP 708

Query: 678 TRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 737
               VK+YK+G VGR+LDIS+FSSY ELR ++  MFG+EG+ +DPLRSGWQLVFVDREND
Sbjct: 709 --ILVKIYKTGCVGRTLDISQFSSYEELRGKVADMFGLEGQLDDPLRSGWQLVFVDREND 766

Query: 738 VLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVE 773
            LLLGD PWEAFV+NVWYIKILSP D+Q MG  GV+
Sbjct: 767 ALLLGDGPWEAFVNNVWYIKILSPHDIQMMGTNGVD 802


>gi|356555494|ref|XP_003546066.1| PREDICTED: auxin response factor 6-like [Glycine max]
          Length = 897

 Score =  894 bits (2310), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 509/890 (57%), Positives = 603/890 (67%), Gaps = 100/890 (11%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ + L+SELWHACAGPLVSLP VG+RVVYFPQGHSEQVA +TNKEVD+HIPNYP+LPPQ
Sbjct: 15  GEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNKEVDAHIPNYPSLPPQ 74

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           LICQLHN+TMHADVETDEVYAQMTLQPL+P+EQ + ++P ELG  SKQPTNYFCKTLTAS
Sbjct: 75  LICQLHNMTMHADVETDEVYAQMTLQPLNPQEQNEAYLPAELGTASKQPTNYFCKTLTAS 134

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSVPRRAAEKVFP LDFS QPPAQELIARDLH  EWKFRHIFRGQPKRHLLTT
Sbjct: 135 DTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHGNEWKFRHIFRGQPKRHLLTT 194

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSVLSSDSMH+GLLAAAA
Sbjct: 195 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAA 254

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 302
           HAAATNS FT+F+NPRASPSEFVIPL KYVKAV+HTRVSVGMRFRMLFETEESSVRRYMG
Sbjct: 255 HAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMG 314

Query: 303 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 362
           TITGI DLDPVRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS FPLRLK
Sbjct: 315 TITGIGDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSSFPLRLK 374

Query: 363 RPWHPSTSSFNDNRDETASGLN----WLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFL 418
           RPW P   SF+  +D+   GLN    WLR    ++GL +LNFQ +G+ PWMQ R +P+ L
Sbjct: 375 RPWPPGLPSFHGMKDDDF-GLNSPLLWLR--DTDRGLQSLNFQGIGVNPWMQPRFDPTVL 431

Query: 419 G--NDHNQQYQAMLAAGMQSGDPVRQ---QFMQLQQPFQYLQQSGSQNPLQLKQQQHLLQ 473
               D  Q   A     M+S DP +Q     +Q QQP  +  ++ +    Q+ Q+    Q
Sbjct: 432 NMQTDMYQAAAAAAVQDMRSLDPSKQLSASLLQFQQPQNFPNRTAALMQAQMLQKSQPQQ 491

Query: 474 QLNSQAEDRAQQQQQPQQHMYH---------------------------DALQIRTDELL 506
              +  E++   Q QPQ   +                            D  QI +    
Sbjct: 492 IFGNNQENQHSPQSQPQTQAHLQQHLQHQHSFNSQHHHHQQQQQQQQVVDNQQISSAVST 551

Query: 507 QRQQSNLPSP--------SFSKANFMDSS-TEISVSISPMQNMLGSLPEG-SGNLLNF-- 554
             Q  + P P        S    NF +S+   ++  +SP+ ++LGS P+  + +LLN   
Sbjct: 552 MSQLFSAPQPQSPPMQAISSLCQNFSNSNGNSVTTIVSPLHSILGSFPQDETSHLLNLPR 611

Query: 555 ---------SGAGPSMLRQQFPQQSLGSKY----------EPSQVRDFVHSMSLPSSYNG 595
                    S   PS      P  S G+ +          +P      +++++LP  + G
Sbjct: 612 TSSWIPIQNSSGWPSKRVAVDPLLSSGASHCVLPQVDQLGQPHSTMS-LNAITLP-PFPG 669

Query: 596 KDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFT-TSVDPGVSSMPLGDSGFHNS 654
           +++++  E  N D QN ++FGV+ID S LL+P  +SS    S +   S++P   S + N+
Sbjct: 670 RESSIDQEGSN-DPQNHLLFGVNIDPSSLLMPNGMSSLKGVSGNNNSSTLPYQSSNYLNT 728

Query: 655 MYGCMQD----------SSELLHNVGQIDQLTP-TRTFVKVYKSGSVGRSLDISRFSSYN 703
             G               S  LH      Q  P  +TFVKVYKSGS GRSLDI++FSSY+
Sbjct: 729 TTGTDSSLNHGMTPNIGDSGFLHCPEDAGQGNPLNKTFVKVYKSGSFGRSLDITKFSSYH 788

Query: 704 ELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPED 763
           ELR EL +MFG+EG+ EDP+RSGWQLVFVDRENDVLLLGD PW  FV++VW IKILSP++
Sbjct: 789 ELRGELARMFGLEGELEDPVRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPQE 848

Query: 764 VQKMGEQGVESFSPSSGQRANSRGNCG-----RDP---------VGSLEY 799
           VQ+MG  G+E  +    QR  S G C      +DP         VGSL+Y
Sbjct: 849 VQQMGNNGLELLNSVPNQRL-SNGICDDYVSRQDPRNLSTGITTVGSLDY 897


>gi|414584845|tpg|DAA35416.1| TPA: hypothetical protein ZEAMMB73_535909 [Zea mays]
          Length = 786

 Score =  892 bits (2305), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 498/772 (64%), Positives = 574/772 (74%), Gaps = 39/772 (5%)

Query: 6   KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 65
           KCLNSELWHACAGPLV LPTVGTRVVYFPQGHSEQVAA+TNKEVD HIPNYPNLPPQLIC
Sbjct: 24  KCLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVDGHIPNYPNLPPQLIC 83

Query: 66  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTS 125
           QLH+VTMHADVETDEVYAQMTLQPL+P+EQ D ++P E+GI SKQPTNYFCKTLTASDTS
Sbjct: 84  QLHDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQPTNYFCKTLTASDTS 143

Query: 126 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 185
           THGGFSVPRRAAE+VFP LDF+ QPPAQELIARD+HDVEWKFRHIFRGQPKRHLLTTGWS
Sbjct: 144 THGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDVEWKFRHIFRGQPKRHLLTTGWS 203

Query: 186 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 245
           VFVSAKRLVAGDSVLFIWNEKNQLLLGIR A RP TVMPSSVLSSDSMHIGLLAAAAHAA
Sbjct: 204 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRHATRPQTVMPSSVLSSDSMHIGLLAAAAHAA 263

Query: 246 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 305
           ATNS FT+F+NPRASP+EFVIPL+KY+KAVFHTR+SVGMRFRMLFETEESSVRRYMGTIT
Sbjct: 264 ATNSRFTIFYNPRASPTEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTIT 323

Query: 306 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPW 365
            +SD DPVRW +S+WRSVKVGWDESTAGER PRVSLWEIEPLTTFPMYPSLFPLR+K PW
Sbjct: 324 EVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFPMYPSLFPLRVKHPW 383

Query: 366 HPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGNDHNQQ 425
           +   ++ +D+    ++ L WLRG TGE G  +LNFQS G+  W QQR+ PS L NDH+Q 
Sbjct: 384 YSGLAALHDD----SNALMWLRGVTGEGGFHSLNFQSPGIGSWGQQRLHPSLLSNDHDQY 439

Query: 426 YQAMLAAGMQSGDP-VRQQFMQLQQPFQYLQQSGSQNP--------------LQLKQQQH 470
              + AA        ++QQF+ LQQP Q  Q+  + NP              +     Q+
Sbjct: 440 QAVVAAAAASQSGGYLKQQFLHLQQPMQSPQEQCNLNPLLQQQILQQASQQQMVSSDAQN 499

Query: 471 LLQQLNSQAEDRAQQQQQPQQHMYHDALQ-IRTDELLQRQQSN-LPSPSF------SKAN 522
           +   LN  A  +   Q Q  QH ++D  Q I+ D+  Q   S  LPSP+        K  
Sbjct: 500 IQSVLNPGAIQQQLHQLQQMQHTHNDQKQKIQPDQQYQVASSAVLPSPTSLPSHLREKFG 559

Query: 523 FMD--SSTEISVSISPMQNMLGS----LPEGSGNLLNFSGAGPSMLRQQFPQQSLGSKYE 576
           F D   ++   +S S  +NML S    +   S +L  F+    S  +Q   QQ+   K+ 
Sbjct: 560 FSDPNVNSSSFISSSSNENMLESNFLQVSSKSVDLSRFNQPVVSEQQQPQQQQAWKQKFM 619

Query: 577 PSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFTTS 636
            SQ   F  S+SL +S   KD +V  +    D QN  +F   +DSS LL    V + T++
Sbjct: 620 GSQSMSFGGSVSL-NSPTSKDGSVDNK-VGRDVQNQSLFSPQVDSSSLLY-NMVPNLTSN 676

Query: 637 V-DPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGSVGRSLD 695
           V D  +S+ P G +   + MYGC+ DSS LL N G+ D    TRTFVKVYKSGSVGRSLD
Sbjct: 677 VADNNISAFPSGSTYLQSPMYGCLDDSSGLLQNTGENDPT--TRTFVKVYKSGSVGRSLD 734

Query: 696 ISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWE 747
           I+RFS+Y ELREELGQMFGI+G+ +DP RSGWQLVFVDRENDVLLLGDDPWE
Sbjct: 735 ITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRENDVLLLGDDPWE 786


>gi|302398563|gb|ADL36576.1| ARF domain class transcription factor [Malus x domestica]
          Length = 895

 Score =  892 bits (2304), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 518/898 (57%), Positives = 607/898 (67%), Gaps = 118/898 (13%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ K LNSELWHACAGPLVSLP VGTRVVYFPQGHSEQVAA+TNKEVD+HIPN+P+LPPQ
Sbjct: 15  GEKKVLNSELWHACAGPLVSLPAVGTRVVYFPQGHSEQVAASTNKEVDAHIPNHPSLPPQ 74

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           LICQLHNVTMHADVETDEVYAQMTLQPL+P+EQKD ++P  LG P+KQPTNYFCKTLTAS
Sbjct: 75  LICQLHNVTMHADVETDEVYAQMTLQPLNPQEQKDGYLPAGLGSPNKQPTNYFCKTLTAS 134

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSVPRRAAEKVFP LDF+ QPPAQELIARDLHD EWKFRHIFRGQPKRHLLTT
Sbjct: 135 DTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTT 194

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA R  TVMPSSVLSSDSMH+GLLAAAA
Sbjct: 195 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRQQTVMPSSVLSSDSMHLGLLAAAA 254

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 302
           HAAATNS FT+F+NPRASPSEFVIPL KY+KAV+HT +SVGMRFRMLFETEESSVRRYMG
Sbjct: 255 HAAATNSRFTIFYNPRASPSEFVIPLAKYIKAVYHTCISVGMRFRMLFETEESSVRRYMG 314

Query: 303 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 362
           TITGISDLDP RW NSHWRSVKVGWDESTAGERQPRVSLWE+EPLTTFPMYPS F LRLK
Sbjct: 315 TITGISDLDPARWPNSHWRSVKVGWDESTAGERQPRVSLWEVEPLTTFPMYPSPFQLRLK 374

Query: 363 RPWHPSTSSFNDNRDE---TASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLG 419
           RPW P   SFN  RD+     S L WL+G  G++G+ +LNF  +G+ PWMQ R++ S +G
Sbjct: 375 RPWTPGLPSFNGMRDDDLGMNSQLVWLQGNNGDRGMQSLNFPGMGVTPWMQPRLDASMIG 434

Query: 420 NDHNQQYQAMLAAGMQ---SGDPVR---QQFMQLQQPFQYLQQSGSQNPL---QLKQQQH 470
              +  YQAM AA +Q   + DP R      +Q QQP Q L  S     L   Q+ Q+ H
Sbjct: 435 L-QSDMYQAMAAAALQEMRAVDPSRPLPTSLLQFQQP-QSLPNSNRSAALMQPQMVQESH 492

Query: 471 LLQQLNSQAEDRAQQQQQPQ-----------------------------QHM-------- 493
             QQ   Q      +Q QPQ                             QH+        
Sbjct: 493 -SQQAFLQGVQENHRQSQPQAQTQSHLLQQQLQHQNSFSNQQQQQLVDHQHIPSAVSSLT 551

Query: 494 --------YHDALQIRTDELLQRQQSNLPSPSFSKANFMDSSTEISVSISPMQNMLGSLP 545
                      +LQ+ T   L  QQ      SFS +N    +   S  ISP+ N++GS P
Sbjct: 552 QFASASQSQSPSLQVVTT--LCHQQ------SFSDSN---GNPATSTVISPLHNLMGSFP 600

Query: 546 EG-SGNLLNF--------SGAGPSMLRQQFPQQSLG---------SKYEPSQVRDFVHSM 587
           +  S +LLN         S   PS      P  S G          ++ P       +S+
Sbjct: 601 QDESSHLLNLPRTNQLISSDGWPSKRAAIDPLLSSGVSQCVLPRVEQFGPPHTTMSQNSI 660

Query: 588 SLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFT-TSVDPGVSSMP- 645
           SLP  + G++ ++  E   TD Q+ ++FGV+I+SS L++ + +S+      D G ++M  
Sbjct: 661 SLP-PFPGRECSLDQEG-GTDPQSHLLFGVNIESSPLIMQSGMSNLRGVGSDCGSTTMHF 718

Query: 646 ----LGDSGFHNSM------YGCMQDSSELLHNVGQIDQLTP-TRTFVKVYKSGSVGRSL 694
               +  +G   S+        C+ +S   L +    D   P  R FVKVYKSGS GRSL
Sbjct: 719 PSNYMSTAGSDFSINPAVTPSSCIHESG-FLQSSENADNGDPLNRNFVKVYKSGSFGRSL 777

Query: 695 DISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVW 754
           DI++FSSY ELR EL +MFG+EGK +DP+RSGWQLVFVDRENDVLLLGDDPW  FV++VW
Sbjct: 778 DITKFSSYQELRNELARMFGLEGKLDDPVRSGWQLVFVDRENDVLLLGDDPWPEFVNSVW 837

Query: 755 YIKILSPEDVQKMGEQGVESFSP------------SSGQRANSRG-NCGRDPVGSLEY 799
            IKILSP++VQ+MG++G+E                  G R +SR  + G   VGSLEY
Sbjct: 838 CIKILSPQEVQQMGKRGLELLKSVPNQRLSNNSCDDYGSRQDSRNLSSGITSVGSLEY 895


>gi|356501413|ref|XP_003519519.1| PREDICTED: auxin response factor 6-like [Glycine max]
          Length = 896

 Score =  891 bits (2302), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 509/842 (60%), Positives = 584/842 (69%), Gaps = 80/842 (9%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ KCLNSELWHACAGPLVSLP VG+RVVYFPQGHSEQVAA+TN+EVD+HIPNYPNLPPQ
Sbjct: 16  GEKKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNREVDAHIPNYPNLPPQ 75

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFV-PIELGIPSKQPTNYFCKTLTA 121
           LICQLHNVTMHAD ETDEVYAQMTLQPLSP+EQK+ ++ P ELG PSKQPTNYFCKTLTA
Sbjct: 76  LICQLHNVTMHADAETDEVYAQMTLQPLSPQEQKEVYLLPAELGTPSKQPTNYFCKTLTA 135

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAEKVFP LD+S QPPAQELIARDLHD EWKFRHIFRGQPKRHLLT
Sbjct: 136 SDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLT 195

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP T+MPSSVLSSDSMHIGLLAAA
Sbjct: 196 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTIMPSSVLSSDSMHIGLLAAA 255

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           AHAAATNS FT+F+NPRASPSEF IPL KYVKAV+HTRVSVGMRFRMLFETEESSVRRYM
Sbjct: 256 AHAAATNSRFTIFYNPRASPSEFAIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYM 315

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRL 361
           GTITGISDLDPVRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS FPLRL
Sbjct: 316 GTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRL 375

Query: 362 KRPWH---PSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFL 418
           KRPW    PS     D      S   WL+GG G+QG+ +LNFQ LG+ PWMQ R++PS  
Sbjct: 376 KRPWPSGLPSLYGLKDGDMGIGSPFMWLQGGLGDQGMQSLNFQGLGVTPWMQPRLDPSIP 435

Query: 419 GNDHNQQYQAMLAAGMQSGDPV-----RQQFMQLQQ----PFQYLQQSGSQNPLQLKQQQ 469
           G    + YQA+ ++  Q    +      Q  +Q QQ    P  +  +   Q   Q + Q 
Sbjct: 436 G-LQPELYQAITSSAFQEMRTMDLSKSSQSLLQFQQTSNVPSAHASEVQRQLLPQSQLQN 494

Query: 470 HLLQQLNSQAEDRAQQQQQPQQHMYH------DALQIRTDELLQRQQSNLPSPSFSKANF 523
            LL            Q  Q Q H YH         Q   +  +Q+Q  N+ SP    A+ 
Sbjct: 495 TLLHNFQENQVPAQSQLLQQQLHRYHPYSDQQQQQQQLKNLPVQQQLPNVISPMSKFASG 554

Query: 524 MDSST---------------------EISVS-ISPMQNMLGSLP-EGSGNLLNFSGAG-- 558
             S +                      IS S +SP+Q++LGS   +G+  LLN SG+   
Sbjct: 555 TQSQSPPMQALASHCQQQSFPEPMRNHISGSDVSPIQSLLGSFSQDGTSQLLNLSGSNSV 614

Query: 559 -------PSMLRQQFPQ-QSLGSKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENC----N 606
                  P  +  + PQ  S  S+    QV +   S S  S         G E+      
Sbjct: 615 MSSAAILPKQITAEPPQLPSAASQCILPQVENLGTSQSNVSELAALPPFPGREHSAYHGA 674

Query: 607 TDSQNSVVFGVHIDSSGLLLPTTVSS--------------FTTSVDPGVSS--MPLGDSG 650
            D Q++++FG++ID S L+L + +S+              F+TS   G +    PL  + 
Sbjct: 675 ADPQSNLLFGINIDPSSLMLQSGMSNLRNIGKVNDSLSLPFSTSNCGGATGTDFPLSSNM 734

Query: 651 FHNSMYGCMQDSSELLHNVGQIDQLT-PTRTFVKVYKSGSVGRSLDISRFSSYNELREEL 709
             +S   C+ D S  L     +DQ   PT TFVKV+KSGS GRSLDIS+FSSY+EL  EL
Sbjct: 735 TTSS---CV-DESGFLQCSENVDQANIPTGTFVKVHKSGSFGRSLDISKFSSYDELISEL 790

Query: 710 GQMFGIEGKFEDPL--RSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
            +MFG+EG+ EDP   RSGWQLVFVDRENDVLLLGDDPW+ FV+NVWYIKILSP +VQ+M
Sbjct: 791 ARMFGLEGQLEDPKTQRSGWQLVFVDRENDVLLLGDDPWQEFVNNVWYIKILSPLEVQQM 850

Query: 768 GE 769
           G+
Sbjct: 851 GK 852


>gi|356549132|ref|XP_003542951.1| PREDICTED: auxin response factor 6-like [Glycine max]
          Length = 895

 Score =  890 bits (2299), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 512/890 (57%), Positives = 602/890 (67%), Gaps = 102/890 (11%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+N+ L+SELWHACAGPLVSLP VG+RVVYFPQGHSEQVA +TNKEVD+HIPNYP+LPPQ
Sbjct: 15  GENRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNKEVDAHIPNYPSLPPQ 74

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           LICQLHN+TMHAD ETDEVYAQMTLQPL+P+EQK+ ++P ELG PSKQPTNYFCKTLTAS
Sbjct: 75  LICQLHNMTMHADAETDEVYAQMTLQPLNPQEQKEAYLPAELGTPSKQPTNYFCKTLTAS 134

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSVPRRAAEKVFP LDFS QPPAQELIARDLH  EWKFRHIFRGQPKRHLLTT
Sbjct: 135 DTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHGNEWKFRHIFRGQPKRHLLTT 194

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSVLSSDSMH+GLLAAAA
Sbjct: 195 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAA 254

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 302
           HAAATNS FT+F+NPRASPSEFVIPL KYVKAV+HTRVSVGMRFRMLFETEESSVRRYMG
Sbjct: 255 HAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMG 314

Query: 303 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 362
           TITGISDLDPVRW NSHWRSVKVGWDESTAG+RQPRVSLWEIEPLTTFPMYPS FPLRLK
Sbjct: 315 TITGISDLDPVRWQNSHWRSVKVGWDESTAGDRQPRVSLWEIEPLTTFPMYPSPFPLRLK 374

Query: 363 RPWHPSTSSFNDNRDET---ASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLG 419
           RPW P   SF+  +D+     S L WLR    ++GL +LNFQ +G+ PWMQ R +P+ L 
Sbjct: 375 RPWPPGLPSFHGMKDDDFGPNSPLLWLR--DPDRGLPSLNFQGIGINPWMQPRFDPTML- 431

Query: 420 NDHNQQYQAMLAAGMQSGDPVRQQFMQLQQPFQYLQQSGSQNPLQLKQQQHLLQQLNSQA 479
           N     YQA     M+S DP +Q    L  PFQ  Q   ++    ++ Q     Q     
Sbjct: 432 NMQTDMYQAAAVQDMRSLDPSKQHSASL-LPFQQPQNFPNRTAALMQAQMLQQSQPQQIF 490

Query: 480 EDRAQQQQQPQQHMYH------------------------------DALQIRTDELLQRQ 509
            +  + Q  PQ   +                               D  QI +      Q
Sbjct: 491 GNTQENQHSPQSQAHLQQHLQHQHSFNSQHHHHHQQQQQRQQHQVVDNQQISSAVSTMSQ 550

Query: 510 QSNLPSPS----------FSKANFMDSS-TEISVSISPMQNMLGSLPEG-SGNLLNF--- 554
             + P P             + NF DS+   ++  +SP+ ++LGS P+  + +LLN    
Sbjct: 551 FVSAPQPQSPPMQVISSMCQQQNFSDSNGNTVTTIVSPLHSILGSFPQDETSHLLNLPRT 610

Query: 555 --------SGAGPSMLRQQFPQQSLG-SKYEPSQVRDF--------VHSMSLPSSYNGKD 597
                   S   PS      P  S G S+    QV            +++SLP  + G++
Sbjct: 611 SSWIPVQNSSGWPSKRVAVDPLLSSGASQCVLPQVEQLGQPQSTMSQNAISLP-PFPGRE 669

Query: 598 AAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFTTSV-DPGVSSMPL---------- 646
            ++  E  N D QN ++FGV+I+ S LL+P  +SS      + G S++P           
Sbjct: 670 CSIDQEGSN-DPQNHLLFGVNIEPSSLLMPNGMSSLKGVCGNNGSSTLPYQSSNYLNTTT 728

Query: 647 -GDSGFHNSMYGCMQDSS--ELLHNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYN 703
             DS  ++ M   + DS   + L   GQ + L   +TFVKVYKSGS GRSLDI++FSSY+
Sbjct: 729 RTDSSLNHGMTPNIGDSGFLQCLEEAGQGNPL--NKTFVKVYKSGSFGRSLDITKFSSYH 786

Query: 704 ELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPED 763
           ELR EL +MFG+EG+ EDP+RSGWQLVFVDRENDVLLLGD PW  FV++VW IKILSP++
Sbjct: 787 ELRGELARMFGLEGELEDPVRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPQE 846

Query: 764 VQKMGEQGVESFSPSSGQRANSRGNCG-----RDP---------VGSLEY 799
           VQ+MG  G+E  +    QR  S G C      +DP         VGSL+Y
Sbjct: 847 VQQMGNNGLELLNSFPIQRL-SNGICDDYVSRQDPRNLGTGITTVGSLDY 895


>gi|224114483|ref|XP_002316773.1| predicted protein [Populus trichocarpa]
 gi|222859838|gb|EEE97385.1| predicted protein [Populus trichocarpa]
          Length = 914

 Score =  889 bits (2296), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 500/879 (56%), Positives = 600/879 (68%), Gaps = 98/879 (11%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ + LNSELWHACAGPLVSLP VG+RVVYF QGHSEQVAA+TNKEVD+ IPNYP+LPPQ
Sbjct: 15  GEKRVLNSELWHACAGPLVSLPAVGSRVVYFAQGHSEQVAASTNKEVDARIPNYPSLPPQ 74

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           LICQLHNVTMHADVETDEVYAQ+TLQPLSP+EQKD ++P +LG PSKQPTNYFCKTLTAS
Sbjct: 75  LICQLHNVTMHADVETDEVYAQLTLQPLSPQEQKDAYLPADLGTPSKQPTNYFCKTLTAS 134

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSVPRRAAEKVFP LDFS QPPAQELIARDLHD EWKFRHIFRGQPKRHLLTT
Sbjct: 135 DTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTT 194

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWSVFVSAKRL+AGDSVLFIWNEKNQLLLGI+RA RP TVMPSSVLSSDSMH+GLLAAAA
Sbjct: 195 GWSVFVSAKRLIAGDSVLFIWNEKNQLLLGIKRATRPQTVMPSSVLSSDSMHLGLLAAAA 254

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 302
           HAAATNS FT+F+NPRASPSEF+IPL KY+KAV++TRVSVGMRFRMLFETEESSVRRYMG
Sbjct: 255 HAAATNSRFTIFYNPRASPSEFIIPLAKYLKAVYYTRVSVGMRFRMLFETEESSVRRYMG 314

Query: 303 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 362
           TITGISDLD  RW NS WRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS FPLRLK
Sbjct: 315 TITGISDLDVARWPNSLWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSTFPLRLK 374

Query: 363 RPWHPSTSSFN----------------DNRDETASGLNWLRGGTGEQGLTTLNFQSLGMF 406
           RPW P   SF+                D+     S L WLRG  G++G+ +LN Q +G+ 
Sbjct: 375 RPWTPGLHSFHGKLLYTILRALMDGIKDDDLGMNSSLMWLRGD-GDRGIQSLNLQGMGVA 433

Query: 407 PWMQQRVEPSFLGNDHNQQYQAMLAAG---MQSGDPVRQQFMQLQQPFQY----LQQSGS 459
           PWMQ RV+ S LG   N  YQ M  A    M++ DP +     L Q  Q+    ++ +  
Sbjct: 434 PWMQPRVDTSMLGL-QNDVYQTMATAAFQEMRALDPSKSSAASLLQFQQHQNLPIRNAAL 492

Query: 460 QNPLQLKQ---QQHLLQQLNSQAEDRAQQQQQP-QQHMYH--------DALQIRTDELLQ 507
             PL L+Q   QQ  LQ +         Q Q P + H+ H        D+ + +   L Q
Sbjct: 493 MQPLMLQQSPSQQAFLQGVQENKHQSQPQSQTPTRSHLIHQLQHQHSLDSPEQQQPLLQQ 552

Query: 508 RQQSNLPSPSFSKA------------------------NFMDSSTEISVS--ISPMQNML 541
           +  ++   P+   A                        +F DS+  +  S  +SP+Q++L
Sbjct: 553 QHLADQQIPNVVSAISQYASATQSLTPPLQAISLCQQHSFSDSNGNLVTSPVVSPLQSLL 612

Query: 542 GSLPEG-SGNLLNFSGAGPSMLRQQFPQQS-----LGSKYEPSQVRDFVHSMSLPSS--- 592
           GS P+  + +L NF    P      +P +      L S   P  +   V  +  P +   
Sbjct: 613 GSFPQDETSHLFNFPRTNPLTTSSGWPSKRAAVDPLISSVAPQCMMSQVEQLGPPQTSIS 672

Query: 593 --------YNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSF--------TTS 636
                   + G++     ++  TD Q+ ++FGV I+ S LL+   +SS         +T+
Sbjct: 673 PSSVSLLPFPGRECPT-EQDGGTDPQSHLLFGVSIEPSSLLMQNGLSSLRGVGSDSDSTT 731

Query: 637 VDPGVSSMPLGDSGFH----NSMYGCMQDSSEL--LHNVGQIDQLTPTRTFVKVYKSGSV 690
           V    + M +  + F      +   C+ +S  L  + NVGQ +   P+RTFVKVYKSGS 
Sbjct: 732 VPFSSNYMSIAGTNFSLNPAMAPSSCIDESGFLQSMENVGQGN--PPSRTFVKVYKSGSF 789

Query: 691 GRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFV 750
           GRSLDI++FS+YNELR EL  MFG+EG+ EDPLRSGWQLVF+DRENDVLLLGD PW  FV
Sbjct: 790 GRSLDITKFSNYNELRSELAFMFGLEGQLEDPLRSGWQLVFIDRENDVLLLGDGPWPEFV 849

Query: 751 SNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANSRGNC 789
           ++VW IKILSP++VQ+MG++G+E  +    QR  S G+C
Sbjct: 850 NSVWCIKILSPQEVQQMGKRGLELLNSVPIQRL-SNGSC 887


>gi|449466121|ref|XP_004150775.1| PREDICTED: auxin response factor 6-like [Cucumis sativus]
          Length = 899

 Score =  887 bits (2293), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 509/892 (57%), Positives = 595/892 (66%), Gaps = 102/892 (11%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ + LNSELWHACAGPLVSLP VG+RVVYFPQGHSEQVAA+TN+EVD+ IPNYP+LPPQ
Sbjct: 15  GERRVLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNREVDAQIPNYPSLPPQ 74

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           LICQLHN+TMHAD ETDEVYAQMTLQPLS +E K+ ++P ELG PS+QPTNYFCKTLTAS
Sbjct: 75  LICQLHNLTMHADAETDEVYAQMTLQPLSAQELKEAYLPAELGTPSRQPTNYFCKTLTAS 134

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSVPRRAAEKVFP LDFS+QPPAQELIARDLHD EWKFRHIFRGQPKRHLLTT
Sbjct: 135 DTSTHGGFSVPRRAAEKVFPPLDFSMQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTT 194

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWSVFVSAKRLVAGD+VLFIWNEKNQLLLGIRRA RP TVMPSSVLSSDSMH+GLLAAAA
Sbjct: 195 GWSVFVSAKRLVAGDAVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHLGLLAAAA 254

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 302
           HAAAT S FT+FFNPRASPSEFVIPL KYVKAV+HTRVSVGMRFRMLFETEESSVRRYMG
Sbjct: 255 HAAATISRFTIFFNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMG 314

Query: 303 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 362
           TITGISDLDPVRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS FPLRLK
Sbjct: 315 TITGISDLDPVRWQNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLK 374

Query: 363 RPWHPSTSSF--NDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGN 420
           RPW     SF   D+     S   WLRG   ++G+  LNFQ  G+ PWMQ R++PS +G 
Sbjct: 375 RPWPTGLPSFGIKDSDLGMNSPFMWLRGDNSDRGIQCLNFQGAGVSPWMQPRLDPSMMGM 434

Query: 421 DHNQQYQAMLAAGMQSGDPVR------QQFMQLQQPF------------QYLQQSGSQNP 462
             +  YQ M  A +Q    +          +Q QQP             Q L QS  Q  
Sbjct: 435 -QSDMYQVMATAALQEMRAIDYSKISPASVLQFQQPQSLPCQSSTLMQPQMLHQSQPQQA 493

Query: 463 -LQLKQQQHLLQQLNSQAEDRAQQQQQPQQHMYH---------------DALQIRT---- 502
            LQ  Q+     Q  SQ +    Q Q PQQ   +               D  QI +    
Sbjct: 494 FLQSVQENQQHSQPQSQTQSHHLQPQLPQQSFNNHSQQHQQQPRQTQPLDHQQIPSSIPA 553

Query: 503 -DELLQRQQSNLPS----------PSFSKANFMDSSTEISVSISPMQNMLGS-LPEGSGN 550
             +     QS  PS          PSFS +N    +   S ++SP+ ++ GS + + S  
Sbjct: 554 ISQFASCSQSQSPSLQTVPSLCQQPSFSDSN---GNPATSPTVSPLHSLAGSFVQDDSSQ 610

Query: 551 LLNF--------SGAGPSMLRQQFPQQSLGSKYEPSQVRDF--------VHSMSLPSSYN 594
           LLN         S   PS      P  +  S+Y   QV            ++++LP  + 
Sbjct: 611 LLNLQRAHSVIPSAGWPSKRAAIDPLCTGASQYFLPQVEMLGTQQSSISQNTVALP-PFP 669

Query: 595 GKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFTTSVDPGVSSMPLGDSGFHNS 654
           G++  +     ++D QN V+FGV+IDSS LL+   +S+     +  VS+     S + ++
Sbjct: 670 GRECPIDDREESSDPQNHVLFGVNIDSSSLLMQNGMSTLRGVCNDSVSTTLPFSSNYMST 729

Query: 655 M------------YGCMQDSSELL--HNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFS 700
                          C+ +S  L    NVGQ++   P  TFVKV+KSG+  RSLDI++F+
Sbjct: 730 AGTNFPVNPTMTSSNCIDESGLLQSHENVGQVN--PPNGTFVKVHKSGTYSRSLDITKFN 787

Query: 701 SYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILS 760
           SY ELR EL +MFG+EG+ EDPLRSGWQLVFVDRENDVLLLGD PW  FV++VW IKILS
Sbjct: 788 SYPELRSELARMFGLEGELEDPLRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILS 847

Query: 761 PEDVQKMGEQGVE------------SFSPSSGQRANSRG-NCGRDPVGSLEY 799
           PE+VQ MG++G+E            S     G R +SR    G   VG L+Y
Sbjct: 848 PEEVQDMGKRGLELLNSVPIQRLSNSTCDDYGSRQDSRNLISGIASVGPLDY 899


>gi|356554039|ref|XP_003545357.1| PREDICTED: auxin response factor 6-like [Glycine max]
          Length = 866

 Score =  887 bits (2292), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 501/838 (59%), Positives = 582/838 (69%), Gaps = 72/838 (8%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ KCLNSELWHACAGPLVSLP VG+RVVYFPQGHSEQVAA+TN+EVD+HIPNYPNLPPQ
Sbjct: 16  GEKKCLNSELWHACAGPLVSLPLVGSRVVYFPQGHSEQVAASTNREVDAHIPNYPNLPPQ 75

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFV-PIELGIPSKQPTNYFCKTLTA 121
           LICQLHNVTMHAD ETDEVYAQMTLQPLSP+EQK+ ++ P ELG P KQPTNYFCKTLTA
Sbjct: 76  LICQLHNVTMHADAETDEVYAQMTLQPLSPQEQKEVYLLPAELGTPGKQPTNYFCKTLTA 135

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAEKVFP LD+S QPPAQELIARDLHD EWKFRHIFRGQPKRHLLT
Sbjct: 136 SDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLT 195

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP T+MPSSVLSSDSMHIGLLAAA
Sbjct: 196 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTIMPSSVLSSDSMHIGLLAAA 255

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           AHAAATNS FT+F+NPRASPSEFVIPL KYVKAV+HTR+SVGMRFRMLFETEESSV RYM
Sbjct: 256 AHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVPRYM 315

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRL 361
           GTITGISDLDPVRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS FPLRL
Sbjct: 316 GTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRL 375

Query: 362 KRPWH---PSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFL 418
           +RPW    PS     D      S   WL+GG G+QG+ +LNFQ LG+ PWMQ R++ S  
Sbjct: 376 RRPWPSGLPSLYGLKDGDMGIGSPFMWLQGGLGDQGMQSLNFQGLGVTPWMQPRLDASIP 435

Query: 419 GNDHNQQYQAMLAAGMQ---SGDPVR--QQFMQLQQPF------------QYLQQSGSQN 461
           G    + YQAM ++  Q   + DP +  Q  +Q QQ              Q L QS  QN
Sbjct: 436 G-LQPELYQAMASSAFQEIRTMDPSKSSQSLLQFQQTSNVPSAHASEVQRQVLPQSQPQN 494

Query: 462 PLQLKQQQHLL-----------QQLNSQAEDRAQQQQ---QPQQHMYHDALQIRTDELLQ 507
            L    Q++ +            + +  ++ R QQQQ    P Q    + +   ++    
Sbjct: 495 TLLHNYQENQVPAQSQLLQQQLHRYHPYSDPRQQQQQLKNLPVQQQLPNVISPLSNFASG 554

Query: 508 RQQSNLPSPSFSKANFMDSSTEI------SVSISPMQNMLGSLP-EGSGNLLNFSGAG-- 558
            Q  + P  + +      S  E+         +S + ++LGS   +G+  LLN SG+   
Sbjct: 555 TQSQSPPIQALASHCQQQSFPELMRNHISGSDVSSIHSLLGSFSQDGTSQLLNLSGSNSV 614

Query: 559 -------PSMLRQQFPQ-QSLGSKYEPSQVRDFVHSMSLPSSYNGKDAAVGTE----NCN 606
                  P  +  + PQ  S   +    QV +   S S  S         G E    +  
Sbjct: 615 MSSAAMLPKQITTEPPQLPSAAPQCVLPQVENLGTSQSNVSELAALPPFAGREHSAYHAA 674

Query: 607 TDSQNSVVFGVHIDSSGLLLPTTVSSFTTSVDPGVS-SMPL------GDSGFHNSMYGCM 659
            D Q++++FG++ID S L+L   +S+     +   S S+P       G SG    +   M
Sbjct: 675 ADPQSNLLFGINIDPSSLMLQNGMSNLRNIGNVNNSLSLPFSASNCGGASGTDFPLSSNM 734

Query: 660 Q-----DSSELLHNVGQIDQL-TPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMF 713
                 D S  L +   +DQ  TPT TFVKV+KSGS GRSLDIS+FSSY+EL  EL +MF
Sbjct: 735 TTSSCVDESGFLQSSENVDQANTPTGTFVKVHKSGSFGRSLDISKFSSYDELISELARMF 794

Query: 714 GIEGKFEDPL--RSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGE 769
           G+EG+ EDP   RSGWQLVFVDRENDVLLLGDDPW+ FV+NVWYIKILSP +VQ+MG+
Sbjct: 795 GLEGQLEDPKTQRSGWQLVFVDRENDVLLLGDDPWQEFVNNVWYIKILSPLEVQQMGK 852


>gi|449515293|ref|XP_004164684.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 6-like,
           partial [Cucumis sativus]
          Length = 884

 Score =  883 bits (2282), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 507/891 (56%), Positives = 593/891 (66%), Gaps = 102/891 (11%)

Query: 4   DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQL 63
           + + LNSELWHACAGPLVSLP VG+RVVYFPQGHSEQVAA+TN+EVD+ IPNYP+LPPQL
Sbjct: 1   ERRVLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNREVDAQIPNYPSLPPQL 60

Query: 64  ICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASD 123
           ICQLHN+TMHAD ETDEVYAQMTLQPLS +E K+ ++P ELG PS+QPTNYFCKTLTASD
Sbjct: 61  ICQLHNLTMHADAETDEVYAQMTLQPLSAQELKEAYLPAELGTPSRQPTNYFCKTLTASD 120

Query: 124 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 183
           TSTHGGFSVPRRAAEKVFP LDFS+QPPAQELIARDLHD EWKFRHIFRGQPKRHLLTTG
Sbjct: 121 TSTHGGFSVPRRAAEKVFPPLDFSMQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTG 180

Query: 184 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAH 243
           WSVFVSAKRLVAGD+VLFIWNEKNQLLLGIRRA RP TVMPSSVLSSDSMH+GLLAAAAH
Sbjct: 181 WSVFVSAKRLVAGDAVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHLGLLAAAAH 240

Query: 244 AAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGT 303
           AAAT S FT+FFNPRASPSEFVIPL KYVKAV+HTRVSVGMRFRMLFET ESSVRRYMGT
Sbjct: 241 AAATISRFTIFFNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETXESSVRRYMGT 300

Query: 304 ITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKR 363
           ITGISDLDPVRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS FPLRLKR
Sbjct: 301 ITGISDLDPVRWQNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLKR 360

Query: 364 PWHPSTSSF--NDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGND 421
           PW     SF   D+     S   WLRG   ++G+  LNFQ  G+ PWMQ R++PS +G  
Sbjct: 361 PWPTGLPSFGIKDSDLGMNSPFMWLRGDNSDRGIQCLNFQGAGVSPWMQPRLDPSMMGM- 419

Query: 422 HNQQYQAMLAAGMQSGDPVR------QQFMQLQQPF------------QYLQQSGSQNP- 462
            +  YQ M  A +Q    +          +Q QQP             Q L QS  Q   
Sbjct: 420 QSDMYQVMATAALQEMRAIDYSKISPASVLQFQQPQSLPCQSSTLMQPQMLHQSQPQQAF 479

Query: 463 LQLKQQQHLLQQLNSQAEDRAQQQQQPQQHMYH---------------DALQIRT----- 502
           LQ  Q+     Q  SQ +    Q Q PQQ   +               D  QI +     
Sbjct: 480 LQSVQENQQHSQPQSQTQSHHLQPQLPQQSFNNHSQQHQQQPRQTQPLDHQQIPSSIPAI 539

Query: 503 DELLQRQQSNLPS----------PSFSKANFMDSSTEISVSISPMQNMLGS-LPEGSGNL 551
            +     QS  PS          PSFS +N    +   S ++SP+ ++ GS + + S  L
Sbjct: 540 SQFASCSQSQSPSLQTVPSLCQQPSFSDSN---GNPATSPTVSPLHSLAGSFVQDDSSQL 596

Query: 552 LNF--------SGAGPSMLRQQFPQQSLGSKYEPSQVRDF--------VHSMSLPSSYNG 595
           LN         S   PS      P  +  S+Y   QV            ++++LP  + G
Sbjct: 597 LNLQRAHSVIPSAGWPSKRAAIDPLCTGASQYFLPQVEMLGTQQSSISQNTVALP-PFPG 655

Query: 596 KDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFTTSVDPGVSSMPLGDSGFHNSM 655
           ++  +     ++D QN V+FGV+IDSS LL+   +S+     +  VS+     S + ++ 
Sbjct: 656 RECPIDDREESSDPQNHVLFGVNIDSSSLLMQNGMSTLRGVCNDSVSTTLPFSSNYMSTA 715

Query: 656 ------------YGCMQDSSELL--HNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSS 701
                         C+ +S  L    NVGQ++   P  TFVKV+KSG+  RSLDI++F+S
Sbjct: 716 GTNFPVNPTMTSSNCIDESGLLQSHENVGQVN--PPNGTFVKVHKSGTYSRSLDITKFNS 773

Query: 702 YNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSP 761
           Y ELR EL +MFG+EG+ EDPLRSGWQLVFVDRENDVLLLGD PW  FV++VW IKILSP
Sbjct: 774 YPELRSELARMFGLEGELEDPLRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSP 833

Query: 762 EDVQKMGEQGVE------------SFSPSSGQRANSRG-NCGRDPVGSLEY 799
           E+VQ MG++G+E            S     G R +SR    G   VG L+Y
Sbjct: 834 EEVQDMGKRGLELLNSVPIQRLSNSTCDDYGSRQDSRNLISGIASVGPLDY 884


>gi|449433545|ref|XP_004134558.1| PREDICTED: auxin response factor 6-like [Cucumis sativus]
          Length = 902

 Score =  883 bits (2281), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 514/908 (56%), Positives = 608/908 (66%), Gaps = 133/908 (14%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ + LNSELWHACAGPLVSLP VG+RVVYFPQGHSEQVA +TN+EVD+HIP+YP+LPPQ
Sbjct: 17  GERRVLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAISTNREVDAHIPSYPSLPPQ 76

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           LICQLHNVTMHAD+ETDEVYAQMTLQPL+ +EQK+ ++P ELG PSKQPTNYFCKTLTAS
Sbjct: 77  LICQLHNVTMHADIETDEVYAQMTLQPLTAQEQKEPYLPAELGAPSKQPTNYFCKTLTAS 136

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSVPRRAAEKVFP LDFS QPPAQELIARDLHD EWKFRHIFRGQPKRHLLTT
Sbjct: 137 DTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTT 196

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWSVFVSAKRLVAGDSV+FIWNEKNQLLLGIRRA RP TVMPSSVLSSDSMH+GLLAAAA
Sbjct: 197 GWSVFVSAKRLVAGDSVIFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAA 256

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 302
           HAAATNS FT+F+NPRASPSEF+IPL KYVKAV+HTRVSVGMRFRMLFETEESSVRRYMG
Sbjct: 257 HAAATNSRFTIFYNPRASPSEFIIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMG 316

Query: 303 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 362
           TITGISDLD  RW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS FPLRLK
Sbjct: 317 TITGISDLDSTRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLK 376

Query: 363 RPWHPSTSSFNDNRDETA---SGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLG 419
           RPW     SF+  +++     S L WLRG   ++G+  LNF  +G+ PWMQ R++ S +G
Sbjct: 377 RPWPTGFPSFHGLKEDDLGLNSQLMWLRGDGLDRGIQPLNFPGIGVAPWMQPRLDASMVG 436

Query: 420 NDHNQQYQAMLAAGMQ---SGDPVRQQFMQLQQPFQYLQQSGSQNP-------------- 462
               + YQAM AA +Q   + DP + Q   L Q FQ  Q   ++                
Sbjct: 437 -LQPEIYQAMAAAALQEMRTVDPAKAQAASLLQ-FQQTQNLPNRPANFMPPQMLQQPQPQ 494

Query: 463 -------LQLKQQQHLLQ-QLNSQAEDRAQQQ--------QQPQQHMYHDALQI------ 500
                  LQ  + QHL   Q  SQ     QQ+         QPQQ ++ D  QI      
Sbjct: 495 PQPPQTFLQGDENQHLSHSQAQSQPTAVLQQEIKHQTFNNHQPQQQVF-DHHQIPSPMST 553

Query: 501 ---------------RTDELLQRQQSNLPSPSFSKANFMDSSTEISVSISPMQNMLGS-- 543
                          +T   L RQQ      SFS +N    ++ I   ISP+ ++LG   
Sbjct: 554 MSQFSSASQSQAQSLQTIPPLCRQQ------SFSDSNPNHVTSPI---ISPLHSLLGGSF 604

Query: 544 LPEGSGNLLNFSGAGPSMLRQQFPQQ---------SLGSKYEPSQVRDF--------VHS 586
             + S  +LN     P +    +P +         S  S++  SQ  +          ++
Sbjct: 605 SQDESSQMLNLPRTNPMIHSSTWPSKRAAIDPLLSSGNSQFVLSQGENIGTTPANISQNA 664

Query: 587 MSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTV---------------- 630
            SLP  + G++ ++  +  N D Q++++FGV+I+ S LL+   +                
Sbjct: 665 FSLP-PFPGRECSL--DQGNVDPQSNLLFGVNIEPSSLLMQNGMPNLRGICSDSDSTAIP 721

Query: 631 --SSFTTSVDPGVSSMPLGDSGFHNSMYGCMQDSSELL--HNVGQIDQLTPTRTFVKVYK 686
             S++  +     S+ P G     N    C +DS  L    N GQ++   PTRTFVKVYK
Sbjct: 722 FSSNYVNTAGTNFSANPTGTGTPSN----CNEDSGFLQSPENTGQVN--PPTRTFVKVYK 775

Query: 687 SGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPW 746
           SGS GRSLDIS+FSSY++LR EL  MFG+EG+ EDPLRSGWQLVFVDRENDVLLLGDDPW
Sbjct: 776 SGSFGRSLDISKFSSYHQLRSELAHMFGLEGELEDPLRSGWQLVFVDRENDVLLLGDDPW 835

Query: 747 EAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANSRGNC---------------GR 791
             FV++VW IKILSP++VQ MG++G+E  +    QR  S G+C               G 
Sbjct: 836 PEFVNSVWCIKILSPQEVQDMGKRGLELLNSVPIQRL-SNGSCDNYANRQESSRNMNSGI 894

Query: 792 DPVGSLEY 799
             VGSLEY
Sbjct: 895 TSVGSLEY 902


>gi|301793215|emb|CBA11998.1| putative auxin response factor 8, partial [Cabomba aquatica]
          Length = 795

 Score =  875 bits (2261), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 479/799 (59%), Positives = 557/799 (69%), Gaps = 53/799 (6%)

Query: 1   MIGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLP 60
           + G+ KCLNSELWHACAGPLV LP + +RVVYFPQGHSEQVAA+TN+EV  H+PNYP LP
Sbjct: 3   LAGEKKCLNSELWHACAGPLVCLPAISSRVVYFPQGHSEQVAASTNREVTDHVPNYPGLP 62

Query: 61  PQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLT 120
           PQLICQLH+VTMHAD ETDEVYAQMTLQPLSP+EQKD F+P ELGIP+ QPTNYFCKTLT
Sbjct: 63  PQLICQLHDVTMHADAETDEVYAQMTLQPLSPQEQKDAFLPAELGIPTNQPTNYFCKTLT 122

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
           ASDTSTHGGFSVPRRAAEKVFP LDFS QPP+QELIARDLHDVEWKFRHIFRGQPKRHLL
Sbjct: 123 ASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPSQELIARDLHDVEWKFRHIFRGQPKRHLL 182

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 240
           TTGWSVFVSAKRLV GDSV+FIWNEKNQLLLGIRRA RP TVMP SVLSSDSMHIGLLAA
Sbjct: 183 TTGWSVFVSAKRLVTGDSVIFIWNEKNQLLLGIRRAARPQTVMPYSVLSSDSMHIGLLAA 242

Query: 241 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 300
           AAHAAATNS FTVF+NPRASPSEFVI L KY+KAVF TRVSVGMRFRMLFETEESSVRRY
Sbjct: 243 AAHAAATNSRFTVFYNPRASPSEFVISLVKYIKAVFQTRVSVGMRFRMLFETEESSVRRY 302

Query: 301 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLR 360
           MGTIT ISDLDPVRW+NSHWRSVKVGWDESTAG RQPRVSLWEIEPLTTFPMYPSLFPLR
Sbjct: 303 MGTITSISDLDPVRWANSHWRSVKVGWDESTAGIRQPRVSLWEIEPLTTFPMYPSLFPLR 362

Query: 361 LKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGN 420
           LKRPW P  S  +          N  +            ++ +G+  W QQRV+ S LG 
Sbjct: 363 LKRPWLPEMSPLHSTYHRDYYNGNAFQA-----------YRDVGLNSWSQQRVDLSQLGT 411

Query: 421 DHNQQYQAMLAAGMQSGDPVRQQFMQLQQPFQYLQQSGSQNPL---QLKQQQHLLQQ--- 474
           + + Q+Q+  +    S DP +Q  +  Q   Q  Q     N +   ++ QQ   +Q+   
Sbjct: 412 EQD-QFQSAASTSWSSEDPTKQCLLGFQNSLQSTQFPSRFNLVTHSEIIQQTQPVQRQLS 470

Query: 475 ------LNSQAEDRAQ---------QQQQPQQHMYHDALQIRTDELLQRQQSNLPSPSFS 519
                 L+ Q  D+             QQP Q+  + + Q+ ++   Q   +  P     
Sbjct: 471 LPRHGMLSDQTRDQLMQQQLLQPFVDHQQPLQN-NNTSFQVLSNGQAQFPFTTTPGQGLL 529

Query: 520 KANFMDSSTEISVSISP-MQNMLGSLP--EGSGNLLNFSGAGPSMLRQQFPQ-QSLGSKY 575
              F DS+   S S++P MQ     LP  E +  L N  G    ++    PQ + +  + 
Sbjct: 530 ---FGDSTCAFSSSLTPTMQAFFTHLPCEENACLLNNLQGIKLMLIHNGSPQLKKVHFRR 586

Query: 576 EPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFTT 635
                  F     L  +   K  A  + + N      ++FGV+I+   L+LP  VS+   
Sbjct: 587 LSLLCTQFRFHRFLAEAMRSKRTATDSHDQN------ILFGVNINMESLVLPNAVSNLAA 640

Query: 636 SV-DPGVSSMPLGDSGFHN---SMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGSVG 691
               P   +M    SGFH+   S Y  ++ S  LLH+ GQ+D     +TFVKVYKSG VG
Sbjct: 641 DDGQPDTEAMQFTASGFHHPLPSAYDSLEVSPGLLHDPGQLD--PHCQTFVKVYKSGCVG 698

Query: 692 RSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVS 751
           RSLDI+RFSSYNELR+EL QMFG+EG  EDP RSGWQLV VDREND+LL+GDDPWEAFV+
Sbjct: 699 RSLDIARFSSYNELRDELCQMFGLEGLLEDPQRSGWQLVLVDRENDILLMGDDPWEAFVN 758

Query: 752 NVWYIKILSPEDVQKMGEQ 770
           +VW IKILSP+DVQ+MG Q
Sbjct: 759 SVWSIKILSPQDVQQMGAQ 777


>gi|357447187|ref|XP_003593869.1| Auxin response factor [Medicago truncatula]
 gi|355482917|gb|AES64120.1| Auxin response factor [Medicago truncatula]
          Length = 908

 Score =  873 bits (2255), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 508/916 (55%), Positives = 608/916 (66%), Gaps = 141/916 (15%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ + L+SELWHACAGPLVSLP VG+RVVYFPQGHSEQVA +TNKEVD+HIPNYP+LPPQ
Sbjct: 15  GEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNKEVDAHIPNYPSLPPQ 74

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           LICQLHN+TMHADVETDEVYAQMTLQPL+ +EQK+ ++P ELG PSKQPTNYFCKTLTAS
Sbjct: 75  LICQLHNLTMHADVETDEVYAQMTLQPLNAQEQKEAYLPAELGTPSKQPTNYFCKTLTAS 134

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSVPRRAAEKVFP LDFS QPPAQELIARDLH  EWKFRHIFRGQPKRHLLTT
Sbjct: 135 DTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHGNEWKFRHIFRGQPKRHLLTT 194

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSVLSSDSMH+GLLAAAA
Sbjct: 195 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHLGLLAAAA 254

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 302
           HAAATNS FT+F+NPRA PSEFVIPL KYVKAV+HTRVSVGMRFRMLFETEESSVRRYMG
Sbjct: 255 HAAATNSRFTIFYNPRACPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMG 314

Query: 303 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 362
           TITGI DLD VRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS FPLRLK
Sbjct: 315 TITGICDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLK 374

Query: 363 RPWHPSTSSFNDNRDE---TASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLG 419
           RPW P   SF+  +D+    +S L WLR    ++GL +LN+Q +G+ PWMQ R +P+ L 
Sbjct: 375 RPWPPGLPSFHGMKDDDFGMSSPLMWLR--DTDRGLQSLNYQGIGVNPWMQPRFDPAML- 431

Query: 420 NDHNQQYQAMLAAGMQSG----DPVRQ---QFMQLQQPFQY-------LQQSGSQNPLQL 465
           N     YQA+ AA +Q      DP +Q     +Q QQP  +       +Q    Q     
Sbjct: 432 NMQTDMYQAVAAAALQDMRTVVDPSKQLPGSLLQFQQPPNFPNRTAALMQAQMLQQSQPQ 491

Query: 466 KQQQHLLQQLNSQAEDRAQQQQQPQQHMYH------------------------------ 495
           +  Q+  Q+  + ++ + Q Q  PQQH  H                              
Sbjct: 492 QAFQNNNQENQNLSQSQPQAQTNPQQHPQHQHSFNNQLHHHSQQQQQTQQQVVDNNQQIS 551

Query: 496 ----------DALQIRTDELLQRQQSNLPSPSFSKANFMDSSTEISVSISPMQNMLG-SL 544
                      A Q ++   +Q   S     SFS +N ++SST I   +SP+ +++G S 
Sbjct: 552 GSVSTMSQFVSATQPQSPPPMQALSSLCHQQSFSDSN-VNSSTTI---VSPLHSIMGSSF 607

Query: 545 PEGSGNLL-------------NFSG------AGPSMLRQQFPQQSLGSKYEPSQVRDFV- 584
           P    +LL             N +G      A   +L     Q  L    +  Q R+ + 
Sbjct: 608 PHDESSLLMSLPRTSSWVPVQNSTGWPSKRIAVDPLLSSGASQCILPQVEQLGQARNSMS 667

Query: 585 -HSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFT--------- 634
            ++++LP  + G++ ++  E  N D Q++++FGV+ID S LLL   +S+F          
Sbjct: 668 QNAITLP-PFPGRECSIDQEGSN-DPQSNLLFGVNIDPSSLLLHNGMSNFKGISGNNNDS 725

Query: 635 ------------------TSVDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLT 676
                             +S++ GV+   +G+SGF ++     Q ++ L           
Sbjct: 726 STMSYHQSSSYMNTAGADSSLNHGVTPS-IGESGFLHTQENGEQGNNPL----------- 773

Query: 677 PTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
             +TFVKVYKSGS GRSLDI++FSSYNELR EL +MFG+EG+ EDP+RSGWQLVFVDREN
Sbjct: 774 -NKTFVKVYKSGSFGRSLDITKFSSYNELRSELARMFGLEGELEDPVRSGWQLVFVDREN 832

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGV------------ESFSPSSGQRAN 784
           DVLLLGD PW  FV++VW IKILSPE+VQ+MG  G+             S       R +
Sbjct: 833 DVLLLGDGPWPEFVNSVWCIKILSPEEVQQMGNTGLGLLNSVPIQRLSNSICDDYVSRQD 892

Query: 785 SRG-NCGRDPVGSLEY 799
           SR  + G   VGSL+Y
Sbjct: 893 SRNLSSGITTVGSLDY 908


>gi|297738133|emb|CBI27334.3| unnamed protein product [Vitis vinifera]
          Length = 486

 Score =  870 bits (2248), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 419/465 (90%), Positives = 444/465 (95%), Gaps = 4/465 (0%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ KCLNSELWHACAGPLVSLPTVG+RVVYFPQGHSEQVAATTNKEVD HIPNYP+LPPQ
Sbjct: 16  GEKKCLNSELWHACAGPLVSLPTVGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPSLPPQ 75

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           LICQLHNVTMHADVETDEVYAQMTLQPL+P+EQKDTF+P+ELGIPSKQPTNYFCKTLTAS
Sbjct: 76  LICQLHNVTMHADVETDEVYAQMTLQPLTPQEQKDTFLPVELGIPSKQPTNYFCKTLTAS 135

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRG-QPKRHLLT 181
           DTSTHGGFSVPRRAAEKVFP LDFS QPPAQELIARDLHDVEWKFRHIFRG QPKRHLLT
Sbjct: 136 DTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGRQPKRHLLT 195

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAA
Sbjct: 196 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAA 255

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           AHAAATNSCFT+F+NPRASPSEFVIPL+KYVKAVFHTRVSVGMRFRMLFETEESSVRRYM
Sbjct: 256 AHAAATNSCFTIFYNPRASPSEFVIPLSKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 315

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRL 361
           GTITGISDLDPVRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRL
Sbjct: 316 GTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRL 375

Query: 362 KRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGND 421
           KRPWHP  SS +D+RDE A+GL WLRG TG+QGL +LNFQ++GMFPW QQR++P+FLGND
Sbjct: 376 KRPWHPGASSLHDSRDEAANGLMWLRGETGDQGLQSLNFQTVGMFPWTQQRLDPTFLGND 435

Query: 422 HNQQYQAMLAAGMQ---SGDPVRQQFMQLQQPFQYLQQSGSQNPL 463
           HNQQYQAMLAAG+Q   SGDP++QQ+MQ QQPFQYLQQ+GS NPL
Sbjct: 436 HNQQYQAMLAAGLQNLGSGDPLKQQYMQFQQPFQYLQQTGSNNPL 480


>gi|222539816|gb|ACM66271.1| ARF8 [Solanum melongena]
          Length = 891

 Score =  865 bits (2235), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 507/889 (57%), Positives = 591/889 (66%), Gaps = 106/889 (11%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ KCLNSELWHACAGPLVSLP VG+RVVYFPQGHSEQVAA+TNKEVD+HIPNYP LPPQ
Sbjct: 17  GEKKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPGLPPQ 76

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDT-FVPIELGIPSKQPTNYFCKTLTA 121
           LICQLHN+TMHADVETDEVYAQMTLQPLSP+EQKD   +P ELGIPSKQPTNYFCKTLTA
Sbjct: 77  LICQLHNLTMHADVETDEVYAQMTLQPLSPQEQKDVCLLPAELGIPSKQPTNYFCKTLTA 136

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           S TSTHGGFSVPRRAAEKVFP LD+S QPP QELIA+DLH  EWKFRHIFRGQPKRHLLT
Sbjct: 137 SGTSTHGGFSVPRRAAEKVFPPLDYSQQPPCQELIAKDLHGNEWKFRHIFRGQPKRHLLT 196

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWSVFVSAKRLVAGD+V+FIWNE NQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAA
Sbjct: 197 TGWSVFVSAKRLVAGDAVIFIWNENNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAA 256

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           AHAAATNS FT+F+NPRASPSEFVIPL KYVKAV+HTR+SVGMRFRMLFETEESSVRRYM
Sbjct: 257 AHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVRRYM 316

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRL 361
           GTITGISDLDPVRW NSHWRSVKVGWDESTAG+RQPRVSLWEIEPLTTFPMYPS F LRL
Sbjct: 317 GTITGISDLDPVRWPNSHWRSVKVGWDESTAGDRQPRVSLWEIEPLTTFPMYPSPFSLRL 376

Query: 362 KRPWH---PSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFL 418
           KRPW    PS + F +      S L+WLRG  G+QG+ +LNFQ  G+ P+MQ R++ S L
Sbjct: 377 KRPWPSGLPSLTGFPNGDMAMNSPLSWLRGDMGDQGMQSLNFQGFGVTPFMQPRMDASLL 436

Query: 419 GNDHNQQYQAMLAAGMQSGDPVR---QQFMQLQQPF----------QYLQQSGS-QNPLQ 464
           G       Q  +   M + DP +   Q  MQ QQ            Q LQ S S QN +Q
Sbjct: 437 G------LQPDILQTMAALDPSKLANQSLMQFQQSIPNSSASLSQSQMLQPSHSHQNLIQ 490

Query: 465 LKQQQHLLQ----------------------QLNSQAEDRAQQQQQPQQHMYHDALQIRT 502
              + HL+                       Q   Q       Q Q QQ     +   + 
Sbjct: 491 GFSENHLISQAQMLQQQLQRRQNFNDQQQLLQPQLQQHQEVNSQFQHQQRTKAISSLSQM 550

Query: 503 DELLQRQQSNLP--SPSFSKANFMD--SSTEISVSISPMQNMLGSLP-EGSGNLLNFSGA 557
             + Q   S+LP  S + S+  F D   +   S S S MQ++L S   +G+  +LN    
Sbjct: 551 ASVTQPHLSHLPVLSSTGSQQTFSDMLGTHVNSSSNSNMQSLLSSFSRDGAPAVLNMHET 610

Query: 558 GPSMLRQQFPQQSLGSKYEPSQVRDFVHSM---------------SLPSSYNGKDAAVGT 602
            P +      ++       PS+V  FV S                SL   + G+++    
Sbjct: 611 HPLVSSSSSSKRIALESQLPSRVTPFVLSQPENVIAPNTKVSDLSSLLPPFPGRESFSDY 670

Query: 603 ENCNTDSQNSVVFG----VHI-------------DSSGLLLPTTVSSFTTSVDPGVSSMP 645
           +    DSQ++ ++G    ++I             D+  L +P  +S+FT++V    +  P
Sbjct: 671 KGAE-DSQSNALYGFTDSLNILQTGMSNMKGSSGDNGSLSIPYAISTFTSTVG---NEYP 726

Query: 646 LGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPT-RTFVKVYKSGSVGRSLDISRFSSYNE 704
           L      +S   C+ D S  L +    DQ   T R FVKV KSGS GRSLDIS+FSSY+E
Sbjct: 727 LNSDMTASS---CV-DESGFLQSSENGDQANQTNRIFVKVQKSGSFGRSLDISKFSSYHE 782

Query: 705 LREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDV 764
           LR EL +MFG+EG  EDP RSGWQLV VDRENDVLLLGDDPW+ FV+NVWYIKILSP +V
Sbjct: 783 LRSELARMFGLEGLLEDPERSGWQLVIVDRENDVLLLGDDPWQEFVNNVWYIKILSPYEV 842

Query: 765 QKMGEQGVESFSPSSGQR--------------ANSRGNCGRDPVGSLEY 799
           Q+MG++G++  +    QR                SR      P+GSL+Y
Sbjct: 843 QQMGKEGLDLLNGVRTQRLPGNVNGCDDYMNQKGSRNTMNGIPLGSLDY 891


>gi|295844306|gb|ADG43150.1| auxin response factor 16 [Zea mays]
          Length = 905

 Score =  860 bits (2221), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 497/900 (55%), Positives = 593/900 (65%), Gaps = 112/900 (12%)

Query: 4   DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQL 63
           ++KCLNSELWHACAGPLVSLP+VG+RVVYFPQGH EQVAA+TNKE+++ IPNYP+LPPQL
Sbjct: 14  EHKCLNSELWHACAGPLVSLPSVGSRVVYFPQGHGEQVAASTNKEMEAQIPNYPSLPPQL 73

Query: 64  ICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASD 123
           ICQLHNVTMHAD ETDEVYAQMTLQPLSP+E KD F+P ELG  S QPTNYFCKTLTASD
Sbjct: 74  ICQLHNVTMHADAETDEVYAQMTLQPLSPQELKDPFLPAELGTASNQPTNYFCKTLTASD 133

Query: 124 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 183
           TSTHGGFSVPRRAAEKVFP LDF+ QPPAQELIA+DLH  +WKFRHIFRGQPKRHLLTTG
Sbjct: 134 TSTHGGFSVPRRAAEKVFPPLDFNQQPPAQELIAKDLHGNDWKFRHIFRGQPKRHLLTTG 193

Query: 184 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAH 243
           WSVFVSAKRLVAGDSVLFIWN+ NQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAAAH
Sbjct: 194 WSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAH 253

Query: 244 AAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGT 303
           AA+TNS FT+F+NPRASP EFVIP+ KYVKAV+HTR+SVGMRFRMLFETEESSVRRYMGT
Sbjct: 254 AASTNSRFTIFYNPRASPCEFVIPMAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGT 313

Query: 304 ITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKR 363
           ITGISDLDPVRW NSHWRSVKVGWDESTAGE+QPRVSLWEIEPLTTFPMYPS F L LKR
Sbjct: 314 ITGISDLDPVRWPNSHWRSVKVGWDESTAGEKQPRVSLWEIEPLTTFPMYPSPFALGLKR 373

Query: 364 PWHPSTSSFNDNR-DETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGNDH 422
           PW     S    R D   S L WLR      G  +LNF  LGM PWMQ R++ S LG   
Sbjct: 374 PWPAGLPSLYGGRGDGLTSSLMWLRD-RANPGFQSLNFSGLGMSPWMQPRLDNSLLGLQS 432

Query: 423 NQQYQAMLAAGMQSGDP-VRQQFMQLQQPFQYLQQSGSQNPLQLKQQQHLLQQLNSQA-- 479
           +       AA +QS    V    MQ QQP     +S   +   L+Q Q   QQ+  Q   
Sbjct: 433 DMYQTIAAAAALQSTTKQVPPSAMQFQQPQNIADRSALLSSQILQQVQPRFQQIYPQNLN 492

Query: 480 EDRAQ-----------------------------------------------QQQQPQQH 492
           E++ Q                                               QQ Q Q+H
Sbjct: 493 ENKIQGHTQPEYLQVQQQLQRCQSFNEQKPPMHPQQQQQEPQQQQCVQTPQDQQMQEQKH 552

Query: 493 MYH-----DALQIRTDELLQRQQSNLPS-----PSFS-KANFMDSS-TEISVSISP-MQN 539
           +++     DAL   +   L     + PS     P+FS + NF D++ + +S S  P M  
Sbjct: 553 LHNFHSLPDALSAFSQ--LSPATHSPPSALQTVPAFSHQQNFPDTNISSLSPSTGPSMHG 610

Query: 540 MLGSLP-EGSGNLLNFSGAGPSMLRQQFPQQSLGSK-YEPSQVRDFVH-------SMSLP 590
           MLG LP E + +L   +   P  +   +  + +  +   P +     H       + ++P
Sbjct: 611 MLGRLPSEAASSLPCVAMNAPVSVSDPWSSKRVAVESVNPCRPHVSPHIEHLDMATCNMP 670

Query: 591 SS-----YNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFTTSVDPGVSSMP 645
            S       G++  V  + C +D QN ++FGVHIDS  LL+   + +     D    ++P
Sbjct: 671 QSSALAPLPGRECLVDEDGC-SDPQNHLLFGVHIDSHSLLMQGGIPALQN--DNSSGTIP 727

Query: 646 LGDSGFHN------------SMYGCMQDSSEL--LHNVGQIDQLTPTRTFVKVYKSGSVG 691
              S F +               GC+ +S  L    N  Q +Q     TFVKVYKSG+VG
Sbjct: 728 YSTSNFLSPSENDFPLNQPLRSAGCLDESDYLPCAENAEQANQQF--ATFVKVYKSGTVG 785

Query: 692 RSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVS 751
           R LDI+RFSSY+ELR E+G++FG+EG+ EDPLRSGWQLVFVDRE+DVLL+GDDPW+ FV+
Sbjct: 786 RLLDITRFSSYDELRSEVGRLFGLEGQLEDPLRSGWQLVFVDREDDVLLVGDDPWQEFVN 845

Query: 752 NVWYIKILSPEDVQKMGEQGVESFSPSSGQRANS-----------RG-NCGRDPVGSLEY 799
           +V  IKILSPE+VQ+MG+ G++  S +  +R  +           RG + G  PVGS+E+
Sbjct: 846 SVSCIKILSPEEVQRMGKPGIQLLSSAPSRRLGNGCDSYASMQEPRGLDAGMAPVGSVEF 905


>gi|413926489|gb|AFW66421.1| hypothetical protein ZEAMMB73_859793 [Zea mays]
          Length = 914

 Score =  860 bits (2221), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 497/900 (55%), Positives = 593/900 (65%), Gaps = 112/900 (12%)

Query: 4   DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQL 63
           ++KCLNSELWHACAGPLVSLP+VG+RVVYFPQGH EQVAA+TNKE+++ IPNYP+LPPQL
Sbjct: 23  EHKCLNSELWHACAGPLVSLPSVGSRVVYFPQGHGEQVAASTNKEMEAQIPNYPSLPPQL 82

Query: 64  ICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASD 123
           ICQLHNVTMHAD ETDEVYAQMTLQPLSP+E KD F+P ELG  S QPTNYFCKTLTASD
Sbjct: 83  ICQLHNVTMHADAETDEVYAQMTLQPLSPQELKDPFLPAELGTASNQPTNYFCKTLTASD 142

Query: 124 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 183
           TSTHGGFSVPRRAAEKVFP LDF+ QPPAQELIA+DLH  +WKFRHIFRGQPKRHLLTTG
Sbjct: 143 TSTHGGFSVPRRAAEKVFPPLDFNQQPPAQELIAKDLHGNDWKFRHIFRGQPKRHLLTTG 202

Query: 184 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAH 243
           WSVFVSAKRLVAGDSVLFIWN+ NQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAAAH
Sbjct: 203 WSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAH 262

Query: 244 AAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGT 303
           AA+TNS FT+F+NPRASP EFVIP+ KYVKAV+HTR+SVGMRFRMLFETEESSVRRYMGT
Sbjct: 263 AASTNSRFTIFYNPRASPCEFVIPMAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGT 322

Query: 304 ITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKR 363
           ITGISDLDPVRW NSHWRSVKVGWDESTAGE+QPRVSLWEIEPLTTFPMYPS F L LKR
Sbjct: 323 ITGISDLDPVRWPNSHWRSVKVGWDESTAGEKQPRVSLWEIEPLTTFPMYPSPFALGLKR 382

Query: 364 PWHPSTSSFNDNR-DETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGNDH 422
           PW     S    R D   S L WLR      G  +LNF  LGM PWMQ R++ S LG   
Sbjct: 383 PWPAGLPSLYGGRGDGLTSSLMWLRD-RANPGFQSLNFSGLGMSPWMQPRLDNSLLGLQS 441

Query: 423 NQQYQAMLAAGMQSGDP-VRQQFMQLQQPFQYLQQSGSQNPLQLKQQQHLLQQLNSQA-- 479
           +       AA +QS    V    MQ QQP     +S   +   L+Q Q   QQ+  Q   
Sbjct: 442 DMYQTIAAAAALQSTTKQVPPSAMQFQQPQNIADRSALLSSQILQQVQPRFQQIYPQNLN 501

Query: 480 EDRAQ-----------------------------------------------QQQQPQQH 492
           E++ Q                                               QQ Q Q+H
Sbjct: 502 ENKIQGHTQPEYLQVQQQLQRCQSFNEQKPPMHPQQQQQEPQQQQCVQTPQDQQMQEQKH 561

Query: 493 MYH-----DALQIRTDELLQRQQSNLPS-----PSFS-KANFMDSS-TEISVSISP-MQN 539
           +++     DAL   +   L     + PS     P+FS + NF D++ + +S S  P M  
Sbjct: 562 LHNFHSLPDALSAFSQ--LSPATHSPPSALQTVPAFSHQQNFPDTNISSLSPSTGPSMHG 619

Query: 540 MLGSLP-EGSGNLLNFSGAGPSMLRQQFPQQSLGSK-YEPSQVRDFVH-------SMSLP 590
           MLG LP E + +L   +   P  +   +  + +  +   P +     H       + ++P
Sbjct: 620 MLGRLPSEAASSLPCVAMNAPVSVSDPWSSKRVAVESVNPCRPHVSPHIEHLDMATCNMP 679

Query: 591 SS-----YNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFTTSVDPGVSSMP 645
            S       G++  V  + C +D QN ++FGVHIDS  LL+   + +     D    ++P
Sbjct: 680 QSSALAPLPGRECLVDEDGC-SDPQNHLLFGVHIDSHSLLMQGGIPALQN--DNSSGTIP 736

Query: 646 LGDSGFHN------------SMYGCMQDSSEL--LHNVGQIDQLTPTRTFVKVYKSGSVG 691
              S F +               GC+ +S  L    N  Q +Q     TFVKVYKSG+VG
Sbjct: 737 YSTSNFLSPSENDFPLNQPLRSAGCLDESDYLPCAENAEQANQQF--ATFVKVYKSGTVG 794

Query: 692 RSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVS 751
           R LDI+RFSSY+ELR E+G++FG+EG+ EDPLRSGWQLVFVDRE+DVLL+GDDPW+ FV+
Sbjct: 795 RLLDITRFSSYDELRSEVGRLFGLEGQLEDPLRSGWQLVFVDREDDVLLVGDDPWQEFVN 854

Query: 752 NVWYIKILSPEDVQKMGEQGVESFSPSSGQRANS-----------RG-NCGRDPVGSLEY 799
           +V  IKILSPE+VQ+MG+ G++  S +  +R  +           RG + G  PVGS+E+
Sbjct: 855 SVSCIKILSPEEVQRMGKPGIQLLSSAPSRRLGNGCDSYASMQEPRGLDAGMAPVGSVEF 914


>gi|102139794|gb|ABF69979.1| transcriptional factor B3 family protein [Musa acuminata]
          Length = 898

 Score =  848 bits (2191), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 501/869 (57%), Positives = 592/869 (68%), Gaps = 101/869 (11%)

Query: 6   KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 65
           +CLNSELWHACAGPLVSLP VG+RV           AA+TNKEVDS IPNYP+LPPQLIC
Sbjct: 18  RCLNSELWHACAGPLVSLPAVGSRV-----------AASTNKEVDSQIPNYPSLPPQLIC 66

Query: 66  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTS 125
           QLHNVTMHADVETDEVYAQMTLQPLS +EQKD ++P +LG PSKQPTNYFCKTLTASDTS
Sbjct: 67  QLHNVTMHADVETDEVYAQMTLQPLSAQEQKDPYLPADLGTPSKQPTNYFCKTLTASDTS 126

Query: 126 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 185
           THGGFSVPRRAAEKVFP LDFS QPPAQEL+ARDLH  EWKFRHIFRGQPKRHLLTTGWS
Sbjct: 127 THGGFSVPRRAAEKVFPPLDFSQQPPAQELVARDLHGNEWKFRHIFRGQPKRHLLTTGWS 186

Query: 186 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 245
           VFVSAKRLVAGDSVLFIWNE NQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAAAHAA
Sbjct: 187 VFVSAKRLVAGDSVLFIWNENNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAA 246

Query: 246 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 305
           ATNS FT+F+NPRASPSEFVIPLTKYVKAV+HTRVSVGMRFRMLFETEESSVRRYMGTIT
Sbjct: 247 ATNSRFTIFYNPRASPSEFVIPLTKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTIT 306

Query: 306 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPW 365
           GISDLDPVRW NSHWRSVKVGWDESTAGE+QPRVSLWEIEPLTTFPMYPS FPLR KRPW
Sbjct: 307 GISDLDPVRWPNSHWRSVKVGWDESTAGEKQPRVSLWEIEPLTTFPMYPSSFPLRFKRPW 366

Query: 366 HPSTSSFNDNRDET---ASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLG--N 420
                 F+  RD+     S L WLR G G   L +LNFQ +G+ PWMQ R+  S L    
Sbjct: 367 PTGLPFFHGGRDDEFSLNSPLMWLRDG-GNPALQSLNFQGVGVTPWMQPRLGTSMLALQP 425

Query: 421 DHNQQYQAMLAAGMQSGDPVRQ---QFMQLQQP------------FQYLQ--QSGSQNPL 463
           D +Q   A+    MQ+ D  +Q     +Q QQP             Q LQ  Q  S  PL
Sbjct: 426 DMHQTVAAVALQEMQTMDLTKQVTPAMLQFQQPQNTTSRSTPILQSQILQHAQPQSHQPL 485

Query: 464 -------QLKQQ------QHLLQQLNSQAEDRAQ----------QQQQPQQHMYHDALQ- 499
                  Q++ Q      QH LQQ +S AE + Q          + QQ QQ     A Q 
Sbjct: 486 LHTIQGNQMQSQAQSQFLQHHLQQGHSFAEQQQQQQHNLQLQIPEHQQFQQQRVLPAYQQ 545

Query: 500 ----------IRTDELLQRQQSNLPSPSFSKANFMDS--STEISVSISPMQNMLGSL-PE 546
                     + +    Q    N+ SPS    +F DS  ++  + S+SP+ N+L  + PE
Sbjct: 546 VPYGAANLSQLSSSSQSQSTTLNMISPSSQLKDFPDSNGNSVSASSVSPLDNILHQISPE 605

Query: 547 GSGNLLNFSGAGPSMLRQQFPQQSL--------GSKYEPSQVRDF--------VHSMSLP 590
            +  LL+       +    +  + +        G++   SQV           + S+ LP
Sbjct: 606 ETSQLLSLPRYAQPVTSNPWSSKRIAVESMLPSGAQSVLSQVEQIGSGQPNIPLQSVVLP 665

Query: 591 SSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLL------LPTTVSSFTTSVDPGVSSM 644
             + G++ ++  ++ N D QN  +FGV+IDSS  +      L T V+   ++  P  +  
Sbjct: 666 -PFPGRECSM-NQDGNMDIQNQHMFGVNIDSSISVQNGIRSLGTGVNGTNSTNIPYAACN 723

Query: 645 PLGDSG----FHNSMYGCMQ-DSSELLHNVGQIDQL-TPTRTFVKVYKSGSVGRSLDISR 698
            L  +G     + ++ G    D S LL +   +D++ + + TFVKVYKSGS GRSLDI+R
Sbjct: 724 LLRSAGNDFPINQAVNGSNGLDESGLLQSTENVDRVNSQSGTFVKVYKSGSFGRSLDITR 783

Query: 699 FSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKI 758
           FSSY+ELR ELG +FG+EG+ EDPLRSGWQLVFVDRE+DVLL+GDDPW+ FV++V  IKI
Sbjct: 784 FSSYHELRSELGHLFGLEGQLEDPLRSGWQLVFVDREDDVLLVGDDPWQEFVNSVSCIKI 843

Query: 759 LSPEDVQKMGEQGVESFSPSSGQRANSRG 787
           LSPE+VQ+MG+QGV+  + +  +R  S G
Sbjct: 844 LSPEEVQQMGKQGVDFVNSAPIKRLQSNG 872


>gi|379323206|gb|AFD01302.1| auxin response factor 6 [Brassica rapa subsp. pekinensis]
          Length = 832

 Score =  821 bits (2120), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 473/817 (57%), Positives = 566/817 (69%), Gaps = 54/817 (6%)

Query: 1   MIGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLP 60
           + G+ + LNSELWHACAGPLVSLP +G+RVVYFPQGHSEQVAA+TNKEVD+H PNYP+L 
Sbjct: 17  VTGEKRVLNSELWHACAGPLVSLPPLGSRVVYFPQGHSEQVAASTNKEVDAHTPNYPSLQ 76

Query: 61  PQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLT 120
           PQLICQLHNVTMHADVETDEVYAQMTLQPL+ +EQKD+++  ELG+PS+QPTNYFCKTLT
Sbjct: 77  PQLICQLHNVTMHADVETDEVYAQMTLQPLNAQEQKDSYLAAELGVPSRQPTNYFCKTLT 136

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
           ASDTSTHGGFSVPRRAAEKVFP LD++ QPPAQEL+ARDLHD EWKFRHIFRGQPKRHLL
Sbjct: 137 ASDTSTHGGFSVPRRAAEKVFPPLDYTQQPPAQELMARDLHDNEWKFRHIFRGQPKRHLL 196

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 240
           TTGWSVFVSAKRLVAGDSVLFIWN+KNQLLLGIRRA RP TVMPSSVLSSDSMH+GLLAA
Sbjct: 197 TTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRAHRPQTVMPSSVLSSDSMHLGLLAA 256

Query: 241 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 300
           AAHAA TNS FT+F+NPRAS SEFVIPL KYVKAV+HTRVSVGMRFRMLFETEESSVRRY
Sbjct: 257 AAHAAPTNSRFTIFYNPRASTSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRY 316

Query: 301 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLR 360
           MGTITGI DLDP RW+NSHWRSVKVGWDESTAG+RQPRVSLWEIEPLTTFPMYPS FPLR
Sbjct: 317 MGTITGICDLDPARWANSHWRSVKVGWDESTAGDRQPRVSLWEIEPLTTFPMYPSPFPLR 376

Query: 361 LKRPWHPSTSSFND-NRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPS-FL 418
           LKRPW     SF+    D+   G+        ++GL ++NFQ +G+ PWMQ R++ S  L
Sbjct: 377 LKRPWPSGLPSFHGLKEDDMGMGMGMSSPLMWDRGLQSMNFQGMGVNPWMQPRLDASGLL 436

Query: 419 G--NDHNQQYQAMLAAGMQSGDPVR--QQFMQLQQPFQYLQQSGSQNPLQLKQQQHLLQQ 474
           G  ND  Q   A     M+  DP +     +Q Q P  +  Q  S    Q+ QQQ   QQ
Sbjct: 437 GMQNDAYQAMAAAALQDMRGIDPAKAAASLLQFQSPSGFSMQPPSLVQPQMLQQQLSQQQ 496

Query: 475 LNSQAEDRAQQQQQPQQHMYHDALQIRTDELLQRQQSNLPSPSFSKANFMDSSTEISVSI 534
                                  LQ  T   L  QQ      SFS  N  ++       I
Sbjct: 497 QQVVDNHNLSASSAAMSQSNTSLLQSMTP--LCHQQ------SFSDTNGGNN------PI 542

Query: 535 SPMQNMLGSLPEG-SGNLLNFSGAGPSMLRQQFPQQ--SLGSKYEPSQV----RDFVHSM 587
           + +  +L + P+  S  LLN +    +M    +P +  ++ S ++ S      +  +  +
Sbjct: 543 TQLHTLLSNFPQDESSQLLNLTRTNSAMTSSGWPSKRPAIDSSFQHSTAVNNNQSVMEQL 602

Query: 588 SLPSSYNGKDAAV-------GTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSF-TTSVDP 639
               + N    AV       G E  ++D  + ++FGV+IDSS LL+P  +S+  +  ++ 
Sbjct: 603 GQSHTSNVSPNAVSLPPFPSGQEENHSDPHSHLLFGVNIDSSSLLIPNGMSNLRSIGIEG 662

Query: 640 GVS-SMPLGDSGFHNSMYGCMQDSSELLHNVG--QIDQLTPTRTFVKVYKSGSVGRSLDI 696
           G S ++P   S F+N   G M   S  +   G  Q  +   + TFVKVYKSGS GRSLDI
Sbjct: 663 GDSTTLPFTSSTFNNEFSGTMTTPSSCIEEPGFLQPSENQQSNTFVKVYKSGSFGRSLDI 722

Query: 697 SRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYI 756
           ++FSSYNELR EL +MFG+EG+ EDP+RSGWQLVFV RE             FVS+VW I
Sbjct: 723 TKFSSYNELRSELARMFGLEGQLEDPVRSGWQLVFVGREE------------FVSSVWCI 770

Query: 757 KILSPEDVQKMGEQGVESF--SPSSGQ--RANSRGNC 789
           KILSP++VQ+MG++G+E    +PSS    +  S GNC
Sbjct: 771 KILSPQEVQQMGKRGLELLNSAPSSDNVDKVPSNGNC 807


>gi|413919918|gb|AFW59850.1| hypothetical protein ZEAMMB73_643249 [Zea mays]
 gi|413919919|gb|AFW59851.1| hypothetical protein ZEAMMB73_643249 [Zea mays]
          Length = 834

 Score =  800 bits (2065), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 478/822 (58%), Positives = 566/822 (68%), Gaps = 65/822 (7%)

Query: 4   DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQL 63
           + KCLNSELWHACAGPLV LPTV TRVVYFPQGHSEQVAA+TNKEVD HIPNYPNLPPQL
Sbjct: 17  EKKCLNSELWHACAGPLVCLPTVATRVVYFPQGHSEQVAASTNKEVDGHIPNYPNLPPQL 76

Query: 64  ICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASD 123
           ICQLH+VTMHADVETDEVYAQMTLQPL+P+EQ D ++P E+GI SKQPTNYFCKTLTASD
Sbjct: 77  ICQLHDVTMHADVETDEVYAQMTLQPLNPQEQNDPYLPAEMGIMSKQPTNYFCKTLTASD 136

Query: 124 TSTHGGFSVPRRAAEKVFPSLD----FSL------------QPPAQELIARDLHDV-EWK 166
           TSTHGGFSVPRRAAE+VFP L     F L            + P      ++L +   W 
Sbjct: 137 TSTHGGFSVPRRAAERVFPPLLHAGLFGLLLQITGGIVCRQRIPLSSRQRQELRNPGSWN 196

Query: 167 FRHIFRG----QPKRHLLT-TGWSVFVSAKRL-----VAGDSVLFIWNEKNQLLLGIRRA 216
            R + R     +P R + T   W V  + +R      V G   L   NEKNQLLLGIRRA
Sbjct: 197 GRALARKSRTEKPCRTIETGRCWIVGTAQRRTGWPCGVPGGPGLG--NEKNQLLLGIRRA 254

Query: 217 IRPPTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVF 276
            RP TVMPSSVLSSDSMHIGLLAAAAHAAATNS FT+FFNPRASPSEFVIPL+KY+KAVF
Sbjct: 255 SRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFFNPRASPSEFVIPLSKYIKAVF 314

Query: 277 HTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQ 336
           HTR+SVGMRFRMLFETEESSVRRYMGTIT +SD DPVRW +S+WRSVKVGWDESTAGER 
Sbjct: 315 HTRISVGMRFRMLFETEESSVRRYMGTITEVSDADPVRWPSSYWRSVKVGWDESTAGERP 374

Query: 337 PRVSLWEIEPLTTFPMYPSLFPLRLKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLT 396
           PRVSLWEIEPLTTFPMYPSLFPLR+K PW+   ++ +D+    ++ L WLRG  GE G  
Sbjct: 375 PRVSLWEIEPLTTFPMYPSLFPLRVKHPWYSGVAALHDD----SNALMWLRGVAGEGGFQ 430

Query: 397 TLNFQSLGMFPWMQQRVEPSFLGNDHNQQYQAMLAAGMQSGDP-VRQQFMQLQQPFQYLQ 455
           +LNFQS G+  W QQR+ PS L NDH+Q    + AA     D  ++QQF+ LQQP Q  Q
Sbjct: 431 SLNFQSPGVGSWGQQRLHPSLLSNDHDQYQAVVAAAAASQSDGYLKQQFLHLQQPMQSPQ 490

Query: 456 QSGSQNPLQLK--------------QQQHLLQQLNSQAEDRAQQQQQPQQHMYHDALQ-I 500
           +  + NPL  +                Q++   LN  A  +  QQ Q  QH ++D  Q I
Sbjct: 491 EQCNLNPLLQQQILQQGSQQQMVSPDAQNIQSVLNPNAIQQQLQQFQQMQHAHNDQKQKI 550

Query: 501 RTDELLQRQQS-------NLPSPSFSKANFMD--SSTEISVSISPMQNMLGS-LPEGSGN 550
           + D+  Q   S       +LPS    K  F D   ++   +S S  +NML S   +GS  
Sbjct: 551 QPDQPYQVPSSAVLSSPTSLPSHLREKFGFSDPNVNSSSFISSSSNENMLESNFLQGSSK 610

Query: 551 LLNFSGAGPSMLRQQFPQQSLGSKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQ 610
            ++ S     ++ +Q  QQ+   K+  SQ   F  S+SL +S   KD  V  +    D Q
Sbjct: 611 SVDLSRFNQPVVSEQQQQQAWKQKFICSQSMSFGGSVSL-NSPTTKDGPVDNK-IGRDVQ 668

Query: 611 NSVVFGVHIDSSGLLLPTTVSSFTTSV-DPGVSSMPLGDSGFHNSMYGCMQDSSELLHNV 669
           N  +F   +DSS LL    V + T++V D  +S++P G +   + MYGC+ DSS LL N 
Sbjct: 669 NQTLFSPQVDSSSLLY-NMVPNLTSNVADNNISTIPSGSTYLQSPMYGCLDDSSGLLQNT 727

Query: 670 GQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQL 729
           G+ D    TRTFVKVYKSGSVGRSLDI+RFS+Y ELREELGQMFGI+G+ +DP RSGWQL
Sbjct: 728 GENDPT--TRTFVKVYKSGSVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQL 785

Query: 730 VFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 771
           VFVDRENDVLLLGDDPWE+FV++VWYIKILSPEDV KMG+ G
Sbjct: 786 VFVDRENDVLLLGDDPWESFVNSVWYIKILSPEDVHKMGKPG 827


>gi|301793213|emb|CBA11997.1| putative auxin response factor 6, partial [Cabomba aquatica]
          Length = 856

 Score =  791 bits (2043), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 468/849 (55%), Positives = 554/849 (65%), Gaps = 128/849 (15%)

Query: 45  TNKEVDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIEL 104
           TNKEVD+HIPNYP+LPPQLICQLH+V MHAD ETDEVYAQMTLQPL+ +EQKD ++P EL
Sbjct: 1   TNKEVDTHIPNYPSLPPQLICQLHDVIMHADAETDEVYAQMTLQPLTLQEQKDAYLPAEL 60

Query: 105 GIPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVE 164
           G PS+QPTNYFCK LTASDTSTHGGFSVPRRAAEKVFP LDF+ QPP+QELIARDLH  E
Sbjct: 61  GTPSRQPTNYFCKRLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPSQELIARDLHGNE 120

Query: 165 WKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMP 224
           WKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGD+V+FIWNEKNQLLLGIRR  RP +VMP
Sbjct: 121 WKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDAVIFIWNEKNQLLLGIRRGNRPQSVMP 180

Query: 225 SSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGM 284
           SSVLSSDSMHIGLLAAAAHAAATNS FTVF+ PRASPSEFVIPLT+Y KAVFHTR+SVGM
Sbjct: 181 SSVLSSDSMHIGLLAAAAHAAATNSRFTVFYXPRASPSEFVIPLTRYAKAVFHTRISVGM 240

Query: 285 RFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEI 344
           RFRMLFETEESSVRRYMGTITGI DLDP RW NSHWRS+KVGWDESTAGERQPRVSLWEI
Sbjct: 241 RFRMLFETEESSVRRYMGTITGICDLDPARWPNSHWRSIKVGWDESTAGERQPRVSLWEI 300

Query: 345 EPLTTFPMYPSLFPLRLKRPWH---PSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQ 401
           EPLTTFPMYPS FPLRL+RPW    PS     D+     S L WLRG   ++G  +LNFQ
Sbjct: 301 EPLTTFPMYPSPFPLRLRRPWPSGLPSLHGIKDDNLGLNSSLMWLRGNGIDRGFQSLNFQ 360

Query: 402 SLGMFPWMQQRVEPSFLGNDHNQQYQAMLAAGMQSGDPVRQ-----QFMQLQQ------- 449
            +G+ PWMQ R + S LG      +  M  A  Q    V +       MQ +Q       
Sbjct: 361 GIGVNPWMQPRFDSSLLG-----MHPEMAPAAFQETRTVDRTKLASTVMQFRQQLPHNMS 415

Query: 450 ----PF---QYL---------------QQSGSQNPL---QLKQQQHLL-QQLNSQAEDRA 483
               PF   Q +               Q+S  Q+ +   Q +QQ+ L+ + ++ Q   ++
Sbjct: 416 SRSVPFLQSQIMQQTQPQSQQTLRSAPQESQPQSHMLTHQFQQQRSLIHEHIHHQQTQKS 475

Query: 484 QQQQQPQQHMYHDALQIRTDELLQRQQSNLPS----------------------PSFSKA 521
            Q Q+PQQH      Q+    + Q+Q   +P+                      PS  + 
Sbjct: 476 HQCQEPQQHHQ----QLPNQNVPQQQSFQIPNIVSELSQLSQLSSSHSPSLQNVPSLCQT 531

Query: 522 -NFMDS---STEISVS-ISPMQNMLGSL-PEGSGNLLNF-------------------SG 556
            NFMDS      IS + +S +Q ++GS+ P+   +L N                      
Sbjct: 532 QNFMDSVLHDNAISATNMSALQKIMGSISPDDQSHLFNLPPTVPPVSSSSWPSKEIAVGS 591

Query: 557 AGPSMLR--QQFPQQSLGSKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVV 614
             PS  R  Q   QQS+      S      HS+SLP  + G+D+A+          NS++
Sbjct: 592 VLPSGGRSGQHTLQQSVSQTQSASH-----HSISLP-PFPGRDSAID-HGVGDPQSNSIL 644

Query: 615 FGVHIDSSGLLL--PTTVSSFT-----TSVDPGVSS--------MPLGDSGFHNSMYGCM 659
           FGV+IDSS L+   PT + + +     T+   G S+        +PL  S    S  GC 
Sbjct: 645 FGVNIDSSQLMQNGPTPIGASSNDNTQTAFSCGGSNHLTAPRAYLPLNSS--MGSSSGCF 702

Query: 660 QDSSELL---HNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIE 716
            D +  L    +VG +D   P RTFVKV+K GS GRSLDI+ FSSY+ELR EL  MFG+E
Sbjct: 703 MDENGFLTSPDDVGLVD--PPDRTFVKVHKLGSYGRSLDITNFSSYHELRSELASMFGLE 760

Query: 717 GKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFS 776
           G+ EDPLRSGWQLVFVDRENDVLLLGDDPW+ FV+NVW IKILSP++VQ+MG Q +    
Sbjct: 761 GQLEDPLRSGWQLVFVDRENDVLLLGDDPWQEFVNNVWCIKILSPQEVQQMGRQDLALLH 820

Query: 777 PSSGQRANS 785
             S QR +S
Sbjct: 821 SISLQRQDS 829


>gi|70663942|emb|CAE03604.2| OSJNBb0004A17.6 [Oryza sativa Japonica Group]
          Length = 831

 Score =  779 bits (2011), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 453/794 (57%), Positives = 531/794 (66%), Gaps = 108/794 (13%)

Query: 6   KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 65
           KCLNSELWHACAGPLV LPTVGTRVVYFPQGHSEQVAA+TNKEV+ HIPNYPNLP QLIC
Sbjct: 26  KCLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLIC 85

Query: 66  QLHNVTMHADVETDEVYAQMTLQPLSP-----------------EEQKDTFVPIELGIPS 108
           QLH+VTMHADVETDEVYAQMTLQPL+P                 +EQ D ++P E+GI S
Sbjct: 86  QLHDVTMHADVETDEVYAQMTLQPLNPVRRLGFLHDVCSAEVLMQEQNDAYLPAEMGIMS 145

Query: 109 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFR 168
           KQPTNYFCKTLTASDTSTHGGFSVPRRAAE+VFP LDF+ QPPAQELIARD+HD+EWKFR
Sbjct: 146 KQPTNYFCKTLTASDTSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFR 205

Query: 169 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVL 228
           HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSVL
Sbjct: 206 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVL 265

Query: 229 SSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM 288
           SSDSMHIGLLAAAAHAAATNS FT+F+NP                               
Sbjct: 266 SSDSMHIGLLAAAAHAAATNSRFTIFYNP------------------------------- 294

Query: 289 LFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 348
                     RYMGTIT +SD DPVRW +S+WRSVKVGWDESTAGER PRVSLWEIEPLT
Sbjct: 295 ----------RYMGTITEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLT 344

Query: 349 TFPMYPSLFPLRLKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPW 408
           TFPMYPSLFPLR+K PW+   +S +D+    ++ L WLRG  GE G  +LNFQS G+  W
Sbjct: 345 TFPMYPSLFPLRVKHPWYSGVASLHDD----SNALMWLRGVAGEGGFQSLNFQSPGIGSW 400

Query: 409 MQQRVEPSFLGNDHNQQYQAMLAAGMQSGDP-VRQQFMQLQQPFQYLQQSGSQNPLQLK- 466
            QQR+ PS L +DH+Q    + AA        ++QQF+ LQQP Q  Q+  + NPL  + 
Sbjct: 401 GQQRLHPSLLSSDHDQYQAVVAAAAASQSGGYLKQQFLHLQQPMQSPQEHCNLNPLLQQQ 460

Query: 467 -------------QQQHLLQQLNSQA--------------EDRAQQQQQPQQHMYHDALQ 499
                          Q++   L+  A              ++  +Q+ QP Q     + Q
Sbjct: 461 ILQQASQQQIINPDAQNIQTMLSPSAIQQQLQQLQQMQQVQNDQKQKIQPDQ-----SYQ 515

Query: 500 IRTDELLQRQQSNLPSPSFSKANFMD--SSTEISVSISPMQNML-GSLPEGSGNLLNFSG 556
           + T  +L    S LPS    K  F D  +++   ++ S   NML  S  +GS   ++ S 
Sbjct: 516 VPTSAVLPSPTS-LPSHLREKFGFSDPNANSSSFITSSSSDNMLDSSFLQGSSKAVDLSR 574

Query: 557 AGPSMLRQQFPQQSLG--SKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVV 614
               +  +Q  QQ      K+  SQ   F  S+ L +S   KD +V  +    D QN  +
Sbjct: 575 FNQPVASEQQQQQQQAWKQKFMGSQSVSFGGSV-LHNSPTSKDGSVENK-IGRDVQNQSL 632

Query: 615 FGVHIDSSGLLLPTTVSSFTTSVDPG-VSSMPLGDSGFHNSMYGCMQDSSELLHNVGQID 673
           F   +DSS LL    V + T++V  G +S++P G +   N+MYGC+ DSS LL N G+ D
Sbjct: 633 FSPQVDSSSLLY-NMVPNLTSNVSDGNLSTIPSGSTYLQNAMYGCLDDSSGLLQNTGEND 691

Query: 674 QLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVD 733
               TRTFVKVYKSGSVGRSLDI+RFS+Y ELREELGQMFGI+G+ +DP RSGWQLVFVD
Sbjct: 692 --PATRTFVKVYKSGSVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVD 749

Query: 734 RENDVLLLGDDPWE 747
           RENDVLLLGDDPWE
Sbjct: 750 RENDVLLLGDDPWE 763


>gi|225443952|ref|XP_002279808.1| PREDICTED: auxin response factor 6-like [Vitis vinifera]
          Length = 908

 Score =  748 bits (1931), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/457 (80%), Positives = 400/457 (87%), Gaps = 10/457 (2%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ +CLNSELWHACAGPLVSLP VG+RVVYFPQGHSEQVAA+TNKEVD+HIPNYP+LPPQ
Sbjct: 15  GEKRCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLPPQ 74

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           LICQLHNVTMHADVETDEVYAQMTLQPLSP+EQKD ++P ELG+PSKQP+NYFCKTLTAS
Sbjct: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPQEQKDAYLPAELGVPSKQPSNYFCKTLTAS 134

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSVPRRAAEKVFP LDFS QPPAQELIARDLHD EWKFRHIFRGQPKRHLLTT
Sbjct: 135 DTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTT 194

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSVLSSDSMH+GLLAAAA
Sbjct: 195 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAA 254

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 302
           HAAATNS FT+F+NPRASPSEFVIPL KY KAV+HTRVSVGMRFRMLFETEESSVRRYMG
Sbjct: 255 HAAATNSRFTIFYNPRASPSEFVIPLAKYAKAVYHTRVSVGMRFRMLFETEESSVRRYMG 314

Query: 303 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 362
           TITGISDLDPVRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS FPLRLK
Sbjct: 315 TITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLK 374

Query: 363 RPWHPSTSSFNDNRDE---TASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLG 419
           RPW P   S +  +D+     S L WLRG   ++G+ +LNFQ +G+ PWMQ R++ S LG
Sbjct: 375 RPWPPGLPSLHGIKDDDLGMNSPLMWLRGDNVDRGIQSLNFQGIGVNPWMQPRLDASMLG 434

Query: 420 NDHNQQYQAMLAAGMQ---SGDPVRQQ---FMQLQQP 450
                 YQAM AA +Q   + DP +Q     +  QQP
Sbjct: 435 L-QTDMYQAMAAAALQEMRAVDPSKQAPAPLLHYQQP 470


>gi|297740768|emb|CBI30950.3| unnamed protein product [Vitis vinifera]
          Length = 531

 Score =  744 bits (1922), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/457 (80%), Positives = 400/457 (87%), Gaps = 10/457 (2%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ +CLNSELWHACAGPLVSLP VG+RVVYFPQGHSEQVAA+TNKEVD+HIPNYP+LPPQ
Sbjct: 15  GEKRCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLPPQ 74

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           LICQLHNVTMHADVETDEVYAQMTLQPLSP+EQKD ++P ELG+PSKQP+NYFCKTLTAS
Sbjct: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPQEQKDAYLPAELGVPSKQPSNYFCKTLTAS 134

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSVPRRAAEKVFP LDFS QPPAQELIARDLHD EWKFRHIFRGQPKRHLLTT
Sbjct: 135 DTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTT 194

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSVLSSDSMH+GLLAAAA
Sbjct: 195 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAA 254

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 302
           HAAATNS FT+F+NPRASPSEFVIPL KY KAV+HTRVSVGMRFRMLFETEESSVRRYMG
Sbjct: 255 HAAATNSRFTIFYNPRASPSEFVIPLAKYAKAVYHTRVSVGMRFRMLFETEESSVRRYMG 314

Query: 303 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 362
           TITGISDLDPVRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS FPLRLK
Sbjct: 315 TITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLK 374

Query: 363 RPWHPSTSSFNDNRDE---TASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLG 419
           RPW P   S +  +D+     S L WLRG   ++G+ +LNFQ +G+ PWMQ R++ S LG
Sbjct: 375 RPWPPGLPSLHGIKDDDLGMNSPLMWLRGDNVDRGIQSLNFQGIGVNPWMQPRLDASMLG 434

Query: 420 NDHNQQYQAMLAAGMQ---SGDPVRQQ---FMQLQQP 450
                 YQAM AA +Q   + DP +Q     +  QQP
Sbjct: 435 -LQTDMYQAMAAAALQEMRAVDPSKQAPAPLLHYQQP 470


>gi|255584509|ref|XP_002532983.1| Auxin response factor, putative [Ricinus communis]
 gi|223527247|gb|EEF29407.1| Auxin response factor, putative [Ricinus communis]
          Length = 478

 Score =  742 bits (1915), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/436 (84%), Positives = 392/436 (89%), Gaps = 5/436 (1%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+N+ LNSELWHACAGPLVSLP VG+RVVYFPQGHSEQVAA+TNKEVD+HIPNYP+LPPQ
Sbjct: 15  GENRVLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLPPQ 74

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           LICQLHNVTMHADVETDEVYAQMTLQPLSP+EQKD ++P ELG P+KQPTNYFCKTLTAS
Sbjct: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPQEQKDAYLPAELGTPNKQPTNYFCKTLTAS 134

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSVPRRAAEKVFP LDFS QPPAQELIARDLHD EWKFRHIFRGQPKRHLLTT
Sbjct: 135 DTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTT 194

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSVLSSDSMH+GLLAAAA
Sbjct: 195 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAA 254

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 302
           HAAATNS FT+F+NPRASPSEFVIPL KYVKAV+HTRVSVGMRFRMLFETEESSVRRYMG
Sbjct: 255 HAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMG 314

Query: 303 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 362
           TITGISDLDPVRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS FPLRLK
Sbjct: 315 TITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLK 374

Query: 363 RPWHPSTSSFNDNRDE---TASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLG 419
           RPW P   SF+  +D+     S L WLRG   ++G+ ++NFQ LG+ PWMQ RV+ S LG
Sbjct: 375 RPWPPGLPSFHGIKDDDLGMNSPLMWLRGD-ADRGIQSMNFQGLGVTPWMQPRVDASMLG 433

Query: 420 NDHNQQYQAMLAAGMQ 435
                 YQAM AA +Q
Sbjct: 434 L-QTDMYQAMAAAALQ 448


>gi|301793207|emb|CBA11994.1| putative auxin response factor 6 [Amborella trichopoda]
          Length = 914

 Score =  737 bits (1902), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/436 (83%), Positives = 390/436 (89%), Gaps = 5/436 (1%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ +CLNSELWHACAGPLVSLP VG+RVVYFPQGHSEQVAA+TNKEVD+HIPNYP+LPPQ
Sbjct: 15  GEKRCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLPPQ 74

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           LICQLHNVTMHADVETDEVYAQMTLQPL+P+EQKD F+P +LG   KQPTNYFCKTLTAS
Sbjct: 75  LICQLHNVTMHADVETDEVYAQMTLQPLNPQEQKDAFLPADLGTSGKQPTNYFCKTLTAS 134

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSVPRRAAEKVFP LDF+ QPPAQELIARDLHD EWKFRHIFRGQPKRHLLTT
Sbjct: 135 DTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTT 194

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAAA
Sbjct: 195 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAA 254

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 302
           HAAATNS FT+F+NPRASPSEFVIPL KYVKAV+HTRVSVGMRFRMLFETEESSVRRYMG
Sbjct: 255 HAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMG 314

Query: 303 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 362
           TITGISDLDPVRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS FPLRLK
Sbjct: 315 TITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLK 374

Query: 363 RPWHPSTSSFNDNRDE---TASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLG 419
           RPW P   S + N+D+    ++ L WLR G  ++ + +LNFQ LG+ PWM QR + S LG
Sbjct: 375 RPWPPGLPSLHGNKDDDLGMSAPLMWLRDG-ADRNMQSLNFQGLGVSPWMPQRFDSSLLG 433

Query: 420 NDHNQQYQAMLAAGMQ 435
              +  YQAM AA +Q
Sbjct: 434 M-QSDVYQAMAAAALQ 448



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 124/309 (40%), Positives = 170/309 (55%), Gaps = 51/309 (16%)

Query: 517 SFSKANFMDSSTEISVSISPMQNMLGSLPEGSGNLLNFSGAGPSMLRQQ--FPQQSLGSK 574
           SFS +N    +T    SISP+Q++LGS P    + LN      + L +    P     SK
Sbjct: 590 SFSDSNGNPVTT---TSISPLQSILGSFPPDESSHLNLPRTNSATLPRDHMLPSAPWLSK 646

Query: 575 Y-----------------------EPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQN 611
                                   +P+  +  V  +  P    G++ +V  E    D Q+
Sbjct: 647 RISIDSSLPSGGPIVLPHVEQLATQPNMAQHPVSLLPFP----GRECSVDQEGSVGDPQS 702

Query: 612 SVVFGVHIDSSGLLLPTTVSSFTT---SVDPGVS-----SMPLGDSG--FHN---SMYGC 658
            ++FGV+IDSS L++   VS+       +DP  +     S  LG++G  F N   +  GC
Sbjct: 703 HLLFGVNIDSSSLMMQNGVSALRGLGGDIDPSAALSYAASNFLGNTGTDFLNPGMAGSGC 762

Query: 659 MQDSSELL--HNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIE 716
           + +S  L    NVGQI+     + FVKV KSGS GRSL+I+RFSSY ELR EL +MFG+E
Sbjct: 763 LNESGFLPSPENVGQIN----PQNFVKVCKSGSFGRSLEITRFSSYLELRSELARMFGLE 818

Query: 717 GKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFS 776
           G+ EDPLRSGWQL+++DR+NDVLLLGDDPW  FV N   IKILSP+++Q+MG+QG+E   
Sbjct: 819 GQLEDPLRSGWQLIYIDRDNDVLLLGDDPWPDFVKNASCIKILSPQELQQMGKQGIELLR 878

Query: 777 PSSGQRANS 785
               QR  S
Sbjct: 879 TVPMQRQQS 887


>gi|357166682|ref|XP_003580798.1| PREDICTED: auxin response factor 12-like [Brachypodium distachyon]
          Length = 831

 Score =  726 bits (1873), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/458 (77%), Positives = 396/458 (86%), Gaps = 5/458 (1%)

Query: 6   KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 65
           K LNSELWHACAGPLV LPTVGTRVVYFPQGHSEQVAA+TNKEV+ HIPNYPNLPPQLIC
Sbjct: 28  KNLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPPQLIC 87

Query: 66  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTS 125
           QLH+VTMHADVETDEVYAQMTLQPL+P+EQ D ++P E+GI SKQPTNYFCKTLTASDTS
Sbjct: 88  QLHDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQPTNYFCKTLTASDTS 147

Query: 126 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 185
           THGGFSVPRRAAE+VFP LDF+ QPPAQELIARD+HDVEWKFRHIFRGQPKRHLLTTGWS
Sbjct: 148 THGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDVEWKFRHIFRGQPKRHLLTTGWS 207

Query: 186 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 245
           VFVSAKRLVAGDSVLFIWNEKNQL LGIRRA R  TVMPSSVLSSDSMHIGLLAAAAHAA
Sbjct: 208 VFVSAKRLVAGDSVLFIWNEKNQLWLGIRRASRTQTVMPSSVLSSDSMHIGLLAAAAHAA 267

Query: 246 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 305
           +TNS FT+F+NPRA PSEFVIPL+KY+KAVFHTR+SVGMRFRMLFETEESSVRRYMGTIT
Sbjct: 268 STNSRFTIFYNPRACPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTIT 327

Query: 306 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPW 365
            +SD DPVRW++S+WRSVKVGWDESTAGER PRVSLWEIEPLTTFPMYPSLFPLR+K PW
Sbjct: 328 EVSDADPVRWASSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFPMYPSLFPLRVKHPW 387

Query: 366 HPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGNDHNQQ 425
           +   +  +D+    ++ L WLRG  G+ G  +LNFQS G+ PW QQR+ PS +  DH+Q 
Sbjct: 388 YSGVAGLHDD----SNALMWLRGVAGDGGYQSLNFQSPGIGPWGQQRLHPSLMSTDHDQY 443

Query: 426 YQAMLAAGMQSGDP-VRQQFMQLQQPFQYLQQSGSQNP 462
              + AA        ++QQF+ LQQP Q  Q+  + NP
Sbjct: 444 QAVVAAAAASQSGGYMKQQFLNLQQPMQSPQEHCNLNP 481


>gi|357161592|ref|XP_003579140.1| PREDICTED: auxin response factor 25-like [Brachypodium distachyon]
          Length = 934

 Score =  719 bits (1857), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/489 (75%), Positives = 404/489 (82%), Gaps = 21/489 (4%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ +CLNSELWHACAGPLVSLP VG+RV+YFPQGHSEQVAA+TNKEVD  IPNYPNLPPQ
Sbjct: 58  GEQRCLNSELWHACAGPLVSLPVVGSRVIYFPQGHSEQVAASTNKEVDGQIPNYPNLPPQ 117

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQK+ F+PIELG  SKQPTNYFCKTLTAS
Sbjct: 118 LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKEPFLPIELGAASKQPTNYFCKTLTAS 177

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSVPRR+AEKVFP LDFSLQPP QELIARDLHD EWKFRHIFRGQPKRHLLTT
Sbjct: 178 DTSTHGGFSVPRRSAEKVFPPLDFSLQPPCQELIARDLHDNEWKFRHIFRGQPKRHLLTT 237

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWSVFVSAKRLVAGDSV+FIWN+ NQLLLGIR A RP T+MPSSVLSSDSMHIGLLAAAA
Sbjct: 238 GWSVFVSAKRLVAGDSVIFIWNDNNQLLLGIRHANRPQTIMPSSVLSSDSMHIGLLAAAA 297

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 302
           HAAATNS FT+F+NPR+SPSEFVIPL KYVK+V+HTRVSVGMRFRMLFETEESSVRRYMG
Sbjct: 298 HAAATNSRFTIFYNPRSSPSEFVIPLAKYVKSVYHTRVSVGMRFRMLFETEESSVRRYMG 357

Query: 303 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 362
           T+T ISDLD VRW NSHWRSVKVGWDESTAGE+QPRVSLWEIEPLTTFPMYP+ FPLRLK
Sbjct: 358 TVTAISDLDSVRWPNSHWRSVKVGWDESTAGEKQPRVSLWEIEPLTTFPMYPTAFPLRLK 417

Query: 363 RPWHPSTSS----FNDNRDET---ASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEP 415
           RPW     S    FN  +++     S L WL  G G++G  + NFQ LG+ PW+Q R+E 
Sbjct: 418 RPWASGLPSMHGMFNGVKNDDFARYSSLMWL--GNGDRGTQSSNFQGLGVSPWLQPRIES 475

Query: 416 SFLGNDHNQQYQAMLAAGMQ---SGDPVRQQFMQLQQPFQYLQ--QSGSQNPLQLKQQQH 470
             LG   +  YQ M AA ++   +GDP+ Q    LQ  FQ  Q    G  +P       H
Sbjct: 476 PLLGLKPD-TYQQMAAAALEEIRAGDPLIQSSALLQ--FQQTQNLNGGLDSPY----ANH 528

Query: 471 LLQQLNSQA 479
           +LQQ+  Q+
Sbjct: 529 VLQQMQYQS 537



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 76/134 (56%), Positives = 99/134 (73%), Gaps = 4/134 (2%)

Query: 658 CMQDSSELLHNVGQIDQLTPTR--TFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGI 715
           C+ +S+   +++  I  + P++  TFVKVYKSGS GRSLDI++FSSY ELR EL  +FG+
Sbjct: 779 CLGESATF-NSLDNICGVNPSQGGTFVKVYKSGSPGRSLDITKFSSYYELRSELEHLFGL 837

Query: 716 EGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESF 775
           EG+ EDP+RSGWQLVFVDREND+LL+GDDPW+ FV++VW IKILSP+DV +M   G E  
Sbjct: 838 EGQLEDPVRSGWQLVFVDRENDILLVGDDPWQEFVNSVWCIKILSPQDVHQMVRNG-EGL 896

Query: 776 SPSSGQRANSRGNC 789
             +SG R      C
Sbjct: 897 LSASGARMMQGNVC 910


>gi|79318949|ref|NP_001031115.1| auxin response factor 6 [Arabidopsis thaliana]
 gi|238054274|sp|Q9ZTX8.2|ARFF_ARATH RecName: Full=Auxin response factor 6
 gi|49616351|gb|AAT67072.1| ARF6 [Arabidopsis thaliana]
 gi|332193086|gb|AEE31207.1| auxin response factor 6 [Arabidopsis thaliana]
          Length = 935

 Score =  719 bits (1855), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/440 (80%), Positives = 388/440 (88%), Gaps = 11/440 (2%)

Query: 1   MIGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLP 60
           + G+ + LNSELWHACAGPLVSLP VG+RVVYFPQGHSEQVAA+TNKEVD+HIPNYP+L 
Sbjct: 15  VTGEKRVLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLH 74

Query: 61  PQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLT 120
           PQLICQLHNVTMHADVETDEVYAQMTLQPL+ +EQKD ++P ELG+PS+QPTNYFCKTLT
Sbjct: 75  PQLICQLHNVTMHADVETDEVYAQMTLQPLNAQEQKDPYLPAELGVPSRQPTNYFCKTLT 134

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
           ASDTSTHGGFSVPRRAAEKVFP LD+S QPPAQEL+ARDLHD EWKFRHIFRGQPKRHLL
Sbjct: 135 ASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWKFRHIFRGQPKRHLL 194

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 240
           TTGWSVFVSAKRLVAGDSVLFIWN+KNQLLLGIRRA RP TVMPSSVLSSDSMH+GLLAA
Sbjct: 195 TTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAA 254

Query: 241 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 300
           AAHAAATNS FT+F+NPRASPSEFVIPL KYVKAV+HTRVSVGMRFRMLFETEESSVRRY
Sbjct: 255 AAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRY 314

Query: 301 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLR 360
           MGTITGI DLDP RW+NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS FPLR
Sbjct: 315 MGTITGICDLDPTRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLR 374

Query: 361 LKRPWHPSTSSFNDNRDE-----TASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEP 415
           LKRPW P   SF+  +++      +S L W      ++GL +LNFQ +G+ PWMQ R++ 
Sbjct: 375 LKRPWPPGLPSFHGLKEDDMGMSMSSPLMW------DRGLQSLNFQGMGVNPWMQPRLDT 428

Query: 416 SFLGNDHNQQYQAMLAAGMQ 435
           S L    N  YQAM AA +Q
Sbjct: 429 SGLLGMQNDVYQAMAAAALQ 448



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 109/220 (49%), Positives = 149/220 (67%), Gaps = 15/220 (6%)

Query: 585 HSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSF-TTSVDPGVSS 643
           +++SLP    G++ ++  E   +D  + ++FGV+IDSS LL+P  +S+  +  ++ G S+
Sbjct: 691 NAVSLPPFPGGRECSIEQEGSASDPHSHLLFGVNIDSSSLLMPNGMSNLRSIGIEGGDST 750

Query: 644 -MPLGDSGFHNSMYGCMQ--------DSSELLHNVGQIDQLTP-TRTFVKVYKSGSVGRS 693
            +P   S F+N   G +         D S  L +   +    P + TFVKVYKSGS GRS
Sbjct: 751 TLPFTSSNFNNDFSGNLAMTTPSSCIDESGFLQSSENLGSENPQSNTFVKVYKSGSFGRS 810

Query: 694 LDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNV 753
           LDIS+FSSY+ELR EL +MFG+EG+ EDP+RSGWQLVFVDRENDVLLLGDDPW  FVS+V
Sbjct: 811 LDISKFSSYHELRSELARMFGLEGQLEDPVRSGWQLVFVDRENDVLLLGDDPWPEFVSSV 870

Query: 754 WYIKILSPEDVQKMGEQGVESF--SPSSGQ--RANSRGNC 789
           W IKILSP++VQ+MG++G+E    +PSS    +  S GNC
Sbjct: 871 WCIKILSPQEVQQMGKRGLELLNSAPSSNNVDKLPSNGNC 910


>gi|15220728|ref|NP_174323.1| auxin response factor 6 [Arabidopsis thaliana]
 gi|12322119|gb|AAG51093.1|AC025295_1 auxin response factor 6 (ARF6) [Arabidopsis thaliana]
 gi|4102600|gb|AAD01513.1| ARF6 [Arabidopsis thaliana]
 gi|332193085|gb|AEE31206.1| auxin response factor 6 [Arabidopsis thaliana]
          Length = 933

 Score =  719 bits (1855), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/438 (80%), Positives = 387/438 (88%), Gaps = 11/438 (2%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ + LNSELWHACAGPLVSLP VG+RVVYFPQGHSEQVAA+TNKEVD+HIPNYP+L PQ
Sbjct: 15  GEKRVLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLHPQ 74

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           LICQLHNVTMHADVETDEVYAQMTLQPL+ +EQKD ++P ELG+PS+QPTNYFCKTLTAS
Sbjct: 75  LICQLHNVTMHADVETDEVYAQMTLQPLNAQEQKDPYLPAELGVPSRQPTNYFCKTLTAS 134

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSVPRRAAEKVFP LD+S QPPAQEL+ARDLHD EWKFRHIFRGQPKRHLLTT
Sbjct: 135 DTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWKFRHIFRGQPKRHLLTT 194

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWSVFVSAKRLVAGDSVLFIWN+KNQLLLGIRRA RP TVMPSSVLSSDSMH+GLLAAAA
Sbjct: 195 GWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAA 254

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 302
           HAAATNS FT+F+NPRASPSEFVIPL KYVKAV+HTRVSVGMRFRMLFETEESSVRRYMG
Sbjct: 255 HAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMG 314

Query: 303 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 362
           TITGI DLDP RW+NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS FPLRLK
Sbjct: 315 TITGICDLDPTRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLK 374

Query: 363 RPWHPSTSSFNDNRDE-----TASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSF 417
           RPW P   SF+  +++      +S L W      ++GL +LNFQ +G+ PWMQ R++ S 
Sbjct: 375 RPWPPGLPSFHGLKEDDMGMSMSSPLMW------DRGLQSLNFQGMGVNPWMQPRLDTSG 428

Query: 418 LGNDHNQQYQAMLAAGMQ 435
           L    N  YQAM AA +Q
Sbjct: 429 LLGMQNDVYQAMAAAALQ 446



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 109/220 (49%), Positives = 149/220 (67%), Gaps = 15/220 (6%)

Query: 585 HSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSF-TTSVDPGVSS 643
           +++SLP    G++ ++  E   +D  + ++FGV+IDSS LL+P  +S+  +  ++ G S+
Sbjct: 689 NAVSLPPFPGGRECSIEQEGSASDPHSHLLFGVNIDSSSLLMPNGMSNLRSIGIEGGDST 748

Query: 644 -MPLGDSGFHNSMYGCMQ--------DSSELLHNVGQIDQLTP-TRTFVKVYKSGSVGRS 693
            +P   S F+N   G +         D S  L +   +    P + TFVKVYKSGS GRS
Sbjct: 749 TLPFTSSNFNNDFSGNLAMTTPSSCIDESGFLQSSENLGSENPQSNTFVKVYKSGSFGRS 808

Query: 694 LDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNV 753
           LDIS+FSSY+ELR EL +MFG+EG+ EDP+RSGWQLVFVDRENDVLLLGDDPW  FVS+V
Sbjct: 809 LDISKFSSYHELRSELARMFGLEGQLEDPVRSGWQLVFVDRENDVLLLGDDPWPEFVSSV 868

Query: 754 WYIKILSPEDVQKMGEQGVESF--SPSSGQ--RANSRGNC 789
           W IKILSP++VQ+MG++G+E    +PSS    +  S GNC
Sbjct: 869 WCIKILSPQEVQQMGKRGLELLNSAPSSNNVDKLPSNGNC 908


>gi|297851462|ref|XP_002893612.1| hypothetical protein ARALYDRAFT_473256 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339454|gb|EFH69871.1| hypothetical protein ARALYDRAFT_473256 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 891

 Score =  718 bits (1853), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/440 (80%), Positives = 387/440 (87%), Gaps = 11/440 (2%)

Query: 1   MIGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLP 60
           + G+ + LNSELWHACAGPLVSLP VG+RVVYFPQGHSEQVAA+TNKEVD+HIPNYP+L 
Sbjct: 15  VTGEKRVLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLH 74

Query: 61  PQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLT 120
           PQLICQLHNVTMHADVETDEVYAQMTLQPL+ +EQKD ++P ELG+PS+QPTNYFCKTLT
Sbjct: 75  PQLICQLHNVTMHADVETDEVYAQMTLQPLNAQEQKDPYLPAELGVPSRQPTNYFCKTLT 134

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
           ASDTSTHGGFSVPRRAAEKVFP LD+S QPPAQEL+ARDLHD EWKFRHIFRGQPKRHLL
Sbjct: 135 ASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWKFRHIFRGQPKRHLL 194

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 240
           TTGWSVFVSAKRLVAGDSVLFIWN+KNQLLLGIRRA RP TVMPSSVLSSDSMH+GLLAA
Sbjct: 195 TTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAA 254

Query: 241 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 300
           AAHAAATNS FT+F+NPRASPSEFVIPL KYVKAV+HTRVSVGMRFRMLFETEESSVRRY
Sbjct: 255 AAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRY 314

Query: 301 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLR 360
           MGTITGI DLDP RW+NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS FPLR
Sbjct: 315 MGTITGICDLDPSRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLR 374

Query: 361 LKRPWHPSTSSFNDNRDE-----TASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEP 415
           LKRPW P   SF+  +++      +S L W      ++GL +LNFQ +G  PWMQ R++ 
Sbjct: 375 LKRPWPPGLPSFHGLKEDDMGMSMSSPLMW------DRGLQSLNFQGMGGNPWMQPRLDA 428

Query: 416 SFLGNDHNQQYQAMLAAGMQ 435
           S L    N  YQAM AA +Q
Sbjct: 429 SGLLGMQNDVYQAMAAAALQ 448


>gi|115444427|ref|NP_001045993.1| Os02g0164900 [Oryza sativa Japonica Group]
 gi|75259114|sp|Q6H6V4.1|ARFF_ORYSJ RecName: Full=Auxin response factor 6; AltName: Full=OsARF6a
 gi|158512870|sp|A2X1A1.1|ARFF_ORYSI RecName: Full=Auxin response factor 6; AltName: Full=OsARF6a
 gi|49388055|dbj|BAD25169.1| putative auxin response transcription factor(ARF6) [Oryza sativa
           Japonica Group]
 gi|49388412|dbj|BAD25545.1| putative auxin response transcription factor(ARF6) [Oryza sativa
           Japonica Group]
 gi|113535524|dbj|BAF07907.1| Os02g0164900 [Oryza sativa Japonica Group]
 gi|125538216|gb|EAY84611.1| hypothetical protein OsI_05979 [Oryza sativa Indica Group]
 gi|125580929|gb|EAZ21860.1| hypothetical protein OsJ_05506 [Oryza sativa Japonica Group]
 gi|215697842|dbj|BAG92035.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 908

 Score =  718 bits (1853), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/449 (79%), Positives = 383/449 (85%), Gaps = 3/449 (0%)

Query: 4   DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQL 63
           + KCLNSELWHACAGPLVSLP VG+RVVYFPQGHSEQVAA+TNKE++S IPNYPNLPPQL
Sbjct: 23  EQKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLPPQL 82

Query: 64  ICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASD 123
           ICQLHNVTMHAD ETDEVYAQMTLQPLSP+E KD F+P ELG  SKQPTNYFCKTLTASD
Sbjct: 83  ICQLHNVTMHADAETDEVYAQMTLQPLSPQELKDPFLPAELGTASKQPTNYFCKTLTASD 142

Query: 124 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 183
           TSTHGGFSVPRRAAEKVFP LDF+ QPPAQEL+A+DLH  EWKFRHIFRGQPKRHLLTTG
Sbjct: 143 TSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELMAKDLHGNEWKFRHIFRGQPKRHLLTTG 202

Query: 184 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAH 243
           WSVFVSAKRLVAGDSVLFIWN+ NQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAAAH
Sbjct: 203 WSVFVSAKRLVAGDSVLFIWNDSNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAH 262

Query: 244 AAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGT 303
           AA+TNS FT+F+NPRASPSEFVIPL KYVKAV+HTR+SVGMRFRMLFETEESSVRRYMGT
Sbjct: 263 AASTNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGT 322

Query: 304 ITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKR 363
           ITGISDLDPVRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS FPLRLKR
Sbjct: 323 ITGISDLDPVRWMNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLKR 382

Query: 364 PWHPSTSS-FNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGNDH 422
           PW     S +    D+ AS L WLR  +   G  +LNF  LGM PWMQ R++ S LG   
Sbjct: 383 PWPTGLPSLYGGKEDDLASSLMWLR-DSQNTGFQSLNFGGLGMSPWMQPRLDSSLLGLQP 441

Query: 423 NQQYQAMLAAGMQ-SGDPVRQQFMQLQQP 450
           +       AA +Q +   V    +Q QQP
Sbjct: 442 DMYQTIAAAAALQNTTKQVSPAMLQFQQP 470



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 104/230 (45%), Positives = 146/230 (63%), Gaps = 30/230 (13%)

Query: 595 GKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFTTSVDPGVSSMPLGDSGFHN- 653
           G++  V  ++ ++D QN  +FGV+IDS  LL+   + S     +   S++P   S F + 
Sbjct: 684 GRECLVD-QDGSSDPQNHFLFGVNIDSQSLLMQDGIPSLHN--ENSSSTIPYSTSNFLSP 740

Query: 654 -----------SMYGCMQDSSEL--LHNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFS 700
                      +  GC+ +S  +    N  Q+ +  P  TFVKVYKSG+VGR LDI+RFS
Sbjct: 741 SQDDYPLSQTLTTPGCLDESGYVPCSDNADQVKR--PHATFVKVYKSGTVGRLLDITRFS 798

Query: 701 SYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILS 760
           SY+ELR E+G++FG+EG+ EDPLRSGWQLVFVDRE+DVLL+GDDPW+ FV++V  IKILS
Sbjct: 799 SYHELRSEVGRLFGLEGQLEDPLRSGWQLVFVDREDDVLLVGDDPWQEFVNSVSCIKILS 858

Query: 761 PEDVQKMGEQGVESFSPSSGQRANSRGN-----------CGRDPVGSLEY 799
           P++VQ+MG+ G+E FS S+ +  NS  N            G   VGS+E+
Sbjct: 859 PQEVQQMGKPGIELFSTSARRLGNSCDNYMSRQESRSLSTGIASVGSVEF 908


>gi|414868951|tpg|DAA47508.1| TPA: hypothetical protein ZEAMMB73_035781 [Zea mays]
          Length = 897

 Score =  718 bits (1853), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/446 (80%), Positives = 386/446 (86%), Gaps = 9/446 (2%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ +CLNSELWHACAGPLVSLP VG+RVVYFPQGHSEQVAA+TNKEVD+ IPNYPNLPPQ
Sbjct: 17  GEQRCLNSELWHACAGPLVSLPVVGSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQ 76

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           LICQLHNVTMHAD ET+EVYAQMTLQPLSPEEQKD F+PIELG  SKQPTNYFCKTLTAS
Sbjct: 77  LICQLHNVTMHADAETEEVYAQMTLQPLSPEEQKDPFLPIELGAGSKQPTNYFCKTLTAS 136

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSVPRRAAEKVFP LDFS QPP QEL+ARDLHD EWKFRHIFRGQPKRHLLTT
Sbjct: 137 DTSTHGGFSVPRRAAEKVFPPLDFSQQPPVQELVARDLHDNEWKFRHIFRGQPKRHLLTT 196

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWSVFVSAKRLVAGDS++FIWN+ NQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAAA
Sbjct: 197 GWSVFVSAKRLVAGDSIIFIWNDNNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAA 256

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 302
           HAAATNS FT+F+NPRASPSEFVIPL KYVKAV+HTRVSVGMRFRMLFETEESSVRRYMG
Sbjct: 257 HAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMG 316

Query: 303 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 362
           TITGISDLD  RW NSHWRSVKVGWDESTAG++QPRVSLWEIEPLTTFPMYP+ FPLRLK
Sbjct: 317 TITGISDLDSERWPNSHWRSVKVGWDESTAGDKQPRVSLWEIEPLTTFPMYPTAFPLRLK 376

Query: 363 RPWHPSTSSFNDNR-DETA--SGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLG 419
           RPW      FN  R DE A  S L WLR   G +G  +LNFQ LG  PW+Q R++   L 
Sbjct: 377 RPWASGLPMFNGGRSDEFARYSSLMWLR--DGNRGAQSLNFQGLGASPWLQPRIDNPLLS 434

Query: 420 NDHNQQYQAMLAAGMQ---SGDPVRQ 442
              +  YQ M AA ++   +GD ++Q
Sbjct: 435 LKPD-TYQQMAAAALEEIRAGDHLKQ 459


>gi|356525110|ref|XP_003531170.1| PREDICTED: auxin response factor 6-like [Glycine max]
          Length = 904

 Score =  717 bits (1852), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 359/464 (77%), Positives = 395/464 (85%), Gaps = 12/464 (2%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ + L+SELWHACAGPLVSLP VG+RVVYFPQGHSEQVA +TN+EVD HIPNYP+LPPQ
Sbjct: 15  GEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNREVDGHIPNYPSLPPQ 74

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           LICQLHN+TMHAD ETDEVYAQMTLQPL+P+EQK  ++P ELG PSKQPTNYFCK LTAS
Sbjct: 75  LICQLHNLTMHADTETDEVYAQMTLQPLNPQEQKGAYLPAELGTPSKQPTNYFCKILTAS 134

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSVPRRAAEKVFP LDFS QPP QELIARDLH  EWKFRHIFRGQPKRHLLTT
Sbjct: 135 DTSTHGGFSVPRRAAEKVFPPLDFSQQPPCQELIARDLHGNEWKFRHIFRGQPKRHLLTT 194

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP  VMPSSVLSSDSMH+GLLAAAA
Sbjct: 195 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQPVMPSSVLSSDSMHLGLLAAAA 254

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 302
           HAAATNS FT+F+NPRASPSEFVIPL KYVKAV+HTRVSVGMRFRMLFETEESSVRRYMG
Sbjct: 255 HAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMG 314

Query: 303 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 362
           TITGISDLD +RW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS FPLRLK
Sbjct: 315 TITGISDLDSIRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLK 374

Query: 363 RPWHPSTSSFNDNRDE---TASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLG 419
           RPW P    F+  +D+     S L WLR    ++GL +LNFQ +G+ PWMQ R++PS + 
Sbjct: 375 RPWPPGLPLFHGLKDDDFGINSSLMWLRD--TDRGLPSLNFQGIGVSPWMQPRLDPSMV- 431

Query: 420 NDHNQQYQAMLAAGMQ---SGDPVRQQ---FMQLQQPFQYLQQS 457
           N  +  YQAM AA +Q   + +P +Q     +Q QQP  +  Q+
Sbjct: 432 NYQSDMYQAMAAAALQDMWTSNPSKQHPTSSIQFQQPQNFPNQT 475



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 105/234 (44%), Positives = 144/234 (61%), Gaps = 24/234 (10%)

Query: 585 HSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFT-TSVDPGVSS 643
           + ++LP+ + G++  +   N   D QN ++FGV+I+ S LL+   +SS    S +    +
Sbjct: 676 NGIALPA-FPGRECTIEGSN---DPQNHLLFGVNIEPSSLLMHNGMSSLKGVSSNSDSPT 731

Query: 644 MPLGDSGFHNSMYGCMQDSSELLHNVGQIDQL-TP---------TRTFVKVYKSGSVGRS 693
           +P   S + N+       +  + HN+G+   L TP          +TFVKVYKSGS GRS
Sbjct: 732 IPFQSSNYLNTTGPDSSLNPGMTHNIGETGFLQTPENGGQGNPSNKTFVKVYKSGSFGRS 791

Query: 694 LDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNV 753
           LDI++F+SY ELR EL +MFG+EG+ EDP+RSGWQLVFVD+ENDVLLLGD PW  FV++V
Sbjct: 792 LDITKFTSYPELRSELARMFGLEGELEDPVRSGWQLVFVDQENDVLLLGDGPWPEFVNSV 851

Query: 754 WYIKILSPEDVQKMGEQGVESFSPSSGQRANSRGNC--------GRDPVGSLEY 799
            YIKILSP++VQ+MG   +E  +    QR  S G C        G   VGSL Y
Sbjct: 852 GYIKILSPQEVQQMGNNELELLNSVPIQRL-SNGVCEDPRNLSTGITTVGSLNY 904


>gi|242086258|ref|XP_002443554.1| hypothetical protein SORBIDRAFT_08g021460 [Sorghum bicolor]
 gi|241944247|gb|EES17392.1| hypothetical protein SORBIDRAFT_08g021460 [Sorghum bicolor]
          Length = 895

 Score =  717 bits (1851), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/468 (77%), Positives = 396/468 (84%), Gaps = 12/468 (2%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ +CLNSELWHACAGPLVSLP VG+RVVYFPQGHSEQVAA+TNKEVD+ IPNYPNLPPQ
Sbjct: 17  GEQRCLNSELWHACAGPLVSLPVVGSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQ 76

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           LICQLHNVTMHAD ET+EVYAQMTLQPLSPEEQK+ F+PIELG  SKQPTNYFCKTLTAS
Sbjct: 77  LICQLHNVTMHADAETEEVYAQMTLQPLSPEEQKEPFLPIELGAGSKQPTNYFCKTLTAS 136

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSVPRRAAEKVFP LDFS QPP QEL+ARDLHD EWKFRHIFRGQPKRHLLTT
Sbjct: 137 DTSTHGGFSVPRRAAEKVFPPLDFSQQPPVQELVARDLHDNEWKFRHIFRGQPKRHLLTT 196

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWSVFVSAKRLVAGDS++FIWN+ NQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAAA
Sbjct: 197 GWSVFVSAKRLVAGDSIIFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAA 256

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 302
           HAAATNS FT+F+NPRASPSEFVIPL KYVKAV+HTRVSVGMRFRMLFETEESSVRRYMG
Sbjct: 257 HAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMG 316

Query: 303 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 362
           TITGISDLD  RW NSHWRSVKVGWDESTAG++QPRVSLWEIEPLTTFPMYP+ FPLRLK
Sbjct: 317 TITGISDLDSERWPNSHWRSVKVGWDESTAGDKQPRVSLWEIEPLTTFPMYPTAFPLRLK 376

Query: 363 RPWHPSTSSFNDNR-DETA--SGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLG 419
           RPW      FN  R DE A  S L WLR   G +G  +LNFQ LG  PW+Q R++   +G
Sbjct: 377 RPWASGLPMFNGGRSDEFARYSSLMWLR--DGNRGAQSLNFQGLGASPWLQPRIDYPLMG 434

Query: 420 NDHNQQYQAMLAAGMQ---SGDPVRQQFMQLQQPFQYLQQ-SGSQNPL 463
              +  YQ M AA ++   +GD ++Q    L  P Q  Q  +G  +PL
Sbjct: 435 LKPD-TYQQMAAAALEEIRAGDHLKQTSSLL--PVQQTQNLNGGLDPL 479


>gi|47496696|dbj|BAD19063.1| auxin response factor 3 [Cucumis sativus]
          Length = 916

 Score =  717 bits (1850), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 359/459 (78%), Positives = 395/459 (86%), Gaps = 8/459 (1%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ + LNSELWHACAGPLVSLP VG+RVVYFPQGHSEQVA +TN+EVD+HIP+YP+LPPQ
Sbjct: 15  GERRVLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAISTNREVDAHIPSYPSLPPQ 74

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           LICQLHNVTMHAD+ETDEVYAQMTLQPL+ +EQK+ ++P ELG PSKQPTNYFCKTLTAS
Sbjct: 75  LICQLHNVTMHADIETDEVYAQMTLQPLTAQEQKEPYLPAELGAPSKQPTNYFCKTLTAS 134

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSVPRRAAEKVFP LDFS QPPAQELIARDLHD EWKFRHIFRGQPKRHLLTT
Sbjct: 135 DTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTT 194

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWSVFVSAKRLVAGDSV+FIWNEKNQLLLGIRRA RP TVMPSSVLSSDSMH+GLLAAAA
Sbjct: 195 GWSVFVSAKRLVAGDSVIFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAA 254

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 302
           HAAATNS FT+F+NPRASPSEF+IPL KYVKAV+HTRVSVGMRFRMLFETEESSVRRYMG
Sbjct: 255 HAAATNSRFTIFYNPRASPSEFIIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMG 314

Query: 303 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 362
           TITGISDLD  RW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS FPLRLK
Sbjct: 315 TITGISDLDSTRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLK 374

Query: 363 RPWHPSTSSFNDNRDETA---SGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLG 419
           RPW     SF+  +++     S L WLRG   ++G+  LNF  +G+ PWMQ R++ S +G
Sbjct: 375 RPWPTGFPSFHGLKEDDLGLNSQLMWLRGDGLDRGIQPLNFPGIGVAPWMQPRLDASMVG 434

Query: 420 NDHNQQYQAMLAAGMQ---SGDPVRQQFMQLQQPFQYLQ 455
               + YQAM AA +Q   + DP + Q   L Q FQ  Q
Sbjct: 435 -LQPEIYQAMAAAALQEMRTVDPAKAQAASLLQ-FQQTQ 471


>gi|449518891|ref|XP_004166469.1| PREDICTED: auxin response factor 6-like [Cucumis sativus]
          Length = 916

 Score =  717 bits (1850), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 359/459 (78%), Positives = 395/459 (86%), Gaps = 8/459 (1%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ + LNSELWHACAGPLVSLP VG+RVVYFPQGHSEQVA +TN+EVD+HIP+YP+LPPQ
Sbjct: 15  GERRVLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAISTNREVDAHIPSYPSLPPQ 74

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           LICQLHNVTMHAD+ETDEVYAQMTLQPL+ +EQK+ ++P ELG PSKQPTNYFCKTLTAS
Sbjct: 75  LICQLHNVTMHADIETDEVYAQMTLQPLTAQEQKEPYLPAELGAPSKQPTNYFCKTLTAS 134

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSVPRRAAEKVFP LDFS QPPAQELIARDLHD EWKFRHIFRGQPKRHLLTT
Sbjct: 135 DTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTT 194

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWSVFVSAKRLVAGDSV+FIWNEKNQLLLGIRRA RP TVMPSSVLSSDSMH+GLLAAAA
Sbjct: 195 GWSVFVSAKRLVAGDSVIFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAA 254

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 302
           HAAATNS FT+F+NPRASPSEF+IPL KYVKAV+HTRVSVGMRFRMLFETEESSVRRYMG
Sbjct: 255 HAAATNSRFTIFYNPRASPSEFIIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMG 314

Query: 303 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 362
           TITGISDLD  RW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS FPLRLK
Sbjct: 315 TITGISDLDSTRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLK 374

Query: 363 RPWHPSTSSFNDNRDETA---SGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLG 419
           RPW     SF+  +++     S L WLRG   ++G+  LNF  +G+ PWMQ R++ S +G
Sbjct: 375 RPWPTGFPSFHGLKEDDLGLNSQLMWLRGDGLDRGIQPLNFPGIGVAPWMQPRLDASMVG 434

Query: 420 NDHNQQYQAMLAAGMQ---SGDPVRQQFMQLQQPFQYLQ 455
               + YQAM AA +Q   + DP + Q   L Q FQ  Q
Sbjct: 435 -LQPEIYQAMAAAALQEMRTVDPAKAQAASLLQ-FQQTQ 471


>gi|326517318|dbj|BAK00026.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 891

 Score =  716 bits (1848), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/463 (77%), Positives = 392/463 (84%), Gaps = 18/463 (3%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ +CLNSELWHACAGPLVSLP VG+RV+YFPQGHSEQVAA+TNKEVD+ IPNYPNLPPQ
Sbjct: 19  GEQRCLNSELWHACAGPLVSLPAVGSRVIYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQ 78

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           LICQLHNVTMHAD ETDEVYAQMTLQPLSPEEQK+ F+PIELG  SKQPTNYFCKTLTAS
Sbjct: 79  LICQLHNVTMHADAETDEVYAQMTLQPLSPEEQKEPFLPIELGAASKQPTNYFCKTLTAS 138

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSVPRR+AEKVFP LDFSLQPP QELIA+DLHD EWKFRHIFRGQPKRHLLTT
Sbjct: 139 DTSTHGGFSVPRRSAEKVFPPLDFSLQPPCQELIAKDLHDNEWKFRHIFRGQPKRHLLTT 198

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWSVFVSAKRLVAGDSV+FIWN+ NQLLLGIR A RP TVMPSSVLSSDSMHIGLLAAAA
Sbjct: 199 GWSVFVSAKRLVAGDSVIFIWNDNNQLLLGIRHANRPQTVMPSSVLSSDSMHIGLLAAAA 258

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 302
           HAAATNS FT+F+NPRASPSEF+IPL KYVK+V+HTRVSVGMRFRMLFETEESSVRRYMG
Sbjct: 259 HAAATNSRFTIFYNPRASPSEFIIPLAKYVKSVYHTRVSVGMRFRMLFETEESSVRRYMG 318

Query: 303 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 362
           TIT ISDLD  RW NSHWRSVKVGWDESTAGE+QPRVSLWEIEPLTTFPMYP+ FPLRLK
Sbjct: 319 TITTISDLDSARWPNSHWRSVKVGWDESTAGEKQPRVSLWEIEPLTTFPMYPTAFPLRLK 378

Query: 363 RPWHPSTSS----FNDNRDET---ASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEP 415
           RPW     S    FN  +++     S L WL  G G++G  +LNFQ +G  PW+Q R++ 
Sbjct: 379 RPWASGMPSMHGMFNGVKNDDFARYSSLMWL--GDGDRGAQSLNFQGVGASPWLQPRIDS 436

Query: 416 SFLGNDHNQQYQAMLAAGMQ---SGDPVRQ-----QFMQLQQP 450
             LG   +  YQ M AA ++   +GDP +Q     QF Q Q P
Sbjct: 437 PLLGLKPD-TYQQMAAAALEEIRTGDPSKQSSALLQFQQTQNP 478



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 93/220 (42%), Positives = 126/220 (57%), Gaps = 24/220 (10%)

Query: 573 SKYEPSQVRDFVHSMS---LPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTT 629
           S  + S V+ +V ++    L SS+  +D   G    ++    S+   + +  SG  LP  
Sbjct: 669 SARDSSSVQAYVANVDNHFLSSSFAFQDGMAGARGGSSSGTVSMAIPL-LRYSGEDLPPA 727

Query: 630 VSSFTTSVDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGS 689
            +  T+S         LG+SG  NS           L N+  +D  +    FVKV KSGS
Sbjct: 728 DTLATSSC--------LGESGTFNS-----------LDNMCGVDP-SQDGIFVKVCKSGS 767

Query: 690 VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAF 749
            GRSLDI++FSSY ELR EL  +FG+EG+ EDP+RSGWQLVFVDREND+LL+GDDPW+ F
Sbjct: 768 PGRSLDITKFSSYYELRSELEHLFGLEGQLEDPVRSGWQLVFVDRENDILLVGDDPWQEF 827

Query: 750 VSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANSRGNC 789
           V++V  IKILSP++VQ+M   G    S + G R      C
Sbjct: 828 VNSVGCIKILSPQEVQRMVRGGEGLLSSAPGARMAQGDVC 867


>gi|242096722|ref|XP_002438851.1| hypothetical protein SORBIDRAFT_10g027220 [Sorghum bicolor]
 gi|241917074|gb|EER90218.1| hypothetical protein SORBIDRAFT_10g027220 [Sorghum bicolor]
          Length = 919

 Score =  716 bits (1848), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/454 (78%), Positives = 387/454 (85%), Gaps = 9/454 (1%)

Query: 2   IGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 61
           + ++KCLNSELWHACAGPLVSLP VG+RVVYFPQGHSEQVAA+TNKE++S IPNYPNLPP
Sbjct: 22  VEEHKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLPP 81

Query: 62  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTA 121
           QLICQLHNVTMHAD ETDEVYAQMTLQPL+P+E KD ++P ELG  +KQPTNYFCKTLTA
Sbjct: 82  QLICQLHNVTMHADAETDEVYAQMTLQPLNPQELKDPYLPAELGSANKQPTNYFCKTLTA 141

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAEKVFP LDF+ QPP QEL+A+DLH  EWKFRHIFRGQPKRHLLT
Sbjct: 142 SDTSTHGGFSVPRRAAEKVFPPLDFTQQPPCQELMAKDLHGNEWKFRHIFRGQPKRHLLT 201

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWSVFVSAKRLVAGDSVLFIWN+ NQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAA
Sbjct: 202 TGWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAA 261

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           AHAA+TNS FT+F+NPRASPSEFVIPL KYVKAV+HTR+SVGMRFRMLFETEESSVRRYM
Sbjct: 262 AHAASTNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVRRYM 321

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRL 361
           GTITGISDLD VRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS FPLRL
Sbjct: 322 GTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRL 381

Query: 362 KRPWHPSTSSFNDNRDET-ASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGN 420
           KRPW     S +  +D+  A+ L WLR      G  +LNF  LGM PWMQ R++ S LG 
Sbjct: 382 KRPWPTGLPSLHGGKDDDLANSLMWLRDA-ANPGFQSLNFGGLGMNPWMQPRLDASLLGL 440

Query: 421 DHNQQYQAMLAAGMQSGDPVRQ----QFMQLQQP 450
             +  YQAM  A  Q  DP +Q      +Q QQP
Sbjct: 441 QPD-MYQAMATAAFQ--DPTKQVSSPTMLQFQQP 471



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 102/197 (51%), Positives = 132/197 (67%), Gaps = 17/197 (8%)

Query: 603 ENCNTDSQNSVVFGVHIDSSGLLL-----------PTTVSSFTTS--VDPGVSSMPLGDS 649
           ++ N+D QN V+FGV IDS  LL+            +T   ++TS  + P  +  PL D 
Sbjct: 700 QDVNSDPQNHVLFGVSIDSQSLLMQGGIPGLQNGNDSTAIPYSTSNFLSPSQNDFPL-DH 758

Query: 650 GFHNSMYGCMQDSSELLHNVGQIDQLT-PTRTFVKVYKSGSVGRSLDISRFSSYNELREE 708
             ++   GC+ DS  +       DQ+  P  TFVKVYKSG+ GRSLDI+RFSSY+ELR E
Sbjct: 759 TLNSP--GCLDDSGYVPPCSDNSDQVNRPPATFVKVYKSGTYGRSLDITRFSSYHELRRE 816

Query: 709 LGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMG 768
           LG++FG+EG+ EDPLRSGWQLVFVDRE DVLL+GDDPW+ FVS V  IKILSP++VQ+MG
Sbjct: 817 LGRLFGLEGQLEDPLRSGWQLVFVDREEDVLLVGDDPWQEFVSTVSCIKILSPQEVQQMG 876

Query: 769 EQGVESFSPSSGQRANS 785
           +QG+E  S    +R  S
Sbjct: 877 KQGLELLSSGPARRLGS 893


>gi|158512939|sp|A2YG67.1|ARFQ_ORYSI RecName: Full=Auxin response factor 17
 gi|125556472|gb|EAZ02078.1| hypothetical protein OsI_24158 [Oryza sativa Indica Group]
          Length = 917

 Score =  715 bits (1845), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/453 (78%), Positives = 385/453 (84%), Gaps = 8/453 (1%)

Query: 2   IGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 61
           + + KCLNSELWHACAGPLVSLP VG+RVVYFPQGHSEQVAA+TNKE++S IPNYPNLPP
Sbjct: 21  VEEQKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLPP 80

Query: 62  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTA 121
           QLICQLHNVTMHAD ETDEVYAQMTLQPLSP+E KD ++P ELG  +KQPTNYFCKTLTA
Sbjct: 81  QLICQLHNVTMHADAETDEVYAQMTLQPLSPQELKDPYLPAELGSANKQPTNYFCKTLTA 140

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAEKVFP LDF+ QPPAQELIA+DLH  EWKFRHIFRGQPKRHLLT
Sbjct: 141 SDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELIAKDLHGNEWKFRHIFRGQPKRHLLT 200

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWSVFVSAKRLVAGDSVLFIWN+ NQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAA
Sbjct: 201 TGWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAA 260

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           AHAA+TNS FT+F+NPRASPSEFVIPL+KYVKAV+HTR+SVGMRFRMLFETEESSVRRYM
Sbjct: 261 AHAASTNSRFTIFYNPRASPSEFVIPLSKYVKAVYHTRISVGMRFRMLFETEESSVRRYM 320

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRL 361
           GTITGISDLD  RW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS FPLRL
Sbjct: 321 GTITGISDLDAARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRL 380

Query: 362 KRPWHPSTSSFNDNRDET-ASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGN 420
           KRPW     S +  +D+   S L WLR  +   G  +LNF  LGM PWMQ R + S LG 
Sbjct: 381 KRPWPTGLPSLHGGKDDDLTSSLMWLR-DSANPGFQSLNFGGLGMNPWMQPRFDASLLGL 439

Query: 421 DHNQQYQAMLAAGMQSGDPVRQ---QFMQLQQP 450
             +  YQ + A   Q  DP +Q     +Q QQP
Sbjct: 440 QPD-MYQTIAATAFQ--DPTKQVSPTILQFQQP 469


>gi|115469522|ref|NP_001058360.1| Os06g0677800 [Oryza sativa Japonica Group]
 gi|75253264|sp|Q653U3.1|ARFQ_ORYSJ RecName: Full=Auxin response factor 17
 gi|52076626|dbj|BAD45527.1| putative auxin response factor [Oryza sativa Japonica Group]
 gi|52076912|dbj|BAD45924.1| putative auxin response factor [Oryza sativa Japonica Group]
 gi|113596400|dbj|BAF20274.1| Os06g0677800 [Oryza sativa Japonica Group]
          Length = 917

 Score =  715 bits (1845), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/453 (78%), Positives = 385/453 (84%), Gaps = 8/453 (1%)

Query: 2   IGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 61
           + + KCLNSELWHACAGPLVSLP VG+RVVYFPQGHSEQVAA+TNKE++S IPNYPNLPP
Sbjct: 21  VEEQKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLPP 80

Query: 62  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTA 121
           QLICQLHNVTMHAD ETDEVYAQMTLQPLSP+E KD ++P ELG  +KQPTNYFCKTLTA
Sbjct: 81  QLICQLHNVTMHADAETDEVYAQMTLQPLSPQELKDPYLPAELGSANKQPTNYFCKTLTA 140

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAEKVFP LDF+ QPPAQELIA+DLH  EWKFRHIFRGQPKRHLLT
Sbjct: 141 SDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELIAKDLHGNEWKFRHIFRGQPKRHLLT 200

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWSVFVSAKRLVAGDSVLFIWN+ NQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAA
Sbjct: 201 TGWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAA 260

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           AHAA+TNS FT+F+NPRASPSEFVIPL+KYVKAV+HTR+SVGMRFRMLFETEESSVRRYM
Sbjct: 261 AHAASTNSRFTIFYNPRASPSEFVIPLSKYVKAVYHTRISVGMRFRMLFETEESSVRRYM 320

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRL 361
           GTITGISDLD  RW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS FPLRL
Sbjct: 321 GTITGISDLDAARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRL 380

Query: 362 KRPWHPSTSSFNDNRDET-ASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGN 420
           KRPW     S +  +D+   S L WLR  +   G  +LNF  LGM PWMQ R + S LG 
Sbjct: 381 KRPWPTGLPSLHGGKDDDLTSSLMWLR-DSANPGFQSLNFGGLGMNPWMQPRFDASLLGL 439

Query: 421 DHNQQYQAMLAAGMQSGDPVRQ---QFMQLQQP 450
             +  YQ + A   Q  DP +Q     +Q QQP
Sbjct: 440 QPD-MYQTIAATAFQ--DPTKQVSPTILQFQQP 469


>gi|125598233|gb|EAZ38013.1| hypothetical protein OsJ_22358 [Oryza sativa Japonica Group]
          Length = 904

 Score =  715 bits (1845), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/453 (78%), Positives = 385/453 (84%), Gaps = 8/453 (1%)

Query: 2   IGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 61
           + + KCLNSELWHACAGPLVSLP VG+RVVYFPQGHSEQVAA+TNKE++S IPNYPNLPP
Sbjct: 21  VEEQKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLPP 80

Query: 62  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTA 121
           QLICQLHNVTMHAD ETDEVYAQMTLQPLSP+E KD ++P ELG  +KQPTNYFCKTLTA
Sbjct: 81  QLICQLHNVTMHADAETDEVYAQMTLQPLSPQELKDPYLPAELGSANKQPTNYFCKTLTA 140

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAEKVFP LDF+ QPPAQELIA+DLH  EWKFRHIFRGQPKRHLLT
Sbjct: 141 SDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELIAKDLHGNEWKFRHIFRGQPKRHLLT 200

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWSVFVSAKRLVAGDSVLFIWN+ NQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAA
Sbjct: 201 TGWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAA 260

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           AHAA+TNS FT+F+NPRASPSEFVIPL+KYVKAV+HTR+SVGMRFRMLFETEESSVRRYM
Sbjct: 261 AHAASTNSRFTIFYNPRASPSEFVIPLSKYVKAVYHTRISVGMRFRMLFETEESSVRRYM 320

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRL 361
           GTITGISDLD  RW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS FPLRL
Sbjct: 321 GTITGISDLDAARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRL 380

Query: 362 KRPWHPSTSSFNDNRDET-ASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGN 420
           KRPW     S +  +D+   S L WLR  +   G  +LNF  LGM PWMQ R + S LG 
Sbjct: 381 KRPWPTGLPSLHGGKDDDLTSSLMWLR-DSANPGFQSLNFGGLGMNPWMQPRFDASLLGL 439

Query: 421 DHNQQYQAMLAAGMQSGDPVRQ---QFMQLQQP 450
             +  YQ + A   Q  DP +Q     +Q QQP
Sbjct: 440 QPD-MYQTIAATAFQ--DPTKQVSPTILQFQQP 469


>gi|295844310|gb|ADG43152.1| auxin response factor 18 [Zea mays]
          Length = 913

 Score =  714 bits (1843), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/453 (78%), Positives = 386/453 (85%), Gaps = 8/453 (1%)

Query: 2   IGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 61
           + ++KCLNSELWHACAGPLVSLP VG+RVVYFPQGHSEQVAA+TNKE++S IPNYPNLPP
Sbjct: 21  VEEHKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEIESQIPNYPNLPP 80

Query: 62  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTA 121
           QLICQLHNVTMHAD ETDEVYAQMTLQPL+P+E KD ++P ELG  +KQPTNYFCKTLTA
Sbjct: 81  QLICQLHNVTMHADAETDEVYAQMTLQPLNPQELKDPYLPAELGSANKQPTNYFCKTLTA 140

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAEKVFP LDF+ QPP QEL+A+DLH  EWKFRHIFRGQPKRHLLT
Sbjct: 141 SDTSTHGGFSVPRRAAEKVFPPLDFTQQPPCQELMAKDLHGNEWKFRHIFRGQPKRHLLT 200

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWSVFVSAKRLVAGDSVLFIWN+ NQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAA
Sbjct: 201 TGWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAA 260

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           AHAA+TNS FT+F+NPRASPSEFVIPL KYVKAV+HTR+SVGMRFRMLFETEESSVRRYM
Sbjct: 261 AHAASTNSRFTIFYNPRASPSEFVIPLVKYVKAVYHTRISVGMRFRMLFETEESSVRRYM 320

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRL 361
           GTITGI DLD VRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS FPLRL
Sbjct: 321 GTITGICDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRL 380

Query: 362 KRPWHPSTSSFNDNRDET-ASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGN 420
           KRPW     S +  +D+  A+ L WLR  T   G  +LNF  LGM PWMQ R++ + LG 
Sbjct: 381 KRPWPTGLPSLHGGKDDDLANSLMWLR-DTANPGFQSLNFGGLGMSPWMQPRLDATLLGL 439

Query: 421 DHNQQYQAMLAAGMQSGDPVRQQ---FMQLQQP 450
             +  YQAM  A  Q  D  +Q     +Q QQP
Sbjct: 440 QPD-MYQAMATAAFQ--DATKQASPTMLQFQQP 469


>gi|118488187|gb|ABK95913.1| unknown [Populus trichocarpa]
          Length = 533

 Score =  713 bits (1840), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/533 (69%), Positives = 421/533 (78%), Gaps = 40/533 (7%)

Query: 284 MRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWE 343
           MRFRMLFETEESSVRRYMGTITGISDLDPVRW NSHWRSVKVGWDESTAGERQPRVSLWE
Sbjct: 1   MRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWE 60

Query: 344 IEPLTTFPMYPSLFPLRLKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSL 403
           IEPLTTFPMYPSLFPLRLKRPWHP + S  D+RDE ++GL WLRGG+GE GL +LNFQ+ 
Sbjct: 61  IEPLTTFPMYPSLFPLRLKRPWHPGSPSLLDSRDEASNGLMWLRGGSGEPGLPSLNFQA- 119

Query: 404 GMFPWMQQRVEPSFLGNDHNQQYQAMLAAGMQ---SGDPVRQQFMQLQQPFQYLQQSGSQ 460
            M PWMQQR++P+ LGNDHNQ+YQAMLAAGMQ   SGDP+RQQFMQLQQPFQYLQQS   
Sbjct: 120 NMLPWMQQRLDPTMLGNDHNQRYQAMLAAGMQNLGSGDPLRQQFMQLQQPFQYLQQSSGH 179

Query: 461 NP---------------------LQLKQQ-------QHLLQQ-LNSQAEDRAQQQQQPQQ 491
           NP                     LQ + Q       +HLLQQ LN+Q  D+AQQ Q    
Sbjct: 180 NPLLQLQQQQQQQAIQQSIPHNILQAQNQISTESLPRHLLQQQLNNQPGDQAQQHQ---- 235

Query: 492 HMYHDALQIRTDELLQRQQSNLPSPSFSKANFMDSSTEISVSISPMQNMLGSL-PEGSGN 550
           H+YHD LQI+TD+L QRQQSNLPSPSFSK  +MDSS++ S + +PMQNMLGSL  EGS N
Sbjct: 236 HIYHDGLQIQTDQL-QRQQSNLPSPSFSKTEYMDSSSKFSATNTPMQNMLGSLCSEGSVN 294

Query: 551 LLNFSGAGPSMLRQQFPQQSLGSKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQ 610
           LL+FS AG S L +Q PQQS   KY   +V  F +S+SLP +Y  KD ++  ENC++D+Q
Sbjct: 295 LLDFSRAGQSTLTEQLPQQSWVPKYAHQEVNAFANSISLPRTYPEKDPSMEAENCSSDAQ 354

Query: 611 NSVVFGVHIDSSGLLLPTTVSSFTTS-VDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNV 669
           N  +FG +IDSSGLLLPTTV  ++TS +D  VSSMPLGDSGF NS+YGC+QDSSELL N 
Sbjct: 355 NPTLFGANIDSSGLLLPTTVPRYSTSSIDADVSSMPLGDSGFQNSLYGCVQDSSELLSNA 414

Query: 670 GQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQL 729
           GQ+D  TP+ TFVKVYKSGSVGRSLDISRFSSY+ELR EL QMFGIEGK E+P RSGWQL
Sbjct: 415 GQMDPPTPSGTFVKVYKSGSVGRSLDISRFSSYHELRGELAQMFGIEGKLENPHRSGWQL 474

Query: 730 VFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQR 782
           VFVDRENDVLLLGDDPWE FV+NVWYIKILSPEDV K+GEQGVE   P++  R
Sbjct: 475 VFVDRENDVLLLGDDPWELFVNNVWYIKILSPEDVLKLGEQGVEPSGPNAVHR 527


>gi|47496698|dbj|BAD19064.1| auxin response factor 4 [Cucumis sativus]
          Length = 816

 Score =  712 bits (1837), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 433/824 (52%), Positives = 511/824 (62%), Gaps = 104/824 (12%)

Query: 72  MHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTHGGFS 131
           MHAD ETDEVYAQMTLQPLS +E K+ ++P ELG PS+QPTNYFCKTLTASDTSTHGGFS
Sbjct: 1   MHADAETDEVYAQMTLQPLSAQELKEAYLPAELGTPSRQPTNYFCKTLTASDTSTHGGFS 60

Query: 132 VPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAK 191
           VPRRAAEKVFP LDFS+QPPAQELIARDLHD EWKFRHIFRGQPKRHLLTTGWSVFVSAK
Sbjct: 61  VPRRAAEKVFPPLDFSMQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAK 120

Query: 192 RLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAATNSCF 251
           RLVAGD+VLFIWNEKNQLLLGIRRA RP TVMPSSVLSSDSMH+GLLAAAAHAAAT S F
Sbjct: 121 RLVAGDAVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHLGLLAAAAHAAATISRF 180

Query: 252 TVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLD 311
           T+FFNPRASPSEFVIPL KYVKAV+HTRVSVGMRFRMLFETE             +    
Sbjct: 181 TIFFNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETENQVFVATWAQSLALVTWI 240

Query: 312 PVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWHPSTSS 371
           PVRW NSHWRSVKVGWDESTAGERQP+VSLWEIEPLTTFPMYPS FPLRLKRPW     S
Sbjct: 241 PVRWQNSHWRSVKVGWDESTAGERQPKVSLWEIEPLTTFPMYPSPFPLRLKRPWPTGLPS 300

Query: 372 F--NDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGNDHNQQYQAM 429
           F   D+     S   WLRG   ++G+  LNFQ  G+ PWMQ R++PS +G   +  YQ M
Sbjct: 301 FGIKDSDLGMNSPFMWLRGDNSDRGIQCLNFQGAGVSPWMQPRLDPSMMGM-QSDMYQVM 359

Query: 430 LAAGMQSGDPVR------QQFMQLQQPF------------QYLQQSGSQNP-LQLKQQQH 470
             A +Q    +          +Q QQP             Q L QS  Q   LQ  Q+  
Sbjct: 360 ATAALQEMRAIDYSKISPASVLQFQQPQSLPCQSSTLMQPQMLHQSQPQQAFLQSVQENQ 419

Query: 471 LLQQLNSQAEDRAQQQQQPQQHMYH---------------DALQIRT-----DELLQRQQ 510
              Q  SQ +    Q Q PQQ   +               D  QI +      +     Q
Sbjct: 420 QHSQPQSQTQSHHLQPQLPQQSFNNHSQQHQQQPRQNQPLDHQQIPSSIPAISQFASCSQ 479

Query: 511 SNLPS----------PSFSKANFMDSSTEISVSISPMQNMLGSLPEGS-GNLLNF----- 554
           S  PS          PSFS +N    +   S ++SP+ ++ GS  +     LLN      
Sbjct: 480 SQSPSLQTVPSLCQQPSFSDSN---GNPATSPTVSPLHSLAGSFVQDDFSQLLNLQRAHS 536

Query: 555 ---SGAGPSMLRQQFPQQSLGSKYEPSQVRDF--------VHSMSLPSSYNGKDAAVGTE 603
              S   PS      P  +  S+Y   QV            ++++LP  + G++  +   
Sbjct: 537 VIPSAGWPSKRAAIDPLCTGASQYFLPQVEMLGTQQSSISQNTVALP-PFPGRECPIDDR 595

Query: 604 NCNTDSQNSVVFGVHIDSSGLLLPTTVSSFTTSVDPGVSSMPLGDSGFHNSM-------- 655
             ++D QN V+FG +IDSS LL+   +S+     +  VS+     S + ++         
Sbjct: 596 EESSDPQNHVLFGANIDSSSLLMQNGMSTLRGVCNDSVSTTLPFSSNYMSTAGTNFPVNP 655

Query: 656 ----YGCMQDSSELLH---NVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREE 708
                 C+ D S LL    NVGQ++   P  TFVKV+KSG+  RSLDI++F+SY ELR E
Sbjct: 656 TMTSSNCI-DESGLLQSHENVGQVN--PPNGTFVKVHKSGTYSRSLDITKFNSYPELRSE 712

Query: 709 LGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMG 768
           L +MFG+EG+ EDPLRSGWQLVFVDRENDVLLLGD PW  FV++VW IKILSPE+VQ MG
Sbjct: 713 LARMFGLEGELEDPLRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPEEVQDMG 772

Query: 769 EQGVE------------SFSPSSGQRANSRG-NCGRDPVGSLEY 799
           ++G+E            S     G R +SR    G   VG L+Y
Sbjct: 773 KRGLELLNSVPIQRLSNSTCDDYGSRQDSRNLISGIASVGPLDY 816


>gi|115489558|ref|NP_001067266.1| Os12g0613700 [Oryza sativa Japonica Group]
 gi|122203162|sp|Q2QM84.1|ARFY_ORYSJ RecName: Full=Auxin response factor 25; AltName: Full=OsARF6b
 gi|77556604|gb|ABA99400.1| Auxin response factor 6, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113649773|dbj|BAF30285.1| Os12g0613700 [Oryza sativa Japonica Group]
 gi|125580063|gb|EAZ21209.1| hypothetical protein OsJ_36859 [Oryza sativa Japonica Group]
          Length = 899

 Score =  711 bits (1835), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/494 (74%), Positives = 398/494 (80%), Gaps = 29/494 (5%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ +CLNSELWHACAGPLVSLP V +RVVYFPQGHSEQVAA+TNKEVD+ IPNYPNLPPQ
Sbjct: 20  GEQRCLNSELWHACAGPLVSLPVVRSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQ 79

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           LICQLHNVTMHAD ETDEVYAQMTLQPLSPEEQK+ F+P+ELG  SKQPTNYFCKTLTAS
Sbjct: 80  LICQLHNVTMHADAETDEVYAQMTLQPLSPEEQKEPFLPMELGAASKQPTNYFCKTLTAS 139

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSVPRRAAEKVFP LDFS QPPAQELIARDLHD EWKFRHIFRGQPKRHLLTT
Sbjct: 140 DTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTT 199

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWSVFVSAKRLVAGDSV+FIWN+ NQLLLGIRRA R  TVMPSSVLSSDSMHIGLLAAAA
Sbjct: 200 GWSVFVSAKRLVAGDSVIFIWNDNNQLLLGIRRANRQQTVMPSSVLSSDSMHIGLLAAAA 259

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 302
           HAAATNS FT+F+NPRASPSEFVIPL KYVKAV+HTRVSVGMRFRMLFETEESSVRRYMG
Sbjct: 260 HAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMG 319

Query: 303 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 362
           TIT ISDLD VRW NSHWRSVKVGWDEST G++QPRVSLWEIEPLTTFPMYPS FPLRLK
Sbjct: 320 TITSISDLDSVRWPNSHWRSVKVGWDESTTGDKQPRVSLWEIEPLTTFPMYPSAFPLRLK 379

Query: 363 RPWH---PSTSSFN-DNRDETA--SGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPS 416
           RPW    P    FN    D+ A  S L WLR G   +G  +LNFQ  G+ PW+Q R++  
Sbjct: 380 RPWASGLPMHGMFNGGGNDDFARYSSLMWLRDGN--RGTQSLNFQGHGVSPWLQPRIDSP 437

Query: 417 FLGNDHNQQYQAMLAAGMQS---GDPVRQQFMQLQQPFQYLQQSG--------------- 458
            LG   +  YQ M AA ++    GDP +Q    LQ    +   SG               
Sbjct: 438 LLGLKPD-TYQQMAAAALEEIRYGDPSKQHPATLQYQQTHNLNSGLNSLFASHVLGQVQF 496

Query: 459 --SQNPLQLKQQQH 470
              Q+PLQ+ QQ H
Sbjct: 497 QPQQSPLQVVQQGH 510



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 87/201 (43%), Positives = 124/201 (61%), Gaps = 24/201 (11%)

Query: 602 TENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFTTSVDPGVSSMPL-------GDSGFHNS 654
            ++C  D++N ++      SS   L   ++S  T  +    +M +        D    N+
Sbjct: 686 VQDCRADAENRLL------SSSFELQDGMTSIITDANRETDTMAIPLLRYSGADLTTENT 739

Query: 655 MY--GCMQDSSEL--LHNVGQIDQLTPTR--TFVKVYKSGSVGRSLDISRFSSYNELREE 708
           +    C+ +S     L+N+     + P++  TFVKVYKSGS+GRSLDISRFSSY ELR E
Sbjct: 740 LATSNCLGESGTFNPLNNIS----VNPSQGATFVKVYKSGSLGRSLDISRFSSYCELRSE 795

Query: 709 LGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMG 768
           L ++FG+EG+ EDP+RSGWQLVFVDREND+LL+GDDPW+ F ++VW IKILSP++VQ++ 
Sbjct: 796 LERLFGLEGQLEDPVRSGWQLVFVDRENDILLVGDDPWQEFANSVWCIKILSPQEVQQL- 854

Query: 769 EQGVESFSPSSGQRANSRGNC 789
            +G +    S G R      C
Sbjct: 855 VRGGDGLLSSPGARMQQSNAC 875


>gi|125537393|gb|EAY83881.1| hypothetical protein OsI_39101 [Oryza sativa Indica Group]
          Length = 899

 Score =  711 bits (1834), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/494 (74%), Positives = 398/494 (80%), Gaps = 29/494 (5%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ +CLNSELWHACAGPLVSLP V +RVVYFPQGHSEQVAA+TNKEVD+ IPNYPNLPPQ
Sbjct: 20  GEQRCLNSELWHACAGPLVSLPVVRSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQ 79

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           LICQLHNVTMHAD ETDEVYAQMTLQPLSPEEQK+ F+P+ELG  SKQPTNYFCKTLTAS
Sbjct: 80  LICQLHNVTMHADAETDEVYAQMTLQPLSPEEQKEPFLPMELGAASKQPTNYFCKTLTAS 139

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSVPRRAAEKVFP LDFS QPPAQELIARDLHD EWKFRHIFRGQPKRHLLTT
Sbjct: 140 DTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTT 199

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWSVFVSAKRLVAGDSV+FIWN+ NQLLLGIRRA R  TVMPSSVLSSDSMHIGLLAAAA
Sbjct: 200 GWSVFVSAKRLVAGDSVIFIWNDNNQLLLGIRRANRQQTVMPSSVLSSDSMHIGLLAAAA 259

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 302
           HAAATNS FT+F+NPRASPSEFVIPL KYVKAV+HTRVSVGMRFRMLFETEESSVRRYMG
Sbjct: 260 HAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMG 319

Query: 303 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 362
           TIT ISDLD VRW NSHWRSVKVGWDEST G++QPRVSLWEIEPLTTFPMYPS FPLRLK
Sbjct: 320 TITSISDLDSVRWPNSHWRSVKVGWDESTTGDKQPRVSLWEIEPLTTFPMYPSAFPLRLK 379

Query: 363 RPWH---PSTSSFN-DNRDETA--SGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPS 416
           RPW    P    FN    D+ A  S L WLR G   +G  +LNFQ  G+ PW+Q R++  
Sbjct: 380 RPWASGLPMHGMFNGGGNDDFARYSSLMWLRDGN--RGTQSLNFQGHGVSPWLQPRIDSP 437

Query: 417 FLGNDHNQQYQAMLAAGMQS---GDPVRQQFMQLQQPFQYLQQSG--------------- 458
            LG   +  YQ M AA ++    GDP +Q    LQ    +   SG               
Sbjct: 438 LLGLKPD-TYQQMAAAALEEIRYGDPSKQHPATLQYQQTHNLNSGLNSLFASHVLGQVQF 496

Query: 459 --SQNPLQLKQQQH 470
              Q+PLQ+ QQ H
Sbjct: 497 QPQQSPLQVVQQGH 510



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 87/201 (43%), Positives = 124/201 (61%), Gaps = 24/201 (11%)

Query: 602 TENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFTTSVDPGVSSMPL-------GDSGFHNS 654
            ++C  D++N ++      SS   L   ++S  T  +    +M +        D    N+
Sbjct: 686 VQDCRADAENRLL------SSSFELQDGMTSIITDANRETDTMAIPLLRYSGADLTTENT 739

Query: 655 MY--GCMQDSSEL--LHNVGQIDQLTPTR--TFVKVYKSGSVGRSLDISRFSSYNELREE 708
           +    C+ +S     L+N+     + P++  TFVKVYKSGS+GRSLDISRFSSY ELR E
Sbjct: 740 LATSNCLGESGTFNPLNNIS----VNPSQGATFVKVYKSGSLGRSLDISRFSSYCELRSE 795

Query: 709 LGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMG 768
           L ++FG+EG+ EDP+RSGWQLVFVDREND+LL+GDDPW+ F ++VW IKILSP++VQ++ 
Sbjct: 796 LERLFGLEGQLEDPVRSGWQLVFVDRENDILLVGDDPWQEFANSVWCIKILSPQEVQQL- 854

Query: 769 EQGVESFSPSSGQRANSRGNC 789
            +G +    S G R      C
Sbjct: 855 VRGGDGLLSSPGARMQQSNAC 875


>gi|19352043|dbj|BAB85915.1| auxin response factor 6b [Oryza sativa]
          Length = 880

 Score =  711 bits (1834), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/494 (74%), Positives = 398/494 (80%), Gaps = 29/494 (5%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ +CLNSELWHACAGPLVSLP V +RVVYFPQGHSEQVAA+TNKEVD+ IPNYPNLPPQ
Sbjct: 1   GEQRCLNSELWHACAGPLVSLPVVRSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQ 60

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           LICQLHNVTMHAD ETDEVYAQMTLQPLSPEEQK+ F+P+ELG  SKQPTNYFCKTLTAS
Sbjct: 61  LICQLHNVTMHADAETDEVYAQMTLQPLSPEEQKEPFLPMELGAASKQPTNYFCKTLTAS 120

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSVPRRAAEKVFP LDFS QPPAQELIARDLHD EWKFRHIFRGQPKRHLLTT
Sbjct: 121 DTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTT 180

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWSVFVSAKRLVAGDSV+FIWN+ NQLLLGIRRA R  TVMPSSVLSSDSMHIGLLAAAA
Sbjct: 181 GWSVFVSAKRLVAGDSVIFIWNDNNQLLLGIRRANRQQTVMPSSVLSSDSMHIGLLAAAA 240

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 302
           HAAATNS FT+F+NPRASPSEFVIPL KYVKAV+HTRVSVGMRFRMLFETEESSVRRYMG
Sbjct: 241 HAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMG 300

Query: 303 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 362
           TIT ISDLD VRW NSHWRSVKVGWDEST G++QPRVSLWEIEPLTTFPMYPS FPLRLK
Sbjct: 301 TITSISDLDSVRWPNSHWRSVKVGWDESTTGDKQPRVSLWEIEPLTTFPMYPSAFPLRLK 360

Query: 363 RPWH---PSTSSFN-DNRDETA--SGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPS 416
           RPW    P    FN    D+ A  S L WLR G   +G  +LNFQ  G+ PW+Q R++  
Sbjct: 361 RPWASGLPMHGMFNGGGNDDFARYSSLMWLRDGN--RGTQSLNFQGHGVSPWLQPRIDSP 418

Query: 417 FLGNDHNQQYQAMLAAGMQS---GDPVRQQFMQLQQPFQYLQQSG--------------- 458
            LG   +  YQ M AA ++    GDP +Q    LQ    +   SG               
Sbjct: 419 LLGLKPD-TYQQMAAAALEEIRYGDPSKQHPATLQYQQTHNLNSGLNSLFASHVLGQVQF 477

Query: 459 --SQNPLQLKQQQH 470
              Q+PLQ+ QQ H
Sbjct: 478 QPQQSPLQVVQQGH 491



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 87/201 (43%), Positives = 124/201 (61%), Gaps = 24/201 (11%)

Query: 602 TENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFTTSVDPGVSSMPL-------GDSGFHNS 654
            ++C  D++N ++      SS   L   ++S  T  +    +M +        D    N+
Sbjct: 667 VQDCRADAENRLL------SSSFELQDGMTSIITDANRETDTMAIPLLRYSGADLTTENT 720

Query: 655 MY--GCMQDSSEL--LHNVGQIDQLTPTR--TFVKVYKSGSVGRSLDISRFSSYNELREE 708
           +    C+ +S     L+N+     + P++  TFVKVYKSGS+GRSLDISRFSSY ELR E
Sbjct: 721 LATSNCLGESGTFNPLNNIS----VNPSQGATFVKVYKSGSLGRSLDISRFSSYCELRSE 776

Query: 709 LGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMG 768
           L ++FG+EG+ EDP+RSGWQLVFVDREND+LL+GDDPW+ F ++VW IKILSP++VQ++ 
Sbjct: 777 LERLFGLEGQLEDPVRSGWQLVFVDRENDILLVGDDPWQEFANSVWCIKILSPQEVQQL- 835

Query: 769 EQGVESFSPSSGQRANSRGNC 789
            +G +    S G R      C
Sbjct: 836 VRGGDGLLSSPGARMQQSNAC 856


>gi|414878009|tpg|DAA55140.1| TPA: hypothetical protein ZEAMMB73_057592 [Zea mays]
          Length = 781

 Score =  708 bits (1828), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/469 (77%), Positives = 393/469 (83%), Gaps = 14/469 (2%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ +CLNSELWHACAGPLVSLP VG+RVVYFPQGHSEQVAA+TNKEVD+ IPNYPNLPPQ
Sbjct: 17  GEQRCLNSELWHACAGPLVSLPVVGSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQ 76

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           LICQLHNVTMHAD ET EVYAQMTLQPLSPEEQK+ F+PIELG  S QPTNYFCKTLTAS
Sbjct: 77  LICQLHNVTMHADAETGEVYAQMTLQPLSPEEQKEPFLPIELGAGSNQPTNYFCKTLTAS 136

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSVPRRAAEKVFP LDFS  PP QEL+ARDLHD EWKFRHIFRGQPKRHLLTT
Sbjct: 137 DTSTHGGFSVPRRAAEKVFPPLDFSQHPPVQELVARDLHDNEWKFRHIFRGQPKRHLLTT 196

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWSVFVSAKRLVAGDS++FIWN+ NQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAAA
Sbjct: 197 GWSVFVSAKRLVAGDSIIFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAA 256

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 302
           HAAATNS FT+F+NPRASPSEFVIPL KYVKAV+HTRVSVGMRFRMLFETEESSVRRYMG
Sbjct: 257 HAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMG 316

Query: 303 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 362
           TIT ISDLD  RW NSHWRSVKVGWDESTAG++QPRVSLWEIEPL  FPMYP+ FPLRLK
Sbjct: 317 TITCISDLDSERWPNSHWRSVKVGWDESTAGDKQPRVSLWEIEPLMAFPMYPTAFPLRLK 376

Query: 363 RPWHPSTSSFNDNR-DETA--SGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLG 419
           RPW      FN  R DE A  S L WLR   G +G  +LNFQ LG  PW+Q R++   LG
Sbjct: 377 RPWASGLPMFNGGRSDEFARYSSLMWLR--DGNRGAQSLNFQGLGASPWLQPRIDYPLLG 434

Query: 420 NDHNQQYQAMLAAGMQ---SGDPVRQ--QFMQLQQPFQYLQQSGSQNPL 463
              +  YQ M AA ++   +GD ++Q    + +QQP Q L  SG  +PL
Sbjct: 435 LKLD-TYQQMAAAALEEIRAGDHLKQISSLLPVQQP-QNL--SGGLDPL 479


>gi|242060620|ref|XP_002451599.1| hypothetical protein SORBIDRAFT_04g004430 [Sorghum bicolor]
 gi|241931430|gb|EES04575.1| hypothetical protein SORBIDRAFT_04g004430 [Sorghum bicolor]
          Length = 911

 Score =  703 bits (1815), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 352/457 (77%), Positives = 379/457 (82%), Gaps = 3/457 (0%)

Query: 4   DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQL 63
           ++KCLNSELWHACAGPLVSLP VG+RVVYFPQGH EQVAA+TNKE+++ IPNYP+LPPQL
Sbjct: 23  EHKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHGEQVAASTNKEMEAQIPNYPSLPPQL 82

Query: 64  ICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASD 123
           ICQLHNVTMHAD ETDEVYAQMTLQPLSP+E KD F+P ELG  SKQPTNYFCKTLTASD
Sbjct: 83  ICQLHNVTMHADAETDEVYAQMTLQPLSPQELKDPFLPAELGTASKQPTNYFCKTLTASD 142

Query: 124 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 183
           TSTHGGFSVPRRAAEKVFP LDF+ QPPAQELIA DLH  EWKFRHIFRGQPKRHLLTTG
Sbjct: 143 TSTHGGFSVPRRAAEKVFPPLDFNQQPPAQELIATDLHGNEWKFRHIFRGQPKRHLLTTG 202

Query: 184 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAH 243
           WSVFVSAKRLVAGDSVLFIWN+ NQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAAAH
Sbjct: 203 WSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAH 262

Query: 244 AAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGT 303
           AA+TNS FT+F+NPRASP EFVIP+ KYVKAV+HTR+SVGMRFRMLFETEESSVRRYMGT
Sbjct: 263 AASTNSRFTIFYNPRASPCEFVIPMAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGT 322

Query: 304 ITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKR 363
           ITGISDLDPVRW NSHWRSVKVGWDESTAGE+QPRVSLWEIEPLTTFPMYPS F L LKR
Sbjct: 323 ITGISDLDPVRWPNSHWRSVKVGWDESTAGEKQPRVSLWEIEPLTTFPMYPSPFALGLKR 382

Query: 364 PWHPSTSSFNDNRDE-TASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGNDH 422
           PW     S    RD+   S L WLR      G  +LNF  LG  PWMQ R++ S LG   
Sbjct: 383 PWPTGLPSLYGGRDDGLTSSLMWLR-DRANPGFQSLNFSGLGTSPWMQPRLDNSLLGLQS 441

Query: 423 NQQYQAMLAAGMQSGDP-VRQQFMQLQQPFQYLQQSG 458
           +       AA +QS    V    MQ QQP   + +S 
Sbjct: 442 DMYQTIAAAAALQSTTKQVSPSVMQFQQPQNIVDRSA 478


>gi|224056403|ref|XP_002298839.1| predicted protein [Populus trichocarpa]
 gi|222846097|gb|EEE83644.1| predicted protein [Populus trichocarpa]
          Length = 884

 Score =  702 bits (1812), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/457 (77%), Positives = 385/457 (84%), Gaps = 13/457 (2%)

Query: 4   DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQL 63
           + + LNSELWHACAGPLVSLP VG+R VYFPQGHSEQVAA+TNKEV++ IP+YP+LP QL
Sbjct: 16  EKRVLNSELWHACAGPLVSLPAVGSRAVYFPQGHSEQVAASTNKEVNAQIPSYPSLPAQL 75

Query: 64  ICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASD 123
           ICQLHNVTMHADVETDEVYAQMTLQPLSP+EQK  ++P ++G PSKQPTNYFCKTLTASD
Sbjct: 76  ICQLHNVTMHADVETDEVYAQMTLQPLSPQEQKAAYLPADMGTPSKQPTNYFCKTLTASD 135

Query: 124 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 183
           TSTHGGFSVPRRAAEKVFP LDFS  PPAQELIARDLHD EWKFRHIFRGQPKRHLLTTG
Sbjct: 136 TSTHGGFSVPRRAAEKVFPPLDFSQHPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTG 195

Query: 184 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAH 243
           WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSVLSSDSMH+GLLAAAAH
Sbjct: 196 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHLGLLAAAAH 255

Query: 244 AAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGT 303
           AAATNS FT+F+NPRASPSEFVIPL KY+KAV++TRVSVGMRFRM+FETEESSVRRYMGT
Sbjct: 256 AAATNSRFTIFYNPRASPSEFVIPLAKYLKAVYYTRVSVGMRFRMMFETEESSVRRYMGT 315

Query: 304 ITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKR 363
           ITGISDLD VRW NS WRSVKVGWDEST GERQPRVSLWEIEPLTTFP YPS FPLRLKR
Sbjct: 316 ITGISDLDVVRWPNSQWRSVKVGWDESTDGERQPRVSLWEIEPLTTFPTYPSPFPLRLKR 375

Query: 364 PWHPSTSSFN-----DNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFL 418
           PW P   SF+     D+       L WLRG  G+ G  +LNFQ  G+ PW+Q RV+ S L
Sbjct: 376 PWPPGLPSFHGLGIKDDDLGKNPSLMWLRGD-GDCGYQSLNFQGTGVSPWVQPRVDASML 434

Query: 419 GNDHNQQYQAMLAAG---MQSGDPVRQ---QFMQLQQ 449
           G   N  YQ M  A    M++ DP +     F+Q QQ
Sbjct: 435 GL-QNDVYQTMATAAFQEMRTLDPSKSSAASFLQFQQ 470


>gi|295844318|gb|ADG43156.1| auxin response factor 22 [Zea mays]
          Length = 925

 Score =  702 bits (1811), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 350/453 (77%), Positives = 383/453 (84%), Gaps = 8/453 (1%)

Query: 2   IGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 61
           + ++KCLNSELWHACAGPLVSLP VG+RVVYFPQGHSEQVAA+TNKE++S IP+YPNLPP
Sbjct: 35  VEEHKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPSYPNLPP 94

Query: 62  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTA 121
           QLICQLHNVTM AD ET+EVYAQMTLQPL+P+E KD ++P ELG+ SKQPTNYFCKTLTA
Sbjct: 95  QLICQLHNVTMQADAETEEVYAQMTLQPLNPQELKDPYLPAELGLVSKQPTNYFCKTLTA 154

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAEKVFP LDF+ QPP QEL+A DLH  EWKFRHIFRGQPKRHLLT
Sbjct: 155 SDTSTHGGFSVPRRAAEKVFPPLDFTQQPPCQELMATDLHGNEWKFRHIFRGQPKRHLLT 214

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWSVFVSAKRLVAGDSVLFIWN+ NQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAA
Sbjct: 215 TGWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAA 274

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           AHAA+TNS FT+F+NPRASPSEFVIPL KYVKAV+HTR+SVGMRFRMLFETEESSVRRYM
Sbjct: 275 AHAASTNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVRRYM 334

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRL 361
           GTITGISDLD VRW NSHWRSVKVGWDESTAG+RQPRVSLWEIEPLTTFP Y S FPLRL
Sbjct: 335 GTITGISDLDSVRWPNSHWRSVKVGWDESTAGDRQPRVSLWEIEPLTTFPTYTSPFPLRL 394

Query: 362 KRPWHPSTSSFNDNRDET-ASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGN 420
           KRPW     S +  +D+  A+ L WLR  T   G  +LNF  LGM  WMQ R++ S LG 
Sbjct: 395 KRPWPTGLPSLHGGKDDDLANSLMWLRDTTNP-GFQSLNFGGLGMNSWMQPRLDTSLLGL 453

Query: 421 DHNQQYQAMLAAGMQSGDPVRQQ---FMQLQQP 450
             +  YQAM     Q  DP +Q     +Q QQP
Sbjct: 454 QPD-MYQAMATGAFQ--DPTKQASPTMLQFQQP 483



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 100/194 (51%), Positives = 130/194 (67%), Gaps = 17/194 (8%)

Query: 603 ENCNTDSQNSVVFGVHIDSSGLLLP-----------TTVSSFTTS--VDPGVSSMPLGDS 649
           ++ N D QN ++FGV IDS  LL+            +T   ++TS  + P  +  PL D 
Sbjct: 705 QDANPDPQNHLLFGVSIDSQSLLMEGGIHGLQNGNDSTAIPYSTSNFLSPSQNDFPL-DH 763

Query: 650 GFHNSMYGCMQDSSELLHNVGQIDQLT-PTRTFVKVYKSGSVGRSLDISRFSSYNELREE 708
             ++S  GC+ DS  +       DQ+  P  TFVKVYKSG+ GRSLDI+RFSSY+ELR E
Sbjct: 764 TLNSS--GCLDDSGYVPPCSDNSDQVNRPPATFVKVYKSGTYGRSLDITRFSSYHELRRE 821

Query: 709 LGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMG 768
           LG++FG+EG+ EDPLRSGWQLVFVDRE DVLL+GDDPW+ F S V  IKILSP++VQ+MG
Sbjct: 822 LGRLFGLEGQLEDPLRSGWQLVFVDREEDVLLVGDDPWQEFASTVSCIKILSPQEVQQMG 881

Query: 769 EQGVESFSPSSGQR 782
           +QG+E  S +   R
Sbjct: 882 KQGLELLSSAPAAR 895


>gi|302030878|gb|ADK91822.1| auxin response factor 6 [Solanum lycopersicum]
          Length = 868

 Score =  700 bits (1806), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/451 (78%), Positives = 379/451 (84%), Gaps = 7/451 (1%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ K LNSELWHACAGPLVSLP VGTRVVYFPQGHSEQVAA+TNKE++ HIP+YP LPPQ
Sbjct: 4   GEKKSLNSELWHACAGPLVSLPHVGTRVVYFPQGHSEQVAASTNKEINGHIPSYPGLPPQ 63

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDT-FVPIELGIPSKQPTNYFCKTLTA 121
           LICQLHNVTM ADVETDEVYAQMTLQPL+P+EQKD   +P ELG  SKQP+NYFCKTLTA
Sbjct: 64  LICQLHNVTMDADVETDEVYAQMTLQPLTPQEQKDVCLLPAELGTLSKQPSNYFCKTLTA 123

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAEKVFP LD+S QPP QELI +DLH  EWKFRHIFRGQPKRHLLT
Sbjct: 124 SDTSTHGGFSVPRRAAEKVFPPLDYSQQPPVQELIGKDLHGNEWKFRHIFRGQPKRHLLT 183

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWSVFVSAKRLVAGDSV+FIWNE NQLLLGIRRA RP TV+PSSVLSSDSMHIGLLAAA
Sbjct: 184 TGWSVFVSAKRLVAGDSVIFIWNENNQLLLGIRRANRPQTVLPSSVLSSDSMHIGLLAAA 243

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           AHAAATNS FT+FFNPRA PSEFVIPL KY KAV+HTRVSVGMRFRMLFETEESS+RRYM
Sbjct: 244 AHAAATNSRFTIFFNPRACPSEFVIPLAKYAKAVYHTRVSVGMRFRMLFETEESSIRRYM 303

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRL 361
           GTITGI DLDPVRW NSHW+SVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS F LRL
Sbjct: 304 GTITGIGDLDPVRWPNSHWQSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFSLRL 363

Query: 362 KRPWHPSTSSFN--DNRDETA-SGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFL 418
           KRPW P   SF    N D T  S L WL GG G+QG+ +LNFQ  G+ P+MQ R + S L
Sbjct: 364 KRPWPPGLPSFPGLSNGDMTMNSQLPWLHGGMGDQGIQSLNFQGFGVTPFMQPRFDASML 423

Query: 419 GNDHNQQYQAMLAAGMQSGDPVRQQFMQLQQ 449
           G   +   QAM  A + S     Q  MQ Q 
Sbjct: 424 GLQPD-ILQAM--AALDSSKLANQPLMQFQH 451


>gi|350539495|ref|NP_001234663.1| auxin response factor 6 [Solanum lycopersicum]
 gi|294652034|gb|ACU30063.2| auxin response factor 6 [Solanum lycopersicum]
          Length = 881

 Score =  698 bits (1802), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/451 (78%), Positives = 379/451 (84%), Gaps = 7/451 (1%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ K LNSELWHACAGPLVSLP VGTRVVYFPQGHSEQVAA+TNKE++ HIP+YP LPPQ
Sbjct: 17  GEKKSLNSELWHACAGPLVSLPHVGTRVVYFPQGHSEQVAASTNKEINGHIPSYPGLPPQ 76

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDT-FVPIELGIPSKQPTNYFCKTLTA 121
           LICQLHNVTM ADVETDEVYAQMTLQPL+P+EQKD   +P ELG  SKQP+NYFCKTLTA
Sbjct: 77  LICQLHNVTMDADVETDEVYAQMTLQPLTPQEQKDVCLLPAELGTLSKQPSNYFCKTLTA 136

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAEKVFP LD+S QPP QELI +DLH  EWKFRHIFRGQPKRHLLT
Sbjct: 137 SDTSTHGGFSVPRRAAEKVFPPLDYSQQPPVQELIGKDLHGNEWKFRHIFRGQPKRHLLT 196

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWSVFVSAKRLVAGDSV+FIWNE NQLLLGIRRA RP TV+PSSVLSSDSMHIGLLAAA
Sbjct: 197 TGWSVFVSAKRLVAGDSVIFIWNENNQLLLGIRRANRPQTVLPSSVLSSDSMHIGLLAAA 256

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           AHAAATNS FT+FFNPRA PSEFVIPL KY KAV+HTRVSVGMRF+MLFETEESS+RRYM
Sbjct: 257 AHAAATNSRFTIFFNPRACPSEFVIPLAKYAKAVYHTRVSVGMRFQMLFETEESSIRRYM 316

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRL 361
           GTITGI DLDPVRW NSHW+SVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS F LRL
Sbjct: 317 GTITGIGDLDPVRWPNSHWQSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFSLRL 376

Query: 362 KRPWHPSTSSFN--DNRDETA-SGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFL 418
           KRPW P   SF    N D T  S L WL GG G+QG+ +LNFQ  G+ P+MQ R + S L
Sbjct: 377 KRPWPPGLPSFPGLSNGDMTMNSQLPWLHGGMGDQGIQSLNFQGFGVTPFMQPRFDASML 436

Query: 419 GNDHNQQYQAMLAAGMQSGDPVRQQFMQLQQ 449
           G   +   QAM  A + S     Q  MQ Q 
Sbjct: 437 GLQPD-ILQAM--AALDSSKLANQPLMQFQH 464


>gi|350540650|ref|NP_001234540.1| auxin response factor 6-1 [Solanum lycopersicum]
 gi|300252249|gb|ADJ96372.1| auxin response factor 6-1 [Solanum lycopersicum]
          Length = 524

 Score =  694 bits (1792), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/488 (74%), Positives = 393/488 (80%), Gaps = 24/488 (4%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ KCLNSELWHACAGPLVSLP VG+RVVYFPQGHS QVAA+TNKEVD+HIPNYP LPPQ
Sbjct: 16  GEKKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSVQVAASTNKEVDAHIPNYPGLPPQ 75

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDT-FVPIELGIPSKQPTNYFCKTLTA 121
           LICQLHN+TMHADVETDEVYAQMTLQPLSP+EQKD   +P ELGIPSK PTNYFCKTLTA
Sbjct: 76  LICQLHNLTMHADVETDEVYAQMTLQPLSPQEQKDVCLLPAELGIPSKLPTNYFCKTLTA 135

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAEKVFP LD+S QPP QELIA+DLH  EWK RHIFRGQPKRHLLT
Sbjct: 136 SDTSTHGGFSVPRRAAEKVFPPLDYSQQPPCQELIAKDLHGNEWKLRHIFRGQPKRHLLT 195

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWSVFVSAKRLVAGD+V+FIWNE NQLLLGIRRA RP T+MP SVLSSDSMHIGLLAAA
Sbjct: 196 TGWSVFVSAKRLVAGDAVIFIWNENNQLLLGIRRANRPQTLMPFSVLSSDSMHIGLLAAA 255

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           AHA ATN+ FT+F+NPRASPSEFVIPL KY KAV+HTR+SVGMRFRMLFETEESSVRRYM
Sbjct: 256 AHATATNTRFTIFYNPRASPSEFVIPLAKYAKAVYHTRISVGMRFRMLFETEESSVRRYM 315

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRL 361
           GTITGISDLDPV W NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS F LRL
Sbjct: 316 GTITGISDLDPVCWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFSLRL 375

Query: 362 KRPWH---PSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFL 418
           KRPW    PS   F +      S L+WLRG  G+QG+ +LNFQ  G  P+MQ R++ S L
Sbjct: 376 KRPWPSGLPSLPGFPNVGLTMNSPLSWLRGDMGDQGMQSLNFQGFGATPFMQPRMDASML 435

Query: 419 GNDHNQQYQAMLAAGMQSGDPVR---QQFMQLQQP----------FQYLQQSGSQ-NPLQ 464
           G       Q  +   M + DP +   Q  MQ Q             Q LQ S SQ N +Q
Sbjct: 436 G------LQPDILQTMTALDPSKLANQSLMQFQHSIPNSSAPLSQIQMLQPSHSQHNLIQ 489

Query: 465 LKQQQHLL 472
              + HL+
Sbjct: 490 GFSENHLI 497


>gi|19352041|dbj|BAB85914.1| auxin response factor 6a [Oryza sativa]
          Length = 396

 Score =  684 bits (1765), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/395 (85%), Positives = 356/395 (90%), Gaps = 3/395 (0%)

Query: 4   DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQL 63
           + KCLNSELWHACAGPLVSLP VG+RVVYFPQGHSEQVAA+TNKE++S IPNYPNLPPQL
Sbjct: 2   EQKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLPPQL 61

Query: 64  ICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASD 123
           ICQLHNVTMHAD ETDEVYAQMTLQPLSP+E KD F+P ELG  SKQPTNYFCKTLTASD
Sbjct: 62  ICQLHNVTMHADAETDEVYAQMTLQPLSPQELKDPFLPAELGTASKQPTNYFCKTLTASD 121

Query: 124 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 183
           TSTHGGFSVPRRAAEKVFP LDF+ QPPAQEL+A+DLH  EWKFRHIFRGQPKRHLLTTG
Sbjct: 122 TSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELMAKDLHGNEWKFRHIFRGQPKRHLLTTG 181

Query: 184 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAH 243
           WSVFVSAKRLVAGDSVLFIWN+ NQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAAAH
Sbjct: 182 WSVFVSAKRLVAGDSVLFIWNDSNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAH 241

Query: 244 AAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGT 303
           AA+TNS FT+F+NPRASPSEFVIPL KYVKAV+HTR+SVGMRFRMLFETEESSVRRYMGT
Sbjct: 242 AASTNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGT 301

Query: 304 ITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKR 363
           ITGISDLDPVRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS FPLRLKR
Sbjct: 302 ITGISDLDPVRWMNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLKR 361

Query: 364 PWHPSTSS-FNDNRDETASGLNWLRG--GTGEQGL 395
           PW     S +    D+ AS L WLR    TG Q L
Sbjct: 362 PWPTGLPSLYGGKEDDLASSLMWLRDSQNTGFQSL 396


>gi|356510873|ref|XP_003524158.1| PREDICTED: auxin response factor 6-like [Glycine max]
          Length = 884

 Score =  680 bits (1755), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 341/444 (76%), Positives = 367/444 (82%), Gaps = 27/444 (6%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ + L+SELWHACAGPLVSLP VG+RVVYFPQGHSEQVA +TN+EVD HIPNYP+LPPQ
Sbjct: 15  GEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNREVDGHIPNYPSLPPQ 74

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           LICQLHNVTMHAD ETDEVYAQMTLQPL+P+EQK+ ++P ELG PSKQPTNYFCK LTAS
Sbjct: 75  LICQLHNVTMHADTETDEVYAQMTLQPLNPQEQKEAYLPAELGTPSKQPTNYFCKILTAS 134

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSVPRRAAEKVFP LDFS QPP QELIARDLH  EWKFRHIFRGQPKRHLLTT
Sbjct: 135 DTSTHGGFSVPRRAAEKVFPPLDFSQQPPCQELIARDLHGNEWKFRHIFRGQPKRHLLTT 194

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP  VMPSSVLSSDSMH+GLLAAAA
Sbjct: 195 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQPVMPSSVLSSDSMHLGLLAAAA 254

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 302
           HAAATNS FT+F+NPRASPSEFVIP  KYVKAV+HTRVSVGMRFRMLFETEESSVRRYMG
Sbjct: 255 HAAATNSRFTIFYNPRASPSEFVIPFAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMG 314

Query: 303 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 362
           TITGISDLD VRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS FPLRLK
Sbjct: 315 TITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLK 374

Query: 363 RPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGNDH 422
           RPW P   SF+  +D+                         G        ++PS + N  
Sbjct: 375 RPWPPGLPSFHGLKDD-----------------------DFGTNXXXXXXLDPSMV-NYQ 410

Query: 423 NQQYQAMLAAGMQ---SGDPVRQQ 443
           +  YQAM AA +Q   + DP +Q 
Sbjct: 411 SDMYQAMAAAALQDMWTSDPSKQH 434


>gi|224085433|ref|XP_002307574.1| predicted protein [Populus trichocarpa]
 gi|222857023|gb|EEE94570.1| predicted protein [Populus trichocarpa]
          Length = 372

 Score =  678 bits (1749), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/371 (89%), Positives = 348/371 (93%), Gaps = 1/371 (0%)

Query: 4   DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQL 63
           D KCLNSELWHACAGPLVSLP VG+RVVYFPQGHSEQVAA+TNKEVD+HIPNYP+LPPQL
Sbjct: 1   DKKCLNSELWHACAGPLVSLPHVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLPPQL 60

Query: 64  ICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFV-PIELGIPSKQPTNYFCKTLTAS 122
           ICQLHNVTMHADVETDEVYAQMTLQPLS ++QKD ++ P ELG  SKQPTNYFCKTLTAS
Sbjct: 61  ICQLHNVTMHADVETDEVYAQMTLQPLSQDDQKDAYLLPAELGTASKQPTNYFCKTLTAS 120

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSVPRRAAEKVFP+LD+S  PPAQELIARDLHD EWKFRHIFRGQPKRHLLTT
Sbjct: 121 DTSTHGGFSVPRRAAEKVFPTLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTT 180

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP T MPSSVLSSDSMHIGLLAAAA
Sbjct: 181 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTFMPSSVLSSDSMHIGLLAAAA 240

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 302
           HAAATNS FT+F+NPRASPSEFVIPL KY+KAV+HTRVSVGMRFRMLFETEESSVRRYMG
Sbjct: 241 HAAATNSRFTIFYNPRASPSEFVIPLVKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMG 300

Query: 303 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 362
           TITGISDLDPVRW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS FP+RLK
Sbjct: 301 TITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSAFPMRLK 360

Query: 363 RPWHPSTSSFN 373
           RPW     SF+
Sbjct: 361 RPWPSGLPSFH 371


>gi|224062573|ref|XP_002300854.1| predicted protein [Populus trichocarpa]
 gi|222842580|gb|EEE80127.1| predicted protein [Populus trichocarpa]
          Length = 372

 Score =  676 bits (1745), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/371 (89%), Positives = 346/371 (93%), Gaps = 1/371 (0%)

Query: 4   DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQL 63
           DNKCLNSELWHACAGPLVSLP VG+R VYFPQGHSEQVAA+TNKEVD+HIPNYP+LP QL
Sbjct: 1   DNKCLNSELWHACAGPLVSLPHVGSRAVYFPQGHSEQVAASTNKEVDAHIPNYPSLPAQL 60

Query: 64  ICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFV-PIELGIPSKQPTNYFCKTLTAS 122
           ICQLHNVTMHADVETDEVYAQMTLQPLSPE++KD ++ P ELG  SKQP+NYFCKTLTAS
Sbjct: 61  ICQLHNVTMHADVETDEVYAQMTLQPLSPEDKKDAYLLPAELGTASKQPSNYFCKTLTAS 120

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSVPRRAAEKVFP LDFS  PPAQELIARDLHD EWKFRHIFRGQPKRHLLTT
Sbjct: 121 DTSTHGGFSVPRRAAEKVFPPLDFSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTT 180

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAAA
Sbjct: 181 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAA 240

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 302
           HAAATNS FT+F+NPR SPSEFVIPL KY+KAV+HTRVSVGMRFRMLFETEESSVRRYMG
Sbjct: 241 HAAATNSRFTIFYNPRTSPSEFVIPLVKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMG 300

Query: 303 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 362
           TITGISDLDP RW NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS FP+RLK
Sbjct: 301 TITGISDLDPARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSAFPMRLK 360

Query: 363 RPWHPSTSSFN 373
           RPW     SF+
Sbjct: 361 RPWPSGLPSFH 371


>gi|242074738|ref|XP_002447305.1| hypothetical protein SORBIDRAFT_06g032500 [Sorghum bicolor]
 gi|241938488|gb|EES11633.1| hypothetical protein SORBIDRAFT_06g032500 [Sorghum bicolor]
          Length = 821

 Score =  669 bits (1727), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 340/460 (73%), Positives = 377/460 (81%), Gaps = 7/460 (1%)

Query: 6   KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 65
           KCLNSELWHACAGPLV LPTVGTRVVYFPQGHSEQVAA+TNKEVD HIPNYPNLPPQLIC
Sbjct: 26  KCLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVDGHIPNYPNLPPQLIC 85

Query: 66  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTS 125
           QLH+VTMHADVETDEVYAQMTLQPL+P+EQ D ++P E+GI SKQPTNYFCKTLTASDTS
Sbjct: 86  QLHDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQPTNYFCKTLTASDTS 145

Query: 126 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFR--GQPKRHLLTTG 183
           THGGFSVPRRAAE+VFP L  S        +   +  +      I     QPKRHLLTTG
Sbjct: 146 THGGFSVPRRAAERVFPPLVISHSSLQHRSLLHGIFMMSSGNSGISSEASQPKRHLLTTG 205

Query: 184 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAH 243
           WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAAAH
Sbjct: 206 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAH 265

Query: 244 AAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGT 303
           AAATNS FT+F+NPRASPSEFVIPL+KY+KAVFHTR+SVGMRFRMLFETEESSVRRYMGT
Sbjct: 266 AAATNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGT 325

Query: 304 ITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKR 363
           IT +SD DPVRW +S+WRSVKVGWDESTAGER PRVSLWEIEPLTTFPMYPSLFPLR+K 
Sbjct: 326 ITEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFPMYPSLFPLRVKH 385

Query: 364 PWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGNDHN 423
           PW+   ++ +D+    ++ L WLRG  GE G  +LNFQS G+  W QQR+ PS L NDH+
Sbjct: 386 PWYSGVAALHDD----SNALMWLRGVAGEGGFQSLNFQSPGIGSWGQQRLHPSLLSNDHD 441

Query: 424 QQYQAMLAAGMQSGDP-VRQQFMQLQQPFQYLQQSGSQNP 462
           Q    + AA        ++QQF+ LQQP Q  Q+  + NP
Sbjct: 442 QYQAVVAAAAASQSGGYLKQQFLHLQQPMQSPQEQCNLNP 481


>gi|301793225|emb|CBA12003.1| putative auxin response factor 6/8 [Ginkgo biloba]
          Length = 924

 Score =  659 bits (1700), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 339/471 (71%), Positives = 377/471 (80%), Gaps = 11/471 (2%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ + LNSELWHACAGPLV LP VG+ VVYFPQGHSEQVAA+TNKEVD+HIPNYPNLPPQ
Sbjct: 12  GERRSLNSELWHACAGPLVLLPVVGSHVVYFPQGHSEQVAASTNKEVDAHIPNYPNLPPQ 71

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           LICQLHNVT+ ADVETDEVYAQMTLQPL+P+E K++++   LG PS QPTNYFCKTLTAS
Sbjct: 72  LICQLHNVTLQADVETDEVYAQMTLQPLNPQEPKESYLAPALGTPSGQPTNYFCKTLTAS 131

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFS+PRRAAEKVFP LDF+ QPP QELIARDLHD EWKFRHI+RGQPKRHLLTT
Sbjct: 132 DTSTHGGFSIPRRAAEKVFPLLDFTQQPPVQELIARDLHDTEWKFRHIYRGQPKRHLLTT 191

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWSVFVSAKRLVAGDSVLFI N+K QLLLGIRRA R   VMPSSVLSSDSMHIG+LAAAA
Sbjct: 192 GWSVFVSAKRLVAGDSVLFIRNDKGQLLLGIRRANRAQMVMPSSVLSSDSMHIGVLAAAA 251

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 302
           HAA+TN  FT+F+NPRASPSEFV+PL K+ KAV+HTRVS+GMRFRMLFETEES+VRRYMG
Sbjct: 252 HAASTNCRFTIFYNPRASPSEFVVPLAKFEKAVYHTRVSIGMRFRMLFETEESTVRRYMG 311

Query: 303 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 362
           TITGI DLDP RW NS WRS+KVGWDESTAGERQPRVSLWEIEPLTTF MYP  +P  LK
Sbjct: 312 TITGIGDLDPYRWRNSQWRSIKVGWDESTAGERQPRVSLWEIEPLTTFLMYPPPYPPGLK 371

Query: 363 RPW---HPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPW--MQQRVEPSF 417
           RPW       S + ++       L  +R   GE  L  L+FQSLGM PW  MQQR++ S 
Sbjct: 372 RPWSHIQGIPSLYGNDDGNIRMSLMSMRDN-GEHSLQALSFQSLGMDPWMQMQQRID-SC 429

Query: 418 LGNDHNQQYQAMLAAGMQ---SGDPVRQQFMQLQQPFQYLQ-QSGSQNPLQ 464
           L    +  YQ M    +Q   S DP +Q   Q +QP    Q Q   Q PLQ
Sbjct: 430 LTGIQSDVYQGMPTVSVQETRSVDPSKQLNYQQKQPVLSEQLQCRPQLPLQ 480



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 100/223 (44%), Positives = 141/223 (63%), Gaps = 20/223 (8%)

Query: 569 QSLGSKYEP-SQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLP 627
           Q + S+ EP +Q    V SM L + +  ++ +   E   +DSQ++++FGV+ID+  L++ 
Sbjct: 666 QRVLSQTEPLAQSNIPVQSMPL-TQFALRNCSSDQEGVQSDSQSNLLFGVNIDTPSLVIT 724

Query: 628 TTVSSFTTSVDPGV---SSMPLGD----------SGF-HNSMYGC---MQDSSELLHNVG 670
            TVS+ + ++  G    SS  + D          SGF  NS  G    + ++    H   
Sbjct: 725 DTVSN-SRNIGNGAYVGSSFSVTDLLNVPSCAPTSGFPMNSSIGASGGLDENGLSQHGAN 783

Query: 671 QIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLV 730
                 PTRTF KVYK GSVGRSLD++RF+ Y ELR EL +MFG+EG+ EDP RSGWQLV
Sbjct: 784 YAHINPPTRTFTKVYKLGSVGRSLDVTRFNGYQELRAELDRMFGLEGQLEDPQRSGWQLV 843

Query: 731 FVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVE 773
           FVD+E DVLLLGDDPWE FV++V +IKILSP +V +M ++G++
Sbjct: 844 FVDKEKDVLLLGDDPWEEFVNSVRFIKILSPPEVMQMSQEGIQ 886


>gi|301793223|emb|CBA12002.1| putative auxin response factor 6/8 [Ephedra distachya]
          Length = 870

 Score =  626 bits (1614), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 339/516 (65%), Positives = 381/516 (73%), Gaps = 35/516 (6%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ + LNSELWHACAGPLVSLP VG+RVVYFPQGHSEQVAA+TN+E+D  IPNY +LPPQ
Sbjct: 13  GERRTLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNRELDVQIPNYTSLPPQ 72

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           LIC LHNVTM+ADVETDEVYAQMTLQPLS +EQK+++   +LG PSKQP+NYFC TLTAS
Sbjct: 73  LICHLHNVTMNADVETDEVYAQMTLQPLSLQEQKESYFVPDLGSPSKQPSNYFCXTLTAS 132

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFS+PRRAAEKVFP LDF+ QPPAQEL ARDLH+ EWKFRHI+RGQPKRHLLTT
Sbjct: 133 DTSTHGGFSIPRRAAEKVFPLLDFTQQPPAQELCARDLHNTEWKFRHIYRGQPKRHLLTT 192

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWSVFVSAKRLVAGDSVLFI N+  QLLLGIRRA + PTVMPSSVLSSDSMHIG+LAAAA
Sbjct: 193 GWSVFVSAKRLVAGDSVLFIRNDSGQLLLGIRRANKSPTVMPSSVLSSDSMHIGVLAAAA 252

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 302
           HAAATNS F +F+NPRASPSEFVIP +KY KAV+HT+VSVG+RFRMLFETEES VRRYMG
Sbjct: 253 HAAATNSPFNIFYNPRASPSEFVIPFSKYEKAVYHTQVSVGLRFRMLFETEESGVRRYMG 312

Query: 303 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 362
           TITGI D+DPVRW NS WRS+KVGWDESTAGER PRVSLWEIEPLTTF MYP  + L LK
Sbjct: 313 TITGIGDMDPVRWPNSRWRSLKVGWDESTAGERNPRVSLWEIEPLTTFLMYPPPYSLNLK 372

Query: 363 RPWH--PSTSSFNDNRDETASGLN---WLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSF 417
           RPW      SSF   ++E  S      W+ G  GE+    LN Q  GM     Q + P +
Sbjct: 373 RPWTHLQGISSFPGIKEEDVSMKKPFLWMGGENGERIFHGLNSQ--GMLDQCMQ-MPPKY 429

Query: 418 ---LGNDHNQQYQAMLAAGMQS------GDPV----------RQQFMQLQQPFQYLQ--- 455
              +   H   YQ M    +Q         P+           QQ   + QP    Q   
Sbjct: 430 DSCITGSHPDIYQMMATQALQETRSQNDSKPLVQFPSQHSIASQQLQSMAQPSLQSQILQ 489

Query: 456 -----QSGSQNPLQLKQQQHLLQQLNSQAEDRAQQQ 486
                QS SQN  Q  Q Q  LQQ NS    + QQ+
Sbjct: 490 QLQRPQSLSQNQAQRLQPQPSLQQPNSVYMQQPQQK 525



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 75/118 (63%), Positives = 90/118 (76%), Gaps = 3/118 (2%)

Query: 668 NVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGW 727
           N+ QI    PTRTF KVYK GS+GRS+D++RFS Y ELR EL +MF +EG+ ED  RSGW
Sbjct: 729 NLSQIH--LPTRTFTKVYKLGSIGRSIDVTRFSGYPELRCELARMFNLEGQLED-CRSGW 785

Query: 728 QLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANS 785
           QLVFVD+ENDVLLLGDDPWE FV NV YIKILSP +VQ+M ++G+E  +    QR  S
Sbjct: 786 QLVFVDKENDVLLLGDDPWEEFVINVRYIKILSPPEVQQMTQEGMELLNSIPLQRQTS 843


>gi|302806465|ref|XP_002984982.1| hypothetical protein SELMODRAFT_451395 [Selaginella moellendorffii]
 gi|300147192|gb|EFJ13857.1| hypothetical protein SELMODRAFT_451395 [Selaginella moellendorffii]
          Length = 835

 Score =  613 bits (1581), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 389/821 (47%), Positives = 499/821 (60%), Gaps = 115/821 (14%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           GD K +N  LW  CAGPL++LP +G++VVYFPQGHSEQV A+T+KE D  +P+YPNLPPQ
Sbjct: 10  GDKKAINQALWLECAGPLITLPAIGSQVVYFPQGHSEQVIASTHKEADFEVPSYPNLPPQ 69

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQ-KDTFVPIELGIPSKQPTNYFCKTLTA 121
           L C LHN+T+HAD E DEV+AQMTLQP S     KD F+  + GI +KQ    F KTLTA
Sbjct: 70  LFCILHNITLHADQENDEVFAQMTLQPFSQTALLKDPFLLPDFGIQTKQTIVSFSKTLTA 129

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFS+PRRAAEKVFP LDF+  PPAQEL+ARDLH+ EW FRHI+RGQP+RHLLT
Sbjct: 130 SDTSTHGGFSIPRRAAEKVFPPLDFTKTPPAQELVARDLHNNEWHFRHIYRGQPRRHLLT 189

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWSVFVSAKRL AGD+VLF+ +E+ Q +LGIRRA R  T +P+S+LSSDSM IG+LAAA
Sbjct: 190 TGWSVFVSAKRLQAGDTVLFLRDEQGQHMLGIRRANRQQTNLPTSLLSSDSMLIGVLAAA 249

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           AHAA+TNS FT+F+NPRASPSEFVIPL KY KA+   +++VGMRFRM  ETE+SS RRYM
Sbjct: 250 AHAASTNSRFTIFYNPRASPSEFVIPLAKYQKALHPPQLTVGMRFRMEMETEDSSTRRYM 309

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSLFPLR 360
           GTITGI DLDPVRW NSHWRS+KVGWDESTAG++Q RVS WEIEPLT  F +  S F LR
Sbjct: 310 GTITGIGDLDPVRWPNSHWRSLKVGWDESTAGQKQRRVSAWEIEPLTVPFLLCNSSFLLR 369

Query: 361 LKRPWHPS------TSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSL-GMFPWMQQR- 412
            KRP   S      + S  +   +  +   W RG  G+  +  +NF  L GM  W+Q + 
Sbjct: 370 SKRPRAFSGVLNTLSLSLAEEELQMKAPSIWARGEEGKFSMQNMNFPGLSGMDHWLQLQQ 429

Query: 413 --------------VEPSFLGNDHNQQYQAMLAAGMQSGDPVRQQFMQLQQPFQYLQQSG 458
                         ++P +        Y ++L   M++ D   +Q MQ  Q FQ +Q + 
Sbjct: 430 KAGGSAAVTPPPPVIQPGY--------YSSILQE-MRTIDATPKQLMQSPQAFQPMQFNQ 480

Query: 459 SQNPL------QLKQQQHLLQQLNSQAEDRAQQQQQPQQHMYHDALQIRTDELLQRQQSN 512
           S  PL      Q +Q  HL   +   A   A             AL+   D+ + R  ++
Sbjct: 481 SMPPLLQQQQQQAQQMMHLPPNVPEAASMHAP--------YIPAALKTPPDQEVNRNSNS 532

Query: 513 LPSPSFSKANFMDSSTEISVSISPMQNMLGSLPEGSGNLLNFSGAGPSMLRQQFPQQSLG 572
            P        F+    E  VS + M  + GS P              S+ +QQ  QQ  G
Sbjct: 533 YPP-------FI---IEDGVSYTSM--LQGSAPA-------------SLPKQQHHQQQAG 567

Query: 573 ----------SKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSS 622
                     + + PS +R+   S+ + +S     A+    + + D ++ V+FGV+ID  
Sbjct: 568 MLTCSSLDHQTNWMPS-LREGDASIPVDASLLPPSASQQALDQDNDPRSHVLFGVNID-- 624

Query: 623 GLLLPTTVSSFTTSVDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQ--IDQLT---- 676
           G + P        S  P   S P   SG         Q    LLH   +  + Q +    
Sbjct: 625 GQVPP--------SYAPPPFSKPKDFSG--------AQADIALLHAAEENGVPQPSWPQQ 668

Query: 677 ----PTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFV 732
               P RTF KV+K GSVGRSLDI+RF +Y+ELR EL +MFG+E       +SGWQLVF+
Sbjct: 669 VYPPPVRTFTKVHKVGSVGRSLDITRFKNYHELRNELTRMFGLEHDH----KSGWQLVFI 724

Query: 733 DRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVE 773
           D END+LLLGDDPW+ F+  V  I+ILS  ++ +M ++ +E
Sbjct: 725 DNENDMLLLGDDPWDEFIGCVKSIRILSSSEILQMNQEHME 765


>gi|302808955|ref|XP_002986171.1| hypothetical protein SELMODRAFT_451397 [Selaginella moellendorffii]
 gi|300146030|gb|EFJ12702.1| hypothetical protein SELMODRAFT_451397 [Selaginella moellendorffii]
          Length = 826

 Score =  610 bits (1573), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 385/815 (47%), Positives = 494/815 (60%), Gaps = 115/815 (14%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           GD K +N  LW  CAGPL++LP +G++VVYFPQGHSEQV A+T+KE D  +P+YPNLPPQ
Sbjct: 10  GDKKAINQALWLECAGPLITLPAIGSQVVYFPQGHSEQVIASTHKEADFEVPSYPNLPPQ 69

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQ-KDTFVPIELGIPSKQPTNYFCKTLTA 121
           L C LHN+T+HAD E DEV+AQMTLQP S     KD F+  + GI +KQ    F KTLTA
Sbjct: 70  LFCILHNITLHADQENDEVFAQMTLQPFSQTALLKDPFLLPDFGIQTKQTIVSFSKTLTA 129

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFS+PRRAAEKVFP LDF+  PPAQEL+ARDLH+ EW FRHI+RGQP+RHLLT
Sbjct: 130 SDTSTHGGFSIPRRAAEKVFPPLDFTKTPPAQELVARDLHNNEWHFRHIYRGQPRRHLLT 189

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWSVFVSAKRL AGD+VLF+ +E+ Q +LGIRRA R  T +P+S+LSSDSM IG+LAAA
Sbjct: 190 TGWSVFVSAKRLQAGDTVLFLRDEQGQHMLGIRRANRQQTNLPTSLLSSDSMLIGVLAAA 249

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           AHAA+TNS FT+F+NPRASPSEFVIPL KY KA+   +++VGMRFRM  ETE+SS RRYM
Sbjct: 250 AHAASTNSRFTIFYNPRASPSEFVIPLAKYQKALHPPQLTVGMRFRMEMETEDSSTRRYM 309

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSLFPLR 360
           GTITGI DLDPVRW NSHWRS+KVGWDESTAG++Q RVS WEIEPLT  F +  S F LR
Sbjct: 310 GTITGIGDLDPVRWPNSHWRSLKVGWDESTAGQKQRRVSAWEIEPLTVPFLLCNSSFLLR 369

Query: 361 LKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSL-GMFPWMQQR------- 412
            KRP         +   +  +   W RG  G+  +  +NF  L GM  W+Q +       
Sbjct: 370 SKRP------RGTEEELQMKAPSIWARGEEGKFSMQNMNFPGLSGMDHWLQLQQKAGGSA 423

Query: 413 --------VEPSFLGNDHNQQYQAMLAAGMQSGDPVRQQFMQLQQPFQYLQQSGSQNPL- 463
                   ++P +        Y ++L   M++ D   +Q MQ  Q FQ +Q + S  PL 
Sbjct: 424 AVTPPPPVIQPGY--------YSSILQE-MRTIDATPKQLMQSPQAFQPMQFNQSIPPLL 474

Query: 464 -----QLKQQQHLLQQLNSQAEDRAQQQQQPQQHMYHDALQIRTDELLQRQQSNLPSPSF 518
                Q +Q  HL   +   A   A             AL+   D+ + R  ++ P    
Sbjct: 475 QQQQQQAQQMMHLPPNVPEAASMHAP--------YIPAALKTPPDQEVNRNSNSYPP--- 523

Query: 519 SKANFMDSSTEISVSISPMQNMLGSLPEGSGNLLNFSGAGPSMLRQQFPQQSLG------ 572
                     E  VS + M  + GS P              S+ +QQ  QQ  G      
Sbjct: 524 -------LIIEDGVSYTSM--LQGSAPA-------------SLPKQQHHQQQAGMLTCSS 561

Query: 573 ----SKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPT 628
               + + PS +R+   S+ + +S     ++    + + D ++ V+FGV+ID  G + P 
Sbjct: 562 LDHQTNWMPS-LREGDASIPVDASLLPPSSSQQALDQDNDPRSHVLFGVNID--GQVPP- 617

Query: 629 TVSSFTTSVDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQ--IDQLT--------PT 678
                  S  P   S P   SG         Q    LLH   +  + Q +        P 
Sbjct: 618 -------SYAPPPFSKPKDFSG--------AQPDIALLHAAEENGVPQPSWPQQVYPPPV 662

Query: 679 RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 738
           RTF KV+K GSVGRSLDI+RF +Y+ELR EL +MFG+E       +SGWQLVF+D END+
Sbjct: 663 RTFTKVHKVGSVGRSLDITRFKNYHELRNELTRMFGLEHDH----KSGWQLVFIDNENDM 718

Query: 739 LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVE 773
           LLLGDDPW+ F+  V  I+ILS  ++ +M ++ +E
Sbjct: 719 LLLGDDPWDEFIGCVKSIRILSSSEILQMNQEHME 753


>gi|168042037|ref|XP_001773496.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162675198|gb|EDQ61696.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1103

 Score =  570 bits (1469), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 292/448 (65%), Positives = 342/448 (76%), Gaps = 25/448 (5%)

Query: 9   NSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLH 68
            SELWHACAGPLVSLP +G+RVVYFPQGH+EQVAA+T +E ++HIPNYP+LP +L+C L 
Sbjct: 75  TSELWHACAGPLVSLPPIGSRVVYFPQGHTEQVAASTQREAETHIPNYPSLPSRLVCLLD 134

Query: 69  NVTMH---------------ADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTN 113
           NVT+H               AD+ETDEVYAQMTL P+ P  +K+  +  ++GI S+QPT+
Sbjct: 135 NVTLHVSDRYSMSLIDVVIQADLETDEVYAQMTLIPVPPANEKEALMSPDIGIRSRQPTD 194

Query: 114 YFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRG 173
           YFCKTLTASDTSTHGGFS+PRRAAEKVFP LD+S  PPAQEL ARDLHD EW FRHI+RG
Sbjct: 195 YFCKTLTASDTSTHGGFSIPRRAAEKVFPPLDYSQTPPAQELKARDLHDQEWHFRHIYRG 254

Query: 174 QPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSM 233
           QP+RHLLTTGWSVFVSAKRL AGD+VLFI ++K QL LGIRR  R  TVMPSSVLSSDSM
Sbjct: 255 QPRRHLLTTGWSVFVSAKRLQAGDAVLFIRDDKGQLQLGIRRQNRQQTVMPSSVLSSDSM 314

Query: 234 HIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETE 293
           HIG+LAAA HAAAT+S FT+F+NPR SPSEFVIP+ KY KA+ + +VSVGMRFRM+FETE
Sbjct: 315 HIGVLAAANHAAATSSRFTIFYNPRQSPSEFVIPVAKYQKAICNLQVSVGMRFRMVFETE 374

Query: 294 ESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPM 352
           ESSVRRYMGTITG+ DLDP+RW NSHWRS+KVGWDESTAGERQ RVSLWEIEPLTT F +
Sbjct: 375 ESSVRRYMGTITGMGDLDPIRWPNSHWRSLKVGWDESTAGERQRRVSLWEIEPLTTPFLL 434

Query: 353 YPSLFPLRLKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQ--GLTTLNFQSLGMFPWM- 409
            P     R KRPW       ++  D      ++  G +G     L  LN ++ GM  WM 
Sbjct: 435 CPPPLTFRAKRPW---GGRVDEEMDSMLKKASFWSGDSGSHMDALGALNLRNFGMSSWMR 491

Query: 410 --QQRVEPSFLGNDHNQQYQAMLAAGMQ 435
             QQRVEP  L    N+ Y+A  AA +Q
Sbjct: 492 TPQQRVEPG-LPAQQNEYYRAFAAAALQ 518



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 79/189 (41%), Positives = 110/189 (58%), Gaps = 18/189 (9%)

Query: 601 GTENCNTDSQNSVVFGVHIDSSGLLLPTTVSS-----FTTSVDPGV----------SSMP 645
           G E  +  S   ++FGV I+   L+   +V+S     F  S DP            S  P
Sbjct: 719 GQEQDSVQSDRHLLFGVSIEQP-LVGSNSVTSLQPHAFAKSKDPQSRFSGNTVLQGSYYP 777

Query: 646 LGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPT-RTFVKVYKSGSVGRSLDISRFSSYNE 704
            G++    +M G   D + +         + PT RTF KV+K GSVGRS+D+ +F +Y+E
Sbjct: 778 SGNADI-PTMNGVGLDENGIFMRNASWSAMAPTSRTFTKVHKLGSVGRSIDVQKFQNYSE 836

Query: 705 LREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDV 764
           LR EL ++F +EG  +DP RSGWQLVFVD END LL+GDDPWE FV+ V  IKILSP ++
Sbjct: 837 LRVELARLFNLEGLLDDPQRSGWQLVFVDNENDTLLVGDDPWEEFVNCVRSIKILSPNEI 896

Query: 765 QKMGEQGVE 773
            +M ++ +E
Sbjct: 897 LQMSQEQLE 905


>gi|168023081|ref|XP_001764067.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162684806|gb|EDQ71206.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 875

 Score =  565 bits (1456), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 284/409 (69%), Positives = 328/409 (80%), Gaps = 10/409 (2%)

Query: 4   DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQV-AATTNKEVDSHIPNYPNLPPQ 62
           + + LNSELWHACAGPLVSLP VG+RVVYFPQGH+EQV AA+T KE D+HIPNYPNLP +
Sbjct: 4   ERRSLNSELWHACAGPLVSLPPVGSRVVYFPQGHTEQVVAASTQKEADAHIPNYPNLPSR 63

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           L+C L NVT+HAD+ETDEVYAQMTL P+ P  +K+  +  ++G+ S+QPT YFCKTLTAS
Sbjct: 64  LVCLLDNVTLHADLETDEVYAQMTLIPVLPANEKEALISPDIGMRSRQPTEYFCKTLTAS 123

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFS+PRRAAEKVFP LD++  PPAQEL ARDLHD EW FRHI+RGQP+RHLLTT
Sbjct: 124 DTSTHGGFSIPRRAAEKVFPPLDYTQTPPAQELKARDLHDQEWHFRHIYRGQPRRHLLTT 183

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWSVFVSAKRL AGD+VLFI ++K QL LGIRR  R  TVMPSSVLSSDSMHIG+LAAA 
Sbjct: 184 GWSVFVSAKRLQAGDAVLFIRDDKGQLQLGIRRQNRQQTVMPSSVLSSDSMHIGVLAAAN 243

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 302
           HAAAT+S FT+F+NPR SPSEFVIP+ KY KA+   +VSVGMRFRM+FETEESSVRRYMG
Sbjct: 244 HAAATSSRFTIFYNPRQSPSEFVIPVAKYQKAICSLQVSVGMRFRMVFETEESSVRRYMG 303

Query: 303 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSLFPLRL 361
           TITG+ DLDP+RW NSHWRS+KVGWDESTAGERQ RVSLWEIEPLTT F + P     R 
Sbjct: 304 TITGMGDLDPIRWPNSHWRSLKVGWDESTAGERQRRVSLWEIEPLTTPFLLCPPPVAFRT 363

Query: 362 KRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQ 410
           KRP           RD T+   ++  G      L  LNF++L M  WM+
Sbjct: 364 KRP--------RGGRDSTSKKSSFWSGDEDTGVLGGLNFRNLSMDSWMR 404



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 56/97 (57%), Positives = 76/97 (78%)

Query: 677 PTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           P RTF KV+K GSVGRS+D+ +F +Y+ELR EL ++F ++   +DP R+GWQLVFVD EN
Sbjct: 738 PVRTFTKVHKLGSVGRSIDVQKFQNYSELRAELARLFNLDNLLDDPQRTGWQLVFVDNEN 797

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVE 773
           D LL+GDDPWE FV+ V  IKILSP ++Q+M ++ +E
Sbjct: 798 DTLLVGDDPWEEFVNYVRSIKILSPNEIQQMRQEQLE 834


>gi|168034767|ref|XP_001769883.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162678789|gb|EDQ65243.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 411

 Score =  555 bits (1430), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 267/364 (73%), Positives = 312/364 (85%), Gaps = 4/364 (1%)

Query: 2   IGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 61
           +G+ + +NSELWHACAGPLVSLP VG++VVYFPQGHSEQVA +T KE D HIPNYPNL P
Sbjct: 30  VGEKR-INSELWHACAGPLVSLPPVGSQVVYFPQGHSEQVAVSTQKEADIHIPNYPNLRP 88

Query: 62  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTA 121
            LIC L NVT+HAD+ETD+VYAQM L P    E++   +P ++ + +KQPT YFCKTLTA
Sbjct: 89  HLICTLENVTLHADLETDDVYAQMVLIPTQDPEKETMLLP-DVVVQNKQPTEYFCKTLTA 147

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFR-GQPKRHLL 180
           SDTSTHGGFS+PRRAAEKVFP+LD++ QPPAQEL+ARDLHD +W FRHI+R GQP+RHLL
Sbjct: 148 SDTSTHGGFSIPRRAAEKVFPTLDYTQQPPAQELVARDLHDQDWHFRHIYRAGQPRRHLL 207

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 240
           TTGWS+F+SAKRL AGD+VLFI ++K QLLLGIRRA R  T+MPSSVLSSDSMHIG+LAA
Sbjct: 208 TTGWSIFISAKRLQAGDAVLFIRDDKGQLLLGIRRANRLQTIMPSSVLSSDSMHIGILAA 267

Query: 241 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 300
           A+HAA T+S FT+F+NPR SPSEFVIP  KY KAV+ T+++VGMRFRM+FETEES+VRRY
Sbjct: 268 ASHAAQTSSRFTIFYNPRQSPSEFVIPSAKYQKAVYSTQITVGMRFRMMFETEESTVRRY 327

Query: 301 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSLFPL 359
           MGT+TGI DLDPVRW NSHWRS+KVGWDESTAGERQ RVSLWEIEPLTT F + P    L
Sbjct: 328 MGTVTGIGDLDPVRWPNSHWRSLKVGWDESTAGERQRRVSLWEIEPLTTPFLICPPPIVL 387

Query: 360 RLKR 363
           R KR
Sbjct: 388 RSKR 391


>gi|302802197|ref|XP_002982854.1| hypothetical protein SELMODRAFT_179736 [Selaginella moellendorffii]
 gi|300149444|gb|EFJ16099.1| hypothetical protein SELMODRAFT_179736 [Selaginella moellendorffii]
          Length = 824

 Score =  555 bits (1429), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 262/365 (71%), Positives = 307/365 (84%), Gaps = 3/365 (0%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G  +  N ELWHACAGPLVSLP+VGTRVVYFPQGHSEQVAA+T KE D+ IP+YPNLPP 
Sbjct: 19  GVKRGPNPELWHACAGPLVSLPSVGTRVVYFPQGHSEQVAASTQKEADADIPSYPNLPPH 78

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           L+CQLHN+T+HAD ETDEVYAQMTLQP++ +E KD+F+  +LG  ++QP+ YFCKTLTAS
Sbjct: 79  LVCQLHNITLHADTETDEVYAQMTLQPMNAQE-KDSFMVSDLGRQNRQPSEYFCKTLTAS 137

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFS+PRRAAEKVFP LDFS QPPAQE++ARDLHD EW+FRHI+RGQP+RHLLTT
Sbjct: 138 DTSTHGGFSIPRRAAEKVFPPLDFSQQPPAQEIVARDLHDTEWRFRHIYRGQPRRHLLTT 197

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWSVFVSAKRL  GD+VLFI +EK QLLLGIRRA R    MP S+LS+DSM+IG+LAAAA
Sbjct: 198 GWSVFVSAKRLQTGDAVLFIRDEKGQLLLGIRRANRQQASMPLSLLSTDSMYIGILAAAA 257

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHT-RVSVGMRFRMLFETEESSVRRYM 301
           HA +T+S FT+F+NPRASPSEFVIPL+KY  AV++  +VS GMRFRM FETEES +RR+ 
Sbjct: 258 HANSTSSRFTIFYNPRASPSEFVIPLSKYYNAVYNNMQVSPGMRFRMQFETEESGIRRHT 317

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSLFPLR 360
           GTI G  DLDPVRW NSHWRS+KV WDE  AGE+Q R+SLWEIEP +T + +    F  R
Sbjct: 318 GTIVGSGDLDPVRWPNSHWRSLKVEWDEPAAGEKQQRISLWEIEPASTPYLVCSPSFTFR 377

Query: 361 LKRPW 365
            KRPW
Sbjct: 378 SKRPW 382



 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 76/168 (45%), Positives = 101/168 (60%), Gaps = 4/168 (2%)

Query: 608 DSQNSVVFGVHIDSSGLLLPTTVSSFTTSVDPGVSSMPLGDSGFHNSMYGCMQDSSELLH 667
           DS++ ++FGV I+   +   T  S    S D     +    S  H S      +    L 
Sbjct: 639 DSRSHLLFGVSIEPECI---TPSSQGPKSKDGQQRVLSSTASDLHLSSDNGTLEEPAYLQ 695

Query: 668 NVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGW 727
                  + P RTF KVYK+GSVGRSLD++R + Y+ LR EL +MFG+EG+ EDP RSGW
Sbjct: 696 RSSSAQHMLP-RTFTKVYKTGSVGRSLDLTRLNCYDGLRSELARMFGLEGQLEDPHRSGW 754

Query: 728 QLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESF 775
           QLVFVD ENDVLL+GDDPWE FVS V  IKI+SP ++  M ++ + + 
Sbjct: 755 QLVFVDNENDVLLVGDDPWEEFVSCVRCIKIMSPAELSHMNQEQLNAI 802


>gi|168028300|ref|XP_001766666.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162682098|gb|EDQ68519.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 369

 Score =  554 bits (1427), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 264/343 (76%), Positives = 303/343 (88%), Gaps = 2/343 (0%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           +NSELWHACAGPLVSLP VG++VVYFPQGHSEQVA +T KE D+HIPNYPNL P L+C L
Sbjct: 1   INSELWHACAGPLVSLPPVGSQVVYFPQGHSEQVAVSTQKEADTHIPNYPNLRPHLVCTL 60

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTH 127
            N+T+HAD+ETDEVYAQM L P S +  K+T +  +  + +KQPT YFCKTLTASDTSTH
Sbjct: 61  DNITLHADLETDEVYAQMVLIP-SQDPDKETMLLPDAVVQNKQPTEYFCKTLTASDTSTH 119

Query: 128 GGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFR-GQPKRHLLTTGWSV 186
           GGFS+PRRAAEKVFP+LD++ QPPAQEL+ARDLHD +W FRHI+R GQP+RHLLTTGWSV
Sbjct: 120 GGFSIPRRAAEKVFPTLDYNQQPPAQELVARDLHDQDWHFRHIYRAGQPRRHLLTTGWSV 179

Query: 187 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 246
           FVSAKRL AGD+VLFI ++K QLLLGIRRA R  T+MPSSVLSSDSMHIG+LAAA+HAA 
Sbjct: 180 FVSAKRLQAGDAVLFIRDDKGQLLLGIRRANRLQTMMPSSVLSSDSMHIGILAAASHAAQ 239

Query: 247 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 306
           T+S FT+F+NPR SPSEFVIPL KY KAV+ T+V+VGMRFRM+FETEES+VRRYMGT+TG
Sbjct: 240 TSSRFTIFYNPRQSPSEFVIPLAKYQKAVYSTQVTVGMRFRMVFETEESTVRRYMGTVTG 299

Query: 307 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT 349
           I DLDPVRW NSHWRS+KVGWDESTAGERQ RVSLWEIEPLTT
Sbjct: 300 IGDLDPVRWPNSHWRSLKVGWDESTAGERQRRVSLWEIEPLTT 342


>gi|242092304|ref|XP_002436642.1| hypothetical protein SORBIDRAFT_10g006440 [Sorghum bicolor]
 gi|241914865|gb|EER88009.1| hypothetical protein SORBIDRAFT_10g006440 [Sorghum bicolor]
          Length = 952

 Score =  552 bits (1422), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 297/486 (61%), Positives = 356/486 (73%), Gaps = 22/486 (4%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ K +NSELWHACAGPLVSLP VG+ VVYFPQGHSEQVAA+ +KE+D+ IP+YP+LP +
Sbjct: 16  GEKKPINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMHKELDT-IPSYPSLPSK 74

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP-SKQPTNYFCKTLTA 121
           LIC+L ++T+HAD ETDEVYAQMTLQP++ +  +D  +  ELG+  +KQPT +FCKTLTA
Sbjct: 75  LICKLLSLTLHADSETDEVYAQMTLQPVN-KYDRDAMLASELGLKQNKQPTEFFCKTLTA 133

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAEK+FP LDF++QPPAQELIA+DLHD+ WKFRHI+RGQPKRHLLT
Sbjct: 134 SDTSTHGGFSVPRRAAEKIFPPLDFTMQPPAQELIAKDLHDISWKFRHIYRGQPKRHLLT 193

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWSVFVS KRL+AGDSVLFI +EK+QLLLGIRRA RP   + SSVLS DSMHIG+LAAA
Sbjct: 194 TGWSVFVSTKRLLAGDSVLFIRDEKSQLLLGIRRASRPQPALSSSVLSCDSMHIGILAAA 253

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           AHAAA +S FT+F+NPRASPSEFVIPL KY KA++ T+VS+GMRFRMLFETE+S VRRYM
Sbjct: 254 AHAAANSSPFTIFYNPRASPSEFVIPLAKYNKALY-TQVSLGMRFRMLFETEDSGVRRYM 312

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRL 361
           GTITGI DLDP+RW NSHWR+++VGWDESTA ER+ RVS+WEIEP+ T P Y  + P   
Sbjct: 313 GTITGIGDLDPLRWKNSHWRNLQVGWDESTASERRTRVSIWEIEPVAT-PFY--ICPPPF 369

Query: 362 KRPWHPSTSSFNDNRDETASGLN----WLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSF 417
            RP  P      D+  E  S       WL      + +    F  L +  WM  +  P  
Sbjct: 370 FRPKLPKQPGMPDDESEVESAFKRAMPWLADDFALKDVQNALFPGLSLVQWMAMQQNPQM 429

Query: 418 LGNDH---NQQYQAMLAAGMQS--GDPVRQQFMQLQQPFQYLQQSGSQNPLQLKQQQHLL 472
           L         QY    A GMQ   G    Q  ++ QQP      SG Q   Q +   H+L
Sbjct: 430 LATAAPAVQSQYLTSNALGMQDGIGSSSDQHKLKEQQP------SGGQAVSQAQLLNHIL 483

Query: 473 QQLNSQ 478
           Q  +SQ
Sbjct: 484 QPSSSQ 489



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 57/93 (61%), Positives = 71/93 (76%)

Query: 679 RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 738
           RTF KV K GSVGRS+DI+R+  Y +LR +L  MFGI+G+ EDP R+ W+LV+VD END+
Sbjct: 838 RTFTKVQKRGSVGRSIDITRYRGYEDLRHDLACMFGIQGQLEDPYRTDWKLVYVDHENDI 897

Query: 739 LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 771
           LL+GDDPWE FVS V  IKILS  +VQ+M   G
Sbjct: 898 LLVGDDPWEEFVSCVKSIKILSSAEVQQMSLDG 930


>gi|168037233|ref|XP_001771109.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162677642|gb|EDQ64110.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 372

 Score =  539 bits (1389), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 271/363 (74%), Positives = 310/363 (85%), Gaps = 2/363 (0%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ + LNSELWHACAGPLVSLP VG+RVVYFPQGH EQVAA+T K+ D+HIPNYP+LP +
Sbjct: 1   GERRSLNSELWHACAGPLVSLPPVGSRVVYFPQGHIEQVAASTQKDADAHIPNYPSLPSK 60

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           +IC L NVT+HAD ETDEVYAQM L P+   E++    P +L + +KQPT YFCKTLTAS
Sbjct: 61  IICLLDNVTLHADPETDEVYAQMILLPIQISEKEALLSP-DLEVVNKQPTEYFCKTLTAS 119

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFS+PRRAAEKVFP LDF+  PPAQEL+ARDLHD EW FRHI+RGQP+RHLLTT
Sbjct: 120 DTSTHGGFSIPRRAAEKVFPPLDFTRVPPAQELVARDLHDQEWHFRHIYRGQPRRHLLTT 179

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWSVFVSAKRL AGDSVLFI ++K  LLLGIRRA R  TVMPSSVLSSDSMH G+LAAA+
Sbjct: 180 GWSVFVSAKRLQAGDSVLFIRDDKGNLLLGIRRANRQQTVMPSSVLSSDSMHFGVLAAAS 239

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 302
           HAAAT+S F +F+NPR SPSEFVIPLTKY KA+++T+ +VGMRFRM+FETEESSVRRY+G
Sbjct: 240 HAAATSSRFKIFYNPRQSPSEFVIPLTKYHKALYNTQFTVGMRFRMVFETEESSVRRYVG 299

Query: 303 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSLFPLRL 361
           TITG+ DLDP+RW  SHWRS+KVGWDESTAGERQ RVSLWEIEPLTT F + P    LR 
Sbjct: 300 TITGLGDLDPIRWPKSHWRSLKVGWDESTAGERQHRVSLWEIEPLTTPFLLCPPPLALRS 359

Query: 362 KRP 364
           KRP
Sbjct: 360 KRP 362


>gi|295844328|gb|ADG43161.1| auxin response factor 27 [Zea mays]
 gi|413952805|gb|AFW85454.1| hypothetical protein ZEAMMB73_050536 [Zea mays]
          Length = 1053

 Score =  536 bits (1380), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 296/487 (60%), Positives = 357/487 (73%), Gaps = 26/487 (5%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ K +NSELWHACAGPLVSLP VG+ VVYFPQGHSEQVAA+ +KE+D+ +P+YP+LP +
Sbjct: 16  GEKKPINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMHKELDT-VPSYPSLPSK 74

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP-SKQPTNYFCKTLTA 121
           LIC+L ++T+HAD ETDEVYAQM LQP++ +  +D  +  ELG+  +KQPT +FCKTLTA
Sbjct: 75  LICKLLSLTLHADSETDEVYAQMMLQPVN-KYDRDAMLASELGLKQNKQPTEFFCKTLTA 133

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAEK+FP LDF++QPPAQELIA+DLHD+ WKFRHI+RGQPKRHLLT
Sbjct: 134 SDTSTHGGFSVPRRAAEKIFPPLDFTMQPPAQELIAKDLHDISWKFRHIYRGQPKRHLLT 193

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWSVFVS KRL+AGDSVLFI +EK+QLLLGIRRA RP   + SSVLSSDSMHIG+LAAA
Sbjct: 194 TGWSVFVSTKRLLAGDSVLFIRDEKSQLLLGIRRASRPQPALSSSVLSSDSMHIGILAAA 253

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           AHAAA +S FT+F+NPRASPSEFVIPL KY KA++ T+VS+GMRFRMLFETE+S VRRYM
Sbjct: 254 AHAAANSSPFTIFYNPRASPSEFVIPLAKYNKALY-TQVSLGMRFRMLFETEDSGVRRYM 312

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRL 361
           GTITGI DLDP+RW NSHWR+++VGWDESTA ER+ RVS+WEIEP+ T P Y  + P   
Sbjct: 313 GTITGIGDLDPLRWKNSHWRNLQVGWDESTASERRTRVSIWEIEPVAT-PFY--ICPPPF 369

Query: 362 KRPWHPSTSSFNDNRDETASGLN----WLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSF 417
            RP  P  +   D+ +E  S       WL      + +    F  L +  WM  +  P  
Sbjct: 370 FRPKLPKQAGMPDDENEVESAFKRAMPWLADDFALKDVQNALFPGLSLVQWMAMQQNPQM 429

Query: 418 LGNDH---NQQYQAMLAAGMQSG------DPVRQQFMQLQQPFQYLQQSGSQ------NP 462
           L         QY    A GMQ G      DP ++  MQ Q       Q+GS+       P
Sbjct: 430 LATASPAVQSQYLTSNALGMQDGIGSVSEDPTKRLTMQAQNIGLPNLQAGSKVDHPAITP 489

Query: 463 LQLKQQQ 469
           L   QQQ
Sbjct: 490 LAQHQQQ 496



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 57/93 (61%), Positives = 71/93 (76%)

Query: 679  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 738
            RTF KV K GSVGRS+DI+R+  Y +LR +L  MFGI+G+ EDP R+ W+LV+VD END+
Sbjct: 939  RTFTKVQKRGSVGRSIDITRYRGYEDLRHDLACMFGIQGQLEDPYRTDWKLVYVDHENDI 998

Query: 739  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 771
            LL+GDDPWE FVS V  IKILS  +VQ+M   G
Sbjct: 999  LLVGDDPWEEFVSCVKSIKILSSVEVQQMSLDG 1031


>gi|357124927|ref|XP_003564148.1| PREDICTED: auxin response factor 16-like [Brachypodium distachyon]
          Length = 1063

 Score =  533 bits (1373), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 279/421 (66%), Positives = 332/421 (78%), Gaps = 11/421 (2%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ K +NSELWHACAGPLV++P VG+ VVYFPQGHSEQVAA+ NKEVD  IPNYP+LP +
Sbjct: 16  GEKKAINSELWHACAGPLVAMPPVGSLVVYFPQGHSEQVAASMNKEVDV-IPNYPSLPSK 74

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP-SKQPTNYFCKTLTA 121
           LIC+L ++T+HAD ETDEVYAQMTLQP+S +  +D  +  ELG+  +KQP  +FCKTLTA
Sbjct: 75  LICKLLSLTLHADSETDEVYAQMTLQPVS-KYDRDAMLASELGLKQNKQPMEFFCKTLTA 133

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAEK+FP LDF++QPPAQEL+A+DLHD+ WKFRHIFRGQPKRHLLT
Sbjct: 134 SDTSTHGGFSVPRRAAEKIFPPLDFAMQPPAQELMAKDLHDISWKFRHIFRGQPKRHLLT 193

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWSVFVS KRL+AGDSVLFI +EK+QLLLGIRR+ RP   + SSVLSSDSMHIG+LAAA
Sbjct: 194 TGWSVFVSTKRLLAGDSVLFIRDEKSQLLLGIRRSTRPQPALSSSVLSSDSMHIGILAAA 253

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           AHAAA +S FT+F+NPRASPSEFVIPL KY KA++ T+VS+GMRFRMLFETE+S VRRYM
Sbjct: 254 AHAAANSSPFTIFYNPRASPSEFVIPLAKYNKALY-TQVSLGMRFRMLFETEDSGVRRYM 312

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRL 361
           GTITGI DLDPVRW NSHWR+++VGWDESTA ER+ RVS+WEIEP+ T P Y  + P   
Sbjct: 313 GTITGIGDLDPVRWKNSHWRNLQVGWDESTASERRTRVSIWEIEPVAT-PFY--ICPPPF 369

Query: 362 KRPWHPSTSSFNDNRDETASGLN----WLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSF 417
            RP  P      D+ +E  S       WL      + + +  F  L +  WM  +  P  
Sbjct: 370 FRPKLPKQPGMPDDENEVESAFKRAMPWLADDFALKDVQSQLFPGLSLVQWMAMQQNPQM 429

Query: 418 L 418
           L
Sbjct: 430 L 430



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 61/107 (57%), Positives = 77/107 (71%)

Query: 679  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 738
            RTF KV K GSVGRS+DI+R+ +Y+ELR +L  MFGI+G+ EDP R  W+LV+VD END+
Sbjct: 947  RTFTKVQKRGSVGRSIDITRYRNYDELRHDLACMFGIQGQLEDPYRMDWKLVYVDHENDI 1006

Query: 739  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANS 785
            LL+GDDPWE FVS V  IKILS  +VQ+M   G     PS  Q  ++
Sbjct: 1007 LLVGDDPWEEFVSCVKSIKILSSVEVQQMSLDGDLGGIPSQTQACSA 1053


>gi|158513349|sp|A3B9A0.1|ARFP_ORYSJ RecName: Full=Auxin response factor 16
 gi|125596359|gb|EAZ36139.1| hypothetical protein OsJ_20449 [Oryza sativa Japonica Group]
          Length = 1055

 Score =  531 bits (1369), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 278/421 (66%), Positives = 332/421 (78%), Gaps = 11/421 (2%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ K +NSELWHACAGPLVSLP VG+ VVYFPQGHSEQVAA+ +KE+D +IP YP+LP +
Sbjct: 16  GEKKAINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMHKELD-NIPGYPSLPSK 74

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP-SKQPTNYFCKTLTA 121
           LIC+L ++T+HAD ETDEVYAQMTLQP++ +  +D  +  ELG+  +KQP  +FCKTLTA
Sbjct: 75  LICKLLSLTLHADSETDEVYAQMTLQPVN-KYDRDAMLASELGLKQNKQPAEFFCKTLTA 133

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAEK+FP LDF++QPPAQELIA+DLHD+ WKFRHI+RGQPKRHLLT
Sbjct: 134 SDTSTHGGFSVPRRAAEKIFPPLDFTMQPPAQELIAKDLHDISWKFRHIYRGQPKRHLLT 193

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWSVFVS KRL+AGDSVLFI +EK+QLLLGIRRA RP   + SSVLSSDSMHIG+LAAA
Sbjct: 194 TGWSVFVSTKRLLAGDSVLFIRDEKSQLLLGIRRATRPQPALSSSVLSSDSMHIGILAAA 253

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           AHAAA +S FT+F+NPRASPSEFVIPL KY KA++ T+VS+GMRFRMLFETE+S VRRYM
Sbjct: 254 AHAAANSSPFTIFYNPRASPSEFVIPLAKYNKALY-TQVSLGMRFRMLFETEDSGVRRYM 312

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRL 361
           GTITGI DLDPVRW NSHWR+++VGWDESTA ER+ RVS+WEIEP+ T P Y  + P   
Sbjct: 313 GTITGIGDLDPVRWKNSHWRNLQVGWDESTASERRTRVSIWEIEPVAT-PFY--ICPPPF 369

Query: 362 KRPWHPSTSSFNDNRDETASGLN----WLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSF 417
            RP  P      D+ +E  S       WL      + + +  F  L +  WM  +  P  
Sbjct: 370 FRPKLPKQPGMPDDENEVESAFKRAMPWLADDFALKDVQSALFPGLSLVQWMAMQQNPQM 429

Query: 418 L 418
           L
Sbjct: 430 L 430



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 57/93 (61%), Positives = 70/93 (75%)

Query: 679  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 738
            RTF KV K GSVGRS+DI+R+  Y+ELR +L  MFGI+G+ EDP R  W+LV+VD END+
Sbjct: 940  RTFTKVQKRGSVGRSIDITRYRDYDELRHDLACMFGIQGQLEDPYRMDWKLVYVDHENDI 999

Query: 739  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 771
            LL+GDDPWE FV  V  IKILS  +VQ+M   G
Sbjct: 1000 LLVGDDPWEEFVGCVKSIKILSAAEVQQMSLDG 1032


>gi|158512935|sp|A2YAA5.1|ARFP_ORYSI RecName: Full=Auxin response factor 16
 gi|125554410|gb|EAZ00016.1| hypothetical protein OsI_22015 [Oryza sativa Indica Group]
          Length = 1055

 Score =  530 bits (1364), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 277/421 (65%), Positives = 331/421 (78%), Gaps = 11/421 (2%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ K +NSELWHACAGPLVSLP VG+ VVYFPQGHSEQVAA+ +KE+D +IP YP+LP +
Sbjct: 16  GEKKAINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMHKELD-NIPGYPSLPSK 74

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP-SKQPTNYFCKTLTA 121
           LIC+L ++T+HAD ETDEVY QMTLQP++ +  +D  +  ELG+  +KQP  +FCKTLTA
Sbjct: 75  LICKLLSLTLHADSETDEVYVQMTLQPVN-KYDRDAMLASELGLKQNKQPAEFFCKTLTA 133

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAEK+FP LDF++QPPAQELIA+DLHD+ WKFRHI+RGQPKRHLLT
Sbjct: 134 SDTSTHGGFSVPRRAAEKIFPPLDFTMQPPAQELIAKDLHDISWKFRHIYRGQPKRHLLT 193

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWSVFVS KRL+AGDSVLFI +EK+QLLLGIRRA RP   + SSVLSSDSMHIG+LAAA
Sbjct: 194 TGWSVFVSTKRLLAGDSVLFIRDEKSQLLLGIRRATRPQPALSSSVLSSDSMHIGILAAA 253

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           AHAAA +S FT+F+NPRASPSEFVIPL KY KA++ T+VS+GMRFRMLFETE+S VRRYM
Sbjct: 254 AHAAANSSPFTIFYNPRASPSEFVIPLAKYNKALY-TQVSLGMRFRMLFETEDSGVRRYM 312

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRL 361
           GTITGI DLDPVRW NSHWR+++VGWDESTA ER+ RVS+WEIEP+ T P Y  + P   
Sbjct: 313 GTITGIGDLDPVRWKNSHWRNLQVGWDESTASERRTRVSIWEIEPVAT-PFY--ICPPPF 369

Query: 362 KRPWHPSTSSFNDNRDETASGLN----WLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSF 417
            RP  P      D+ +E  S       WL      + + +  F  L +  WM  +  P  
Sbjct: 370 FRPKLPKQPGMPDDENEVESAFKRAMPWLADDFALKDVQSALFPGLSLVQWMAMQQNPQM 429

Query: 418 L 418
           L
Sbjct: 430 L 430



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 57/93 (61%), Positives = 70/93 (75%)

Query: 679  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 738
            RTF KV K GSVGRS+DI+R+  Y+ELR +L  MFGI+G+ EDP R  W+LV+VD END+
Sbjct: 940  RTFTKVQKRGSVGRSIDITRYRDYDELRHDLACMFGIQGQLEDPYRMDWKLVYVDHENDI 999

Query: 739  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 771
            LL+GDDPWE FV  V  IKILS  +VQ+M   G
Sbjct: 1000 LLVGDDPWEEFVGCVKSIKILSAAEVQQMSLDG 1032


>gi|326487574|dbj|BAK05459.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 970

 Score =  528 bits (1361), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 285/443 (64%), Positives = 339/443 (76%), Gaps = 14/443 (3%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ K +NSELWHAC+GPLV++P VG+ VVYFPQGHSEQVAA+ +KEVD  IPNYP+LP +
Sbjct: 16  GEKKAINSELWHACSGPLVAMPPVGSLVVYFPQGHSEQVAASMHKEVDI-IPNYPSLPSK 74

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP-SKQPTNYFCKTLTA 121
           LIC+L ++T+HAD ETDEVYAQMTLQP++ +  +D  +  ELG+  +KQP  +FCKTLTA
Sbjct: 75  LICKLLSLTLHADSETDEVYAQMTLQPVN-KYDRDAMLASELGLKQNKQPVEFFCKTLTA 133

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAEK+FP LDF++QPPAQEL+A+DLHD+ WKFRHIFRGQPKRHLLT
Sbjct: 134 SDTSTHGGFSVPRRAAEKIFPPLDFTMQPPAQELMAKDLHDIPWKFRHIFRGQPKRHLLT 193

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWSVFVS KRL+AGDSVLFI +EK+QLLLGIRRA RP   + SSVLSSDSMHIG+LAAA
Sbjct: 194 TGWSVFVSTKRLLAGDSVLFIRDEKSQLLLGIRRATRPQPALSSSVLSSDSMHIGILAAA 253

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           AHAAA +S FT+F+NPRASPSEFVIPL KY KA++ T+VS+GMRFRMLFETE+S VRRYM
Sbjct: 254 AHAAANSSPFTIFYNPRASPSEFVIPLAKYNKALY-TQVSLGMRFRMLFETEDSGVRRYM 312

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRL 361
           GTITGI DLDPVRW NSHWR+++VGWDESTA ER+ RVS+WEIEP+ T P Y  + P   
Sbjct: 313 GTITGIGDLDPVRWKNSHWRNLQVGWDESTASERRTRVSIWEIEPVAT-PFY--ICPPPF 369

Query: 362 KRPWHPSTSSFNDNRDETASGLN----WLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSF 417
            RP  P      D+  E  S       WL      + + +  F  L +  WM  +  P  
Sbjct: 370 FRPKLPKQPGMPDDESEVDSAFKRAMPWLGDDFALKDVQSQLFPGLSLVQWMAMQQNPQM 429

Query: 418 L--GNDHNQQ-YQAMLAAGMQSG 437
           L  G    Q  Y    A GMQ G
Sbjct: 430 LPAGAPAVQAPYLNSSAMGMQDG 452


>gi|225444647|ref|XP_002276637.1| PREDICTED: auxin response factor 19-like [Vitis vinifera]
          Length = 1084

 Score =  527 bits (1358), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 276/412 (66%), Positives = 322/412 (78%), Gaps = 11/412 (2%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ K +NSELWHACAGPLVSLP VG+ VVYFPQGHSEQVAA+  KE +  +P+YPNLP +
Sbjct: 15  GERKSINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKETEC-VPSYPNLPSK 73

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP-SKQPTNYFCKTLTA 121
           LIC LHNVT+HAD ETDEVYAQMTLQP+S +  K+  +  +LG+  S+QP  +FCKTLTA
Sbjct: 74  LICMLHNVTLHADAETDEVYAQMTLQPVS-KYDKEALLASDLGLKQSRQPVEFFCKTLTA 132

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAEK+FP LDFS+QPPAQE++ARDLHD  W FRHI+RGQPKRHLLT
Sbjct: 133 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVARDLHDNTWTFRHIYRGQPKRHLLT 192

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWSVFVS KRL AGDSVLFI +EK+QLLLGIRRA R    + SSV+S DSMHIG+LAAA
Sbjct: 193 TGWSVFVSTKRLFAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVISCDSMHIGILAAA 252

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           AHAAA NS FT+F+NPRASPSEFVIPL KY KA++ T+VS+GMRFRM+FETEES VRRYM
Sbjct: 253 AHAAANNSPFTIFYNPRASPSEFVIPLAKYNKAMY-TQVSLGMRFRMMFETEESGVRRYM 311

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRL 361
           GTITGIS+LD  RW NS WR+++VGWDESTAGER  RVS+WEIEP+ T P Y  L P   
Sbjct: 312 GTITGISELDAARWKNSQWRNLQVGWDESTAGERPSRVSIWEIEPVVT-PFY--LCPPPF 368

Query: 362 KRPWHPSTSSFNDNRDETAS----GLNWLRGGTGEQGLTTLNFQSLGMFPWM 409
            RP  P    F D+  +  S    G+ WL    G +   +  F  L +  WM
Sbjct: 369 FRPKFPKQPGFPDDESDIESAFKRGMPWLGDDFGMKDAPSSIFPGLNLVQWM 420



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 63/119 (52%), Positives = 82/119 (68%), Gaps = 4/119 (3%)

Query: 657  GCMQD----SSELLHNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQM 712
            GC  D     + +L N    +Q    RT+ KV K GSVGRS+D++R+  Y+ELR +L +M
Sbjct: 931  GCSNDVAITETGVLSNGLWTNQAQRMRTYTKVQKRGSVGRSIDVTRYKGYDELRHDLARM 990

Query: 713  FGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 771
            FGIEG+ EDP R+ W+LV+VD END+LL+GDDPWE FVS V  IKILS  +VQ+M   G
Sbjct: 991  FGIEGQLEDPQRTDWKLVYVDHENDILLVGDDPWEEFVSCVQSIKILSSAEVQQMSLDG 1049


>gi|224069204|ref|XP_002326300.1| predicted protein [Populus trichocarpa]
 gi|222833493|gb|EEE71970.1| predicted protein [Populus trichocarpa]
          Length = 1057

 Score =  526 bits (1354), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 267/352 (75%), Positives = 306/352 (86%), Gaps = 5/352 (1%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ KC+NSELWHACAGPLVSLP VG+ VVYFPQGHSEQVAA+  KE D  IP+YPNLP +
Sbjct: 15  GERKCINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKETD-FIPSYPNLPSK 73

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP-SKQPTNYFCKTLTA 121
           LIC LHNVT+HADVETDEVYAQMTLQP+S  E K+  +  ++G+  ++QPT +FCKTLTA
Sbjct: 74  LICMLHNVTLHADVETDEVYAQMTLQPVSKYE-KEALLASDMGLKQNRQPTEFFCKTLTA 132

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAEK+FP LDFS+QPPAQEL+ARDLHD  W FRHI+RGQPKRHLLT
Sbjct: 133 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVARDLHDNTWTFRHIYRGQPKRHLLT 192

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWSVFVS KRL AGDSVLFI +EK+QLLLGIRRA R    + SSV+SSDSMHIG+LAAA
Sbjct: 193 TGWSVFVSTKRLFAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVISSDSMHIGILAAA 252

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           AHAAA NS FT+F+NPRASPSEFVIP +KY KA++ T+VS+GMRFRM+FETEES VRRYM
Sbjct: 253 AHAAANNSPFTIFYNPRASPSEFVIPFSKYNKALY-TQVSLGMRFRMMFETEESGVRRYM 311

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMY 353
           GTITGISD+DPVRW NS WR+++VGWDESTAGER  RVS+WEIEP+ T P Y
Sbjct: 312 GTITGISDMDPVRWKNSQWRNLQVGWDESTAGERPSRVSIWEIEPVVT-PFY 362



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 65/122 (53%), Positives = 83/122 (68%), Gaps = 7/122 (5%)

Query: 657  GCMQD----SSELLHN---VGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREEL 709
            GC  D     + +L+N     Q +Q    RT+ KV K GSVGRS+D++R+  YNELR +L
Sbjct: 901  GCSNDVAINDTGVLNNGLWTNQTNQTQRMRTYTKVQKRGSVGRSIDVTRYKGYNELRHDL 960

Query: 710  GQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGE 769
             +MFGIEG+ EDP  S W+LV+VD END+LL+GDDPWE FVS V  IKILS  +VQ+M  
Sbjct: 961  ARMFGIEGQLEDPQSSDWKLVYVDHENDILLVGDDPWEEFVSCVQSIKILSSAEVQQMSL 1020

Query: 770  QG 771
             G
Sbjct: 1021 DG 1022


>gi|297736017|emb|CBI24055.3| unnamed protein product [Vitis vinifera]
          Length = 1034

 Score =  525 bits (1353), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 263/366 (71%), Positives = 304/366 (83%), Gaps = 2/366 (0%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ K +N ELW ACAGPLV+LP  GT VVYFPQGHSEQVAA+  K+VD+ IPNYPNLP +
Sbjct: 21  GEKKSINPELWQACAGPLVNLPPAGTLVVYFPQGHSEQVAASMKKDVDAQIPNYPNLPSR 80

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQP-TNYFCKTLTA 121
           L+C LHNVT+HAD ETDEVYAQMTLQP+ P   K++ +  +L + + +P T++FCKTLTA
Sbjct: 81  LLCILHNVTLHADPETDEVYAQMTLQPV-PAYDKESLLRSDLALKTNKPQTDFFCKTLTA 139

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAEK+FP LDFS+QPPAQEL+A+DLHD  W FRHI+RGQPKRHLLT
Sbjct: 140 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVAKDLHDNVWTFRHIYRGQPKRHLLT 199

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWS+FVS KRL AGD+VLFI +EK QLLLGIRRA R PT + SSVLSSDSMHIG+LAAA
Sbjct: 200 TGWSLFVSGKRLFAGDAVLFIRDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAA 259

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           AHAAA NS FTVF+NPRASPSEFVIPL KY KA +  ++S+GMRFRM+FETEES  RRYM
Sbjct: 260 AHAAANNSPFTVFYNPRASPSEFVIPLAKYYKAAYSNQISLGMRFRMMFETEESGTRRYM 319

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRL 361
           GTITGISDLDPVRW NS WR+++VGWDESTAGER+ RVS+WEIEP+T           R 
Sbjct: 320 GTITGISDLDPVRWKNSQWRNLQVGWDESTAGERRNRVSIWEIEPVTAPFFICPPPFFRS 379

Query: 362 KRPWHP 367
           KRP  P
Sbjct: 380 KRPRQP 385



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 67/122 (54%), Positives = 87/122 (71%), Gaps = 5/122 (4%)

Query: 653  NSMYGCMQDSSELLHNVGQ---IDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREEL 709
            NS+   + DSS L  N G      Q    RT+ KVYK G+VGRS+DI+R+S Y+EL+++L
Sbjct: 895  NSIDSAINDSSFL--NRGPWAPAPQFQRMRTYTKVYKRGAVGRSIDITRYSGYDELKQDL 952

Query: 710  GQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGE 769
             + FGIEG+ ED  R GW+LV+VD ENDVLL+GDDPWE FV+ V  IKILSP++VQ+M  
Sbjct: 953  ARRFGIEGQLEDRQRIGWKLVYVDHENDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMSL 1012

Query: 770  QG 771
             G
Sbjct: 1013 DG 1014


>gi|359484941|ref|XP_002266603.2| PREDICTED: auxin response factor 5-like [Vitis vinifera]
          Length = 1117

 Score =  525 bits (1352), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 263/366 (71%), Positives = 304/366 (83%), Gaps = 2/366 (0%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ K +N ELW ACAGPLV+LP  GT VVYFPQGHSEQVAA+  K+VD+ IPNYPNLP +
Sbjct: 23  GEKKSINPELWQACAGPLVNLPPAGTLVVYFPQGHSEQVAASMKKDVDAQIPNYPNLPSR 82

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQP-TNYFCKTLTA 121
           L+C LHNVT+HAD ETDEVYAQMTLQP+ P   K++ +  +L + + +P T++FCKTLTA
Sbjct: 83  LLCILHNVTLHADPETDEVYAQMTLQPV-PAYDKESLLRSDLALKTNKPQTDFFCKTLTA 141

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAEK+FP LDFS+QPPAQEL+A+DLHD  W FRHI+RGQPKRHLLT
Sbjct: 142 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVAKDLHDNVWTFRHIYRGQPKRHLLT 201

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWS+FVS KRL AGD+VLFI +EK QLLLGIRRA R PT + SSVLSSDSMHIG+LAAA
Sbjct: 202 TGWSLFVSGKRLFAGDAVLFIRDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAA 261

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           AHAAA NS FTVF+NPRASPSEFVIPL KY KA +  ++S+GMRFRM+FETEES  RRYM
Sbjct: 262 AHAAANNSPFTVFYNPRASPSEFVIPLAKYYKAAYSNQISLGMRFRMMFETEESGTRRYM 321

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRL 361
           GTITGISDLDPVRW NS WR+++VGWDESTAGER+ RVS+WEIEP+T           R 
Sbjct: 322 GTITGISDLDPVRWKNSQWRNLQVGWDESTAGERRNRVSIWEIEPVTAPFFICPPPFFRS 381

Query: 362 KRPWHP 367
           KRP  P
Sbjct: 382 KRPRQP 387



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 67/122 (54%), Positives = 87/122 (71%), Gaps = 5/122 (4%)

Query: 653  NSMYGCMQDSSELLHNVGQ---IDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREEL 709
            NS+   + DSS L  N G      Q    RT+ KVYK G+VGRS+DI+R+S Y+EL+++L
Sbjct: 978  NSIDSAINDSSFL--NRGPWAPAPQFQRMRTYTKVYKRGAVGRSIDITRYSGYDELKQDL 1035

Query: 710  GQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGE 769
             + FGIEG+ ED  R GW+LV+VD ENDVLL+GDDPWE FV+ V  IKILSP++VQ+M  
Sbjct: 1036 ARRFGIEGQLEDRQRIGWKLVYVDHENDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMSL 1095

Query: 770  QG 771
             G
Sbjct: 1096 DG 1097


>gi|255557566|ref|XP_002519813.1| Auxin response factor, putative [Ricinus communis]
 gi|223541052|gb|EEF42609.1| Auxin response factor, putative [Ricinus communis]
          Length = 1109

 Score =  525 bits (1351), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 265/365 (72%), Positives = 300/365 (82%), Gaps = 2/365 (0%)

Query: 4   DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQL 63
           + K +N ELW ACAGPLVSLP  GT VVYFPQGHSEQVAA+  K+VD+ IPNYPNLP +L
Sbjct: 28  EKKSINQELWQACAGPLVSLPAAGTHVVYFPQGHSEQVAASMKKDVDAQIPNYPNLPSKL 87

Query: 64  ICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQP-TNYFCKTLTAS 122
            C LHNVT+HAD ETDEVYAQMTLQP+ P   KD  +  +L + S +P T++FCKTLTAS
Sbjct: 88  FCLLHNVTLHADPETDEVYAQMTLQPV-PSFDKDALLRSDLTLKSNKPQTDFFCKTLTAS 146

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSVPRRAAEK+FP LDFS+QPPAQEL+ARDLHD  W FRHI+RGQPKRHLLTT
Sbjct: 147 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVARDLHDNIWTFRHIYRGQPKRHLLTT 206

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWS+FVS KRL AGDSVLFI ++K QLLLGIRRA R P  + SSVLSSDSMHIG+LAAAA
Sbjct: 207 GWSLFVSGKRLFAGDSVLFIRDDKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 266

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 302
           HAAA NS FTVF+NPRASPSEFVIPL KY KAV   ++S+GMRFRM+FETEES  RRYMG
Sbjct: 267 HAAANNSPFTVFYNPRASPSEFVIPLAKYYKAVCSNQISLGMRFRMMFETEESGTRRYMG 326

Query: 303 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 362
           TITGISDLDPVRW NS WR+++VGWDESTAGE++ RVS+WEIEP+T           R K
Sbjct: 327 TITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSK 386

Query: 363 RPWHP 367
           RP  P
Sbjct: 387 RPRQP 391



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 58/93 (62%), Positives = 75/93 (80%)

Query: 679  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 738
            RT+ KVYK G+VGRS+DI+R+S Y EL+++L + FGIEG+ ED  R GW+LV+VD ENDV
Sbjct: 997  RTYTKVYKRGAVGRSIDITRYSGYVELKQDLARRFGIEGQLEDRQRIGWKLVYVDHENDV 1056

Query: 739  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 771
            LL+GDDPWE FV+ V  IKILSP++VQ+M   G
Sbjct: 1057 LLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDG 1089


>gi|297738525|emb|CBI27770.3| unnamed protein product [Vitis vinifera]
          Length = 878

 Score =  524 bits (1350), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 276/412 (66%), Positives = 322/412 (78%), Gaps = 11/412 (2%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ K +NSELWHACAGPLVSLP VG+ VVYFPQGHSEQVAA+  KE +  +P+YPNLP +
Sbjct: 15  GERKSINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKETEC-VPSYPNLPSK 73

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP-SKQPTNYFCKTLTA 121
           LIC LHNVT+HAD ETDEVYAQMTLQP+S +  K+  +  +LG+  S+QP  +FCKTLTA
Sbjct: 74  LICMLHNVTLHADAETDEVYAQMTLQPVS-KYDKEALLASDLGLKQSRQPVEFFCKTLTA 132

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAEK+FP LDFS+QPPAQE++ARDLHD  W FRHI+RGQPKRHLLT
Sbjct: 133 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVARDLHDNTWTFRHIYRGQPKRHLLT 192

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWSVFVS KRL AGDSVLFI +EK+QLLLGIRRA R    + SSV+S DSMHIG+LAAA
Sbjct: 193 TGWSVFVSTKRLFAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVISCDSMHIGILAAA 252

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           AHAAA NS FT+F+NPRASPSEFVIPL KY KA++ T+VS+GMRFRM+FETEES VRRYM
Sbjct: 253 AHAAANNSPFTIFYNPRASPSEFVIPLAKYNKAMY-TQVSLGMRFRMMFETEESGVRRYM 311

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRL 361
           GTITGIS+LD  RW NS WR+++VGWDESTAGER  RVS+WEIEP+ T P Y  L P   
Sbjct: 312 GTITGISELDAARWKNSQWRNLQVGWDESTAGERPSRVSIWEIEPVVT-PFY--LCPPPF 368

Query: 362 KRPWHPSTSSFNDNRDETAS----GLNWLRGGTGEQGLTTLNFQSLGMFPWM 409
            RP  P    F D+  +  S    G+ WL    G +   +  F  L +  WM
Sbjct: 369 FRPKFPKQPGFPDDESDIESAFKRGMPWLGDDFGMKDAPSSIFPGLNLVQWM 420


>gi|357479369|ref|XP_003609970.1| Auxin response factor [Medicago truncatula]
 gi|355511025|gb|AES92167.1| Auxin response factor [Medicago truncatula]
          Length = 1120

 Score =  521 bits (1341), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 272/420 (64%), Positives = 326/420 (77%), Gaps = 7/420 (1%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ K +NSELWHACAGPLVSLP VG+ VVYFPQGHSEQVAA+  K+ D  IP+YPNLP +
Sbjct: 15  GERKTINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKQTD-FIPSYPNLPSK 73

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP-SKQPTNYFCKTLTA 121
           LIC LHNV +HAD ETDEVYAQMTLQP++ +  KD  +  + G+  ++QPT +FCKTLTA
Sbjct: 74  LICMLHNVALHADPETDEVYAQMTLQPVN-KYDKDAILASDFGLKQNRQPTEFFCKTLTA 132

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAEK+FP LDFS+QPPAQEL+A+DLHD  W FRHI+RGQPKRHLLT
Sbjct: 133 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVAKDLHDNTWAFRHIYRGQPKRHLLT 192

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWSVF+S KRL AGDSVLFI +EK QLLLG+RRA R    + SSV+SSDSMHIG+LAAA
Sbjct: 193 TGWSVFISTKRLFAGDSVLFIRDEKQQLLLGLRRANRQQPALSSSVISSDSMHIGILAAA 252

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           AHAAA NS FT+++NPRASPSEFV+PL KY KA++ T+VS+GMRFRM+FETEES VRRYM
Sbjct: 253 AHAAANNSPFTIYYNPRASPSEFVVPLAKYNKAMY-TQVSLGMRFRMMFETEESGVRRYM 311

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSLFPLR 360
           GT+TGISDLDPVRW NS WR+++VGWDESTAGER  RVS+W+IEP+ T F + P  F  R
Sbjct: 312 GTVTGISDLDPVRWKNSQWRNLQVGWDESTAGERPSRVSIWDIEPVVTPFYICPPPF-FR 370

Query: 361 LKRPWHPST-SSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLG 419
              P HP      +D  +     + WL    G +  ++  F  L +  WM  + +  F G
Sbjct: 371 QNFPGHPGMPDDGSDVENSFKRAMPWLGDDFGMKDASSSVFPGLSLVQWMSMQQKNQFSG 430



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 69/150 (46%), Positives = 95/150 (63%), Gaps = 8/150 (5%)

Query: 627  PTTVSSFTTSVDPGVSSMPLGDSGFHNSMYGC-----MQDSSELLHNVGQIDQLTPTRTF 681
            P  + +  ++ D    S  L D  F     GC     + D+S +L+N  + +Q    RT+
Sbjct: 939  PRDIETELSTADISSQSFGLPDMSFKP---GCSNDVGINDTSGVLNNGLRANQNQRMRTY 995

Query: 682  VKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLL 741
             KV K GSVGR +D++R+  Y+ELR +L +MFGIEG+ EDP R+ W+LV+VD END+LL+
Sbjct: 996  TKVQKRGSVGRCIDVTRYKGYDELRYDLARMFGIEGQLEDPQRTDWKLVYVDHENDILLV 1055

Query: 742  GDDPWEAFVSNVWYIKILSPEDVQKMGEQG 771
            GDDPWE FVS V  IKILS  +VQ+M   G
Sbjct: 1056 GDDPWEEFVSCVQSIKILSSAEVQQMSLDG 1085


>gi|350536075|ref|NP_001234740.1| auxin response factor 19 [Solanum lycopersicum]
 gi|298570957|gb|ADI87602.1| auxin response factor 19 [Solanum lycopersicum]
 gi|307091363|gb|ADN28050.1| auxin response factor 19 [Solanum lycopersicum]
          Length = 1112

 Score =  518 bits (1335), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 302/527 (57%), Positives = 363/527 (68%), Gaps = 30/527 (5%)

Query: 4   DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQL 63
           + K +N ELW ACAGPLV+LP  GT VVYFPQGHSEQVAA+  K+VD+ IPNYPNLP +L
Sbjct: 24  EKKSINPELWQACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDVDAQIPNYPNLPSKL 83

Query: 64  ICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQP-TNYFCKTLTAS 122
           +C LHN+T+HAD E DEVYAQMTLQP+ P   K+  +  +L + + +P T +FCKTLTAS
Sbjct: 84  VCLLHNITLHADPEADEVYAQMTLQPV-PSFDKEALLRSDLSMKANKPQTEFFCKTLTAS 142

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSVPRR+AEK+FP LD+S+QPPAQEL+ARDLHD  W FRHI+RGQPKRHLLTT
Sbjct: 143 DTSTHGGFSVPRRSAEKIFPPLDYSMQPPAQELVARDLHDNLWTFRHIYRGQPKRHLLTT 202

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWS+FVS KRL AGDSVLFI +EK QLLLGIRRA R PT + SSVLSSDSMHIG+LAAAA
Sbjct: 203 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAA 262

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 302
           HAAA NS FTVF+NPRAS SEFVIPL KY KA + ++VS+GMRFRM+FETEES  RRYMG
Sbjct: 263 HAAANNSPFTVFYNPRASHSEFVIPLAKYYKATYSSQVSLGMRFRMMFETEESGTRRYMG 322

Query: 303 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSLFPLRL 361
           TITGISDLDPVRW NS WR+++VGWDESTAGER+ RVS+WEIEP+T  F + P+    R 
Sbjct: 323 TITGISDLDPVRWKNSQWRNLQVGWDESTAGERRNRVSIWEIEPVTAPFFICPTPPFFRS 382

Query: 362 KRPWHPSTSSFNDNRDETASGLN--------WLR---GGTGEQGLTTLNFQSLGMFPWMQ 410
           KRP  P         D+  S L+        WL    G    QGL       L +  WM 
Sbjct: 383 KRPRLPGMP------DDDCSDLDGLFKRTMPWLGDDFGMKDPQGLP-----GLSLVQWMN 431

Query: 411 QRVEPSFLGNDHNQQYQAMLAAGMQS----GDPVRQQFMQLQQ-PFQYLQQSGSQNPLQL 465
            +  PS   +       ++  + +Q+     D  RQ  +   Q P Q   Q GSQ P Q 
Sbjct: 432 MQQNPSLANSMQPNYLHSLSGSVLQNVGGGADLSRQLCLPAPQLPQQNTLQFGSQRPTQQ 491

Query: 466 KQQQHLLQQLNSQAEDRAQQQQQPQQHMYHDALQIRTDELLQRQQSN 512
            QQ   LQ++ +     A    QPQQ +   + Q R + + Q   +N
Sbjct: 492 VQQLDQLQKIPTTTLSPAGSIMQPQQQLSDISQQPRQNLINQSVPTN 538



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 58/98 (59%), Positives = 77/98 (78%)

Query: 674  QLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVD 733
            Q+   RTF KV+K G+VGRS+DI+R+S Y EL+++L + FGIEG+ ED  R GW+LV+VD
Sbjct: 996  QMPRMRTFTKVHKRGAVGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVD 1055

Query: 734  RENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 771
             ENDVLL+GDDPWE FV+ V  IKILSP++VQ++   G
Sbjct: 1056 HENDVLLVGDDPWEEFVNCVRCIKILSPQEVQQISLDG 1093


>gi|255550359|ref|XP_002516230.1| Auxin response factor, putative [Ricinus communis]
 gi|223544716|gb|EEF46232.1| Auxin response factor, putative [Ricinus communis]
          Length = 1119

 Score =  518 bits (1333), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 278/422 (65%), Positives = 326/422 (77%), Gaps = 11/422 (2%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ K +NSELWHACAGPLV+LP VG+ VVYFPQGHSEQVAA+  KE D  IP+YPNLP +
Sbjct: 15  GERKSINSELWHACAGPLVALPPVGSLVVYFPQGHSEQVAASMQKETD-FIPSYPNLPSK 73

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP-SKQPTNYFCKTLTA 121
           LIC LHNVT+HAD ETDEVYAQMTLQP++ +  K+  +  ++G+  S+QPT +FCKTLTA
Sbjct: 74  LICMLHNVTLHADAETDEVYAQMTLQPVN-KYDKEALLASDMGLKQSRQPTEFFCKTLTA 132

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAEK+FP LDFS+QPPAQEL+ARDLHD  W FRHI+RGQPKRHLLT
Sbjct: 133 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVARDLHDNTWTFRHIYRGQPKRHLLT 192

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWSVFVS KRL AGDSVLFI +EK+QLLLGIRRA R    + SSV+SSDSMHIG+LAAA
Sbjct: 193 TGWSVFVSTKRLFAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVISSDSMHIGILAAA 252

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           AHAAA NS FT+F+NPRASPSEFVIP +KY KA++ T+VS+GMRFRM+FETEES VRRYM
Sbjct: 253 AHAAANNSPFTIFYNPRASPSEFVIPFSKYNKAMY-TQVSLGMRFRMMFETEESGVRRYM 311

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMY----PSLF 357
           GTITGISDLDPVRW  S WR+++VGWDESTAGER  RVS+WE+EP+ T P Y    P   
Sbjct: 312 GTITGISDLDPVRWKTSQWRNLQVGWDESTAGERPSRVSIWEVEPVVT-PFYICPPPFFR 370

Query: 358 PLRLKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSF 417
           P   K+P  P   S  D  +     + WL    G +   +  F  L +  WM  +    F
Sbjct: 371 PKFPKQPGMPDDES--DIENAFKRAMPWLGDDFGLKDTQSSIFPGLSLVQWMSMQQNNQF 428

Query: 418 LG 419
            G
Sbjct: 429 PG 430



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 63/119 (52%), Positives = 81/119 (68%), Gaps = 4/119 (3%)

Query: 657  GCMQD----SSELLHNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQM 712
            GC  D     S +L+     +Q    RT+ KV K GSVGRS+D++R+  Y+ELR +L +M
Sbjct: 966  GCSNDVAINDSGVLNGGLWANQTQRMRTYTKVQKRGSVGRSIDVTRYKGYDELRHDLARM 1025

Query: 713  FGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 771
            FGIEG+ EDP  S W+LV+VD END+LL+GDDPWE FVS V  IKILS  +VQ+M   G
Sbjct: 1026 FGIEGQLEDPQSSDWKLVYVDHENDILLVGDDPWEEFVSCVQSIKILSSAEVQQMSLDG 1084


>gi|224118764|ref|XP_002331440.1| predicted protein [Populus trichocarpa]
 gi|222873654|gb|EEF10785.1| predicted protein [Populus trichocarpa]
          Length = 1113

 Score =  518 bits (1333), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 260/365 (71%), Positives = 299/365 (81%), Gaps = 2/365 (0%)

Query: 4   DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQL 63
           + K +N ELW ACAGPLV+LP  GT VVYFPQGHSEQVAA+  K+V++ IPNYPNLP +L
Sbjct: 19  EKKSINPELWQACAGPLVNLPAAGTHVVYFPQGHSEQVAASLKKDVNAQIPNYPNLPSKL 78

Query: 64  ICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQP-TNYFCKTLTAS 122
           +C LHNVT+HAD ETDEVY QMTLQP+S  + KD  +  +L + S +P T +FCKTLTAS
Sbjct: 79  LCLLHNVTLHADPETDEVYVQMTLQPVSSFD-KDALLRSDLALKSNKPQTEFFCKTLTAS 137

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSVPRRAAEK FP LDFS+QPPAQEL+ARDLHD  W FRHI+RGQPKRHLLTT
Sbjct: 138 DTSTHGGFSVPRRAAEKTFPPLDFSMQPPAQELVARDLHDNVWTFRHIYRGQPKRHLLTT 197

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWS+FVS KRL AGDSVLF+ +EK QLLLGIRRA R PT + SSVLSSDSMHIG+LAAAA
Sbjct: 198 GWSLFVSGKRLFAGDSVLFMRDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAA 257

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 302
           HAAA NS FTV++NPRASPSEFVIPL KY KAV+  ++S+GMRFRM+FETEES  RR+MG
Sbjct: 258 HAAANNSPFTVYYNPRASPSEFVIPLAKYYKAVYSNQISLGMRFRMMFETEESGTRRHMG 317

Query: 303 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 362
           TITGISDLD VRW NS WR+++VGWDESTAGER+ RVS+WEIEP+T           R K
Sbjct: 318 TITGISDLDAVRWKNSQWRNLQVGWDESTAGERRNRVSIWEIEPVTAPFFICPPPFFRSK 377

Query: 363 RPWHP 367
            P  P
Sbjct: 378 HPRQP 382



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 73/146 (50%), Positives = 94/146 (64%), Gaps = 12/146 (8%)

Query: 630  VSSFTTSVDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQ----IDQLTPTRTFVKVY 685
            +SS   S   GV  MP       NS+   + DSS  L N G       Q    RT+ KVY
Sbjct: 956  LSSAIVSKSFGVPDMPF------NSIDSTINDSS--LLNRGSWAPPQQQFQRMRTYTKVY 1007

Query: 686  KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDP 745
            K G+VGRS+DI+R+S Y+EL+++L + FGIEG+ ED  R GW+LV+ D ENDVLL+GDDP
Sbjct: 1008 KRGAVGRSIDITRYSGYDELKQDLARRFGIEGQLEDQQRIGWKLVYTDHENDVLLVGDDP 1067

Query: 746  WEAFVSNVWYIKILSPEDVQKMGEQG 771
            WE FV+ V  IKILSP++VQ+M   G
Sbjct: 1068 WEEFVNCVRCIKILSPQEVQQMSLDG 1093


>gi|350540000|ref|NP_001234605.1| auxin response factor 19-1 [Solanum lycopersicum]
 gi|310697416|gb|ADP06663.1| auxin response factor 19-1 [Solanum lycopersicum]
          Length = 1090

 Score =  516 bits (1330), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 274/422 (64%), Positives = 319/422 (75%), Gaps = 14/422 (3%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ K LN ELW ACAGPLV+LP  GT VVYFPQGHSEQVAA+  K+V++ IPNYPNLP +
Sbjct: 11  GEKKNLNPELWQACAGPLVNLPVAGTHVVYFPQGHSEQVAASIKKDVEAQIPNYPNLPAK 70

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPT-NYFCKTLTA 121
           LIC LHNVT+HAD ETDEVYAQMTLQP+ P   K+  +  +L + + +P   +FCKTLTA
Sbjct: 71  LICLLHNVTLHADPETDEVYAQMTLQPV-PSFDKEALLRSDLSMKANKPQPEFFCKTLTA 129

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAEK+FP LD+SLQPPAQEL+ARDLHD  W FRH++RGQPKRHLLT
Sbjct: 130 SDTSTHGGFSVPRRAAEKIFPPLDYSLQPPAQELVARDLHDNIWTFRHVYRGQPKRHLLT 189

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWS+ VS KRL AGDSVLFI +EK+Q LLGIR+A R PT + SSVLSSDSMHIG+LAAA
Sbjct: 190 TGWSLVVSGKRLFAGDSVLFIRDEKHQFLLGIRKANRQPTNLSSSVLSSDSMHIGILAAA 249

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           AHAAA NS FTVF+NPRA PSEFVIPL KY KA + +++S+GMRFRM+FETEES  RRYM
Sbjct: 250 AHAAANNSPFTVFYNPRAGPSEFVIPLAKYYKATYSSQISLGMRFRMMFETEESGTRRYM 309

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSLFPLR 360
           GTITGISDLDPVRW NS WR+++VGWDESTAGER  RVS+WEIEP+T  F +  S F   
Sbjct: 310 GTITGISDLDPVRWKNSQWRNLQVGWDESTAGERINRVSIWEIEPITAPFLICSSPF-FS 368

Query: 361 LKRPWHPST--SSFNDNRDETASGLNWLR---GGTGEQGLTTLNFQSLGMFPWMQQRVEP 415
            KRP  P      ++D        + WL    G    QGL       L +  WM  +  P
Sbjct: 369 SKRPRQPGMPDGDYSDMDGMFKRTMPWLGDDFGMADPQGLP-----GLSLIQWMNMQKNP 423

Query: 416 SF 417
           S 
Sbjct: 424 SL 425



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 61/98 (62%), Positives = 76/98 (77%)

Query: 674  QLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVD 733
            QL   RT+ KVYK G+VGRS+DI+R+S Y EL+ +L + FGIEG+ ED  R GW+LV+VD
Sbjct: 973  QLPRLRTYTKVYKRGAVGRSIDIARYSGYEELKLDLARRFGIEGQLEDRQRIGWKLVYVD 1032

Query: 734  RENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 771
             ENDVLL+GDDPWE FVS V  IKILSP++VQ+M   G
Sbjct: 1033 HENDVLLVGDDPWEEFVSCVRCIKILSPQEVQQMSLDG 1070


>gi|168000388|ref|XP_001752898.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162696061|gb|EDQ82402.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 758

 Score =  516 bits (1328), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 259/360 (71%), Positives = 298/360 (82%), Gaps = 2/360 (0%)

Query: 6   KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 65
           + LNSELWHACAG LVSLP VG+RVVYFPQGH EQVAA+T KE D  IPNYP+LP +L C
Sbjct: 2   RSLNSELWHACAGSLVSLPPVGSRVVYFPQGHIEQVAASTQKEADVPIPNYPSLPSRLFC 61

Query: 66  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTS 125
            L NV++HAD ETDEVYAQMTL P+   E++    P  + IP+KQP+ YFCKTLTASDTS
Sbjct: 62  LLDNVSLHADHETDEVYAQMTLLPIQNSEKEALLAPDSV-IPNKQPSEYFCKTLTASDTS 120

Query: 126 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 185
           THGGFS+PRRAAEKVFP LDF+  PPAQEL+ARDLHD +W FRHI+RGQP+RHLLTTGWS
Sbjct: 121 THGGFSIPRRAAEKVFPPLDFTKSPPAQELVARDLHDQDWHFRHIYRGQPRRHLLTTGWS 180

Query: 186 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 245
           VFVS KRL AGDSVLFI ++K+ LLLGIRRA R  +VMPSSVLSSDSMH G+LAAA+HAA
Sbjct: 181 VFVSIKRLQAGDSVLFIRDDKDHLLLGIRRANRQQSVMPSSVLSSDSMHFGVLAAASHAA 240

Query: 246 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 305
           AT+S F +F+NPR SPSEFVIPL KY KA+++T+V++GMRFRM FETEES+VR+YMGTIT
Sbjct: 241 ATSSRFKIFYNPRQSPSEFVIPLAKYQKALYNTQVTLGMRFRMAFETEESNVRKYMGTIT 300

Query: 306 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL-TTFPMYPSLFPLRLKRP 364
            I DLDP RW  S WRS+KVGWDES AG+RQ RVSLWEIEP  T F + P    LR KRP
Sbjct: 301 CIGDLDPARWPKSDWRSLKVGWDESIAGDRQLRVSLWEIEPTPTPFLLCPPPVALRSKRP 360


>gi|359492211|ref|XP_003634382.1| PREDICTED: auxin response factor 5-like isoform 2 [Vitis vinifera]
          Length = 947

 Score =  514 bits (1325), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 254/365 (69%), Positives = 299/365 (81%), Gaps = 4/365 (1%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G  K +NSELWHACAGPLVSLP VG+ V YFPQGHSEQVA +T +   S IPNYPNLP Q
Sbjct: 36  GPRKAINSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAVSTKRTATSQIPNYPNLPSQ 95

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGI-PSKQPTNYFCKTLTA 121
           L+CQ+HNVT+HAD +TDE+YAQM+LQP++ E  KD F   + G+ PSK P+ +FCKTLTA
Sbjct: 96  LMCQVHNVTLHADKDTDEIYAQMSLQPVNSE--KDIFPIPDFGLKPSKHPSEFFCKTLTA 153

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAEK+FP LD+S+QPP QELI RDLHD+ + FRHI+RGQPKRHLLT
Sbjct: 154 SDTSTHGGFSVPRRAAEKLFPPLDYSMQPPTQELIVRDLHDITYTFRHIYRGQPKRHLLT 213

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWSVFVSAKRL AGD+VLFI +EK+QLLLG+RRA R  T +PSSVLS+DSMHIG+LAAA
Sbjct: 214 TGWSVFVSAKRLRAGDAVLFIRDEKSQLLLGVRRANRQQTSLPSSVLSADSMHIGVLAAA 273

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           AHAAA  S FT+F+NPRA PSEFVIPL KY K+V+ T++SVGMRF M+FETEES  RRYM
Sbjct: 274 AHAAANRSPFTIFYNPRACPSEFVIPLAKYRKSVYGTQISVGMRFGMMFETEESGKRRYM 333

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRL 361
           GTI GISDLDP+ W  S WR+++V WDES  G++Q RVS WEIE   +  ++PSL    L
Sbjct: 334 GTIVGISDLDPLSWPGSKWRNLQVEWDESGCGDKQSRVSSWEIETPESLFIFPSLTS-SL 392

Query: 362 KRPWH 366
           KRP H
Sbjct: 393 KRPMH 397



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 60/114 (52%), Positives = 77/114 (67%), Gaps = 1/114 (0%)

Query: 661 DSSELLHNVG-QIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKF 719
           D S LL N   Q     P RT+ KV K GSVGRS+D++ F +Y EL   +  MFG+EG  
Sbjct: 818 DESSLLQNSSWQQVAPPPMRTYTKVQKMGSVGRSIDVASFKNYEELCSAIECMFGLEGLL 877

Query: 720 EDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVE 773
            D   SGW+LV+VD ENDVLL+GDDPW+ FV  V  I+ILSP +VQ+M E+G++
Sbjct: 878 NDQKGSGWKLVYVDYENDVLLVGDDPWKEFVGCVRCIRILSPSEVQQMSEEGMQ 931


>gi|73697836|gb|AAZ81522.1| auxin response factor 2 [Gossypium arboreum]
          Length = 1099

 Score =  513 bits (1321), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 295/545 (54%), Positives = 371/545 (68%), Gaps = 43/545 (7%)

Query: 4   DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQL 63
           + + +N ELW ACAGPLV+LP  GT VVYFPQGHSEQVAA+  ++VD+ IPNYPNLP +L
Sbjct: 20  ERRHINPELWQACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKRDVDAQIPNYPNLPSKL 79

Query: 64  ICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPT-NYFCKTLTAS 122
           +C LHNVT+HAD ETDEVYAQMTLQP+S  + K+  +  +L + S +P   +FCKTLTAS
Sbjct: 80  LCLLHNVTLHADPETDEVYAQMTLQPVSSFD-KEALLRSDLSLKSNKPQPEFFCKTLTAS 138

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSVPRRAAEK+FP LDFS+Q PAQEL+ARDLH+  WKFRHI+RG+PKRHLLTT
Sbjct: 139 DTSTHGGFSVPRRAAEKIFPPLDFSMQTPAQELVARDLHENVWKFRHIYRGKPKRHLLTT 198

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWS+FVS KRL AGDSVLFI +E  QLLLGIRRA R P  + SSVLSSDSMHIG+LAAAA
Sbjct: 199 GWSLFVSGKRLFAGDSVLFIRDETQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 258

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 302
           HAAA NS FTVF+NPRAS SEFVIPL KY KAV++ ++S GMRFRM+FETEES  RRYMG
Sbjct: 259 HAAANNSPFTVFYNPRASLSEFVIPLAKYYKAVYNHQISPGMRFRMMFETEESGTRRYMG 318

Query: 303 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL-RL 361
           TITGISD+DPVRW NS WR+++VGWDESTAGER+ RVS+WEIEP+T  P +    PL R 
Sbjct: 319 TITGISDIDPVRWKNSQWRNLQVGWDESTAGERRNRVSIWEIEPVTA-PFFICPSPLFRS 377

Query: 362 KRPWHPS--TSSFNDNRDETASGLNW------LRGGTGEQGLTTLNFQSLGMFPWMQQRV 413
           KRP  P      ++D  +     + W      L+      GL+ + + ++   P +   +
Sbjct: 378 KRPRQPGMLADEYSDLDNLFKRPMPWLGDDICLKDSDAHPGLSLVQWMNMQQNPLLANSM 437

Query: 414 EPSFLGNDHNQQYQAMLAAGMQS--GDPVRQQFM----QLQQP--FQYLQQSGSQNPLQL 465
           +P+F+        Q++  + MQ+  G  +  Q      Q+ QP   Q+      Q   QL
Sbjct: 438 QPNFM--------QSLAGSTMQNFDGADLSHQMGLSAPQMPQPNNLQFNAHRLPQKVQQL 489

Query: 466 KQQQHLLQQLNS--------QAEDRAQQQQQ-------PQQHMYHDALQIRTDELLQRQQ 510
            Q   L   +NS        Q  D  QQ +Q       P   +      +R++ +L +QQ
Sbjct: 490 DQVPKLPSTMNSLGSIIQPQQLNDMTQQSRQNLVAQTLPSSQVLQPQALVRSNNILHQQQ 549

Query: 511 SNLPS 515
           ++ P+
Sbjct: 550 TSNPT 554



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 62/110 (56%), Positives = 82/110 (74%)

Query: 679  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 738
            RT+ KVYK G+VGRS+DI+R+S Y+EL+++L + FGIEG+ ED  R GW+LV+VD ENDV
Sbjct: 987  RTYTKVYKRGAVGRSIDITRYSGYDELKQDLARRFGIEGQLEDRGRVGWKLVYVDHENDV 1046

Query: 739  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANSRGN 788
            LL+GDDPWE F++ V  IKILSP++VQ+M   G    S    Q  +S GN
Sbjct: 1047 LLVGDDPWEEFINCVRCIKILSPQEVQQMSMDGEFGNSVLPNQDCSSSGN 1096


>gi|132449787|gb|ABO33637.1| auxin response factor, partial [Solanum lycopersicum]
          Length = 1123

 Score =  513 bits (1321), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 286/474 (60%), Positives = 344/474 (72%), Gaps = 32/474 (6%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ K +NSELWHACAGPLVSLP VG+ VVYFPQGHSEQVAA+  KE D  IP+YPNLP +
Sbjct: 1   GERKLMNSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKETDG-IPSYPNLPSK 59

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP-SKQPTNYFCKTLTA 121
           LIC LHNVT+HAD ETDEVYAQMTLQP++  +Q+   +  E+G+  ++QP  +FCKTLTA
Sbjct: 60  LICMLHNVTLHADTETDEVYAQMTLQPVNKYDQEALLLS-EMGLKQNRQPAEFFCKTLTA 118

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAEK+FP LD+++QPPAQEL+ARDLHD  W FRHI+RGQPKRHLLT
Sbjct: 119 SDTSTHGGFSVPRRAAEKIFPPLDYAMQPPAQELMARDLHDQTWTFRHIYRGQPKRHLLT 178

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWSVF+S+KRL AGDSVLFI +EK+QLLLGI+R  R    + SSV+SSDSMHIG+LAAA
Sbjct: 179 TGWSVFISSKRLCAGDSVLFIRDEKSQLLLGIKRTNRQQPALSSSVISSDSMHIGILAAA 238

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           AHAAA NS FT+F+NPRASPSEFVIPL KY KA++  +VS+GMRFRM+FETEES VRRYM
Sbjct: 239 AHAAANNSPFTIFYNPRASPSEFVIPLAKYNKAMY-AQVSLGMRFRMMFETEESGVRRYM 297

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMY----PSLF 357
           GTITG+SDLDP+RW +S WR+++VGWDESTAGER  RVS+W+IEP+ T P Y    P   
Sbjct: 298 GTITGVSDLDPIRWKSSQWRNLQVGWDESTAGERPSRVSIWDIEPVVT-PFYICPPPFFR 356

Query: 358 PLRLKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQ------- 410
           P   K+P  P   S  D  +    G+ W+    G +      F  L +  WM        
Sbjct: 357 PKFPKQPSFPGDES--DIENVLKRGMPWINDELGLKDAQNSIFPGLSLVQWMSMQQNNHV 414

Query: 411 ---QRVEPSFL-----GNDH----NQQYQAMLAAGMQSGDP--VRQQFMQLQQP 450
              Q   PS L      +DH    N Q  A+   G+Q   P  +   F Q+QQP
Sbjct: 415 PVAQSGLPSVLHSNIGSDDHSKLLNFQSPALATPGLQFNKPNQLTSHFGQIQQP 468



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 65/139 (46%), Positives = 90/139 (64%), Gaps = 13/139 (9%)

Query: 646  LGDSGFHNSMYG---------CMQD----SSELLHNVGQIDQLTPTRTFVKVYKSGSVGR 692
            L D+G ++  +G         C  D     + +L+N    +Q    RT+ KV K GSVGR
Sbjct: 951  LSDAGINSQQFGVPNMSYKPRCANDLAVNDNGILNNNAWTNQTQRMRTYTKVQKRGSVGR 1010

Query: 693  SLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSN 752
            ++D++R+  Y+ELR +L +MFGIEG+ EDP R+ W+LV+VD END+LL+GDDPWE FVS 
Sbjct: 1011 TIDVTRYIGYDELRHDLARMFGIEGQLEDPQRTEWKLVYVDHENDILLVGDDPWEEFVSC 1070

Query: 753  VWYIKILSPEDVQKMGEQG 771
            V  IKILS  +VQ+M   G
Sbjct: 1071 VQSIKILSCAEVQQMSLNG 1089


>gi|449488115|ref|XP_004157943.1| PREDICTED: auxin response factor 19-like [Cucumis sativus]
          Length = 1097

 Score =  511 bits (1317), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 262/352 (74%), Positives = 302/352 (85%), Gaps = 5/352 (1%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ K +NSELWHACAGPLVSLP VG+ VVYFPQGHSEQVAA+ NKE D  IPNYPNLP +
Sbjct: 15  GERKNINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMNKETD-FIPNYPNLPSK 73

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP-SKQPTNYFCKTLTA 121
           LIC LHNVT+HAD ETDEVYAQMTLQP++  E K+  +  ++G+  S+QP  +FCKTLTA
Sbjct: 74  LICMLHNVTLHADPETDEVYAQMTLQPVNKYE-KEALLASDIGLKQSRQPAEFFCKTLTA 132

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAEK+FP LD+S+QPPAQEL+ARDLHD  W FRHI+RGQPKRHLLT
Sbjct: 133 SDTSTHGGFSVPRRAAEKIFPPLDYSMQPPAQELVARDLHDNSWTFRHIYRGQPKRHLLT 192

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWSVFVS KRL AGDSVLFI +EK+QLLLGIRRA R    + SSV+SSDSMHIG+LA+A
Sbjct: 193 TGWSVFVSTKRLFAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVISSDSMHIGILASA 252

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           AHAAA NS FT+F+NPRASPSEFVIPL KY KA++ T+VS+GMRFRM+FETEES VRRYM
Sbjct: 253 AHAAANNSPFTIFYNPRASPSEFVIPLAKYNKAMY-TQVSLGMRFRMMFETEESGVRRYM 311

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMY 353
           GTITGISD+D VRW NS WR+++VGWDES AGER  RVS+WE+EP+ T P Y
Sbjct: 312 GTITGISDMDSVRWKNSQWRNLQVGWDESAAGERPNRVSIWEVEPVVT-PFY 362



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 55/93 (59%), Positives = 72/93 (77%)

Query: 679  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 738
            RT+ KV K GSVGR +D++R+  Y+ELR +L +MFGIEG+ EDP R+ W+LV+VD END+
Sbjct: 970  RTYTKVQKRGSVGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTDWKLVYVDHENDI 1029

Query: 739  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 771
            LL+GDDPW+ FVS V  IKILS  +VQ+M   G
Sbjct: 1030 LLVGDDPWDEFVSCVQSIKILSSAEVQQMSLDG 1062


>gi|359492209|ref|XP_003634381.1| PREDICTED: auxin response factor 5-like isoform 1 [Vitis vinifera]
          Length = 925

 Score =  511 bits (1317), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 252/363 (69%), Positives = 299/363 (82%), Gaps = 4/363 (1%)

Query: 5   NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLI 64
           ++ +NSELWHACAGPLVSLP VG+ V YFPQGHSEQVA +T +   S IPNYPNLP QL+
Sbjct: 16  SEAINSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAVSTKRTATSQIPNYPNLPSQLM 75

Query: 65  CQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGI-PSKQPTNYFCKTLTASD 123
           CQ+HNVT+HAD +TDE+YAQM+LQP++ E  KD F   + G+ PSK P+ +FCKTLTASD
Sbjct: 76  CQVHNVTLHADKDTDEIYAQMSLQPVNSE--KDIFPIPDFGLKPSKHPSEFFCKTLTASD 133

Query: 124 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 183
           TSTHGGFSVPRRAAEK+FP LD+S+QPP QELI RDLHD+ + FRHI+RGQPKRHLLTTG
Sbjct: 134 TSTHGGFSVPRRAAEKLFPPLDYSMQPPTQELIVRDLHDITYTFRHIYRGQPKRHLLTTG 193

Query: 184 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAH 243
           WSVFVSAKRL AGD+VLFI +EK+QLLLG+RRA R  T +PSSVLS+DSMHIG+LAAAAH
Sbjct: 194 WSVFVSAKRLRAGDAVLFIRDEKSQLLLGVRRANRQQTSLPSSVLSADSMHIGVLAAAAH 253

Query: 244 AAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGT 303
           AAA  S FT+F+NPRA PSEFVIPL KY K+V+ T++SVGMRF M+FETEES  RRYMGT
Sbjct: 254 AAANRSPFTIFYNPRACPSEFVIPLAKYRKSVYGTQISVGMRFGMMFETEESGKRRYMGT 313

Query: 304 ITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKR 363
           I GISDLDP+ W  S WR+++V WDES  G++Q RVS WEIE   +  ++PSL    LKR
Sbjct: 314 IVGISDLDPLSWPGSKWRNLQVEWDESGCGDKQSRVSSWEIETPESLFIFPSLTS-SLKR 372

Query: 364 PWH 366
           P H
Sbjct: 373 PMH 375



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 60/114 (52%), Positives = 77/114 (67%), Gaps = 1/114 (0%)

Query: 661 DSSELLHNVG-QIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKF 719
           D S LL N   Q     P RT+ KV K GSVGRS+D++ F +Y EL   +  MFG+EG  
Sbjct: 796 DESSLLQNSSWQQVAPPPMRTYTKVQKMGSVGRSIDVASFKNYEELCSAIECMFGLEGLL 855

Query: 720 EDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVE 773
            D   SGW+LV+VD ENDVLL+GDDPW+ FV  V  I+ILSP +VQ+M E+G++
Sbjct: 856 NDQKGSGWKLVYVDYENDVLLVGDDPWKEFVGCVRCIRILSPSEVQQMSEEGMQ 909


>gi|356530459|ref|XP_003533798.1| PREDICTED: uncharacterized protein LOC100804628 [Glycine max]
          Length = 1125

 Score =  511 bits (1317), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 271/412 (65%), Positives = 322/412 (78%), Gaps = 11/412 (2%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ K +NSELWHACAGPLVSLP VG+ VVYFPQGHSEQVAA+  KE D  IP+YPNLP +
Sbjct: 15  GERKTINSELWHACAGPLVSLPPVGSVVVYFPQGHSEQVAASMQKEAD-FIPSYPNLPSK 73

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP-SKQPTNYFCKTLTA 121
           LIC LHNV +HAD ETDEVYAQMTLQP++ +  K+  +  ++G+  ++QPT +FCKTLTA
Sbjct: 74  LICMLHNVALHADPETDEVYAQMTLQPVN-KYDKEALLASDMGLKQNQQPTEFFCKTLTA 132

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAEK+FP LDFS+QPPAQE++A+DLHD  W FRHI+RGQPKRHLLT
Sbjct: 133 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDNTWTFRHIYRGQPKRHLLT 192

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWSVFVS KRL AGDSVLFI +EK QLLLGI+RA R    + SSV+SSDSMHIG+LAAA
Sbjct: 193 TGWSVFVSTKRLFAGDSVLFIRDEKQQLLLGIKRANRQQPALSSSVISSDSMHIGILAAA 252

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           AHAA+ NS FT+F+NPRASPSEFVIPL KY KA+F+ +VS+GMRFRM+FETEES VRRYM
Sbjct: 253 AHAASNNSPFTIFYNPRASPSEFVIPLAKYNKALFN-QVSLGMRFRMMFETEESGVRRYM 311

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMY----PSLF 357
           GTITGI+DLDPVRW NS WR+++VGWDESTAGER  RVS+W+IEP+ T P Y    P   
Sbjct: 312 GTITGITDLDPVRWKNSQWRNLQVGWDESTAGERPSRVSIWDIEPVVT-PFYICPPPFFR 370

Query: 358 PLRLKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWM 409
           P   K+P  P   S  D  +     + WL    G +  ++  F    +  WM
Sbjct: 371 PKFPKQPGMPDDES--DIENAFKRAMPWLGDDLGMKDASSSVFPGFSLMQWM 420



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 73/166 (43%), Positives = 96/166 (57%), Gaps = 13/166 (7%)

Query: 628  TTVSSFTTSVDP-GVSSMPLGDSGFHNSMYGCMQDSS----ELLHNVGQIDQLTPTRTFV 682
            T +S+   S  P GV  MP           GC  D +     +L+N    +Q    RT+ 
Sbjct: 950  TELSTAALSPQPFGVPDMPFKP--------GCSSDIAINDPGVLNNGLWANQTQRMRTYT 1001

Query: 683  KVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLG 742
            KV K GSVGR +D++R+  Y+ELR +L +MFGIEG+ EDP R+ W+LV+VD END+LL+G
Sbjct: 1002 KVQKCGSVGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTEWKLVYVDHENDILLVG 1061

Query: 743  DDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANSRGN 788
            DDPWE FVS V  IKILS  +VQ+M   G     P   Q  +   N
Sbjct: 1062 DDPWEEFVSCVQSIKILSSSEVQQMSLDGDLGHVPVPNQACSGTDN 1107


>gi|47496692|dbj|BAD19061.1| auxin response factor 1 [Cucumis sativus]
          Length = 1081

 Score =  511 bits (1317), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 262/352 (74%), Positives = 302/352 (85%), Gaps = 5/352 (1%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ K +NSELWHACAGPLVSLP VG+ VVYFPQGHSEQVAA+ NKE D  IPNYPNLP +
Sbjct: 15  GERKNINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMNKETD-FIPNYPNLPSK 73

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP-SKQPTNYFCKTLTA 121
           LIC LHNVT+HAD ETDEVYAQMTLQP++  E K+  +  ++G+  S+QP  +FCKTLTA
Sbjct: 74  LICMLHNVTLHADPETDEVYAQMTLQPVNKYE-KEALLASDIGLKQSRQPAEFFCKTLTA 132

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAEK+FP LD+S+QPPAQEL+ARDLHD  W FRHI+RGQPKRHLLT
Sbjct: 133 SDTSTHGGFSVPRRAAEKIFPPLDYSMQPPAQELVARDLHDNSWTFRHIYRGQPKRHLLT 192

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWSVFVS KRL AGDSVLFI +EK+QLLLGIRRA R    + SSV+SSDSMHIG+LA+A
Sbjct: 193 TGWSVFVSTKRLFAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVISSDSMHIGILASA 252

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           AHAAA NS FT+F+NPRASPSEFVIPL KY KA++ T+VS+GMRFRM+FETEES VRRYM
Sbjct: 253 AHAAANNSPFTIFYNPRASPSEFVIPLAKYNKAMY-TQVSLGMRFRMMFETEESGVRRYM 311

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMY 353
           GTITGISD+D VRW NS WR+++VGWDES AGER  RVS+WE+EP+ T P Y
Sbjct: 312 GTITGISDMDSVRWKNSQWRNLQVGWDESAAGERPNRVSIWEVEPVVT-PFY 362



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 54/89 (60%), Positives = 71/89 (79%)

Query: 679  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 738
            RT+ KV K GSVGR +D++R+  Y+ELR +L +MFGIEG+ EDP R+ W+LV+VD END+
Sbjct: 970  RTYTKVQKRGSVGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTDWKLVYVDHENDI 1029

Query: 739  LLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
            LL+GDDPW+ FVS V  IKILS  +VQ+M
Sbjct: 1030 LLVGDDPWDEFVSCVQSIKILSSAEVQQM 1058


>gi|222636179|gb|EEE66311.1| hypothetical protein OsJ_22545 [Oryza sativa Japonica Group]
          Length = 1138

 Score =  510 bits (1314), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 256/359 (71%), Positives = 294/359 (81%), Gaps = 2/359 (0%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
            +NSELWHACAGPLVSLP  G+ VVYFPQGHSEQVAA+  K+VD+H+P+YPNLP +LIC 
Sbjct: 23  AINSELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDAHVPSYPNLPSKLICL 82

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQP-TNYFCKTLTASDTS 125
           LHNVT+HAD ETDEVYAQMTLQP++    K+     EL +   +P T +FCKTLTASDTS
Sbjct: 83  LHNVTLHADPETDEVYAQMTLQPVT-SYGKEALQLSELALKQARPQTEFFCKTLTASDTS 141

Query: 126 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 185
           THGGFSVPRRAAEK+FP LDFS+QPPAQEL ARDLHD  W FRHI+RGQPKRHLLTTGWS
Sbjct: 142 THGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWS 201

Query: 186 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 245
           +FVS KRL AGDSV+F+ +EK QLLLGIRRA R PT + SSVLSSDSMHIG+LAAAAHAA
Sbjct: 202 LFVSGKRLFAGDSVIFVRDEKQQLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHAA 261

Query: 246 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 305
           A NS FT+F+NPRASP+EFVIP  KY KAV+  ++S+GMRFRM+FETEE   RRYMGTIT
Sbjct: 262 ANNSPFTIFYNPRASPTEFVIPFAKYQKAVYGNQISLGMRFRMMFETEELGTRRYMGTIT 321

Query: 306 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRP 364
           GISDLDPVRW NS WR+++VGWDES AGER+ RVS+WEIEP+              KRP
Sbjct: 322 GISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAAPFFICPPPFFGAKRP 380



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 59/116 (50%), Positives = 82/116 (70%), Gaps = 3/116 (2%)

Query: 679  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 738
            RTF KVYK G+VGRS+D+S+FS Y+EL+  L +MF IEG+ E+  R GW+LV+ D E+D+
Sbjct: 1004 RTFTKVYKRGAVGRSIDMSQFSGYDELKHALARMFSIEGQLEERQRIGWKLVYKDHEDDI 1063

Query: 739  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVE---SFSPSSGQRANSRGNCGR 791
            LLLGDDPWE FV  V  I+ILSP++VQ+M  +G +   +  P+    ++  GN  R
Sbjct: 1064 LLLGDDPWEEFVGCVKCIRILSPQEVQQMSLEGCDLGNNIPPNQACSSSDGGNAWR 1119


>gi|218198843|gb|EEC81270.1| hypothetical protein OsI_24368 [Oryza sativa Indica Group]
          Length = 1137

 Score =  510 bits (1314), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 256/359 (71%), Positives = 294/359 (81%), Gaps = 2/359 (0%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
            +NSELWHACAGPLVSLP  G+ VVYFPQGHSEQVAA+  K+VD+H+P+YPNLP +LIC 
Sbjct: 23  AINSELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDAHVPSYPNLPSKLICL 82

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQP-TNYFCKTLTASDTS 125
           LHNVT+HAD ETDEVYAQMTLQP++    K+     EL +   +P T +FCKTLTASDTS
Sbjct: 83  LHNVTLHADPETDEVYAQMTLQPVT-SYGKEALQLSELALKQARPQTEFFCKTLTASDTS 141

Query: 126 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 185
           THGGFSVPRRAAEK+FP LDFS+QPPAQEL ARDLHD  W FRHI+RGQPKRHLLTTGWS
Sbjct: 142 THGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWS 201

Query: 186 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 245
           +FVS KRL AGDSV+F+ +EK QLLLGIRRA R PT + SSVLSSDSMHIG+LAAAAHAA
Sbjct: 202 LFVSGKRLFAGDSVIFVRDEKQQLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHAA 261

Query: 246 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 305
           A NS FT+F+NPRASP+EFVIP  KY KAV+  ++S+GMRFRM+FETEE   RRYMGTIT
Sbjct: 262 ANNSPFTIFYNPRASPTEFVIPFAKYQKAVYGNQISLGMRFRMMFETEELGTRRYMGTIT 321

Query: 306 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRP 364
           GISDLDPVRW NS WR+++VGWDES AGER+ RVS+WEIEP+              KRP
Sbjct: 322 GISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAAPFFICPPPFFGAKRP 380



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 59/116 (50%), Positives = 82/116 (70%), Gaps = 3/116 (2%)

Query: 679  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 738
            RTF KVYK G+VGRS+D+S+FS Y+EL+  L +MF IEG+ E+  R GW+LV+ D E+D+
Sbjct: 1003 RTFTKVYKRGAVGRSIDMSQFSGYDELKHALARMFSIEGQLEERQRIGWKLVYKDHEDDI 1062

Query: 739  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVE---SFSPSSGQRANSRGNCGR 791
            LLLGDDPWE FV  V  I+ILSP++VQ+M  +G +   +  P+    ++  GN  R
Sbjct: 1063 LLLGDDPWEEFVGCVKCIRILSPQEVQQMSLEGCDLGNNIPPNQACSSSDGGNAWR 1118


>gi|158564106|sp|Q0D9R7.2|ARFS_ORYSJ RecName: Full=Auxin response factor 19; AltName: Full=OsARF7a
          Length = 1161

 Score =  510 bits (1314), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 256/359 (71%), Positives = 294/359 (81%), Gaps = 2/359 (0%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
            +NSELWHACAGPLVSLP  G+ VVYFPQGHSEQVAA+  K+VD+H+P+YPNLP +LIC 
Sbjct: 46  AINSELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDAHVPSYPNLPSKLICL 105

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQP-TNYFCKTLTASDTS 125
           LHNVT+HAD ETDEVYAQMTLQP++    K+     EL +   +P T +FCKTLTASDTS
Sbjct: 106 LHNVTLHADPETDEVYAQMTLQPVT-SYGKEALQLSELALKQARPQTEFFCKTLTASDTS 164

Query: 126 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 185
           THGGFSVPRRAAEK+FP LDFS+QPPAQEL ARDLHD  W FRHI+RGQPKRHLLTTGWS
Sbjct: 165 THGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWS 224

Query: 186 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 245
           +FVS KRL AGDSV+F+ +EK QLLLGIRRA R PT + SSVLSSDSMHIG+LAAAAHAA
Sbjct: 225 LFVSGKRLFAGDSVIFVRDEKQQLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHAA 284

Query: 246 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 305
           A NS FT+F+NPRASP+EFVIP  KY KAV+  ++S+GMRFRM+FETEE   RRYMGTIT
Sbjct: 285 ANNSPFTIFYNPRASPTEFVIPFAKYQKAVYGNQISLGMRFRMMFETEELGTRRYMGTIT 344

Query: 306 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRP 364
           GISDLDPVRW NS WR+++VGWDES AGER+ RVS+WEIEP+              KRP
Sbjct: 345 GISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAAPFFICPPPFFGAKRP 403



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 59/116 (50%), Positives = 82/116 (70%), Gaps = 3/116 (2%)

Query: 679  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 738
            RTF KVYK G+VGRS+D+S+FS Y+EL+  L +MF IEG+ E+  R GW+LV+ D E+D+
Sbjct: 1027 RTFTKVYKRGAVGRSIDMSQFSGYDELKHALARMFSIEGQLEERQRIGWKLVYKDHEDDI 1086

Query: 739  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVE---SFSPSSGQRANSRGNCGR 791
            LLLGDDPWE FV  V  I+ILSP++VQ+M  +G +   +  P+    ++  GN  R
Sbjct: 1087 LLLGDDPWEEFVGCVKCIRILSPQEVQQMSLEGCDLGNNIPPNQACSSSDGGNAWR 1142


>gi|357123645|ref|XP_003563519.1| PREDICTED: auxin response factor 19-like [Brachypodium distachyon]
          Length = 1149

 Score =  510 bits (1313), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 252/348 (72%), Positives = 294/348 (84%), Gaps = 4/348 (1%)

Query: 3   GDNKC--LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLP 60
           G+ K   +NSELWHACAGPLVSLP  G+ VVYFPQGHSEQVAA+  K+VD+H+PNYPNLP
Sbjct: 35  GEKKAPVINSELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDAHVPNYPNLP 94

Query: 61  PQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTN-YFCKTL 119
            +LIC LHN+T+HAD+ETDEVYAQMTLQP++    K+     EL +   +P N +FCKTL
Sbjct: 95  SKLICLLHNITLHADLETDEVYAQMTLQPVT-SYGKEALQLSELALKQSRPQNEFFCKTL 153

Query: 120 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 179
           TASDTSTHGGFSVPRRAAEK+FP LDFS+QPPAQE+ ARDLHD  W FRHI+RGQPKRHL
Sbjct: 154 TASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIQARDLHDNVWTFRHIYRGQPKRHL 213

Query: 180 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLA 239
           LTTGWS+FVS KRL AGDSV+F+ +E+ QLLLGIRRA R PT + SSVLSSDSMHIG+LA
Sbjct: 214 LTTGWSLFVSGKRLFAGDSVIFVRDERQQLLLGIRRANRQPTNISSSVLSSDSMHIGILA 273

Query: 240 AAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRR 299
           AAAHA A NS FT+F+NPRASP+EFVIP  KY KAV+  ++S+GMRFRM+FETEE   RR
Sbjct: 274 AAAHADANNSPFTIFYNPRASPTEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEELGTRR 333

Query: 300 YMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 347
           YMGTITGISDLDPVRW NS WR+++VGWDES AGER+ RVS+WEIEP+
Sbjct: 334 YMGTITGISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPV 381



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 55/93 (59%), Positives = 74/93 (79%)

Query: 679  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 738
            RTF KVYK G+VGRS+DIS+++ Y+EL+  L +MF IEG+ E+  R GW+LV+ D E+D+
Sbjct: 1015 RTFTKVYKRGAVGRSIDISQYAGYDELKHALARMFSIEGQLEERQRIGWKLVYRDHEDDI 1074

Query: 739  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 771
            LLLGDDPWE FV+ V YI+ILSP++VQ+M   G
Sbjct: 1075 LLLGDDPWEEFVNCVKYIRILSPQEVQQMSLDG 1107


>gi|19352045|dbj|BAB85916.1| auxin response factor 7a [Oryza sativa]
          Length = 1123

 Score =  510 bits (1313), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 256/359 (71%), Positives = 294/359 (81%), Gaps = 2/359 (0%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
            +NSELWHACAGPLVSLP  G+ VVYFPQGHSEQVAA+  K+VD+H+P+YPNLP +LIC 
Sbjct: 8   AINSELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDAHVPSYPNLPSKLICL 67

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQP-TNYFCKTLTASDTS 125
           LHNVT+HAD ETDEVYAQMTLQP++    K+     EL +   +P T +FCKTLTASDTS
Sbjct: 68  LHNVTLHADPETDEVYAQMTLQPVT-SYGKEALQLSELALKQARPQTEFFCKTLTASDTS 126

Query: 126 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 185
           THGGFSVPRRAAEK+FP LDFS+QPPAQEL ARDLHD  W FRHI+RGQPKRHLLTTGWS
Sbjct: 127 THGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWS 186

Query: 186 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 245
           +FVS KRL AGDSV+F+ +EK QLLLGIRRA R PT + SSVLSSDSMHIG+LAAAAHAA
Sbjct: 187 LFVSGKRLFAGDSVIFVRDEKQQLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHAA 246

Query: 246 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 305
           A NS FT+F+NPRASP+EFVIP  KY KAV+  ++S+GMRFRM+FETEE   RRYMGTIT
Sbjct: 247 ANNSPFTIFYNPRASPTEFVIPFAKYQKAVYGNQISLGMRFRMMFETEELGTRRYMGTIT 306

Query: 306 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRP 364
           GISDLDPVRW NS WR+++VGWDES AGER+ RVS+WEIEP+              KRP
Sbjct: 307 GISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAAPFFICPPPFFGAKRP 365



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 59/116 (50%), Positives = 82/116 (70%), Gaps = 3/116 (2%)

Query: 679  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 738
            RTF KVYK G+VGRS+D+S+FS Y+EL+  L +MF IEG+ E+  R GW+LV+ D E+D+
Sbjct: 989  RTFTKVYKRGAVGRSIDMSQFSGYDELKHALARMFSIEGQLEERQRIGWKLVYKDHEDDI 1048

Query: 739  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVE---SFSPSSGQRANSRGNCGR 791
            LLLGDDPWE FV  V  I+ILSP++VQ+M  +G +   +  P+    ++  GN  R
Sbjct: 1049 LLLGDDPWEEFVGCVKCIRILSPQEVQQMSLEGCDLGNNIPPNQACSSSDGGNAWR 1104


>gi|356547962|ref|XP_003542373.1| PREDICTED: uncharacterized protein LOC100805456 [Glycine max]
          Length = 1131

 Score =  509 bits (1311), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 259/352 (73%), Positives = 300/352 (85%), Gaps = 5/352 (1%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ K +NSELWHACAGPLVSLP VG+ VVYFPQGHSEQVAA+  KE D  IP+YPNLP +
Sbjct: 15  GERKTINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKEAD-FIPSYPNLPSK 73

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP-SKQPTNYFCKTLTA 121
           LIC LHNV +HAD ETDEVYAQMTLQP++  E K+  +  ++G+  ++QPT +FCKTLTA
Sbjct: 74  LICMLHNVALHADPETDEVYAQMTLQPVNKYE-KEAILASDMGLKQNRQPTEFFCKTLTA 132

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAEK+FP LD+S+QPPAQEL+A+DLHD  W FRHI+RGQPKRHLLT
Sbjct: 133 SDTSTHGGFSVPRRAAEKIFPPLDYSMQPPAQELVAKDLHDNTWAFRHIYRGQPKRHLLT 192

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWSVFVS KRL AGDSVLFI +EK  LLLGIRRA R    + SSV+SSDSMHIG+LAAA
Sbjct: 193 TGWSVFVSTKRLFAGDSVLFIRDEKQHLLLGIRRANRQQPALSSSVISSDSMHIGILAAA 252

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           AHAAA NS FT+F+NPRASPSEFV+PL KY K V +T+VS+GMRFRM+FETEES VRRYM
Sbjct: 253 AHAAANNSPFTIFYNPRASPSEFVVPLAKYNK-VTYTQVSLGMRFRMMFETEESGVRRYM 311

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMY 353
           GTITGI+DLDPVRW +S WR+++VGWDESTAGER  RVS+WEIEP+ T P Y
Sbjct: 312 GTITGINDLDPVRWKSSQWRNIQVGWDESTAGERPSRVSIWEIEPVVT-PFY 362



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 73/161 (45%), Positives = 96/161 (59%), Gaps = 17/161 (10%)

Query: 640  GVSSMPLGDSGFHNSMYGC-----MQDSSELLHNVGQIDQLTP-TRTFVKVYKSGSVGRS 693
            GV +MP           GC     + D+  L +N G     TP  RT+ KV K GSVGR 
Sbjct: 966  GVPNMPFKP--------GCSSDVGINDTGVLNNNNGLRANQTPRMRTYTKVQKRGSVGRC 1017

Query: 694  LDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNV 753
            +D++R+  Y+ELR +L +MFGIEG+ EDPLR+ W+LV+VD END+LL+GDDPW+ FVS V
Sbjct: 1018 IDVTRYKGYDELRHDLARMFGIEGQLEDPLRTDWKLVYVDHENDILLVGDDPWDEFVSCV 1077

Query: 754  WYIKILSPEDVQKM---GEQGVESFSPSSGQRANSRGNCGR 791
              IKILS  +VQ+M   G+ G     P+        GN  R
Sbjct: 1078 QSIKILSSAEVQQMSLDGDLGGNVPIPNQAYSGTDSGNAWR 1118


>gi|297606458|ref|NP_001058492.2| Os06g0702600 [Oryza sativa Japonica Group]
 gi|53791908|dbj|BAD54030.1| putative auxin response factor 7a [Oryza sativa Japonica Group]
 gi|53792756|dbj|BAD53792.1| putative auxin response factor 7a [Oryza sativa Japonica Group]
 gi|255677372|dbj|BAF20406.2| Os06g0702600 [Oryza sativa Japonica Group]
          Length = 991

 Score =  509 bits (1310), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 256/359 (71%), Positives = 294/359 (81%), Gaps = 2/359 (0%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
            +NSELWHACAGPLVSLP  G+ VVYFPQGHSEQVAA+  K+VD+H+P+YPNLP +LIC 
Sbjct: 46  AINSELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDAHVPSYPNLPSKLICL 105

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQP-TNYFCKTLTASDTS 125
           LHNVT+HAD ETDEVYAQMTLQP++    K+     EL +   +P T +FCKTLTASDTS
Sbjct: 106 LHNVTLHADPETDEVYAQMTLQPVT-SYGKEALQLSELALKQARPQTEFFCKTLTASDTS 164

Query: 126 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 185
           THGGFSVPRRAAEK+FP LDFS+QPPAQEL ARDLHD  W FRHI+RGQPKRHLLTTGWS
Sbjct: 165 THGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWS 224

Query: 186 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 245
           +FVS KRL AGDSV+F+ +EK QLLLGIRRA R PT + SSVLSSDSMHIG+LAAAAHAA
Sbjct: 225 LFVSGKRLFAGDSVIFVRDEKQQLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHAA 284

Query: 246 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 305
           A NS FT+F+NPRASP+EFVIP  KY KAV+  ++S+GMRFRM+FETEE   RRYMGTIT
Sbjct: 285 ANNSPFTIFYNPRASPTEFVIPFAKYQKAVYGNQISLGMRFRMMFETEELGTRRYMGTIT 344

Query: 306 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRP 364
           GISDLDPVRW NS WR+++VGWDES AGER+ RVS+WEIEP+              KRP
Sbjct: 345 GISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAAPFFICPPPFFGAKRP 403



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 60/120 (50%), Positives = 83/120 (69%), Gaps = 3/120 (2%)

Query: 675 LTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDR 734
           L   RTF KVYK G+VGRS+D+S+FS Y+EL+  L +MF IEG+ E+  R GW+LV+ D 
Sbjct: 853 LKRMRTFTKVYKRGAVGRSIDMSQFSGYDELKHALARMFSIEGQLEERQRIGWKLVYKDH 912

Query: 735 ENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVE---SFSPSSGQRANSRGNCGR 791
           E+D+LLLGDDPWE FV  V  I+ILSP++VQ+M  +G +   +  P+    ++  GN  R
Sbjct: 913 EDDILLLGDDPWEEFVGCVKCIRILSPQEVQQMSLEGCDLGNNIPPNQACSSSDGGNAWR 972


>gi|350539842|ref|NP_001234545.1| auxin response factor 5 [Solanum lycopersicum]
 gi|300253180|gb|ADJ96592.1| auxin response factor 5 [Solanum lycopersicum]
 gi|310697420|gb|ADP06665.1| auxin response factor 5 [Solanum lycopersicum]
          Length = 930

 Score =  509 bits (1310), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 249/365 (68%), Positives = 298/365 (81%), Gaps = 4/365 (1%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G  K ++SELWHACAGPLV+LP VG+ V YFPQGHSEQVA +TN+   S IPNYPNL  Q
Sbjct: 36  GGRKLISSELWHACAGPLVTLPQVGSLVYYFPQGHSEQVAVSTNRTATSQIPNYPNLASQ 95

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGI-PSKQPTNYFCKTLTA 121
           L+CQ+HNVT+HAD ETDE+YAQM+LQP++ E  KD F   + G+ P+K PT +FCKTLTA
Sbjct: 96  LLCQVHNVTLHADKETDEIYAQMSLQPVNSE--KDVFPIPDFGLKPNKHPTEFFCKTLTA 153

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAEK+FP LD+S+QPP QEL+ RDLHD  W FRHI+RGQPKRHLLT
Sbjct: 154 SDTSTHGGFSVPRRAAEKLFPPLDYSMQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLT 213

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWS+FV AKRL AGDSVLFI +EK+QLLLG+RRA R  T +PSSVLS+DSMHIG+LAAA
Sbjct: 214 TGWSMFVGAKRLRAGDSVLFIRDEKSQLLLGVRRANRQQTSLPSSVLSADSMHIGVLAAA 273

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           AHAAA  S FT+F+NPRA PSEFVIPL K+ K+V++T++SVGMRF M+FETEES  RRYM
Sbjct: 274 AHAAANRSTFTIFYNPRACPSEFVIPLAKFRKSVYNTQLSVGMRFGMMFETEESGKRRYM 333

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRL 361
           GTI+GISDLDP+RW  S WR ++V WDE   G++Q RVS WE+E   +  ++PSL    L
Sbjct: 334 GTISGISDLDPLRWPGSKWRCLQVEWDEPGCGDKQNRVSPWEVETPESLFIFPSL-TAGL 392

Query: 362 KRPWH 366
           KRP+ 
Sbjct: 393 KRPYQ 397



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/195 (41%), Positives = 110/195 (56%), Gaps = 5/195 (2%)

Query: 594 NGKDAAVGTENCN---TDSQNSVVFGVHIDSSGLLLPTTVSSFTTSVDPGVSSMPLGDSG 650
           N   + V  E CN   TD QN   F +   SS   + + ++S + +     S     D+ 
Sbjct: 729 NSVSSTVLDEFCNLKHTDFQNPSDFLLGNISSSQDVQSQITSASLADSQNFSVQEFADNS 788

Query: 651 FHNSMYGCMQDSSELLHNVGQIDQLTP-TRTFVKVYKSGSVGRSLDISRFSSYNELREEL 709
              S      D   LL N     Q+ P  RT+ K+ K+GSVGRS+D+S F +Y ELR E+
Sbjct: 789 GGASSSNVNFDECNLLQN-SSWQQVAPRVRTYTKIQKTGSVGRSIDVSGFKNYEELRSEI 847

Query: 710 GQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGE 769
            +MFG+EG   D   S W+LV+VD ENDVLL+GDDPWE FV  V  I+ILSP +VQ+MGE
Sbjct: 848 ERMFGLEGLLNDTRGSSWKLVYVDFENDVLLVGDDPWEEFVGCVRCIRILSPTEVQQMGE 907

Query: 770 QGVESFSPSSGQRAN 784
           +G++  + +  Q  N
Sbjct: 908 EGMQLLNSAGLQSIN 922


>gi|15221978|ref|NP_173356.1| auxin response factor 19 [Arabidopsis thaliana]
 gi|46576613|sp|Q8RYC8.2|ARFS_ARATH RecName: Full=Auxin response factor 19; AltName:
           Full=Auxin-responsive protein IAA22
 gi|37540154|gb|AAG35176.1| ARF11/IAA22 [Arabidopsis thaliana]
 gi|49616363|gb|AAT67078.1| ARF19 [Arabidopsis thaliana]
 gi|56961712|gb|AAB91321.2| early auxin-induced IAA22 [Arabidopsis thaliana]
 gi|225897946|dbj|BAH30305.1| hypothetical protein [Arabidopsis thaliana]
 gi|332191698|gb|AEE29819.1| auxin response factor 19 [Arabidopsis thaliana]
          Length = 1086

 Score =  508 bits (1309), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 261/412 (63%), Positives = 320/412 (77%), Gaps = 11/412 (2%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ K +NS+LWHACAGPLVSLP VG+ VVYFPQGHSEQVAA+  K+ D  IPNYPNLP +
Sbjct: 15  GEKKPINSQLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKQTD-FIPNYPNLPSK 73

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP-SKQPTNYFCKTLTA 121
           LIC LH+VT+HAD ETDEVYAQMTLQP++ +  ++  +  ++G+  ++QPT +FCKTLTA
Sbjct: 74  LICLLHSVTLHADTETDEVYAQMTLQPVN-KYDREALLASDMGLKLNRQPTEFFCKTLTA 132

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAEK+FP LDFS+QPPAQE++A+DLHD  W FRHI+RGQPKRHLLT
Sbjct: 133 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRGQPKRHLLT 192

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWSVFVS KRL AGDSVLF+ +EK+QL+LGIRRA R    + SSV+SSDSMHIG+LAAA
Sbjct: 193 TGWSVFVSTKRLFAGDSVLFVRDEKSQLMLGIRRANRQTPTLSSSVISSDSMHIGILAAA 252

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           AHA A +S FT+FFNPRASPSEFV+PL KY KA++  +VS+GMRFRM+FETE+  VRRYM
Sbjct: 253 AHANANSSPFTIFFNPRASPSEFVVPLAKYNKALY-AQVSLGMRFRMMFETEDCGVRRYM 311

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRL 361
           GT+TGISDLDPVRW  S WR+++VGWDESTAG+R  RVS+WEIEP+ T P Y  + P   
Sbjct: 312 GTVTGISDLDPVRWKGSQWRNLQVGWDESTAGDRPSRVSIWEIEPVIT-PFY--ICPPPF 368

Query: 362 KRPWHPSTSSFNDNRDETASGLN----WLRGGTGEQGLTTLNFQSLGMFPWM 409
            RP +P      D+  +  +       W+    G +   +  F  L +  WM
Sbjct: 369 FRPKYPRQPGMPDDELDMENAFKRAMPWMGEDFGMKDAQSSMFPGLSLVQWM 420



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 70/144 (48%), Positives = 96/144 (66%), Gaps = 6/144 (4%)

Query: 640  GVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQI--DQLTPTRTFVKVYKSGSVGRSLDIS 697
            G+ S+P    G  N + G + DS   + N G +  +Q    RT+ KV K GSVGRS+D++
Sbjct: 921  GIPSIPF-KPGCSNEV-GGINDSG--IMNGGGLWPNQTQRMRTYTKVQKRGSVGRSIDVT 976

Query: 698  RFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIK 757
            R+S Y+ELR +L +MFGIEG+ EDPL S W+LV+ D END+LL+GDDPWE FV+ V  IK
Sbjct: 977  RYSGYDELRHDLARMFGIEGQLEDPLTSDWKLVYTDHENDILLVGDDPWEEFVNCVQNIK 1036

Query: 758  ILSPEDVQKMGEQGVESFSPSSGQ 781
            ILS  +VQ+M   G  +  P++ Q
Sbjct: 1037 ILSSVEVQQMSLDGDLAAIPTTNQ 1060


>gi|449522288|ref|XP_004168159.1| PREDICTED: uncharacterized LOC101205542 [Cucumis sativus]
          Length = 1107

 Score =  508 bits (1308), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 261/366 (71%), Positives = 299/366 (81%), Gaps = 4/366 (1%)

Query: 4   DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQL 63
           + K +N ELW ACAGPLV+LP  G  VVYFPQGHSEQVAA+  K+VD  +PNYP+L  +L
Sbjct: 23  EKKIINPELWQACAGPLVNLPPAGYHVVYFPQGHSEQVAASLRKDVDGQVPNYPSLASKL 82

Query: 64  ICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPT-NYFCKTLTAS 122
           +C LHNVT+HAD ETDEVYAQMTL P+ P   KD  +  +L + S +P   +FCKTLTAS
Sbjct: 83  LCLLHNVTLHADPETDEVYAQMTLLPV-PSFDKDALLRSDLALKSNKPQPEFFCKTLTAS 141

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSVPRRAAEK+FP LDFS+QPPAQEL+A+DLHD  W FRHI+RGQPKRHLLTT
Sbjct: 142 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVAKDLHDNVWTFRHIYRGQPKRHLLTT 201

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWS+FVS KRL+AGDSVLFI +EK QLLLGIRRA R PT + SSVLSSDSMHIG+LAAAA
Sbjct: 202 GWSLFVSGKRLLAGDSVLFIRDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAA 261

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 302
           HAAA NS FTVF+NPRASPSEFVIPL KY KAV   ++S+GMRFRM+FETEES  RRYMG
Sbjct: 262 HAAANNSPFTVFYNPRASPSEFVIPLAKYYKAVSANQISLGMRFRMMFETEESGTRRYMG 321

Query: 303 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSLFPLRL 361
           TITGISDLDPVRW  S WR+++VGWDEST GER+ RVS+WEIEP+   F + P  F LR 
Sbjct: 322 TITGISDLDPVRWKGSQWRNLQVGWDESTGGERRNRVSVWEIEPVIAPFFICPPPF-LRS 380

Query: 362 KRPWHP 367
           KRP  P
Sbjct: 381 KRPRQP 386



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 56/93 (60%), Positives = 76/93 (81%)

Query: 679  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 738
            RT+ KVYK G+VGRS+DI+R+S Y+EL+++L + FGIEG+ ED  + GW+LV+VD ENDV
Sbjct: 995  RTYTKVYKRGAVGRSIDIARYSGYDELKQDLARRFGIEGQLEDRQKIGWKLVYVDHENDV 1054

Query: 739  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 771
            LL+GDDPW+ FV+ V  IKILSP++VQ+M   G
Sbjct: 1055 LLVGDDPWDDFVNCVRSIKILSPQEVQQMSLDG 1087


>gi|302142628|emb|CBI19831.3| unnamed protein product [Vitis vinifera]
          Length = 907

 Score =  508 bits (1307), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 254/370 (68%), Positives = 299/370 (80%), Gaps = 9/370 (2%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G  K +NSELWHACAGPLVSLP VG+ V YFPQGHSEQVA +T +   S IPNYPNLP Q
Sbjct: 37  GPRKAINSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAVSTKRTATSQIPNYPNLPSQ 96

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGI-PSKQPTNYFCKTLTA 121
           L+CQ+HNVT+HAD +TDE+YAQM+LQP++ E  KD F   + G+ PSK P+ +FCKTLTA
Sbjct: 97  LMCQVHNVTLHADKDTDEIYAQMSLQPVNSE--KDIFPIPDFGLKPSKHPSEFFCKTLTA 154

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAEK+FP LD+S+QPP QELI RDLHD+ + FRHI+RGQPKRHLLT
Sbjct: 155 SDTSTHGGFSVPRRAAEKLFPPLDYSMQPPTQELIVRDLHDITYTFRHIYRGQPKRHLLT 214

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWSVFVSAKRL AGD+VLFI +EK+QLLLG+RRA R  T +PSSVLS+DSMHIG+LAAA
Sbjct: 215 TGWSVFVSAKRLRAGDAVLFIRDEKSQLLLGVRRANRQQTSLPSSVLSADSMHIGVLAAA 274

Query: 242 AHAAATNSCFTVFFNPR-----ASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS 296
           AHAAA  S FT+F+NPR     A PSEFVIPL KY K+V+ T++SVGMRF M+FETEES 
Sbjct: 275 AHAAANRSPFTIFYNPRHAFFLACPSEFVIPLAKYRKSVYGTQISVGMRFGMMFETEESG 334

Query: 297 VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSL 356
            RRYMGTI GISDLDP+ W  S WR+++V WDES  G++Q RVS WEIE   +  ++PSL
Sbjct: 335 KRRYMGTIVGISDLDPLSWPGSKWRNLQVEWDESGCGDKQSRVSSWEIETPESLFIFPSL 394

Query: 357 FPLRLKRPWH 366
               LKRP H
Sbjct: 395 TS-SLKRPMH 403



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 60/114 (52%), Positives = 77/114 (67%), Gaps = 1/114 (0%)

Query: 661 DSSELLHNVG-QIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKF 719
           D S LL N   Q     P RT+ KV K GSVGRS+D++ F +Y EL   +  MFG+EG  
Sbjct: 778 DESSLLQNSSWQQVAPPPMRTYTKVQKMGSVGRSIDVASFKNYEELCSAIECMFGLEGLL 837

Query: 720 EDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVE 773
            D   SGW+LV+VD ENDVLL+GDDPW+ FV  V  I+ILSP +VQ+M E+G++
Sbjct: 838 NDQKGSGWKLVYVDYENDVLLVGDDPWKEFVGCVRCIRILSPSEVQQMSEEGMQ 891


>gi|302808971|ref|XP_002986179.1| hypothetical protein SELMODRAFT_182255 [Selaginella moellendorffii]
 gi|300146038|gb|EFJ12710.1| hypothetical protein SELMODRAFT_182255 [Selaginella moellendorffii]
          Length = 961

 Score =  507 bits (1306), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 277/445 (62%), Positives = 329/445 (73%), Gaps = 15/445 (3%)

Query: 1   MIGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKE--VDSHIPNYPN 58
           + G+ K +N+ LW  CAGPLV+LPTVG+ VVYFPQGHSEQV A+T ++  V++ IPNYPN
Sbjct: 5   LAGEKKAMNTALWLECAGPLVTLPTVGSHVVYFPQGHSEQVVASTTQKDGVEAEIPNYPN 64

Query: 59  LPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKT 118
           LP  LIC LHN+T+HAD +TDEVYAQMTLQP+  +  K+ F+  +LGI  KQ T  FCKT
Sbjct: 65  LPAHLICHLHNITLHADPDTDEVYAQMTLQPV--QNDKEPFLTPDLGIQPKQQTLSFCKT 122

Query: 119 LTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRH 178
           LTASDTSTHGGFS+PRRAAEKVFP LDF+ QPPAQEL+A+DLH+ +W FRHI+RGQP+RH
Sbjct: 123 LTASDTSTHGGFSIPRRAAEKVFPPLDFTKQPPAQELVAKDLHNQQWTFRHIYRGQPRRH 182

Query: 179 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLL 238
           LLTTGWSVFVSAKRL AGD+VLFI +E N LLLGIRRA R    +PSS+LSSDSM IG+L
Sbjct: 183 LLTTGWSVFVSAKRLQAGDTVLFIRDENNHLLLGIRRANRQQANVPSSLLSSDSMLIGVL 242

Query: 239 AAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVR 298
           AAAAHAA TNS FT+F+NPRAS SEFV+P  ++ KA +H RV+VGMRFRM  ETE+SS R
Sbjct: 243 AAAAHAATTNSRFTIFYNPRASFSEFVVPFCRFSKATYHPRVTVGMRFRMELETEDSSTR 302

Query: 299 RYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT--FPMYPSL 356
           RYMGTITGI DLD VRW NS WR++KVGWDESTAG+RQ RVSLWEIEPLT   FP   SL
Sbjct: 303 RYMGTITGIGDLDSVRWPNSLWRTLKVGWDESTAGQRQKRVSLWEIEPLTAPYFPCTSSL 362

Query: 357 FPLRLKRPWHPSTSSFN----DNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWM--Q 410
           F LR KR       SF     D  D   S + W R   G+  +  LN   L +  W+  Q
Sbjct: 363 F-LR-KRTRLDGMLSFCAGELDELDAIRSQV-WARAEDGKMDIRALNAAGLSLEHWLRFQ 419

Query: 411 QRVEPSFLGNDHNQQYQAMLAAGMQ 435
            + E +         Y+AM A  +Q
Sbjct: 420 HKPEAAIATASQPDYYRAMAAQALQ 444



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 65/129 (50%), Positives = 85/129 (65%), Gaps = 11/129 (8%)

Query: 676 TPTRTFVKV-YKSGSVGRSLDISRFSSYNELREELGQMFGIEGKF-EDPLRSGWQLVFVD 733
           +P RTF KV YK+GSVGRS+D++R  +Y ELR ++ +MF +EG+   D  RS WQLVFVD
Sbjct: 822 SPMRTFTKVVYKTGSVGRSIDVTRLKNYEELRRDIARMFNLEGQLLMDSCRSSWQLVFVD 881

Query: 734 RENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQR---------AN 784
            E DVLL+GDDPWE FV  V +IKILSP +VQ++  + +ES +    QR         AN
Sbjct: 882 YEGDVLLVGDDPWEEFVGCVRFIKILSPSEVQQLNRENLESIAAVPNQRQTSSSSDDCAN 941

Query: 785 SRGNCGRDP 793
              N  +DP
Sbjct: 942 PTNNFAQDP 950


>gi|379323238|gb|AFD01318.1| auxin response factor 19-2 [Brassica rapa subsp. pekinensis]
          Length = 1049

 Score =  507 bits (1305), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 261/412 (63%), Positives = 319/412 (77%), Gaps = 11/412 (2%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ K +NS+LWHACAGPLVSLP VG+ VVYFPQGHSEQVAA+  K+ D  IPNYPNLP +
Sbjct: 15  GEKKAINSQLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKQTD-FIPNYPNLPSK 73

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP-SKQPTNYFCKTLTA 121
           LIC LH+VT+HAD ETDEVYAQMTLQP++ +  ++  +  ++G+  ++QPT +FCKTLTA
Sbjct: 74  LICLLHSVTLHADTETDEVYAQMTLQPVN-KYDREALLASDMGLKINRQPTEFFCKTLTA 132

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAEK+FP LDFS+QPPAQE++A+DLHD  W FRHI+RGQPKRHLLT
Sbjct: 133 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRGQPKRHLLT 192

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWSVFVS KRL AGDSVLF+ +EK+QL LGIRRA R    + SSV+SSDSMHIG+LAAA
Sbjct: 193 TGWSVFVSTKRLFAGDSVLFVRDEKSQLTLGIRRANRQTPTLSSSVISSDSMHIGILAAA 252

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           AHA A +S FT+FFNPRASPSEFV+PL KY KA++  +VS+GMRFRM+FETE+  VRRYM
Sbjct: 253 AHANANSSPFTIFFNPRASPSEFVVPLAKYNKALY-AQVSLGMRFRMMFETEDCGVRRYM 311

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRL 361
           GT+TGISDLDPVRW  S WR+++VGWDESTAG+R  RVS+WEIEP+ T P Y  + P   
Sbjct: 312 GTVTGISDLDPVRWKGSQWRNLQVGWDESTAGDRPSRVSIWEIEPVIT-PFY--ICPPPF 368

Query: 362 KRPWHPSTSSFNDNRDETASGLN----WLRGGTGEQGLTTLNFQSLGMFPWM 409
            RP +P      D+  +  +       W+    G +   +  F  L +  WM
Sbjct: 369 FRPKYPRQPGMPDDELDMENAFKRAMPWMGEEFGMKDAQSSMFPGLSLVQWM 420



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 67/142 (47%), Positives = 93/142 (65%), Gaps = 3/142 (2%)

Query: 640  GVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRF 699
            G+ S+P   SG  N + G   + S +++     +Q    RT+ KV K GSVGRS+D++R+
Sbjct: 885  GIPSIPF-KSGGSNEIGGI--NDSGIMNGGIWPNQAQRMRTYTKVQKRGSVGRSIDVTRY 941

Query: 700  SSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKIL 759
            S Y ELR +L +MFGIEG+ EDP  S W+LV+ D END+LL+GDDPWE FV+ V  IKIL
Sbjct: 942  SGYEELRNDLARMFGIEGQLEDPQISDWKLVYTDHENDILLVGDDPWEEFVNCVQNIKIL 1001

Query: 760  SPEDVQKMGEQGVESFSPSSGQ 781
            S  +VQ+M   G  +  P++ Q
Sbjct: 1002 SSAEVQQMSLDGDLAAIPTTNQ 1023


>gi|356565674|ref|XP_003551063.1| PREDICTED: uncharacterized protein LOC100816054 [Glycine max]
          Length = 1136

 Score =  507 bits (1305), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 258/352 (73%), Positives = 299/352 (84%), Gaps = 5/352 (1%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ K +NSELWHACAGPLVSLP VG+ VVYFPQGHSEQVAA+  KE D  IP+YPNLP +
Sbjct: 15  GERKTMNSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKEAD-FIPSYPNLPSK 73

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP-SKQPTNYFCKTLTA 121
           LIC LHNV +HAD ETDEVYAQMTLQP++  E K+  +  ++G+  ++QPT +FCKTLTA
Sbjct: 74  LICMLHNVALHADPETDEVYAQMTLQPVNKYE-KEAILASDIGLKQNRQPTEFFCKTLTA 132

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAEK+ P LD+S+QPPAQEL+A+DLHD  W FRHI+RGQPKRHLLT
Sbjct: 133 SDTSTHGGFSVPRRAAEKILPPLDYSMQPPAQELVAKDLHDNTWAFRHIYRGQPKRHLLT 192

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWSVFVS KRL AGDSVLFI +EK  LLLGIRRA R    + SSV+SSDSMHIG+LAAA
Sbjct: 193 TGWSVFVSTKRLFAGDSVLFIRDEKQHLLLGIRRANRQQPALSSSVISSDSMHIGILAAA 252

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           AHAAA NS FT+F+NPRASPSEFV+PL KY KA++ T+VS+GMRFRM+FETEES VR YM
Sbjct: 253 AHAAANNSPFTIFYNPRASPSEFVVPLAKYNKAMY-TQVSLGMRFRMMFETEESGVRGYM 311

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMY 353
           GTITGISDLDPVRW +S WR+++VGWDESTAGER  RVS+WEIEP+ T P Y
Sbjct: 312 GTITGISDLDPVRWKSSQWRNIQVGWDESTAGERPRRVSIWEIEPVVT-PFY 362



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 73/161 (45%), Positives = 96/161 (59%), Gaps = 17/161 (10%)

Query: 640  GVSSMPLGDSGFHNSMYGC-----MQDSSELLHNVGQIDQLTP-TRTFVKVYKSGSVGRS 693
            GV +MP           GC     + D+  L +N G     TP  RT+ KV K GSVGR 
Sbjct: 971  GVPNMPFKP--------GCSSDVGINDTGVLNNNNGLRTNQTPRMRTYTKVQKRGSVGRC 1022

Query: 694  LDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNV 753
            +D++R+  Y+ELR +L +MFGIEG+ EDPLR+ W+LV+VD END+LL+GDDPW+ FVS V
Sbjct: 1023 IDVTRYKGYDELRHDLARMFGIEGQLEDPLRTDWKLVYVDHENDILLVGDDPWDEFVSCV 1082

Query: 754  WYIKILSPEDVQKM---GEQGVESFSPSSGQRANSRGNCGR 791
              IKILS  +VQ+M   G+ G     P+        GN  R
Sbjct: 1083 QSIKILSSAEVQQMSLDGDLGGNVPIPNQACSGTDSGNAWR 1123


>gi|47496694|dbj|BAD19062.1| auxin response factor 2 [Cucumis sativus]
          Length = 1107

 Score =  505 bits (1301), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 260/366 (71%), Positives = 299/366 (81%), Gaps = 4/366 (1%)

Query: 4   DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQL 63
           + K +N ELW ACAGPLV+LP  G  VVYFPQGHSEQVAA+  K+VD  +PNYP+L  +L
Sbjct: 23  EKKIINPELWQACAGPLVNLPPAGYHVVYFPQGHSEQVAASLRKDVDGQVPNYPSLASKL 82

Query: 64  ICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPT-NYFCKTLTAS 122
           +C LHNVT+HAD ETDEVYAQMTL P+   + KD  +  +L + S +P   +FCKTLTAS
Sbjct: 83  LCLLHNVTLHADPETDEVYAQMTLLPVLSFD-KDALLRSDLALKSNKPQPEFFCKTLTAS 141

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSVPRRAAEK+FP LDFS+QPPAQEL+A+DLHD  W FRHI+RGQPKRHLLTT
Sbjct: 142 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVAKDLHDNVWTFRHIYRGQPKRHLLTT 201

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWS+FVS KRL+AGDSVLFI +EK QLLLGIRRA R PT + SSVLSSDSMHIG+LAAAA
Sbjct: 202 GWSLFVSGKRLLAGDSVLFIRDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAA 261

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 302
           HAAA NS FTVF+NPRASPSEFVIPL KY KAV   ++S+GMRFRM+FETEES  RRYMG
Sbjct: 262 HAAANNSPFTVFYNPRASPSEFVIPLAKYYKAVSANQISLGMRFRMMFETEESGTRRYMG 321

Query: 303 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSLFPLRL 361
           TITGISDLDPVRW  S WR+++VGWDEST GER+ RVS+WEIEP+   F + P  F LR 
Sbjct: 322 TITGISDLDPVRWKGSQWRNLQVGWDESTGGERRNRVSVWEIEPVIAPFFICPPPF-LRS 380

Query: 362 KRPWHP 367
           KRP  P
Sbjct: 381 KRPRQP 386



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 56/93 (60%), Positives = 76/93 (81%)

Query: 679  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 738
            RT+ KVYK G+VGRS+DI+R+S Y+EL+++L + FGIEG+ ED  + GW+LV+VD ENDV
Sbjct: 995  RTYTKVYKRGAVGRSIDIARYSGYDELKQDLARRFGIEGQLEDRQKIGWKLVYVDHENDV 1054

Query: 739  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 771
            LL+GDDPW+ FV+ V  IKILSP++VQ+M   G
Sbjct: 1055 LLVGDDPWDDFVNCVRSIKILSPQEVQQMSLDG 1087


>gi|302806481|ref|XP_002984990.1| hypothetical protein SELMODRAFT_181404 [Selaginella moellendorffii]
 gi|300147200|gb|EFJ13865.1| hypothetical protein SELMODRAFT_181404 [Selaginella moellendorffii]
          Length = 958

 Score =  505 bits (1300), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 276/445 (62%), Positives = 329/445 (73%), Gaps = 15/445 (3%)

Query: 1   MIGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKE--VDSHIPNYPN 58
           + G+ K +N+ LW  CAGPLV+LPTVG+ VVYFPQGHSEQV A+T ++  V++ IPNYP+
Sbjct: 5   LAGEKKAMNTALWLECAGPLVTLPTVGSHVVYFPQGHSEQVVASTTQKDGVEAEIPNYPS 64

Query: 59  LPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKT 118
           LP  LIC LHN+T+HAD +TDEVYAQMTLQP+  +  K+ F+  +LGI  KQ T  FCKT
Sbjct: 65  LPAHLICHLHNITLHADPDTDEVYAQMTLQPV--QNDKEPFLTPDLGIQPKQQTLSFCKT 122

Query: 119 LTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRH 178
           LTASDTSTHGGFS+PRRAAEKVFP LDF+ QPPAQEL+A+DLH+ +W FRHI+RGQP+RH
Sbjct: 123 LTASDTSTHGGFSIPRRAAEKVFPPLDFTKQPPAQELVAKDLHNQQWTFRHIYRGQPRRH 182

Query: 179 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLL 238
           LLTTGWSVFVSAKRL AGD+VLFI +E N LLLGIRRA R    +PSS+LSSDSM IG+L
Sbjct: 183 LLTTGWSVFVSAKRLQAGDTVLFIRDENNHLLLGIRRANRQQANVPSSLLSSDSMLIGVL 242

Query: 239 AAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVR 298
           AAAAHAA TNS FT+F+NPRAS SEFV+P  ++ KA +H RV+VGMRFRM  ETE+SS R
Sbjct: 243 AAAAHAATTNSRFTIFYNPRASFSEFVVPFCRFSKATYHPRVTVGMRFRMELETEDSSTR 302

Query: 299 RYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT--FPMYPSL 356
           RYMGTITGI DLD VRW NS WR++KVGWDESTAG+RQ RVSLWEIEPLT   FP   SL
Sbjct: 303 RYMGTITGIGDLDSVRWPNSLWRTLKVGWDESTAGQRQRRVSLWEIEPLTAPYFPCTSSL 362

Query: 357 FPLRLKRPWHPSTSSFN----DNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWM--Q 410
           F LR KR       SF     D  D   S + W R   G+  +  LN   L +  W+  Q
Sbjct: 363 F-LR-KRTRLDGMLSFCAGELDELDAIRSQV-WARAEDGKMDIRALNAAGLSLEHWLRFQ 419

Query: 411 QRVEPSFLGNDHNQQYQAMLAAGMQ 435
            + E +         Y+AM A  +Q
Sbjct: 420 HKPEAAIATASQPDYYRAMAAQALQ 444



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 65/129 (50%), Positives = 85/129 (65%), Gaps = 11/129 (8%)

Query: 676 TPTRTFVKV-YKSGSVGRSLDISRFSSYNELREELGQMFGIEGKF-EDPLRSGWQLVFVD 733
           +P RTF KV YK+GSVGRS+D++R  +Y ELR ++ +MF +EG+   D  RS WQLVFVD
Sbjct: 819 SPMRTFTKVVYKTGSVGRSIDVTRLKNYEELRRDIARMFNLEGQLLMDSCRSSWQLVFVD 878

Query: 734 RENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQR---------AN 784
            E DVLL+GDDPWE FV  V +IKILSP +VQ++  + +ES +    QR         AN
Sbjct: 879 YEGDVLLVGDDPWEEFVGCVRFIKILSPSEVQQLNRENLESIAAVPNQRQTSSSSDDCAN 938

Query: 785 SRGNCGRDP 793
              N  +DP
Sbjct: 939 PTNNFAQDP 947


>gi|356556410|ref|XP_003546519.1| PREDICTED: uncharacterized protein LOC100815277 [Glycine max]
          Length = 1122

 Score =  505 bits (1300), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 267/412 (64%), Positives = 318/412 (77%), Gaps = 11/412 (2%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ K +NSELWHACAGPLVSLP VG+ VVYFPQGHSEQVAA+  KE D  IP+YPNLP +
Sbjct: 15  GERKTINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKEAD-FIPSYPNLPSK 73

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP-SKQPTNYFCKTLTA 121
           LIC LHNV +HAD ETDEVYAQMTLQP++ +  K+  +  ++G+  ++QPT +FCKTLTA
Sbjct: 74  LICMLHNVALHADPETDEVYAQMTLQPVN-KYDKEAILASDMGLKQNQQPTEFFCKTLTA 132

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAEK+FP LDFS+QPPAQE++A+DLHD  W FRHI+RGQPKRHLLT
Sbjct: 133 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDNTWTFRHIYRGQPKRHLLT 192

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWSVFVS KRL AGDSVLFI +EK QLLLGI+RA R    + SSV+SSDSMHIG+LAAA
Sbjct: 193 TGWSVFVSTKRLFAGDSVLFIRDEKQQLLLGIKRANRQQPALSSSVISSDSMHIGILAAA 252

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           AHAA+ NS FT+F+NPRASPSEFVIP  KY KA+++   S+GMRFRM+FETEES VRRYM
Sbjct: 253 AHAASNNSPFTIFYNPRASPSEFVIPSAKYNKALYN-HASLGMRFRMMFETEESGVRRYM 311

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMY----PSLF 357
           GTITGI+D+DPVRW NS WR+++VGWDESTAGER  RVS+W+IEP+ T P Y    P   
Sbjct: 312 GTITGITDVDPVRWKNSQWRNLQVGWDESTAGERPSRVSIWDIEPVVT-PFYICPPPFFR 370

Query: 358 PLRLKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWM 409
           P   K P  P   S  D  +     + WL    G +  ++  F    +  WM
Sbjct: 371 PKFPKEPGMPDDES--DIENAFKRAMPWLGDDLGMKDASSSVFPGFSLMQWM 420



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 66/136 (48%), Positives = 86/136 (63%), Gaps = 4/136 (2%)

Query: 657  GCMQDSS----ELLHNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQM 712
            GC  D +     +L+N    +Q    RT+ KV K GSVGR +D++R+  Y+ELR +L +M
Sbjct: 969  GCSSDIAINDPGVLNNGLWANQTQRMRTYTKVQKCGSVGRCIDVTRYKGYDELRHDLARM 1028

Query: 713  FGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGV 772
            FGIEG+ EDP R+ W+LV+VD END+LL+GDDPWE FVS V  IKILS  +VQKM   G 
Sbjct: 1029 FGIEGQLEDPQRTEWKLVYVDHENDILLVGDDPWEEFVSCVQSIKILSSAEVQKMSLDGD 1088

Query: 773  ESFSPSSGQRANSRGN 788
                P   Q  +   N
Sbjct: 1089 LGHVPVPNQACSGTDN 1104


>gi|449460205|ref|XP_004147836.1| PREDICTED: auxin response factor 5-like [Cucumis sativus]
 gi|449476870|ref|XP_004154860.1| PREDICTED: auxin response factor 5-like [Cucumis sativus]
          Length = 949

 Score =  504 bits (1298), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 248/365 (67%), Positives = 293/365 (80%), Gaps = 4/365 (1%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G  K +NSELWHACAGPLVSLP VG+ V YFPQGHSEQVA +T +   S IPNYPNLP Q
Sbjct: 38  GARKAINSELWHACAGPLVSLPHVGSLVYYFPQGHSEQVAVSTKRTATSQIPNYPNLPSQ 97

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGI-PSKQPTNYFCKTLTA 121
           L+CQ+ NVT+HAD ++DE+YAQM+LQP++ E  KD F+  + G+ PSK P  +FCKTLTA
Sbjct: 98  LMCQVQNVTLHADKDSDEIYAQMSLQPVNSE--KDVFLVPDFGLRPSKHPNEFFCKTLTA 155

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAEK+FP LD+++QPP QELI RDLHD  W FRHI+RGQPKRHLLT
Sbjct: 156 SDTSTHGGFSVPRRAAEKLFPPLDYTMQPPTQELIVRDLHDNTWTFRHIYRGQPKRHLLT 215

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWS+FV AKRL AGDSVLFI +EK+QLL+G+RRA R  T +PSSVLS+DSMHIG+LAAA
Sbjct: 216 TGWSLFVGAKRLRAGDSVLFIRDEKSQLLIGVRRANRQQTTLPSSVLSADSMHIGVLAAA 275

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           AHAAA  S FT+F+NPRA PSEFVIPL KY K V+ T++S GMRF M+FETEES  RRYM
Sbjct: 276 AHAAANRSPFTIFYNPRACPSEFVIPLAKYRKCVYGTQLSAGMRFGMMFETEESGKRRYM 335

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRL 361
           GTI GISDLDP+RW  S WR+++V WDE    ++Q RVS WEIE   +  ++PSL    L
Sbjct: 336 GTIVGISDLDPLRWPGSKWRNLQVEWDEPGCCDKQNRVSSWEIETPESLFIFPSLTS-GL 394

Query: 362 KRPWH 366
           KRP H
Sbjct: 395 KRPLH 399



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 73/155 (47%), Positives = 98/155 (63%), Gaps = 11/155 (7%)

Query: 641 VSSMPLGDS------GFHNSMYG---CMQDSSE--LLHNVGQIDQLTPTRTFVKVYKSGS 689
           ++S  LGDS       FH++  G   C  D  E  LL N      + P RT+ KV K+GS
Sbjct: 786 ITSASLGDSQAFSRQEFHDNSAGTSSCNVDFDEGSLLQNGSWKQVVPPLRTYTKVQKAGS 845

Query: 690 VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAF 749
           VGRS+D++ F +Y+EL   +  MFG+EG   DP  SGW+LV+VD ENDVLL+GDDPWE F
Sbjct: 846 VGRSIDVTSFKNYDELCSAIECMFGLEGLLNDPRGSGWKLVYVDYENDVLLIGDDPWEEF 905

Query: 750 VSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRAN 784
           VS V  I+ILSP +VQ+M E+G++  + +  Q  N
Sbjct: 906 VSCVRCIRILSPSEVQQMSEEGMKLLNSAMMQGIN 940


>gi|255538886|ref|XP_002510508.1| Auxin response factor, putative [Ricinus communis]
 gi|223551209|gb|EEF52695.1| Auxin response factor, putative [Ricinus communis]
          Length = 950

 Score =  504 bits (1297), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 249/365 (68%), Positives = 293/365 (80%), Gaps = 4/365 (1%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G  K +NSELW+ACAGPLVSLP VG+ V YFPQGHSEQVA +T +   S IPNYPNL  Q
Sbjct: 37  GTRKTINSELWYACAGPLVSLPQVGSLVYYFPQGHSEQVAVSTKRTATSQIPNYPNLASQ 96

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGI-PSKQPTNYFCKTLTA 121
           L+CQ+HNVT+HAD +TDE+YAQM+LQP++ E  KD F   + G+ PSK P+ +FCKTLTA
Sbjct: 97  LLCQVHNVTLHADRDTDEIYAQMSLQPVNSE--KDVFPIPDFGLKPSKHPSEFFCKTLTA 154

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAEK+FP LD+++QPP QEL+ RDLHD  W FRHI+RGQPKRHLLT
Sbjct: 155 SDTSTHGGFSVPRRAAEKLFPPLDYTMQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLT 214

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWS+FV +KRL AGDSVLFI +EK+QLL+G+RRA R  T +PS VLS+DSMHIG+LAAA
Sbjct: 215 TGWSLFVGSKRLKAGDSVLFIRDEKSQLLVGVRRANRQQTTLPSLVLSADSMHIGVLAAA 274

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           AHAAA  S FT+F+NPRA PSEFVIPL KY KAVF T+VSVGMRF M+FETEES  RRYM
Sbjct: 275 AHAAANRSPFTIFYNPRACPSEFVIPLAKYRKAVFGTQVSVGMRFGMMFETEESGKRRYM 334

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRL 361
           GTI GISDLDP+RW  S WR+++V WDE    ++Q RVS WEIE      ++PSL    L
Sbjct: 335 GTIVGISDLDPLRWPGSKWRNLQVEWDEPGCSDKQNRVSSWEIETPENLFIFPSLTS-GL 393

Query: 362 KRPWH 366
           KRP H
Sbjct: 394 KRPLH 398



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 57/101 (56%), Positives = 75/101 (74%), Gaps = 1/101 (0%)

Query: 674 QLTP-TRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFV 732
           Q+ P  RT+ KV K+GSVGRS+D+S F +Y EL   +  MFG+EG   +P  SGW+LV+V
Sbjct: 830 QVAPRVRTYTKVQKAGSVGRSIDVSGFKNYEELCSAIECMFGLEGLLNNPRESGWKLVYV 889

Query: 733 DRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVE 773
           D ENDVLL+GDDPWE FV  V  I+ILSP +VQ+M E+G++
Sbjct: 890 DYENDVLLIGDDPWEEFVGCVRCIRILSPSEVQQMSEEGMK 930


>gi|379323236|gb|AFD01317.1| auxin response factor 19-1 [Brassica rapa subsp. pekinensis]
          Length = 1020

 Score =  504 bits (1297), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 260/412 (63%), Positives = 319/412 (77%), Gaps = 11/412 (2%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ K +NS+LWHACAGPLVSLP VG+ VVYFPQGHSEQVAA+  K+ D  IPNYPNLP +
Sbjct: 15  GEKKPINSQLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKQTD-FIPNYPNLPSK 73

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP-SKQPTNYFCKTLTA 121
           LIC LH+VT+HAD ETDEVYAQMTLQP++ +  ++  +  ++G+  ++QPT +FCKTLTA
Sbjct: 74  LICLLHSVTLHADTETDEVYAQMTLQPVN-KYDREALLASDMGLKLNRQPTEFFCKTLTA 132

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAEK+FP LDFS+QPPAQE++A+DLHD  W FRHI+RGQPKRHLLT
Sbjct: 133 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRGQPKRHLLT 192

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWSVFVS KRL+AGDSVLF+ +EK+QL L IRRA R    + SSV+SSDSMHIG+LAAA
Sbjct: 193 TGWSVFVSTKRLIAGDSVLFVRDEKSQLTLVIRRANRQTPTLSSSVISSDSMHIGILAAA 252

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           AHA A NS FT+FFNPRASPSEFV+PL KY KA++  +VS+GMRFRM+FETE+  VRRYM
Sbjct: 253 AHANANNSPFTIFFNPRASPSEFVVPLAKYNKALY-AQVSLGMRFRMMFETEDCGVRRYM 311

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRL 361
           GT+TG+SDLDPVRW  S WR+++VGWDESTAG+R  RVS+WEIEP+ T P Y  + P   
Sbjct: 312 GTVTGVSDLDPVRWKGSQWRNLQVGWDESTAGDRPSRVSVWEIEPVIT-PFY--ICPPPF 368

Query: 362 KRPWHPSTSSFNDNRDETASGLN----WLRGGTGEQGLTTLNFQSLGMFPWM 409
            RP +P      D+  +  +       W+    G +   +  F  L +  WM
Sbjct: 369 FRPKYPRQPGMPDDELDMENAFKRAMPWMGEEFGMKDAQSSMFPGLSLVQWM 420



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 68/144 (47%), Positives = 95/144 (65%), Gaps = 6/144 (4%)

Query: 640 GVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQI--DQLTPTRTFVKVYKSGSVGRSLDIS 697
           G+ S+P    G  ++  G + DS   + N G +  +Q    RT+ KV K GSVGRS+D++
Sbjct: 855 GIPSIPFKSGG--SNEIGGVNDSG--IMNGGGLWPNQAQRMRTYTKVQKRGSVGRSIDVT 910

Query: 698 RFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIK 757
           R+S Y+ELR +L +MFGIEG+ EDP  S W+LV+ D END+LL+GDDPWE FV+ V  IK
Sbjct: 911 RYSGYDELRNDLARMFGIEGQLEDPRPSDWKLVYTDHENDILLVGDDPWEEFVNCVQNIK 970

Query: 758 ILSPEDVQKMGEQGVESFSPSSGQ 781
           ILS  +VQ+M   G  +  P++ Q
Sbjct: 971 ILSSVEVQQMSLDGDLAAIPATNQ 994


>gi|224142772|ref|XP_002324725.1| predicted protein [Populus trichocarpa]
 gi|222866159|gb|EEF03290.1| predicted protein [Populus trichocarpa]
          Length = 1047

 Score =  503 bits (1295), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 271/412 (65%), Positives = 318/412 (77%), Gaps = 11/412 (2%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ K +NSELWHACAGPLVSLP VG+ VVYFPQGHSEQVAA+  KE D  +P+YPNL  +
Sbjct: 15  GERKSINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKETD-FVPSYPNLTSK 73

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP-SKQPTNYFCKTLTA 121
           LIC LHNVT+HADVETDEVYAQMTLQP+S +  K+  +  +LG   S+QPT +FCKTLTA
Sbjct: 74  LICMLHNVTLHADVETDEVYAQMTLQPVS-KYDKEALLASDLGQKQSRQPTEFFCKTLTA 132

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGF VPRRAAEK+FP LDFS+QPPAQEL+ARDLHD  W FRHI+RGQPKRHLLT
Sbjct: 133 SDTSTHGGFFVPRRAAEKIFPPLDFSMQPPAQELVARDLHDNTWTFRHIYRGQPKRHLLT 192

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWSVFVS KR+  GDSVLFI +EK+QLLLGIR A R    + SS++SSDSMHIG+LAAA
Sbjct: 193 TGWSVFVSTKRIFTGDSVLFIRDEKSQLLLGIRHANRQQPALSSSLISSDSMHIGILAAA 252

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           AHAAA NS FT+F+NP ASPSEFVIP +KY KA++ T+ S+GMRFRM+F TEES VRRYM
Sbjct: 253 AHAAANNSPFTIFYNPSASPSEFVIPFSKYNKAMY-TQGSLGMRFRMMFTTEESGVRRYM 311

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMY----PSLF 357
           GTITGISDLDPVRW NS WR+++VGWDESTA ER  RVS+WEIEP+ T P Y    P   
Sbjct: 312 GTITGISDLDPVRWKNSQWRNLQVGWDESTASERPNRVSIWEIEPVVT-PFYICPPPFFR 370

Query: 358 PLRLKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWM 409
           P   K+P  P+  S  D  +     + WL    G++   +  F  L +  WM
Sbjct: 371 PKFPKQPGMPNDES--DTENAFKRAVPWLGDEFGKKDAASSIFPGLSLVQWM 420



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 65/132 (49%), Positives = 89/132 (67%), Gaps = 4/132 (3%)

Query: 640  GVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRF 699
            GVS++P    G ++       + + +L+N    +Q    RT+ KV K GSVGRS+DI+ +
Sbjct: 896  GVSNIPFKPDGSND----IAINDTGILNNGAWTNQNQRMRTYTKVQKRGSVGRSIDITCY 951

Query: 700  SSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKIL 759
              Y+ELR +L +MFGIEG+ EDP  S W+LV+VDREND+LL+GDDPWE F+S V  IKIL
Sbjct: 952  KGYDELRHDLARMFGIEGQLEDPQSSDWKLVYVDRENDILLVGDDPWEEFMSCVQSIKIL 1011

Query: 760  SPEDVQKMGEQG 771
            S  +VQ+M   G
Sbjct: 1012 SSAEVQQMSLDG 1023


>gi|326498543|dbj|BAJ98699.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1176

 Score =  502 bits (1293), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 249/359 (69%), Positives = 294/359 (81%), Gaps = 2/359 (0%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
            +NS+LWHACAGPLV LP  G+ VVYFPQGHSEQVAA+  K+VD+H+PNYPNLP +LIC 
Sbjct: 38  AINSDLWHACAGPLVQLPPAGSLVVYFPQGHSEQVAASMQKDVDAHVPNYPNLPSKLICL 97

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTN-YFCKTLTASDTS 125
           LHN+T+HAD+ETDEVYA+MTLQP++    K+     EL +   +P N +FCKTLTASDTS
Sbjct: 98  LHNITLHADLETDEVYARMTLQPVT-SYGKEALQLSELALKQARPQNEFFCKTLTASDTS 156

Query: 126 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 185
           THGGFSVPRR+AEK+FP LDFS+QPPAQE+ ARDLHD  W FRHI+RGQPKRHLLTTGWS
Sbjct: 157 THGGFSVPRRSAEKIFPPLDFSMQPPAQEIQARDLHDNVWTFRHIYRGQPKRHLLTTGWS 216

Query: 186 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 245
           +FVS KRL AGDSV+F+ +E+ QLLLGIRRA R PT + SSVLSSDSMHIG+LAAAAHAA
Sbjct: 217 LFVSGKRLFAGDSVIFVRDERQQLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHAA 276

Query: 246 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 305
           A NS FT+F+NPRASP+EFVIP  KY KAV+  ++S+GMRFRM+FETEE   RRYMGTIT
Sbjct: 277 ANNSPFTIFYNPRASPTEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEELGTRRYMGTIT 336

Query: 306 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRP 364
           GI+DLDPVRW NS WR+++VGWDES AGER+ RVS+WEIEP+              KRP
Sbjct: 337 GINDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAAPFFICPPPFFGAKRP 395



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 54/93 (58%), Positives = 73/93 (78%)

Query: 679  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 738
            RTF KVYK G+VGRS+DIS+++ Y EL++ L +MF IEG+ E+  R GW+LV+ D E+D+
Sbjct: 1042 RTFTKVYKRGAVGRSIDISQYAGYEELKQALARMFSIEGQLEERQRIGWKLVYRDHEDDI 1101

Query: 739  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 771
            LLLGDDPWE FV+ V  I+ILSP++VQ+M   G
Sbjct: 1102 LLLGDDPWEEFVNCVKCIRILSPQEVQQMSLDG 1134


>gi|326529041|dbj|BAK00914.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1176

 Score =  502 bits (1293), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 249/359 (69%), Positives = 294/359 (81%), Gaps = 2/359 (0%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
            +NS+LWHACAGPLV LP  G+ VVYFPQGHSEQVAA+  K+VD+H+PNYPNLP +LIC 
Sbjct: 38  AINSDLWHACAGPLVQLPPAGSLVVYFPQGHSEQVAASMQKDVDAHVPNYPNLPSKLICL 97

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTN-YFCKTLTASDTS 125
           LHN+T+HAD+ETDEVYA+MTLQP++    K+     EL +   +P N +FCKTLTASDTS
Sbjct: 98  LHNITLHADLETDEVYARMTLQPVT-SYGKEALQLSELALKQARPQNEFFCKTLTASDTS 156

Query: 126 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 185
           THGGFSVPRR+AEK+FP LDFS+QPPAQE+ ARDLHD  W FRHI+RGQPKRHLLTTGWS
Sbjct: 157 THGGFSVPRRSAEKIFPPLDFSMQPPAQEIQARDLHDNVWTFRHIYRGQPKRHLLTTGWS 216

Query: 186 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 245
           +FVS KRL AGDSV+F+ +E+ QLLLGIRRA R PT + SSVLSSDSMHIG+LAAAAHAA
Sbjct: 217 LFVSGKRLFAGDSVIFVRDERQQLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHAA 276

Query: 246 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 305
           A NS FT+F+NPRASP+EFVIP  KY KAV+  ++S+GMRFRM+FETEE   RRYMGTIT
Sbjct: 277 ANNSPFTIFYNPRASPTEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEELGTRRYMGTIT 336

Query: 306 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRP 364
           GI+DLDPVRW NS WR+++VGWDES AGER+ RVS+WEIEP+              KRP
Sbjct: 337 GINDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAAPFFICPPPFFGAKRP 395



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 54/93 (58%), Positives = 73/93 (78%)

Query: 679  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 738
            RTF KVYK G+VGRS+DIS+++ Y EL++ L +MF IEG+ E+  R GW+LV+ D E+D+
Sbjct: 1042 RTFTKVYKRGAVGRSIDISQYAGYEELKQALARMFSIEGQLEERQRIGWKLVYRDHEDDI 1101

Query: 739  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 771
            LLLGDDPWE FV+ V  I+ILSP++VQ+M   G
Sbjct: 1102 LLLGDDPWEEFVNCVKCIRILSPQEVQQMSLDG 1134


>gi|356564347|ref|XP_003550416.1| PREDICTED: auxin response factor 5-like [Glycine max]
          Length = 934

 Score =  500 bits (1288), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 248/363 (68%), Positives = 293/363 (80%), Gaps = 4/363 (1%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G  K LNSELWHACAGPLVSLP VG+ V YFPQGHSEQVAA+T +   S IPNYPNLP Q
Sbjct: 39  GVRKTLNSELWHACAGPLVSLPQVGSLVFYFPQGHSEQVAASTRRTATSQIPNYPNLPSQ 98

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP-SKQPTNYFCKTLTA 121
           L+CQ+ N T+HAD ETDE+YAQMTLQPL+ E  ++ F   + G+  SK P+ +FCKTLTA
Sbjct: 99  LLCQVQNATLHADKETDEIYAQMTLQPLNSE--REVFPISDFGLKHSKHPSEFFCKTLTA 156

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAEK+FP LD+++QPP QEL+ RDLHD  W FRHI+RGQPKRHLLT
Sbjct: 157 SDTSTHGGFSVPRRAAEKLFPPLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLT 216

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWS+FV +KRL AGDSVLFI +EK+QL +G+RR  R  T +PSSVLS+DSMHIG+LAAA
Sbjct: 217 TGWSLFVGSKRLRAGDSVLFIRDEKSQLRVGVRRVNRQQTTLPSSVLSADSMHIGVLAAA 276

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           AHAAA  S FT+F+NPRA PSEFVIPL KY K+VF T+VSVGMRF M+FETEES  RRYM
Sbjct: 277 AHAAANRSPFTIFYNPRACPSEFVIPLAKYRKSVFGTQVSVGMRFGMMFETEESGKRRYM 336

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRL 361
           GTI GISD+DP+RW  S WR+++V WDE   G++Q RVS+WEIE   +  ++PSL    L
Sbjct: 337 GTIVGISDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWEIETPESLFIFPSLTS-GL 395

Query: 362 KRP 364
           KRP
Sbjct: 396 KRP 398



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 59/124 (47%), Positives = 80/124 (64%)

Query: 661 DSSELLHNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFE 720
           D S  L N        P RT+ KV K+GSVGRS+D++ F +Y EL   +  MFG++G   
Sbjct: 810 DESSFLQNNSWQQVPAPIRTYTKVQKAGSVGRSIDVTTFKNYEELIRAIECMFGLDGLLN 869

Query: 721 DPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSG 780
           D   SGW+LV+VD E+DVLL+GDDPWE FV  V  I+ILSP +VQ+M E+G++  +  + 
Sbjct: 870 DTKGSGWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMSEEGMKLLNSGAL 929

Query: 781 QRAN 784
           Q  N
Sbjct: 930 QGMN 933


>gi|242094110|ref|XP_002437545.1| hypothetical protein SORBIDRAFT_10g029130 [Sorghum bicolor]
 gi|241915768|gb|EER88912.1| hypothetical protein SORBIDRAFT_10g029130 [Sorghum bicolor]
          Length = 1143

 Score =  500 bits (1288), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 248/343 (72%), Positives = 289/343 (84%), Gaps = 2/343 (0%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           +NSELWHACAGPLVSLP  G+ VVYFPQGHSEQVAA+  K+VD H+P+YPNLP +LIC L
Sbjct: 32  INSELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDGHVPSYPNLPSKLICLL 91

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQP-TNYFCKTLTASDTST 126
           HNVT+HAD ETDEVYAQMTL P++    K+     EL +   +P T +FCKTLTASDTST
Sbjct: 92  HNVTLHADPETDEVYAQMTLLPVT-SYGKEALQLSELALKQPRPQTEFFCKTLTASDTST 150

Query: 127 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 186
           HGGFSVPRRAAEK+FP LDFS+QPPAQE+ ARDLHD  W FRHI+RGQPKRHLLTTGWS+
Sbjct: 151 HGGFSVPRRAAEKIFPPLDFSMQPPAQEIQARDLHDNVWTFRHIYRGQPKRHLLTTGWSL 210

Query: 187 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 246
           FVS KRL AGDSV+F+ +E+ QLLLGIRRA R PT + SSVLSSDSMHIG+LAAAAHAAA
Sbjct: 211 FVSGKRLFAGDSVIFVRDERQQLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHAAA 270

Query: 247 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 306
            NS FT+F+NPRASP+EFV+P  KY KA++  ++S+GMRFRM+FETEE   RRYMGTITG
Sbjct: 271 NNSPFTIFYNPRASPTEFVVPFAKYQKALYGNQISLGMRFRMMFETEELGTRRYMGTITG 330

Query: 307 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT 349
           ISDLDPVRW NS WR+++VGWDES AGER+ RVS+WEIEP+  
Sbjct: 331 ISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAA 373



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 54/93 (58%), Positives = 73/93 (78%)

Query: 679  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 738
            RTF KVYK G+VGRS+DIS+F+ Y+EL+  L +MF +EG+ E+  R GW+LV+ D E+D+
Sbjct: 1010 RTFTKVYKRGAVGRSIDISQFNGYDELKHALARMFSMEGQLEERQRIGWKLVYKDHEDDI 1069

Query: 739  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 771
            LLLGDDPWE FV+ V  I+ILSP++VQ+M   G
Sbjct: 1070 LLLGDDPWEEFVNCVKCIRILSPQEVQQMSLDG 1102


>gi|27450533|gb|AAO14628.1|AF467900_5 hypothetical transcription factor [Prunus persica]
          Length = 954

 Score =  500 bits (1287), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 244/365 (66%), Positives = 290/365 (79%), Gaps = 4/365 (1%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G  K +NSELWHACAGPLV LP VG+   YFPQGHSEQVA +T +   S IPNYPNLP Q
Sbjct: 38  GSRKAINSELWHACAGPLVCLPQVGSLSYYFPQGHSEQVAVSTKRTATSQIPNYPNLPSQ 97

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGI-PSKQPTNYFCKTLTA 121
           L+CQ+ NVT+HAD ETDE+YAQM+L+P++ E  KD F   + G+ PSK P+ +FCKTLTA
Sbjct: 98  LLCQVQNVTLHADKETDEIYAQMSLKPVNSE--KDVFPVPDFGLKPSKHPSEFFCKTLTA 155

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAEK+FP LDF++QPP+QEL+ RDLHD  W FRHI+RGQPKRHLLT
Sbjct: 156 SDTSTHGGFSVPRRAAEKLFPPLDFTMQPPSQELVVRDLHDNSWTFRHIYRGQPKRHLLT 215

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWS+FV AKRL AGDSVLFI +EK+QL++G+RRA R  T +PSSVLS+DSMHIG+LAAA
Sbjct: 216 TGWSLFVGAKRLRAGDSVLFIRDEKSQLMIGVRRANRQQTTLPSSVLSADSMHIGVLAAA 275

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           AHAAA  S FT+F+NPRA PSEFVIPL  Y KA++ T++SVGMRF M+FETEES  RRYM
Sbjct: 276 AHAAANRSPFTIFYNPRACPSEFVIPLATYQKAIYGTQLSVGMRFGMMFETEESGKRRYM 335

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRL 361
           GTI   SDLDP+RW  S WR+++V WDE    ++Q RVS WEIE      ++PSL    L
Sbjct: 336 GTIVSTSDLDPLRWPGSKWRNLQVEWDEPGCCDKQNRVSSWEIETPENIFIFPSLTS-SL 394

Query: 362 KRPWH 366
           KRP H
Sbjct: 395 KRPSH 399



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 65/125 (52%), Positives = 86/125 (68%), Gaps = 1/125 (0%)

Query: 661 DSSELLHNVGQIDQLTP-TRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKF 719
           D S LL N G   Q+ P  RT+ KV K+GSVGRS+D++ F +Y EL   +  MFG+EG  
Sbjct: 821 DESSLLQNNGSWHQVVPPVRTYTKVQKTGSVGRSIDVTSFKNYEELCSAIECMFGLEGLL 880

Query: 720 EDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSS 779
            DP  SGW+LV+VD ENDVLL+GDDPWE FV  V  I+ILSP +VQ+M E+G++  + ++
Sbjct: 881 NDPRGSGWKLVYVDYENDVLLVGDDPWEEFVGCVRCIRILSPTEVQQMSEEGIKLLNSAA 940

Query: 780 GQRAN 784
            Q  N
Sbjct: 941 MQGIN 945


>gi|297850306|ref|XP_002893034.1| hypothetical protein ARALYDRAFT_335174 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338876|gb|EFH69293.1| hypothetical protein ARALYDRAFT_335174 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1096

 Score =  499 bits (1286), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 261/426 (61%), Positives = 321/426 (75%), Gaps = 25/426 (5%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ K +NS+LWHACAGPLVSLP VG+ VVYFPQGHSEQVAA+  K+ D  IPNYPNLP +
Sbjct: 15  GEKKPINSQLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKQTD-FIPNYPNLPSK 73

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP-SKQPTNYFCKTLTA 121
           LIC LH+VT+HAD ETDEVYAQMTLQP++ +  ++  +  ++G+  ++QPT +FCKTLTA
Sbjct: 74  LICLLHSVTLHADTETDEVYAQMTLQPVN-KYDREALLASDMGLKLNRQPTEFFCKTLTA 132

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAEK+FP LDFS+QPPAQE++A+DLHD  W FRHI+RGQPKRHLLT
Sbjct: 133 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRGQPKRHLLT 192

Query: 182 TGWSVFVSAKRLVAGDSVLFI-----------W---NEKNQLLLGIRRAIRPPTVMPSSV 227
           TGWSVFVS KRL AGDSVLF+           W   +EK+QL+LGIRRA R    + SSV
Sbjct: 193 TGWSVFVSTKRLFAGDSVLFVRIGLSSSHKGTWVCRDEKSQLMLGIRRANRQTPTLSSSV 252

Query: 228 LSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFR 287
           +SSDSMHIG+LAAAAHA A +S FT+FFNPRASPSEF++PL KY KA++  +VS+GMRFR
Sbjct: 253 ISSDSMHIGILAAAAHANANSSPFTIFFNPRASPSEFIVPLAKYNKALY-AQVSLGMRFR 311

Query: 288 MLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 347
           M+FETE+  VRRYMGT+TGISDLDPVRW  S WR+++VGWDESTAG+R  RVS+WEIEP+
Sbjct: 312 MMFETEDCGVRRYMGTVTGISDLDPVRWKGSQWRNLQVGWDESTAGDRPSRVSIWEIEPV 371

Query: 348 TTFPMYPSLFPLRLKRPWHPSTSSFNDNRDETASGLN----WLRGGTGEQGLTTLNFQSL 403
            T P Y  + P    RP +P      D+  +  +       W+    G +   +  F  L
Sbjct: 372 IT-PFY--ICPPPFFRPKYPRQPGMPDDELDMENAFKRAMPWMGEDFGMKDAQSSMFPGL 428

Query: 404 GMFPWM 409
            +  WM
Sbjct: 429 SLVQWM 434



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 69/134 (51%), Positives = 92/134 (68%), Gaps = 6/134 (4%)

Query: 640  GVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQI--DQLTPTRTFVKVYKSGSVGRSLDIS 697
            G+ S+P   SG  N + G + DS   + N G +  +Q    RT+ KV K GSVGRS+D++
Sbjct: 931  GIPSIPF-KSGCSNEV-GGINDSG--IMNGGGLWPNQTQRMRTYTKVQKRGSVGRSIDVT 986

Query: 698  RFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIK 757
            R+S Y+ELR +L +MFGIEG+ EDPL S W+LV+ D END+LL+GDDPWE FV+ V  IK
Sbjct: 987  RYSGYDELRHDLARMFGIEGQLEDPLTSDWKLVYTDHENDILLVGDDPWEEFVNCVQNIK 1046

Query: 758  ILSPEDVQKMGEQG 771
            ILS  +VQ+M   G
Sbjct: 1047 ILSSVEVQQMSLDG 1060


>gi|357148474|ref|XP_003574778.1| PREDICTED: auxin response factor 21-like [Brachypodium distachyon]
          Length = 1088

 Score =  499 bits (1285), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 255/361 (70%), Positives = 297/361 (82%), Gaps = 5/361 (1%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           +N ELW+ACAGPLV+LP  G+ VVYFPQGHSEQVAA+  K+ D+ IP+YPNLP +LIC L
Sbjct: 21  VNQELWYACAGPLVALPPAGSLVVYFPQGHSEQVAASMRKDADAQIPSYPNLPSKLICIL 80

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQ--KDTFVPIELGIPSKQP-TNYFCKTLTASDT 124
           HNVTM AD +TDEVYA+MTLQP+S   Q  K+  +  E+ +   +P T +FCKTLTASDT
Sbjct: 81  HNVTMEADPDTDEVYARMTLQPVSNVTQCDKEILLASEIALKQSRPQTEFFCKTLTASDT 140

Query: 125 STHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 184
           STHGGFSVPRRAAE++FP LDFSLQPPAQEL ARDLHD  W FRHIFRGQPKRHLLTTGW
Sbjct: 141 STHGGFSVPRRAAERIFPQLDFSLQPPAQELQARDLHDNTWTFRHIFRGQPKRHLLTTGW 200

Query: 185 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHA 244
           S+F+S KRL+AGDSVLFI + K+QLLLGIRRA R PT + SSVLSSDSMHIG+LAAAAHA
Sbjct: 201 SLFISGKRLLAGDSVLFIRDGKHQLLLGIRRANRQPTNLSSSVLSSDSMHIGVLAAAAHA 260

Query: 245 AATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTI 304
           AA NS FT+F+NPRASPSEFVIP  KY KAV+  ++S+GMRFRM+FETEES  RRYMGTI
Sbjct: 261 AANNSQFTIFYNPRASPSEFVIPFAKYQKAVYSNQLSLGMRFRMMFETEESGTRRYMGTI 320

Query: 305 TGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPS-LFPLRLK 362
           TGISDLDPVRW +S WRS++V WDE+   ER+ RVSLWEIEP+   F +YPS LF  +  
Sbjct: 321 TGISDLDPVRWKSSQWRSIQVAWDEAAPTERRTRVSLWEIEPVIAPFFIYPSPLFTAKRA 380

Query: 363 R 363
           R
Sbjct: 381 R 381



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 78/212 (36%), Positives = 112/212 (52%), Gaps = 35/212 (16%)

Query: 590  PSSYNG----KDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSF-TTSVDPGVSSM 644
            PSS N     +D     E   TD +N+++FGV+ID   L LP    +   TS++      
Sbjct: 853  PSSLNQHQLLRDTVPDNEFEVTDPRNNLLFGVNIDGQ-LGLPLNADALLATSIENDKFMD 911

Query: 645  PLGDSGFHNSMYGCMQ----DSSELLHNVGQIDQL----------TP------------- 677
             +  +G  N M          SS + H+ G  D            TP             
Sbjct: 912  QMAGNGISNYMSSKESQQEISSSMISHSFGVADMAFNSIDSAINDTPFLNRNSRAPAPAH 971

Query: 678  --TRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRE 735
               RT+ KV+K G+VGRS+DI+R+S Y+EL+ ++ +MFGIEG+  D  R GW+LV+ D E
Sbjct: 972  QRMRTYTKVHKRGAVGRSIDINRYSGYDELKHDIARMFGIEGQLGDQSRVGWKLVYEDHE 1031

Query: 736  NDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
             DVLL+GDDPWE F++ V  I+ILSP++  +M
Sbjct: 1032 KDVLLVGDDPWEDFLNCVRCIRILSPQEEMQM 1063


>gi|326497439|dbj|BAK05809.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1083

 Score =  499 bits (1285), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 293/545 (53%), Positives = 356/545 (65%), Gaps = 62/545 (11%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           +N ELW+ACAGPLV+LP  G+ VVYFPQGHSEQVAA+  K+ D+ IP+YPNLP +LIC L
Sbjct: 20  VNQELWYACAGPLVALPPPGSLVVYFPQGHSEQVAASMRKDADAQIPSYPNLPSKLICIL 79

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQ--KDTFVPIELGIPSKQP-TNYFCKTLTASDT 124
           H+VTM +D ETDEVYA+MTLQP+S   Q  K+  +  EL +   +P T +FCKTLTASDT
Sbjct: 80  HSVTMQSDPETDEVYARMTLQPVSNVTQCDKEILLASELALKQNKPQTEFFCKTLTASDT 139

Query: 125 STHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 184
           STHGGFSVPRRAAE++FP LDFSLQPPAQEL ARDLHD  W FRHIFRGQPKRHLLTTGW
Sbjct: 140 STHGGFSVPRRAAERIFPRLDFSLQPPAQELQARDLHDTIWTFRHIFRGQPKRHLLTTGW 199

Query: 185 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHA 244
           S+F+S KRL+AGDSVLFI + K QLLLGIRRA R PT + SSVLSSDSMHIG+LAAAAHA
Sbjct: 200 SLFISGKRLIAGDSVLFIRDAKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGVLAAAAHA 259

Query: 245 AATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTI 304
           AA NS FT+F+NPRASPSEFVIP  KY KAV+  ++S+GMRFRM+FETEES  RRYMGTI
Sbjct: 260 AANNSQFTIFYNPRASPSEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEESGTRRYMGTI 319

Query: 305 TGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSLFPL-RLK 362
           TGISDLDPVRW NS WR+++V WDE+   ER+ RVSLW+IEP+   F +YP+  PL   K
Sbjct: 320 TGISDLDPVRWKNSQWRNIQVAWDEAAPSERRTRVSLWDIEPVIAPFFIYPT--PLFTAK 377

Query: 363 RPWHPSTSSFNDNRDETASGLN--------WLRGGTGEQGLTTLNFQSLGM-----FPWM 409
           R   P         D+  SG++        WL     ++ + T N    G+       WM
Sbjct: 378 RARQPGMI------DDDTSGMDNLFKRTMPWLGEEICKKDMNTQNSIVPGLNLAQSVQWM 431

Query: 410 QQR---------VEPSFLGNDHNQQYQAMLAAGMQSGDPVRQQFMQLQQPFQYLQQSGSQ 460
             +         ++P  L +   +  Q + AA +      + QF+Q             Q
Sbjct: 432 NMQQNLSLAGTVMQPELLNSLAGKHVQNLSAADISRQISFQPQFLQ-------------Q 478

Query: 461 NPLQLKQQQHLLQQLNSQAEDRAQQQQQPQ------------QHMYHDALQIRTDELLQR 508
           N +Q      LL Q N QAE  A+    P             Q  Y D  Q    + +Q 
Sbjct: 479 NNIQFDTS--LLPQQNQQAEQLAKAIATPNQLENIMAPQKVDQDCYSDQKQRAVTQTVQG 536

Query: 509 QQSNL 513
            Q+NL
Sbjct: 537 SQANL 541



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 73/204 (35%), Positives = 111/204 (54%), Gaps = 35/204 (17%)

Query: 596  KDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSF-TTSVDPGVSSMPLGDSGFHNS 654
            +D A  +E   +D  N+++FGV+ID   L LP    +    S++       +  +G  N 
Sbjct: 858  RDTAPDSEFEISDPTNNLLFGVNIDGQ-LGLPLNADALLANSIENDKFMDEMAGNGISN- 915

Query: 655  MYGCMQDSSELL------HNVG-------QIDQLTP------------------TRTFVK 683
             Y   +DS + L      H++G        ID  T                    RT+ K
Sbjct: 916  -YISSKDSQQELSSSMISHSLGVADMGFNSIDSATNDPPFLNRNSRAPAPAHQRMRTYTK 974

Query: 684  VYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGD 743
            V+K G+VGRS+D++R+S Y+EL+ ++ +MFGIEG+  D  R GW+LV+ D E DVLL+GD
Sbjct: 975  VHKRGAVGRSIDMNRYSGYDELKHDIARMFGIEGQLGDQSRVGWKLVYEDHEKDVLLVGD 1034

Query: 744  DPWEAFVSNVWYIKILSPEDVQKM 767
            DPWE F++ V  I+ILSP++  +M
Sbjct: 1035 DPWEDFLNCVRCIRILSPQEEMQM 1058


>gi|242063990|ref|XP_002453284.1| hypothetical protein SORBIDRAFT_04g003240 [Sorghum bicolor]
 gi|241933115|gb|EES06260.1| hypothetical protein SORBIDRAFT_04g003240 [Sorghum bicolor]
          Length = 1143

 Score =  499 bits (1284), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 281/498 (56%), Positives = 346/498 (69%), Gaps = 26/498 (5%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
            +N++LW+ACAGPLVSLP VG+ VVYFPQGHSEQVAA+  K++D+H+P+YPNLP +LIC 
Sbjct: 36  AINADLWYACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKDIDAHVPSYPNLPSKLICL 95

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQP-TNYFCKTLTASDTS 125
           LH+VT+HAD +TDEVYAQMTLQP++    K+     EL +   +P   +FCKTLTASDTS
Sbjct: 96  LHSVTLHADPDTDEVYAQMTLQPVN-TYGKEALQLSELALKHARPQMEFFCKTLTASDTS 154

Query: 126 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 185
           THGGFSVPRRAAEK+ P LDFS+QPPAQEL ARD+HD  W FRHIFRGQPKRHLLTTGWS
Sbjct: 155 THGGFSVPRRAAEKILPPLDFSMQPPAQELQARDIHDNVWTFRHIFRGQPKRHLLTTGWS 214

Query: 186 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 245
           +FV  KRL AGDSV+F+ +E+ QLLLGIRRA R PT + SSVLSSDSMHIG+LAAAAHAA
Sbjct: 215 LFVGGKRLFAGDSVIFVRDERQQLLLGIRRASRQPTNISSSVLSSDSMHIGVLAAAAHAA 274

Query: 246 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 305
           A NS FT+F+NPRASP+EFVIP  KY KA++  ++S+GMRFRM+FETEE  +RRYMGTIT
Sbjct: 275 ANNSPFTIFYNPRASPTEFVIPFAKYQKALYSNQISLGMRFRMMFETEELGMRRYMGTIT 334

Query: 306 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSLFPLRLKRP 364
           GISDLDPVRW NS WR+++VGWDES AGER+ RVS+WEIEP+   F + P  F   +KRP
Sbjct: 335 GISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSMWEIEPIAAPFFICPQPF-FGVKRP 393

Query: 365 WHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLN--FQSLGMFPWMQQRVEPSFLGNDH 422
                 S ++  +     + WL      +   T N     L +  WM          N +
Sbjct: 394 RQIDDES-SEMENLFKRAMPWLGEEICIKDAQTQNTTMPGLSLVQWM----------NMN 442

Query: 423 NQQYQAMLAAGMQSGDPVRQQFMQLQQPFQYLQQSGSQN-PLQLKQQQHLLQQLNSQAE- 480
            QQ   +   G+QS     +    L  P   +Q  G+     QL  Q HLLQQ + Q   
Sbjct: 443 RQQSSTLANTGIQS-----EYLRSLSNP--AMQNLGAAELARQLYVQNHLLQQNSVQLNA 495

Query: 481 DRAQQQQQPQQHMYHDAL 498
            +  QQ QP   +   +L
Sbjct: 496 SKLPQQMQPINELAKGSL 513



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 58/93 (62%), Positives = 72/93 (77%)

Query: 679  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 738
            RTF KVYK G+VGRS+DI RFS Y EL+  L +MFGIEG+ ED  R GW+LV+ D E+D+
Sbjct: 1010 RTFTKVYKRGAVGRSIDIGRFSGYEELKHALARMFGIEGQLEDRQRIGWKLVYKDHEDDI 1069

Query: 739  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 771
            LLLGDDPWE FV+ V  I+ILSP++VQ+M   G
Sbjct: 1070 LLLGDDPWEEFVNCVKCIRILSPQEVQQMSLDG 1102


>gi|158563961|sp|Q6Z2W3.2|ARFE_ORYSJ RecName: Full=Auxin response factor 5
          Length = 1142

 Score =  498 bits (1282), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 283/484 (58%), Positives = 344/484 (71%), Gaps = 19/484 (3%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
            +NSELWHACAGPLVSLP VG+ VVYFPQGHSEQVAA+  K+VD+H+P+YPNLP +LIC 
Sbjct: 40  AINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKDVDAHVPSYPNLPSKLICL 99

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQP-TNYFCKTLTASDTS 125
           LH V +HAD +TDEVYAQMTLQP++    K+     EL +   +P   +FCKTLTASDTS
Sbjct: 100 LHGVNLHADPDTDEVYAQMTLQPVN-TYGKEALQISELALKQARPQMEFFCKTLTASDTS 158

Query: 126 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 185
           THGGFSVPRRAAEK+FP LDFS+QPPAQEL ARD+HD  W FRHI+RGQPKRHLLTTGWS
Sbjct: 159 THGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDIHDNVWTFRHIYRGQPKRHLLTTGWS 218

Query: 186 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 245
           +FVS KRL AGDSV+ + +EK+QLLLGIRRA R PT + SSVLSSDSMHIG+LAAAAHAA
Sbjct: 219 LFVSGKRLFAGDSVIVVRDEKHQLLLGIRRANRQPTNISSSVLSSDSMHIGVLAAAAHAA 278

Query: 246 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 305
           A +S FT+F+NPRASP+EFVIP  KY KA++  ++S+GMRFRM+FETEE   RRYMGTIT
Sbjct: 279 ANSSPFTIFYNPRASPTEFVIPFAKYQKALYSNQISLGMRFRMMFETEELGTRRYMGTIT 338

Query: 306 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSLFPLRLKRP 364
           GISDLDPVRW NS WR+++VGWDES AGER+ RVS+WEIEP+   F + P  F   +KRP
Sbjct: 339 GISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAAPFFLCPQPF-FGVKRP 397

Query: 365 WHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQS--LGMFPWMQ-QRVEPSFLGND 421
                 S  +N  + A  + WL      +     N  +  L +  WM   R + S L N 
Sbjct: 398 RQLDDESEMENLFKRA--MPWLGEEVCIKDTQNQNSTAPGLSLVQWMNMNRQQSSSLANT 455

Query: 422 HNQQ--YQAMLAAGMQ---SGDPVRQQFMQLQQPFQYLQQSGSQ-NPLQLKQQQHLLQQL 475
             Q    QA+    MQ   + +  RQ ++Q       LQQ+  Q N  +L QQ   +  L
Sbjct: 456 AAQSEYLQALGNPAMQNLAADELARQLYVQ----NNLLQQNCIQFNSPKLPQQMQTMNDL 511

Query: 476 NSQA 479
           +  A
Sbjct: 512 SKAA 515



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 57/93 (61%), Positives = 72/93 (77%)

Query: 679  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 738
            RTF KVYK G+VGRS+DI R+S Y EL+  L +MFGIEG+ ED  R GW+LV+ D E+D+
Sbjct: 1009 RTFTKVYKRGAVGRSIDIGRYSGYEELKHALARMFGIEGQLEDRQRIGWKLVYKDHEDDI 1068

Query: 739  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 771
            LLLGDDPWE FV+ V  I+ILSP++VQ+M   G
Sbjct: 1069 LLLGDDPWEEFVNCVRCIRILSPQEVQQMSLDG 1101


>gi|356552071|ref|XP_003544394.1| PREDICTED: auxin response factor 5-like [Glycine max]
          Length = 929

 Score =  498 bits (1282), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 248/363 (68%), Positives = 293/363 (80%), Gaps = 4/363 (1%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G  K LNSELWHACAGPLVSLP VG+ V YFPQGHSEQVAA+T +   S IPNYPNLP Q
Sbjct: 36  GVRKTLNSELWHACAGPLVSLPQVGSLVFYFPQGHSEQVAASTRRTATSQIPNYPNLPYQ 95

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP-SKQPTNYFCKTLTA 121
           L+CQ+ NVT+HAD ETDE+YAQMTLQPL+ E  ++ F   + G   SK P+ +FCKTLTA
Sbjct: 96  LLCQVQNVTLHADKETDEIYAQMTLQPLNSE--REVFPISDFGHKHSKHPSEFFCKTLTA 153

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAEK+FP LD+++QPP QEL+ RDLHD  W FRHI+RGQPKRHLLT
Sbjct: 154 SDTSTHGGFSVPRRAAEKLFPPLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLT 213

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWS+FV +KRL AGDSVLFI +E++QL +G+RR  R  T +PSSVLS+DSMHIG+LAAA
Sbjct: 214 TGWSLFVGSKRLRAGDSVLFIRDERSQLRVGVRRVNRQQTTLPSSVLSADSMHIGVLAAA 273

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           AHAAA  S FT+F+NPRA PSEFVIPL KY K+VF T+VSVGMRF M+FETEES  RRYM
Sbjct: 274 AHAAANRSPFTIFYNPRACPSEFVIPLAKYRKSVFGTQVSVGMRFGMMFETEESGKRRYM 333

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRL 361
           GTI GISD+DP+RW  S WR+++V WDE   G++Q RVS+WEIE   +  ++PSL    L
Sbjct: 334 GTIVGISDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWEIETPESLFIFPSLTS-GL 392

Query: 362 KRP 364
           KRP
Sbjct: 393 KRP 395



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 59/124 (47%), Positives = 80/124 (64%)

Query: 661 DSSELLHNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFE 720
           D S  L N        P RT+ KV K+GSVGRS+D++ F +Y EL   +  MFG++G   
Sbjct: 805 DESSFLQNNSWQQVPAPIRTYTKVQKAGSVGRSIDVTTFKNYEELIRAIECMFGLDGLLN 864

Query: 721 DPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSG 780
           D   SGW+LV+VD E+DVLL+GDDPWE FV  V  I+ILSP +VQ+M E+G++  +  + 
Sbjct: 865 DTKCSGWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMSEEGMKLLNSGAL 924

Query: 781 QRAN 784
           Q  N
Sbjct: 925 QGMN 928


>gi|42409013|dbj|BAD10267.1| putative auxin response factor 7a [Oryza sativa Japonica Group]
          Length = 1139

 Score =  498 bits (1281), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 283/484 (58%), Positives = 344/484 (71%), Gaps = 19/484 (3%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
            +NSELWHACAGPLVSLP VG+ VVYFPQGHSEQVAA+  K+VD+H+P+YPNLP +LIC 
Sbjct: 37  AINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKDVDAHVPSYPNLPSKLICL 96

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQP-TNYFCKTLTASDTS 125
           LH V +HAD +TDEVYAQMTLQP++    K+     EL +   +P   +FCKTLTASDTS
Sbjct: 97  LHGVNLHADPDTDEVYAQMTLQPVN-TYGKEALQISELALKQARPQMEFFCKTLTASDTS 155

Query: 126 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 185
           THGGFSVPRRAAEK+FP LDFS+QPPAQEL ARD+HD  W FRHI+RGQPKRHLLTTGWS
Sbjct: 156 THGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDIHDNVWTFRHIYRGQPKRHLLTTGWS 215

Query: 186 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 245
           +FVS KRL AGDSV+ + +EK+QLLLGIRRA R PT + SSVLSSDSMHIG+LAAAAHAA
Sbjct: 216 LFVSGKRLFAGDSVIVVRDEKHQLLLGIRRANRQPTNISSSVLSSDSMHIGVLAAAAHAA 275

Query: 246 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 305
           A +S FT+F+NPRASP+EFVIP  KY KA++  ++S+GMRFRM+FETEE   RRYMGTIT
Sbjct: 276 ANSSPFTIFYNPRASPTEFVIPFAKYQKALYSNQISLGMRFRMMFETEELGTRRYMGTIT 335

Query: 306 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSLFPLRLKRP 364
           GISDLDPVRW NS WR+++VGWDES AGER+ RVS+WEIEP+   F + P  F   +KRP
Sbjct: 336 GISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAAPFFLCPQPF-FGVKRP 394

Query: 365 WHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQS--LGMFPWMQ-QRVEPSFLGND 421
                 S  +N  + A  + WL      +     N  +  L +  WM   R + S L N 
Sbjct: 395 RQLDDESEMENLFKRA--MPWLGEEVCIKDTQNQNSTAPGLSLVQWMNMNRQQSSSLANT 452

Query: 422 HNQQ--YQAMLAAGMQ---SGDPVRQQFMQLQQPFQYLQQSGSQ-NPLQLKQQQHLLQQL 475
             Q    QA+    MQ   + +  RQ ++Q       LQQ+  Q N  +L QQ   +  L
Sbjct: 453 AAQSEYLQALGNPAMQNLAADELARQLYVQ----NNLLQQNCIQFNSPKLPQQMQTMNDL 508

Query: 476 NSQA 479
           +  A
Sbjct: 509 SKAA 512



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 57/93 (61%), Positives = 72/93 (77%)

Query: 679  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 738
            RTF KVYK G+VGRS+DI R+S Y EL+  L +MFGIEG+ ED  R GW+LV+ D E+D+
Sbjct: 1006 RTFTKVYKRGAVGRSIDIGRYSGYEELKHALARMFGIEGQLEDRQRIGWKLVYKDHEDDI 1065

Query: 739  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 771
            LLLGDDPWE FV+ V  I+ILSP++VQ+M   G
Sbjct: 1066 LLLGDDPWEEFVNCVRCIRILSPQEVQQMSLDG 1098


>gi|242082191|ref|XP_002445864.1| hypothetical protein SORBIDRAFT_07g027080 [Sorghum bicolor]
 gi|241942214|gb|EES15359.1| hypothetical protein SORBIDRAFT_07g027080 [Sorghum bicolor]
          Length = 1095

 Score =  497 bits (1280), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 267/456 (58%), Positives = 330/456 (72%), Gaps = 18/456 (3%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           +N ELW+ACAGPLV+LP  G+ VVYFPQGHSEQVAA+  K+ D+ IP+YPNLP +LIC L
Sbjct: 24  VNQELWYACAGPLVTLPPAGSLVVYFPQGHSEQVAASMRKDADAKIPSYPNLPSKLICIL 83

Query: 68  HNVTMHADVETDEVYAQMTLQPLS--PEEQKDTFVPIELGIPSKQP-TNYFCKTLTASDT 124
            +VTM AD +TDEVYA+MTLQP+S      K+T +  +L +   +P T +FCKTLTASDT
Sbjct: 84  RSVTMLADPDTDEVYARMTLQPVSNVTHCDKETLLASDLALKQTRPQTEFFCKTLTASDT 143

Query: 125 STHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 184
           STHGGFSVPRRAAE++FP LDFS+QPPAQEL ARDLHD  W FRHI+RGQPKRHLLTTGW
Sbjct: 144 STHGGFSVPRRAAERIFPHLDFSMQPPAQELQARDLHDAIWTFRHIYRGQPKRHLLTTGW 203

Query: 185 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHA 244
           S+FVS KRL+AGDSVLFI + + QLLLGIRRA R P  + SSVLSSDSMHIG+LAAAAHA
Sbjct: 204 SLFVSGKRLLAGDSVLFIRDGRQQLLLGIRRANRQPVNLSSSVLSSDSMHIGILAAAAHA 263

Query: 245 AATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTI 304
           AA NS FTVF+NPRASPSEFVIP  KY KAV+  ++S+GMRFRM+FETEES+ RRYMGTI
Sbjct: 264 AANNSQFTVFYNPRASPSEFVIPFAKYQKAVYSNQLSLGMRFRMMFETEESATRRYMGTI 323

Query: 305 TGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSLFPLRLKR 363
           TGISD+DPVRW NS WR+++V WDE+   ER+ RVSLWE+EP+   F +YPS      KR
Sbjct: 324 TGISDMDPVRWKNSQWRNIQVAWDEAAPTERRTRVSLWEVEPVIAPFFIYPSPL-FTAKR 382

Query: 364 PWHPSTSSFNDNRDET--ASGLNWLRGGTGEQGLTTLN--FQSLGMFPWMQQR------- 412
           P  P  +  + +  +T     + W     G++ L+T N     L +  WM  +       
Sbjct: 383 PRQPGITDDDSSEMDTLFKRTMPWFGEEIGKKDLSTQNSLVPGLSLVQWMNMQQTSSLTS 442

Query: 413 --VEPSFLGNDHNQQYQAMLAAGMQSGDPVRQQFMQ 446
             ++P  L +   +  Q + AA +      + QF+Q
Sbjct: 443 TVMQPELLNSLAGKPVQTLAAADLSRQISFQPQFLQ 478



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 49/89 (55%), Positives = 70/89 (78%)

Query: 679  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 738
            RT+ KV+K G+VGRS+DI+R+S Y+EL+ ++ +MFGIEG+  D  R  W+LV+ D E DV
Sbjct: 977  RTYTKVHKRGAVGRSIDINRYSGYDELKHDIARMFGIEGQLSDQNRVCWKLVYEDHEKDV 1036

Query: 739  LLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
            LL+GDDPWE FV+ V  I+ILSP++ ++M
Sbjct: 1037 LLVGDDPWEDFVNCVRCIRILSPQEERQM 1065


>gi|158563960|sp|Q6YZW0.2|ARFU_ORYSJ RecName: Full=Auxin response factor 21; AltName: Full=OsARF7b
          Length = 1116

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 276/459 (60%), Positives = 329/459 (71%), Gaps = 25/459 (5%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           +N ELW+ACAGPLVSLP  G+ +VYFPQGHSEQVAA+  K+ D+ IP+YPNLP +LIC L
Sbjct: 22  VNQELWYACAGPLVSLPPQGSLIVYFPQGHSEQVAASMRKDADAQIPSYPNLPSKLICIL 81

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQ--KDTFVPIELGIPSKQP-TNYFCKTLTASDT 124
           H+VTM AD +TDEVYA+MTLQP+S   Q  K+T +  EL +   +P T +FCKTLTASDT
Sbjct: 82  HSVTMLADPDTDEVYARMTLQPVSNVTQCDKETLLASELALKQTRPQTEFFCKTLTASDT 141

Query: 125 STHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 184
           STHGGFSVPRRAAE++FP LDFS+QPPAQEL ARDLHD  W FRHI+RGQPKRHLLTTGW
Sbjct: 142 STHGGFSVPRRAAERIFPRLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGW 201

Query: 185 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHA 244
           S+FVS KRL+AGDSVLFI + K QLLLGIRRA R PT + SSVLSSDSMHIG+LAAAAHA
Sbjct: 202 SLFVSGKRLLAGDSVLFIRDAKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHA 261

Query: 245 AATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTI 304
           AA NS FT+++NPRAS SEFVIP  KY KAV+  ++S+GMRFRM+FETEES  RRYMGTI
Sbjct: 262 AANNSQFTIYYNPRASTSEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEESGTRRYMGTI 321

Query: 305 TGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPS-LFPLRLK 362
           TGISDLDPVRW  SHWR+++V WDE+   ER+ RVSLWEIEP+   F +YPS LF    K
Sbjct: 322 TGISDLDPVRWKTSHWRNIQVAWDEAAPTERRTRVSLWEIEPIIAPFFIYPSPLF--TAK 379

Query: 363 RPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTT-LNFQS-----LGMFPWMQQR---- 412
           RP  P      D+  E    L       GE+     LN Q+     L +  WM  +    
Sbjct: 380 RPRLP---GMTDDETEMDGLLKRAMPWVGEEICKKDLNIQNSVVPGLNLAQWMNMQHSSS 436

Query: 413 -----VEPSFLGNDHNQQYQAMLAAGMQSGDPVRQQFMQ 446
                V+P  L +   +  Q + AA +        QF+Q
Sbjct: 437 LPGTVVQPELLNSLSGKPVQNLAAADLSRQISFHPQFLQ 475



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 87/238 (36%), Positives = 129/238 (54%), Gaps = 37/238 (15%)

Query: 590  PSSYNG----KDAAVGTENCNTDSQNSVVFGVHIDSS-GLLLPTTVSSFTTSVDPGVSSM 644
            PSS++     KD    +E   TD +N+++FGV+ID   GL L   + +     D  +  +
Sbjct: 876  PSSFHQHHLLKDTVPDSEFEVTDPRNNLLFGVNIDGQLGLPLNADLLANDIGTDKYMDQL 935

Query: 645  P-LGDSGFHNSMYGCMQDSSELL-HNVGQIDQL----------TP--------------- 677
            P  G S F +S     + SS ++ H+ G  D            TP               
Sbjct: 936  PGNGISNFISSKDSQQELSSSMISHSFGVADMAFNSIDSAINDTPFLNRNSRSAAGPAHQ 995

Query: 678  -TRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
              RT+ KV+K G+VGRS+DI+R+S Y+EL+ ++ +MFGIEG+  D  R GW+LV+ D E 
Sbjct: 996  RMRTYTKVHKRGAVGRSIDINRYSGYDELKHDVARMFGIEGQLGDQNRVGWKLVYEDHEK 1055

Query: 737  DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM---GEQGVESFSPSSGQRANSRGNCGR 791
            DVLL+GDDPWE FV  V  I+ILSP++  +M   G+ G +SF P+    ++  G+  R
Sbjct: 1056 DVLLVGDDPWEDFVKCVRCIRILSPQEEMQMRLVGDFG-DSFLPNQACSSSDGGHPWR 1112


>gi|115477344|ref|NP_001062268.1| Os08g0520500 [Oryza sativa Japonica Group]
 gi|19352047|dbj|BAB85917.1| auxin response factor 7b [Oryza sativa]
 gi|113624237|dbj|BAF24182.1| Os08g0520500, partial [Oryza sativa Japonica Group]
          Length = 1096

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 275/457 (60%), Positives = 330/457 (72%), Gaps = 24/457 (5%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           +N ELW+ACAGPLVSLP  G+ +VYFPQGHSEQVAA+  K+ D+ IP+YPNLP +LIC L
Sbjct: 5   VNQELWYACAGPLVSLPPQGSLIVYFPQGHSEQVAASMRKDADAQIPSYPNLPSKLICIL 64

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQP-TNYFCKTLTASDTST 126
           H+VTM AD +TDEVYA+MTLQP+S  + K+T +  EL +   +P T +FCKTLTASDTST
Sbjct: 65  HSVTMLADPDTDEVYARMTLQPVSNCD-KETLLASELALKQTRPQTEFFCKTLTASDTST 123

Query: 127 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 186
           HGGFSVPRRAAE++FP LDFS+QPPAQEL ARDLHD  W FRHI+RGQPKRHLLTTGWS+
Sbjct: 124 HGGFSVPRRAAERIFPRLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWSL 183

Query: 187 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 246
           FVS KRL+AGDSVLFI + K QLLLGIRRA R PT + SSVLSSDSMHIG+LAAAAHAAA
Sbjct: 184 FVSGKRLLAGDSVLFIRDAKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAA 243

Query: 247 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 306
            NS FT+++NPRAS SEFVIP  KY KAV+  ++S+GMRFRM+FETEES  RRYMGTITG
Sbjct: 244 NNSQFTIYYNPRASTSEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEESGTRRYMGTITG 303

Query: 307 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPS-LFPLRLKRP 364
           ISDLDPVRW  SHWR+++V WDE+   ER+ RVSLWEIEP+   F +YPS LF    KRP
Sbjct: 304 ISDLDPVRWKTSHWRNIQVAWDEAAPTERRTRVSLWEIEPIIAPFFIYPSPLF--TAKRP 361

Query: 365 WHPSTSSFNDNRDETASGLNWLRGGTGEQGLTT-LNFQS-----LGMFPWMQQR------ 412
             P  +   D+  E    L       GE+     LN Q+     L +  WM  +      
Sbjct: 362 RLPGMT---DDETEMDGLLKRAMPWVGEEICKKDLNIQNSVVPGLNLAQWMNMQHSSSLP 418

Query: 413 ---VEPSFLGNDHNQQYQAMLAAGMQSGDPVRQQFMQ 446
              V+P  L +   +  Q + AA +        QF+Q
Sbjct: 419 GTVVQPELLNSLSGKPVQNLAAADLSRQISFHPQFLQ 455



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 87/238 (36%), Positives = 129/238 (54%), Gaps = 37/238 (15%)

Query: 590  PSSYNG----KDAAVGTENCNTDSQNSVVFGVHIDSS-GLLLPTTVSSFTTSVDPGVSSM 644
            PSS++     KD    +E   TD +N+++FGV+ID   GL L   + +     D  +  +
Sbjct: 856  PSSFHQHHLLKDTVPDSEFEVTDPRNNLLFGVNIDGQLGLPLNADLLANDIGTDKYMDQL 915

Query: 645  P-LGDSGFHNSMYGCMQDSSELL-HNVGQIDQL----------TP--------------- 677
            P  G S F +S     + SS ++ H+ G  D            TP               
Sbjct: 916  PGNGISNFISSKDSQQELSSSMISHSFGVADMAFNSIDSAINDTPFLNRNSRSAAGPAHQ 975

Query: 678  -TRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
              RT+ KV+K G+VGRS+DI+R+S Y+EL+ ++ +MFGIEG+  D  R GW+LV+ D E 
Sbjct: 976  RMRTYTKVHKRGAVGRSIDINRYSGYDELKHDVARMFGIEGQLGDQNRVGWKLVYEDHEK 1035

Query: 737  DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM---GEQGVESFSPSSGQRANSRGNCGR 791
            DVLL+GDDPWE FV  V  I+ILSP++  +M   G+ G +SF P+    ++  G+  R
Sbjct: 1036 DVLLVGDDPWEDFVKCVRCIRILSPQEEMQMRLVGDFG-DSFLPNQACSSSDGGHPWR 1092


>gi|42408525|dbj|BAD09704.1| auxin response factor 7b [Oryza sativa Japonica Group]
 gi|42409173|dbj|BAD10439.1| auxin response factor 7b [Oryza sativa Japonica Group]
          Length = 1113

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 274/457 (59%), Positives = 329/457 (71%), Gaps = 24/457 (5%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           +N ELW+ACAGPLVSLP  G+ +VYFPQGHSEQVAA+  K+ D+ IP+YPNLP +LIC L
Sbjct: 22  VNQELWYACAGPLVSLPPQGSLIVYFPQGHSEQVAASMRKDADAQIPSYPNLPSKLICIL 81

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQP-TNYFCKTLTASDTST 126
           H+VTM AD +TDEVYA+MTLQP++ +  K+T +  EL +   +P T +FCKTLTASDTST
Sbjct: 82  HSVTMLADPDTDEVYARMTLQPVT-QCDKETLLASELALKQTRPQTEFFCKTLTASDTST 140

Query: 127 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 186
           HGGFSVPRRAAE++FP LDFS+QPPAQEL ARDLHD  W FRHI+RGQPKRHLLTTGWS+
Sbjct: 141 HGGFSVPRRAAERIFPRLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWSL 200

Query: 187 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 246
           FVS KRL+AGDSVLFI + K QLLLGIRRA R PT + SSVLSSDSMHIG+LAAAAHAAA
Sbjct: 201 FVSGKRLLAGDSVLFIRDAKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAA 260

Query: 247 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 306
            NS FT+++NPRAS SEFVIP  KY KAV+  ++S+GMRFRM+FETEES  RRYMGTITG
Sbjct: 261 NNSQFTIYYNPRASTSEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEESGTRRYMGTITG 320

Query: 307 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPS-LFPLRLKRP 364
           ISDLDPVRW  SHWR+++V WDE+   ER+ RVSLWEIEP+   F +YPS LF    KRP
Sbjct: 321 ISDLDPVRWKTSHWRNIQVAWDEAAPTERRTRVSLWEIEPIIAPFFIYPSPLF--TAKRP 378

Query: 365 WHPSTSSFNDNRDETASGLNWLRGGTGEQGLTT-LNFQS-----LGMFPWMQQR------ 412
             P      D+  E    L       GE+     LN Q+     L +  WM  +      
Sbjct: 379 RLP---GMTDDETEMDGLLKRAMPWVGEEICKKDLNIQNSVVPGLNLAQWMNMQHSSSLP 435

Query: 413 ---VEPSFLGNDHNQQYQAMLAAGMQSGDPVRQQFMQ 446
              V+P  L +   +  Q + AA +        QF+Q
Sbjct: 436 GTVVQPELLNSLSGKPVQNLAAADLSRQISFHPQFLQ 472



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 87/238 (36%), Positives = 129/238 (54%), Gaps = 37/238 (15%)

Query: 590  PSSYNG----KDAAVGTENCNTDSQNSVVFGVHIDSS-GLLLPTTVSSFTTSVDPGVSSM 644
            PSS++     KD    +E   TD +N+++FGV+ID   GL L   + +     D  +  +
Sbjct: 873  PSSFHQHHLLKDTVPDSEFEVTDPRNNLLFGVNIDGQLGLPLNADLLANDIGTDKYMDQL 932

Query: 645  P-LGDSGFHNSMYGCMQDSSELL-HNVGQIDQL----------TP--------------- 677
            P  G S F +S     + SS ++ H+ G  D            TP               
Sbjct: 933  PGNGISNFISSKDSQQELSSSMISHSFGVADMAFNSIDSAINDTPFLNRNSRSAAGPAHQ 992

Query: 678  -TRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
              RT+ KV+K G+VGRS+DI+R+S Y+EL+ ++ +MFGIEG+  D  R GW+LV+ D E 
Sbjct: 993  RMRTYTKVHKRGAVGRSIDINRYSGYDELKHDVARMFGIEGQLGDQNRVGWKLVYEDHEK 1052

Query: 737  DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM---GEQGVESFSPSSGQRANSRGNCGR 791
            DVLL+GDDPWE FV  V  I+ILSP++  +M   G+ G +SF P+    ++  G+  R
Sbjct: 1053 DVLLVGDDPWEDFVKCVRCIRILSPQEEMQMRLVGDFG-DSFLPNQACSSSDGGHPWR 1109


>gi|300373052|gb|ADG43135.1| auxin response factor 1 [Zea mays]
          Length = 1085

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 266/455 (58%), Positives = 327/455 (71%), Gaps = 17/455 (3%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           +N ELW+ACAGPLV+LP  G+ VVYFPQGHSEQVAA+  K+ D+ IP+YPNL  +LIC L
Sbjct: 21  VNEELWYACAGPLVALPPAGSLVVYFPQGHSEQVAASMRKDADAKIPSYPNLSSKLICIL 80

Query: 68  HNVTMHADVETDEVYAQMTLQPLS--PEEQKDTFVPIELGIPSKQP-TNYFCKTLTASDT 124
            +VTM AD +TDEVYA+MTLQP+S      K+T +  EL +   +P T +FCKTLTASDT
Sbjct: 81  RSVTMLADPDTDEVYARMTLQPVSNVTHCDKETLLATELALKQTRPQTEFFCKTLTASDT 140

Query: 125 STHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 184
           STHGGFSVPRRAAE++FP LDFS+QPPAQEL ARDLHD  W FRHI+RGQPKRHLLTTGW
Sbjct: 141 STHGGFSVPRRAAERIFPHLDFSVQPPAQELQARDLHDAIWTFRHIYRGQPKRHLLTTGW 200

Query: 185 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHA 244
           S+FVS KRL+AGDSVLFI + + QLLLGIRRA R P  + SSVLSSDSMHIG+LAAAAHA
Sbjct: 201 SLFVSGKRLLAGDSVLFIRDGRQQLLLGIRRANRQPVNLSSSVLSSDSMHIGILAAAAHA 260

Query: 245 AATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTI 304
           AA NS FTVF+NPRASPSEFVIP  KY KAV+  ++S+GMRFRM+FETEES+ RRYMGTI
Sbjct: 261 AANNSQFTVFYNPRASPSEFVIPFAKYQKAVYSNQLSLGMRFRMMFETEESATRRYMGTI 320

Query: 305 TGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSLFPLRLKR 363
           TGISD+DP+RW NS WR+++V WDE+   ER+ RVSLWE+EP+   F +YPS      KR
Sbjct: 321 TGISDMDPLRWKNSQWRNIQVAWDEAAPSERRTRVSLWEVEPVIAPFFIYPSPL-FTAKR 379

Query: 364 PWHPSTSSFNDNRDET-ASGLNWLRGGTGEQGLTTLN--FQSLGMFPWMQQR-------- 412
           P  P  +  +   D      + W     G++ L+T N     L +  WM  +        
Sbjct: 380 PRQPGVTDDSSEMDNLFKRTMPWFGEEVGKRDLSTQNGLVPGLSLVQWMNMQHNPSLANT 439

Query: 413 -VEPSFLGNDHNQQYQAMLAAGMQSGDPVRQQFMQ 446
            ++P  L +   +  Q + AA +      + QF+Q
Sbjct: 440 VMQPELLNSLAGKPVQTLAAADLSRQISFQPQFLQ 474



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/213 (38%), Positives = 119/213 (55%), Gaps = 38/213 (17%)

Query: 590  PSSYNG----KDAAVGTENCNTDSQNSVVFGVHID------SSGLLLPTT---------- 629
            PSS+N     ++A   +E   TD+ N+ +FG +ID      +   LL T           
Sbjct: 846  PSSFNQHQPLREAVPDSEFEVTDAGNNFLFGANIDGHMEPLNEDDLLGTAFEADKYMEQM 905

Query: 630  ----VSSFTTSVDP------GVSSMPLG--DSGFHNSMYGCMQDSSELLHNV---GQIDQ 674
                +S++ +S D        + S P G  D  F NS+   + D   L  N    G + Q
Sbjct: 906  PGNGISNYISSKDSQQELSSSMISHPFGVADIAF-NSIDSSINDIQFLNRNSRAPGPVQQ 964

Query: 675  LTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDR 734
                RT+ KV+K G+VGRS+DI+R+S Y+EL+ ++ +MFGIEG+  D  R GW+LV+ D 
Sbjct: 965  RM--RTYTKVHKRGAVGRSIDINRYSGYDELKHDVARMFGIEGQLSDQNRVGWKLVYEDH 1022

Query: 735  ENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
            E DVLL+GDDPWE FV+ V  I+ILSP++ ++M
Sbjct: 1023 EKDVLLVGDDPWEDFVNCVRCIRILSPQEERQM 1055


>gi|30687949|ref|NP_851047.1| auxin response factor 7 [Arabidopsis thaliana]
 gi|46576377|sp|P93022.2|ARFG_ARATH RecName: Full=Auxin response factor 7; AltName:
           Full=Auxin-responsive protein IAA21/IAA23/IAA25;
           AltName: Full=Protein BIPOSTO; AltName: Full=Protein
           NON-PHOTOTROPIC HYPOCOTYL 4; AltName: Full=Protein
           TRANSPORT INHIBITOR RESPONSE 5
 gi|37540157|gb|AAG35177.1| ARF7 [Arabidopsis thaliana]
 gi|49616353|gb|AAT67073.1| ARF7 [Arabidopsis thaliana]
 gi|332005502|gb|AED92885.1| auxin response factor 7 [Arabidopsis thaliana]
          Length = 1164

 Score =  494 bits (1272), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 256/412 (62%), Positives = 315/412 (76%), Gaps = 11/412 (2%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ + +NSELWHACAGPL+SLP  G+ VVYFPQGHSEQVAA+  K+ D  IP+YPNLP +
Sbjct: 16  GERRNINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTD-FIPSYPNLPSK 74

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP-SKQPTNYFCKTLTA 121
           LIC LHNVT++AD ETDEVYAQMTLQP++ +  +D  +  ++G+  ++QP  +FCKTLTA
Sbjct: 75  LICMLHNVTLNADPETDEVYAQMTLQPVN-KYDRDALLASDMGLKLNRQPNEFFCKTLTA 133

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAEK+FP+LDFS+QPP QEL+A+D+HD  W FRHI+RGQPKRHLLT
Sbjct: 134 SDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLT 193

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWSVFVS KRL AGDSVLFI + K QLLLGIRRA R    + SSV+SSDSMHIG+LAAA
Sbjct: 194 TGWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGVLAAA 253

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           AHA A NS FT+F+NPRA+P+EFV+PL KY KA++  +VS+GMRFRM+FETEE  VRRYM
Sbjct: 254 AHANANNSPFTIFYNPRAAPAEFVVPLAKYTKAMY-AQVSLGMRFRMIFETEECGVRRYM 312

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRL 361
           GT+TGISDLDPVRW NS WR++++GWDES AG+R  RVS+W+IEP+ T P Y  + P   
Sbjct: 313 GTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVLT-PFY--ICPPPF 369

Query: 362 KRPWHPSTSSFNDNRDETASGLN----WLRGGTGEQGLTTLNFQSLGMFPWM 409
            RP         D+  +  S L     WL      +  ++  F  L +  WM
Sbjct: 370 FRPRFSGQPGMPDDETDMESALKRAMPWLDNSLEMKDPSSTIFPGLSLVQWM 421



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 62/112 (55%), Positives = 81/112 (72%), Gaps = 1/112 (0%)

Query: 679  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 738
            RT+ KV K GSVGRS+D++R+  Y+ELR +L +MFGIEG+ EDP  S W+LV+VD END+
Sbjct: 1037 RTYTKVQKRGSVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHENDI 1096

Query: 739  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANSRGNCG 790
            LL+GDDPWE FV+ V  IKILS  +VQ+M   G  +  P + Q A S G+ G
Sbjct: 1097 LLVGDDPWEEFVNCVQSIKILSSAEVQQMSLDGNFAGVPVTNQ-ACSGGDSG 1147


>gi|4104929|gb|AAD02218.1| auxin response factor 7 [Arabidopsis thaliana]
          Length = 1164

 Score =  494 bits (1272), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 256/412 (62%), Positives = 315/412 (76%), Gaps = 11/412 (2%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ + +NSELWHACAGPL+SLP  G+ VVYFPQGHSEQVAA+  K+ D  IP+YPNLP +
Sbjct: 16  GERRNINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTD-FIPSYPNLPSK 74

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP-SKQPTNYFCKTLTA 121
           LIC LHNVT++AD ETDEVYAQMTLQP++ +  +D  +  ++G+  ++QP  +FCKTLTA
Sbjct: 75  LICMLHNVTLNADPETDEVYAQMTLQPVN-KYDRDALLASDMGLKLNRQPNEFFCKTLTA 133

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAEK+FP+LDFS+QPP QEL+A+D+HD  W FRHI+RGQPKRHLLT
Sbjct: 134 SDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLT 193

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWSVFVS KRL AGDSVLFI + K QLLLGIRRA R    + SSV+SSDSMHIG+LAAA
Sbjct: 194 TGWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGVLAAA 253

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           AHA A NS FT+F+NPRA+P+EFV+PL KY KA++  +VS+GMRFRM+FETEE  VRRYM
Sbjct: 254 AHANANNSPFTIFYNPRAAPAEFVVPLAKYTKAMY-AQVSLGMRFRMIFETEECGVRRYM 312

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRL 361
           GT+TGISDLDPVRW NS WR++++GWDES AG+R  RVS+W+IEP+ T P Y  + P   
Sbjct: 313 GTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVLT-PFY--ICPPPF 369

Query: 362 KRPWHPSTSSFNDNRDETASGLN----WLRGGTGEQGLTTLNFQSLGMFPWM 409
            RP         D+  +  S L     WL      +  ++  F  L +  WM
Sbjct: 370 FRPRFSGQPGMPDDETDMESALKRAMPWLDNSLEMKDPSSTIFPGLSLVQWM 421



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 62/112 (55%), Positives = 81/112 (72%), Gaps = 1/112 (0%)

Query: 679  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 738
            RT+ KV K GSVGRS+D++R+  Y+ELR +L +MFGIEG+ EDP  S W+LV+VD END+
Sbjct: 1037 RTYTKVQKRGSVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHENDI 1096

Query: 739  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANSRGNCG 790
            LL+GDDPWE FV+ V  IKILS  +VQ+M   G  +  P + Q A S G+ G
Sbjct: 1097 LLVGDDPWEEFVNCVQSIKILSSAEVQQMSLDGNFAGVPVTNQ-ACSGGDSG 1147


>gi|414869517|tpg|DAA48074.1| TPA: hypothetical protein ZEAMMB73_725019 [Zea mays]
          Length = 1086

 Score =  493 bits (1270), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 267/458 (58%), Positives = 330/458 (72%), Gaps = 22/458 (4%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           +N ELW+ACAGPLV+LP  G+ VVYFPQGHSEQVAA+  K+ D+ IP+YPNL  +LIC L
Sbjct: 21  VNEELWYACAGPLVALPPAGSLVVYFPQGHSEQVAASMRKDADAKIPSYPNLSSKLICIL 80

Query: 68  HNVTMHADVETDEVYAQMTLQPLS--PEEQKDTFVPIELGIPSKQP-TNYFCKTLTASDT 124
            +VTM AD +TDEVYA+MTLQP+S      K+T +  EL +   +P T +FCKTLTASDT
Sbjct: 81  RSVTMLADPDTDEVYARMTLQPVSNVTHCDKETLLATELALKQTRPQTEFFCKTLTASDT 140

Query: 125 STHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 184
           STHGGFSVPRRAAE++FP LDFS+QPPAQEL ARDLHD  W FRHI+RGQPKRHLLTTGW
Sbjct: 141 STHGGFSVPRRAAERIFPHLDFSVQPPAQELQARDLHDAIWTFRHIYRGQPKRHLLTTGW 200

Query: 185 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHA 244
           S+FVS KRL+AGDSVLFI + + QLLLGIRRA R P  + SSVLSSDSMHIG+LAAAAHA
Sbjct: 201 SLFVSGKRLLAGDSVLFIRDGRQQLLLGIRRANRQPVNLSSSVLSSDSMHIGILAAAAHA 260

Query: 245 AATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTI 304
           AA NS FTVF+NPRASPSEFVIP  KY KAV+  ++S+GMRFRM+FETEES+ RRYMGTI
Sbjct: 261 AANNSQFTVFYNPRASPSEFVIPFAKYQKAVYSNQLSLGMRFRMMFETEESATRRYMGTI 320

Query: 305 TGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSLFPLRLKR 363
           TGISD+DP+RW NS WR+++V WDE+   ER+ RVSLWE+EP+   F +YPS      KR
Sbjct: 321 TGISDMDPLRWKNSQWRNIQVAWDEAAPSERRTRVSLWEVEPVIAPFFIYPSPL-FTAKR 379

Query: 364 PWHPSTSSFNDNRDETAS----GLNWLRGGTGEQGLTTLN--FQSLGMFPWMQQR----- 412
           P  P  +  +D+  E  +     + W     G++ L+T N     L +  WM  +     
Sbjct: 380 PRQPGVT--DDDSSEMDNLFKRTMPWFGEEVGKRDLSTQNGLVPGLSLVQWMNMQHNPSL 437

Query: 413 ----VEPSFLGNDHNQQYQAMLAAGMQSGDPVRQQFMQ 446
               ++P  L +   +  Q + AA +      + QF+Q
Sbjct: 438 ANTVMQPELLNSLAGKPVQTLAAADLSRQISFQPQFLQ 475



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 81/213 (38%), Positives = 119/213 (55%), Gaps = 38/213 (17%)

Query: 590  PSSYNG----KDAAVGTENCNTDSQNSVVFGVHID------SSGLLLPTT---------- 629
            PSS+N     ++A   +E   TD+ N+ +FG +ID      +   LL T           
Sbjct: 847  PSSFNQHQPLREAVPDSEFEVTDAGNNFLFGANIDGHMEPLNEDDLLGTAFEADKYMEQM 906

Query: 630  ----VSSFTTSVDP------GVSSMPLG--DSGFHNSMYGCMQDSSELLHNV---GQIDQ 674
                +S++ +S D        + S P G  D  F NS+   + D   L  N    G + Q
Sbjct: 907  PGNGISNYISSKDSQQELSSSMISHPFGVADIAF-NSIDSSINDIQFLNRNSRAPGPVQQ 965

Query: 675  LTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDR 734
                RT+ KV+K G+VGRS+DI+R+S Y+EL+ ++ +MFGIEG+  D  R GW+LV+ D 
Sbjct: 966  RM--RTYTKVHKRGAVGRSIDINRYSGYDELKHDVARMFGIEGQLSDQNRVGWKLVYEDH 1023

Query: 735  ENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
            E DVLL+GDDPWE FV+ V  I+ILSP++ ++M
Sbjct: 1024 EKDVLLVGDDPWEDFVNCVRCIRILSPQEERQM 1056


>gi|356520887|ref|XP_003529091.1| PREDICTED: auxin response factor 25-like [Glycine max]
          Length = 1110

 Score =  493 bits (1268), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 291/538 (54%), Positives = 365/538 (67%), Gaps = 32/538 (5%)

Query: 6   KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 65
           K +N ELW ACAGPLV+LP  GT V+YFPQGHSEQVAA+ NK+  S IPNYPNLP +L+C
Sbjct: 20  KSINPELWQACAGPLVNLPPSGTHVIYFPQGHSEQVAASLNKDPHSQIPNYPNLPSKLLC 79

Query: 66  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPT-NYFCKTLTASDT 124
            LHN+T+ AD ETDEVYAQ+TLQP+ P   KD  +  +L + S +P  ++FCK LTASDT
Sbjct: 80  LLHNLTLLADPETDEVYAQITLQPV-PSFDKDALLRSDLALKSSKPQPDFFCKQLTASDT 138

Query: 125 STHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 184
           STHGGFSVPRRAA+K+FP LD+S+QPPAQEL+ARDLHD  W FRHI+RGQPKRHLLTTGW
Sbjct: 139 STHGGFSVPRRAADKIFPPLDYSMQPPAQELVARDLHDTVWTFRHIYRGQPKRHLLTTGW 198

Query: 185 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHA 244
           S+FVS KRL+AGDSVLFI +EK  LLLGIRRA R PT + SSVLSSDSMHIG+LAAAAHA
Sbjct: 199 SLFVSGKRLLAGDSVLFIRDEKQHLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHA 258

Query: 245 AATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTI 304
           AA NS FTVF+NPR SPSEFVIPL KY K+V+  + S+GMRFRM+FETE+S  RRYMGTI
Sbjct: 259 AANNSPFTVFYNPRTSPSEFVIPLAKYYKSVYSHQPSLGMRFRMMFETEDSGTRRYMGTI 318

Query: 305 TGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRP 364
           TGISDLDPVRW NS WR+++VGWDESTAGE++ RVSLWEIEP+T           R KRP
Sbjct: 319 TGISDLDPVRWKNSQWRNLQVGWDESTAGEKRSRVSLWEIEPVTAPFFICPPPFFRSKRP 378

Query: 365 WHPST-----SSFNDNRDETASGLN---WLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPS 416
             P       S F++    T   L     ++   G  GL+   + ++   P +   ++P+
Sbjct: 379 RQPGMPDDELSDFDNIFKRTMPWLGDDMCMKDPQGLPGLSLAQWMNMQQNPALANSLQPN 438

Query: 417 FL------------GNDHNQQYQAMLAAGMQSGDPV---RQQFMQLQQPFQYLQQ----S 457
           +             G D ++Q     A  +   D V    Q+ +Q  Q   +LQ+    S
Sbjct: 439 YAPSLSGSILQNIPGADISRQL-GFSAPQISQSDNVALNTQRLLQTAQQLDHLQKLPSTS 497

Query: 458 GSQNPLQLKQQQ--HLLQQLNSQAEDRAQQQQQPQQHMYHDALQIRTDELLQRQQSNL 513
            +   + L QQQ   + QQ      ++   Q Q Q  + H    ++T+ +LQ+QQ ++
Sbjct: 498 STLGTVLLPQQQLGDITQQPRQNLANQTIPQGQVQSQLLHPQNMVQTNNILQQQQPSI 555



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 57/93 (61%), Positives = 75/93 (80%)

Query: 679  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 738
            RT+ KVYK G+VGRS+DI+R+S Y EL+++L + FGIEG+ ED  R GW+LV+VD E+DV
Sbjct: 998  RTYTKVYKRGAVGRSIDITRYSGYEELKKDLARRFGIEGQLEDRQRIGWKLVYVDHESDV 1057

Query: 739  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 771
            LL+GDDPWE FV+ V  IKILSP++VQ+M   G
Sbjct: 1058 LLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDG 1090


>gi|356511421|ref|XP_003524425.1| PREDICTED: auxin response factor 25-like [Glycine max]
          Length = 1099

 Score =  493 bits (1268), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 248/364 (68%), Positives = 296/364 (81%), Gaps = 4/364 (1%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ K +N+ELW ACAGPL++LP+ GT VVYFPQGHSEQVAA+  K+VD+ +PNY NLP +
Sbjct: 20  GEKKTINAELWQACAGPLLNLPSPGTHVVYFPQGHSEQVAASLKKDVDAQVPNYTNLPSK 79

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPT-NYFCKTLTA 121
           + C LHNVT+HAD +TDEVYAQMTLQP+ P    D  +  ++ + S +P   +FCK LTA
Sbjct: 80  IPCLLHNVTLHADPDTDEVYAQMTLQPV-PSFDTDALLRSDIFLRSSKPQPEFFCKQLTA 138

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAEK+FP LD+S+QPPAQEL+ARDLHD  W+FRHI+RGQPKRHLLT
Sbjct: 139 SDTSTHGGFSVPRRAAEKIFPPLDYSVQPPAQELVARDLHDNVWRFRHIYRGQPKRHLLT 198

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWS+F+  KRL+AGDSVLF+ +EK QLLLGIRRA R P+ + SSVLSSDSMHIG+LAAA
Sbjct: 199 TGWSLFIGGKRLLAGDSVLFVRDEKQQLLLGIRRANRQPSNLSSSVLSSDSMHIGVLAAA 258

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           A A A NS FTVF+NPRASPSEFVIPL KY KAV+   +S GMRFRM+FETE+S  RRYM
Sbjct: 259 AQAVANNSPFTVFYNPRASPSEFVIPLAKYSKAVYSHHISPGMRFRMMFETEDSGTRRYM 318

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT--FPMYPSLFPL 359
           GTI G+SDLD VRW NS WR+++VGWDESTA ERQ RVS+WEIEP+TT  F   P  F  
Sbjct: 319 GTIIGVSDLDSVRWKNSLWRNLQVGWDESTAEERQSRVSVWEIEPVTTPYFICPPPFFRS 378

Query: 360 RLKR 363
           ++ R
Sbjct: 379 KIPR 382



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 57/93 (61%), Positives = 74/93 (79%)

Query: 679  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 738
            RT+ KVYK G+VGRS+DI+R+S Y +L+++L   FGIEG+ ED  R GW+LV+VD ENDV
Sbjct: 987  RTYTKVYKRGAVGRSIDITRYSGYEDLKQDLALRFGIEGQLEDLQRIGWKLVYVDHENDV 1046

Query: 739  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 771
            LL+GDDPWE FV+ V  IKILSP++VQ+M   G
Sbjct: 1047 LLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDG 1079


>gi|413935566|gb|AFW70117.1| hypothetical protein ZEAMMB73_866690 [Zea mays]
          Length = 1147

 Score =  492 bits (1267), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 279/510 (54%), Positives = 350/510 (68%), Gaps = 27/510 (5%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
            +N++LW+ACAGPLVSLP VG+ VVYFPQGHSEQVAA+  K++D+H+P+YPNLP +LIC 
Sbjct: 40  AINADLWYACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKDIDAHVPSYPNLPSKLICL 99

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQP-TNYFCKTLTASDTS 125
           LH+VT+HAD +TDEVYAQMTLQP++    K+     EL +   +P   +FCKTLTASDTS
Sbjct: 100 LHSVTLHADPDTDEVYAQMTLQPVN-TYGKEALQLSELALKHARPQMEFFCKTLTASDTS 158

Query: 126 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 185
           THGGFSVPRRAAEK+ P LDF +QPPAQEL ARD+HD  W FRHIFRGQPKRHLLTTGWS
Sbjct: 159 THGGFSVPRRAAEKILPPLDFGMQPPAQELQARDIHDNVWTFRHIFRGQPKRHLLTTGWS 218

Query: 186 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 245
           +FV  KRL AGDSV+F+ +E+ QLLLGIRRA R PT + SSVLSSDSMHIG+LAAAAHAA
Sbjct: 219 LFVGGKRLFAGDSVIFVRDERQQLLLGIRRASRQPTNISSSVLSSDSMHIGVLAAAAHAA 278

Query: 246 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 305
           A NS FT+F+NPRASP+EFVIP  K+ KA++  ++S+GMRFRM+FETEE  +RRYMGTIT
Sbjct: 279 ANNSPFTIFYNPRASPTEFVIPFAKFQKALYSNQISLGMRFRMMFETEELGMRRYMGTIT 338

Query: 306 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSLFPLRLKRP 364
           GI+DLDPVRW NS WR+++VGWDES AGER+ RVS+WEIEP+   F + P  F   +KRP
Sbjct: 339 GITDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSMWEIEPIAAPFFICPQPF-FGVKRP 397

Query: 365 WHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLN--FQSLGMFPWMQQRVEPSFLGNDH 422
                 S ++  +     + WL      +   T N     L +  WM           + 
Sbjct: 398 RQIDDES-SEMENLFKRAMPWLGEEICIKDAQTHNTTMPGLSLVQWM-----------NM 445

Query: 423 NQQYQAMLAAGMQSGDPVRQQFMQLQQPFQYLQQSGSQN-PLQLKQQQHLLQQLNSQAE- 480
           N+   + L  G+QS     +    L  P   +Q  G+     QL  Q HLLQQ + Q   
Sbjct: 446 NRPQSSTLNTGIQS-----EYLRSLSNP--AMQNLGAAELARQLYVQNHLLQQNSVQLNA 498

Query: 481 DRAQQQQQPQQHMYHDALQIRTDELLQRQQ 510
            +  QQ QP   +   +L     +++  QQ
Sbjct: 499 SKLPQQVQPINELAKGSLSCNQLDVIINQQ 528



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/227 (37%), Positives = 116/227 (51%), Gaps = 33/227 (14%)

Query: 577  PSQVRDFVHSMSLPSSYNG----KDAAVGTENCNTDSQNSVVFGVHID--------SSGL 624
            P+Q    +H    P+++N     KDA    E    D  N+  FG++ D        + GL
Sbjct: 881  PTQTDGLLHQ-GFPTNFNQQQMFKDALPDVEIQEVDPTNNAFFGINSDGPLGFPMETEGL 939

Query: 625  LL----PTTVS-SFTTSVD--------------PGVSSMPLGDSGF-HNSMYGCMQDSSE 664
            L+    P     + +T V+                + S   G S    NS+   + D   
Sbjct: 940  LVSAINPVKCQPNLSTDVEINYRIQKDAQQEISTSMVSQSFGQSDIAFNSIDSAINDGVM 999

Query: 665  LLHNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLR 724
            L  N          RTF KVYK G+VGRS+DI RFS Y EL+  + +MFGIEG+ ED  R
Sbjct: 1000 LNRNSCPPAPPQRMRTFTKVYKRGAVGRSIDIGRFSGYEELKHAVARMFGIEGQLEDRQR 1059

Query: 725  SGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 771
             GW+LV+ D E+DVLLLGDDPWE FV+ V  I+ILSP++VQ+M   G
Sbjct: 1060 IGWKLVYTDHEDDVLLLGDDPWEEFVNCVKCIRILSPQEVQQMSLDG 1106


>gi|379323210|gb|AFD01304.1| auxin response factor 7-2 [Brassica rapa subsp. pekinensis]
          Length = 1100

 Score =  490 bits (1262), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 256/412 (62%), Positives = 315/412 (76%), Gaps = 11/412 (2%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           GD + +NSELWHACAGPL+SLP  G+ VVYFPQGHSEQVAA+  K+ D  IP+YPNLP +
Sbjct: 16  GDRRNINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTD-FIPSYPNLPSK 74

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP-SKQPTNYFCKTLTA 121
           LIC L NVT++AD ETDEVYAQMTLQP++ +  +D  +  ++G+  ++QP  +FCKTLTA
Sbjct: 75  LICMLQNVTLNADPETDEVYAQMTLQPVN-KYDRDALLASDMGLKLNRQPNEFFCKTLTA 133

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAEK+FP+LDFS+QPP QEL+A+D+HD  W FRHI+RGQPKRHLLT
Sbjct: 134 SDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLT 193

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWSVFVS KRL AGDSVLFI + K QLLLGIRRA R    + SSV+SSDSMHIG+LAAA
Sbjct: 194 TGWSVFVSNKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGVLAAA 253

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           AHA A NS FT+F+NPRA+P+EFV+PL KY KA++  +VS+GMRFRM+FETEE  VRRYM
Sbjct: 254 AHANANNSPFTIFYNPRAAPAEFVVPLAKYTKAMY-AQVSLGMRFRMIFETEECGVRRYM 312

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRL 361
           GT+TGISDLDPVRW +S WR++++GWDES AG+R  RVS+W+IEP+ T P Y  + P   
Sbjct: 313 GTVTGISDLDPVRWKSSQWRNLQIGWDESAAGDRPSRVSVWDIEPVLT-PFY--ICPPPF 369

Query: 362 KRPWHPSTSSFNDNRDETASGLN----WLRGGTGEQGLTTLNFQSLGMFPWM 409
            RP         D+  +  S L     WL  G   +  ++  F  L +  WM
Sbjct: 370 FRPRFAGQPGMPDDETDMESALKRAMPWLDNGLEMKDSSSSIFPGLSLVQWM 421



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 62/112 (55%), Positives = 81/112 (72%), Gaps = 1/112 (0%)

Query: 679  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 738
            RT+ KV K GSVGRS+D++R+  Y+ELR +L +MFGIEG+ EDP  S W+LV+VD END+
Sbjct: 973  RTYTKVQKRGSVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHENDI 1032

Query: 739  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANSRGNCG 790
            LL+GDDPWE FV+ V  IKILS  +VQ+M   G  +  P + Q A S G+ G
Sbjct: 1033 LLVGDDPWEEFVNCVQSIKILSSAEVQQMSLDGNFAGVPVTNQ-ACSGGDSG 1083


>gi|30687957|ref|NP_568400.2| auxin response factor 7 [Arabidopsis thaliana]
 gi|332005503|gb|AED92886.1| auxin response factor 7 [Arabidopsis thaliana]
          Length = 1150

 Score =  489 bits (1260), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 256/413 (61%), Positives = 315/413 (76%), Gaps = 12/413 (2%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ + +NSELWHACAGPL+SLP  G+ VVYFPQGHSEQVAA+  K+ D  IP+YPNLP +
Sbjct: 16  GERRNINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTD-FIPSYPNLPSK 74

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP-SKQPTNYFCKTLTA 121
           LIC LHNVT++AD ETDEVYAQMTLQP++ +  +D  +  ++G+  ++QP  +FCKTLTA
Sbjct: 75  LICMLHNVTLNADPETDEVYAQMTLQPVN-KYDRDALLASDMGLKLNRQPNEFFCKTLTA 133

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAEK+FP+LDFS+QPP QEL+A+D+HD  W FRHI+RGQPKRHLLT
Sbjct: 134 SDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLT 193

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWSVFVS KRL AGDSVLFI + K QLLLGIRRA R    + SSV+SSDSMHIG+LAAA
Sbjct: 194 TGWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGVLAAA 253

Query: 242 AHAAATNSCFTVFFNPR-ASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 300
           AHA A NS FT+F+NPR A+P+EFV+PL KY KA++  +VS+GMRFRM+FETEE  VRRY
Sbjct: 254 AHANANNSPFTIFYNPRWAAPAEFVVPLAKYTKAMY-AQVSLGMRFRMIFETEECGVRRY 312

Query: 301 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLR 360
           MGT+TGISDLDPVRW NS WR++++GWDES AG+R  RVS+W+IEP+ T P Y  + P  
Sbjct: 313 MGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVLT-PFY--ICPPP 369

Query: 361 LKRPWHPSTSSFNDNRDETASGLN----WLRGGTGEQGLTTLNFQSLGMFPWM 409
             RP         D+  +  S L     WL      +  ++  F  L +  WM
Sbjct: 370 FFRPRFSGQPGMPDDETDMESALKRAMPWLDNSLEMKDPSSTIFPGLSLVQWM 422



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 58/103 (56%), Positives = 76/103 (73%)

Query: 679  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 738
            RT+ KV K GSVGRS+D++R+  Y+ELR +L +MFGIEG+ EDP  S W+LV+VD END+
Sbjct: 1038 RTYTKVQKRGSVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHENDI 1097

Query: 739  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQ 781
            LL+GDDPWE FV+ V  IKILS  +VQ+M   G  +  P + Q
Sbjct: 1098 LLVGDDPWEEFVNCVQSIKILSSAEVQQMSLDGNFAGVPVTNQ 1140


>gi|30687943|ref|NP_851046.1| auxin response factor 7 [Arabidopsis thaliana]
 gi|8071650|gb|AAF71831.1|AF186466_1 non-phototropic hypocotyl 4 [Arabidopsis thaliana]
 gi|332005501|gb|AED92884.1| auxin response factor 7 [Arabidopsis thaliana]
          Length = 1165

 Score =  489 bits (1260), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 256/413 (61%), Positives = 315/413 (76%), Gaps = 12/413 (2%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ + +NSELWHACAGPL+SLP  G+ VVYFPQGHSEQVAA+  K+ D  IP+YPNLP +
Sbjct: 16  GERRNINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTD-FIPSYPNLPSK 74

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP-SKQPTNYFCKTLTA 121
           LIC LHNVT++AD ETDEVYAQMTLQP++ +  +D  +  ++G+  ++QP  +FCKTLTA
Sbjct: 75  LICMLHNVTLNADPETDEVYAQMTLQPVN-KYDRDALLASDMGLKLNRQPNEFFCKTLTA 133

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAEK+FP+LDFS+QPP QEL+A+D+HD  W FRHI+RGQPKRHLLT
Sbjct: 134 SDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLT 193

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWSVFVS KRL AGDSVLFI + K QLLLGIRRA R    + SSV+SSDSMHIG+LAAA
Sbjct: 194 TGWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGVLAAA 253

Query: 242 AHAAATNSCFTVFFNPR-ASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 300
           AHA A NS FT+F+NPR A+P+EFV+PL KY KA++  +VS+GMRFRM+FETEE  VRRY
Sbjct: 254 AHANANNSPFTIFYNPRWAAPAEFVVPLAKYTKAMY-AQVSLGMRFRMIFETEECGVRRY 312

Query: 301 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLR 360
           MGT+TGISDLDPVRW NS WR++++GWDES AG+R  RVS+W+IEP+ T P Y  + P  
Sbjct: 313 MGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVLT-PFY--ICPPP 369

Query: 361 LKRPWHPSTSSFNDNRDETASGLN----WLRGGTGEQGLTTLNFQSLGMFPWM 409
             RP         D+  +  S L     WL      +  ++  F  L +  WM
Sbjct: 370 FFRPRFSGQPGMPDDETDMESALKRAMPWLDNSLEMKDPSSTIFPGLSLVQWM 422



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 62/112 (55%), Positives = 81/112 (72%), Gaps = 1/112 (0%)

Query: 679  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 738
            RT+ KV K GSVGRS+D++R+  Y+ELR +L +MFGIEG+ EDP  S W+LV+VD END+
Sbjct: 1038 RTYTKVQKRGSVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHENDI 1097

Query: 739  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANSRGNCG 790
            LL+GDDPWE FV+ V  IKILS  +VQ+M   G  +  P + Q A S G+ G
Sbjct: 1098 LLVGDDPWEEFVNCVQSIKILSSAEVQQMSLDGNFAGVPVTNQ-ACSGGDSG 1148


>gi|297812257|ref|XP_002874012.1| hypothetical protein ARALYDRAFT_488981 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297319849|gb|EFH50271.1| hypothetical protein ARALYDRAFT_488981 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1168

 Score =  489 bits (1258), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 256/413 (61%), Positives = 315/413 (76%), Gaps = 12/413 (2%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ + +NSELWHACAGPL+SLP  G+ VVYFPQGHSEQVAA+  K+ D  IP+YPNLP +
Sbjct: 16  GERRNINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTD-FIPSYPNLPSK 74

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP-SKQPTNYFCKTLTA 121
           LIC LHNVT++AD ETDEVYAQMTLQP++ +  +D  +  ++G+  ++QP  +FCKTLTA
Sbjct: 75  LICMLHNVTLNADPETDEVYAQMTLQPVN-KYDRDALLASDMGLKLNRQPNEFFCKTLTA 133

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAEK+FP+LDFS+QPP QEL+A+D+HD  W FRHI+RGQPKRHLLT
Sbjct: 134 SDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLT 193

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWSVFVS KRL AGDSVLFI + K QLLLGIRRA R    + SSV+SSDSMHIG+LAAA
Sbjct: 194 TGWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGVLAAA 253

Query: 242 AHAAATNSCFTVFFNPR-ASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 300
           AHA A NS FT+F+NPR A+P+EFV+PL KY KA++  +VS+GMRFRM+FETEE  VRRY
Sbjct: 254 AHANANNSPFTIFYNPRWAAPAEFVVPLAKYTKAMY-AQVSLGMRFRMIFETEECGVRRY 312

Query: 301 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLR 360
           MGT+TGISDLDPVRW NS WR++++GWDES AG+R  RVS+W+IEP+ T P Y  + P  
Sbjct: 313 MGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVLT-PFY--ICPPP 369

Query: 361 LKRPWHPSTSSFNDNRDETASGLN----WLRGGTGEQGLTTLNFQSLGMFPWM 409
             RP         D+  +  S L     WL      +  ++  F  L +  WM
Sbjct: 370 FFRPRFSGQPGMLDDETDMESALKRAMPWLDNSLEMKDPSSTIFPGLSLVQWM 422



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 59/112 (52%), Positives = 80/112 (71%), Gaps = 1/112 (0%)

Query: 679  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 738
            RT+ KV + GSVGRS+D++R+  Y+ELR +L +MFGIEG+ EDP  S W+LV+VD E D+
Sbjct: 1041 RTYTKVQERGSVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHETDI 1100

Query: 739  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANSRGNCG 790
            LL+GDDPWE FV+ V  +KILS  +VQ+M   G  +  P + Q A S G+ G
Sbjct: 1101 LLVGDDPWEEFVNFVQSLKILSSAEVQQMSLDGNFAGVPVTNQ-ACSGGDSG 1151


>gi|357138654|ref|XP_003570905.1| PREDICTED: auxin response factor 5-like [Brachypodium distachyon]
          Length = 1141

 Score =  488 bits (1257), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 281/518 (54%), Positives = 345/518 (66%), Gaps = 44/518 (8%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           +N ELWHACAGPLVSLP VG+ VVYFPQGHSEQVAA+  K+V++ +PNYPNLP +LIC L
Sbjct: 30  INGELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKDVEAQVPNYPNLPSKLICLL 89

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQP-TNYFCKTLTASDTST 126
           H+V + AD +TDEVYAQMTLQP++    K+     EL +   +P   +FCKTLTASDTST
Sbjct: 90  HSVILQADPDTDEVYAQMTLQPVN-TYAKEALQLSELALRQARPQMEFFCKTLTASDTST 148

Query: 127 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 186
           HGGFSVPRRAAEK+FPSLDFSLQPP QEL ARD+HD  W FRHIFRGQPKRHLLTTGWS+
Sbjct: 149 HGGFSVPRRAAEKIFPSLDFSLQPPCQELQARDIHDNIWTFRHIFRGQPKRHLLTTGWSL 208

Query: 187 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 246
           FVS K+L AGDSV+F+ +EK+QLLLGIRRA R PT + SSVLSSDSMHIG+LAAAAHAAA
Sbjct: 209 FVSGKKLFAGDSVIFVRDEKHQLLLGIRRANRQPTNISSSVLSSDSMHIGVLAAAAHAAA 268

Query: 247 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 306
            +S FT+F+NPRASP+EFVIP  KY KA++  ++S+GMRFRM  ETEE   RRYMGTITG
Sbjct: 269 NSSPFTIFYNPRASPTEFVIPFAKYQKAMYSNQISLGMRFRMTCETEELGTRRYMGTITG 328

Query: 307 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSLFPLRLKRPW 365
           ISDLDPVRW +S WRS++VGWDES AGER+ RVS+WEIEPL   F + P  F   +KR  
Sbjct: 329 ISDLDPVRWKSSQWRSLQVGWDESAAGERRNRVSIWEIEPLAAPFFICPQPF-FGVKR-- 385

Query: 366 HPSTSSFNDNRDETAS----GLNWLRGGTGEQGLTT--LNFQSLGMFPWMQQRVEPSFLG 419
              +   +D   E  +     + WL      +   T       L +  WM          
Sbjct: 386 ---SRQLDDESSEMENLWKRAMPWLGEEVCIKDAQTQGATIPGLSLVQWM---------- 432

Query: 420 NDHNQQYQAMLAAGMQS------GDPVRQQFMQLQQPFQYLQQSGSQNPLQLKQQQHLLQ 473
           N + QQ  ++ +  MQS       +P  Q F              +    QL  Q HLLQ
Sbjct: 433 NMNRQQSSSLASTSMQSEYLRSASNPAMQNF------------GAADLARQLYMQNHLLQ 480

Query: 474 QLNSQAE-DRAQQQQQPQQHMYHDALQIRTDELLQRQQ 510
           Q N      +  +Q +P   +  + L +     +++QQ
Sbjct: 481 QNNIHLNSSKLHEQAKPVNDLCKETLPLDQLGAIRKQQ 518



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 57/93 (61%), Positives = 72/93 (77%)

Query: 679  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 738
            RTF KVYK G+VGRS+DI ++S Y EL + L +MFGIEG+ ED  R GW+LV+ D E+DV
Sbjct: 1008 RTFTKVYKRGAVGRSIDIGKYSGYGELNQALARMFGIEGQLEDRQRIGWKLVYTDHEDDV 1067

Query: 739  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 771
            LLLGDDPWE FV+ V  I+ILSP++VQ+M   G
Sbjct: 1068 LLLGDDPWEEFVNCVRCIRILSPQEVQQMSLDG 1100


>gi|295844314|gb|ADG43154.1| auxin response factor 20 [Zea mays]
          Length = 1149

 Score =  487 bits (1254), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 279/512 (54%), Positives = 350/512 (68%), Gaps = 29/512 (5%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
            +N++LW+ACAGPLVSLP VG+ VVYFPQGHSEQVAA+  K++D+H+P+YPNLP +LIC 
Sbjct: 40  AINADLWYACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKDIDAHVPSYPNLPSKLICL 99

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQP-TNYFCKTLTASDTS 125
           LH+VT+HAD +TDEVYAQMTLQP++    K+     EL +   +P   +FCKTLTASDTS
Sbjct: 100 LHSVTLHADPDTDEVYAQMTLQPVN-TYGKEALQLSELALKHARPQMEFFCKTLTASDTS 158

Query: 126 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 185
           THGGFSVPRRAAEK+ P LDF +QPPAQEL ARD+HD  W FRHIFRGQPKRHLLTTGWS
Sbjct: 159 THGGFSVPRRAAEKILPPLDFGMQPPAQELQARDIHDNVWTFRHIFRGQPKRHLLTTGWS 218

Query: 186 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 245
           +FV  KRL AGDSV+F+ +E+ QLLLGIRRA R PT + SSVLSSDSMHIG+LAAAAHAA
Sbjct: 219 LFVGGKRLFAGDSVIFVRDERQQLLLGIRRASRQPTNISSSVLSSDSMHIGVLAAAAHAA 278

Query: 246 ATNSCFTVFFNPR--ASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGT 303
           A NS FT+F+NPR  ASP+EFVIP  K+ KA++  ++S+GMRFRM+FETEE  +RRYMGT
Sbjct: 279 ANNSPFTIFYNPRRVASPTEFVIPFAKFQKALYSNQISLGMRFRMMFETEELGMRRYMGT 338

Query: 304 ITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSLFPLRLK 362
           ITGI+DLDPVRW NS WR+++VGWDES AGER+ RVS+WEIEP+   F + P  F   +K
Sbjct: 339 ITGITDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSMWEIEPIAAPFFICPQPF-FGVK 397

Query: 363 RPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLN--FQSLGMFPWMQQRVEPSFLGN 420
           RP      S ++  +     + WL      +   T N     L +  WM           
Sbjct: 398 RPRQIDDES-SEMENLFKRAMPWLGEEICIKDAQTHNTTMPGLSLVQWM----------- 445

Query: 421 DHNQQYQAMLAAGMQSGDPVRQQFMQLQQPFQYLQQSGSQN-PLQLKQQQHLLQQLNSQA 479
           + N+   + L  G+QS     +    L  P   +Q  G+     QL  Q HLLQQ + Q 
Sbjct: 446 NMNRPQSSTLNTGIQS-----EYLRSLSNP--AMQNLGAAELARQLYVQNHLLQQNSVQL 498

Query: 480 E-DRAQQQQQPQQHMYHDALQIRTDELLQRQQ 510
              +  QQ QP   +   +L     +++  QQ
Sbjct: 499 NASKLPQQVQPINELAKGSLSCNQLDVIINQQ 530



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/227 (37%), Positives = 116/227 (51%), Gaps = 33/227 (14%)

Query: 577  PSQVRDFVHSMSLPSSYNG----KDAAVGTENCNTDSQNSVVFGVHID--------SSGL 624
            P+Q    +H    P+++N     KDA    E    D  N+  FG++ D        + GL
Sbjct: 883  PTQTDGLLHQ-GFPTNFNQQQMFKDALPDVEIQEVDPTNNAFFGINSDGPLGFPMETEGL 941

Query: 625  LL----PTTVS-SFTTSVD--------------PGVSSMPLGDSGF-HNSMYGCMQDSSE 664
            L+    P     + +T V+                + S   G S    NS+   + D   
Sbjct: 942  LVSAINPVKCQPNLSTDVEINYRIQKDAQQEISTSMVSQSFGQSDIAFNSIDSAINDGVM 1001

Query: 665  LLHNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLR 724
            L  N          RTF KVYK G+VGRS+DI RFS Y EL+  + +MFGIEG+ ED  R
Sbjct: 1002 LNRNSCPPAPPQRMRTFTKVYKRGAVGRSIDIGRFSGYEELKHAVARMFGIEGQLEDRQR 1061

Query: 725  SGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 771
             GW+LV+ D E+DVLLLGDDPWE FV+ V  I+ILSP++VQ+M   G
Sbjct: 1062 IGWKLVYTDHEDDVLLLGDDPWEEFVNCVKCIRILSPQEVQQMSLDG 1108


>gi|356496641|ref|XP_003517174.1| PREDICTED: auxin response factor 6-like [Glycine max]
          Length = 1104

 Score =  486 bits (1252), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 253/361 (70%), Positives = 298/361 (82%), Gaps = 2/361 (0%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           + +ELWHACAGPLV LP  GT V+YFPQGHSEQV+A+ N++V S IPNYPNLP +L+C L
Sbjct: 7   IKAELWHACAGPLVKLPPSGTHVIYFPQGHSEQVSASLNRDVHSQIPNYPNLPSKLLCLL 66

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPS-KQPTNYFCKTLTASDTST 126
           H +T+HAD +TD+VYAQ+TLQPL P   KD  +  +L + S K P ++FCK LTASDTST
Sbjct: 67  HTLTLHADPQTDQVYAQITLQPL-PSFDKDALLRSDLALESTKPPPDFFCKQLTASDTST 125

Query: 127 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 186
           HGGFSVPRRAAEK+FP LD+S+QPPAQEL+ARDLHD  WKFRHI+RGQPKRHLLTTGWS+
Sbjct: 126 HGGFSVPRRAAEKIFPPLDYSMQPPAQELVARDLHDTVWKFRHIYRGQPKRHLLTTGWSL 185

Query: 187 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 246
           FVS KRL AGDSVLFI +EK QLLLGIRRA R PT + SSVLSSDSMHIG+LAAAAHAAA
Sbjct: 186 FVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHAAA 245

Query: 247 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 306
            NS FTVF+NPRASPSEFVIPL KY K+V+  + S+GMRFRM+FETE+S  RR+MGT+TG
Sbjct: 246 NNSPFTVFYNPRASPSEFVIPLAKYYKSVYSHQPSLGMRFRMMFETEDSGTRRHMGTVTG 305

Query: 307 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWH 366
           ISDLDPV+W NS WR+++VGWDESTAGE++ RVS+WEIEP+T           R KRP  
Sbjct: 306 ISDLDPVQWKNSQWRNLQVGWDESTAGEKRSRVSIWEIEPVTAPFFICPPPFFRSKRPRQ 365

Query: 367 P 367
           P
Sbjct: 366 P 366



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 58/93 (62%), Positives = 75/93 (80%)

Query: 679  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 738
            RT+ KVYK G+VGRS+DI+R+S Y EL+++L + FGIEG+ ED  R GW+LV+VD E+DV
Sbjct: 992  RTYTKVYKRGAVGRSIDITRYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHESDV 1051

Query: 739  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 771
            LLLGDDPWE FV+ V  IKILSP++VQ+M   G
Sbjct: 1052 LLLGDDPWEEFVNCVRCIKILSPQEVQQMSLDG 1084


>gi|4103243|gb|AAD04807.1| BIPOSTO [Arabidopsis thaliana]
          Length = 1165

 Score =  486 bits (1250), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 254/413 (61%), Positives = 314/413 (76%), Gaps = 12/413 (2%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ + +NSELWHACAGPL+SLP  G+ VVYFPQGHSEQVAA+  K+ D  IP+YPNLP +
Sbjct: 16  GERRNINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTD-FIPSYPNLPSK 74

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP-SKQPTNYFCKTLTA 121
           LIC LHNVT++AD ETDEVYAQMTLQP++ +  ++  +  ++G+  ++QP  +FCKTLTA
Sbjct: 75  LICMLHNVTLNADPETDEVYAQMTLQPVN-KYDRNALLASDMGLKLNRQPNEFFCKTLTA 133

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAEK+FP+LDFS+QPP QEL+A+D+HD  W FRHI+RGQPKRHLLT
Sbjct: 134 SDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLT 193

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWSVFVS KR  AGDSVLFI + K QLLLGIRRA R    + SSV+SSDSMHIG+LAAA
Sbjct: 194 TGWSVFVSTKRFFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGVLAAA 253

Query: 242 AHAAATNSCFTVFFNPR-ASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 300
           AHA A NS FT+F+NPR A+P+EFV+PL KY KA++  +VS+GMRFRM+FETEE  VRRY
Sbjct: 254 AHANANNSPFTIFYNPRWAAPAEFVVPLAKYTKAMY-AQVSLGMRFRMIFETEECGVRRY 312

Query: 301 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLR 360
           MGT+TGISDLDPVRW NS WR++++GWDES AG+R  RVS+W+IEP+ T P Y  + P  
Sbjct: 313 MGTVTGISDLDPVRWENSQWRNLQIGWDESAAGDRPSRVSVWDIEPVLT-PFY--ICPPP 369

Query: 361 LKRPWHPSTSSFNDNRDETASGLN----WLRGGTGEQGLTTLNFQSLGMFPWM 409
             RP         D+  +  S L     WL      +  ++  F  L +  WM
Sbjct: 370 FFRPRFSGQPGMPDDETDMESALKRAMPWLDNSLEMKDPSSTIFPGLSLVQWM 422



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 62/112 (55%), Positives = 81/112 (72%), Gaps = 1/112 (0%)

Query: 679  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 738
            RT+ KV K GSVGRS+D++R+  Y+ELR +L +MFGIEG+ EDP  S W+LV+VD END+
Sbjct: 1038 RTYTKVQKRGSVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHENDI 1097

Query: 739  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANSRGNCG 790
            LL+GDDPWE FV+ V  IKILS  +VQ+M   G  +  P + Q A S G+ G
Sbjct: 1098 LLVGDDPWEEFVNCVQSIKILSSAEVQQMSLDGNFAGVPVTNQ-ACSGGDSG 1148


>gi|297603514|ref|NP_001054169.2| Os04g0664400 [Oryza sativa Japonica Group]
 gi|75248068|sp|Q8S983.1|ARFK_ORYSJ RecName: Full=Auxin response factor 11; AltName: Full=OsARF5;
           AltName: Full=OsMP; AltName: Full=Protein
           MONOPTEROS-like
 gi|158563897|sp|Q01K26.2|ARFK_ORYSI RecName: Full=Auxin response factor 11; AltName: Full=OsARF5;
           AltName: Full=OsMP; AltName: Full=Protein
           MONOPTEROS-like
 gi|19352037|dbj|BAB85912.1| Arabidopsis Monopteros-like protein [Oryza sativa]
 gi|255675857|dbj|BAF16083.2| Os04g0664400 [Oryza sativa Japonica Group]
          Length = 955

 Score =  485 bits (1249), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 242/355 (68%), Positives = 283/355 (79%), Gaps = 5/355 (1%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G  K +NSELWHACAGPLV LP  G+ V YFPQGHSEQVAATT K  +S IPNYPNLP Q
Sbjct: 31  GAKKVINSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTRKIPNSRIPNYPNLPSQ 90

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELG--IPSKQPTNYFCKTLT 120
           L+CQ+HN+T+HAD +TDEVYAQMTLQP++ E   D F    LG    SK PT YFCK LT
Sbjct: 91  LLCQVHNITLHADKDTDEVYAQMTLQPVNSE--TDVFPIPTLGAYTKSKHPTEYFCKNLT 148

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
           ASDTSTHGGFSVPRRAAEK+FP LD+S+QPP QELI RDLHD  W FRHI+RGQPKRHLL
Sbjct: 149 ASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLL 208

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 240
           TTGWS+FV AKRL AGDSVLFI +EK+QLLLG+RRA R  T++ SSVLS+DSMHIG+LAA
Sbjct: 209 TTGWSLFVGAKRLKAGDSVLFIRDEKSQLLLGVRRATRQQTMLSSSVLSTDSMHIGVLAA 268

Query: 241 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 300
           AAHAA++ S FT+++NPR SPS FVIP+ +Y KA +  + SVGMRF M+FETEESS RRY
Sbjct: 269 AAHAASSGSSFTIYYNPRTSPSPFVIPVARYNKATY-MQPSVGMRFAMMFETEESSKRRY 327

Query: 301 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS 355
            GT+ GISD DP+RW NS WR+++V WDE   GER  RVS+W+IE      ++PS
Sbjct: 328 TGTVVGISDYDPMRWPNSKWRNLQVEWDEHGYGERPERVSIWDIETPENTLVFPS 382



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 74/178 (41%), Positives = 106/178 (59%), Gaps = 14/178 (7%)

Query: 609 SQNSVVFGVHIDSSGLLLPTTVSS---FTTSVDPGV-SSMP-------LGDSGFHNSMYG 657
           SQ++ + G+H++S+   + TT  S    T   D G+ S +P       L     H +  G
Sbjct: 768 SQSANLSGLHMESTHRSINTTSCSQPMSTGGFDAGMYSKLPRLKESQILSLPEIHTNSMG 827

Query: 658 ---CMQDSSELLHNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFG 714
              C  D++E   +        P RT+ KV K GSVGRS+D++ F +Y+ELR  +  MFG
Sbjct: 828 TSACSMDATEYSLDRSAKPMKPPVRTYTKVQKQGSVGRSIDVTGFRNYHELRSAIACMFG 887

Query: 715 IEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGV 772
           ++GK E P  S W+LV+VD ENDVLL+GDDPWE F++ V  I+ILSP +VQ+M E G+
Sbjct: 888 LQGKLEHPGSSEWKLVYVDYENDVLLVGDDPWEEFINCVRCIRILSPSEVQQMSENGM 945


>gi|357162522|ref|XP_003579438.1| PREDICTED: auxin response factor 11-like [Brachypodium distachyon]
          Length = 955

 Score =  485 bits (1249), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 243/355 (68%), Positives = 281/355 (79%), Gaps = 5/355 (1%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G  K +NSELWHACAGPLV LP  G+ V YFPQGHSEQVAATT K  +S IPNYPNLP Q
Sbjct: 32  GAKKVINSELWHACAGPLVFLPQRGSLVYYFPQGHSEQVAATTRKVPNSRIPNYPNLPSQ 91

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELG--IPSKQPTNYFCKTLT 120
           L+CQ+HN+TMHAD ETDEVYAQMTLQP++ E   D F    LG    SK P  YFCK LT
Sbjct: 92  LLCQVHNITMHADKETDEVYAQMTLQPVNSE--TDVFPIPALGSYAKSKHPPEYFCKNLT 149

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
           ASDTSTHGGFSVPRRAAEK+FP LD+S+QPP QELI RDLHD  W FRHI+RGQPKRHLL
Sbjct: 150 ASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLL 209

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 240
           TTGWS+FV AKRL AGDSVLFI +EK+QLLLG+RRA R  T + SSVLS+DSMHIG+LAA
Sbjct: 210 TTGWSLFVGAKRLKAGDSVLFIRDEKSQLLLGVRRATRQQTQLSSSVLSTDSMHIGVLAA 269

Query: 241 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 300
           AAHAA++ S FT+++NPR SPS FV+PL +Y KA +  + SVGMRF M+FETEESS RRY
Sbjct: 270 AAHAASSGSSFTIYYNPRTSPSPFVVPLARYNKANY-VQQSVGMRFAMMFETEESSKRRY 328

Query: 301 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS 355
            GTI G+SD DP+RW NS WR+++V WDE   GER  RVS+W+IE      ++PS
Sbjct: 329 TGTIVGVSDYDPIRWPNSKWRNLQVEWDEHGYGERPERVSIWDIETPENALVFPS 383



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 61/125 (48%), Positives = 81/125 (64%), Gaps = 3/125 (2%)

Query: 651 FHNSMYG---CMQDSSELLHNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELRE 707
            HNS  G   C  D ++   +        P RT+ KV K GSVGRS+D++R+  Y ELR 
Sbjct: 820 IHNSSRGTSSCSMDVTDYSIDRSAKPLKPPVRTYTKVQKLGSVGRSIDVTRYRDYRELRS 879

Query: 708 ELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
            +  MFG++GK E P  S W+LV+VD ENDVLL+GDDPWE F++ V  I+ILSP +VQ+M
Sbjct: 880 AIASMFGLQGKLEHPGSSEWKLVYVDYENDVLLVGDDPWEEFINCVRCIRILSPSEVQQM 939

Query: 768 GEQGV 772
            E G+
Sbjct: 940 SESGM 944


>gi|356527714|ref|XP_003532453.1| PREDICTED: auxin response factor 25-like [Glycine max]
          Length = 1113

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 247/366 (67%), Positives = 292/366 (79%), Gaps = 8/366 (2%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ K +N+ELW ACAGPL++LP+ GT VVYFPQGHSEQVAA+  K+VD+ +PNY NLP +
Sbjct: 20  GEKKSINAELWQACAGPLLNLPSPGTHVVYFPQGHSEQVAASLKKDVDAQVPNYTNLPSK 79

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFV--PIELGIPSKQPTNYFCKTLT 120
           + C LHNVT+HAD +TDEVYAQM L+P+ P    D  +   I L +   QP  +FCK LT
Sbjct: 80  IPCLLHNVTLHADPDTDEVYAQMALRPV-PSFDTDALLRSDISLKLSKPQP-EFFCKQLT 137

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
           ASDTSTHGGFSVPRRAAEK+FP LD+SLQ P QEL+ARDLHD  W+FRHI+RG+PKRHLL
Sbjct: 138 ASDTSTHGGFSVPRRAAEKIFPPLDYSLQSPVQELVARDLHDNVWRFRHIYRGKPKRHLL 197

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 240
           TTGWS+F+S KRL+AGDSVLF+ +EK QLLLGIRRA R P+ + SSVLSSDSMHIG+LAA
Sbjct: 198 TTGWSLFISGKRLLAGDSVLFVRDEKQQLLLGIRRANRQPSNLSSSVLSSDSMHIGVLAA 257

Query: 241 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 300
           AA A A NS FTVF+NPRASPSEFVIPL KY KAV+   +S GM FRM FETE+S  RRY
Sbjct: 258 AAQAVANNSPFTVFYNPRASPSEFVIPLAKYYKAVYSHHISPGMHFRMTFETEDSGTRRY 317

Query: 301 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT--FPMYPSLFP 358
           MGTI G+SDLD VRW NS WR+++VGWDESTA +R+ RVS+WEIEP+TT  F   P  F 
Sbjct: 318 MGTIIGVSDLDSVRWKNSLWRNLQVGWDESTAEDRRSRVSVWEIEPVTTPYFICPPPFF- 376

Query: 359 LRLKRP 364
            R KRP
Sbjct: 377 -RSKRP 381



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 58/93 (62%), Positives = 74/93 (79%)

Query: 679  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 738
            RT+ KVYK G+VGRS+DI+R+S Y EL+++L   FGIEG+ ED  R GW+LV+VD ENDV
Sbjct: 1001 RTYTKVYKRGAVGRSIDITRYSGYEELKQDLALKFGIEGQLEDRERIGWKLVYVDHENDV 1060

Query: 739  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 771
            LL+GDDPWE FV+ V  IKILSP++VQ+M   G
Sbjct: 1061 LLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDG 1093


>gi|15223692|ref|NP_173414.1| auxin response factor 5 [Arabidopsis thaliana]
 gi|21263766|sp|P93024.3|ARFE_ARATH RecName: Full=Auxin response factor 5; AltName:
           Full=Auxin-responsive protein IAA24; AltName:
           Full=Transcription factor MONOPTEROS
 gi|12248005|gb|AAG50094.1|AF334716_1 auxin response factor 5 [Arabidopsis thaliana]
 gi|2961085|gb|AAC39410.1| transcription factor [Arabidopsis thaliana]
 gi|25083308|gb|AAN72061.1| transcription factor [Arabidopsis thaliana]
 gi|31711776|gb|AAP68244.1| At1g19850 [Arabidopsis thaliana]
 gi|332191785|gb|AEE29906.1| auxin response factor 5 [Arabidopsis thaliana]
          Length = 902

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 233/363 (64%), Positives = 286/363 (78%), Gaps = 5/363 (1%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           +NSELWHACAGPLV LP VG+ V YF QGHSEQVA +T +   + +PNYPNLP QL+CQ+
Sbjct: 51  INSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQV 110

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGI--PSKQPTNYFCKTLTASDTS 125
           HNVT+HAD ++DE+YAQM+LQP+  E  +D F   + G+   SK PT +FCKTLTASDTS
Sbjct: 111 HNVTLHADKDSDEIYAQMSLQPVHSE--RDVFPVPDFGMLRGSKHPTEFFCKTLTASDTS 168

Query: 126 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 185
           THGGFSVPRRAAEK+FP LD+S QPP QEL+ RDLH+  W FRHI+RGQPKRHLLTTGWS
Sbjct: 169 THGGFSVPRRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTTGWS 228

Query: 186 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 245
           +FV +KRL AGDSVLFI +EK+QL++G+RRA R  T +PSSVLS+DSMHIG+LAAAAHA 
Sbjct: 229 LFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAAAAHAT 288

Query: 246 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 305
           A  + F +F+NPRA P+EFVIPL KY KA+  +++SVGMRF M+FETE+S  RRYMGTI 
Sbjct: 289 ANRTPFLIFYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGKRRYMGTIV 348

Query: 306 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPW 365
           GISDLDP+RW  S WR+++V WDE    ++  RVS W+IE   +  ++PSL    LKR  
Sbjct: 349 GISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIETPESLFIFPSLTS-GLKRQL 407

Query: 366 HPS 368
           HPS
Sbjct: 408 HPS 410



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 53/95 (55%), Positives = 71/95 (74%)

Query: 679 RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 738
           RT+ KV K+GSVGRS+D++ F  Y EL+  +  MFG+EG    P  SGW+LV+VD E+DV
Sbjct: 793 RTYTKVQKTGSVGRSIDVTSFKDYEELKSAIECMFGLEGLLTHPQSSGWKLVYVDYESDV 852

Query: 739 LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVE 773
           LL+GDDPWE FV  V  I+ILSP +VQ+M E+G++
Sbjct: 853 LLVGDDPWEEFVGCVRCIRILSPTEVQQMSEEGMK 887


>gi|2708484|gb|AAB92476.1| IAA24 [Arabidopsis thaliana]
          Length = 890

 Score =  479 bits (1233), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 233/363 (64%), Positives = 286/363 (78%), Gaps = 5/363 (1%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           +NSELWHACAGPLV LP VG+ V YF QGHSEQVA +T +   + +PNYPNLP QL+CQ+
Sbjct: 39  INSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQV 98

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGI--PSKQPTNYFCKTLTASDTS 125
           HNVT+HAD ++DE+YAQM+LQP+  E  +D F   + G+   SK PT +FCKTLTASDTS
Sbjct: 99  HNVTLHADKDSDEIYAQMSLQPVHSE--RDVFPVPDFGMLRGSKHPTEFFCKTLTASDTS 156

Query: 126 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 185
           THGGFSVPRRAAEK+FP LD+S QPP QEL+ RDLH+  W FRHI+RGQPKRHLLTTGWS
Sbjct: 157 THGGFSVPRRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTTGWS 216

Query: 186 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 245
           +FV +KRL AGDSVLFI +EK+QL++G+RRA R  T +PSSVLS+DSMHIG+LAAAAHA 
Sbjct: 217 LFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAAAAHAT 276

Query: 246 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 305
           A  + F +F+NPRA P+EFVIPL KY KA+  +++SVGMRF M+FETE+S  RRYMGTI 
Sbjct: 277 ANRTPFLIFYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGKRRYMGTIV 336

Query: 306 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPW 365
           GISDLDP+RW  S WR+++V WDE    ++  RVS W+IE   +  ++PSL    LKR  
Sbjct: 337 GISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIETPESLFIFPSLTS-GLKRQL 395

Query: 366 HPS 368
           HPS
Sbjct: 396 HPS 398



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 53/95 (55%), Positives = 71/95 (74%)

Query: 679 RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 738
           RT+ KV K+GSVGRS+D++ F  Y EL+  +  MFG+EG    P  SGW+LV+VD E+DV
Sbjct: 781 RTYTKVQKTGSVGRSIDVTSFKDYEELKSAIECMFGLEGLLTHPQSSGWKLVYVDYESDV 840

Query: 739 LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVE 773
           LL+GDDPWE FV  V  I+ILSP +VQ+M E+G++
Sbjct: 841 LLVGDDPWEEFVGCVRCIRILSPTEVQQMSEEGMK 875


>gi|2982222|gb|AAC60794.1| transcription factor [Arabidopsis thaliana]
          Length = 902

 Score =  479 bits (1233), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 233/363 (64%), Positives = 286/363 (78%), Gaps = 5/363 (1%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           +NSELWHACAGPLV LP VG+ V YF QGHSEQVA +T +   + +PNYPNLP QL+CQ+
Sbjct: 51  INSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQV 110

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGI--PSKQPTNYFCKTLTASDTS 125
           HNVT+HAD ++DE+YAQM+LQP+  E  +D F   + G+   SK PT +FCKTLTASDTS
Sbjct: 111 HNVTLHADKDSDEIYAQMSLQPVHSE--RDVFPVPDFGMLRGSKHPTEFFCKTLTASDTS 168

Query: 126 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 185
           THGGFSVPRRAAEK+FP LD+S QPP QEL+ RDLH+  W FRHI+RGQPKRHLLTTGWS
Sbjct: 169 THGGFSVPRRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTTGWS 228

Query: 186 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 245
           +FV +KRL AGDSVLFI +EK+QL++G+RRA R  T +PSSVLS+DSMHIG+LAAAAHA 
Sbjct: 229 LFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAAAAHAT 288

Query: 246 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 305
           A  + F +F+NPRA P+EFVIPL KY KA+  +++SVGMRF M+FETE+S  RRYMGTI 
Sbjct: 289 ANRTPFLIFYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGKRRYMGTIV 348

Query: 306 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPW 365
           GISDLDP+RW  S WR+++V WDE    ++  RVS W+IE   +  ++PSL    LKR  
Sbjct: 349 GISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIETPESLFIFPSLTS-GLKRQL 407

Query: 366 HPS 368
           HPS
Sbjct: 408 HPS 410



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 53/96 (55%), Positives = 72/96 (75%)

Query: 678 TRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 737
            RT++KV K+GSVGRS+D++ F  Y EL+  +  MFG+EG    P  SGW+LV+VD E+D
Sbjct: 792 VRTYIKVQKTGSVGRSIDVTSFKDYEELKSAIECMFGLEGLLTHPQSSGWKLVYVDYESD 851

Query: 738 VLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVE 773
           VLL+GDDPWE FV  V  I+ILSP +VQ+M E+G++
Sbjct: 852 VLLVGDDPWEEFVGCVRCIRILSPTEVQQMSEEGMK 887


>gi|379323200|gb|AFD01299.1| auxin response factor 5-1 [Brassica rapa subsp. pekinensis]
          Length = 867

 Score =  479 bits (1233), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 231/363 (63%), Positives = 288/363 (79%), Gaps = 5/363 (1%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           +NSELWHACAGPLV+LP VG+ V YFPQGHSEQVA +T +   + +PNYPNLP QL+CQ+
Sbjct: 49  INSELWHACAGPLVTLPQVGSLVYYFPQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQV 108

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGI--PSKQPTNYFCKTLTASDTS 125
           HNVT+HAD ++DE+YAQM+LQP+  E  +D F   E G+   SK P+ +FCKTLTASDTS
Sbjct: 109 HNVTLHADKDSDEIYAQMSLQPVHSE--RDVFPVPEFGLLRGSKHPSEFFCKTLTASDTS 166

Query: 126 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 185
           THGGFSVPRRAAEK+FP LD++ QPP QEL+ RDLH+  W FRHI+RGQPKRHLLTTGWS
Sbjct: 167 THGGFSVPRRAAEKLFPPLDYTAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTTGWS 226

Query: 186 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 245
           +FV +KRL AGDSVLFI +EK+QL++G+RRA R  T +PSSVLS+DSMHIG+LAAAAHA 
Sbjct: 227 LFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAAAAHAT 286

Query: 246 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 305
           A  + F +F+NPRA P+EFVIP+ KY KA+  +++SV MRF M+FETE+S  RRYMGTI 
Sbjct: 287 ANRTPFLIFYNPRACPAEFVIPIAKYRKAICGSQLSVSMRFGMMFETEDSGKRRYMGTIV 346

Query: 306 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPW 365
           GISDLDP+RW+ S WR+++V WDE    ++  RVS W+IE   +  ++PSL    LKR  
Sbjct: 347 GISDLDPLRWAGSKWRNLQVEWDEPGCNDKPTRVSPWDIETPESLFIFPSLTS-GLKRQL 405

Query: 366 HPS 368
           HPS
Sbjct: 406 HPS 408


>gi|312282955|dbj|BAJ34343.1| unnamed protein product [Thellungiella halophila]
          Length = 901

 Score =  479 bits (1233), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 232/363 (63%), Positives = 286/363 (78%), Gaps = 5/363 (1%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           +NSELWHACAGPLV LP VG+ V YF QGHSEQVA +T +   + +PNYPNLP QL+CQ+
Sbjct: 48  INSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQV 107

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGI--PSKQPTNYFCKTLTASDTS 125
           HNVT+HAD ++DE+YAQM+LQP+  E  +D F   + G+   SK PT +FCKTLTASDTS
Sbjct: 108 HNVTLHADKDSDEIYAQMSLQPVHSE--RDVFPVPDFGLLRGSKHPTEFFCKTLTASDTS 165

Query: 126 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 185
           THGGFSVPRRAAEK+FP LD++ QPP QEL+ RDLH+  W FRHI+RGQPKRHLLTTGWS
Sbjct: 166 THGGFSVPRRAAEKLFPPLDYTAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTTGWS 225

Query: 186 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 245
           +FV +KRL AGDSVLFI +EK+QL++G+RRA R  T +PSSVLS+DSMHIG+LAAAAHA 
Sbjct: 226 LFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAAAAHAT 285

Query: 246 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 305
           A  + F +F+NPRA P+EFVIPL KY KA+  +++SVGMRF M+FETE+S  RRYMGTI 
Sbjct: 286 ANRTPFLIFYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGKRRYMGTIV 345

Query: 306 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPW 365
           GISDLDP+RW  S WR+++V WDE    ++  RVS W+IE   +  ++PSL    LKR  
Sbjct: 346 GISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIETPESLFIFPSLTS-GLKRQL 404

Query: 366 HPS 368
           HPS
Sbjct: 405 HPS 407



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 60/115 (52%), Positives = 82/115 (71%), Gaps = 2/115 (1%)

Query: 661 DSSELLHNVGQIDQL-TP-TRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGK 718
           D+S L ++ G   +L TP  RT+ KV K+GSVGRS+D++ F  Y EL+  +  MFG+EG 
Sbjct: 772 DTSLLQNSKGSWQKLATPRVRTYTKVQKTGSVGRSIDVTSFRDYEELKSAIECMFGLEGL 831

Query: 719 FEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVE 773
              P  SGW+LV+VD E+DVLL+GDDPWE FV  V  I+ILSP +VQ+M E+G++
Sbjct: 832 LTQPQSSGWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPTEVQQMSEEGMK 886


>gi|10086486|gb|AAG12546.1|AC007797_6 IAA24 [Arabidopsis thaliana]
          Length = 850

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 233/363 (64%), Positives = 286/363 (78%), Gaps = 5/363 (1%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           +NSELWHACAGPLV LP VG+ V YF QGHSEQVA +T +   + +PNYPNLP QL+CQ+
Sbjct: 40  INSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQV 99

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGI--PSKQPTNYFCKTLTASDTS 125
           HNVT+HAD ++DE+YAQM+LQP+  E  +D F   + G+   SK PT +FCKTLTASDTS
Sbjct: 100 HNVTLHADKDSDEIYAQMSLQPVHSE--RDVFPVPDFGMLRGSKHPTEFFCKTLTASDTS 157

Query: 126 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 185
           THGGFSVPRRAAEK+FP LD+S QPP QEL+ RDLH+  W FRHI+RGQPKRHLLTTGWS
Sbjct: 158 THGGFSVPRRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTTGWS 217

Query: 186 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 245
           +FV +KRL AGDSVLFI +EK+QL++G+RRA R  T +PSSVLS+DSMHIG+LAAAAHA 
Sbjct: 218 LFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAAAAHAT 277

Query: 246 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 305
           A  + F +F+NPRA P+EFVIPL KY KA+  +++SVGMRF M+FETE+S  RRYMGTI 
Sbjct: 278 ANRTPFLIFYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGKRRYMGTIV 337

Query: 306 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPW 365
           GISDLDP+RW  S WR+++V WDE    ++  RVS W+IE   +  ++PSL    LKR  
Sbjct: 338 GISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIETPESLFIFPSLTS-GLKRQL 396

Query: 366 HPS 368
           HPS
Sbjct: 397 HPS 399



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 40/69 (57%), Positives = 52/69 (75%)

Query: 679 RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 738
           RT+ KV K+GSVGRS+D++ F  Y EL+  +  MFG+EG    P  SGW+LV+VD E+DV
Sbjct: 782 RTYTKVQKTGSVGRSIDVTSFKDYEELKSAIECMFGLEGLLTHPQSSGWKLVYVDYESDV 841

Query: 739 LLLGDDPWE 747
           LL+GDDPWE
Sbjct: 842 LLVGDDPWE 850


>gi|297844950|ref|XP_002890356.1| hypothetical protein ARALYDRAFT_472210 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297336198|gb|EFH66615.1| hypothetical protein ARALYDRAFT_472210 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 903

 Score =  478 bits (1231), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 232/364 (63%), Positives = 286/364 (78%), Gaps = 6/364 (1%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           +NSELWHACAGPLV LP VG+ V YF QGHSEQVA +T +   + +PNYPNLP QL+CQ+
Sbjct: 51  INSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQV 110

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGI---PSKQPTNYFCKTLTASDT 124
           HNVT+HAD ++DE+YAQM+LQP+  E  +D F   + G+    SK PT +FCKTLTASDT
Sbjct: 111 HNVTLHADKDSDEIYAQMSLQPVHSE--RDVFPVPDFGMLRGGSKHPTEFFCKTLTASDT 168

Query: 125 STHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 184
           STHGGFSVPRRAAEK+FP LD++ QPP QEL+ RDLH+  W FRHI+RGQPKRHLLTTGW
Sbjct: 169 STHGGFSVPRRAAEKLFPPLDYTAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTTGW 228

Query: 185 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHA 244
           S+FV +KRL AGDSVLFI +EK+QL++G+RRA R  T +PSSVLS+DSMHIG+LAAAAHA
Sbjct: 229 SLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAAAAHA 288

Query: 245 AATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTI 304
            A  + F +F+NPRA P+EFVIPL KY KA+  +++SVGMRF M+FETE+S  RRYMGTI
Sbjct: 289 TANRTPFLIFYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGKRRYMGTI 348

Query: 305 TGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRP 364
            GISDLDP+RW  S WR+++V WDE    ++  RVS W+IE   +  ++PSL    LKR 
Sbjct: 349 VGISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIETPESLFIFPSLTS-GLKRQ 407

Query: 365 WHPS 368
            HPS
Sbjct: 408 LHPS 411



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 53/95 (55%), Positives = 71/95 (74%)

Query: 679 RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 738
           RT+ KV K+GSVGRS+D++ F  Y EL+  +  MFG+EG    P  SGW+LV+VD E+DV
Sbjct: 794 RTYTKVQKTGSVGRSIDVTSFKDYKELKSAIECMFGLEGLLTQPQSSGWKLVYVDYESDV 853

Query: 739 LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVE 773
           LL+GDDPWE FV  V  I+ILSP +VQ+M E+G++
Sbjct: 854 LLVGDDPWEEFVGCVRCIRILSPTEVQQMSEEGMK 888


>gi|357520645|ref|XP_003630611.1| Auxin response factor [Medicago truncatula]
 gi|355524633|gb|AET05087.1| Auxin response factor [Medicago truncatula]
          Length = 1096

 Score =  478 bits (1231), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 241/342 (70%), Positives = 287/342 (83%), Gaps = 2/342 (0%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           +NSELW ACAGPLV+LP  GT VVYFPQGHSEQVAA+  K+ D  +PNY NLP +L C L
Sbjct: 28  VNSELWQACAGPLVNLPLPGTHVVYFPQGHSEQVAASLKKDGDVQVPNYSNLPSKLPCTL 87

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPT-NYFCKTLTASDTST 126
           H++T+HAD +TDEVYA+MTLQP+S  +  D  +  ++ + S +P   +FCK LTASDTST
Sbjct: 88  HSLTLHADSDTDEVYARMTLQPVSSFDM-DAILRSDISLKSNKPQPEFFCKQLTASDTST 146

Query: 127 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 186
           HGGFSVPRRAAEK+FP LDFS QPPAQEL+A+DLH   WKFRHI+RGQPKRHLLTTGWS+
Sbjct: 147 HGGFSVPRRAAEKIFPPLDFSAQPPAQELVAKDLHGNVWKFRHIYRGQPKRHLLTTGWSL 206

Query: 187 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 246
           F+S KRL+AGDSVLFI +EK QLLLGIRRA R PT + SSVLSSDSMHIG+LAAAAHA+A
Sbjct: 207 FISGKRLLAGDSVLFIRDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHASA 266

Query: 247 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 306
            NS FTVF+NPRASPSEFVIPL KY +AV+  ++S GMRFRM+FETE+S  RRYMGT+ G
Sbjct: 267 NNSPFTVFYNPRASPSEFVIPLAKYYRAVYSHQISPGMRFRMMFETEDSGTRRYMGTVIG 326

Query: 307 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 348
           +SDLD VRW NS WR+++VGWDE+TAGER+ RVS+WEIEP+T
Sbjct: 327 VSDLDSVRWKNSQWRNLQVGWDEATAGERRSRVSIWEIEPVT 368



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 59/98 (60%), Positives = 76/98 (77%)

Query: 674  QLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVD 733
            Q    RT+ KVYK G+VGRS+DI+R+S Y+EL+ +L + FGIEG+ ED  R GW+LV+VD
Sbjct: 979  QFQRIRTYTKVYKRGAVGRSIDITRYSGYDELKHDLARRFGIEGQLEDRQRVGWKLVYVD 1038

Query: 734  RENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 771
             ENDVLL+GDDPWE FV+ V  IKILSP++VQ+M   G
Sbjct: 1039 HENDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDG 1076


>gi|295844332|gb|ADG43163.1| auxin response factor 29 [Zea mays]
          Length = 945

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 237/345 (68%), Positives = 273/345 (79%), Gaps = 5/345 (1%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G  K +NSELWHACAGPLV LP  G+ V YFPQGHSEQVAATT K  +S IPNYP+LPPQ
Sbjct: 31  GAKKVINSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKIPNSRIPNYPSLPPQ 90

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELG--IPSKQPTNYFCKTLT 120
           L+CQ+HN+T+HAD ETDE+Y QMTLQPL  E   D F    LG    SK PT YFCK LT
Sbjct: 91  LLCQVHNITLHADKETDEIYCQMTLQPLHSE--TDVFPIPTLGAYTKSKHPTEYFCKNLT 148

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
           ASDTSTHGGFSVPRRAAEK+FP LD+S+QPP QELI RDLHD  W FRHI+RGQPKRHLL
Sbjct: 149 ASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLL 208

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 240
           TTGWS+FV AKRL AGDSVLFI +EK+QLL+G+RRA R    + SSVLS+DSMHIG+LAA
Sbjct: 209 TTGWSLFVGAKRLKAGDSVLFIRDEKSQLLVGVRRATRQQPALSSSVLSTDSMHIGVLAA 268

Query: 241 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 300
           AAHAA++   FT+++NPR SPS FVIPL +Y KA +  + SVGMRF M+FETEESS RR 
Sbjct: 269 AAHAASSGGSFTIYYNPRTSPSPFVIPLARYNKATY-LQPSVGMRFAMMFETEESSKRRC 327

Query: 301 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 345
            G I GISD DP+RW NS WR+++V WDE   GER  RVS+W+IE
Sbjct: 328 TGAIVGISDYDPMRWPNSKWRNLQVEWDEHGYGERPERVSIWDIE 372



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 73/165 (44%), Positives = 97/165 (58%), Gaps = 8/165 (4%)

Query: 616 GVHIDSSGLLLPTTVSSFTTSVDPGVSSM----PLGDSGFHNSMYG---CMQDSSELLHN 668
            +HI+SS    P    SF     P +S++    PL     H S  G   C  D++     
Sbjct: 771 AIHINSSSCSQPLATGSFDAGAFPKLSNIRECQPLPLQEIHTSSMGTPSCSMDAAAEYGT 830

Query: 669 VGQIDQLTP-TRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGW 727
                Q+ P  RT+ KV K GSVGR +D++RF  Y+ELR  +  MFG++GK E P  S W
Sbjct: 831 DRSAKQMKPPVRTYTKVQKLGSVGRCIDVTRFRDYHELRSAIACMFGLQGKLEHPGSSDW 890

Query: 728 QLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGV 772
           +LV+VD ENDVLL+GDDPWE F++ V  I+ILSP +VQ+M E GV
Sbjct: 891 KLVYVDYENDVLLVGDDPWEEFINCVRCIRILSPSEVQQMSENGV 935


>gi|242077548|ref|XP_002448710.1| hypothetical protein SORBIDRAFT_06g031900 [Sorghum bicolor]
 gi|241939893|gb|EES13038.1| hypothetical protein SORBIDRAFT_06g031900 [Sorghum bicolor]
          Length = 946

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 245/368 (66%), Positives = 283/368 (76%), Gaps = 8/368 (2%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G  K +NSELWHACAGPLV LP  G+ V YFPQGHSEQVAATT K  +S IPNYP+LP Q
Sbjct: 31  GAKKVINSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKIPNSRIPNYPSLPSQ 90

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELG--IPSKQPTNYFCKTLT 120
           L+CQ+HN+T+HAD ETDE+YAQMTLQP+  E   D F    LG    SK PT YFCK LT
Sbjct: 91  LLCQVHNITLHADKETDEIYAQMTLQPVHSE--TDVFPIPSLGAYTKSKHPTEYFCKNLT 148

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
           ASDTSTHGGFSVPRRAAEK+FP LD+S+QPP QELI RDLHD  W FRHI+RGQPKRHLL
Sbjct: 149 ASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLL 208

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 240
           TTGWS+FV AKRL AGDSVLFI +EK+QLL+G+RRA R    + SSVLS+DSMHIG+LAA
Sbjct: 209 TTGWSLFVGAKRLKAGDSVLFIRDEKSQLLVGVRRATRQQPALSSSVLSTDSMHIGVLAA 268

Query: 241 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 300
           AAHAA++   FT+++NPR SPS FVIPL +Y KA +  + SVGMRF M+FETEES  RR 
Sbjct: 269 AAHAASSGGSFTIYYNPRTSPSPFVIPLARYNKATY-LQPSVGMRFAMMFETEESIKRRC 327

Query: 301 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLR 360
            GTI GISD DP+RW NS WR+++V WDE   GER  RVSLW+IE      ++PS  PL 
Sbjct: 328 TGTIVGISDYDPMRWPNSKWRNLQVEWDEHGYGERPERVSLWDIETPENM-VFPS--PLN 384

Query: 361 LKRPWHPS 368
            KR   PS
Sbjct: 385 SKRQCLPS 392



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 74/179 (41%), Positives = 105/179 (58%), Gaps = 16/179 (8%)

Query: 608 DSQNSVVFGVHIDS----SGLLLPTTVSSFTTSVDPGVSSM------PLGDSGFHNSMYG 657
           +SQ++ + G+H+++    S    P    SF       +S+M      PL +   HN   G
Sbjct: 760 ESQSASLSGLHMEAIHINSSCSQPLATGSFDAGTFSKLSNMKECQALPLQE--IHNGSMG 817

Query: 658 ---CMQDSSELLHNVGQIDQLTP-TRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMF 713
              C  D++        +  + P  RT+ KV K GSVGRS+D++RF  Y+ELR  +  MF
Sbjct: 818 TPSCSMDAAAEYSMDRSVKPMKPPVRTYTKVQKLGSVGRSIDVTRFRDYHELRSAIACMF 877

Query: 714 GIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGV 772
           G++GK E P  S W+LV+VD ENDVLL+GDDPWE F++ V  I+ILSP +VQ+M E GV
Sbjct: 878 GLQGKLEHPGGSDWKLVYVDYENDVLLVGDDPWEEFINCVRCIRILSPSEVQQMSENGV 936


>gi|414584938|tpg|DAA35509.1| TPA: auxin response factor 4 [Zea mays]
          Length = 936

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 265/464 (57%), Positives = 314/464 (67%), Gaps = 32/464 (6%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G  K +NSELWHACAGPLV LP  G+ V YFPQGHSEQVAATT K  +S IPNYP+LP Q
Sbjct: 32  GAKKVINSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKIPNSRIPNYPSLPSQ 91

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELG--IPSKQPTNYFCKTLT 120
           L+CQ+HN+T+HAD ETDE+YAQMTLQP+  E   D F    LG    SK P+ YFCK LT
Sbjct: 92  LLCQVHNITLHADKETDEIYAQMTLQPVHSE--TDVFPIPTLGAYTKSKHPSEYFCKNLT 149

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
           ASDTSTHGGFSVPRRAAEK+FP LD+S+QPP QELI RDLHD  W FRHI+RGQPKRHLL
Sbjct: 150 ASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLL 209

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 240
           TTGWS+FV AKRL AGDSVLFI +EK+QLL+G+RRA R    + SSVLS+DSMHIG+LAA
Sbjct: 210 TTGWSLFVGAKRLKAGDSVLFIRDEKSQLLVGVRRATRQQPALSSSVLSTDSMHIGVLAA 269

Query: 241 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 300
           AAHAA++   FTV++NPR SPS FVIPL +Y  A +  + SVGMRF M+FETEESS RR 
Sbjct: 270 AAHAASSGGSFTVYYNPRTSPSPFVIPLARYNMATY-LQPSVGMRFAMMFETEESSKRRC 328

Query: 301 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLR 360
            GTI GISD +P+RW NS WR+++V WDE   GER  RVSLW+IE      ++ S  PL 
Sbjct: 329 TGTIVGISDYEPMRWPNSKWRNLQVEWDEHGYGERPERVSLWDIETPENM-VFSS--PLN 385

Query: 361 LKRPWHPS-------TSSFNDNRDETASGLNWLRGGTGEQGLTTLN--FQSLGMFPWMQQ 411
            KR   PS        SS +  +      L  + G + +  L  LN   Q+LG     QQ
Sbjct: 386 SKRQCLPSYGVSGLHVSSISKPQGSPFGNLQHMPGISSDIALLLLNQSAQNLGSSIACQQ 445

Query: 412 RVEPSFLGNDH---------------NQQYQAMLAAGMQSGDPV 440
               S + N                 N+  Q + A G+Q GD V
Sbjct: 446 SSFSSIIQNAKQSYFPPTTLGASTGWNESQQQLNALGIQKGDQV 489



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 75/180 (41%), Positives = 111/180 (61%), Gaps = 17/180 (9%)

Query: 608 DSQNSVVFGVHIDS----SGLLLPTTVSSFTTSVDPGVS------SMPLGDSGFHNSMYG 657
           +SQ++ + G+H+++    S  L P    SF       +S      ++PL +   HNS  G
Sbjct: 749 ESQSASLSGLHMEAVHINSSCLQPLATGSFDAGTFSKLSNIKECQALPLQE--IHNSSMG 806

Query: 658 ---CMQDSSELLHNVGQ-IDQLTP-TRTFVKVYKSGSVGRSLDISRFSSYNELREELGQM 712
              C  D++ + + + + +  L P  RT+ KV K GSVGRS+D++RF  Y+ELR  +  M
Sbjct: 807 TPSCSMDAAAVEYCMDRSVKPLKPPVRTYTKVQKLGSVGRSIDVTRFRDYHELRSAIACM 866

Query: 713 FGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGV 772
           FG++GK E P  S W+LV+VD ENDVLL+GDDPWE F++ V  I+IL+P +VQ+M E GV
Sbjct: 867 FGLQGKLEHPGSSDWKLVYVDYENDVLLVGDDPWEEFINCVRCIRILAPSEVQQMSENGV 926


>gi|295844282|gb|ADG43138.1| auxin response factor 4 [Zea mays]
          Length = 935

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 265/464 (57%), Positives = 314/464 (67%), Gaps = 32/464 (6%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G  K +NSELWHACAGPLV LP  G+ V YFPQGHSEQVAATT K  +S IPNYP+LP Q
Sbjct: 31  GAKKVINSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKIPNSRIPNYPSLPSQ 90

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELG--IPSKQPTNYFCKTLT 120
           L+CQ+HN+T+HAD ETDE+YAQMTLQP+  E   D F    LG    SK P+ YFCK LT
Sbjct: 91  LLCQVHNITLHADKETDEIYAQMTLQPVHSE--TDVFPIPTLGAYTKSKHPSEYFCKNLT 148

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
           ASDTSTHGGFSVPRRAAEK+FP LD+S+QPP QELI RDLHD  W FRHI+RGQPKRHLL
Sbjct: 149 ASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLL 208

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 240
           TTGWS+FV AKRL AGDSVLFI +EK+QLL+G+RRA R    + SSVLS+DSMHIG+LAA
Sbjct: 209 TTGWSLFVGAKRLKAGDSVLFIRDEKSQLLVGVRRATRQQPALSSSVLSTDSMHIGVLAA 268

Query: 241 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 300
           AAHAA++   FTV++NPR SPS FVIPL +Y  A +  + SVGMRF M+FETEESS RR 
Sbjct: 269 AAHAASSGGSFTVYYNPRTSPSPFVIPLARYNMATY-LQPSVGMRFAMMFETEESSKRRC 327

Query: 301 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLR 360
            GTI GISD +P+RW NS WR+++V WDE   GER  RVSLW+IE      ++ S  PL 
Sbjct: 328 TGTIVGISDYEPMRWPNSKWRNLQVEWDEHGYGERPERVSLWDIETPENM-VFSS--PLN 384

Query: 361 LKRPWHPS-------TSSFNDNRDETASGLNWLRGGTGEQGLTTLN--FQSLGMFPWMQQ 411
            KR   PS        SS +  +      L  + G + +  L  LN   Q+LG     QQ
Sbjct: 385 SKRQCLPSYGVSGLHVSSISKPQGSPFGNLQHMPGISSDIALLLLNQSAQNLGSSIACQQ 444

Query: 412 RVEPSFLGNDH---------------NQQYQAMLAAGMQSGDPV 440
               S + N                 N+  Q + A G+Q GD V
Sbjct: 445 SSFSSIIQNAKQSYFPPTTLGASTGWNESQQQLNALGIQKGDQV 488



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 75/180 (41%), Positives = 111/180 (61%), Gaps = 17/180 (9%)

Query: 608 DSQNSVVFGVHIDS----SGLLLPTTVSSFTTSVDPGVS------SMPLGDSGFHNSMYG 657
           +SQ++ + G+H+++    S  L P    SF       +S      ++PL +   HNS  G
Sbjct: 748 ESQSASLSGLHMEAVHINSSCLQPLATGSFDAGTFSKLSNIKECQALPLQE--IHNSSMG 805

Query: 658 ---CMQDSSELLHNVGQ-IDQLTP-TRTFVKVYKSGSVGRSLDISRFSSYNELREELGQM 712
              C  D++ + + + + +  L P  RT+ KV K GSVGRS+D++RF  Y+ELR  +  M
Sbjct: 806 TPSCSMDAAAVEYCMDRSVKPLKPPVRTYTKVQKLGSVGRSIDVTRFRDYHELRSAIACM 865

Query: 713 FGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGV 772
           FG++GK E P  S W+LV+VD ENDVLL+GDDPWE F++ V  I+IL+P +VQ+M E GV
Sbjct: 866 FGLQGKLEHPGSSDWKLVYVDYENDVLLVGDDPWEEFINCVRCIRILAPSEVQQMSENGV 925


>gi|379323202|gb|AFD01300.1| auxin response factor 5-2 [Brassica rapa subsp. pekinensis]
          Length = 836

 Score =  474 bits (1219), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 232/363 (63%), Positives = 285/363 (78%), Gaps = 5/363 (1%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           +NS LWHACAGPLV LP VG+ V YF QGHSEQVA +T +   + +PNYPNLP QL+CQ+
Sbjct: 39  INSMLWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQV 98

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGI--PSKQPTNYFCKTLTASDTS 125
           HNVT+HAD ++DE+YAQM+LQP+  E  +D     +LG+   SK P+ YFCKTLTASDTS
Sbjct: 99  HNVTLHADKDSDEIYAQMSLQPVHSE--RDVLPVPDLGLLRGSKHPSEYFCKTLTASDTS 156

Query: 126 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 185
           THGGFSVPRRAAEK+FP LD++ QPP QEL+ RDLH+  W FRHI+RGQPKRHLLTTGWS
Sbjct: 157 THGGFSVPRRAAEKLFPPLDYTAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTTGWS 216

Query: 186 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 245
           +FV +KRL AGDSVLFI +EK+QL++G+RRA R  T +PSSVLS+DSMHIG+LAAAAHA 
Sbjct: 217 LFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAAAAHAT 276

Query: 246 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 305
           A  + F +FFNPRA P+EFVIPL KY KA+  +++SVGMRF M+FETE+S  RRYMGTI 
Sbjct: 277 ANRTPFLIFFNPRACPAEFVIPLPKYRKAICGSQLSVGMRFGMMFETEDSGKRRYMGTIV 336

Query: 306 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPW 365
           GISDLDP+RW  S WR+++V WDE    ++  RVS W+IE   +  ++PSL    LKR  
Sbjct: 337 GISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIETPESLFIFPSLTS-GLKRQL 395

Query: 366 HPS 368
           HPS
Sbjct: 396 HPS 398



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 53/96 (55%), Positives = 71/96 (73%)

Query: 678 TRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 737
            RT+ KV K+GSVGRS+D++ F  Y EL+  +  MFG+EG    P  SGW+LV+VD E+D
Sbjct: 729 VRTYTKVQKTGSVGRSIDVTSFRDYEELKTAIECMFGLEGLLTRPKTSGWKLVYVDYESD 788

Query: 738 VLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVE 773
           VLL+GDDPWE FV  V  I+ILSP +VQ+M E+G++
Sbjct: 789 VLLVGDDPWEEFVGCVRCIRILSPTEVQQMSEEGMK 824


>gi|8954059|gb|AAF82232.1|AC069143_8 Contains similarity to a non-phototropic hypocotyl 4 (NPH4) protein
           from Arabidopsis thaliana gb|AF186466 [Arabidopsis
           thaliana]
          Length = 1062

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 250/411 (60%), Positives = 302/411 (73%), Gaps = 33/411 (8%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ K +NS+LWHACAGPLVSLP VG+ VVYFPQGHSEQVAA+  K+ D  IPNYPNLP +
Sbjct: 15  GEKKPINSQLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKQTD-FIPNYPNLPSK 73

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           LIC LH+VT+HAD ETDEVYAQMTLQP++                ++QPT +FCKTLTAS
Sbjct: 74  LICLLHSVTLHADTETDEVYAQMTLQPVNKL--------------NRQPTEFFCKTLTAS 119

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSVPRRAAEK+FP LDFS+QPPAQE++A+DLHD  W FRHI+RG         
Sbjct: 120 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRG--------- 170

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
            WSVFVS KRL AGDSVLF+ +EK+QL+LGIRRA R    + SSV+SSDSMHIG+LAAAA
Sbjct: 171 -WSVFVSTKRLFAGDSVLFVRDEKSQLMLGIRRANRQTPTLSSSVISSDSMHIGILAAAA 229

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 302
           HA A +S FT+FFNPRASPSEFV+PL KY KA++  +VS+GMRFRM+FETE+  VRRYMG
Sbjct: 230 HANANSSPFTIFFNPRASPSEFVVPLAKYNKALY-AQVSLGMRFRMMFETEDCGVRRYMG 288

Query: 303 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 362
           T+TGISDLDPVRW  S WR+++VGWDESTAG+R  RVS+WEIEP+ T P Y  + P    
Sbjct: 289 TVTGISDLDPVRWKGSQWRNLQVGWDESTAGDRPSRVSIWEIEPVIT-PFY--ICPPPFF 345

Query: 363 RPWHPSTSSFNDNRDETASGLN----WLRGGTGEQGLTTLNFQSLGMFPWM 409
           RP +P      D+  +  +       W+    G +   +  F  L +  WM
Sbjct: 346 RPKYPRQPGMPDDELDMENAFKRAMPWMGEDFGMKDAQSSMFPGLSLVQWM 396



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 70/144 (48%), Positives = 96/144 (66%), Gaps = 6/144 (4%)

Query: 640  GVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQI--DQLTPTRTFVKVYKSGSVGRSLDIS 697
            G+ S+P    G  N + G + DS   + N G +  +Q    RT+ KV K GSVGRS+D++
Sbjct: 897  GIPSIPF-KPGCSNEV-GGINDSG--IMNGGGLWPNQTQRMRTYTKVQKRGSVGRSIDVT 952

Query: 698  RFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIK 757
            R+S Y+ELR +L +MFGIEG+ EDPL S W+LV+ D END+LL+GDDPWE FV+ V  IK
Sbjct: 953  RYSGYDELRHDLARMFGIEGQLEDPLTSDWKLVYTDHENDILLVGDDPWEEFVNCVQNIK 1012

Query: 758  ILSPEDVQKMGEQGVESFSPSSGQ 781
            ILS  +VQ+M   G  +  P++ Q
Sbjct: 1013 ILSSVEVQQMSLDGDLAAIPTTNQ 1036


>gi|293334075|ref|NP_001169359.1| auxin response factor 4 [Zea mays]
 gi|224028907|gb|ACN33529.1| unknown [Zea mays]
 gi|407232690|gb|AFT82687.1| ARF4 transcription factor, partial [Zea mays subsp. mays]
          Length = 936

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 264/464 (56%), Positives = 313/464 (67%), Gaps = 32/464 (6%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G  K +NSELWHACAGPLV LP  G+ V YFPQGHSEQVAATT K  +S IPNYP+LP Q
Sbjct: 32  GAKKVINSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKIPNSRIPNYPSLPSQ 91

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELG--IPSKQPTNYFCKTLT 120
           L+CQ+HN+T+HAD ETDE+YAQMTLQP+  E   D F    LG    SK  + YFCK LT
Sbjct: 92  LLCQVHNITLHADKETDEIYAQMTLQPVHSE--TDVFPIPTLGAYTKSKHSSEYFCKNLT 149

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
           ASDTSTHGGFSVPRRAAEK+FP LD+S+QPP QELI RDLHD  W FRHI+RGQPKRHLL
Sbjct: 150 ASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLL 209

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 240
           TTGWS+FV AKRL AGDSVLFI +EK+QLL+G+RRA R    + SSVLS+DSMHIG+LAA
Sbjct: 210 TTGWSLFVGAKRLKAGDSVLFIRDEKSQLLVGVRRATRQQPALSSSVLSTDSMHIGVLAA 269

Query: 241 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 300
           AAHAA++   FTV++NPR SPS FVIPL +Y  A +  + SVGMRF M+FETEESS RR 
Sbjct: 270 AAHAASSGGSFTVYYNPRTSPSPFVIPLARYNTATY-LQPSVGMRFAMMFETEESSKRRC 328

Query: 301 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLR 360
            GTI GISD +P+RW NS WR+++V WDE   GER  RVSLW+IE      ++ S  PL 
Sbjct: 329 TGTIVGISDYEPMRWPNSKWRNLQVEWDEHGYGERPERVSLWDIETPENM-VFSS--PLN 385

Query: 361 LKRPWHPS-------TSSFNDNRDETASGLNWLRGGTGEQGLTTLN--FQSLGMFPWMQQ 411
            KR   PS        SS +  +      L  + G + +  L  LN   Q+LG     QQ
Sbjct: 386 SKRQCLPSYGVSGLHVSSISKPQGSPFGNLQHMPGISSDIALLLLNQSAQNLGSSIACQQ 445

Query: 412 RVEPSFLGNDH---------------NQQYQAMLAAGMQSGDPV 440
               S + N                 N+  Q + A G+Q GD V
Sbjct: 446 SSFSSIIQNAKQSYFPPTTLGASTGWNESQQQLNALGIQKGDQV 489



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 75/180 (41%), Positives = 111/180 (61%), Gaps = 17/180 (9%)

Query: 608 DSQNSVVFGVHIDS----SGLLLPTTVSSFTTSVDPGVS------SMPLGDSGFHNSMYG 657
           +SQ++ + G+H+++    S  L P    SF       +S      ++PL +   HNS  G
Sbjct: 749 ESQSASLSGLHMEAVHINSSCLQPLATGSFDAGTFSKLSNIKECQALPLQE--IHNSSMG 806

Query: 658 ---CMQDSSELLHNVGQ-IDQLTP-TRTFVKVYKSGSVGRSLDISRFSSYNELREELGQM 712
              C  D++ + + + + +  L P  RT+ KV K GSVGRS+D++RF  Y+ELR  +  M
Sbjct: 807 TPSCSMDAAAVEYCMDRSVKPLKPPVRTYTKVQKLGSVGRSIDVTRFRDYHELRSAIACM 866

Query: 713 FGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGV 772
           FG++GK E P  S W+LV+VD ENDVLL+GDDPWE F++ V  I+IL+P +VQ+M E GV
Sbjct: 867 FGLQGKLEHPGSSDWKLVYVDYENDVLLVGDDPWEEFINCVRCIRILAPSEVQQMSENGV 926


>gi|449470376|ref|XP_004152893.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101205542 [Cucumis sativus]
          Length = 1107

 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 250/366 (68%), Positives = 288/366 (78%), Gaps = 4/366 (1%)

Query: 4   DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQL 63
           + K +N ELW ACAGPLV+LP  G  VVYFPQGHSEQVAA+  K+VD  +  Y       
Sbjct: 23  EKKIINPELWQACAGPLVNLPPAGYHVVYFPQGHSEQVAASLRKDVDGQVTIYLYHYYFA 82

Query: 64  ICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPT-NYFCKTLTAS 122
             +L ++ + AD ETDEVYAQMTL P+ P   KD  +  +L + S +P   +FCKTLTAS
Sbjct: 83  FLKLCSLYLXADPETDEVYAQMTLLPV-PSFDKDALLRSDLALKSNKPQPEFFCKTLTAS 141

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSVPRRAAEK+FP LDFS+QPPAQEL+A+DLHD  W FRHI+RGQPKRHLLTT
Sbjct: 142 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVAKDLHDNVWTFRHIYRGQPKRHLLTT 201

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWS+FVS KRL+AGDSVLFI +EK QLLLGIRRA R PT + SSVLSSDSMHIG+LAAAA
Sbjct: 202 GWSLFVSGKRLLAGDSVLFIRDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAA 261

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 302
           HAAA NS FTVF+NPRASPSEFVIPL KY KAV   ++S+GMRFRM+FETEES  RRYMG
Sbjct: 262 HAAANNSPFTVFYNPRASPSEFVIPLAKYYKAVSANQISLGMRFRMMFETEESGTRRYMG 321

Query: 303 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSLFPLRL 361
           TITGISDLDPVRW  S WR+++VGWDEST GER+ RVS+WEIEP+   F + P  F LR 
Sbjct: 322 TITGISDLDPVRWKGSQWRNLQVGWDESTGGERRNRVSVWEIEPVIAPFFICPPPF-LRS 380

Query: 362 KRPWHP 367
           KRP  P
Sbjct: 381 KRPRQP 386



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 56/93 (60%), Positives = 76/93 (81%)

Query: 679  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 738
            RT+ KVYK G+VGRS+DI+R+S Y+EL+++L + FGIEG+ ED  + GW+LV+VD ENDV
Sbjct: 995  RTYTKVYKRGAVGRSIDIARYSGYDELKQDLARRFGIEGQLEDRQKIGWKLVYVDHENDV 1054

Query: 739  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 771
            LL+GDDPW+ FV+ V  IKILSP++VQ+M   G
Sbjct: 1055 LLVGDDPWDDFVNCVRSIKILSPQEVQQMSLDG 1087


>gi|413919844|gb|AFW59776.1| hypothetical protein ZEAMMB73_806966 [Zea mays]
          Length = 958

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 237/358 (66%), Positives = 273/358 (76%), Gaps = 18/358 (5%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G  K +NSELWHACAGPLV LP  G+ V YFPQGHSEQVAATT K  +S IPNYP+LPPQ
Sbjct: 31  GAKKVINSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKIPNSRIPNYPSLPPQ 90

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELG--IPSKQPTNYFCKTLT 120
           L+CQ+HN+T+HAD ETDE+Y QMTLQPL  E   D F    LG    SK PT YFCK LT
Sbjct: 91  LLCQVHNITLHADKETDEIYCQMTLQPLHSE--TDVFPIPTLGAYTKSKHPTEYFCKNLT 148

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSL-------------DFSLQPPAQELIARDLHDVEWKF 167
           ASDTSTHGGFSVPRRAAEK+FP L             D+S+QPP QELI RDLHD  W F
Sbjct: 149 ASDTSTHGGFSVPRRAAEKLFPQLVRASAQTRVFNPQDYSMQPPNQELIVRDLHDNMWTF 208

Query: 168 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSV 227
           RHI+RGQPKRHLLTTGWS+FV AKRL AGDSVLFI +EK+QLL+G+RRA R    + SSV
Sbjct: 209 RHIYRGQPKRHLLTTGWSLFVGAKRLKAGDSVLFIRDEKSQLLVGVRRATRQQPALSSSV 268

Query: 228 LSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFR 287
           LS+DSMHIG+LAAAAHAA++   FT+++NPR SPS FVIPL +Y KA +  + SVGMRF 
Sbjct: 269 LSTDSMHIGVLAAAAHAASSGGSFTIYYNPRTSPSPFVIPLARYNKATY-LQPSVGMRFA 327

Query: 288 MLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 345
           M+FETEESS RR  G I GISD DP+RW NS WR+++V WDE   GER  RVS+W+IE
Sbjct: 328 MMFETEESSKRRCTGAIVGISDYDPMRWPNSKWRNLQVEWDEHGYGERPERVSIWDIE 385



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 73/165 (44%), Positives = 97/165 (58%), Gaps = 8/165 (4%)

Query: 616 GVHIDSSGLLLPTTVSSFTTSVDPGVSSM----PLGDSGFHNSMYG---CMQDSSELLHN 668
            +HI+SS    P    SF     P +S++    PL     H S  G   C  D++     
Sbjct: 784 AIHINSSSCSQPLATGSFDAGAFPKLSNIRECQPLPLQEIHTSSMGTPSCSMDAAAEYGT 843

Query: 669 VGQIDQLTP-TRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGW 727
                Q+ P  RT+ KV K GSVGR +D++RF  Y+ELR  +  MFG++GK E P  S W
Sbjct: 844 DRSAKQMKPPVRTYTKVQKLGSVGRCIDVTRFRDYHELRSAIACMFGLQGKLEHPGSSDW 903

Query: 728 QLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGV 772
           +LV+VD ENDVLL+GDDPWE F++ V  I+ILSP +VQ+M E GV
Sbjct: 904 KLVYVDYENDVLLVGDDPWEEFINCVRCIRILSPSEVQQMSENGV 948


>gi|326530666|dbj|BAK01131.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 955

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 233/347 (67%), Positives = 275/347 (79%), Gaps = 7/347 (2%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G  K +NSELWHACAGPLV LP  G+ V YFPQGHSEQVAATT K  +S IPNYP+LP Q
Sbjct: 36  GAKKVINSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKTPNSRIPNYPSLPSQ 95

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELG--IPSKQPTNYFCKTLT 120
           L+CQ+HN+TMHAD +TDEVYAQMTLQP++ E   D F    LG    SK P  YFCK LT
Sbjct: 96  LLCQVHNITMHADKDTDEVYAQMTLQPVNSE--TDVFPIQSLGSYAKSKHPAEYFCKNLT 153

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
           ASDTSTHGGFSVPRRAAEK+FP LD+S+QPP QELI RDLHD  W FRHI+RGQPKRHLL
Sbjct: 154 ASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLL 213

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 240
           TTGWS+FV AKRL AGDSVLFI +EK+QLL+G+RRA    T + SSVLS+DSMHIG+LAA
Sbjct: 214 TTGWSLFVGAKRLKAGDSVLFIRDEKSQLLVGVRRATNQQTALSSSVLSTDSMHIGVLAA 273

Query: 241 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 300
           AAHAA++ S FT+++NPR SPS FV+P+T+Y KA++  + SVGMR  M+ ETEES  RR+
Sbjct: 274 AAHAASSGSSFTIYYNPRTSPSPFVVPMTRYNKAIY-IQQSVGMRIAMMSETEESGKRRH 332

Query: 301 MGTITGISDLDPVRWSNSHWRSVKVGWDESTA--GERQPRVSLWEIE 345
            GTI G+SD DP+RW NS WR+++V WDE     GER  RVS+W+IE
Sbjct: 333 TGTIVGVSDSDPMRWPNSKWRNLQVEWDEHEHGYGERPERVSIWDIE 379



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 62/126 (49%), Positives = 83/126 (65%), Gaps = 3/126 (2%)

Query: 651 FHNSMYG---CMQDSSELLHNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELRE 707
            HNS  G   C  D++E   +        P RT+ KV K GSVGRS+D++R+  Y ELR 
Sbjct: 820 IHNSSRGTSSCSMDAAEYSIDRSAKPLKPPVRTYTKVQKLGSVGRSIDVTRYRDYRELRS 879

Query: 708 ELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
            +  MFG++GK E P  S W+LV+VD ENDVLL+GDDPWE F++ V  I+ILSP +VQ+M
Sbjct: 880 AIASMFGLQGKLEHPASSDWKLVYVDYENDVLLVGDDPWEEFINCVRCIRILSPSEVQQM 939

Query: 768 GEQGVE 773
            E G++
Sbjct: 940 SENGMQ 945


>gi|414584937|tpg|DAA35508.1| TPA: hypothetical protein ZEAMMB73_047841 [Zea mays]
          Length = 935

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 264/464 (56%), Positives = 313/464 (67%), Gaps = 33/464 (7%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G  K +NSELWHACAGPLV LP  G+ V YFPQGHSEQVAATT K  +S IPNYP+LP Q
Sbjct: 32  GAKKVINSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKIPNSRIPNYPSLPSQ 91

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELG--IPSKQPTNYFCKTLT 120
           L+CQ+HN+T+HAD ETDE+YAQMTLQP+  E   D F    LG    SK P+ YFCK LT
Sbjct: 92  LLCQVHNITLHADKETDEIYAQMTLQPVHSE--TDVFPIPTLGAYTKSKHPSEYFCKNLT 149

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
           ASDTSTHGGFSVPRRAAEK+FP LD+S+QPP QELI RDLHD  W FRHI+R QPKRHLL
Sbjct: 150 ASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYR-QPKRHLL 208

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 240
           TTGWS+FV AKRL AGDSVLFI +EK+QLL+G+RRA R    + SSVLS+DSMHIG+LAA
Sbjct: 209 TTGWSLFVGAKRLKAGDSVLFIRDEKSQLLVGVRRATRQQPALSSSVLSTDSMHIGVLAA 268

Query: 241 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 300
           AAHAA++   FTV++NPR SPS FVIPL +Y  A +  + SVGMRF M+FETEESS RR 
Sbjct: 269 AAHAASSGGSFTVYYNPRTSPSPFVIPLARYNMATY-LQPSVGMRFAMMFETEESSKRRC 327

Query: 301 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLR 360
            GTI GISD +P+RW NS WR+++V WDE   GER  RVSLW+IE      ++ S  PL 
Sbjct: 328 TGTIVGISDYEPMRWPNSKWRNLQVEWDEHGYGERPERVSLWDIETPENM-VFSS--PLN 384

Query: 361 LKRPWHPS-------TSSFNDNRDETASGLNWLRGGTGEQGLTTLN--FQSLGMFPWMQQ 411
            KR   PS        SS +  +      L  + G + +  L  LN   Q+LG     QQ
Sbjct: 385 SKRQCLPSYGVSGLHVSSISKPQGSPFGNLQHMPGISSDIALLLLNQSAQNLGSSIACQQ 444

Query: 412 RVEPSFLGNDH---------------NQQYQAMLAAGMQSGDPV 440
               S + N                 N+  Q + A G+Q GD V
Sbjct: 445 SSFSSIIQNAKQSYFPPTTLGASTGWNESQQQLNALGIQKGDQV 488



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 75/180 (41%), Positives = 111/180 (61%), Gaps = 17/180 (9%)

Query: 608 DSQNSVVFGVHIDS----SGLLLPTTVSSFTTSVDPGVS------SMPLGDSGFHNSMYG 657
           +SQ++ + G+H+++    S  L P    SF       +S      ++PL +   HNS  G
Sbjct: 748 ESQSASLSGLHMEAVHINSSCLQPLATGSFDAGTFSKLSNIKECQALPLQE--IHNSSMG 805

Query: 658 ---CMQDSSELLHNVGQ-IDQLTP-TRTFVKVYKSGSVGRSLDISRFSSYNELREELGQM 712
              C  D++ + + + + +  L P  RT+ KV K GSVGRS+D++RF  Y+ELR  +  M
Sbjct: 806 TPSCSMDAAAVEYCMDRSVKPLKPPVRTYTKVQKLGSVGRSIDVTRFRDYHELRSAIACM 865

Query: 713 FGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGV 772
           FG++GK E P  S W+LV+VD ENDVLL+GDDPWE F++ V  I+IL+P +VQ+M E GV
Sbjct: 866 FGLQGKLEHPGSSDWKLVYVDYENDVLLVGDDPWEEFINCVRCIRILAPSEVQQMSENGV 925


>gi|224085812|ref|XP_002307706.1| predicted protein [Populus trichocarpa]
 gi|222857155|gb|EEE94702.1| predicted protein [Populus trichocarpa]
          Length = 363

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 239/363 (65%), Positives = 283/363 (77%), Gaps = 18/363 (4%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G  K +NSELW+ACAGPLVSLP VG+ V YFPQGHSEQVA +T +   S IPNYPNLP Q
Sbjct: 12  GIRKAINSELWYACAGPLVSLPQVGSLVYYFPQGHSEQVAVSTRRSATSQIPNYPNLPSQ 71

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGI-PSKQPTNYFCKTLTA 121
           L+CQ+HNVT+HAD +TDE+YAQM+LQP++ E  KD F   + G+ PSK P+ +FCKTLTA
Sbjct: 72  LLCQVHNVTLHADKDTDEIYAQMSLQPVNTE--KDVFPIPDFGLRPSKHPSEFFCKTLTA 129

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAEK+FP LD+++QPP QEL+ RDLHD  W FRHI+RGQPKRHLLT
Sbjct: 130 SDTSTHGGFSVPRRAAEKLFPPLDYTMQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLT 189

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWS+FV +KRL AGDSVLFI +EK+QL++G+RRA R  T +PSSVLS+DSMHIG+LAAA
Sbjct: 190 TGWSLFVGSKRLKAGDSVLFIRDEKSQLMVGVRRANRQQTTLPSSVLSADSMHIGVLAAA 249

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           AHA A  S FT+F+NPRA PS+FVIPL K+ KAVF T+VSVGMRF M+FETEES  RRYM
Sbjct: 250 AHATANRSPFTIFYNPRACPSDFVIPLIKFRKAVFGTQVSVGMRFGMMFETEESGKRRYM 309

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRL 361
           GTI GISDL              V WDE    ++Q RVS WEIE   +  ++PSL    L
Sbjct: 310 GTIVGISDL--------------VEWDEPGCSDKQNRVSSWEIETPESLFIFPSLTS-GL 354

Query: 362 KRP 364
           KRP
Sbjct: 355 KRP 357


>gi|38346082|emb|CAE04850.2| OSJNBa0084K01.22 [Oryza sativa Japonica Group]
 gi|116309860|emb|CAH66895.1| OSIGBa0099L20.10 [Oryza sativa Indica Group]
          Length = 954

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 239/356 (67%), Positives = 278/356 (78%), Gaps = 8/356 (2%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G  K +NSELWHACAGPLV LP  G+ V YFPQGHSEQVAATT K  +S IPNYPNLP Q
Sbjct: 31  GAKKVINSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTRKIPNSRIPNYPNLPSQ 90

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELG--IPSKQPTNYFCKTLT 120
           L+CQ+HN+T+HAD +TDEVYAQMTLQP++ E   D F    LG    SK PT YFCK LT
Sbjct: 91  LLCQVHNITLHADKDTDEVYAQMTLQPVNSE--TDVFPIPTLGAYTKSKHPTEYFCKNLT 148

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
           ASDTSTHGGFSVPRRAAEK+FP LD+S+QPP QELI RDLHD  W FRHI+RGQPKRHLL
Sbjct: 149 ASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLL 208

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 240
           TTGWS+FV AKRL AGDSVLFI +EK+QLLLG+RRA R  T++ SSVLS+DSMHIG+LAA
Sbjct: 209 TTGWSLFVGAKRLKAGDSVLFIRDEKSQLLLGVRRATRQQTMLSSSVLSTDSMHIGVLAA 268

Query: 241 AAHAAATNSCFTVFFN-PRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRR 299
           AAHAA++   F   +N  R SPS FVIP+ +Y KA +  + SVGMRF M+FETEESS RR
Sbjct: 269 AAHAASSA--FGHSWNLHRTSPSPFVIPVARYNKATY-MQPSVGMRFAMMFETEESSKRR 325

Query: 300 YMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS 355
           Y GT+ GISD DP+RW NS WR+++V WDE   GER  RVS+W+IE      ++PS
Sbjct: 326 YTGTVVGISDYDPMRWPNSKWRNLQVEWDEHGYGERPERVSIWDIETPENTLVFPS 381



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 74/178 (41%), Positives = 106/178 (59%), Gaps = 14/178 (7%)

Query: 609 SQNSVVFGVHIDSSGLLLPTTVSS---FTTSVDPGV-SSMP-------LGDSGFHNSMYG 657
           SQ++ + G+H++S+   + TT  S    T   D G+ S +P       L     H +  G
Sbjct: 767 SQSANLSGLHMESTHRSINTTSCSQPMSTGGFDAGMYSKLPRLKESQILSLPEIHTNSMG 826

Query: 658 ---CMQDSSELLHNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFG 714
              C  D++E   +        P RT+ KV K GSVGRS+D++ F +Y+ELR  +  MFG
Sbjct: 827 TSACSMDATEYSLDRSAKPMKPPVRTYTKVQKQGSVGRSIDVTGFRNYHELRSAIACMFG 886

Query: 715 IEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGV 772
           ++GK E P  S W+LV+VD ENDVLL+GDDPWE F++ V  I+ILSP +VQ+M E G+
Sbjct: 887 LQGKLEHPGSSEWKLVYVDYENDVLLVGDDPWEEFINCVRCIRILSPSEVQQMSENGM 944


>gi|222622145|gb|EEE56277.1| hypothetical protein OsJ_05331 [Oryza sativa Japonica Group]
          Length = 1136

 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 276/490 (56%), Positives = 334/490 (68%), Gaps = 37/490 (7%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQV------AATTNKEVDSHIPNYPNLP 60
            +NSELWHACAGPLVSLP VG+ VVYFPQGHSEQV      AA+  K+VD+H+P+YPNLP
Sbjct: 40  AINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVYKSNIVAASMQKDVDAHVPSYPNLP 99

Query: 61  PQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQP-TNYFCKTL 119
            +LIC LH V +HAD +TDEVYAQMTLQP++    K+     EL +   +P   +FCKTL
Sbjct: 100 SKLICLLHGVNLHADPDTDEVYAQMTLQPVN-TYGKEALQISELALKQARPQMEFFCKTL 158

Query: 120 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 179
           TASDTSTHGGFSVPRRAAEK+FP LDFS+QPPAQEL ARD+HD  W FRHI+RGQPKRHL
Sbjct: 159 TASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDIHDNVWTFRHIYRGQPKRHL 218

Query: 180 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLA 239
           LTTGWS+FVS KRL AGDSV+ + +EK+QLLLGIRRA R PT + SSVLSSDSMHIG+LA
Sbjct: 219 LTTGWSLFVSGKRLFAGDSVIVVRDEKHQLLLGIRRANRQPTNISSSVLSSDSMHIGVLA 278

Query: 240 AAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRR 299
           AAAHAAA +S FT+F+NPRASP+EFVIP  KY KA++  ++S+GMRFRM+FETEE   RR
Sbjct: 279 AAAHAAANSSPFTIFYNPRASPTEFVIPFAKYQKALYSNQISLGMRFRMMFETEELGTRR 338

Query: 300 YMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSLFP 358
           YMGTITGISDLDP            VGWDES AGER+ RVS+WEIEP+   F + P  F 
Sbjct: 339 YMGTITGISDLDP------------VGWDESAAGERRNRVSIWEIEPVAAPFFLCPQPF- 385

Query: 359 LRLKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQS--LGMFPWMQ-QRVEP 415
             +KRP      S  +N  + A  + WL      +     N  +  L +  WM   R + 
Sbjct: 386 FGVKRPRQLDDESEMENLFKRA--MPWLGEEVCIKDTQNQNSTAPGLSLVQWMNMNRQQS 443

Query: 416 SFLGNDHNQQ--YQAMLAAGMQ---SGDPVRQQFMQLQQPFQYLQQSGSQ-NPLQLKQQQ 469
           S L N   Q    QA+    MQ   + +  RQ ++Q       LQQ+  Q N  +L QQ 
Sbjct: 444 SSLANTAAQSEYLQALGNPAMQNLAADELARQLYVQ----NNLLQQNCIQFNSPKLPQQM 499

Query: 470 HLLQQLNSQA 479
             +  L+  A
Sbjct: 500 QTMNDLSKAA 509



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 57/93 (61%), Positives = 72/93 (77%)

Query: 679  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 738
            RTF KVYK G+VGRS+DI R+S Y EL+  L +MFGIEG+ ED  R GW+LV+ D E+D+
Sbjct: 1003 RTFTKVYKRGAVGRSIDIGRYSGYEELKHALARMFGIEGQLEDRQRIGWKLVYKDHEDDI 1062

Query: 739  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 771
            LLLGDDPWE FV+ V  I+ILSP++VQ+M   G
Sbjct: 1063 LLLGDDPWEEFVNCVRCIRILSPQEVQQMSLDG 1095


>gi|449446636|ref|XP_004141077.1| PREDICTED: auxin response factor 19-like [Cucumis sativus]
          Length = 1092

 Score =  460 bits (1183), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 246/352 (69%), Positives = 287/352 (81%), Gaps = 10/352 (2%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ K +NSELWHACAGPLVSLP VG+ VVYFPQGHSEQVAA+ NKE D  IPNYPNLP +
Sbjct: 15  GERKNINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMNKETD-FIPNYPNLPSK 73

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP-SKQPTNYFCKTLTA 121
           LIC LHNVT+HAD ETDEVYAQMTLQP++  E K+  +  ++G+  S+QP  +FCKTLTA
Sbjct: 74  LICMLHNVTLHADPETDEVYAQMTLQPVNKYE-KEALLASDIGLKQSRQPAEFFCKTLTA 132

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAEK+FP L+ ++      LI+  +H        IF GQPKRHLLT
Sbjct: 133 SDTSTHGGFSVPRRAAEKIFPPLNMNMN--VVILISLQIHK---NVHCIFSGQPKRHLLT 187

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWSVFVS KRL AGDSVLFI +EK+QLLLGIRRA R    + SSV+SSDSMHIG+LA+A
Sbjct: 188 TGWSVFVSTKRLFAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVISSDSMHIGILASA 247

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           AHAAA NS FT+F+NPRASPSEFVIPL KY KA++ T+VS+GMRFRM+FETEES VRRYM
Sbjct: 248 AHAAANNSPFTIFYNPRASPSEFVIPLAKYNKAMY-TQVSLGMRFRMMFETEESGVRRYM 306

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMY 353
           GTITGISD+D VRW NS WR+++VGWDES AGER  RVS+WE+EP+ T P Y
Sbjct: 307 GTITGISDMDSVRWKNSQWRNLQVGWDESAAGERPNRVSIWEVEPVVT-PFY 357



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 55/93 (59%), Positives = 72/93 (77%)

Query: 679  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 738
            RT+ KV K GSVGR +D++R+  Y+ELR +L +MFGIEG+ EDP R+ W+LV+VD END+
Sbjct: 965  RTYTKVQKRGSVGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTDWKLVYVDHENDI 1024

Query: 739  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 771
            LL+GDDPW+ FVS V  IKILS  +VQ+M   G
Sbjct: 1025 LLVGDDPWDEFVSCVQSIKILSSAEVQQMSLDG 1057


>gi|147857971|emb|CAN80371.1| hypothetical protein VITISV_014723 [Vitis vinifera]
          Length = 1096

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 238/366 (65%), Positives = 278/366 (75%), Gaps = 31/366 (8%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ K +N ELW ACAGPLV+LP  GT VVYFPQGHSEQVAA+  K+VD+ IPNYPNLP +
Sbjct: 21  GEKKSINPELWQACAGPLVNLPPAGTLVVYFPQGHSEQVAASMKKDVDAQIPNYPNLPSR 80

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQP-TNYFCKTLTA 121
           L+C LHNVT+HAD ETDEVYAQMTLQP+ P   K++ +  +L + + +P T++FCKTLTA
Sbjct: 81  LLCILHNVTLHADPETDEVYAQMTLQPV-PAYDKESLLRSDLALKTNKPQTDFFCKTLTA 139

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAEK+FP LDFS+QPPAQEL+A+DLHD  W FRHI+RG+       
Sbjct: 140 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVAKDLHDNVWTFRHIYRGR------- 192

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
                                 +EK QLLLGIRRA R PT + SSVLSSDSMHIG+LAAA
Sbjct: 193 ----------------------DEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAA 230

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           AHAAA NS FTVF+NPRASPSEFVIPL KY KA +  ++S+GMRFRM+FETEES  RRYM
Sbjct: 231 AHAAANNSPFTVFYNPRASPSEFVIPLAKYYKAAYSNQISLGMRFRMMFETEESGTRRYM 290

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRL 361
           GTITGISDLDPVRW NS WR+++VGWDESTAGER+ RVS+WEIEP+T           R 
Sbjct: 291 GTITGISDLDPVRWKNSQWRNLQVGWDESTAGERRNRVSIWEIEPVTAPFFICPPPFFRS 350

Query: 362 KRPWHP 367
           KRP  P
Sbjct: 351 KRPRQP 356



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 57/91 (62%), Positives = 74/91 (81%)

Query: 681  FVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 740
            F KVYK G+VGRS+DI+R+S Y+EL+++L + FGIEG+ ED  R GW+LV+VD ENDVLL
Sbjct: 986  FAKVYKRGAVGRSIDITRYSGYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHENDVLL 1045

Query: 741  LGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 771
            +GDDPWE FV+ V  IKILSP++VQ+M   G
Sbjct: 1046 VGDDPWEEFVNCVRCIKILSPQEVQQMSLDG 1076


>gi|357152133|ref|XP_003576020.1| PREDICTED: auxin response factor 23-like [Brachypodium distachyon]
          Length = 882

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 305/841 (36%), Positives = 440/841 (52%), Gaps = 84/841 (9%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
            L SELW ACAGPLV++P VG +V YFPQGH EQV A+TN+  +  +  Y NLP +++C+
Sbjct: 66  ALFSELWSACAGPLVTVPKVGDKVFYFPQGHIEQVEASTNQVAEQRMQLY-NLPWKILCE 124

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPT----NYFCKTLTAS 122
           + NV + A+ +TDEVYAQ+TL P S +++++         PS  P     + FCKTLTAS
Sbjct: 125 VMNVELKAESDTDEVYAQLTLLPESKQQEENASTEEVSAAPSAAPVRPRVHSFCKTLTAS 184

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSV RR A++  P LD S QPP QEL A+DLH  EW+FRHIFRGQP+RHLL +
Sbjct: 185 DTSTHGGFSVLRRHADECLPPLDMSRQPPTQELTAKDLHGAEWRFRHIFRGQPRRHLLQS 244

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWSVFVSAKRLVAGD+ +F+  E  +L +G+RRA+R  T +PSSV+SS SMH+G+LA A 
Sbjct: 245 GWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISSHSMHLGVLATAW 304

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 302
           HA  T + FTV++ PR SP+EFV+P  +Y++++     S+GMRF+M FE EE+  +R+ G
Sbjct: 305 HAVNTGTMFTVYYKPRTSPAEFVVPYDRYMESL-KRNYSIGMRFKMRFEGEEAPEQRFTG 363

Query: 303 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 362
           TI G+ D DP  W+ S WRS+KV WDE+++  R  RVS W+IEP  + P    L   R K
Sbjct: 364 TIVGMGDSDPAGWAESKWRSLKVRWDEASSIPRPERVSPWQIEPAVSPPPINPLPVPRTK 423

Query: 363 RPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGNDH 422
           RP     +S  D+  +       +   T +  L    FQ+       Q+   P     D 
Sbjct: 424 RPRPNVIASTTDSSTQAKEVAPKVAAETQQHALQRA-FQT-------QENATPKTGFGDG 475

Query: 423 NQ----QYQAMLAAGMQ---SGDPVRQQ-----FMQLQQPFQYLQQ-SGSQNPLQLKQQQ 469
           ++    Q   +  +G +   +  P + +     +MQ+ +P  Y +  SG Q P  ++ QQ
Sbjct: 476 SELDTTQKSVLQPSGFEREKNNIPTQIKLGSNGWMQMSRPESYSEMLSGFQPPKDVQNQQ 535

Query: 470 HLLQQLNSQAEDRAQQQQQPQQHMYHDALQIRTDELLQRQQSNLPSPSFSKANFMDSSTE 529
                         +Q      + +H       D+  Q   S  P  S+S    M  +T 
Sbjct: 536 GF--------RSFPEQIAAGHSNFWHTVNAHYQDQ--QGSHSTFPG-SWS---LMPQNTG 581

Query: 530 ISVSIS--PMQNMLGSLPEGSGNLLNFSGAGPSMLRQQFPQQSLG--SKYEPSQVRDFVH 585
             ++    PM   +  LP+ + N    +G   ++  + F Q S G      PS   D   
Sbjct: 582 FGLNKQNYPMMQEVAGLPQRAANTKFGNGGYAALPGRGFDQYSTGWFGHMMPSSHMDDTQ 641

Query: 586 SMSLPSSYNGKDAAVGTENC-NTDSQNSVVFGVHIDS----------------------- 621
               P     +   VG  +   T   +  +FG+H+DS                       
Sbjct: 642 ----PRVIKPQPLVVGHGDMQKTKGASCKLFGIHLDSPAKSEPLKSPPSVAYDGMPHTPG 697

Query: 622 SGLLLPTTVSSFTTSVDPGVSSMPLGDSGFHNSM----YGCMQDSSELLHNVGQIDQLTP 677
           S  L     +      DP  +  PL D+ + +S+      C Q S     N     +   
Sbjct: 698 SAELCRMDATEPEKCYDPSKTPKPL-DAPYADSVPEKHLSCQQAS----RNASGKSRGGS 752

Query: 678 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
            R+  KV+K G ++GRS+D+++F+ Y EL  EL  MF   G  +   +  W +V+ D E 
Sbjct: 753 ARSCKKVHKQGIALGRSVDLTKFNGYMELVSELDDMFDFNGDLKSSNKE-WMVVYTDHEG 811

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANSRGNCGRDPVGS 796
           D++L+GDDPW  F + V  I I + E+VQ+M    + S S  S   +  RG+  R+  G 
Sbjct: 812 DMMLVGDDPWSEFCNIVHKIFIYTREEVQRMAPGALNSRSEESPANSMERGSAAREVRGC 871

Query: 797 L 797
           L
Sbjct: 872 L 872


>gi|379323204|gb|AFD01301.1| auxin response factor 5-3 [Brassica rapa subsp. pekinensis]
          Length = 470

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 222/363 (61%), Positives = 276/363 (76%), Gaps = 14/363 (3%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           +NSELWHACAGPLV LP VG+ V YF QGHSEQVA +T +   + +PNYPNLP QL+CQ+
Sbjct: 45  INSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQV 104

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGI--PSKQPTNYFCKTLTASDTS 125
           HNVT+HAD ++DE+YAQM+LQP+  E  +D F   + G+   SK P  +FCKTLTASDTS
Sbjct: 105 HNVTLHADKDSDEIYAQMSLQPVHSE--RDVFPVPDFGLLNRSKHPAEFFCKTLTASDTS 162

Query: 126 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 185
           THGGFSVPRRAAEK+FP LD++ QPP QEL+ RDLH+  W FRHI+RGQPKRHLLTTGWS
Sbjct: 163 THGGFSVPRRAAEKLFPPLDYTAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTTGWS 222

Query: 186 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 245
           +FV +KRL AGDSVLFI +EK+QL++G+RRA R  T +PSSVLS+DSMHIG+LAAAAHA 
Sbjct: 223 LFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAAAAHAT 282

Query: 246 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 305
           A  + F +F+NPRA P+EFVIPL KY KA+   ++S GMRF M+FETE+S  R       
Sbjct: 283 ANRTPFLIFYNPRACPAEFVIPLAKYRKAICGAQLSAGMRFGMMFETEDSGKR------- 335

Query: 306 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPW 365
             SD+DP+RWS S WR+++V WDE    ++  RVS W+IE   +  ++PSL    LKR  
Sbjct: 336 --SDMDPLRWSGSKWRNLQVEWDEPGCNDKPTRVSPWDIETPESLFIFPSLTS-GLKRQL 392

Query: 366 HPS 368
           HPS
Sbjct: 393 HPS 395



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 32/57 (56%), Positives = 43/57 (75%)

Query: 717 GKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVE 773
           G    P  SGW+LV+VD E+DVLL+GDDPWE FV  V  I+ILSP +V++M E+G++
Sbjct: 398 GLLTRPQSSGWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPTEVEQMSEEGMK 454


>gi|302756411|ref|XP_002961629.1| hypothetical protein SELMODRAFT_437944 [Selaginella moellendorffii]
 gi|300170288|gb|EFJ36889.1| hypothetical protein SELMODRAFT_437944 [Selaginella moellendorffii]
          Length = 795

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 221/346 (63%), Positives = 269/346 (77%), Gaps = 3/346 (0%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+   L+SE+WHACAGPLV LP VG RVVYFPQGH EQVAA+TN+  D  +P+Y NLP Q
Sbjct: 28  GNTNALDSEVWHACAGPLVCLPRVGDRVVYFPQGHIEQVAASTNQSADMQMPHY-NLPSQ 86

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           + C+L N+T+ AD ETDEV+AQMTL P + +  +      EL    K+  + FCK LT+S
Sbjct: 87  IYCRLLNLTLGADRETDEVFAQMTLVPENEQGDQSIDTEDELSPCPKRKLSMFCKNLTSS 146

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSVPRRAAE+  P LD+   PPAQEL+A+DLH VEWKFRHI+RGQP+RHLLTT
Sbjct: 147 DTSTHGGFSVPRRAAEECLPPLDYQQSPPAQELVAKDLHGVEWKFRHIYRGQPRRHLLTT 206

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPP-TVMPSSVLSSDSMHIGLLAAA 241
           GWSVFVS K+LVAGD+VLF+  +  +L +G+RRA+R   +V  SS+LSS SMH+G+LAAA
Sbjct: 207 GWSVFVSQKKLVAGDAVLFLRGDNGELRIGVRRAVRQQNSVTSSSLLSSHSMHLGVLAAA 266

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           AHA +T + FT+F+NPRASP+EFV+P  KYVKA  H  +SVGMRF+M FETEESS RRYM
Sbjct: 267 AHAVSTKTMFTIFYNPRASPAEFVVPYHKYVKAFTHN-LSVGMRFKMRFETEESSERRYM 325

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 347
           GTITG+ D+D  RW NS WR ++VGWDE TA ERQ RVS WEIEP 
Sbjct: 326 GTITGVGDIDSDRWINSKWRCLQVGWDEQTANERQERVSPWEIEPF 371



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 50/107 (46%), Positives = 73/107 (68%), Gaps = 7/107 (6%)

Query: 679 RTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 737
           RT  KV+  G+ VGR++D+S+FS Y+EL  EL Q+FG++   +DP  SGWQ+V+ D E D
Sbjct: 663 RTCTKVHLQGAAVGRAVDLSKFSCYSELLLELQQLFGLDNALDDP-DSGWQVVYTDNEGD 721

Query: 738 VLLLGDDPWEAFVSNVWYIKILSPEDVQK-----MGEQGVESFSPSS 779
           +LL+GDDPW+ F + V  I+ILSP +V+K     +G+  V    PS+
Sbjct: 722 MLLVGDDPWQEFCNMVRNIRILSPAEVEKLTQGALGKSAVVEEEPST 768


>gi|224062027|ref|XP_002300718.1| predicted protein [Populus trichocarpa]
 gi|222842444|gb|EEE79991.1| predicted protein [Populus trichocarpa]
          Length = 316

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 215/307 (70%), Positives = 254/307 (82%), Gaps = 3/307 (0%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G  K +NSELW+ACAGPLVSLP VG+ V YFPQGHSEQVA +T +   S IPNYPNLP Q
Sbjct: 12  GTRKAINSELWYACAGPLVSLPQVGSLVYYFPQGHSEQVAVSTKRSATSQIPNYPNLPSQ 71

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGI-PSKQPTNYFCKTLTA 121
           L+CQ+HNVT+HAD +TDE++AQM+LQP++ E  KD F   + G+ PSK P+ +FCK LTA
Sbjct: 72  LLCQVHNVTLHADKDTDEIHAQMSLQPVNSE--KDVFPVPDFGLKPSKHPSEFFCKALTA 129

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAEK+FP LD+S+QPP+QEL+ RDLHD  W FRHI+RGQPKRHLLT
Sbjct: 130 SDTSTHGGFSVPRRAAEKLFPPLDYSMQPPSQELVVRDLHDNTWTFRHIYRGQPKRHLLT 189

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWS+FV +KRL AGDSVLFI NEK+ L++G+R A R  T +PSSVLS+DSMHIG+LAAA
Sbjct: 190 TGWSLFVGSKRLKAGDSVLFIRNEKSHLMVGVRHANRQQTTLPSSVLSADSMHIGVLAAA 249

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           AHAA   S FT+F+NPRA PS+FVIPL K+ K VF T+VSVGMRF M+FETEES  RRYM
Sbjct: 250 AHAAGNRSPFTIFYNPRACPSDFVIPLIKFRKTVFGTQVSVGMRFGMMFETEESGKRRYM 309

Query: 302 GTITGIS 308
           GTI GIS
Sbjct: 310 GTIVGIS 316


>gi|302762557|ref|XP_002964700.1| hypothetical protein SELMODRAFT_438973 [Selaginella moellendorffii]
 gi|300166933|gb|EFJ33538.1| hypothetical protein SELMODRAFT_438973 [Selaginella moellendorffii]
          Length = 396

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 221/346 (63%), Positives = 269/346 (77%), Gaps = 3/346 (0%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+   L+SE+WHACAGPLV LP VG RVVYFPQGH EQVAA+TN+  D  +P+Y NLP Q
Sbjct: 28  GNTNALDSEVWHACAGPLVCLPRVGDRVVYFPQGHIEQVAASTNQSADMQMPHY-NLPSQ 86

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           + C+L N+T+ AD ETDEV+AQMTL P + +  +      EL    K+  + FCK LT+S
Sbjct: 87  IYCRLLNLTLGADRETDEVFAQMTLVPENEQGDQSIDTEDELSPCPKRKLSMFCKNLTSS 146

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSVPRRAAE+  P LD+   PPAQEL+A+DLH VEWKFRHI+RGQP+RHLLTT
Sbjct: 147 DTSTHGGFSVPRRAAEECLPPLDYQQSPPAQELVAKDLHGVEWKFRHIYRGQPRRHLLTT 206

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPP-TVMPSSVLSSDSMHIGLLAAA 241
           GWSVFVS K+LVAGD+VLF+  +  +L +G+RRA+R   +V  SS+LSS SMH+G+LAAA
Sbjct: 207 GWSVFVSQKKLVAGDAVLFLRGDNGELRIGVRRAVRQQNSVTSSSLLSSHSMHLGVLAAA 266

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           AHA +T + FT+F+NPRASP+EFV+P  KYVKA  H  +SVGMRF+M FETEESS RRYM
Sbjct: 267 AHAVSTKTMFTIFYNPRASPAEFVVPYHKYVKAFTHN-LSVGMRFKMRFETEESSERRYM 325

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 347
           GTITG+ D+D  RW NS WR ++VGWDE TA ERQ RVS WEIEP 
Sbjct: 326 GTITGVGDIDSDRWINSKWRCLQVGWDEQTANERQERVSPWEIEPF 371


>gi|125550116|gb|EAY95938.1| hypothetical protein OsI_17805 [Oryza sativa Indica Group]
 gi|125591966|gb|EAZ32316.1| hypothetical protein OsJ_16524 [Oryza sativa Japonica Group]
          Length = 926

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 224/355 (63%), Positives = 259/355 (72%), Gaps = 34/355 (9%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G  K +NSELWHACAGPLV LP  G+ V YFPQGHSEQVAATT K  +S IPNYPNLP Q
Sbjct: 31  GAKKVINSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTRKIPNSRIPNYPNLPSQ 90

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELG--IPSKQPTNYFCKTLT 120
           L+CQ+HN+T+HAD +TDEVYAQMTLQP++ E   D F    LG    SK PT YFCK LT
Sbjct: 91  LLCQVHNITLHADKDTDEVYAQMTLQPVNSE--TDVFPIPTLGAYTKSKHPTEYFCKNLT 148

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
           ASDTSTHGGFSVPRRAAEK+FP LD+S+QPP QELI RDLHD  W FRHI+RGQPKRHLL
Sbjct: 149 ASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLL 208

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 240
           TTGWS+FV AKRL AGDSVLFI                             SMHIG+LAA
Sbjct: 209 TTGWSLFVGAKRLKAGDSVLFI-----------------------------SMHIGVLAA 239

Query: 241 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 300
           AAHAA++ S FT+++NPR SPS FVIP+ +Y KA +  + SVGMRF M+FETEESS RRY
Sbjct: 240 AAHAASSGSSFTIYYNPRTSPSPFVIPVARYNKATY-MQPSVGMRFAMMFETEESSKRRY 298

Query: 301 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS 355
            GT+ GISD DP+RW NS WR+++V WDE   GER  RVS+W+IE      ++PS
Sbjct: 299 TGTVVGISDYDPMRWPNSKWRNLQVEWDEHGYGERPERVSIWDIETPENTLVFPS 353



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 74/178 (41%), Positives = 106/178 (59%), Gaps = 14/178 (7%)

Query: 609 SQNSVVFGVHIDSSGLLLPTTVSS---FTTSVDPGV-SSMP-------LGDSGFHNSMYG 657
           SQ++ + G+H++S+   + TT  S    T   D G+ S +P       L     H +  G
Sbjct: 739 SQSANLSGLHMESTHRSINTTSCSQPMSTGGFDAGMYSKLPRLKESQILSLPEIHTNSMG 798

Query: 658 ---CMQDSSELLHNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFG 714
              C  D++E   +        P RT+ KV K GSVGRS+D++ F +Y+ELR  +  MFG
Sbjct: 799 TSACSMDATEYSLDRSAKPMKPPVRTYTKVQKQGSVGRSIDVTGFRNYHELRSAIACMFG 858

Query: 715 IEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGV 772
           ++GK E P  S W+LV+VD ENDVLL+GDDPWE F++ V  I+ILSP +VQ+M E G+
Sbjct: 859 LQGKLEHPGSSEWKLVYVDYENDVLLVGDDPWEEFINCVRCIRILSPSEVQQMSENGM 916


>gi|413916383|gb|AFW56315.1| hypothetical protein ZEAMMB73_567315 [Zea mays]
          Length = 826

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 302/801 (37%), Positives = 422/801 (52%), Gaps = 108/801 (13%)

Query: 11  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 70
           ELW ACAGPL S+P +G +V YFPQGH EQV A+TN   +       NLP ++ C+L N+
Sbjct: 31  ELWKACAGPLSSVPLLGEKVYYFPQGHIEQVEASTNHLAEHQGTPLYNLPWKIPCKLMNM 90

Query: 71  TMHADVETDEVYAQMTLQPLSPEEQKDT-----FVPIELGIPSKQPT-------NYFCKT 118
            + A+ +TDEVYAQ+TL P   +++  +         E  +P   P        + FCKT
Sbjct: 91  ELKAEPDTDEVYAQLTLLPDKKQDENTSARVENEEAEEEVVPHVPPATSEGLRIHSFCKT 150

Query: 119 LTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRH 178
           LTASDTSTHGGFSV RR A++  P LD S  PP QEL+A+DLH VEW+FRHIFRGQP+RH
Sbjct: 151 LTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGVEWRFRHIFRGQPRRH 210

Query: 179 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLL 238
           LL +GWSVFVSAKRLVAGD+ +F+  E  +L +G+RRA+R  T +PSSV+SS SMH+G+L
Sbjct: 211 LLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHSMHLGVL 270

Query: 239 AAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVR 298
           A A HA  T S FTV++ PR SP+EFV+   +Y +++     S+GMRFRM FE EE++ +
Sbjct: 271 ATAWHAVNTGSMFTVYYKPRTSPAEFVVSRARYCESL-KRNYSIGMRFRMRFEGEEAAEQ 329

Query: 299 RYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYPSLF 357
           R+ GTI GI   DP  W++S WRS+KV WDE+++  R  RVS W+IEP ++  P+ P   
Sbjct: 330 RFTGTIVGICVSDPSGWADSKWRSLKVRWDEASSVPRPERVSPWQIEPAVSPSPVNP--L 387

Query: 358 PLRLKRPWHPSTSSFND----NRDETASGL------NWLRGGTGEQGLTTL--------- 398
           P+R KR      +S +D    NR E AS +      N L      QG T L         
Sbjct: 388 PVRFKRSRSSVNASPSDVSTVNR-EVASKVMVESQQNNLPRALHNQGRTQLTGRYRDSTD 446

Query: 399 --NFQSLGMFP--WMQQRVEPSFLGNDHNQQYQAMLAAGMQSGDPVRQQFMQLQQPFQYL 454
               Q L M+     QQR       N+   Q +  L    QS  P  + + QL   FQ L
Sbjct: 447 VKTAQDLTMWSSGTEQQR-------NNIAAQTKRCLEGWTQSRTP--EGYNQLFSAFQPL 497

Query: 455 QQSGSQNPLQ-LKQQQHLLQQLNSQAEDRAQQQQQPQQHMYHDALQI--RTDELLQRQQS 511
           +   + NPL+    +    +       D     QQ   +M H  L     +      QQ+
Sbjct: 498 KD--AHNPLRPFPNKISGTRSSTWVTADARYPAQQANHNMLHGTLSFMPHSSGFRMIQQN 555

Query: 512 NLPSPSFSKANFMDSSTEIS----VSISPMQNMLGSLPEGSGNLLNFSGAGPSMLRQQFP 567
           NL +P    ANF   S   S    V+        GS+   S    +   A  S++R Q  
Sbjct: 556 NLVTP--EAANFTGKSAFTSLQGHVTDQCSTGWFGSIESNS----HTDHASSSLIRSQ-- 607

Query: 568 QQSLGSKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLP 627
                                           +G +   T   +  +FG+ + S     P
Sbjct: 608 -----------------------------PLVIGNDVQKTKGTSFKLFGIPLGSPEKSEP 638

Query: 628 TTVSSFTTSVDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKS 687
             VS  + + D  + + P  ++          +  SE   N+    Q + TR+  KV+K 
Sbjct: 639 -LVSPPSVAYDGKLQTSPTDNN----------EPCSEATQNIQNKVQSSSTRSCKKVHKQ 687

Query: 688 GS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPW 746
           GS +GRS+D+++F+ Y+EL  EL QMF  +G+ + P R+ W +V+ D E D++L+GDDPW
Sbjct: 688 GSALGRSIDLTKFACYDELIAELDQMFDFDGELKSPCRN-WLVVYTDNEGDMMLVGDDPW 746

Query: 747 EAFVSNVWYIKILSPEDVQKM 767
             F   V  I I + E+V++M
Sbjct: 747 NEFCDMVHKIFIYTREEVERM 767


>gi|293337297|ref|NP_001169329.1| uncharacterized protein LOC100383196 [Zea mays]
 gi|224028731|gb|ACN33441.1| unknown [Zea mays]
 gi|407232688|gb|AFT82686.1| ARF28 ARF type transcription factor, partial [Zea mays subsp. mays]
 gi|413916381|gb|AFW56313.1| hypothetical protein ZEAMMB73_567315 [Zea mays]
 gi|413916382|gb|AFW56314.1| hypothetical protein ZEAMMB73_567315 [Zea mays]
          Length = 813

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 302/801 (37%), Positives = 422/801 (52%), Gaps = 108/801 (13%)

Query: 11  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 70
           ELW ACAGPL S+P +G +V YFPQGH EQV A+TN   +       NLP ++ C+L N+
Sbjct: 31  ELWKACAGPLSSVPLLGEKVYYFPQGHIEQVEASTNHLAEHQGTPLYNLPWKIPCKLMNM 90

Query: 71  TMHADVETDEVYAQMTLQPLSPEEQKDT-----FVPIELGIPSKQPT-------NYFCKT 118
            + A+ +TDEVYAQ+TL P   +++  +         E  +P   P        + FCKT
Sbjct: 91  ELKAEPDTDEVYAQLTLLPDKKQDENTSARVENEEAEEEVVPHVPPATSEGLRIHSFCKT 150

Query: 119 LTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRH 178
           LTASDTSTHGGFSV RR A++  P LD S  PP QEL+A+DLH VEW+FRHIFRGQP+RH
Sbjct: 151 LTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGVEWRFRHIFRGQPRRH 210

Query: 179 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLL 238
           LL +GWSVFVSAKRLVAGD+ +F+  E  +L +G+RRA+R  T +PSSV+SS SMH+G+L
Sbjct: 211 LLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHSMHLGVL 270

Query: 239 AAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVR 298
           A A HA  T S FTV++ PR SP+EFV+   +Y +++     S+GMRFRM FE EE++ +
Sbjct: 271 ATAWHAVNTGSMFTVYYKPRTSPAEFVVSRARYCESL-KRNYSIGMRFRMRFEGEEAAEQ 329

Query: 299 RYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYPSLF 357
           R+ GTI GI   DP  W++S WRS+KV WDE+++  R  RVS W+IEP ++  P+ P   
Sbjct: 330 RFTGTIVGICVSDPSGWADSKWRSLKVRWDEASSVPRPERVSPWQIEPAVSPSPVNP--L 387

Query: 358 PLRLKRPWHPSTSSFND----NRDETASGL------NWLRGGTGEQGLTTL--------- 398
           P+R KR      +S +D    NR E AS +      N L      QG T L         
Sbjct: 388 PVRFKRSRSSVNASPSDVSTVNR-EVASKVMVESQQNNLPRALHNQGRTQLTGRYRDSTD 446

Query: 399 --NFQSLGMFP--WMQQRVEPSFLGNDHNQQYQAMLAAGMQSGDPVRQQFMQLQQPFQYL 454
               Q L M+     QQR       N+   Q +  L    QS  P  + + QL   FQ L
Sbjct: 447 VKTAQDLTMWSSGTEQQR-------NNIAAQTKRCLEGWTQSRTP--EGYNQLFSAFQPL 497

Query: 455 QQSGSQNPLQ-LKQQQHLLQQLNSQAEDRAQQQQQPQQHMYHDALQI--RTDELLQRQQS 511
           +   + NPL+    +    +       D     QQ   +M H  L     +      QQ+
Sbjct: 498 KD--AHNPLRPFPNKISGTRSSTWVTADARYPAQQANHNMLHGTLSFMPHSSGFRMIQQN 555

Query: 512 NLPSPSFSKANFMDSSTEIS----VSISPMQNMLGSLPEGSGNLLNFSGAGPSMLRQQFP 567
           NL +P    ANF   S   S    V+        GS+   S    +   A  S++R Q  
Sbjct: 556 NLVTP--EAANFTGKSAFTSLQGHVTDQCSTGWFGSIESNS----HTDHASSSLIRSQ-- 607

Query: 568 QQSLGSKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLP 627
                                           +G +   T   +  +FG+ + S     P
Sbjct: 608 -----------------------------PLVIGNDVQKTKGTSFKLFGIPLGSPEKSEP 638

Query: 628 TTVSSFTTSVDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKS 687
             VS  + + D  + + P  ++          +  SE   N+    Q + TR+  KV+K 
Sbjct: 639 -LVSPPSVAYDGKLQTSPTDNN----------EPCSEATQNIQNKVQSSSTRSCKKVHKQ 687

Query: 688 GS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPW 746
           GS +GRS+D+++F+ Y+EL  EL QMF  +G+ + P R+ W +V+ D E D++L+GDDPW
Sbjct: 688 GSALGRSIDLTKFACYDELIAELDQMFDFDGELKSPCRN-WLVVYTDNEGDMMLVGDDPW 746

Query: 747 EAFVSNVWYIKILSPEDVQKM 767
             F   V  I I + E+V++M
Sbjct: 747 NEFCDMVHKIFIYTREEVERM 767


>gi|295844330|gb|ADG43162.1| auxin response factor 28 [Zea mays]
          Length = 813

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 302/801 (37%), Positives = 422/801 (52%), Gaps = 108/801 (13%)

Query: 11  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 70
           ELW ACAGPL S+P +G +V YFPQGH EQV A+TN   +       NLP ++ C+L N+
Sbjct: 31  ELWKACAGPLSSVPLLGEKVYYFPQGHIEQVEASTNHLAEHQGTPLYNLPWKIPCKLMNM 90

Query: 71  TMHADVETDEVYAQMTLQPLSPEEQKDT-----FVPIELGIPSKQPT-------NYFCKT 118
            + A+ +TDEVYAQ+TL P   +++  +         E  +P   P        + FCKT
Sbjct: 91  ELKAEPDTDEVYAQLTLLPDKKQDENTSARVENEEAEEEVVPHVPPATSEGLRIHSFCKT 150

Query: 119 LTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRH 178
           LTASDTSTHGGFSV RR A++  P LD S  PP QEL+A+DLH VEW+FRHIFRGQP+RH
Sbjct: 151 LTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAQDLHGVEWRFRHIFRGQPRRH 210

Query: 179 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLL 238
           LL +GWSVFVSAKRLVAGD+ +F+  E  +L +G+RRA+R  T +PSSV+SS SMH+G+L
Sbjct: 211 LLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHSMHLGVL 270

Query: 239 AAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVR 298
           A A HA  T S FTV++ PR SP+EFV+   +Y +++     S+GMRFRM FE EE++ +
Sbjct: 271 ATAWHAVNTGSMFTVYYKPRTSPAEFVVSRARYCESL-KRNYSIGMRFRMRFEGEEAAEQ 329

Query: 299 RYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYPSLF 357
           R+ GTI GI   DP  W++S WRS+KV WDE+++  R  RVS W+IEP ++  P+ P   
Sbjct: 330 RFTGTIVGICVSDPSGWADSKWRSLKVRWDEASSVPRPERVSPWQIEPAVSPSPVNP--L 387

Query: 358 PLRLKRPWHPSTSSFND----NRDETASGL------NWLRGGTGEQGLTTL--------- 398
           P+R KR      +S +D    NR E AS +      N L      QG T L         
Sbjct: 388 PVRFKRSRSSVNASPSDVSTVNR-EVASKVMVESQQNNLPRALHNQGRTQLTGRYRDSTD 446

Query: 399 --NFQSLGMFP--WMQQRVEPSFLGNDHNQQYQAMLAAGMQSGDPVRQQFMQLQQPFQYL 454
               Q L M+     QQR       N+   Q +  L    QS  P  + + QL   FQ L
Sbjct: 447 VKTAQDLTMWSSGTEQQR-------NNIAAQTKRCLEGWTQSRTP--EGYNQLFSAFQPL 497

Query: 455 QQSGSQNPLQ-LKQQQHLLQQLNSQAEDRAQQQQQPQQHMYHDALQI--RTDELLQRQQS 511
           +   + NPL+    +    +       D     QQ   +M H  L     +      QQ+
Sbjct: 498 KD--AHNPLRPFPNKISGTRSSTWVTADARYPAQQANHNMLHGTLSFMPHSSGFRMIQQN 555

Query: 512 NLPSPSFSKANFMDSSTEIS----VSISPMQNMLGSLPEGSGNLLNFSGAGPSMLRQQFP 567
           NL +P    ANF   S   S    V+        GS+   S    +   A  S++R Q  
Sbjct: 556 NLVTP--EAANFTGKSAFTSLQGHVTDQCSTGWFGSIESNS----HTDHASSSLIRSQ-- 607

Query: 568 QQSLGSKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLP 627
                                           +G +   T   +  +FG+ + S     P
Sbjct: 608 -----------------------------PLVIGNDVQKTKGTSFKLFGIPLGSPEKSEP 638

Query: 628 TTVSSFTTSVDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKS 687
             VS  + + D  + + P  ++          +  SE   N+    Q + TR+  KV+K 
Sbjct: 639 -LVSPPSVAYDGKLQTSPTDNN----------EPCSEATQNIQNKVQSSSTRSCKKVHKQ 687

Query: 688 GS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPW 746
           GS +GRS+D+++F+ Y+EL  EL QMF  +G+ + P R+ W +V+ D E D++L+GDDPW
Sbjct: 688 GSALGRSIDLTKFACYDELIAELDQMFDFDGELKSPCRN-WLVVYTDNEGDMMLVGDDPW 746

Query: 747 EAFVSNVWYIKILSPEDVQKM 767
             F   V  I I + E+V++M
Sbjct: 747 NEFCDMVHKIFIYTREEVERM 767


>gi|413934438|gb|AFW68989.1| hypothetical protein ZEAMMB73_088581 [Zea mays]
          Length = 739

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 225/299 (75%), Positives = 244/299 (81%), Gaps = 8/299 (2%)

Query: 156 IARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRR 215
           +A+DLH  EWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWN+ NQLLLGIRR
Sbjct: 1   MAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRR 60

Query: 216 AIRPPTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAV 275
           A RP TVMPSSVLSSDSMHIGLLAAAAHAA+TNS FT+F+NPRASPSEFVIPL KYVKAV
Sbjct: 61  ANRPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFTIFYNPRASPSEFVIPLVKYVKAV 120

Query: 276 FHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGER 335
           +HTR+SVGMRFRMLFETEESSVRRYMGTITGI DLD VRW NSHWRSVKVGWDESTAGER
Sbjct: 121 YHTRISVGMRFRMLFETEESSVRRYMGTITGICDLDSVRWPNSHWRSVKVGWDESTAGER 180

Query: 336 QPRVSLWEIEPLTTFPMYPSLFPLRLKRPWHPSTSSFNDNRDET-ASGLNWLRGGTGEQG 394
           QPRVSLWEIEPLTTFPMYPS FPLRLKRPW     S +  +D+  A+ L WLR  T   G
Sbjct: 181 QPRVSLWEIEPLTTFPMYPSPFPLRLKRPWPTGLPSLHGGKDDDLANSLMWLR-DTANPG 239

Query: 395 LTTLNFQSLGMFPWMQQRVEPSFLGNDHNQQYQAMLAAGMQSGDPVRQQ---FMQLQQP 450
             +LNF  LGM PWMQ R++ + LG   +  YQAM  A  Q  D  +Q     +Q QQP
Sbjct: 240 FQSLNFGGLGMSPWMQPRLDATLLGLQPD-MYQAMATAAFQ--DATKQASPTMLQFQQP 295


>gi|308081526|ref|NP_001183887.1| uncharacterized protein LOC100502480 [Zea mays]
 gi|238015272|gb|ACR38671.1| unknown [Zea mays]
          Length = 534

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 225/299 (75%), Positives = 244/299 (81%), Gaps = 8/299 (2%)

Query: 156 IARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRR 215
           +A+DLH  EWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWN+ NQLLLGIRR
Sbjct: 1   MAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRR 60

Query: 216 AIRPPTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAV 275
           A RP TVMPSSVLSSDSMHIGLLAAAAHAA+TNS FT+F+NPRASPSEFVIPL KYVKAV
Sbjct: 61  ANRPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFTIFYNPRASPSEFVIPLVKYVKAV 120

Query: 276 FHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGER 335
           +HTR+SVGMRFRMLFETEESSVRRYMGTITGI DLD VRW NSHWRSVKVGWDESTAGER
Sbjct: 121 YHTRISVGMRFRMLFETEESSVRRYMGTITGICDLDSVRWPNSHWRSVKVGWDESTAGER 180

Query: 336 QPRVSLWEIEPLTTFPMYPSLFPLRLKRPWHPSTSSFNDNR-DETASGLNWLRGGTGEQG 394
           QPRVSLWEIEPLTTFPMYPS FPLRLKRPW     S +  + D+ A+ L WLR  T   G
Sbjct: 181 QPRVSLWEIEPLTTFPMYPSPFPLRLKRPWPTGLPSLHGGKDDDLANSLMWLR-DTANPG 239

Query: 395 LTTLNFQSLGMFPWMQQRVEPSFLGNDHNQQYQAMLAAGMQSGDPVRQQ---FMQLQQP 450
             +LNF  LGM PWMQ R++ + LG   +  YQAM  A  Q  D  +Q     +Q QQP
Sbjct: 240 FQSLNFGGLGMSPWMQPRLDATLLGLQPD-MYQAMATAAFQ--DATKQASPTMLQFQQP 295


>gi|302820796|ref|XP_002992064.1| hypothetical protein SELMODRAFT_430287 [Selaginella moellendorffii]
 gi|300140186|gb|EFJ06913.1| hypothetical protein SELMODRAFT_430287 [Selaginella moellendorffii]
          Length = 781

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 222/366 (60%), Positives = 268/366 (73%), Gaps = 15/366 (4%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEV-DSHIPNYPNLPPQLICQ 66
           L+SE WHACAGPLV LP VG RVVYFPQGH EQV A+TN+   D  IP Y NLP Q+ C+
Sbjct: 72  LDSEAWHACAGPLVCLPLVGDRVVYFPQGHIEQVLASTNQNAADLQIPQY-NLPSQIFCR 130

Query: 67  LHNVTMHADVETDEVYAQMTLQP--------LSPEEQKDTFVPIELGIPSKQPTNYFCKT 118
           + N+++ A  ETDEVYAQMTL P        +S ++   +    E    SK   + FCK 
Sbjct: 131 VLNLSLGAYRETDEVYAQMTLVPENELFYIRISDQQLDQSLELDEPTASSKAKLSMFCKN 190

Query: 119 LTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRH 178
           LT+SDTSTHGGFSVPRRAAE+ FP LD+   PPAQE+IA+DLH +EWKFRHI+RGQP+RH
Sbjct: 191 LTSSDTSTHGGFSVPRRAAEECFPRLDYQQTPPAQEIIAKDLHGIEWKFRHIYRGQPRRH 250

Query: 179 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRP-PTVMPSSVLSSDSMHIGL 237
           LLTTGWSVFVS K+LVAGD+VLF+  +  +L +GIRRA+R   +V  SS+LSS SM IG+
Sbjct: 251 LLTTGWSVFVSQKKLVAGDTVLFVRGDNGELRIGIRRAVRTQSSVTSSSLLSSHSMQIGV 310

Query: 238 LAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSV 297
           LAAAAHA +T + FTVF+NPRASP+EFV+P  KYVK+ F   + +GMRF+M FETE+SS 
Sbjct: 311 LAAAAHAVSTKTMFTVFYNPRASPAEFVVPYHKYVKS-FKMNILIGMRFKMRFETEDSSE 369

Query: 298 RRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLF 357
           RRYMGTITGI D+DP RW  S WR +KVGWDE  A ERQ RVS WEIEP     + P   
Sbjct: 370 RRYMGTITGIGDIDPARWPGSKWRFLKVGWDEHAASERQERVSPWEIEPFIAPNVTP--- 426

Query: 358 PLRLKR 363
           P+  KR
Sbjct: 427 PVSTKR 432



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 53/122 (43%), Positives = 74/122 (60%), Gaps = 3/122 (2%)

Query: 677 PTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           P+RT  KV+K G+VGR+LD+S+F  Y +L EEL  +FGI+        S WQ V+VD E 
Sbjct: 663 PSRTCTKVHKHGAVGRALDLSKFRGYTQLLEELQHLFGIDESLNG---SEWQTVYVDNEG 719

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANSRGNCGRDPVGS 796
           D+LL+GDDPWE F + V  I+ILSP ++QK+  Q   S +     R + + +    P  S
Sbjct: 720 DMLLVGDDPWEEFCTTVRCIRILSPAEIQKLTVQARNSSTEEPSSRLSDQQDSSSPPATS 779

Query: 797 LE 798
            E
Sbjct: 780 DE 781


>gi|147770403|emb|CAN69277.1| hypothetical protein VITISV_023245 [Vitis vinifera]
          Length = 1183

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 242/412 (58%), Positives = 279/412 (67%), Gaps = 53/412 (12%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ K +NSELWHACAGPLVSLP VG+ VVYFPQGHSEQ                      
Sbjct: 85  GERKSINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQ---------------------- 122

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP-SKQPTNYFCKTLTA 121
                      AD ETDEVYAQMTLQP      K+  +  +LG+  S+QP  +FCKTLTA
Sbjct: 123 -----------ADAETDEVYAQMTLQPYD----KEALLASDLGLKQSRQPVEFFCKTLTA 167

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAEK+FP LDFS+QPPAQE++ARDLHD  W FRHI+RGQPKRHLLT
Sbjct: 168 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVARDLHDNTWTFRHIYRGQPKRHLLT 227

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWSVFVS KRL AGDSVLFI +EK+QLLLGIRRA R    + SSV+S DSMHIG+LAAA
Sbjct: 228 TGWSVFVSTKRLFAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVISCDSMHIGILAAA 287

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           AHAAA NS FT+F+NPRASPSEFVIPL KY KA++ T+VS+GMRFRM+FETEES VRRYM
Sbjct: 288 AHAAANNSPFTIFYNPRASPSEFVIPLAKYNKAMY-TQVSLGMRFRMMFETEESGVRRYM 346

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRL 361
           GTITGIS+L             K    + +AGER  RVS+WEIEP+ T P Y  L P   
Sbjct: 347 GTITGISELRCCAME-------KFTMAQPSAGERPSRVSIWEIEPVVT-PFY--LCPPPF 396

Query: 362 KRPWHPSTSSFNDNRDETAS----GLNWLRGGTGEQGLTTLNFQSLGMFPWM 409
            RP  P    F D+  +  S    G+ WL    G +   +  F  L +  WM
Sbjct: 397 FRPKFPKQPGFPDDESDIESAFKRGMPWLGDDFGMKDAPSSIFPGLNLVQWM 448



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 63/119 (52%), Positives = 82/119 (68%), Gaps = 4/119 (3%)

Query: 657  GCMQD----SSELLHNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQM 712
            GC  D     + +L N    +Q    RT+ KV K GSVGRS+D++R+  Y+ELR +L +M
Sbjct: 1030 GCSNDVAITETGVLSNGLWTNQAQRMRTYTKVQKRGSVGRSIDVTRYKGYDELRHDLARM 1089

Query: 713  FGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 771
            FGIEG+ EDP R+ W+LV+VD END+LL+GDDPWE FVS V  IKILS  +VQ+M   G
Sbjct: 1090 FGIEGQLEDPQRTDWKLVYVDHENDILLVGDDPWEEFVSCVQSIKILSSAEVQQMSLDG 1148


>gi|291196881|emb|CAX63133.1| ARF-L1 protein [Ginkgo biloba]
          Length = 958

 Score =  421 bits (1081), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 211/362 (58%), Positives = 265/362 (73%), Gaps = 9/362 (2%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYP-NLPPQLIC 65
           CL  ELWHACAGPL+SLP  G+ VVYFPQGH EQV  +   +        P +LPPQ+ C
Sbjct: 33  CL--ELWHACAGPLISLPRKGSLVVYFPQGHMEQVTTSLKHQCLEQRQMRPYDLPPQIFC 90

Query: 66  QLHNVTMHADVETDEVYAQMTLQPLSPE----EQKDTFVPIELGIPSKQPTNYFCKTLTA 121
           ++ NV +HAD ETDEVYAQ+TL P  PE    + ++     E G+ +K   + FCKTLTA
Sbjct: 91  RVLNVNLHADQETDEVYAQVTLVP-EPEPAEKDLEEEEEDEEAGVLNKSTPHMFCKTLTA 149

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAE  FP LD++ Q P+QEL+A+DLH VEW+FRHI+RGQP+RHLLT
Sbjct: 150 SDTSTHGGFSVPRRAAEDCFPPLDYNQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLT 209

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWSVFV+ K L++GD+VLF+  E  +L LGIRRA R  +V+PSSVLSS SMH+G+LA+A
Sbjct: 210 TGWSVFVNHKGLMSGDAVLFLRGENGELRLGIRRAARQQSVIPSSVLSSQSMHLGVLASA 269

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           A+A AT S F +F+NPRASP+EF+IP  KYVK+  +  +S+GMRF+M FETE+++ RRY 
Sbjct: 270 ANAVATKSMFHIFYNPRASPAEFLIPYHKYVKSC-NLPLSIGMRFKMRFETEDTAERRYT 328

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRL 361
           G ITGI D+DP +W  S WRS+ VGWDE  A E+Q RVS WEIEP  +          R+
Sbjct: 329 GIITGIGDVDPAKWPGSKWRSLMVGWDEHAANEQQERVSPWEIEPCISVAGLNVSSGTRI 388

Query: 362 KR 363
           KR
Sbjct: 389 KR 390



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 42/91 (46%), Positives = 63/91 (69%), Gaps = 2/91 (2%)

Query: 679 RTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 737
           R   KV+K G+ VGR++D+S+   Y+EL  EL ++F +EG   DP + GWQ+V+ D END
Sbjct: 830 RKCTKVHKQGNIVGRAVDLSKLDGYDELISELERLFNMEGLLNDPEK-GWQVVYTDNEND 888

Query: 738 VLLLGDDPWEAFVSNVWYIKILSPEDVQKMG 768
           ++L+GDDPW+ F + V  I I + E+V+KM 
Sbjct: 889 IMLVGDDPWQEFCNIVCKILIYTHEEVEKMA 919


>gi|302761368|ref|XP_002964106.1| hypothetical protein SELMODRAFT_166729 [Selaginella moellendorffii]
 gi|300167835|gb|EFJ34439.1| hypothetical protein SELMODRAFT_166729 [Selaginella moellendorffii]
          Length = 774

 Score =  421 bits (1081), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 224/362 (61%), Positives = 268/362 (74%), Gaps = 13/362 (3%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEV-DSHIPNYPNLPPQLICQ 66
           L+SE WHACAGPLV LP VG RVVYFPQGH EQV A+TN+   D  IP Y NLP Q+ C+
Sbjct: 72  LDSEAWHACAGPLVCLPLVGDRVVYFPQGHIEQVLASTNQNAADLQIPQY-NLPSQIFCR 130

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP---SKQPTNYFCKTLTASD 123
           + N+++ A  ETDEVYAQMTL P +  EQ D    +EL  P   SK   + F K LT+SD
Sbjct: 131 VLNLSLGAYRETDEVYAQMTLVPEN--EQLDQ--SLELDEPTASSKAKLSMFSKNLTSSD 186

Query: 124 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 183
           TSTHGGFSVPRRAAE+ FP LD+   PPAQE+IA+DLH VEWKFRHI+RGQP+RHLLTTG
Sbjct: 187 TSTHGGFSVPRRAAEECFPRLDYQQTPPAQEIIAKDLHGVEWKFRHIYRGQPRRHLLTTG 246

Query: 184 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRP-PTVMPSSVLSSDSMHIGLLAAAA 242
           WSVFVS K+LVAGD+VLF+  +  +L +GIRRA+R   +V  SS+LSS SM IG+LAAAA
Sbjct: 247 WSVFVSQKKLVAGDTVLFVRGDNGELRIGIRRAVRTQSSVTSSSLLSSHSMQIGVLAAAA 306

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVR--RY 300
           HA +T + FTVF+NPRASP+EFV+P  KYVK+ F   + +GMRF+M FETE+SS R  RY
Sbjct: 307 HAVSTKTMFTVFYNPRASPAEFVVPYHKYVKS-FKMNILIGMRFKMRFETEDSSERSVRY 365

Query: 301 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLR 360
           MGTITGI D+DP RW  S WR +KVGWDE  A ERQ RVS WEIEP     + P +   R
Sbjct: 366 MGTITGIGDIDPARWPGSKWRFLKVGWDEHAASERQERVSPWEIEPFIAPNVTPPVSTKR 425

Query: 361 LK 362
            +
Sbjct: 426 FR 427



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 54/122 (44%), Positives = 74/122 (60%), Gaps = 3/122 (2%)

Query: 677 PTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           P+RT  KV+K G+VGR+LD+S+F  Y +L EEL  +FGI+        S WQ V+VD E 
Sbjct: 656 PSRTCTKVHKHGAVGRALDLSKFRGYTQLLEELQHLFGIDESLNG---SEWQAVYVDNEG 712

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANSRGNCGRDPVGS 796
           D+LL+GDDPWE F S V  I+ILSP ++QK+  Q   S +     R + + +    P  S
Sbjct: 713 DMLLVGDDPWEEFCSTVRCIRILSPAEIQKLTVQARNSSTEEPSSRLSDQQDSSSPPATS 772

Query: 797 LE 798
            E
Sbjct: 773 DE 774


>gi|379323208|gb|AFD01303.1| auxin response factor 7-1 [Brassica rapa subsp. pekinensis]
          Length = 1474

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 220/360 (61%), Positives = 273/360 (75%), Gaps = 10/360 (2%)

Query: 55  NYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP-SKQPTN 113
           +YPNLP +LIC L NVT++AD ET+EVYAQMTLQP++ +  +D  +  ++G+  ++QP  
Sbjct: 350 SYPNLPSKLICMLQNVTLNADPETEEVYAQMTLQPVN-KYDRDALLASDMGLKINRQPNE 408

Query: 114 YFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRG 173
           +FCKTLTASDTSTHGGFSVPRRAAEK+FP+LDFS+QPP QEL+A+D+HD  W FRHIFRG
Sbjct: 409 FFCKTLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIFRG 468

Query: 174 QPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSM 233
           QPKRHLLTTGWSVFVS KRL AGDSVLF+ + K QLLLGIRRA R    + SSV+SSDSM
Sbjct: 469 QPKRHLLTTGWSVFVSTKRLFAGDSVLFVRDGKGQLLLGIRRANRQQPALSSSVISSDSM 528

Query: 234 HIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETE 293
           HIG+LAAAAHA A NS FT+F+NPRA+P+EFV+PL KY KA++  +VS+GMRFRM+FETE
Sbjct: 529 HIGVLAAAAHANANNSPFTIFYNPRAAPAEFVVPLAKYTKAMY-AQVSLGMRFRMIFETE 587

Query: 294 ESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMY 353
           E  VRRYMGT+TGISDLDPVRW NS WR++++GWDES AG+R  RVS+W+IEP+ T P Y
Sbjct: 588 ECGVRRYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVLT-PFY 646

Query: 354 PSLFPLRLKRPWHPSTSSFNDNRDETASGLN----WLRGGTGEQGLTTLNFQSLGMFPWM 409
             + P    RP         D+  +  S L     WL  G   +  ++  F  L +  WM
Sbjct: 647 --ICPPPFFRPRFAGQPGMPDDGTDMESALKRAMPWLDNGLEMKDPSSTIFPGLSLVQWM 704



 Score =  284 bits (727), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 188/394 (47%), Positives = 233/394 (59%), Gaps = 80/394 (20%)

Query: 1   MIGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLP 60
           M G+ + +NSELWHACAGPL+SLP  G+ VVYFPQGHSE                     
Sbjct: 14  MEGERRNINSELWHACAGPLISLPPAGSLVVYFPQGHSE--------------------- 52

Query: 61  PQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLT 120
                              +V A M       ++Q D F+P    +PSK        TL 
Sbjct: 53  -------------------QVAASM-------QKQTD-FIPSYPNLPSKLICMLQNVTLN 85

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEW-KFRHIFRGQPKRHL 179
           A D  T           E+V+  +  +LQP         ++ V +    + F GQPKRHL
Sbjct: 86  A-DPET-----------EEVYAQM--TLQP---------VNKVRYLSLYNSFLGQPKRHL 122

Query: 180 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLA 239
           LTTGWSVFVS KRL AGDSVLF+ + K QLLLGIRRA R    + SSV+SSDSMHIG+LA
Sbjct: 123 LTTGWSVFVSTKRLFAGDSVLFVRDGKGQLLLGIRRANRQQPALSSSVISSDSMHIGVLA 182

Query: 240 AAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRR 299
           AAAHA A NS FT+F+NPRA+P+EFV+PL KY KA++  +VS+GMRFRM+FETEE  VRR
Sbjct: 183 AAAHANANNSPFTIFYNPRAAPAEFVVPLAKYTKAMY-AQVSLGMRFRMIFETEECGVRR 241

Query: 300 YMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL 359
           YMGT+TGISDLDPVRW NS WR++++GWDES AG+R  RVS+W+IEP+ T P Y  + P 
Sbjct: 242 YMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVLT-PFY--ICPP 298

Query: 360 RLKRPWHPSTSSFNDNRDETASGLN----WLRGG 389
              RP         D+  +  S L     WL  G
Sbjct: 299 PFFRPRFAGQPGMPDDGTDMESALKRAMPWLDNG 332



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 63/112 (56%), Positives = 83/112 (74%), Gaps = 1/112 (0%)

Query: 679  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 738
            RT+ KV K GSVGRS+D++R+  Y+ELR +L +MFGIEG+ EDPL S W+LV+VD END+
Sbjct: 1347 RTYTKVQKRGSVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPLTSDWKLVYVDHENDI 1406

Query: 739  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANSRGNCG 790
            LL+GDDPWE FV+ V  IKILS  +VQ+M   G  +  P++ Q A S G+ G
Sbjct: 1407 LLVGDDPWEEFVNCVQSIKILSSAEVQQMSLDGNFAGLPATNQ-ACSGGDNG 1457


>gi|291196883|emb|CAX63135.1| ARF-L2 protein [Ginkgo biloba]
          Length = 912

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 221/406 (54%), Positives = 272/406 (66%), Gaps = 49/406 (12%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQ--------------------------- 40
           + SELWHACAGPL+SLP  G+ VVYFPQGH EQ                           
Sbjct: 29  ICSELWHACAGPLISLPPKGSLVVYFPQGHMEQLIDNDPHKFGFDSPLKFTPPVAPVLEK 88

Query: 41  -------VAATTNKEVDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPE 93
                  VAA+  + VD   P Y NLPPQ++C++ NV +HAD E DEVYAQ+TL P S +
Sbjct: 89  TAVASMHVAASIKQGVDQQTPPY-NLPPQILCRVLNVNLHADQEMDEVYAQLTLVPESEK 147

Query: 94  EQKDTFVPIELGIPSKQPT--NYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPP 151
            +K     +E  +P+      + FCKTLTASDTSTHGGFSVPRRAAE  FP LD++ Q P
Sbjct: 148 SEK----CMEEQVPASTSCTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYTQQRP 203

Query: 152 AQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLL 211
           +QEL+A+DLH  EW+FRHIFRGQP+RHLLTTGWSVFVS KRLV+GD+VLF+  E  +L L
Sbjct: 204 SQELVAKDLHGREWRFRHIFRGQPRRHLLTTGWSVFVSNKRLVSGDAVLFLRGENGELRL 263

Query: 212 GIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKY 271
           GIRRA R  +   SSVLSS SMH+G+L AAAHA AT S F +FFNPR SP+EFVIP  KY
Sbjct: 264 GIRRASRQQSYASSSVLSSQSMHLGVLTAAAHAVATKSMFHIFFNPRTSPAEFVIPYHKY 323

Query: 272 VKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDEST 331
           VK+  H  +++GMRF+M FETE+++ RRY GTITGI D++P RW  S WRS+KV WDE  
Sbjct: 324 VKSFNHP-LAIGMRFKMRFETEDAAERRYTGTITGIGDVEPARWPGSKWRSLKVEWDEHA 382

Query: 332 AGERQPRVSLWEIEPLTT-----FPMYPSLFPLRLKRPWHPSTSSF 372
           A ERQ RVS WEIEP  +      P  P +   RL+  + P+++  
Sbjct: 383 ANERQERVSPWEIEPFISSTGLNIPAGPRI--KRLRTSFQPTSTDL 426



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 41/90 (45%), Positives = 62/90 (68%), Gaps = 2/90 (2%)

Query: 679 RTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 737
           R+  KV+K G +VGR++D+S+F  Y+EL  EL ++F +E    DP + GW +V+ D E D
Sbjct: 784 RSCTKVHKQGNAVGRAVDLSKFHGYDELIRELERLFNMENLLSDPEK-GWHVVYTDNEGD 842

Query: 738 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           ++L+GDDPW+ F S V  I I + E+V+KM
Sbjct: 843 IMLVGDDPWQEFCSIVCKIMIYTREEVEKM 872


>gi|413934806|gb|AFW69357.1| hypothetical protein ZEAMMB73_033328 [Zea mays]
          Length = 975

 Score =  409 bits (1052), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 218/341 (63%), Positives = 254/341 (74%), Gaps = 42/341 (12%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           +NSELWHACAGPLVSLP  G+ VVYFPQGHSEQ                           
Sbjct: 33  INSELWHACAGPLVSLPPAGSLVVYFPQGHSEQF-------------------------- 66

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQP-TNYFCKTLTASDTST 126
             + +   V  D+ Y +  LQ LS           EL +   +P T +FCKTLTASDTST
Sbjct: 67  --LDIKLTVNGDQ-YGKEALQ-LS-----------ELALKQPRPQTEFFCKTLTASDTST 111

Query: 127 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 186
           HGGFSVPRRAAEK+FP LDFS+QPPAQE+ ARDLHD  W FRHI+RGQPKRHLLTTGWS+
Sbjct: 112 HGGFSVPRRAAEKIFPPLDFSMQPPAQEIQARDLHDNVWTFRHIYRGQPKRHLLTTGWSL 171

Query: 187 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 246
           FVS KRL+AGDSV+F+ +EK QLLLG RRA R PT + SSVLSSDSMHIG+LAAAAHAAA
Sbjct: 172 FVSGKRLLAGDSVIFVRDEKQQLLLGTRRANRQPTNISSSVLSSDSMHIGILAAAAHAAA 231

Query: 247 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 306
            NS FT+F+NPRASP+EFV+P  KY KA++  ++S+GMRFRM+FETEE   RRYMGTITG
Sbjct: 232 NNSPFTIFYNPRASPTEFVVPFAKYQKALYGNQISLGMRFRMMFETEELGTRRYMGTITG 291

Query: 307 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 347
           ISDLDPVRW NS WR+++VGWDES AGER+ RVS+WEIEP+
Sbjct: 292 ISDLDPVRWKNSQWRNIQVGWDESAAGERRNRVSIWEIEPV 332



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 55/97 (56%), Positives = 74/97 (76%)

Query: 675 LTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDR 734
           L   RTF KVYK G+VGRS+DIS+FS Y+EL+  L +MF +EG+ E+  R GW+LV+ D 
Sbjct: 838 LKRMRTFTKVYKRGAVGRSIDISQFSGYDELKHALARMFSMEGQLEERQRIGWKLVYKDH 897

Query: 735 ENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 771
           E+D+LLLGDDPWE FV+ V  I+ILSP++VQ++   G
Sbjct: 898 EDDILLLGDDPWEEFVNCVKCIRILSPQEVQQISLDG 934


>gi|301793205|emb|CBA11993.1| putative auxin response factor 2 [Amborella trichopoda]
          Length = 737

 Score =  402 bits (1034), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 202/362 (55%), Positives = 260/362 (71%), Gaps = 6/362 (1%)

Query: 5   NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLI 64
           N  L +ELWHACAGPLVS+P +G +V YFPQGH+EQV  +TN+  D  +PNY +LP +++
Sbjct: 39  NDGLYTELWHACAGPLVSVPQMGDKVFYFPQGHTEQVEKSTNQGADQPMPNY-DLPSKIL 97

Query: 65  CQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNY-FCKTLTASD 123
           C++ NV + A+ +TDEVYAQ+TL P  P + + T     +  P ++P  Y FCKTLTASD
Sbjct: 98  CRVVNVWLKAEPDTDEVYAQLTLIP-EPNQDETTLEKETVQSPPRRPHVYSFCKTLTASD 156

Query: 124 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 183
           TSTHGGFSV RR AE+  P LD S QPP QEL+A+DLH VEW+FRHIFRGQP+RHLLTTG
Sbjct: 157 TSTHGGFSVLRRHAEECLPRLDMSQQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLTTG 216

Query: 184 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAH 243
           WS FVS+KRLVAGD+ +F+  E  +L +G+RRA+R    MP+SV+SS SMH+G+LA A H
Sbjct: 217 WSAFVSSKRLVAGDAFIFLRGENGELRVGVRRALRQQNNMPTSVISSHSMHLGVLATAMH 276

Query: 244 AAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGT 303
           A +T + F+VF+ PR SPSEFVIP  +Y+++V     S+GMRFRM FE EE+  +R+ GT
Sbjct: 277 AFSTGTMFSVFYRPRTSPSEFVIPYDQYMESV-KNNYSIGMRFRMRFEGEETPEQRFTGT 335

Query: 304 ITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYPSLFPLRLK 362
           I G+ D D  RW  S WR +KV WDE ++ ER  RVS W+IEP      + P   P R K
Sbjct: 336 IVGVEDYDSNRWPASKWRCLKVQWDEQSSVERPLRVSPWKIEPSAAPTAINPPPIP-RAK 394

Query: 363 RP 364
           RP
Sbjct: 395 RP 396



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 43/98 (43%), Positives = 66/98 (67%), Gaps = 5/98 (5%)

Query: 674 QLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFV 732
           Q T TR+  KV+  G ++GRS+D+++F  Y +L  EL +MFG EG+  DP++ GWQ+V+ 
Sbjct: 607 QSTSTRSCTKVHMQGNALGRSVDLTKFKGYKDLVAELDRMFGFEGELMDPMK-GWQVVYT 665

Query: 733 DRENDVLLLGDDPWEAFVSN---VWYIKILSPEDVQKM 767
           D E D++L+GDDPW+ +      V  I I + E+VQ+M
Sbjct: 666 DDEGDMMLVGDDPWQRYREXCVMVRKIYIYTREEVQRM 703


>gi|148910654|gb|ABR18397.1| unknown [Picea sitchensis]
          Length = 920

 Score =  400 bits (1027), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 220/397 (55%), Positives = 274/397 (69%), Gaps = 42/397 (10%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVA-------------------- 42
           G++ C   ELWHACAGPL+SLP  G+RVVYFPQGH EQ+A                    
Sbjct: 32  GNSVC--PELWHACAGPLISLPPKGSRVVYFPQGHLEQIADNELHKVGRGSFLNINQAVT 89

Query: 43  ----------------ATTNKEVDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMT 86
                           ++ ++ V+  + +Y  LPPQ++C++ NV +HAD E DEVYAQ+T
Sbjct: 90  PMAEEASSAASLNIPPSSISQAVNQQMLSY-KLPPQILCRVLNVNLHADQEMDEVYAQLT 148

Query: 87  LQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDF 146
           L P S  E+ +  +  +L +P     + FCKTLTASDTSTHGGFSVPRRAAE  FP LD+
Sbjct: 149 LVPDS--EKSEKCIEEQLPVPPSSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDY 206

Query: 147 SLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEK 206
           S Q P+QEL+A+DLH  EW+FRHIFRGQP+RHLLTTGWSVFVS KRLVAGD+VLF+ +E 
Sbjct: 207 SQQRPSQELVAKDLHGREWRFRHIFRGQPRRHLLTTGWSVFVSYKRLVAGDAVLFLRDEN 266

Query: 207 NQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVI 266
            +L LGIRRA +  + +PSSVLSS  +H G+LAA AHA AT S F +F+NPR SP+EFVI
Sbjct: 267 GELRLGIRRASQQQSSVPSSVLSSHGIHSGVLAAVAHAVATKSMFHIFYNPRTSPTEFVI 326

Query: 267 PLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVG 326
           P  KYVK+  H+  S+GMRF+M FETE+++ RRY GTI GI D+DP+RW NS WRS KVG
Sbjct: 327 PYHKYVKSFNHS-FSIGMRFKMRFETEDATERRYTGTIVGIGDVDPMRWPNSEWRSFKVG 385

Query: 327 WDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKR 363
           WDE  A ERQ RVS WEIEP T+     +L   R+KR
Sbjct: 386 WDEHAAQERQERVSPWEIEPFTSATGLNALPGPRVKR 422



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/183 (32%), Positives = 91/183 (49%), Gaps = 28/183 (15%)

Query: 610 QNSVVFGVHIDSSGLLLPTTVSSFTTSVDPGVSS-----MPLGDSGFHNSMYGCMQDSSE 664
           +N  +FG  +      +   +SS  T  + GVSS     +P GD  F  +       S +
Sbjct: 701 RNCKLFGFSLLKESACVDDPISSAMT--EDGVSSDGGLHVPPGDGPFQTAHSKHSDQSEK 758

Query: 665 LLHN--------------VGQIDQLTPT-----RTFVKVYKSG-SVGRSLDISRFSSYNE 704
            LHN              +    +L  +     R+  KV+K G +VGR++D+S+   Y+E
Sbjct: 759 ELHNHYGHEITLRSMEQEISSYAKLRNSVQASGRSCTKVHKQGNAVGRAVDLSKLRGYDE 818

Query: 705 LREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDV 764
           L  EL  +F +EG    P + GW +V+ D E D++L+GDDPW+ F + V  I I + E+V
Sbjct: 819 LIRELEHLFNMEGLLSTPEK-GWHIVYTDNEGDIMLVGDDPWQEFCNIVCKILICTQEEV 877

Query: 765 QKM 767
           QKM
Sbjct: 878 QKM 880


>gi|218201472|gb|EEC83899.1| hypothetical protein OsI_29915 [Oryza sativa Indica Group]
 gi|222640880|gb|EEE69012.1| hypothetical protein OsJ_27964 [Oryza sativa Japonica Group]
          Length = 1031

 Score =  399 bits (1025), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 232/395 (58%), Positives = 276/395 (69%), Gaps = 25/395 (6%)

Query: 72  MHADVETDEVYAQMTLQPLSPEEQ--KDTFVPIELGIPSKQP-TNYFCKTLTASDTSTHG 128
           M AD +TDEVYA+MTLQP+S   Q  K+T +  EL +   +P T +FCKTLTASDTSTHG
Sbjct: 1   MEADPDTDEVYARMTLQPVSNVTQCDKETLLASELALKQTRPQTEFFCKTLTASDTSTHG 60

Query: 129 GFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFV 188
           GFSVPRRAAE++FP LDFS+QPPAQEL ARDLHD  W FRHI+RGQPKRHLLTTGWS+FV
Sbjct: 61  GFSVPRRAAERIFPRLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFV 120

Query: 189 SAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAATN 248
           S KRL+AGDSVLFI + K QLLLGIRRA R PT + SSVLSSDSMHIG+LAAAAHAAA N
Sbjct: 121 SGKRLLAGDSVLFIRDAKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAANN 180

Query: 249 SCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGIS 308
           S FT+++NPRAS SEFVIP  KY KAV+  ++S+GMRFRM+FETEES  RRYMGTITGIS
Sbjct: 181 SQFTIYYNPRASTSEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEESGTRRYMGTITGIS 240

Query: 309 DLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPS-LFPLRLKRPWH 366
           DLDPVRW  SHWR+++V WDE+   ER+ RVSLWEIEP+   F +YPS LF    KRP  
Sbjct: 241 DLDPVRWKTSHWRNIQVAWDEAAPTERRTRVSLWEIEPIIAPFFIYPSPLF--TAKRPRL 298

Query: 367 PSTSSFNDNRDETASGLNWLRGGTGEQGLTT-LNFQS-----LGMFPWMQQR-------- 412
           P  +   D+  E    L       GE+     LN Q+     L +  WM  +        
Sbjct: 299 PGMT---DDETEMDGLLKRAMPWVGEEICKKDLNIQNSVVPGLNLAQWMNMQHSSSLPGT 355

Query: 413 -VEPSFLGNDHNQQYQAMLAAGMQSGDPVRQQFMQ 446
            V+P  L +   +  Q + AA +        QF+Q
Sbjct: 356 VVQPELLNSLSGKPVQNLAAADLSRQISFHPQFLQ 390



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 87/238 (36%), Positives = 129/238 (54%), Gaps = 37/238 (15%)

Query: 590  PSSYNG----KDAAVGTENCNTDSQNSVVFGVHIDSS-GLLLPTTVSSFTTSVDPGVSSM 644
            PSS++     KD    +E   TD +N+++FGV+ID   GL L   + +     D  +  +
Sbjct: 791  PSSFHQHHLLKDTVPDSEFEVTDPRNNLLFGVNIDGQLGLPLNADLLANDIGTDKYMDQL 850

Query: 645  P-LGDSGFHNSMYGCMQDSSELL-HNVGQIDQL----------TP--------------- 677
            P  G S F +S     + SS ++ H+ G  D            TP               
Sbjct: 851  PGNGISNFISSKDSQQELSSSMISHSFGVADMAFNSIDSAINDTPFLNRNSRSAAGPAHQ 910

Query: 678  -TRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
              RT+ KV+K G+VGRS+DI+R+S Y+EL+ ++ +MFGIEG+  D  R GW+LV+ D E 
Sbjct: 911  RMRTYTKVHKRGAVGRSIDINRYSGYDELKHDVARMFGIEGQLGDQNRVGWKLVYEDHEK 970

Query: 737  DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM---GEQGVESFSPSSGQRANSRGNCGR 791
            DVLL+GDDPWE FV  V  I+ILSP++  +M   G+ G +SF P+    ++  G+  R
Sbjct: 971  DVLLVGDDPWEDFVKCVRCIRILSPQEEMQMRLVGDFG-DSFLPNQACSSSDGGHPWR 1027


>gi|301793235|emb|CBA12008.1| putative auxin response factor 3/4 [Pinus pinaster]
          Length = 919

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 217/389 (55%), Positives = 270/389 (69%), Gaps = 40/389 (10%)

Query: 11  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVA---------------------------- 42
           ELWHACAGPL+SLP  G+RVVYFPQGH EQ+A                            
Sbjct: 38  ELWHACAGPLISLPPKGSRVVYFPQGHLEQIADNELHRGGRGSFLNVNHAAAPMAEEASS 97

Query: 43  --------ATTNKEVDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEE 94
                   ++ ++ V+  + +Y  LPPQ++C++ NV +HAD E DEVYAQ+TL P S  E
Sbjct: 98  AAALNIPPSSISQAVNQQMLSY-KLPPQILCRVLNVNLHADQEMDEVYAQLTLVPDS--E 154

Query: 95  QKDTFVPIELGIPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQE 154
           + +  +  +L +P     + FCKTLTASDTSTHGGFSVPRRAAE  FP LD+S Q P+QE
Sbjct: 155 KNEKCMEEQLSVPPSSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQE 214

Query: 155 LIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIR 214
           L+A+DLH  EW+FRHIFRGQP+RHLLTTGWSVFVS KRLVAGD+VLF+ +E  +L LGIR
Sbjct: 215 LVAKDLHGREWRFRHIFRGQPRRHLLTTGWSVFVSYKRLVAGDAVLFLRDENGELRLGIR 274

Query: 215 RAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKA 274
           RA +  + +PSSVLSS  +H G+LAA AHA AT S F +++NPR SP+EFVIP  KYVK+
Sbjct: 275 RASQQQSSVPSSVLSSHGIHSGVLAAVAHAVATKSMFHIYYNPRTSPTEFVIPYHKYVKS 334

Query: 275 VFHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGE 334
             H+  S+GMRF+M FETE+++ RRY GTI GI D+DP+RW NS WRS KVGWDE  A E
Sbjct: 335 FNHS-FSIGMRFKMRFETEDATERRYTGTIVGIGDVDPMRWPNSRWRSFKVGWDEHAAQE 393

Query: 335 RQPRVSLWEIEPLTTFPMYPSLFPLRLKR 363
           RQ RVS WEIEP T+     +L   R+KR
Sbjct: 394 RQDRVSPWEIEPFTSATGLNALPGPRVKR 422



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 40/90 (44%), Positives = 60/90 (66%), Gaps = 2/90 (2%)

Query: 679 RTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 737
           R+  KV+K G +VGR++D+S+   Y+EL  EL  +F +EG    P + GW +V+ D E D
Sbjct: 791 RSCTKVHKQGNAVGRAVDLSKLRGYDELIRELEHLFNMEGLLSTPEK-GWHIVYTDNEGD 849

Query: 738 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           ++L+GDDPW+ F + V  I I + E+VQKM
Sbjct: 850 IMLVGDDPWQEFCNIVCKILICTQEEVQKM 879


>gi|224122162|ref|XP_002318767.1| predicted protein [Populus trichocarpa]
 gi|222859440|gb|EEE96987.1| predicted protein [Populus trichocarpa]
          Length = 854

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 192/361 (53%), Positives = 259/361 (71%), Gaps = 5/361 (1%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
            L +ELWHACAGPLV++P  G  V YFPQGH EQV A+TN+  D  +P Y +LPP+++C+
Sbjct: 49  ALYNELWHACAGPLVTVPREGDHVFYFPQGHLEQVEASTNQVADQQMPLY-DLPPKILCR 107

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 126
           + NV + A+ +TDEV+AQ+TL PL  +++  +        P +   + FCKTLTASDTST
Sbjct: 108 VVNVQLKAEPDTDEVFAQVTLLPLHNQDENASEKEPPPPPPPRFHVHSFCKTLTASDTST 167

Query: 127 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 186
           HGGFSV RR A++  P LD S QPP QEL+A+DLH  EW+FRHIFRGQP+RHLL +GWSV
Sbjct: 168 HGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGSEWRFRHIFRGQPRRHLLQSGWSV 227

Query: 187 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 246
           FVS+KRLVAGD+ +F+  E  +L +G+RRA+R  + +PSSV+SS SMH+G+LA A HA +
Sbjct: 228 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQSNVPSSVISSHSMHLGVLATAWHAVS 287

Query: 247 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 306
           T + FTV++ PR SP+EF++P  +Y+++V  +  S+GMRF+M FE EE+  +R+ GTI G
Sbjct: 288 TGTMFTVYYKPRTSPAEFIVPFDQYMESV-KSNYSIGMRFKMRFEGEEAPEQRFTGTIVG 346

Query: 307 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWH 366
           I D DP RW +S WR +KV WDE++   R  RVS W+IEP       P+L PL + RP  
Sbjct: 347 IEDADPSRWKDSKWRCLKVRWDETSTIPRPDRVSPWKIEPALA---PPALNPLPMPRPKR 403

Query: 367 P 367
           P
Sbjct: 404 P 404



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 40/95 (42%), Positives = 67/95 (70%), Gaps = 2/95 (2%)

Query: 674 QLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFV 732
           Q + TR+  KV+K G ++GRS+D++RF++Y+EL  EL ++F   G+   P ++ W +V+ 
Sbjct: 723 QNSSTRSCTKVHKQGIALGRSVDLTRFNNYDELIAELDRLFEFNGELLAPQKN-WLIVYT 781

Query: 733 DRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           D E+D++L+GDDPW+ FV  V  I I + E+VQ++
Sbjct: 782 DDEDDMMLVGDDPWQEFVGMVRKIVIYTREEVQRI 816


>gi|301793211|emb|CBA11996.1| putative auxin response factor 2 [Cabomba aquatica]
          Length = 782

 Score =  397 bits (1020), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 190/358 (53%), Positives = 257/358 (71%), Gaps = 4/358 (1%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           L +ELWHACAGPLV++P  G +V YFPQGH EQV A+TN+  D  +P Y  LP +++C +
Sbjct: 55  LYNELWHACAGPLVTVPRRGEKVFYFPQGHIEQVEASTNQVSDQQMPIY-KLPSKILCTV 113

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTH 127
            N+ + A+ +TDEV+AQMTL P S +++KD  +     + S+   + FCKTLTASDTSTH
Sbjct: 114 INIDLKAEPDTDEVFAQMTLVPESTQDEKDIIIETPPPLQSRPHVHSFCKTLTASDTSTH 173

Query: 128 GGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 187
           GGFSV RR A++  P LD   QPP+QEL+A+DLH  EW FRHIFRGQP+RHLL +GWSVF
Sbjct: 174 GGFSVLRRHADECLPPLDMCRQPPSQELVAKDLHGKEWSFRHIFRGQPRRHLLQSGWSVF 233

Query: 188 VSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAAT 247
           VS+KRLVAGD+ +F+  E  +L +G+RRA+R  + +PSSV+SS SMH+G+LA A+HA  T
Sbjct: 234 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQSNVPSSVISSHSMHLGVLATASHAIQT 293

Query: 248 NSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGI 307
            + FTV++ PR SPSEF++P  +YV+++     S+GMRF+M FE EE+  +R+ GTI GI
Sbjct: 294 GTMFTVYYKPRTSPSEFIVPFAQYVESI-KKNYSIGMRFKMRFEGEEAPEQRFTGTIIGI 352

Query: 308 SDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL-RLKRP 364
            D+D  RW  S WR +KV WDE T+  R  ++S W+IEP    P+  +  P+ R KRP
Sbjct: 353 GDVDSTRWPESKWRCLKVRWDEQTSVPRPDKISPWQIEPALA-PIALNPLPVSRTKRP 409



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 33/71 (46%), Positives = 50/71 (70%), Gaps = 2/71 (2%)

Query: 678 TRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           TR+  KV K GS +GRS+D+++F+SY EL  EL  MF  +G+  +  ++ W +V+ D E 
Sbjct: 713 TRSCTKVQKQGSALGRSVDLAKFTSYEELITELDHMFEFQGELMNSNKN-WLVVYTDNEG 771

Query: 737 DVLLLGDDPWE 747
           D++L+GDDPWE
Sbjct: 772 DMMLVGDDPWE 782


>gi|62319853|dbj|BAD93891.1| ARF1-binding protein [Arabidopsis thaliana]
 gi|62319857|dbj|BAD93897.1| ARF1-binding protein [Arabidopsis thaliana]
 gi|62319897|dbj|BAD93959.1| ARF1-binding protein [Arabidopsis thaliana]
          Length = 859

 Score =  396 bits (1017), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 191/364 (52%), Positives = 258/364 (70%), Gaps = 5/364 (1%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
            L  ELWHACAGPLV++P    RV YFPQGH EQV A+TN+  +  +P Y +LP +L+C+
Sbjct: 57  ALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLY-DLPSKLLCR 115

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 126
           + NV + A+ +TDEVYAQ+TL P + +++        L  P +   + FCKTLTASDTST
Sbjct: 116 VINVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPPPPRFQVHSFCKTLTASDTST 175

Query: 127 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 186
           HGGFSV RR A++  P LD S QPP QEL+A+DLH  EW+FRHIFRGQP+RHLL +GWSV
Sbjct: 176 HGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSV 235

Query: 187 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 246
           FVS+KRLVAGD+ +F+  E  +L +G+RRA+R    +PSSV+SS SMH+G+LA A HA +
Sbjct: 236 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAIS 295

Query: 247 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 306
           T + FTV++ PR SPSEF++P  +Y+++V     S+GMRF+M FE EE+  +R+ GTI G
Sbjct: 296 TGTMFTVYYKPRTSPSEFIVPFDQYMESV-KNNYSIGMRFKMRFEGEEAPEQRFTGTIVG 354

Query: 307 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWH 366
           I + DP RW  S WRS+KV WDE+++  R  RVS W++EP       P+L P+ + RP  
Sbjct: 355 IEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALA---PPALSPVPMPRPKR 411

Query: 367 PSTS 370
           P ++
Sbjct: 412 PRSN 415



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 61/91 (67%), Gaps = 2/91 (2%)

Query: 678 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           +R+  KV+K G ++GRS+D+S+F +Y EL  EL ++F   G+   P +  W +V+ D EN
Sbjct: 732 SRSCTKVHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGELMAP-KKDWLIVYTDEEN 790

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           D++L+GDDPW+ F   V  I I + E+V+KM
Sbjct: 791 DMMLVGDDPWQEFCCMVRKIFIYTKEEVRKM 821


>gi|62319903|dbj|BAD93968.1| ARF1-binding protein [Arabidopsis thaliana]
          Length = 859

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 191/364 (52%), Positives = 258/364 (70%), Gaps = 5/364 (1%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
            L  ELWHACAGPLV++P    RV YFPQGH EQV A+TN+  +  +P Y +LP +L+C+
Sbjct: 57  ALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLY-DLPSKLLCR 115

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 126
           + NV + A+ +TDEVYAQ+TL P + +++        L  P +   + FCKTLTASDTST
Sbjct: 116 VINVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPPPPRFQVHSFCKTLTASDTST 175

Query: 127 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 186
           HGGFSV RR A++  P LD S QPP QEL+A+DLH  EW+FRHIFRGQP+RHLL +GWSV
Sbjct: 176 HGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSV 235

Query: 187 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 246
           FVS+KRLVAGD+ +F+  E  +L +G+RRA+R    +PSSV+SS SMH+G+LA A HA +
Sbjct: 236 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAIS 295

Query: 247 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 306
           T + FTV++ PR SPSEF++P  +Y+++V     S+GMRF+M FE EE+  +R+ GTI G
Sbjct: 296 TGTMFTVYYKPRTSPSEFIVPFDQYMESV-KNNYSIGMRFKMRFEGEEAPEQRFTGTIVG 354

Query: 307 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWH 366
           I + DP RW  S WRS+KV WDE+++  R  RVS W++EP       P+L P+ + RP  
Sbjct: 355 IEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALA---PPALSPVPMPRPKR 411

Query: 367 PSTS 370
           P ++
Sbjct: 412 PRSN 415



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 61/91 (67%), Gaps = 2/91 (2%)

Query: 678 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           +R+  KV+K G ++GRS+D+S+F +Y EL  EL ++F   G+   P +  W +V+ D EN
Sbjct: 732 SRSCTKVHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGELMAP-KKDWLIVYTDEEN 790

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           D++L+GDDPW+ F   V  I I + E+V+KM
Sbjct: 791 DMMLVGDDPWQEFCCMVRKIFIYTKEEVRKM 821


>gi|30697610|ref|NP_851244.1| auxin response factor 2 [Arabidopsis thaliana]
 gi|30697612|ref|NP_201006.2| auxin response factor 2 [Arabidopsis thaliana]
 gi|42573768|ref|NP_974980.1| auxin response factor 2 [Arabidopsis thaliana]
 gi|46395940|sp|Q94JM3.2|ARFB_ARATH RecName: Full=Auxin response factor 2; AltName: Full=ARF1-binding
           protein; Short=ARF1-BP; AltName: Full=Protein
           MEGAINTEGUMENTA
 gi|10176918|dbj|BAB10162.1| auxin response factor-like protein [Arabidopsis thaliana]
 gi|23397283|gb|AAN31923.1| auxin response factor [Arabidopsis thaliana]
 gi|49616349|gb|AAT67071.1| ARF2 [Arabidopsis thaliana]
 gi|62319913|dbj|BAD93985.1| ARF1-binding protein [Arabidopsis thaliana]
 gi|62319959|dbj|BAD94058.1| ARF1-binding protein [Arabidopsis thaliana]
 gi|332010165|gb|AED97548.1| auxin response factor 2 [Arabidopsis thaliana]
 gi|332010166|gb|AED97549.1| auxin response factor 2 [Arabidopsis thaliana]
 gi|332010167|gb|AED97550.1| auxin response factor 2 [Arabidopsis thaliana]
          Length = 859

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 191/364 (52%), Positives = 258/364 (70%), Gaps = 5/364 (1%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
            L  ELWHACAGPLV++P    RV YFPQGH EQV A+TN+  +  +P Y +LP +L+C+
Sbjct: 57  ALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLY-DLPSKLLCR 115

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 126
           + NV + A+ +TDEVYAQ+TL P + +++        L  P +   + FCKTLTASDTST
Sbjct: 116 VINVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPPPPRFQVHSFCKTLTASDTST 175

Query: 127 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 186
           HGGFSV RR A++  P LD S QPP QEL+A+DLH  EW+FRHIFRGQP+RHLL +GWSV
Sbjct: 176 HGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSV 235

Query: 187 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 246
           FVS+KRLVAGD+ +F+  E  +L +G+RRA+R    +PSSV+SS SMH+G+LA A HA +
Sbjct: 236 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAIS 295

Query: 247 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 306
           T + FTV++ PR SPSEF++P  +Y+++V     S+GMRF+M FE EE+  +R+ GTI G
Sbjct: 296 TGTMFTVYYKPRTSPSEFIVPFDQYMESV-KNNYSIGMRFKMRFEGEEAPEQRFTGTIVG 354

Query: 307 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWH 366
           I + DP RW  S WRS+KV WDE+++  R  RVS W++EP       P+L P+ + RP  
Sbjct: 355 IEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALA---PPALSPVPMPRPKR 411

Query: 367 PSTS 370
           P ++
Sbjct: 412 PRSN 415



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 61/91 (67%), Gaps = 2/91 (2%)

Query: 678 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           +R+  KV+K G ++GRS+D+S+F +Y EL  EL ++F   G+   P +  W +V+ D EN
Sbjct: 732 SRSCTKVHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGELMAP-KKDWLIVYTDEEN 790

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           D++L+GDDPW+ F   V  I I + E+V+KM
Sbjct: 791 DMMLVGDDPWQEFCCMVRKIFIYTKEEVRKM 821


>gi|334188562|ref|NP_001190591.1| auxin response factor 2 [Arabidopsis thaliana]
 gi|332010168|gb|AED97551.1| auxin response factor 2 [Arabidopsis thaliana]
          Length = 853

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 191/364 (52%), Positives = 258/364 (70%), Gaps = 5/364 (1%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
            L  ELWHACAGPLV++P    RV YFPQGH EQV A+TN+  +  +P Y +LP +L+C+
Sbjct: 57  ALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLY-DLPSKLLCR 115

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 126
           + NV + A+ +TDEVYAQ+TL P + +++        L  P +   + FCKTLTASDTST
Sbjct: 116 VINVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPPPPRFQVHSFCKTLTASDTST 175

Query: 127 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 186
           HGGFSV RR A++  P LD S QPP QEL+A+DLH  EW+FRHIFRGQP+RHLL +GWSV
Sbjct: 176 HGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSV 235

Query: 187 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 246
           FVS+KRLVAGD+ +F+  E  +L +G+RRA+R    +PSSV+SS SMH+G+LA A HA +
Sbjct: 236 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAIS 295

Query: 247 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 306
           T + FTV++ PR SPSEF++P  +Y+++V     S+GMRF+M FE EE+  +R+ GTI G
Sbjct: 296 TGTMFTVYYKPRTSPSEFIVPFDQYMESV-KNNYSIGMRFKMRFEGEEAPEQRFTGTIVG 354

Query: 307 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWH 366
           I + DP RW  S WRS+KV WDE+++  R  RVS W++EP       P+L P+ + RP  
Sbjct: 355 IEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALA---PPALSPVPMPRPKR 411

Query: 367 PSTS 370
           P ++
Sbjct: 412 PRSN 415



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 61/91 (67%), Gaps = 2/91 (2%)

Query: 678 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           +R+  KV+K G ++GRS+D+S+F +Y EL  EL ++F   G+   P +  W +V+ D EN
Sbjct: 732 SRSCTKVHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGELMAP-KKDWLIVYTDEEN 790

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           D++L+GDDPW+ F   V  I I + E+V+KM
Sbjct: 791 DMMLVGDDPWQEFCCMVRKIFIYTKEEVRKM 821


>gi|379323190|gb|AFD01294.1| auxin response factor 2-2 [Brassica rapa subsp. pekinensis]
          Length = 851

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 192/370 (51%), Positives = 261/370 (70%), Gaps = 5/370 (1%)

Query: 1   MIGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLP 60
           ++  +  L  ELWHACAGPLV++P    RV YFPQGH EQV A+TN+  +  +P Y +LP
Sbjct: 47  VVDPDAALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLY-DLP 105

Query: 61  PQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLT 120
            +++C++ NV + A+ +TDEVYAQ+TL P   +++           P +   + FCKTLT
Sbjct: 106 SKILCRVINVDLKAEADTDEVYAQITLLPEPVQDENAIEKESPPPPPPRFQVHSFCKTLT 165

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
           ASDTSTHGGFSV RR A++  P LD S QPP QEL+A+DLH  EW+FRHIFRGQP+RHLL
Sbjct: 166 ASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHASEWRFRHIFRGQPRRHLL 225

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 240
            +GWSVFVS+KRLVAGD+ +F+  E  +L +G+RRA+R    +PSSV+SS SMH+G+LA 
Sbjct: 226 QSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLAT 285

Query: 241 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 300
           A HA +T + FTV++ PR SPSEF++P  +Y+++V     S+GMRF+M FE EE+  +R+
Sbjct: 286 AWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESV-KNNYSIGMRFKMRFEGEEAPEQRF 344

Query: 301 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLR 360
            GTI GI D DP RW+ S WRS+KV WDE+T+  R  RVS W+IEP  +    P+L P+ 
Sbjct: 345 TGTIVGIEDSDPTRWAKSKWRSLKVRWDETTSIPRPDRVSPWKIEPALS---PPALSPVP 401

Query: 361 LKRPWHPSTS 370
           + RP  P ++
Sbjct: 402 MPRPKRPRSN 411



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 39/90 (43%), Positives = 59/90 (65%), Gaps = 2/90 (2%)

Query: 679 RTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 737
           R+  KV K G ++GRS+D+S+F +Y EL  EL ++F   G+   P +  W +V+ D END
Sbjct: 725 RSCTKVQKQGIALGRSVDLSKFQNYEELVTELDRLFEFNGELMAP-KKDWLIVYTDDEND 783

Query: 738 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           ++L+GDDPW+ F   V  I I + E+V+KM
Sbjct: 784 MMLVGDDPWQEFCCMVRKIFIYTKEEVRKM 813


>gi|47716275|emb|CAG30068.1| putative auxin response factor [Brassica napus]
          Length = 848

 Score =  394 bits (1012), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 192/370 (51%), Positives = 259/370 (70%), Gaps = 5/370 (1%)

Query: 1   MIGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLP 60
           ++     L  ELWHACAGPLV++P    RV YFPQGH EQV A+TN+  +  +P Y +LP
Sbjct: 46  VVDPEAALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLY-DLP 104

Query: 61  PQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLT 120
            +++C++ NV + A+ +TDEVYAQ+TL P   +++           P +   + FCKTLT
Sbjct: 105 SKILCRVINVDLKAEADTDEVYAQITLLPEPVQDENSIEKEAPPPPPPRFQVHSFCKTLT 164

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
           ASDTSTHGGFSV RR A++  P LD S QPP QEL+A+DLH  EW+FRHIFRGQP+RHLL
Sbjct: 165 ASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHASEWRFRHIFRGQPRRHLL 224

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 240
            +GWSVFVS+KRLVAGD+ +F+  E  +L +G+RRA+R    +PSSV+SS SMH+G+LA 
Sbjct: 225 QSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLAT 284

Query: 241 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 300
           A HA +T + FTV++ PR SPSEF++P  +Y ++V     S+GMRF+M FE EE+  +R+
Sbjct: 285 AWHAISTGTMFTVYYKPRTSPSEFIVPFDQYTESV-KINYSIGMRFKMRFEGEEAPEQRF 343

Query: 301 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLR 360
            GTI GI D DP RW+ S WRS+KV WDE+T+  R  RVS W+IEP  +    P+L P+ 
Sbjct: 344 TGTIVGIEDSDPTRWAKSKWRSLKVRWDETTSIPRPDRVSPWKIEPALS---PPALSPVP 400

Query: 361 LKRPWHPSTS 370
           + RP  P ++
Sbjct: 401 MPRPKRPRSN 410



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 39/90 (43%), Positives = 59/90 (65%), Gaps = 2/90 (2%)

Query: 679 RTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 737
           R+  KV K G ++GRS+D+S+F +Y EL  EL ++F   G+   P +  W +V+ D END
Sbjct: 722 RSCTKVQKQGIALGRSVDLSKFQNYEELVTELDRLFEFNGELMAP-KKDWLIVYTDDEND 780

Query: 738 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           ++L+GDDPW+ F   V  I I + E+V+KM
Sbjct: 781 MMLVGDDPWQEFCCMVRKIFIYTKEEVRKM 810


>gi|14190369|gb|AAK55665.1|AF378862_1 AT5g62000/mtg10_20 [Arabidopsis thaliana]
 gi|24111405|gb|AAN46837.1| At5g62000/mtg10_20 [Arabidopsis thaliana]
          Length = 678

 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 191/364 (52%), Positives = 258/364 (70%), Gaps = 5/364 (1%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
            L  ELWHACAGPLV++P    RV YFPQGH EQV A+TN+  +  +P Y +LP +L+C+
Sbjct: 57  ALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLY-DLPSKLLCR 115

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 126
           + NV + A+ +TDEVYAQ+TL P + +++        L  P +   + FCKTLTASDTST
Sbjct: 116 VINVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPPPPRFQVHSFCKTLTASDTST 175

Query: 127 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 186
           HGGFSV RR A++  P LD S QPP QEL+A+DLH  EW+FRHIFRGQP+RHLL +GWSV
Sbjct: 176 HGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSV 235

Query: 187 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 246
           FVS+KRLVAGD+ +F+  E  +L +G+RRA+R    +PSSV+SS SMH+G+LA A HA +
Sbjct: 236 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAIS 295

Query: 247 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 306
           T + FTV++ PR SPSEF++P  +Y+++V     S+GMRF+M FE EE+  +R+ GTI G
Sbjct: 296 TGTMFTVYYKPRTSPSEFIVPFDQYMESV-KNNYSIGMRFKMRFEGEEAPEQRFTGTIVG 354

Query: 307 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWH 366
           I + DP RW  S WRS+KV WDE+++  R  RVS W++EP       P+L P+ + RP  
Sbjct: 355 IEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALA---PPALSPVPMPRPKR 411

Query: 367 PSTS 370
           P ++
Sbjct: 412 PRSN 415


>gi|312282635|dbj|BAJ34183.1| unnamed protein product [Thellungiella halophila]
          Length = 854

 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 192/364 (52%), Positives = 257/364 (70%), Gaps = 5/364 (1%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
            L  ELWHACAGPLV++P    RV YFPQGH EQV A+TN+  +  +P Y +LP +L+C+
Sbjct: 57  ALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLY-DLPSKLLCR 115

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 126
           + NV + A+ +TDEVYAQ+TL P   +++           P +   + FCKTLTASDTST
Sbjct: 116 VINVDLKAEADTDEVYAQITLLPEPNQDENVIEKETPPPPPPRFQVHSFCKTLTASDTST 175

Query: 127 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 186
           HGGFSV RR A++  P LD S QPP QEL+A+DLH  EW+FRHIFRGQP+RHLL +GWSV
Sbjct: 176 HGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSV 235

Query: 187 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 246
           FVS+KRLVAGD+ +F+  E  +L +G+RRA+R    +PSSV+SS SMH+G+LA A HA +
Sbjct: 236 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAIS 295

Query: 247 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 306
           T + FTV++ PR SPSEF++P  +Y+++V     S+GMRF+M FE EE+  +R+ GTI G
Sbjct: 296 TGTMFTVYYKPRTSPSEFIVPFDQYMESV-KNNYSIGMRFKMRFEGEEAPEQRFTGTIVG 354

Query: 307 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWH 366
           I D DP RW+ S WRS+KV WDE+++  R  RVS W+IEP       P+L P+ + RP  
Sbjct: 355 IEDSDPTRWAKSKWRSLKVRWDETSSIPRPDRVSPWKIEPALA---PPALSPVPMPRPKR 411

Query: 367 PSTS 370
           P ++
Sbjct: 412 PRSN 415



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 60/91 (65%), Gaps = 2/91 (2%)

Query: 678 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           +R+  KV+K G ++GRS+D+S+F +Y EL  EL ++F   G+   P +  W +V+ D EN
Sbjct: 727 SRSCTKVHKQGIALGRSVDLSKFQNYEELIAELDRLFEFNGELMAP-KKDWLIVYTDDEN 785

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           D++ +GDDPW+ F   V  I I + E+V+KM
Sbjct: 786 DMMRVGDDPWQEFCCMVRKIFIYTKEEVRKM 816


>gi|291196863|emb|CAX63111.1| ARF4 protein [Cabomba aquatica]
          Length = 709

 Score =  393 bits (1010), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 207/367 (56%), Positives = 259/367 (70%), Gaps = 14/367 (3%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTN--KEVDSH---IPNYPNLPP 61
           CL  ELWHACAGPL+ LP  G  VVYFPQGH EQV A ++  K ++ H   +  Y +LPP
Sbjct: 48  CL--ELWHACAGPLIYLPKKGHTVVYFPQGHLEQVLAASSYFKSLEHHQIRMLTY-DLPP 104

Query: 62  QLICQLHNVTMHADVETDEVYAQMTLQP-LSPEE--QKDTFVPIELG--IPSKQPTNYFC 116
           Q+ C++ +V +HAD E D+VYAQ+TL P L   E   K+     E G  I  K   + FC
Sbjct: 105 QIFCRVLDVKLHADQENDDVYAQVTLLPELESNEVCGKNLEEDEESGSEILCKTIPHMFC 164

Query: 117 KTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPK 176
           KTLTASDTSTHGGFSVPRRAAE  FP LD+S Q P+QEL+A+DLH  EWKFRHI+RGQP+
Sbjct: 165 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWKFRHIYRGQPR 224

Query: 177 RHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIG 236
           RHLLTTGWSVFV+ K LV+GD+VLF+  E  +L LGIRRA RPP+ +P SVLSS  +H+ 
Sbjct: 225 RHLLTTGWSVFVNQKGLVSGDAVLFLRGEDGELRLGIRRASRPPSSIPYSVLSSQGLHLS 284

Query: 237 LLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS 296
           +L+ AA+A +T S F VF++PRASPSEFVIP  KYVK++    +S+GMRF+M  E E+S+
Sbjct: 285 ILSPAANALSTKSMFHVFYSPRASPSEFVIPYWKYVKSLSRP-ISIGMRFKMRLEMEDSA 343

Query: 297 VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSL 356
            +R  G ITG  D+DP+RW NS WR + V WD+S+   RQ RVS WEIEP  + P     
Sbjct: 344 EKRCTGAITGACDVDPLRWPNSKWRCLMVRWDDSSLVGRQERVSPWEIEPSLSLPALSCP 403

Query: 357 FPLRLKR 363
              R+KR
Sbjct: 404 VAPRIKR 410


>gi|359386136|gb|AEV43357.1| auxin-response factor [Citrus sinensis]
          Length = 846

 Score =  393 bits (1009), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 194/364 (53%), Positives = 257/364 (70%), Gaps = 3/364 (0%)

Query: 2   IGDNK-CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLP 60
           +GD +  L +ELWHACAGPLV++P  G RV YFPQGH EQV A+TN+  D  +P Y +LP
Sbjct: 38  VGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVY-DLP 96

Query: 61  PQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLT 120
            +++C++ NV + A+ +TDEV+AQ+TL P S +++           P +   + FCKTLT
Sbjct: 97  SKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPPPRFHVHSFCKTLT 156

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
           ASDTSTHGGFSV RR A++  P LD S QPP QEL A+DLH  EW+FRHIFRGQP+RHLL
Sbjct: 157 ASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLL 216

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 240
            +GWSVFVS+KRLVAGD+ +F+  E  +L +G+RRA+R    +PSSV+SS SMH+G+LA 
Sbjct: 217 QSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLAT 276

Query: 241 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 300
           A HA +T + FTV++ PR SPSEF++P  +Y++++     S+GMRF+M FE EE+  +R+
Sbjct: 277 AWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESI-KNNYSIGMRFKMRFEGEEAPEQRF 335

Query: 301 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLR 360
            GTI GI D DP RW +S WR +KV WDE++   R  RVS W+IEP    P   SL   R
Sbjct: 336 TGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSPWKIEPALAPPALNSLPMPR 395

Query: 361 LKRP 364
            KRP
Sbjct: 396 PKRP 399



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 109/234 (46%), Gaps = 31/234 (13%)

Query: 577 PSQVRDFVHSMSL-PSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFTT 635
           PS   +  HS  L P S   +D   G       S++  +FG+ + S+ ++    VS   T
Sbjct: 605 PSNFENSAHSRELMPKSAMVQDQEAGK------SKDCKLFGIPLFSNHVMPEPVVSHRNT 658

Query: 636 SVDPG-------------------VSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLT 676
             +P                     SS    D+   N      Q S     +V    Q  
Sbjct: 659 MNEPAGNLDQQFRAFESDQKSEHSKSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCG 718

Query: 677 PTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRE 735
            TR+  KV K G ++GRS+D+S+F++Y+EL  EL Q+F  +G+   P +  W +V+ D E
Sbjct: 719 STRSCTKVQKQGIALGRSVDLSKFNNYDELIAELDQLFEFDGELMAP-KKNWLIVYTDDE 777

Query: 736 NDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESF---SPSSGQRANSR 786
            D++L+GDDPW+ F   V  I I + E+V KM    + S    SP +G+  +++
Sbjct: 778 GDMMLVGDDPWQEFCGMVRKIFIYTKEEVLKMNSVSLSSKGEDSPMNGEGIDAK 831


>gi|356513463|ref|XP_003525433.1| PREDICTED: auxin response factor 2-like [Glycine max]
          Length = 858

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 193/367 (52%), Positives = 259/367 (70%), Gaps = 11/367 (2%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
            L  ELWHACAGPLV++P  G RV YFPQGH EQV A+TN+  + H+P Y +LPP+++C+
Sbjct: 53  ALYRELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVAEQHMPVY-DLPPKILCR 111

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQP---TNYFCKTLTASD 123
           + NV + A+ +TDEV+AQ+TL P   E  +D     + G P+  P    + FCKTLTASD
Sbjct: 112 VINVMLKAEPDTDEVFAQVTLLP---EPNQDENAVEKEGPPAAPPRFHVHSFCKTLTASD 168

Query: 124 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 183
           TSTHGGFSV RR A++  P LD + QPP QEL+A+DLH  EW+FRHIFRGQP+RHLL +G
Sbjct: 169 TSTHGGFSVLRRHADECLPPLDMTKQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSG 228

Query: 184 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAH 243
           WSVFVS+KRLVAGD+ +F+  E  +L +G+RRA+R    +PSSV+SS SMH+G+LA A H
Sbjct: 229 WSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWH 288

Query: 244 AAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGT 303
           A  T + FTV++ PR SP+EF++P  +Y++++     ++GMRF+M FE EE+  +R+ GT
Sbjct: 289 AILTGTMFTVYYKPRTSPAEFIVPYDQYMESL-KNNYTIGMRFKMRFEGEEAPEQRFTGT 347

Query: 304 ITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKR 363
           I GI D D  RW  S WRS+KV WDE++   R  RVS W+IEP       P+L PL + R
Sbjct: 348 IVGIEDADTKRWPKSKWRSLKVRWDETSNIPRPERVSQWKIEPALA---PPALNPLPMPR 404

Query: 364 PWHPSTS 370
           P  P ++
Sbjct: 405 PKRPRSN 411



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 43/111 (38%), Positives = 65/111 (58%), Gaps = 2/111 (1%)

Query: 658 CMQDSSELLHNVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIE 716
            +Q S   L ++         R+  KV+K G ++GRS+D+++FS Y EL  EL Q+F   
Sbjct: 713 VLQTSQTHLKDIQAKSHSGSARSCTKVHKKGIALGRSVDLTKFSDYGELIAELDQLFEFG 772

Query: 717 GKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           G    P +  W +V+ D E D++L+GDDPW+ FV+ V  I I   E++QKM
Sbjct: 773 GLLTSPQKD-WLIVYTDNEGDMMLVGDDPWQEFVAMVRKIYIYPKEEIQKM 822


>gi|242073172|ref|XP_002446522.1| hypothetical protein SORBIDRAFT_06g017490 [Sorghum bicolor]
 gi|241937705|gb|EES10850.1| hypothetical protein SORBIDRAFT_06g017490 [Sorghum bicolor]
          Length = 661

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 188/343 (54%), Positives = 252/343 (73%), Gaps = 6/343 (1%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           L  ELWHACAGPLV++P  G RV YFPQGH EQ+ A+T++++D ++P + NLPP+++C +
Sbjct: 24  LYRELWHACAGPLVTVPRQGERVYYFPQGHMEQLEASTHQQLDQYLPMF-NLPPKILCSV 82

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTH 127
            NV + A+ ++DEVYAQ+ LQP + + +  +  P E   P K   + FCKTLTASDTSTH
Sbjct: 83  VNVELRAEADSDEVYAQIMLQPEADQNELTSLDP-EPQEPEKCTAHSFCKTLTASDTSTH 141

Query: 128 GGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 187
           GGFSV RR AE+  P LD SL PP QEL+A+DLH  EW FRHIFRGQPKRHLLTTGWSVF
Sbjct: 142 GGFSVLRRHAEECLPQLDMSLNPPCQELVAKDLHGTEWHFRHIFRGQPKRHLLTTGWSVF 201

Query: 188 VSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAAT 247
           VS+KRLVAGD+ +F+  E  +L +G+RR +R    MPSSV+SS SMH+G+LA A+HA +T
Sbjct: 202 VSSKRLVAGDAFIFMRGENGELRVGVRRLMRQVNSMPSSVISSHSMHLGVLATASHAIST 261

Query: 248 NSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGI 307
            + F+VF+ PR S S+F++ + KY++A    ++SVGMRF+M FE +E+  RR+ GTI GI
Sbjct: 262 GTLFSVFYKPRTSRSDFIVSVNKYLEAK-KQKISVGMRFKMRFEGDEAPERRFSGTIIGI 320

Query: 308 SDLDPVR---WSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 347
             L  +    W++S WRS+KV WDE ++  R  R+S WE+EPL
Sbjct: 321 GSLPAMSKSLWADSDWRSLKVQWDEPSSILRPDRISPWEVEPL 363



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 60/91 (65%), Gaps = 2/91 (2%)

Query: 678 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
            R+  KV   G +VGR++D+++ S Y++L ++L +MF I G+    L+  W+++F D E+
Sbjct: 549 VRSCTKVIMQGMAVGRAVDLTKLSGYSDLCQKLEEMFDIHGELGCTLKK-WRVIFTDDED 607

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           D++L+GDDPW+ F   V  I I + E+ +K+
Sbjct: 608 DMMLVGDDPWDEFCRMVKRIYIYTYEEAKKL 638


>gi|350540016|ref|NP_001234871.1| auxin response factor 1 [Solanum lycopersicum]
 gi|299118178|gb|ADJ10892.1| auxin response factor 1 [Solanum lycopersicum]
          Length = 654

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 197/359 (54%), Positives = 255/359 (71%), Gaps = 3/359 (0%)

Query: 5   NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLI 64
           N  L  ELWHACAGPLV++P  G RV YFPQGH EQ+ A+T++ VD H+P++ NLP +++
Sbjct: 20  NNALYKELWHACAGPLVTVPREGERVYYFPQGHMEQLEASTHQGVDQHLPSF-NLPAKIL 78

Query: 65  CQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDT 124
           C++ NV + A+ ETDEVYAQ+TL P  P++ + T     L  P K   + FCKTLTASDT
Sbjct: 79  CKVMNVQLRAESETDEVYAQITLLP-EPDQGEITSPDPPLPEPEKCTVHSFCKTLTASDT 137

Query: 125 STHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 184
           STHGGFSV RR A++  P LD S QPP QEL+A DLH  EW FRHIFRGQP+RHLLTTGW
Sbjct: 138 STHGGFSVLRRHADECLPPLDMSQQPPWQELVASDLHGNEWHFRHIFRGQPRRHLLTTGW 197

Query: 185 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHA 244
           SVFVSAK+LVAGD+ +F+  +  +L +G+RR +R    MPSSV+SS SMH+G+LA A+HA
Sbjct: 198 SVFVSAKKLVAGDAFIFLRGDSGELRVGVRRLMRQLNNMPSSVISSHSMHLGVLATASHA 257

Query: 245 AATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTI 304
             T + F+VF+ PR S SEF++ + KY++A  H ++SVGMRF+M FE EE   RR+ GTI
Sbjct: 258 IMTGTLFSVFYKPRTSQSEFIVSVNKYLEARNH-KLSVGMRFKMRFEGEEVPERRFSGTI 316

Query: 305 TGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKR 363
            G+ D    RW +S WRS+KV WDE ++  R  RVS W++EPL       +  P R KR
Sbjct: 317 VGVGDNPSSRWPDSEWRSLKVHWDEPSSILRPDRVSPWDMEPLVAATPTNTQPPQRNKR 375



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 35/90 (38%), Positives = 59/90 (65%), Gaps = 2/90 (2%)

Query: 679 RTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 737
           R+  KV+  G +VGR++D++R  SY +L ++L  MF IEG+     +  WQ+V+ D E+D
Sbjct: 540 RSCTKVHMQGKAVGRAVDLTRLDSYEDLLKKLEVMFEIEGELRGSTKK-WQVVYTDDEDD 598

Query: 738 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           ++++GDDPW  F S V  I + + E+ +K+
Sbjct: 599 MMMVGDDPWHGFCSMVRKIYVYTAEEAKKL 628


>gi|242065406|ref|XP_002453992.1| hypothetical protein SORBIDRAFT_04g022830 [Sorghum bicolor]
 gi|241933823|gb|EES06968.1| hypothetical protein SORBIDRAFT_04g022830 [Sorghum bicolor]
          Length = 672

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 199/370 (53%), Positives = 262/370 (70%), Gaps = 8/370 (2%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
            L  ELWHACAGPLV++P  G  V YFPQGH EQ+ A+T++++D H+P + NLPP+++C+
Sbjct: 16  ALFRELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQLDQHLPLF-NLPPKILCK 74

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 126
           + NV + A+ ++DEVYAQ+ LQP + E+ + T    E   P +   + FCKTLTASDTST
Sbjct: 75  VVNVELRAETDSDEVYAQIMLQPEA-EQNEPTSPDAEPPEPERCNVHSFCKTLTASDTST 133

Query: 127 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 186
           HGGFSV RR AE+  P LD +  PP QEL+A+DLH  EW FRHIFRGQP+RHLLTTGWSV
Sbjct: 134 HGGFSVLRRHAEECLPQLDMTQNPPWQELVAKDLHGNEWHFRHIFRGQPRRHLLTTGWSV 193

Query: 187 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 246
           FVS+KRLVAGD+ +F+  E  +L +G+RR +R    MPSSV+SS SMH+G+LA A+HA +
Sbjct: 194 FVSSKRLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHSMHLGVLATASHAIS 253

Query: 247 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 306
           T + F+VF+ PR S SEFV+ + KY++A  H ++SVGMRF+M FE +ES  RR+ GTI G
Sbjct: 254 TGTLFSVFYKPRTSRSEFVVSVNKYLEAKNH-KMSVGMRFKMRFEGDESPERRFSGTIIG 312

Query: 307 ISDLDPVR----WSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 362
           +  + P      W+NS WRS+KV WDE +A  R  RVS WE+EPL      P   PLR K
Sbjct: 313 LGSM-PANSTSPWANSEWRSLKVQWDEPSAILRPDRVSPWELEPLDATNPQPPQPPLRNK 371

Query: 363 RPWHPSTSSF 372
           R   P++ S 
Sbjct: 372 RARPPASPSI 381



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 56/91 (61%), Gaps = 2/91 (2%)

Query: 678 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
            R+  KV   G +VGR++D++R   Y++L  +L +MF I G+    LR  W++V+ D E+
Sbjct: 541 VRSCTKVIMQGMAVGRAVDLTRLDGYDDLHRKLEEMFDIHGELSANLRK-WKVVYTDDED 599

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           D++L+GDDPW  F   V  I I S E+ + +
Sbjct: 600 DMMLVGDDPWNEFCRMVKRIYIYSYEEAKSL 630


>gi|356508865|ref|XP_003523174.1| PREDICTED: auxin response factor 2-like [Glycine max]
          Length = 843

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 191/373 (51%), Positives = 261/373 (69%), Gaps = 5/373 (1%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
            L  ELWHACAGPLV++P    RV YFPQGH EQV A+TN+  D H+P Y +LPP+++C+
Sbjct: 35  ALFRELWHACAGPLVTVPRERERVFYFPQGHIEQVEASTNQVADQHMPVY-DLPPKILCR 93

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 126
           + NV + A+ +TDEV+AQ+TL P   +++           P +   + FCKTLTASDTST
Sbjct: 94  VINVQLKAEPDTDEVFAQVTLLPEPNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTST 153

Query: 127 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 186
           HGGFSV RR A++  P LD S QPP QEL+A+DLH  EW+F+HIFRGQP+RHLL +GWSV
Sbjct: 154 HGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHANEWRFKHIFRGQPRRHLLQSGWSV 213

Query: 187 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 246
           FVS+KRLVAGD+ +F+  E  +L +G+RRA+R    +PSSV+SS SMH+G+LA A HA +
Sbjct: 214 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAIS 273

Query: 247 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 306
           T + FTV++ PR SP+EF++P  +Y++++     S+GMRF+M FE EE+  +R+ GTI G
Sbjct: 274 TGTIFTVYYKPRTSPAEFIVPYDQYMESL-KNNYSIGMRFKMRFEGEEAPEQRFTGTIVG 332

Query: 307 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWH 366
           I D DP RW +S WR +KV WDE++   R  RVS W+IEP       P+L PL + RP  
Sbjct: 333 IEDSDPKRWRDSKWRCLKVRWDETSNTPRPERVSPWKIEPALA---PPALNPLSMPRPKR 389

Query: 367 PSTSSFNDNRDET 379
           P +++   + D +
Sbjct: 390 PRSNAVPSSPDSS 402



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 59/91 (64%), Gaps = 2/91 (2%)

Query: 678 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
            R+  KV+K G ++GRS+D++++S Y+EL  EL Q+F   G+     +  W +VF D E 
Sbjct: 712 ARSCTKVHKKGIALGRSVDLTKYSGYDELVAELDQLFEFGGELLS-TKKDWLIVFTDNEG 770

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           D++L+GDDPW+ F + V  I I   E++QKM
Sbjct: 771 DMMLVGDDPWQEFCAMVRKIYIYPKEEIQKM 801


>gi|19352039|dbj|BAB85913.1| auxin response factor 2 [Oryza sativa]
          Length = 791

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 197/361 (54%), Positives = 258/361 (71%), Gaps = 10/361 (2%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           L  ELWHACAGPLV++P VG  V YFPQGH EQV A+ N+  DS +  Y +LP +L+C++
Sbjct: 4   LYDELWHACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVADSQMRLY-DLPSKLLCRV 62

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQK---DTFVPIELGIPSKQPTNYFCKTLTASDT 124
            NV + A+ +TDEVYAQ+ L P  PE+ +   +   P    + ++ P   FCKTLTASDT
Sbjct: 63  LNVELKAEQDTDEVYAQVMLMP-EPEQNEMAVEKTTPTSGPVQARPPVRSFCKTLTASDT 121

Query: 125 STHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 184
           STHGGFSV RR A++  P LD +  PP QEL+A+DLH ++W+FRHIFRGQP+RHLL +GW
Sbjct: 122 STHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHSMDWRFRHIFRGQPRRHLLQSGW 181

Query: 185 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHA 244
           SVFVS+KRLVAGD+ +F+  E  +L +G+RRA+R  + +PSSV+SS SMH+G+LA A HA
Sbjct: 182 SVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVLATAWHA 241

Query: 245 AATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTI 304
             T S FTV++ PR SPSEF+IP  +Y+++V     SVGMRFRM FE EE+  +R+ GTI
Sbjct: 242 INTKSMFTVYYKPRTSPSEFIIPYDQYMESV-KNNYSVGMRFRMRFEGEEAPEQRFTGTI 300

Query: 305 TGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL-RLKR 363
            G  +LDPV W  S WRS+KV WDE +   R  RVS W+IEP ++ P+ P   PL R+KR
Sbjct: 301 IGSENLDPV-WPESSWRSLKVRWDEPSTIPRPDRVSPWKIEPASSPPVNP--LPLSRVKR 357

Query: 364 P 364
           P
Sbjct: 358 P 358



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 74/112 (66%), Gaps = 2/112 (1%)

Query: 660 QDSSELLHNVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGK 718
           Q + +   +V    Q+  TR+  KV+K G ++GRS+D+S+FS+Y+EL+ EL +MF  +G+
Sbjct: 656 QQAQQSSKDVQSKTQVASTRSCTKVHKQGVALGRSVDLSKFSNYDELKAELDKMFEFDGE 715

Query: 719 FEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQ 770
                ++ WQ+V+ D E D++L+GDDPWE F S V  I I + E+VQKM  +
Sbjct: 716 LVSSNKN-WQIVYTDNEGDMMLVGDDPWEEFCSIVRKIYIYTKEEVQKMNSK 766


>gi|357149540|ref|XP_003575147.1| PREDICTED: auxin response factor 7-like [Brachypodium distachyon]
          Length = 672

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 193/366 (52%), Positives = 260/366 (71%), Gaps = 3/366 (0%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
            L  ELWHACAGPLV++P  G RV YFPQGH EQ+ A+T++++D H+P + NLP +++C+
Sbjct: 16  ALYRELWHACAGPLVTVPRQGERVYYFPQGHMEQLEASTDQQLDQHLPLF-NLPSKILCK 74

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 126
           + NV + A+ ++DEVYAQ+ LQP + + +  +  P E   P K   + FCKTLTASDTST
Sbjct: 75  VVNVELRAETDSDEVYAQIMLQPETDQSEPSSADP-EPHEPEKCNAHSFCKTLTASDTST 133

Query: 127 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 186
           HGGFSV RR AE+  P LD +  PP QEL+A+DLH  EW FRHIFRGQP+RHLLTTGWSV
Sbjct: 134 HGGFSVLRRHAEECLPPLDMTQNPPWQELVAKDLHANEWHFRHIFRGQPRRHLLTTGWSV 193

Query: 187 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 246
           FVS+KRLVAGD+ +F+  +   L +G+RR +R    MPSSV+SS SMH+G+LA A+HA +
Sbjct: 194 FVSSKRLVAGDAFIFLRGDNGDLRVGVRRLMRQLNNMPSSVISSHSMHLGVLATASHAIS 253

Query: 247 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 306
           T + F+VF+ PR S SEFV+ + KY++A  + ++SVGMRF+M FE +E+  RR+ GTI G
Sbjct: 254 TGTLFSVFYKPRTSRSEFVVSVNKYLEAK-NNKMSVGMRFKMRFEGDEAPERRFSGTIIG 312

Query: 307 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWH 366
           +  +    W++S WRS+KV WDE +A  R  RVS WE+EPL    + P   P R KR   
Sbjct: 313 VGSMTTSPWADSDWRSLKVQWDEPSAIPRPDRVSPWELEPLVATSIQPPQPPARNKRARP 372

Query: 367 PSTSSF 372
           P++ S 
Sbjct: 373 PASPSI 378



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 64/107 (59%), Gaps = 7/107 (6%)

Query: 678 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
            R+  KV   G +VGR++D++R   Y +L ++L +MF I+G+    L+  W+LV+ D E+
Sbjct: 540 VRSCTKVIMEGMAVGRAVDLTRLHGYEDLHQKLEEMFDIQGELSASLKK-WKLVYTDDED 598

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG-----VESFSPS 778
           D++L+GDDPW  F S V  + I S E+ + +  +      V++  PS
Sbjct: 599 DMMLVGDDPWSEFCSMVKKVYIYSYEEAKHLTPKAKLPVVVDAIKPS 645


>gi|115441981|ref|NP_001045270.1| Os01g0927600 [Oryza sativa Japonica Group]
 gi|75222728|sp|Q5JK20.1|ARFD_ORYSJ RecName: Full=Auxin response factor 4; AltName: Full=OsARF2
 gi|57900138|dbj|BAD88200.1| putative auxin response factor [Oryza sativa Japonica Group]
 gi|113534801|dbj|BAF07184.1| Os01g0927600 [Oryza sativa Japonica Group]
          Length = 808

 Score =  391 bits (1004), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 197/361 (54%), Positives = 258/361 (71%), Gaps = 10/361 (2%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           L  ELWHACAGPLV++P VG  V YFPQGH EQV A+ N+  DS +  Y +LP +L+C++
Sbjct: 21  LYDELWHACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVADSQMRLY-DLPSKLLCRV 79

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQK---DTFVPIELGIPSKQPTNYFCKTLTASDT 124
            NV + A+ +TDEVYAQ+ L P  PE+ +   +   P    + ++ P   FCKTLTASDT
Sbjct: 80  LNVELKAEQDTDEVYAQVMLMP-EPEQNEMAVEKTTPTSGPVQARPPVRSFCKTLTASDT 138

Query: 125 STHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 184
           STHGGFSV RR A++  P LD +  PP QEL+A+DLH ++W+FRHIFRGQP+RHLL +GW
Sbjct: 139 STHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHSMDWRFRHIFRGQPRRHLLQSGW 198

Query: 185 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHA 244
           SVFVS+KRLVAGD+ +F+  E  +L +G+RRA+R  + +PSSV+SS SMH+G+LA A HA
Sbjct: 199 SVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVLATAWHA 258

Query: 245 AATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTI 304
             T S FTV++ PR SPSEF+IP  +Y+++V     SVGMRFRM FE EE+  +R+ GTI
Sbjct: 259 INTKSMFTVYYKPRTSPSEFIIPYDQYMESV-KNNYSVGMRFRMRFEGEEAPEQRFTGTI 317

Query: 305 TGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL-RLKR 363
            G  +LDPV W  S WRS+KV WDE +   R  RVS W+IEP ++ P+ P   PL R+KR
Sbjct: 318 IGSENLDPV-WPESSWRSLKVRWDEPSTIPRPDRVSPWKIEPASSPPVNP--LPLSRVKR 374

Query: 364 P 364
           P
Sbjct: 375 P 375



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 74/112 (66%), Gaps = 2/112 (1%)

Query: 660 QDSSELLHNVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGK 718
           Q + +   +V    Q+  TR+  KV+K G ++GRS+D+S+FS+Y+EL+ EL +MF  +G+
Sbjct: 673 QQAQQSSKDVQSKTQVASTRSCTKVHKQGVALGRSVDLSKFSNYDELKAELDKMFEFDGE 732

Query: 719 FEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQ 770
                ++ WQ+V+ D E D++L+GDDPWE F S V  I I + E+VQKM  +
Sbjct: 733 LVSSNKN-WQIVYTDNEGDMMLVGDDPWEEFCSIVRKIYIYTKEEVQKMNSK 783


>gi|297793759|ref|XP_002864764.1| hypothetical protein ARALYDRAFT_919450 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297310599|gb|EFH41023.1| hypothetical protein ARALYDRAFT_919450 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 858

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 191/364 (52%), Positives = 256/364 (70%), Gaps = 5/364 (1%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
            L  ELWHACAGPLV++P    RV YFPQGH EQV A+TN+  +  +P Y +LP +L+C+
Sbjct: 53  ALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLY-DLPSKLLCR 111

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 126
           + NV + A+ +TDEVYAQ+TL P + +++           P +   + FCKTLTASDTST
Sbjct: 112 VINVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPPPPPPRFQVHSFCKTLTASDTST 171

Query: 127 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 186
           HGGFSV RR A++  P LD S QPP QEL+A+DLH  EW+FRHIFRGQP+RHLL +GWSV
Sbjct: 172 HGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSV 231

Query: 187 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 246
           FVS+KRLVAGD+ +F+  E  +L +G+RRA+R    +PSSV+SS SMH+G+LA A HA +
Sbjct: 232 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAIS 291

Query: 247 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 306
           T + FTV++ PR SPSEF++P  +Y+++V     S+GMRF+M FE EE+  +R+ GTI G
Sbjct: 292 TGTMFTVYYKPRTSPSEFIVPFDQYMESV-KNNYSIGMRFKMRFEGEEAPEQRFTGTIVG 350

Query: 307 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWH 366
           I D D  RW  S WRS+KV WDE+++  R  RVS W+IEP       P+L P+ + RP  
Sbjct: 351 IEDSDITRWPKSKWRSLKVRWDETSSIPRPDRVSPWKIEPALA---PPALSPVPMPRPKR 407

Query: 367 PSTS 370
           P ++
Sbjct: 408 PRSN 411



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 61/91 (67%), Gaps = 2/91 (2%)

Query: 678 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           +R+  KV+K G ++GRS+D+S+F +Y EL  EL ++F   G+   P +  W +V+ D EN
Sbjct: 732 SRSCTKVHKQGIALGRSVDLSKFQNYEELIAELDRLFEFNGELMAP-KKDWLIVYTDDEN 790

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           D++L+GDDPW+ F   V  I I + E+V+KM
Sbjct: 791 DMMLVGDDPWQEFCCMVRKIFIYTKEEVRKM 821


>gi|356516493|ref|XP_003526928.1| PREDICTED: auxin response factor 2-like [Glycine max]
          Length = 843

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 190/373 (50%), Positives = 262/373 (70%), Gaps = 5/373 (1%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
            L  ELWHACAGPLV++P    RV YFPQGH EQV A+TN+  D H+P Y +LPP+++C+
Sbjct: 35  ALFRELWHACAGPLVTVPREKERVFYFPQGHIEQVEASTNQVADQHMPVY-DLPPKILCR 93

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 126
           + NV + A+ +TDEV+AQ+TL P   +++           P +   + FCKTLTASDTST
Sbjct: 94  VINVQLKAEPDTDEVFAQVTLLPEPNQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTST 153

Query: 127 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 186
           HGGFSV RR A++  P LD S QPP QEL+A+DLH  EW+F+HIFRGQP+RHLL +GWSV
Sbjct: 154 HGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHANEWRFKHIFRGQPRRHLLQSGWSV 213

Query: 187 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 246
           FVS+KRLVAGD+ +F+  E  +L +G+RRA+R    +PSSV+SS SMH+G+LA A HA  
Sbjct: 214 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAIL 273

Query: 247 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 306
           T + FTV++ PR SP+EF++P  +Y++++ ++  S+GMRF+M FE EE+  +R+ GT+ G
Sbjct: 274 TGTIFTVYYKPRTSPAEFIVPYDQYMESLKNS-YSIGMRFKMRFEGEEAPEQRFTGTVVG 332

Query: 307 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWH 366
           I D DP RW +S WR +KV WDE++   R  RVS W+IEP       P+L PL + RP  
Sbjct: 333 IEDSDPKRWRDSKWRCLKVRWDETSNTPRPERVSPWKIEPALA---PPALNPLSMPRPKR 389

Query: 367 PSTSSFNDNRDET 379
           P +++   + D +
Sbjct: 390 PRSNAVPSSPDSS 402



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 59/91 (64%), Gaps = 2/91 (2%)

Query: 678 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
            R+  KV+K G ++GRS+D++++S Y+EL  EL Q+F   G+     +  W +V+ D E 
Sbjct: 712 ARSCTKVHKKGIALGRSVDLTKYSGYDELVAELDQLFEFGGELLS-TKKDWLIVYTDNEG 770

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           D++L+GDDPW+ F + V  I I   E++QKM
Sbjct: 771 DMMLVGDDPWQEFCAMVCKIYIYPKEEIQKM 801


>gi|218189656|gb|EEC72083.1| hypothetical protein OsI_05027 [Oryza sativa Indica Group]
          Length = 803

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 197/361 (54%), Positives = 258/361 (71%), Gaps = 10/361 (2%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           L  ELWHACAGPLV++P VG  V YFPQGH EQV A+ N+  DS +  Y +LP +L+C++
Sbjct: 16  LYDELWHACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVADSQMRLY-DLPSKLLCRV 74

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQK---DTFVPIELGIPSKQPTNYFCKTLTASDT 124
            NV + A+ +TDEVYAQ+ L P  PE+ +   +   P    + ++ P   FCKTLTASDT
Sbjct: 75  LNVELKAEQDTDEVYAQVMLMP-EPEQNEMAVEKTTPTSGPVQARPPVRSFCKTLTASDT 133

Query: 125 STHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 184
           STHGGFSV RR A++  P LD +  PP QEL+A+DLH ++W+FRHIFRGQP+RHLL +GW
Sbjct: 134 STHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHSMDWRFRHIFRGQPRRHLLQSGW 193

Query: 185 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHA 244
           SVFVS+KRLVAGD+ +F+  E  +L +G+RRA+R  + +PSSV+SS SMH+G+LA A HA
Sbjct: 194 SVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVLATAWHA 253

Query: 245 AATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTI 304
             T S FTV++ PR SPSEF+IP  +Y+++V     SVGMRFRM FE EE+  +R+ GTI
Sbjct: 254 INTKSMFTVYYKPRTSPSEFIIPYDQYMESV-KNNYSVGMRFRMRFEGEEAPEQRFTGTI 312

Query: 305 TGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL-RLKR 363
            G  +LDPV W  S WRS+KV WDE +   R  RVS W+IEP ++ P+ P   PL R+KR
Sbjct: 313 IGSENLDPV-WPESSWRSLKVRWDEPSTIPRPDRVSPWKIEPASSPPVNP--LPLSRVKR 369

Query: 364 P 364
           P
Sbjct: 370 P 370



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 74/112 (66%), Gaps = 2/112 (1%)

Query: 660 QDSSELLHNVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGK 718
           Q + +   +V    Q+  TR+  KV+K G ++GRS+D+S+FS+Y+EL+ EL +MF  +G+
Sbjct: 668 QQAQQSSKDVQSKTQVASTRSCTKVHKQGVALGRSVDLSKFSNYDELKAELDKMFEFDGE 727

Query: 719 FEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQ 770
                ++ WQ+V+ D E D++L+GDDPWE F S V  I I + E+VQKM  +
Sbjct: 728 LVSSNKN-WQIVYTDNEGDMMLVGDDPWEEFCSIVRKIYIYTKEEVQKMNSK 778


>gi|38346580|emb|CAE04227.2| OSJNBa0064D20.11 [Oryza sativa Japonica Group]
 gi|222628930|gb|EEE61062.1| hypothetical protein OsJ_14920 [Oryza sativa Japonica Group]
          Length = 669

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 198/375 (52%), Positives = 261/375 (69%), Gaps = 9/375 (2%)

Query: 3   GDNKC---LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNL 59
           G   C   L  ELWHACAGPLV++P  G RV YFPQGH EQ+ A+TN+++D ++P + NL
Sbjct: 9   GSGTCSDALFRELWHACAGPLVTVPKRGERVYYFPQGHMEQLEASTNQQLDQYLPMF-NL 67

Query: 60  PPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTL 119
           P +++C + NV + A+ ++DEVYAQ+ LQP + + +  +  P EL    K   + FCKTL
Sbjct: 68  PSKILCSVVNVELRAEADSDEVYAQIMLQPEADQSELTSLDP-ELQDLEKCTAHSFCKTL 126

Query: 120 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 179
           TASDTSTHGGFSV RR AE+  P LD S  PP QEL+A+DLH  EW FRHIFRGQP+RHL
Sbjct: 127 TASDTSTHGGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRHIFRGQPRRHL 186

Query: 180 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLA 239
           LTTGWSVFVS+KRLVAGD+ +F+  E  +L +G+RR +R    MPSSV+SS SMH+G+LA
Sbjct: 187 LTTGWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRLMRQVNNMPSSVISSHSMHLGVLA 246

Query: 240 AAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRR 299
            A+HA +T + F+VF+ PR S SEFV+ + KY++A     +SVGMRF+M FE +E+  RR
Sbjct: 247 TASHAISTGTLFSVFYKPRTSRSEFVVSVNKYLEAK-KQNLSVGMRFKMRFEGDEAPERR 305

Query: 300 YMGTITGISDLDPVR---WSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSL 356
           + GTI GI  +  +    W++S W+S+KV WDE +A  R  RVS WE+EPL      P  
Sbjct: 306 FSGTIIGIGSVPAMSKSPWADSDWKSLKVQWDEPSAIVRPDRVSPWELEPLDASNPQPPQ 365

Query: 357 FPLRLKRPWHPSTSS 371
            PLR KR   P++ S
Sbjct: 366 PPLRNKRARPPASPS 380



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 59/92 (64%), Gaps = 2/92 (2%)

Query: 678 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
            R+  KV   G +VGR++D+++ + Y +LR +L +MF I+G     L+  WQ+V+ D E+
Sbjct: 542 VRSCTKVIMQGMAVGRAVDLTKLNGYGDLRSKLEEMFDIQGDLCPTLKR-WQVVYTDDED 600

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKMG 768
           D++L+GDDPW+ F S V  I I S E+ + + 
Sbjct: 601 DMMLVGDDPWDEFCSMVKRIYIYSYEEAKLLA 632


>gi|115458558|ref|NP_001052879.1| Os04g0442000 [Oryza sativa Japonica Group]
 gi|122240925|sp|Q0JCZ4.1|ARFI_ORYSJ RecName: Full=Auxin response factor 9
 gi|113564450|dbj|BAF14793.1| Os04g0442000 [Oryza sativa Japonica Group]
          Length = 673

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 198/375 (52%), Positives = 261/375 (69%), Gaps = 9/375 (2%)

Query: 3   GDNKC---LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNL 59
           G   C   L  ELWHACAGPLV++P  G RV YFPQGH EQ+ A+TN+++D ++P + NL
Sbjct: 13  GSGTCSDALFRELWHACAGPLVTVPKRGERVYYFPQGHMEQLEASTNQQLDQYLPMF-NL 71

Query: 60  PPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTL 119
           P +++C + NV + A+ ++DEVYAQ+ LQP + + +  +  P EL    K   + FCKTL
Sbjct: 72  PSKILCSVVNVELRAEADSDEVYAQIMLQPEADQSELTSLDP-ELQDLEKCTAHSFCKTL 130

Query: 120 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 179
           TASDTSTHGGFSV RR AE+  P LD S  PP QEL+A+DLH  EW FRHIFRGQP+RHL
Sbjct: 131 TASDTSTHGGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRHIFRGQPRRHL 190

Query: 180 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLA 239
           LTTGWSVFVS+KRLVAGD+ +F+  E  +L +G+RR +R    MPSSV+SS SMH+G+LA
Sbjct: 191 LTTGWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRLMRQVNNMPSSVISSHSMHLGVLA 250

Query: 240 AAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRR 299
            A+HA +T + F+VF+ PR S SEFV+ + KY++A     +SVGMRF+M FE +E+  RR
Sbjct: 251 TASHAISTGTLFSVFYKPRTSRSEFVVSVNKYLEAK-KQNLSVGMRFKMRFEGDEAPERR 309

Query: 300 YMGTITGISDLDPVR---WSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSL 356
           + GTI GI  +  +    W++S W+S+KV WDE +A  R  RVS WE+EPL      P  
Sbjct: 310 FSGTIIGIGSVPAMSKSPWADSDWKSLKVQWDEPSAIVRPDRVSPWELEPLDASNPQPPQ 369

Query: 357 FPLRLKRPWHPSTSS 371
            PLR KR   P++ S
Sbjct: 370 PPLRNKRARPPASPS 384



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 59/92 (64%), Gaps = 2/92 (2%)

Query: 678 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
            R+  KV   G +VGR++D+++ + Y +LR +L +MF I+G     L+  WQ+V+ D E+
Sbjct: 546 VRSCTKVIMQGMAVGRAVDLTKLNGYGDLRSKLEEMFDIQGDLCPTLKR-WQVVYTDDED 604

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKMG 768
           D++L+GDDPW+ F S V  I I S E+ + + 
Sbjct: 605 DMMLVGDDPWDEFCSMVKRIYIYSYEEAKLLA 636


>gi|225456475|ref|XP_002284543.1| PREDICTED: auxin response factor 2 [Vitis vinifera]
 gi|297734502|emb|CBI15749.3| unnamed protein product [Vitis vinifera]
          Length = 862

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 191/364 (52%), Positives = 257/364 (70%), Gaps = 5/364 (1%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
            L +ELWHACAGPLV++P    RV YFPQGH EQV A+TN+  D  +P Y +LP +++C+
Sbjct: 56  ALYTELWHACAGPLVTVPRERERVFYFPQGHIEQVEASTNQVSDQQMPVY-DLPSKILCR 114

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 126
           + NV + A+ +TDEV+AQ+TL P   +++           P +   + FCKTLTASDTST
Sbjct: 115 VINVQLKAEPDTDEVFAQVTLLPEPNQDETAQEKEPLPPPPPRFHVHSFCKTLTASDTST 174

Query: 127 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 186
           HGGFSV RR A++  P LD S QPP QEL+A+DLH  EW+FRHIFRGQP+RHLL +GWSV
Sbjct: 175 HGGFSVLRRHADECLPQLDMSRQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 234

Query: 187 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 246
           FVS+KRLVAGD+ +F+  E  +L +G+RRA+R    +PSSV+SS SMH+G+LA A HA +
Sbjct: 235 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAKS 294

Query: 247 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 306
           T + FTV++ PR SP+EF++P  +Y+++V     S+GMRF+M FE EE+  +R+ GTI G
Sbjct: 295 TGTMFTVYYKPRTSPAEFIVPFDQYMESV-KNNYSIGMRFKMRFEGEEAPEQRFTGTIVG 353

Query: 307 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWH 366
           I D DP RW +S WR +KV WDE++   R  RVS W+IEP  T    P+L PL + RP  
Sbjct: 354 IEDADPKRWRDSKWRCLKVRWDETSTIPRPDRVSPWKIEPAVT---PPALNPLPVPRPKR 410

Query: 367 PSTS 370
           P ++
Sbjct: 411 PRSN 414



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 44/109 (40%), Positives = 68/109 (62%), Gaps = 2/109 (1%)

Query: 660 QDSSELLHNVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGK 718
           Q S  L  +V    Q   TR+  KV+K G ++GRS+D+++F++Y+EL  EL Q+F   G+
Sbjct: 717 QTSLPLSRDVQGKVQSVSTRSCTKVHKQGIALGRSVDLTKFNNYDELIAELDQLFEFGGE 776

Query: 719 FEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
              P +  W +V+ D E D++L+GDDPW+ F   V  I I + E+VQ+M
Sbjct: 777 LMAP-KKNWLIVYTDDEGDMMLVGDDPWQEFCGMVRKIYIYTREEVQRM 824


>gi|218190977|gb|EEC73404.1| hypothetical protein OsI_07659 [Oryza sativa Indica Group]
          Length = 678

 Score =  389 bits (1000), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 196/366 (53%), Positives = 260/366 (71%), Gaps = 4/366 (1%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           L  ELWHACAGPLV++P  G  V YFPQGH EQ+ A+T++++D H+P + NLP +++C++
Sbjct: 23  LYRELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQLDQHLPLF-NLPSKILCKV 81

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTH 127
            NV + A+ ++DEVYAQ+ LQP + + +  +  P E   P K   + FCKTLTASDTSTH
Sbjct: 82  VNVELRAETDSDEVYAQIMLQPEADQNELTSPKP-EPHEPEKCNVHSFCKTLTASDTSTH 140

Query: 128 GGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 187
           GGFSV RR AE+  P LD +  PP QEL+ARDLH  EW FRHIFRGQP+RHLLTTGWSVF
Sbjct: 141 GGFSVLRRHAEECLPPLDMTQNPPWQELVARDLHGNEWHFRHIFRGQPRRHLLTTGWSVF 200

Query: 188 VSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAAT 247
           VS+KRLVAGD+ +F+  E  +L +G+RR +R    MPSSV+SS SMH+G+LA A+HA +T
Sbjct: 201 VSSKRLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHSMHLGVLATASHAIST 260

Query: 248 NSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGI 307
            + F+VF+ PR S SEFV+   KY++A  ++++SVGMRF+M FE +E+  RR+ GTI G+
Sbjct: 261 GTLFSVFYKPRTSQSEFVVSANKYLEAK-NSKISVGMRFKMRFEGDEAPERRFSGTIIGV 319

Query: 308 SDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS-LFPLRLKRPWH 366
             +    W+NS WRS+KV WDE +   R  RVS WE+EPL      PS   P R KR   
Sbjct: 320 GSMSTSPWANSDWRSLKVQWDEPSVVPRPDRVSPWELEPLAVSNSQPSPQPPARNKRARP 379

Query: 367 PSTSSF 372
           P++SS 
Sbjct: 380 PASSSI 385



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 60/91 (65%), Gaps = 2/91 (2%)

Query: 678 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
            R+  KV   G +VGR++D++R   Y++LR +L +MF I+G+    L+  W++V+ D E+
Sbjct: 547 VRSCTKVIMQGMAVGRAVDLTRLHGYDDLRCKLEEMFDIQGELSASLKK-WKVVYTDDED 605

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           D++L+GDDPW  F S V  I I + E+ +++
Sbjct: 606 DMMLVGDDPWPEFCSMVKRIYIYTYEEAKQL 636


>gi|32479677|emb|CAE02512.1| P0076O17.10 [Oryza sativa Japonica Group]
          Length = 1673

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 198/375 (52%), Positives = 261/375 (69%), Gaps = 9/375 (2%)

Query: 3   GDNKC---LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNL 59
           G   C   L  ELWHACAGPLV++P  G RV YFPQGH EQ+ A+TN+++D ++P + NL
Sbjct: 9   GSGTCSDALFRELWHACAGPLVTVPKRGERVYYFPQGHMEQLEASTNQQLDQYLPMF-NL 67

Query: 60  PPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTL 119
           P +++C + NV + A+ ++DEVYAQ+ LQP + + +  +  P EL    K   + FCKTL
Sbjct: 68  PSKILCSVVNVELRAEADSDEVYAQIMLQPEADQSELTSLDP-ELQDLEKCTAHSFCKTL 126

Query: 120 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 179
           TASDTSTHGGFSV RR AE+  P LD S  PP QEL+A+DLH  EW FRHIFRGQP+RHL
Sbjct: 127 TASDTSTHGGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRHIFRGQPRRHL 186

Query: 180 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLA 239
           LTTGWSVFVS+KRLVAGD+ +F+  E  +L +G+RR +R    MPSSV+SS SMH+G+LA
Sbjct: 187 LTTGWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRLMRQVNNMPSSVISSHSMHLGVLA 246

Query: 240 AAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRR 299
            A+HA +T + F+VF+ PR S SEFV+ + KY++A     +SVGMRF+M FE +E+  RR
Sbjct: 247 TASHAISTGTLFSVFYKPRTSRSEFVVSVNKYLEAKKQN-LSVGMRFKMRFEGDEAPERR 305

Query: 300 YMGTITGISDLDPVR---WSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSL 356
           + GTI GI  +  +    W++S W+S+KV WDE +A  R  RVS WE+EPL      P  
Sbjct: 306 FSGTIIGIGSVPAMSKSPWADSDWKSLKVQWDEPSAIVRPDRVSPWELEPLDASNPQPPQ 365

Query: 357 FPLRLKRPWHPSTSS 371
            PLR KR   P++ S
Sbjct: 366 PPLRNKRARPPASPS 380



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 34/88 (38%), Positives = 55/88 (62%), Gaps = 4/88 (4%)

Query: 678 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
            R+  KV   G +VGR++D+++ + Y +LR +L +MF I+G     L+  WQ+V+ D E+
Sbjct: 424 VRSCTKVIMQGMAVGRAVDLTKLNGYGDLRSKLEEMFDIQGDLCPTLKR-WQVVYTDDED 482

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPEDV 764
           D++L+GDDPWE F    ++I     ED 
Sbjct: 483 DMMLVGDDPWEKF--QCFFITASCAEDA 508


>gi|147791931|emb|CAN67897.1| hypothetical protein VITISV_040395 [Vitis vinifera]
          Length = 946

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 191/363 (52%), Positives = 257/363 (70%), Gaps = 5/363 (1%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           L +ELWHACAGPLV++P    RV YFPQGH EQV A+TN+  D  +P Y +LP +++C++
Sbjct: 57  LYTELWHACAGPLVTVPRERERVFYFPQGHIEQVEASTNQVSDQQMPVY-DLPSKILCRV 115

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTH 127
            NV + A+ +TDEV+AQ+TL P   +++           P +   + FCKTLTASDTSTH
Sbjct: 116 INVQLKAEPDTDEVFAQVTLLPEPNQDETAQEKEPLPPPPPRFHVHSFCKTLTASDTSTH 175

Query: 128 GGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 187
           GGFSV RR A++  P LD S QPP QEL+A+DLH  EW+FRHIFRGQP+RHLL +GWSVF
Sbjct: 176 GGFSVLRRHADECLPQLDMSRQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 235

Query: 188 VSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAAT 247
           VS+KRLVAGD+ +F+  E  +L +G+RRA+R    +PSSV+SS SMH+G+LA A HA +T
Sbjct: 236 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAKST 295

Query: 248 NSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGI 307
            + FTV++ PR SP+EF++P  +Y+++V     S+GMRF+M FE EE+  +R+ GTI GI
Sbjct: 296 GTMFTVYYKPRTSPAEFIVPFDQYMESV-KNNYSIGMRFKMRFEGEEAPEQRFTGTIVGI 354

Query: 308 SDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWHP 367
            D DP RW +S WR +KV WDE++   R  RVS W+IEP  T    P+L PL + RP  P
Sbjct: 355 EDADPKRWRDSKWRCLKVRWDETSTIPRPDRVSPWKIEPAVT---PPALNPLPVPRPKRP 411

Query: 368 STS 370
            ++
Sbjct: 412 RSN 414



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 36/85 (42%), Positives = 58/85 (68%), Gaps = 2/85 (2%)

Query: 684 VYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLG 742
           V+K G ++GRS+D+++F++Y+EL  EL Q+F   G+   P +  W +V+ D E D++L+G
Sbjct: 786 VHKQGIALGRSVDLTKFNNYDELIAELDQLFEFGGELMAP-KKNWLIVYTDDEGDMMLVG 844

Query: 743 DDPWEAFVSNVWYIKILSPEDVQKM 767
           DDPW+ F   V  I I + E+VQ+M
Sbjct: 845 DDPWQEFCGMVRKIYIYTREEVQRM 869


>gi|301793217|emb|CBA11999.1| putative auxin response factor 1 [Illicium parviflorum]
          Length = 684

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 198/368 (53%), Positives = 259/368 (70%), Gaps = 5/368 (1%)

Query: 2   IGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 61
           +     L  ELWHACAGPLV++P  G RV YFPQGH EQ+ A+TN+  D  +P + +LP 
Sbjct: 16  VAYKDALYQELWHACAGPLVTVPREGERVYYFPQGHMEQLEASTNQGADQQMPLF-SLPA 74

Query: 62  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTA 121
           +++C++ +V + A+ ETDEVYAQ+TL P  PE+ + T     +  P +   + FCKTLTA
Sbjct: 75  KILCRVVHVQLRAEPETDEVYAQITLLP-EPEQGEITSPDPPIPEPPRCTVHSFCKTLTA 133

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSV RR A++  P LD S  PP QEL+A DLH  EW FRHIFRGQP+RHLLT
Sbjct: 134 SDTSTHGGFSVLRRHADECLPQLDMSQHPPWQELVATDLHGNEWHFRHIFRGQPRRHLLT 193

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWSVFVS+KRLVAGD+ +F+  E  +L +G+RR +R P+ MPSSV+SS SMH+G+LA A
Sbjct: 194 TGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRLMRQPSNMPSSVISSHSMHLGVLATA 253

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           +HA +T + F+VF+ PR S SEF+I L KY++A  H ++SVGMRF+M FE E++  RR+ 
Sbjct: 254 SHAISTGTLFSVFYKPRTSQSEFIISLNKYLEAKNH-KLSVGMRFKMRFEGEDAPERRFS 312

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL-TTFPMYPSLFPLR 360
           GTI G+ D    RW++S WRS+KV WDE ++  R  RVS WE+EPL    P  P   P R
Sbjct: 313 GTIIGVGDAVSSRWADSEWRSLKVQWDEPSSIPRPVRVSPWELEPLVAAVPSAPQPTP-R 371

Query: 361 LKRPWHPS 368
            KR   P+
Sbjct: 372 SKRARPPA 379



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 59/91 (64%), Gaps = 2/91 (2%)

Query: 678 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           TR+  KV+  G +VGR++D+SR   Y +L  +L QMF IEG+   P +  WQLV+ D E+
Sbjct: 555 TRSCTKVHLQGMAVGRAVDLSRLDCYEDLLNKLEQMFNIEGELSGPTKK-WQLVYTDDED 613

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           D +L+GDDPW  F   V  I I +PE+V+ +
Sbjct: 614 DTMLVGDDPWHEFCGIVRKINIYTPEEVKNL 644


>gi|115446715|ref|NP_001047137.1| Os02g0557200 [Oryza sativa Japonica Group]
 gi|75225108|sp|Q6YVY0.1|ARFG_ORYSJ RecName: Full=Auxin response factor 7
 gi|46390905|dbj|BAD16420.1| putative auxin-responsive factor (ARF1) [Oryza sativa Japonica
           Group]
 gi|113536668|dbj|BAF09051.1| Os02g0557200 [Oryza sativa Japonica Group]
 gi|222623062|gb|EEE57194.1| hypothetical protein OsJ_07141 [Oryza sativa Japonica Group]
          Length = 678

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 195/366 (53%), Positives = 260/366 (71%), Gaps = 4/366 (1%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           L  ELWHACAGPLV++P  G  V YFPQGH EQ+ A+T++++D H+P + NLP +++C++
Sbjct: 23  LYRELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQLDQHLPLF-NLPSKILCKV 81

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTH 127
            NV + A+ ++DEVYAQ+ LQP + + +  +  P E   P K   + FCKTLTASDTSTH
Sbjct: 82  VNVELRAETDSDEVYAQIMLQPEADQNELTSPKP-EPHEPEKCNVHSFCKTLTASDTSTH 140

Query: 128 GGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 187
           GGFSV RR AE+  P LD +  PP QEL+ARDLH  EW FRHIFRGQP+RHLLTTGWSVF
Sbjct: 141 GGFSVLRRHAEECLPPLDMTQNPPWQELVARDLHGNEWHFRHIFRGQPRRHLLTTGWSVF 200

Query: 188 VSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAAT 247
           VS+KRLVAGD+ +F+  E  +L +G+RR +R    MPSSV+SS SMH+G+LA A+HA +T
Sbjct: 201 VSSKRLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHSMHLGVLATASHAIST 260

Query: 248 NSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGI 307
            + F+VF+ PR S SEFV+   KY++A  ++++SVGMRF+M FE +E+  RR+ GTI G+
Sbjct: 261 GTLFSVFYKPRTSQSEFVVSANKYLEAK-NSKISVGMRFKMRFEGDEAPERRFSGTIIGV 319

Query: 308 SDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS-LFPLRLKRPWH 366
             +    W+NS WRS+KV WDE +   R  RVS WE+EPL      PS   P R KR   
Sbjct: 320 GSMSTSPWANSDWRSLKVQWDEPSVVPRPDRVSPWELEPLAVSNSQPSPQPPARNKRARP 379

Query: 367 PSTSSF 372
           P+++S 
Sbjct: 380 PASNSI 385



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 60/91 (65%), Gaps = 2/91 (2%)

Query: 678 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
            R+  KV   G +VGR++D++R   Y++LR +L +MF I+G+    L+  W++V+ D E+
Sbjct: 547 VRSCTKVIMQGMAVGRAVDLTRLHGYDDLRCKLEEMFDIQGELSASLKK-WKVVYTDDED 605

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           D++L+GDDPW  F S V  I I + E+ +++
Sbjct: 606 DMMLVGDDPWPEFCSMVKRIYIYTYEEAKQL 636


>gi|225425242|ref|XP_002268849.1| PREDICTED: auxin response factor 2-like [Vitis vinifera]
          Length = 769

 Score =  387 bits (995), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 197/387 (50%), Positives = 268/387 (69%), Gaps = 10/387 (2%)

Query: 2   IGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 61
           +     L  ELWHACAGPLV++P VG RV YFPQGH EQV A+TN+  D  +P Y +L  
Sbjct: 4   VDSEDALYKELWHACAGPLVTVPRVGERVFYFPQGHLEQVEASTNQVADQQMPAY-DLRA 62

Query: 62  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQP-TNYFCKTLT 120
           +++C++ NV + A+ +TDEV+AQ+TL P  P++ +++    ++  P+ +P  + FCKTLT
Sbjct: 63  KILCRVINVHLKAESDTDEVFAQVTLLP-EPKQDENSAEKEDVLTPTPRPRVHSFCKTLT 121

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
           ASDTSTHGGFSV RR A++  P LD S QPP QEL+A+DLH  EW+FRHIFRGQP+RHLL
Sbjct: 122 ASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLL 181

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 240
            +GWS+FVS+K+LVAGD+ +F+  E  +L +G+RRA+R  +  PSSV+SS SMH+G+LA 
Sbjct: 182 QSGWSLFVSSKKLVAGDAFIFLRGENGELRVGVRRAMRQLSNGPSSVISSHSMHLGVLAT 241

Query: 241 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 300
           A HA +T + FTV++ PR SP+EF+IP  +Y++AV     S+GMRF+M FE EE+  +R+
Sbjct: 242 AWHAVSTGTIFTVYYKPRTSPAEFIIPFDQYMEAV-KNHYSIGMRFKMKFEGEEAPEQRF 300

Query: 301 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL- 359
            GT+ G  D DP+RW  S WR +KV WDE+++  R   VS W IE   T    PSL PL 
Sbjct: 301 TGTVIGTEDADPMRWPGSKWRCLKVRWDETSSVPRPECVSPWNIEVALT---PPSLNPLP 357

Query: 360 --RLKRPWHPSTSSFNDNRDETASGLN 384
             R KRP     SS  ++   T  GL+
Sbjct: 358 VSRSKRPRANMMSSSTESSVLTREGLS 384



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 60/91 (65%), Gaps = 2/91 (2%)

Query: 678 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           TR+ +KV+K G +VGRS+D+++F+ Y EL  EL Q+F   G+    L   W +VF D E 
Sbjct: 637 TRSCIKVHKQGIAVGRSVDLTKFNGYTELISELDQIFEFNGELIS-LNKDWLIVFTDDEG 695

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           D++L+GDDPW  F S V  I + + E++Q+M
Sbjct: 696 DMMLVGDDPWPEFCSMVRKIFVYTREEIQRM 726


>gi|224119856|ref|XP_002331079.1| predicted protein [Populus trichocarpa]
 gi|222872807|gb|EEF09938.1| predicted protein [Populus trichocarpa]
          Length = 660

 Score =  387 bits (994), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 197/362 (54%), Positives = 254/362 (70%), Gaps = 3/362 (0%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G N  L  ELWHACAGPLV+LP  G RV YFPQGH EQ+ A+ ++ ++  +P++ NLP +
Sbjct: 13  GCNDALYKELWHACAGPLVTLPCEGERVYYFPQGHMEQLEASMHQGMEQQMPSF-NLPSK 71

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           ++C++ NV   A+ ETDEVYAQ+TL P  P++ + T     L  P +   + FCKTLTAS
Sbjct: 72  ILCKVVNVQRRAEPETDEVYAQITLLP-EPDQSEVTSPDPPLPEPERCTVHSFCKTLTAS 130

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSV RR A+   P LD S QPP QEL+A DLH  EW FRHIFRGQP+RHLLTT
Sbjct: 131 DTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNEWHFRHIFRGQPRRHLLTT 190

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWSVFVS+K+LVAGD+ +F+  E  +L +G+RR +R  T MPSSV+SS SMH+G+LA A+
Sbjct: 191 GWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQTNMPSSVISSQSMHLGVLATAS 250

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 302
           HA AT + F+VF+ PR S SEF++ L KY++A  H ++SVGMRF+M FE EE   RR+ G
Sbjct: 251 HAIATGTLFSVFYKPRTSRSEFIVNLNKYIEAQNH-KLSVGMRFKMRFEGEEVPERRFSG 309

Query: 303 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 362
           TI G+ D     W++S WRS+KV WDE ++  R  RVS W++EPL       S    R K
Sbjct: 310 TIVGVGDNISSGWADSEWRSLKVHWDEPSSILRPERVSPWDLEPLVATTPSNSQPMQRNK 369

Query: 363 RP 364
           RP
Sbjct: 370 RP 371



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 35/90 (38%), Positives = 59/90 (65%), Gaps = 2/90 (2%)

Query: 679 RTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 737
           R+  KV+  G +VGR++D+++F  Y +L  +L +MF IEG+     +  WQ+V+ D E+D
Sbjct: 534 RSCTKVHMQGVAVGRAVDLTQFERYEDLLRKLEEMFDIEGELSGSTKK-WQVVYTDNEDD 592

Query: 738 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           ++ +GDDPW  F S V  I I + E+V+++
Sbjct: 593 MMKVGDDPWHEFCSMVKKIFIYASEEVKRL 622


>gi|356527524|ref|XP_003532359.1| PREDICTED: auxin response factor 2-like [Glycine max]
          Length = 851

 Score =  387 bits (994), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 193/366 (52%), Positives = 259/366 (70%), Gaps = 11/366 (3%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           L  ELWHACAGPLV++P    RV YFPQGH EQV A+TN+  + H+P Y +LPP+++C++
Sbjct: 48  LYRELWHACAGPLVTVPRERERVFYFPQGHIEQVEASTNQVAEQHMPVY-DLPPKILCRV 106

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQP---TNYFCKTLTASDT 124
            NV + A+ +TDEV+AQ+TL P   E  +D     + G P+  P    + FCKTLTASDT
Sbjct: 107 INVMLKAEPDTDEVFAQVTLLP---EPNQDENAVEKEGPPAPPPRFHVHSFCKTLTASDT 163

Query: 125 STHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 184
           STHGGFSV RR A++  P LD S QPP QEL+A+DLH  EW+FRHIFRGQP+RHLL +GW
Sbjct: 164 STHGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGW 223

Query: 185 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHA 244
           SVFVS+KRLVAGD+ +F+  E  +L +G+RRA+R    +PSSV+SS SMH+G+LA A HA
Sbjct: 224 SVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHA 283

Query: 245 AATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTI 304
             T + FTV++ PR SP+EF++P  +Y++++     ++GMRF+M FE EE+  +R+ GTI
Sbjct: 284 ILTGTMFTVYYKPRTSPAEFIVPYDQYMESL-KNNYTIGMRFKMRFEGEEAPEQRFTGTI 342

Query: 305 TGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRP 364
            GI D D  RW  S WRS+KV WDE++   R  RVS W+IEP    P+  +L PL + RP
Sbjct: 343 VGIEDADTKRWPKSKWRSLKVRWDETSNIPRPERVSQWKIEPALA-PL--ALNPLPMPRP 399

Query: 365 WHPSTS 370
             P ++
Sbjct: 400 KRPRSN 405



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 44/111 (39%), Positives = 66/111 (59%), Gaps = 2/111 (1%)

Query: 658 CMQDSSELLHNVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIE 716
            +Q S   L +V         R+  KV+K G ++GRS+D+++FS Y EL  EL Q+F   
Sbjct: 706 VLQTSQPHLKDVQAKSHSGSARSCTKVHKKGIALGRSVDLTKFSDYGELITELDQLFEFG 765

Query: 717 GKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           G+   P +  W +V+ D E D++L+GDDPW+ FV+ V  I I   E++QKM
Sbjct: 766 GELTSPQKD-WLIVYTDNEGDMMLVGDDPWQEFVAMVRKIYIYPKEEIQKM 815


>gi|224136320|ref|XP_002322300.1| predicted protein [Populus trichocarpa]
 gi|222869296|gb|EEF06427.1| predicted protein [Populus trichocarpa]
          Length = 852

 Score =  387 bits (993), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 185/345 (53%), Positives = 247/345 (71%), Gaps = 2/345 (0%)

Query: 1   MIGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLP 60
           ++     L +ELWHACAGPLV++P  G RV YFPQGH EQV A+TN+  D  +P Y NL 
Sbjct: 45  VVDAETALYNELWHACAGPLVTVPREGDRVFYFPQGHIEQVEASTNQVADQQMPLY-NLL 103

Query: 61  PQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLT 120
           P+++C++ NV + A+ +TDEV+AQ+TL P   +++           P +   + FCKTLT
Sbjct: 104 PKILCRVVNVQLKAEPDTDEVFAQVTLLPEHNQDESVLEKEPPPPPPPRFHVHSFCKTLT 163

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
           ASDTSTHGGFSV RR A++  P LD S QPP QEL+A+DLH  EW+FRHIFRGQP+RHLL
Sbjct: 164 ASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLL 223

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 240
            +GWSVFVS+KRLVAGD+ +F+  E  +L +G+RRA+R    +PSSV+SS SMH+G+LA 
Sbjct: 224 QSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLAT 283

Query: 241 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 300
           A HA +T + FTV++ PR SP+EF++P  +Y+++V     S+GMRF+M FE EE+  +R+
Sbjct: 284 AWHAVSTGTLFTVYYKPRTSPAEFIVPFDQYMESV-KNNYSIGMRFKMRFEGEEAPEQRF 342

Query: 301 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 345
            GTI GI D DP RW NS WR +KV WDE++   R  RVS W+IE
Sbjct: 343 TGTIVGIEDADPGRWKNSKWRCLKVRWDETSTMPRPERVSPWKIE 387



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 41/103 (39%), Positives = 69/103 (66%), Gaps = 7/103 (6%)

Query: 678 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           TR+  KV+K G ++GRS+D+++F++Y+EL  EL ++F   G+   P ++ W +V+ D E+
Sbjct: 724 TRSCTKVHKQGIALGRSVDLAKFNNYDELIAELDRLFEFNGELMAPQKN-WLIVYTDDED 782

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPEDVQK-----MGEQGVES 774
           D++L+GDDPW+ FV  V  I I + E+ QK     +  +GVE+
Sbjct: 783 DMMLVGDDPWQEFVGMVRKIVIYTKEEAQKIKPGALNSKGVEN 825


>gi|296088177|emb|CBI35669.3| unnamed protein product [Vitis vinifera]
          Length = 767

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 197/387 (50%), Positives = 268/387 (69%), Gaps = 10/387 (2%)

Query: 2   IGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 61
           +     L  ELWHACAGPLV++P VG RV YFPQGH EQV A+TN+  D  +P Y +L  
Sbjct: 4   VDSEDALYKELWHACAGPLVTVPRVGERVFYFPQGHLEQVEASTNQVADQQMPAY-DLRA 62

Query: 62  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQP-TNYFCKTLT 120
           +++C++ NV + A+ +TDEV+AQ+TL P  P++ +++    ++  P+ +P  + FCKTLT
Sbjct: 63  KILCRVINVHLKAESDTDEVFAQVTLLP-EPKQDENSAEKEDVLTPTPRPRVHSFCKTLT 121

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
           ASDTSTHGGFSV RR A++  P LD S QPP QEL+A+DLH  EW+FRHIFRGQP+RHLL
Sbjct: 122 ASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLL 181

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 240
            +GWS+FVS+K+LVAGD+ +F+  E  +L +G+RRA+R  +  PSSV+SS SMH+G+LA 
Sbjct: 182 QSGWSLFVSSKKLVAGDAFIFLRGENGELRVGVRRAMRQLSNGPSSVISSHSMHLGVLAT 241

Query: 241 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 300
           A HA +T + FTV++ PR SP+EF+IP  +Y++AV     S+GMRF+M FE EE+  +R+
Sbjct: 242 AWHAVSTGTIFTVYYKPRTSPAEFIIPFDQYMEAV-KNHYSIGMRFKMKFEGEEAPEQRF 300

Query: 301 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL- 359
            GT+ G  D DP+RW  S WR +KV WDE+++  R   VS W IE   T    PSL PL 
Sbjct: 301 TGTVIGTEDADPMRWPGSKWRCLKVRWDETSSVPRPECVSPWNIEVALT---PPSLNPLP 357

Query: 360 --RLKRPWHPSTSSFNDNRDETASGLN 384
             R KRP     SS  ++   T  GL+
Sbjct: 358 VSRSKRPRANMMSSSTESSVLTREGLS 384



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 60/91 (65%), Gaps = 2/91 (2%)

Query: 678 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           TR+ +KV+K G +VGRS+D+++F+ Y EL  EL Q+F   G+    L   W +VF D E 
Sbjct: 637 TRSCIKVHKQGIAVGRSVDLTKFNGYTELISELDQIFEFNGELIS-LNKDWLIVFTDDEG 695

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           D++L+GDDPW  F S V  I + + E++Q+M
Sbjct: 696 DMMLVGDDPWPEFCSMVRKIFVYTREEIQRM 726


>gi|218194918|gb|EEC77345.1| hypothetical protein OsI_16025 [Oryza sativa Indica Group]
          Length = 660

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 197/375 (52%), Positives = 260/375 (69%), Gaps = 9/375 (2%)

Query: 3   GDNKC---LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNL 59
           G   C   L  ELWHACAGPLV++P  G RV YFPQGH EQ+ A+TN+++D ++P + NL
Sbjct: 9   GSGTCSDALFRELWHACAGPLVTVPKRGERVYYFPQGHMEQLEASTNQQLDQYLPMF-NL 67

Query: 60  PPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTL 119
           P +++C + NV + A+ ++DEVYAQ+ LQP + + +  +  P EL    K   + FCKTL
Sbjct: 68  PSKILCSVVNVELRAEADSDEVYAQIMLQPEADQSELTSLDP-ELQDLEKCTAHSFCKTL 126

Query: 120 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 179
           TASDTSTHGGFSV RR AE+  P LD S  PP QEL+A+DLH  EW FRHIFRGQP+RHL
Sbjct: 127 TASDTSTHGGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRHIFRGQPRRHL 186

Query: 180 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLA 239
           LTTGWSVFVS+KRLVAGD+ +F+  E  +L +G+RR +R    MPSSV+SS SMH+G+LA
Sbjct: 187 LTTGWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRLMRQVNNMPSSVISSHSMHLGVLA 246

Query: 240 AAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRR 299
            A+HA +T + F+VF+ PR S SEFV+ + KY++A     +SVGMRF+M FE +E+  RR
Sbjct: 247 TASHAISTGTLFSVFYKPRTSRSEFVVSVNKYLEAK-KQNLSVGMRFKMRFEGDEAPERR 305

Query: 300 YMGTITGISDLDPVR---WSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSL 356
           + GTI GI  +  +    W++S W+S+KV WDE +A     RVS WE+EPL      P  
Sbjct: 306 FSGTIIGIGSVPAMSKSPWADSDWKSLKVQWDEPSAIVCPDRVSPWELEPLDASNPQPPQ 365

Query: 357 FPLRLKRPWHPSTSS 371
            PLR KR   P++ S
Sbjct: 366 PPLRNKRARPPASPS 380



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 35/87 (40%), Positives = 57/87 (65%), Gaps = 2/87 (2%)

Query: 683 KVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLL 741
           KV   G +VGR++D+++ + Y +LR +L +MF I+G     L+  WQ+V+ D E+D++L+
Sbjct: 538 KVIMQGMAVGRAVDLTKLNGYGDLRSKLEEMFDIQGDLCPTLKR-WQVVYTDDEDDMMLV 596

Query: 742 GDDPWEAFVSNVWYIKILSPEDVQKMG 768
           GDDPW+ F S V  I I S E+ + + 
Sbjct: 597 GDDPWDEFCSMVKRIYIYSYEEAKLLA 623


>gi|307136001|gb|ADN33857.1| auxin response factor-like protein [Cucumis melo subsp. melo]
          Length = 840

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 189/373 (50%), Positives = 261/373 (69%), Gaps = 5/373 (1%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
            L +ELW+ACAGPLVS+P    RV YFPQGH EQV A+T++  D  +P Y NLP +++C+
Sbjct: 40  ALYTELWNACAGPLVSVPRENERVFYFPQGHIEQVEASTSQVADQQMPVY-NLPSKILCR 98

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 126
           + NV + A+ ETDEV+AQ+TL P + +++           P +   + FCKTLTASDTST
Sbjct: 99  VINVHLKAEPETDEVFAQITLLPEANQDEHAVDKEPPPPPPRRFHVHSFCKTLTASDTST 158

Query: 127 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 186
           HGGFSV RR A++  P LD S QPP QEL+A+DLH  EW+FRHIFRGQP+RHLL +GWSV
Sbjct: 159 HGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 218

Query: 187 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 246
           FVS+KRLVAGD+ +F+  E  +L +G+RRA+R    +PSSV+SS SMH+G+LA A HA +
Sbjct: 219 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQHGNVPSSVISSHSMHLGVLATAWHAIS 278

Query: 247 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 306
           T + FTV++ PR SPSEF++P  +Y++++  +  ++GMRF+M FE EE+  +R+ GTI G
Sbjct: 279 TGTMFTVYYKPRTSPSEFIVPYDQYMESIKKS-YTIGMRFKMRFEGEEAPEQRFTGTIIG 337

Query: 307 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWH 366
             D DP RW +S WR +KV WDE++   R  +VS W+IEP       P+L PL + RP  
Sbjct: 338 CEDADPKRWKDSKWRCLKVRWDETSTISRPEKVSPWKIEPALA---PPALNPLPMTRPKR 394

Query: 367 PSTSSFNDNRDET 379
           P ++  + + D +
Sbjct: 395 PRSNMVSTSPDSS 407



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 62/95 (65%), Gaps = 2/95 (2%)

Query: 674 QLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFV 732
           Q T  R+  KV+K G ++GRS+D+SRF++Y+EL  EL Q+F   G+   P +  W +V+ 
Sbjct: 710 QGTSARSCTKVHKQGIALGRSVDLSRFNNYDELVAELDQLFEFGGELLAP-KKNWLIVYT 768

Query: 733 DRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           D E D++L+GDDPW  F   V  I I + E+VQKM
Sbjct: 769 DDEGDMMLVGDDPWREFCGMVRKIFIYTREEVQKM 803


>gi|122207373|sp|Q2R3F5.2|ARFW_ORYSJ RecName: Full=Auxin response factor 23; AltName: Full=OsARF1
 gi|108864435|gb|ABA93992.2| Auxin response factor 2, putative, expressed [Oryza sativa Japonica
           Group]
 gi|222616062|gb|EEE52194.1| hypothetical protein OsJ_34072 [Oryza sativa Japonica Group]
          Length = 853

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 193/363 (53%), Positives = 256/363 (70%), Gaps = 11/363 (3%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           L +ELW ACAGPLV++P VG +V YFPQGH EQV A+TN+  +  +  Y NLP +++C++
Sbjct: 38  LFTELWSACAGPLVTVPRVGEKVFYFPQGHIEQVEASTNQVGEQRMQLY-NLPWKILCEV 96

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNY-------FCKTLT 120
            NV + A+ +TDEVYAQ+TL P S +++ +     E  +PS     +       FCKTLT
Sbjct: 97  MNVELKAEPDTDEVYAQLTLLPESKQQEDNGST--EEEVPSAPAAGHVRPRVHSFCKTLT 154

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
           ASDTSTHGGFSV RR A++  P LD S QPP QEL+A+DLH VEW+FRHIFRGQP+RHLL
Sbjct: 155 ASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLL 214

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 240
            +GWSVFVSAKRLVAGD+ +F+  E  +L +G+RRA+R  T +PSSV+SS SMH+G+LA 
Sbjct: 215 QSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISSHSMHLGVLAT 274

Query: 241 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 300
           A HA  T + FTV++ PR SP+EFV+P  +Y++++     S+GMRF+M FE EE+  +R+
Sbjct: 275 AWHAVNTGTMFTVYYKPRTSPAEFVVPYDRYMESL-KQNYSIGMRFKMRFEGEEAPEQRF 333

Query: 301 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLR 360
            GTI G+ D DP  W  S WRS+KV WDE+++  R  RVS W+IEP  + P    L   R
Sbjct: 334 TGTIVGMGDSDPAGWPESKWRSLKVRWDEASSIPRPERVSPWQIEPAVSPPPVNPLPVPR 393

Query: 361 LKR 363
            KR
Sbjct: 394 TKR 396



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 51/137 (37%), Positives = 77/137 (56%), Gaps = 2/137 (1%)

Query: 662 SSELLHNVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFE 720
           S +   N+    Q   TR+  KV+K G ++GRS+D+++F+ Y EL  EL  MF   G+ +
Sbjct: 708 SQQASRNMSCKSQGVSTRSCKKVHKQGIALGRSVDLTKFNGYEELIAELDDMFDFNGELK 767

Query: 721 DPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSG 780
            P +  W +V+ D E D++L+GDDPW  F   V  I I + E+VQ+M    + S S  S 
Sbjct: 768 GPKKE-WMVVYTDNEGDMMLVGDDPWIEFCDMVHKIFIYTREEVQRMNPGTLNSRSEDSH 826

Query: 781 QRANSRGNCGRDPVGSL 797
             +  RG+ GR+  G L
Sbjct: 827 ANSMERGSVGREMRGCL 843


>gi|115485689|ref|NP_001067988.1| Os11g0523800 [Oryza sativa Japonica Group]
 gi|108864434|gb|ABG22498.1| Auxin response factor 2, putative, expressed [Oryza sativa Japonica
           Group]
 gi|108864436|gb|ABG22499.1| Auxin response factor 2, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113645210|dbj|BAF28351.1| Os11g0523800 [Oryza sativa Japonica Group]
          Length = 852

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 193/363 (53%), Positives = 256/363 (70%), Gaps = 11/363 (3%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           L +ELW ACAGPLV++P VG +V YFPQGH EQV A+TN+  +  +  Y NLP +++C++
Sbjct: 37  LFTELWSACAGPLVTVPRVGEKVFYFPQGHIEQVEASTNQVGEQRMQLY-NLPWKILCEV 95

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNY-------FCKTLT 120
            NV + A+ +TDEVYAQ+TL P S +++ +     E  +PS     +       FCKTLT
Sbjct: 96  MNVELKAEPDTDEVYAQLTLLPESKQQEDNGST--EEEVPSAPAAGHVRPRVHSFCKTLT 153

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
           ASDTSTHGGFSV RR A++  P LD S QPP QEL+A+DLH VEW+FRHIFRGQP+RHLL
Sbjct: 154 ASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLL 213

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 240
            +GWSVFVSAKRLVAGD+ +F+  E  +L +G+RRA+R  T +PSSV+SS SMH+G+LA 
Sbjct: 214 QSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISSHSMHLGVLAT 273

Query: 241 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 300
           A HA  T + FTV++ PR SP+EFV+P  +Y++++     S+GMRF+M FE EE+  +R+
Sbjct: 274 AWHAVNTGTMFTVYYKPRTSPAEFVVPYDRYMESL-KQNYSIGMRFKMRFEGEEAPEQRF 332

Query: 301 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLR 360
            GTI G+ D DP  W  S WRS+KV WDE+++  R  RVS W+IEP  + P    L   R
Sbjct: 333 TGTIVGMGDSDPAGWPESKWRSLKVRWDEASSIPRPERVSPWQIEPAVSPPPVNPLPVPR 392

Query: 361 LKR 363
            KR
Sbjct: 393 TKR 395



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 51/137 (37%), Positives = 77/137 (56%), Gaps = 2/137 (1%)

Query: 662 SSELLHNVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFE 720
           S +   N+    Q   TR+  KV+K G ++GRS+D+++F+ Y EL  EL  MF   G+ +
Sbjct: 707 SQQASRNMSCKSQGVSTRSCKKVHKQGIALGRSVDLTKFNGYEELIAELDDMFDFNGELK 766

Query: 721 DPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSG 780
            P +  W +V+ D E D++L+GDDPW  F   V  I I + E+VQ+M    + S S  S 
Sbjct: 767 GPKKE-WMVVYTDNEGDMMLVGDDPWIEFCDMVHKIFIYTREEVQRMNPGTLNSRSEDSH 825

Query: 781 QRANSRGNCGRDPVGSL 797
             +  RG+ GR+  G L
Sbjct: 826 ANSMERGSVGREMRGCL 842


>gi|23893346|emb|CAC83756.1| auxin response factor 1 [Oryza sativa Japonica Group]
          Length = 836

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 194/364 (53%), Positives = 256/364 (70%), Gaps = 11/364 (3%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
            L +ELW ACAGPLV++P VG +V YFPQGH EQV A+TN+  +  +  Y NLP +++C+
Sbjct: 20  ALFTELWSACAGPLVTVPRVGEKVFYFPQGHIEQVEASTNQVGEQRMQLY-NLPWKILCE 78

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNY-------FCKTL 119
           + NV + A+ +TDEVYAQ+TL P S  +Q++     E  +PS     +       FCKTL
Sbjct: 79  VMNVELKAEPDTDEVYAQLTLLPES--KQQEDNGSTEEEVPSAPAAGHVRPRVHSFCKTL 136

Query: 120 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 179
           TASDTSTHGGFSV RR A++  P LD S QPP QEL+A+DLH VEW+FRHIFRGQP+RHL
Sbjct: 137 TASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHL 196

Query: 180 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLA 239
           L +GWSVFVSAKRLVAGD+ +F+  E  +L +G+RRA+R  T +PSSV+SS SMH+G+LA
Sbjct: 197 LQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISSHSMHLGVLA 256

Query: 240 AAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRR 299
            A HA  T + FTV++ PR SP+EFV+P  +Y++++     S+GMRF+M FE EE+  +R
Sbjct: 257 TAWHAVNTGTMFTVYYKPRTSPAEFVVPYDRYMESL-KQNYSIGMRFKMRFEGEEAPEQR 315

Query: 300 YMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL 359
           + GTI G+ D DP  W  S WRS+KV WDE+++  R  RVS W+IEP  + P    L   
Sbjct: 316 FTGTIVGMGDSDPAGWPESKWRSLKVRWDEASSIPRPERVSPWQIEPAVSPPPVNPLPVP 375

Query: 360 RLKR 363
           R KR
Sbjct: 376 RTKR 379



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 51/137 (37%), Positives = 77/137 (56%), Gaps = 2/137 (1%)

Query: 662 SSELLHNVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFE 720
           S +   N+    Q   TR+  KV+K G ++GRS+D+++F+ Y EL  EL  MF   G+ +
Sbjct: 691 SQQASRNMSCKSQGVSTRSCKKVHKQGIALGRSVDLTKFNGYEELIAELDDMFDFNGELK 750

Query: 721 DPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSG 780
            P +  W +V+ D E D++L+GDDPW  F   V  I I + E+VQ+M    + S S  S 
Sbjct: 751 GPKKE-WMVVYTDNEGDMMLVGDDPWIEFCDMVHKIFIYTREEVQRMNPGTLNSRSEDSH 809

Query: 781 QRANSRGNCGRDPVGSL 797
             +  RG+ GR+  G L
Sbjct: 810 ANSMERGSVGREMRGCL 826


>gi|295844294|gb|ADG43144.1| auxin response factor 10 [Zea mays]
          Length = 799

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 194/362 (53%), Positives = 254/362 (70%), Gaps = 12/362 (3%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           L  ELW ACAGPLV++P VG  V YFPQGH EQV A+ N+   + +  Y +LPP+L+C++
Sbjct: 15  LYPELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAGNQMRLY-DLPPKLLCRV 73

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIEL--GIPSKQP---TNYFCKTLTAS 122
            NV + A+ +TDEVYAQ+ L P    E + T VP E     P+  P      FCKTLTAS
Sbjct: 74  LNVELKAETDTDEVYAQIMLMP----EPEQTDVPAEKPSSAPAASPRPAVRSFCKTLTAS 129

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSV RR A++  P LD +  PP QEL+A+DLH +EW+FRHIFRGQP+RHLL +
Sbjct: 130 DTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMEWRFRHIFRGQPRRHLLQS 189

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWSVFVS+KRLVAGD+ +F+  E  +L +G+RRA+R  + +PSSV+SS SMH+G+LA A 
Sbjct: 190 GWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVLATAW 249

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 302
           HA  T S FTV++ PR SPSEF+IP  +Y+++V     S+GMRFRM FE EE+  +R+ G
Sbjct: 250 HAINTKSMFTVYYKPRTSPSEFIIPYDQYMESV-KNNYSIGMRFRMRFEGEEAPEQRFTG 308

Query: 303 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 362
           TI G  +LDP+ W +S WR +KV WDE +   R  RVS W+IEP ++ P+ P +   R K
Sbjct: 309 TIVGCENLDPL-WPDSSWRYLKVRWDEPSTIPRPDRVSPWKIEPASSPPVNPLVHSSRAK 367

Query: 363 RP 364
           RP
Sbjct: 368 RP 369



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 51/136 (37%), Positives = 78/136 (57%), Gaps = 8/136 (5%)

Query: 641 VSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRF 699
           +  +P G      +    +Q + +   ++    Q   TR+  KV+K G ++GRS+D+S+F
Sbjct: 646 IECLPEGSVSTAGTATENIQQAPQSSKDIQSKSQGASTRSCTKVHKQGVALGRSVDLSKF 705

Query: 700 SSYNELREELGQMFGIEGKFEDPLRSG---WQLVFVDRENDVLLLGDDPWEAFVSNVWYI 756
           + Y EL+ EL +MF  EG+    L SG   WQ+V+ D E D++L+GDDPWE F S V  I
Sbjct: 706 TDYGELQAELDKMFDFEGE----LVSGSQNWQIVYTDDEGDMMLVGDDPWEEFCSIVRKI 761

Query: 757 KILSPEDVQKMGEQGV 772
            I + E+VQKM  +  
Sbjct: 762 YIYTKEEVQKMNSKSA 777


>gi|414878885|tpg|DAA56016.1| TPA: hypothetical protein ZEAMMB73_705793 [Zea mays]
          Length = 805

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 194/362 (53%), Positives = 254/362 (70%), Gaps = 12/362 (3%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           L  ELW ACAGPLV++P VG  V YFPQGH EQV A+ N+   + +  Y +LPP+L+C++
Sbjct: 21  LYPELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAGNQMRLY-DLPPKLLCRV 79

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIEL--GIPSKQP---TNYFCKTLTAS 122
            NV + A+ +TDEVYAQ+ L P    E + T VP E     P+  P      FCKTLTAS
Sbjct: 80  LNVELKAETDTDEVYAQIMLMP----EPEQTDVPAEKPSSAPAASPRPAVRSFCKTLTAS 135

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSV RR A++  P LD +  PP QEL+A+DLH +EW+FRHIFRGQP+RHLL +
Sbjct: 136 DTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMEWRFRHIFRGQPRRHLLQS 195

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWSVFVS+KRLVAGD+ +F+  E  +L +G+RRA+R  + +PSSV+SS SMH+G+LA A 
Sbjct: 196 GWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVLATAW 255

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 302
           HA  T S FTV++ PR SPSEF+IP  +Y+++V     S+GMRFRM FE EE+  +R+ G
Sbjct: 256 HAINTKSMFTVYYKPRTSPSEFIIPYDQYMESV-KNNYSIGMRFRMRFEGEEAPEQRFTG 314

Query: 303 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 362
           TI G  +LDP+ W +S WR +KV WDE +   R  RVS W+IEP ++ P+ P +   R K
Sbjct: 315 TIVGCENLDPL-WPDSSWRYLKVRWDEPSTIPRPDRVSPWKIEPASSPPVNPLVHSSRAK 373

Query: 363 RP 364
           RP
Sbjct: 374 RP 375



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 51/136 (37%), Positives = 78/136 (57%), Gaps = 8/136 (5%)

Query: 641 VSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRF 699
           +  +P G      +    +Q + +   ++    Q   TR+  KV+K G ++GRS+D+S+F
Sbjct: 652 IECLPEGSVSTAGTATENIQQAPQSSKDIQSKSQGASTRSCTKVHKQGVALGRSVDLSKF 711

Query: 700 SSYNELREELGQMFGIEGKFEDPLRSG---WQLVFVDRENDVLLLGDDPWEAFVSNVWYI 756
           + Y EL+ EL +MF  EG+    L SG   WQ+V+ D E D++L+GDDPWE F S V  I
Sbjct: 712 TDYGELQAELDKMFDFEGE----LVSGSQNWQIVYTDDEGDMMLVGDDPWEEFCSIVRKI 767

Query: 757 KILSPEDVQKMGEQGV 772
            I + E+VQKM  +  
Sbjct: 768 YIYTKEEVQKMNSKSA 783


>gi|297734755|emb|CBI16989.3| unnamed protein product [Vitis vinifera]
          Length = 643

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 195/367 (53%), Positives = 256/367 (69%), Gaps = 3/367 (0%)

Query: 5   NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLI 64
           N  L  ELWHACAGPLV++P    RV YFPQGH EQ+ A+ ++ +D  +P++ NLP +++
Sbjct: 17  NDALYKELWHACAGPLVNVPREQERVYYFPQGHMEQLEASMHQGLDQKMPSF-NLPSKIL 75

Query: 65  CQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDT 124
           C++ NV + A+ ETDEVYAQ+TL P  P++ + T     L  P     + FCKTLTASDT
Sbjct: 76  CKVVNVHLRAEPETDEVYAQVTLLP-EPDQSEITSPDPPLPEPQSCTVHSFCKTLTASDT 134

Query: 125 STHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 184
           STHGGFSV RR A++  P LD S  PP QEL+A+DLH  EW FRHIFRGQP+RHLLTTGW
Sbjct: 135 STHGGFSVLRRHADECLPPLDMSQNPPWQELVAKDLHGNEWHFRHIFRGQPRRHLLTTGW 194

Query: 185 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHA 244
           SVFVS+KRL AGD+ +F+  E  +L +G+RR +R    +P SV+SS SMH+G+LA A+HA
Sbjct: 195 SVFVSSKRLAAGDAFIFLRGENGELRVGVRRLMRQLNNVPPSVISSHSMHLGVLATASHA 254

Query: 245 AATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTI 304
             T + F+VF+ PRASPSEF++ + KY++A  H +VSVGMRF+M FE +E+  RR+ GTI
Sbjct: 255 ITTGTLFSVFYKPRASPSEFIVSVNKYLEARNH-KVSVGMRFKMRFEGDEAPERRFSGTI 313

Query: 305 TGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRP 364
            G+ D     W++S WRS+KV WDE ++  R  RVS WE+EPL T     +    R KRP
Sbjct: 314 VGVGDTGSSGWTDSEWRSLKVQWDEPSSILRPERVSPWELEPLVTETPLTAQPMQRSKRP 373

Query: 365 WHPSTSS 371
             P  SS
Sbjct: 374 RSPVLSS 380



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 38/90 (42%), Positives = 63/90 (70%), Gaps = 2/90 (2%)

Query: 679 RTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 737
           R+  KV+  G +VGR++D+++FSSY EL  +L +MF I+G+   P +  WQ+V+ D E+D
Sbjct: 519 RSCTKVHMQGMAVGRAVDLTQFSSYKELLSKLEEMFDIKGELCGPTKK-WQVVYTDDEDD 577

Query: 738 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           ++++GDDPW  F S V  I I + E+V+++
Sbjct: 578 MMMVGDDPWHEFCSMVRKIFIYTVEEVKEL 607


>gi|225459961|ref|XP_002266947.1| PREDICTED: auxin response factor 1-like isoform 1 [Vitis vinifera]
          Length = 645

 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 195/367 (53%), Positives = 256/367 (69%), Gaps = 3/367 (0%)

Query: 5   NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLI 64
           N  L  ELWHACAGPLV++P    RV YFPQGH EQ+ A+ ++ +D  +P++ NLP +++
Sbjct: 19  NDALYKELWHACAGPLVNVPREQERVYYFPQGHMEQLEASMHQGLDQKMPSF-NLPSKIL 77

Query: 65  CQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDT 124
           C++ NV + A+ ETDEVYAQ+TL P  P++ + T     L  P     + FCKTLTASDT
Sbjct: 78  CKVVNVHLRAEPETDEVYAQVTLLP-EPDQSEITSPDPPLPEPQSCTVHSFCKTLTASDT 136

Query: 125 STHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 184
           STHGGFSV RR A++  P LD S  PP QEL+A+DLH  EW FRHIFRGQP+RHLLTTGW
Sbjct: 137 STHGGFSVLRRHADECLPPLDMSQNPPWQELVAKDLHGNEWHFRHIFRGQPRRHLLTTGW 196

Query: 185 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHA 244
           SVFVS+KRL AGD+ +F+  E  +L +G+RR +R    +P SV+SS SMH+G+LA A+HA
Sbjct: 197 SVFVSSKRLAAGDAFIFLRGENGELRVGVRRLMRQLNNVPPSVISSHSMHLGVLATASHA 256

Query: 245 AATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTI 304
             T + F+VF+ PRASPSEF++ + KY++A  H +VSVGMRF+M FE +E+  RR+ GTI
Sbjct: 257 ITTGTLFSVFYKPRASPSEFIVSVNKYLEARNH-KVSVGMRFKMRFEGDEAPERRFSGTI 315

Query: 305 TGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRP 364
            G+ D     W++S WRS+KV WDE ++  R  RVS WE+EPL T     +    R KRP
Sbjct: 316 VGVGDTGSSGWTDSEWRSLKVQWDEPSSILRPERVSPWELEPLVTETPLTAQPMQRSKRP 375

Query: 365 WHPSTSS 371
             P  SS
Sbjct: 376 RSPVLSS 382



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 38/90 (42%), Positives = 63/90 (70%), Gaps = 2/90 (2%)

Query: 679 RTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 737
           R+  KV+  G +VGR++D+++FSSY EL  +L +MF I+G+   P +  WQ+V+ D E+D
Sbjct: 521 RSCTKVHMQGMAVGRAVDLTQFSSYKELLSKLEEMFDIKGELCGPTKK-WQVVYTDDEDD 579

Query: 738 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           ++++GDDPW  F S V  I I + E+V+++
Sbjct: 580 MMMVGDDPWHEFCSMVRKIFIYTVEEVKEL 609


>gi|291196879|emb|CAX63130.1| ARF-L1 protein [Ephedra distachya]
          Length = 905

 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 194/340 (57%), Positives = 245/340 (72%), Gaps = 6/340 (1%)

Query: 11  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYP-NLPPQLICQLHN 69
           ELWHACAGPL+SLP  G  VVYFPQGH EQ+++T  ++     P  P +LPPQ+ C++ N
Sbjct: 40  ELWHACAGPLISLPKKGALVVYFPQGHIEQLSSTFKQQPPLPPPMSPYDLPPQIFCRVLN 99

Query: 70  VTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIE---LGIPSKQPTNYFCKTLTASDTST 126
           V + AD ETDEV+AQ+TL P  PE   D F   E     + SK   + FCKTLTASDTST
Sbjct: 100 VNLLADQETDEVFAQVTLVP-EPEPVGDNFQDEENQNASVLSKPTLHMFCKTLTASDTST 158

Query: 127 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 186
           HGGFSVPRRAAE  FP LD++ Q P+QEL+A+DLH VEWKFRHI+RGQP+RHLLTTGWSV
Sbjct: 159 HGGFSVPRRAAEDCFPPLDYTQQRPSQELLAKDLHGVEWKFRHIYRGQPRRHLLTTGWSV 218

Query: 187 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 246
           FVS K L    +VLF+  E  +L LGIRR  R  + +PSSV S  ++++ ++AAA +A A
Sbjct: 219 FVSPKVLSLXYAVLFLRGENGELRLGIRRNNRKLSSVPSSVFSDQNVYLSVIAAATNAVA 278

Query: 247 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 306
           T S F +F+NPRASP+EF+IP  KYV++   + + VG RFRM FE+E+++ +RY G +T 
Sbjct: 279 TKSMFHIFYNPRASPAEFIIPYQKYVRSCKQSLL-VGTRFRMKFESEDTAEKRYTGIVTS 337

Query: 307 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEP 346
           I D DPV+W  S WRS+KV WDE +  ERQ RVS WEIEP
Sbjct: 338 IGDADPVKWPGSKWRSLKVDWDEHSLNERQERVSPWEIEP 377



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 66/95 (69%), Gaps = 2/95 (2%)

Query: 674 QLTPTRTFVKVYKSGSV-GRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFV 732
           Q T  R   KV+K GSV GR++D+S+F  Y++L  EL ++F +EG   +P + GWQ+V+ 
Sbjct: 799 QPTIVRKCTKVHKQGSVVGRAIDLSKFDGYDQLINELERLFDMEGLLNNPEK-GWQVVYT 857

Query: 733 DRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           D E+DV+L+GDDPW+ F + V  I I + ++VQK+
Sbjct: 858 DNEDDVMLVGDDPWQEFCNIVCKILIYTHDEVQKL 892


>gi|414878884|tpg|DAA56015.1| TPA: hypothetical protein ZEAMMB73_705793 [Zea mays]
          Length = 822

 Score =  384 bits (986), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 194/362 (53%), Positives = 254/362 (70%), Gaps = 12/362 (3%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           L  ELW ACAGPLV++P VG  V YFPQGH EQV A+ N+   + +  Y +LPP+L+C++
Sbjct: 21  LYPELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAGNQMRLY-DLPPKLLCRV 79

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIEL--GIPSKQP---TNYFCKTLTAS 122
            NV + A+ +TDEVYAQ+ L P    E + T VP E     P+  P      FCKTLTAS
Sbjct: 80  LNVELKAETDTDEVYAQIMLMP----EPEQTDVPAEKPSSAPAASPRPAVRSFCKTLTAS 135

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSV RR A++  P LD +  PP QEL+A+DLH +EW+FRHIFRGQP+RHLL +
Sbjct: 136 DTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMEWRFRHIFRGQPRRHLLQS 195

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWSVFVS+KRLVAGD+ +F+  E  +L +G+RRA+R  + +PSSV+SS SMH+G+LA A 
Sbjct: 196 GWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVLATAW 255

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 302
           HA  T S FTV++ PR SPSEF+IP  +Y+++V     S+GMRFRM FE EE+  +R+ G
Sbjct: 256 HAINTKSMFTVYYKPRTSPSEFIIPYDQYMESV-KNNYSIGMRFRMRFEGEEAPEQRFTG 314

Query: 303 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 362
           TI G  +LDP+ W +S WR +KV WDE +   R  RVS W+IEP ++ P+ P +   R K
Sbjct: 315 TIVGCENLDPL-WPDSSWRYLKVRWDEPSTIPRPDRVSPWKIEPASSPPVNPLVHSSRAK 373

Query: 363 RP 364
           RP
Sbjct: 374 RP 375



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 65/113 (57%), Gaps = 8/113 (7%)

Query: 641 VSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRF 699
           +  +P G      +    +Q + +   ++    Q   TR+  KV+K G ++GRS+D+S+F
Sbjct: 652 IECLPEGSVSTAGTATENIQQAPQSSKDIQSKSQGASTRSCTKVHKQGVALGRSVDLSKF 711

Query: 700 SSYNELREELGQMFGIEGKFEDPLRSG---WQLVFVDRENDVLLLGDDPWEAF 749
           + Y EL+ EL +MF  EG+    L SG   WQ+V+ D E D++L+GDDPWE  
Sbjct: 712 TDYGELQAELDKMFDFEGE----LVSGSQNWQIVYTDDEGDMMLVGDDPWEVL 760


>gi|357445193|ref|XP_003592874.1| Auxin response factor [Medicago truncatula]
 gi|355481922|gb|AES63125.1| Auxin response factor [Medicago truncatula]
          Length = 671

 Score =  384 bits (986), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 196/369 (53%), Positives = 260/369 (70%), Gaps = 8/369 (2%)

Query: 5   NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLI 64
           N  L  ELWHACAGPLV+LP  G RV YFPQGH EQ+ A+ N+ ++  +P++ NLP +++
Sbjct: 17  NDALYKELWHACAGPLVTLPREGERVYYFPQGHMEQLEASMNQGLEQQMPSF-NLPSKIL 75

Query: 65  CQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIE-LGIPSKQPTNYFCKTLTASD 123
           C++ N+ + A+ ETDEVYAQ+TL P +  +Q +   P + L  P +   + FCKTLTASD
Sbjct: 76  CKVVNIHLRAEPETDEVYAQITLLPET--DQSEVTSPDDPLPEPPRCTVHSFCKTLTASD 133

Query: 124 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 183
           TSTHGGFSV RR A+   P LD + QPP QEL+A DLH  EW FRHIFRGQP+RHLLTTG
Sbjct: 134 TSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRHIFRGQPRRHLLTTG 193

Query: 184 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAH 243
           WSVFVS+K+LVAGD+ +F+  E  +L +G+RR +R  + MPSSV+SS SMH+G+LA A+H
Sbjct: 194 WSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQSNMPSSVISSHSMHLGVLATASH 253

Query: 244 AAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGT 303
           A +T + F+VF+ PR S SEF++ + KY++A  H ++SVGMRF+M FE +E   RR+ GT
Sbjct: 254 AISTGTLFSVFYKPRTSRSEFIVSINKYLEARNH-KLSVGMRFKMRFEGDEVPERRFSGT 312

Query: 304 ITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKR 363
           I G+ D     W++S WRS+KV WDE ++  R  RVS WE+EPL + P   S    R KR
Sbjct: 313 IVGVEDNKSSVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPLVSTPPANSQPTQRNKR 372

Query: 364 ---PWHPST 369
              P  PST
Sbjct: 373 SRPPILPST 381



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/111 (36%), Positives = 66/111 (59%), Gaps = 10/111 (9%)

Query: 679 RTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 737
           R+  KV+  G +VGR++D++RF  Y +L  +L +MF IEG+     +  W +V+ D E+D
Sbjct: 547 RSCTKVHMQGMAVGRAVDLTRFDGYEDLLRKLEEMFDIEGELCGATKK-WLVVYTDNEDD 605

Query: 738 VLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANSRGN 788
           ++++GDDPW  F S V  + I +PE+V+K+        SP  G  +N  G 
Sbjct: 606 MMMVGDDPWLEFCSVVRKMFIYTPEEVKKL--------SPKIGLPSNEEGK 648


>gi|449440496|ref|XP_004138020.1| PREDICTED: auxin response factor 2-like [Cucumis sativus]
          Length = 839

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 188/373 (50%), Positives = 261/373 (69%), Gaps = 5/373 (1%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
            L +ELW+ACAGPLVS+P    RV YFPQGH EQV A+T++  D  +P Y NLP +++C+
Sbjct: 40  ALYTELWNACAGPLVSVPRENERVFYFPQGHIEQVEASTSQVADQQMPVY-NLPSKILCR 98

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 126
           + NV + A+ +TDEV+AQ+TL P + +++           P +   + FCKTLTASDTST
Sbjct: 99  VINVHLKAEPDTDEVFAQITLLPEANQDEHAVDKEPPPPPPRRFHVHSFCKTLTASDTST 158

Query: 127 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 186
           HGGFSV RR A++  P LD S QPP QEL+A+DLH  EW+FRHIFRGQP+RHLL +GWSV
Sbjct: 159 HGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 218

Query: 187 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 246
           FVS+KRLVAGD+ +F+  E  +L +G+RRA+R    +PSSV+SS SMH+G+LA A HA +
Sbjct: 219 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQHGNVPSSVISSHSMHLGVLATAWHAIS 278

Query: 247 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 306
           T + FTV++ PR SPSEF++P  +Y++++  +  ++GMRF+M FE EE+  +R+ GTI G
Sbjct: 279 TGTLFTVYYKPRTSPSEFIVPYDQYMESIKKS-YTIGMRFKMRFEGEEAPEQRFTGTIIG 337

Query: 307 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWH 366
             D DP RW +S WR +KV WDE++   R  +VS W+IEP       P+L PL + RP  
Sbjct: 338 CEDADPKRWKDSKWRCLKVRWDETSTISRPEKVSPWKIEPALA---PPALNPLPMTRPKR 394

Query: 367 PSTSSFNDNRDET 379
           P ++  + + D +
Sbjct: 395 PRSNMVSTSPDSS 407



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 63/95 (66%), Gaps = 2/95 (2%)

Query: 674 QLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFV 732
           Q T  R+  KV+K G ++GRS+D+SRF++Y+EL  EL Q+F   G+ + P +  W +V+ 
Sbjct: 709 QGTSARSCTKVHKQGIALGRSVDLSRFNNYDELVAELDQLFEFGGELQAP-KKNWLIVYT 767

Query: 733 DRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           D E D++L+GDDPW  F   V  I I + E+VQKM
Sbjct: 768 DDEGDMMLVGDDPWREFCGMVRKIFIYTREEVQKM 802


>gi|356560035|ref|XP_003548301.1| PREDICTED: auxin response factor 1-like [Glycine max]
          Length = 665

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 197/369 (53%), Positives = 261/369 (70%), Gaps = 8/369 (2%)

Query: 5   NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLI 64
           N  L  ELWHACAGPLV+LP  G RV YFPQGH EQ+ A+ N+ ++  +P++ NLP +++
Sbjct: 10  NDALYKELWHACAGPLVTLPREGERVYYFPQGHMEQLEASMNQGLEQQMPSF-NLPSKIL 68

Query: 65  CQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNY-FCKTLTASD 123
           C++ NV + A+ ETDEVYAQ+TL P +  +Q +   P +    S + T + FCKTLTASD
Sbjct: 69  CKVVNVHLRAEPETDEVYAQITLLPEA--DQSEVTSPDDPLPESPRCTVHSFCKTLTASD 126

Query: 124 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 183
           TSTHGGFSV RR A+   P LD + QPP QEL+A DLH  EW FRHIFRGQP+RHLLTTG
Sbjct: 127 TSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRHIFRGQPRRHLLTTG 186

Query: 184 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAH 243
           WSVFVS+K+LVAGD+ +F+  E  +L +G+RR +R  + MPSSV+SS SMH+G+LA A+H
Sbjct: 187 WSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQHSNMPSSVISSHSMHLGVLATASH 246

Query: 244 AAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGT 303
           A AT + F+VF+ PR S SEF++ + KY++A  H ++SVGMRF+M FE +E   RR+ GT
Sbjct: 247 AIATGTLFSVFYKPRTSRSEFIVSVNKYLEAQSH-KLSVGMRFKMRFEGDEVPERRFSGT 305

Query: 304 ITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP---MYPSLFPLR 360
           I G+ D   + W++S WRS+KV WDE ++  R  RVS WE+EPL + P     PS    R
Sbjct: 306 IVGVEDNKSLVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPLVSNPPTNSQPSQRNKR 365

Query: 361 LKRPWHPST 369
            + P  PST
Sbjct: 366 SRPPILPST 374



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 59/90 (65%), Gaps = 2/90 (2%)

Query: 679 RTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 737
           R+  KV+  G +VGR++D++RF  Y +L  +L +MF I G+     +  WQ+V+ D E+D
Sbjct: 541 RSCTKVHMQGMAVGRAVDLTRFDGYEDLLRKLEEMFDINGELCGSTKE-WQVVYTDNEDD 599

Query: 738 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           ++++GDDPW  F S V  I I + E+V+K+
Sbjct: 600 MMMVGDDPWLEFCSIVRKIFIYTAEEVKKL 629


>gi|255573832|ref|XP_002527835.1| Auxin response factor, putative [Ricinus communis]
 gi|223532759|gb|EEF34538.1| Auxin response factor, putative [Ricinus communis]
          Length = 671

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 190/347 (54%), Positives = 249/347 (71%), Gaps = 3/347 (0%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G N  L  ELWHACAGPLV+LP  G RV YFPQGH EQ+ A+ ++ ++  +P++ +LP +
Sbjct: 10  GCNDALYKELWHACAGPLVNLPREGERVYYFPQGHMEQLEASMHQGLEPQMPSF-DLPSK 68

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           ++C++ NV   A+ ETDEVYAQ+TL P  P++ + T     L  P +   + FCKTLTAS
Sbjct: 69  ILCKVVNVQRKAEPETDEVYAQITLLP-DPDQSEVTSPDTPLPEPERCTVHSFCKTLTAS 127

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSV RR A+   P LD S QPP QEL+A DLH  +W FRHIFRGQP+RHLLTT
Sbjct: 128 DTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNQWHFRHIFRGQPRRHLLTT 187

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWSVFVS+K+LVAGD+ +F+  E  +L +G+RR +R  T MPSSV+SS SMH+G+LA A+
Sbjct: 188 GWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQTNMPSSVISSQSMHLGVLATAS 247

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 302
           HA AT + F+VF+ PR S SEF++ + KY++A  H ++SVGMRF+M FE EE   RR+ G
Sbjct: 248 HAIATGTLFSVFYKPRTSRSEFIVSVNKYLEARSH-KLSVGMRFKMRFEGEEVPERRFSG 306

Query: 303 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT 349
           TI G+ D     W++S WRS+KV WDE ++  R  RVS WE+EPL  
Sbjct: 307 TIVGVGDNVSSGWADSEWRSLKVQWDEPSSILRPDRVSSWELEPLVA 353



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 59/90 (65%), Gaps = 2/90 (2%)

Query: 679 RTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 737
           R+  KV+  G +VGR++D++RF  Y +L  +L +MF IEG+        WQ+V+ D E+D
Sbjct: 545 RSCTKVHMQGIAVGRAVDLTRFECYEDLLRKLEEMFDIEGELSG-FSKKWQVVYTDDEDD 603

Query: 738 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           ++++GDDPW  F S V  I I + E+V+++
Sbjct: 604 MMMVGDDPWHEFCSMVRKIFIYTSEEVKRL 633


>gi|407971008|ref|NP_001233765.1| auxin response factor 2 [Solanum lycopersicum]
 gi|85069279|gb|ABC69711.1| auxin response factor 2 [Solanum lycopersicum]
          Length = 846

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 188/364 (51%), Positives = 250/364 (68%), Gaps = 2/364 (0%)

Query: 1   MIGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLP 60
           ++  +  L +ELW +CAGPLV++P  G  V YFPQGH EQV A+TN+  D  +P Y NLP
Sbjct: 33  IVDADTALYTELWRSCAGPLVTVPREGELVYYFPQGHIEQVEASTNQVADQQMPLY-NLP 91

Query: 61  PQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLT 120
            +++C++ NV + A+ +TDEVYAQ+TL P   +++           P +   + FCKTLT
Sbjct: 92  SKILCRVVNVLLKAEPDTDEVYAQVTLMPEPNQDENAVKKEPMRPPPPRFHVHSFCKTLT 151

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
           ASDTSTHGGFSV RR A++  P LD S QPP QEL+A+DLH  EW+FRHIFRGQP+RHLL
Sbjct: 152 ASDTSTHGGFSVLRRHADECLPQLDMSRQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLL 211

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 240
            +GWSVFVS+KRLVAGD+ +F+  E  +L +G+RRA+R     PSSV+SS SMH+G+LA 
Sbjct: 212 QSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNAPSSVISSHSMHLGVLAT 271

Query: 241 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 300
           A HA  T + FTV++ PR SP+EF++P   Y+++V     S+GMRF+M FE EE+  +R+
Sbjct: 272 AWHAIQTKTMFTVYYKPRTSPAEFIVPYDHYMESV-KNNYSIGMRFKMRFEGEEAPEQRF 330

Query: 301 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLR 360
            GTI GI D DP RW  S WR +KV WDE+++  R  RVS W+IEP  + P        R
Sbjct: 331 TGTIVGIEDADPQRWLESKWRCLKVRWDENSSIPRPDRVSPWKIEPALSPPALNVPPVAR 390

Query: 361 LKRP 364
            KRP
Sbjct: 391 PKRP 394



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 63/91 (69%), Gaps = 2/91 (2%)

Query: 678 TRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           TR+  KV+K G+ +GRS+D+++F++Y+EL  EL Q+F   G+ +   +S W +V+ D E 
Sbjct: 719 TRSCTKVHKQGTALGRSVDLAKFNNYDELIAELDQLFDFNGELKARSKS-WLVVYTDDEG 777

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           D++L+GDDPW+ F   V  I I + E+VQ+M
Sbjct: 778 DMMLVGDDPWQEFCGMVRKIFIYTKEEVQRM 808


>gi|449531444|ref|XP_004172696.1| PREDICTED: auxin response factor 2-like, partial [Cucumis sativus]
          Length = 718

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 188/373 (50%), Positives = 261/373 (69%), Gaps = 5/373 (1%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
            L +ELW+ACAGPLVS+P    RV YFPQGH EQV A+T++  D  +P Y NLP +++C+
Sbjct: 40  ALYTELWNACAGPLVSVPRENERVFYFPQGHIEQVEASTSQVADQQMPVY-NLPSKILCR 98

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 126
           + NV + A+ +TDEV+AQ+TL P + +++           P +   + FCKTLTASDTST
Sbjct: 99  VINVHLKAEPDTDEVFAQITLLPEANQDEHAVDKEPPPPPPRRFHVHSFCKTLTASDTST 158

Query: 127 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 186
           HGGFSV RR A++  P LD S QPP QEL+A+DLH  EW+FRHIFRGQP+RHLL +GWSV
Sbjct: 159 HGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 218

Query: 187 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 246
           FVS+KRLVAGD+ +F+  E  +L +G+RRA+R    +PSSV+SS SMH+G+LA A HA +
Sbjct: 219 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQHGNVPSSVISSHSMHLGVLATAWHAIS 278

Query: 247 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 306
           T + FTV++ PR SPSEF++P  +Y++++  +  ++GMRF+M FE EE+  +R+ GTI G
Sbjct: 279 TGTLFTVYYKPRTSPSEFIVPYDQYMESIKKS-YTIGMRFKMRFEGEEAPEQRFTGTIIG 337

Query: 307 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWH 366
             D DP RW +S WR +KV WDE++   R  +VS W+IEP       P+L PL + RP  
Sbjct: 338 CEDADPKRWKDSKWRCLKVRWDETSTISRPEKVSPWKIEPALA---PPALNPLPMTRPKR 394

Query: 367 PSTSSFNDNRDET 379
           P ++  + + D +
Sbjct: 395 PRSNMVSTSPDSS 407


>gi|326512148|dbj|BAJ96055.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326517244|dbj|BAJ99988.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 801

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 193/361 (53%), Positives = 255/361 (70%), Gaps = 10/361 (2%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           L  ELWHACAGPLV++P VG  V YFPQGH EQV A+ N+   + +  Y +LPP+L+C++
Sbjct: 18  LYDELWHACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAGNQMRLY-DLPPKLLCRV 76

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQK---DTFVPIELGIPSKQPTNYFCKTLTASDT 124
            NV + A+ +TDEVYAQ+ L P  PE+ +   D         P +     FCKTLTASDT
Sbjct: 77  INVELKAEADTDEVYAQVMLMP-EPEQNEMAVDKSTSTTGATPPRPAVRSFCKTLTASDT 135

Query: 125 STHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 184
           STHGGFSV RR A++  P LD +  PP QEL+A+DLH ++W+FRHIFRGQP+RHLL +GW
Sbjct: 136 STHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMDWRFRHIFRGQPRRHLLQSGW 195

Query: 185 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHA 244
           SVFVS+KRLVAGD+ +F+  E  +L +G+RRA+R  + +PSSV+SS SMH+G+LA A HA
Sbjct: 196 SVFVSSKRLVAGDAFIFLRGESGELRVGVRRAMRQLSNVPSSVISSHSMHLGVLATAWHA 255

Query: 245 AATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTI 304
             T S FTV++ PR SPSEF+IP  +Y+++V     S+GMRFRM FE EE+  +R+ GTI
Sbjct: 256 INTKSMFTVYYKPRTSPSEFIIPYDQYMESV-KNNYSIGMRFRMRFEGEEAPEQRFTGTI 314

Query: 305 TGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL-RLKR 363
            G  +LD + W  S+WRS+KV WDE +   R  RVS W+IEP ++ P+ P   PL R+KR
Sbjct: 315 VGSENLDQL-WPESNWRSLKVRWDEPSTIPRPDRVSPWKIEPASSPPVNP--LPLSRVKR 371

Query: 364 P 364
           P
Sbjct: 372 P 372



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 44/94 (46%), Positives = 63/94 (67%), Gaps = 2/94 (2%)

Query: 678 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           TR+  KV+K G ++GRS+D+S+F  Y+EL  EL +MF  +G+     R  WQ+V+ D E 
Sbjct: 679 TRSCTKVHKQGVALGRSVDLSKFGDYDELTAELDRMFEFDGELMSSNRD-WQIVYTDPEG 737

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQ 770
           D++L+GDDPWE F S V  I I + E+VQKM  +
Sbjct: 738 DMMLVGDDPWEEFCSIVRKIFIYTKEEVQKMNSK 771


>gi|357520589|ref|XP_003630583.1| Auxin response factor-like protein [Medicago truncatula]
 gi|355524605|gb|AET05059.1| Auxin response factor-like protein [Medicago truncatula]
          Length = 821

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 187/361 (51%), Positives = 251/361 (69%), Gaps = 5/361 (1%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
            L  ELWHACAGPLV++P  G  V YFPQGH EQV A+TN+  + H+P Y +L P+++C+
Sbjct: 43  ALYRELWHACAGPLVTVPREGELVFYFPQGHIEQVEASTNQASEQHMPVY-DLRPKILCR 101

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 126
           + NV + A+ +TDEV+AQ+TL P   +++           P +   + FCKTLTASDTST
Sbjct: 102 VINVMLKAEPDTDEVFAQVTLVPEPNQDENAVEKEAPPAPPPRFHVHSFCKTLTASDTST 161

Query: 127 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 186
           HGGFSV RR A++  P LD S QPP QEL+A+DLH  EW+FRHIFRGQP+RHLL +GWSV
Sbjct: 162 HGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 221

Query: 187 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 246
           FVS+KRLVAGD+ +F+  E  +L +G+RRA+R    +PSSV+SS SMH+G+LA A HA  
Sbjct: 222 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVL 281

Query: 247 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 306
           T + FTV++ PR SP+EF++P  +Y++++     ++GMRF+M FE EE+  +R+ GTI G
Sbjct: 282 TGTMFTVYYKPRTSPAEFIVPYDQYMESL-KNNYTIGMRFKMRFEGEEAPEQRFTGTIVG 340

Query: 307 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWH 366
           I D D  RW  S WR +KV WDE++   R  RVS W+IEP       P+L PL + RP  
Sbjct: 341 IEDSDSKRWPTSKWRCLKVRWDETSNIPRPERVSPWKIEPALA---PPALNPLPMPRPKR 397

Query: 367 P 367
           P
Sbjct: 398 P 398



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 45/110 (40%), Positives = 67/110 (60%), Gaps = 2/110 (1%)

Query: 659 MQDSSELLHNVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEG 717
           +Q S   + +V    Q    R+  KV+K G ++GRS+D+++FS Y+EL  EL Q+F   G
Sbjct: 678 LQTSQPHVKDVQLKPQSGSARSCTKVHKKGIALGRSVDLTKFSDYDELTAELDQLFEFRG 737

Query: 718 KFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           +   P +  W +VF D E D++L+GDDPW+ F S V  I I   E++QKM
Sbjct: 738 ELISPQKD-WLVVFTDNEGDMMLVGDDPWQEFCSMVRKIYIYPKEEIQKM 786


>gi|356543365|ref|XP_003540131.1| PREDICTED: auxin response factor 1-like [Glycine max]
          Length = 665

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 197/369 (53%), Positives = 260/369 (70%), Gaps = 8/369 (2%)

Query: 5   NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLI 64
           N  L  ELWHACAGPLV+LP  G RV YFPQGH EQ+ A+ N+ ++  +P++ NLP +++
Sbjct: 10  NDALYKELWHACAGPLVTLPREGERVYYFPQGHMEQLEASMNQGLEQQMPSF-NLPSKIL 68

Query: 65  CQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNY-FCKTLTASD 123
           C++ NV + A+ ETDEVYAQ+TL P +  +Q +   P +    S + T + FCKTLTASD
Sbjct: 69  CKVVNVHLRAEPETDEVYAQITLLPEA--DQSEVTSPDDPLPESPRCTVHSFCKTLTASD 126

Query: 124 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 183
           TSTHGGFSV RR A+   P LD + QPP QEL+A DLH  EW FRHIFRGQP+RHLLTTG
Sbjct: 127 TSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRHIFRGQPRRHLLTTG 186

Query: 184 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAH 243
           WSVFVS+K+LVAGD+ +F+  E  +L +G+RR +R  + MPSSV+SS SMH+G+LA A+H
Sbjct: 187 WSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQSNMPSSVISSHSMHLGVLATASH 246

Query: 244 AAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGT 303
           A AT + F+VF+ PR S SEF++ + KY++A  H ++SVGMRF+M FE +E   RR+ GT
Sbjct: 247 AIATGTLFSVFYKPRTSRSEFIVSVNKYLEARSH-KLSVGMRFKMRFEGDEVPERRFSGT 305

Query: 304 ITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMY---PSLFPLR 360
           I G+ D     W++S WRS+KV WDE ++  R  RVS WE+EPL + P     PS    R
Sbjct: 306 IVGVGDNKSSVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPLVSTPPTNPQPSQRNKR 365

Query: 361 LKRPWHPST 369
            + P  PST
Sbjct: 366 SRPPILPST 374



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 59/90 (65%), Gaps = 2/90 (2%)

Query: 679 RTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 737
           R+  KV+  G +VGR++D++RF  Y +L  +L +MF I G+     +  WQ+V+ D E+D
Sbjct: 541 RSCTKVHMQGMAVGRAVDLTRFDGYEDLLRKLEEMFDITGELCGSTKK-WQVVYTDNEDD 599

Query: 738 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           ++++GDDPW  F S V  I I + E+V+K+
Sbjct: 600 MMMVGDDPWLEFCSIVRKIFIYTAEEVRKL 629


>gi|158513335|sp|A2ZET6.1|ARFW_ORYSI RecName: Full=Auxin response factor 23; AltName: Full=OsARF1
 gi|125534572|gb|EAY81120.1| hypothetical protein OsI_36300 [Oryza sativa Indica Group]
          Length = 853

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 192/363 (52%), Positives = 255/363 (70%), Gaps = 11/363 (3%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           L +ELW ACAGPLV++P VG +V YFPQGH EQV A+TN+  +  +  Y NLP +++C++
Sbjct: 38  LFTELWSACAGPLVTVPRVGEKVFYFPQGHIEQVEASTNQVGEQRMQLY-NLPWKILCEV 96

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNY-------FCKTLT 120
            NV + A+ +TDEVYAQ+TL P   +++ +     E  +PS     +       FCKTLT
Sbjct: 97  MNVELKAEPDTDEVYAQLTLLPELKQQEDNGSTEEE--VPSAPAAGHVRPRVHSFCKTLT 154

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
           ASDTSTHGGFSV RR A++  P LD S QPP QEL+A+DLH VEW+FRHIFRGQP+RHLL
Sbjct: 155 ASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLL 214

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 240
            +GWSVFVSAKRLVAGD+ +F+  E  +L +G+RRA+R  T +PSSV+SS SMH+G+LA 
Sbjct: 215 QSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISSHSMHLGVLAT 274

Query: 241 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 300
           A HA  T + FTV++ PR SP+EFV+P  +Y++++     S+GMRF+M FE EE+  +R+
Sbjct: 275 AWHAVNTGTMFTVYYKPRTSPAEFVVPYDRYMESL-KRNYSIGMRFKMRFEGEEAPEQRF 333

Query: 301 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLR 360
            GTI G+ D DP  W  S WRS+KV WDE+++  R  RVS W+IEP  + P    L   R
Sbjct: 334 TGTIVGMGDSDPAGWPESKWRSLKVRWDEASSIPRPERVSPWQIEPAVSPPPVNPLPVPR 393

Query: 361 LKR 363
            KR
Sbjct: 394 TKR 396



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 51/137 (37%), Positives = 77/137 (56%), Gaps = 2/137 (1%)

Query: 662 SSELLHNVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFE 720
           S +   N+    Q   TR+  KV+K G ++GRS+D+++F+ Y EL  EL  MF   G+ +
Sbjct: 708 SQQASRNMSCKSQGVSTRSCKKVHKQGIALGRSVDLTKFNGYEELIAELDDMFDFNGELK 767

Query: 721 DPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSG 780
            P +  W +V+ D E D++L+GDDPW  F   V  I I + E+VQ+M    + S S  S 
Sbjct: 768 GPKKE-WMVVYTDNEGDMMLVGDDPWIEFCDMVHKIFIYTREEVQRMNPGTLNSRSEDSH 826

Query: 781 QRANSRGNCGRDPVGSL 797
             +  RG+ GR+  G L
Sbjct: 827 ANSMERGSVGREMRGCL 843


>gi|357520593|ref|XP_003630585.1| Auxin response factor-like protein [Medicago truncatula]
 gi|355524607|gb|AET05061.1| Auxin response factor-like protein [Medicago truncatula]
          Length = 766

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 187/361 (51%), Positives = 251/361 (69%), Gaps = 5/361 (1%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
            L  ELWHACAGPLV++P  G  V YFPQGH EQV A+TN+  + H+P Y +L P+++C+
Sbjct: 43  ALYRELWHACAGPLVTVPREGELVFYFPQGHIEQVEASTNQASEQHMPVY-DLRPKILCR 101

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 126
           + NV + A+ +TDEV+AQ+TL P   +++           P +   + FCKTLTASDTST
Sbjct: 102 VINVMLKAEPDTDEVFAQVTLVPEPNQDENAVEKEAPPAPPPRFHVHSFCKTLTASDTST 161

Query: 127 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 186
           HGGFSV RR A++  P LD S QPP QEL+A+DLH  EW+FRHIFRGQP+RHLL +GWSV
Sbjct: 162 HGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 221

Query: 187 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 246
           FVS+KRLVAGD+ +F+  E  +L +G+RRA+R    +PSSV+SS SMH+G+LA A HA  
Sbjct: 222 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVL 281

Query: 247 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 306
           T + FTV++ PR SP+EF++P  +Y++++     ++GMRF+M FE EE+  +R+ GTI G
Sbjct: 282 TGTMFTVYYKPRTSPAEFIVPYDQYMESL-KNNYTIGMRFKMRFEGEEAPEQRFTGTIVG 340

Query: 307 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWH 366
           I D D  RW  S WR +KV WDE++   R  RVS W+IEP       P+L PL + RP  
Sbjct: 341 IEDSDSKRWPTSKWRCLKVRWDETSNIPRPERVSPWKIEPALA---PPALNPLPMPRPKR 397

Query: 367 P 367
           P
Sbjct: 398 P 398



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 56/90 (62%), Gaps = 2/90 (2%)

Query: 659 MQDSSELLHNVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEG 717
           +Q S   + +V    Q    R+  KV+K G ++GRS+D+++FS Y+EL  EL Q+F   G
Sbjct: 678 LQTSQPHVKDVQLKPQSGSARSCTKVHKKGIALGRSVDLTKFSDYDELTAELDQLFEFRG 737

Query: 718 KFEDPLRSGWQLVFVDRENDVLLLGDDPWE 747
           +   P +  W +VF D E D++L+GDDPW+
Sbjct: 738 ELISPQKD-WLVVFTDNEGDMMLVGDDPWQ 766


>gi|224129786|ref|XP_002328802.1| predicted protein [Populus trichocarpa]
 gi|222839100|gb|EEE77451.1| predicted protein [Populus trichocarpa]
          Length = 662

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 191/347 (55%), Positives = 246/347 (70%), Gaps = 3/347 (0%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G N  L  ELWHACAGPLV+LP  G  V YFPQGH EQ+ A+ ++ ++  +P + NLP +
Sbjct: 18  GCNDALYKELWHACAGPLVTLPREGELVYYFPQGHMEQLEASMHQGMEPQMPLF-NLPSK 76

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           ++C++ NV   A+ ETDEVYAQ+TL P  P++ + T     L  P +   + FCKTLTAS
Sbjct: 77  ILCKVVNVQRRAEPETDEVYAQITLLP-EPDQSEVTSPDPPLPEPERCTVHSFCKTLTAS 135

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSV RR A+   P LD S QPP QEL+A DLH  EW FRHIFRGQP+RHLLTT
Sbjct: 136 DTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNEWHFRHIFRGQPRRHLLTT 195

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWSVFVS+K+LVAGD+ +F+  E  +L +G+RR +R  T MPSSV+SS SMH+G+LA A+
Sbjct: 196 GWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQTNMPSSVISSQSMHLGVLATAS 255

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 302
           HA AT + F+VF+ PR S SEF++ L KY++   H ++SVGMRF+M FE EE   RR+ G
Sbjct: 256 HAIATGTLFSVFYKPRTSRSEFIVSLNKYLEVRNH-KLSVGMRFKMRFEGEEVPERRFSG 314

Query: 303 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT 349
           TI G+ D     W++S WRS+KV WDE ++  R  RVS WE+EPL  
Sbjct: 315 TIVGVGDNISSGWADSDWRSLKVQWDEPSSIMRPERVSHWELEPLVA 361



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 65/111 (58%), Gaps = 10/111 (9%)

Query: 658 CMQDSSELLHNVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIE 716
           C++ S EL        Q    R+  KV+  G +VGR++D+++F  Y +L  +L +MF IE
Sbjct: 525 CLRSSQEL--------QSRQIRSCTKVHMQGVAVGRAVDLTQFKRYEDLLRKLEEMFDIE 576

Query: 717 GKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           G+     +  WQ+V+ D E+D++ +GDDPW  F   V  I I + E+V+++
Sbjct: 577 GELSGSTKK-WQVVYTDNEDDMMKVGDDPWNEFCGMVKKIFIYTSEEVKRL 626


>gi|30027167|gb|AAP06759.1| auxin response factor-like protein [Mangifera indica]
          Length = 840

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 191/363 (52%), Positives = 255/363 (70%), Gaps = 6/363 (1%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           L  ELWHACAGPLV++P  G RV YFPQGH EQV A+TN+  D  +P Y +L  +++C++
Sbjct: 34  LYKELWHACAGPLVTVPRQGERVYYFPQGHIEQVEASTNQFADQQMPIY-DLRSKILCRV 92

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTH 127
            NV + A  +TDEV+AQ+TL P   +++          +  +   + FCKTLTASDTSTH
Sbjct: 93  INVQLKAKPDTDEVFAQITLLPEPNQDENAVEKEPPPPLLPRFHVHSFCKTLTASDTSTH 152

Query: 128 GGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 187
           GGFSV RR AE+  P LD S QPP Q+L+A+DLH  EW+FRHIFRGQP+RHLL +GWSVF
Sbjct: 153 GGFSVLRRHAEECLPELDMSQQPPTQDLVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 212

Query: 188 VSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAAT 247
           VS+KRLVAGD+ +F+  EK +L +G+RRA+R    +PSSV+SS SMH+G+LA A HA +T
Sbjct: 213 VSSKRLVAGDAFIFLRCEK-ELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVST 271

Query: 248 NSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGI 307
            + FTV++ PR SP+EF++P  +Y+++V  +  S+GM F M FE EE+  +RY GTI GI
Sbjct: 272 GTMFTVYYKPRISPAEFIVPFDQYMESV-KSNYSIGMGFEMRFEGEEAPEQRYTGTIVGI 330

Query: 308 SDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWHP 367
            D DP RW +S WR +KV WDE++   R  RVS W+IEP    P+  +L PL L RP  P
Sbjct: 331 EDADPQRWPDSKWRCLKVRWDETSTVPRPERVSPWKIEPALA-PL--ALNPLPLSRPKRP 387

Query: 368 STS 370
            ++
Sbjct: 388 RSN 390



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/113 (38%), Positives = 68/113 (60%), Gaps = 7/113 (6%)

Query: 678 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           +R+  KV+K G ++GRS+D+S+F++Y EL  EL ++F   G+   P +  W +++ D E 
Sbjct: 713 SRSCTKVHKQGIALGRSVDLSKFNNYEELIAELDRLFEFGGELMTP-KKNWLIIYTDDEG 771

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKMG-----EQGVESFSPSSGQRAN 784
           D++L+GDDPW+ F   V  I I + E+VQKM       +G E+ S   G  A 
Sbjct: 772 DIMLVGDDPWKEFCGMVRKIFIYTREEVQKMKPGSSLSKGDENLSIGEGTEAK 824


>gi|357520591|ref|XP_003630584.1| Auxin response factor-like protein [Medicago truncatula]
 gi|355524606|gb|AET05060.1| Auxin response factor-like protein [Medicago truncatula]
          Length = 715

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 187/361 (51%), Positives = 251/361 (69%), Gaps = 5/361 (1%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
            L  ELWHACAGPLV++P  G  V YFPQGH EQV A+TN+  + H+P Y +L P+++C+
Sbjct: 43  ALYRELWHACAGPLVTVPREGELVFYFPQGHIEQVEASTNQASEQHMPVY-DLRPKILCR 101

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 126
           + NV + A+ +TDEV+AQ+TL P   +++           P +   + FCKTLTASDTST
Sbjct: 102 VINVMLKAEPDTDEVFAQVTLVPEPNQDENAVEKEAPPAPPPRFHVHSFCKTLTASDTST 161

Query: 127 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 186
           HGGFSV RR A++  P LD S QPP QEL+A+DLH  EW+FRHIFRGQP+RHLL +GWSV
Sbjct: 162 HGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSV 221

Query: 187 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 246
           FVS+KRLVAGD+ +F+  E  +L +G+RRA+R    +PSSV+SS SMH+G+LA A HA  
Sbjct: 222 FVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVL 281

Query: 247 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 306
           T + FTV++ PR SP+EF++P  +Y++++     ++GMRF+M FE EE+  +R+ GTI G
Sbjct: 282 TGTMFTVYYKPRTSPAEFIVPYDQYMESL-KNNYTIGMRFKMRFEGEEAPEQRFTGTIVG 340

Query: 307 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWH 366
           I D D  RW  S WR +KV WDE++   R  RVS W+IEP       P+L PL + RP  
Sbjct: 341 IEDSDSKRWPTSKWRCLKVRWDETSNIPRPERVSPWKIEPALA---PPALNPLPMPRPKR 397

Query: 367 P 367
           P
Sbjct: 398 P 398


>gi|295844286|gb|ADG43140.1| auxin response factor 6 [Zea mays]
 gi|414587106|tpg|DAA37677.1| TPA: hypothetical protein ZEAMMB73_822305 [Zea mays]
          Length = 657

 Score =  380 bits (977), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 189/366 (51%), Positives = 260/366 (71%), Gaps = 7/366 (1%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTN-KEVDSHIPNYPNLPPQLICQ 66
           L  ELWHACAGPLV++P  G RV YFPQGH EQ+ A+ + +++D ++P + +LPP+++C+
Sbjct: 19  LYQELWHACAGPLVTVPRQGERVYYFPQGHMEQLEASAHHQQLDQYLPMF-DLPPKILCR 77

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 126
           + NV + A+ ++DEVYAQ+ LQP + ++ + T +  E     K   + FCKTLTASDTST
Sbjct: 78  VVNVELRAEADSDEVYAQIMLQPEA-DQNELTSLDAEPQEREKCTAHSFCKTLTASDTST 136

Query: 127 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 186
           HGGFSV RR AE+  P LD S  PP QEL+A+DLH  EW FRHIFRGQPKRHLLTTGWSV
Sbjct: 137 HGGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRHIFRGQPKRHLLTTGWSV 196

Query: 187 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 246
           FVS+KRLV+GD+ +F+  E  +L +G+RR +R    MPSSV+SS SMH+G+LA A+HA +
Sbjct: 197 FVSSKRLVSGDAFIFMRGENGELRVGVRRLMRQVNSMPSSVISSHSMHLGVLATASHAIS 256

Query: 247 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 306
           T + F+VF+ PR S S+F++ + KY++A    ++SVGMRF+M FE +++  RR+ GTI G
Sbjct: 257 TGTLFSVFYKPRTSRSDFIVSVNKYLEAK-KQKISVGMRFKMRFEGDDAPERRFSGTIIG 315

Query: 307 ISDLDPVR---WSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKR 363
           I  L  +    W++S WRS+KV WDE ++  R  R+S WE+EPL          PLR KR
Sbjct: 316 IGSLPAMSKSLWADSDWRSLKVQWDEPSSILRPDRISPWEVEPLDAANPQSPQPPLRAKR 375

Query: 364 PWHPST 369
           P  P++
Sbjct: 376 PRPPAS 381



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 61/91 (67%), Gaps = 2/91 (2%)

Query: 678 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
            R+  KV   G +VGR++D+++ S Y++L ++L +MF I+G+    L+  W+++F D E+
Sbjct: 545 VRSCTKVIMQGMAVGRAVDLTKLSGYSDLCQKLEEMFDIQGELGSTLKK-WRVIFTDDED 603

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           D++L+GDDPW+ F   V  I I + E+ +K+
Sbjct: 604 DMMLVGDDPWDEFCRMVKRIYIYTYEEAKKL 634


>gi|223973945|gb|ACN31160.1| unknown [Zea mays]
 gi|408690390|gb|AFU81655.1| ARF-type transcription factor, partial [Zea mays subsp. mays]
 gi|413937283|gb|AFW71834.1| auxin response factor 1 [Zea mays]
          Length = 677

 Score =  380 bits (976), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 198/370 (53%), Positives = 261/370 (70%), Gaps = 8/370 (2%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
            L  ELWHACAGPLV++P  G  V YFPQGH EQ+ A+T++++D H+P + NLP +++C+
Sbjct: 16  ALFRELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQLDQHLPLF-NLPHKILCK 74

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 126
           + NV + A+ ++DEVYAQ+ LQP + E+ + T    E   P +   + FCKTLTASDTST
Sbjct: 75  VVNVELRAETDSDEVYAQIMLQPQT-EQSEPTSPDPEPPEPERCNIHSFCKTLTASDTST 133

Query: 127 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 186
           HGGFSV RR AE+  P LD +  PP QEL+A+DLH  EW FRHIFRGQP+RHLLTTGWSV
Sbjct: 134 HGGFSVLRRHAEECLPQLDMTQNPPWQELVAKDLHGNEWHFRHIFRGQPRRHLLTTGWSV 193

Query: 187 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 246
           FVS+KRLVAGD+ +F+  E  +L +G+RR +R    MPSSV+SS SMH+G+LA A+HA +
Sbjct: 194 FVSSKRLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHSMHLGVLATASHAIS 253

Query: 247 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 306
           T + F+VF+ PR S SEFV+ + KY++A  H ++SVGMRF+M FE +ES  RR+ GTI G
Sbjct: 254 TGTLFSVFYKPRTSRSEFVVSVNKYLEAKNH-KMSVGMRFKMRFEGDESPERRFSGTIIG 312

Query: 307 ISDLDPVR----WSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 362
           +  + P      W+NS WRS+KV WDE +A  R  RVS WE+EPL      P   PLR K
Sbjct: 313 MGCM-PANSTSPWANSEWRSLKVQWDEPSAILRPDRVSPWEVEPLDRTNPQPPQPPLRNK 371

Query: 363 RPWHPSTSSF 372
           R   P++ S 
Sbjct: 372 RARPPASPSI 381



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 50/160 (31%), Positives = 80/160 (50%), Gaps = 10/160 (6%)

Query: 614 VFGVHIDSSGLLLPTTVSSFTTSVDPGVSSMP-----LGDSGFHNSMYGCMQDSSELLHN 668
           +FG+ I SS +    TV+S      P   S+      L      N        SS+   N
Sbjct: 478 LFGIEIGSSAVSPVVTVASVGHDPPPPALSVDAESDQLSQPSHANKATDAPAASSDRSPN 537

Query: 669 VGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGW 727
             +  Q    R+  KV   G +VGR++D++R   Y++LR +L +MF I G+    L+  W
Sbjct: 538 ETESRQ---ARSCTKVIMQGVAVGRAVDLTRLDGYDDLRRKLEEMFDIPGELSASLKK-W 593

Query: 728 QLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           ++++ D E+D++L+GDDPW  F   V  I I S E+ + +
Sbjct: 594 KVIYTDDEDDMMLVGDDPWSEFCRMVKRIYIYSYEEAKSL 633


>gi|26251300|gb|AAG43286.2|AF140228_1 putative auxin response factor 1 [Oryza sativa Indica Group]
          Length = 857

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 193/364 (53%), Positives = 255/364 (70%), Gaps = 13/364 (3%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           L +ELW ACAGPLV++P VG +  YFPQGH EQV A+TN+  +  +  Y NLP +++C++
Sbjct: 37  LFTELWSACAGPLVTVPRVGEKEFYFPQGHIEQVEASTNQVGEQRMQLY-NLPWKILCEV 95

Query: 68  HNVTMHADVETDEVYAQMTLQP-LSPEEQKDTFVPIELGIPSKQPTNY-------FCKTL 119
            NV + A+ +TDEVYAQ+TL P L  +E   +    E  +PS     +       FCKTL
Sbjct: 96  MNVELKAEPDTDEVYAQLTLLPELKRQEDNGS---TEEEVPSAPAAGHVRPRVHSFCKTL 152

Query: 120 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 179
           TASDTSTHGGFSV RR A++  P LD S QPP QEL+A+DLH VEW+FRHIFRGQP+RHL
Sbjct: 153 TASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHL 212

Query: 180 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLA 239
           L +GWSVFVSAKRLVAGD+ +F+  E  +L +G+RRA+R  T +PSSV+SS SMH+G+LA
Sbjct: 213 LQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISSHSMHLGVLA 272

Query: 240 AAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRR 299
            A HA  T + FTV++ PR SP+EFV+P  +Y++++     S+GMRF+M FE+EE+  +R
Sbjct: 273 TAWHAVNTGTMFTVYYKPRTSPAEFVVPYDRYMESL-KRNYSIGMRFKMRFESEEAPEQR 331

Query: 300 YMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL 359
           + GTI G+ D DP  W  S WRS+KV WDE+++  R  RVS W+IEP  + P    L   
Sbjct: 332 FTGTIVGMGDSDPAGWPESKWRSLKVRWDEASSIPRPERVSPWQIEPAVSPPPVNPLPVP 391

Query: 360 RLKR 363
           R KR
Sbjct: 392 RTKR 395



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/131 (37%), Positives = 74/131 (56%), Gaps = 2/131 (1%)

Query: 668 NVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSG 726
           N+    Q   TR+  KV+K G ++GRS+D+++F+ Y EL  EL  MF   G+ + P +  
Sbjct: 718 NMSCKSQGVSTRSCKKVHKQGIALGRSVDLTKFNGYEELIAELDDMFDFNGELKGPKKE- 776

Query: 727 WQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANSR 786
           W +V+ D E D++L+GDDPW  F   V  I I + E+VQ+M    +   S  S   +  R
Sbjct: 777 WMVVYTDNEGDMMLVGDDPWIEFCDMVHKIFIYTREEVQRMNPGTLNLRSEDSHANSMER 836

Query: 787 GNCGRDPVGSL 797
           G+ GR+  G L
Sbjct: 837 GSVGREMRGCL 847


>gi|295844302|gb|ADG43148.1| auxin response factor 14 [Zea mays]
          Length = 672

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 195/370 (52%), Positives = 258/370 (69%), Gaps = 8/370 (2%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
            L  ELWHACAGPLV++P  G  V YFPQGH EQ+ A+T++++D H+P + +LPP+++C+
Sbjct: 16  ALFRELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQLDQHLPLF-DLPPKILCK 74

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 126
           + NV + A+ ++DEVYAQ+ LQP + ++ + T    E   P +     FCKTLTASDTST
Sbjct: 75  VVNVELRAETDSDEVYAQIMLQPEA-DQSEPTSPDSEPPEPERCNVYSFCKTLTASDTST 133

Query: 127 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 186
           HGGFSV RR AE+  P LD +  PP QEL+A+DLH  EW FRHIFRGQP+RHLLTTGWSV
Sbjct: 134 HGGFSVLRRHAEECLPQLDMTQNPPWQELLAKDLHGNEWHFRHIFRGQPRRHLLTTGWSV 193

Query: 187 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 246
           FVS+KRLVAGD+ +F+  E  +L +G+RR +R    MPSSV+SS +MH+G+LA A+HA +
Sbjct: 194 FVSSKRLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHNMHLGVLATASHAIS 253

Query: 247 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 306
           T + F+VF+ PR S SEFV+ + KY++A  H +VSVGMRF+M FE +ES  RR  GTI G
Sbjct: 254 TGTLFSVFYKPRTSRSEFVVSVNKYLEAKNH-KVSVGMRFKMRFEGDESPERRLSGTIIG 312

Query: 307 ISDLDPVR----WSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 362
           +  + P      W+NS WRS++V WDE +A  R  RVS WE+EPL      P    LR K
Sbjct: 313 LGSM-PANSTSPWANSDWRSLRVQWDEPSAILRPDRVSPWELEPLDATNPQPPQPHLRNK 371

Query: 363 RPWHPSTSSF 372
           R   P+  S 
Sbjct: 372 RARPPALLSI 381



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 57/95 (60%), Gaps = 2/95 (2%)

Query: 678 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
            R+  KV   G +VGR++D++R   Y +L  +L +MF I+G+    L+  W++++ D E+
Sbjct: 541 VRSCTKVIMQGMAVGRAVDLTRLDGYADLHRKLEEMFDIQGELSANLKK-WKVIYTDDED 599

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 771
           D +L+GDDPW  F+  V  I I S E+ + +  + 
Sbjct: 600 DTMLVGDDPWNEFLRMVKRIYIYSYEEAKSLTRKA 634


>gi|140053546|gb|ABO80473.1| AUX/IAA protein; Transcriptional factor B3; Auxin response factor
           [Medicago truncatula]
          Length = 670

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 196/373 (52%), Positives = 260/373 (69%), Gaps = 12/373 (3%)

Query: 5   NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLI 64
           N  L  ELWHACAGPLV+LP  G RV YFPQGH EQ+ A+ N+ ++  +P++ NLP +++
Sbjct: 12  NDALYKELWHACAGPLVTLPREGERVYYFPQGHMEQLEASMNQGLEQQMPSF-NLPSKIL 70

Query: 65  CQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIE-LGIPSKQPTNYFCKTLTASD 123
           C++ N+ + A+ ETDEVYAQ+TL P +  +Q +   P + L  P +   + FCKTLTASD
Sbjct: 71  CKVVNIHLRAEPETDEVYAQITLLPET--DQSEVTSPDDPLPEPPRCTVHSFCKTLTASD 128

Query: 124 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 183
           TSTHGGFSV RR A+   P LD + QPP QEL+A DLH  EW FRHIFRGQP+RHLLTTG
Sbjct: 129 TSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRHIFRGQPRRHLLTTG 188

Query: 184 WSVFVSAKRLVAGDSVLF----IWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLA 239
           WSVFVS+K+LVAGD+ +F    +  E  +L +G+RR +R  + MPSSV+SS SMH+G+LA
Sbjct: 189 WSVFVSSKKLVAGDAFIFLRQVVLGENGELRVGVRRLMRQQSNMPSSVISSHSMHLGVLA 248

Query: 240 AAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRR 299
            A+HA +T + F+VF+ PR S SEF++ + KY++A  H ++SVGMRF+M FE +E   RR
Sbjct: 249 TASHAISTGTLFSVFYKPRTSRSEFIVSINKYLEARNH-KLSVGMRFKMRFEGDEVPERR 307

Query: 300 YMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL 359
           + GTI G+ D     W++S WRS+KV WDE ++  R  RVS WE+EPL + P   S    
Sbjct: 308 FSGTIVGVEDNKSSVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPLVSTPPANSQPTQ 367

Query: 360 RLKR---PWHPST 369
           R KR   P  PST
Sbjct: 368 RNKRSRPPILPST 380



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/111 (36%), Positives = 66/111 (59%), Gaps = 10/111 (9%)

Query: 679 RTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 737
           R+  KV+  G +VGR++D++RF  Y +L  +L +MF IEG+     +  W +V+ D E+D
Sbjct: 546 RSCTKVHMQGMAVGRAVDLTRFDGYEDLLRKLEEMFDIEGELCGATKK-WLVVYTDNEDD 604

Query: 738 VLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANSRGN 788
           ++++GDDPW  F S V  + I +PE+V+K+        SP  G  +N  G 
Sbjct: 605 MMMVGDDPWLEFCSVVRKMFIYTPEEVKKL--------SPKIGLPSNEEGK 647


>gi|168022796|ref|XP_001763925.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162684930|gb|EDQ71329.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 620

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 200/363 (55%), Positives = 252/363 (69%), Gaps = 18/363 (4%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           LN ELWHACAGPL  LP V + V+Y+PQGH EQV A    +V      + NLP  L+C++
Sbjct: 4   LNCELWHACAGPLTQLPPVDSLVMYWPQGHIEQVRAA---DVYQASKQFSNLPAHLLCRI 60

Query: 68  HNVTMHADVETDEVYAQMTLQP---LSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDT 124
             + + AD +TDEV+AQM L P   LS +E KD   PI+     +     FCKTLTASDT
Sbjct: 61  SKIELQADPQTDEVFAQMDLTPQYELS-KETKDAPSPIQ-----QSNVRSFCKTLTASDT 114

Query: 125 STHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 184
           STHGGFSVPRRAAE+  P LD ++ PP QEL+A+DLH  +W FRHI+RG P+RHLLTTGW
Sbjct: 115 STHGGFSVPRRAAEECLPLLDHNMVPPCQELVAKDLHGKDWSFRHIYRGHPRRHLLTTGW 174

Query: 185 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHA 244
           SVFVS KRLVAGD+V+F+  E  QL +G+RRA +      S+  SS ++H+G+LAAA+HA
Sbjct: 175 SVFVSQKRLVAGDTVIFLRGENGQLRVGVRRASKQQPQARSTHFSSANLHLGVLAAASHA 234

Query: 245 AATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTI 304
           A     F+V +NPR SPSEFVIP  KY+++     ++VG RF+M FETEES+ RRY GTI
Sbjct: 235 ATERLRFSVIYNPRTSPSEFVIPYHKYLRSE-DNNLTVGSRFKMKFETEESTERRYSGTI 293

Query: 305 TGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL---TTFPMYPSLFPLRL 361
             ISD+DP++W +S WRS+KV WDES A ER  RVS WEIEPL   +T P  P + P   
Sbjct: 294 VEISDVDPLKWPSSAWRSMKVEWDES-ASERHERVSPWEIEPLVPISTLPT-PPVGPRPK 351

Query: 362 KRP 364
           +RP
Sbjct: 352 RRP 354



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 46/90 (51%), Positives = 63/90 (70%), Gaps = 1/90 (1%)

Query: 675 LTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDR 734
           + P R+  KVY SG VGR++D+ +  SY  LR  L  +FG+EG+ +D +  GWQLV+ D 
Sbjct: 505 VAPVRSGTKVYYSGKVGRTIDLKKCESYAALRRMLASLFGLEGQLDD-VTKGWQLVYTDH 563

Query: 735 ENDVLLLGDDPWEAFVSNVWYIKILSPEDV 764
           ENDVLL+GDDPWE F + V  +K+LSP+D 
Sbjct: 564 ENDVLLVGDDPWEEFCNCVRSLKVLSPQDA 593


>gi|357126622|ref|XP_003564986.1| PREDICTED: auxin response factor 4-like [Brachypodium distachyon]
          Length = 814

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 192/363 (52%), Positives = 256/363 (70%), Gaps = 14/363 (3%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           L +ELWHACAGPLV++P VG  V YFPQGH EQV A+ N+  D+ +  Y +LP +L+C +
Sbjct: 19  LFNELWHACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVADNQMRLY-DLPSKLLCSV 77

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPE-----EQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
            NV + A+ +TDEVYAQ+ L P + +     E+  +     L  P+      FCKTLTAS
Sbjct: 78  INVELKAEADTDEVYAQVMLIPENDQNEMAVEKSSSKAATTLAKPA---VRSFCKTLTAS 134

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSV RR A++  P LD +  PP QEL+A+DLH ++W+FRHIFRGQP+RHLL +
Sbjct: 135 DTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMDWRFRHIFRGQPRRHLLQS 194

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWSVFVS+KRLVAGD+ +F+  E  +L +G+RRA+R  + +PSSV+SS SMH+G+LA A 
Sbjct: 195 GWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRAMRQLSNVPSSVISSHSMHLGVLATAW 254

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 302
           HA  T S FTV++ PR SPSEF+IP  +Y+++V     S+G+RFRM FE EE+  +R+ G
Sbjct: 255 HAINTKSMFTVYYKPRTSPSEFIIPYDQYMESV-KNNYSIGVRFRMRFEGEEAPEQRFTG 313

Query: 303 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL-RL 361
           TI G  +LDP+ W  S WRS+KV WDE +   R  RVS W+IEP ++ P+ P   PL R+
Sbjct: 314 TIIGSENLDPL-WPESSWRSLKVRWDEPSTIPRPDRVSPWKIEPASSPPVNP--LPLSRV 370

Query: 362 KRP 364
           KRP
Sbjct: 371 KRP 373



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/94 (45%), Positives = 66/94 (70%), Gaps = 2/94 (2%)

Query: 678 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           TR+  KV+K G ++GRS+D+S+FS Y+EL+ EL +MF  +G+     ++ WQ+V+ D E+
Sbjct: 692 TRSCTKVHKQGVALGRSVDLSKFSDYDELKAELDKMFEFDGELMSSNKN-WQIVYTDNED 750

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQ 770
           D++L+GDDPW  F S V  I I + E+VQKM  +
Sbjct: 751 DMMLVGDDPWGEFCSIVRKICIYTKEEVQKMNSK 784


>gi|357152661|ref|XP_003576194.1| PREDICTED: auxin response factor 24-like [Brachypodium distachyon]
          Length = 813

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 194/362 (53%), Positives = 251/362 (69%), Gaps = 10/362 (2%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           L +ELW ACAGPLVS+P VG RV YFPQGH EQV A+TN+  +       NLP ++ C++
Sbjct: 20  LYAELWKACAGPLVSVPAVGERVFYFPQGHIEQVEASTNQVAEQQGAPLYNLPWKIPCKV 79

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTF-----VPIELGIPSKQP-TNYFCKTLTA 121
            NV + A+ +TDEVYAQ+TL P    E   T      VP  +    ++P  + FCKTLTA
Sbjct: 80  MNVELKAEQDTDEVYAQLTLLPEKQNEHASTEGEKEEVPAAVPAVHERPRVHSFCKTLTA 139

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSV RR A++  P LD S  PP QEL+ RDLH VEW+FRHIFRGQPKRHLL 
Sbjct: 140 SDTSTHGGFSVLRRHADECLPPLDMSQNPPTQELMTRDLHGVEWRFRHIFRGQPKRHLLQ 199

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           +GWSVFVS KRLVA D+ +F+  E  +L +G+RRA+R    +PSSV+SS SMH+G+LA A
Sbjct: 200 SGWSVFVSNKRLVARDAFIFLRGENGELRVGVRRAMRQQANIPSSVISSHSMHLGVLATA 259

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
            HA  T S FTV++ PR SP+EFV+P   Y +++     S+GMRF+M FE EE++ +R+ 
Sbjct: 260 WHAVNTGSMFTVYYKPRTSPAEFVVPCDLYYESMKRNH-SIGMRFKMRFEGEEAAEQRFT 318

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRL 361
           GTI GI D DP  W++S WRS+KV WDE+++  R  RVS W+IEP  + P+  S+ PL+ 
Sbjct: 319 GTIVGIGDSDPSGWADSKWRSLKVRWDEASSVPRPDRVSPWQIEPAVS-PL--SVNPLQA 375

Query: 362 KR 363
            R
Sbjct: 376 PR 377



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/156 (35%), Positives = 84/156 (53%), Gaps = 6/156 (3%)

Query: 639 PGVSSM--PLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSG-SVGRSLD 695
           PG S +  PL D    +S     Q   E   N+    Q + TR+  KV+K G ++GRS+D
Sbjct: 661 PGTSKLVSPL-DENQSDSAMAKHQTCPEATRNIQSKLQCS-TRSCKKVHKQGIALGRSVD 718

Query: 696 ISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWY 755
           ++RF+ Y+EL  EL +MF   G+ +    + W +V+ D +ND++L+GDDPW  F   V  
Sbjct: 719 LTRFTCYDELIAELDRMFDFGGELKGSCEN-WMVVYTDSDNDMMLVGDDPWNEFCDVVHK 777

Query: 756 IKILSPEDVQKMGEQGVESFSPSSGQRANSRGNCGR 791
           I I + E+V KM    + S S  S   +  RG  G+
Sbjct: 778 IFIYTREEVSKMNPGALVSRSEDSLSASLDRGVVGK 813


>gi|334183431|ref|NP_001185266.1| auxin response factor 1 [Arabidopsis thaliana]
 gi|332195494|gb|AEE33615.1| auxin response factor 1 [Arabidopsis thaliana]
          Length = 660

 Score =  377 bits (969), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 192/363 (52%), Positives = 253/363 (69%), Gaps = 7/363 (1%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           L  ELWHACAGPLV+LP  G RV YFP+GH EQ+ A+ ++ ++  +P++ NLP +++C++
Sbjct: 19  LCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSF-NLPSKILCKV 77

Query: 68  HNVTMHADVETDEVYAQMTLQP-LSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 126
            N+   A+ ETDEVYAQ+TL P L   E      P++   P K   + FCKTLTASDTST
Sbjct: 78  INIQRRAEPETDEVYAQITLLPELDQSEPTSPDAPVQE--PEKCTVHSFCKTLTASDTST 135

Query: 127 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 186
           HGGFSV RR A+   P LD S QPP QEL+A DLH+ EW FRHIFRGQP+RHLLTTGWSV
Sbjct: 136 HGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWSV 195

Query: 187 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 246
           FVS+K+LVAGD+ +F+  E  +L +G+RR +R  T +PSSV+SS SMHIG+LA AAHA  
Sbjct: 196 FVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAIT 255

Query: 247 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 306
           T + F+VF+ PR S SEF++ + +Y++A    ++SVGMRF+M FE EE+  +R+ GTI G
Sbjct: 256 TGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQ-KLSVGMRFKMRFEGEEAPEKRFSGTIVG 314

Query: 307 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT--TFPMYPSLFPLRLKRP 364
           + +     W +S WRS+KV WDE ++  R  RVS WE+EPL   + P      P R KRP
Sbjct: 315 VQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQPPQRNKRP 374

Query: 365 WHP 367
             P
Sbjct: 375 RPP 377



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 61/90 (67%), Gaps = 2/90 (2%)

Query: 679 RTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 737
           R+  KV+  GS VGR++D++R   Y +L ++L +MF I+G+  +  +  WQ+V+ D E+D
Sbjct: 537 RSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLESTKK-WQVVYTDDEDD 595

Query: 738 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           ++++GDDPW  F   V  I I +PE+V+K+
Sbjct: 596 MMMVGDDPWNEFCGMVRKIFIYTPEEVKKL 625


>gi|297840605|ref|XP_002888184.1| hypothetical protein ARALYDRAFT_475338 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297334025|gb|EFH64443.1| hypothetical protein ARALYDRAFT_475338 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 665

 Score =  377 bits (969), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 192/363 (52%), Positives = 254/363 (69%), Gaps = 7/363 (1%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           L +ELWHACAGPLV+LP  G RV YFP+GH EQ+ A+ ++ ++  +P++ NLP +++C++
Sbjct: 19  LCTELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSF-NLPSKILCKV 77

Query: 68  HNVTMHADVETDEVYAQMTLQP-LSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 126
            N+   A+ ETDEVYAQ+TL P L   E      P++   P K   + FCKTLTASDTST
Sbjct: 78  INIQRRAEPETDEVYAQITLLPELDQNEPTSPDAPVQE--PEKCTVHSFCKTLTASDTST 135

Query: 127 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 186
           HGGFSV RR A+   P LD S QPP QEL+A DLH+ EW FRHIFRGQP+RHLLTTGWSV
Sbjct: 136 HGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNNEWHFRHIFRGQPRRHLLTTGWSV 195

Query: 187 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 246
           FVS+K+LVAGD+ +F+  E  +L +G+RR +R  T +PSSV+SS SMHIG+LA AAHA  
Sbjct: 196 FVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAIT 255

Query: 247 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 306
           T + F+VF+ PR S SEF++ + +Y++A    ++SVGMRF+M FE EE+  +R+ GTI G
Sbjct: 256 TGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQ-KLSVGMRFKMRFEGEEAPEKRFSGTIVG 314

Query: 307 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT--TFPMYPSLFPLRLKRP 364
           + +     W +S WRS+KV WDE ++  R  RVS WE+EPL   + P      P R KRP
Sbjct: 315 VQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQPPQRNKRP 374

Query: 365 WHP 367
             P
Sbjct: 375 RPP 377



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 60/90 (66%), Gaps = 2/90 (2%)

Query: 679 RTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 737
           R+  KV+  GS VGR++D++R   Y +L ++L +MF I+G+     +  WQ+V+ D E+D
Sbjct: 542 RSCTKVHMQGSAVGRAVDLTRSECYEDLFKKLEEMFEIKGELLKSTKK-WQVVYTDDEDD 600

Query: 738 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           ++++GDDPW  F   V  I I +PE+V+K+
Sbjct: 601 MMMVGDDPWNEFCGMVRKIFIYTPEEVKKL 630


>gi|15218904|ref|NP_176184.1| auxin response factor 1 [Arabidopsis thaliana]
 gi|79320256|ref|NP_001031208.1| auxin response factor 1 [Arabidopsis thaliana]
 gi|46395894|sp|Q8L7G0.2|ARFA_ARATH RecName: Full=Auxin response factor 1
 gi|5080809|gb|AAD39318.1|AC007258_7 auxin response factor 1 [Arabidopsis thaliana]
 gi|2245378|gb|AAC49751.1| auxin response factor 1 [Arabidopsis thaliana]
 gi|27754247|gb|AAO22577.1| auxin response factor 1 [Arabidopsis thaliana]
 gi|222423864|dbj|BAH19896.1| AT1G59750 [Arabidopsis thaliana]
 gi|332195491|gb|AEE33612.1| auxin response factor 1 [Arabidopsis thaliana]
 gi|332195493|gb|AEE33614.1| auxin response factor 1 [Arabidopsis thaliana]
          Length = 665

 Score =  377 bits (969), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 192/364 (52%), Positives = 253/364 (69%), Gaps = 7/364 (1%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
            L  ELWHACAGPLV+LP  G RV YFP+GH EQ+ A+ ++ ++  +P++ NLP +++C+
Sbjct: 18  ALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSF-NLPSKILCK 76

Query: 67  LHNVTMHADVETDEVYAQMTLQP-LSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTS 125
           + N+   A+ ETDEVYAQ+TL P L   E      P++   P K   + FCKTLTASDTS
Sbjct: 77  VINIQRRAEPETDEVYAQITLLPELDQSEPTSPDAPVQE--PEKCTVHSFCKTLTASDTS 134

Query: 126 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 185
           THGGFSV RR A+   P LD S QPP QEL+A DLH+ EW FRHIFRGQP+RHLLTTGWS
Sbjct: 135 THGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWS 194

Query: 186 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 245
           VFVS+K+LVAGD+ +F+  E  +L +G+RR +R  T +PSSV+SS SMHIG+LA AAHA 
Sbjct: 195 VFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAI 254

Query: 246 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 305
            T + F+VF+ PR S SEF++ + +Y++A    ++SVGMRF+M FE EE+  +R+ GTI 
Sbjct: 255 TTGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQ-KLSVGMRFKMRFEGEEAPEKRFSGTIV 313

Query: 306 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT--TFPMYPSLFPLRLKR 363
           G+ +     W +S WRS+KV WDE ++  R  RVS WE+EPL   + P      P R KR
Sbjct: 314 GVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQPPQRNKR 373

Query: 364 PWHP 367
           P  P
Sbjct: 374 PRPP 377



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 61/90 (67%), Gaps = 2/90 (2%)

Query: 679 RTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 737
           R+  KV+  GS VGR++D++R   Y +L ++L +MF I+G+  +  +  WQ+V+ D E+D
Sbjct: 542 RSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLESTKK-WQVVYTDDEDD 600

Query: 738 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           ++++GDDPW  F   V  I I +PE+V+K+
Sbjct: 601 MMMVGDDPWNEFCGMVRKIFIYTPEEVKKL 630


>gi|30696352|ref|NP_849830.1| auxin response factor 1 [Arabidopsis thaliana]
 gi|332195492|gb|AEE33613.1| auxin response factor 1 [Arabidopsis thaliana]
          Length = 662

 Score =  377 bits (969), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 192/364 (52%), Positives = 253/364 (69%), Gaps = 7/364 (1%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
            L  ELWHACAGPLV+LP  G RV YFP+GH EQ+ A+ ++ ++  +P++ NLP +++C+
Sbjct: 18  ALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSF-NLPSKILCK 76

Query: 67  LHNVTMHADVETDEVYAQMTLQP-LSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTS 125
           + N+   A+ ETDEVYAQ+TL P L   E      P++   P K   + FCKTLTASDTS
Sbjct: 77  VINIQRRAEPETDEVYAQITLLPELDQSEPTSPDAPVQE--PEKCTVHSFCKTLTASDTS 134

Query: 126 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 185
           THGGFSV RR A+   P LD S QPP QEL+A DLH+ EW FRHIFRGQP+RHLLTTGWS
Sbjct: 135 THGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWS 194

Query: 186 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 245
           VFVS+K+LVAGD+ +F+  E  +L +G+RR +R  T +PSSV+SS SMHIG+LA AAHA 
Sbjct: 195 VFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAI 254

Query: 246 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 305
            T + F+VF+ PR S SEF++ + +Y++A    ++SVGMRF+M FE EE+  +R+ GTI 
Sbjct: 255 TTGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQ-KLSVGMRFKMRFEGEEAPEKRFSGTIV 313

Query: 306 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT--TFPMYPSLFPLRLKR 363
           G+ +     W +S WRS+KV WDE ++  R  RVS WE+EPL   + P      P R KR
Sbjct: 314 GVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQPPQRNKR 373

Query: 364 PWHP 367
           P  P
Sbjct: 374 PRPP 377



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 61/90 (67%), Gaps = 2/90 (2%)

Query: 679 RTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 737
           R+  KV+  GS VGR++D++R   Y +L ++L +MF I+G+  +  +  WQ+V+ D E+D
Sbjct: 539 RSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLESTKK-WQVVYTDDEDD 597

Query: 738 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           ++++GDDPW  F   V  I I +PE+V+K+
Sbjct: 598 MMMVGDDPWNEFCGMVRKIFIYTPEEVKKL 627


>gi|291196871|emb|CAX63118.1| ARF4 protein [Amborella trichopoda]
          Length = 748

 Score =  377 bits (969), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 206/384 (53%), Positives = 263/384 (68%), Gaps = 21/384 (5%)

Query: 4   DNKCLNSE----LWHACAGPLVSLPTVGTRVVYFPQGHSEQ-VAATTNKEVDSHIPNYPN 58
           +N C  S     LWHACAGPL SLP  G  VVYFPQGH EQ + A+   E    IP+  +
Sbjct: 11  ENGCCPSSICLVLWHACAGPLTSLPKKGNVVVYFPQGHIEQALTASHLDEQQVQIPSX-H 69

Query: 59  LPPQLICQLHNVTMHADVETDEVYAQMTL-----QPLSPEEQKDTFVPIELGIP--SKQP 111
           LPPQ+ C++ NV +HA+ ETDEVYAQ+TL          E  + + V  E GI    K  
Sbjct: 70  LPPQVFCRVLNVNLHAEPETDEVYAQVTLVPEPEPETESEPAEKSLVEEEEGINLLHKST 129

Query: 112 TNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIF 171
            + FCKTLTASDTSTHGGFSVPRRAAE  FP LD+S Q P+QEL+A+DLH +EWKFRHI+
Sbjct: 130 PHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGIEWKFRHIY 189

Query: 172 RGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPS-SVLSS 230
           RGQP+RHLLTTGWS+FV+ + LV+GD+VLF+  +  +L LGIRRA  P +++P+ SVLS 
Sbjct: 190 RGQPRRHLLTTGWSLFVNQRNLVSGDAVLFLRGDDGELRLGIRRASHPRSIIPTHSVLSG 249

Query: 231 D-SMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRML 289
                + +L+AAA+A ++ S F +F+NPRASPSEFVIP  KYV+ + +  V VGMRF+M 
Sbjct: 250 QWGSQLSVLSAAANAISSKSMFHIFYNPRASPSEFVIPYRKYVRCI-NRPVCVGMRFKMR 308

Query: 290 FETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT 349
           FE E+++ RR  G ITGI D+DP+RW +S WR + V WDE    E + RVS WEIEP + 
Sbjct: 309 FEMEDAAERRCSGVITGIGDIDPLRWPDSKWRCLMVRWDEDIGDEHRVRVSPWEIEP-SV 367

Query: 350 FPMYPSLFPLRLK--RPWHPSTSS 371
            P  P+L   RLK  RP  PS ++
Sbjct: 368 LP--PALNVPRLKKLRPSLPSGAA 389



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 42/90 (46%), Positives = 62/90 (68%), Gaps = 2/90 (2%)

Query: 679 RTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 737
           R+  KV+K GS VGRS+D+S+ + Y++L  EL Q+F +EG   DP   GW++V+ D END
Sbjct: 631 RSCTKVHKHGSAVGRSIDLSKLNGYSDLMSELEQIFNMEGLLHDP-EKGWRVVYTDNEND 689

Query: 738 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           ++L+GDDPW+ F   V  I I + +DV+ M
Sbjct: 690 MVLVGDDPWQEFCDVVCKILICTQDDVENM 719


>gi|255543190|ref|XP_002512658.1| transcription factor, putative [Ricinus communis]
 gi|223548619|gb|EEF50110.1| transcription factor, putative [Ricinus communis]
          Length = 787

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 193/357 (54%), Positives = 258/357 (72%), Gaps = 7/357 (1%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           L  ELWHACAGPLV++P  G  V YFPQGH EQV A+TN+  D  +P Y +LP +++C++
Sbjct: 19  LYKELWHACAGPLVTVPRQGELVFYFPQGHIEQVEASTNQAADEQMPAY-DLPGKILCRV 77

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIE-LGIPSKQPTNYFCKTLTASDTST 126
            NV + A+ +TDEV+AQ+TL P S  EQ +  V  + L  P++   + FCKTLTASDTST
Sbjct: 78  VNVQLKAEPDTDEVFAQITLLPQS--EQDENLVEKKALPAPTRPRVHSFCKTLTASDTST 135

Query: 127 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 186
           HGGFSV RR A++  P LD SLQPPAQEL+A+DL   EW+FRHIFRGQP+RHLL +GWS+
Sbjct: 136 HGGFSVLRRHADECLPPLDMSLQPPAQELVAKDLLGNEWRFRHIFRGQPRRHLLQSGWSL 195

Query: 187 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 246
           FVSAK+LVAGD+ +F+  E  +L +G+RRA+R    +PSS +SS SMHIG+LA A HA +
Sbjct: 196 FVSAKKLVAGDAFIFLRGETGELRVGVRRAMRQSCNVPSSFMSSHSMHIGILATAWHAVS 255

Query: 247 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 306
           T + FTV++ PR SP+EF+IP+ KY+++V     ++GMRF+M FE EE+  +R++GT+ G
Sbjct: 256 TGTMFTVYYKPRTSPAEFIIPMDKYMESV-KNNFTIGMRFKMRFEAEEAPEQRFLGTVIG 314

Query: 307 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKR 363
           +   DP RW  S WR +KV WDE+++  R  RVS WE+EP    P+ P L   RLKR
Sbjct: 315 VEHADPKRWPTSRWRCLKVRWDETSSLHRPDRVSPWEVEPALA-PLDP-LPTCRLKR 369



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 60/92 (65%), Gaps = 2/92 (2%)

Query: 682 VKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 740
           VKV+K G +VGR +D+++F+ YNEL  EL ++F   G+     ++ W + F D E D++L
Sbjct: 677 VKVHKQGIAVGRYVDLTKFNGYNELIAELDRIFEFSGELITSNKN-WLIAFTDDEGDMML 735

Query: 741 LGDDPWEAFVSNVWYIKILSPEDVQKMGEQGV 772
           +GDDPWE F S V  I + + E++ +M ++ +
Sbjct: 736 VGDDPWEEFCSMVRRIFVYTREEINRMNQRSL 767


>gi|291196873|emb|CAX63120.1| ARF4 protein [Amborella trichopoda]
          Length = 638

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 206/384 (53%), Positives = 263/384 (68%), Gaps = 21/384 (5%)

Query: 4   DNKCLNSE----LWHACAGPLVSLPTVGTRVVYFPQGHSEQ-VAATTNKEVDSHIPNYPN 58
           +N C  S     LWHACAGPL SLP  G  VVYFPQGH EQ + A+   E    IP+  +
Sbjct: 11  ENGCCPSSICLVLWHACAGPLTSLPKKGNVVVYFPQGHIEQALTASHLDEQQVQIPSX-H 69

Query: 59  LPPQLICQLHNVTMHADVETDEVYAQMTL-----QPLSPEEQKDTFVPIELGIP--SKQP 111
           LPPQ+ C++ NV +HA+ ETDEVYAQ+TL          E  + + V  E GI    K  
Sbjct: 70  LPPQVFCRVLNVNLHAEPETDEVYAQVTLVPEPEPETESEPAEKSLVEEEEGINLLHKST 129

Query: 112 TNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIF 171
            + FCKTLTASDTSTHGGFSVPRRAAE  FP LD+S Q P+QEL+A+DLH +EWKFRHI+
Sbjct: 130 PHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGIEWKFRHIY 189

Query: 172 RGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPS-SVLSS 230
           RGQP+RHLLTTGWS+FV+ + LV+GD+VLF+  +  +L LGIRRA  P +++P+ SVLS 
Sbjct: 190 RGQPRRHLLTTGWSLFVNQRNLVSGDAVLFLRGDDGELRLGIRRASHPRSIIPTHSVLSG 249

Query: 231 D-SMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRML 289
                + +L+AAA+A ++ S F +F+NPRASPSEFVIP  KYV+ + +  V VGMRF+M 
Sbjct: 250 QWGSQLSVLSAAANAISSKSMFHIFYNPRASPSEFVIPYRKYVRCI-NRPVCVGMRFKMR 308

Query: 290 FETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT 349
           FE E+++ RR  G ITGI D+DP+RW +S WR + V WDE    E + RVS WEIEP + 
Sbjct: 309 FEMEDAAERRCSGVITGIGDIDPLRWPDSKWRCLMVRWDEDIGDEHRVRVSPWEIEP-SV 367

Query: 350 FPMYPSLFPLRLK--RPWHPSTSS 371
            P  P+L   RLK  RP  PS ++
Sbjct: 368 LP--PALNVPRLKKLRPSLPSGAA 389


>gi|379323192|gb|AFD01295.1| auxin response factor 2-3 [Brassica rapa subsp. pekinensis]
          Length = 888

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 188/370 (50%), Positives = 260/370 (70%), Gaps = 5/370 (1%)

Query: 1   MIGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLP 60
           ++     L  ELWHACAGPLV++P    RV YFPQGH EQV A+TN+  +  +P Y +LP
Sbjct: 79  VVDAEAALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLY-DLP 137

Query: 61  PQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLT 120
            +++C++ NV + A+V++DEVYAQ+TL P + +++           P +   + FCKTLT
Sbjct: 138 SKILCRVINVDLKAEVDSDEVYAQITLLPEAIQDENAIEKEAPPPPPPRFQVHSFCKTLT 197

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
           ASDTSTHGGFSV RR A++  P LD S QPP QEL+A+DLH  EW+FRHIFRGQP+RHLL
Sbjct: 198 ASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLL 257

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 240
            +GWSVFVS+KRLVAGD+ +F+  E  +L +G+RRA+R    + SSV+SS SMH+G+LA 
Sbjct: 258 QSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVSSSVISSHSMHLGVLAT 317

Query: 241 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 300
           A HA +T + F+V++ PR SPSEF++P  +Y+++V     S+GMRF+M FE EE+  +R+
Sbjct: 318 AWHAISTGTMFSVYYKPRTSPSEFIVPFDQYMESV-KNNYSIGMRFKMRFEGEEAPEQRF 376

Query: 301 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLR 360
            GTI GI D DP RW+ S WRS+KV WDE+++  R  RVS W++EP       P+L P+ 
Sbjct: 377 TGTIVGIEDSDPTRWAKSKWRSLKVRWDETSSIPRPDRVSPWKLEPALA---PPALSPVP 433

Query: 361 LKRPWHPSTS 370
           + RP  P ++
Sbjct: 434 MPRPKRPRSN 443



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 60/91 (65%), Gaps = 2/91 (2%)

Query: 678 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           +R+  KV K G ++GRS+D+S+F +Y EL  EL +MF   G+   P +  W +V+ D EN
Sbjct: 761 SRSCTKVQKQGIALGRSVDLSKFQNYEELIAELDRMFEFNGELMAP-KKDWLIVYTDDEN 819

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           D++L+GDDPW+ F   V  I I + E+V+KM
Sbjct: 820 DMMLVGDDPWQEFCGMVRKISIYTKEEVRKM 850


>gi|308080234|ref|NP_001183800.1| hypothetical protein [Zea mays]
 gi|238014618|gb|ACR38344.1| unknown [Zea mays]
 gi|407232702|gb|AFT82693.1| ARF14 ARF type transcription factor, partial [Zea mays subsp. mays]
 gi|413922703|gb|AFW62635.1| hypothetical protein ZEAMMB73_114282 [Zea mays]
          Length = 511

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 194/366 (53%), Positives = 257/366 (70%), Gaps = 8/366 (2%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
            L  ELWHACAGPLV++P  G  V YFPQGH EQ+ A+T++++D H+P + +LPP+++C+
Sbjct: 16  ALFRELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQLDQHLPLF-DLPPKILCK 74

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 126
           + NV + A+ ++DEVYAQ+ LQP + ++ + T    E   P +     FCKTLTASDTST
Sbjct: 75  VVNVELRAETDSDEVYAQIMLQPEA-DQSEPTSPDSEPPEPERCNVYSFCKTLTASDTST 133

Query: 127 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 186
           HGGFSV RR AE+  P LD +  PP QEL+A+DLH  EW FRHIFRGQP+RHLLTTGWSV
Sbjct: 134 HGGFSVLRRHAEECLPQLDMTQNPPWQELLAKDLHGNEWHFRHIFRGQPRRHLLTTGWSV 193

Query: 187 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 246
           FVS+KRLVAGD+ +F+  E  +L +G+RR +R    MPSSV+SS +MH+G+LA A+HA +
Sbjct: 194 FVSSKRLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHNMHLGVLATASHAIS 253

Query: 247 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 306
           T + F+VF+ PR S SEFV+ + KY++A  H +VSVGMRF+M FE +ES  RR  GTI G
Sbjct: 254 TGTLFSVFYKPRTSRSEFVVSVNKYLEAKNH-KVSVGMRFKMRFEGDESPERRLSGTIIG 312

Query: 307 ISDLDPVR----WSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 362
           +  + P      W+NS WRS++V WDE +A  R  RVS WE+EPL      P    LR K
Sbjct: 313 LGSM-PANSTSPWANSDWRSLRVQWDEPSAILRPDRVSPWELEPLDATNPQPPQPHLRNK 371

Query: 363 RPWHPS 368
           R   P+
Sbjct: 372 RARPPA 377


>gi|225465265|ref|XP_002268348.1| PREDICTED: auxin response factor 1 [Vitis vinifera]
 gi|297739458|emb|CBI29640.3| unnamed protein product [Vitis vinifera]
          Length = 678

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 190/344 (55%), Positives = 250/344 (72%), Gaps = 5/344 (1%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQV-AATTNKEVDSHIPNYPNLPPQLICQ 66
           L  ELWHACAGPLV++P  G RV YFPQGH EQ+ A+TT++ +D  +P++ NLP +++C+
Sbjct: 22  LYKELWHACAGPLVTVPREGERVYYFPQGHMEQLEASTTHQGLDQQMPSF-NLPSKILCK 80

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 126
           + +V + A+ ETDEVYAQ+TL P  P++ + T     L  P +   + FCKTLTASDTST
Sbjct: 81  VVHVQLRAEPETDEVYAQVTLLP-EPDQSEITSPDPPLPEPQRCTVHSFCKTLTASDTST 139

Query: 127 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 186
           HGGFSV RR A+   P LD S QPP QEL+A DLH  EW FRHIFRGQP+RHLLTTGWSV
Sbjct: 140 HGGFSVLRRHADDCLPPLDMSQQPPWQELVAADLHGNEWHFRHIFRGQPRRHLLTTGWSV 199

Query: 187 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 246
           FVS+K+LVAGD+ +F+  E  +L +G+RR +R  + MPSSV+SS SMH+G+LA A+HA +
Sbjct: 200 FVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQLSNMPSSVISSHSMHLGVLATASHAIS 259

Query: 247 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 306
           T + F+VF+ PR S SEF++ L KY++A  H ++SVGMRF+M FE EE   RR+ GTI G
Sbjct: 260 TGTLFSVFYKPRTSRSEFIVSLNKYLEARNH-KLSVGMRFKMRFEGEEVPERRFSGTIVG 318

Query: 307 ISDLDPVR-WSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT 349
           + D +    W++S WRS+KV WDE  +  R  RVS WE+EPL  
Sbjct: 319 VGDKNTSSGWADSEWRSLKVQWDEPASIFRPERVSAWELEPLVA 362



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 37/90 (41%), Positives = 62/90 (68%), Gaps = 2/90 (2%)

Query: 679 RTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 737
           R+  KV+  G +VGR++D++RF  Y +L ++L +MF I+G+    L S WQ+V+ D E+D
Sbjct: 553 RSCTKVHMQGIAVGRAVDLTRFDRYEDLLKKLEEMFDIQGELCG-LTSIWQVVYTDDEDD 611

Query: 738 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           ++++GDDPW  F S V  I I + E+V+++
Sbjct: 612 MMMVGDDPWLEFCSMVRKIFIYTAEEVKRL 641


>gi|295844324|gb|ADG43159.1| auxin response factor 25 [Zea mays]
          Length = 801

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 192/360 (53%), Positives = 252/360 (70%), Gaps = 9/360 (2%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           L  ELW ACAGPLV++P VG  V YFPQGH EQV A+ N+   + +  Y +LP +L+C++
Sbjct: 15  LYPELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAGNPMRLY-DLPSKLLCRV 73

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELG--IPSKQPTNYFCKTLTASDTS 125
            NV + A+ +TDEVYAQ+ L P  PE+          G   P +     FCKTLTASDTS
Sbjct: 74  LNVELKAETDTDEVYAQIMLMP-EPEQNDVAAEKTSSGSAAPPRPAVRSFCKTLTASDTS 132

Query: 126 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 185
           THGGFSV RR A++  P+LD S  PP QEL+A+DLH +EW+FRHIFRGQP+RHLL +GWS
Sbjct: 133 THGGFSVLRRHADECLPALDMSQSPPTQELVAKDLHGMEWRFRHIFRGQPRRHLLQSGWS 192

Query: 186 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 245
           VFVS+KRLVAGD+ +F+  E  +L +G+RRA+R  + +PSSV+SS SMH+G+LA A HA 
Sbjct: 193 VFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVLATAWHAI 252

Query: 246 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 305
            T S FTV++ PR SPSEF+IP  +Y+++V     S+GMRFRM FE EE+  +R+ GTI 
Sbjct: 253 NTKSMFTVYYKPRTSPSEFIIPYDQYMESV-KNNYSIGMRFRMRFEGEEAPEQRFTGTIV 311

Query: 306 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL-RLKRP 364
           G  +LDP+ W +S WR +KV WDE +   R  +VS W+IEP ++ P+ P   PL R KRP
Sbjct: 312 GCENLDPL-WPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEPASSPPVNP--LPLSRGKRP 368



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 44/94 (46%), Positives = 65/94 (69%), Gaps = 2/94 (2%)

Query: 678 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           TR+  KV+K G ++GRS+D+S+F+ Y EL+ EL +MF  EG+     R+ WQ+V+ D E 
Sbjct: 686 TRSCTKVHKQGVALGRSVDLSKFTDYGELKAELDKMFEFEGELVSANRN-WQIVYTDNEG 744

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQ 770
           D++L+GDDPWE F + V  I I + E+VQKM  +
Sbjct: 745 DMMLVGDDPWEEFCNIVRKIYIYTKEEVQKMNSK 778


>gi|242085500|ref|XP_002443175.1| hypothetical protein SORBIDRAFT_08g014320 [Sorghum bicolor]
 gi|241943868|gb|EES17013.1| hypothetical protein SORBIDRAFT_08g014320 [Sorghum bicolor]
          Length = 839

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 189/365 (51%), Positives = 251/365 (68%), Gaps = 15/365 (4%)

Query: 11  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 70
           ELW ACAGPL S+P +G +V YFPQGH EQV A+TN+  +       NLP ++ C+L N+
Sbjct: 30  ELWKACAGPLSSVPPLGEKVYYFPQGHIEQVEASTNQIAEQQGTPLYNLPWKIPCKLMNI 89

Query: 71  TMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGI-----PSKQPTN------YFCKTL 119
            + A+ +TDEVYAQ+TL P   +++  +             P   PTN       FCKTL
Sbjct: 90  ELKAEPDTDEVYAQLTLLPDKKQDENTSTTVENEEAEEEVVPHAPPTNEGPRIHSFCKTL 149

Query: 120 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 179
           TASDTSTHGGFSV RR A++  P LD S  PP QEL+A+DLH +EW+FRHIFRGQP+RHL
Sbjct: 150 TASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGIEWRFRHIFRGQPRRHL 209

Query: 180 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLA 239
           L +GWSVFVSAKRLVAGD+ +F+  E  +L +G+RRA+R  T +PSSV+SS SMH+G+LA
Sbjct: 210 LQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHSMHLGVLA 269

Query: 240 AAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRR 299
            A HA  T S FTV++ PR SP+EFV+   +Y +++     S+GMRF+M FE EE++ +R
Sbjct: 270 TAWHAVNTGSMFTVYYKPRTSPAEFVVSRDRYYESL-KRNYSIGMRFKMRFEGEEAAEQR 328

Query: 300 YMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYPSLFP 358
           + GTI GI   DP  W++S WRS+KV WDE+++  R  RVS W+IEP ++  P+ P   P
Sbjct: 329 FTGTIVGIGASDPSGWADSKWRSLKVRWDEASSVPRPERVSPWQIEPAISPSPVNP--LP 386

Query: 359 LRLKR 363
           +R KR
Sbjct: 387 VRFKR 391



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 55/157 (35%), Positives = 88/157 (56%), Gaps = 3/157 (1%)

Query: 638 DPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGS-VGRSLDI 696
           DP  +  P  D    +S+    Q   E   N+    Q + TR+  KV+K GS +GRS+D+
Sbjct: 670 DPSKTVKPF-DGPQSDSITENNQPCPEATQNIQNKVQSSSTRSCKKVHKQGSALGRSIDL 728

Query: 697 SRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYI 756
           ++F+ Y+EL  EL QMF  +G+ ++P ++ W +V+ D E D++L+GDDPW  F   V  I
Sbjct: 729 TKFTCYDELIAELDQMFDFDGELKNPCKN-WLVVYTDNEGDIMLVGDDPWNEFCDMVHKI 787

Query: 757 KILSPEDVQKMGEQGVESFSPSSGQRANSRGNCGRDP 793
            I + E+V++M    + S S  S   +  RG   ++P
Sbjct: 788 FIYTREEVERMNPGALNSRSEDSLSDSQGRGLASKEP 824


>gi|242055485|ref|XP_002456888.1| hypothetical protein SORBIDRAFT_03g044630 [Sorghum bicolor]
 gi|241928863|gb|EES02008.1| hypothetical protein SORBIDRAFT_03g044630 [Sorghum bicolor]
          Length = 704

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 190/360 (52%), Positives = 249/360 (69%), Gaps = 8/360 (2%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           L  ELW ACAGPLV++P VG  V YFPQGH EQV A+ N+   + +  Y +LP +L+C++
Sbjct: 21  LYPELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAGNQMRLY-DLPSKLLCRV 79

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQP---TNYFCKTLTASDT 124
            NV + A+ +TDEVYAQ+ L P    EQ D          +  P      FCKTLTASDT
Sbjct: 80  LNVELKAETDTDEVYAQIMLMPEP--EQTDVAAEKASSASAASPRPAVRSFCKTLTASDT 137

Query: 125 STHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 184
           STHGGFSV RR A++  P LD +  PP QEL+A+DLH +EW+FRHIFRGQP+RHLL +GW
Sbjct: 138 STHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMEWRFRHIFRGQPRRHLLQSGW 197

Query: 185 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHA 244
           SVFVS+KRLVAGD+ +F+  E  +L +G+RRA+R  + +PSSV+SS SMH+G+LA A HA
Sbjct: 198 SVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVLATAWHA 257

Query: 245 AATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTI 304
             T S FTV++ PR SPSEF+IP  +Y+++V     S+GMRFRM FE EE+  +R+ GTI
Sbjct: 258 INTKSMFTVYYKPRTSPSEFIIPYDQYMESV-KNNYSIGMRFRMRFEGEEAPEQRFTGTI 316

Query: 305 TGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRP 364
            G  +LDP+ W +S WR +KV WDE +   R  RVS W+IEP ++ P+ P     R+KRP
Sbjct: 317 VGCENLDPL-WPDSSWRYLKVRWDEPSTIPRPDRVSPWKIEPASSPPVNPLPLSSRVKRP 375


>gi|224030853|gb|ACN34502.1| unknown [Zea mays]
 gi|413951417|gb|AFW84066.1| hypothetical protein ZEAMMB73_313624 [Zea mays]
          Length = 806

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 192/360 (53%), Positives = 252/360 (70%), Gaps = 9/360 (2%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           L  ELW ACAGPLV++P VG  V YFPQGH EQV A+ N+   + +  Y +LP +L+C++
Sbjct: 20  LYPELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAGNPMRLY-DLPSKLLCRV 78

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELG--IPSKQPTNYFCKTLTASDTS 125
            NV + A+ +TDEVYAQ+ L P  PE+          G   P +     FCKTLTASDTS
Sbjct: 79  LNVELKAETDTDEVYAQIMLMP-EPEQNDVAAEKTSSGSAAPPRPAVRSFCKTLTASDTS 137

Query: 126 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 185
           THGGFSV RR A++  P+LD S  PP QEL+A+DLH +EW+FRHIFRGQP+RHLL +GWS
Sbjct: 138 THGGFSVLRRHADECLPALDMSQSPPTQELVAKDLHGMEWRFRHIFRGQPRRHLLQSGWS 197

Query: 186 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 245
           VFVS+KRLVAGD+ +F+  E  +L +G+RRA+R  + +PSSV+SS SMH+G+LA A HA 
Sbjct: 198 VFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVLATAWHAI 257

Query: 246 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 305
            T S FTV++ PR SPSEF+IP  +Y+++V     S+GMRFRM FE EE+  +R+ GTI 
Sbjct: 258 NTKSMFTVYYKPRTSPSEFIIPYDQYMESV-KNNYSIGMRFRMRFEGEEAPEQRFTGTIV 316

Query: 306 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL-RLKRP 364
           G  +LDP+ W +S WR +KV WDE +   R  +VS W+IEP ++ P+ P   PL R KRP
Sbjct: 317 GCENLDPL-WPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEPASSPPVNP--LPLSRGKRP 373



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 44/94 (46%), Positives = 65/94 (69%), Gaps = 2/94 (2%)

Query: 678 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           TR+  KV+K G ++GRS+D+S+F+ Y EL+ EL +MF  EG+     R+ WQ+V+ D E 
Sbjct: 691 TRSCTKVHKQGVALGRSVDLSKFTDYGELKAELDKMFEFEGELVSANRN-WQIVYTDNEG 749

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQ 770
           D++L+GDDPWE F + V  I I + E+VQKM  +
Sbjct: 750 DMMLVGDDPWEEFCNIVRKIYIYTKEEVQKMNSK 783


>gi|413951418|gb|AFW84067.1| hypothetical protein ZEAMMB73_313624 [Zea mays]
 gi|413951419|gb|AFW84068.1| hypothetical protein ZEAMMB73_313624 [Zea mays]
          Length = 812

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 192/360 (53%), Positives = 252/360 (70%), Gaps = 9/360 (2%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           L  ELW ACAGPLV++P VG  V YFPQGH EQV A+ N+   + +  Y +LP +L+C++
Sbjct: 20  LYPELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAGNPMRLY-DLPSKLLCRV 78

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELG--IPSKQPTNYFCKTLTASDTS 125
            NV + A+ +TDEVYAQ+ L P  PE+          G   P +     FCKTLTASDTS
Sbjct: 79  LNVELKAETDTDEVYAQIMLMP-EPEQNDVAAEKTSSGSAAPPRPAVRSFCKTLTASDTS 137

Query: 126 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 185
           THGGFSV RR A++  P+LD S  PP QEL+A+DLH +EW+FRHIFRGQP+RHLL +GWS
Sbjct: 138 THGGFSVLRRHADECLPALDMSQSPPTQELVAKDLHGMEWRFRHIFRGQPRRHLLQSGWS 197

Query: 186 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 245
           VFVS+KRLVAGD+ +F+  E  +L +G+RRA+R  + +PSSV+SS SMH+G+LA A HA 
Sbjct: 198 VFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVLATAWHAI 257

Query: 246 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 305
            T S FTV++ PR SPSEF+IP  +Y+++V     S+GMRFRM FE EE+  +R+ GTI 
Sbjct: 258 NTKSMFTVYYKPRTSPSEFIIPYDQYMESV-KNNYSIGMRFRMRFEGEEAPEQRFTGTIV 316

Query: 306 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL-RLKRP 364
           G  +LDP+ W +S WR +KV WDE +   R  +VS W+IEP ++ P+ P   PL R KRP
Sbjct: 317 GCENLDPL-WPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEPASSPPVNP--LPLSRGKRP 373



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 43/100 (43%), Positives = 65/100 (65%), Gaps = 8/100 (8%)

Query: 678 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           TR+  KV+K G ++GRS+D+S+F+ Y EL+ EL +MF  EG+     R+ WQ+V+ D E 
Sbjct: 691 TRSCTKVHKQGVALGRSVDLSKFTDYGELKAELDKMFEFEGELVSANRN-WQIVYTDNEG 749

Query: 737 DVLLLGDDPWE------AFVSNVWYIKILSPEDVQKMGEQ 770
           D++L+GDDPW+       F + V  I I + E+VQKM  +
Sbjct: 750 DMMLVGDDPWDPLLTSREFCNIVRKIYIYTKEEVQKMNSK 789


>gi|379323186|gb|AFD01292.1| auxin response factor 1 [Brassica rapa subsp. pekinensis]
          Length = 665

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 192/366 (52%), Positives = 256/366 (69%), Gaps = 14/366 (3%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           L  ELWHACAGPLV+LP  G RV YFP+GH EQ+ A+ ++ ++  +P++ NLP +++C++
Sbjct: 19  LCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSF-NLPSKILCKV 77

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQP----TNYFCKTLTASD 123
            N+   A+ ETDEVYAQ+TL P     + D   P+    P ++P     + FCKTLTASD
Sbjct: 78  INIQRRAEPETDEVYAQITLLP-----EADQSEPMSPDAPVQEPEKCTVHSFCKTLTASD 132

Query: 124 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 183
           TSTHGGFSV RR A+   P LD S QPP QEL+A DLH+ EW FRHIFRGQP+RHLLTTG
Sbjct: 133 TSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNNEWHFRHIFRGQPRRHLLTTG 192

Query: 184 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAH 243
           WSVFVS+K+LVAGD+ +F+  E  +L +G+RR +R  T +PSSV+SS SMHIG+LA AAH
Sbjct: 193 WSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAH 252

Query: 244 AAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGT 303
           A  T + F+VF+ PR S SEF++ + +Y++A  + +++VGMRF+M FE EE+  +R+ GT
Sbjct: 253 AITTGTIFSVFYKPRTSRSEFIVSVNRYLEAK-NQKLAVGMRFKMRFEGEEAPEKRFSGT 311

Query: 304 ITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS--LFPLRL 361
           I G+ +     W +S WRS+KV WDE ++  R  RVS WE+EPL      PS  L P R 
Sbjct: 312 IVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVAN-NTPSAHLPPQRN 370

Query: 362 KRPWHP 367
           KRP  P
Sbjct: 371 KRPRPP 376



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/98 (38%), Positives = 63/98 (64%), Gaps = 2/98 (2%)

Query: 671 QIDQLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQL 729
           Q  Q    R+  KV+  GS VGR++D++R   Y +L ++L +MF I+G+  +  +  WQ+
Sbjct: 534 QKSQSRQIRSCTKVHMQGSAVGRAVDLTRSECYEDLFKKLEEMFDIKGELLESTKK-WQV 592

Query: 730 VFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           V+ D E+D++++GDDPW  F   V  I I +PE+V+K+
Sbjct: 593 VYTDDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKL 630


>gi|122204131|sp|Q2QQX6.1|ARFX_ORYSJ RecName: Full=Auxin response factor 24
 gi|77555450|gb|ABA98246.1| Auxin response factor 2, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 841

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 192/366 (52%), Positives = 248/366 (67%), Gaps = 15/366 (4%)

Query: 11  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 70
           ELW ACAGPLV++P VG RV Y PQGH EQV A+TN+  +       NLP ++ C++ NV
Sbjct: 32  ELWRACAGPLVTVPAVGERVFYLPQGHIEQVEASTNQVAEQQGAPLYNLPWKIPCKVMNV 91

Query: 71  TMHADVETDEVYAQMTLQPLSPEE---------QKDTFVPIELGIPS---KQPTNYFCKT 118
            + A+ +TDEVYAQ+TL P   ++          KD     E+  P+   +   + FCKT
Sbjct: 92  ELKAEPDTDEVYAQLTLLPEKQQDGNGSGNGNVSKDKVEEEEVVPPAATERPRVHSFCKT 151

Query: 119 LTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRH 178
           LTASDTSTHGGFSV RR A++  P LD S  PP QEL+A+DLH VEW+FRHIFRGQP+RH
Sbjct: 152 LTASDTSTHGGFSVLRRHADECLPPLDMSQHPPTQELVAKDLHGVEWRFRHIFRGQPRRH 211

Query: 179 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLL 238
           LL +GWSVFVSAKRLVAGD+ +F+  E  +L +G+RRA+R    +PSSV+SS SMH+G+L
Sbjct: 212 LLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQANIPSSVISSHSMHLGVL 271

Query: 239 AAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVR 298
           A A HA  T + FTV++ PR SPSEFV+P   Y K       S+GMRF+M FE EE++ +
Sbjct: 272 ATAWHAVNTGTMFTVYYKPRTSPSEFVVPRDLY-KESLKRNHSIGMRFKMTFEGEEAAEQ 330

Query: 299 RYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSLF 357
           R+ GTI G+ D DP  W++S WRS+KV WDE+ +  R  RVS W+IEP  +  P+ P   
Sbjct: 331 RFTGTIVGVGDSDPSGWADSKWRSLKVRWDEAASVPRPDRVSPWQIEPANSPSPVNPLPA 390

Query: 358 PLRLKR 363
           P R KR
Sbjct: 391 P-RTKR 395



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 99/200 (49%), Gaps = 17/200 (8%)

Query: 613 VVFGVHIDSSG----LLLPTTVS----------SFTTSVDPGVSSMPLGDSGFHNSMYGC 658
           ++FG+ +DS      L+ P +V+                DP  +  PL D   H+S    
Sbjct: 634 MLFGISLDSPAKPELLISPPSVAFDGKLQQDALEEDECSDPSKTVKPL-DGAQHDSAREK 692

Query: 659 MQDSSELLHNVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEG 717
            Q   +   N+    Q   +R+  KV+K G ++GRS+D+++F+ Y+EL  EL QMF   G
Sbjct: 693 HQSCPDGTKNIQSKQQNGSSRSCKKVHKQGIALGRSIDLTKFTCYDELIAELDQMFDFNG 752

Query: 718 KFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSP 777
           +     ++ W +V+ D E D++L+GDDPW  F + V  I I + E+VQKM    + S S 
Sbjct: 753 ELNSSSKN-WMVVYTDNEGDMMLVGDDPWNEFCNMVHKIFIYTREEVQKMNPGALNSRSE 811

Query: 778 SSGQRANSRGNCGRDPVGSL 797
            S   +  RG  G    G L
Sbjct: 812 DSRSTSVERGLVGEGLQGGL 831


>gi|359493580|ref|XP_003634630.1| PREDICTED: auxin response factor 1-like isoform 2 [Vitis vinifera]
          Length = 640

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 193/367 (52%), Positives = 254/367 (69%), Gaps = 5/367 (1%)

Query: 5   NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLI 64
           N  L  ELWHACAGPLV++P    RV YFPQGH EQ+ A+ ++ +D  +P++ NLP +++
Sbjct: 16  NDALYKELWHACAGPLVNVPREQERVYYFPQGHMEQLEASMHQGLDQKMPSF-NLPSKIL 74

Query: 65  CQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDT 124
           C++ NV + A+ ETDEVYAQ+TL P  P++ + T     L  P     + FCKTLTASDT
Sbjct: 75  CKVVNVHLRAEPETDEVYAQVTLLP-EPDQSEITSPDPPLPEPQSCTVHSFCKTLTASDT 133

Query: 125 STHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 184
           STHGGFSV RR A++  P LD S  PP QEL+A+DLH  EW FRHIFRGQP+RHLLTTGW
Sbjct: 134 STHGGFSVLRRHADECLPPLDMSQNPPWQELVAKDLHGNEWHFRHIFRGQPRRHLLTTGW 193

Query: 185 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHA 244
           SVFVS+KRL AGD+ +F+  E  +L +G+RR +R    +P SV+SS SMH+G+LA A+HA
Sbjct: 194 SVFVSSKRLAAGDAFIFLRGENGELRVGVRRLMRQLNNVPPSVISSHSMHLGVLATASHA 253

Query: 245 AATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTI 304
             T + F+VF+ P  SPSEF++ + KY++A  H +VSVGMRF+M FE +E+  RR+ GTI
Sbjct: 254 ITTGTLFSVFYKP--SPSEFIVSVNKYLEARNH-KVSVGMRFKMRFEGDEAPERRFSGTI 310

Query: 305 TGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRP 364
            G+ D     W++S WRS+KV WDE ++  R  RVS WE+EPL T     +    R KRP
Sbjct: 311 VGVGDTGSSGWTDSEWRSLKVQWDEPSSILRPERVSPWELEPLVTETPLTAQPMQRSKRP 370

Query: 365 WHPSTSS 371
             P  SS
Sbjct: 371 RSPVLSS 377



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 38/90 (42%), Positives = 63/90 (70%), Gaps = 2/90 (2%)

Query: 679 RTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 737
           R+  KV+  G +VGR++D+++FSSY EL  +L +MF I+G+   P +  WQ+V+ D E+D
Sbjct: 516 RSCTKVHMQGMAVGRAVDLTQFSSYKELLSKLEEMFDIKGELCGPTKK-WQVVYTDDEDD 574

Query: 738 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           ++++GDDPW  F S V  I I + E+V+++
Sbjct: 575 MMMVGDDPWHEFCSMVRKIFIYTVEEVKEL 604


>gi|413951416|gb|AFW84065.1| hypothetical protein ZEAMMB73_313624 [Zea mays]
          Length = 728

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 192/360 (53%), Positives = 252/360 (70%), Gaps = 9/360 (2%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           L  ELW ACAGPLV++P VG  V YFPQGH EQV A+ N+   + +  Y +LP +L+C++
Sbjct: 20  LYPELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAGNPMRLY-DLPSKLLCRV 78

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELG--IPSKQPTNYFCKTLTASDTS 125
            NV + A+ +TDEVYAQ+ L P  PE+          G   P +     FCKTLTASDTS
Sbjct: 79  LNVELKAETDTDEVYAQIMLMP-EPEQNDVAAEKTSSGSAAPPRPAVRSFCKTLTASDTS 137

Query: 126 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 185
           THGGFSV RR A++  P+LD S  PP QEL+A+DLH +EW+FRHIFRGQP+RHLL +GWS
Sbjct: 138 THGGFSVLRRHADECLPALDMSQSPPTQELVAKDLHGMEWRFRHIFRGQPRRHLLQSGWS 197

Query: 186 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 245
           VFVS+KRLVAGD+ +F+  E  +L +G+RRA+R  + +PSSV+SS SMH+G+LA A HA 
Sbjct: 198 VFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVLATAWHAI 257

Query: 246 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 305
            T S FTV++ PR SPSEF+IP  +Y+++V     S+GMRFRM FE EE+  +R+ GTI 
Sbjct: 258 NTKSMFTVYYKPRTSPSEFIIPYDQYMESV-KNNYSIGMRFRMRFEGEEAPEQRFTGTIV 316

Query: 306 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL-RLKRP 364
           G  +LDP+ W +S WR +KV WDE +   R  +VS W+IEP ++ P+ P   PL R KRP
Sbjct: 317 GCENLDPL-WPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEPASSPPVNP--LPLSRGKRP 373


>gi|413920955|gb|AFW60887.1| auxin response factor [Zea mays]
          Length = 849

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 184/367 (50%), Positives = 257/367 (70%), Gaps = 8/367 (2%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           + +ELW+ CAGPLV++P VG +V YFPQGH EQV A+TN+  + H+  Y +LP +++C++
Sbjct: 39  MYTELWNLCAGPLVTVPRVGDKVYYFPQGHIEQVEASTNQVAEQHMQFY-DLPWKILCEV 97

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPS---KQPTNYFCKTLTASDT 124
            NV + A+ + DEVYAQ+TL P S  E+  +   +    P+   +   + FCKTLTASDT
Sbjct: 98  MNVELKAEPDNDEVYAQLTLLPESKPEENGSSEEMPASPPAALARPRVHSFCKTLTASDT 157

Query: 125 STHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 184
           STHGGFSV RR A++  P LD + QPP QEL+A+DLH VEW+FRHIFRGQP+RHLL +GW
Sbjct: 158 STHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSGW 217

Query: 185 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHA 244
           SVFVSAKRLVAGD+ +F+  +  +L +G+RRA+R    +PSSV+SS SMH+G+LA A HA
Sbjct: 218 SVFVSAKRLVAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSHSMHLGVLATAWHA 277

Query: 245 AATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTI 304
             T + FTV++ PR SP+EFV+P  +Y++++      +GMRF+M FE EE+  +R+ GTI
Sbjct: 278 VNTGTMFTVYYKPRTSPAEFVVPCDRYMESL-KRNYPIGMRFKMRFEGEEAPEQRFTGTI 336

Query: 305 TGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRP 364
            G  D D   W+ S WR +KV WDE+++  R  RVS W+IEP  +    P + PL + RP
Sbjct: 337 VGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVS---PPPINPLPVHRP 393

Query: 365 WHPSTSS 371
             P +++
Sbjct: 394 KRPRSNA 400



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 41/104 (39%), Positives = 64/104 (61%), Gaps = 2/104 (1%)

Query: 678 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           TR+  KV+K G ++GRS+D+++F+ Y EL  EL +MF   G+ +   +  W +V+ D E 
Sbjct: 715 TRSCKKVHKQGMALGRSVDLTKFNGYTELVAELDEMFDFNGELKGCSKE-WMVVYTDYEG 773

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSG 780
           D++L+GDDPW  F S V  I + + E+VQ+M    + S    SG
Sbjct: 774 DMMLVGDDPWNEFCSMVHKIFVYTREEVQRMNPGALNSRPEDSG 817


>gi|115488556|ref|NP_001066765.1| Os12g0479400 [Oryza sativa Japonica Group]
 gi|77555451|gb|ABA98247.1| Auxin response factor 2, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113649272|dbj|BAF29784.1| Os12g0479400 [Oryza sativa Japonica Group]
 gi|215695057|dbj|BAG90248.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 840

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 192/365 (52%), Positives = 247/365 (67%), Gaps = 14/365 (3%)

Query: 11  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 70
           ELW ACAGPLV++P VG RV Y PQGH EQV A+TN+  +       NLP ++ C++ NV
Sbjct: 32  ELWRACAGPLVTVPAVGERVFYLPQGHIEQVEASTNQVAEQQGAPLYNLPWKIPCKVMNV 91

Query: 71  TMHADVETDEVYAQMTLQPLSPEEQ--------KDTFVPIELGIPS---KQPTNYFCKTL 119
            + A+ +TDEVYAQ+TL P   +          KD     E+  P+   +   + FCKTL
Sbjct: 92  ELKAEPDTDEVYAQLTLLPEKQDGNGSGNGNVSKDKVEEEEVVPPAATERPRVHSFCKTL 151

Query: 120 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 179
           TASDTSTHGGFSV RR A++  P LD S  PP QEL+A+DLH VEW+FRHIFRGQP+RHL
Sbjct: 152 TASDTSTHGGFSVLRRHADECLPPLDMSQHPPTQELVAKDLHGVEWRFRHIFRGQPRRHL 211

Query: 180 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLA 239
           L +GWSVFVSAKRLVAGD+ +F+  E  +L +G+RRA+R    +PSSV+SS SMH+G+LA
Sbjct: 212 LQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQANIPSSVISSHSMHLGVLA 271

Query: 240 AAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRR 299
            A HA  T + FTV++ PR SPSEFV+P   Y K       S+GMRF+M FE EE++ +R
Sbjct: 272 TAWHAVNTGTMFTVYYKPRTSPSEFVVPRDLY-KESLKRNHSIGMRFKMTFEGEEAAEQR 330

Query: 300 YMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSLFP 358
           + GTI G+ D DP  W++S WRS+KV WDE+ +  R  RVS W+IEP  +  P+ P   P
Sbjct: 331 FTGTIVGVGDSDPSGWADSKWRSLKVRWDEAASVPRPDRVSPWQIEPANSPSPVNPLPAP 390

Query: 359 LRLKR 363
            R KR
Sbjct: 391 -RTKR 394



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 99/200 (49%), Gaps = 17/200 (8%)

Query: 613 VVFGVHIDSSG----LLLPTTVS----------SFTTSVDPGVSSMPLGDSGFHNSMYGC 658
           ++FG+ +DS      L+ P +V+                DP  +  PL D   H+S    
Sbjct: 633 MLFGISLDSPAKPELLISPPSVAFDGKLQQDALEEDECSDPSKTVKPL-DGAQHDSAREK 691

Query: 659 MQDSSELLHNVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEG 717
            Q   +   N+    Q   +R+  KV+K G ++GRS+D+++F+ Y+EL  EL QMF   G
Sbjct: 692 HQSCPDGTKNIQSKQQNGSSRSCKKVHKQGIALGRSIDLTKFTCYDELIAELDQMFDFNG 751

Query: 718 KFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSP 777
           +     ++ W +V+ D E D++L+GDDPW  F + V  I I + E+VQKM    + S S 
Sbjct: 752 ELNSSSKN-WMVVYTDNEGDMMLVGDDPWNEFCNMVHKIFIYTREEVQKMNPGALNSRSE 810

Query: 778 SSGQRANSRGNCGRDPVGSL 797
            S   +  RG  G    G L
Sbjct: 811 DSRSTSVERGLVGEGLQGGL 830


>gi|413920952|gb|AFW60884.1| auxin response factor [Zea mays]
          Length = 817

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 185/372 (49%), Positives = 258/372 (69%), Gaps = 8/372 (2%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G    + +ELW+ CAGPLV++P VG +V YFPQGH EQV A+TN+  + H+  Y +LP +
Sbjct: 67  GTEDGMYTELWNLCAGPLVTVPRVGDKVYYFPQGHIEQVEASTNQVAEQHMQFY-DLPWK 125

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPS---KQPTNYFCKTL 119
           ++C++ NV + A+ + DEVYAQ+TL P S  E+  +   +    P+   +   + FCKTL
Sbjct: 126 ILCEVMNVELKAEPDNDEVYAQLTLLPESKPEENGSSEEMPASPPAALARPRVHSFCKTL 185

Query: 120 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 179
           TASDTSTHGGFSV RR A++  P LD + QPP QEL+A+DLH VEW+FRHIFRGQP+RHL
Sbjct: 186 TASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHL 245

Query: 180 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLA 239
           L +GWSVFVSAKRLVAGD+ +F+  +  +L +G+RRA+R    +PSSV+SS SMH+G+LA
Sbjct: 246 LQSGWSVFVSAKRLVAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSHSMHLGVLA 305

Query: 240 AAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRR 299
            A HA  T + FTV++ PR SP+EFV+P  +Y++++      +GMRF+M FE EE+  +R
Sbjct: 306 TAWHAVNTGTMFTVYYKPRTSPAEFVVPCDRYMESL-KRNYPIGMRFKMRFEGEEAPEQR 364

Query: 300 YMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL 359
           + GTI G  D D   W+ S WR +KV WDE+++  R  RVS W+IEP  +    P + PL
Sbjct: 365 FTGTIVGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVS---PPPINPL 421

Query: 360 RLKRPWHPSTSS 371
            + RP  P +++
Sbjct: 422 PVHRPKRPRSNA 433



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 30/71 (42%), Positives = 49/71 (69%), Gaps = 2/71 (2%)

Query: 678 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           TR+  KV+K G ++GRS+D+++F+ Y EL  EL +MF   G+ +   +  W +V+ D E 
Sbjct: 748 TRSCKKVHKQGMALGRSVDLTKFNGYTELVAELDEMFDFNGELKGCSKE-WMVVYTDYEG 806

Query: 737 DVLLLGDDPWE 747
           D++L+GDDPW+
Sbjct: 807 DMMLVGDDPWK 817


>gi|22136676|gb|AAM91657.1| auxin response factor 1 [Arabidopsis thaliana]
          Length = 662

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 191/364 (52%), Positives = 252/364 (69%), Gaps = 7/364 (1%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
            L  ELWHACAGPLV+LP  G RV YFP+GH EQ+ A+ ++ ++  +P++ NLP +++C+
Sbjct: 18  ALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSF-NLPSKILCK 76

Query: 67  LHNVTMHADVETDEVYAQMTLQP-LSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTS 125
           + N+   A+ ETDEVYAQ+TL P L   E      P++   P K   + FCKTLTASDTS
Sbjct: 77  VINIQRRAEPETDEVYAQITLLPELDQSEPTSPDAPVQE--PEKCTVHSFCKTLTASDTS 134

Query: 126 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 185
           T GGFSV RR A+   P LD S QPP QEL+A DLH+ EW FRHIFRGQP+RHLLTTGWS
Sbjct: 135 TQGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWS 194

Query: 186 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 245
           VFVS+K+LVAGD+ +F+  E  +L +G+RR +R  T +PSSV+SS SMHIG+LA AAHA 
Sbjct: 195 VFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMHIGVLATAAHAI 254

Query: 246 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 305
            T + F+VF+ PR S SEF++ + +Y++A    ++SVGMRF+M FE EE+  +R+ GTI 
Sbjct: 255 TTGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQ-KLSVGMRFKMRFEGEEAPEKRFSGTIV 313

Query: 306 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT--TFPMYPSLFPLRLKR 363
           G+ +     W +S WRS+KV WDE ++  R  RVS WE+EPL   + P      P R KR
Sbjct: 314 GVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQPPQRNKR 373

Query: 364 PWHP 367
           P  P
Sbjct: 374 PRPP 377



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 61/90 (67%), Gaps = 2/90 (2%)

Query: 679 RTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 737
           R+  KV+  GS VGR++D++R   Y +L ++L +MF I+G+  +  +  WQ+V+ D E+D
Sbjct: 539 RSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLESTKK-WQVVYTDDEDD 597

Query: 738 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           ++++GDDPW  F   V  I I +PE+V+K+
Sbjct: 598 MMMVGDDPWNEFCGMVRKIFIYTPEEVKKL 627


>gi|269986107|gb|ACX68650.3| auxin response factor [Dimocarpus longan]
          Length = 681

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 194/364 (53%), Positives = 250/364 (68%), Gaps = 6/364 (1%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
            L  ELWHACAGPLVSLP  G RV YFPQGH EQ+ A+ ++ ++  +P++ NLP +++C+
Sbjct: 26  ALYRELWHACAGPLVSLPREGERVYYFPQGHMEQLEASMHQGLEQQMPSF-NLPSKILCK 84

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 126
           + NV   A+ ETDEVYAQ+TL P  P+  + T        P K   + FCKTLTASDTST
Sbjct: 85  VVNVQRRAEPETDEVYAQITLLP-EPDPNEVTSPDPPPPEPEKCTVHSFCKTLTASDTST 143

Query: 127 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 186
           HGGFSV RR A+   P LD S QPP QEL+A DLH  EW FRHIFRGQP+RHLLTTGWSV
Sbjct: 144 HGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNEWHFRHIFRGQPRRHLLTTGWSV 203

Query: 187 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 246
           FVS+K+LVAGD+ +F+  E  +L +G+RR +R  T MPSSV+SS SMH+G+LA A+HA A
Sbjct: 204 FVSSKKLVAGDAFIFLRGETGELRVGVRRHMRQQTNMPSSVISSHSMHLGVLATASHAIA 263

Query: 247 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 306
           T + F++F+ PR S SEF++ + KY++A  H ++SVGMRF+M FE EE     + G I G
Sbjct: 264 TGTLFSIFYKPRTSRSEFIVSVNKYLEARKH-KLSVGMRFKMRFEGEEVPDEGFSGIIVG 322

Query: 307 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL---TTFPMYPSLFPLRLKR 363
           + D     W NS WRS+KV WDE ++  R  RVS WE+EPL   TT P  P+  P +  +
Sbjct: 323 VEDNKTSAWPNSEWRSLKVQWDEPSSILRPDRVSSWELEPLVANTTTPPPPNSQPAQRNK 382

Query: 364 PWHP 367
              P
Sbjct: 383 RARP 386



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 35/90 (38%), Positives = 60/90 (66%), Gaps = 2/90 (2%)

Query: 679 RTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 737
           R+  KV+  G +VGR++D++RF  Y++L + L +MF I G+     +  WQ+V+ D E+D
Sbjct: 557 RSCTKVHMQGIAVGRAVDLTRFDRYDDLLKRLEEMFDIGGELSGATKK-WQVVYTDDEDD 615

Query: 738 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           ++++GDDPW  F S V  I I + E+V+++
Sbjct: 616 MMMVGDDPWHEFCSMVRKIFIYTAEEVKRL 645


>gi|413920954|gb|AFW60886.1| auxin response factor [Zea mays]
          Length = 751

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 184/367 (50%), Positives = 257/367 (70%), Gaps = 8/367 (2%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           + +ELW+ CAGPLV++P VG +V YFPQGH EQV A+TN+  + H+  Y +LP +++C++
Sbjct: 39  MYTELWNLCAGPLVTVPRVGDKVYYFPQGHIEQVEASTNQVAEQHMQFY-DLPWKILCEV 97

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPS---KQPTNYFCKTLTASDT 124
            NV + A+ + DEVYAQ+TL P S  E+  +   +    P+   +   + FCKTLTASDT
Sbjct: 98  MNVELKAEPDNDEVYAQLTLLPESKPEENGSSEEMPASPPAALARPRVHSFCKTLTASDT 157

Query: 125 STHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 184
           STHGGFSV RR A++  P LD + QPP QEL+A+DLH VEW+FRHIFRGQP+RHLL +GW
Sbjct: 158 STHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSGW 217

Query: 185 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHA 244
           SVFVSAKRLVAGD+ +F+  +  +L +G+RRA+R    +PSSV+SS SMH+G+LA A HA
Sbjct: 218 SVFVSAKRLVAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSHSMHLGVLATAWHA 277

Query: 245 AATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTI 304
             T + FTV++ PR SP+EFV+P  +Y++++      +GMRF+M FE EE+  +R+ GTI
Sbjct: 278 VNTGTMFTVYYKPRTSPAEFVVPCDRYMESL-KRNYPIGMRFKMRFEGEEAPEQRFTGTI 336

Query: 305 TGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRP 364
            G  D D   W+ S WR +KV WDE+++  R  RVS W+IEP  +    P + PL + RP
Sbjct: 337 VGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVS---PPPINPLPVHRP 393

Query: 365 WHPSTSS 371
             P +++
Sbjct: 394 KRPRSNA 400


>gi|168004026|ref|XP_001754713.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162694334|gb|EDQ80683.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 398

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 196/364 (53%), Positives = 246/364 (67%), Gaps = 18/364 (4%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           L+ ELWHACAGPL  LP V + V+Y+PQGH EQV A    +V      + NLP  L+C++
Sbjct: 4   LDCELWHACAGPLTQLPPVDSHVMYWPQGHIEQVCAA---DVYQASKQFSNLPAHLLCKI 60

Query: 68  HNVTMHADVETDEVYAQMTLQPLSP----EEQKDTFVPIELGIPSKQPTNYFCKTLTASD 123
             + + AD  TDEV+AQM L P       +E KD   P       ++    FCKTLTASD
Sbjct: 61  SKIELQADPHTDEVFAQMDLTPQYETEFTKEMKDAPPPT-----MQKNVRSFCKTLTASD 115

Query: 124 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 183
           TSTHGGFSVPRRAAE   P LD S+ PP QEL+A+DLH  EW FRHI+RG P+RHLLTTG
Sbjct: 116 TSTHGGFSVPRRAAEDCLPLLDHSMNPPCQELVAKDLHGKEWNFRHIYRGHPRRHLLTTG 175

Query: 184 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAH 243
           WSVFVS KRLVAGD+V+F+  E  QL +G+RRA +      S+  S+ ++H+G+LAAA+H
Sbjct: 176 WSVFVSQKRLVAGDTVIFLRGENGQLRVGVRRASKQLPQTRSTHFSNANLHLGVLAAASH 235

Query: 244 AAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGT 303
           AA     F+V +NPR SPSEFVIP  KY+K      ++VG RF+M FE++ES+ RRY GT
Sbjct: 236 AATERLRFSVIYNPRTSPSEFVIPYHKYLKTK-ENNLTVGSRFKMKFESDESTERRYSGT 294

Query: 304 ITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE---PLTTFPMYPSLFPLR 360
           I  +SD DP++W NS WRS+KV WDES A ER  RVS WEIE   P++T P  PS+ P  
Sbjct: 295 IVEVSDADPLKWPNSAWRSMKVEWDES-ASERHERVSPWEIEPFVPISTLPT-PSVGPRP 352

Query: 361 LKRP 364
            +RP
Sbjct: 353 KRRP 356


>gi|295844300|gb|ADG43147.1| auxin response factor 13 [Zea mays]
 gi|413920956|gb|AFW60888.1| auxin response factor [Zea mays]
          Length = 850

 Score =  374 bits (961), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 188/371 (50%), Positives = 257/371 (69%), Gaps = 15/371 (4%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           + +ELW+ CAGPLV++P VG +V YFPQGH EQV A+TN+  + H+  Y +LP +++C++
Sbjct: 39  MYTELWNLCAGPLVTVPRVGDKVYYFPQGHIEQVEASTNQVAEQHMQFY-DLPWKILCEV 97

Query: 68  HNVTMHADVETDEVYAQMTLQPLS--PEEQKDT-----FVPIELGIPSKQPTNYFCKTLT 120
            NV + A+ + DEVYAQ+TL P S  PEE   +       P  L  P     + FCKTLT
Sbjct: 98  MNVELKAEPDNDEVYAQLTLLPESKQPEENGSSEEMPASPPAALARPR---VHSFCKTLT 154

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
           ASDTSTHGGFSV RR A++  P LD + QPP QEL+A+DLH VEW+FRHIFRGQP+RHLL
Sbjct: 155 ASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLL 214

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 240
            +GWSVFVSAKRLVAGD+ +F+  +  +L +G+RRA+R    +PSSV+SS SMH+G+LA 
Sbjct: 215 QSGWSVFVSAKRLVAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSHSMHLGVLAT 274

Query: 241 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 300
           A HA  T + FTV++ PR SP+EFV+P  +Y++++      +GMRF+M FE EE+  +R+
Sbjct: 275 AWHAVNTGTMFTVYYKPRTSPAEFVVPCDRYMESL-KRNYPIGMRFKMRFEGEEAPEQRF 333

Query: 301 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLR 360
            GTI G  D D   W+ S WR +KV WDE+++  R  RVS W+IEP  +    P + PL 
Sbjct: 334 TGTIVGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVS---PPPINPLP 390

Query: 361 LKRPWHPSTSS 371
           + RP  P +++
Sbjct: 391 VHRPKRPRSNA 401



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 41/104 (39%), Positives = 64/104 (61%), Gaps = 2/104 (1%)

Query: 678 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           TR+  KV+K G ++GRS+D+++F+ Y EL  EL +MF   G+ +   +  W +V+ D E 
Sbjct: 716 TRSCKKVHKQGMALGRSVDLTKFNGYTELVAELDEMFDFNGELKGCSKE-WMVVYTDYEG 774

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSG 780
           D++L+GDDPW  F S V  I + + E+VQ+M    + S    SG
Sbjct: 775 DMMLVGDDPWNEFCSMVHKIFVYTREEVQRMNPGALNSRPEDSG 818


>gi|357167643|ref|XP_003581263.1| PREDICTED: auxin response factor 9-like [Brachypodium distachyon]
          Length = 693

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 190/363 (52%), Positives = 255/363 (70%), Gaps = 15/363 (4%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           L  ELWHACAGPL+++P  G RV YFPQGH EQ+ A+TN+++D ++P + NLP +++C +
Sbjct: 71  LFHELWHACAGPLITVPRQGERVYYFPQGHIEQLEASTNQQLDQYLPMF-NLPSKILCSV 129

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVP---IELGIPSKQPTNYFCKTLTASDT 124
            NV +  + ++DEVYAQ+ LQP   + +  +  P   +E G       + FCKTLTASDT
Sbjct: 130 VNVELRTEADSDEVYAQIMLQPQDEQSELTSAGPPQELERGT-----IHSFCKTLTASDT 184

Query: 125 STHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 184
           STHGGFSV RR AE+  P LD S  PP QEL+A+DLH  EW FRHIFRGQP+RHLLTTGW
Sbjct: 185 STHGGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGAEWHFRHIFRGQPRRHLLTTGW 244

Query: 185 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHA 244
           SVFVS+KRLVAGD+ +F+     +L +G+RR +R    MPSSV+SS SMH+G+LA A+HA
Sbjct: 245 SVFVSSKRLVAGDAFIFLRGGNGELRVGVRRHMRQVNNMPSSVISSHSMHLGVLATASHA 304

Query: 245 AATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTI 304
            +T + F+VF+ PR S SEFV+ + KY++A     +SVGMRF+M FE +E+  RR+ GTI
Sbjct: 305 ISTGTLFSVFYKPRTSRSEFVVSVNKYLEAK-KQNMSVGMRFKMKFEGDEALERRFSGTI 363

Query: 305 TGISD---LDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL-TTFPMYPSLFPLR 360
            G+     +   +W++S W+S+KV WDE ++  R  RVSLWE+EPL +  P  P   PLR
Sbjct: 364 VGMGSTPTMPSSQWADSDWKSLKVQWDEPSSILRPDRVSLWELEPLDSANPQTPEP-PLR 422

Query: 361 LKR 363
            KR
Sbjct: 423 NKR 425



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 58/95 (61%), Gaps = 2/95 (2%)

Query: 678 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
            R+  KV   G +VGR++D++R   Y +L  +L +MF I G+    L+  WQ+V+ D E+
Sbjct: 582 VRSCTKVIMKGMAVGRAVDLARLDGYGDLHRKLEEMFDIHGELCSTLKR-WQVVYADDED 640

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 771
           D++L+GDDPW+ F   V  I I S E+ +++  + 
Sbjct: 641 DMMLVGDDPWDEFCGMVKRIYIYSYEEAKQLAPKA 675


>gi|259027688|gb|ACV91105.1| putative ARF4 protein [Petunia x hybrida]
          Length = 808

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 194/379 (51%), Positives = 248/379 (65%), Gaps = 20/379 (5%)

Query: 11  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTN-KEVDSHIPNYPNLPPQLICQLHN 69
           ELW+ACAGPL  LP  G  VVYFPQGH E+ A+++    +   +P +  L PQ+ C++ +
Sbjct: 61  ELWYACAGPLTCLPKKGNVVVYFPQGHMEEAASSSPFSPMKMDLPTF-GLHPQIFCRVDD 119

Query: 70  VTMHADVETDEVYAQMTLQPLSPE---------EQKDTFVPIEL-GI-PSKQPTNYFCKT 118
           V + A+ E DEVY Q++L PL PE         E +D  +  E  G+ P K  ++ FCKT
Sbjct: 120 VQLLANKENDEVYTQLSLLPL-PESVAISLEGKEHEDFGIDEERNGVNPGKSASHMFCKT 178

Query: 119 LTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRH 178
           LTASDTSTHGGFSVPRRAAE  FP LD+  Q P+QELIA+DLH VEWKFRHI+RGQP+RH
Sbjct: 179 LTASDTSTHGGFSVPRRAAEDCFPPLDYKEQRPSQELIAKDLHGVEWKFRHIYRGQPRRH 238

Query: 179 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLL 238
           LLTTGWS+FVS K LV+GD+VLF+  E   L LGIRRA RP   +P S++ S      +L
Sbjct: 239 LLTTGWSIFVSQKNLVSGDAVLFLRGEGGDLRLGIRRAARPRNALPESIIKSQYSGSDVL 298

Query: 239 AAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVR 298
           +A A A +T S F VF++PRAS ++FV+P  KYVK++  TR+ VG RF+M F+ ++S  R
Sbjct: 299 SAVASAVSTKSAFNVFYSPRASHADFVVPYQKYVKSI-KTRIPVGTRFKMRFDLDDSPER 357

Query: 299 RYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP-----MY 353
           RY G +TGISD+DP RW NS WR + V WDE      Q RVS WEI+   + P       
Sbjct: 358 RYSGVVTGISDMDPFRWPNSKWRCLMVRWDEDIMNNHQERVSPWEIDSSVSLPPLSIQSS 417

Query: 354 PSLFPLRLKRPWHPSTSSF 372
           P L  LR  +   P  S F
Sbjct: 418 PRLKKLRTSQQAQPVDSHF 436



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 64/111 (57%), Gaps = 2/111 (1%)

Query: 674 QLTPTRTFVKVYKS-GSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFV 732
           Q +  R+  KV+K  G +GR  D+S  + + +L  EL ++  IE    DP + GW++++ 
Sbjct: 675 QSSGKRSCTKVHKQRGLIGRPFDLSGLNGHADLLVELERLLNIEDLLSDP-KKGWRILYT 733

Query: 733 DRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRA 783
           D +ND++++G DPW  F   V  I I + E+V+KM  +G+   + S  + A
Sbjct: 734 DSDNDLMVVGGDPWHEFCEVVSKIHIYTQEEVEKMTIEGISDDTQSCLEEA 784


>gi|356520147|ref|XP_003528726.1| PREDICTED: auxin response factor 1-like [Glycine max]
          Length = 674

 Score =  371 bits (952), Expect = e-99,   Method: Compositional matrix adjust.
 Identities = 190/361 (52%), Positives = 251/361 (69%), Gaps = 6/361 (1%)

Query: 5   NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLI 64
           N  L  ELWHACAGPLV+LP  G RV YFPQGH EQ+ A+  + ++  +P++ NLP +++
Sbjct: 16  NDDLYKELWHACAGPLVTLPREGERVYYFPQGHMEQLEASMYEGLEQQMPSF-NLPSKIL 74

Query: 65  CQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIE-LGIPSKQPTNYFCKTLTASD 123
           C++ NV + A+ ETDEVYAQ+TL P +  +Q +   P + L    +   + FCKTLTASD
Sbjct: 75  CKVVNVHLRAEPETDEVYAQITLLPEA--DQSEVTSPDDPLPESPRVKIHSFCKTLTASD 132

Query: 124 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 183
           TSTHGGFSV RR A+   P LD S QPP QEL+A DLH  EW FRHIFRGQPKRHLLTTG
Sbjct: 133 TSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNEWHFRHIFRGQPKRHLLTTG 192

Query: 184 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAH 243
           WSVFVS+K+L AGD+ +F+  E  +L +G+RR +R  + +PSSV+SS SMH+G+LA A+H
Sbjct: 193 WSVFVSSKKLAAGDAFIFLRGENGELRVGVRRVMRQQSNVPSSVISSHSMHLGVLATASH 252

Query: 244 AAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGT 303
           A AT + F+VF+ PR S SEF++ + KY++   H ++SVGMRF+M FE +E   RR+ GT
Sbjct: 253 AIATGTLFSVFYKPRTSRSEFIVSVNKYLEVQSH-KLSVGMRFKMRFEGDEIPERRFSGT 311

Query: 304 ITGISDLDPVR-WSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 362
           I G+ D      W +S WRS+KV WDE ++  R  RVS WE+EPL +  +  S    R K
Sbjct: 312 IVGVGDNKSSSVWPDSEWRSLKVQWDEPSSILRPDRVSSWELEPLVSTTLANSQPTQRNK 371

Query: 363 R 363
           R
Sbjct: 372 R 372



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/98 (38%), Positives = 62/98 (63%), Gaps = 2/98 (2%)

Query: 671 QIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQL 729
           Q  Q    R+  KV+  G +VGR++D++RF  Y +L  +L  MF I+ +    L+  WQ+
Sbjct: 542 QESQSKQIRSCTKVHMQGMAVGRAVDLTRFDGYEDLLRKLEDMFNIKTELCGSLKK-WQV 600

Query: 730 VFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           V+ D E+D++++GDDPW+ F S V  I I + E+V+K+
Sbjct: 601 VYTDNEDDMMMVGDDPWDEFCSVVRKIFIYTAEEVKKL 638


>gi|297745485|emb|CBI40565.3| unnamed protein product [Vitis vinifera]
          Length = 607

 Score =  370 bits (951), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 193/392 (49%), Positives = 261/392 (66%), Gaps = 8/392 (2%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           L +ELW ACAGPLV +P    RV YFPQGH EQ+ A+TN+ VD  IP + NLP +++C++
Sbjct: 20  LFTELWRACAGPLVDVPKPHERVFYFPQGHMEQLQASTNQGVDQRIPLF-NLPSKILCRV 78

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTH 127
            +  + A+ ETDEVYAQ+TLQP + + +  +        P KQ  + FCK LTASDTSTH
Sbjct: 79  VHTRLLAEQETDEVYAQITLQPEADQTEPKSPDSCPDEAP-KQTVHSFCKILTASDTSTH 137

Query: 128 GGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 187
           GGFSV R+ A +  P LD S   P QEL+ARDLH  EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 138 GGFSVLRKHANECLPPLDMSQATPTQELVARDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 197

Query: 188 VSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAAT 247
           V++KRLVAGD+ +F+  +  +L +G+RR  R  + MPSSV+SS SMH+G+LA A+HA  T
Sbjct: 198 VTSKRLVAGDAFVFLRGDNGELRVGVRRLARQQSPMPSSVISSQSMHLGVLATASHAVTT 257

Query: 248 NSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGI 307
            + F V++ PR   S+F+I L KY++AV +   +VGMRF+M FE E+S  RR+ GTI GI
Sbjct: 258 QTLFVVYYKPRT--SQFIISLNKYLEAVNYG-FAVGMRFKMRFEGEDSPERRFTGTIVGI 314

Query: 308 SDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYPSLFPLRLKRPWH 366
            D+ P +WSNS WRS+K+ WDE    +R  RVS W+IEP + +  +  +  P+++KRP  
Sbjct: 315 GDISP-QWSNSKWRSLKIQWDEPATIQRPERVSSWDIEPFVASASLNLTQPPVKIKRP-R 372

Query: 367 PSTSSFNDNRDETASGLNWLRGGTGEQGLTTL 398
           P      +N   +     W  G +    LT L
Sbjct: 373 PLDLPVAENTSSSVPSPFWYAGSSPSHELTQL 404



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 38/90 (42%), Positives = 57/90 (63%), Gaps = 2/90 (2%)

Query: 678 TRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 737
           TRT     +  +VGR++D++    Y+EL  EL +MF I+G+     R+ W++VF D E D
Sbjct: 492 TRTKKVQMQGVAVGRAVDLTALEGYDELISELEKMFEIKGELCP--RNKWEVVFTDDEGD 549

Query: 738 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           ++L+GDDPW+ F   V  I I S E+V+KM
Sbjct: 550 MMLVGDDPWQEFCKMVRKIFIYSSEEVKKM 579


>gi|359489584|ref|XP_002264072.2| PREDICTED: auxin response factor 18-like [Vitis vinifera]
          Length = 764

 Score =  370 bits (951), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 192/395 (48%), Positives = 264/395 (66%), Gaps = 8/395 (2%)

Query: 5   NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLI 64
           ++ ++S+LW ACAGPLV +P    RV YFPQGH EQ+ A+TN+ VD  IP + NLP +++
Sbjct: 80  SEAVSSQLWRACAGPLVDVPKPHERVFYFPQGHMEQLQASTNQGVDQRIPLF-NLPSKIL 138

Query: 65  CQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDT 124
           C++ +  + A+ ETDEVYAQ+TLQP + + +  +        P KQ  + FCK LTASDT
Sbjct: 139 CRVVHTRLLAEQETDEVYAQITLQPEADQTEPKSPDSCPDEAP-KQTVHSFCKILTASDT 197

Query: 125 STHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 184
           STHGGFSV R+ A +  P LD S   P QEL+ARDLH  EW+F+HIFRGQP+RHLLTTGW
Sbjct: 198 STHGGFSVLRKHANECLPPLDMSQATPTQELVARDLHGYEWRFKHIFRGQPRRHLLTTGW 257

Query: 185 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHA 244
           S FV++KRLVAGD+ +F+  +  +L +G+RR  R  + MPSSV+SS SMH+G+LA A+HA
Sbjct: 258 STFVTSKRLVAGDAFVFLRGDNGELRVGVRRLARQQSPMPSSVISSQSMHLGVLATASHA 317

Query: 245 AATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTI 304
             T + F V++ PR   S+F+I L KY++AV +   +VGMRF+M FE E+S  RR+ GTI
Sbjct: 318 VTTQTLFVVYYKPRT--SQFIISLNKYLEAVNYG-FAVGMRFKMRFEGEDSPERRFTGTI 374

Query: 305 TGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYPSLFPLRLKR 363
            GI D+ P +WSNS WRS+K+ WDE    +R  RVS W+IEP + +  +  +  P+++KR
Sbjct: 375 VGIGDISP-QWSNSKWRSLKIQWDEPATIQRPERVSSWDIEPFVASASLNLTQPPVKIKR 433

Query: 364 PWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTL 398
           P  P      +N   +     W  G +    LT L
Sbjct: 434 P-RPLDLPVAENTSSSVPSPFWYAGSSPSHELTQL 467



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 64/105 (60%), Gaps = 3/105 (2%)

Query: 678 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           +RT  KV   G +VGR++D++    Y+EL  EL +MF I+G+     R+ W++VF D E 
Sbjct: 648 SRTRTKVQMQGVAVGRAVDLTALEGYDELISELEKMFEIKGELCP--RNKWEVVFTDDEG 705

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQ 781
           D++L+GDDPW+ F   V  I I S E+V+KM  +   S S   G+
Sbjct: 706 DMMLVGDDPWQEFCKMVRKIFIYSSEEVKKMSPRCKLSTSSLDGE 750


>gi|224028299|gb|ACN33225.1| unknown [Zea mays]
          Length = 832

 Score =  370 bits (951), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 185/371 (49%), Positives = 250/371 (67%), Gaps = 11/371 (2%)

Query: 2   IGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 61
            G    L  ELW ACAGPL  +P +G +V Y PQGH EQV A+TN+  +       NLP 
Sbjct: 17  CGGKDALFVELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPW 76

Query: 62  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFV--------PIELGIPSKQP-T 112
           ++ C+L N+ +  + +TDEVYAQ+TL P   +++  +          P  L   ++ P  
Sbjct: 77  KIPCKLMNIELKVEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHI 136

Query: 113 NYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFR 172
           + FCKTLTASDTSTHGGFSV RR A++  P LD S  PP QEL+A+DLH  EW+FRHIFR
Sbjct: 137 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFR 196

Query: 173 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDS 232
           GQP+RHLL +GWSVFVSAKRLVAGD+ +F+  E  +L +G+RRA+R  T +PSSV+SS +
Sbjct: 197 GQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHN 256

Query: 233 MHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFET 292
           MH+G+LA A HA  T+S FTV++ PR SP+EFV+   +Y +++     S+GMRF+M FE 
Sbjct: 257 MHLGVLATAWHAVNTDSMFTVYYKPRTSPAEFVVSRDRYYESL-KRNYSIGMRFKMRFEG 315

Query: 293 EESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPM 352
           EE++ +R+ GTI GI   DP  W++S WRS+KV WDE ++  R  RVS W+IEP +  P 
Sbjct: 316 EEAAEQRFTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEP-SVSPC 374

Query: 353 YPSLFPLRLKR 363
           + +  P+R KR
Sbjct: 375 HVNPLPVRFKR 385



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 55/137 (40%), Positives = 81/137 (59%), Gaps = 2/137 (1%)

Query: 660 QDSSELLHNVGQIDQLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGK 718
           Q S E   N+    Q + TR+  KV+K GS +GRS+D+++F+ Y+EL  EL QMF  +G+
Sbjct: 685 QPSPEATLNIQNKVQSSSTRSCKKVHKQGSALGRSIDLTKFACYDELIAELDQMFDFDGE 744

Query: 719 FEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPS 778
            + P +S W +V+ D E D++L+GDDPW  F   V  I I + E+V++M    + S S  
Sbjct: 745 LKSPCKS-WLVVYTDNEGDIMLVGDDPWNEFCDMVHKIFIYTREEVERMNPGALNSRSED 803

Query: 779 SGQRANSRGNCGRDPVG 795
           S   +  RG   RDP G
Sbjct: 804 SLSDSLGRGVASRDPRG 820


>gi|255570833|ref|XP_002526369.1| Auxin response factor, putative [Ricinus communis]
 gi|223534328|gb|EEF36040.1| Auxin response factor, putative [Ricinus communis]
          Length = 810

 Score =  370 bits (950), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 184/351 (52%), Positives = 241/351 (68%), Gaps = 13/351 (3%)

Query: 11  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 70
           ELWHACAGPL SLP  G  VVYFPQGH EQVA ++       +P + +L PQ+ C++ NV
Sbjct: 47  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVAPSSPFS-PMEMPTF-DLQPQIFCKVVNV 104

Query: 71  TMHADVETDEVYAQMTLQP--------LSPEEQKDTFVPIELG--IPSKQPTNYFCKTLT 120
            + A+ E DEVY Q+ L P        L  +E ++  V  E G  +P+K   + FCKTLT
Sbjct: 105 QLLANKENDEVYTQLALLPQPELVGPNLEVKELEELGVDEEGGGGLPAKSTPHMFCKTLT 164

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
           ASDTSTHGGFSVPRRAAE  FP LD+  Q P+QEL+A+DLH VEW+FRHI+RGQP+RHLL
Sbjct: 165 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 224

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 240
           TTGWS+FVS K LV+GD+VLF+  E  +L LGIRRA+RP   +P SV+   + +  +L+ 
Sbjct: 225 TTGWSIFVSQKNLVSGDAVLFLRGEDGELRLGIRRAVRPRNGLPDSVIGKQNSYPSVLSV 284

Query: 241 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 300
            A+A +T S F V ++PRAS ++FV+P  KY+K++ +  V +G RF+M FE ++S  RR 
Sbjct: 285 VANAISTKSMFNVLYSPRASHADFVVPYKKYMKSIMNP-VCIGTRFKMRFEMDDSPERRC 343

Query: 301 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 351
            G +TGISDL+P RW NS WR + V WDE    + Q RVS WEI+P  + P
Sbjct: 344 SGVVTGISDLNPYRWPNSKWRCLMVRWDEDIGNDHQERVSPWEIDPSVSLP 394



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 65/188 (34%), Positives = 101/188 (53%), Gaps = 19/188 (10%)

Query: 595 GKDAAVGTENCNTDSQN------SVVFGVHIDSSGLLLPTTVSSFTTSVDPGVSSMPLG- 647
           G+DA + +   N   +N      S+  GV  D  G   P  +S   T  +PG +S  LG 
Sbjct: 571 GQDARMRSYATNFPRENFQFGAPSIQAGVSRDEVGK--PNQLSDLKTQ-EPGSASPALGV 627

Query: 648 ------DSGFHNSMYGC-MQDSSELLHNVGQIDQLTPTRTFVKVYKSGS-VGRSLDISRF 699
                 D+ F  +  GC +   S    +     Q +  R+  KV+K GS VGR++D+SR 
Sbjct: 628 NLRSQKDNSFGGTSSGCKLFGFSLTAESPNPNSQNSGKRSCTKVHKQGSLVGRAIDLSRL 687

Query: 700 SSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKIL 759
           + Y++L  EL ++F +EG  +DP   GW++++ D ENDV+++GDDPW  F + V  I I 
Sbjct: 688 NGYSDLLSELERLFSMEGLLQDP-NKGWRILYTDSENDVMVVGDDPWHEFCNVVSKIHIY 746

Query: 760 SPEDVQKM 767
           + E+V+KM
Sbjct: 747 TQEEVEKM 754


>gi|224029659|gb|ACN33905.1| unknown [Zea mays]
          Length = 830

 Score =  370 bits (950), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 185/371 (49%), Positives = 250/371 (67%), Gaps = 11/371 (2%)

Query: 2   IGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 61
            G    L  ELW ACAGPL  +P +G +V Y PQGH EQV A+TN+  +       NLP 
Sbjct: 15  CGGKDALFVELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPW 74

Query: 62  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFV--------PIELGIPSKQP-T 112
           ++ C+L N+ +  + +TDEVYAQ+TL P   +++  +          P  L   ++ P  
Sbjct: 75  KIPCKLMNIELKVEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHI 134

Query: 113 NYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFR 172
           + FCKTLTASDTSTHGGFSV RR A++  P LD S  PP QEL+A+DLH  EW+FRHIFR
Sbjct: 135 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFR 194

Query: 173 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDS 232
           GQP+RHLL +GWSVFVSAKRLVAGD+ +F+  E  +L +G+RRA+R  T +PSSV+SS +
Sbjct: 195 GQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHN 254

Query: 233 MHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFET 292
           MH+G+LA A HA  T+S FTV++ PR SP+EFV+   +Y +++     S+GMRF+M FE 
Sbjct: 255 MHLGVLATAWHAVNTDSMFTVYYKPRTSPAEFVVSRDRYYESL-KRNYSIGMRFKMRFEG 313

Query: 293 EESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPM 352
           EE++ +R+ GTI GI   DP  W++S WRS+KV WDE ++  R  RVS W+IEP +  P 
Sbjct: 314 EEAAEQRFTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEP-SVSPC 372

Query: 353 YPSLFPLRLKR 363
           + +  P+R KR
Sbjct: 373 HVNPLPVRFKR 383



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 55/137 (40%), Positives = 81/137 (59%), Gaps = 2/137 (1%)

Query: 660 QDSSELLHNVGQIDQLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGK 718
           Q S E   N+    Q + TR+  KV+K GS +GRS+D+++F+ Y+EL  EL QMF  +G+
Sbjct: 683 QPSPEATLNIQNKVQSSSTRSCKKVHKQGSALGRSIDLTKFACYDELIAELDQMFDFDGE 742

Query: 719 FEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPS 778
            + P +S W +V+ D E D++L+GDDPW  F   V  I I + E+V++M    + S S  
Sbjct: 743 LKSPCKS-WLVVYTDNEGDIMLVGDDPWNEFCDMVHKIFIYTREEVERMNPGALNSRSED 801

Query: 779 SGQRANSRGNCGRDPVG 795
           S   +  RG   RDP G
Sbjct: 802 SLSDSLGRGVASRDPRG 818


>gi|326520141|dbj|BAK03995.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 826

 Score =  370 bits (950), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 190/364 (52%), Positives = 251/364 (68%), Gaps = 14/364 (3%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           L  ELWHACAGPLV++P VG  V YFPQGH EQV A+ N+   + +  Y +LP +L+C++
Sbjct: 22  LYDELWHACAGPLVTVPRVGDMVYYFPQGHIEQVEASMNQVAANQMRLY-DLPSKLLCRV 80

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELG-------IPSKQPTNYFCKTLT 120
            NV + A+ +TDEVYAQ+ L P  PE+ +      E         +P++     FCKTLT
Sbjct: 81  LNVELKAEADTDEVYAQVMLMP-EPEQSEAAATTTEKSSSATGGTMPARPAVRSFCKTLT 139

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
           ASDTSTHGGFSV RR A++  P LD +  PP QEL+A+DLH +EW+FRHIFRGQP+RHLL
Sbjct: 140 ASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMEWRFRHIFRGQPRRHLL 199

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 240
            +GWSVFVS+KRLVAGD+ +F+  E  +L +G+RRA+R  + + SSV+SS SMH+G+LA 
Sbjct: 200 QSGWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRAMRQLSNIASSVISSHSMHLGVLAT 259

Query: 241 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 300
           A HA  T + FTV++ PR S SEF+IP  KY ++V +   S+G RF+M FE EE+  +R+
Sbjct: 260 AWHAINTKTMFTVYYKPRTSRSEFIIPYDKYTESVKNI-YSIGTRFKMRFEGEEAPEQRF 318

Query: 301 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL- 359
            GTI G  +LD + W  S WRS+KV WDES+   R  RVS WEIEP ++ P+ P   PL 
Sbjct: 319 TGTIVGSDNLDQL-WPESSWRSLKVRWDESSTIPRPDRVSPWEIEPASSPPVNP--LPLS 375

Query: 360 RLKR 363
           R KR
Sbjct: 376 RAKR 379



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/137 (37%), Positives = 77/137 (56%), Gaps = 6/137 (4%)

Query: 635 TSVDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSG-SVGRS 693
           T   P VS    G +    ++  C Q S +    V        TR+  KV+K G ++GRS
Sbjct: 656 TDCSPEVSLSIAGTTDNEKNIQQCPQSSKD----VQSKSHGASTRSCTKVHKQGVALGRS 711

Query: 694 LDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNV 753
           +D+S+F  Y+EL  EL +MF  +G+     ++ WQ+V+ D E D++L+GDDPWE F S V
Sbjct: 712 VDLSKFVDYDELTAELDKMFDFDGELMSSNKN-WQIVYTDNEGDMMLVGDDPWEEFCSMV 770

Query: 754 WYIKILSPEDVQKMGEQ 770
             I I + E+VQKM  +
Sbjct: 771 RKICIYTKEEVQKMNSK 787


>gi|226501648|ref|NP_001152338.1| LOC100285977 [Zea mays]
 gi|195655287|gb|ACG47111.1| auxin response factor 1 [Zea mays]
          Length = 676

 Score =  370 bits (949), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 195/370 (52%), Positives = 258/370 (69%), Gaps = 9/370 (2%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
            L  ELWHACAGPLV++P  G  V YFPQGH EQ+ A+T++++D H+P + NLP +++C+
Sbjct: 16  ALFRELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQLDQHLPLF-NLPHKILCK 74

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 126
           + NV + A+ ++DEVYAQ+ LQP + E+ + T    E   P +   + FCKTLTASDTST
Sbjct: 75  VVNVELRAETDSDEVYAQIMLQPQT-EQSEPTSPDPEPPEPERCNIHSFCKTLTASDTST 133

Query: 127 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 186
           HG  SV RR AE+  P LD +  PP QEL+A+DLH  EW FRHIFRGQP+RHLLTTGWSV
Sbjct: 134 HG-LSVLRRHAEECLPQLDMTQNPPWQELVAKDLHGNEWHFRHIFRGQPRRHLLTTGWSV 192

Query: 187 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 246
           FVS+KRLVAGD+ +F+  E  +L +G+RR +R    MPSSV+SS SMH+G+LA A+HA +
Sbjct: 193 FVSSKRLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHSMHLGVLATASHAIS 252

Query: 247 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 306
           T + F+VF+ PR S SEFV+ + KY++A  H ++SVGMRF+M FE +ES  RR+ G I G
Sbjct: 253 TGTLFSVFYKPRTSRSEFVVSVNKYLEAKNH-KMSVGMRFKMRFEGDESPERRFSGIIIG 311

Query: 307 ISDLDPVR----WSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLK 362
           +  + P      W+NS WRS+KV WDE +A  R  RVS WE+EPL      P   PLR K
Sbjct: 312 MGCM-PANSTSPWANSEWRSLKVQWDEPSAILRPDRVSPWEVEPLNRTNPQPPQPPLRNK 370

Query: 363 RPWHPSTSSF 372
           R   P++ S 
Sbjct: 371 RARPPASPSI 380



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/160 (31%), Positives = 80/160 (50%), Gaps = 10/160 (6%)

Query: 614 VFGVHIDSSGLLLPTTVSSFTTSVDPGVSSMP-----LGDSGFHNSMYGCMQDSSELLHN 668
           +FG+ I SS +    TV+S      P   S+      L      N        SS+   N
Sbjct: 477 LFGIEIGSSAVSPVVTVASVGHDPPPPALSVDAESDQLSQPSHANKATDAPAASSDRSPN 536

Query: 669 VGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGW 727
             +  Q    R+  KV   G +VGR++D++R   Y++LR +L +MF I G+    L + W
Sbjct: 537 ETESRQ---ARSCTKVIMQGVAVGRAVDLTRLDGYDDLRRKLEEMFDIPGELSASL-NKW 592

Query: 728 QLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           ++++ D E+D++L+GDDPW  F   V  I I S E+ + +
Sbjct: 593 KVIYTDDEDDMMLVGDDPWSEFCRMVKRIYIYSYEEAKSL 632


>gi|359359022|gb|AEV40929.1| putative auxin response factor [Oryza punctata]
          Length = 973

 Score =  370 bits (949), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 193/355 (54%), Positives = 226/355 (63%), Gaps = 60/355 (16%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G  K +NSELWHACAGPLV LP  G+ V YFPQGHSEQVAATT K  +S IPNYPNLP Q
Sbjct: 31  GAKKVINSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTRKIPNSRIPNYPNLPSQ 90

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELG--IPSKQPTNYFCKTLT 120
           L+CQ+HN+T+HAD +TDEVYAQMTLQP++ E   D F    LG    SK PT YFCK LT
Sbjct: 91  LLCQVHNITLHADKDTDEVYAQMTLQPVNSE--TDVFPIPTLGAYTKSKHPTEYFCKNLT 148

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
           ASDTSTHGGFSVPRRAAEK+FP LD+S+QPP QELI RDLHD  W FRHI+RGQPKRHLL
Sbjct: 149 ASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLL 208

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 240
           TTGWS+FV AKRL AGDSVLFI    +  ++ + R  +   + PS         +G+   
Sbjct: 209 TTGWSLFVGAKRLKAGDSVLFIRTSPSPFVIPVARYNKATYMQPS---------VGMR-- 257

Query: 241 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 300
                     F + F                                   ETEESS RRY
Sbjct: 258 ----------FAMMF-----------------------------------ETEESSKRRY 272

Query: 301 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS 355
            GT+ GISD DP+RW NS WR+++V WDE   GER  RVS+W+IE      ++PS
Sbjct: 273 TGTVVGISDYDPMRWPNSKWRNLQVEWDEHGYGERPERVSIWDIETPENTLVFPS 327



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 53/91 (58%), Positives = 70/91 (76%)

Query: 677 PTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           P RT+ KV K GSVGRS+D++ F +Y+ELR  +  MFG++GK E P  S W+LV+VD EN
Sbjct: 795 PVRTYTKVQKQGSVGRSIDVTGFRNYHELRSAIACMFGLQGKLEHPGSSEWKLVYVDYEN 854

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           DVLL+GDDPWE F++ V  I+ILSP +VQ+M
Sbjct: 855 DVLLVGDDPWEEFINCVRCIRILSPSEVQQM 885


>gi|414877792|tpg|DAA54923.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
          Length = 707

 Score =  369 bits (948), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 185/371 (49%), Positives = 250/371 (67%), Gaps = 11/371 (2%)

Query: 2   IGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 61
            G    L  ELW ACAGPL  +P +G +V Y PQGH EQV A+TN+  +       NLP 
Sbjct: 15  CGGKDALFVELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPW 74

Query: 62  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFV--------PIELGIPSKQP-T 112
           ++ C+L N+ +  + +TDEVYAQ+TL P   +++  +          P  L   ++ P  
Sbjct: 75  KIPCKLMNIELKVEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHI 134

Query: 113 NYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFR 172
           + FCKTLTASDTSTHGGFSV RR A++  P LD S  PP QEL+A+DLH  EW+FRHIFR
Sbjct: 135 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFR 194

Query: 173 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDS 232
           GQP+RHLL +GWSVFVSAKRLVAGD+ +F+  E  +L +G+RRA+R  T +PSSV+SS +
Sbjct: 195 GQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHN 254

Query: 233 MHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFET 292
           MH+G+LA A HA  T+S FTV++ PR SP+EFV+   +Y +++     S+GMRF+M FE 
Sbjct: 255 MHLGVLATAWHAVNTDSMFTVYYKPRTSPAEFVVSRDRYYESL-KRNYSIGMRFKMRFEG 313

Query: 293 EESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPM 352
           EE++ +R+ GTI GI   DP  W++S WRS+KV WDE ++  R  RVS W+IEP +  P 
Sbjct: 314 EEAAEQRFTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEP-SVSPC 372

Query: 353 YPSLFPLRLKR 363
           + +  P+R KR
Sbjct: 373 HVNPLPVRFKR 383


>gi|449449170|ref|XP_004142338.1| PREDICTED: auxin response factor 1-like [Cucumis sativus]
          Length = 739

 Score =  369 bits (948), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 184/340 (54%), Positives = 245/340 (72%), Gaps = 3/340 (0%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           L  ELWHACAGPLV+LP    RV YFPQGH EQ+ A+ ++ ++  +P++ NLP +++C++
Sbjct: 84  LYRELWHACAGPLVTLPRQDERVYYFPQGHMEQLEASMHQGLEQQMPSF-NLPSKILCKV 142

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTH 127
            NV + A+ +TDEVYAQ+TL P S + +  +  P  L  P++   + FCKTLTASDTSTH
Sbjct: 143 VNVVLRAESDTDEVYAQITLLPESNQNEVTSPDP-PLPEPTRCNVHSFCKTLTASDTSTH 201

Query: 128 GGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 187
           GGFSV RR A+   P LD S QPP QEL+A DLH  +W FRHIFRGQP+RHLLTTGWSVF
Sbjct: 202 GGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNQWHFRHIFRGQPRRHLLTTGWSVF 261

Query: 188 VSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAAT 247
           VS+K+LVAGD+ +F+  E  +L +G+RR +R    MPSSV+SS SMH+G+LA A+HA +T
Sbjct: 262 VSSKKLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHSMHLGVLATASHAIST 321

Query: 248 NSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGI 307
            + F+VF+ PR S S F++ L KY++A  H ++SVGMRF+M FE EE   R + GTI G+
Sbjct: 322 GTLFSVFYKPRTSRSTFLVSLNKYLEAQNH-KLSVGMRFKMRFEGEEVPERSFSGTIVGL 380

Query: 308 SDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 347
            D     W+NS WRS+KV WDE ++  R  +VS WE+EPL
Sbjct: 381 GDNASPGWANSEWRSLKVQWDEPSSILRPDKVSAWELEPL 420



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 38/90 (42%), Positives = 63/90 (70%), Gaps = 2/90 (2%)

Query: 679 RTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 737
           R+  KV+  G +VGR++D++RF+ Y++L  +L +MF IEG+    L+  WQ+V+ D E+D
Sbjct: 614 RSCTKVHMQGIAVGRAVDLTRFNQYDDLLRKLEEMFDIEGELCGSLKK-WQVVYTDDEDD 672

Query: 738 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           ++L+GDDPW  F S V  I I + E+V+++
Sbjct: 673 MMLVGDDPWNEFCSMVRKIFIYTTEEVKRL 702


>gi|350537149|ref|NP_001233771.1| auxin response factor 4 [Solanum lycopersicum]
 gi|85069287|gb|ABC69715.1| auxin response factor 4 [Solanum lycopersicum]
          Length = 811

 Score =  368 bits (945), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 189/356 (53%), Positives = 241/356 (67%), Gaps = 15/356 (4%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQ-VAATTNKEVDSHIPNYPNLPPQLICQ 66
           +  ELWHACAGPL SLP  G  VVYFPQGH E+ V+A     V   +P +  L PQ+ C+
Sbjct: 59  IYKELWHACAGPLTSLPKKGNVVVYFPQGHMEEAVSAFPFSPVKIDLPTF-GLQPQIFCR 117

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPE---------EQKDTFVPIE-LGI-PSKQPTNYF 115
           + +V + A+ E DEVY Q+TL PL PE         E +D+    E  G+ P K  ++ F
Sbjct: 118 VEDVQLLANKENDEVYTQLTLLPL-PESMAISLEGKEHEDSGTDEEGNGVNPGKSASHMF 176

Query: 116 CKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQP 175
           CKTLTASDT+THGGFSVPRRAAE  FP LD+  Q P+QELIA+DLH VEWKFRHI+RGQP
Sbjct: 177 CKTLTASDTTTHGGFSVPRRAAEDCFPPLDYKEQRPSQELIAKDLHGVEWKFRHIYRGQP 236

Query: 176 KRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHI 235
           +RHLLTTGWS+FVS K LV+GD+VLF+  E   L LGIRRA RP   +P S++ S     
Sbjct: 237 RRHLLTTGWSIFVSQKNLVSGDAVLFLRGEGGNLRLGIRRAARPRNGLPESIIKSQYSGP 296

Query: 236 GLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEES 295
            +L++ A A +  S F VF++PRAS ++FV+P  KYVKA+ ++R+ VG RF+M F+ ++S
Sbjct: 297 DVLSSVATALSAKSTFHVFYSPRASHADFVVPYQKYVKAI-NSRIPVGTRFKMKFDLDDS 355

Query: 296 SVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 351
             RRY G +TGISD+DP RW NS WR + V WDE      Q RVS WEI+   + P
Sbjct: 356 PERRYSGVVTGISDMDPFRWPNSKWRCLMVRWDEDIMSNHQERVSPWEIDSSVSLP 411



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 43/111 (38%), Positives = 70/111 (63%), Gaps = 2/111 (1%)

Query: 674 QLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFV 732
           Q +  R+  KV+K GS VGR++D+SR + Y++L  EL ++F +E    DP   GW++++ 
Sbjct: 678 QSSGKRSCTKVHKQGSLVGRAIDLSRLNGYDDLLVELERLFNMEDLLRDP-NKGWRILYT 736

Query: 733 DRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRA 783
           D END++++GDDPW  F   V  I I + E+V+KM  +G+   + S  + A
Sbjct: 737 DSENDMMVVGDDPWHEFCEVVSKIHIYTQEEVEKMTIEGISDDTQSCLEEA 787


>gi|449443756|ref|XP_004139643.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
          Length = 693

 Score =  368 bits (944), Expect = 8e-99,   Method: Compositional matrix adjust.
 Identities = 180/341 (52%), Positives = 241/341 (70%), Gaps = 6/341 (1%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           L  ELW ACAGPLV +P  G RV YFPQGH EQ+  +TN+E++  IP++ +LPP+++C++
Sbjct: 20  LYEELWKACAGPLVEVPVDGERVFYFPQGHMEQLEESTNQELNHQIPHF-DLPPKILCRV 78

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTH 127
            N+ + A+ ETDEVYAQ+TL P + + +  +  P E    ++Q  + FCK LTASDTSTH
Sbjct: 79  VNIRLLAEKETDEVYAQITLYPEADQSEPQSADP-EPPERTRQTVHSFCKILTASDTSTH 137

Query: 128 GGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 187
           GGFSV R+ A +  P LD S   P QEL A+DLH  EWKF+HIFRGQP+RHLLTTGWS F
Sbjct: 138 GGFSVLRKHATECLPPLDMSQSTPTQELAAKDLHGYEWKFKHIFRGQPRRHLLTTGWSTF 197

Query: 188 VSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAAT 247
           V++KRLVAGD+ +F+  +  +L +G+RR  R  ++MPSSV+SS SMH+G+LA A+HA  T
Sbjct: 198 VTSKRLVAGDAFVFLRGDNGELRVGVRRQARQQSLMPSSVISSHSMHLGVLATASHAVRT 257

Query: 248 NSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGI 307
            + F V++ PR   S+F+I L KY++ V      VGMRF+M FE EES  RR+ GTI G+
Sbjct: 258 QTYFVVYYKPRT--SQFIISLNKYLETV-KNGYEVGMRFKMRFEGEESPERRFTGTIVGV 314

Query: 308 SDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 348
            D+ P +WS+S WRS+K+ WDE    +R  RVS WEIEP  
Sbjct: 315 GDMSP-QWSDSKWRSLKIQWDEPATIQRPERVSPWEIEPFV 354



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 91/186 (48%), Gaps = 24/186 (12%)

Query: 597 DAAVGTENCNTDSQN--SVVFGVHIDSSGLLL-------PTTVSSFTTSVDPGVSSMPLG 647
           D ++G      D +N  S+V  +   SS L++       P   +  T  VD G  S P  
Sbjct: 500 DISLGCRIFGIDLKNNCSIVPTLERRSSCLMMVTDGAKEPVVTAVVTPQVDAGNLSQPSK 559

Query: 648 DSGFHNSMYGCMQDSSELLHNVGQIDQLT--PTRTFVKVYKSG-SVGRSLDISRFSSYNE 704
           +           Q S+ELL    Q   ++   +RT  KV   G +VGR++D++    Y +
Sbjct: 560 E----------QQLSTELLTKGTQTKHISNLSSRTRTKVQMQGVAVGRAVDLTTLEGYED 609

Query: 705 LREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDV 764
           L +EL  +F I+G+      + W +VF D END++L+GDDPW  F   V  I I S E+V
Sbjct: 610 LIDELENVFEIKGELRG--INKWSIVFTDDENDMMLVGDDPWPEFCKMVKRIFICSSEEV 667

Query: 765 QKMGEQ 770
           +KM  +
Sbjct: 668 KKMSRE 673


>gi|73697834|gb|AAZ81521.1| auxin response factor 1 [Gossypium barbadense]
          Length = 673

 Score =  368 bits (944), Expect = 9e-99,   Method: Compositional matrix adjust.
 Identities = 183/343 (53%), Positives = 244/343 (71%), Gaps = 5/343 (1%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           L  ELWHACAGPLV+LP VG RV YFPQGH EQ+ A+ ++ ++  +P++ +LP +++C++
Sbjct: 19  LYRELWHACAGPLVTLPRVGERVYYFPQGHMEQLEASMHQGLEHQMPSF-DLPSKILCKV 77

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIE-LGIPSKQPTNYFCKTLTASDTST 126
            +V   A+ +TDEVYAQ+TL P    +Q +   P + L  P +   + FCKTLTASDTST
Sbjct: 78  ASVQRKAEPDTDEVYAQITLVP--EVDQSEVMSPDDPLQEPERCIVHSFCKTLTASDTST 135

Query: 127 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 186
           HGGFSV RR A+   P LD + QPP QELIA DLH  EW FRHIFRGQP+RHLLTTGWSV
Sbjct: 136 HGGFSVLRRHADDCLPPLDMTQQPPWQELIATDLHGNEWHFRHIFRGQPRRHLLTTGWSV 195

Query: 187 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 246
           FVS+K+LVAGD+ +F+      L +G+RR +R    MPSSV+SS SMH+G+LA A++A +
Sbjct: 196 FVSSKKLVAGDAFIFLRGANGDLRVGVRRLMRQQANMPSSVISSHSMHLGVLATASYALS 255

Query: 247 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 306
           T S F++F+ PR S SEF++ + KY++A  H ++SVGMRF+M FE EE   RR+ GTI G
Sbjct: 256 TRSMFSIFYKPRTSLSEFIVSVNKYLEARSH-KLSVGMRFKMRFEGEEVPERRFSGTIVG 314

Query: 307 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT 349
           +       W++S WRS+KV WDE ++  R  RVS WE+EPL  
Sbjct: 315 VEADKSSGWADSEWRSLKVQWDEPSSIIRPDRVSPWELEPLVA 357



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 61/90 (67%), Gaps = 2/90 (2%)

Query: 679 RTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 737
           R+  KV+  G +VGR++D++RF  Y +L ++L  MF I+G+     ++ WQ+V+ D E+D
Sbjct: 546 RSCTKVHMQGMAVGRAVDLTRFDCYEDLLKKLEYMFDIKGQLCGSTKN-WQVVYTDDEDD 604

Query: 738 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           ++++GDDPW  F S V  I I + E+V+K+
Sbjct: 605 MMMVGDDPWNEFCSMVRKIFIYTSEEVRKL 634


>gi|15239335|ref|NP_200853.1| auxin response factor 4 [Arabidopsis thaliana]
 gi|46396060|sp|Q9ZTX9.1|ARFD_ARATH RecName: Full=Auxin response factor 4
 gi|12744969|gb|AAK06864.1|AF344313_1 auxin response factor 4 [Arabidopsis thaliana]
 gi|4102598|gb|AAD01512.1| auxin response factor 4 [Arabidopsis thaliana]
 gi|9757747|dbj|BAB08228.1| auxin response factor 4 [Arabidopsis thaliana]
 gi|19424051|gb|AAL87308.1| auxin response factor ARF4 [Arabidopsis thaliana]
 gi|21280887|gb|AAM45025.1| auxin response factor ARF4 [Arabidopsis thaliana]
 gi|332009949|gb|AED97332.1| auxin response factor 4 [Arabidopsis thaliana]
          Length = 788

 Score =  367 bits (943), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 192/368 (52%), Positives = 244/368 (66%), Gaps = 14/368 (3%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           + SELWHACAGPL  LP  G  VVYFPQGH EQ A  +       IP + +L PQ++C++
Sbjct: 62  IYSELWHACAGPLTCLPKKGNVVVYFPQGHLEQDAMVSYSS-PLEIPKF-DLNPQIVCRV 119

Query: 68  HNVTMHADVETDEVYAQMTLQPLSP--------EEQKDTFVPIELGIPS--KQPTNYFCK 117
            NV + A+ +TDEVY Q+TL PL          +E K+     E    S  K+  + FCK
Sbjct: 120 VNVQLLANKDTDEVYTQVTLLPLQEFSMLNGEGKEVKELGGEEERNGSSSVKRTPHMFCK 179

Query: 118 TLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKR 177
           TLTASDTSTHGGFSVPRRAAE  F  LD+  Q P+QELIA+DLH VEWKFRHI+RGQP+R
Sbjct: 180 TLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRR 239

Query: 178 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGL 237
           HLLTTGWS+FVS K LV+GD+VLF+ +E  +L LGIRRA RP   +P S++  +S    +
Sbjct: 240 HLLTTGWSIFVSQKNLVSGDAVLFLRDEGGELRLGIRRAARPRNGLPDSIIEKNSCS-NI 298

Query: 238 LAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSV 297
           L+  A+A +T S F VF++PRA+ +EFVIP  KY+ ++  + V +G RFRM FE ++S  
Sbjct: 299 LSLVANAVSTKSMFHVFYSPRATHAEFVIPYEKYITSI-RSPVCIGTRFRMRFEMDDSPE 357

Query: 298 RRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLF 357
           RR  G +TG+ DLDP RW NS WR + V WDES   + Q RVS WEI+P  + P      
Sbjct: 358 RRCAGVVTGVCDLDPYRWPNSKWRCLLVRWDESFVSDHQERVSPWEIDPSVSLPHLSIQS 417

Query: 358 PLRLKRPW 365
             R KRPW
Sbjct: 418 SPRPKRPW 425



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/97 (40%), Positives = 65/97 (67%), Gaps = 2/97 (2%)

Query: 674 QLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFV 732
           Q +  R   KV+K GS VGR++D+SR + Y++L  EL ++F +EG   DP + GW++++ 
Sbjct: 660 QSSSKRICTKVHKQGSQVGRAIDLSRLNGYDDLLMELERLFNMEGLLRDPEK-GWRILYT 718

Query: 733 DRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGE 769
           D END++++GDDPW  F + VW I + + E+V+   +
Sbjct: 719 DSENDMMVVGDDPWHDFCNVVWKIHLYTKEEVENAND 755


>gi|359479063|ref|XP_002285019.2| PREDICTED: auxin response factor 4-like [Vitis vinifera]
 gi|297746231|emb|CBI16287.3| unnamed protein product [Vitis vinifera]
          Length = 798

 Score =  367 bits (942), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 186/352 (52%), Positives = 240/352 (68%), Gaps = 15/352 (4%)

Query: 11  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 70
           ELWH CAG L SLP  G  VVYFPQGH EQ AA+++      I  + +LPPQ+ C++ NV
Sbjct: 55  ELWHVCAGRLTSLPKKGNVVVYFPQGHLEQ-AASSSPFPPMDISTF-DLPPQIFCRVVNV 112

Query: 71  TMHADVETDEVYAQMTLQPLSPEEQKDTFVPIEL-----------GIPSKQPTNYFCKTL 119
            + A+ E DEVY Q+TL P  PE         EL           G P+K   + FCKTL
Sbjct: 113 QLLANKENDEVYTQVTLLP-QPELAGINLEGKELEGLGVDEEGGGGSPTKSTPHMFCKTL 171

Query: 120 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 179
           TASDTSTHGGFSVPRRAAE  FP LD+  Q P+QEL+A+DLH VEW+FRHI+RGQP+RHL
Sbjct: 172 TASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHL 231

Query: 180 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLA 239
           LTTGWS+FVS K LV+GD+VLF+  E  +L LGIRRA+RP   +P S++ + + +  +L+
Sbjct: 232 LTTGWSIFVSQKNLVSGDAVLFLRGEGGELRLGIRRAVRPRNGLPDSIIGNQNSYPNVLS 291

Query: 240 AAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRR 299
            AA+A AT S F VF++PRAS +EFVIP  KYVK++ +  +S+G RF+M ++ ++S  RR
Sbjct: 292 LAANAVATKSMFHVFYSPRASHAEFVIPYQKYVKSITNP-ISIGTRFKMRYDMDDSPERR 350

Query: 300 YMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 351
             G +TGI DLDP RW NS WR + V WD+    + Q RVS WEI+P  + P
Sbjct: 351 SSGVVTGIGDLDPYRWPNSKWRCLMVRWDDDIVSDPQERVSPWEIDPSVSLP 402



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 47/121 (38%), Positives = 72/121 (59%), Gaps = 2/121 (1%)

Query: 648 DSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELR 706
           D  F  +  GC      L        Q +  R+  KV+K G+ VGR++D+SR + Y +L 
Sbjct: 639 DDTFSGTAAGCKLFGFSLTGETPPNSQNSGKRSCTKVHKQGNLVGRAIDLSRLNGYGDLF 698

Query: 707 EELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQK 766
            EL ++FG+EG   DP + GWQ+++ D END++++GDDPW  F + V  I I + E+V+K
Sbjct: 699 SELERLFGMEGLLRDPDK-GWQILYTDSENDMMVVGDDPWHEFCNVVSKIHIYTQEEVEK 757

Query: 767 M 767
           M
Sbjct: 758 M 758


>gi|297724575|ref|NP_001174651.1| Os06g0196700 [Oryza sativa Japonica Group]
 gi|255676813|dbj|BAH93379.1| Os06g0196700 [Oryza sativa Japonica Group]
          Length = 309

 Score =  365 bits (937), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 191/264 (72%), Positives = 227/264 (85%), Gaps = 3/264 (1%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ K +NSELWHACAGPLVSLP VG+ VVYFPQGHSEQVAA+ +KE+D+ IP YP+LP +
Sbjct: 16  GEKKAINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMHKELDN-IPGYPSLPSK 74

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP-SKQPTNYFCKTLTA 121
           LIC+L ++T+HAD ETDEVYAQMTLQP++ +  +D  +  ELG+  +KQP  +FCKTLTA
Sbjct: 75  LICKLLSLTLHADSETDEVYAQMTLQPVN-KYDRDAMLASELGLKQNKQPAEFFCKTLTA 133

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAEK+FP LDF++QPPAQELIA+DLHD+ WKFRHI+RGQPKRHLLT
Sbjct: 134 SDTSTHGGFSVPRRAAEKIFPPLDFTMQPPAQELIAKDLHDISWKFRHIYRGQPKRHLLT 193

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWSVFVS KRL+AGDSVLFI +EK+QLLLGIRRA RP   + SSVLSSDSMHIG+LAAA
Sbjct: 194 TGWSVFVSTKRLLAGDSVLFIRDEKSQLLLGIRRATRPQPALSSSVLSSDSMHIGILAAA 253

Query: 242 AHAAATNSCFTVFFNPRASPSEFV 265
           AHAAA +S FT+F+NPR   S  +
Sbjct: 254 AHAAANSSPFTIFYNPRYYSSYLI 277


>gi|297796993|ref|XP_002866381.1| hypothetical protein ARALYDRAFT_496192 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312216|gb|EFH42640.1| hypothetical protein ARALYDRAFT_496192 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 791

 Score =  365 bits (936), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 190/368 (51%), Positives = 242/368 (65%), Gaps = 14/368 (3%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           + SELWHACAGPL  LP  G  VVYFPQGH EQ A  +       IP + +L PQ+ C++
Sbjct: 57  IYSELWHACAGPLTCLPKKGNVVVYFPQGHLEQDAMVSYSS-PLEIPKF-DLNPQIFCRV 114

Query: 68  HNVTMHADVETDEVYAQMTLQPLSP--------EEQKDTFVPIELGIPS--KQPTNYFCK 117
            +V + A+ ETDEVY Q+TL PL          +E K+     E  + S  K+  + FCK
Sbjct: 115 VHVQLLANKETDEVYTQVTLLPLQEFSMLNTEGKEVKELGGDEERNVSSSVKRTPHMFCK 174

Query: 118 TLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKR 177
           TLTASDTSTHGGFSVPRRAAE  F  LD+  Q P+QELIA+DLH VEWKFRHI+RGQP+R
Sbjct: 175 TLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRR 234

Query: 178 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGL 237
           HLLTTGWS+FVS K L +GD+VLF+ +E  +L LGIRRA RP   +P S++  +S    +
Sbjct: 235 HLLTTGWSIFVSQKNLASGDAVLFLRDEGGELRLGIRRAARPRNGLPDSIIEKNSCS-NI 293

Query: 238 LAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSV 297
           L+  A+A +T S F VF++PRA+ +EFVIP  KY+ ++    + +G RFRM FE ++S  
Sbjct: 294 LSLLANAVSTKSMFHVFYSPRATHAEFVIPYEKYITSI-RNPICIGTRFRMRFEMDDSPE 352

Query: 298 RRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLF 357
           RR  G +TG+ DLDP RW NS WR + V WDES   + Q RVS WEI+P  + P      
Sbjct: 353 RRCAGVVTGVCDLDPYRWPNSKWRCLLVRWDESFVSDHQERVSPWEIDPSISLPHLSIQS 412

Query: 358 PLRLKRPW 365
             R KRPW
Sbjct: 413 SPRPKRPW 420



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/97 (40%), Positives = 64/97 (65%), Gaps = 2/97 (2%)

Query: 674 QLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFV 732
           Q +  R   KV+K GS VGR++D+SR + Y++L  EL ++F +EG   DP   GW++++ 
Sbjct: 663 QSSSKRICTKVHKQGSQVGRAIDLSRLNGYDDLLTELERLFNMEGLLRDP-EKGWRILYT 721

Query: 733 DRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGE 769
           D END++++GDDPW  F + VW I + + E+V+   +
Sbjct: 722 DSENDMMVVGDDPWHDFCNVVWKIHLYTKEEVENAND 758


>gi|356541288|ref|XP_003539110.1| PREDICTED: auxin response factor 4-like [Glycine max]
          Length = 791

 Score =  364 bits (935), Expect = 9e-98,   Method: Compositional matrix adjust.
 Identities = 187/352 (53%), Positives = 236/352 (67%), Gaps = 14/352 (3%)

Query: 11  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 70
           ELWHACAGPL SLP  G  VVYFPQGH EQVA+ +       IP Y +L PQ+ C++ NV
Sbjct: 53  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASFS-PFTPLEIPTY-DLQPQIFCRVVNV 110

Query: 71  TMHADVETDEVYAQMTLQPLSPEE----------QKDTFVPIELGIPSKQPTNYFCKTLT 120
            + A+ E DEVY Q+TL P +  E          +       +   P+K   + FCKTLT
Sbjct: 111 QLLANKENDEVYTQVTLLPQAELEGMYLEGKELEELGAEEEGDDRSPTKSTPHMFCKTLT 170

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
           ASDTSTHGGFSVPRRAAE  FP LD+  Q P+QEL+A+DLHDVEWKFRHI+RGQP+RHLL
Sbjct: 171 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHDVEWKFRHIYRGQPRRHLL 230

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 240
           TTGWS+FVS K LV+GD+VLF+  E  +L LGIRRA+RP   +P SV+ S + +  +L++
Sbjct: 231 TTGWSIFVSQKNLVSGDAVLFLRGENGELRLGIRRAVRPRNDLPESVIGSQNCYPNVLSS 290

Query: 241 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 300
            A+A +T S F VF++PRAS ++FV+P  KYVK++    VS+G RF+M FE +ES  RR 
Sbjct: 291 VANAISTKSKFHVFYSPRASQADFVVPYQKYVKSI-KNPVSIGTRFKMRFEMDESQERRC 349

Query: 301 M-GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 351
             G + G SDLDP RW  S WR + V WDE      + RVS WEI+P    P
Sbjct: 350 CSGMLIGTSDLDPYRWPKSKWRCLMVRWDEDIETNHKDRVSPWEIDPSAPLP 401



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 66/95 (69%), Gaps = 2/95 (2%)

Query: 674 QLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFV 732
           Q +  R+  KV+K GS VGR++D+SR S YN+L  EL ++F +EG  +DP + GW++++ 
Sbjct: 658 QNSAKRSCTKVHKQGSLVGRAIDLSRLSGYNDLLSELERLFSMEGLLKDPDK-GWKILYT 716

Query: 733 DRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           D END++++GDDPW  F   V  I I + E+V+KM
Sbjct: 717 DSENDIMVVGDDPWHEFCDVVSKIHIYTQEEVEKM 751


>gi|224072482|ref|XP_002303753.1| predicted protein [Populus trichocarpa]
 gi|222841185|gb|EEE78732.1| predicted protein [Populus trichocarpa]
          Length = 751

 Score =  363 bits (933), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 179/352 (50%), Positives = 253/352 (71%), Gaps = 16/352 (4%)

Query: 19  PLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSH-IPNYPNLPPQLICQLHNVTMHADVE 77
           PLV++P  G  V YFPQGH EQV A+TN+  D   +P Y NL P+++C++ NV + A+++
Sbjct: 4   PLVTVPRQGELVYYFPQGHIEQVEASTNQVADDQQMPAY-NLSPKILCRVVNVQLKAELD 62

Query: 78  TDEVYAQMTLQPLSPEEQKDTFVPIELGIP---SKQPTNYFCKTLTASDTSTHGGFSVPR 134
           TDEV+AQ+ L P   E Q+D  +  E  +P   ++   + FCK LTASDTSTHGGFSV +
Sbjct: 63  TDEVFAQVILLP---ETQQDVELVEEEDLPPLPARPRVHSFCKMLTASDTSTHGGFSVLK 119

Query: 135 RAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLV 194
           R A++  P LD SLQPP QEL+A+DLH  EW+FRHIFRGQP+RHLL +GWS+FVSAK+LV
Sbjct: 120 RHADECLPPLDMSLQPPVQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSLFVSAKKLV 179

Query: 195 AGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVF 254
           AGD+ +F+  E  +L +G+RRA+R P+ +PSS++SS SMHIG+LA A HA +T S FTV+
Sbjct: 180 AGDAFIFLRGETEELRVGVRRALRQPSKIPSSLISSHSMHIGILATAWHAVSTGSMFTVY 239

Query: 255 FNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVR 314
           + PR SP+EF+IP+ KY+++V     ++GMRF+M FE +++  +R+ GT+ G+ + DP +
Sbjct: 240 YKPRTSPAEFIIPVDKYMESV-KINYAIGMRFKMRFEADDAPEQRFSGTVIGVEEADPKK 298

Query: 315 WSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL---RLKR 363
           W  S+WR +KV WDE++   R  RVS W++EP     + PS+ P+   RLKR
Sbjct: 299 WPRSNWRCLKVHWDETSPVHRPDRVSPWKVEPA----LAPSMDPVSGCRLKR 346



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 43/91 (47%), Positives = 61/91 (67%), Gaps = 2/91 (2%)

Query: 678 TRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
            R  VKV+K G+ VGRSLD+S+F+ YNEL  EL Q+F   G+   P +  W +VF D E+
Sbjct: 608 ARRCVKVHKQGTAVGRSLDLSKFNGYNELTAELDQIFEFNGELVAPNKD-WLIVFTDDED 666

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           D++L+GDDPW+ F S V  I I + E++ +M
Sbjct: 667 DMMLVGDDPWQEFCSMVRRIFIYTKEEINRM 697


>gi|19310546|gb|AAL85006.1| unknown protein [Arabidopsis thaliana]
          Length = 1045

 Score =  363 bits (932), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 191/306 (62%), Positives = 231/306 (75%), Gaps = 8/306 (2%)

Query: 108 SKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKF 167
           ++QP  +FCKTLTASDTSTHGGFSVPRRAAEK+FP+LDFS+QPP QEL+A+D+HD  W F
Sbjct: 1   NRQPNEFFCKTLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTF 60

Query: 168 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSV 227
           RHI+RGQPKRHLLTTGWSVFVS KRL AGDSVLFI + K QLLLGIRRA R    + SSV
Sbjct: 61  RHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSV 120

Query: 228 LSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFR 287
           +SSDSMHIG+LAAAAHA A NS FT+F+NPRA+P+EFV+PL KY KA++  +VS+GMRFR
Sbjct: 121 ISSDSMHIGVLAAAAHANANNSPFTIFYNPRAAPAEFVVPLAKYTKAMY-AQVSLGMRFR 179

Query: 288 MLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 347
           M+FETEE  VRRYMGT+TGISDLDPVRW NS WR++++GWDES AG+R  RVS+W+IEP+
Sbjct: 180 MIFETEECGVRRYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPV 239

Query: 348 TTFPMYPSLFPLRLKRPWHPSTSSFNDNRDETASGLN----WLRGGTGEQGLTTLNFQSL 403
            T P Y  + P    RP         D+  +  S L     WL      +  ++  F  L
Sbjct: 240 LT-PFY--ICPPPFFRPRFSGQPGMPDDETDMESALKRAMPWLDNSLEMKDPSSTIFPGL 296

Query: 404 GMFPWM 409
            +  WM
Sbjct: 297 SLVQWM 302



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 62/112 (55%), Positives = 81/112 (72%), Gaps = 1/112 (0%)

Query: 679  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 738
            RT+ KV K GSVGRS+D++R+  Y+ELR +L +MFGIEG+ EDP  S W+LV+VD END+
Sbjct: 918  RTYTKVQKRGSVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHENDI 977

Query: 739  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANSRGNCG 790
            LL+GDDPWE FV+ V  IKILS  +VQ+M   G  +  P + Q A S G+ G
Sbjct: 978  LLVGDDPWEEFVNCVQSIKILSSAEVQQMSLDGNFAGVPVTNQ-ACSGGDSG 1028


>gi|301793219|emb|CBA12000.1| putative auxin response factor 3 [Illicium parviflorum]
          Length = 837

 Score =  363 bits (931), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 188/377 (49%), Positives = 248/377 (65%), Gaps = 23/377 (6%)

Query: 11  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 70
           ELW ACAGP++SLP  GT VVYFPQGH EQ         D        +PP L C++ NV
Sbjct: 33  ELWRACAGPVISLPRKGTIVVYFPQGHLEQAPKFRAFAHD--------IPPHLFCRVLNV 84

Query: 71  TMHADVETDEVYAQMTLQP--------LSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
            +HA++ TDEVYAQ++L P        L  + + +        + +  P + FCKTLTAS
Sbjct: 85  NLHAEIATDEVYAQVSLVPEPEVGAKSLDEDGEGNGEEEEIEELSTATP-HMFCKTLTAS 143

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSVPRRAAE  FP+LD+  Q P+QEL+A+DLH VEWKFRHI+RGQP+RHLLTT
Sbjct: 144 DTSTHGGFSVPRRAAEDCFPALDYKQQRPSQELVAKDLHGVEWKFRHIYRGQPRRHLLTT 203

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWS FV+ K+LV+GD+VLF+  E  +L LGIRRA RP   +P S+L S ++++  LAA +
Sbjct: 204 GWSSFVNQKKLVSGDAVLFLRGENGELRLGIRRAARPEGGVPYSILCSQNLNLSALAAVS 263

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 302
            A +T S F V++NPRASP+EF+IP  K+ K++ +  +S+G RF+M +ETE+++ +R  G
Sbjct: 264 TAVSTKSMFHVYYNPRASPAEFIIPYRKFSKSI-NQPLSIGTRFKMRYETEDATEQRPTG 322

Query: 303 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEP---LTTF--PMYPSLF 357
            ITGI D+DPVRW  S WR + V WDE      Q +VS WEIEP   L+ F  P+ P   
Sbjct: 323 LITGIGDIDPVRWPGSKWRCLMVRWDEEAGHYCQDKVSPWEIEPSGSLSGFSSPLTPGSK 382

Query: 358 PLRLKRPWHPSTSSFND 374
             R+  P   +   F D
Sbjct: 383 KPRISLPSIKADFPFRD 399



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 44/119 (36%), Positives = 72/119 (60%), Gaps = 2/119 (1%)

Query: 666 LHNVGQIDQLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLR 724
           LH   Q    T  R+  KV++ G+ VGR++D+S+   Y++L  EL ++F +EG   DP +
Sbjct: 698 LHAEVQSSTKTAGRSCTKVHRQGNLVGRAIDLSKLDGYDDLITELERLFNMEGLLNDPGK 757

Query: 725 SGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRA 783
            GWQ+V+ D E+D++L+GDDPW+ F + V  I I + ++V+ M   G    + S  + A
Sbjct: 758 -GWQVVYTDDEDDMMLVGDDPWQEFCNIVSKILIYTHDEVELMVPGGTSDDAHSCSEEA 815


>gi|356544621|ref|XP_003540747.1| PREDICTED: auxin response factor 4-like [Glycine max]
          Length = 791

 Score =  362 bits (929), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 195/368 (52%), Positives = 243/368 (66%), Gaps = 22/368 (5%)

Query: 11  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 70
           ELWHACAGPL SL   G  VVYFPQGH EQVA+ +       IP Y +L PQ+ C++ NV
Sbjct: 54  ELWHACAGPLTSLLKKGNVVVYFPQGHLEQVASFS-PFTPLEIPTY-DLQPQIFCRVVNV 111

Query: 71  TMHADVETDEVYAQMTLQPLSPE------EQKDTFVPIELGI--------PSKQPTNYFC 116
            + A+ E DEVY Q+TL P  PE      E K+     ELG         P+K   + FC
Sbjct: 112 QLLANKENDEVYTQVTLLP-QPELEGMYSEGKEL---EELGAEEDGDERSPTKSTPHMFC 167

Query: 117 KTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPK 176
           KTLTASDTSTHGGFSVPRRAAE  FP LD+  Q P+QEL+A+DLH VEWKFRHI+RGQP+
Sbjct: 168 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWKFRHIYRGQPR 227

Query: 177 RHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIG 236
           RHLLTTGWS+FVS K LV+GD+VLF+  E  +L LGIRRA+RP   +P SV+ S + +  
Sbjct: 228 RHLLTTGWSIFVSQKNLVSGDAVLFLRGENGELRLGIRRAVRPRNDLPESVIGSQNCYSN 287

Query: 237 LLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS 296
           +L++ A+A +T S F VF++PRAS ++FV+P  KYVK++    VS+G RF+M FE +ES 
Sbjct: 288 VLSSVANAISTKSKFHVFYSPRASHADFVVPYQKYVKSI-KNPVSIGTRFKMRFEMDESQ 346

Query: 297 VRRY-MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS 355
            RR   GT+   SDLDP RW+ S WR + V WDE      Q RVS WEI+P    P    
Sbjct: 347 ERRCSSGTLIATSDLDPYRWAKSKWRCLMVRWDEDIETNHQDRVSPWEIDPSAPLPPLSI 406

Query: 356 LFPLRLKR 363
               RLK+
Sbjct: 407 QSSPRLKK 414



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 66/95 (69%), Gaps = 2/95 (2%)

Query: 674 QLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFV 732
           Q +  R+  KV+K GS VGR++D+SR S YN+L  EL ++F +EG  +DP + GW++++ 
Sbjct: 658 QNSAKRSCTKVHKQGSLVGRAIDLSRLSGYNDLLSELERLFSMEGLLKDPDK-GWRILYT 716

Query: 733 DRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           D END++++GDDPW  F   V  I I + E+V+KM
Sbjct: 717 DSENDIMVVGDDPWHEFCDVVSKIHIYTQEEVEKM 751


>gi|224057828|ref|XP_002299344.1| predicted protein [Populus trichocarpa]
 gi|222846602|gb|EEE84149.1| predicted protein [Populus trichocarpa]
          Length = 376

 Score =  362 bits (928), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 189/354 (53%), Positives = 255/354 (72%), Gaps = 9/354 (2%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSH-IPNYPNLPPQLICQ 66
           L  ELWHACAGPLV++P  G  V YFPQGH EQV A+TN+  D   +P Y NLPP+++C+
Sbjct: 4   LYKELWHACAGPLVTVPRQGELVYYFPQGHIEQVEASTNQVADDQQMPAY-NLPPKILCR 62

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQP-TNYFCKTLTASDTS 125
           + NV + A+++TDEV+AQ+ L P++ E+  D     +L  P  +P  + FCK LTASDTS
Sbjct: 63  VVNVQLKAELDTDEVFAQVILLPVA-EQDVDLVEKEDLPPPPARPRVHSFCKMLTASDTS 121

Query: 126 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 185
           THGGFSV RR A++  P LD SLQPPAQEL+A+DLH  EW+FRHIFRGQP+RHLL +GWS
Sbjct: 122 THGGFSVLRRHADECLPPLDMSLQPPAQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWS 181

Query: 186 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 245
           +FVSAK+LVAGD+ +F+  E  +L +G+RRA+  P+ +PSSV+SS SMHIG+LA   HA 
Sbjct: 182 LFVSAKKLVAGDAFIFLRGETEELRVGVRRALSQPSNVPSSVMSSHSMHIGILATVWHAV 241

Query: 246 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 305
           +T S FTV++ PR SP+EF+IP+ KY ++V     ++GMRF+M FE EE+  +R+ GT+ 
Sbjct: 242 STGSMFTVYYKPRTSPAEFIIPIDKYRESV-KINYAIGMRFKMKFEAEEAPEQRFSGTVI 300

Query: 306 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL 359
           G+ + DP +W  S WR +KV WDE++   R  RVS W+IE      + PSL P+
Sbjct: 301 GVEEADPKKWPRSKWRCLKVRWDETSPVHRPDRVSPWKIE----RALAPSLDPV 350


>gi|379323198|gb|AFD01298.1| auxin response factor 4 [Brassica rapa subsp. pekinensis]
          Length = 758

 Score =  362 bits (928), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 189/374 (50%), Positives = 240/374 (64%), Gaps = 26/374 (6%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           + SELWHACAGPL SLP  G  VVYFPQGH EQ  A  +      IP   +L PQ+ C++
Sbjct: 50  IYSELWHACAGPLTSLPKKGNVVVYFPQGHLEQ-GAMVSYSSPLDIPKL-DLSPQIFCRV 107

Query: 68  HNVTMHADVETDEVYAQMTLQPLSP----------------EEQKDTFVPIELGIPSKQP 111
            NV + A+ ETDEVY Q+TL PL                  +E+K+    +      K+ 
Sbjct: 108 ANVHLLANKETDEVYTQVTLLPLQELSVLNGEGKEVRELGGDEEKNGSSSV------KKT 161

Query: 112 TNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIF 171
            + FCKTLTASDTSTHGGFSVPRRAAE  F  LD+  Q P+QELIA+DLH VEWKFRHI+
Sbjct: 162 PHMFCKTLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIY 221

Query: 172 RGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSD 231
           RGQP+RHLLTTGWS+FVS K LV+GD+VLF+ +E  +L LGIRR+ RP   +P S++   
Sbjct: 222 RGQPRRHLLTTGWSIFVSQKSLVSGDAVLFLRDENGELRLGIRRSARPRNGLPDSIIQKY 281

Query: 232 SMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFE 291
           S    +L+  A+A +  S F VF++PRA+ SEFVIP  KY+ ++    + +G RFRM FE
Sbjct: 282 SSS-SILSLVANAVSNKSMFHVFYSPRATHSEFVIPYEKYITSI-KNPICIGTRFRMRFE 339

Query: 292 TEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 351
            ++S  RR  G +TG+ D+DP RW NS WR + V WDES   + Q RVS WEI+P  + P
Sbjct: 340 MDDSPERRCAGVVTGVCDMDPYRWPNSKWRCLLVRWDESFMSDHQERVSPWEIDPSGSLP 399

Query: 352 MYPSLFPLRLKRPW 365
                   R KRPW
Sbjct: 400 PLSIQSSPRPKRPW 413



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 40/93 (43%), Positives = 63/93 (67%), Gaps = 2/93 (2%)

Query: 674 QLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFV 732
           Q +  R   KV+K GS VGR++D+SR + YN+L  EL ++F +EG   DP + GW++++ 
Sbjct: 632 QSSSKRICTKVHKQGSLVGRAIDLSRLNGYNDLLTELERLFNMEGLLRDPEK-GWRILYT 690

Query: 733 DRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQ 765
           D END++++GDDPW  F S V  I + + E+V+
Sbjct: 691 DSENDMMVVGDDPWHDFCSVVLKIHLYTKEEVE 723


>gi|18412151|ref|NP_567119.1| auxin response factor 18 [Arabidopsis thaliana]
 gi|46576636|sp|Q9C5W9.1|ARFR_ARATH RecName: Full=Auxin response factor 18
 gi|12248007|gb|AAG50095.1|AF334717_1 auxin response factor ARF18 [Arabidopsis thaliana]
 gi|16604603|gb|AAL24094.1| auxin response factor ARF18 [Arabidopsis thaliana]
 gi|17979225|gb|AAL49929.1| AT3g61830/F15G16_220 [Arabidopsis thaliana]
 gi|20259231|gb|AAM14331.1| putative auxin response factor protein [Arabidopsis thaliana]
 gi|332646743|gb|AEE80264.1| auxin response factor 18 [Arabidopsis thaliana]
          Length = 602

 Score =  361 bits (927), Expect = 8e-97,   Method: Compositional matrix adjust.
 Identities = 189/370 (51%), Positives = 252/370 (68%), Gaps = 12/370 (3%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSH-IPNYPNLPPQLICQ 66
           L +ELW  CAGPLV +P    RV YFPQGH EQ+ A+TN+ ++S  IP + +LPP+++C+
Sbjct: 22  LYTELWKVCAGPLVEVPRAQERVFYFPQGHMEQLVASTNQGINSEEIPVF-DLPPKILCR 80

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 126
           + +VT+ A+ ETDEVYAQ+TLQP   + +  +  P  +G P+KQ  + F K LTASDTST
Sbjct: 81  VLDVTLKAEHETDEVYAQITLQPEEDQSEPTSLDPPIVG-PTKQEFHSFVKILTASDTST 139

Query: 127 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 186
           HGGFSV R+ A +  PSLD +   P QEL+ RDLH  EW+F+HIFRGQP+RHLLTTGWS 
Sbjct: 140 HGGFSVLRKHATECLPSLDMTQATPTQELVTRDLHGFEWRFKHIFRGQPRRHLLTTGWST 199

Query: 187 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 246
           FVS+KRLVAGD+ +F+  E   L +G+RR  R  + MP+SV+SS SMH+G+LA A+HA  
Sbjct: 200 FVSSKRLVAGDAFVFLRGENGDLRVGVRRLARHQSTMPTSVISSQSMHLGVLATASHAVR 259

Query: 247 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 306
           T + F VF+ PR   S+F++ + KY++A+ H   S+G RFRM FE EES  R + GTI G
Sbjct: 260 TTTIFVVFYKPRI--SQFIVGVNKYMEAIKHG-FSLGTRFRMRFEGEESPERIFTGTIVG 316

Query: 307 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPM-YPSLFP---LRL 361
             DL   +W  S WRS++V WDE T  +R  +VS WEIEP L T P+  P+  P    + 
Sbjct: 317 SGDLS-SQWPASKWRSLQVQWDEPTTVQRPDKVSPWEIEPFLATSPISTPAQQPQSKCKR 375

Query: 362 KRPWHPSTSS 371
            RP  PS  +
Sbjct: 376 SRPIEPSVKT 385



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 3/91 (3%)

Query: 678 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           +R+  KV   G +VGR++D++   SY+EL +EL +MF I+G+     R  W +VF D E 
Sbjct: 488 SRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQGQLL--ARDKWIVVFTDDEG 545

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           D++L GDDPW  F      I I S ++V+KM
Sbjct: 546 DMMLAGDDPWNEFCKMAKKIFIYSSDEVKKM 576


>gi|63095201|gb|AAY32331.1| ARF1 [Phyllostachys praecox]
          Length = 362

 Score =  361 bits (926), Expect = 9e-97,   Method: Compositional matrix adjust.
 Identities = 182/345 (52%), Positives = 239/345 (69%), Gaps = 13/345 (3%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           L  ELW ACAGPL ++P VG RV YFPQGH EQV A+TN+  +       NLP ++ C++
Sbjct: 22  LFVELWKACAGPLAAVPAVGERVFYFPQGHIEQVEASTNQVAEQQGTPLYNLPWKIPCKV 81

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIEL---------GIPSKQPTNYFCKT 118
            NV + A+ +TDEVYAQ+TL P   E+++D  V  E           +  +   + FCKT
Sbjct: 82  MNVELKAEQDTDEVYAQLTLLP---EKKQDENVSKEEEEVVPDAPPAVAERTRVHSFCKT 138

Query: 119 LTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRH 178
           LTASDTSTHGGFSV RR A++  P LD S  PP QEL+A+DLH VEW FRHIFRGQP+RH
Sbjct: 139 LTASDTSTHGGFSVLRRHADECLPPLDMSQHPPTQELVAKDLHGVEWPFRHIFRGQPRRH 198

Query: 179 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLL 238
           LL +GWSVFVSAKRLVAGD+ +F+  E  +L +G+RRA+R    +PSSV+SS SMH+G+L
Sbjct: 199 LLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQRANIPSSVISSHSMHLGVL 258

Query: 239 AAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVR 298
           A A H A T + FTV++ PR SP+EFV+P   + +++     S+GMRF+M FE EE++ +
Sbjct: 259 ATAWHVANTGTMFTVYYKPRTSPAEFVVPRDWFDESLKRNH-SIGMRFKMRFEGEEAAEQ 317

Query: 299 RYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWE 343
           R+ GTI GI D DP  W +S WRS+KV WDE+++  R  RVS W+
Sbjct: 318 RFTGTIVGIGDSDPSGWVDSKWRSLKVRWDEASSVPRPERVSPWQ 362


>gi|87241206|gb|ABD33064.1| Transcriptional factor B3; Auxin response factor;
           Aux/IAA_ARF_dimerisation [Medicago truncatula]
          Length = 810

 Score =  360 bits (924), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 185/364 (50%), Positives = 240/364 (65%), Gaps = 14/364 (3%)

Query: 11  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 70
           ELWHACAGPL SLP  G  VVYFPQGH EQVA+ +       IP Y  L PQ++C++ NV
Sbjct: 56  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASLSLFS-SLEIPTY-GLQPQILCRVVNV 113

Query: 71  TMHADVETDEVYAQMTLQPLSP-------EEQKDTFVPIELG---IPSKQPTNYFCKTLT 120
            + A+ E DEVY Q+ L P +        +++ +     + G    P+K  ++ FCKTLT
Sbjct: 114 QLLANKENDEVYTQVALLPQAELAGMCLDDKEPEGLEADDEGNGRSPTKLASHMFCKTLT 173

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
           ASDTSTHGGFSVPRRAAE  FP LD+  Q P+QEL+A+DLH V WKFRHI+RGQP+RHLL
Sbjct: 174 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVGWKFRHIYRGQPRRHLL 233

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 240
           TTGWS+FVS K LV+GD+VLF+  E  +L LGIRRA RP   +P S++ + S     L++
Sbjct: 234 TTGWSIFVSQKNLVSGDAVLFLRGENGELRLGIRRAARPRNGLPESIIGNQSCSPSFLSS 293

Query: 241 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 300
            A+A +  S F VF++PRAS ++FV+P  KY K++    V++G RF+M FE +ES  RR 
Sbjct: 294 VANAISAKSMFHVFYSPRASHADFVVPYQKYAKSI-RNPVTIGTRFKMKFEMDESPERRC 352

Query: 301 -MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL 359
             G +TG+SDLDP +W  S WR + V WDE      Q RVS WEI+P T+ P        
Sbjct: 353 SSGIVTGMSDLDPYKWPKSKWRCLMVRWDEDIGANHQDRVSPWEIDPSTSLPPLNIQSSR 412

Query: 360 RLKR 363
           RLK+
Sbjct: 413 RLKK 416



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 45/95 (47%), Positives = 67/95 (70%), Gaps = 2/95 (2%)

Query: 674 QLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFV 732
           Q +  R+  KV+K GS VGR++D+SR SSYN+L  EL ++FG+EG   DP + GW++++ 
Sbjct: 677 QNSAKRSCTKVHKQGSLVGRAIDLSRLSSYNDLVSELERLFGMEGLLRDPDK-GWRILYT 735

Query: 733 DRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           D END++++GDDPW  F   V  I I + E+V+KM
Sbjct: 736 DSENDIMVVGDDPWHEFCDMVSKIHIYTQEEVEKM 770


>gi|379323232|gb|AFD01315.1| auxin response factor 18-1 [Brassica rapa subsp. pekinensis]
          Length = 1055

 Score =  359 bits (922), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 184/358 (51%), Positives = 247/358 (68%), Gaps = 9/358 (2%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSH-IPNYPNLPPQLICQ 66
           L +ELW ACAGPLV +P VG RV YFPQGH EQ+ A+TN+ ++S  IP++  LPP+++CQ
Sbjct: 21  LYTELWKACAGPLVEVPLVGERVFYFPQGHMEQLVASTNQGIESEKIPDF-KLPPKILCQ 79

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 126
           + +V + A+ +TDEVYAQ+TL+P   + +  +  P  +  P+KQ  + F K LTASDTST
Sbjct: 80  VLSVMLKAEHDTDEVYAQITLKPEEDQSEPTSLDP-PIVEPTKQMFHSFVKILTASDTST 138

Query: 127 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 186
           HGGFSV R+ A +  P+LD +   P QEL+ RDLH  EW+F+HIFRGQP+RHLLTTGWS 
Sbjct: 139 HGGFSVLRKHATECLPALDMTQAIPTQELVTRDLHGFEWRFKHIFRGQPRRHLLTTGWST 198

Query: 187 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 246
           FVS+KRLVAGD+ +F+  E   L +G+RR  R    MP+SV+SS SMH+G+LA A+HA  
Sbjct: 199 FVSSKRLVAGDAFVFLRGENGDLRVGVRRLARHQNTMPASVISSQSMHLGVLATASHAVN 258

Query: 247 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 306
           T + F VF+ PR   S+F++ + KY++A+ H   S+G RFRM FE EES  R + GTI G
Sbjct: 259 TQTMFLVFYKPRI--SQFIVSVNKYMEAMKHG-FSLGTRFRMRFEGEESPERIFTGTIVG 315

Query: 307 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRP 364
           I DL   +W  S WRS++V WDE T  +R  +VS WEIEP    P  P+  P +  +P
Sbjct: 316 IGDLS-SQWPASTWRSLQVQWDEPTTVQRPDKVSPWEIEPF--LPSSPASTPSQQSQP 370



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 678 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           +RT  KV   G +VGR++D++   SY+EL +EL +MF I+G+     R  W +VF D E 
Sbjct: 454 SRTRTKVQMQGIAVGRAVDLTLLKSYDELIKELEEMFEIQGQLLP--RDKWIVVFTDDEG 511

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPED 763
           D++L GDDPW  F      I I S ++
Sbjct: 512 DMMLAGDDPWNEFCKMAKKIFIYSSDE 538


>gi|291196869|emb|CAX63117.1| ETTIN protein [Amborella trichopoda]
          Length = 840

 Score =  359 bits (922), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 193/375 (51%), Positives = 247/375 (65%), Gaps = 38/375 (10%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
           CL  E+W ACAG L+SLP  G+ VVYF QGH EQ  A+ +            LPPQ+ C+
Sbjct: 27  CL--EVWQACAGSLISLPRKGSVVVYFXQGHLEQAGASCDGW---------GLPPQVFCR 75

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP---------------SKQP 111
           + NV +HAD  +DEVYAQ++L P+ PE       P+E G+P               S+  
Sbjct: 76  VINVNLHADQVSDEVYAQVSLTPI-PE-------PVEKGLPEEEVREDGEEEFEFVSRSA 127

Query: 112 T-NYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHI 170
           T + FCKTLTASDTSTHGGFSVPRRAAE  FP LD+  Q P+QEL+A+DLH  EWKFRHI
Sbjct: 128 TPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGFEWKFRHI 187

Query: 171 FRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRP-PTVMPSSVLS 229
           +RGQP+RHLLTTGWSVFV+ K+LVAGD+VLF+  E  +L LGIRRA RP    +PS  L 
Sbjct: 188 YRGQPRRHLLTTGWSVFVNQKKLVAGDAVLFLRGESGELRLGIRRAGRPRGGSVPSLALL 247

Query: 230 SDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRML 289
           S ++     AA + A +T S F V +NPRASP+EF++P  KY K  F+ + S+GMRF+M 
Sbjct: 248 SQNLSGSTFAAVSKAVSTKSVFHVSYNPRASPAEFIVPYWKYYKN-FNQQFSLGMRFKMK 306

Query: 290 FETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT 349
            ETE+++ RR  G I+G+ D+DPVRW  S WR + V WDE +  +R  RVS WEI+ L +
Sbjct: 307 IETEDTAERRCTGLISGVGDIDPVRWPGSKWRCLMVRWDEDSGNDRLDRVSPWEIDLLGS 366

Query: 350 FPMYPSLFPLRLKRP 364
            P++ S     LKRP
Sbjct: 367 VPVF-SPPATGLKRP 380



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 40/93 (43%), Positives = 66/93 (70%), Gaps = 2/93 (2%)

Query: 676 TPTRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDR 734
           T  R+  KV+K GS VGR++++S+F  Y++L  EL ++F +EG   DP + GWQ+V+ D 
Sbjct: 699 TANRSCTKVHKQGSMVGRAINLSKFEGYDDLISELERLFNMEGLLNDP-KKGWQVVYTDS 757

Query: 735 ENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           ++D++L+GDDPW+ F + V  I I + ++V+KM
Sbjct: 758 DDDMMLVGDDPWQEFCNIVSKILIYTHDEVEKM 790


>gi|379323234|gb|AFD01316.1| auxin response factor 18-2 [Brassica rapa subsp. pekinensis]
          Length = 555

 Score =  359 bits (921), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 181/348 (52%), Positives = 242/348 (69%), Gaps = 7/348 (2%)

Query: 5   NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSH-IPNYPNLPPQL 63
           N  L +ELW ACAGPLV +P  G +V YFPQGH EQ+ A+TN+ ++S  IP++  LPP++
Sbjct: 18  NDELYTELWKACAGPLVEVPLAGEKVFYFPQGHMEQLVASTNQGIESEEIPDF-KLPPKI 76

Query: 64  ICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASD 123
           +C++ +V + A+ +TDEVYAQ+TL+P   + +  +  P  L  P+KQ  + F K LTASD
Sbjct: 77  LCRVLSVMLKAEHDTDEVYAQITLKPEEDQSELTSLDP-PLVEPTKQMFHSFVKILTASD 135

Query: 124 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 183
           TSTHGGFSV R+ A +  P+LD     P QEL+ RDLH  EW+F+HIFRGQP+RHLLTTG
Sbjct: 136 TSTHGGFSVLRKHATECLPALDMGQATPTQELVTRDLHGFEWRFKHIFRGQPRRHLLTTG 195

Query: 184 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAH 243
           WS FVS+KRLVAGD+ +F+  E   L +G+RR  R  + MP+SV+SS SMH+G+LA A+H
Sbjct: 196 WSTFVSSKRLVAGDAFVFLRGENGDLRVGVRRLARHQSTMPTSVISSQSMHLGVLATASH 255

Query: 244 AAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGT 303
           A  T + F VF+ PR   S+F++ + KY++A+ H   S+G RFRM FE EES  R + GT
Sbjct: 256 AVVTKTIFLVFYKPRI--SQFIVGVNKYMEAMKHG-FSLGTRFRMRFEGEESPERMFTGT 312

Query: 304 ITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 351
           I GI DL   +W  S WRS++V WDE T  +R  RVS WEIEP  + P
Sbjct: 313 IVGIGDLSS-QWPASTWRSLQVQWDEPTTFQRPDRVSPWEIEPFLSSP 359



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 40/90 (44%), Positives = 55/90 (61%), Gaps = 3/90 (3%)

Query: 679 RTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 737
           RT  KV   G +VGR++D++   SYNEL +EL +MF I+G+     R  W +VF D E D
Sbjct: 451 RTRTKVIMQGVAVGRAVDLTLLKSYNELIKELEEMFEIKGQLLT--REKWVVVFTDDEGD 508

Query: 738 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           ++L GDDPW  F      I I S ++V+KM
Sbjct: 509 MMLAGDDPWNEFCKMAKKIFIYSSDEVKKM 538


>gi|356560266|ref|XP_003548414.1| PREDICTED: auxin response factor 7-like [Glycine max]
          Length = 799

 Score =  359 bits (921), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 181/353 (51%), Positives = 241/353 (68%), Gaps = 12/353 (3%)

Query: 2   IGDNKCLNS-----ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNY 56
           IGD  CL       ELW  CAGPLV +P  G RV YFPQGH EQ+ A+T++E++  IP++
Sbjct: 102 IGDG-CLKDDDLYRELWKLCAGPLVDVPRTGDRVFYFPQGHMEQLQASTDQELNQEIPHF 160

Query: 57  PNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFC 116
            NLP ++ C++ N+ + A+ +TDEVYA + L P S + +     P  +  P KQ  + FC
Sbjct: 161 -NLPAKIFCRVVNIQLLAEQDTDEVYACIALLPESDQTEPTNPDP-NISEPPKQKFHSFC 218

Query: 117 KTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPK 176
           K LTASDTSTHGGFSV R+ A +  P+LD +   P QEL A+DLH  EWKF+HI+RGQP+
Sbjct: 219 KILTASDTSTHGGFSVLRKHATECLPALDMTQATPTQELAAKDLHGFEWKFKHIYRGQPR 278

Query: 177 RHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIG 236
           RHLLTTGWS FV++KRLVAGD+ +F+  E  QL +G+RR  R  + MPSSV+SS SMH+G
Sbjct: 279 RHLLTTGWSTFVASKRLVAGDAFVFLRGEHGQLRVGVRRLARQQSPMPSSVISSQSMHLG 338

Query: 237 LLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS 296
           +LA A+HA  T + F V++ PR   S+F++ L KY++AV + + S+GMRF+M FE ++S 
Sbjct: 339 VLATASHAVMTRTMFLVYYKPRT--SQFIVGLNKYLEAV-NNKFSLGMRFKMRFEGDDSP 395

Query: 297 VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT 349
            RR+ GTI G+ D+    WSNS WRS+KV WDE     R  RVS WEIEP   
Sbjct: 396 ERRFSGTIVGVGDVS-AGWSNSQWRSLKVQWDEPATIPRPDRVSCWEIEPFVA 447



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 39/90 (43%), Positives = 56/90 (62%), Gaps = 3/90 (3%)

Query: 679 RTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 737
           RT  KV   G +VGR+ D++  S Y++L EEL ++F I G+     +  W + F D END
Sbjct: 679 RTRTKVQMQGVAVGRAFDLTTLSGYDDLIEELEKLFEIRGELHS--QDKWAVTFTDDEND 736

Query: 738 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           ++L+GDDPW  F + V  I I S ED++KM
Sbjct: 737 MMLVGDDPWPEFCNMVKRIFICSREDLKKM 766


>gi|297740441|emb|CBI30623.3| unnamed protein product [Vitis vinifera]
          Length = 701

 Score =  358 bits (920), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 187/353 (52%), Positives = 237/353 (67%), Gaps = 31/353 (8%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYP----NLPPQ 62
           CL  ELWHACAGPL+SLP  G+ VVYFPQGH EQ++            +YP    +LPP 
Sbjct: 44  CL--ELWHACAGPLISLPKKGSLVVYFPQGHLEQLS------------DYPAVAYDLPPH 89

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQK----------DTFVPIELGIPSKQPT 112
           + C++ +V +HA+V TDEVYAQ++L P +  +QK               IE  I S  P 
Sbjct: 90  VFCRVVDVKLHAEVVTDEVYAQVSLVPETKIKQKLQEGEIEADGGEEEDIEGSIKSMTP- 148

Query: 113 NYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFR 172
           + FCKTLTASDTSTHGGFSVPRRAAE  FP LD+  Q P+QEL+A+DLH  EW+FRHI+R
Sbjct: 149 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGFEWRFRHIYR 208

Query: 173 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDS 232
           GQP+RHLLTTGWS FV+ K+LV+GD+VLF+     +L LGIRRA +     P   L S  
Sbjct: 209 GQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGGDGELRLGIRRAAQIKGSSPFPALCSQQ 268

Query: 233 MHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFET 292
           +++  L A  +A +T S F + +NPRAS SEF+IPL K+ K++ H+  S GMRF+M  ET
Sbjct: 269 LNLNTLTAVVNAISTRSVFNICYNPRASSSEFIIPLRKFSKSIDHS-FSAGMRFKMRVET 327

Query: 293 EESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 345
           E+++ RRY G ITGISD+DPVRW  S WR + V WD+  A  R  RVS WEIE
Sbjct: 328 EDAAERRYTGLITGISDMDPVRWPGSKWRCLLVRWDDIEA-NRHNRVSPWEIE 379


>gi|379323222|gb|AFD01310.1| auxin response factor 11 [Brassica rapa subsp. pekinensis]
          Length = 584

 Score =  358 bits (919), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 191/373 (51%), Positives = 246/373 (65%), Gaps = 14/373 (3%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEV-DSHIPNYPNLPPQLICQ 66
           L  ELW ACAGPLV +P    RV YFPQGH EQ+ A+TN+ V D  IP + NLPP+++C+
Sbjct: 9   LYMELWKACAGPLVEVPRYDERVFYFPQGHMEQLVASTNQRVVDKDIPVF-NLPPKILCR 67

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 126
           + NV + A+ ETDEVYAQ+TLQP   + +  +  P  L  P+KQ  + F K LTASDTST
Sbjct: 68  VLNVMLKAEHETDEVYAQITLQPEEDQSEPTSLDP-PLTEPAKQTVDSFVKILTASDTST 126

Query: 127 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 186
           HGGFSV R+ A +  P LD +   P QEL+ARDLH  EW+F+HIFRGQP+RHLLTTGWS 
Sbjct: 127 HGGFSVLRKHATECLPPLDMTQATPTQELVARDLHGYEWRFKHIFRGQPRRHLLTTGWST 186

Query: 187 FVSAKRLVAGDSVLFIW-NEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 245
           FV++KRLVAGD+ +F+  ++   L +G+RR  +  + MP+SV+SS SMH+G+LA A+HA 
Sbjct: 187 FVTSKRLVAGDAFVFLRGHQTGDLRVGVRRLAKQQSTMPASVISSQSMHLGVLATASHAF 246

Query: 246 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 305
            T + F V + PR   S+F+I + KY+ A       +GMRFRM FE EES  R + GTI 
Sbjct: 247 NTTTMFVVLYKPRI--SQFIISVNKYM-AAMKKGFGIGMRFRMRFEGEESPERIFTGTIV 303

Query: 306 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEP-----LTTFPMYPSLFPLR 360
           G  DL P +W  S WRS++V WDES+  +R  +VS WEIEP     LTT P  P     R
Sbjct: 304 GTGDLSP-QWPASKWRSLQVQWDESSTVQRPNKVSPWEIEPFLPSTLTTSPTQPYSKSKR 362

Query: 361 LKRPWHPSTSSFN 373
             RP  PS S   
Sbjct: 363 -SRPIDPSVSEIT 374



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/103 (38%), Positives = 62/103 (60%), Gaps = 3/103 (2%)

Query: 671 QIDQLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQL 729
           Q  Q + TR+  KV   G+ VGR++D++   SY+EL  EL +MF IEG+     +  W +
Sbjct: 465 QKQQTSSTRSRTKVQMQGTAVGRAVDLTLLRSYDELIRELEKMFEIEGELR--TKDKWAI 522

Query: 730 VFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGV 772
           VF D E D++L+GDDPW+ F      + I S ++V+KM  + +
Sbjct: 523 VFTDDEGDMMLVGDDPWDEFCKMAKKLFIYSSDEVKKMSSKSL 565


>gi|356543436|ref|XP_003540166.1| PREDICTED: auxin response factor 4-like [Glycine max]
          Length = 793

 Score =  358 bits (918), Expect = 9e-96,   Method: Compositional matrix adjust.
 Identities = 184/364 (50%), Positives = 240/364 (65%), Gaps = 14/364 (3%)

Query: 11  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 70
           ELWHACAGPL SLP  G  VVYFPQGH EQ AA+ +      +P Y +L PQ+ C++ N+
Sbjct: 50  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQ-AASFSPFSPMEMPTY-DLQPQIFCRVVNI 107

Query: 71  TMHADVETDEVYAQMTLQPLSP-------EEQKDTFVPIELG---IPSKQPTNYFCKTLT 120
            + A+ E DEVY Q+TL P +         ++ +     E G    P+K   + FCKTLT
Sbjct: 108 QLLANKENDEVYTQVTLLPQAELAGMYMEGKELEKLGADEEGNETTPTKSTPHMFCKTLT 167

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
           ASDTSTHGGFSVPRRAAE  FP LD+  Q P+QEL+A+DLH VEWKFRHI+RGQP+RHLL
Sbjct: 168 ASDTSTHGGFSVPRRAAEDCFPPLDYKKQRPSQELVAKDLHGVEWKFRHIYRGQPRRHLL 227

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 240
           TTGWS+FVS K LV+GD+VLF+  E  +L LGIRRA RP   +P S++ S S +   L++
Sbjct: 228 TTGWSIFVSQKNLVSGDAVLFLRGENGELRLGIRRAARPRNGLPESIVGSQSYYPNFLSS 287

Query: 241 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 300
            A+A +  S F VF++PRAS ++F +P  KY+K++    V++G RF+M FE +ES  RR 
Sbjct: 288 VANAISAKSMFHVFYSPRASHADFAVPYQKYIKSI-KNPVTIGTRFKMKFEMDESPERRC 346

Query: 301 M-GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL 359
             G +TG+SDLDP +W  S WR + V WDE      Q RVS WE++P  + P        
Sbjct: 347 TSGIVTGMSDLDPYKWPKSKWRCLMVRWDEDIEINHQDRVSPWEVDPSASLPPLSIQSSR 406

Query: 360 RLKR 363
           RLK+
Sbjct: 407 RLKK 410



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 44/95 (46%), Positives = 65/95 (68%), Gaps = 2/95 (2%)

Query: 674 QLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFV 732
           Q +  R+  KV+K GS VGR++D+SR SSYN+L  EL ++F +EG   DP   GW++++ 
Sbjct: 659 QNSSKRSCTKVHKQGSLVGRAIDLSRLSSYNDLLIELERLFSMEGLLIDP-NKGWRILYT 717

Query: 733 DRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           D END++++GDDPW  F   V  I I + E+V+KM
Sbjct: 718 DSENDIMVVGDDPWHEFCDVVSKIHIHTQEEVEKM 752


>gi|359483904|ref|XP_002273401.2| PREDICTED: auxin response factor 3-like [Vitis vinifera]
          Length = 740

 Score =  358 bits (918), Expect = 9e-96,   Method: Compositional matrix adjust.
 Identities = 187/358 (52%), Positives = 239/358 (66%), Gaps = 40/358 (11%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYP----NLPPQ 62
           CL  ELWHACAGPL+SLP  G+ VVYFPQGH EQ++            +YP    +LPP 
Sbjct: 47  CL--ELWHACAGPLISLPKKGSLVVYFPQGHLEQLS------------DYPAVAYDLPPH 92

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPE---------------EQKDTFVPIELGIP 107
           + C++ +V +HA+V TDEVYAQ++L P + +               E++D    IE  I 
Sbjct: 93  VFCRVVDVKLHAEVVTDEVYAQVSLVPETKQIKQKLQEGEIEADGGEEED----IEGSIK 148

Query: 108 SKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKF 167
           S  P + FCKTLTASDTSTHGGFSVPRRAAE  FP LD+  Q P+QEL+A+DLH  EW+F
Sbjct: 149 SMTP-HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGFEWRF 207

Query: 168 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSV 227
           RHI+RGQP+RHLLTTGWS FV+ K+LV+GD+VLF+     +L LGIRRA +     P   
Sbjct: 208 RHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGGDGELRLGIRRAAQIKGSSPFPA 267

Query: 228 LSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFR 287
           L S  +++  L A  +A +T S F + +NPRAS SEF+IPL K+ K++ H+  S GMRF+
Sbjct: 268 LCSQQLNLNTLTAVVNAISTRSVFNICYNPRASSSEFIIPLRKFSKSIDHS-FSAGMRFK 326

Query: 288 MLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 345
           M  ETE+++ RRY G ITGISD+DPVRW  S WR + V WD+  A  R  RVS WEIE
Sbjct: 327 MRVETEDAAERRYTGLITGISDMDPVRWPGSKWRCLLVRWDDIEA-NRHNRVSPWEIE 383


>gi|302398561|gb|ADL36575.1| ARF domain class transcription factor [Malus x domestica]
          Length = 695

 Score =  357 bits (916), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 188/380 (49%), Positives = 252/380 (66%), Gaps = 19/380 (5%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           GD+  L +ELW  CAGPLV +P  G +V YFPQGH EQ+ ++TN+E++  IP + NLP +
Sbjct: 19  GDD--LYTELWKLCAGPLVDVPRPGEKVYYFPQGHMEQLESSTNQELNQQIPLF-NLPSK 75

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           ++C + ++ + A+ ETDEVYAQ+TL P + + +  +  P +   P K   ++FCK LTAS
Sbjct: 76  ILCSVVHIRLLAEQETDEVYAQITLHPEADQCEPSSPDPCKPEAP-KATVHWFCKILTAS 134

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSV R+ A +  P LD +   P QELIA+DLH  EWKF+HIFRGQP+RHLLTT
Sbjct: 135 DTSTHGGFSVLRKHATECLPPLDMNQATPTQELIAKDLHGYEWKFKHIFRGQPRRHLLTT 194

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWS FV++KRLVAGD+ +F+  +  +L  G+RR  R  + +PSSV+SS SMH+G+LA A+
Sbjct: 195 GWSTFVTSKRLVAGDAFVFLRGDNGELRAGVRRLARQQSQIPSSVISSQSMHLGVLATAS 254

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 302
           HA  T + F V+  PR   S+F+I L+KY++A   T+ S+G RFRM FE +ES  RR+ G
Sbjct: 255 HALMTKTLFVVYSKPRT--SQFIIGLSKYLEAT-KTKFSLGTRFRMRFEGDESPERRFTG 311

Query: 303 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTF-------PMYPS 355
           TI  + DL P +WS S WRS+KV WDE  A +R  RVS W+IEP           PM  S
Sbjct: 312 TIVEVGDLSP-QWSESKWRSLKVQWDEHAAVQRPDRVSPWDIEPFVASAPSNLAQPMVKS 370

Query: 356 LFPLRLKRPWHPSTSSFNDN 375
             P    RP   S+S    N
Sbjct: 371 KRP----RPVEISSSEVTTN 386



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 41/100 (41%), Positives = 61/100 (61%), Gaps = 3/100 (3%)

Query: 678 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           TRT  KV   G +VGR++D++    Y+ L +EL +MF I+G+     ++ W +VF D EN
Sbjct: 579 TRTRTKVQMQGVAVGRAVDLTALKGYDHLIDELEKMFEIKGELRP--KNKWAVVFTDDEN 636

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFS 776
           D++L+GDD W  F   V  I I S ++VQKM    ++S S
Sbjct: 637 DMMLMGDDQWPDFCKLVKKIFIYSSDEVQKMNRCKLQSSS 676


>gi|42569975|ref|NP_182176.2| auxin response factor 11 [Arabidopsis thaliana]
 gi|110739686|dbj|BAF01750.1| ARF1 family auxin responsive transcription factor like protein
           [Arabidopsis thaliana]
 gi|330255620|gb|AEC10714.1| auxin response factor 11 [Arabidopsis thaliana]
          Length = 601

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 180/349 (51%), Positives = 242/349 (69%), Gaps = 7/349 (2%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNK-EVDSHIPNYPNLPPQLICQ 66
           L +ELW ACAGPLV +P  G RV YFPQGH EQ+ A+TN+  VD  IP + NLPP+++C+
Sbjct: 18  LYTELWKACAGPLVEVPRYGERVFYFPQGHMEQLVASTNQGVVDQEIPVF-NLPPKILCR 76

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 126
           + +VT+ A+ ETDEVYAQ+TLQP   + +  +  P  L  P+K   + F K LTASDTST
Sbjct: 77  VLSVTLKAEHETDEVYAQITLQPEEDQSEPTSLDP-PLVEPAKPTVDSFVKILTASDTST 135

Query: 127 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 186
           HGGFSV R+ A +  PSLD +   P QEL+ARDLH  EW+F+HIFRGQP+RHLLTTGWS 
Sbjct: 136 HGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRGQPRRHLLTTGWST 195

Query: 187 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 246
           FV++KRLVAGD+ +F+  E   L +G+RR  +  + MP+SV+SS SM +G+LA A+HA  
Sbjct: 196 FVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMPASVISSQSMRLGVLATASHAVT 255

Query: 247 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 306
           T + F VF+ PR   S+F+I + KY+ A+     S+GMR+RM FE EES  R + GTI G
Sbjct: 256 TTTIFVVFYKPRI--SQFIISVNKYMMAM-KNGFSLGMRYRMRFEGEESPERIFTGTIIG 312

Query: 307 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS 355
             DL   +W  S WRS+++ WDE ++ +R  +VS WEIEP +   + P+
Sbjct: 313 SGDLSS-QWPASKWRSLQIQWDEPSSIQRPNKVSPWEIEPFSPSALTPT 360



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 44/121 (36%), Positives = 68/121 (56%), Gaps = 5/121 (4%)

Query: 648 DSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELR 706
           DS   +S   C   +S   ++  +  Q T TR+ +KV   G+ VGR++D++   SY+EL 
Sbjct: 461 DSNISDSTTKCQDPNSS--NSPKEQKQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDELI 518

Query: 707 EELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQK 766
           +EL +MF IEG+     +  W +VF D E D +L+GDDPW  F      + I   ++V+K
Sbjct: 519 KELEKMFEIEGELSP--KDKWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVKK 576

Query: 767 M 767
           M
Sbjct: 577 M 577


>gi|297742361|emb|CBI34510.3| unnamed protein product [Vitis vinifera]
          Length = 682

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 179/344 (52%), Positives = 240/344 (69%), Gaps = 8/344 (2%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+   L +ELW ACAGPLV +P  G RV YFPQGH EQ+ A+TN+E+   IP + NLP +
Sbjct: 7   GEGDDLYAELWKACAGPLVDVPRRGERVFYFPQGHVEQLEASTNQELSQRIPLF-NLPSK 65

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNY-FCKTLTA 121
           ++C++ ++ + A+ ETDEVYAQ+TL P   + +  +  P     P  +PT + FCK LTA
Sbjct: 66  ILCRVIHIQLRAEQETDEVYAQITLLPEPDQAEPRSPDPCTPEPP--RPTVHSFCKVLTA 123

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSV R+ A +  P LD +   P QEL+A+DLH  EW+F+HIFRGQP+RHLLT
Sbjct: 124 SDTSTHGGFSVLRKHANECLPQLDMNQATPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT 183

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWS FV++KRLVAGDS +F+  +  +L +G+RR  R  + MP+SV+SS SMH+G+LA A
Sbjct: 184 TGWSTFVTSKRLVAGDSFVFLRGDNGELRVGVRRLARQQSTMPTSVISSQSMHLGVLATA 243

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           +HA AT + F V++ PR   S+F+I L KY++AV +   +VGMRF+M FE E+S  RR+ 
Sbjct: 244 SHAVATQTLFIVYYKPRT--SQFIIGLNKYLEAVSNG-FAVGMRFKMRFEGEDSPERRFS 300

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 345
           GTI G  D  P  W +S WRS+KV WDE  +  R  +VS WEIE
Sbjct: 301 GTIVGGEDFSP-EWKDSEWRSLKVQWDEPASIPRPEKVSPWEIE 343



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 59/91 (64%), Gaps = 3/91 (3%)

Query: 678 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           TR+  KV   G +VGR++D++    Y+EL +EL +MF I+G+     R  W++VF D E 
Sbjct: 569 TRSRTKVQMQGIAVGRAVDLTALEGYDELIDELEEMFEIKGELRP--RYKWEIVFTDDEG 626

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           D++L+GDDPW  F + V  I I S +DV+KM
Sbjct: 627 DMMLVGDDPWPEFCNMVRRIFICSSQDVKKM 657


>gi|79324927|ref|NP_001031548.1| auxin response factor 11 [Arabidopsis thaliana]
 gi|238054388|sp|Q9ZPY6.3|ARFK_ARATH RecName: Full=Auxin response factor 11
 gi|4415934|gb|AAD20164.1| putative ARF1 family auxin responsive transcription factor
           [Arabidopsis thaliana]
 gi|20197827|gb|AAM15267.1| putative ARF1 family auxin responsive transcription factor
           [Arabidopsis thaliana]
 gi|49616357|gb|AAT67075.1| ARF11 [Arabidopsis thaliana]
 gi|330255622|gb|AEC10716.1| auxin response factor 11 [Arabidopsis thaliana]
          Length = 622

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 180/349 (51%), Positives = 242/349 (69%), Gaps = 7/349 (2%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNK-EVDSHIPNYPNLPPQLICQ 66
           L +ELW ACAGPLV +P  G RV YFPQGH EQ+ A+TN+  VD  IP + NLPP+++C+
Sbjct: 39  LYTELWKACAGPLVEVPRYGERVFYFPQGHMEQLVASTNQGVVDQEIPVF-NLPPKILCR 97

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 126
           + +VT+ A+ ETDEVYAQ+TLQP   + +  +  P  L  P+K   + F K LTASDTST
Sbjct: 98  VLSVTLKAEHETDEVYAQITLQPEEDQSEPTSLDP-PLVEPAKPTVDSFVKILTASDTST 156

Query: 127 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 186
           HGGFSV R+ A +  PSLD +   P QEL+ARDLH  EW+F+HIFRGQP+RHLLTTGWS 
Sbjct: 157 HGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRGQPRRHLLTTGWST 216

Query: 187 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 246
           FV++KRLVAGD+ +F+  E   L +G+RR  +  + MP+SV+SS SM +G+LA A+HA  
Sbjct: 217 FVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMPASVISSQSMRLGVLATASHAVT 276

Query: 247 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 306
           T + F VF+ PR   S+F+I + KY+ A+     S+GMR+RM FE EES  R + GTI G
Sbjct: 277 TTTIFVVFYKPRI--SQFIISVNKYMMAM-KNGFSLGMRYRMRFEGEESPERIFTGTIIG 333

Query: 307 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS 355
             DL   +W  S WRS+++ WDE ++ +R  +VS WEIEP +   + P+
Sbjct: 334 SGDLSS-QWPASKWRSLQIQWDEPSSIQRPNKVSPWEIEPFSPSALTPT 381



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 44/121 (36%), Positives = 68/121 (56%), Gaps = 5/121 (4%)

Query: 648 DSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELR 706
           DS   +S   C   +S   ++  +  Q T TR+ +KV   G+ VGR++D++   SY+EL 
Sbjct: 482 DSNISDSTTKCQDPNSS--NSPKEQKQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDELI 539

Query: 707 EELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQK 766
           +EL +MF IEG+     +  W +VF D E D +L+GDDPW  F      + I   ++V+K
Sbjct: 540 KELEKMFEIEGELSP--KDKWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVKK 597

Query: 767 M 767
           M
Sbjct: 598 M 598


>gi|110739362|dbj|BAF01593.1| ARF1 family auxin responsive transcription factor like protein
           [Arabidopsis thaliana]
          Length = 601

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 180/349 (51%), Positives = 242/349 (69%), Gaps = 7/349 (2%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNK-EVDSHIPNYPNLPPQLICQ 66
           L +ELW ACAGPLV +P  G RV YFPQGH EQ+ A+TN+  VD  IP + NLPP+++C+
Sbjct: 18  LYTELWKACAGPLVEVPRYGERVFYFPQGHMEQLVASTNQGVVDQEIPVF-NLPPKILCR 76

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 126
           + +VT+ A+ ETDEVYAQ+TLQP   + +  +  P  L  P+K   + F K LTASDTST
Sbjct: 77  VLSVTLKAEHETDEVYAQITLQPEEDQSEPTSLDP-PLVEPAKPAVDSFVKILTASDTST 135

Query: 127 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 186
           HGGFSV R+ A +  PSLD +   P QEL+ARDLH  EW+F+HIFRGQP+RHLLTTGWS 
Sbjct: 136 HGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRGQPRRHLLTTGWST 195

Query: 187 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 246
           FV++KRLVAGD+ +F+  E   L +G+RR  +  + MP+SV+SS SM +G+LA A+HA  
Sbjct: 196 FVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMPASVISSQSMRLGVLATASHAVT 255

Query: 247 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 306
           T + F VF+ PR   S+F+I + KY+ A+     S+GMR+RM FE EES  R + GTI G
Sbjct: 256 TTTIFVVFYKPRI--SQFIISVNKYMMAM-KNGFSLGMRYRMRFEGEESPERIFTGTIIG 312

Query: 307 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS 355
             DL   +W  S WRS+++ WDE ++ +R  +VS WEIEP +   + P+
Sbjct: 313 SGDLSS-QWPASKWRSLQIQWDEPSSIQRPNKVSPWEIEPFSPSALTPT 360



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 44/121 (36%), Positives = 68/121 (56%), Gaps = 5/121 (4%)

Query: 648 DSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELR 706
           DS   +S   C   +S   ++  +  Q T TR+ +KV   G+ VGR++D++   SY+EL 
Sbjct: 461 DSNISDSTTKCHDPNSS--NSPKEQKQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDELI 518

Query: 707 EELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQK 766
           +EL +MF IEG+     +  W +VF D E D +L+GDDPW  F      + I   ++V+K
Sbjct: 519 KELEKMFEIEGELSP--KDKWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVKK 576

Query: 767 M 767
           M
Sbjct: 577 M 577


>gi|359473930|ref|XP_002265162.2| PREDICTED: auxin response factor 9-like [Vitis vinifera]
          Length = 693

 Score =  356 bits (914), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 179/344 (52%), Positives = 240/344 (69%), Gaps = 8/344 (2%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+   L +ELW ACAGPLV +P  G RV YFPQGH EQ+ A+TN+E+   IP + NLP +
Sbjct: 7   GEGDDLYAELWKACAGPLVDVPRRGERVFYFPQGHVEQLEASTNQELSQRIPLF-NLPSK 65

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNY-FCKTLTA 121
           ++C++ ++ + A+ ETDEVYAQ+TL P   + +  +  P     P  +PT + FCK LTA
Sbjct: 66  ILCRVIHIQLRAEQETDEVYAQITLLPEPDQAEPRSPDPCTPEPP--RPTVHSFCKVLTA 123

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSV R+ A +  P LD +   P QEL+A+DLH  EW+F+HIFRGQP+RHLLT
Sbjct: 124 SDTSTHGGFSVLRKHANECLPQLDMNQATPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT 183

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWS FV++KRLVAGDS +F+  +  +L +G+RR  R  + MP+SV+SS SMH+G+LA A
Sbjct: 184 TGWSTFVTSKRLVAGDSFVFLRGDNGELRVGVRRLARQQSTMPTSVISSQSMHLGVLATA 243

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           +HA AT + F V++ PR   S+F+I L KY++AV +   +VGMRF+M FE E+S  RR+ 
Sbjct: 244 SHAVATQTLFIVYYKPRT--SQFIIGLNKYLEAVSNG-FAVGMRFKMRFEGEDSPERRFS 300

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 345
           GTI G  D  P  W +S WRS+KV WDE  +  R  +VS WEIE
Sbjct: 301 GTIVGGEDFSP-EWKDSEWRSLKVQWDEPASIPRPEKVSPWEIE 343



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 59/91 (64%), Gaps = 3/91 (3%)

Query: 678 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           TR+  KV   G +VGR++D++    Y+EL +EL +MF I+G+     R  W++VF D E 
Sbjct: 580 TRSRTKVQMQGIAVGRAVDLTALEGYDELIDELEEMFEIKGELRP--RYKWEIVFTDDEG 637

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           D++L+GDDPW  F + V  I I S +DV+KM
Sbjct: 638 DMMLVGDDPWPEFCNMVRRIFICSSQDVKKM 668


>gi|224104665|ref|XP_002313521.1| predicted protein [Populus trichocarpa]
 gi|222849929|gb|EEE87476.1| predicted protein [Populus trichocarpa]
          Length = 713

 Score =  356 bits (913), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 185/357 (51%), Positives = 241/357 (67%), Gaps = 25/357 (7%)

Query: 11  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSH--IPNYPNLPPQLICQLH 68
           ELWHACAGPL SLP  G  VVYFPQGH EQ+A+++     SH  +PN+ +L PQ+ C++ 
Sbjct: 41  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQLASSSPF---SHRDMPNF-DLHPQIFCKVV 96

Query: 69  NVTMHADVETDEVYAQMTLQPLSPE------EQKDTFVPIELGI--------PSKQPTNY 114
           NV + A+ E DEVY ++TL P  PE      E K+     ELG+        P+K   + 
Sbjct: 97  NVQLLANRENDEVYTRLTLLP-QPEVVGQDLEGKEL---QELGVDGEGDDASPTKSTPHM 152

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           FCKTLTASDTSTHGGFSVPRRAAE  FPSLD+  Q P+QEL+A+DLH VEW+FRHI+RGQ
Sbjct: 153 FCKTLTASDTSTHGGFSVPRRAAEDCFPSLDYKQQRPSQELLAKDLHGVEWRFRHIYRGQ 212

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMH 234
           P+RHLLTTGWS+FVS K LV+GD+VLF+  E  +L LGIRRA RP   +P SV    +  
Sbjct: 213 PRRHLLTTGWSIFVSQKNLVSGDAVLFLRGEGGELRLGIRRAARPRNGLPDSVTGKQNSL 272

Query: 235 IGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEE 294
              L+  ++A +T S FTV ++PRA+ + FV+P  KY+K++ +  V +G RF+M FE ++
Sbjct: 273 PSALSLVSNAISTKSVFTVSYSPRATHAVFVVPYQKYIKSITNA-VCIGTRFKMRFEMDD 331

Query: 295 SSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 351
           S  RR  G +TG +DLDP +W NS WR + V WDE    + Q RVS WEI+   + P
Sbjct: 332 SPERRCSGVVTGTADLDPYKWPNSKWRCLMVRWDEDVISDHQERVSPWEIDASVSLP 388



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 46/121 (38%), Positives = 71/121 (58%), Gaps = 2/121 (1%)

Query: 648 DSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELR 706
           D  F+ +  GC      L        Q T  R+  KV+K GS VGR++D+SR + Y++L 
Sbjct: 564 DDFFNGNATGCKLFGFSLNAETSPNSQNTSKRSCTKVHKQGSLVGRAIDLSRLNGYSDLL 623

Query: 707 EELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQK 766
            EL ++F +EG   +P   GW++++ D ENDV+++GDDPW  F +    I I + E+V+K
Sbjct: 624 NELERLFSMEGLLRNP-EEGWRILYTDSENDVMVVGDDPWLEFCNVATKIHIYTQEEVEK 682

Query: 767 M 767
           M
Sbjct: 683 M 683


>gi|350539990|ref|NP_001234602.1| auxin response factor 12 [Solanum lycopersicum]
 gi|310697410|gb|ADP06660.1| auxin response factor 12 [Solanum lycopersicum]
          Length = 405

 Score =  356 bits (913), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 179/359 (49%), Positives = 244/359 (67%), Gaps = 6/359 (1%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           L  ELW  CAGPLV +P    RV YFPQGH EQ+ A+TN+E++  IP + NL P+++C++
Sbjct: 28  LCQELWRLCAGPLVDVPKNEERVYYFPQGHMEQLEASTNQELNQSIPLF-NLQPKILCRV 86

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTH 127
            ++ + A+ ++DEVYAQ+ L P   ++ + T   + L  P +   ++FCK LTASDTSTH
Sbjct: 87  LHIQLLAEQDSDEVYAQIALLP-EADQVEPTSPDLSLPEPPRPKVHFFCKVLTASDTSTH 145

Query: 128 GGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 187
           GGFS+ R+ A +  P LD +   PAQEL+A+DLH  EW F+HIFRGQP+RHLLTTGWS F
Sbjct: 146 GGFSILRKHANECLPPLDMTQATPAQELVAKDLHGFEWHFKHIFRGQPRRHLLTTGWSTF 205

Query: 188 VSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAAT 247
           VS+KRLV GDS +F+ + K ++ +GIRR  R P+ MP SV+SS SMH+G+LA A+HA  T
Sbjct: 206 VSSKRLVTGDSFVFLRSGKGEVRIGIRRLARQPSSMPQSVISSQSMHLGVLATASHAVTT 265

Query: 248 NSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGI 307
            + F V++ PR   S+F+I L KY++AV H R SVGMRF+M FE EE   +R+ GTI G+
Sbjct: 266 QTMFVVYYKPRT--SQFIIGLNKYLEAVKH-RYSVGMRFKMKFEGEEIPEKRFTGTIVGV 322

Query: 308 SDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWH 366
            D    +W +S WRS+KV WDE  +  R  RVS W+IEP       P + P+ +K   H
Sbjct: 323 ED-SSSQWKDSKWRSLKVQWDEPASVPRPDRVSPWDIEPFVASVATPLVPPMGVKNKRH 380


>gi|255562988|ref|XP_002522498.1| Auxin response factor, putative [Ricinus communis]
 gi|223538189|gb|EEF39798.1| Auxin response factor, putative [Ricinus communis]
          Length = 730

 Score =  355 bits (912), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 189/370 (51%), Positives = 239/370 (64%), Gaps = 29/370 (7%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYP----NLPPQ 62
           CL  ELWHACAGPL+SLP  G+ VVYFPQGH EQ            +P+ P    +LP  
Sbjct: 51  CL--ELWHACAGPLISLPKKGSVVVYFPQGHLEQ------------LPDLPLAVYDLPSY 96

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPE-EQKDTFVPIE--------LGIPSKQPTN 113
           + C++ +V +HA+   DEVYAQ++L P S + EQK     +E          +     T+
Sbjct: 97  IFCRVVDVKLHAETANDEVYAQVSLVPDSEQIEQKLKQGKLEGHCEEEDVEAVVKSTTTH 156

Query: 114 YFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRG 173
            FCKTLTASDTSTHGGFSVPRRAAE  FP LD+S Q P+QEL+A+DLH  EWKFRHI+RG
Sbjct: 157 MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGFEWKFRHIYRG 216

Query: 174 QPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSM 233
           QP+RHLLTTGWS FV+ K+LV+GD+VLF+  +  +L LGIRRA +         L S  +
Sbjct: 217 QPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGIRRAAQVKCGASFPALCSQQL 276

Query: 234 HIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETE 293
           +   L    HA +  S F + +NPRAS SEF+IPL K++K++ ++  SVGMRF+M FETE
Sbjct: 277 NQSTLTDVVHAMSMRSLFNICYNPRASSSEFIIPLHKFLKSLDYS-FSVGMRFKMRFETE 335

Query: 294 ESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMY 353
           +++ RRYMG ITGISDLDP RW  S WR + V WD+     R  RVS WEIEP  +    
Sbjct: 336 DAAERRYMGLITGISDLDPARWPGSKWRCLVVRWDDMET-NRHSRVSPWEIEPSGSVSSC 394

Query: 354 PSLFPLRLKR 363
            S     LKR
Sbjct: 395 NSFMTPGLKR 404


>gi|6850874|emb|CAB71113.1| auxin response factor-like protein [Arabidopsis thaliana]
          Length = 613

 Score =  355 bits (911), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 190/381 (49%), Positives = 253/381 (66%), Gaps = 23/381 (6%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSH-IPNYPNLPPQLICQ 66
           L +ELW  CAGPLV +P    RV YFPQGH EQ+ A+TN+ ++S  IP + +LPP+++C+
Sbjct: 22  LYTELWKVCAGPLVEVPRAQERVFYFPQGHMEQLVASTNQGINSEEIPVF-DLPPKILCR 80

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 126
           + +VT+ A+ ETDEVYAQ+TLQP   + +  +  P  +G P+KQ  + F K LTASDTST
Sbjct: 81  VLDVTLKAEHETDEVYAQITLQPEEDQSEPTSLDPPIVG-PTKQEFHSFVKILTASDTST 139

Query: 127 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 186
           HGGFSV R+ A +  PSLD +   P QEL+ RDLH  EW+F+HIFRGQP+RHLLTTGWS 
Sbjct: 140 HGGFSVLRKHATECLPSLDMTQATPTQELVTRDLHGFEWRFKHIFRGQPRRHLLTTGWST 199

Query: 187 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 246
           FVS+KRLVAGD+ +F+  E   L +G+RR  R  + MP+SV+SS SMH+G+LA A+HA  
Sbjct: 200 FVSSKRLVAGDAFVFLRGENGDLRVGVRRLARHQSTMPTSVISSQSMHLGVLATASHAVR 259

Query: 247 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVR-------- 298
           T + F VF+ PR   S+F++ + KY++A+ H   S+G RFRM FE EES  R        
Sbjct: 260 TTTIFVVFYKPRI--SQFIVGVNKYMEAIKHG-FSLGTRFRMRFEGEESPERIVLDSETW 316

Query: 299 ---RYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPM-Y 353
              R+ GTI G  DL   +W  S WRS++V WDE T  +R  +VS WEIEP L T P+  
Sbjct: 317 NVFRFTGTIVGSGDLS-SQWPASKWRSLQVQWDEPTTVQRPDKVSPWEIEPFLATSPIST 375

Query: 354 PSLFP---LRLKRPWHPSTSS 371
           P+  P    +  RP  PS  +
Sbjct: 376 PAQQPQSKCKRSRPIEPSVKT 396



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 3/91 (3%)

Query: 678 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           +R+  KV   G +VGR++D++   SY+EL +EL +MF I+G+     R  W +VF D E 
Sbjct: 499 SRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQGQLL--ARDKWIVVFTDDEG 556

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           D++L GDDPW  F      I I S ++V+KM
Sbjct: 557 DMMLAGDDPWNEFCKMAKKIFIYSSDEVKKM 587


>gi|312283167|dbj|BAJ34449.1| unnamed protein product [Thellungiella halophila]
          Length = 559

 Score =  355 bits (911), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 180/349 (51%), Positives = 237/349 (67%), Gaps = 7/349 (2%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNK-EVDSHIPNYPNLPPQLICQ 66
           L  ELW ACAGPLV +P  G RV YFPQGH EQ+ A TN+  VD  IP++ NLPP+++C+
Sbjct: 18  LYMELWKACAGPLVEVPRYGERVFYFPQGHMEQLVALTNQGVVDQEIPDF-NLPPKILCR 76

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 126
           + +V + A+ ETDEVYAQ+TLQP   + +  +  P  L  P+KQ  + F K LTASDTST
Sbjct: 77  VLSVMLKAEHETDEVYAQITLQPEEDQSEPTSLDP-PLVEPAKQSVDSFVKILTASDTST 135

Query: 127 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 186
           HGGFSV R+ A +  PSLD       QEL+ARDLH  EW+F+HIFRGQP+RHLLTTGWS 
Sbjct: 136 HGGFSVLRKHATECLPSLDMRQPTQTQELVARDLHGYEWRFKHIFRGQPRRHLLTTGWST 195

Query: 187 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 246
           FV++KRLVAGD+ +F+  +   L +G+RR  R  + MP+SV+SS SMH+G+LA A+HA  
Sbjct: 196 FVTSKRLVAGDAFVFLRGQTGDLRVGVRRLARQQSTMPASVISSQSMHLGVLATASHAVN 255

Query: 247 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 306
           T + F VF+ PR   S+F+I + KY+ A       +GMRFRM FE EES  R + GTI G
Sbjct: 256 TKTLFVVFYKPRI--SQFIIGVNKYM-AAMKIGFPIGMRFRMRFEGEESPERIFTGTIVG 312

Query: 307 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS 355
             DL   +W  S WRS+++ WDE +  +R  +VS WEIEP +   + P+
Sbjct: 313 TGDLSS-QWPASKWRSLQIQWDEPSTVQRPNKVSTWEIEPFSPSVLTPT 360



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 7/91 (7%)

Query: 652 HNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELREELG 710
           +NS     QD + L        Q T TR+  KV K G+ VGR++D++   SY+EL  EL 
Sbjct: 475 NNSGSAKCQDPNSLTEQ----KQQTSTRSRTKVQKQGTAVGRAVDLTLLRSYDELINELE 530

Query: 711 QMFGIEGKFEDPLRSGWQLVFVDRENDVLLL 741
           +MF I+G+     +  W +VF D E D++L+
Sbjct: 531 KMFEIDGELSP--KDKWAIVFTDDEGDMMLV 559


>gi|356504181|ref|XP_003520877.1| PREDICTED: auxin response factor 18-like [Glycine max]
          Length = 662

 Score =  355 bits (910), Expect = 8e-95,   Method: Compositional matrix adjust.
 Identities = 180/346 (52%), Positives = 243/346 (70%), Gaps = 7/346 (2%)

Query: 2   IGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 61
           +GD   L ++LW  CAGPLV +P  G RV YFPQGH EQ+ A+TN+ ++  IP++ NLPP
Sbjct: 4   VGDGD-LYTQLWKLCAGPLVDVPRQGERVFYFPQGHMEQLQASTNQGLNQEIPHF-NLPP 61

Query: 62  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTA 121
           +++C++ ++ + A+ ETDEVYA++TL P S +E+  +  P       KQ  + F K LTA
Sbjct: 62  KILCRVVHIQLLAEQETDEVYARITLLPESNQEEPTSPDPSPPET-QKQVFHTFSKILTA 120

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSV RR A +  P LD +   P+QEL+A DLH  EWKF+HIFRGQP+RHLLT
Sbjct: 121 SDTSTHGGFSVLRRHATECLPQLDMTQTTPSQELVAEDLHGFEWKFKHIFRGQPRRHLLT 180

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWS FV++K+LVAGD+ +F+  E  +L +G+RR  R  + MPSSV+SS SMH+G+LA A
Sbjct: 181 TGWSTFVTSKKLVAGDAFVFLRGENGELRVGVRRVARQQSPMPSSVISSQSMHLGVLATA 240

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           +HA  T++ F V++ PR   S+F+I + KY++A  + + SVGMRF+M FE E+S  RR+ 
Sbjct: 241 SHAFLTSTMFVVYYKPRT--SQFIIGVNKYLEAE-NNKFSVGMRFKMRFEVEDSPERRFS 297

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 347
           GTI G+ D+ P  W NS WRS+KV WDE     R  RVS WEIEP 
Sbjct: 298 GTIVGVGDVSP-GWWNSQWRSLKVQWDEPAIIPRPERVSSWEIEPF 342



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/88 (42%), Positives = 57/88 (64%), Gaps = 3/88 (3%)

Query: 678 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           TRT  KV   G +VGR++D++    Y++L +EL +MF I+G+ +  +++ W + F D  N
Sbjct: 555 TRTRTKVQMQGIAVGRAVDLTVLKDYDDLIDELEKMFDIKGELQ--MQTKWAITFTDDGN 612

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPEDV 764
           D++L+GDDPW  F + V  I I S EDV
Sbjct: 613 DMMLVGDDPWPEFCTVVKRIFICSREDV 640


>gi|449524944|ref|XP_004169481.1| PREDICTED: auxin response factor 4-like isoform 1 [Cucumis sativus]
          Length = 802

 Score =  354 bits (909), Expect = 9e-95,   Method: Compositional matrix adjust.
 Identities = 185/373 (49%), Positives = 240/373 (64%), Gaps = 32/373 (8%)

Query: 11  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYP------NLPPQLI 64
           ELWHACAGPL SLP  G  VVYFPQGH EQ+A+ +        P  P      +L P ++
Sbjct: 54  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASAS--------PFSPMEMRTFDLQPHIL 105

Query: 65  CQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIEL--------------GIPSKQ 110
           C++ NV + A+ E DEVY Q+TL+PL PE         EL              G P++ 
Sbjct: 106 CRVINVHLLANKENDEVYTQLTLRPL-PELLGTGVAGKELEELALNGADGDGSGGSPTRS 164

Query: 111 PTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHI 170
             + FCKTLTASDTSTHGGFSVPRRAAE  FP LD++   P+QELIA+DLH VEW+FRHI
Sbjct: 165 TPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYTQLRPSQELIAKDLHGVEWRFRHI 224

Query: 171 FRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSS 230
           +RGQP+RHLLTTGWS+FVS K L++GD+VLF+  E  +L LGIRRA+RP   +P S++ +
Sbjct: 225 YRGQPRRHLLTTGWSIFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDSIVGN 284

Query: 231 DSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLF 290
            +     LA    A +T S F VF+NPRA  ++F+I   KYVK++ +  VSVG RF+M F
Sbjct: 285 QNSCANDLARVVKAISTKSTFDVFYNPRAYHAQFIISCQKYVKSI-NNPVSVGTRFKMRF 343

Query: 291 ETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTF 350
           E ++S  RR+ G + GISD+D  RW NS WR + V WD+ +  + Q RVS WEI+P  + 
Sbjct: 344 EMDDSPERRFNGVVVGISDMDSFRWPNSKWRCLTVRWDKDS--DHQERVSPWEIDPSVSL 401

Query: 351 PMYPSLFPLRLKR 363
           P        RLK+
Sbjct: 402 PPLSVQSSPRLKK 414



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 45/121 (37%), Positives = 71/121 (58%), Gaps = 2/121 (1%)

Query: 648 DSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELR 706
           D   +++  GC      L        Q +  R+  KV+K GS VGR++D+SR + Y +L 
Sbjct: 643 DEHVNDNATGCKLFGFSLTTETATNVQSSGKRSCTKVHKQGSLVGRAIDLSRLNGYTDLI 702

Query: 707 EELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQK 766
            EL ++F +EG  +DP + GW++++ D ENDV+++GD PW  F   V  I I + E+V+K
Sbjct: 703 SELERLFSMEGLLKDPDK-GWRVLYTDNENDVMVVGDYPWHDFCDAVSKIHIYTQEEVEK 761

Query: 767 M 767
           M
Sbjct: 762 M 762


>gi|449463651|ref|XP_004149545.1| PREDICTED: auxin response factor 4-like [Cucumis sativus]
 gi|449524946|ref|XP_004169482.1| PREDICTED: auxin response factor 4-like isoform 2 [Cucumis sativus]
          Length = 733

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 185/373 (49%), Positives = 240/373 (64%), Gaps = 32/373 (8%)

Query: 11  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYP------NLPPQLI 64
           ELWHACAGPL SLP  G  VVYFPQGH EQ+A+ +        P  P      +L P ++
Sbjct: 54  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASAS--------PFSPMEMRTFDLQPHIL 105

Query: 65  CQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIEL--------------GIPSKQ 110
           C++ NV + A+ E DEVY Q+TL+PL PE         EL              G P++ 
Sbjct: 106 CRVINVHLLANKENDEVYTQLTLRPL-PELLGTGVAGKELEELALNGADGDGSGGSPTRS 164

Query: 111 PTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHI 170
             + FCKTLTASDTSTHGGFSVPRRAAE  FP LD++   P+QELIA+DLH VEW+FRHI
Sbjct: 165 TPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYTQLRPSQELIAKDLHGVEWRFRHI 224

Query: 171 FRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSS 230
           +RGQP+RHLLTTGWS+FVS K L++GD+VLF+  E  +L LGIRRA+RP   +P S++ +
Sbjct: 225 YRGQPRRHLLTTGWSIFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDSIVGN 284

Query: 231 DSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLF 290
            +     LA    A +T S F VF+NPRA  ++F+I   KYVK++ +  VSVG RF+M F
Sbjct: 285 QNSCANDLARVVKAISTKSTFDVFYNPRAYHAQFIISCQKYVKSI-NNPVSVGTRFKMRF 343

Query: 291 ETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTF 350
           E ++S  RR+ G + GISD+D  RW NS WR + V WD+ +  + Q RVS WEI+P  + 
Sbjct: 344 EMDDSPERRFNGVVVGISDMDSFRWPNSKWRCLTVRWDKDS--DHQERVSPWEIDPSVSL 401

Query: 351 PMYPSLFPLRLKR 363
           P        RLK+
Sbjct: 402 PPLSVQSSPRLKK 414



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 45/121 (37%), Positives = 71/121 (58%), Gaps = 2/121 (1%)

Query: 648 DSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELR 706
           D   +++  GC      L        Q +  R+  KV+K GS VGR++D+SR + Y +L 
Sbjct: 574 DEHVNDNATGCKLFGFSLTTETATNVQSSGKRSCTKVHKQGSLVGRAIDLSRLNGYTDLI 633

Query: 707 EELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQK 766
            EL ++F +EG  +DP + GW++++ D ENDV+++GD PW  F   V  I I + E+V+K
Sbjct: 634 SELERLFSMEGLLKDPDK-GWRVLYTDNENDVMVVGDYPWHDFCDAVSKIHIYTQEEVEK 692

Query: 767 M 767
           M
Sbjct: 693 M 693


>gi|47496700|dbj|BAD19065.1| auxin response factor 5 [Cucumis sativus]
          Length = 733

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 185/373 (49%), Positives = 240/373 (64%), Gaps = 32/373 (8%)

Query: 11  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYP------NLPPQLI 64
           ELWHACAGPL SLP  G  VVYFPQGH EQ+A+ +        P  P      +L P ++
Sbjct: 54  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASAS--------PFSPMEMRTFDLQPHIL 105

Query: 65  CQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIEL--------------GIPSKQ 110
           C++ NV + A+ E DEVY Q+TL+PL PE         EL              G P+K 
Sbjct: 106 CRVINVHLLANKENDEVYTQLTLRPL-PELLGTGVAGKELEELALNGADGDGSGGSPTKS 164

Query: 111 PTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHI 170
             + FCKTLTASDTSTHGGFSVPRRAAE  FP LD++   P+QELIA+DLH VEW+FRHI
Sbjct: 165 TPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYTQLRPSQELIAKDLHGVEWRFRHI 224

Query: 171 FRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSS 230
           +RGQP+RHLLTTGWS+FVS K L++GD+VLF+  E  +L LGIRRA+RP   +P S++ +
Sbjct: 225 YRGQPRRHLLTTGWSIFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDSIVGN 284

Query: 231 DSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLF 290
            +     LA    A +T S F VF+NPRA  ++F+I   KYVK++ +  VSVG RF+M F
Sbjct: 285 QNSCANDLARVVKAISTKSTFDVFYNPRAYHAQFIISCQKYVKSI-NNPVSVGTRFKMRF 343

Query: 291 ETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTF 350
           E ++S  R++ G + GISD+D  RW NS WR + V WD+ +  + Q RVS WEI+P  + 
Sbjct: 344 EMDDSPERKFNGVVVGISDMDSFRWPNSKWRCLTVRWDKDS--DHQERVSPWEIDPSVSL 401

Query: 351 PMYPSLFPLRLKR 363
           P        RLK+
Sbjct: 402 PPLSVQSSPRLKK 414



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 45/121 (37%), Positives = 71/121 (58%), Gaps = 2/121 (1%)

Query: 648 DSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELR 706
           D   +++  GC      L        Q +  R+  KV+K GS VGR++D+SR + Y +L 
Sbjct: 574 DEHVNDNATGCKLFGFSLTTETATNVQSSGKRSCTKVHKQGSLVGRAIDLSRLNGYTDLI 633

Query: 707 EELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQK 766
            EL ++F +EG  +DP + GW++++ D ENDV+++GD PW  F   V  I I + E+V+K
Sbjct: 634 SELERLFSMEGLLKDPDK-GWRVLYTDNENDVMVVGDYPWHDFCDAVSKIHIYTQEEVEK 692

Query: 767 M 767
           M
Sbjct: 693 M 693


>gi|356522502|ref|XP_003529885.1| PREDICTED: auxin response factor 7-like [Glycine max]
          Length = 722

 Score =  353 bits (905), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 176/340 (51%), Positives = 234/340 (68%), Gaps = 6/340 (1%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           L  ELW  CAGPLV +P  G RV YFPQGH EQ+ A+T++E++  IP++ NLP ++ C++
Sbjct: 28  LYRELWKLCAGPLVDVPRNGDRVFYFPQGHMEQLQASTDQELNQEIPHF-NLPAKIFCRV 86

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTH 127
            N+ + A+ +TDEVYA + L P S + +     P     P KQ  + FCK LTASDTSTH
Sbjct: 87  VNIQLLAEQDTDEVYACIALLPESDQTEPTNPDPNVSEAP-KQKFHSFCKILTASDTSTH 145

Query: 128 GGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 187
           GGFSV R+ A +  P LD +   P QEL A+DLH  EWKF+HI+RGQP+RHLLTTGWS F
Sbjct: 146 GGFSVLRKHATECLPELDMTQSTPTQELAAKDLHGFEWKFKHIYRGQPRRHLLTTGWSTF 205

Query: 188 VSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAAT 247
           V++KRLVAGD+ +F+  E  QL +G+RR  R  + MPSSV+SS SMH+G+LA A+HA  T
Sbjct: 206 VASKRLVAGDAFVFLRGEHGQLRVGVRRLARQQSPMPSSVISSQSMHLGVLATASHAVMT 265

Query: 248 NSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGI 307
            + F V++ PR   S+F++ L KY++AV + + S+ MRF+M FE ++S  RR+ GTI G+
Sbjct: 266 RTMFLVYYKPRT--SQFIVGLNKYLEAV-NNKFSLSMRFKMRFEGDDSPERRFSGTIVGV 322

Query: 308 SDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 347
            D+    WSNS WRS+KV WDE     R  RVS WEIEP 
Sbjct: 323 GDVS-AGWSNSQWRSLKVQWDEPATIPRPDRVSCWEIEPF 361



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/90 (42%), Positives = 55/90 (61%), Gaps = 3/90 (3%)

Query: 679 RTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 737
           RT  KV   G +VGR+ D++  S Y++L +EL ++F I G+     +  W + F D END
Sbjct: 602 RTRTKVQMQGVAVGRAFDLTTLSGYDDLIDELEKLFEIRGELRS--QDKWAVTFTDDEND 659

Query: 738 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           ++L GDDPW  F + V  I I S ED++KM
Sbjct: 660 MMLAGDDPWPEFCNMVKRIFICSREDLKKM 689


>gi|255555629|ref|XP_002518850.1| hypothetical protein RCOM_1311830 [Ricinus communis]
 gi|223541837|gb|EEF43383.1| hypothetical protein RCOM_1311830 [Ricinus communis]
          Length = 694

 Score =  352 bits (904), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 190/370 (51%), Positives = 256/370 (69%), Gaps = 15/370 (4%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           GD+  L +ELW ACAGPLV +P  G RV YFPQGH EQ+ A+TN+E++  +P + NLP +
Sbjct: 19  GDD--LYTELWKACAGPLVDVPKDGERVFYFPQGHMEQLEASTNQELNQRVPLF-NLPSK 75

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNY-FCKTLTA 121
           ++C++ N+ + A+ +TDEVYAQ+TL P S + +  +  P     PS++P  + FCK LTA
Sbjct: 76  ILCRVINIHLLAEQDTDEVYAQITLLPESDQTEPTSPDP-SPAEPSRRPAVHSFCKVLTA 134

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSV R+ A +  P LD +   P QEL+A+DLH  EW+F+HIFRGQP+RHLLT
Sbjct: 135 SDTSTHGGFSVLRKHATECLPQLDMTQPTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT 194

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWS FV++KRLVAGDS +F+  E  +L +G+RR  R  + MPSSV+SS SMH+G+LA A
Sbjct: 195 TGWSTFVTSKRLVAGDSFVFLRGENGELRVGVRRLARQQSSMPSSVISSQSMHLGVLATA 254

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           +HA AT + F V++ PR   S+F+I L KY++A+ + + SVGMRF+M FE E+S  RR+ 
Sbjct: 255 SHAVATQTLFVVYYKPRT--SQFIISLNKYLEAI-NNKFSVGMRFKMRFEGEDSPERRFS 311

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLF---- 357
           GTI G+ D  P  W +S WR +KV WDE  +  R  +VS WEIEP +     PS      
Sbjct: 312 GTIVGVEDFSP-HWLDSKWRQLKVQWDEPASIPRPDKVSPWEIEPFSA--SAPSNISQPV 368

Query: 358 PLRLKRPWHP 367
           PL+ KRP  P
Sbjct: 369 PLKNKRPRPP 378



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 59/91 (64%), Gaps = 3/91 (3%)

Query: 678 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           TR+  KV   G +VGR++D++    YN+L +EL +MF I+G+     R  W++V+ D E 
Sbjct: 581 TRSRTKVQMQGVAVGRAIDLTMIKGYNQLLDELEEMFDIKGQLHP--RDKWEIVYTDDEG 638

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           D++L+GDDPW  F + V  I I S +DV+KM
Sbjct: 639 DMMLVGDDPWPEFCNMVRRIFICSSQDVKKM 669


>gi|297817514|ref|XP_002876640.1| hypothetical protein ARALYDRAFT_349241 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322478|gb|EFH52899.1| hypothetical protein ARALYDRAFT_349241 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 608

 Score =  352 bits (903), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 191/378 (50%), Positives = 252/378 (66%), Gaps = 23/378 (6%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSH-IPNYPNLPPQLICQ 66
           L +ELW  CAGPLV +P    RV YFPQGH EQ+ A+TN+ + S  IP + +LPP+++C+
Sbjct: 22  LYTELWKVCAGPLVEVPRADERVFYFPQGHMEQLVASTNQGIKSEEIPVF-DLPPKILCR 80

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 126
           +  +T+ A+ ETDEVYAQ+TLQP   + +  +  P  L  P+KQ  + F K LTASDTST
Sbjct: 81  VLGITLKAEHETDEVYAQITLQPEEDQSEPTSLDP-PLVEPTKQMFHSFVKILTASDTST 139

Query: 127 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 186
           HGGFSV R+ A +  P+LD +   P QEL+ RDLH  EW+F+HIFRGQP+RHLLTTGWS 
Sbjct: 140 HGGFSVLRKHATECLPALDMTQATPTQELVTRDLHGFEWRFKHIFRGQPRRHLLTTGWST 199

Query: 187 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 246
           FVS+KRLVAGD+ +F+  E   L +G+RR  R  + MP+SV+SS SMH+G+LA A+HA  
Sbjct: 200 FVSSKRLVAGDAFVFLRGENGDLRVGVRRLARHQSTMPTSVISSQSMHLGVLATASHAVR 259

Query: 247 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEES----------- 295
           T + F VF+ PR   S+F++ + KY++A+ H   S+G RFRM FE EES           
Sbjct: 260 TTTIFVVFYKPRI--SQFIVGVNKYMEAIKHG-FSLGTRFRMRFEGEESPERIVLDSETW 316

Query: 296 SVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPM-Y 353
           SV R+ GTI G  DL   +W  S WRS++V WDE T  +R  +VS WEIEP L T P+  
Sbjct: 317 SVFRFTGTIVGTGDLSS-QWPASKWRSLQVQWDEPTTVQRPDKVSPWEIEPFLATSPIST 375

Query: 354 PSLFP-LRLK--RPWHPS 368
           P+  P L+ K  RP  PS
Sbjct: 376 PAQQPQLKCKRSRPTEPS 393



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/92 (42%), Positives = 56/92 (60%), Gaps = 3/92 (3%)

Query: 678 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           +R+  KV   G +VGR++D++   SY+EL EEL +MF I+G+     R  W +VF D E 
Sbjct: 502 SRSRTKVQMQGIAVGRAVDLTLLKSYDELIEELEEMFEIQGQLRP--RDKWIVVFTDDEG 559

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKMG 768
           D++L GDDPW  F      I I S ++V+KM 
Sbjct: 560 DMMLAGDDPWNEFCKMAKKIFIYSSDEVKKMA 591


>gi|449517487|ref|XP_004165777.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 9-like,
           partial [Cucumis sativus]
          Length = 584

 Score =  352 bits (903), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 182/362 (50%), Positives = 245/362 (67%), Gaps = 7/362 (1%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           L  ELW ACAGPLV +P V  RV YFPQGH EQ+ A+TN E++  IP + NL  +++C++
Sbjct: 24  LYMELWRACAGPLVDIPRVDERVFYFPQGHMEQLEASTNLELNKRIPLF-NLDSKILCRV 82

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTH 127
            ++   AD E+DEVYAQ+TL P S + +  + +      P +   + FCK LTASDTSTH
Sbjct: 83  IHIEPLADHESDEVYAQITLMPESNQNEPKS-MDPCPPEPPRPVVHSFCKVLTASDTSTH 141

Query: 128 GGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 187
           GGFSV R+ A +  P LD +L  P Q+L+A+DLH  EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 142 GGFSVLRKHATECLPPLDMTLATPTQDLVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 201

Query: 188 VSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAAT 247
           V++KRL AGDS +F+  +  +L +G+RR  R  + MP SV+SS SMH+G+LA A+HA  T
Sbjct: 202 VTSKRLSAGDSFVFLRGDNGELRVGVRRRARQQSSMPPSVISSQSMHLGVLATASHAVTT 261

Query: 248 NSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGI 307
            + F V++ PR    +F+I L KY++AV + + SVGMRF M FE E+S  RR+ GTI G 
Sbjct: 262 QTRFVVYYKPRT--CQFIISLNKYLEAV-NNKFSVGMRFNMSFEGEDSPERRFSGTIIGA 318

Query: 308 SDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFP-LRLKRPWH 366
            D+ P  W NS WRS++V WDE T+  R  RVS W+IEPLT+  +     P  + KRP  
Sbjct: 319 VDISP-HWPNSSWRSLRVQWDEQTSILRPDRVSPWDIEPLTSSAVTGLSQPXFKNKRPRQ 377

Query: 367 PS 368
           P+
Sbjct: 378 PT 379


>gi|357453821|ref|XP_003597191.1| Auxin response factor [Medicago truncatula]
 gi|355486239|gb|AES67442.1| Auxin response factor [Medicago truncatula]
          Length = 822

 Score =  351 bits (901), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 185/376 (49%), Positives = 240/376 (63%), Gaps = 26/376 (6%)

Query: 11  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 70
           ELWHACAGPL SLP  G  VVYFPQGH EQVA+ +       IP Y  L PQ++C++ NV
Sbjct: 56  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASLSLFS-SLEIPTY-GLQPQILCRVVNV 113

Query: 71  TMHADVETDEVYAQMTLQPLSP-------EEQKDTFVPIELG---IPSKQPTNYFCKTLT 120
            + A+ E DEVY Q+ L P +        +++ +     + G    P+K  ++ FCKTLT
Sbjct: 114 QLLANKENDEVYTQVALLPQAELAGMCLDDKEPEGLEADDEGNGRSPTKLASHMFCKTLT 173

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRG------- 173
           ASDTSTHGGFSVPRRAAE  FP LD+  Q P+QEL+A+DLH V WKFRHI+RG       
Sbjct: 174 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVGWKFRHIYRGRDETELL 233

Query: 174 -----QPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVL 228
                QP+RHLLTTGWS+FVS K LV+GD+VLF+  E  +L LGIRRA RP   +P S++
Sbjct: 234 CWLDCQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGENGELRLGIRRAARPRNGLPESII 293

Query: 229 SSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM 288
            + S     L++ A+A +  S F VF++PRAS ++FV+P  KY K++    V++G RF+M
Sbjct: 294 GNQSCSPSFLSSVANAISAKSMFHVFYSPRASHADFVVPYQKYAKSI-RNPVTIGTRFKM 352

Query: 289 LFETEESSVRRY-MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 347
            FE +ES  RR   G +TG+SDLDP +W  S WR + V WDE      Q RVS WEI+P 
Sbjct: 353 KFEMDESPERRCSSGIVTGMSDLDPYKWPKSKWRCLMVRWDEDIGANHQDRVSPWEIDPS 412

Query: 348 TTFPMYPSLFPLRLKR 363
           T+ P        RLK+
Sbjct: 413 TSLPPLNIQSSRRLKK 428



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 45/95 (47%), Positives = 67/95 (70%), Gaps = 2/95 (2%)

Query: 674 QLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFV 732
           Q +  R+  KV+K GS VGR++D+SR SSYN+L  EL ++FG+EG   DP + GW++++ 
Sbjct: 689 QNSAKRSCTKVHKQGSLVGRAIDLSRLSSYNDLVSELERLFGMEGLLRDPDK-GWRILYT 747

Query: 733 DRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           D END++++GDDPW  F   V  I I + E+V+KM
Sbjct: 748 DSENDIMVVGDDPWHEFCDMVSKIHIYTQEEVEKM 782


>gi|356496084|ref|XP_003516900.1| PREDICTED: auxin response factor 9-like [Glycine max]
          Length = 692

 Score =  351 bits (900), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 187/365 (51%), Positives = 250/365 (68%), Gaps = 10/365 (2%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           L  + W ACAGPLV +P VG RV YFPQGH EQ+ A+TN+E++  IP    LP +++C++
Sbjct: 21  LYEQQWKACAGPLVDVPRVGQRVFYFPQGHMEQLEASTNQELNQRIP-LLKLPTKILCRV 79

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTH 127
            NV + A+ ETDEVYAQ+TL P S +++     P     P + P + F K LTASDTSTH
Sbjct: 80  VNVHLLAEQETDEVYAQITLVPESSQDEPTNADPC-TAEPPRAPVHSFSKVLTASDTSTH 138

Query: 128 GGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 187
           GGFSV R+ A +  P LD S   P QEL+A+DLH  EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 139 GGFSVLRKHATECLPVLDMSQPTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 198

Query: 188 VSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAAT 247
           V++KRLVAGD+ +F+  +  +L +G+RR  R  + MPSSV+SS SMH+G+LA A+HA AT
Sbjct: 199 VTSKRLVAGDTFVFLRGDNGELRVGVRRLARQASSMPSSVISSQSMHLGVLATASHAVAT 258

Query: 248 NSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSV--RRYMGTIT 305
            + F V++ PR   S+F+I + KY++A+   + SVGMRF+M FE ++S+   +R+ GTI 
Sbjct: 259 QTLFVVYYKPRT--SQFIIGVNKYLEAM-DKKFSVGMRFKMRFEGDDSAETDKRFSGTIV 315

Query: 306 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFP--LRLKR 363
           G+ D+ P  W NS WRS+KV WDE  A  R  RVS WEIEP       PS+ P  ++ KR
Sbjct: 316 GVEDISP-HWVNSKWRSLKVQWDEPAAVPRPDRVSPWEIEPFVASASTPSVQPTMVKTKR 374

Query: 364 PWHPS 368
           P  PS
Sbjct: 375 PRPPS 379



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/131 (35%), Positives = 75/131 (57%), Gaps = 8/131 (6%)

Query: 642 SSMPLGDSGFHN--SMYGCMQDSSELLH---NVGQIDQLTPTRTFVKVYKSGSVGRSLDI 696
           S++   D+G  +  SM   M+   E L       Q  Q+  +RT V++ +  +VGR++D+
Sbjct: 541 STLSRTDAGHKSDVSMASSMERKQEQLQVSPKDTQSKQICRSRTKVQM-QGVAVGRAVDL 599

Query: 697 SRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYI 756
           +    Y +L  EL  MF I+G+ +   R+ W++VF D E D++L+GDDPW  F + V  I
Sbjct: 600 TMLDGYGQLINELEDMFNIKGQLQH--RNKWEIVFTDDEGDMMLVGDDPWPEFCNMVRRI 657

Query: 757 KILSPEDVQKM 767
            I S +DV+KM
Sbjct: 658 FICSSQDVKKM 668


>gi|449533118|ref|XP_004173524.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 9-like,
           partial [Cucumis sativus]
          Length = 669

 Score =  351 bits (900), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 185/368 (50%), Positives = 253/368 (68%), Gaps = 11/368 (2%)

Query: 11  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 70
           ELW   AGPLV +P +  +V+YFPQGH EQ+ A+TN+E++  +P + NLP +++CQ+ + 
Sbjct: 1   ELWKVSAGPLVEIPRINEKVLYFPQGHMEQLEASTNQELNQKLPLF-NLPXKILCQVVDT 59

Query: 71  TMHADVETDEVYAQMTLQPLSPEEQKDTFVP--IELGIPSKQPTNYFCKTLTASDTSTHG 128
            + A+ ++DEVYAQ+TL P + +    TF P  IE     K   + FCK LTASDTSTHG
Sbjct: 60  RLLAEQDSDEVYAQITLMPEANQALPSTFEPPLIEC---RKTKVHSFCKVLTASDTSTHG 116

Query: 129 GFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFV 188
           GFSV R+ A +  P LD + Q P QEL+A+DLH  EW+F+HIFRGQP+RHLLTTGWS FV
Sbjct: 117 GFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 176

Query: 189 SAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAATN 248
           ++KRLVAGDS +F+  E  +L +G+RR  R  + MPSSV+SS SMH+G+LA A+HA +T 
Sbjct: 177 TSKRLVAGDSFVFLRGENGELRVGVRRLARQQSSMPSSVISSHSMHLGVLATASHAVSTQ 236

Query: 249 SCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGIS 308
           + F V++ PRA  S+F++ L+KY++A+ + +  VGMRF+M FE EES  RR+ GTI G+ 
Sbjct: 237 TRFVVYYKPRA--SQFIVSLSKYMEAM-NNKFMVGMRFKMRFEGEESPERRFSGTIVGVD 293

Query: 309 DLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSLFPLRLKRPWHP 367
           D+ P  W NS WRS++V WDE  + +R  RVS WEIEP     P  P    ++ KRP  P
Sbjct: 294 DMSP-HWPNSEWRSLRVQWDELASIQRPDRVSPWEIEPFVAPTPSIPHSISVKNKRPRPP 352

Query: 368 STSSFNDN 375
                +DN
Sbjct: 353 LEIPDSDN 360



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 53/80 (66%), Gaps = 3/80 (3%)

Query: 689 SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEA 748
           +VGR++D++    Y +L +EL +MF I+G+     R+ W++VF D E D++L+GD PW+ 
Sbjct: 569 AVGRAVDLTTLEGYGQLIDELEKMFDIKGELRP--RNKWEIVFTDDEGDMMLMGDYPWQE 626

Query: 749 FVSNVWYIKILSPEDVQKMG 768
           F + V  I I S +DV KMG
Sbjct: 627 FCNMVRRIYIWSSQDV-KMG 645


>gi|357472327|ref|XP_003606448.1| Auxin response factor [Medicago truncatula]
 gi|355507503|gb|AES88645.1| Auxin response factor [Medicago truncatula]
          Length = 471

 Score =  351 bits (900), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 198/423 (46%), Positives = 264/423 (62%), Gaps = 38/423 (8%)

Query: 11  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTN-KEVDSHIPNYPNLPPQLICQLHN 69
           ELWHACAGPL SLP  G  VVYFPQGH EQ A+ +  K+++  IPNY +L PQ+ C++ N
Sbjct: 54  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQFASFSPFKQLE--IPNY-DLQPQIFCRVVN 110

Query: 70  VTMHADVETDEVYAQMTLQPLSP----------EEQKDTFVPIELGIPSKQPTNYFCKTL 119
           V + A+ E DEVY Q+TL P +            E+ +     + G P+K   + FCKTL
Sbjct: 111 VQLLANKENDEVYTQVTLLPQAELAGMHMEGKEVEELEGDEEGDGGSPTKSTPHMFCKTL 170

Query: 120 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 179
           T SDTSTHGGFSVPRRAAE  FP LD+ LQ P+QEL+A+DLH VEWKFRHI+RGQP+RHL
Sbjct: 171 TVSDTSTHGGFSVPRRAAEDCFPPLDYKLQRPSQELVAKDLHGVEWKFRHIYRGQPRRHL 230

Query: 180 LTTGWSVFVSAKRLVAGDSVLFI--------------WNEKNQLLLGIRRAIRPPTVMPS 225
           LTTGWS+FV+ K LV+GD+VLF+              W +  +L LGIRRA+RP   +P 
Sbjct: 231 LTTGWSIFVNQKNLVSGDAVLFLRGQDCVHLSSPDLTWGQNGELRLGIRRAVRPRNGLPE 290

Query: 226 SVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMR 285
           S++ + + +   L++ A+A +T S F VF++PRAS +EFV+P  KYVK++    +++G R
Sbjct: 291 SIVGNQNCYPNFLSSVANAISTKSMFHVFYSPRASHAEFVVPYQKYVKSI-KNPMTIGTR 349

Query: 286 FRMLFETEESSVRRY-MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEI 344
           F+M  E +ES  RR   G + GI+DLDP RW  S WR + V WD+ T    Q RVS WEI
Sbjct: 350 FKMRIEMDESPERRCSSGMLIGINDLDPYRWPKSKWRCLMVRWDDDTETNHQDRVSPWEI 409

Query: 345 EPLTTFPMYPSLFPLRLKRPWHPSTSSFNDNRDETASGLNWLRGGTGE-QGLTTLNFQSL 403
           +P +  P        RLK+   P T     + +   +G+N      GE + L  LNF   
Sbjct: 410 DPSSPQPPLSIQSSPRLKK---PRTGLLVASPNHLITGMN----PNGEMECLLLLNFMYQ 462

Query: 404 GMF 406
            +F
Sbjct: 463 ALF 465


>gi|297824735|ref|XP_002880250.1| hypothetical protein ARALYDRAFT_904120 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297326089|gb|EFH56509.1| hypothetical protein ARALYDRAFT_904120 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 600

 Score =  350 bits (899), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 179/349 (51%), Positives = 239/349 (68%), Gaps = 7/349 (2%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNK-EVDSHIPNYPNLPPQLICQ 66
           L SELW ACAGPLV +P    RV YFPQGH EQ+ A+TN+  VD  IP + NLPP+++C+
Sbjct: 18  LYSELWKACAGPLVEVPRSNERVFYFPQGHMEQLVASTNQGVVDQEIPVF-NLPPKILCR 76

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 126
           + +V + A+ ETDEVYAQ+TLQP   + +  +  P  L  P+K   + F K LTASDTST
Sbjct: 77  VLSVMLKAEHETDEVYAQITLQPEEDQSEPTSLDP-PLVEPAKPTVDSFVKILTASDTST 135

Query: 127 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 186
           HGGFSV R+ A +  PSLD +   P QEL+ARDLH  EW+F+HIFRGQP+RHLLTTGWS 
Sbjct: 136 HGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRGQPRRHLLTTGWST 195

Query: 187 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 246
           FV++KRLVAGD+ +F+  +   L +G+RR  +  + MP+SV+SS SM +G+LA A+HA  
Sbjct: 196 FVTSKRLVAGDAFVFLRGQTGDLRVGVRRLAKQQSTMPASVISSQSMRLGVLATASHAVT 255

Query: 247 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 306
           T + F VF+ PR   S+F+I + KY+ A+     S+GMRFRM FE EES  R + GTI G
Sbjct: 256 TTTIFVVFYKPRI--SQFIISVNKYMVAM-KNGFSLGMRFRMRFEGEESPERIFTGTIVG 312

Query: 307 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS 355
             DL   +W  S WRS+++ WDE ++  R  +VS WEIEP +   + P+
Sbjct: 313 SGDLSS-QWPASKWRSLQIQWDEPSSIPRPNKVSPWEIEPFSPSALTPT 360



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 43/126 (34%), Positives = 71/126 (56%), Gaps = 5/126 (3%)

Query: 648 DSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELR 706
           DS   +S   C   +S   ++  +  Q T TR+ +KV   G+ VGR++D++   SY+EL 
Sbjct: 460 DSNISDSTPKCQDPNSS--NSPKEQKQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDELI 517

Query: 707 EELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQK 766
           +EL +MF IEG+     +  W +VF D E D++L+GDDPW  F      + I   ++V+K
Sbjct: 518 KELEKMFEIEGELSP--KDKWTIVFTDDEGDMMLVGDDPWNEFCKMAKKLFIYPSDEVKK 575

Query: 767 MGEQGV 772
           +  + +
Sbjct: 576 LSSKSL 581


>gi|356504356|ref|XP_003520962.1| PREDICTED: auxin response factor 9-like [Glycine max]
          Length = 691

 Score =  350 bits (897), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 190/381 (49%), Positives = 256/381 (67%), Gaps = 13/381 (3%)

Query: 12  LWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNVT 71
           LW  CAGPLV +P VG RV YFPQGH EQ+ A+TN+E++  IP    LP +++C++ NV 
Sbjct: 25  LWKGCAGPLVDVPRVGQRVFYFPQGHMEQLEASTNQELNQRIP-LLKLPTKILCRVVNVH 83

Query: 72  MHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTHGGFS 131
           + A+ ETDEVYAQ+TL P S +++     P     P + P + F K LTASDTSTHGGFS
Sbjct: 84  LLAEQETDEVYAQITLVPESNQDEPMNPDPC-TAEPPRAPVHSFSKVLTASDTSTHGGFS 142

Query: 132 VPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAK 191
           V R+ A +  P+LD S   P QEL+A+DLH  EW+F+HIFRGQP+RHLLTTGWS FV++K
Sbjct: 143 VLRKHAMECLPALDMSQPTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSK 202

Query: 192 RLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAATNSCF 251
           RLVAGD+ +F+  +  +L +G+RR  R  + MPSSV+SS SMH+G+LA A+HA AT + F
Sbjct: 203 RLVAGDTFVFLRGDNGELRVGVRRLARQASSMPSSVISSQSMHLGVLATASHAVATQTLF 262

Query: 252 TVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSV--RRYMGTITGISD 309
            V++ PR   S+F+I + KY++A+   R SVGMR +M FE ++S+   +R+ GTI G+ D
Sbjct: 263 VVYYKPRT--SQFIISVNKYLEAM--NRFSVGMRLKMRFEGDDSAETDKRFSGTIVGVED 318

Query: 310 LDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFP--LRLKRPWHP 367
           + P  W NS WRS+KV WDE  A  R  RVS WEIEP       PS+ P  ++ KRP  P
Sbjct: 319 ISP-HWVNSKWRSLKVQWDEPAAVPRPDRVSPWEIEPFVASASTPSVQPTMVKTKRPRPP 377

Query: 368 STSSFNDNRDETASGLNWLRG 388
           S +   D    +A+ + W  G
Sbjct: 378 SETPDVDT--TSAASVFWDAG 396



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/97 (40%), Positives = 64/97 (65%), Gaps = 3/97 (3%)

Query: 671 QIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLV 730
           Q  Q+  +RT V++ +  +VGR++D++    Y++L  EL +MF I+G+ +   R+ W++V
Sbjct: 574 QSKQICRSRTKVQM-QGVAVGRAVDLTMLDGYDQLINELEEMFDIKGQLQH--RNKWEIV 630

Query: 731 FVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           F D E D++L+GDDPW  F + V  I I S +DV+KM
Sbjct: 631 FTDDEGDMMLVGDDPWPEFCNMVRRIFICSSQDVKKM 667


>gi|302398565|gb|ADL36577.1| ARF domain class transcription factor [Malus x domestica]
          Length = 712

 Score =  349 bits (896), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 180/371 (48%), Positives = 238/371 (64%), Gaps = 20/371 (5%)

Query: 2   IGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 61
           +G +  +  ELWHACAGPL+SLP  GT VVY PQGH EQV+       D        LPP
Sbjct: 32  LGSSASVCLELWHACAGPLISLPKKGTVVVYLPQGHLEQVSDFPTSAYD--------LPP 83

Query: 62  QLICQLHNVTMHADVETDEVYAQMTLQP---------LSPEEQKDTFVPIELGIPSKQPT 112
            L C++ +V +HA+  TD+V+AQ++L P         L  E   D    +E    S  P 
Sbjct: 84  HLFCRVVDVKLHAESGTDDVFAQVSLVPESEEIEHRLLEGETDADGEEDVEAMGKSTTP- 142

Query: 113 NYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFR 172
           + FCKTLTASDTSTHGGFSVPRRAAE  FP LD++ Q P+QEL+A+DLH +EW+FRHI+R
Sbjct: 143 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYTQQRPSQELVAKDLHGLEWRFRHIYR 202

Query: 173 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDS 232
           GQP+RHLLTTGWS FV+ K+LV+GD+VLF+  +  +L LGIRRA +  +      L S  
Sbjct: 203 GQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGIRRAAQVKSSATCPTLCSQQ 262

Query: 233 MHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFET 292
           ++   +    +A +T + F V++NPRAS SEF+IP  K+++++ H   S GMRF+M FET
Sbjct: 263 LNYSTVTDVVNAVSTKNAFNVYYNPRASSSEFIIPSRKFLRSLDHC-FSAGMRFKMRFET 321

Query: 293 EESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPM 352
           E+++ RRY G ITGI  LDP+RW  S W+ + V WD+     +  RVS WEIEP  +   
Sbjct: 322 EDAAERRYTGLITGIGALDPIRWPGSKWKCLVVRWDDIDT-SKHGRVSPWEIEPSGSVSS 380

Query: 353 YPSLFPLRLKR 363
             SL    LKR
Sbjct: 381 SHSLMGTGLKR 391


>gi|296086637|emb|CBI32272.3| unnamed protein product [Vitis vinifera]
          Length = 696

 Score =  349 bits (896), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 182/366 (49%), Positives = 239/366 (65%), Gaps = 5/366 (1%)

Query: 4   DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQL 63
           +N  L +ELW  CAGPLV++   G +VVYFPQGH EQV A TN++    +P Y NLP ++
Sbjct: 27  ENDDLYTELWLGCAGPLVNILRAGQKVVYFPQGHIEQVEAYTNQDGQMEMPIY-NLPSKI 85

Query: 64  ICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASD 123
            C++  V + A+  TDEV+AQ+TL P + +E +          P +  +  F KTLT SD
Sbjct: 86  FCKVVYVQLKAEACTDEVFAQVTLLPEAKQEWQSPDHGNSQFFPRRTHSYSFSKTLTPSD 145

Query: 124 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 183
           T+THGGFSVP+R A++  P LD + QPP QELIA+DLH  EW+FRHIFRGQPKRHLLT+G
Sbjct: 146 TNTHGGFSVPKRHADECLPPLDMTQQPPVQELIAKDLHGTEWRFRHIFRGQPKRHLLTSG 205

Query: 184 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAH 243
           WS FV++K+LVAGD+ +F+     +L +G+RRA R    + +SVLS  SM  G+LA+A H
Sbjct: 206 WSQFVTSKKLVAGDACIFLRGANGELRVGVRRATRLQNNVSASVLSGHSMQHGILASAFH 265

Query: 244 AAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGT 303
           A +T + FTV+F P  SP EF+IP  +Y+K+      SVG RFRMLFE EE S +R  GT
Sbjct: 266 AISTGTMFTVYFRPWTSP-EFIIPYDQYIKSA-ENNYSVGTRFRMLFEGEECSQQRCAGT 323

Query: 304 ITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTF-PMYPSLFP-LRL 361
           I GI D+D +RW NS WR  KV WD S       RV+ W IEP+      + S+ P L+ 
Sbjct: 324 IVGIEDVDAIRWPNSEWRRFKVQWDTSDITPCPERVAAWNIEPIEFIKKKHTSILPQLKR 383

Query: 362 KRPWHP 367
            RP  P
Sbjct: 384 ARPTDP 389



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 53/91 (58%), Gaps = 2/91 (2%)

Query: 678 TRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
            R+  KV K G+ +GRS+D++RF  Y+EL  EL QMF   G   D     W + + D E 
Sbjct: 601 VRSCTKVLKYGTALGRSIDLARFDGYDELIIELDQMFDFGGSLMDG-SCRWHVTYTDDEG 659

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           D++LLGD PW+ F S V  I I   E+ +++
Sbjct: 660 DMMLLGDYPWQEFRSMVQRIFICPKEETERL 690


>gi|359479836|ref|XP_002270286.2| PREDICTED: auxin response factor 23-like [Vitis vinifera]
          Length = 801

 Score =  349 bits (895), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 182/366 (49%), Positives = 239/366 (65%), Gaps = 5/366 (1%)

Query: 4   DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQL 63
           +N  L +ELW  CAGPLV++   G +VVYFPQGH EQV A TN++    +P Y NLP ++
Sbjct: 132 ENDDLYTELWLGCAGPLVNILRAGQKVVYFPQGHIEQVEAYTNQDGQMEMPIY-NLPSKI 190

Query: 64  ICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASD 123
            C++  V + A+  TDEV+AQ+TL P + +E +          P +  +  F KTLT SD
Sbjct: 191 FCKVVYVQLKAEACTDEVFAQVTLLPEAKQEWQSPDHGNSQFFPRRTHSYSFSKTLTPSD 250

Query: 124 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 183
           T+THGGFSVP+R A++  P LD + QPP QELIA+DLH  EW+FRHIFRGQPKRHLLT+G
Sbjct: 251 TNTHGGFSVPKRHADECLPPLDMTQQPPVQELIAKDLHGTEWRFRHIFRGQPKRHLLTSG 310

Query: 184 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAH 243
           WS FV++K+LVAGD+ +F+     +L +G+RRA R    + +SVLS  SM  G+LA+A H
Sbjct: 311 WSQFVTSKKLVAGDACIFLRGANGELRVGVRRATRLQNNVSASVLSGHSMQHGILASAFH 370

Query: 244 AAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGT 303
           A +T + FTV+F P  SP EF+IP  +Y+K+      SVG RFRMLFE EE S +R  GT
Sbjct: 371 AISTGTMFTVYFRPWTSP-EFIIPYDQYIKSA-ENNYSVGTRFRMLFEGEECSQQRCAGT 428

Query: 304 ITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTF-PMYPSLFP-LRL 361
           I GI D+D +RW NS WR  KV WD S       RV+ W IEP+      + S+ P L+ 
Sbjct: 429 IVGIEDVDAIRWPNSEWRRFKVQWDTSDITPCPERVAAWNIEPIEFIKKKHTSILPQLKR 488

Query: 362 KRPWHP 367
            RP  P
Sbjct: 489 ARPTDP 494



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 53/91 (58%), Gaps = 2/91 (2%)

Query: 678 TRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
            R+  KV K G+ +GRS+D++RF  Y+EL  EL QMF   G   D     W + + D E 
Sbjct: 706 VRSCTKVLKYGTALGRSIDLARFDGYDELIIELDQMFDFGGSLMDG-SCRWHVTYTDDEG 764

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           D++LLGD PW+ F S V  I I   E+ +++
Sbjct: 765 DMMLLGDYPWQEFRSMVQRIFICPKEETERL 795


>gi|225030806|gb|ACN79516.1| auxin response factor 3b [Lotus japonicus]
          Length = 718

 Score =  349 bits (895), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 181/350 (51%), Positives = 233/350 (66%), Gaps = 22/350 (6%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
           CL  ELWHACAGPL+SLP  G+ VVY PQGH EQ         D  +  Y N+P  + C+
Sbjct: 47  CL--ELWHACAGPLISLPKKGSVVVYIPQGHFEQAQ-------DFPVTAY-NIPTHVFCR 96

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQK---------DTFVPIELGIPSKQPTNYFCK 117
           + +V +HA+  +DEVY Q+ L P S + +K         D     E  + S  P + FCK
Sbjct: 97  VLDVKLHAEEGSDEVYCQVLLIPESEQVEKNLGEGDTDADGEEDTEAMVKSTTP-HMFCK 155

Query: 118 TLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKR 177
           TLTASDTSTHGGFSVPRRAAE  FP LD+S Q P+QEL+A+DLH +EWKFRHI+RGQP+R
Sbjct: 156 TLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGLEWKFRHIYRGQPRR 215

Query: 178 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGL 237
           HLLTTGWS FV+ K+LV+GD+VLF+  +  +L LGIRRA +  +V   +  S   +  G 
Sbjct: 216 HLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGIRRAAQLKSVGSFAAPSGQHLSPGT 275

Query: 238 LAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSV 297
           L   A+A ++   F+  +NPR S SEF+IP+ K++K++     SVGMRFRM FETE+S+ 
Sbjct: 276 LMDVANALSSRCAFSACYNPRVSSSEFIIPVNKFMKSL-DCSYSVGMRFRMRFETEDSAE 334

Query: 298 RRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 347
           RR+ G + GISD+DPVRW  S WR + V WD+  AG R  RVS WEIEP 
Sbjct: 335 RRFTGLVLGISDVDPVRWPGSKWRCLLVRWDDIEAG-RHNRVSPWEIEPF 383


>gi|379323218|gb|AFD01308.1| auxin response factor 9 [Brassica rapa subsp. pekinensis]
          Length = 629

 Score =  348 bits (894), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 180/370 (48%), Positives = 243/370 (65%), Gaps = 21/370 (5%)

Query: 11  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYP--NLPPQLICQLH 68
           ELW  CAGP+V +P    RV YFPQGH EQ+ A+T +++++  P  P  +LPP+++C++ 
Sbjct: 10  ELWKLCAGPVVDVPQAAERVFYFPQGHMEQLEASTQQDLNAVKPTKPLFDLPPKILCRVM 69

Query: 69  NVTMHADVETDEVYAQMTL-------QPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTA 121
           +V + A+ +TDEVYAQ+ L       +P+SP+       P E   P     + F K LTA
Sbjct: 70  DVRLQAEKDTDEVYAQIMLMPEGTVDEPMSPDPS-----PPESQRPK---VHSFSKVLTA 121

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSV R+ A +  P LD + Q P QEL+A D+H  +WKF+HIFRGQP+RHLLT
Sbjct: 122 SDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRHLLT 181

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWS FV+AKRLVAGD+ +F+  E  +L +G+RRA R  T MPSSV+SS SMH+G+LA A
Sbjct: 182 TGWSTFVTAKRLVAGDTFVFLRGENGELRVGVRRANRQQTNMPSSVISSHSMHLGVLATA 241

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
            HA  T S FTV++ PR   S+F+I L KY++A+   + SVG+RF+M FE E+S  RR+ 
Sbjct: 242 CHATQTRSMFTVYYKPRT--SQFIISLNKYLEAM-SNKFSVGIRFKMRFEGEDSPERRFS 298

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRL 361
           GT+ G+ D     W +S+WR ++V WDE  +  R  +VS WEIEP  T    P     + 
Sbjct: 299 GTVVGVKDCS-THWKDSNWRCLEVHWDEPASISRPDKVSPWEIEPFVTSENVPHSVMPKN 357

Query: 362 KRPWHPSTSS 371
           KRP H S  S
Sbjct: 358 KRPRHYSEVS 367



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 40/98 (40%), Positives = 65/98 (66%), Gaps = 3/98 (3%)

Query: 671 QIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQL 729
           Q  +++ TR+  KV   G  VGR++D++  + Y+EL ++L ++F IEG+ +   R+ W++
Sbjct: 505 QSKEISSTRSRTKVQMQGVPVGRAVDLTVLNGYSELIDDLEKLFDIEGELKS--RNQWEI 562

Query: 730 VFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           VF D E D++L+GDDPW  F + V  I I S E+V+KM
Sbjct: 563 VFTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKM 600


>gi|320117915|gb|ADW11246.1| putative auxin response factor [Gossypium hirsutum]
          Length = 672

 Score =  348 bits (892), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 180/343 (52%), Positives = 243/343 (70%), Gaps = 5/343 (1%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           L  ELWHACAGPLV+LP VG RV YFPQGH EQ+ A+ ++ ++  +P++ +LP +++C++
Sbjct: 19  LYRELWHACAGPLVTLPRVGERVYYFPQGHMEQLEASMHQGLEHQMPSF-DLPSKILCKV 77

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIE-LGIPSKQPTNYFCKTLTASDTST 126
            +V   A+ +TDEVYAQ+TL P    +Q +   P + L  P +   + FCKTLTASDTST
Sbjct: 78  ASVQRKAEPDTDEVYAQITLVPEV--DQSEVMSPDDPLQEPERCIVHSFCKTLTASDTST 135

Query: 127 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 186
           HGGFSV RR A+   P LD + QPP QELIA DLH  EW FRHI RGQP+RHLLTTGWSV
Sbjct: 136 HGGFSVLRRHADDCLPPLDMTQQPPWQELIATDLHGNEWHFRHIRRGQPRRHLLTTGWSV 195

Query: 187 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 246
           FVS+K+LVAGD+++F+      L +G+RR +R    MPSSV+SS S+ +G+LA A++A +
Sbjct: 196 FVSSKKLVAGDALIFLRGANGDLRVGVRRLMRQQANMPSSVISSHSIILGVLATASYALS 255

Query: 247 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 306
           T S F++F+ PR S SEF++ + KY++A  H ++SVGMRF+M FE EE   RR+ GTI G
Sbjct: 256 TRSMFSIFYKPRTSLSEFIVSVNKYLEARSH-KLSVGMRFKMRFEGEEVPERRFSGTIVG 314

Query: 307 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT 349
           +       W++S WRS+KV WDE ++  R  RVS WE+EPL  
Sbjct: 315 VEADKSSGWADSEWRSLKVQWDEPSSIIRPDRVSPWELEPLVA 357



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 61/90 (67%), Gaps = 3/90 (3%)

Query: 679 RTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 737
           R+  KV+  G +VGR++D++RF  Y +L ++L  MF I+G+     ++ WQ+V+ D E+D
Sbjct: 546 RSCTKVHMQGMAVGRAVDLTRFDCYEDLLKKLEYMFDIKGQLCGSTKN-WQVVYTDDEDD 604

Query: 738 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           ++++GDDPW  F S V  I I + E+V+K+
Sbjct: 605 MMMVGDDPWNEFCSMVRKI-IYTSEEVRKL 633


>gi|225030808|gb|ACN79517.1| auxin response factor 4 [Lotus japonicus]
          Length = 771

 Score =  347 bits (891), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 185/374 (49%), Positives = 240/374 (64%), Gaps = 27/374 (7%)

Query: 11  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 70
           ELWHACAGPL SLP  G  VVYFPQGH EQ AA+ +      +P Y +L PQ+ C++ NV
Sbjct: 44  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQ-AASFSPFSPLDVPTY-DLHPQIFCKVANV 101

Query: 71  TMHADVETDEVYAQMTLQP--------LSPEEQKDTFVPIELG--IPSKQPTNYFCKTLT 120
            + A+ E DEVY Q+TL P        L  +E +     +E     P+K   + FCKTLT
Sbjct: 102 QLLANKENDEVYTQVTLLPQAELEGIYLEGKELEGVGEDVEGNGKTPAKSTPHMFCKTLT 161

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
           ASDTSTHGGFSVPRRAAE  FP L    Q P+QEL+A+DLH VEWKFRHI+RGQP+RHLL
Sbjct: 162 ASDTSTHGGFSVPRRAAEDCFPPL----QRPSQELVAKDLHGVEWKFRHIYRGQPRRHLL 217

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 240
           TTGWS+FVS K+LV+GD+VLF+  E  +L LGIRRA RP   +P S++ + S +   L++
Sbjct: 218 TTGWSIFVSQKKLVSGDAVLFLRGENGELRLGIRRAARPRNGLPESIVGNQSCYPNFLSS 277

Query: 241 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 300
            A+A +  S F VF++PRAS ++FV+P  KYV+++    V+VG RF+M F+ +ES  RR 
Sbjct: 278 VANAISARSMFHVFYSPRASHADFVVPYHKYVRSI-KNPVTVGTRFKMKFDMDESPERRS 336

Query: 301 M----------GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTF 350
                      G +TG+SDLDP +W  S WR + V WDE      Q RVS WE++P  + 
Sbjct: 337 TTAVTINRCSSGIVTGMSDLDPYKWPKSKWRCLMVRWDEIVETNHQDRVSPWEVDPSASL 396

Query: 351 PMYPSLFPLRLKRP 364
                    RLK+P
Sbjct: 397 SPLSIQASRRLKKP 410



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 53/135 (39%), Positives = 80/135 (59%), Gaps = 3/135 (2%)

Query: 635 TSVDPGVSSMPLGDSGFHNSMYGCMQDSSELL-HNVGQIDQLTPTRTFVKVYKSGS-VGR 692
           T+   G +   L D  F   +  C      L   +  Q  Q T  R+  KV+K GS VGR
Sbjct: 598 TAASLGANIRILNDDNFDGKVNACKLFGFPLSGESTSQNLQNTAKRSCTKVHKQGSLVGR 657

Query: 693 SLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSN 752
           ++D+SR SSYN+L  EL ++F +EG   +P + GW++++ DREND++++GDDPW  F + 
Sbjct: 658 AIDLSRLSSYNDLLSELERLFSMEGLLREPDK-GWRVLYTDRENDIMVVGDDPWHEFCNV 716

Query: 753 VWYIKILSPEDVQKM 767
           V  I I + E+V+KM
Sbjct: 717 VSKIHIYTQEEVEKM 731


>gi|224072228|ref|XP_002303662.1| predicted protein [Populus trichocarpa]
 gi|222841094|gb|EEE78641.1| predicted protein [Populus trichocarpa]
          Length = 575

 Score =  347 bits (891), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 183/343 (53%), Positives = 242/343 (70%), Gaps = 8/343 (2%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           L +ELW ACAGPLV +P  G RV YFPQGH EQ+ A+TN+E++  +P + NLP +++C++
Sbjct: 17  LYTELWKACAGPLVDVPKRGERVFYFPQGHMEQLEASTNQELNQRVPLF-NLPSKILCRV 75

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNY-FCKTLTASDTST 126
            N  + A+ ETDEVYAQ+TL P S  +Q +T  P        +PT + FCK LTASDTST
Sbjct: 76  INTQLLAEQETDEVYAQITLLPES--DQIETTSPDPCPSEPPRPTVHSFCKVLTASDTST 133

Query: 127 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 186
           HGGFSV R+ A +  P LD     P QEL+A+DLH  EW+F+HIFRGQP+RHLLTTGWS 
Sbjct: 134 HGGFSVLRKHASECLPPLDMIQPIPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 193

Query: 187 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 246
           FV++KRLVAGDS +F+  E  +L +G+RR  R  + MPSSV+SS SMH+G+LA A+HA +
Sbjct: 194 FVTSKRLVAGDSFVFLRGENGELRVGVRRVARQQSSMPSSVISSQSMHLGVLATASHAIS 253

Query: 247 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 306
           T + F V++ PR   S+F+I L KY++AV + + +VGMRF+M FE E+S  RR+ GTI G
Sbjct: 254 TLTLFVVYYKPRT--SQFIISLNKYLEAV-NNKFAVGMRFKMRFEGEDSPERRFSGTIVG 310

Query: 307 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT 349
           + D  P  W++S WRS+KV WDE  +  R  RVS WEIEP   
Sbjct: 311 VEDFSP-HWNDSKWRSLKVQWDEPASISRPDRVSPWEIEPCVA 352



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 39/93 (41%), Positives = 59/93 (63%), Gaps = 3/93 (3%)

Query: 676 TPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDR 734
           T TR+  KV   G +VGR++D++    Y +L +EL Q+F I+G+     R  W++V+ D 
Sbjct: 479 TSTRSRTKVQLQGIAVGRAVDLTLIKGYGQLIDELEQLFDIKGQLHP--RDKWEIVYTDD 536

Query: 735 ENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           E D++L+GDDPW  F + V  I I S +DV+KM
Sbjct: 537 EGDMMLVGDDPWPEFCNMVRRIFICSSQDVKKM 569


>gi|357469307|ref|XP_003604938.1| Auxin response factor [Medicago truncatula]
 gi|355505993|gb|AES87135.1| Auxin response factor [Medicago truncatula]
          Length = 666

 Score =  346 bits (888), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 187/381 (49%), Positives = 255/381 (66%), Gaps = 9/381 (2%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
           C + ELW A AGPLV +P VG  V YFPQGH EQ+ A+TN+E++  IP    LP +++C+
Sbjct: 15  CSDEELWKAIAGPLVDVPCVGQSVFYFPQGHMEQLEASTNQELNQRIPVL-KLPTKILCR 73

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 126
           + N+ + A+ ETDEVYAQ+TL P S + +     P    +P +   + FCK LTASDTST
Sbjct: 74  IVNIHLLAEQETDEVYAQITLVPESNQNEPTIPDPPTEELP-RPKIHSFCKILTASDTST 132

Query: 127 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 186
           HGGFSV R+ A +  P LD S   P QEL+A+DLH  EW+F+HIFRGQP+RHLLTTGWS 
Sbjct: 133 HGGFSVLRKHATECLPPLDMSQPTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 192

Query: 187 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 246
           FV++KRLVAGD+ +F+  E  +L +G+RR  R  + MPSSV+SS SMH+G+LA A+HA A
Sbjct: 193 FVTSKRLVAGDTFVFL-GENGELRVGVRRLARQSSSMPSSVISSQSMHLGVLATASHAVA 251

Query: 247 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEES--SVRRYMGTI 304
           T + F V++ PR   S+F++ + KY+ AV + + +VGMRFRM FE+++S  S +R+ GTI
Sbjct: 252 TQTLFVVYYKPRT--SQFIVSVNKYLSAVSN-KFAVGMRFRMRFESDDSAESDKRFSGTI 308

Query: 305 TGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRP 364
            G+ D+ P  W+NS WRS+KV WDE +A  R  RVS WEIEP  +     ++ P   K  
Sbjct: 309 VGVEDISP-HWANSKWRSLKVQWDEPSAITRPDRVSPWEIEPFVSSASTATVQPTAAKTK 367

Query: 365 WHPSTSSFNDNRDETASGLNW 385
               TS   D    +A+ + W
Sbjct: 368 RPRPTSEIPDVDTTSAASIFW 388



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 61/91 (67%), Gaps = 3/91 (3%)

Query: 678 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           +R+  KV   G +VGR++D++  + Y++L  EL ++F I+G+ +   R+ W++VF D E 
Sbjct: 553 SRSRTKVQMQGVAVGRAVDLATLNGYDQLIGELEELFDIKGQLQH--RNTWEIVFTDDEG 610

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           D++L+GDDPW  F + V  I I S +DV+KM
Sbjct: 611 DMMLVGDDPWPEFCNMVRRIFICSSQDVKKM 641


>gi|449530666|ref|XP_004172315.1| PREDICTED: auxin response factor 1-like, partial [Cucumis sativus]
          Length = 335

 Score =  345 bits (886), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 172/318 (54%), Positives = 229/318 (72%), Gaps = 3/318 (0%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
            L  ELWHACAGPLV+LP    RV YFPQGH EQ+ A+ ++ ++  +P++ NLP +++C+
Sbjct: 21  ALYRELWHACAGPLVTLPRQDERVYYFPQGHMEQLEASMHQGLEQQMPSF-NLPSKILCK 79

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 126
           + NV + A+ +TDEVYAQ+TL P S + +  +  P  L  P++   + FCKTLTASDTST
Sbjct: 80  VVNVVLRAESDTDEVYAQITLLPESNQNEVTSPDP-PLPEPTRCNVHSFCKTLTASDTST 138

Query: 127 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 186
           HGGFSV RR A+   P LD S QPP QEL+A DLH  +W FRHIFRGQP+RHLLTTGWSV
Sbjct: 139 HGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNQWHFRHIFRGQPRRHLLTTGWSV 198

Query: 187 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 246
           FVS+K+LVAGD+ +F+  E  +L +G+RR +R    MPSSV+SS SMH+G+LA A+HA +
Sbjct: 199 FVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHSMHLGVLATASHAIS 258

Query: 247 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 306
           T + F+VF+ PR S S F++ L KY++A  H ++SVGMRF+M FE EE   R + GTI G
Sbjct: 259 TGTLFSVFYKPRTSRSTFLVSLNKYLEAQNH-KLSVGMRFKMRFEGEEVPERSFSGTIVG 317

Query: 307 ISDLDPVRWSNSHWRSVK 324
           + D     W+NS WRS+K
Sbjct: 318 LGDNASPGWANSEWRSLK 335


>gi|147770011|emb|CAN65414.1| hypothetical protein VITISV_009739 [Vitis vinifera]
          Length = 831

 Score =  344 bits (883), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 188/383 (49%), Positives = 239/383 (62%), Gaps = 61/383 (15%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYP----NLPPQ 62
           CL  ELWHACAGPL+SLP  G+ VVYFPQGH EQ++            +YP    +LPP 
Sbjct: 47  CL--ELWHACAGPLISLPKKGSLVVYFPQGHLEQLS------------DYPAVAYDLPPH 92

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQK----------DTFVPIELGIPSKQPT 112
           + C++ +V +HA+V TDEVYAQ++L P +  +QK               IE  I S  P 
Sbjct: 93  VFCRVVDVKLHAEVVTDEVYAQVSLVPETKIKQKLQEGEIEADGGEEEDIEGSIKSMTP- 151

Query: 113 NYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFR 172
           + FCKTLTASDTSTHGGFSVPRRAAE  FP LD+  Q P+QEL+A+DLH  EW+FRHI+R
Sbjct: 152 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGFEWRFRHIYR 211

Query: 173 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDS 232
           GQP+RHLLTTGWS FV+ K+LV+GD+VLF+     +L LGIRRA +     P   L S  
Sbjct: 212 GQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGGDGELRLGIRRAAQIKGSSPFPALCSQQ 271

Query: 233 MHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFET 292
           +++  L A  +A +T S F + +NPRAS SEF+IPL K+ K++ H+  S GMRF+M  ET
Sbjct: 272 LNLNTLTAVVNAISTRSVFNICYNPRASSSEFIIPLRKFSKSIDHS-FSAGMRFKMRVET 330

Query: 293 EESSVRRYMGTITGISDLDPVRWSNSHWR------------------------------S 322
           E+++ RRY G ITGISD+DPVRW  S WR                              S
Sbjct: 331 EDAAERRYTGLITGISDMDPVRWPGSKWRCLLLHHSHGSECVLLPCLPYYSDSATFFDLS 390

Query: 323 VKVGWDESTAGERQPRVSLWEIE 345
           ++V WD+  A  R  RVS WEIE
Sbjct: 391 LQVRWDDIEA-NRHNRVSPWEIE 412


>gi|302190092|dbj|BAJ14105.1| auxin response factor 3 [Juncus prismatocarpus subsp.
           leschenaultii]
          Length = 550

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 204/468 (43%), Positives = 282/468 (60%), Gaps = 50/468 (10%)

Query: 4   DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAAT-TNKEVDSHIPNYPNLPPQ 62
           D + +N ELWHACAGP+VSLP  G+ VVYFPQGH EQ+         D+       LPP 
Sbjct: 17  DREAVNIELWHACAGPVVSLPKKGSVVVYFPQGHLEQIGCHFVGLSADA-------LPPH 69

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTF--------------VPIELGIPS 108
           +  ++ +VT+ ADV TDEVYAQ++L PLS EE++                    +LG P+
Sbjct: 70  VFSRVVHVTLMADVGTDEVYAQLSLMPLSEEERQSHLNFEEEGDGEEKEREESDKLG-PT 128

Query: 109 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFR 168
           K P + FCKTLTASDTSTHGGFSVPRRAAE  FP LD+  Q P QEL+A+DLH  EW+FR
Sbjct: 129 KIP-HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPTQELVAKDLHGTEWRFR 187

Query: 169 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVL 228
           HI+RGQP+RHLLTTGWS FV+ K+LV+GD+VLF+  +  +L LGIRRA++  +    ++ 
Sbjct: 188 HIYRGQPRRHLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGIRRAVQLKSTNFPAIQ 247

Query: 229 SSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM 288
           +S+  +I      A A +  S F + +NPR   SEF++P  K++K+ F+  +S+G RF+M
Sbjct: 248 NSNISNI------AQAISKKSLFHICYNPRDGQSEFIVPYWKFMKS-FNHPISIGTRFKM 300

Query: 289 LFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 348
            FE+E++S RRY G ITGISD+DP+RW  S WR + V WDE+    RQ RVS WEIE   
Sbjct: 301 NFESEDASERRYNGLITGISDMDPLRWPGSKWRCLLVRWDENGECIRQNRVSPWEIELTG 360

Query: 349 TFP---MYPSLFPLRLKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGM 405
           T     M P+    RLK P  P+ +  N++ D       + +   G++   +L F+S   
Sbjct: 361 TVSQGMMAPN--SKRLK-PCTPTITGNNNSSDYLEPSGRFQKVLQGQE--MSLGFKS--- 412

Query: 406 FPWMQQRVEPSFLGNDHNQQYQAMLAAGMQSGDPVRQQFMQLQQPFQY 453
            PW +  +  +       Q + A+   G   G P   Q  ++  P+ +
Sbjct: 413 -PWDRIPITST-------QPFCAVYTTGASLGFPKVLQGQEILPPYNH 452


>gi|224128584|ref|XP_002320368.1| predicted protein [Populus trichocarpa]
 gi|222861141|gb|EEE98683.1| predicted protein [Populus trichocarpa]
          Length = 392

 Score =  343 bits (881), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 173/350 (49%), Positives = 239/350 (68%), Gaps = 15/350 (4%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQV-----AATTNKEVDSHIPNYPNLPPQ 62
           L +ELWHACAGPLV +P  G +V YFPQGH EQV     AA  N+E    +P Y +LP +
Sbjct: 2   LYTELWHACAGPLVYVPRAGDKVFYFPQGHMEQVLLSTVAARMNEEGKMEMPIY-DLPYK 60

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQ----KDTFVPIELGIPSKQPTNYFCKT 118
           ++C++ +V + A+  TDEV+A++TL P++ E++    KD      L +  K     F K 
Sbjct: 61  ILCKVVHVELKAEAGTDEVFARITLLPVAEEDELSSNKDG---KSLPLHRKTCARSFTKK 117

Query: 119 LTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRH 178
           LT SDT THGGFSVP+R A++  P LD S QPP QEL+A+DLH  EW F+HI+RGQPKRH
Sbjct: 118 LTPSDTKTHGGFSVPKRHADQCLPPLDKSQQPPVQELLAKDLHGFEWCFKHIYRGQPKRH 177

Query: 179 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLL 238
           L+T+GWS FVS+KRLVAGDS +F+  E  +L +G+RRA++    + +++LSS SM +G+L
Sbjct: 178 LITSGWSTFVSSKRLVAGDSFIFLRGESGELRVGVRRAMKLENNLSANILSSHSMQLGIL 237

Query: 239 AAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVR 298
           ++A+HA  T S FT++F+P  SP+EF+IP  +Y+K+      S G RFRMLFE EE + +
Sbjct: 238 SSASHAITTGSMFTIYFHPWTSPAEFIIPYDQYMKSA-EIDYSAGTRFRMLFEGEECAEQ 296

Query: 299 RYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAG-ERQPRVSLWEIEPL 347
           R+ GT+ G  D+D +RW NS WR +KV WD ++     Q RVS W IEP+
Sbjct: 297 RFEGTVVGTEDVDHIRWPNSEWRILKVKWDAASEPFVHQERVSPWNIEPI 346


>gi|449528515|ref|XP_004171249.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 3-like
           [Cucumis sativus]
          Length = 730

 Score =  343 bits (881), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 176/366 (48%), Positives = 239/366 (65%), Gaps = 22/366 (6%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYP-NLPPQLIC 65
           CL  ELWHACAGPL SLP  G+ VVY PQGH EQ+            P  P +LPP ++C
Sbjct: 44  CL--ELWHACAGPLTSLPKKGSLVVYLPQGHFEQM---------QEFPPTPYDLPPHILC 92

Query: 66  QLHNVTMHADVETDEVYAQMTLQP--------LSPEEQKDTFVPIELGIPSKQPTNYFCK 117
           ++ +V +HA+  +DEVYAQ++L P        +  E   D+              + FCK
Sbjct: 93  RVIDVQLHAEAGSDEVYAQVSLFPENEQMEHKMQEEMNNDSEEEDVEEGEKTTTPHMFCK 152

Query: 118 TLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKR 177
           TLTASDTSTHGGFSVPRRAAE  FP LD++ Q P+QEL+A+DL  ++WKFRHI+RGQP+R
Sbjct: 153 TLTASDTSTHGGFSVPRRAAEDCFPPLDYNQQRPSQELVAKDLLGLKWKFRHIYRGQPRR 212

Query: 178 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGL 237
           HLLTTGWS FV+ KRLV+GD+VLF+     +L LGIRRA +  +    S + S  ++   
Sbjct: 213 HLLTTGWSAFVNKKRLVSGDAVLFLRGNDGELRLGIRRAAQLKSGSAFSNICSQQLNSSS 272

Query: 238 LAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSV 297
           +    +A ++ S F+V +NPRA+ S+FV+P  K++K++ H+  SVG+RFR+ FET++ + 
Sbjct: 273 IMDVVNAVSSKSSFSVCYNPRAASSQFVLPFHKFLKSINHS-FSVGLRFRLSFETDDGAD 331

Query: 298 RRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLF 357
           RR+ G ITG+SD+DP+RW  S WRS+ V WD+     R  RVS WEIEP  +  +  +L 
Sbjct: 332 RRHTGHITGVSDVDPIRWPGSRWRSLMVRWDDGET-NRHGRVSPWEIEPSGSVSLSTNLV 390

Query: 358 PLRLKR 363
           P  LKR
Sbjct: 391 PPGLKR 396


>gi|356549269|ref|XP_003543018.1| PREDICTED: auxin response factor 3-like [Glycine max]
          Length = 736

 Score =  343 bits (881), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 181/375 (48%), Positives = 240/375 (64%), Gaps = 39/375 (10%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYP----NLPPQ 62
           CL  ELWHACAGPL+SLP  G+ VVY PQGH E            H+ ++P    ++PP 
Sbjct: 51  CL--ELWHACAGPLISLPKKGSVVVYLPQGHFE------------HVQDFPVTAYDIPPH 96

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPE--------------EQKDTFVPIELGIPS 108
           + C++ +V +HA+  +DEVY Q+ L P S +              E++DT   ++   P 
Sbjct: 97  VFCRVLDVKLHAEEGSDEVYCQVLLVPESEQVEQSLREGEIVADGEEEDTEAIVKSTTP- 155

Query: 109 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFR 168
               + FCKTLTASDTSTHGGFSVPRRAAE  FP LD+S Q P+QEL+A+DLH +EW+FR
Sbjct: 156 ----HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGLEWRFR 211

Query: 169 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVL 228
           HI+RGQP+RHLLTTGWS FV+ K+LV+GD+VLF+  +  +L LGIRRA +  +    +V 
Sbjct: 212 HIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGIRRAAQLKSAGSFAVP 271

Query: 229 SSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM 288
           S   ++   L    +A +T   F+V +NPR S SEF+IP+ K++K++     SVGMRFRM
Sbjct: 272 SGQQLNPATLKGVVNALSTRCAFSVCYNPRFSSSEFIIPVHKFLKSL-DCSYSVGMRFRM 330

Query: 289 LFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 348
            FETE+++ RR  G I GISD+DPVRW  S WR + V WD+  A  R  RVS WEIEP  
Sbjct: 331 RFETEDAAERRCTGLIAGISDVDPVRWLGSKWRCLLVRWDDIEAARRN-RVSPWEIEPSG 389

Query: 349 TFPMYPSLFPLRLKR 363
           +     +L    LKR
Sbjct: 390 SASNSSNLMSAGLKR 404


>gi|449433792|ref|XP_004134681.1| PREDICTED: auxin response factor 3-like [Cucumis sativus]
          Length = 731

 Score =  343 bits (880), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 176/366 (48%), Positives = 239/366 (65%), Gaps = 22/366 (6%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYP-NLPPQLIC 65
           CL  ELWHACAGPL SLP  G+ VVY PQGH EQ+            P  P +LPP ++C
Sbjct: 44  CL--ELWHACAGPLTSLPKKGSLVVYLPQGHFEQM---------QEFPPTPYDLPPHILC 92

Query: 66  QLHNVTMHADVETDEVYAQMTLQP--------LSPEEQKDTFVPIELGIPSKQPTNYFCK 117
           ++ +V +HA+  +DEVYAQ++L P        +  E   D+              + FCK
Sbjct: 93  RVIDVQLHAEAGSDEVYAQVSLFPENEQMEHKMQEEMNNDSEEEDVEEGEKTTTPHMFCK 152

Query: 118 TLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKR 177
           TLTASDTSTHGGFSVPRRAAE  FP LD++ Q P+QEL+A+DL  ++WKFRHI+RGQP+R
Sbjct: 153 TLTASDTSTHGGFSVPRRAAEDCFPPLDYNQQRPSQELVAKDLLGLKWKFRHIYRGQPRR 212

Query: 178 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGL 237
           HLLTTGWS FV+ KRLV+GD+VLF+     +L LGIRRA +  +    S + S  ++   
Sbjct: 213 HLLTTGWSAFVNKKRLVSGDAVLFLRGNDGELRLGIRRAAQLKSGSAFSNICSQQLNSSS 272

Query: 238 LAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSV 297
           +    +A ++ S F+V +NPRA+ S+FV+P  K++K++ H+  SVG+RFR+ FET++ + 
Sbjct: 273 IMDVVNAVSSKSSFSVCYNPRAASSQFVLPFHKFLKSINHS-FSVGLRFRLSFETDDGAD 331

Query: 298 RRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLF 357
           RR+ G ITG+SD+DP+RW  S WRS+ V WD+     R  RVS WEIEP  +  +  +L 
Sbjct: 332 RRHTGHITGVSDVDPIRWPGSRWRSLMVRWDDGET-NRHGRVSPWEIEPSGSVSLSTNLV 390

Query: 358 PLRLKR 363
           P  LKR
Sbjct: 391 PPGLKR 396


>gi|222619803|gb|EEE55935.1| hypothetical protein OsJ_04626 [Oryza sativa Japonica Group]
          Length = 856

 Score =  342 bits (877), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 180/364 (49%), Positives = 244/364 (67%), Gaps = 14/364 (3%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           L  ELWHACAGPLV++P VG  V YFPQGH EQV A+ N+  DS +  Y +LP +L+C++
Sbjct: 16  LYDELWHACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVADSQMRLY-DLPSKLLCRV 74

Query: 68  HNVTMHADVETDEVYAQMTLQP------LSPEEQKDTFVPIELGIPSKQPTNYFCKTLTA 121
            NV + A+ +TDEVYAQ+ L P      ++ E+   T  P++   P + P+      LT 
Sbjct: 75  LNVELKAEQDTDEVYAQVMLMPEPEQNEMAVEKTTPTSGPVQARPPGEGPSARRSPRLTP 134

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           + T+     +    +A    P  D +  PP QEL+A+DLH ++W+FRHIFRGQP+RHLL 
Sbjct: 135 ARTAASLYSAATLMSAS--LPWYDMTQSPPTQELVAKDLHSMDWRFRHIFRGQPRRHLLQ 192

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           +GWSVFVS+KRLVAGD+ +F+  E  +L +G+RRA+R  + +PSSV+SS SMH+G+LA A
Sbjct: 193 SGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVLATA 252

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
            HA  T S FTV++ PR SPSEF+IP  +Y+++V     SVGMRFRM FE EE+  +R+ 
Sbjct: 253 WHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESV-KNNYSVGMRFRMRFEGEEAPEQRFT 311

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL-R 360
           GTI G  +LDPV W  S WRS+KV WDE +   R  RVS W+IEP ++ P+ P   PL R
Sbjct: 312 GTIIGSENLDPV-WPESSWRSLKVRWDEPSTIPRPDRVSPWKIEPASSPPVNP--LPLSR 368

Query: 361 LKRP 364
           +KRP
Sbjct: 369 VKRP 372



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 52/134 (38%), Positives = 82/134 (61%), Gaps = 4/134 (2%)

Query: 660 QDSSELLHNVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGK 718
           Q + +   +V    Q+  TR+  KV+K G ++GRS+D+S+FS+Y+EL+ EL +MF  +G+
Sbjct: 670 QQAQQSSKDVQSKTQVASTRSCTKVHKQGVALGRSVDLSKFSNYDELKAELDKMFEFDGE 729

Query: 719 FEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPS 778
                ++ WQ+V+ D E D++L+GDDPWE F S V  I I + E+VQKM  +        
Sbjct: 730 LVSSNKN-WQIVYTDNEGDMMLVGDDPWEEFCSIVRKIYIYTKEEVQKMNSKSNAPRKDD 788

Query: 779 SGQRANSRGNCGRD 792
           S +  N +G+  RD
Sbjct: 789 SSE--NEKGSVKRD 800


>gi|356548656|ref|XP_003542716.1| PREDICTED: auxin response factor 3-like [Glycine max]
          Length = 714

 Score =  341 bits (875), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 179/371 (48%), Positives = 236/371 (63%), Gaps = 29/371 (7%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
           CL  ELWHACAGP++SLP  G+ VVYFPQGH EQ         D  +P   N+P  + C+
Sbjct: 31  CL--ELWHACAGPMISLPKKGSVVVYFPQGHLEQHLH------DFPLPASANIPSHVFCR 82

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPE--------------EQKDTFVPIELGIPSKQPT 112
           + +V +HA+  +DEVY Q+ L P S +              E++D    ++   P     
Sbjct: 83  VLDVKLHAEEGSDEVYCQVVLVPESEQVQQKLREGEFDADGEEEDAEAVMKSTTP----- 137

Query: 113 NYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFR 172
           + FCKTLTASDTSTHGGFSVPRRAAE  FP LD+S Q P+QEL+A+DLH  EW+FRHI+R
Sbjct: 138 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGQEWRFRHIYR 197

Query: 173 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDS 232
           GQP+RHLLTTGWS FV+ K+LV+GD+VLF+  E  +L LGIRRA +  +    S LS   
Sbjct: 198 GQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGELRLGIRRAAQLKSGSTFSALSGQQ 257

Query: 233 MHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFET 292
                L    +A +    F++ +NPR S SEF+IP+ ++VK++ ++  S GMRFRM FET
Sbjct: 258 GSPTSLMDVVNALSARCAFSIHYNPRVSSSEFIIPIHRFVKSLDYS-YSAGMRFRMRFET 316

Query: 293 EESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPM 352
           E+++ RR+ G I GI+D+DPVRW  S WR + V WD+  A  R  RVS WEIEP  +   
Sbjct: 317 EDAAERRFTGLIVGIADVDPVRWPGSRWRCLMVRWDDLEA-TRHNRVSPWEIEPSGSAST 375

Query: 353 YPSLFPLRLKR 363
             +L    LKR
Sbjct: 376 ANNLMSAGLKR 386


>gi|224077042|ref|XP_002305105.1| predicted protein [Populus trichocarpa]
 gi|222848069|gb|EEE85616.1| predicted protein [Populus trichocarpa]
          Length = 709

 Score =  340 bits (872), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 178/354 (50%), Positives = 236/354 (66%), Gaps = 31/354 (8%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYP----NLPPQ 62
           CL  ELWHACAGPL+SLP  G+ VVY PQGH EQ            +P+ P    +LPP 
Sbjct: 47  CL--ELWHACAGPLISLPKRGSIVVYVPQGHLEQ------------LPDLPLGIYDLPPH 92

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPE-EQK---------DTFVPIELGIPSKQPT 112
           + C++ +V +HA+  +D+VYAQ++L P S E EQK              +E  + +  P 
Sbjct: 93  VFCRVVDVKLHAEAASDDVYAQVSLVPESEEIEQKLREGVFEGDGEEEDVEATVKTTTP- 151

Query: 113 NYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFR 172
           + FCKTLTASDTSTHGGFSVPRRAAE  FP LD++ Q P+QEL+A+DLH  EWKFRHI+R
Sbjct: 152 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYTQQRPSQELVAKDLHGSEWKFRHIYR 211

Query: 173 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDS 232
           GQP+RHLLTTGWS FV+ K+LV+GD+VLF+  E  +L LG+RRA +         L +  
Sbjct: 212 GQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGELRLGVRRAAQVKCGPTFPALWNQQ 271

Query: 233 MHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFET 292
           ++   LA  A+A +  S F +++NPRAS SEF+IP  K++K++  +  S GMR +M FET
Sbjct: 272 LNQSSLADVANAISMRSAFRIYYNPRASSSEFIIPFNKFLKSLDQS-FSAGMRVKMRFET 330

Query: 293 EESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEP 346
           E+++ RRY G ITGIS+LDP RW  S W+ + V WD++ A  R  RVS WE+EP
Sbjct: 331 EDAAERRYTGLITGISELDPTRWPGSKWKCLLVRWDDTEAN-RHSRVSPWEVEP 383


>gi|297803732|ref|XP_002869750.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297315586|gb|EFH46009.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 637

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 189/386 (48%), Positives = 252/386 (65%), Gaps = 12/386 (3%)

Query: 2   IGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNK-EVDSHIPNYPNLP 60
           +G  + L  ELW  C+GPLV +P    RV YFPQGH EQ+ A+T + ++++  P +  LP
Sbjct: 1   MGGGEYLYDELWKLCSGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLFV-LP 59

Query: 61  PQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTF---VPIELGIPSKQPTNYFCK 117
           P+++C + NV++ A+ +TDEVYAQ+TL P+  E    T     P EL  P     + F K
Sbjct: 60  PKILCNVMNVSLQAEKDTDEVYAQITLIPVGTEVDGPTSPDPSPPELQRPK---VHSFSK 116

Query: 118 TLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKR 177
            LTASDTSTHGGFSV R+ A +  P LD + Q P QEL+A D+H  +WKF+HIFRGQP+R
Sbjct: 117 VLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRR 176

Query: 178 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGL 237
           HLLTTGWS FV++KRLVAGD+ +F+  EK +L +G+RRA R  + MPSSV+SS SMH+G+
Sbjct: 177 HLLTTGWSTFVTSKRLVAGDTFVFLRGEKGELRVGVRRANRQQSSMPSSVISSHSMHLGV 236

Query: 238 LAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSV 297
           LA A HA  T + F V++ PR   S+F+I L KY++A+   + SVGMRF+M FE E+S  
Sbjct: 237 LATARHATQTKTMFIVYYKPRT--SQFIISLNKYLEAM-SNKFSVGMRFKMRFEGEDSPE 293

Query: 298 RRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLF 357
           RRY GT+ G++D  P  W +S WR ++V WDE  +  R  +VS WEIEP  T    P   
Sbjct: 294 RRYSGTVIGVNDCSP-HWKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVTSENVPKSV 352

Query: 358 PLRLKRPWHPSTSSFNDNRDETASGL 383
            L+ KRP   S  S  D    TAS L
Sbjct: 353 MLKNKRPRQVSEVSALDVGGITASNL 378



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/98 (40%), Positives = 63/98 (64%), Gaps = 3/98 (3%)

Query: 671 QIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQL 729
           Q  Q + TR+  KV   G  VGR++D++    YNEL +++ ++F I+G+ +   R+ W++
Sbjct: 514 QSKQSSSTRSRTKVQMQGVPVGRAVDLTALKGYNELIDDIEKLFDIKGELQS--RNQWEI 571

Query: 730 VFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           VF D E D++L+GDDPW  F + V  I I S E+V+KM
Sbjct: 572 VFTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKM 609


>gi|291196867|emb|CAX63115.1| ARF4 protein [Cabomba aquatica]
          Length = 605

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 174/307 (56%), Positives = 219/307 (71%), Gaps = 6/307 (1%)

Query: 62  QLICQLHNVTMHADVETDEVYAQMTLQP-LSPEE--QKDTFVPIELG--IPSKQPTNYFC 116
           Q+ C++ +V +HAD E D+VYAQ+TL P L   E   K+     E G  I  K   + FC
Sbjct: 1   QIFCRVLDVKLHADQENDDVYAQVTLLPELESNEVCGKNLEEDEESGSEILCKTIPHMFC 60

Query: 117 KTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPK 176
           KTLTASDTSTHGGFSVPRRAAE  FP LD+S Q P+QEL+A+DLH  EWKFRHI+RGQP+
Sbjct: 61  KTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWKFRHIYRGQPR 120

Query: 177 RHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIG 236
           RHLLTTGWSVFV+ K LV+GD+VLF+  E  +L LGIRRA RPP+ +P SVLSS  +H+ 
Sbjct: 121 RHLLTTGWSVFVNQKGLVSGDAVLFLRGEDGELRLGIRRASRPPSSIPYSVLSSQGLHLS 180

Query: 237 LLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS 296
           +L+ AA+A +T S F VF++PRASPSEFVIP  KYVK++    +S+GMRF+M  E E+S+
Sbjct: 181 ILSPAANALSTKSMFHVFYSPRASPSEFVIPYWKYVKSLSRP-ISIGMRFKMRLEMEDSA 239

Query: 297 VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSL 356
            +R  G ITG  D+DP+RW NS WR + V WD+S+   RQ RVS WEIEP  + P     
Sbjct: 240 EKRCTGAITGACDVDPLRWPNSKWRCLMVRWDDSSLVGRQERVSPWEIEPSLSLPALSCP 299

Query: 357 FPLRLKR 363
              R+KR
Sbjct: 300 VAPRIKR 306


>gi|357446777|ref|XP_003593664.1| Auxin response factor [Medicago truncatula]
 gi|124360755|gb|ABN08732.1| Transcriptional factor B3; Auxin response factor [Medicago
           truncatula]
 gi|355482712|gb|AES63915.1| Auxin response factor [Medicago truncatula]
          Length = 682

 Score =  339 bits (869), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 179/375 (47%), Positives = 235/375 (62%), Gaps = 38/375 (10%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYP----NLPPQ 62
           CL  ELWHACAGPL+SLP  G+ VVY PQGH EQ              ++P    N+PP 
Sbjct: 51  CL--ELWHACAGPLISLPKKGSIVVYVPQGHFEQAH------------DFPVSACNIPPH 96

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPE--------------EQKDTFVPIELGIPS 108
           + C++ +V +HA+  +DEVY Q+ L P + +              E++DT   ++   P 
Sbjct: 97  VFCRVLDVKLHAEEGSDEVYCQVLLVPENQQLEQNVREGVIDADAEEEDTEAIVKSTTP- 155

Query: 109 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFR 168
               + FCKTLTASDTSTHGGFSVPRRAAE  FP LD+  Q P+QEL+A+DLH  EW+FR
Sbjct: 156 ----HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYGQQRPSQELVAKDLHGSEWRFR 211

Query: 169 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVL 228
           HI+RGQP+RHLLTTGWS FV+ K+LV+GD+VLF+  E  +L LGIRRA++  +      L
Sbjct: 212 HIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGELRLGIRRAVQLKSSGSFGGL 271

Query: 229 SSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM 288
           S   +  G L    +A +  S F+V +NPR S SEF+IP+ K++K++     S GMRFRM
Sbjct: 272 SGMQLDPGSLMDVVNALSKRSAFSVCYNPRVSSSEFIIPVNKFLKSL-DCSYSAGMRFRM 330

Query: 289 LFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 348
            FETE+++ RR+ G I GISD DPVRW  S W+ + V WD+  A     RVS WEIEP  
Sbjct: 331 RFETEDAAERRFTGLIAGISDADPVRWPGSKWKCLLVRWDDIEASRHNNRVSPWEIEPSG 390

Query: 349 TFPMYPSLFPLRLKR 363
           +     +L    LKR
Sbjct: 391 SASNSSNLMAASLKR 405


>gi|2245390|gb|AAB62404.1| auxin response transcription factor 3 [Arabidopsis thaliana]
          Length = 608

 Score =  338 bits (868), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 174/353 (49%), Positives = 233/353 (66%), Gaps = 20/353 (5%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G   CL  ELWHACAGPL+SLP  G+ V+YFPQGH EQ         D     Y  LPP 
Sbjct: 48  GGGVCL--ELWHACAGPLISLPKRGSLVLYFPQGHLEQAP-------DFSAAIY-GLPPH 97

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPE---EQKDTFVPIELG------IPSKQPTN 113
           + C++ +V +HA+  TDEVYAQ++L P S +   + ++  + ++ G      +      +
Sbjct: 98  VFCRILDVKLHAETTTDEVYAQVSLLPESEDIERKVREGIIDVDGGEEDYEVLKRSNTPH 157

Query: 114 YFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRG 173
            FCKTLTASDTSTHGGFSVPRRAAE  FP LD+S   P+QEL+ARDLH +EW+FRHI+RG
Sbjct: 158 MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRHIYRG 217

Query: 174 QPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSM 233
           QP+RHLLTTGWS FV+ K+LV+GD+VLF+  +  +L LG+RRA +       S   + +M
Sbjct: 218 QPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGTAALSAQYNQNM 277

Query: 234 HIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETE 293
           +    +  AHA +T+S F++ +NP+AS S F+IP  K++K V +    +GMRF+   E+E
Sbjct: 278 NHNNFSEVAHAISTHSVFSISYNPKASWSNFIIPAPKFLKVVDYP-FCIGMRFKARVESE 336

Query: 294 ESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEP 346
           ++S RR  G I+GISDLDP+RW  S WR + V WD+  A   Q RVS WEIEP
Sbjct: 337 DASERRSPGIISGISDLDPIRWPGSKWRCLLVRWDDIVANGHQQRVSPWEIEP 389


>gi|350539809|ref|NP_001234534.1| auxin response factor 9 [Solanum lycopersicum]
 gi|296245060|gb|ADH03013.1| auxin response factor 9 [Solanum lycopersicum]
          Length = 644

 Score =  338 bits (867), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 178/348 (51%), Positives = 238/348 (68%), Gaps = 13/348 (3%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G    L  ELW  CAGP+V +P  G RV YFPQGH EQ+ A+ N+E+D  +P++ NL  +
Sbjct: 5   GKKDALYHELWQLCAGPVVDVPREGERVYYFPQGHMEQLVASINQEMDQRVPSF-NLKSK 63

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPE----EQKDTFVPIELGIPSKQPTNYFCKT 118
           ++C++ N    A+ + DEVY Q+TL P +P        D  +P ++    K   + FCK 
Sbjct: 64  VLCRVINSHFLAEEDNDEVYVQITLMPEAPHVPEPTTPDPLIPQDV----KPRFHSFCKV 119

Query: 119 LTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRH 178
           LTASDTSTHGGFSV R+ A +  P LD + Q P QELIA+DLHDVEW+F+HIFRGQP+RH
Sbjct: 120 LTASDTSTHGGFSVLRKHANECLPPLDLNQQTPTQELIAKDLHDVEWRFKHIFRGQPRRH 179

Query: 179 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLL 238
           LLTTGWS FVS+K+LVAGDS +F+     QL +G++R +R  + MPSSV+SS SMH+G+L
Sbjct: 180 LLTTGWSTFVSSKKLVAGDSFVFLRGNNGQLRVGVKRLVRQQSSMPSSVMSSQSMHLGVL 239

Query: 239 AAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVR 298
           A A+HA  T + F V++ PR   ++F++ + KY++A+ H   +VGMRF+M FE E +  R
Sbjct: 240 ATASHAVTTQTMFVVYYKPRT--TQFIVGVNKYLEALKH-EYAVGMRFKMQFEAEGNPDR 296

Query: 299 RYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEP 346
           R+MGTI GI DL   +W NS WRS+KV WDE  A  R  RVS WEI+P
Sbjct: 297 RFMGTIVGIDDLSS-QWKNSAWRSLKVRWDEPAAIARPDRVSPWEIKP 343



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/181 (30%), Positives = 91/181 (50%), Gaps = 25/181 (13%)

Query: 604 NCNTDSQNSVVFGVHIDSSGL--------LLPTTVSSFTTSVDPGVSSMPLGDSG----- 650
            C+T  +   +FG+ + SS +        L P  +S       P  +++P GDS      
Sbjct: 465 KCDT-KKTCRLFGIDLKSSSISTTEARLQLQPAGISCVFAERAPP-NTVPAGDSDQKSEL 522

Query: 651 ---FHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELR 706
              F + M G ++    L     Q  Q   TR+  KV   G +VGR++D++    Y+EL 
Sbjct: 523 SVDFKDQMQGHLR----LPLKEVQSKQSCSTRSRTKVQMQGVAVGRAVDLTILKGYDELT 578

Query: 707 EELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQK 766
           +EL +MF I+G+ +   R  W ++F D E D +L+GD PW+ F + V  I I S +D++K
Sbjct: 579 KELEEMFEIQGELQS--RQKWGILFTDDEGDTMLMGDYPWQDFCNVVRKIFICSSQDMKK 636

Query: 767 M 767
           +
Sbjct: 637 L 637


>gi|15226178|ref|NP_180942.1| auxin response factor 3 [Arabidopsis thaliana]
 gi|46395605|sp|O23661.2|ARFC_ARATH RecName: Full=Auxin response factor 3; AltName: Full=Protein ETTIN
 gi|12484199|gb|AAG53998.1|AF336917_1 auxin response transcription factor 3 [Arabidopsis thaliana]
 gi|13430802|gb|AAK26023.1|AF360313_1 auxin response transcription factor 3 (ETTIN/ARF3) [Arabidopsis
           thaliana]
 gi|3805770|gb|AAC69148.1| auxin response transcription factor 3 (ETTIN/ARF3) [Arabidopsis
           thaliana]
 gi|15810653|gb|AAL07251.1| auxin response transcription factor 3 [Arabidopsis thaliana]
 gi|330253806|gb|AEC08900.1| auxin response factor 3 [Arabidopsis thaliana]
          Length = 608

 Score =  338 bits (867), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 174/353 (49%), Positives = 233/353 (66%), Gaps = 20/353 (5%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G   CL  ELWHACAGPL+SLP  G+ V+YFPQGH EQ         D     Y  LPP 
Sbjct: 48  GGGVCL--ELWHACAGPLISLPKRGSLVLYFPQGHLEQAP-------DFSAAIY-GLPPH 97

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPE---EQKDTFVPIELG------IPSKQPTN 113
           + C++ +V +HA+  TDEVYAQ++L P S +   + ++  + ++ G      +      +
Sbjct: 98  VFCRILDVKLHAETTTDEVYAQVSLLPESEDIERKVREGIIDVDGGEEDYEVLKRSNTPH 157

Query: 114 YFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRG 173
            FCKTLTASDTSTHGGFSVPRRAAE  FP LD+S   P+QEL+ARDLH +EW+FRHI+RG
Sbjct: 158 MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRHIYRG 217

Query: 174 QPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSM 233
           QP+RHLLTTGWS FV+ K+LV+GD+VLF+  +  +L LG+RRA +       S   + +M
Sbjct: 218 QPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGTAALSAQYNQNM 277

Query: 234 HIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETE 293
           +    +  AHA +T+S F++ +NP+AS S F+IP  K++K V +    +GMRF+   E+E
Sbjct: 278 NHNNFSEVAHAISTHSVFSISYNPKASWSNFIIPAPKFLKVVDYP-FCIGMRFKARVESE 336

Query: 294 ESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEP 346
           ++S RR  G I+GISDLDP+RW  S WR + V WD+  A   Q RVS WEIEP
Sbjct: 337 DASERRSPGIISGISDLDPIRWPGSKWRCLLVRWDDIVANGHQQRVSPWEIEP 389


>gi|3228517|gb|AAC23589.1| ETTIN [Arabidopsis thaliana]
          Length = 608

 Score =  338 bits (867), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 174/353 (49%), Positives = 233/353 (66%), Gaps = 20/353 (5%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G   CL  ELWHACAGPL+SLP  G+ V+YFPQGH EQ         D     Y  LPP 
Sbjct: 48  GGGVCL--ELWHACAGPLISLPKRGSLVLYFPQGHLEQAP-------DFSAAIY-GLPPH 97

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPE---EQKDTFVPIELG------IPSKQPTN 113
           + C++ +V +HA+  TDEVYAQ++L P S +   + ++  + ++ G      +      +
Sbjct: 98  VFCRILDVKLHAETTTDEVYAQVSLLPESEDIERKVREGIIDVDGGEEDYEVLKRSNTPH 157

Query: 114 YFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRG 173
            FCKTLTASDTSTHGGFSVPRRAAE  FP LD+S   P+QEL+ARDLH +EW+FRHI+RG
Sbjct: 158 MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRHIYRG 217

Query: 174 QPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSM 233
           QP+RHLLTTGWS FV+ K+LV+GD+VLF+  +  +L LG+RRA +       S   + +M
Sbjct: 218 QPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGTAALSAQYNQNM 277

Query: 234 HIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETE 293
           +    +  AHA +T+S F++ +NP+AS S F+IP  K++K V +    +GMRF+   E+E
Sbjct: 278 NHNNFSEVAHAISTHSVFSISYNPKASWSNFIIPAPKFLKVVDYP-FCIGMRFKARVESE 336

Query: 294 ESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEP 346
           ++S RR  G I+GISDLDP+RW  S WR + V WD+  A   Q RVS WEIEP
Sbjct: 337 DASERRSPGIISGISDLDPIRWPGSKWRCLLVRWDDIVANGHQQRVSPWEIEP 389


>gi|356521420|ref|XP_003529354.1| PREDICTED: auxin response factor 3-like [Glycine max]
          Length = 709

 Score =  338 bits (866), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 176/371 (47%), Positives = 236/371 (63%), Gaps = 29/371 (7%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
           CL  ELWHACAGPL+SLP  G+ VVYFPQGH EQ         D  +P   N+P  + C+
Sbjct: 26  CL--ELWHACAGPLISLPKKGSVVVYFPQGHLEQHLH------DFPLPASANIPSHVFCR 77

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPE--------------EQKDTFVPIELGIPSKQPT 112
           + +V +HA+  +DEV+ Q+ L P + +              E++D    ++   P     
Sbjct: 78  VLDVKLHAEEGSDEVHCQVVLVPETEQVHQKLREGEFDADGEEEDAEAVMKSTTP----- 132

Query: 113 NYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFR 172
           + FCKTLTASDTSTHGGFSVPRRAAE  FP LD+S Q P+QEL+A+DLH  EW+FRHI+R
Sbjct: 133 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGQEWRFRHIYR 192

Query: 173 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDS 232
           GQP+RHLLTTGWS FV+ K+LV+GD+VLF+  E  +L LGIRRA +  +    S LS   
Sbjct: 193 GQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGELRLGIRRAAQLKSGSTFSALSGQQ 252

Query: 233 MHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFET 292
           +    L    +A +    F++ +NPR S SEF+IP+ +++K++ ++  S GMRFRM FET
Sbjct: 253 LSPTSLMDVVNALSARCAFSIHYNPRVSTSEFIIPIHRFLKSLDYS-YSAGMRFRMRFET 311

Query: 293 EESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPM 352
           E+++ RR+ G I GI+D+DPVRW  S WR + V WD+     R  RVS WEIEP  +   
Sbjct: 312 EDAAERRFTGLIVGIADVDPVRWPGSKWRCLMVRWDDLEV-TRHNRVSPWEIEPSGSAST 370

Query: 353 YPSLFPLRLKR 363
             +L    LKR
Sbjct: 371 ANNLMSAGLKR 381


>gi|379323194|gb|AFD01296.1| auxin response factor 3-1 [Brassica rapa subsp. pekinensis]
          Length = 605

 Score =  337 bits (865), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 173/350 (49%), Positives = 233/350 (66%), Gaps = 21/350 (6%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
           CL  ELWHACAGPL+SLP  G+ V+YFPQGH EQ         D     Y  LPP + C+
Sbjct: 50  CL--ELWHACAGPLISLPKRGSLVLYFPQGHLEQAP-------DFSAAIY-GLPPHVFCR 99

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQK---DTFVPIELG------IPSKQPTNYFCK 117
           + +V +HA+  TDEVYAQ++L P S + ++   +  + ++ G      +      + FCK
Sbjct: 100 ILDVKLHAETATDEVYAQVSLLPESEDVERKVREGVIDVDGGEEDYEVVKRTNTPHMFCK 159

Query: 118 TLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKR 177
           TLTASDTSTHGGFSVPRRAAE  FP LD++   P+QEL+ARDLH +EW+FRHI+RGQP+R
Sbjct: 160 TLTASDTSTHGGFSVPRRAAEDCFPPLDYTQPRPSQELLARDLHGLEWRFRHIYRGQPRR 219

Query: 178 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGL 237
           HLLTTGWS FV+ K+LV+GD+VLF+  +  +L LG+RRA +       S   + +M+   
Sbjct: 220 HLLTTGWSAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGASAFSSQYNQNMNHNN 279

Query: 238 LAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSV 297
            A   HA +TNS F +++NP+AS S F+IP  K++K V +    +GMRF+   E+E++S 
Sbjct: 280 FAEVVHAISTNSAFNIYYNPKASWSNFIIPAPKFLKTVDYP-FCIGMRFKARVESEDASE 338

Query: 298 RRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTA-GERQPRVSLWEIEP 346
           RR  G ITGI+DLDP+RW  S WR + V WD++ A G  Q R+S WEIEP
Sbjct: 339 RRSPGIITGINDLDPIRWPGSKWRCLLVRWDDTDANGHHQQRISPWEIEP 388


>gi|449452410|ref|XP_004143952.1| PREDICTED: auxin response factor 9-like [Cucumis sativus]
          Length = 688

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 178/362 (49%), Positives = 241/362 (66%), Gaps = 13/362 (3%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           L  ELW ACAGPLV +P V  RV YFPQ       A+TN E++  IP + NL  +++C++
Sbjct: 27  LYMELWRACAGPLVDIPRVDERVFYFPQ------QASTNLELNKRIPLF-NLDSKILCRV 79

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTH 127
            ++   AD E+DEVYAQ+TL P S + +  + +      P +   + FCK LTASDTSTH
Sbjct: 80  IHIEPLADHESDEVYAQITLMPESNQNEPKS-MDPCPPEPPRPVVHSFCKVLTASDTSTH 138

Query: 128 GGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 187
           GGFSV R+ A +  P LD +L  P Q+L+A+DLH  EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 139 GGFSVLRKHATECLPPLDMTLATPTQDLVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 198

Query: 188 VSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAAT 247
           V++KRL AGDS +F+  +  +L +G+RR  R  + MP SV+SS SMH+G+LA A+HA  T
Sbjct: 199 VTSKRLSAGDSFVFLRGDNGELRVGVRRRARQQSSMPPSVISSQSMHLGVLATASHAVTT 258

Query: 248 NSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGI 307
            + F V++ PR    +F+I L KY++AV + + SVGMRF M FE E+S  RR+ GTI G 
Sbjct: 259 QTRFVVYYKPRT--CQFIISLNKYLEAV-NNKFSVGMRFNMSFEGEDSPERRFSGTIIGA 315

Query: 308 SDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL-RLKRPWH 366
            D+ P  W NS WRS++V WDE T+  R  RVS W+IEPLT+  +     P+ + KRP  
Sbjct: 316 VDISP-HWPNSSWRSLRVQWDEQTSILRPDRVSPWDIEPLTSSAVTGLSQPISKNKRPRQ 374

Query: 367 PS 368
           P+
Sbjct: 375 PT 376



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 57/91 (62%), Gaps = 3/91 (3%)

Query: 678 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           TR+  KV   G +VGR++D++    Y++L +EL +MF + G+     R  W++V+ D E 
Sbjct: 576 TRSRTKVLMHGMAVGRAVDLTILEGYDQLIDELEKMFDVRGQL--CARDKWEIVYTDDEG 633

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           D++L+GDDPWE F + V  I I S E V+ M
Sbjct: 634 DMMLVGDDPWEEFRNMVRRIFICSKEQVKNM 664


>gi|356567961|ref|XP_003552183.1| PREDICTED: auxin response factor 9-like [Glycine max]
          Length = 664

 Score =  334 bits (857), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 180/366 (49%), Positives = 250/366 (68%), Gaps = 10/366 (2%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+   L  +LW ACAGP V +P  G RV YFPQGH EQ+  +TN+E++  IP +  LP +
Sbjct: 9   GEEDELYEQLWKACAGPHVEVPRTGQRVFYFPQGHMEQLEVSTNQELNQRIPLF-KLPSK 67

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           ++C++ NV + A+ ETDEVYAQ+TL P S + +  +  P    +PS +  + FCK LTAS
Sbjct: 68  ILCRVVNVHLLAEQETDEVYAQITLVPESNQAEPMSPDPCPAELPSPR-VHSFCKVLTAS 126

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSV R+ A +  P+LD S   P QEL+A+DL   EW+F+HIFRGQP+RHLLTT
Sbjct: 127 DTSTHGGFSVLRKHATECLPALDMSKSTPTQELVAKDLQGYEWRFKHIFRGQPRRHLLTT 186

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWS FV++KRLVAGD+ +F+     +L +G+RR     + MPSSV+SS SMH+G+LA A+
Sbjct: 187 GWSNFVTSKRLVAGDTFVFLRGNNGELRVGVRRIAPVQSSMPSSVISSQSMHLGVLATAS 246

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEES--SVRRY 300
           HA AT + F V++ PRA  S+F++ + KY++A+ + + +VGMRF+  FE +ES  + +R+
Sbjct: 247 HAVATQTLFVVYYKPRA--SQFIVSVNKYLEAI-NQKCNVGMRFKTRFEGDESPENYKRF 303

Query: 301 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPMYPS-LFP 358
            GTI G+ D+ P  W NS+WRS+KV WDE  +  R  RV  WEIEP L + P   S    
Sbjct: 304 SGTIVGVEDISP-HWVNSNWRSLKVQWDEPASFPRPDRVLPWEIEPILASVPTTSSQTAA 362

Query: 359 LRLKRP 364
           ++ KRP
Sbjct: 363 IKNKRP 368



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 60/91 (65%), Gaps = 3/91 (3%)

Query: 678 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           +R+  KV   G +VGR++D++    Y++L +EL +MF I+G+ +  LR+ W++VF D E 
Sbjct: 553 SRSCTKVQMQGVAVGRAVDLTTLDGYDQLVDELEKMFDIKGQLQ--LRNKWEIVFTDDEG 610

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           D++L+GDDPW  F   V  I I S +DV K+
Sbjct: 611 DMMLVGDDPWLEFCKMVRRIFIYSSQDVHKL 641


>gi|356555380|ref|XP_003546010.1| PREDICTED: auxin response factor 3-like [Glycine max]
          Length = 728

 Score =  334 bits (856), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 177/375 (47%), Positives = 236/375 (62%), Gaps = 39/375 (10%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYP----NLPPQ 62
           CL  ELWHACAGPL+SLP  G+ VVY PQGH E            H+ ++P    ++PP 
Sbjct: 42  CL--ELWHACAGPLISLPKRGSVVVYLPQGHFE------------HVQDFPVNAFDIPPH 87

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPE--------------EQKDTFVPIELGIPS 108
           + C++ +V +HA+  +DEVY Q+ L P S +              E++DT   ++   P 
Sbjct: 88  VFCRVLDVKLHAEEGSDEVYCQVLLVPESEQVEHSLREGEIVADGEEEDTGATVKSTTP- 146

Query: 109 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFR 168
               + FCKTLTASDTSTHGGFSVPRRAAE  FP LD+S Q P+QEL+A+DLH +EW+FR
Sbjct: 147 ----HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGLEWRFR 202

Query: 169 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVL 228
           HI+RGQP+RHLLTTGWS FV+ K+LV+GD+VLF+     +L LGIRRA +       +V 
Sbjct: 203 HIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGNDGELRLGIRRAAQLKWAGSFAVP 262

Query: 229 SSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM 288
           S   ++   L    +A +T   F+V +NPR     F+IP+ K+++++     SVGMRFRM
Sbjct: 263 SGQQLNPATLMDVVNALSTRCAFSVCYNPRYFSXXFIIPVHKFLESL-DCSYSVGMRFRM 321

Query: 289 LFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 348
            FETE+++ RR+ G I GISD+DPVRW  S WR + V WD+  A  R  RVS WEIEP  
Sbjct: 322 RFETEDAADRRFTGLIAGISDVDPVRWPGSKWRCLLVRWDDIEAA-RHNRVSPWEIEPSG 380

Query: 349 TFPMYPSLFPLRLKR 363
           +     +L    LKR
Sbjct: 381 SASNSSNLMAAGLKR 395


>gi|224058145|ref|XP_002299455.1| predicted protein [Populus trichocarpa]
 gi|222846713|gb|EEE84260.1| predicted protein [Populus trichocarpa]
          Length = 537

 Score =  334 bits (856), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 178/339 (52%), Positives = 238/339 (70%), Gaps = 6/339 (1%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           L +ELW ACAGPLV +P  G RV YFPQGH EQ+ A+TN+E++  +P + NLP +++C++
Sbjct: 3   LYTELWKACAGPLVDVPKRGERVFYFPQGHMEQLEASTNQELNQRVPLF-NLPSKILCRV 61

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTH 127
            +  + A+ +TDEVYAQ+TL P S ++ + T        P +   + FCK LTASDTSTH
Sbjct: 62  IHTQLLAEQDTDEVYAQITLIPES-DQIEPTSPDSSSSEPPRPTVHSFCKVLTASDTSTH 120

Query: 128 GGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 187
           GGFSV R+ A +  P LD +   P QEL+A+DLH  EW+F+HIFRGQP+RHLLTTGWS F
Sbjct: 121 GGFSVLRKHATECLPPLDMTQPTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 180

Query: 188 VSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAAT 247
           V++KRLVAGDS +F+  E  +L +G+RR     + MPSSV+SS SMH+G+LA A+HA +T
Sbjct: 181 VTSKRLVAGDSFVFLRGENGELRVGVRRVACQQSSMPSSVISSQSMHLGVLATASHAVST 240

Query: 248 NSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGI 307
            + F V++ PR   S+F+I L KY++AV +  V VGMRF+M FE E+S  RR+ GTI G+
Sbjct: 241 LTLFVVYYKPRT--SQFIISLNKYLEAVSNKFV-VGMRFKMRFEGEDSPDRRFSGTIVGV 297

Query: 308 SDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEP 346
            D  P  W++S WRS+KV WDE     R  RVS WEIEP
Sbjct: 298 EDFSP-HWNDSKWRSLKVQWDEPAPIPRPDRVSPWEIEP 335



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 38/93 (40%), Positives = 60/93 (64%), Gaps = 3/93 (3%)

Query: 676 TPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDR 734
           T TR+  KV   G +VGR++D++    Y++L +EL Q+F I+G+     R  W++V+ D 
Sbjct: 447 TSTRSRTKVQMQGIAVGRAVDLTMLKGYSQLIDELEQLFDIKGQLHP--RDKWEIVYTDD 504

Query: 735 ENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           E D++L+GDDPW  F + V  I I S +DV++M
Sbjct: 505 EGDMMLVGDDPWPEFCNMVRRIYICSSQDVKRM 537


>gi|224116336|ref|XP_002331957.1| predicted protein [Populus trichocarpa]
 gi|222874734|gb|EEF11865.1| predicted protein [Populus trichocarpa]
          Length = 714

 Score =  333 bits (855), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 177/358 (49%), Positives = 234/358 (65%), Gaps = 39/358 (10%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYP----NLPPQ 62
           CL  ELWHACAGPL+SLP  G+ VVYFPQGH EQ            +P+ P    +LP  
Sbjct: 47  CL--ELWHACAGPLISLPKRGSVVVYFPQGHLEQ------------LPDLPLAVYDLPSH 92

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPE-EQK-------------DTFVPIELGIPS 108
           + C++ +V +HA+  +DEVYAQ++L P S E EQK             D    +++  P 
Sbjct: 93  VFCRVVDVKLHAEAASDEVYAQVSLVPESEEIEQKLREGIFEGDGEEEDGEATVKMTTP- 151

Query: 109 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFR 168
               + FCKTLTASDTSTHGGFSVPRRAAE  FP LD++ Q P+QEL+A+DLH  EWKFR
Sbjct: 152 ----HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYTQQRPSQELVAKDLHGSEWKFR 207

Query: 169 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVL 228
           HI+RGQP+RHLLTTGWS FV+ K+LV+GD+VLF+  E  +L LG+RRA +          
Sbjct: 208 HIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGELRLGVRRAAQVKCGPTFPAQ 267

Query: 229 SSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM 288
            +  ++       A+A +T S F +++NPRAS SEF+IP  K++K++  +  S GMRF+M
Sbjct: 268 WNHQLNQISPGDVANAISTRSFFHIYYNPRASSSEFIIPFNKFLKSLDQS-FSSGMRFKM 326

Query: 289 LFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEP 346
            FETE+++ RRY G ITG+S+LDP RW  S W+ + V WD+  A  R  RVS WE+EP
Sbjct: 327 RFETEDAAERRYTGIITGVSELDPARWPGSKWKCLLVRWDDREA-NRLSRVSPWEVEP 383


>gi|413943363|gb|AFW76012.1| hypothetical protein ZEAMMB73_306865 [Zea mays]
          Length = 631

 Score =  332 bits (851), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 179/254 (70%), Positives = 197/254 (77%), Gaps = 8/254 (3%)

Query: 201 FIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRAS 260
            + N+ NQLLLGIRRA RP TVMPSSVLSSDSMHIGLLAAAAHAA+TNS FT+F+NPRAS
Sbjct: 5   LVRNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFTIFYNPRAS 64

Query: 261 PSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHW 320
           PSEFVIPL KYVKAV+HTR+SVGMRFRMLFETEESSVRRYMGTITGISDLD VRW NSHW
Sbjct: 65  PSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTITGISDLDSVRWPNSHW 124

Query: 321 RSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWHPSTSSFNDNRDET- 379
           RSVKVGWDESTAG+RQPRVSLWEIEPLTTFP Y S FPLRLKRPW     S +  +D+  
Sbjct: 125 RSVKVGWDESTAGDRQPRVSLWEIEPLTTFPTYTSPFPLRLKRPWPTGLPSLHGGKDDDL 184

Query: 380 ASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGNDHNQQYQAMLAAGMQSGDP 439
           A+ L WLR  T   G  +LNF  LGM  WMQ R++ S LG   +  YQAM     Q  DP
Sbjct: 185 ANSLMWLRDTTNP-GFQSLNFGGLGMNSWMQPRLDTSLLGLQPD-MYQAMATGAFQ--DP 240

Query: 440 VRQQ---FMQLQQP 450
            +Q     +Q QQP
Sbjct: 241 TKQASPTMLQFQQP 254



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 82/159 (51%), Positives = 106/159 (66%), Gaps = 17/159 (10%)

Query: 603 ENCNTDSQNSVVFGVHIDSSGLLLP-----------TTVSSFTTS--VDPGVSSMPLGDS 649
           ++ N D QN ++FGV IDS  LL+            +T   ++TS  + P  +  PL D 
Sbjct: 476 QDANPDPQNHLLFGVSIDSQSLLMEGGIHGLQNGNDSTAIPYSTSNFLSPSQNDFPL-DH 534

Query: 650 GFHNSMYGCMQDSSELLHNVGQIDQLT-PTRTFVKVYKSGSVGRSLDISRFSSYNELREE 708
             ++S  GC+ DS  +       DQ+  P  TFVKVYKSG+ GRSLDI+RFSSY+ELR E
Sbjct: 535 TLNSS--GCLDDSGYVPPCSDNSDQVNRPPATFVKVYKSGTYGRSLDITRFSSYHELRRE 592

Query: 709 LGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWE 747
           LG++FG+EG+ EDPLRSGWQLVFVDRE DVLL+GDDPW+
Sbjct: 593 LGRLFGLEGQLEDPLRSGWQLVFVDREEDVLLVGDDPWQ 631


>gi|242055813|ref|XP_002457052.1| hypothetical protein SORBIDRAFT_03g000530 [Sorghum bicolor]
 gi|241929027|gb|EES02172.1| hypothetical protein SORBIDRAFT_03g000530 [Sorghum bicolor]
          Length = 688

 Score =  331 bits (849), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 181/422 (42%), Positives = 261/422 (61%), Gaps = 21/422 (4%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G +  L +ELW ACAGPLV LP    RV YF QGH EQ+   T+  + +       +P +
Sbjct: 4   GRDPELFAELWRACAGPLVELPQTDERVFYFLQGHLEQLQEPTDPALLADQIKMFQVPNK 63

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNY-FCKTLTA 121
           ++C++ NV + A+ ETDE+YAQ+TLQP  P++     +P      + +P  + FCK LT 
Sbjct: 64  ILCKVVNVELKAETETDEMYAQITLQP-EPDQMDLPTLPDPPLPETSRPVVHSFCKILTP 122

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSV RR A +  P LD S+  P QELI +DLH  EW+F+HI+RGQP+RHLLT
Sbjct: 123 SDTSTHGGFSVLRRHANECLPPLDMSMPTPTQELITKDLHGSEWRFKHIYRGQPRRHLLT 182

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWS FV++K+L+AGD+ +++ +E  +  +G+RR ++  + MP+SV+SS SMH+G+LA+A
Sbjct: 183 TGWSTFVTSKKLIAGDAFVYLRSETGEQRVGVRRLVQKQSTMPASVISSQSMHLGVLASA 242

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           +HA  TNS F V++ PR S S++++ L KY+++      +VGMRF+M FE E+  V+++ 
Sbjct: 243 SHAIKTNSIFLVYYRPRLSQSQYIVSLNKYLESS-KIGFNVGMRFKMSFEGEDVPVKKFS 301

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL------TTFPMYPS 355
           GT+    DL P  W  S W+++KV WDE+T      RVS WEIEP          P+ PS
Sbjct: 302 GTVVDKGDLSP-HWQGSDWKTLKVKWDEATNFNGPERVSSWEIEPFDASAPAINIPVQPS 360

Query: 356 LFPLRLKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTL-----NFQSLGMFPWMQ 410
              ++ KRP   +  S + +  E A    WL  G  EQ  T++     N  S+    W  
Sbjct: 361 ---MKNKRP-RETAESLDIHALEPAQEF-WL-SGRPEQHKTSISSNEPNCISVHQVAWTS 414

Query: 411 QR 412
           +R
Sbjct: 415 ER 416



 Score = 48.5 bits (114), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 72/155 (46%), Gaps = 18/155 (11%)

Query: 614 VFGV----HIDSSGLLLPTTVSSFTTSVDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNV 669
           +FGV    H  SSG+    TV    TS+    S     DSG  +++    +D + L++  
Sbjct: 519 LFGVNLVNHTRSSGIADKMTVGVGETSMRGAGS---FEDSGQLSALSRVTKDHTHLVNES 575

Query: 670 G---QIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIE--GKFEDPL 723
               Q  Q    R  +KV   G +VG+++D+     Y +L  EL +MF I+  G  E+  
Sbjct: 576 PREIQSHQSCSGRNRIKVQMHGHAVGKAVDLGNLDGYVQLMGELEEMFEIKDLGSKEE-- 633

Query: 724 RSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKI 758
              W++ F + END + +G   W+ F   V  I I
Sbjct: 634 ---WKVTFTNDENDTMEVGAVLWQEFCQMVRKIVI 665


>gi|108864433|gb|ABG22497.1| Auxin response factor 2, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 771

 Score =  331 bits (849), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 165/313 (52%), Positives = 220/313 (70%), Gaps = 10/313 (3%)

Query: 58  NLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNY--- 114
           NLP +++C++ NV + A+ +TDEVYAQ+TL P S +++ +     E  +PS     +   
Sbjct: 5   NLPWKILCEVMNVELKAEPDTDEVYAQLTLLPESKQQEDNGST--EEEVPSAPAAGHVRP 62

Query: 115 ----FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHI 170
               FCKTLTASDTSTHGGFSV RR A++  P LD S QPP QEL+A+DLH VEW+FRHI
Sbjct: 63  RVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHI 122

Query: 171 FRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSS 230
           FRGQP+RHLL +GWSVFVSAKRLVAGD+ +F+  E  +L +G+RRA+R  T +PSSV+SS
Sbjct: 123 FRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISS 182

Query: 231 DSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLF 290
            SMH+G+LA A HA  T + FTV++ PR SP+EFV+P  +Y++++     S+GMRF+M F
Sbjct: 183 HSMHLGVLATAWHAVNTGTMFTVYYKPRTSPAEFVVPYDRYMESL-KQNYSIGMRFKMRF 241

Query: 291 ETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTF 350
           E EE+  +R+ GTI G+ D DP  W  S WRS+KV WDE+++  R  RVS W+IEP  + 
Sbjct: 242 EGEEAPEQRFTGTIVGMGDSDPAGWPESKWRSLKVRWDEASSIPRPERVSPWQIEPAVSP 301

Query: 351 PMYPSLFPLRLKR 363
           P    L   R KR
Sbjct: 302 PPVNPLPVPRTKR 314



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 51/137 (37%), Positives = 77/137 (56%), Gaps = 2/137 (1%)

Query: 662 SSELLHNVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFE 720
           S +   N+    Q   TR+  KV+K G ++GRS+D+++F+ Y EL  EL  MF   G+ +
Sbjct: 626 SQQASRNMSCKSQGVSTRSCKKVHKQGIALGRSVDLTKFNGYEELIAELDDMFDFNGELK 685

Query: 721 DPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSG 780
            P +  W +V+ D E D++L+GDDPW  F   V  I I + E+VQ+M    + S S  S 
Sbjct: 686 GPKKE-WMVVYTDNEGDMMLVGDDPWIEFCDMVHKIFIYTREEVQRMNPGTLNSRSEDSH 744

Query: 781 QRANSRGNCGRDPVGSL 797
             +  RG+ GR+  G L
Sbjct: 745 ANSMERGSVGREMRGCL 761


>gi|326501930|dbj|BAK06457.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 763

 Score =  331 bits (848), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 165/346 (47%), Positives = 237/346 (68%), Gaps = 7/346 (2%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G +  L +ELW ACAGPLV +P  G RV YF QGH EQ+   T+  + +       +P +
Sbjct: 65  GRDPELFAELWRACAGPLVEVPQRGERVFYFLQGHLEQLQEPTDSALLAEQIKMFQVPYK 124

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPS--KQPTNYFCKTLT 120
           ++C++ NV + A+ ETDEVYAQ+TLQP +  +Q D  + ++  +P   +   + FCK LT
Sbjct: 125 ILCKVVNVELKAETETDEVYAQITLQPDA--DQSDLPLILDPTLPETPRPVVHTFCKILT 182

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
            SDTSTHGGFSV RR A +  P LD ++  P QE+I++DLH  EW+F+HI+RGQP+RHLL
Sbjct: 183 PSDTSTHGGFSVLRRHANECLPPLDMTMPTPTQEIISKDLHGSEWRFKHIYRGQPRRHLL 242

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 240
           TTGWS FV++K+L+AGD+ +++ +E  +  +G+RR ++  + MP+SV+SS SMH+G+LA+
Sbjct: 243 TTGWSTFVTSKKLMAGDAFVYLRSETGEQRVGVRRLVQKQSTMPASVISSQSMHLGVLAS 302

Query: 241 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 300
           A+HA  TNS F V++ PR S S++++ + KY  A   T  +VGMRFRM FE E+  V+++
Sbjct: 303 ASHAIKTNSIFVVYYRPRLSQSQYIVSVNKYHLAS-KTGFTVGMRFRMNFEAEDVPVKKF 361

Query: 301 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQP-RVSLWEIE 345
            GTI G  D  P +WS S W+S+KV WD+S A    P RVS WEI+
Sbjct: 362 FGTIVGDGDFSP-QWSGSEWKSLKVQWDDSVAICNGPERVSPWEID 406



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 53/109 (48%), Gaps = 8/109 (7%)

Query: 679 RTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 737
           R  VKV   G +VGR++D++    Y  L  EL QMF I+      ++  +++ F D E D
Sbjct: 659 RNRVKVQMHGNAVGRAVDLASLDGYERLTNELEQMFEIKD-----IKQNFKVAFNDNEGD 713

Query: 738 VLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESF--SPSSGQRAN 784
            + +GDDPW  F   V  I I   ED + M       F  +P    +AN
Sbjct: 714 TMKVGDDPWMEFCRMVRKIVIYPIEDDKNMDPHQTSVFAAAPDEDLKAN 762


>gi|323388733|gb|ADX60171.1| ARF transcription factor [Zea mays]
          Length = 686

 Score =  330 bits (845), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 171/387 (44%), Positives = 244/387 (63%), Gaps = 23/387 (5%)

Query: 4   DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQL 63
           D + L  ELW ACAGPLV LP    RV YF QGH EQ+   T+  + +       +P ++
Sbjct: 8   DPEELFEELWRACAGPLVELPQTNERVFYFLQGHLEQLQEPTDPALLAEQIKMFQVPNKI 67

Query: 64  ICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASD 123
           +C++ NV + A+ ETDE+YAQ+TLQP   +          L   S+   + FCK LT SD
Sbjct: 68  LCKVVNVELKAETETDEMYAQITLQPEPDQVDLPQLPEPPLQETSRPVVHSFCKILTPSD 127

Query: 124 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 183
           TSTHGGFSV RR A +  P+LD S+  P QELI +DLH  EW+F+HI+RGQP+RHLLTTG
Sbjct: 128 TSTHGGFSVLRRHANECLPALDMSMPTPTQELITKDLHGSEWRFKHIYRGQPRRHLLTTG 187

Query: 184 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAH 243
           WS FV++K+L+AGD+ +++ +E  Q  +G+RR ++  + MP+SV+SS SMH+G+LA+A+H
Sbjct: 188 WSTFVTSKKLIAGDAFVYLRSETGQQRVGVRRLVQKQSTMPASVISSQSMHLGVLASASH 247

Query: 244 AAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGT 303
           A  T+S F V++ PR S S++++ L KY+++       VGMRF+M FE ++  ++++ GT
Sbjct: 248 AIRTHSIFLVYYRPRLSQSQYIVRLNKYLESS-KIGFDVGMRFKMSFEGDDVPIKKFSGT 306

Query: 304 ITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL------TTFPMYPSLF 357
           +    DL P +W  S W+++KV WDE+T      RVS WEIEP        T P+ PS  
Sbjct: 307 VVDKGDLSP-QWQGSEWKTLKVKWDEATNLNGPERVSSWEIEPFDASAPAITMPVQPS-- 363

Query: 358 PLRLKRPWHPSTSSFNDNRDETASGLN 384
            ++ KRP             ETA GL+
Sbjct: 364 -MKNKRP------------RETAEGLD 377



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 8/112 (7%)

Query: 671 QIDQLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQL 729
           Q  Q    R+ +KV   G+ V R++D+     Y +L  E+G+MF I+       +  W++
Sbjct: 576 QSHQSCSGRSRIKVQMHGNDVCRAVDLGNLDGYEQLMGEVGEMFEIK-DLGSKEKEEWKV 634

Query: 730 VFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQ 781
            F++ EN+ + +G  PW+ F   V  I I S      +G++G     P  GQ
Sbjct: 635 TFINDENETMEVGAVPWQEFCQMVRKIVIHS------IGDRGHMEACPCLGQ 680


>gi|295844288|gb|ADG43141.1| auxin response factor 7 [Zea mays]
 gi|414875581|tpg|DAA52712.1| TPA: hypothetical protein ZEAMMB73_730460 [Zea mays]
          Length = 686

 Score =  330 bits (845), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 171/387 (44%), Positives = 244/387 (63%), Gaps = 23/387 (5%)

Query: 4   DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQL 63
           D + L  ELW ACAGPLV LP    RV YF QGH EQ+   T+  + +       +P ++
Sbjct: 8   DPEELFEELWRACAGPLVELPQTNERVFYFLQGHLEQLQEPTDPALLAEQIKMFQVPNKI 67

Query: 64  ICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASD 123
           +C++ NV + A+ ETDE+YAQ+TLQP   +          L   S+   + FCK LT SD
Sbjct: 68  LCKVVNVELKAETETDEMYAQITLQPEPDQVDLPQLPEPPLQETSRPVVHSFCKILTPSD 127

Query: 124 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 183
           TSTHGGFSV RR A +  P+LD S+  P QELI +DLH  EW+F+HI+RGQP+RHLLTTG
Sbjct: 128 TSTHGGFSVLRRHANECLPALDMSMPTPTQELITKDLHGSEWRFKHIYRGQPRRHLLTTG 187

Query: 184 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAH 243
           WS FV++K+L+AGD+ +++ +E  Q  +G+RR ++  + MP+SV+SS SMH+G+LA+A+H
Sbjct: 188 WSTFVTSKKLIAGDAFVYLRSETGQQRVGVRRLVQKQSTMPASVISSQSMHLGVLASASH 247

Query: 244 AAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGT 303
           A  T+S F V++ PR S S++++ L KY+++       VGMRF+M FE ++  ++++ GT
Sbjct: 248 AIRTHSIFLVYYRPRLSQSQYIVRLNKYLESS-KIGFDVGMRFKMSFEGDDVPIKKFSGT 306

Query: 304 ITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL------TTFPMYPSLF 357
           +    DL P +W  S W+++KV WDE+T      RVS WEIEP        T P+ PS  
Sbjct: 307 VVDKGDLSP-QWQGSEWKTLKVKWDEATNLNGPERVSSWEIEPFDASAPAITMPVQPS-- 363

Query: 358 PLRLKRPWHPSTSSFNDNRDETASGLN 384
            ++ KRP             ETA GL+
Sbjct: 364 -MKNKRP------------RETAEGLD 377



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 8/112 (7%)

Query: 671 QIDQLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQL 729
           Q  Q    R+ +KV   G+ V R++D+     Y +L  E+G+MF I+       +  W++
Sbjct: 576 QSHQSCSGRSRIKVQMHGNDVCRAVDLGNLDGYEQLMGEVGEMFEIK-DLGSKEKEEWKV 634

Query: 730 VFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQ 781
            F++ EN+ + +G  PW+ F   V  I I S      +G++G     P  GQ
Sbjct: 635 TFINDENETMEVGAVPWQEFCQMVRKIVIHS------IGDRGHMEACPCLGQ 680


>gi|115435540|ref|NP_001042528.1| Os01g0236300 [Oryza sativa Japonica Group]
 gi|75251164|sp|Q5NB85.1|ARFA_ORYSJ RecName: Full=Auxin response factor 1; AltName: Full=OsARF16
 gi|56783859|dbj|BAD81271.1| putative auxin response factor 20 [Oryza sativa Japonica Group]
 gi|113532059|dbj|BAF04442.1| Os01g0236300 [Oryza sativa Japonica Group]
 gi|213959154|gb|ACJ54911.1| auxin response factor [Oryza sativa Japonica Group]
 gi|215734875|dbj|BAG95597.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 699

 Score =  329 bits (843), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 170/376 (45%), Positives = 245/376 (65%), Gaps = 14/376 (3%)

Query: 2   IGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 61
           +GD + L +ELW ACAGPLV +P    RV YF QGH EQ+   T+  + +       +P 
Sbjct: 10  VGDPE-LFAELWRACAGPLVEVPQRDERVFYFLQGHLEQLQEPTDPALLAEQIKMFQVPY 68

Query: 62  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNY-FCKTLT 120
           +++C++ NV + A+ ETDEV+AQ+TLQP  P+++    +P        +P  + FCK LT
Sbjct: 69  KILCKVVNVELKAETETDEVFAQITLQP-DPDQENLPTLPDPPLPEQPRPVVHSFCKILT 127

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
            SDTSTHGGFSV RR A +  P LD S+  P QELI +DLH  EW+F+HI+RGQP+RHLL
Sbjct: 128 PSDTSTHGGFSVLRRHANECLPPLDMSMATPTQELITKDLHGSEWRFKHIYRGQPRRHLL 187

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 240
           TTGWS FV++K+L++GD+ +++ +E  +  +G+RR ++  + MP+SV+SS SMH+G+LA+
Sbjct: 188 TTGWSTFVTSKKLISGDAFVYLRSETGEQRVGVRRLVQKQSTMPASVISSQSMHLGVLAS 247

Query: 241 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 300
           A+HA  TNS F V++ PR S S++++ + KY+ A      +VGMRF+M FE E+  V+++
Sbjct: 248 ASHAIKTNSIFLVYYRPRLSQSQYIVSVNKYL-AASKVGFNVGMRFKMSFEGEDVPVKKF 306

Query: 301 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE------PLTTFPMYP 354
            GTI G  DL  ++WS S W+S+KV WDE T      RVS WEIE      P    P+  
Sbjct: 307 SGTIVGEGDLS-LQWSGSEWKSLKVQWDEVTNVNGPERVSPWEIETCDGTAPAINVPLQS 365

Query: 355 SLFPLRLKRPWHPSTS 370
           +    + KRP  PS +
Sbjct: 366 A---TKNKRPREPSET 378



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 50/90 (55%), Gaps = 6/90 (6%)

Query: 679 RTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 737
           RT +KV   G +VGR++D++    Y +L  EL +MF I+      L+  W++ F D E D
Sbjct: 595 RTRIKVQMHGNAVGRAVDLANLDGYEQLMNELEEMFNIKD-----LKQKWKVAFTDDEGD 649

Query: 738 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
            + +GDDPW  F   V  I +   ED +K+
Sbjct: 650 TMEVGDDPWLEFCQMVRKIVLYPIEDEKKI 679


>gi|356520917|ref|XP_003529106.1| PREDICTED: auxin response factor 9-like [Glycine max]
          Length = 664

 Score =  329 bits (843), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 177/366 (48%), Positives = 247/366 (67%), Gaps = 10/366 (2%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+   L  +LW ACAGP V +P  G RV YFPQGH EQ+  +TN+E++  IP +  L  +
Sbjct: 10  GEEDELYEQLWKACAGPHVEVPRTGQRVFYFPQGHMEQLEVSTNQELNQRIPLF-KLSSK 68

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           ++C++ NV + A+ ETDEVYAQ+TL P S + +  +  P    +P  +  + FCK LTAS
Sbjct: 69  ILCRVVNVHLLAEQETDEVYAQITLVPESNQTEPTSPDPCPAELPRPR-VHSFCKVLTAS 127

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSV R+ A +  P+LD S   P QEL+A+DL   EW+F+HIFRGQP+RHLLTT
Sbjct: 128 DTSTHGGFSVLRKHATECLPALDMSKSTPTQELVAKDLQGFEWRFKHIFRGQPRRHLLTT 187

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWS FV++KRLVAGD+ +F+     +L +G+RR     + MPSSV+SS SMH+G+LA A+
Sbjct: 188 GWSTFVTSKRLVAGDTFVFLRGNNGELRVGVRRIAPLQSSMPSSVISSQSMHLGVLATAS 247

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEES--SVRRY 300
           HA AT + F V++ PR   S+F++ + KY++A+ + + +VGMRF+M FE +ES  + +R+
Sbjct: 248 HAVATQTLFVVYYKPRT--SQFIVSVNKYLEAI-NQKCNVGMRFKMRFEGDESPENDKRF 304

Query: 301 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFP-- 358
            GTI G+ D+ P  W NS+WRS+KV WDE  +  R  RVS WEIE +       S  P  
Sbjct: 305 SGTILGVEDISP-HWVNSNWRSLKVQWDEPASFPRPDRVSSWEIEHILACVPTTSSQPAV 363

Query: 359 LRLKRP 364
           ++ KRP
Sbjct: 364 IKNKRP 369



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 59/91 (64%), Gaps = 3/91 (3%)

Query: 678 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           +R+  KV   G +VGR++D++    Y++L +EL +MF I+G+ +   R+ W+ VF D E 
Sbjct: 553 SRSCTKVQMQGVAVGRAVDLTTLDGYDQLVDELEKMFDIKGQLQH--RNKWETVFTDDEG 610

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           D++L+GDDPW  F + V  I I S +DV K+
Sbjct: 611 DMMLVGDDPWPEFCNMVKRIFICSSQDVHKL 641


>gi|79325241|ref|NP_001031706.1| auxin response factor 9 [Arabidopsis thaliana]
 gi|332659436|gb|AEE84836.1| auxin response factor 9 [Arabidopsis thaliana]
          Length = 636

 Score =  328 bits (842), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 179/366 (48%), Positives = 240/366 (65%), Gaps = 22/366 (6%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNK-EVDSHIPNYPNLPPQLICQ 66
           L  ELW  CAGPLV +P    RV YFPQGH EQ+ A+T + ++++  P +  LPP+++C 
Sbjct: 9   LYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLFV-LPPKILCN 67

Query: 67  LHNVTMHADVETDEVYAQMTL--------QPLSPEEQKDTFVPIELGIPSKQPTNYFCKT 118
           + NV++ A+ +TDEVYAQ+TL        +P+SP+       P EL  P     + F K 
Sbjct: 68  VMNVSLQAEKDTDEVYAQITLIPVGTEVDEPMSPDPS-----PPELQRPK---VHSFSKV 119

Query: 119 LTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRH 178
           LTASDTSTHGGFSV R+ A +  P LD + Q P QEL+A D+H  +WKF+HIFRGQP+RH
Sbjct: 120 LTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRH 179

Query: 179 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLL 238
           LLTTGWS FV++KRLVAGD+ +F+  E  +L +G+RRA    + MPSSV+SS SMH+G+L
Sbjct: 180 LLTTGWSTFVTSKRLVAGDTFVFLRGENGELRVGVRRANLQQSSMPSSVISSHSMHLGVL 239

Query: 239 AAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVR 298
           A A HA  T + F V++ PR   S+F+I L KY++A+   + SVGMRF+M FE E+S  R
Sbjct: 240 ATARHATQTKTMFIVYYKPRT--SQFIISLNKYLEAM-SNKFSVGMRFKMRFEGEDSPER 296

Query: 299 RYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFP 358
           RY GT+ G+ D  P  W +S WR ++V WDE  +  R  +VS WEIEP       P    
Sbjct: 297 RYSGTVIGVKDCSP-HWKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVNSENVPKSVM 355

Query: 359 LRLKRP 364
           L+ KRP
Sbjct: 356 LKNKRP 361



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 6/163 (3%)

Query: 609 SQNSVVFGVHIDSSGLLLPTTVSSFTTSVD---PGVSSMPLGDSGFHNSMYGCMQDSSEL 665
           + N  +FG+ + SS L +P   ++    ++   P + S     S          Q+ +E 
Sbjct: 448 TANYRLFGIDLMSSSLAVPEEKTAPMRPINISKPTMDSHSDPKSEISKVSEEKKQEPAEG 507

Query: 666 LHNVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLR 724
                Q  Q + TR+  KV   G  VGR++D++    YNEL +++ ++F I+G+     R
Sbjct: 508 SPKEVQSKQSSSTRSRTKVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDIKGELRS--R 565

Query: 725 SGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           + W++VF D E D++L+GDDPW  F + V  I I S E+V+KM
Sbjct: 566 NQWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKM 608


>gi|19352053|dbj|BAB85920.1| auxin response factor 16 [Oryza sativa]
          Length = 695

 Score =  328 bits (842), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 170/376 (45%), Positives = 245/376 (65%), Gaps = 14/376 (3%)

Query: 2   IGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 61
           +GD + L +ELW ACAGPLV +P    RV YF QGH EQ+   T+  + +       +P 
Sbjct: 6   VGDPE-LFAELWRACAGPLVEVPQRDERVFYFLQGHLEQLQEPTDPALLAEQIKMFQVPY 64

Query: 62  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNY-FCKTLT 120
           +++C++ NV + A+ ETDEV+AQ+TLQP  P+++    +P        +P  + FCK LT
Sbjct: 65  KILCKVVNVELKAETETDEVFAQITLQP-DPDQENLPTLPDPPLPEQPRPVVHSFCKILT 123

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
            SDTSTHGGFSV RR A +  P LD S+  P QELI +DLH  EW+F+HI+RGQP+RHLL
Sbjct: 124 PSDTSTHGGFSVLRRHANECLPPLDMSMATPTQELITKDLHGSEWRFKHIYRGQPRRHLL 183

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 240
           TTGWS FV++K+L++GD+ +++ +E  +  +G+RR ++  + MP+SV+SS SMH+G+LA+
Sbjct: 184 TTGWSTFVTSKKLISGDAFVYLRSETGEQRVGVRRLVQKQSTMPASVISSQSMHLGVLAS 243

Query: 241 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 300
           A+HA  TNS F V++ PR S S++++ + KY+ A      +VGMRF+M FE E+  V+++
Sbjct: 244 ASHAIKTNSIFLVYYRPRLSQSQYIVSVNKYL-AASKVGFNVGMRFKMSFEGEDVPVKKF 302

Query: 301 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE------PLTTFPMYP 354
            GTI G  DL  ++WS S W+S+KV WDE T      RVS WEIE      P    P+  
Sbjct: 303 SGTIVGEGDLS-LQWSGSEWKSLKVQWDEVTNVNGPERVSPWEIETCDGTAPAINVPLQS 361

Query: 355 SLFPLRLKRPWHPSTS 370
           +    + KRP  PS +
Sbjct: 362 A---TKNKRPREPSET 374



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 50/90 (55%), Gaps = 6/90 (6%)

Query: 679 RTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 737
           RT +KV   G +VGR++D++    Y +L  EL +MF I+      L+  W++ F D E D
Sbjct: 591 RTRIKVQMHGNAVGRAVDLANLDGYEQLMNELEEMFNIKD-----LKQKWKVAFTDDEGD 645

Query: 738 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
            + +GDDPW  F   V  I +   ED +K+
Sbjct: 646 TMEVGDDPWLEFCQMVRKIVLYPIEDEKKI 675


>gi|15233647|ref|NP_194129.1| auxin response factor 9 [Arabidopsis thaliana]
 gi|46576670|sp|Q9XED8.1|ARFI_ARATH RecName: Full=Auxin response factor 9
 gi|4580575|gb|AAD24427.1|AF082176_1 auxin response factor 9 [Arabidopsis thaliana]
 gi|12744967|gb|AAK06863.1|AF344312_1 auxin response factor 9 [Arabidopsis thaliana]
 gi|4972102|emb|CAB43898.1| auxin response factor 9 (ARF9) [Arabidopsis thaliana]
 gi|7269247|emb|CAB81316.1| auxin response factor 9 (ARF9) [Arabidopsis thaliana]
 gi|332659435|gb|AEE84835.1| auxin response factor 9 [Arabidopsis thaliana]
          Length = 638

 Score =  328 bits (842), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 179/366 (48%), Positives = 240/366 (65%), Gaps = 22/366 (6%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNK-EVDSHIPNYPNLPPQLICQ 66
           L  ELW  CAGPLV +P    RV YFPQGH EQ+ A+T + ++++  P +  LPP+++C 
Sbjct: 9   LYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLFV-LPPKILCN 67

Query: 67  LHNVTMHADVETDEVYAQMTL--------QPLSPEEQKDTFVPIELGIPSKQPTNYFCKT 118
           + NV++ A+ +TDEVYAQ+TL        +P+SP+       P EL  P     + F K 
Sbjct: 68  VMNVSLQAEKDTDEVYAQITLIPVGTEVDEPMSPDPS-----PPELQRPK---VHSFSKV 119

Query: 119 LTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRH 178
           LTASDTSTHGGFSV R+ A +  P LD + Q P QEL+A D+H  +WKF+HIFRGQP+RH
Sbjct: 120 LTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRH 179

Query: 179 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLL 238
           LLTTGWS FV++KRLVAGD+ +F+  E  +L +G+RRA    + MPSSV+SS SMH+G+L
Sbjct: 180 LLTTGWSTFVTSKRLVAGDTFVFLRGENGELRVGVRRANLQQSSMPSSVISSHSMHLGVL 239

Query: 239 AAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVR 298
           A A HA  T + F V++ PR   S+F+I L KY++A+   + SVGMRF+M FE E+S  R
Sbjct: 240 ATARHATQTKTMFIVYYKPRT--SQFIISLNKYLEAM-SNKFSVGMRFKMRFEGEDSPER 296

Query: 299 RYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFP 358
           RY GT+ G+ D  P  W +S WR ++V WDE  +  R  +VS WEIEP       P    
Sbjct: 297 RYSGTVIGVKDCSP-HWKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVNSENVPKSVM 355

Query: 359 LRLKRP 364
           L+ KRP
Sbjct: 356 LKNKRP 361



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 6/163 (3%)

Query: 609 SQNSVVFGVHIDSSGLLLPTTVSSFTTSVD---PGVSSMPLGDSGFHNSMYGCMQDSSEL 665
           + N  +FG+ + SS L +P   ++    ++   P + S     S          Q+ +E 
Sbjct: 450 TANYRLFGIDLMSSSLAVPEEKTAPMRPINISKPTMDSHSDPKSEISKVSEEKKQEPAEG 509

Query: 666 LHNVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLR 724
                Q  Q + TR+  KV   G  VGR++D++    YNEL +++ ++F I+G+     R
Sbjct: 510 SPKEVQSKQSSSTRSRTKVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDIKGELRS--R 567

Query: 725 SGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           + W++VF D E D++L+GDDPW  F + V  I I S E+V+KM
Sbjct: 568 NQWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKM 610


>gi|291196861|emb|CAX63106.1| ETTIN protein [Cabomba aquatica]
          Length = 827

 Score =  327 bits (838), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 177/372 (47%), Positives = 236/372 (63%), Gaps = 26/372 (6%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
           CL  ELWHACAGPL+SLP  G+ VVYFPQGH EQ     ++  +SH   Y +LPPQ+IC+
Sbjct: 37  CL--ELWHACAGPLISLPQKGSVVVYFPQGHLEQ-----HQVQESHTRTY-DLPPQIICR 88

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIEL-----------GIPSKQPTNYF 115
           + +V + A+V  DE+YAQ++L         D  V   L           GI    P + F
Sbjct: 89  VVDVKLQAEVSNDELYAQVSLLAEDEVGFLDESVVRSLNGGEEVSEENQGIRRTIP-HMF 147

Query: 116 CKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQP 175
           CKTLTASDTSTHGGFSVPRRAAE  FP LD+S Q P+QEL A+DL+   W+FRHI+RGQP
Sbjct: 148 CKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELTAKDLYGFIWRFRHIYRGQP 207

Query: 176 KRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR-PPTVMPSSVLSSDSMH 234
           +RHLLTTGWS F + K+L  GD+VLF+  +  +L LGIRRA R     +P + L      
Sbjct: 208 RRHLLTTGWSSFANKKKLKPGDAVLFLRVDDGELRLGIRRATRQSQCCVPYTGLLCQLSR 267

Query: 235 IGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEE 294
           + +L+  A A +    F +++NPRASP+EF++P  KY+++  H   S+GMR ++  ETE+
Sbjct: 268 VNMLSMVADALSVKKLFHIYYNPRASPAEFMVPYWKYLRSCSHP-FSMGMRLKIRVETED 326

Query: 295 SSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYP 354
           +  +RY G ITG+ D+DP+RW NS WR + V WD++       RVS WEIE  +    + 
Sbjct: 327 AVEKRYTGHITGVGDVDPIRWPNSKWRCLVVRWDDNADTCLHDRVSPWEIEQSSLVSSFS 386

Query: 355 SLFPLR--LKRP 364
             FPL+   KRP
Sbjct: 387 --FPLKSTSKRP 396



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 37/88 (42%), Positives = 58/88 (65%), Gaps = 2/88 (2%)

Query: 678 TRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           TR   KVYK  S VGR++D+++ + Y++L  EL ++  +EG   DP R GWQ+V+ D  +
Sbjct: 720 TRRCTKVYKQESLVGRAVDLTKLTGYDDLIFELERLLDMEGLLRDP-RKGWQVVYTDNVS 778

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPEDV 764
           D++L+GD+PW+ F   V  I I + E+V
Sbjct: 779 DMMLVGDEPWQEFCDIVSKIHIFTREEV 806


>gi|242088827|ref|XP_002440246.1| hypothetical protein SORBIDRAFT_09g028450 [Sorghum bicolor]
 gi|241945531|gb|EES18676.1| hypothetical protein SORBIDRAFT_09g028450 [Sorghum bicolor]
          Length = 739

 Score =  327 bits (837), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 171/360 (47%), Positives = 223/360 (61%), Gaps = 27/360 (7%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G   CL  ELWHACAGP+  LP  GT VVY PQGH E +                 LPP 
Sbjct: 50  GAAVCL--ELWHACAGPVAPLPRKGTVVVYLPQGHLEHLGDAAAAAAGGAPAPA-ALPPH 106

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP--------------- 107
           + C++ +VT+HAD  TDEVYAQ+ L      E +D    +  G                 
Sbjct: 107 VFCRVVDVTLHADASTDEVYAQLALV----AENEDVARRLRGGSEDGSAGDGDDGEAVKQ 162

Query: 108 --SKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEW 165
             S+ P + FCKTLTASDTSTHGGFSVPRRAAE  FP LD+S Q P+QEL+A+DLH  EW
Sbjct: 163 RFSRMP-HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEW 221

Query: 166 KFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPS 225
           +FRHI+RGQP+RHLLTTGWS FV+ K+LV+GD+VLF+  +  +L LG+RRA +       
Sbjct: 222 RFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGVRRAAQLKNGSAF 281

Query: 226 SVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMR 285
             L +   ++G LA  AHA AT S F +++NPR S SEF+IP +K++K+ F  + S G+R
Sbjct: 282 PALYNQCSNLGSLANVAHAVATKSVFHIYYNPRLSQSEFIIPYSKFMKS-FSQQFSAGLR 340

Query: 286 FRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 345
           F+M +E++++S RR  G I GI D DP+ W  S W+ + V WD+     R  R+S WEIE
Sbjct: 341 FKMRYESDDASERRCTGVIAGIGDADPM-WRGSKWKCLMVRWDDDVDFRRPNRISPWEIE 399


>gi|218187833|gb|EEC70260.1| hypothetical protein OsI_01065 [Oryza sativa Indica Group]
          Length = 699

 Score =  326 bits (835), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 169/376 (44%), Positives = 244/376 (64%), Gaps = 14/376 (3%)

Query: 2   IGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 61
           +GD + L + LW ACAGPLV +P    RV YF QGH EQ+   T+  + +       +P 
Sbjct: 10  VGDPE-LFAVLWRACAGPLVEVPQRDERVFYFLQGHLEQLQEPTDPALLAEQIKMFQVPY 68

Query: 62  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNY-FCKTLT 120
           +++C++ NV + A+ ETDEV+AQ+TLQP  P+++    +P        +P  + FCK LT
Sbjct: 69  KILCKVVNVELKAETETDEVFAQITLQP-DPDQENLPTLPDPPLPEQPRPVVHSFCKILT 127

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
            SDTSTHGGFSV RR A +  P LD S+  P QELI +DLH  EW+F+HI+RGQP+RHLL
Sbjct: 128 PSDTSTHGGFSVLRRHANECLPPLDMSMATPTQELITKDLHGSEWRFKHIYRGQPRRHLL 187

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 240
           TTGWS FV++K+L++GD+ +++ +E  +  +G+RR ++  + MP+SV+SS SMH+G+LA+
Sbjct: 188 TTGWSTFVTSKKLISGDAFVYLRSETGEQRVGVRRLVQKQSTMPASVISSQSMHLGVLAS 247

Query: 241 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 300
           A+HA  TNS F V++ PR S S++++ + KY+ A      +VGMRF+M FE E+  V+++
Sbjct: 248 ASHAIKTNSIFLVYYRPRLSQSQYIVSVNKYL-AASKVGFNVGMRFKMSFEGEDVPVKKF 306

Query: 301 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE------PLTTFPMYP 354
            GTI G  DL  ++WS S W+S+KV WDE T      RVS WEIE      P    P+  
Sbjct: 307 SGTIVGEGDLS-LQWSGSEWKSLKVQWDEVTNVNGPERVSPWEIETCDGTAPAINVPLQS 365

Query: 355 SLFPLRLKRPWHPSTS 370
           +    + KRP  PS +
Sbjct: 366 A---TKNKRPREPSET 378



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 50/90 (55%), Gaps = 6/90 (6%)

Query: 679 RTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 737
           RT +KV   G +VGR++D++    Y +L  EL +MF I+      L+  W++ F D E D
Sbjct: 595 RTRIKVQMHGNAVGRAVDLANLDGYEQLMNELEEMFNIKD-----LKQKWKVAFTDDEGD 649

Query: 738 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
            + +GDDPW  F   V  I +   ED +K+
Sbjct: 650 TMEVGDDPWLEFCQMVRKIVLYPIEDEKKI 679


>gi|224103217|ref|XP_002334078.1| predicted protein [Populus trichocarpa]
 gi|222869514|gb|EEF06645.1| predicted protein [Populus trichocarpa]
          Length = 185

 Score =  324 bits (831), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 149/171 (87%), Positives = 160/171 (93%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ + LNSELWHACAGPLVSLP VG+RVVYF QGHSEQVAA+TNKEVD+ IPNYP+LPPQ
Sbjct: 15  GEKRVLNSELWHACAGPLVSLPAVGSRVVYFAQGHSEQVAASTNKEVDARIPNYPSLPPQ 74

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           LICQLHNVTMHADVETDEVYAQ+TLQPLSP+EQKD ++P +LG PSKQPTNYFCKTLTAS
Sbjct: 75  LICQLHNVTMHADVETDEVYAQLTLQPLSPQEQKDAYLPADLGTPSKQPTNYFCKTLTAS 134

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRG 173
           DTSTHGGFSVPRRAAEKVFP LDFS QPPAQELIARDLHD EWKFRHIFRG
Sbjct: 135 DTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRG 185


>gi|350537897|ref|NP_001234316.1| auxin response factor 3 [Solanum lycopersicum]
 gi|85069277|gb|ABC69710.1| auxin response factor 3 [Solanum lycopersicum]
          Length = 747

 Score =  324 bits (831), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 173/367 (47%), Positives = 230/367 (62%), Gaps = 29/367 (7%)

Query: 11  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYP----NLPPQLICQ 66
           ELWHACAGPL+SLP  G+ VVY PQGH E            H+  YP    NLPP + C+
Sbjct: 55  ELWHACAGPLISLPKKGSAVVYLPQGHLE------------HLSEYPSIACNLPPHVFCR 102

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPE-EQK---------DTFVPIELGIPSKQPTNYFC 116
           + +V + AD  TDEVYAQ++L P + + EQK              IE    S  P + FC
Sbjct: 103 VVDVKLQADAATDEVYAQVSLVPDNQQIEQKWKDGDIDADIEEEEIEGAGKSITP-HMFC 161

Query: 117 KTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPK 176
           KTLTASDTSTHGGFSVPRRAAE  F  LD+  Q P+QEL+A+DLH +EWKFRHI+RGQP+
Sbjct: 162 KTLTASDTSTHGGFSVPRRAAEDCFAPLDYRQQRPSQELVAKDLHGIEWKFRHIYRGQPR 221

Query: 177 RHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIG 236
           RHLLTTGWS FV+ K+LV+GD+VLF+     +L LG+RRA +  T        S  +++ 
Sbjct: 222 RHLLTTGWSAFVNKKKLVSGDAVLFLRTGDGELRLGVRRAAQAKTCSSYLAPCSKPLNVS 281

Query: 237 LLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS 296
            +  A +  ++ + F + +NPR S S+F++P  K+ K + H   S GMRF+M  ETE+++
Sbjct: 282 GIVDAVNVISSRNAFNICYNPRDSSSDFIVPYHKFSKTLAHP-FSAGMRFKMRVETEDAA 340

Query: 297 VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSL 356
            +R+ G + G+S++DPVRW  S WR + V WD+     R  RVS WEIEP  + P+  SL
Sbjct: 341 EQRFTGLVVGVSNVDPVRWPGSKWRCLLVRWDDLDV-SRHNRVSPWEIEPSGSAPVPSSL 399

Query: 357 FPLRLKR 363
                KR
Sbjct: 400 VMPSAKR 406


>gi|356503887|ref|XP_003520732.1| PREDICTED: auxin response factor 7-like, partial [Glycine max]
          Length = 1043

 Score =  324 bits (830), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 179/386 (46%), Positives = 239/386 (61%), Gaps = 25/386 (6%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSH--IPNYPNLPPQLIC 65
           L +ELW ACAG  V +P V  RV YFPQGH EQVAA T  + DSH  IP Y +LP +++C
Sbjct: 411 LYTELWRACAGSFVYVPRVDDRVFYFPQGHLEQVAAYTQNQPDSHLEIPVY-DLPSKILC 469

Query: 66  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTF-----VPIELGIPSKQPTNYFCKTLT 120
           ++ NV + A+  +DEVYAQ+TL    PE QKD       V I+  IPS+     F K LT
Sbjct: 470 KIMNVELKAEAYSDEVYAQVTL---VPEVQKDNLCFEEEVNID-QIPSRNAAYSFSKILT 525

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
            SDTSTHGGFSVP++ A++ FP LD +LQ PAQE++A+DL+  EW+FRHI+RGQPKRHLL
Sbjct: 526 PSDTSTHGGFSVPKKYADECFPPLDMTLQTPAQEIVAKDLNGFEWRFRHIYRGQPKRHLL 585

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVM--PSSVLSSDSMHIGLL 238
           T+GWS+FV+AK+LVAGDS +F+  E  +L +GIRRA    + +   SS++S  SM +G+L
Sbjct: 586 TSGWSLFVNAKKLVAGDSCIFVRGESGELRVGIRRAAENLSNISQSSSLISGHSMQLGIL 645

Query: 239 AAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVR 298
             A++A    + F V++ P  +P EF++ L  Y+K+       +G R +M  E EE S+R
Sbjct: 646 TNASNAVGNRTMFLVYYRPWTNPFEFIVHLQTYLKSTLQD-YPIGTRVQMQHEVEE-SLR 703

Query: 299 RYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQP-RVSLWEIEPLTTFPMYPSLF 357
           R  GTI G  D+D +RW  S WR +KV WD     +  P RV  W IEPL +      + 
Sbjct: 704 RLAGTIIGNEDIDSIRWPGSAWRRLKVQWDAIVEDKMHPERVCPWWIEPLESAKEKKQVP 763

Query: 358 PLRLKRPWH--------PSTSSFNDN 375
            L  K+  H        P  S F  N
Sbjct: 764 ALPTKKKGHALLNQRSLPGISGFGKN 789



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/70 (41%), Positives = 43/70 (61%), Gaps = 2/70 (2%)

Query: 679  RTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 737
            R+  KV K G ++GR++D++RF+ Y EL  EL  MF  +G       SGW +  +D E D
Sbjct: 965  RSCTKVLKLGNALGRAVDLARFNGYTELIAELDSMFDFQGTLISG-GSGWHVTCLDDEGD 1023

Query: 738  VLLLGDDPWE 747
            ++ LGD PW+
Sbjct: 1024 MMQLGDYPWQ 1033


>gi|357132570|ref|XP_003567902.1| PREDICTED: auxin response factor 15-like [Brachypodium distachyon]
          Length = 730

 Score =  324 bits (830), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 171/350 (48%), Positives = 223/350 (63%), Gaps = 23/350 (6%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
           CL  ELWHACAGP+  +P  G+ VVYFPQGH EQ+            P+       + C+
Sbjct: 66  CL--ELWHACAGPVAPMPRKGSVVVYFPQGHLEQLGGDAAAANAPVPPH-------VFCR 116

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP-----------SKQPTNYF 115
           + +V++HAD  TDEVYAQ++L P + E  +      E G             S+ P + F
Sbjct: 117 VVDVSLHADASTDEVYAQLSLLPENEEAVRRKREGAEEGSGGEDGETGKQRFSRMP-HMF 175

Query: 116 CKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQP 175
           CKTLTASDTSTHGGFSVPRRAAE  FP LD+S Q P+QEL A+DLH  EWKFRHI+RGQP
Sbjct: 176 CKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELAAKDLHGTEWKFRHIYRGQP 235

Query: 176 KRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHI 235
           +RHLLTTGWS FV+ K+LV+GD+VLF+  +  +L LG+RRA +  T      L S   ++
Sbjct: 236 RRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGVRRAAQLKTGSAFPGLYSQCSNL 295

Query: 236 GLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEES 295
           G LA  AHA AT   F +++NPR S SEF++P  K+ K++     SVG+RF+M +E+E++
Sbjct: 296 GTLANVAHAVATKGMFRIYYNPRLSQSEFIVPYWKFTKSLSQP-FSVGLRFKMRYESEDA 354

Query: 296 SVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 345
           + RRY G ITG  D DP+ W  S W+ + V WD+     R  RVS WEIE
Sbjct: 355 AERRYTGIITGTGDADPM-WRGSKWKCLLVRWDDDVECRRPNRVSPWEIE 403


>gi|255540071|ref|XP_002511100.1| Auxin response factor, putative [Ricinus communis]
 gi|223550215|gb|EEF51702.1| Auxin response factor, putative [Ricinus communis]
          Length = 844

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 173/365 (47%), Positives = 240/365 (65%), Gaps = 13/365 (3%)

Query: 6   KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 65
           K L +ELW+ACAGPLV++P     V YFPQGH EQV A+TN+  D  +P Y NLP +++C
Sbjct: 50  KALYTELWNACAGPLVTVPRENELVYYFPQGHIEQVEASTNQLADQQMPVY-NLPSKILC 108

Query: 66  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTS 125
           ++ NV + A+ +TDEV+AQ+TL P   +++           P +   + FCKTLTASDTS
Sbjct: 109 RVINVQLKAEPDTDEVFAQVTLLPEPIQDENAVKKDPPQPPPPRFHVHSFCKTLTASDTS 168

Query: 126 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 185
           THGGFSV RR A++  P L  S+   + E + R L D+      +  GQP+RHLL +GWS
Sbjct: 169 THGGFSVLRRHADECLPPL-VSIN--STEFV-RCLIDIIM----LIPGQPRRHLLQSGWS 220

Query: 186 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 245
           VFVS+KRLVAGD+ +F+  E  +L +G+RRA+R    +PSSV+SS SMH+G+LA A HA 
Sbjct: 221 VFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAI 280

Query: 246 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 305
           +T + FTV++ PR SP+EF++P  +Y+++V      +GMRF+M FE EE+  +R+ GTI 
Sbjct: 281 STGTLFTVYYKPRTSPAEFIVPFDRYMESV-KNNYCIGMRFKMRFEGEEAPEQRFTGTIV 339

Query: 306 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPW 365
           GI D D  RW  S WRS+KV WDE++   R  RVS W +EP       P+L PL + RP 
Sbjct: 340 GIEDADSKRWRESKWRSLKVRWDETSTIPRPDRVSPWSVEPALA---PPALNPLPVPRPK 396

Query: 366 HPSTS 370
            P ++
Sbjct: 397 RPRSN 401



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/142 (35%), Positives = 78/142 (54%), Gaps = 7/142 (4%)

Query: 627 PTTVSSFTTSVDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYK 686
           P  + S   S  P VS M   D   H   +   Q       ++    Q   TR+  KV+K
Sbjct: 671 PRALESDQRSEQPRVSKM--ADDNEHEKQF---QSGHLHTRDIQGKTQTGSTRSCTKVHK 725

Query: 687 SG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDP 745
            G ++GRS+D+++F++Y+EL  EL ++F   G+   P +  W +V+ D E D++L+GDDP
Sbjct: 726 QGIALGRSVDLAKFNNYDELIAELDRLFEFGGELISP-KKNWLIVYTDDEGDMMLVGDDP 784

Query: 746 WEAFVSNVWYIKILSPEDVQKM 767
           W+ FV  V  I I + E+VQKM
Sbjct: 785 WQEFVGMVRKIFIYTREEVQKM 806


>gi|379323216|gb|AFD01307.1| auxin response factor 9-1 [Brassica rapa subsp. pekinensis]
          Length = 602

 Score =  322 bits (826), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 170/347 (48%), Positives = 237/347 (68%), Gaps = 20/347 (5%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           +  ELW   AGPLV +P    RV YFPQGH EQ+ A+T +++++  P + +LPP+++C++
Sbjct: 1   MYEELWKLSAGPLVDVPQAEERVYYFPQGHMEQLEASTQQDLNTMKPLF-DLPPKILCRV 59

Query: 68  HNVTMHADVETDEVYAQMTL-------QPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLT 120
            NV + A+ +TDEVYAQ+ L       +P+SP+       P EL  P     + F K LT
Sbjct: 60  MNVRLQAEKDTDEVYAQIMLMPEGTVDEPMSPDPS-----PPELQKPK---FHSFTKVLT 111

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
           ASDTSTHGGFSV R+ A +  P LD + Q P QEL+A D+H  +WKF+HIFRGQP+RHLL
Sbjct: 112 ASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYKWKFKHIFRGQPRRHLL 171

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 240
           TTGWS FV++K+LVAGD+ +F+  E  +L +G+RRA R  + MPSSV+SS SMH+G+LA 
Sbjct: 172 TTGWSTFVTSKKLVAGDTFVFLRGENGELRVGVRRANRQQSSMPSSVISSHSMHLGVLAT 231

Query: 241 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 300
           A HA  T S FTV++ PR   S+F++ L KY++A+ +++ SVGMRF+M FE ++S  RR+
Sbjct: 232 ACHATQTRSMFTVYYKPRT--SQFILSLHKYLEAM-NSKFSVGMRFKMRFEGDDSPERRF 288

Query: 301 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 347
            GT+ G+ D  P  W +S WRS+ V WDE  +  R  +VS WE+EP 
Sbjct: 289 SGTVVGVQDCSP-HWKDSKWRSLIVNWDEPASFTRPDKVSPWEMEPF 334



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 108/217 (49%), Gaps = 25/217 (11%)

Query: 564 QQFPQQSLGSKYEPSQVRDFVHSMSLPSSYNGKDA-AVGTENCNTDSQNSVVFGVHIDSS 622
            +F Q  + S+  P Q  D+   +S  S+ NG+    V  +   T + +  +FG+ + SS
Sbjct: 373 HEFAQSCITSQRNPPQNSDW--PVSPYSTLNGQMVFPVEQKKPETTTASCRLFGIDLMSS 430

Query: 623 GL---------LLPTTVS--SFTTSVDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQ 671
            L         + P  ++  +  ++ DP      L +           Q+ ++      Q
Sbjct: 431 SLPAHEEKTAPMRPINITKPTLDSNADPKSEISKLSEEK--------KQEPAQASPKEVQ 482

Query: 672 IDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLV 730
             Q+  +R+  KV   G  VGR++D++  + Y EL ++L ++F IEG+ +   R+ W++V
Sbjct: 483 SKQINSSRSRTKVQMQGVPVGRAVDLTLINGYVELIDDLEKLFDIEGELKS--RNQWEIV 540

Query: 731 FVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           F D E D++L+GDDPW  F + V  I I S E+V+KM
Sbjct: 541 FTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKM 577


>gi|326528225|dbj|BAJ93294.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 731

 Score =  322 bits (825), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 169/349 (48%), Positives = 223/349 (63%), Gaps = 17/349 (4%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
           CL  ELWHACAGP+  +P  G+ VVY PQGH + +    +    +       +PP + C+
Sbjct: 66  CL--ELWHACAGPVAPMPRKGSVVVYLPQGHLDHLG---DAPAHAAASPAAAVPPHVFCR 120

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPE------EQKDTFVPIELGIPSKQP----TNYFC 116
           + +VT+HAD  TDEVYAQ++L P + E      E  D     E G   KQ      + FC
Sbjct: 121 VVDVTLHADATTDEVYAQLSLLPENEELVRRMREATDDVSGGEDGETVKQRFARMPHMFC 180

Query: 117 KTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPK 176
           KTLTASDTSTHGGFS PRRAAE  FP LD++ Q P+QEL+A+DLH  EWKFRHI+RGQP+
Sbjct: 181 KTLTASDTSTHGGFSAPRRAAEDCFPHLDYNQQRPSQELVAKDLHGTEWKFRHIYRGQPR 240

Query: 177 RHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIG 236
           RHLLTTGWS FV+ K+LV+GD+VLF+  +  +L LG+RRA++         L S   ++G
Sbjct: 241 RHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGVRRAVQLKNGSAFPALYSQCSNLG 300

Query: 237 LLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS 296
            LA   HA +T S F +F+NPR S SEF++P  K+ K++     SVG RF+M +E+E+++
Sbjct: 301 TLANVTHAVSTKSMFQIFYNPRLSQSEFIVPYWKFTKSISQP-FSVGWRFKMRYESEDAA 359

Query: 297 VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 345
            RRY G ITG  D DP RW  S W+ + V WD+     R  R+S WEIE
Sbjct: 360 ERRYTGIITGTVDADP-RWRGSKWKCLLVRWDDDGEFRRPNRLSPWEIE 407


>gi|255564663|ref|XP_002523326.1| Auxin response factor, putative [Ricinus communis]
 gi|223537414|gb|EEF39042.1| Auxin response factor, putative [Ricinus communis]
          Length = 667

 Score =  322 bits (824), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 160/309 (51%), Positives = 218/309 (70%), Gaps = 8/309 (2%)

Query: 40  QVAATTNKEVDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTF 99
           Q+ A+TN+E+   IP + NLP +++C++ ++ + A+ ETDEVYAQ+TL P    +Q +  
Sbjct: 66  QLEASTNQELTQQIPKF-NLPSKILCRVVHIHLLAEQETDEVYAQITLHP--EVDQTEPT 122

Query: 100 VPIELG-IPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIAR 158
            P +    P K+P + FCK LTASDTSTHGGFSV R+ A +  P LD +   P QEL+A+
Sbjct: 123 SPDQCTPEPQKRPVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMNQSIPTQELVAK 182

Query: 159 DLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR 218
           DLH  EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ ++  +L +G+RR  R
Sbjct: 183 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRSDNGELRVGVRRLAR 242

Query: 219 PPTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHT 278
             + MPSSV+SS SMH+G+LA A+HA  T + F V++ PR   S+F+I L KY++AV H 
Sbjct: 243 QQSPMPSSVISSQSMHLGVLATASHAVTTQTLFVVYYKPRT--SQFIIGLNKYLEAVNHG 300

Query: 279 RVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPR 338
             S+GMRF+M FE E+S  RR+MGTI G+ D  P  WS S WRS+K+ WDE    +R  R
Sbjct: 301 -FSLGMRFKMRFEGEDSPERRFMGTIVGVGDFSP-EWSGSKWRSLKIQWDEPATVQRPDR 358

Query: 339 VSLWEIEPL 347
           VS WEIEP 
Sbjct: 359 VSPWEIEPF 367



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/93 (40%), Positives = 56/93 (60%), Gaps = 3/93 (3%)

Query: 676 TPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDR 734
           T TRT  KV   G +VGR++D++    Y +L +EL ++F I+G+     R  W +VF D 
Sbjct: 549 TSTRTRTKVQMQGVAVGRAVDLTALKGYGDLIKELEELFEIKGELS--TREKWAVVFTDD 606

Query: 735 ENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           E D++L+GDDPW  F   V  I I S E+ +K+
Sbjct: 607 EGDMMLVGDDPWREFCKMVRKILIYSSEEAKKL 639


>gi|357520595|ref|XP_003630586.1| Auxin response factor-like protein [Medicago truncatula]
 gi|355524608|gb|AET05062.1| Auxin response factor-like protein [Medicago truncatula]
          Length = 733

 Score =  321 bits (823), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 159/315 (50%), Positives = 218/315 (69%), Gaps = 5/315 (1%)

Query: 53  IPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPT 112
           +P Y +L P+++C++ NV + A+ +TDEV+AQ+TL P   +++           P +   
Sbjct: 1   MPVY-DLRPKILCRVINVMLKAEPDTDEVFAQVTLVPEPNQDENAVEKEAPPAPPPRFHV 59

Query: 113 NYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFR 172
           + FCKTLTASDTSTHGGFSV RR A++  P LD S QPP QEL+A+DLH  EW+FRHIFR
Sbjct: 60  HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFRHIFR 119

Query: 173 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDS 232
           GQP+RHLL +GWSVFVS+KRLVAGD+ +F+  E  +L +G+RRA+R    +PSSV+SS S
Sbjct: 120 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHS 179

Query: 233 MHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFET 292
           MH+G+LA A HA  T + FTV++ PR SP+EF++P  +Y++++     ++GMRF+M FE 
Sbjct: 180 MHLGVLATAWHAVLTGTMFTVYYKPRTSPAEFIVPYDQYMESL-KNNYTIGMRFKMRFEG 238

Query: 293 EESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPM 352
           EE+  +R+ GTI GI D D  RW  S WR +KV WDE++   R  RVS W+IEP      
Sbjct: 239 EEAPEQRFTGTIVGIEDSDSKRWPTSKWRCLKVRWDETSNIPRPERVSPWKIEPALA--- 295

Query: 353 YPSLFPLRLKRPWHP 367
            P+L PL + RP  P
Sbjct: 296 PPALNPLPMPRPKRP 310



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 45/110 (40%), Positives = 67/110 (60%), Gaps = 2/110 (1%)

Query: 659 MQDSSELLHNVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEG 717
           +Q S   + +V    Q    R+  KV+K G ++GRS+D+++FS Y+EL  EL Q+F   G
Sbjct: 590 LQTSQPHVKDVQLKPQSGSARSCTKVHKKGIALGRSVDLTKFSDYDELTAELDQLFEFRG 649

Query: 718 KFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           +   P +  W +VF D E D++L+GDDPW+ F S V  I I   E++QKM
Sbjct: 650 ELISPQKD-WLVVFTDNEGDMMLVGDDPWQEFCSMVRKIYIYPKEEIQKM 698


>gi|31747324|gb|AAP57471.1| auxin response factor-like protein [Mangifera indica]
          Length = 326

 Score =  321 bits (822), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 157/294 (53%), Positives = 214/294 (72%), Gaps = 3/294 (1%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           L  ELWHACAGPLV++P  G RV YFPQGH EQV A+TN+  D  +P Y +L  +++C++
Sbjct: 34  LYKELWHACAGPLVTVPRQGERVYYFPQGHIEQVEASTNQFADQQMPIY-DLRSKILCRV 92

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTH 127
            NV + A  +TDEV+AQ+TL P   +++          +  +   + FCKTLTASDTSTH
Sbjct: 93  INVQLKAKPDTDEVFAQITLLPEPNQDENAVEKEPPPPLLPRFHVHSFCKTLTASDTSTH 152

Query: 128 GGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 187
           GGFSV RR AE+  P LD S QPP Q+L+A+DLH  EW+FRHIFRGQP+RHLL +GWSVF
Sbjct: 153 GGFSVLRRHAEECLPVLDMSQQPPTQDLVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 212

Query: 188 VSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAAT 247
           VS+KRLVAGD+ +F+  EK +L +G+RRA+R    +PSSV+SS SMH+G+LA A HA +T
Sbjct: 213 VSSKRLVAGDAFIFLRCEK-ELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVST 271

Query: 248 NSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
            + FTV++ PR SP+EF++P  +Y+++V  +  S+GMRF+M FE EE+  +R +
Sbjct: 272 GTMFTVYYKPRISPAEFIVPFDQYMESV-KSNYSIGMRFKMRFEGEEAPEQRLV 324


>gi|115439091|ref|NP_001043825.1| Os01g0670800 [Oryza sativa Japonica Group]
 gi|122241144|sp|Q0JKI9.1|ARFB_ORYSJ RecName: Full=Auxin response factor 2; AltName: Full=ETTIN-like
           protein 2; AltName: Full=OsETTIN2
 gi|19352035|dbj|BAB85911.1| Arabidopsis ETTIN-like protein 2 [Oryza sativa]
 gi|113533356|dbj|BAF05739.1| Os01g0670800 [Oryza sativa Japonica Group]
          Length = 718

 Score =  320 bits (821), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 166/354 (46%), Positives = 223/354 (62%), Gaps = 22/354 (6%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G   CL  ELWHACAGP+  LP  G+ VVY PQGH E + A       + +P      P 
Sbjct: 33  GGAVCL--ELWHACAGPVAPLPRKGSAVVYLPQGHLEHLGAAPGSGPGAAVP------PH 84

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQK-----------DTFVPIELGIPSKQP 111
           + C++ +V++HAD  TDEVYAQ++L   + E ++           D      +  P++ P
Sbjct: 85  VFCRVVDVSLHADAATDEVYAQVSLVADNEEVERRMREGEDGAACDGEGEDAVKRPARIP 144

Query: 112 TNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIF 171
            + FCKTLTASDTSTHGGFSVPRRAAE  FP LD+SLQ P QEL+A+DLH  EW+FRHI+
Sbjct: 145 -HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSLQRPFQELVAKDLHGTEWRFRHIY 203

Query: 172 RGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSD 231
           RGQP+RHLLTTGWS F++ K+LV+GD+VLF+  E  +L LG+RRA +     P   L + 
Sbjct: 204 RGQPRRHLLTTGWSGFINKKKLVSGDAVLFLRGEDGELRLGVRRAAQLKNASPFPALHNQ 263

Query: 232 SMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFE 291
             +   L+  AHA A  S F +++NPR S SEF+IP  K++++ F    SVGMRF++ +E
Sbjct: 264 ISNTSSLSEVAHAVAVKSIFHIYYNPRLSQSEFIIPYWKFMRS-FSQPFSVGMRFKLRYE 322

Query: 292 TEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 345
           +E++S RR  G I G  + DP+ W  S W+ + V WD+     R   VS WEIE
Sbjct: 323 SEDASERRRTGIIIGSREADPM-WHGSKWKCLVVKWDDDVECRRPNGVSPWEIE 375


>gi|413946509|gb|AFW79158.1| hypothetical protein ZEAMMB73_920641 [Zea mays]
          Length = 736

 Score =  320 bits (819), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 165/351 (47%), Positives = 221/351 (62%), Gaps = 18/351 (5%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
           CL  ELWHACAGP+  LP  G+ VVY PQGH E +         +       LPP + C+
Sbjct: 50  CL--ELWHACAGPVAPLPRKGSVVVYLPQGHIEHLGDAAAAGGGAP--PPVALPPHVFCR 105

Query: 67  LHNVTMHADVETDEVYAQMTL--------QPLSPEEQKDTFVPIELGIPSKQP----TNY 114
           + +VT+HAD  TDEVYAQ+ L        + L    +  +    + G   KQ      + 
Sbjct: 106 VVDVTLHADASTDEVYAQLALVAENEDVARRLRGRSEDGSAEDGDEGETVKQRFSRMPHM 165

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           FCKTLTASDTSTHGGFSVPRRAAE  FP LD+S Q P+QEL+A+DLH  EW+FRHI+RGQ
Sbjct: 166 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWRFRHIYRGQ 225

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMH 234
           P+RHLLTTGWS FV+ K+LV+GD+VLF+  +  +L LG+RRA +         L +  ++
Sbjct: 226 PRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDNGELRLGVRRAAQLKNGSAFPALYNQCLN 285

Query: 235 IGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEE 294
           +G L   AHA AT S F +++NPR S SEF+IP +K++K+ F    S G RF++ +E+++
Sbjct: 286 LGSLPNVAHAVATKSVFHIYYNPRLSQSEFIIPFSKFIKS-FSQPFSAGSRFKVKYESDD 344

Query: 295 SSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 345
           +S RR  G I GI D DP+ W  S W+ + V WD+     +  R+S WEIE
Sbjct: 345 ASERRCTGIIAGIGDADPM-WRGSKWKCLMVRWDDDVDFRQPNRISPWEIE 394


>gi|226491161|ref|NP_001142391.1| uncharacterized protein LOC100274564 [Zea mays]
 gi|223975541|gb|ACN31958.1| unknown [Zea mays]
          Length = 766

 Score =  320 bits (819), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 157/317 (49%), Positives = 220/317 (69%), Gaps = 7/317 (2%)

Query: 58  NLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPS---KQPTNY 114
           +LP +++C++ NV + A+ + DEVYAQ+TL P S  E+  +   +    P+   +   + 
Sbjct: 5   DLPWKILCEVMNVELKAEPDNDEVYAQLTLLPESKPEENGSSEEMPASPPAALARPRVHS 64

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           FCKTLTASDTSTHGGFSV RR A++  P LD + QPP QEL+A+DLH VEW+FRHIFRGQ
Sbjct: 65  FCKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIFRGQ 124

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMH 234
           P+RHLL +GWSVFVSAKRLVAGD+ +F+  +  +L +G+RRA+R    +PSSV+SS SMH
Sbjct: 125 PRRHLLQSGWSVFVSAKRLVAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSHSMH 184

Query: 235 IGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEE 294
           +G+LA A HA  T + FTV++ PR SP+EFV+P  +Y++++      +GMRF+M FE EE
Sbjct: 185 LGVLATAWHAVNTGTMFTVYYKPRTSPAEFVVPCDRYMESL-KRNYPIGMRFKMRFEGEE 243

Query: 295 SSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYP 354
           +  +R+ GTI G  D D   W+ S WR +KV WDE+++  R  RVS W+IEP  +    P
Sbjct: 244 APEQRFTGTIVGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVS---PP 300

Query: 355 SLFPLRLKRPWHPSTSS 371
            + PL + RP  P +++
Sbjct: 301 PINPLPVHRPKRPRSNA 317



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 41/104 (39%), Positives = 64/104 (61%), Gaps = 2/104 (1%)

Query: 678 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           TR+  KV+K G ++GRS+D+++F+ Y EL  EL +MF   G+ +   +  W +V+ D E 
Sbjct: 632 TRSCKKVHKQGMALGRSVDLTKFNGYTELVAELDEMFDFNGELKGCSKE-WMVVYTDYEG 690

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSG 780
           D++L+GDDPW  F S V  I + + E+VQ+M    + S    SG
Sbjct: 691 DMMLVGDDPWNEFCSMVHKIFVYTREEVQRMNPGALNSRPEDSG 734


>gi|295844322|gb|ADG43158.1| auxin response factor 24 [Zea mays]
          Length = 736

 Score =  320 bits (819), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 165/351 (47%), Positives = 221/351 (62%), Gaps = 18/351 (5%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
           CL  ELWHACAGP+  LP  G+ VVY PQGH E +         +       LPP + C+
Sbjct: 50  CL--ELWHACAGPVAPLPRKGSVVVYLPQGHIEHLGDAAAAGGGAP--PPVALPPHVFCR 105

Query: 67  LHNVTMHADVETDEVYAQMTL--------QPLSPEEQKDTFVPIELGIPSKQP----TNY 114
           + +VT+HAD  TDEVYAQ+ L        + L    +  +    + G   KQ      + 
Sbjct: 106 VVDVTLHADASTDEVYAQLALVAENEDVARRLRGRSEDGSAEDGDEGETVKQRFSRMPHM 165

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           FCKTLTASDTSTHGGFSVPRRAAE  FP LD+S Q P+QEL+A+DLH  EW+FRHI+RGQ
Sbjct: 166 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWRFRHIYRGQ 225

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMH 234
           P+RHLLTTGWS FV+ K+LV+GD+VLF+  +  +L LG+RRA +         L +  ++
Sbjct: 226 PRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDNGELRLGVRRAAQLKNGSAFPALYNQCLN 285

Query: 235 IGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEE 294
           +G L   AHA AT S F +++NPR S SEF+IP +K++K+ F    S G RF++ +E+++
Sbjct: 286 LGSLPNVAHAVATKSVFHIYYNPRLSQSEFIIPFSKFIKS-FSQPFSAGSRFKVKYESDD 344

Query: 295 SSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 345
           +S RR  G I GI D DP+ W  S W+ + V WD+     +  R+S WEIE
Sbjct: 345 ASERRCTGIIAGIGDADPM-WRGSKWKCLMVRWDDDVDFRQPNRISPWEIE 394


>gi|218197268|gb|EEC79695.1| hypothetical protein OsI_20981 [Oryza sativa Indica Group]
          Length = 712

 Score =  318 bits (814), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 165/345 (47%), Positives = 217/345 (62%), Gaps = 16/345 (4%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
           CL  ELWHACAGP+  LP  G  VVY PQGH E +         +           + C+
Sbjct: 36  CL--ELWHACAGPVAPLPRKGGVVVYLPQGHLEHLGDAPAAAAAAAAVPP-----HVFCR 88

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP------SKQPTNYFCKTLT 120
           + +VT+ AD  TDEVYAQ++L P   E  +                 ++ P + FCKTLT
Sbjct: 89  VVDVTLLADAATDEVYAQLSLVPEKEEVARRADDGEGEDGDGMKQRFARMP-HMFCKTLT 147

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
           ASDTSTHGGFSVPRRAAE  FP LD+S Q P+QEL+A+DLH  EW+FRHI+RGQP+RHLL
Sbjct: 148 ASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWRFRHIYRGQPRRHLL 207

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 240
           TTGWS FV+ K+LV+GD+VLF+  +  +L LG+RRA +         L +   ++G LA 
Sbjct: 208 TTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGVRRAAQLKNGSAFPALYNQCSNLGTLAN 267

Query: 241 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 300
            AHA AT S F +++NPR S SEF++P  K++K++     SVG+RF+M +E+E++S RRY
Sbjct: 268 VAHAVATESVFNIYYNPRLSQSEFIVPYWKFMKSLSQP-FSVGLRFKMRYESEDASERRY 326

Query: 301 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 345
            G ITG  D DP+ W  S W+ + V WD+     R  RVS WEIE
Sbjct: 327 TGIITGSGDTDPM-WHGSKWKCLLVRWDDDAEFRRPNRVSPWEIE 370


>gi|50511471|gb|AAT77393.1| putative ETTIN protein [Oryza sativa Japonica Group]
          Length = 719

 Score =  318 bits (814), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 164/345 (47%), Positives = 217/345 (62%), Gaps = 16/345 (4%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
           CL  ELWHACAGP+  LP  G  VVY PQGH E +         +           + C+
Sbjct: 36  CL--ELWHACAGPVAPLPRKGGVVVYLPQGHLEHLGDAPAAAAAAAAVPP-----HVFCR 88

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP------SKQPTNYFCKTLT 120
           + +VT+ AD  TDEVYAQ++L P   E  +                 ++ P + FCKTLT
Sbjct: 89  VVDVTLLADAATDEVYAQLSLVPEKEEVARRADDGEGEDGDGMKQRFARMP-HMFCKTLT 147

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
           ASDTSTHGGFSVPRRAAE  FP LD+S Q P+QEL+A+DLH  EW+FRHI+RGQP+RHLL
Sbjct: 148 ASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHSTEWRFRHIYRGQPRRHLL 207

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 240
           TTGWS FV+ K+LV+GD+VLF+  +  +L LG+RRA +         L +   ++G LA 
Sbjct: 208 TTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGVRRAAQLKNGSAFPALYNQCSNLGTLAN 267

Query: 241 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 300
            AHA AT S F +++NPR S SEF++P  K++K++     SVG+RF+M +E+E+++ RRY
Sbjct: 268 VAHAVATESVFNIYYNPRLSQSEFIVPYWKFMKSLSQP-FSVGLRFKMRYESEDATERRY 326

Query: 301 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 345
            G ITG  D DP+ W  S W+ + V WD+     R  RVS WEIE
Sbjct: 327 TGIITGSGDTDPM-WHGSKWKCLLVRWDDDAEFRRPNRVSPWEIE 370


>gi|297724319|ref|NP_001174523.1| Os05g0563400 [Oryza sativa Japonica Group]
 gi|75160561|sp|Q8S985.1|ARFO_ORYSJ RecName: Full=Auxin response factor 15; AltName: Full=ETTIN-like
           protein 1; AltName: Full=OsETTIN1
 gi|19352033|dbj|BAB85910.1| Arabidopsis ETTIN-like protein 1 [Oryza sativa]
 gi|222632562|gb|EEE64694.1| hypothetical protein OsJ_19549 [Oryza sativa Japonica Group]
 gi|255676573|dbj|BAH93251.1| Os05g0563400 [Oryza sativa Japonica Group]
          Length = 712

 Score =  317 bits (812), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 164/345 (47%), Positives = 217/345 (62%), Gaps = 16/345 (4%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
           CL  ELWHACAGP+  LP  G  VVY PQGH E +         +           + C+
Sbjct: 36  CL--ELWHACAGPVAPLPRKGGVVVYLPQGHLEHLGDAPAAAAAAAAVPP-----HVFCR 88

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP------SKQPTNYFCKTLT 120
           + +VT+ AD  TDEVYAQ++L P   E  +                 ++ P + FCKTLT
Sbjct: 89  VVDVTLLADAATDEVYAQLSLVPEKEEVARRADDGEGEDGDGMKQRFARMP-HMFCKTLT 147

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
           ASDTSTHGGFSVPRRAAE  FP LD+S Q P+QEL+A+DLH  EW+FRHI+RGQP+RHLL
Sbjct: 148 ASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHSTEWRFRHIYRGQPRRHLL 207

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 240
           TTGWS FV+ K+LV+GD+VLF+  +  +L LG+RRA +         L +   ++G LA 
Sbjct: 208 TTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGVRRAAQLKNGSAFPALYNQCSNLGTLAN 267

Query: 241 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 300
            AHA AT S F +++NPR S SEF++P  K++K++     SVG+RF+M +E+E+++ RRY
Sbjct: 268 VAHAVATESVFNIYYNPRLSQSEFIVPYWKFMKSLSQP-FSVGLRFKMRYESEDATERRY 326

Query: 301 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 345
            G ITG  D DP+ W  S W+ + V WD+     R  RVS WEIE
Sbjct: 327 TGIITGSGDTDPM-WHGSKWKCLLVRWDDDAEFRRPNRVSPWEIE 370


>gi|218188818|gb|EEC71245.1| hypothetical protein OsI_03213 [Oryza sativa Indica Group]
          Length = 714

 Score =  317 bits (811), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 167/349 (47%), Positives = 224/349 (64%), Gaps = 17/349 (4%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G   CL  ELWHACAGP+  LP  G+ VVY PQGH E + A       + +P +      
Sbjct: 33  GGAVCL--ELWHACAGPVAPLPRKGSAVVYLPQGHLEHLGAAPGPAAVAAVPPH------ 84

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPE------EQKDTFVPIELGIPSKQPTNYFC 116
           + C++ +V++HAD  TDEVYAQ++L   + E      E +D      +  P++ P + FC
Sbjct: 85  VFCRVVDVSLHADAATDEVYAQVSLVADNEEVERRMREGEDGEGEDAVKRPARIP-HMFC 143

Query: 117 KTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPK 176
           KTLTASDTSTHGGFSVPRRAAE  FP LD+SLQ P+QEL+A+DLH  EW+FRHI+RGQP+
Sbjct: 144 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYSLQRPSQELVAKDLHGTEWRFRHIYRGQPR 203

Query: 177 RHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIG 236
           RHLLTTGWS F++ K+LV+GD+VLF+  E  +L LG+RRA +   V P   L +      
Sbjct: 204 RHLLTTGWSGFINKKKLVSGDAVLFLRGEDGELRLGVRRAAQLKNVSPFPALHNQISSTS 263

Query: 237 LLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS 296
            L+  AHA A  S F +++NPR S SEF+IP  K++++ F    SVGMRF++ +E+E++S
Sbjct: 264 SLSEVAHAVAVKSIFHIYYNPRLSQSEFIIPYWKFMRS-FSQPFSVGMRFKLRYESEDAS 322

Query: 297 VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 345
            RR  G I G  + DP+ W  S W+ + V WD+     R   VS WEIE
Sbjct: 323 ERRRTGIIIGSREADPM-WHGSKWKCLVVKWDDDVECRRPNGVSPWEIE 370


>gi|222617072|gb|EEE53204.1| hypothetical protein OsJ_36082 [Oryza sativa Japonica Group]
          Length = 826

 Score =  316 bits (810), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 171/356 (48%), Positives = 225/356 (63%), Gaps = 34/356 (9%)

Query: 40  QVAATTNKEVDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEE----- 94
           QV A+TN+  +       NLP ++ C++ NV + A+ +TDEVYAQ+TL P   ++     
Sbjct: 27  QVEASTNQVAEQQGAPLYNLPWKIPCKVMNVELKAEPDTDEVYAQLTLLPEKQQDGNGSG 86

Query: 95  ----QKDTFVPIELGIPS---KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSL--- 144
                KD     E+  P+   +   + FCKTLTASDTSTHGGFSV RR A++  P L   
Sbjct: 87  NGNVSKDKVEEEEVVPPAATERPRVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLYSF 146

Query: 145 ----------------DFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFV 188
                           D S  PP QEL+A+DLH VEW+FRHIFRGQP+RHLL +GWSVFV
Sbjct: 147 FDRLIVAMPLTSLLDQDMSQHPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSGWSVFV 206

Query: 189 SAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAATN 248
           SAKRLVAGD+ +F+  E  +L +G+RRA+R    +PSSV+SS SMH+G+LA A HA  T 
Sbjct: 207 SAKRLVAGDAFIFLRGENGELRVGVRRAMRQQANIPSSVISSHSMHLGVLATAWHAVNTG 266

Query: 249 SCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGIS 308
           + FTV++ PR SPSEFV+P   Y K       S+GMRF+M FE EE++ +R+ GTI G+ 
Sbjct: 267 TMFTVYYKPRTSPSEFVVPRDLY-KESLKRNHSIGMRFKMTFEGEEAAEQRFTGTIVGVG 325

Query: 309 DLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSLFPLRLKR 363
           D DP  W++S WRS+KV WDE+ +  R  RVS W+IEP  +  P+ P   P R KR
Sbjct: 326 DSDPSGWADSKWRSLKVRWDEAASVPRPDRVSPWQIEPANSPSPVNPLPAP-RTKR 380



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 99/200 (49%), Gaps = 17/200 (8%)

Query: 613 VVFGVHIDSSG----LLLPTTVS----------SFTTSVDPGVSSMPLGDSGFHNSMYGC 658
           ++FG+ +DS      L+ P +V+                DP  +  PL D   H+S    
Sbjct: 619 MLFGISLDSPAKPELLISPPSVAFDGKLQQDALEEDECSDPSKTVKPL-DGAQHDSAREK 677

Query: 659 MQDSSELLHNVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEG 717
            Q   +   N+    Q   +R+  KV+K G ++GRS+D+++F+ Y+EL  EL QMF   G
Sbjct: 678 HQSCPDGTKNIQSKQQNGSSRSCKKVHKQGIALGRSIDLTKFTCYDELIAELDQMFDFNG 737

Query: 718 KFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSP 777
           +     ++ W +V+ D E D++L+GDDPW  F + V  I I + E+VQKM    + S S 
Sbjct: 738 ELNSSSKN-WMVVYTDNEGDMMLVGDDPWNEFCNMVHKIFIYTREEVQKMNPGALNSRSE 796

Query: 778 SSGQRANSRGNCGRDPVGSL 797
            S   +  RG  G    G L
Sbjct: 797 DSRSTSVERGLVGEGLQGGL 816


>gi|357127755|ref|XP_003565543.1| PREDICTED: auxin response factor 1-like [Brachypodium distachyon]
          Length = 701

 Score =  316 bits (809), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 162/344 (47%), Positives = 224/344 (65%), Gaps = 2/344 (0%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G +  L SELW ACAGPLV LP  G RV YF QGH EQV   ++++V +       +P +
Sbjct: 6   GRDAELFSELWRACAGPLVELPQPGQRVFYFLQGHLEQVQQPSDQKVLADQIKMFQVPYK 65

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           ++C++ NV + A+VET+EVYAQ+TL P   +E   +     L    +   + F K LT S
Sbjct: 66  ILCRVVNVELKAEVETEEVYAQITLLPEQDQEYLPSSPDPPLPEVRRPVVHSFSKILTPS 125

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSV RR A +  P LD S+  P QELI +D+   EW+F+HI+RGQP+RHLLTT
Sbjct: 126 DTSTHGGFSVLRRHANECLPPLDMSMPTPTQELICKDILGSEWRFKHIYRGQPRRHLLTT 185

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GWS FV++K+LV GD+ +++  E+ +  +G+R  ++  T MPSSV+SS SMH+G+LA+A+
Sbjct: 186 GWSTFVTSKKLVYGDAFVYLRTEEGEQRVGVRHHVQKRTAMPSSVMSSQSMHLGVLASAS 245

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMG 302
           HA  T S F V++ PR S S++++ + KY       R +VG+RF+M FE EE  V+++ G
Sbjct: 246 HALQTKSIFLVYYRPRVSQSQYIVNVNKYF-LTSKLRYTVGVRFKMSFEGEEVPVKKFSG 304

Query: 303 TITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEP 346
           TI G   L P +WS S W+S KV WD+        RVS WEIEP
Sbjct: 305 TIVGDGALSP-QWSCSEWKSKKVQWDDPANCNGPERVSPWEIEP 347



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 79/163 (48%), Gaps = 20/163 (12%)

Query: 614 VFGVHIDSSGLLLPTTVSSFTTSVDPGVSSM------PLGDSGFHNSMYGCMQDSSELLH 667
           +FGV+     L+ PT+ ++   +   G          P  +SG  +++    +D   +  
Sbjct: 528 LFGVN-----LMKPTSGTATADNAGAGAGETSARVAGPCEESGQVSALSRVTKDHKVVNE 582

Query: 668 NVGQI--DQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLR 724
           +  +I  +Q    R  VKV   G +VGR++D++    Y +L  EL QMF I+      ++
Sbjct: 583 SPREIQSNQSCIARNRVKVQMHGNAVGRAVDLANLDGYEQLIRELEQMFDIKD-----IK 637

Query: 725 SGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
             +++ F D + D + +GDDPW  F   V  I ++ P + +KM
Sbjct: 638 QNFKVAFADNDGDTMKVGDDPWMEFCRMVKKI-VIYPLEEEKM 679


>gi|218186846|gb|EEC69273.1| hypothetical protein OsI_38317 [Oryza sativa Indica Group]
          Length = 840

 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 170/348 (48%), Positives = 222/348 (63%), Gaps = 27/348 (7%)

Query: 41  VAATTNKEVDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLS--PEEQKDT 98
           V A+TN+  +       NLP ++ C++ NV + A+ +TDEVYAQ+TL P        KD 
Sbjct: 49  VEASTNQVAEQQGAPLYNLPWKIPCKVMNVELKAEPDTDEVYAQLTLLPEKWYGNVSKDK 108

Query: 99  FVPIELGIPS---KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSL----------- 144
               E+  P+   +   + FCKTLTASDTSTHGGFSV RR A++  P L           
Sbjct: 109 VEEEEVVPPAATERPRVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLYSFFDRLIVAM 168

Query: 145 --------DFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAG 196
                   D S  PP QEL+A+DLH VEW+FRHIFRGQP+RHLL +GWSVFVSAKRLVAG
Sbjct: 169 PLTSLLDQDMSQHPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSGWSVFVSAKRLVAG 228

Query: 197 DSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFN 256
           D+ +F+  E  +L +G+RRA+R    +PSSV+SS SMH+G+LA A HA  T + FTV++ 
Sbjct: 229 DAFIFLRGENGELRVGVRRAMRQQANIPSSVISSHSMHLGVLATAWHAVNTGTMFTVYYK 288

Query: 257 PRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWS 316
           PR SPSEFV+P   Y K       S+GMRF+M FE EE++ +R+ GTI G+ D DP  W+
Sbjct: 289 PRTSPSEFVVPRDLY-KESLKRNHSIGMRFKMTFEGEEAAEQRFTGTIVGVGDSDPSGWA 347

Query: 317 NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSLFPLRLKR 363
           +S WRS+KV WDE+ +  R  RVS W+IEP  +  P+ P   P R KR
Sbjct: 348 DSKWRSLKVRWDEAASVPRPDRVSPWQIEPANSPSPVNPLPAP-RTKR 394



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 99/200 (49%), Gaps = 17/200 (8%)

Query: 613 VVFGVHIDSSG----LLLPTTVS----------SFTTSVDPGVSSMPLGDSGFHNSMYGC 658
           ++FG+ +DS      L+ P +V+                DP  +  PL D   H+S    
Sbjct: 633 MLFGISLDSPAKPELLISPPSVAFDGKLQQDALEEDECSDPSKTVKPL-DGAQHDSATEK 691

Query: 659 MQDSSELLHNVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEG 717
            Q   +   N+    Q   +R+  KV+K G ++GRS+D+++F+ Y+EL  EL QMF   G
Sbjct: 692 HQSCPDGTKNIQSKQQNGSSRSCKKVHKQGIALGRSIDLTKFTCYDELIAELDQMFDFNG 751

Query: 718 KFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSP 777
           +     ++ W +V+ D E D++L+GDDPW  F + V  I I + E+VQKM    + S S 
Sbjct: 752 ELNSSSKN-WMVVYTDNEGDMMLVGDDPWNEFCNMVHKIFIYTREEVQKMNPGALNSRSE 810

Query: 778 SSGQRANSRGNCGRDPVGSL 797
            S   +  RG  G    G L
Sbjct: 811 DSRSTSVERGLVGEGLRGGL 830


>gi|414877786|tpg|DAA54917.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
          Length = 750

 Score =  313 bits (802), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 155/304 (50%), Positives = 211/304 (69%), Gaps = 11/304 (3%)

Query: 69  NVTMHADVETDEVYAQMTLQPLSPEEQKDTFV--------PIELGIPSKQP-TNYFCKTL 119
           N+ +  + +TDEVYAQ+TL P   +++  +          P  L   ++ P  + FCKTL
Sbjct: 2   NIELKVEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHIHSFCKTL 61

Query: 120 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 179
           TASDTSTHGGFSV RR A++  P LD S  PP QEL+A+DLH  EW+FRHIFRGQP+RHL
Sbjct: 62  TASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRGQPRRHL 121

Query: 180 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLA 239
           L +GWSVFVSAKRLVAGD+ +F+  E  +L +G+RRA+R  T +PSSV+SS +MH+G+LA
Sbjct: 122 LQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHNMHLGVLA 181

Query: 240 AAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRR 299
            A HA  T+S FTV++ PR SP+EFV+   +Y +++     S+GMRF+M FE EE++ +R
Sbjct: 182 TAWHAVNTDSMFTVYYKPRTSPAEFVVSRDRYYESL-KRNYSIGMRFKMRFEGEEAAEQR 240

Query: 300 YMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL 359
           + GTI GI   DP  W++S WRS+KV WDE ++  R  RVS W+IEP +  P + +  P+
Sbjct: 241 FTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEP-SVSPCHVNPLPV 299

Query: 360 RLKR 363
           R KR
Sbjct: 300 RFKR 303



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 55/137 (40%), Positives = 81/137 (59%), Gaps = 2/137 (1%)

Query: 660 QDSSELLHNVGQIDQLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGK 718
           Q S E   N+    Q + TR+  KV+K GS +GRS+D+++F+ Y+EL  EL QMF  +G+
Sbjct: 603 QPSPEATLNIQNKVQSSSTRSCKKVHKQGSALGRSIDLTKFACYDELIAELDQMFDFDGE 662

Query: 719 FEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPS 778
            + P +S W +V+ D E D++L+GDDPW  F   V  I I + E+V++M    + S S  
Sbjct: 663 LKSPCKS-WLVVYTDNEGDIMLVGDDPWNEFCDMVHKIFIYTREEVERMNPGALNSRSED 721

Query: 779 SGQRANSRGNCGRDPVG 795
           S   +  RG   RDP G
Sbjct: 722 SLSDSLGRGVASRDPRG 738


>gi|449462567|ref|XP_004149012.1| PREDICTED: auxin response factor 9-like [Cucumis sativus]
          Length = 641

 Score =  312 bits (799), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 168/338 (49%), Positives = 232/338 (68%), Gaps = 11/338 (3%)

Query: 41  VAATTNKEVDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFV 100
           + A+TN+E++  +P + NLPP+++CQ+ +  + A+ ++DEVYAQ+TL P + +    TF 
Sbjct: 3   LEASTNQELNQKLPLF-NLPPKILCQVVDTRLLAEQDSDEVYAQITLMPEANQALPSTFE 61

Query: 101 P--IELGIPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIAR 158
           P  IE     K   + FCK LTASDTSTHGGFSV R+ A +  P LD + Q P QEL+A+
Sbjct: 62  PPLIEC---RKTKVHSFCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAK 118

Query: 159 DLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR 218
           DLH  EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGDS +F+  E  +L +G+RR  R
Sbjct: 119 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVRRLAR 178

Query: 219 PPTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHT 278
             + MPSSV+SS SMH+G+LA A+HA +T + F V++ PRA  S+F++ L+KY++A+ + 
Sbjct: 179 QQSSMPSSVISSHSMHLGVLATASHAVSTQTRFVVYYKPRA--SQFIVSLSKYMEAM-NN 235

Query: 279 RVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPR 338
           +  VGMRF+M FE EES  RR+ GTI G+ D+ P  W NS WRS++V WDE  + +R  R
Sbjct: 236 KFMVGMRFKMRFEGEESPERRFSGTIVGVDDMSP-HWPNSEWRSLRVQWDELASIQRPDR 294

Query: 339 VSLWEIEPLTT-FPMYPSLFPLRLKRPWHPSTSSFNDN 375
           VS WEIEP     P  P    ++ KRP  P     +DN
Sbjct: 295 VSPWEIEPFVAPTPSIPHSISVKNKRPRPPLEIPDSDN 332



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 53/80 (66%), Gaps = 3/80 (3%)

Query: 689 SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEA 748
           +VGR++D++    Y +L +EL +MF I+G+     R+ W++VF D E D++L+GD PW+ 
Sbjct: 541 AVGRAVDLTTLEGYGQLIDELEKMFDIKGELRP--RNKWEIVFTDDEGDMMLMGDYPWQE 598

Query: 749 FVSNVWYIKILSPEDVQKMG 768
           F + V  I I S +DV KMG
Sbjct: 599 FCNMVRRIYIWSSQDV-KMG 617


>gi|242058293|ref|XP_002458292.1| hypothetical protein SORBIDRAFT_03g030740 [Sorghum bicolor]
 gi|241930267|gb|EES03412.1| hypothetical protein SORBIDRAFT_03g030740 [Sorghum bicolor]
          Length = 702

 Score =  310 bits (794), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 165/356 (46%), Positives = 220/356 (61%), Gaps = 24/356 (6%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G   CL  ELWHACAGP+  LP  G+ VVY PQGH E +    +    +       +PP 
Sbjct: 30  GGAVCL--ELWHACAGPVAPLPRKGSAVVYLPQGHLEHIGGDADAAGAA-------VPPH 80

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQ----------KDTFVPIELGI---PSK 109
           ++C++ +VT+HAD  TDEVYA+++L P   E +          +D     E G    P  
Sbjct: 81  VLCRVVDVTLHADGATDEVYARVSLLPEDEEAERRARARVREDEDADRDGEDGAAMKPLA 140

Query: 110 QPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRH 169
           +  + FCKTLTASDTSTHGGFSVPRRAAE  FP LD+S Q P+QEL+A+DLH  EWKFRH
Sbjct: 141 RTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWKFRH 200

Query: 170 IFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLS 229
           I+RGQP+RHLLTTGWS FV+ K+LV+GD+VLF+  E   L LG+RRA +   V P   L 
Sbjct: 201 IYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGVLRLGVRRAAQLKIVTPIPALH 260

Query: 230 SDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRML 289
           +       L   A A AT + F +++NPR S SEF++P  K+ ++  +  +SVGMR RM 
Sbjct: 261 NQCSSQTTLGNVAQAVATRTVFHIYYNPRLSQSEFIVPYWKFTRS-LNQPISVGMRCRMR 319

Query: 290 FETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 345
           +E++++S RR  G I G  + +P+ W  S W+ + V WD+        RVS WEIE
Sbjct: 320 YESDDASERRCTGIIIGSREAEPI-WYGSKWKCLVVRWDDGIECHWPNRVSPWEIE 374


>gi|297826861|ref|XP_002881313.1| auxin response transcription factor 3 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297327152|gb|EFH57572.1| auxin response transcription factor 3 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 588

 Score =  310 bits (794), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 170/350 (48%), Positives = 221/350 (63%), Gaps = 39/350 (11%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
           CL  ELWHACAGPL+SLP  G+ V+YFPQGH EQ         D     Y  LPP + C+
Sbjct: 50  CL--ELWHACAGPLISLPKRGSLVLYFPQGHLEQAP-------DFSAAIY-GLPPHVFCR 99

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPE---EQKDTFVPIELG------IPSKQPTNYFCK 117
           + +V +HA+  TDEVYAQ++L P S +   + ++  + ++ G      +      + FCK
Sbjct: 100 ILDVKLHAETTTDEVYAQVSLLPESEDIERKVREGIIDVDGGEEDYEVLKRSNTPHMFCK 159

Query: 118 TLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKR 177
           TLTASDTSTHGGFSVPRRAAE  FP LD+S   P+QEL+ARDLH +EW+FRHI+RGQP+R
Sbjct: 160 TLTASDTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRHIYRGQPRR 219

Query: 178 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR-PPTVMPSSVLSSDSMHIG 236
           HLLTTGWS FV+ K+LV+GD+VLF+  +  +L LG+RRA +   T+MP            
Sbjct: 220 HLLTTGWSAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGTLMP------------ 267

Query: 237 LLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS 296
                 +     S FT   +  AS S F+IP  K++K V +    +GMRF+   E+E++S
Sbjct: 268 ------YRPIVFSAFTTTNHNWASWSNFIIPAPKFLKIVDYP-FCIGMRFKARVESEDAS 320

Query: 297 VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEP 346
            RR  G ITGISDLDP+RW  S WR + V WD+  A   Q RVS WEIEP
Sbjct: 321 ERRSPGIITGISDLDPIRWPGSKWRCLLVRWDDIEANGHQQRVSPWEIEP 370


>gi|414881064|tpg|DAA58195.1| TPA: hypothetical protein ZEAMMB73_535248 [Zea mays]
          Length = 698

 Score =  310 bits (793), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 164/357 (45%), Positives = 221/357 (61%), Gaps = 31/357 (8%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
           CL  ELWHACAGP+  LP  G+ VVY PQGH E +     +   +       +PP ++C+
Sbjct: 32  CL--ELWHACAGPVPPLPRKGSAVVYLPQGHLEHIGGDAARGAAAS-----AVPPHVLCR 84

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELG--------------IPSKQPT 112
           + +VT+HAD  TDEVYA+++L P   + +K       +                P  +  
Sbjct: 85  VVDVTLHADGATDEVYARVSLLPEDEDAEKRAQAQARVREDEDRRDGEDGGAMRPLARTP 144

Query: 113 NYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFR 172
           + FCKTLTASDTSTHGGFSVPRRAAE  FP LD+S Q P+QEL+A+DLH  EWKFRHI+R
Sbjct: 145 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWKFRHIYR 204

Query: 173 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA----IRPPTVMPSSVL 228
           GQP+RHLLTTGWS FV+ K+L++GD+VLF+  E   L LG+RRA    I  P   P +  
Sbjct: 205 GQPRRHLLTTGWSAFVNRKKLISGDAVLFLRGEDGVLRLGVRRAAQLKIVTPIPAPHNQC 264

Query: 229 SSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM 288
           SS+S     L   A A AT + F +++NPR + SEF++P  K+ ++ F+  +SVGMR RM
Sbjct: 265 SSNSN----LGNVAQAVATKTVFHIYYNPRLTQSEFIVPYWKFTRS-FNQPISVGMRCRM 319

Query: 289 LFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 345
            +E++++S RR  G I G  + DP+ W  S W+ + V WD+        RVS WEIE
Sbjct: 320 RYESDDASERRCTGIIIGSREADPI-WYGSKWKCLVVRWDDGIECRWPNRVSPWEIE 375


>gi|293334419|ref|NP_001170123.1| uncharacterized protein LOC100384045 [Zea mays]
 gi|224033653|gb|ACN35902.1| unknown [Zea mays]
 gi|295844298|gb|ADG43146.1| auxin response factor 12 [Zea mays]
 gi|407232694|gb|AFT82689.1| ARF12 ARF type transcription factor, partial [Zea mays subsp. mays]
 gi|414881063|tpg|DAA58194.1| TPA: auxin response factor 12 [Zea mays]
          Length = 708

 Score =  309 bits (792), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 164/357 (45%), Positives = 221/357 (61%), Gaps = 31/357 (8%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
           CL  ELWHACAGP+  LP  G+ VVY PQGH E +     +   +       +PP ++C+
Sbjct: 32  CL--ELWHACAGPVPPLPRKGSAVVYLPQGHLEHIGGDAARGAAAS-----AVPPHVLCR 84

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELG--------------IPSKQPT 112
           + +VT+HAD  TDEVYA+++L P   + +K       +                P  +  
Sbjct: 85  VVDVTLHADGATDEVYARVSLLPEDEDAEKRAQAQARVREDEDRRDGEDGGAMRPLARTP 144

Query: 113 NYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFR 172
           + FCKTLTASDTSTHGGFSVPRRAAE  FP LD+S Q P+QEL+A+DLH  EWKFRHI+R
Sbjct: 145 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWKFRHIYR 204

Query: 173 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA----IRPPTVMPSSVL 228
           GQP+RHLLTTGWS FV+ K+L++GD+VLF+  E   L LG+RRA    I  P   P +  
Sbjct: 205 GQPRRHLLTTGWSAFVNRKKLISGDAVLFLRGEDGVLRLGVRRAAQLKIVTPIPAPHNQC 264

Query: 229 SSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM 288
           SS+S     L   A A AT + F +++NPR + SEF++P  K+ ++ F+  +SVGMR RM
Sbjct: 265 SSNSN----LGNVAQAVATKTVFHIYYNPRLTQSEFIVPYWKFTRS-FNQPISVGMRCRM 319

Query: 289 LFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 345
            +E++++S RR  G I G  + DP+ W  S W+ + V WD+        RVS WEIE
Sbjct: 320 RYESDDASERRCTGIIIGSREADPI-WYGSKWKCLVVRWDDGIECRWPNRVSPWEIE 375


>gi|218189070|gb|EEC71497.1| hypothetical protein OsI_03771 [Oryza sativa Indica Group]
          Length = 674

 Score =  308 bits (788), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 157/344 (45%), Positives = 217/344 (63%), Gaps = 15/344 (4%)

Query: 11  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 70
           +LWHACAGP+VSLP  G+ VVY PQGH     A      +  +     LPP + C++ +V
Sbjct: 25  DLWHACAGPVVSLPRRGSAVVYLPQGHLSAAGAGGRIRGEVAVA----LPPHVACRVVDV 80

Query: 71  TMHADVETDEVYAQMTLQPLSPEEQKD---------TFVPIELGIPSKQPTNYFCKTLTA 121
            + AD  TDEVYA++ L+      +++           +         +  + FCKTLTA
Sbjct: 81  ELCADAATDEVYARLALRAEGEVFERNLHGGGIEREDDMEDGDEERKSRMLHMFCKTLTA 140

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAE  FP LD     P+QEL+A+DLH  +W+FRHI+RGQP+RHLLT
Sbjct: 141 SDTSTHGGFSVPRRAAEDCFPPLDHKQLRPSQELVAKDLHGAKWRFRHIYRGQPRRHLLT 200

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWS FV+ K+LV+GD+VLF+  +  +L LG+RRA +          SS+S  +  L+A 
Sbjct: 201 TGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRATQLKNEAIFKAFSSESSKMRTLSAV 260

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           A +    S F + +NPRA+ SE+V+P  K+VK+  H  V +GMRF+  +E+E+ + RR  
Sbjct: 261 ADSLKHGSVFHICYNPRATASEYVVPYWKFVKSFNHP-VCIGMRFKFHYESEDVNERR-S 318

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 345
           G I G+S++DP+RW  S WRS+ V W+++T    Q RVS WEIE
Sbjct: 319 GMIAGVSEVDPIRWPGSKWRSLLVRWEDATDCNSQNRVSPWEIE 362


>gi|115439989|ref|NP_001044274.1| Os01g0753500 [Oryza sativa Japonica Group]
 gi|75106370|sp|Q5JMM1.1|ARFC_ORYSJ RecName: Full=Auxin response factor 3
 gi|57899614|dbj|BAD87193.1| putative ETTIN protein [Oryza sativa Japonica Group]
 gi|57900329|dbj|BAD87282.1| putative ETTIN protein [Oryza sativa Japonica Group]
 gi|113533805|dbj|BAF06188.1| Os01g0753500 [Oryza sativa Japonica Group]
 gi|215701503|dbj|BAG92927.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 731

 Score =  306 bits (783), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 158/344 (45%), Positives = 217/344 (63%), Gaps = 15/344 (4%)

Query: 11  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 70
           +LWHACAGP+VSLP  G+ VVY PQGH     A      +  +     LPP + C++ +V
Sbjct: 82  DLWHACAGPVVSLPRRGSAVVYLPQGHLSAAGAGGGIRGEVAVA----LPPHVACRVVDV 137

Query: 71  TMHADVETDEVYAQMTLQPLSPEEQKD---------TFVPIELGIPSKQPTNYFCKTLTA 121
            + AD  TDEVYA++ L+      +++           +         +  + FCKTLTA
Sbjct: 138 ELCADAATDEVYARLALRAEGEVFERNLHGGGIEREDDMEDGDEERKSRMLHMFCKTLTA 197

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAE  FP LD     P+QEL+A+DLH  +W+FRHI+RGQP+RHLLT
Sbjct: 198 SDTSTHGGFSVPRRAAEDCFPPLDHKQLRPSQELVAKDLHGAKWRFRHIYRGQPRRHLLT 257

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWS FV+ K+LV+GD+VLF+  +  +L LG+RRA +          SS+S  +  L+A 
Sbjct: 258 TGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRATQLKNEAIFKAFSSESSKMRTLSAV 317

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           A +    S F + +NPRA+ SE+V+P  K+VK+  H  V +GMRF+  FE+E+ + RR  
Sbjct: 318 ADSLKHGSVFHICYNPRATASEYVVPYWKFVKSFNHP-VCIGMRFKFHFESEDVNERR-S 375

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 345
           G I G+S++DP+RW  S WRS+ V W+++T    Q RVS WEIE
Sbjct: 376 GMIAGVSEVDPIRWPGSKWRSLLVRWEDATDCNSQNRVSPWEIE 419


>gi|379323188|gb|AFD01293.1| auxin response factor 2-1 [Brassica rapa subsp. pekinensis]
          Length = 798

 Score =  305 bits (782), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 163/370 (44%), Positives = 218/370 (58%), Gaps = 60/370 (16%)

Query: 1   MIGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLP 60
           ++ +   +  ELWHACAGPLV++P    RV YFPQGH EQV A+TN+  +  +P Y +LP
Sbjct: 34  VVDEEAAIYRELWHACAGPLVTVPRRDDRVFYFPQGHIEQVEASTNQAAEQQMPLY-DLP 92

Query: 61  PQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLT 120
            +L+C++ NV + A+V+TDEVYAQ+TL P   +++           P +   + FCKTLT
Sbjct: 93  SKLLCRVINVDLKAEVDTDEVYAQITLLPEPNQDENAVEKEAPPPPPPRFQVHSFCKTLT 152

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
           ASDTSTHGGFSV RR A++  P LD S QPP QEL+A+DLH  EW+FRHIFRGQP+RHLL
Sbjct: 153 ASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHSNEWRFRHIFRGQPRRHLL 212

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 240
            +GWSVFVS+KR                                            L+A 
Sbjct: 213 QSGWSVFVSSKR--------------------------------------------LVAG 228

Query: 241 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 300
            A           F   R SPSEF++P  +Y+++V     S+GMRF+M FE EE+  +R+
Sbjct: 229 DA-----------FIFLRTSPSEFIVPFDQYMESV-KNNYSIGMRFKMRFEGEEAPEQRF 276

Query: 301 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLR 360
            GTI GI D DP RW+ S WRS+KV WDE+++  R  RVS W+IEP       P+L P+ 
Sbjct: 277 TGTIVGIEDSDPTRWAKSKWRSLKVRWDETSSIPRPERVSPWKIEPALA---PPALSPVP 333

Query: 361 LKRPWHPSTS 370
           + RP  P ++
Sbjct: 334 MTRPKRPRSN 343



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 38/90 (42%), Positives = 58/90 (64%), Gaps = 2/90 (2%)

Query: 679 RTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 737
           R+  KV+K G ++GRS+D+S+F +Y EL  EL  +F   G+   P +  W +V+ D END
Sbjct: 651 RSCTKVHKQGIALGRSVDLSKFQNYEELIAELDMLFEFNGELMAP-KKDWLIVYTDDEND 709

Query: 738 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           ++L+GDDPW+ F   V  I I + E+V+ M
Sbjct: 710 MMLVGDDPWQEFCCMVRKIFIYTKEEVRNM 739


>gi|147769056|emb|CAN70219.1| hypothetical protein VITISV_000577 [Vitis vinifera]
          Length = 744

 Score =  305 bits (782), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 170/365 (46%), Positives = 219/365 (60%), Gaps = 46/365 (12%)

Query: 11  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 70
           ELWH CAG L SLP  G  VVYFPQGH EQ AA+++      I  + +LPPQ+ C++ NV
Sbjct: 55  ELWHVCAGRLTSLPKKGNVVVYFPQGHLEQ-AASSSPFPPMDISTF-DLPPQIFCRVVNV 112

Query: 71  TMHADVETDEVYAQMTLQPLSPEEQKDTFVPIEL-----------GIPSKQPTNYFCKTL 119
            + A+ E DEVY Q+TL P  PE         EL           G P+K   + FCKTL
Sbjct: 113 QLLANKENDEVYTQVTLLP-QPELAGINLEGKELEGLGVDEEGGGGSPTKSTPHMFCKTL 171

Query: 120 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 179
           TASDTSTHGGFSVPRRAAE  FP LD+  Q P+QEL+A+DLH VEW+FRHI+RGQP+RHL
Sbjct: 172 TASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHL 231

Query: 180 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLA 239
           LTTGWS+FVS K LV+GD+VLF+  E  +L LGIRRA+RP   +P S++ + + +  +L+
Sbjct: 232 LTTGWSIFVSQKNLVSGDAVLFLRGEGGELRLGIRRAVRPRNGLPDSIIGNQNSYPNVLS 291

Query: 240 AAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMR----------FRML 289
            AA+A AT S F                   +   VF+ +  + M            +ML
Sbjct: 292 LAANAVATKSMF-------------------HGLKVFNKQTHLNMLQDGNQVNKFFLKML 332

Query: 290 FETEE-SSVRRYM--GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEP 346
            E     +V  ++  G +TGI DLDP RW NS WR + V WD+    + Q RVS WEI+P
Sbjct: 333 PEIHNLQNVEVFLSSGVVTGIGDLDPYRWPNSKWRCLMVRWDDDIVSDPQERVSPWEIDP 392

Query: 347 LTTFP 351
             + P
Sbjct: 393 SVSLP 397


>gi|357135881|ref|XP_003569536.1| PREDICTED: auxin response factor 2-like [Brachypodium distachyon]
          Length = 697

 Score =  304 bits (779), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 164/352 (46%), Positives = 211/352 (59%), Gaps = 26/352 (7%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
           CL  ELWHACAGP+  LP  G+ VVY PQGH E +    +            +PP + C+
Sbjct: 28  CL--ELWHACAGPVGPLPRKGSAVVYLPQGHLEHIGDAGSAAA--------KVPPHVFCR 77

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIE-----------LGIPSKQPT--N 113
           + +V + AD  TDEVYAQ+TL  +  EE K      E                + P   +
Sbjct: 78  VVDVNLQADAATDEVYAQVTLA-VDNEESKRRVRDGENEEARDGDGEDADAMKRLPRIPH 136

Query: 114 YFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRG 173
            FCKTLTASDTSTHGGFSVPRRAAE  FP LD+SL  P+QEL+A+DLH  EW+FRHI+RG
Sbjct: 137 MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSLPRPSQELVAKDLHGTEWRFRHIYRG 196

Query: 174 QPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSM 233
           QP+RHLLTTGWS FV+ K+LV+GD+VLF+  E  +L LG+RR  +   V P     +   
Sbjct: 197 QPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGELRLGVRRVAQLKNVSPFPAPHNQDP 256

Query: 234 HIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETE 293
               L   AHA A  S F V++NPR   SEF+IP  K++++V     S GMRF+M +E E
Sbjct: 257 GHSSLGNVAHALAVKSTFHVYYNPRLCQSEFIIPYWKFMRSVGQP-FSAGMRFKMRYENE 315

Query: 294 ESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 345
           ++S RR  G I G  + DP  +  S W+ + V WD+   G R  RVS W+IE
Sbjct: 316 DASERRSTGIIIGSRESDPKSY-GSKWKCLVVRWDDDIEGRRPNRVSPWDIE 366


>gi|301793229|emb|CBA12005.1| putative auxin response factor 3/4, partial [Cycas rumphii]
          Length = 811

 Score =  302 bits (774), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 149/226 (65%), Positives = 183/226 (80%), Gaps = 1/226 (0%)

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
           ASDTSTHGGFSVPRRAAE  FP LD++ Q P+QEL+A+DLH VEW+FRHI+RGQP+RHLL
Sbjct: 1   ASDTSTHGGFSVPRRAAEDCFPPLDYNQQRPSQELLAKDLHGVEWRFRHIYRGQPRRHLL 60

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 240
           TTGWSVFV  K LV+GD+VLF+ +E  +L LGIRRA R  +V+PSSV+SS SMH+G+LAA
Sbjct: 61  TTGWSVFVGQKGLVSGDAVLFLRDENGELRLGIRRASRQQSVVPSSVVSSQSMHLGVLAA 120

Query: 241 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 300
           AA+A +T S F +F+NPRASP+EF+IP  KYVK+     +S+GMRF+M FETE+++ RRY
Sbjct: 121 AANAVSTKSMFHIFYNPRASPAEFIIPYQKYVKSCSQP-LSIGMRFKMRFETEDAAERRY 179

Query: 301 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEP 346
            G ITGI D+DP RW  S WRS+ VGWDE  A E+Q RVS WEIEP
Sbjct: 180 TGIITGIGDVDPTRWPGSKWRSLMVGWDEHAANEQQERVSPWEIEP 225



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 39/89 (43%), Positives = 63/89 (70%), Gaps = 2/89 (2%)

Query: 679 RTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 737
           R+  KV+K G +VGR++D+S+   Y+EL  EL ++F +EG   DP + GWQ+V+ D E+D
Sbjct: 670 RSCTKVHKQGNAVGRAVDLSKLDGYDELISELERLFNMEGLLNDPDK-GWQVVYTDSEDD 728

Query: 738 VLLLGDDPWEAFVSNVWYIKILSPEDVQK 766
           ++L+GDDPW+ F + V  I I + E+++K
Sbjct: 729 MMLVGDDPWQEFCNIVCKILIYTHEELKK 757


>gi|357136486|ref|XP_003569835.1| PREDICTED: auxin response factor 3-like [Brachypodium distachyon]
          Length = 657

 Score =  302 bits (773), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 156/348 (44%), Positives = 219/348 (62%), Gaps = 27/348 (7%)

Query: 11  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 70
           ELWHACAGP+V+LP  G++VVY PQ H        +  V         LPP + C++ +V
Sbjct: 27  ELWHACAGPIVALPRRGSKVVYLPQAHLAAAGCGGDVAV--------ALPPHVACRVVDV 78

Query: 71  TMHADVETDEVYAQMTLQPLSP-----------EEQKDTFVPIELGIPSKQPT--NYFCK 117
            + AD  TDEVYA++ L                E + DT    E G   ++      FCK
Sbjct: 79  ELCADPSTDEVYARLALMAEGEVFERNMEGGRNEGEDDT----EDGDGERKSRMLQMFCK 134

Query: 118 TLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKR 177
           TLTASDTSTHGGFSVPRRAAE  F  LD+    P+QEL+A+DLH  +W+FRHI+RGQP+R
Sbjct: 135 TLTASDTSTHGGFSVPRRAAEDCFSPLDYQQIRPSQELVAKDLHGAKWRFRHIYRGQPRR 194

Query: 178 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGL 237
           HLLTTGWS FV+ K+LV+GD+VLF+  +  +L LG+RRAI+          SS+S  +  
Sbjct: 195 HLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELKLGVRRAIQLKNESLFKAFSSNSSKMNA 254

Query: 238 LAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSV 297
           L+A A++    S F + +NPR + SEF++P  K++K++ H    +GMRF++ + +E+ + 
Sbjct: 255 LSAVANSLKHRSVFHICYNPRDAASEFIVPYWKFLKSLNHP-FCIGMRFKIQYGSEDVNE 313

Query: 298 RRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 345
           RR  G ITG++++DP+RW  S+WRS+ V W++ T    Q R+S WEIE
Sbjct: 314 RRS-GMITGVTEVDPIRWPGSNWRSLLVRWEDGTDCNSQNRLSPWEIE 360


>gi|36939187|gb|AAQ86958.1| ETTIN-like auxin response factor [Triticum aestivum]
          Length = 645

 Score =  301 bits (770), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 162/326 (49%), Positives = 210/326 (64%), Gaps = 19/326 (5%)

Query: 30  VVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQP 89
           VVY PQGH + +        D+  P+   +PP + C++ +VT+HAD  TDEVYAQ++L P
Sbjct: 1   VVYLPQGHLDHLG-------DAPAPSPAAVPPHVFCRVVDVTLHADASTDEVYAQLSLLP 53

Query: 90  LSPE------EQKDTFVPIELGIPSKQP----TNYFCKTLTASDTSTHGGFSVPRRAAEK 139
            + E      E  +     E G   KQ      + FCKTLTASDTSTHGGFSVPRRAAE 
Sbjct: 54  ENEEVVRRMREATEDGSGGEDGETVKQRFARMPHMFCKTLTASDTSTHGGFSVPRRAAED 113

Query: 140 VFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSV 199
            FP LD+S Q P QEL+A+DLH  EWKFRHI+RGQP+RHLLTTGWS FV+ K+LV+GD+V
Sbjct: 114 CFPPLDYSQQRPCQELVAKDLHGTEWKFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAV 173

Query: 200 LFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRA 259
           LF+  +  +L LG+RRA++         L S   ++G LA  AHA AT S F +F+NPR 
Sbjct: 174 LFLRGDDGELRLGVRRAVQLKNGSAFPALYSQCSNLGTLANVAHAVATKSMFQIFYNPRL 233

Query: 260 SPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSH 319
           S SEF++P  K+ K+ F    SVG RF+M +E+E+++ RRY G ITG  D DP+ W  S 
Sbjct: 234 SQSEFIVPYWKFTKS-FSQPFSVGSRFKMRYESEDAAERRYTGIITGTGDADPM-WRGSK 291

Query: 320 WRSVKVGWDESTAGERQPRVSLWEIE 345
           W+ + V WD+     R  RVS WEIE
Sbjct: 292 WKCLLVRWDDDGEFRRPNRVSPWEIE 317


>gi|301069326|ref|NP_001130681.2| auxin response factor 23 [Zea mays]
 gi|295844320|gb|ADG43157.1| auxin response factor 23 [Zea mays]
          Length = 680

 Score =  300 bits (769), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 150/344 (43%), Positives = 215/344 (62%), Gaps = 14/344 (4%)

Query: 11  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 70
           ELWHACAG  V+LP  G+ VVY PQ H   +AA          P  P +PP ++C++ +V
Sbjct: 20  ELWHACAGAGVALPRRGSAVVYLPQAH---LAAGGCDGGGGLAPAPPRVPPHVVCRVVDV 76

Query: 71  TMHADVETDEVYAQMTLQPLSPEEQKDT---------FVPIELGIPSKQPTNYFCKTLTA 121
            + AD  TDEVYA++ L  +     ++              +     K  ++ FCKTLTA
Sbjct: 77  ELRADAATDEVYARLALVAMDTMFGRNINDGETEEKNGEEEDGDGEKKHASHMFCKTLTA 136

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAE  FP LD+    P+QELIA+DLH ++W+FRHI+RGQP+RHLLT
Sbjct: 137 SDTSTHGGFSVPRRAAEDCFPPLDYEQLRPSQELIAKDLHGMKWRFRHIYRGQPRRHLLT 196

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWS F++ K+LV+GD+VLF+     +L LG+RRA++         ++     + +L+A 
Sbjct: 197 TGWSSFINKKKLVSGDAVLFLRGNDGELRLGVRRAVQLKNEALLEAVNCTDSKLLMLSAV 256

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           A++    S F + FNPR   SEF++P  K++K++ +   SVG RF++  E E+++ R + 
Sbjct: 257 ANSLDNRSIFHICFNPRVGASEFIVPYCKFLKSLNY-HFSVGTRFKVGCENEDANERSF- 314

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 345
           G I GIS++DP+ W  S W+S+ + WD +T    Q RVS W+IE
Sbjct: 315 GLIIGISEVDPIHWPGSKWKSLLIKWDGATKYSHQNRVSPWDIE 358


>gi|326523321|dbj|BAJ88701.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 697

 Score =  300 bits (768), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 157/347 (45%), Positives = 221/347 (63%), Gaps = 21/347 (6%)

Query: 11  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIP-NYPNLPPQLICQLHN 69
           ELWHACAGP V+LP  G+ VVY PQ H   +AA      D+  P    ++PP + C++  
Sbjct: 21  ELWHACAGPGVALPRRGSAVVYLPQAH---LAAGGG---DAPAPAGRAHVPPHVACRVVG 74

Query: 70  VTMHADVETDEVYAQMTL-----------QPLSPEEQKDTFVPIELGIPSKQPTNYFCKT 118
           V + AD  TDEVYA++ L           +    EE +D     +     + P + FCKT
Sbjct: 75  VELCADAATDEVYARLALVAEAEMFRQSVRERGSEEGEDEMAAGDGENKPRMP-HMFCKT 133

Query: 119 LTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRH 178
           LTASDTSTHGGFSVPRRAAE  F  LD+    P+QEL+A+DLH  +W+FRHI+RGQP+RH
Sbjct: 134 LTASDTSTHGGFSVPRRAAEDCFAHLDYKQVRPSQELVAKDLHGTQWRFRHIYRGQPRRH 193

Query: 179 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLL 238
           LLTTGWS FV+ K+LV+GD+VLF+  +  +L LG+RRA++         ++++   +  L
Sbjct: 194 LLTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAVQLRNEALFEAVNTNDSKLHTL 253

Query: 239 AAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVR 298
           +A A +    S F V F+PR+  SEF++P  ++ K++ HT  S+GMRF++  E+++++  
Sbjct: 254 SAVASSLENRSIFHVCFDPRSGASEFIVPYWRFSKSLNHT-FSIGMRFKVSNESDDAN-E 311

Query: 299 RYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 345
           R  G I+GIS++DP+RW  S WR + V WD+ST    Q RVS WEIE
Sbjct: 312 RSTGLISGISEVDPIRWPASKWRCLMVRWDDSTHCNHQRRVSPWEIE 358


>gi|224030497|gb|ACN34324.1| unknown [Zea mays]
 gi|407232698|gb|AFT82691.1| ARF23 ARF type transcription factor, partial [Zea mays subsp. mays]
 gi|413946059|gb|AFW78708.1| auxin response factor 4 [Zea mays]
          Length = 680

 Score =  299 bits (766), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 150/345 (43%), Positives = 216/345 (62%), Gaps = 14/345 (4%)

Query: 10  SELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHN 69
           +ELWHACAG  V+LP  G+ VVY PQ H   +AA          P  P +PP ++C++ +
Sbjct: 19  AELWHACAGAGVALPRRGSAVVYLPQAH---LAAGGCDGGGVSAPAPPRVPPHVVCRVVD 75

Query: 70  VTMHADVETDEVYAQMTLQPLSPEEQKDT---------FVPIELGIPSKQPTNYFCKTLT 120
           V + AD  TDEVYA++ L  +     ++              +     K  ++ FCKTLT
Sbjct: 76  VELRADAATDEVYARLALVAMDTMFGRNINDGETEEKNGEEEDGDGEKKHASHMFCKTLT 135

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
           ASDTSTHGGFSVPRRAAE  FP LD+    P+QELIA+DLH ++W+FRHI+RGQP+RHLL
Sbjct: 136 ASDTSTHGGFSVPRRAAEDCFPPLDYEQLRPSQELIAKDLHGMKWRFRHIYRGQPRRHLL 195

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 240
           TTGWS F++ K+LV+GD+VLF+     +L LG+RRA++         ++     + +L+A
Sbjct: 196 TTGWSSFINKKKLVSGDAVLFLRGNDGELRLGVRRAVQLKNEALLEAVNCTDSKLLMLSA 255

Query: 241 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 300
            A++    S F + FNPR   SEF++P  K++K++ +   SVG RF++  E E+++ R +
Sbjct: 256 VANSLDNRSIFHICFNPRVGASEFIVPYCKFLKSLNY-HFSVGTRFKVGCENEDANERSF 314

Query: 301 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 345
            G I GIS++DP+ W  S W+S+ + WD +T    Q RVS W+IE
Sbjct: 315 -GLIIGISEVDPIHWPGSKWKSLLIKWDGATKYSHQNRVSPWDIE 358


>gi|357132990|ref|XP_003568111.1| PREDICTED: auxin response factor 14-like [Brachypodium distachyon]
          Length = 676

 Score =  299 bits (766), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 161/344 (46%), Positives = 223/344 (64%), Gaps = 16/344 (4%)

Query: 11  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 70
           ELWHACAGP VSLP  G+ +VY PQGH         +   +     P +PP + C++ +V
Sbjct: 26  ELWHACAGPGVSLPRQGSALVYLPQGHLASGGGGGGEVAGA----APPVPPHVACRVLDV 81

Query: 71  TMHADVETDEVYAQMTLQPLSPEEQKDTF------VPIELGIPSKQPT--NYFCKTLTAS 122
            + AD  TDEVYA++ L  +    +++          +E G   K+P   + FCKTLTAS
Sbjct: 82  ELCADAATDEVYARLALVAVCEMSRQNLGGTAWGEEDMEFGSGEKKPRMPHMFCKTLTAS 141

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSVPRRAAE  FP LD+    P+QELIA+DLH  +W+FRHI+RGQP+RHLLTT
Sbjct: 142 DTSTHGGFSVPRRAAEDCFPPLDYEQVRPSQELIAKDLHGTQWRFRHIYRGQPRRHLLTT 201

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTV-MPSSVLSSDSMHIGLLAAA 241
           GWS FV+ K+LV+GD+VLF+     +L LGIRRA++     +  +V SSDS     L+A 
Sbjct: 202 GWSSFVNKKKLVSGDAVLFLRGCDGELRLGIRRAVQLRNEDLFKAVNSSDSRQR-TLSAV 260

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           A +    S F V F+PR+  SEF++P  K+ K++ H  +S+GMRF++ +E+E+++  R  
Sbjct: 261 ASSFRNRSTFHVCFDPRSGASEFIVPYWKFSKSLNHP-LSIGMRFKLSYESEDAN-ERST 318

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 345
           G I+G+S++DP+RW  S WR + V WD +T    Q R+S WEIE
Sbjct: 319 GMISGVSEVDPIRWPGSKWRCLLVRWDGNTDCNHQHRISPWEIE 362


>gi|218190030|gb|EEC72457.1| hypothetical protein OsI_05804 [Oryza sativa Indica Group]
          Length = 1067

 Score =  299 bits (765), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 145/216 (67%), Positives = 171/216 (79%), Gaps = 10/216 (4%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQV------AATTNKEVDSHIPNYPNLPP 61
           +NSELWHACAGPLVSLP VG+ VVYFPQGHSEQV      AA+  K+VD+H+P+YPNLP 
Sbjct: 41  INSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVYKSNIVAASMQKDVDAHVPSYPNLPS 100

Query: 62  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQP-TNYFCKTLT 120
           +LIC LH V +HAD +TDEVYAQMTLQP++    K+     EL +   +P   +FCKTLT
Sbjct: 101 KLICLLHGVNLHADPDTDEVYAQMTLQPVN-TYGKEALQLSELALKQARPQMEFFCKTLT 159

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
           ASDTSTHGGFSVPRRAAEK+FP LDFS+QPPAQEL ARD+HD  W FRHI+RGQPKRHLL
Sbjct: 160 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDIHDNVWTFRHIYRGQPKRHLL 219

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWN--EKNQLLLGIR 214
           TTGWS+FVS KRL AGDSV+ +    + NQ+ LG+R
Sbjct: 220 TTGWSLFVSGKRLFAGDSVIVVRRHCDSNQISLGMR 255



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 57/93 (61%), Positives = 72/93 (77%)

Query: 679  RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 738
            RTF KVYK G+VGRS+DI R+S Y EL+  L +MFGIEG+ ED  R GW+LV+ D E+D+
Sbjct: 934  RTFTKVYKRGAVGRSIDIGRYSGYEELKHALARMFGIEGQLEDRQRIGWKLVYKDHEDDI 993

Query: 739  LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 771
            LLLGDDPWE FV+ V  I+ILSP++VQ+M   G
Sbjct: 994  LLLGDDPWEEFVNCVRCIRILSPQEVQQMSLDG 1026



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 82/211 (38%), Positives = 107/211 (50%), Gaps = 29/211 (13%)

Query: 279 RVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPR 338
           ++S+GMRFRM+FETEE   RRYMGTITGISDLDP            VGWDES AGER+ R
Sbjct: 249 QISLGMRFRMMFETEELGTRRYMGTITGISDLDP------------VGWDESAAGERRNR 296

Query: 339 VSLWEIEPLTT-FPMYPSLFPLRLKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTT 397
           VS+WEIEP+   F + P  F   +KRP      S  +N  + A  + WL      +    
Sbjct: 297 VSIWEIEPVAAPFFLCPQPF-FGVKRPRQLDDESEMENLFKRA--MPWLGEEVCIKDTQN 353

Query: 398 LNFQS--LGMFPWMQ-QRVEPSFLGNDHNQQ--YQAMLAAGMQ---SGDPVRQQFMQLQQ 449
            N  +  L +  WM   R + S L N   Q    QA+    MQ   + +  RQ ++Q   
Sbjct: 354 QNSTAPGLSLVQWMNMNRQQSSSLANTAAQSEYLQALGNPAMQNLAADELARQLYVQ--- 410

Query: 450 PFQYLQQSGSQ-NPLQLKQQQHLLQQLNSQA 479
               LQQ+  Q N  +L QQ   +  L+  A
Sbjct: 411 -NNLLQQNCIQFNSPKLPQQMQTMNDLSKAA 440


>gi|195615760|gb|ACG29710.1| auxin response factor 4 [Zea mays]
          Length = 680

 Score =  299 bits (765), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 150/345 (43%), Positives = 216/345 (62%), Gaps = 14/345 (4%)

Query: 10  SELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHN 69
           +ELWHACAG  V+LP  G+ VVY PQ H   +AA          P  P +PP ++C++ +
Sbjct: 19  AELWHACAGAGVALPRRGSAVVYLPQAH---LAAGGCDGGGMSAPAPPRVPPHVVCRVVD 75

Query: 70  VTMHADVETDEVYAQMTLQPLSPEEQKDT---------FVPIELGIPSKQPTNYFCKTLT 120
           V + AD  TDEVYA++ L  +     ++              +     K  ++ FCKTLT
Sbjct: 76  VELRADAATDEVYARLALVAMDTMFGRNINDGETEEKNGEEEDGDGEKKHASHMFCKTLT 135

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
           ASDTSTHGGFSVPRRAAE  FP LD+    P+QELIA+DLH ++W+FRHI+RGQP+RHLL
Sbjct: 136 ASDTSTHGGFSVPRRAAEDCFPPLDYEQLRPSQELIAKDLHGMKWRFRHIYRGQPRRHLL 195

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 240
           TTGWS F++ K+LV+GD+VLF+     +L LG+RRA++         ++     + +L+A
Sbjct: 196 TTGWSSFINKKKLVSGDAVLFLRGNDGELRLGVRRAVQLKNEALLEAVNCTDSKLLMLSA 255

Query: 241 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 300
            A++    S F + FNPR   SEF++P  K++K++ +   SVG RF++  E E+++ R +
Sbjct: 256 VANSLDNRSIFHICFNPRVGASEFIVPYCKFLKSLNYP-FSVGTRFKVGCENEDANERSF 314

Query: 301 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 345
            G I GIS++DP+ W  S W+S+ + WD +T    Q RVS W+IE
Sbjct: 315 -GLIIGISEVDPIHWPGSKWKSLLIKWDGATKYSHQNRVSPWDIE 358


>gi|223973083|gb|ACN30729.1| unknown [Zea mays]
          Length = 680

 Score =  298 bits (764), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 150/345 (43%), Positives = 216/345 (62%), Gaps = 14/345 (4%)

Query: 10  SELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHN 69
           +ELWHACAG  V+LP  G+ VVY PQ H   +AA          P  P +PP ++C++ +
Sbjct: 19  AELWHACAGAGVALPRRGSAVVYLPQAH---LAAGGCDGGGMSAPAPPRVPPHVVCRVVD 75

Query: 70  VTMHADVETDEVYAQMTLQPLSPEEQKDT---------FVPIELGIPSKQPTNYFCKTLT 120
           V + AD  TDEVYA++ L  +     ++              +     K  ++ FCKTLT
Sbjct: 76  VELRADAATDEVYARLALVAMDTMFGRNINDGETEEKNGEEEDGDGEKKHASHMFCKTLT 135

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
           ASDTSTHGGFSVPRRAAE  FP LD+    P+QELIA+DLH ++W+FRHI+RGQP+RHLL
Sbjct: 136 ASDTSTHGGFSVPRRAAEDCFPPLDYEQLRPSQELIAKDLHGMKWRFRHIYRGQPRRHLL 195

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 240
           TTGWS F++ K+LV+GD+VLF+     +L LG+RRA++         ++     + +L+A
Sbjct: 196 TTGWSSFINKKKLVSGDAVLFLRGNDGELRLGVRRAVQLKNEALLEAVNCTDSKLLMLSA 255

Query: 241 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 300
            A++    S F + FNPR   SEF++P  K++K++ +   SVG RF++  E E+++ R +
Sbjct: 256 VANSLDNRSIFHICFNPRVGASEFIVPYCKFLKSLNYP-FSVGTRFKVGCENEDANERSF 314

Query: 301 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 345
            G I GIS++DP+ W  S W+S+ + WD +T    Q RVS W+IE
Sbjct: 315 -GLIIGISEVDPIHWPGSKWKSLLIKWDGATKYSHQNRVSPWDIE 358


>gi|224129718|ref|XP_002320654.1| predicted protein [Populus trichocarpa]
 gi|222861427|gb|EEE98969.1| predicted protein [Populus trichocarpa]
          Length = 331

 Score =  296 bits (759), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 146/293 (49%), Positives = 210/293 (71%), Gaps = 3/293 (1%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           L +ELW+ACAGPLV +P VG +V YFPQGH EQVAA  N++  + +P Y +LP +++C++
Sbjct: 1   LYTELWYACAGPLVYVPRVGDKVFYFPQGHLEQVAAFLNEDSKTAMPIY-DLPYKILCKV 59

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIE-LGIPSKQPTNYFCKTLTASDTST 126
            +V + A+ +TDEV+A +TL P++  ++  +    E L +  K     F K LT SDTST
Sbjct: 60  VHVQLKAEAKTDEVFAHITLLPVAEGDELSSNKDGESLLLHRKTRVLSFTKKLTPSDTST 119

Query: 127 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 186
            GGFSVP+R AE+  P LD S QPPAQEL+A+DLH  EW+FRHI+RGQPKRHLLT GWS 
Sbjct: 120 QGGFSVPKRHAEESLPPLDKSQQPPAQELLAKDLHGSEWRFRHIYRGQPKRHLLTGGWST 179

Query: 187 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 246
           F+S+KR+VAGDS +F+  E  +L +G+RRA++    + ++V+++ SM +G+L++A+HA +
Sbjct: 180 FISSKRVVAGDSFIFLRGESGELRVGVRRAMKLENNLSANVVTAHSMQLGILSSASHAIS 239

Query: 247 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRR 299
           T S FT+FF+P  SP+EF+IP  +Y+K+      S+G RF M FE EE + +R
Sbjct: 240 TGSIFTIFFHPWTSPAEFIIPFDQYMKSA-EIEYSIGTRFIMQFEGEECTEQR 291


>gi|326499428|dbj|BAJ86025.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 648

 Score =  295 bits (756), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 151/345 (43%), Positives = 218/345 (63%), Gaps = 21/345 (6%)

Query: 11  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 70
           +LWHACAGP+V+LP  G+ +VY PQ H        +  V         LPP + C++ +V
Sbjct: 23  DLWHACAGPVVALPRRGSALVYLPQAHLAAAGGGGDAPV--------GLPPHVACRVVDV 74

Query: 71  TMHADVETDEVYAQMTLQPLSPE----------EQKDTFVPIELGIPSKQPTNYFCKTLT 120
            + AD  TDEVYA++ L                E +D    ++ G    +  + FCKTLT
Sbjct: 75  ELCADPATDEVYARLALVAEGEVFEKNMGGGRFEGEDDMEDVD-GERKSRMLHMFCKTLT 133

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
           ASDTSTHGGFSVPRRAAE  FP LD+    P+QEL+A+DLH  +W+FRHI+RGQP+RHLL
Sbjct: 134 ASDTSTHGGFSVPRRAAEDCFPPLDYQQIRPSQELVAKDLHGAKWRFRHIYRGQPRRHLL 193

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 240
           TTGWS FV+ K+LV+GD+VLF+  +  +L LG+RRAI+          +S+S  I  L+A
Sbjct: 194 TTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQLKNEALLKAFNSNSSKIHTLSA 253

Query: 241 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 300
             ++    S F + +NPRA+ SEF++P  K++K++ +    +GMRF++ + +E+ + RR 
Sbjct: 254 VVNSLKHRSVFHICYNPRAAASEFIVPYWKFLKSL-NRPFCIGMRFKIQYGSEDVNERR- 311

Query: 301 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 345
            G ITGI+++DP+RW+ S W+S+ V W++      Q R+S WEIE
Sbjct: 312 SGMITGINEVDPIRWTGSKWKSLLVRWEDGIDCNSQNRLSPWEIE 356


>gi|297741605|emb|CBI32737.3| unnamed protein product [Vitis vinifera]
          Length = 580

 Score =  295 bits (754), Expect = 9e-77,   Method: Compositional matrix adjust.
 Identities = 151/347 (43%), Positives = 206/347 (59%), Gaps = 8/347 (2%)

Query: 6   KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 65
           KCLN +LWHACAG +V +P V ++V YFPQGH+E   A+ +        NYP +P  + C
Sbjct: 16  KCLNPQLWHACAGGMVQMPPVNSKVFYFPQGHAEHACASVD------FRNYPRIPAYIPC 69

Query: 66  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTS 125
           ++  +   AD E+DEVYA++TL PL+  E          G  S++    F KTLT SD +
Sbjct: 70  RVSAMKFMADPESDEVYAKITLVPLNGSESDYDDDGYGNGTESQEKPASFAKTLTQSDAN 129

Query: 126 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 185
             GGFSVPR  AE +FP LD++  PP Q ++A+D+H   WKFRHI+RG P+RHLLTTGWS
Sbjct: 130 NGGGFSVPRYCAETIFPRLDYTADPPVQNILAKDVHGETWKFRHIYRGTPRRHLLTTGWS 189

Query: 186 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 245
            FV+ K+L+AGDS++F+  E   L +GIRRA R       S      +    +  A   A
Sbjct: 190 TFVNHKKLIAGDSIVFLRAENGDLCVGIRRAKRGIGCSNGSFFGRVKVTAEAVIEAVRLA 249

Query: 246 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTI 304
                F V + PRAS  EF +  +  VK+    R   GMRF+M FETE+SS +  +MGTI
Sbjct: 250 VNGQPFEVIYYPRASTPEFCVK-SSLVKSASQIRWCSGMRFKMAFETEDSSRISWFMGTI 308

Query: 305 TGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 351
           + +   DPVRW +S WR ++V WDE    +   RVS W +E ++  P
Sbjct: 309 SSVQVADPVRWPDSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMP 355



 Score = 43.5 bits (101), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 6/79 (7%)

Query: 682 VKVY-KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 740
            KV+ +S  VGR+LD+S  +SY+EL  +L +MF IE   +  +R+   +++ D    V  
Sbjct: 494 CKVFMESEDVGRTLDLSLLTSYDELCGKLAKMFTIE---DSEMRN--HVLYRDATGAVKH 548

Query: 741 LGDDPWEAFVSNVWYIKIL 759
           +GD+P+  F      + IL
Sbjct: 549 IGDEPFSDFTKTAKRLTIL 567


>gi|255556996|ref|XP_002519531.1| Auxin response factor, putative [Ricinus communis]
 gi|223541394|gb|EEF42945.1| Auxin response factor, putative [Ricinus communis]
          Length = 702

 Score =  294 bits (752), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 169/411 (41%), Positives = 229/411 (55%), Gaps = 57/411 (13%)

Query: 6   KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 65
           KCL+S+LWHACAG +V +P V T+V YFPQGH+E  + + +        N+P LPP ++C
Sbjct: 18  KCLDSQLWHACAGGMVQMPAVNTKVFYFPQGHAEHASGSVD------FRNFPRLPPYILC 71

Query: 66  QLHNVTMHADVETDEVYAQMTLQPLSPEE---QKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           ++  +   AD ETDEVYA++ L P+  +E   + +    I  G   +     F KTLT S
Sbjct: 72  RVSGIKFMADPETDEVYAKIKLTPICSKENGMEDEEEGVINGGEGQENKPASFAKTLTQS 131

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           D +  GGFSVPR  AE +FP LD+S  PP Q ++A+D+H   WKFRHI+RG P+RHLLTT
Sbjct: 132 DANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRGTPRRHLLTT 191

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR-----PPT---------VMP---- 224
           GWS FV+ K+LVAGDS++F+  E   L +GIRRA R     P +         VMP    
Sbjct: 192 GWSTFVNHKKLVAGDSIVFLRAENGDLCIGIRRAKRGVGGGPESSWNPAGGNCVMPYGGF 251

Query: 225 SSVLSSDSMHI-----------------GLLAA-----AAHAAATNSCFTVFFNPRASPS 262
           +S    D   +                 G + A     AA  AA    F V + PRAS  
Sbjct: 252 NSFFREDGNKLSRSGNGNGPGENALTGKGKVKAESVIEAATLAANGQPFEVVYYPRASTP 311

Query: 263 EFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWR 321
           EF +  +  VKA F  R   GMRF+M FETE+SS +  +MGTI  +   DP+RW +S WR
Sbjct: 312 EFCVKAS-MVKAAFQIRWCSGMRFKMAFETEDSSRISWFMGTIASVQVADPLRWPDSPWR 370

Query: 322 SVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL-----RLKRPWHP 367
            ++V WDE    +   RVS W +E ++  P+   L P      +L+ P HP
Sbjct: 371 LLQVTWDEPDLLQNVKRVSPWLVELVSNMPVI-HLSPFSPPRKKLRMPQHP 420



 Score = 42.7 bits (99), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 6/79 (7%)

Query: 682 VKVY-KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 740
            KV+ +S  VGR+LD+S   SY+EL  +L  MFGIE        +   +++ D    V  
Sbjct: 619 CKVFMESEDVGRTLDLSLLGSYDELYRKLADMFGIENS-----ETLNNVLYRDIAGIVKH 673

Query: 741 LGDDPWEAFVSNVWYIKIL 759
           +GD+P+  F+     + I+
Sbjct: 674 IGDEPFSDFMKTARRLTII 692


>gi|379323196|gb|AFD01297.1| auxin response factor 3-2 [Brassica rapa subsp. pekinensis]
          Length = 552

 Score =  293 bits (751), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 155/351 (44%), Positives = 208/351 (59%), Gaps = 61/351 (17%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
           CL  ELWHACAGPL+SLP  G+ V+YFPQGH EQ A   +  +         LPP + C+
Sbjct: 49  CL--ELWHACAGPLISLPKRGSLVLYFPQGHLEQQAPGFSAAI-------YGLPPHVFCR 99

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQK---DTFVPIELG--------IPSKQPTNYF 115
           + +V +HA+ +TDEVYAQ++L P S + ++   +  + +  G        +      + F
Sbjct: 100 ILDVKLHAETDTDEVYAQVSLLPESEDIERKLREGVIDVVDGGDQEDYEVVKRSNTPHMF 159

Query: 116 CKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQP 175
           CKTLTASDTSTHGGFSVPRRAAE  FP LD+S   P+QEL+ARDLH +EW+FRHI+RGQP
Sbjct: 160 CKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSKPRPSQELLARDLHGLEWRFRHIYRGQP 219

Query: 176 KRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHI 235
           +RHLLTTGWS FV+ K+LV+GD+VLF+  +  +L LG+RRA +       S   + + + 
Sbjct: 220 RRHLLTTGWSGFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQFEGASAFSAQYNQNTNH 279

Query: 236 GLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEES 295
              +  AHA +TNS F +++NP++                                    
Sbjct: 280 NNFSEVAHAISTNSAFNIYYNPKS------------------------------------ 303

Query: 296 SVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEP 346
                +G ITGISDLDP+RW  S WR + V WD++ A   Q RVS WEIEP
Sbjct: 304 -----LGIITGISDLDPIRWPGSKWRCLIVRWDDNEANRHQQRVSPWEIEP 349


>gi|414587105|tpg|DAA37676.1| TPA: hypothetical protein ZEAMMB73_822305 [Zea mays]
          Length = 285

 Score =  293 bits (750), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 141/252 (55%), Positives = 188/252 (74%), Gaps = 3/252 (1%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTN-KEVDSHIPNYPNLPPQLICQ 66
           L  ELWHACAGPLV++P  G RV YFPQGH EQ+ A+ + +++D ++P + +LPP+++C+
Sbjct: 19  LYQELWHACAGPLVTVPRQGERVYYFPQGHMEQLEASAHHQQLDQYLPMF-DLPPKILCR 77

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 126
           + NV + A+ ++DEVYAQ+ LQP   ++ + T +  E     K   + FCKTLTASDTST
Sbjct: 78  VVNVELRAEADSDEVYAQIMLQP-EADQNELTSLDAEPQEREKCTAHSFCKTLTASDTST 136

Query: 127 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 186
           HGGFSV RR AE+  P LD S  PP QEL+A+DLH  EW FRHIFRGQPKRHLLTTGWSV
Sbjct: 137 HGGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRHIFRGQPKRHLLTTGWSV 196

Query: 187 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 246
           FVS+KRLV+GD+ +F+  E  +L +G+RR +R    MPSSV+SS SMH+G+LA A+HA +
Sbjct: 197 FVSSKRLVSGDAFIFMRGENGELRVGVRRLMRQVNSMPSSVISSHSMHLGVLATASHAIS 256

Query: 247 TNSCFTVFFNPR 258
           T + F+VF+ PR
Sbjct: 257 TGTLFSVFYKPR 268


>gi|158564103|sp|Q0DGS1.2|ARFN_ORYSJ RecName: Full=Auxin response factor 14
          Length = 687

 Score =  291 bits (745), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 156/345 (45%), Positives = 215/345 (62%), Gaps = 16/345 (4%)

Query: 11  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 70
           ELWHACAGP V+LP  G+ +VY PQ H     A      +        +PP + C++  V
Sbjct: 23  ELWHACAGPGVALPRRGSALVYLPQAH----LAADGGGGEVPPAGAAAVPPHVACRVVGV 78

Query: 71  TMHADVETDEVYAQMTLQPLSPEEQKD--------TFVPIELGIPSKQPT--NYFCKTLT 120
            + AD  TDEVYA++ L       Q++            +E     K+P   + FCKTLT
Sbjct: 79  ELRADAATDEVYARLALVAEGEMLQRNFREGGGEDGAGEMEGCDAEKKPRMPHMFCKTLT 138

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
           ASDTSTHGGFSVPRRAAE  FP LD+    P+QELIA DLH  +WKFRHI+RGQP+RHLL
Sbjct: 139 ASDTSTHGGFSVPRRAAEDCFPPLDYKTVRPSQELIAVDLHGTQWKFRHIYRGQPRRHLL 198

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 240
           T GWS FV+ K+LV+GD+VLF+  +  QL LG+RRA++         ++S    + +L++
Sbjct: 199 TIGWSSFVNRKKLVSGDAVLFLRGDDGQLRLGVRRAVQLRNEALFEPVNSSDSKLRILSS 258

Query: 241 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 300
            A +    S F + FNPR+  SEF++P  + +K++ H   S+GMRFR+ +E+E+++  R 
Sbjct: 259 VASSLENKSVFHICFNPRSGASEFIVPYWRLLKSLNHP-FSIGMRFRVCYESEDAN-ERS 316

Query: 301 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 345
            G I+GIS++DP+RW  S W+ + V WD+ST    Q RVS WEIE
Sbjct: 317 AGLISGISEVDPIRWPGSRWKCLLVRWDDSTDSSHQNRVSPWEIE 361


>gi|222618063|gb|EEE54195.1| hypothetical protein OsJ_01030 [Oryza sativa Japonica Group]
          Length = 662

 Score =  290 bits (743), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 146/317 (46%), Positives = 212/317 (66%), Gaps = 13/317 (4%)

Query: 59  LPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNY-FCK 117
           +P +++C++ NV + A+ ETDEV+AQ+TLQP  P+++    +P        +P  + FCK
Sbjct: 29  VPYKILCKVVNVELKAETETDEVFAQITLQP-DPDQENLPTLPDPPLPEQPRPVVHSFCK 87

Query: 118 TLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKR 177
            LT SDTSTHGGFSV RR A +  P LD S+  P QELI +DLH  EW+F+HI+RGQP+R
Sbjct: 88  ILTPSDTSTHGGFSVLRRHANECLPPLDMSMATPTQELITKDLHGSEWRFKHIYRGQPRR 147

Query: 178 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGL 237
           HLLTTGWS FV++K+L++GD+ +++ +E  +  +G+RR ++  + MP+SV+SS SMH+G+
Sbjct: 148 HLLTTGWSTFVTSKKLISGDAFVYLRSETGEQRVGVRRLVQKQSTMPASVISSQSMHLGV 207

Query: 238 LAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSV 297
           LA+A+HA  TNS F V++ PR S S++++ + KY+ A      +VGMRF+M FE E+  V
Sbjct: 208 LASASHAIKTNSIFLVYYRPRLSQSQYIVSVNKYL-AASKVGFNVGMRFKMSFEGEDVPV 266

Query: 298 RRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE------PLTTFP 351
           +++ GTI G  DL  ++WS S W+S+KV WDE T      RVS WEIE      P    P
Sbjct: 267 KKFSGTIVGEGDLS-LQWSGSEWKSLKVQWDEVTNVNGPERVSPWEIETCDGTAPAINVP 325

Query: 352 MYPSLFPLRLKRPWHPS 368
           +  +    + KRP  PS
Sbjct: 326 LQSA---TKNKRPREPS 339



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 50/90 (55%), Gaps = 6/90 (6%)

Query: 679 RTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 737
           RT +KV   G +VGR++D++    Y +L  EL +MF I+      L+  W++ F D E D
Sbjct: 558 RTRIKVQMHGNAVGRAVDLANLDGYEQLMNELEEMFNIKD-----LKQKWKVAFTDDEGD 612

Query: 738 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
            + +GDDPW  F   V  I +   ED +K+
Sbjct: 613 TMEVGDDPWLEFCQMVRKIVLYPIEDEKKI 642


>gi|12323856|gb|AAG51897.1|AC023913_5 auxin response factor, putative; 32824-28369 [Arabidopsis thaliana]
          Length = 620

 Score =  289 bits (740), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 152/366 (41%), Positives = 220/366 (60%), Gaps = 17/366 (4%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G    +  +LW  CAGPL  +P +G  V YFPQG+ E V A+T +E++   P   +LP +
Sbjct: 31  GSKSYMYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVQASTREELNELQP-ICDLPSK 89

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQP-----LSPEEQKDTFVPIELGIPSKQPTNYFCK 117
           L C++  + +  +  +DE+YA++TL P     + P + ++ F P+          N F K
Sbjct: 90  LQCRVIAIHLKVENNSDEIYAEITLMPDTTQVVIPTQSENRFRPL---------VNSFTK 140

Query: 118 TLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKR 177
            LTASDTS +GGFSVP++ A +  P LD S   PAQE++A DLHD +W+FRH +RG P+R
Sbjct: 141 VLTASDTSAYGGFSVPKKHAIECLPPLDMSQPLPAQEILAIDLHDNQWRFRHNYRGTPQR 200

Query: 178 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGL 237
           H LTTGW+ F+++K+LV GD ++F+  E  +L +GIRRA      +PSS++S D M  G+
Sbjct: 201 HSLTTGWNEFITSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGV 260

Query: 238 LAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSV 297
           +A+A HA      F V + P    S+F++   K++ AV + + +VG RF M FE ++ S 
Sbjct: 261 IASAKHAFDNQCIFIVVYKPSIRSSQFIVSYDKFLDAV-NNKFNVGSRFTMRFEGDDFSE 319

Query: 298 RRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLF 357
           RRY GTI G+SD  P  W  S WRS++V WDE  +  R  +VS WEIE L      P   
Sbjct: 320 RRYFGTIIGVSDFSP-HWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLVPALNVPRSS 378

Query: 358 PLRLKR 363
            L+ KR
Sbjct: 379 LLKNKR 384



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 58/96 (60%), Gaps = 3/96 (3%)

Query: 671 QIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQL 729
           Q  Q + +RT  KV   G ++GR++D+S  + Y++L  EL ++F I+G+ +   R+ W++
Sbjct: 517 QSKQFSSSRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQLQT--RNQWKI 574

Query: 730 VFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQ 765
            F D +   +L+GDDPW  F   V  I I S E+V+
Sbjct: 575 AFTDSDGYEMLVGDDPWPEFCKMVKKILIYSKEEVK 610


>gi|300373058|gb|ADG43145.1| auxin response factor 11 [Zea mays]
 gi|414880472|tpg|DAA57603.1| TPA: hypothetical protein ZEAMMB73_690278 [Zea mays]
          Length = 688

 Score =  289 bits (740), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 155/344 (45%), Positives = 210/344 (61%), Gaps = 20/344 (5%)

Query: 11  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 70
           ELWHACAGP+V+LP  G+ VVY PQGH    A   N  VD        LPP + C++ +V
Sbjct: 24  ELWHACAGPVVALPRRGSLVVYLPQGHL-AAAGGGNVAVD--------LPPHVACRVADV 74

Query: 71  TMHADVETDEVYAQMTL--------QPLSPEEQKDTFVPIELGIPSK-QPTNYFCKTLTA 121
            + AD  TDEVYA++ L        + L            +  +  K +  + FCKTLTA
Sbjct: 75  ELCADAATDEVYARLALVAEGEAFGRNLRGGGVDGDDDMEDFDVERKSRMLHMFCKTLTA 134

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAE  FP LD++   P+QEL+A+DLH  +WKFRHI+RGQP+RHLLT
Sbjct: 135 SDTSTHGGFSVPRRAAEDCFPPLDYNQLRPSQELVAKDLHGAKWKFRHIYRGQPRRHLLT 194

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWS FV+ K+LV+GD+VLF+  +  +L LG+RRAI+          S DS     L A 
Sbjct: 195 TGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQLKNEALFDDFSCDSTKRHTLLAV 254

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           A +    S F + +NPRA+ SE++IP  K++K++ +    +G R  +    E+ S RR  
Sbjct: 255 ADSLKHKSVFHISYNPRATASEYIIPHHKFLKSL-NLPFCIGARINLQCHNEDVSERRS- 312

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 345
           G +  +S++DP++W  S WRS+ V W++      Q RVS WEIE
Sbjct: 313 GMVVHVSEIDPMKWPGSKWRSLLVRWEDGVECNGQDRVSPWEIE 356


>gi|42562523|ref|NP_174701.2| auxin response factor 21 [Arabidopsis thaliana]
 gi|46576639|sp|Q9C8N9.2|ARFU_ARATH RecName: Full=Putative auxin response factor 21
 gi|332193589|gb|AEE31710.1| auxin response factor 21 [Arabidopsis thaliana]
          Length = 606

 Score =  289 bits (739), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 153/366 (41%), Positives = 222/366 (60%), Gaps = 19/366 (5%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G    +  +LW  CAGPL  +P +G  V YFPQG+ E V A+T +E++   P   +LP +
Sbjct: 19  GSKSYMYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVQASTREELNELQP-ICDLPSK 77

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQP-----LSPEEQKDTFVPIELGIPSKQPTNYFCK 117
           L C++  + +  +  +DE+YA++TL P     + P + ++ F P+          N F K
Sbjct: 78  LQCRVIAIHLKVENNSDEIYAEITLMPDTTQVVIPTQSENRFRPL---------VNSFTK 128

Query: 118 TLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKR 177
            LTASDTS +GGFSVP++ A +  P LD S   PAQE++A DLHD +W+FRH +RG P+R
Sbjct: 129 VLTASDTSAYGGFSVPKKHAIECLPPLDMSQPLPAQEILAIDLHDNQWRFRHNYRGTPQR 188

Query: 178 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGL 237
           H LTTGW+ F+++K+LV GD ++F+  E  +L +GIRRA      +PSS++S D M  G+
Sbjct: 189 HSLTTGWNEFITSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGV 248

Query: 238 LAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSV 297
           +A+A HA      F V + PR+  S+F++   K++ AV + + +VG RF M FE ++ S 
Sbjct: 249 IASAKHAFDNQCIFIVVYKPRS--SQFIVSYDKFLDAV-NNKFNVGSRFTMRFEGDDFSE 305

Query: 298 RRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLF 357
           RRY GTI G+SD  P  W  S WRS++V WDE  +  R  +VS WEIE L      P   
Sbjct: 306 RRYFGTIIGVSDFSP-HWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLVPALNVPRSS 364

Query: 358 PLRLKR 363
            L+ KR
Sbjct: 365 LLKNKR 370



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 58/96 (60%), Gaps = 3/96 (3%)

Query: 671 QIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQL 729
           Q  Q + +RT  KV   G ++GR++D+S  + Y++L  EL ++F I+G+ +   R+ W++
Sbjct: 503 QSKQFSSSRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQLQT--RNQWKI 560

Query: 730 VFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQ 765
            F D +   +L+GDDPW  F   V  I I S E+V+
Sbjct: 561 AFTDSDGYEMLVGDDPWPEFCKMVKKILIYSKEEVK 596


>gi|301793231|emb|CBA12006.1| putative auxin response factor 2/1/9, partial [Cycas rumphii]
          Length = 775

 Score =  289 bits (739), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 145/250 (58%), Positives = 185/250 (74%), Gaps = 1/250 (0%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           FCKTLTASDTSTHGGFSV RR A++  P LD + QPPAQEL+A+DLH V W FRHIFRGQ
Sbjct: 18  FCKTLTASDTSTHGGFSVLRRHADECLPPLDMNQQPPAQELVAKDLHGVGWHFRHIFRGQ 77

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMH 234
           P+RHLLTTGWSVFVS+KRL+AGD+ +F+  +  +L +G+RRA+R    + SSV+SS SMH
Sbjct: 78  PRRHLLTTGWSVFVSSKRLIAGDAFIFLRGKNGELRVGVRRAMRQQNNVSSSVISSHSMH 137

Query: 235 IGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEE 294
           +G++A A+HA +T++ FTV++ PR SPS F+IP  KY++A+ +   SVGMRF+M FE EE
Sbjct: 138 LGVVATASHAVSTHTMFTVYYKPRTSPSGFIIPYEKYMEAM-NNNFSVGMRFKMRFEGEE 196

Query: 295 SSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYP 354
           +  +R++GTI G  D DPVRW  S WRS+KV WDE +   R  RVS WEIE + T     
Sbjct: 197 APEQRFIGTIIGTGDSDPVRWPGSKWRSLKVQWDEISVVARPERVSPWEIELIATAAALS 256

Query: 355 SLFPLRLKRP 364
            L   R KRP
Sbjct: 257 PLPVSRNKRP 266



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 42/98 (42%), Positives = 59/98 (60%), Gaps = 10/98 (10%)

Query: 679 RTFVKVYKSGSV-GRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 737
           R+  KV K GS  GR++D+ +F  Y E   EL QMF IEG+ EDP R GW +V+ D E D
Sbjct: 638 RSHTKVQKQGSAFGRAVDLMKFEGYPEFIHELEQMFNIEGELEDP-RKGWLVVYTDNEGD 696

Query: 738 VLLLGDDPWEAFVSNV--------WYIKILSPEDVQKM 767
           ++L+GD PW+ F+  +          I I + E+V+KM
Sbjct: 697 MMLVGDHPWQEFLHPINREFCRIAHKIYIYTREEVEKM 734


>gi|295844326|gb|ADG43160.1| auxin response factor 26 [Zea mays]
          Length = 686

 Score =  288 bits (737), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 153/344 (44%), Positives = 207/344 (60%), Gaps = 20/344 (5%)

Query: 11  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 70
           ELWHACAGP+V+LP  G+ VVY PQGH                    +LPP ++C++ +V
Sbjct: 24  ELWHACAGPVVALPRRGSLVVYLPQGHLAAAGGGDVAA---------DLPPHVVCRVADV 74

Query: 71  TMHADVETDEVYAQMTL--------QPLSPEEQKDTFVPIELGIPSKQPT-NYFCKTLTA 121
            + AD  TDEV A++ L        + L     +      +     K    + FCKTLTA
Sbjct: 75  ELCADAATDEVCARLALVAEGEAFGRNLGGGGVEGDDGMEDFDAERKSGMLHMFCKTLTA 134

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAE  FP LD++   P+QEL+A+DLH  +WKFRHI+RGQP+RHLLT
Sbjct: 135 SDTSTHGGFSVPRRAAEDCFPPLDYNQLRPSQELVAKDLHGAKWKFRHIYRGQPRRHLLT 194

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWS FV+ K+LV+GD+VLF+  +  +L LG+RRAI+          +SDS     L A 
Sbjct: 195 TGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQLKNEALFEDFNSDSTKRHSLTAV 254

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           A +    S F + +NPRA+ SE++IP  K++K++ H  V +G R       E+ S RR  
Sbjct: 255 ADSLKNRSVFHISYNPRATASEYIIPYAKFLKSLNHP-VCIGARINFQCHNEDVSERRS- 312

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 345
           G +  IS++DP++W  S WRS+ V W++      Q RVS WEIE
Sbjct: 313 GVVVRISEIDPMKWPGSKWRSLLVRWEDGAECNGQDRVSPWEIE 356


>gi|413952425|gb|AFW85074.1| hypothetical protein ZEAMMB73_374158 [Zea mays]
          Length = 683

 Score =  288 bits (737), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 153/344 (44%), Positives = 207/344 (60%), Gaps = 20/344 (5%)

Query: 11  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 70
           ELWHACAGP+V+LP  G+ VVY PQGH                    +LPP ++C++ +V
Sbjct: 24  ELWHACAGPVVALPRRGSLVVYLPQGHLAAAGGGDVAA---------DLPPHVVCRVADV 74

Query: 71  TMHADVETDEVYAQMTL--------QPLSPEEQKDTFVPIELGIPSKQPT-NYFCKTLTA 121
            + AD  TDEV A++ L        + L     +      +     K    + FCKTLTA
Sbjct: 75  ELCADAATDEVCARLALVAEGEAFGRNLGGGGVEGDDGMEDFDAERKSGMLHMFCKTLTA 134

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAE  FP LD++   P+QEL+A+DLH  +WKFRHI+RGQP+RHLLT
Sbjct: 135 SDTSTHGGFSVPRRAAEDCFPPLDYNQLRPSQELVAKDLHGAKWKFRHIYRGQPRRHLLT 194

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWS FV+ K+LV+GD+VLF+  +  +L LG+RRAI+          +SDS     L A 
Sbjct: 195 TGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQLKNEALFEDFNSDSTKRHSLTAV 254

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           A +    S F + +NPRA+ SE++IP  K++K++ H  V +G R       E+ S RR  
Sbjct: 255 ADSLKNRSVFHISYNPRATASEYIIPYAKFLKSLNHP-VCIGARINFQCHNEDVSERRS- 312

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 345
           G +  IS++DP++W  S WRS+ V W++      Q RVS WEIE
Sbjct: 313 GVVVRISEIDPMKWPGSKWRSLLVRWEDGAECNGQDRVSPWEIE 356


>gi|42562516|ref|NP_174691.2| auxin response factor 12 [Arabidopsis thaliana]
 gi|46576671|sp|Q9XID4.2|ARFL_ARATH RecName: Full=Auxin response factor 12
 gi|49616359|gb|AAT67076.1| ARF12 [Arabidopsis thaliana]
 gi|225898000|dbj|BAH30332.1| hypothetical protein [Arabidopsis thaliana]
 gi|332193574|gb|AEE31695.1| auxin response factor 12 [Arabidopsis thaliana]
          Length = 593

 Score =  287 bits (734), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 154/366 (42%), Positives = 220/366 (60%), Gaps = 19/366 (5%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G    +  +LW  CAGPL  +P +G +V YFPQGH E V  +T +E++   P   +LP +
Sbjct: 19  GSKSYVYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVETSTREELNELQP-ICDLPSK 77

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQP-----LSPEEQKDTFVPIELGIPSKQPTNYFCK 117
           L C++  + +  +  +DE YA++TL P     + P + ++ F P+          N F K
Sbjct: 78  LQCRVIAIHLKVENNSDETYAEITLMPDTTQVVIPTQNENQFRPL---------VNSFTK 128

Query: 118 TLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKR 177
            LTASDTS HGGF VP++ A +  PSLD S   PAQEL+A DLH  +W+F H +RG P+R
Sbjct: 129 VLTASDTSAHGGFFVPKKHAIECLPSLDMSQPLPAQELLAIDLHGNQWRFNHNYRGTPQR 188

Query: 178 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGL 237
           HLLTTGW+ F ++K+LVAGD ++F+  E  +L +GIRRA      +PSS++S D M  G+
Sbjct: 189 HLLTTGWNAFTTSKKLVAGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGV 248

Query: 238 LAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSV 297
           +A+A HA      FTV + PR+  S+F++   K++ AV + + +VG RF M  E ++ S 
Sbjct: 249 VASAKHAFDNQCMFTVVYKPRS--SKFIVSYDKFLDAV-NNKFNVGSRFTMRLEGDDFSE 305

Query: 298 RRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLF 357
           RR  GTI G+SD  P  W  S WRS++V WDE T+     +VS W+IE L      P  F
Sbjct: 306 RRCFGTIIGVSDFSP-HWKCSEWRSLEVQWDEFTSFPGPKKVSPWDIEHLMPAINVPRSF 364

Query: 358 PLRLKR 363
            L+ KR
Sbjct: 365 LLKNKR 370



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 84/169 (49%), Gaps = 17/169 (10%)

Query: 592 SYNGKDAAVGTENCNTDS-QNSVVFGVHIDSSGLLLPTTVSSFTTSVDPGVSSMPLGDSG 650
           +YN +      EN  T +  N  +FGV +D+     P  +      +   +S +  G   
Sbjct: 436 NYNNQMVTEMEENITTKTGTNFRLFGVTLDT-----PPVIKDPIEEIGSEISKLTEGKKF 490

Query: 651 FHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREEL 709
               +   ++  +E+     Q  Q + +RT  KV   G ++GR++D+S  + Y++L  EL
Sbjct: 491 ---GLSQTLRSPTEI-----QNKQFSSSRTCTKVQMQGVTIGRAVDLSVLNGYDQLILEL 542

Query: 710 GQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKI 758
            ++F I+G+ +   R+ W++ F D + D +L+GDDPW  F + V  I I
Sbjct: 543 EKLFDIKGQLQT--RNQWEIAFTDSDEDKMLVGDDPWPEFCNMVKKIFI 589


>gi|302772062|ref|XP_002969449.1| hypothetical protein SELMODRAFT_451564 [Selaginella moellendorffii]
 gi|300162925|gb|EFJ29537.1| hypothetical protein SELMODRAFT_451564 [Selaginella moellendorffii]
          Length = 779

 Score =  287 bits (734), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 162/401 (40%), Positives = 228/401 (56%), Gaps = 56/401 (13%)

Query: 5   NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLI 64
            K L+S+LWHACAG +V LP VG +V+YFPQGH EQ AA         IP++P     ++
Sbjct: 19  KKGLDSQLWHACAGGMVQLPPVGAKVIYFPQGHGEQAAA---------IPDFPRSGGTIL 69

Query: 65  CQLHNVTMHADVETDEVYAQMTLQP-LSP---------EEQKDTFVPIELGIPSKQPTNY 114
           C++ +V   AD ETDEVYA+M LQP ++P         ++++    P  +  P+      
Sbjct: 70  CRVISVDFLADAETDEVYAKMKLQPEVAPAPLFGTRMGDDEELVSSPTVVEKPAS----- 124

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F KTLT SD +  GGFSVPR  AE +FP LD+S+ PP Q ++A+D+H   WKFRHI+RG 
Sbjct: 125 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSIDPPVQTVLAKDVHGEIWKFRHIYRGT 184

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSV------- 227
           P+RHLLTTGWS FV+ K+LVAGD+++F+ +   +L +G+RR++R P    S +       
Sbjct: 185 PRRHLLTTGWSTFVNQKKLVAGDAIVFLRSASGELCVGVRRSMRGPGNGDSGISWHSSPG 244

Query: 228 -------LSSDSMHIGLLAAAAHAAATNS--------------CFTVFFNPRASPSEFVI 266
                  LS +       + A + A   S               F V + PRAS +EF +
Sbjct: 245 QSGYSELLSGNGSGTSGASFARNRARVTSKSVLEAASLAAAGQAFEVVYYPRASTAEFCV 304

Query: 267 PLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKV 325
                VKA        GMRF+M FETE+SS +  +MGTI+ +   DP+RW +S WR ++V
Sbjct: 305 -RASVVKASLEHSWYPGMRFKMAFETEDSSRISWFMGTISAVQPADPIRWPSSPWRILQV 363

Query: 326 GWDESTAGERQPRVSLWEIEPLTTFPMY--PSLFPLRLKRP 364
            WDE    +   RVS W++E ++T PM   P   P +  RP
Sbjct: 364 SWDEPDLLQGVNRVSPWQVELVSTLPMQLPPFSLPRKKIRP 404


>gi|297832370|ref|XP_002884067.1| hypothetical protein ARALYDRAFT_319704 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297329907|gb|EFH60326.1| hypothetical protein ARALYDRAFT_319704 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 597

 Score =  286 bits (733), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 152/354 (42%), Positives = 218/354 (61%), Gaps = 23/354 (6%)

Query: 11  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 70
           +LW  CAGPL  +P +G +V YFPQGH E + A T +E++   P + +LP +L C++  +
Sbjct: 28  QLWKLCAGPLCDIPKIGEKVYYFPQGHIELIEAYTREELNKIQPIF-DLPSKLQCRVIAI 86

Query: 71  TMHADVETDEVYAQMTLQP----LSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 126
            +  +  +DE YA++TL P    + P +  + + P+          N F K LTASDTS 
Sbjct: 87  QLKVEKNSDETYAEITLMPDTQVVIPTQNDNHYRPL---------VNSFTKVLTASDTSV 137

Query: 127 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 186
           HGGFSVPR+ A +  P LD S   PAQEL+  DLH  +W+F+H +RG P+RHLLT+GW+ 
Sbjct: 138 HGGFSVPRKLAIECLPPLDMSQPLPAQELLTIDLHGNQWRFKHSYRGTPRRHLLTSGWNA 197

Query: 187 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 246
           F ++K+LVAGD ++F+  E  +L +GIRRA      + SS++S DSM  G++A+A HA  
Sbjct: 198 FTTSKKLVAGDVIVFLRGETGELRVGIRRAGHQQKNIHSSLISIDSMRHGVIASAVHAFN 257

Query: 247 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 306
               F V + PR+  S+F++   K+V AV + + +VG RF M FE E+ S RRY GTI G
Sbjct: 258 NQCMFIVVYKPRS--SQFIVSYNKFVDAV-NNKFNVGSRFTMRFEGEDFSERRYSGTIIG 314

Query: 307 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLR 360
           +++     W  S WRS++V WDE  +  R  +VS W+IE LT     PSL  LR
Sbjct: 315 VNNFSS-HWMESEWRSLEVKWDEFASFPRPDKVSPWDIEHLT-----PSLNVLR 362



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 51/89 (57%), Gaps = 3/89 (3%)

Query: 671 QIDQLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQL 729
           Q  Q + TR+  KV   G  VGR+LD++  + Y+ L  EL ++F + G+ +   R+ W++
Sbjct: 508 QSKQFSSTRSCTKVQMQGVPVGRALDLNVLNGYDHLIIELEKLFDLNGQLQT--RNQWKI 565

Query: 730 VFVDRENDVLLLGDDPWEAFVSNVWYIKI 758
            F D E +  L+GD+PW  F S V  I I
Sbjct: 566 AFKDNEGNEKLVGDNPWPEFCSMVKKIFI 594


>gi|413952426|gb|AFW85075.1| hypothetical protein ZEAMMB73_374158 [Zea mays]
          Length = 393

 Score =  286 bits (732), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 153/344 (44%), Positives = 207/344 (60%), Gaps = 20/344 (5%)

Query: 11  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 70
           ELWHACAGP+V+LP  G+ VVY PQGH                    +LPP ++C++ +V
Sbjct: 24  ELWHACAGPVVALPRRGSLVVYLPQGHLAAAGGGDVAA---------DLPPHVVCRVADV 74

Query: 71  TMHADVETDEVYAQMTL--------QPLSPEEQKDTFVPIELGIPSKQPT-NYFCKTLTA 121
            + AD  TDEV A++ L        + L     +      +     K    + FCKTLTA
Sbjct: 75  ELCADAATDEVCARLALVAEGEAFGRNLGGGGVEGDDGMEDFDAERKSGMLHMFCKTLTA 134

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAE  FP LD++   P+QEL+A+DLH  +WKFRHI+RGQP+RHLLT
Sbjct: 135 SDTSTHGGFSVPRRAAEDCFPPLDYNQLRPSQELVAKDLHGAKWKFRHIYRGQPRRHLLT 194

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWS FV+ K+LV+GD+VLF+  +  +L LG+RRAI+          +SDS     L A 
Sbjct: 195 TGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQLKNEALFEDFNSDSTKRHSLTAV 254

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           A +    S F + +NPRA+ SE++IP  K++K++ H  V +G R       E+ S RR  
Sbjct: 255 ADSLKNRSVFHISYNPRATASEYIIPYAKFLKSLNHP-VCIGARINFQCHNEDVSERRS- 312

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 345
           G +  IS++DP++W  S WRS+ V W++      Q RVS WEIE
Sbjct: 313 GVVVRISEIDPMKWPGSKWRSLLVRWEDGAECNGQDRVSPWEIE 356


>gi|125572056|gb|EAZ13571.1| hypothetical protein OsJ_03487 [Oryza sativa Japonica Group]
          Length = 668

 Score =  286 bits (732), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 153/340 (45%), Positives = 211/340 (62%), Gaps = 13/340 (3%)

Query: 11  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 70
           +LWHACAGP+VSLP  G+ VVY PQGH     A      +  +     LPP + C++ +V
Sbjct: 25  DLWHACAGPVVSLPRRGSAVVYLPQGHLSAAGAGGGIRGEVAVA----LPPHVACRVVDV 80

Query: 71  TMHAD-----VETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTS 125
            +        V    +Y + TL       +++  +         +  + FCKTLTASDTS
Sbjct: 81  ELCVSEPLSLVVGFSLYLRGTLH--GGGIEREDDMEDGDEERKSRMLHMFCKTLTASDTS 138

Query: 126 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 185
           THGGFSVPRRAAE  FP LD     P+QEL+A+DLH  +W+FRHI+RGQP+RHLLTTGWS
Sbjct: 139 THGGFSVPRRAAEDCFPPLDHKQLRPSQELVAKDLHGAKWRFRHIYRGQPRRHLLTTGWS 198

Query: 186 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 245
            FV+ K+LV+GD+VLF+  +  +L LG+RRA +          SS+S  +  L+A A + 
Sbjct: 199 SFVNKKKLVSGDAVLFLRGDDGELRLGVRRATQLKNEAIFKAFSSESSKMRTLSAVADSL 258

Query: 246 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 305
              S F + +NPRA+ SE+V+P  K+VK+  H  V +GMRF+  FE+E+ + RR  G I 
Sbjct: 259 KHGSVFHICYNPRATASEYVVPYWKFVKSFNHP-VCIGMRFKFHFESEDVNERR-SGMIA 316

Query: 306 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 345
           G+S++DP+RW  S WRS+ V W+++T    Q RVS WEIE
Sbjct: 317 GVSEVDPIRWPGSKWRSLLVRWEDATDCNSQNRVSPWEIE 356


>gi|357453951|ref|XP_003597256.1| Auxin response factor [Medicago truncatula]
 gi|355486304|gb|AES67507.1| Auxin response factor [Medicago truncatula]
          Length = 755

 Score =  285 bits (728), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 189/534 (35%), Positives = 276/534 (51%), Gaps = 92/534 (17%)

Query: 6   KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 65
           K L+ +LWHACAG +V +P+V T+V YFPQGH+E   A +N +          +PP ++C
Sbjct: 62  KSLDPQLWHACAGGMVQMPSVNTKVFYFPQGHAEH--AQSNVDFGDSF----RIPPLILC 115

Query: 66  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTS 125
           ++ +V   AD ETDEV++++TL PL   E ++     +    S++P + F KTLT SD +
Sbjct: 116 RVASVKFLADSETDEVFSKITLIPLRNSELENDDSDGDGSENSEKPAS-FAKTLTQSDAN 174

Query: 126 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 185
             GGFSVPR  AE +FP LD+S +PP Q +IA+D+H   WKFRHI+RG P+RHLLTTGWS
Sbjct: 175 NGGGFSVPRYCAETIFPRLDYSAEPPVQTVIAKDVHGEVWKFRHIYRGTPRRHLLTTGWS 234

Query: 186 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPT--VMPSSVLSSDSMHIGL------ 237
            FV+ K+LVAGDS++F+  E  +L +GIRRA R     +   S  SS + + GL      
Sbjct: 235 SFVNQKKLVAGDSIVFLRAESGELFVGIRRAKRGIVNGLETPSGWSSGNGNCGLGPYGGA 294

Query: 238 -----------------------------LAAAAHAAATNSCFTVFFNPRASPSEFVIPL 268
                                        +  A   AA+N  F V + PRAS  EF I  
Sbjct: 295 FTAFLREENKLGGVGGNLGGGRVKVSGESVKEAMRLAASNQTFEVVYYPRASTPEFCIK- 353

Query: 269 TKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVGW 327
           T  VKA    +   GMRF+M FETE+SS +  +MGTI+ +  +DP+RW NS WR ++V W
Sbjct: 354 TSAVKAAMRIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVVDPIRWPNSPWRLLQVTW 413

Query: 328 DESTAGERQPRVSLWEIEPLTT-----------------FPMYPSLFPLRLKR------- 363
           DE        RVS W +E ++                  FP +P  FPL + +       
Sbjct: 414 DEPDLLHNVKRVSPWLVELVSNMSMIHLAPFSPPRKKLRFPQHPD-FPLDVVQFQIPTFS 472

Query: 364 --PWHP-STSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQS----LGMFPWMQQRV-EP 415
             P++P    S +DN +  A+G+   R       L+ L+  +    LG+FP  ++ +   
Sbjct: 473 GNPFNPLCCLSSSDNYNAPAAGIQGARHAQIGISLSDLHLNNNKFQLGVFPNNRETISNV 532

Query: 416 SFLGNDHNQQYQAMLAAGMQSGDP-------------VRQQFMQLQQPFQYLQQ 456
           S +  +H+ + +  ++  +  G+               R QF+   QP    QQ
Sbjct: 533 SNITTNHDNKSKESISCLLTIGNSHKRSLEIKSDNNDNRHQFLLFGQPILTEQQ 586


>gi|302755594|ref|XP_002961221.1| hypothetical protein SELMODRAFT_437622 [Selaginella moellendorffii]
 gi|300172160|gb|EFJ38760.1| hypothetical protein SELMODRAFT_437622 [Selaginella moellendorffii]
          Length = 835

 Score =  284 bits (726), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 162/416 (38%), Positives = 230/416 (55%), Gaps = 71/416 (17%)

Query: 5   NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLI 64
            K L+S+LWHACAG +V LP VG +V+YFPQGH EQ AA         IP++P     ++
Sbjct: 60  KKGLDSQLWHACAGGMVQLPPVGAKVIYFPQGHGEQAAA---------IPDFPRSGGTIL 110

Query: 65  CQLHNVTMHADVETDEVYAQMTLQP-LSP---------EEQKDTFVPIELGIPSKQPTNY 114
           C++ +V   AD ETDEVYA+M LQP ++P         ++++    P  +  P+      
Sbjct: 111 CRVISVDFLADAETDEVYAKMKLQPEVAPAPLFGTRMGDDEELVSSPTVVEKPAS----- 165

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F KTLT SD +  GGFSVPR  AE +FP LD+S+ PP Q ++A+D+H   WKFRHI+RG 
Sbjct: 166 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSIDPPVQTVLAKDVHGEIWKFRHIYRGT 225

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSV------- 227
           P+RHLLTTGWS FV+ K+LVAGD+++F+ +   +L +G+RR++R P    S +       
Sbjct: 226 PRRHLLTTGWSTFVNQKKLVAGDAIVFLRSASGELCVGVRRSMRGPGNGDSGISWHSSPG 285

Query: 228 ------------LSSDSMHIGLLAAAAHAAATNS------------------------CF 251
                       + S+S +  LL+      +  S                         F
Sbjct: 286 QRSLPQNSSRWEIKSESGYSELLSGNGSGTSGASFARNRARVTSKSVLEAASLAAAGQAF 345

Query: 252 TVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDL 310
            V + PRAS +EF +     VKA        GMRF+M FETE+SS +  +MGTI+ +   
Sbjct: 346 EVVYYPRASTAEFCV-RASVVKASLEHSWYPGMRFKMAFETEDSSRISWFMGTISAVQPA 404

Query: 311 DPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMY--PSLFPLRLKRP 364
           DP+RW +S WR ++V WDE    +   RVS W++E ++T PM   P   P +  RP
Sbjct: 405 DPIRWPSSPWRILQVSWDEPDLLQGVNRVSPWQVELVSTLPMQLPPFSLPRKKIRP 460


>gi|356570756|ref|XP_003553551.1| PREDICTED: auxin response factor 18-like [Glycine max]
          Length = 688

 Score =  283 bits (725), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 169/412 (41%), Positives = 226/412 (54%), Gaps = 55/412 (13%)

Query: 6   KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 65
           KCL+S LWHACAG +V +P V  +V YFPQGH+E      +  V      YP +PP + C
Sbjct: 12  KCLDSRLWHACAGGMVQMPVVNAKVFYFPQGHAEHACGPVDFRV------YPKIPPFIQC 65

Query: 66  QLHNVTMHADVETDEVYAQMTLQPLSPEEQ--KDTFVPIELGIPSKQPTNYFCKTLTASD 123
           ++  +   AD ETDEVY ++ L PL+  E   +D  V    G  +K  +  F KTLT SD
Sbjct: 66  KVGAIKYMADPETDEVYVKLRLVPLTRNEGDFEDDAVGGINGSENKDKSPSFAKTLTQSD 125

Query: 124 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 183
            +  GGFSVPR  AE +FP LD+S  PP Q ++A+D+H   WKFRHI+RG P+RHLLTTG
Sbjct: 126 ANNGGGFSVPRYCAETIFPRLDYSADPPVQNILAKDVHGETWKFRHIYRGTPRRHLLTTG 185

Query: 184 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA---------------------IRPPTV 222
           WS FV+ K+LVAGDS++F+  EK+ L +GIRRA                     IRP   
Sbjct: 186 WSSFVNHKKLVAGDSIVFLRAEKDDLRVGIRRAKRGIGIGGGPEAPAGWNSGGGIRP--- 242

Query: 223 MPSSVLS-------SDSMHIGL------------LAAAAHAAATNSCFTVFFNPRASPSE 263
           MP    S       S  +  GL            +  AA  AA    F V + PRAS  E
Sbjct: 243 MPYGGFSAFLREEDSQLLRNGLSPNAKGKVRPEAVIEAATLAANMQPFEVVYYPRASAPE 302

Query: 264 FVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRS 322
           F +     V+A    R   GMRF+M FETE+SS +  +MGTI+ ++  DP RW NS WR 
Sbjct: 303 FCVK-ANLVRAALQVRWCPGMRFKMPFETEDSSRISWFMGTISSVNFADP-RWPNSPWRL 360

Query: 323 VKVGWDESTAGERQPRVSLWEIEPLTTFP-MYPSLFPLRLKRPWHPSTSSFN 373
           ++V WDE    +   RVS W +E ++  P ++ S +  + K+P  P    F+
Sbjct: 361 LQVTWDEPELLQNVKRVSPWLVEIVSNMPTIHLSHYSTQQKKPRFPQHPDFS 412


>gi|225439992|ref|XP_002281486.1| PREDICTED: auxin response factor 18-like [Vitis vinifera]
          Length = 701

 Score =  282 bits (721), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 157/390 (40%), Positives = 214/390 (54%), Gaps = 51/390 (13%)

Query: 6   KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 65
           KCLN +LWHACAG +V +P V ++V YFPQGH+E   A+ +        NYP +P  + C
Sbjct: 16  KCLNPQLWHACAGGMVQMPPVNSKVFYFPQGHAEHACASVD------FRNYPRIPAYIPC 69

Query: 66  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTS 125
           ++  +   AD E+DEVYA++TL PL+  E          G  S++    F KTLT SD +
Sbjct: 70  RVSAMKFMADPESDEVYAKITLVPLNGSESDYDDDGYGNGTESQEKPASFAKTLTQSDAN 129

Query: 126 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 185
             GGFSVPR  AE +FP LD++  PP Q ++A+D+H   WKFRHI+RG P+RHLLTTGWS
Sbjct: 130 NGGGFSVPRYCAETIFPRLDYTADPPVQNILAKDVHGETWKFRHIYRGTPRRHLLTTGWS 189

Query: 186 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR-----PPT-----------VMP----S 225
            FV+ K+L+AGDS++F+  E   L +GIRRA R     P +           VMP    S
Sbjct: 190 TFVNHKKLIAGDSIVFLRAENGDLCVGIRRAKRGIGCGPESSSGWNPAGCNYVMPYGGFS 249

Query: 226 SVLSSDSMHIG-----------------------LLAAAAHAAATNSCFTVFFNPRASPS 262
           + L  D   +                         +  A   A     F V + PRAS  
Sbjct: 250 AFLREDENKLTRNGNGGSSGSNGSFFGRVKVTAEAVIEAVRLAVNGQPFEVIYYPRASTP 309

Query: 263 EFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWR 321
           EF +  +  VK+    R   GMRF+M FETE+SS +  +MGTI+ +   DPVRW +S WR
Sbjct: 310 EFCVK-SSLVKSASQIRWCSGMRFKMAFETEDSSRISWFMGTISSVQVADPVRWPDSPWR 368

Query: 322 SVKVGWDESTAGERQPRVSLWEIEPLTTFP 351
            ++V WDE    +   RVS W +E ++  P
Sbjct: 369 LLQVTWDEPDLLQNVKRVSPWLVELVSNMP 398



 Score = 43.9 bits (102), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 6/79 (7%)

Query: 682 VKVY-KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 740
            KV+ +S  VGR+LD+S  +SY+EL  +L +MF IE   +  +R+   +++ D    V  
Sbjct: 615 CKVFMESEDVGRTLDLSLLTSYDELCGKLAKMFTIE---DSEMRN--HVLYRDATGAVKH 669

Query: 741 LGDDPWEAFVSNVWYIKIL 759
           +GD+P+  F      + IL
Sbjct: 670 IGDEPFSDFTKTAKRLTIL 688


>gi|15219635|ref|NP_174786.1| auxin response factor 14 [Arabidopsis thaliana]
 gi|46576662|sp|Q9LQE8.2|ARFN_ARATH RecName: Full=Putative auxin response factor 14
 gi|332193688|gb|AEE31809.1| auxin response factor 14 [Arabidopsis thaliana]
          Length = 605

 Score =  281 bits (720), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 146/351 (41%), Positives = 213/351 (60%), Gaps = 19/351 (5%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G    +  +LW  CAGPL  +P +G +V YFPQGH E V A+T +E++   P   + P +
Sbjct: 19  GSKSYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQP-ICDFPSK 77

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQP-----LSPEEQKDTFVPIELGIPSKQPTNYFCK 117
           L C++  + +  +  +DE YA++TL P     + P + ++ F P+          N F K
Sbjct: 78  LQCRVIAIQLKVENNSDETYAEITLMPDTTQVVIPTQNQNQFRPL---------VNSFTK 128

Query: 118 TLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKR 177
            LTASDTS HGGFSVP++ A +  P LD S   P QE++A DLH  +W+FRHI+RG  +R
Sbjct: 129 VLTASDTSVHGGFSVPKKHAIECLPPLDMSQPLPTQEILAIDLHGNQWRFRHIYRGTAQR 188

Query: 178 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGL 237
           HLLT GW+ F ++K+LV GD ++F+  E  +L +GIRRA      +PSS++S +SM  G+
Sbjct: 189 HLLTIGWNAFTTSKKLVEGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIVSIESMRHGI 248

Query: 238 LAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSV 297
           +A+A HA      F V + PR+  S+F++   K++  V + + +VG RF M FE ++ S 
Sbjct: 249 IASAKHAFDNQCMFIVVYKPRS--SQFIVSYDKFLDVV-NNKFNVGSRFTMRFEGDDFSE 305

Query: 298 RRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 348
           RR  GTI G+SD  P  W  S WRS++V WDE  +  R  +VS W+IE LT
Sbjct: 306 RRSFGTIIGVSDFSP-HWKCSEWRSLEVQWDEFASFPRPNQVSPWDIEHLT 355



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 61/98 (62%), Gaps = 3/98 (3%)

Query: 671 QIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQL 729
           Q  Q + TRT  KV   G ++GR++D+S  + Y++L  EL ++F ++G+ +   R+ W++
Sbjct: 502 QSKQFSSTRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQ--ARNQWEI 559

Query: 730 VFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
            F + E D +L+G+DPW  F + V  I I S E+V+ +
Sbjct: 560 AFTNNEEDKMLVGEDPWPEFCNMVKKIFIYSKEEVKNL 597


>gi|12322942|gb|AAG51458.1|AC069160_4 hypothetical protein [Arabidopsis thaliana]
          Length = 615

 Score =  281 bits (719), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 150/366 (40%), Positives = 219/366 (59%), Gaps = 19/366 (5%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G    +  +LW  CAGPL  +P +G  V YFPQG+ E V A+T +E++   P   +LP +
Sbjct: 19  GSKSYMYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVDASTREELNELQP-ICDLPSK 77

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQP-----LSPEEQKDTFVPIELGIPSKQPTNYFCK 117
           L C++  + +  +  +DE YA++TL P     + P + ++ F P+          N F K
Sbjct: 78  LQCRVIAIHLKVENNSDETYAEITLMPDTTQVVIPTQSENQFRPL---------VNSFTK 128

Query: 118 TLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKR 177
            LTASDTS +GGF VP++ A +  P LD S   PAQEL+A+DLH  +W+FRH +RG P+R
Sbjct: 129 VLTASDTSAYGGFFVPKKHAIECLPPLDMSQPLPAQELLAKDLHGNQWRFRHSYRGTPQR 188

Query: 178 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGL 237
           H LTTGW+ F ++K+LV GD ++F+  E  +L +GIRRA      +PSS++S D M  G+
Sbjct: 189 HSLTTGWNEFTTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGV 248

Query: 238 LAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSV 297
           +A+A HA      F V + PR+  S+F++   K++ A+ + +  VG RF M FE ++ S 
Sbjct: 249 IASAKHALDNQCIFIVVYKPRS--SQFIVSYDKFLDAM-NNKFIVGSRFTMRFEGDDFSE 305

Query: 298 RRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLF 357
           RRY GTI G++D  P  W  S WRS++V WDE  +  R  +VS WEIE L +    P   
Sbjct: 306 RRYFGTIIGVNDFSP-HWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLMSALNVPRSS 364

Query: 358 PLRLKR 363
            L+ KR
Sbjct: 365 LLKNKR 370



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 57/96 (59%), Gaps = 3/96 (3%)

Query: 671 QIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQL 729
           Q  Q   TRT  KV   G ++GR++D+S  + Y++L  EL ++F ++G+ +   R+ W++
Sbjct: 512 QSKQFGSTRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQT--RNQWKI 569

Query: 730 VFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQ 765
            F D +   +L+GDDPW  F   V  I I S E+V+
Sbjct: 570 AFTDSDGYEMLVGDDPWPEFCKMVKKILIYSKEEVK 605


>gi|449532717|ref|XP_004173327.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 9-like,
           partial [Cucumis sativus]
          Length = 590

 Score =  279 bits (713), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 133/240 (55%), Positives = 172/240 (71%), Gaps = 4/240 (1%)

Query: 108 SKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKF 167
           ++Q   +FCK LTASDTSTHGGFSV R+ A +  P LD S   P QEL A+DLH  EWKF
Sbjct: 15  TRQTVRFFCKILTASDTSTHGGFSVLRKHAAECLPPLDMSQSTPTQELAAKDLHGYEWKF 74

Query: 168 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSV 227
           +HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+  +  +L +G+RR  R  ++MPSSV
Sbjct: 75  KHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGDNGELRVGVRRQARQQSLMPSSV 134

Query: 228 LSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFR 287
           +SS SMH+G+LA A+HA  T + F V++ PR   S+F+I L KY++ V      VGMRF+
Sbjct: 135 ISSHSMHLGVLATASHAVRTQTYFVVYYKPRT--SQFIISLNKYLETV-KNGYEVGMRFK 191

Query: 288 MLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 347
           M FE EES  RR+ GTI G+ D+ P +WS+S WRS+K+ WDE    +R  RVS WEIEP 
Sbjct: 192 MRFEGEESPERRFTGTIVGVGDMSP-QWSDSKWRSLKIQWDEPATIQRPERVSPWEIEPF 250



 Score = 79.0 bits (193), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 91/186 (48%), Gaps = 24/186 (12%)

Query: 597 DAAVGTENCNTDSQN--SVVFGVHIDSSGLLL-------PTTVSSFTTSVDPGVSSMPLG 647
           D ++G      D +N  S+V  +   SS L++       P   +  T  VD G  S P  
Sbjct: 397 DISLGCRIFGIDLKNNCSIVPTLERRSSCLMMVTDGAKEPVVTAVVTPQVDAGNLSQPSK 456

Query: 648 DSGFHNSMYGCMQDSSELLHNVGQIDQLT--PTRTFVKVYKSG-SVGRSLDISRFSSYNE 704
           +           Q S+ELL    Q   ++   +RT  KV   G +VGR++D++    Y +
Sbjct: 457 E----------QQLSTELLTKGTQTKHISNLSSRTRTKVQMQGVAVGRAVDLTTLEGYED 506

Query: 705 LREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDV 764
           L +EL  +F I+G+      + W +VF D END++L+GDDPW  F   V  I I S E+V
Sbjct: 507 LIDELENVFEIKGELRGI--NKWSIVFTDDENDMMLVGDDPWPEFCKMVKRIFICSSEEV 564

Query: 765 QKMGEQ 770
           +KM  +
Sbjct: 565 KKMSRE 570


>gi|379323224|gb|AFD01311.1| auxin response factor 16-1 [Brassica rapa subsp. pekinensis]
          Length = 647

 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 164/399 (41%), Positives = 226/399 (56%), Gaps = 42/399 (10%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G  K L+ +LWHACAG +V +P + ++V YFPQGH+E         VD    N P +PP 
Sbjct: 11  GSEKGLDPQLWHACAGGMVRMPPMNSKVFYFPQGHAENAY----DHVD--FKNLP-IPPM 63

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPL--SPEEQKDTFVPIELGIPSKQPTNYFCKTLT 120
           ++C++  +   AD E+DEV+A++ L PL  +  E +D      LG  + + T  F KTLT
Sbjct: 64  VLCRVLAIKYMADPESDEVFAKLKLIPLKDNDHEYRDGEESNGLGSNNSEKTPSFAKTLT 123

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
            SD +  GGFSVPR  AE +FP LD++ +PP Q ++A+D+H   WKFRHI+RG P+RHLL
Sbjct: 124 QSDANNGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGEVWKFRHIYRGTPRRHLL 183

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR---------------PPTVMPS 225
           TTGWS FV+ K+LVAGDS++F+  E   L +GIRRA R               P     S
Sbjct: 184 TTGWSNFVNQKKLVAGDSIVFMRAENGDLCVGIRRAKRGGIGNNGLEYSAGWNPIGGSYS 243

Query: 226 SVLSSDSM--------HIGLLAA-----AAHAAATNSCFTVFFNPRASPSEFVIPLTKYV 272
           S+L  D            G + A     AA  A +   F V + PRAS SEF +      
Sbjct: 244 SLLRDDERRSSSSLADRKGKVTAESVVEAAKLAVSGRGFEVVYYPRASSSEFCVKALD-A 302

Query: 273 KAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDEST 331
           +A        GMRF+M FETE+SS +  +MGT++ +S  DPVRW NS WR ++V WDE  
Sbjct: 303 RAAMRIPWCSGMRFKMAFETEDSSRISWFMGTVSAVSVSDPVRWPNSPWRLLQVAWDEPD 362

Query: 332 AGERQPRVSLWEIEPLTTF-PMYPSLFPLR--LKRPWHP 367
             +   RV+ W +E ++   P+ PS  P R  ++ P HP
Sbjct: 363 LLQYVKRVNPWLVELVSNVHPIIPSFSPPRKKMRLPQHP 401



 Score = 41.6 bits (96), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 79/180 (43%), Gaps = 33/180 (18%)

Query: 600 VGTENCN-TDSQNS--VVFGVHIDSSGLLLPTT-VSSFTTSVDPGVSSMPLGDSGFHNSM 655
           +GT  CN T+S+ S  V+FG       L+LP     S  T +  G S+         N +
Sbjct: 493 MGTSPCNDTESKKSHIVLFG------KLILPEEQKGSEKTQLSSGGSN--------QNCV 538

Query: 656 YGCMQDSSELLHNVGQIDQLTPTRTFVKVY-KSGSVGRSLDISRFSSYNELREELGQMFG 714
            G   +      N    D L       KV+ +S  VGR+LD+S   SY EL  +L  MFG
Sbjct: 539 AGSSSEEGSPCSNKAH-DGLGLETGHCKVFMESDDVGRTLDLSVLGSYEELGMKLSDMFG 597

Query: 715 IEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVES 774
           I+    + L S   +++ D    V   G++P+  F+     + ILS        EQG ES
Sbjct: 598 IQK--SEMLSS---VLYRDASGAVKYPGNEPFSEFLKTARRLTILS--------EQGSES 644


>gi|8778254|gb|AAF79263.1|AC023279_12 F12K21.26 [Arabidopsis thaliana]
          Length = 620

 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 147/351 (41%), Positives = 213/351 (60%), Gaps = 27/351 (7%)

Query: 11  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 70
           +LW  CAGPL  +P +G  V YFPQG+ E   A+T +E++   P   +LP +L C++  +
Sbjct: 4   QLWKLCAGPLCDIPKLGENVYYFPQGNIE--LASTREELNELQP-ICDLPSKLQCRVIAI 60

Query: 71  TMHADVETDEVYAQMTLQP-----LSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTS 125
            +  +  +DE+YA++TL P     + P + ++ F P+          N F K LTASDTS
Sbjct: 61  HLKVENNSDEIYAEITLMPDTTQVVIPTQSENRFRPL---------VNSFTKVLTASDTS 111

Query: 126 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 185
            +GGFSVP++ A +  P LD S   PAQE++A DLHD +W+FRH +RG P+RH LTTGW+
Sbjct: 112 AYGGFSVPKKHAIECLPPLDMSQPLPAQEILAIDLHDNQWRFRHNYRGTPQRHSLTTGWN 171

Query: 186 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 245
            F+++K+LV GD ++F+  E  +L +GIRRA      +PSS++S D M  G++A+A HA 
Sbjct: 172 EFITSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKHAF 231

Query: 246 ATNSCFTVFFNPR--------ASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSV 297
                F V + PR           S+F++   K++ AV + + +VG RF M FE ++ S 
Sbjct: 232 DNQCIFIVVYKPRFIFCVFISIRSSQFIVSYDKFLDAV-NNKFNVGSRFTMRFEGDDFSE 290

Query: 298 RRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 348
           RRY GTI G+SD  P  W  S WRS++V WDE  +  R  +VS WEIE L 
Sbjct: 291 RRYFGTIIGVSDFSP-HWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLV 340



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 49/77 (63%), Gaps = 2/77 (2%)

Query: 689 SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEA 748
           ++GR++D+S  + Y++L  EL ++F I+G+ +   R+ W++ F D +   +L+GDDPW  
Sbjct: 536 TIGRAVDLSVLNGYDQLILELEKLFDIKGQLQT--RNQWKIAFTDSDGYEMLVGDDPWPE 593

Query: 749 FVSNVWYIKILSPEDVQ 765
           F   V  I I S E+V+
Sbjct: 594 FCKMVKKILIYSKEEVK 610


>gi|297851862|ref|XP_002893812.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297339654|gb|EFH70071.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 625

 Score =  277 bits (709), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 144/338 (42%), Positives = 209/338 (61%), Gaps = 11/338 (3%)

Query: 11  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 70
           +LW  CAGPL  LP  G  + YFPQGH E + A+T  E+D   P++ +LP +L C + ++
Sbjct: 27  QLWKICAGPLCDLPKPGETIYYFPQGHIELIEASTKDELDQIRPHF-DLPSKLRCCVDDI 85

Query: 71  TMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNY-FCKTLTASDTSTHGG 129
            +  D  TD+VYA++ L P    +  D   PI   + +++P  Y F K LT+SD +THGG
Sbjct: 86  QLKIDQNTDDVYAEIYLMP----DTTDVITPI-TTMDNQRPMVYSFSKILTSSDANTHGG 140

Query: 130 FSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVS 189
            S+ +R A +  P LD S + P Q L+A+DLH  EW F+H FRG P+RHL T+GWS+F +
Sbjct: 141 LSILKRHATECLPPLDMSQRTPMQHLVAKDLHGREWTFKHSFRGTPRRHLFTSGWSLFAT 200

Query: 190 AKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAATNS 249
            KRL+ GD+ +F+  E  +L +GIRRA       PS V+S+  M  G++A+  +A  +  
Sbjct: 201 TKRLIVGDAFVFLRGENGELGVGIRRARHQLGHKPSLVISTQCMKDGVIASVVNAFKSKC 260

Query: 250 CFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGISD 309
            F V + P  S S+FV+   K+V A+ + +  VG RFRM FE ++ S +RY GTI G++D
Sbjct: 261 KFIVVYKP--SSSQFVVNYDKFVDAM-NNKFIVGSRFRMRFEGQDFSEKRYSGTIIGVND 317

Query: 310 LDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 347
           + P  W +S WRS++V WDE +   R  +VS WEIE L
Sbjct: 318 MSP-HWKDSEWRSLQVQWDELSPFPRPDKVSPWEIEHL 354



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 60/98 (61%), Gaps = 3/98 (3%)

Query: 671 QIDQLTPTRTFVKVYKSGSV-GRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQL 729
           Q  +   TR  +KV   G V GR++D++ F  YN+L ++L ++F ++ +     R+ W++
Sbjct: 504 QSSKFNSTRRRIKVQMQGVVIGRAVDLTVFHGYNQLIQKLEELFDLKDELRS--RNQWEI 561

Query: 730 VFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           VF++ E +V+ LGDDPW  F +    I I S E+++KM
Sbjct: 562 VFINNEGNVMPLGDDPWPEFCNMAKKIFIGSKEEIEKM 599


>gi|46576661|sp|Q9LQE3.2|ARFO_ARATH RecName: Full=Putative auxin response factor 15
          Length = 593

 Score =  277 bits (708), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 146/342 (42%), Positives = 211/342 (61%), Gaps = 19/342 (5%)

Query: 11  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 70
           +LW  CAGPL  +P +G +V YFPQG+ E V A+T +E++   P   +LP +L C++  +
Sbjct: 27  QLWKLCAGPLCDIPKLGEKVYYFPQGNIELVEASTREELNELQP-ICDLPSKLQCRVIAI 85

Query: 71  TMHADVETDEVYAQMTLQP-----LSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTS 125
            +  +  +DE YA++TL P     + P + ++ F P+          N F K LTASD S
Sbjct: 86  HLKVENNSDETYAKITLMPDTTQVVIPTQNENQFRPL---------VNSFTKVLTASDIS 136

Query: 126 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 185
            +G FSVP++ A +  P LD S   PAQEL+A DLH  +W FRH +RG P+RHLLTTGW+
Sbjct: 137 ANGVFSVPKKHAIECLPPLDMSQPLPAQELLAIDLHGNQWSFRHSYRGTPQRHLLTTGWN 196

Query: 186 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 245
            F ++K+LV GD ++F+  E  +L +GIRRA      +PSS++S D M  G++A+A HA 
Sbjct: 197 EFTTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKHAF 256

Query: 246 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 305
                F V + PR+  S+F++   K++ AV + + +VG RF M FE ++ S RRY GTI 
Sbjct: 257 DNQCMFIVVYKPRS--SQFIVSYDKFLDAV-NNKFNVGSRFTMRFEGDDLSERRYFGTII 313

Query: 306 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 347
           G+S+  P  W  S WRS++V WDE  +  R  +VS WEIE L
Sbjct: 314 GVSNFSP-HWKCSDWRSLEVQWDEFASFLRPNKVSPWEIEHL 354



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 55/89 (61%), Gaps = 3/89 (3%)

Query: 671 QIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQL 729
           Q  Q + TRT  KV   G ++GR++D+S  + Y++L  EL ++F ++G+ +   R+ W++
Sbjct: 503 QSKQFSSTRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQT--RNQWKI 560

Query: 730 VFVDRENDVLLLGDDPWEAFVSNVWYIKI 758
           +F   + D +L+GDDPW  F + V  I I
Sbjct: 561 IFTGSDEDEMLVGDDPWPEFCNMVKRIYI 589


>gi|356545983|ref|XP_003541412.1| PREDICTED: auxin response factor 18-like [Glycine max]
          Length = 647

 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 165/411 (40%), Positives = 221/411 (53%), Gaps = 59/411 (14%)

Query: 6   KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 65
           +CL+ +LWHACAG +V +PTV T+V YFPQGH+E      N          P +PP + C
Sbjct: 16  RCLDPQLWHACAGGMVQMPTVNTKVYYFPQGHAEHACGPVN------FKTCPKVPPFVPC 69

Query: 66  QLHNVTMHADVETDEVYAQMTLQPLSPEE-QKDTFVPIELGIPSKQPTNYFCKTLTASDT 124
           ++  V   AD ETDEVYA++ L PL+  +   D  V   +G  ++     F KTLT SD 
Sbjct: 70  RVVAVKYMADPETDEVYAKLKLVPLNANDVDYDHDV---IGAETRDKPASFAKTLTQSDA 126

Query: 125 STHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 184
           +  GGFSVPR  AE +FP LD+S  PP Q ++A+D+H   WKFRHI+RG P+RHLLTTGW
Sbjct: 127 NNGGGFSVPRYCAETIFPRLDYSADPPVQNILAKDVHGETWKFRHIYRGTPRRHLLTTGW 186

Query: 185 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRP--------------------PTVMP 224
           S FV+ K+LVAGDS++F+  E   L +GIRRA +                     P    
Sbjct: 187 STFVNHKKLVAGDSIVFLRAENGDLCVGIRRAKKGIGGGLETSSGWNPAGGNFPMPYSGF 246

Query: 225 SSVLSSDSMHI-------GL----------------LAAAAHAAATNSCFTVFFNPRASP 261
           S  L  D   I       GL                +  AA+ AA    F V + PRAS 
Sbjct: 247 SPFLREDDNRILRNGNSNGLNPSVSMMGKGKVRPEAIIEAANLAANKKPFEVVYYPRAST 306

Query: 262 SEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHW 320
            EF +  +  V+A   TR   G+RF+M FETE+SS +  +MGTI+ +   DP+ W NS W
Sbjct: 307 PEFCVKAS-LVEAAMQTRWYSGIRFKMAFETEDSSRISWFMGTISSVQVADPLNWPNSPW 365

Query: 321 RSVKVGWDESTAGERQPRVSLWEIEPLTTFPM--YPSLFPLR--LKRPWHP 367
           R ++V WDE    +   RVS W +E ++  P   +    P R  L+ P HP
Sbjct: 366 RLLQVTWDEPDLLQNVRRVSPWLVELVSNMPAIHFSPFSPPRKKLRLPQHP 416



 Score = 43.9 bits (102), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 6/79 (7%)

Query: 682 VKVY-KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 740
            KV+ +S  VGR++D+S   SY+EL  +L  MFGIE K E   R    +++ D    +  
Sbjct: 564 CKVFMESEDVGRTMDLSLLRSYDELHRKLADMFGIE-KSEMLSR----VLYCDSVGAIKH 618

Query: 741 LGDDPWEAFVSNVWYIKIL 759
           +GD+P+  F      + IL
Sbjct: 619 IGDEPFSDFTRTAKRLTIL 637


>gi|8778352|gb|AAF79360.1|AC007887_19 F15O4.42 [Arabidopsis thaliana]
          Length = 570

 Score =  276 bits (707), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 146/342 (42%), Positives = 211/342 (61%), Gaps = 19/342 (5%)

Query: 11  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 70
           +LW  CAGPL  +P +G +V YFPQG+ E V A+T +E++   P   +LP +L C++  +
Sbjct: 27  QLWKLCAGPLCDIPKLGEKVYYFPQGNIELVEASTREELNELQP-ICDLPSKLQCRVIAI 85

Query: 71  TMHADVETDEVYAQMTLQP-----LSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTS 125
            +  +  +DE YA++TL P     + P + ++ F P+          N F K LTASD S
Sbjct: 86  HLKVENNSDETYAKITLMPDTTQVVIPTQNENQFRPL---------VNSFTKVLTASDIS 136

Query: 126 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 185
            +G FSVP++ A +  P LD S   PAQEL+A DLH  +W FRH +RG P+RHLLTTGW+
Sbjct: 137 ANGVFSVPKKHAIECLPPLDMSQPLPAQELLAIDLHGNQWSFRHSYRGTPQRHLLTTGWN 196

Query: 186 VFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAA 245
            F ++K+LV GD ++F+  E  +L +GIRRA      +PSS++S D M  G++A+A HA 
Sbjct: 197 EFTTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKHAF 256

Query: 246 ATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTIT 305
                F V + PR+  S+F++   K++ AV + + +VG RF M FE ++ S RRY GTI 
Sbjct: 257 DNQCMFIVVYKPRS--SQFIVSYDKFLDAV-NNKFNVGSRFTMRFEGDDLSERRYFGTII 313

Query: 306 GISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 347
           G+S+  P  W  S WRS++V WDE  +  R  +VS WEIE L
Sbjct: 314 GVSNFSP-HWKCSDWRSLEVQWDEFASFLRPNKVSPWEIEHL 354



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 41/58 (70%), Gaps = 2/58 (3%)

Query: 689 SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPW 746
           ++GR++D+S  + Y++L  EL ++F ++G+ +   R+ W+++F   + D +L+GDDPW
Sbjct: 514 TIGRAVDLSVLNGYDQLILELEKLFDLKGQLQT--RNQWKIIFTGSDEDEMLVGDDPW 569


>gi|356550188|ref|XP_003543470.1| PREDICTED: auxin response factor 18-like [Glycine max]
          Length = 670

 Score =  276 bits (705), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 159/377 (42%), Positives = 216/377 (57%), Gaps = 37/377 (9%)

Query: 5   NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLI 64
           +K L+ +LWHACAG +V +P V ++V YFPQGH+E   +     VD      P +PP ++
Sbjct: 5   DKSLDPQLWHACAGGMVQMPPVNSKVFYFPQGHAEHAQSN----VDFGAARIP-IPPLIL 59

Query: 65  CQLHNVTMHADVETDEVYAQMTLQPLSPEE--QKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           C++  V   AD ETDEV+A++ L PL   E   +D+    E    S++P + F KTLT S
Sbjct: 60  CRVAAVKFLADPETDEVFARLRLVPLRNSELDYEDSDANGE-AEGSEKPAS-FAKTLTQS 117

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           D +  GGFSVPR  AE +FP LD+S +PP Q +IARD+H   WKFRHI+RG P+RHLLTT
Sbjct: 118 DANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIARDVHGEVWKFRHIYRGTPRRHLLTT 177

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMP------------------ 224
           GWS FV+ K+LVAGDS++F+  E   L +GIRRA R     P                  
Sbjct: 178 GWSSFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKRGGVGGPEGPCGWSSYGSGGLGLGP 237

Query: 225 ----SSVLSSDSMHIGL----LAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVF 276
               S  +  +S    +    +  A   AA+N  F V + PRA+  EF I  T  V+   
Sbjct: 238 YGAFSGFMREESGRAKVSGESVREAVTLAASNQAFEVVYYPRANTPEFCI-RTSAVRGAM 296

Query: 277 HTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGER 335
             +   GMRF+M FETE+SS +  +MGTI  +  LDP+RW NS WR ++V WDE      
Sbjct: 297 RIQWCSGMRFKMPFETEDSSRISWFMGTIASVQVLDPIRWPNSPWRLLQVSWDEPDLLHN 356

Query: 336 QPRVSLWEIEPLTTFPM 352
             RVS W +E ++  P+
Sbjct: 357 VKRVSPWLVELVSNVPI 373



 Score = 44.7 bits (104), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 6/88 (6%)

Query: 674 QLTPTRTFVKVY-KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFV 732
           QL    +  KV+ +S  VGR+LD+S  SSY EL   L  MFGIE    D L     +++ 
Sbjct: 552 QLGSDTSHCKVFMESEDVGRTLDLSCLSSYQELYMRLANMFGIERS--DMLS---HVLYC 606

Query: 733 DRENDVLLLGDDPWEAFVSNVWYIKILS 760
           D    +  +G++P+  F+     + IL+
Sbjct: 607 DSSGALKQIGEEPFSEFMKTAKRLTILT 634


>gi|15219633|ref|NP_174784.1| auxin response factor 15 [Arabidopsis thaliana]
 gi|332193684|gb|AEE31805.1| auxin response factor 15 [Arabidopsis thaliana]
          Length = 598

 Score =  275 bits (704), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 145/338 (42%), Positives = 209/338 (61%), Gaps = 6/338 (1%)

Query: 11  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 70
           +LW  CAGPL  +P +G +V YFPQG+ E V A+T +E++   P   +LP +L C++  +
Sbjct: 27  QLWKLCAGPLCDIPKLGEKVYYFPQGNIELVEASTREELNELQP-ICDLPSKLQCRVIAI 85

Query: 71  TMHADVETDEVYAQMTLQP-LSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTHGG 129
            +  +  +DE YA++TL P  +  E     +P +     +   N F K LTASD S +G 
Sbjct: 86  HLKVENNSDETYAKITLMPDTTVSENLQVVIPTQNENQFRPLVNSFTKVLTASDISANGV 145

Query: 130 FSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVS 189
           FSVP++ A +  P LD S   PAQEL+A DLH  +W FRH +RG P+RHLLTTGW+ F +
Sbjct: 146 FSVPKKHAIECLPPLDMSQPLPAQELLAIDLHGNQWSFRHSYRGTPQRHLLTTGWNEFTT 205

Query: 190 AKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAATNS 249
           +K+LV GD ++F+  E  +L +GIRRA      +PSS++S D M  G++A+A HA     
Sbjct: 206 SKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKHAFDNQC 265

Query: 250 CFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGISD 309
            F V + PR+  S+F++   K++ AV + + +VG RF M FE ++ S RRY GTI G+S+
Sbjct: 266 MFIVVYKPRS--SQFIVSYDKFLDAV-NNKFNVGSRFTMRFEGDDLSERRYFGTIIGVSN 322

Query: 310 LDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 347
             P  W  S WRS++V WDE  +  R  +VS WEIE L
Sbjct: 323 FSP-HWKCSDWRSLEVQWDEFASFLRPNKVSPWEIEHL 359



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 55/89 (61%), Gaps = 3/89 (3%)

Query: 671 QIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQL 729
           Q  Q + TRT  KV   G ++GR++D+S  + Y++L  EL ++F ++G+ +   R+ W++
Sbjct: 508 QSKQFSSTRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQT--RNQWKI 565

Query: 730 VFVDRENDVLLLGDDPWEAFVSNVWYIKI 758
           +F   + D +L+GDDPW  F + V  I I
Sbjct: 566 IFTGSDEDEMLVGDDPWPEFCNMVKRIYI 594


>gi|79357149|ref|NP_174758.2| auxin response factor 20 [Arabidopsis thaliana]
 gi|206729928|sp|Q9C7I9.3|ARFT_ARATH RecName: Full=Auxin response factor 20
 gi|49616365|gb|AAT67079.1| ARF20 [Arabidopsis thaliana]
 gi|332193650|gb|AEE31771.1| auxin response factor 20 [Arabidopsis thaliana]
          Length = 590

 Score =  275 bits (703), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 147/366 (40%), Positives = 215/366 (58%), Gaps = 21/366 (5%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G    +  +LW  CAGPL  +P +G  V YFPQG+ E V A+T +E++   P   +LP +
Sbjct: 19  GSKSYMYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVDASTREELNELQP-ICDLPSK 77

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQP-----LSPEEQKDTFVPIELGIPSKQPTNYFCK 117
           L C++  + +  +  +DE YA++TL P     + P + ++ F P+          N F K
Sbjct: 78  LQCRVIAIHLKVENNSDETYAEITLMPDTTQVVIPTQSENQFRPL---------VNSFTK 128

Query: 118 TLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKR 177
            LTASDTS +GGF VP++ A +  P L      PAQEL+A+DLH  +W+FRH +RG P+R
Sbjct: 129 VLTASDTSAYGGFFVPKKHAIECLPPLPL----PAQELLAKDLHGNQWRFRHSYRGTPQR 184

Query: 178 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGL 237
           H LTTGW+ F ++K+LV GD ++F+  E  +L +GIRRA      +PSS++S D M  G+
Sbjct: 185 HSLTTGWNEFTTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGV 244

Query: 238 LAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSV 297
           +A+A HA      F V + P    S+F++   K++ A+ + +  VG RF M FE ++ S 
Sbjct: 245 IASAKHALDNQCIFIVVYKPSIRSSQFIVSYDKFLDAM-NNKFIVGSRFTMRFEGDDFSE 303

Query: 298 RRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLF 357
           RRY GTI G++D  P  W  S WRS++V WDE  +  R  +VS WEIE L +    P   
Sbjct: 304 RRYFGTIIGVNDFSP-HWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLMSALNVPRSS 362

Query: 358 PLRLKR 363
            L+ KR
Sbjct: 363 LLKNKR 368



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 57/96 (59%), Gaps = 3/96 (3%)

Query: 671 QIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQL 729
           Q  Q   TRT  KV   G ++GR++D+S  + Y++L  EL ++F ++G+ +   R+ W++
Sbjct: 487 QSKQFGSTRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQT--RNQWKI 544

Query: 730 VFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQ 765
            F D +   +L+GDDPW  F   V  I I S E+V+
Sbjct: 545 AFTDSDGYEMLVGDDPWPEFCKMVKKILIYSKEEVK 580


>gi|225435334|ref|XP_002282437.1| PREDICTED: auxin response factor 18-like [Vitis vinifera]
          Length = 711

 Score =  275 bits (702), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 191/535 (35%), Positives = 267/535 (49%), Gaps = 92/535 (17%)

Query: 6   KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 65
           K L+S+LWHACAG +V +P V ++V YFPQGH+E   A TN +  +     P +P  ++C
Sbjct: 6   KSLDSQLWHACAGGMVQMPLVSSKVFYFPQGHAEH--AHTNVDFAA----APRIPALVLC 59

Query: 66  QLHNVTMHADVETDEVYAQMTLQPLSPEE--QKDTFVPIELGIPSKQPTNYFCKTLTASD 123
           ++  V   AD ETDEVYA++ L P++  E   +D  V    G  + +    F KTLT SD
Sbjct: 60  RVAAVKFMADPETDEVYAKIRLVPIANNELDCEDDGVMGSSGSEAPEKPASFAKTLTQSD 119

Query: 124 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 183
            +  GGFSVPR  AE +FP LD+S  PP Q +IA+D+H   WKFRHI+RG P+RHLLTTG
Sbjct: 120 ANNGGGFSVPRYCAETIFPRLDYSADPPVQTVIAKDVHGEIWKFRHIYRGTPRRHLLTTG 179

Query: 184 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR----------------PPTVMPSSV 227
           WS FV+ K+LVAGDS++F+  E   L +GIRRA R                P    P  +
Sbjct: 180 WSTFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKRGIAGGPESPSGWNPASPYAGFPKFL 239

Query: 228 LSSDS--MHIGL----------------------LAAAAHAAATNSCFTVFFNPRASPSE 263
              +S  M  G+                      +  AA  AA    F V + PRAS  E
Sbjct: 240 REDESKLMRNGVGGNSNPGSGGGLRGGRRVRPESVVEAATLAANGQPFEVVYYPRASTPE 299

Query: 264 FVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRS 322
           F +  +  V++    +   GMRF+M FETE+SS +  +MGTI+ +   DP+RW NS WR 
Sbjct: 300 FCVKASG-VRSAVRIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVADPIRWPNSPWRL 358

Query: 323 VKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL-----RLKRPWHPS--------T 369
           ++V WDE    +   RVS W +E ++  P+   L P      +L+ P HP          
Sbjct: 359 LQVTWDEPDLLQNVKRVSPWLVELVSNMPII-HLSPFSPPRKKLRIPQHPDFPFDGQFPM 417

Query: 370 SSFNDN-----------RDETASGLNWLRGGTGEQGLTTLNFQSL---GMFPWMQQRVEP 415
           SSF+ N            D T +G+   R       L+ L+  +    G+FP   QR + 
Sbjct: 418 SSFSSNPLGSSSPLCCLPDNTPAGIQGARHAQYGISLSDLHLNNKLQSGLFPTSFQRFDQ 477

Query: 416 -SFLGN-------DHNQQYQAMLAAG------MQSGDPVRQQFMQLQQPFQYLQQ 456
            S + N        +N+    +L  G       +S +    QF+   QP    QQ
Sbjct: 478 HSRITNGIITAHRKNNESISCLLTMGNSSQNLEKSANEKTPQFLLFGQPILTEQQ 532



 Score = 42.7 bits (99), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 48/113 (42%), Gaps = 13/113 (11%)

Query: 664 ELLHNVG-------QIDQLTPTRTFVKVY-KSGSVGRSLDISRFSSYNELREELGQMFGI 715
           E L NVG       Q  ++       KV+ +S  VGRSLD+S   SY EL   L  MFGI
Sbjct: 577 ENLSNVGFSWHQGFQTTEIGLDTGHCKVFMESEDVGRSLDLSVLGSYEELYTRLANMFGI 636

Query: 716 EGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMG 768
           E        +   +++ D    V   GD+P+  F      + IL       +G
Sbjct: 637 ERS-----ETFSHVLYRDATGAVKHTGDEPFSDFTKKAKRLTILMDSGSNNIG 684


>gi|414877787|tpg|DAA54918.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
          Length = 777

 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 155/371 (41%), Positives = 206/371 (55%), Gaps = 66/371 (17%)

Query: 2   IGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 61
            G    L  ELW ACAGPL  +P +G +V Y PQGH EQV A+TN+  +       NLP 
Sbjct: 17  CGGKDALFVELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPW 76

Query: 62  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFV--------PIELGIPSKQP-T 112
           ++ C+L N+ +  + +TDEVYAQ+TL P   +++  +          P  L   ++ P  
Sbjct: 77  KIPCKLMNIELKVEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHI 136

Query: 113 NYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFR 172
           + FCKTLTASDTSTHGGFSV RR A++  P LD S  PP QEL+A+DLH  EW+FRHIFR
Sbjct: 137 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFR 196

Query: 173 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDS 232
           GQP+RHLL +GWSVFVSAKR                                        
Sbjct: 197 GQPRRHLLQSGWSVFVSAKR---------------------------------------- 216

Query: 233 MHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFET 292
               L+A  A           F   R SP+EFV+   +Y +++     S+GMRF+M FE 
Sbjct: 217 ----LVAGDA-----------FIFLRTSPAEFVVSRDRYYESL-KRNYSIGMRFKMRFEG 260

Query: 293 EESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPM 352
           EE++ +R+ GTI GI   DP  W++S WRS+KV WDE ++  R  RVS W+IEP +  P 
Sbjct: 261 EEAAEQRFTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEP-SVSPC 319

Query: 353 YPSLFPLRLKR 363
           + +  P+R KR
Sbjct: 320 HVNPLPVRFKR 330



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 55/137 (40%), Positives = 81/137 (59%), Gaps = 2/137 (1%)

Query: 660 QDSSELLHNVGQIDQLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGK 718
           Q S E   N+    Q + TR+  KV+K GS +GRS+D+++F+ Y+EL  EL QMF  +G+
Sbjct: 630 QPSPEATLNIQNKVQSSSTRSCKKVHKQGSALGRSIDLTKFACYDELIAELDQMFDFDGE 689

Query: 719 FEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPS 778
            + P +S W +V+ D E D++L+GDDPW  F   V  I I + E+V++M    + S S  
Sbjct: 690 LKSPCKS-WLVVYTDNEGDIMLVGDDPWNEFCDMVHKIFIYTREEVERMNPGALNSRSED 748

Query: 779 SGQRANSRGNCGRDPVG 795
           S   +  RG   RDP G
Sbjct: 749 SLSDSLGRGVASRDPRG 765


>gi|414877788|tpg|DAA54919.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
          Length = 771

 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 155/371 (41%), Positives = 206/371 (55%), Gaps = 66/371 (17%)

Query: 2   IGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 61
            G    L  ELW ACAGPL  +P +G +V Y PQGH EQV A+TN+  +       NLP 
Sbjct: 15  CGGKDALFVELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPW 74

Query: 62  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFV--------PIELGIPSKQP-T 112
           ++ C+L N+ +  + +TDEVYAQ+TL P   +++  +          P  L   ++ P  
Sbjct: 75  KIPCKLMNIELKVEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHI 134

Query: 113 NYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFR 172
           + FCKTLTASDTSTHGGFSV RR A++  P LD S  PP QEL+A+DLH  EW+FRHIFR
Sbjct: 135 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFR 194

Query: 173 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDS 232
           GQP+RHLL +GWSVFVSAKR                                        
Sbjct: 195 GQPRRHLLQSGWSVFVSAKR---------------------------------------- 214

Query: 233 MHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFET 292
               L+A  A           F   R SP+EFV+   +Y +++     S+GMRF+M FE 
Sbjct: 215 ----LVAGDA-----------FIFLRTSPAEFVVSRDRYYESL-KRNYSIGMRFKMRFEG 258

Query: 293 EESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPM 352
           EE++ +R+ GTI GI   DP  W++S WRS+KV WDE ++  R  RVS W+IEP +  P 
Sbjct: 259 EEAAEQRFTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEP-SVSPC 317

Query: 353 YPSLFPLRLKR 363
           + +  P+R KR
Sbjct: 318 HVNPLPVRFKR 328



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 55/137 (40%), Positives = 81/137 (59%), Gaps = 2/137 (1%)

Query: 660 QDSSELLHNVGQIDQLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGK 718
           Q S E   N+    Q + TR+  KV+K GS +GRS+D+++F+ Y+EL  EL QMF  +G+
Sbjct: 624 QPSPEATLNIQNKVQSSSTRSCKKVHKQGSALGRSIDLTKFACYDELIAELDQMFDFDGE 683

Query: 719 FEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPS 778
            + P +S W +V+ D E D++L+GDDPW  F   V  I I + E+V++M    + S S  
Sbjct: 684 LKSPCKS-WLVVYTDNEGDIMLVGDDPWNEFCDMVHKIFIYTREEVERMNPGALNSRSED 742

Query: 779 SGQRANSRGNCGRDPVG 795
           S   +  RG   RDP G
Sbjct: 743 SLSDSLGRGVASRDPRG 759


>gi|255573830|ref|XP_002527834.1| Auxin response factor, putative [Ricinus communis]
 gi|223532758|gb|EEF34537.1| Auxin response factor, putative [Ricinus communis]
          Length = 620

 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 153/346 (44%), Positives = 212/346 (61%), Gaps = 8/346 (2%)

Query: 5   NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLI 64
           N  L  ELW ACAGPLV+LP  G RV YFPQGH EQ+ A   ++ +  + +  NLP +++
Sbjct: 42  NNALYKELWDACAGPLVTLPREGERVYYFPQGHIEQLGAPIQQQSEHQMASL-NLPSKIL 100

Query: 65  CQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIE-LGIPSKQPTNYFCKTLTASD 123
           C++ NV   A+  TD+VYAQ+ L P    EQ D   P   L  P +   + F + LT SD
Sbjct: 101 CKVINVQCKAEPITDQVYAQIMLLP--EPEQIDVISPDPPLPEPERCVVHSFRRILTVSD 158

Query: 124 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 183
            S+H  F V ++ AE   P LD S Q P QEL+A DL+  +W F+HIF+G+  +HLLTTG
Sbjct: 159 ISSHDHFFVDQKHAEHCLPPLDMSQQLPWQELVATDLNGNKWHFQHIFQGKSNKHLLTTG 218

Query: 184 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAH 243
           WS FVS+K+LV+GD  +F+  E  +L +G+RR +   T + SS  S+   H  LLA A++
Sbjct: 219 WSAFVSSKKLVSGDMFIFLRGENGELRVGVRRLMGRKTNILSSATSNQIRH-SLLAVASY 277

Query: 244 AAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGT 303
           A +T S F VF+ PR S SEF++ + KY++A  H +  +GMRF M FE EE  + R  GT
Sbjct: 278 AISTGSLFCVFYEPRTSRSEFIVSVNKYIEARNH-KFCIGMRFLMRFEGEEVPIERINGT 336

Query: 304 ITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT 349
           I  + +  P RW +S WR  KV WDE +      RVS WE+E +++
Sbjct: 337 IVSM-ETSP-RWPDSEWRCFKVRWDEPSLIVHPERVSPWEMENISS 380



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 43/70 (61%), Gaps = 1/70 (1%)

Query: 689 SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEA 748
           ++GRS+D+++F  + +L +EL  MF IEG+     +  W +V+ D ++++ L+GD  WE 
Sbjct: 548 ALGRSIDLTKFKCHEDLIKELENMFEIEGELSGSTKK-WLIVYTDADSEMKLVGDYQWEV 606

Query: 749 FVSNVWYIKI 758
             + V  I I
Sbjct: 607 VCNMVKKILI 616


>gi|414877790|tpg|DAA54921.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
          Length = 775

 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 155/371 (41%), Positives = 206/371 (55%), Gaps = 66/371 (17%)

Query: 2   IGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 61
            G    L  ELW ACAGPL  +P +G +V Y PQGH EQV A+TN+  +       NLP 
Sbjct: 15  CGGKDALFVELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPW 74

Query: 62  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFV--------PIELGIPSKQP-T 112
           ++ C+L N+ +  + +TDEVYAQ+TL P   +++  +          P  L   ++ P  
Sbjct: 75  KIPCKLMNIELKVEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHI 134

Query: 113 NYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFR 172
           + FCKTLTASDTSTHGGFSV RR A++  P LD S  PP QEL+A+DLH  EW+FRHIFR
Sbjct: 135 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFR 194

Query: 173 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDS 232
           GQP+RHLL +GWSVFVSAKR                                        
Sbjct: 195 GQPRRHLLQSGWSVFVSAKR---------------------------------------- 214

Query: 233 MHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFET 292
               L+A  A           F   R SP+EFV+   +Y +++     S+GMRF+M FE 
Sbjct: 215 ----LVAGDA-----------FIFLRTSPAEFVVSRDRYYESL-KRNYSIGMRFKMRFEG 258

Query: 293 EESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPM 352
           EE++ +R+ GTI GI   DP  W++S WRS+KV WDE ++  R  RVS W+IEP +  P 
Sbjct: 259 EEAAEQRFTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEP-SVSPC 317

Query: 353 YPSLFPLRLKR 363
           + +  P+R KR
Sbjct: 318 HVNPLPVRFKR 328



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 55/137 (40%), Positives = 81/137 (59%), Gaps = 2/137 (1%)

Query: 660 QDSSELLHNVGQIDQLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGK 718
           Q S E   N+    Q + TR+  KV+K GS +GRS+D+++F+ Y+EL  EL QMF  +G+
Sbjct: 628 QPSPEATLNIQNKVQSSSTRSCKKVHKQGSALGRSIDLTKFACYDELIAELDQMFDFDGE 687

Query: 719 FEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPS 778
            + P +S W +V+ D E D++L+GDDPW  F   V  I I + E+V++M    + S S  
Sbjct: 688 LKSPCKS-WLVVYTDNEGDIMLVGDDPWNEFCDMVHKIFIYTREEVERMNPGALNSRSED 746

Query: 779 SGQRANSRGNCGRDPVG 795
           S   +  RG   RDP G
Sbjct: 747 SLSDSLGRGVASRDPRG 763


>gi|414877791|tpg|DAA54922.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
          Length = 652

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 155/371 (41%), Positives = 206/371 (55%), Gaps = 66/371 (17%)

Query: 2   IGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 61
            G    L  ELW ACAGPL  +P +G +V Y PQGH EQV A+TN+  +       NLP 
Sbjct: 15  CGGKDALFVELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPW 74

Query: 62  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFV--------PIELGIPSKQP-T 112
           ++ C+L N+ +  + +TDEVYAQ+TL P   +++  +          P  L   ++ P  
Sbjct: 75  KIPCKLMNIELKVEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHI 134

Query: 113 NYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFR 172
           + FCKTLTASDTSTHGGFSV RR A++  P LD S  PP QEL+A+DLH  EW+FRHIFR
Sbjct: 135 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFR 194

Query: 173 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDS 232
           GQP+RHLL +GWSVFVSAKR                                        
Sbjct: 195 GQPRRHLLQSGWSVFVSAKR---------------------------------------- 214

Query: 233 MHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFET 292
               L+A  A           F   R SP+EFV+   +Y +++     S+GMRF+M FE 
Sbjct: 215 ----LVAGDA-----------FIFLRTSPAEFVVSRDRYYESL-KRNYSIGMRFKMRFEG 258

Query: 293 EESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPM 352
           EE++ +R+ GTI GI   DP  W++S WRS+KV WDE ++  R  RVS W+IEP +  P 
Sbjct: 259 EEAAEQRFTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEP-SVSPC 317

Query: 353 YPSLFPLRLKR 363
           + +  P+R KR
Sbjct: 318 HVNPLPVRFKR 328


>gi|5091627|gb|AAD39615.1|AC007454_14 Similar to gb|AF082176 auxin response factor 9 from Arabidopsis
           thaliana [Arabidopsis thaliana]
          Length = 619

 Score =  273 bits (698), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 154/392 (39%), Positives = 220/392 (56%), Gaps = 45/392 (11%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQ---------------------- 40
           G    +  +LW  CAGPL  +P +G +V YFPQGH E                       
Sbjct: 19  GSKSYVYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVSSLSLSLPLFSFSLHLFSLSL 78

Query: 41  ----VAATTNKEVDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQP-----LS 91
               V  +T +E++   P   +LP +L C++  + +  +  +DE YA++TL P     + 
Sbjct: 79  LSLSVETSTREELNELQP-ICDLPSKLQCRVIAIHLKVENNSDETYAEITLMPDTTQVVI 137

Query: 92  PEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPP 151
           P + ++ F P+          N F K LTASDTS HGGF VP++ A +  PSLD S   P
Sbjct: 138 PTQNENQFRPL---------VNSFTKVLTASDTSAHGGFFVPKKHAIECLPSLDMSQPLP 188

Query: 152 AQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLL 211
           AQEL+A DLH  +W+F H +RG P+RHLLTTGW+ F ++K+LVAGD ++F+  E  +L +
Sbjct: 189 AQELLAIDLHGNQWRFNHNYRGTPQRHLLTTGWNAFTTSKKLVAGDVIVFVRGETGELRV 248

Query: 212 GIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKY 271
           GIRRA      +PSS++S D M  G++A+A HA      FTV + PR+  S+F++   K+
Sbjct: 249 GIRRARHQQGNIPSSIVSIDCMRHGVVASAKHAFDNQCMFTVVYKPRS--SKFIVSYDKF 306

Query: 272 VKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDEST 331
           + AV + + +VG RF M  E ++ S RR  GTI G+SD  P  W  S WRS++V WDE T
Sbjct: 307 LDAV-NNKFNVGSRFTMRLEGDDFSERRCFGTIIGVSDFSP-HWKCSEWRSLEVQWDEFT 364

Query: 332 AGERQPRVSLWEIEPLTTFPMYPSLFPLRLKR 363
           +     +VS W+IE L      P  F L+ KR
Sbjct: 365 SFPGPKKVSPWDIEHLMPAINVPRSFLLKNKR 396



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 84/169 (49%), Gaps = 17/169 (10%)

Query: 592 SYNGKDAAVGTENCNTDS-QNSVVFGVHIDSSGLLLPTTVSSFTTSVDPGVSSMPLGDSG 650
           +YN +      EN  T +  N  +FGV +D+     P  +      +   +S +  G   
Sbjct: 462 NYNNQMVTEMEENITTKTGTNFRLFGVTLDT-----PPVIKDPIEEIGSEISKLTEGKKF 516

Query: 651 FHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREEL 709
               +   ++  +E+     Q  Q + +RT  KV   G ++GR++D+S  + Y++L  EL
Sbjct: 517 ---GLSQTLRSPTEI-----QNKQFSSSRTCTKVQMQGVTIGRAVDLSVLNGYDQLILEL 568

Query: 710 GQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKI 758
            ++F I+G+ +   R+ W++ F D + D +L+GDDPW  F + V  I I
Sbjct: 569 EKLFDIKGQLQT--RNQWEIAFTDSDEDKMLVGDDPWPEFCNMVKKIFI 615


>gi|449451004|ref|XP_004143252.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
          Length = 698

 Score =  273 bits (698), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 159/410 (38%), Positives = 220/410 (53%), Gaps = 56/410 (13%)

Query: 6   KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 65
           KCL+ +LWHACAG +V +P V  RV YFPQGH+E   A  +        N P +P   +C
Sbjct: 16  KCLDPQLWHACAGGMVQMPPVNARVFYFPQGHAEHSCAPVD------FRNCPKVPSYTLC 69

Query: 66  QLHNVTMHADVETDEVYAQMTLQPLSPEEQ--KDTFVPIELGIPSKQPTNYFCKTLTASD 123
           ++  +   AD +TDEV+A++ L P++  E   +D  +    G    +PT+ F KTLT SD
Sbjct: 70  RVSAIKFLADPDTDEVFAKLRLIPINGSELDFEDDGIGRLNGSEQDKPTS-FAKTLTQSD 128

Query: 124 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 183
            +  GGFSVPR  AE +FP LD+S  PP Q ++A+D+H   WKFRHI+RG P+RHLLTTG
Sbjct: 129 ANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRGTPRRHLLTTG 188

Query: 184 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSD------SMHIGL 237
           WS FV+ K+LVAGDS++F+  E   L +GIRRA R     P S    +      ++  G 
Sbjct: 189 WSTFVNHKKLVAGDSIVFLRAENGDLCVGIRRAKRGIGDGPESSCGWNPAGGNCAVSYGA 248

Query: 238 LAA-----------------------------------AAHAAATNSCFTVFFNPRASPS 262
            +A                                   AA  A+    F + F PRAS  
Sbjct: 249 FSAFLREDDNRLTRSANGMNGNGSLMGKGKVKPESVTEAAKLASNGQPFEIIFYPRASTP 308

Query: 263 EFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWR 321
           EF +     VKA    R   GMRF+M FETE+SS +  +MGTI  +   DP+RW  S WR
Sbjct: 309 EFCVK-AALVKAALQIRWCSGMRFKMAFETEDSSRISWFMGTINSVQVSDPLRWPESPWR 367

Query: 322 SVKVGWDESTAGERQPRVSLWEIEPLTTF-PMYPSLFP---LRLKRPWHP 367
            ++V WDE    +   RVS W +E +++  P++ + F     + + P HP
Sbjct: 368 LLQVTWDEPDLLQNVKRVSPWLVELVSSMSPIHLAPFSPPRKKFRYPQHP 417



 Score = 43.5 bits (101), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 6/88 (6%)

Query: 682 VKVY-KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 740
            KV+ +S  VGR+LD+S   SY EL  +LG MFGI     D   +   +++ D    V  
Sbjct: 615 CKVFMESEDVGRTLDLSSLGSYEELYRKLGNMFGI-----DNSETLNHVLYRDVSGAVKH 669

Query: 741 LGDDPWEAFVSNVWYIKILSPEDVQKMG 768
           +GD+ +  F+     + IL+      +G
Sbjct: 670 VGDEQFSDFIKTARRLTILTDSGSNNVG 697


>gi|414877789|tpg|DAA54920.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
          Length = 661

 Score =  273 bits (698), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 155/371 (41%), Positives = 206/371 (55%), Gaps = 66/371 (17%)

Query: 2   IGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 61
            G    L  ELW ACAGPL  +P +G +V Y PQGH EQV A+TN+  +       NLP 
Sbjct: 15  CGGKDALFVELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPW 74

Query: 62  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFV--------PIELGIPSKQP-T 112
           ++ C+L N+ +  + +TDEVYAQ+TL P   +++  +          P  L   ++ P  
Sbjct: 75  KIPCKLMNIELKVEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHI 134

Query: 113 NYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFR 172
           + FCKTLTASDTSTHGGFSV RR A++  P LD S  PP QEL+A+DLH  EW+FRHIFR
Sbjct: 135 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFR 194

Query: 173 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDS 232
           GQP+RHLL +GWSVFVSAKR                                        
Sbjct: 195 GQPRRHLLQSGWSVFVSAKR---------------------------------------- 214

Query: 233 MHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFET 292
               L+A  A           F   R SP+EFV+   +Y +++     S+GMRF+M FE 
Sbjct: 215 ----LVAGDA-----------FIFLRTSPAEFVVSRDRYYESL-KRNYSIGMRFKMRFEG 258

Query: 293 EESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPM 352
           EE++ +R+ GTI GI   DP  W++S WRS+KV WDE ++  R  RVS W+IEP +  P 
Sbjct: 259 EEAAEQRFTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEP-SVSPC 317

Query: 353 YPSLFPLRLKR 363
           + +  P+R KR
Sbjct: 318 HVNPLPVRFKR 328


>gi|302790307|ref|XP_002976921.1| hypothetical protein SELMODRAFT_443304 [Selaginella moellendorffii]
 gi|300155399|gb|EFJ22031.1| hypothetical protein SELMODRAFT_443304 [Selaginella moellendorffii]
          Length = 752

 Score =  273 bits (698), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 158/417 (37%), Positives = 229/417 (54%), Gaps = 69/417 (16%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPN-LPP 61
           G+ K L+ +LW ACAG +V LPTVG++++YFPQGH+EQ A++         P++P  L P
Sbjct: 33  GEEKHLDQQLWQACAGSMVQLPTVGSKIIYFPQGHAEQAASS---------PDFPRALGP 83

Query: 62  Q--LICQLHNVTMHADVETDEVYAQMTLQPLS-PEEQKDTFVPIELGIPSKQPTNYFCKT 118
              + C++ +V   AD ETDEV+A + L P S  +E  D    +    PS +    F KT
Sbjct: 84  AGTVPCRVLSVKFLADKETDEVFASLRLHPESGSDEDNDRAAALS---PSPEKPASFAKT 140

Query: 119 LTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRH 178
           LT SD +  GGFSVPR  AE +FP LD+S+ PP Q ++A+D+H   WKFRHI+RG P+RH
Sbjct: 141 LTQSDANNGGGFSVPRYCAETIFPRLDYSVDPPVQTVLAKDVHGEVWKFRHIYRGTPRRH 200

Query: 179 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA---------------------- 216
           LLTTGWS FV+ K+LVAGD+++F+ +   +L +G+RR+                      
Sbjct: 201 LLTTGWSTFVNHKKLVAGDAIVFLRSNSGELCVGVRRSMRGGGSGNADALLWHSASSRSS 260

Query: 217 ----IRPP--TVMPSSVLSSDS-----------------------MHIGLLAAAAHAAAT 247
               +RPP  T +    L  ++                       +    +  AA  AA+
Sbjct: 261 SRWELRPPMDTGLSDGTLMGENGSSRSAGGGGGNGGGSFTRNRAKVTAKSVLDAATLAAS 320

Query: 248 NSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITG 306
              F V + PRAS +EF +   + V+A        GMRF+M FETE+SS +  +MGTI+ 
Sbjct: 321 GKAFEVVYYPRASTAEFCV-RAQTVRAALSHGWYAGMRFKMAFETEDSSRISWFMGTISA 379

Query: 307 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKR 363
           +   DP+ W +S WR ++V WDE    +   RVS W++E ++T PM    F L  K+
Sbjct: 380 VQAADPILWPSSPWRVLQVAWDEPDLLQGVSRVSPWQVELVSTLPMQLPPFSLPRKK 436



 Score = 47.4 bits (111), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 5/75 (6%)

Query: 686 KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDP 745
           +SG V R+LD+S F SY+EL ++L  +F +     D  +   ++V+ D E   +  G +P
Sbjct: 678 ESGDVKRTLDLSSFGSYDELYKQLATVFCV-----DMAKISGRVVYKDSEGSTIHTGGEP 732

Query: 746 WEAFVSNVWYIKILS 760
           +  FV +V  + IL+
Sbjct: 733 YANFVKSVRRLTILA 747


>gi|449482590|ref|XP_004156337.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
          Length = 701

 Score =  273 bits (698), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 159/410 (38%), Positives = 220/410 (53%), Gaps = 56/410 (13%)

Query: 6   KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 65
           KCL+ +LWHACAG +V +P V  RV YFPQGH+E   A  +        N P +P   +C
Sbjct: 16  KCLDPQLWHACAGGMVQMPPVNARVFYFPQGHAEHSCAPVD------FRNCPKVPSYTLC 69

Query: 66  QLHNVTMHADVETDEVYAQMTLQPLSPEEQ--KDTFVPIELGIPSKQPTNYFCKTLTASD 123
           ++  +   AD +TDEV+A++ L P++  E   +D  +    G    +PT+ F KTLT SD
Sbjct: 70  RVSAIKFLADPDTDEVFAKLRLIPINGSELDFEDDGIGRLNGSEQDKPTS-FAKTLTQSD 128

Query: 124 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 183
            +  GGFSVPR  AE +FP LD+S  PP Q ++A+D+H   WKFRHI+RG P+RHLLTTG
Sbjct: 129 ANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRGTPRRHLLTTG 188

Query: 184 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSD------SMHIGL 237
           WS FV+ K+LVAGDS++F+  E   L +GIRRA R     P S    +      ++  G 
Sbjct: 189 WSTFVNHKKLVAGDSIVFLRAENGDLCVGIRRAKRGIGDGPESSCGWNPAGGNCAVSYGA 248

Query: 238 LAA-----------------------------------AAHAAATNSCFTVFFNPRASPS 262
            +A                                   AA  A+    F + F PRAS  
Sbjct: 249 FSAFLREDDNRLTRSANGMNGNGSLMGKGKVKPESVTEAAKLASNGQPFEIIFYPRASTP 308

Query: 263 EFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWR 321
           EF +     VKA    R   GMRF+M FETE+SS +  +MGTI  +   DP+RW  S WR
Sbjct: 309 EFCVK-AALVKAALQIRWCSGMRFKMAFETEDSSRISWFMGTINSVQVSDPLRWPESPWR 367

Query: 322 SVKVGWDESTAGERQPRVSLWEIEPLTTF-PMYPSLFP---LRLKRPWHP 367
            ++V WDE    +   RVS W +E +++  P++ + F     + + P HP
Sbjct: 368 LLQVTWDEPDLLQNVKRVSPWLVELVSSMSPIHLAPFSPPRKKFRYPQHP 417


>gi|224097892|ref|XP_002311089.1| predicted protein [Populus trichocarpa]
 gi|222850909|gb|EEE88456.1| predicted protein [Populus trichocarpa]
          Length = 671

 Score =  273 bits (698), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 160/402 (39%), Positives = 218/402 (54%), Gaps = 53/402 (13%)

Query: 6   KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 65
           KCL+S+LWHACAG +V +P V ++V YFPQGH+E    + +         +  +P  + C
Sbjct: 6   KCLDSQLWHACAGSMVQMPAVNSKVFYFPQGHAEHAQGSVDF-------GHFQIPALIPC 58

Query: 66  QLHNVTMHADVETDEVYAQMTLQPLSPE---------EQKDTFVPIELGIPSKQPTNYFC 116
           ++  +   A+ ETDEVYA++ L P S           E  D  +P   GI S++    F 
Sbjct: 59  KVSAIKYMAEPETDEVYAKIRLTPSSNSDLMFGDGCGEDSDDRLPN--GIESQEKPASFA 116

Query: 117 KTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPK 176
           KTLT SD +  GGFSVPR  AE +FP LD++ +PP Q ++A+D+H   WKFRHI+RG P+
Sbjct: 117 KTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTILAKDVHGETWKFRHIYRGTPR 176

Query: 177 RHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR--PPTVMPSSVLSSDSMH 234
           RHLLTTGWS FV+ K+LVAGDS++F+  E   L +GIRRA R        SS  +S   +
Sbjct: 177 RHLLTTGWSNFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKRGIGGGNECSSGWNSFGGY 236

Query: 235 IGLL-------------------------AAAAHAAATNSCFTVFFNPRASPSEFVIPLT 269
            G L                           AA  AA    F V + PRAS  EF +  +
Sbjct: 237 SGFLREDESKLTRRNGNGDMKGKVKPESVIEAASLAANGQPFEVVYYPRASTPEFCVRAS 296

Query: 270 KYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVGWD 328
             V+   H +   GMRF+M FETE+SS +  +MGTI+ +   DP+RW NS WR ++V WD
Sbjct: 297 A-VRTAMHIQWCPGMRFKMAFETEDSSRISWFMGTISSVQFADPIRWPNSPWRLLQVAWD 355

Query: 329 ESTAGERQPRVSLWEIEPLTTFPMY------PSLFPLRLKRP 364
           E    +   RVS W  E ++  P        P    LRL +P
Sbjct: 356 EPDLLQNVKRVSPWLAELVSNMPAIHLSPFSPPRKKLRLPQP 397



 Score = 42.0 bits (97), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 6/80 (7%)

Query: 682 VKVY-KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 740
            KV+ +S  +GR+LD+S   SY EL  +L  MFGIE      + S   +++ D       
Sbjct: 588 CKVFLESEDIGRTLDLSVLGSYEELHRKLASMFGIE---SSEMLS--NVLYRDAAGATKH 642

Query: 741 LGDDPWEAFVSNVWYIKILS 760
            GD+P+  F+     + ILS
Sbjct: 643 AGDEPFSEFLKTARRLTILS 662


>gi|225449038|ref|XP_002273590.1| PREDICTED: auxin response factor 18 [Vitis vinifera]
          Length = 683

 Score =  273 bits (697), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 152/386 (39%), Positives = 213/386 (55%), Gaps = 47/386 (12%)

Query: 5   NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLI 64
           +KCL+ +LWHACAG +V +P++ +RVVYFPQGH+E      +          P +PP ++
Sbjct: 12  DKCLDPQLWHACAGGMVHMPSLNSRVVYFPQGHAEHAYGNVDF-------GNPRIPPLVL 64

Query: 65  CQLHNVTMHADVETDEVYAQMTLQPL--SPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           C++  V   AD E+DEVYA++ L PL  +  E +D  +    GI + +    F KTLT S
Sbjct: 65  CRVSAVKYLADPESDEVYAKIRLIPLRNTEGETEDDVLMGGNGIEAPEKPASFAKTLTQS 124

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           D +  GGFSVPR  AE +FP LD+S  PP Q ++A+D+H   W+FRHI+RG P+RHLLTT
Sbjct: 125 DANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWRFRHIYRGTPRRHLLTT 184

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRP-------------------PTVM 223
           GWS FV+ K LVAGDS++F+  E   L +GIRRA R                    P   
Sbjct: 185 GWSNFVNKKNLVAGDSIVFLRAENGDLCVGIRRAKRAGCGPESPSGWNPASGNGTSPYRG 244

Query: 224 PSSVLSSDSMHIGL-----------------LAAAAHAAATNSCFTVFFNPRASPSEFVI 266
            S  L  D     L                 +A AA  AA    F + + PRAS  EF +
Sbjct: 245 YSGFLREDENRPILTHSNAGFRGKGRVRAESVAEAATLAANGQPFVIVYYPRASTPEFCV 304

Query: 267 PLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKV 325
             +  V+A    +   GM+F+M FET++SS +  +MG I+ +   DP+RW NS WR ++V
Sbjct: 305 KASS-VRAAMQIQWCPGMKFKMAFETDDSSRISWFMGNISSVHVNDPIRWPNSPWRLLQV 363

Query: 326 GWDESTAGERQPRVSLWEIEPLTTFP 351
            WDE    +   RV+ W +E ++  P
Sbjct: 364 TWDEPDLLQNVKRVNPWLVELVSHVP 389


>gi|357140673|ref|XP_003571888.1| PREDICTED: auxin response factor 22-like [Brachypodium distachyon]
          Length = 705

 Score =  273 bits (697), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 159/408 (38%), Positives = 220/408 (53%), Gaps = 46/408 (11%)

Query: 2   IGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNY-PNLP 60
           +G+ +CL+ +LWHACAG +V +P   +RV YFPQGH+E   +              P L 
Sbjct: 23  VGEERCLDPQLWHACAGGMVQMPPARSRVYYFPQGHAEHANSGGGGAAAELAATVGPRLL 82

Query: 61  PQLI-CQLHNVTMHADVETDEVYAQMTLQPLSPEE----QKDTFVPIELGIPSKQPTNYF 115
           P L+ C +  V   AD ETDEV+A++ L P+ P+E    + +   P+E    +++    F
Sbjct: 83  PALVLCSVAGVRFLADPETDEVFAKIRLVPVGPDEVAFREPEGLGPLE--AEAQEKLASF 140

Query: 116 CKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQP 175
            KTLT SD +  GGFSVPR  AE +FP LD+   PP Q ++A+D+H   WKFRHI+RG P
Sbjct: 141 AKTLTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIYRGTP 200

Query: 176 KRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR-------------PPTV 222
           +RHLLTTGWS FV+ K+LVAGDS++F+  E  +L +GIRRA R              P  
Sbjct: 201 RRHLLTTGWSTFVNQKKLVAGDSIVFLRTEHGELCVGIRRAKRVTCGGMECVSGWNAPGY 260

Query: 223 MPSSVLSSD-----------------SMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFV 265
              S    D                  + I  +  AA  AA    F V + PRAS  EFV
Sbjct: 261 GGFSAFLKDEENKMMNSTGGYLKGRGKLKIADVVEAASLAANGQPFEVVYYPRASTPEFV 320

Query: 266 IPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVK 324
           +     ++A        GMRF+M FETE+SS +  +MGTI+ +   DP+RW NS WR ++
Sbjct: 321 VKAAS-MQAAMRIHWCPGMRFKMAFETEDSSRISWFMGTISSVQVADPIRWPNSPWRLLQ 379

Query: 325 VGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL-----RLKRPWHP 367
           V WDE    +    VS W +E +++ P    L P      +L+ P HP
Sbjct: 380 VSWDEPDLLQNVKCVSPWLVELVSSIPPI-HLGPFSPPRKKLRVPQHP 426


>gi|300373061|gb|ADG43151.1| auxin response factor 17 [Zea mays]
 gi|413934018|gb|AFW68569.1| hypothetical protein ZEAMMB73_208127 [Zea mays]
          Length = 644

 Score =  272 bits (696), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 156/383 (40%), Positives = 211/383 (55%), Gaps = 37/383 (9%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ +CL+ +LWHACAG +V +P V +RV YFPQGH+E  A       D        LPP 
Sbjct: 5   GEERCLDPQLWHACAGGMVQMPPVRSRVYYFPQGHAEH-AHGGGGATDLAGARARPLPPL 63

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP---SKQPTNYFCKTL 119
           ++C +  V   AD ETDEV+A++ L P +P E  +   P E GI    +++  + F KTL
Sbjct: 64  VLCTVAGVRFLADPETDEVFAKIRLVPAAPGEV-EFGEPREFGIDPEDAREKLSSFAKTL 122

Query: 120 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 179
           T SD +  GGFSVPR  AE +FP LD+   PP Q ++A+D+H   WKFRHIFRG P+RHL
Sbjct: 123 TQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIFRGTPRRHL 182

Query: 180 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR-------------PPTVMPSS 226
           LTTGWS FV+ K+LVAGDS++F+  E  +L +GIRRA R              P     S
Sbjct: 183 LTTGWSAFVNQKKLVAGDSIVFLRTEHGELCVGIRRAKRVSCGGMECISGWNAPVYGALS 242

Query: 227 VLSSD-----------------SMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLT 269
               D                  + I  +  AA  AA+   F V + PRAS  EFV+   
Sbjct: 243 AFLKDEEGKITKGPGGYMRGRGKVEITDVVEAASLAASGQPFEVVYYPRASTPEFVVKAA 302

Query: 270 KYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVGWD 328
             V+     +   GMRF+M FETE+SS +  +MGTI      D +RW NS WR ++V WD
Sbjct: 303 S-VQNAMRNQWCPGMRFKMAFETEDSSRISWFMGTIASAQVADTIRWPNSPWRLLQVSWD 361

Query: 329 ESTAGERQPRVSLWEIEPLTTFP 351
           E    +    V+ W +E +++ P
Sbjct: 362 EPDLLQNVKCVNPWLVEIVSSIP 384


>gi|291196865|emb|CAX63113.1| ETTIN protein [Cabomba aquatica]
          Length = 744

 Score =  272 bits (695), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 145/317 (45%), Positives = 198/317 (62%), Gaps = 18/317 (5%)

Query: 62  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIEL-----------GIPSKQ 110
           Q+IC++ +V + A+V  DE+YAQ++L         D  V   L           GI    
Sbjct: 1   QIICRVVDVKLQAEVSNDELYAQVSLLAEDEVGFLDESVVRSLNGGEEVSEENQGIRRTI 60

Query: 111 PTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHI 170
           P + FCKTLTASDTSTHGGFSVPRRAAE  FP LD+S Q P+QEL A+DL+   W+FRHI
Sbjct: 61  P-HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELTAKDLYGFIWRFRHI 119

Query: 171 FRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR-PPTVMPSSVLS 229
           +RGQP+RHLLTTGWS F + K+L  GD+VLF+  +  +L LGIRRA R     +P + L 
Sbjct: 120 YRGQPRRHLLTTGWSSFANKKKLKPGDAVLFLRVDDGELRLGIRRATRQSQCCVPYTGLL 179

Query: 230 SDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRML 289
                + +L+  A A +    F +++NPRASP+EF++P  KY+++  H   S+GMR ++ 
Sbjct: 180 CQLSRVNMLSMVADALSVKKLFHIYYNPRASPAEFMVPYWKYLRSCSHP-FSMGMRLKIR 238

Query: 290 FETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT 349
            ETE++  +RY G ITG+ D+DP+RW NS WR + V WD++       RVS WEIE  + 
Sbjct: 239 VETEDAVEKRYTGHITGVGDVDPIRWPNSKWRCLVVRWDDNADTCLHDRVSPWEIEQSSL 298

Query: 350 FPMYPSLFPLR--LKRP 364
              +   FPL+   KRP
Sbjct: 299 VSSFS--FPLKSTSKRP 313



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 37/88 (42%), Positives = 58/88 (65%), Gaps = 2/88 (2%)

Query: 678 TRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           TR   KVYK  S VGR++D+++ + Y++L  EL ++  +EG   DP R GWQ+V+ D  +
Sbjct: 637 TRRCTKVYKQESLVGRAVDLTKLTGYDDLIFELERLLDMEGLLRDP-RKGWQVVYTDNVS 695

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPEDV 764
           D++L+GD+PW+ F   V  I I + E+V
Sbjct: 696 DMMLVGDEPWQEFCDIVSKIHIFTREEV 723


>gi|356533969|ref|XP_003535530.1| PREDICTED: auxin response factor 18-like [Glycine max]
          Length = 608

 Score =  272 bits (695), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 152/388 (39%), Positives = 211/388 (54%), Gaps = 44/388 (11%)

Query: 6   KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 65
           +CL+S+LWHACAG +V +P + T+V YFPQGH+E           +H      +PP + C
Sbjct: 6   RCLDSQLWHACAGAMVQMPPLNTKVFYFPQGHAEHAHGKVEYFGKNH---QTRVPPLIPC 62

Query: 66  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPS-------KQPTNYFCKT 118
           +L  +   AD +TDEVY +M L PL   E  D+     LG  +       ++P   F KT
Sbjct: 63  RLSAMKYMADPDTDEVYVKMRLTPLREHELLDSQDDCFLGNTNSGGVENQEKPPTSFAKT 122

Query: 119 LTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRH 178
           LT SD +  GGFSVPR  AE +FP LD+S +PP Q +IA+D+H   WKFRHI+RG P+RH
Sbjct: 123 LTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMHGQCWKFRHIYRGTPRRH 182

Query: 179 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR-------------------- 218
           LLTTGWS FV+ KRLVAGDS++F+  E   L +GIRRA +                    
Sbjct: 183 LLTTGWSNFVNQKRLVAGDSIVFLRAENGDLCVGIRRAKKGIGGGTEFSSGWNNPLFGGG 242

Query: 219 -------PPTVMPSSVLSSDSMHIGLLA-----AAAHAAATNSCFTVFFNPRASPSEFVI 266
                    + +  +    D   +G +A      A   A     F V + PRAS  EF +
Sbjct: 243 GGFLCGSESSFVSGAKSGGDHEIVGRVAPESVVEAVTCAVNGRPFEVVYYPRASSPEFCV 302

Query: 267 PLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKV 325
             +  VKA    +   GMRF+M FETE+SS +  +MGTI+ +   DP+RW +S WR ++V
Sbjct: 303 KAS-VVKAAMQIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVADPIRWPDSPWRLLQV 361

Query: 326 GWDESTAGERQPRVSLWEIEPLTTFPMY 353
            WDE    +    V+ W +E ++  P +
Sbjct: 362 VWDEPDLLQNVKCVNPWLVELVSNMPTF 389


>gi|357443233|ref|XP_003591894.1| Auxin response factor [Medicago truncatula]
 gi|355480942|gb|AES62145.1| Auxin response factor [Medicago truncatula]
          Length = 619

 Score =  272 bits (695), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 152/386 (39%), Positives = 216/386 (55%), Gaps = 47/386 (12%)

Query: 6   KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 65
           KCL+S+LWHACAG +V +P + T+V YFPQGH+E      + +VD    +   +PP + C
Sbjct: 14  KCLDSQLWHACAGAMVQMPPLNTKVFYFPQGHAEHA----HNKVDF---SKTRVPPLIPC 66

Query: 66  QLHNVTMHADVETDEVYAQMTLQPLSPEE---QKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           ++  +   AD ETDEVY +M L PL   E   ++D F     G+ S++    F KTLT S
Sbjct: 67  RISAMKYMADPETDEVYVKMKLTPLRENELDFEEDCFFGNN-GLESQEKPASFAKTLTQS 125

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           D +  GGFSVPR  AE +FP LD+S +PP Q +IA+D+H   WKFRHI+RG P+RHLLTT
Sbjct: 126 DANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMHGQCWKFRHIYRGTPRRHLLTT 185

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPT--------------------- 221
           GWS FV+ K+LVAGDS++F+  E   L +GIRRA +                        
Sbjct: 186 GWSNFVNHKKLVAGDSIVFLRAENGDLCVGIRRAKKGGIGGGTDQFSNSSSTWNRVSPLF 245

Query: 222 --VMPSSVLSSDSMHIGL-----------LAAAAHAAATNSCFTVFFNPRASPSEFVIPL 268
             V    +  +D+   G            +  A + A     F V + PRAS  EF + +
Sbjct: 246 GGVGSGFLCGNDNRKNGCDDLMGKVGAESVVEAVNCAVNGRSFEVVYYPRASTPEFCVKV 305

Query: 269 TKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVGW 327
           +  VK+    +   GMRF+M FETE+SS +  +MGTI+ +   DP+RW +S WR ++V W
Sbjct: 306 SS-VKSAMQIQWCSGMRFKMPFETEDSSRISWFMGTISSVHVQDPIRWPDSPWRLLQVVW 364

Query: 328 DESTAGERQPRVSLWEIEPLTTFPMY 353
           DE    +    V+ W +E ++  P +
Sbjct: 365 DEPDLLQNVKCVNPWLVELVSNMPNF 390


>gi|356574605|ref|XP_003555436.1| PREDICTED: auxin response factor 18-like [Glycine max]
          Length = 589

 Score =  272 bits (695), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 158/386 (40%), Positives = 214/386 (55%), Gaps = 43/386 (11%)

Query: 6   KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 65
           +CL+S+LWHACAG +V +P + T+V YFPQGH+E       K VD    N   +PP + C
Sbjct: 6   RCLDSQLWHACAGAMVQMPPLNTKVFYFPQGHAEHAHG---KRVD-FPKNQTRVPPLIPC 61

Query: 66  QLHNVTMHADVETDEVYAQMTLQPLSPEE----QKDTFVPIELGIPS-----KQPTNYFC 116
           +L  +   AD +TDEVY +M L PL   E    Q D F+    G        ++P   F 
Sbjct: 62  RLSAMKYMADPDTDEVYVKMRLTPLREHELLDSQDDCFLGNSAGGGGVDQGQEKPPTSFA 121

Query: 117 KTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPK 176
           KTLT SD +  GGFSVPR  AE +FP LD+S +PP Q +IA+D+    WKFRHI+RG P+
Sbjct: 122 KTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMLGQCWKFRHIYRGTPR 181

Query: 177 RHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRP--------------PTV 222
           RHLLTTGWS FV+ KRLVAGDS++F+  E   L +GIRRA +               P  
Sbjct: 182 RHLLTTGWSNFVNQKRLVAGDSIVFLRAENGDLCVGIRRAKKGIGGGTEFSSGGWNNPLF 241

Query: 223 MPSSVLSSDS---------MHIGLLAA-----AAHAAATNSCFTVFFNPRASPSEFVIPL 268
               +  S+S         M +G +AA     A   A     F V + PRAS  EF +  
Sbjct: 242 GGGFLCGSESNLMSGGDHEMLVGRVAAESVVEAVTCAVNGRPFEVVYYPRASSPEFCVKA 301

Query: 269 TKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVGW 327
           +  VKA    +   GMRF+M FETE+SS +  +MGTI+ +   DP+ W +S WR ++V W
Sbjct: 302 S-VVKAAMQIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVADPILWPDSPWRLLQVVW 360

Query: 328 DESTAGERQPRVSLWEIEPLTTFPMY 353
           DE    +    V+ W +E ++  P +
Sbjct: 361 DEPDLLQNVKCVNPWLVELVSNMPTF 386


>gi|379323246|gb|AFD01322.1| auxin response factor 27 [Brassica rapa subsp. pekinensis]
          Length = 541

 Score =  271 bits (694), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 140/348 (40%), Positives = 206/348 (59%), Gaps = 16/348 (4%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G N+ L  +LW  CAGPL  LP +G  V YFPQG+ EQ+ A+ N  +    P + ++  +
Sbjct: 18  GVNRYLYDQLWKLCAGPLFDLPKIGEEVYYFPQGNIEQLVASANDNLCQLKPIF-DISSR 76

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPS---KQPTNYFCKTL 119
           + C + ++ +  +  TDEVYA+++L P SPE        +E+  P+   +Q   YF K L
Sbjct: 77  IHCNVISIKLKVETNTDEVYAKVSLLPCSPE--------VEITFPNDNNEQNIKYFTKVL 128

Query: 120 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 179
           TASD   HG F + ++ A +  P LD S   P+QE++A+DLHD  WKF+H FRG PKRHL
Sbjct: 129 TASDIGPHGDFILFKKDAIECLPPLDMSQLIPSQEIVAKDLHDHVWKFKHTFRGTPKRHL 188

Query: 180 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLA 239
            T+GW  FV  K L  GDS +F+  E  +  +GIR+     + M SSV+S +SMH G +A
Sbjct: 189 FTSGWKEFVKGKSLAVGDSFVFLRGENGESRVGIRKTSHQQSDMSSSVISKESMHHGFIA 248

Query: 240 AAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRR 299
           +A++A  T   F VF+ P++  S+F++   K++ AV + + +   RF M FE  + +   
Sbjct: 249 SASNAIHTKCMFDVFYKPKS--SKFIVNCDKFLDAV-NMKFNTSSRFTMKFEGHDFNEII 305

Query: 300 YMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 347
           Y GTI  + D   + W  S WR+++V WDE+    R  +VSLWEIEPL
Sbjct: 306 YSGTIVKMEDF-SIYWKGSEWRNLQVQWDEAATIPRPNKVSLWEIEPL 352



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/90 (41%), Positives = 54/90 (60%), Gaps = 3/90 (3%)

Query: 671 QIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLV 730
           Q  +L+ T +  KV+  G V R++D++ F  YN +  EL ++F IEGK    + S W+L 
Sbjct: 454 QRKELSFTTSSTKVHMEG-VTRTVDLTVFDGYNHMIVELEKLFNIEGKLH--MHSQWKLT 510

Query: 731 FVDRENDVLLLGDDPWEAFVSNVWYIKILS 760
           F D E D++L+GDDPW  F + V  I I S
Sbjct: 511 FKDHEGDMMLVGDDPWPKFCNIVKEIVISS 540


>gi|36939190|gb|AAQ86959.1| ETTIN-like auxin response factor [Triticum aestivum]
          Length = 632

 Score =  271 bits (694), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 143/307 (46%), Positives = 192/307 (62%), Gaps = 16/307 (5%)

Query: 52  HIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIE-------- 103
           H+     +PP + C++ +V + AD  TDEVYAQ++L  +  EE K      E        
Sbjct: 25  HLTAVAAVPPHVFCRVVDVNLQADPATDEVYAQVSLL-VDNEEAKRRMRQGESEEACDGD 83

Query: 104 ---LGIPSKQPT--NYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIAR 158
               G   ++    + FCKTLTASDTSTHGGFSVPRRAAE  FP LD++LQ P+QEL+A+
Sbjct: 84  GEDTGAAKRRARMPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYNLQRPSQELVAK 143

Query: 159 DLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR 218
           DLH  EW+FRHI+RGQP+RHLLTTGWS FV+ K+LV+GD+VLF+  E   L LG+RRA +
Sbjct: 144 DLHGTEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGVLQLGVRRAAQ 203

Query: 219 PPTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHT 278
              V P   L +    +  L   AHA A  S F +++NPR   SEF++P  K++++ F  
Sbjct: 204 LKNVSPFPALFNQDSSLRSLGNVAHAVAMKSIFHIYYNPRLCESEFIVPYWKFMRS-FSQ 262

Query: 279 RVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPR 338
             SVGMRF+M +E E++S RR  G ITG  + D ++   S W+ + V WD+     R  R
Sbjct: 263 PFSVGMRFKMKYENEDASERRSTGMITGSRESD-LKSHGSKWKCLVVRWDDDVECRRLNR 321

Query: 339 VSLWEIE 345
           VS WEIE
Sbjct: 322 VSPWEIE 328


>gi|350537209|ref|NP_001234796.1| auxin response factor 10 [Solanum lycopersicum]
 gi|300676100|gb|ADK26472.1| auxin response factor 10 [Solanum lycopersicum]
          Length = 699

 Score =  271 bits (693), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 156/386 (40%), Positives = 215/386 (55%), Gaps = 47/386 (12%)

Query: 6   KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVD-SHIPNYPNLPPQLI 64
           KC++S+LWHACAG +V +P V ++V YFPQGH+E     T   VD S +P  P L   ++
Sbjct: 7   KCVDSQLWHACAGGMVQIPPVNSKVYYFPQGHAEH----TLMNVDFSALPRSPAL---IL 59

Query: 65  CQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGI---PSKQPTNYFCKTLTA 121
           C++  V   AD ETDEVYA++ + P+  +          LG     + +  N F KTLT 
Sbjct: 60  CRVAAVKFLADPETDEVYAKIRVVPVGNKGNDFDDDDDILGSNESGTAEKPNSFAKTLTQ 119

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SD +  GGFSVPR  AE +FP LD++  PP Q + A+D+H   WKFRHI+RG P+RHLLT
Sbjct: 120 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVTAKDVHGESWKFRHIYRGTPRRHLLT 179

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMP----------------S 225
           TGWS FV+ K+LVAGDS++F+  E  +L +GIRRA R     P                S
Sbjct: 180 TGWSSFVNQKKLVAGDSIVFLRAENGELCVGIRRAKRGGIGGPEAPSGWNSGAGNYGGFS 239

Query: 226 SVLSSDSMHIGLLAA------------------AAHAAATNSCFTVFFNPRASPSEFVIP 267
           + L  +    G L +                  AAH A++   F V + PRA+  EF + 
Sbjct: 240 AFLREEMSKNGNLTSPTRSLRGKGRVRPESVVEAAHLASSGQPFEVVYYPRANTPEFCVR 299

Query: 268 LTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVG 326
            +  V A    +   GMRF+M FETE+SS +  +MGTI+ I   DP+RW NS WR ++V 
Sbjct: 300 ASS-VNAAMRIQWCSGMRFKMAFETEDSSRISWFMGTISSIQLADPIRWPNSPWRLLQVA 358

Query: 327 WDESTAGERQPRVSLWEIEPLTTFPM 352
           WDE    +    VS W +E ++  P+
Sbjct: 359 WDEPDLLQNVKHVSPWLVELVSNMPV 384



 Score = 42.7 bits (99), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 6/79 (7%)

Query: 682 VKVY-KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 740
            KV+ +S  VGR+LD+S   SY EL + L  MFG+E    D L    ++++ D    V  
Sbjct: 591 CKVFLESEDVGRTLDLSVMGSYEELYKRLANMFGLER--PDMLT---RVLYHDATGAVKH 645

Query: 741 LGDDPWEAFVSNVWYIKIL 759
            GD+P+  FV +   + IL
Sbjct: 646 TGDEPFSDFVKSAKRLTIL 664


>gi|400269944|gb|AFP74909.1| auxin response factor 10 [Brassica napus]
          Length = 704

 Score =  271 bits (693), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 155/396 (39%), Positives = 213/396 (53%), Gaps = 59/396 (14%)

Query: 6   KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 65
           + L+ +LWHACAG +V +P++ + V YFPQGH+E   A      D H P    +PP ++C
Sbjct: 5   RSLDPQLWHACAGSMVQIPSLNSTVFYFPQGHAEHAHAPP----DFHAPR---VPPLILC 57

Query: 66  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTN------YFCKTL 119
           +L +V   AD ETDEVY+++TL PL P    D      LG+      N       F KTL
Sbjct: 58  RLASVKFLADAETDEVYSKITLLPL-PGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTL 116

Query: 120 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 179
           T SD +  GGFSVPR  AE +FP LD++ +PP Q +IA+D+H   WKFRHI+RG P+RHL
Sbjct: 117 TQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGKTWKFRHIYRGTPRRHL 176

Query: 180 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR--------------PPTVMPS 225
           LTTGWS FV+ K+L+AGDS++F+ +E   L +GIRRA R               P    S
Sbjct: 177 LTTGWSTFVNQKKLIAGDSIVFLRSETGDLCVGIRRAKRGGLGSNGDNNSNSNNPYPGFS 236

Query: 226 SVLSSDSMHIGLL--------AAAAHAAATNS---------------------CFTVFFN 256
             L  D +    L            +A   N+                      F V + 
Sbjct: 237 GFLRDDEITTSKLMMMKRNATGGGGNANDANAPGGRVRVEAVAEAVARAACGQAFEVVYY 296

Query: 257 PRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRW 315
           PRAS  EF +  +  V++    R   GMRF+M FETE+SS +  +MGT++ +   DP+RW
Sbjct: 297 PRASTPEFCVKASD-VRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRW 355

Query: 316 SNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 351
            NS WR ++V WDE    +   RVS W +E ++  P
Sbjct: 356 PNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMP 391



 Score = 47.4 bits (111), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 59/111 (53%), Gaps = 16/111 (14%)

Query: 682 VKVY-KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 740
            KV+ +S  VGR+LD+S   SY EL  +L +MFGIE +  D L     +V+ D       
Sbjct: 594 CKVFMESEDVGRTLDLSVIGSYQELYRKLAEMFGIEER-SDLLT---HVVYRDANGVTKR 649

Query: 741 LGDDPWEAFVSNVWYIKI---LSPEDVQKM-------GEQGVESFSPSSGQ 781
           +GD+P+  F+     + I   +S ++V+K        GE G++S S  +GQ
Sbjct: 650 IGDEPFSDFMRATKRLTIKMDISGDNVRKTWITGIRNGENGIDS-STKTGQ 699


>gi|302797807|ref|XP_002980664.1| hypothetical protein SELMODRAFT_444549 [Selaginella moellendorffii]
 gi|300151670|gb|EFJ18315.1| hypothetical protein SELMODRAFT_444549 [Selaginella moellendorffii]
          Length = 793

 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 157/413 (38%), Positives = 226/413 (54%), Gaps = 67/413 (16%)

Query: 6   KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPN-LPPQ-- 62
           K L+ +LW ACAG +V LPTVG++++YFPQGH+EQ A++         P++P  L P   
Sbjct: 36  KHLDQQLWQACAGSMVQLPTVGSKIIYFPQGHAEQAASS---------PDFPRALGPAGT 86

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           + C++ +V   AD ETDEV+A + L P S  ++ +         PS +    F KTLT S
Sbjct: 87  VPCRVLSVKFLADKETDEVFASLRLHPESGSDEDNDRAAAP--SPSPEKPASFAKTLTQS 144

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           D +  GGFSVPR  AE +FP LD+S+ PP Q ++A+D+H   WKFRHI+RG P+RHLLTT
Sbjct: 145 DANNGGGFSVPRYCAETIFPRLDYSVDPPVQTVLAKDVHGEVWKFRHIYRGTPRRHLLTT 204

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA-------------------------- 216
           GWS FV+ K+LVAGD+++F+ +   +L +G+RR+                          
Sbjct: 205 GWSTFVNHKKLVAGDAIVFLRSNSGELCVGVRRSMRGGGSGNADALLWHSASSRSSSRWE 264

Query: 217 IRPP--------TVM-----------------PSSVLSSDSMHIGLLAAAAHAAATNSCF 251
           +RPP        T+M                  S   +   +    +  AA  AA+   F
Sbjct: 265 LRPPMDTGLSDGTLMRENGSSRSAGGGAGNGGGSFTRNRAKVTAKSVLDAATLAASGKAF 324

Query: 252 TVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDL 310
            V + PRAS +EF +   + V+A        GMRF+M FETE+SS +  +MGTI+ +   
Sbjct: 325 EVVYYPRASTAEFCV-RAQTVRAALSHGWYAGMRFKMAFETEDSSRISWFMGTISAVQAA 383

Query: 311 DPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKR 363
           DP+ W +S WR ++V WDE    +   RVS W++E ++T PM    F L  KR
Sbjct: 384 DPILWPSSPWRVLQVAWDEPDLLQGVSRVSPWQVELVSTLPMQLPPFSLPRKR 436


>gi|449464378|ref|XP_004149906.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
 gi|449490399|ref|XP_004158594.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
          Length = 703

 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 160/407 (39%), Positives = 228/407 (56%), Gaps = 50/407 (12%)

Query: 1   MIGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLP 60
           M+  +K L+S+LWHACAG L+ LPT+ ++VVYFPQGH+E         VD      P++ 
Sbjct: 8   MMNHDKHLDSQLWHACAGGLIQLPTINSKVVYFPQGHTEHAQGN----VDFGNARIPSII 63

Query: 61  PQLICQLHNVTMHADVETDEVYAQMTLQPLSPEE-----QKDTFVPIELGIPSKQPTNYF 115
           P   C++  +   AD ETDEV+A++ L PL+  E     + D  +  EL    K PT+ F
Sbjct: 64  P---CRVSGIRHMADPETDEVFAKIKLSPLANNEFNLDNEDDLLIHNELKSQDK-PTS-F 118

Query: 116 CKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQP 175
            KTLT SD +  GGFSVPR  AE +FP LD+S++PP Q ++A+D+H   WKFRHI+RG P
Sbjct: 119 AKTLTQSDANNGGGFSVPRYCAETIFPRLDYSVEPPVQTILAKDVHGEIWKFRHIYRGTP 178

Query: 176 KRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRP------------PTVM 223
           +RHLLTTGWS FV+ K+LVAGDS++F+  E   L +G+RRA R             PT  
Sbjct: 179 RRHLLTTGWSSFVNQKKLVAGDSIVFLRAETGDLCIGVRRAKRGIGCGIDYSPGWNPTNS 238

Query: 224 PSSVLS-SDSMH--------------------IGLLAAAAHAAATNSCFTVFFNPRASPS 262
            SS++  SD M                     +  +  AA  AA+   F + + P A   
Sbjct: 239 GSSLVGYSDYMRESEGRLGRRNSNGNLSGRVKVESVIEAAMLAASGQSFEIVYYPCAGTP 298

Query: 263 EFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWR 321
           EFV+  +  +++         MRF+M FETE+SS +  +MGT++ I   DP+RW +S WR
Sbjct: 299 EFVVKASS-LRSAMQIHWYSAMRFKMPFETEDSSRISWFMGTVSSIQAADPIRWPDSPWR 357

Query: 322 SVKVGWDESTAGERQPRVSLWEIEPLTTFP-MYPSLFPLRLKRPWHP 367
            ++V WDE    +    V+ W +E +   P ++ S F    K+P  P
Sbjct: 358 MLQVTWDEPDLLQNVKSVNPWLVEVVVNMPAIHVSPFSPPRKKPRFP 404


>gi|400269967|gb|AFP74918.1| auxin response factor 10 [Brassica napus]
          Length = 706

 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 155/396 (39%), Positives = 213/396 (53%), Gaps = 59/396 (14%)

Query: 6   KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 65
           + L+ +LWHACAG +V +P++ + V YFPQGH+E   A      D H P    +PP ++C
Sbjct: 5   RSLDPQLWHACAGSMVQIPSLNSTVFYFPQGHAEHAHAPP----DFHAPR---VPPLILC 57

Query: 66  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTN------YFCKTL 119
           +L +V   AD ETDEVY+++TL PL P    D      LG+      N       F KTL
Sbjct: 58  RLASVKFLADAETDEVYSKITLLPL-PGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTL 116

Query: 120 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 179
           T SD +  GGFSVPR  AE +FP LD++ +PP Q +IA+D+H   WKFRHI+RG P+RHL
Sbjct: 117 TQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGKTWKFRHIYRGTPRRHL 176

Query: 180 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR--------------PPTVMPS 225
           LTTGWS FV+ K+L+AGDS++F+ +E   L +GIRRA R               P    S
Sbjct: 177 LTTGWSTFVNQKKLIAGDSIVFLRSETGDLCVGIRRAKRGGLGSNGDNNSNSNNPYPGFS 236

Query: 226 SVLSSDSMHIGLL--------AAAAHAAATNS---------------------CFTVFFN 256
             L  D +    L            +A   N+                      F V + 
Sbjct: 237 GFLRDDEITTSKLMMMKRNATGGGGNANDANAPGGRVRVEAVAEAVARAACGQAFEVVYY 296

Query: 257 PRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRW 315
           PRAS  EF +  +  V++    R   GMRF+M FETE+SS +  +MGT++ +   DP+RW
Sbjct: 297 PRASTPEFCVKASD-VRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRW 355

Query: 316 SNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 351
            NS WR ++V WDE    +   RVS W +E ++  P
Sbjct: 356 PNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMP 391



 Score = 47.0 bits (110), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 59/111 (53%), Gaps = 16/111 (14%)

Query: 682 VKVY-KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 740
            KV+ +S  VGR+LD+S   SY EL  +L +MFGIE +  D L     +V+ D       
Sbjct: 596 CKVFMESEDVGRTLDLSVIGSYQELYRKLAEMFGIEER-SDLLT---HVVYRDANGVTKR 651

Query: 741 LGDDPWEAFVSNVWYIKI---LSPEDVQKM-------GEQGVESFSPSSGQ 781
           +GD+P+  F+     + I   +S ++V+K        GE G++S S  +GQ
Sbjct: 652 IGDEPFSDFMRATKRLTIKMDISGDNVRKTWITGIRNGENGIDS-STKTGQ 701


>gi|400269965|gb|AFP74917.1| auxin response factor 10 [Brassica napus]
          Length = 705

 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 155/396 (39%), Positives = 213/396 (53%), Gaps = 59/396 (14%)

Query: 6   KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 65
           + L+ +LWHACAG +V +P++ + V YFPQGH+E   A      D H P    +PP ++C
Sbjct: 5   RSLDPQLWHACAGSMVQIPSLNSTVFYFPQGHAEHAHAPP----DFHAPR---VPPLILC 57

Query: 66  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTN------YFCKTL 119
           +L +V   AD ETDEVY+++TL PL P    D      LG+      N       F KTL
Sbjct: 58  RLASVKFLADAETDEVYSKITLLPL-PGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTL 116

Query: 120 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 179
           T SD +  GGFSVPR  AE +FP LD++ +PP Q +IA+D+H   WKFRHI+RG P+RHL
Sbjct: 117 TQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGKTWKFRHIYRGTPRRHL 176

Query: 180 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR--------------PPTVMPS 225
           LTTGWS FV+ K+L+AGDS++F+ +E   L +GIRRA R               P    S
Sbjct: 177 LTTGWSTFVNQKKLIAGDSIVFLRSETGDLCVGIRRAKRGGLGSNGDNNSNSNNPYPGFS 236

Query: 226 SVLSSDSMHIGLL--------AAAAHAAATNS---------------------CFTVFFN 256
             L  D +    L            +A   N+                      F V + 
Sbjct: 237 GFLRDDEITTSKLMMMKRNATGGGGNANDANAPGGRVRVEAVAEAVARAACGQAFEVVYY 296

Query: 257 PRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRW 315
           PRAS  EF +  +  V++    R   GMRF+M FETE+SS +  +MGT++ +   DP+RW
Sbjct: 297 PRASTPEFCVKASD-VRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRW 355

Query: 316 SNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 351
            NS WR ++V WDE    +   RVS W +E ++  P
Sbjct: 356 PNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMP 391



 Score = 47.0 bits (110), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 59/111 (53%), Gaps = 16/111 (14%)

Query: 682 VKVY-KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 740
            KV+ +S  VGR+LD+S   SY EL  +L +MFGIE +  D L     +V+ D       
Sbjct: 595 CKVFMESEDVGRTLDLSVIGSYQELYRKLAEMFGIEER-SDLLT---HVVYRDANGVTKR 650

Query: 741 LGDDPWEAFVSNVWYIKI---LSPEDVQKM-------GEQGVESFSPSSGQ 781
           +GD+P+  F+     + I   +S ++V+K        GE G++S S  +GQ
Sbjct: 651 IGDEPFSDFMRATKRLTIKMDISGDNVRKTWITGIRNGENGIDS-STKTGQ 700


>gi|341657336|gb|ADN92995.2| auxin response factor ARF16 [Ipomoea nil]
          Length = 443

 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 153/393 (38%), Positives = 219/393 (55%), Gaps = 52/393 (13%)

Query: 4   DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQL 63
           +  CL+S+LWHACAG +V +P + ++V YFPQGH+E      +  +       P +PP +
Sbjct: 5   EKNCLDSQLWHACAGGMVQMPPMNSKVFYFPQGHAEHTLGNVDFSM------LPKIPPLI 58

Query: 64  ICQLHNVTMHADVETDEVYAQMTLQPLSPEEQK--DTFVPIELGIPSKQPTNYFCKTLTA 121
           +C++  V   ADVETDEVYA++ L P+   E +  D  +       +++PT+ F KTLT 
Sbjct: 59  LCRVGAVKYLADVETDEVYAKIRLVPVGNNEPEFEDAVLGSSASETAEKPTS-FAKTLTQ 117

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SD +  GGFSVPR  AE +FP LD++  PP Q ++A+D+H   WKFRHI+RG P+RHLLT
Sbjct: 118 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGETWKFRHIYRGTPRRHLLT 177

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTV---MP-------------- 224
           TGWS FV+ K+LVAGDS++F+  +   L +GIRRA R   +    P              
Sbjct: 178 TGWSTFVNQKKLVAGDSIVFLRADNGDLCVGIRRAKRCGNIGLDAPSGWNTGAPGSYGGF 237

Query: 225 SSVLSSDSMHI---GL---------------------LAAAAHAAATNSCFTVFFNPRAS 260
           S+ L  D   I   G+                     +  AA+ AAT   F V + PRA+
Sbjct: 238 SAYLREDENRIKRTGINGNPNSSGGGFKERGKVKPKSVIEAAYLAATGQPFEVVYYPRAN 297

Query: 261 PSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSH 319
             EF +  +  V A    +   G+RF+M FETE+SS +  +MGTI+ +   DP+ W NS 
Sbjct: 298 TPEFCVRASS-VNAAMGLQWCSGLRFKMPFETEDSSRISWFMGTISSVQVADPIHWPNSP 356

Query: 320 WRSVKVGWDESTAGERQPRVSLWEIEPLTTFPM 352
           WR ++V WDE    +    VS W +E ++  PM
Sbjct: 357 WRLLQVTWDEPDLLQNVKHVSPWLVELVSNMPM 389


>gi|308044209|ref|NP_001183794.1| hypothetical protein [Zea mays]
 gi|238014578|gb|ACR38324.1| unknown [Zea mays]
 gi|413952427|gb|AFW85076.1| hypothetical protein ZEAMMB73_374158 [Zea mays]
          Length = 340

 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 144/325 (44%), Positives = 197/325 (60%), Gaps = 20/325 (6%)

Query: 11  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 70
           ELWHACAGP+V+LP  G+ VVY PQGH                    +LPP ++C++ +V
Sbjct: 24  ELWHACAGPVVALPRRGSLVVYLPQGHLAAAGGGDVAA---------DLPPHVVCRVADV 74

Query: 71  TMHADVETDEVYAQMTL--------QPLSPEEQKDTFVPIELGIPSKQPT-NYFCKTLTA 121
            + AD  TDEV A++ L        + L     +      +     K    + FCKTLTA
Sbjct: 75  ELCADAATDEVCARLALVAEGEAFGRNLGGGGVEGDDGMEDFDAERKSGMLHMFCKTLTA 134

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SDTSTHGGFSVPRRAAE  FP LD++   P+QEL+A+DLH  +WKFRHI+RGQP+RHLLT
Sbjct: 135 SDTSTHGGFSVPRRAAEDCFPPLDYNQLRPSQELVAKDLHGAKWKFRHIYRGQPRRHLLT 194

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAA 241
           TGWS FV+ K+LV+GD+VLF+  +  +L LG+RRAI+          +SDS     L A 
Sbjct: 195 TGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQLKNEALFEDFNSDSTKRHSLTAV 254

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
           A +    S F + +NPRA+ SE++IP  K++K++ H  V +G R       E+ S RR  
Sbjct: 255 ADSLKNRSVFHISYNPRATASEYIIPYAKFLKSLNHP-VCIGARINFQCHNEDVSERRS- 312

Query: 302 GTITGISDLDPVRWSNSHWRSVKVG 326
           G +  IS++DP++W  S WRS+ +G
Sbjct: 313 GVVVRISEIDPMKWPGSKWRSLLMG 337


>gi|297851948|ref|XP_002893855.1| hypothetical protein ARALYDRAFT_473654 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339697|gb|EFH70114.1| hypothetical protein ARALYDRAFT_473654 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 601

 Score =  270 bits (689), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 154/377 (40%), Positives = 225/377 (59%), Gaps = 27/377 (7%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G  + +  +LW  CAGPL  +P +G +V YFPQGH E V A+T ++++   P   +LP +
Sbjct: 20  GSKRYMYEQLWKLCAGPLCDIPKIGEKVYYFPQGHIELVEASTGEKLNELQP-IVDLPSK 78

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLS-----PEEQKDTFVPIELGIPSKQPTNYFCK 117
           L C++  + +  +  +DE YA++TL P +     P + ++ F P+          N F K
Sbjct: 79  LQCRVITIQLKVERNSDETYAEITLMPYTTQVVIPTQNENQFRPL---------VNSFTK 129

Query: 118 TLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKR 177
            LTASDTS HGGFSVPR+ A +  P LD S   PAQEL+  DLH  +W+F+H +RG P+R
Sbjct: 130 VLTASDTSAHGGFSVPRKLAIECLPPLDMSQPLPAQELLTIDLHGNQWRFKHSYRGTPRR 189

Query: 178 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGL 237
           HLLTTGW+ F+++K+LVAGD ++F+  E  +L +GIRRA      +PSS++S +SM  G+
Sbjct: 190 HLLTTGWNAFITSKKLVAGDVIVFLRGETGELRVGIRRAGYQQGNIPSSIISIESMRHGV 249

Query: 238 LAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSV 297
           +A+A HA      F V + PR+  S+F++   K++ A+ + + +VG RF   FE ++ S 
Sbjct: 250 IASAKHAFDNQCMFIVVYKPRS--SQFIVNYDKFLDAM-NNKFNVGSRFTKRFEEDDFSE 306

Query: 298 RRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLF 357
           RRY GTI G+ D  P  W  S WRS+K   DE  +  R  +VS WEIE  T     PS  
Sbjct: 307 RRYFGTIIGVIDFSP-HWKCSEWRSLK---DEFASFPRPDKVSPWEIEYST-----PSSN 357

Query: 358 PLRLKRPWHPSTSSFND 374
            LRL    +  +  FN+
Sbjct: 358 VLRLSMLKNKCSREFNE 374



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/96 (40%), Positives = 62/96 (64%), Gaps = 3/96 (3%)

Query: 671 QIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQL 729
           Q  QL+ TRT  KV   G ++GR+LD+S  + Y++L  EL ++F ++G+ ++  R+ W++
Sbjct: 506 QSKQLSSTRTCTKVQMHGVALGRALDLSVLNGYDQLILELEKLFDLKGQLQN--RNQWEI 563

Query: 730 VFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQ 765
            F D E D +L+GDDPW  F + V  I I S E+V+
Sbjct: 564 AFKDNEEDEMLVGDDPWPEFCNMVKKIIIYSNEEVK 599


>gi|224113039|ref|XP_002316370.1| predicted protein [Populus trichocarpa]
 gi|222865410|gb|EEF02541.1| predicted protein [Populus trichocarpa]
          Length = 669

 Score =  270 bits (689), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 155/399 (38%), Positives = 217/399 (54%), Gaps = 48/399 (12%)

Query: 6   KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 65
           KCL+S+LWHACAG +V +P V ++V YFPQGH+E    +           +  +P  + C
Sbjct: 6   KCLDSQLWHACAGSMVQMPAVNSKVFYFPQGHAEHAQGSVEF-------GHFQIPALIPC 58

Query: 66  QLHNVTMHADVETDEVYAQMTLQPLSPEE-------QKDTFVPIELGIPSKQPTNYFCKT 118
           ++  +   AD ETDEVYA++ L PL+  +        +D    +  G  S++    F KT
Sbjct: 59  KVSAIKYMADPETDEVYAKIRLIPLNNSDLMLGHGCGEDNDDRLHSGNESQEKPASFAKT 118

Query: 119 LTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRH 178
           LT SD +  GGFSVPR  AE +FP LD++ +PP Q ++A+D+H   WKFRHI+RG P+RH
Sbjct: 119 LTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTILAKDVHGETWKFRHIYRGTPRRH 178

Query: 179 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRP-PTVMPSSVLSSDSMHIGL 237
           LLTTGWS FV+ K+LVAGDS++F+  E   L +GIRRA R       SS  +S + + G 
Sbjct: 179 LLTTGWSNFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKRGIGGNECSSGWNSFAGYSGF 238

Query: 238 -------------------------LAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYV 272
                                    +  AA  AA    F   + PRAS  EF +  +  V
Sbjct: 239 FREDESKLMRRNGNGDMKGKVKAESVIEAASLAANGQPFEAVYYPRASTPEFCVKASA-V 297

Query: 273 KAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDEST 331
           ++    +   GMRF+M FETE+SS +  +MGTI+ +   DP+RW NS WR ++V WDE  
Sbjct: 298 RSAIQIQWCPGMRFKMAFETEDSSRISWFMGTISSVQVADPIRWPNSPWRLLQVAWDEPD 357

Query: 332 AGERQPRVSLWEIEPLTTFPMY------PSLFPLRLKRP 364
                 RVS W +E ++  P        P    LRL +P
Sbjct: 358 LLHNVKRVSPWLVELVSNMPAIHLSPFSPPRKKLRLPQP 396


>gi|413943303|gb|AFW75952.1| hypothetical protein ZEAMMB73_807339 [Zea mays]
          Length = 700

 Score =  269 bits (688), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 157/392 (40%), Positives = 217/392 (55%), Gaps = 47/392 (11%)

Query: 5   NKCL-NSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQL 63
            +CL + +LWHACAG +V +P V +RV YFPQGH+E      + ++ +       +P  +
Sbjct: 17  GRCLVDPQLWHACAGGMVQMPPVHSRVYYFPQGHAEHAQGHAHADLPAG-----RVPALV 71

Query: 64  ICQLHNVTMHADVETDEVYAQMTLQPLSPEE--QKDTFVPIELGIPSKQPTNYFCKTLTA 121
           +C++  V   AD +TDEV A++ L P+ P E    D   P   G    +P + F KTLT 
Sbjct: 72  LCRVDAVRFLADPDTDEVLARVRLAPVRPNEPDHADAAAP---GAREDKPAS-FAKTLTQ 127

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SD +  GGFSVPR  AE +FP LD+S  PP Q ++A+D+H V WKFRHI+RG P+RHLLT
Sbjct: 128 SDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLLT 187

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR-------------PPTVMP---- 224
           TGWS FV+ KRLVAGDS++F+      L +GIRRA +             PP        
Sbjct: 188 TGWSAFVNQKRLVAGDSIVFMRTGNGDLCVGIRRAKKGGIGGGPEFPHHQPPDGGGYGYG 247

Query: 225 ----SSVL---SSDSMHIGL---------LAAAAHAAATNSCFTVFFNPRASPSEFVIPL 268
               S+ L     D+   G          +  AA+ AA+   F V + PRAS  EF +  
Sbjct: 248 YAGFSTFLRGEEDDAAARGKVRVLVRPEEVVEAANLAASGQPFEVVYYPRASTPEFCV-K 306

Query: 269 TKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVGW 327
              V+A   T+   GMRF+M FETE+SS +  +MGT+  +   DP+RW NS WR ++V W
Sbjct: 307 AGAVRAAMRTQWCAGMRFKMAFETEDSSRISWFMGTVAAVQVADPIRWPNSPWRLLQVAW 366

Query: 328 DESTAGERQPRVSLWEIEPLTTFPMYPSLFPL 359
           DE    +   RVS W +E +++ P    L P 
Sbjct: 367 DEPDLLQNVKRVSPWLVELVSSTPAIHHLTPF 398


>gi|337273025|gb|AEI70250.1| auxin response factor 10 [Solanum lycopersicum]
          Length = 699

 Score =  269 bits (687), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 155/386 (40%), Positives = 215/386 (55%), Gaps = 47/386 (12%)

Query: 6   KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVD-SHIPNYPNLPPQLI 64
           KC++S+LWHACAG +V +P V ++V YFPQGH+E     T   VD S +P  P L   ++
Sbjct: 7   KCVDSQLWHACAGGMVQIPPVNSKVYYFPQGHAEH----TLMNVDFSALPRSPAL---IL 59

Query: 65  CQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGI---PSKQPTNYFCKTLTA 121
           C++  V   AD ETDEVYA++ + P+  +          LG     + +  N F KTLT 
Sbjct: 60  CRVAAVKFLADPETDEVYAKIRVVPVGNKGNDFDDDDDILGSNESGTAEKPNSFAKTLTQ 119

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SD +  GGFSVPR  AE +FP LD++  PP Q + A+D+H   WKFRHI+RG P+RHLLT
Sbjct: 120 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVTAKDVHGETWKFRHIYRGTPRRHLLT 179

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMP----------------S 225
           TGWS FV+ K+LVAGDS++F+  E  +L +GIRRA R     P                S
Sbjct: 180 TGWSSFVNQKKLVAGDSIVFLRAENGELCVGIRRAKRGGIGGPEAPSGWNSGAGNYGGFS 239

Query: 226 SVLSSDSMHIGLLAA------------------AAHAAATNSCFTVFFNPRASPSEFVIP 267
           + L  +    G L +                  AA+ A++   F V + PRA+  EF + 
Sbjct: 240 AFLREEMSKNGNLTSPTRSLRGKGRVRPESVVEAAYLASSGQPFEVVYYPRANTPEFCVR 299

Query: 268 LTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVG 326
            +  V A    +   GMRF+M FETE+SS +  +MGTI+ I   DP+RW NS WR ++V 
Sbjct: 300 ASS-VNAAMRIQWCSGMRFKMAFETEDSSRISWFMGTISSIQLADPIRWPNSPWRLLQVA 358

Query: 327 WDESTAGERQPRVSLWEIEPLTTFPM 352
           WDE    +    VS W +E ++  P+
Sbjct: 359 WDEPDLLQNVKHVSPWLVELVSNMPV 384



 Score = 42.7 bits (99), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 6/79 (7%)

Query: 682 VKVY-KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 740
            KV+ +S  VGR+LD+S   SY EL + L  MFG+E    D L    ++++ D    V  
Sbjct: 591 CKVFLESEDVGRTLDLSVMGSYEELYKRLANMFGLER--PDMLT---RVLYHDATGAVKH 645

Query: 741 LGDDPWEAFVSNVWYIKIL 759
            GD+P+  FV +   + IL
Sbjct: 646 TGDEPFSDFVKSAKRLTIL 664


>gi|356537563|ref|XP_003537296.1| PREDICTED: auxin response factor 18-like [Glycine max]
          Length = 700

 Score =  269 bits (687), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 150/389 (38%), Positives = 210/389 (53%), Gaps = 52/389 (13%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
           CL+ +LWHACAG +V +P V ++V YFPQGH+E      N          P +PP + C+
Sbjct: 17  CLDPQLWHACAGGIVQMPAVNSKVYYFPQGHAEHACGPVN------FRTCPKVPPFVPCR 70

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 126
           +  V   AD ETDEVYA++ L PL+  +  D    +  G  ++     F KTLT SD + 
Sbjct: 71  VTAVKYRADPETDEVYAKLKLIPLNANDV-DYDRDVVGGAETQDKPASFAKTLTQSDANN 129

Query: 127 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 186
            GGFSVPR  AE +FP LD+S+ PP Q ++A+D+H   WKFRHI+RG P+RHLLTTGWS 
Sbjct: 130 GGGFSVPRYCAETIFPRLDYSVDPPVQNILAKDVHGETWKFRHIYRGTPRRHLLTTGWST 189

Query: 187 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPT------------------------- 221
           FV+ K+LVAGDS++F+  E   L +GIRRA +                            
Sbjct: 190 FVNHKKLVAGDSIVFLRAENGDLCVGIRRAKKGICGGLETSSGWNPAGGNCHIPYGGFSP 249

Query: 222 -----------------VMPS-SVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSE 263
                            + PS S++    +    ++ A++ AA    F V + PRAS  E
Sbjct: 250 FFREDDNRISRNGNSNGLNPSVSMMGKGKVRPEAVSEASNLAANKKPFEVVYYPRASTPE 309

Query: 264 FVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRS 322
           F +  +  V+A    R   G+RF+M FETE+SS +  +MGTI+     DP+ W NS WR 
Sbjct: 310 FCVKAS-LVEAALQIRWCSGIRFKMAFETEDSSRISWFMGTISSAQVADPLNWPNSPWRL 368

Query: 323 VKVGWDESTAGERQPRVSLWEIEPLTTFP 351
           ++V WDE    +   RVS W +E ++  P
Sbjct: 369 LQVTWDEPDLLQNVRRVSPWLVELVSNMP 397


>gi|379323220|gb|AFD01309.1| auxin response factor 10 [Brassica rapa subsp. pekinensis]
          Length = 705

 Score =  269 bits (687), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 154/396 (38%), Positives = 213/396 (53%), Gaps = 59/396 (14%)

Query: 6   KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 65
           + L+ +LWHACAG +V +P++ + V YFPQGH+E   A      D H P    +PP ++C
Sbjct: 5   RSLDPQLWHACAGSMVQIPSLNSTVFYFPQGHAEHAHAPP----DFHAPR---VPPLILC 57

Query: 66  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTN------YFCKTL 119
           ++ +V   AD ETDEVY+++TL PL P    D      LG+      N       F KTL
Sbjct: 58  RVASVKFLADSETDEVYSKITLLPL-PGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTL 116

Query: 120 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 179
           T SD +  GGFSVPR  AE +FP LD++ +PP Q +IA+D+H   WKFRHI+RG P+RHL
Sbjct: 117 TQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGTPRRHL 176

Query: 180 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR--------------PPTVMPS 225
           LTTGWS FV+ K+L+AGDS++F+ +E   L +GIRRA R               P    S
Sbjct: 177 LTTGWSTFVNQKKLIAGDSIVFLRSETGDLCVGIRRAKRGGLGSNGDNNSNSNNPYPGFS 236

Query: 226 SVLSSDSMHIGLL--------AAAAHAAATNS---------------------CFTVFFN 256
             L  D +    L            +A   N+                      F V + 
Sbjct: 237 GFLRDDEITTSKLMMMKRNATGGGGNANDANAPGGRVRVEAVAEAVARAACGQAFEVVYY 296

Query: 257 PRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRW 315
           PRAS  EF +  +  V++    R   GMRF+M FETE+SS +  +MGT++ +   DP+RW
Sbjct: 297 PRASTPEFCVKASD-VRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRW 355

Query: 316 SNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 351
            NS WR ++V WDE    +   RVS W +E ++  P
Sbjct: 356 PNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMP 391



 Score = 47.0 bits (110), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 59/111 (53%), Gaps = 16/111 (14%)

Query: 682 VKVY-KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 740
            KV+ +S  VGR+LD+S   SY EL  +L +MFGIE +  D L     +V+ D       
Sbjct: 595 CKVFMESEDVGRTLDLSVIGSYQELYRKLAEMFGIEER-SDLLT---HVVYRDANGVTKR 650

Query: 741 LGDDPWEAFVSNVWYIKI---LSPEDVQKM-------GEQGVESFSPSSGQ 781
           +GD+P+  F+     + I   +S ++V+K        GE G++S S  +GQ
Sbjct: 651 IGDEPFSDFMRATKRLTIKMDISGDNVRKTWITGIRNGENGIDS-STKTGQ 700


>gi|409924914|gb|AFV47363.1| auxin response factor 10 [Brassica rapa subsp. rapa]
          Length = 705

 Score =  269 bits (687), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 154/396 (38%), Positives = 213/396 (53%), Gaps = 59/396 (14%)

Query: 6   KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 65
           + L+ +LWHACAG +V +P++ + V YFPQGH+E   A      D H P    +PP ++C
Sbjct: 5   RSLDPQLWHACAGSMVQIPSLNSTVFYFPQGHAEHAHAPP----DFHAPR---VPPLILC 57

Query: 66  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTN------YFCKTL 119
           ++ +V   AD ETDEVY+++TL PL P    D      LG+      N       F KTL
Sbjct: 58  RVASVKFLADSETDEVYSKITLLPL-PGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTL 116

Query: 120 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 179
           T SD +  GGFSVPR  AE +FP LD++ +PP Q +IA+D+H   WKFRHI+RG P+RHL
Sbjct: 117 TQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGTPRRHL 176

Query: 180 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR--------------PPTVMPS 225
           LTTGWS FV+ K+L+AGDS++F+ +E   L +GIRRA R               P    S
Sbjct: 177 LTTGWSTFVNQKKLIAGDSIVFLRSETGDLCVGIRRAKRGGLGSNGDNNSNSNNPYPGFS 236

Query: 226 SVLSSDSMHIGLL--------AAAAHAAATNS---------------------CFTVFFN 256
             L  D +    L            +A   N+                      F V + 
Sbjct: 237 GFLRDDEITTSKLMMMKRNATGGGGNANDANAPGGRVRVEAVAEAVARAACGQAFEVVYY 296

Query: 257 PRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRW 315
           PRAS  EF +  +  V++    R   GMRF+M FETE+SS +  +MGT++ +   DP+RW
Sbjct: 297 PRASTPEFCVKASD-VRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRW 355

Query: 316 SNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 351
            NS WR ++V WDE    +   RVS W +E ++  P
Sbjct: 356 PNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMP 391



 Score = 47.0 bits (110), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 59/111 (53%), Gaps = 16/111 (14%)

Query: 682 VKVY-KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 740
            KV+ +S  VGR+LD+S   SY EL  +L +MFGIE +  D L     +V+ D       
Sbjct: 595 CKVFMESEDVGRTLDLSVIGSYQELYRKLAEMFGIEER-SDLLT---HVVYRDANGVTKR 650

Query: 741 LGDDPWEAFVSNVWYIKI---LSPEDVQKM-------GEQGVESFSPSSGQ 781
           +GD+P+  F+     + I   +S ++V+K        GE G++S S  +GQ
Sbjct: 651 IGDEPFSDFMRATKRLTIKMDISGDNVRKTWITGIRNGENGIDS-STKTGQ 700


>gi|400269963|gb|AFP74916.1| auxin response factor 10 [Brassica napus]
          Length = 706

 Score =  268 bits (686), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 154/396 (38%), Positives = 212/396 (53%), Gaps = 59/396 (14%)

Query: 6   KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 65
           + L+ +LWHACAG +V +P++ + V YFPQGH+E   A      D H P    +PP ++C
Sbjct: 5   RSLDPQLWHACAGSMVQIPSLNSTVFYFPQGHAEHAHAPP----DFHAPR---VPPLILC 57

Query: 66  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTN------YFCKTL 119
           +L +V   AD ETDEVY+++TL PL P    D      LG+      N       F KTL
Sbjct: 58  RLASVKFLADAETDEVYSKITLLPL-PGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTL 116

Query: 120 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 179
           T SD +  GGFSVPR  AE +FP LD++ +PP Q +IA+D+H   WKFRHI+RG P+RHL
Sbjct: 117 TQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGKTWKFRHIYRGTPRRHL 176

Query: 180 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR--------------PPTVMPS 225
           LTTGWS FV+ K+L+AGDS++F+ +E   L +GIRRA R               P    S
Sbjct: 177 LTTGWSTFVNQKKLIAGDSIVFLRSETGDLCVGIRRAKRGGLGSNGDNNSNSNNPYPGFS 236

Query: 226 SVLSSDSMHIGLL--------AAAAHAAATNS---------------------CFTVFFN 256
             L  D +    L            +A   N+                      F V + 
Sbjct: 237 GFLRDDEITTSKLMMMKRNATGGGGNANDANAPGGRVRVEAVAEAVARAACGQAFEVVYY 296

Query: 257 PRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRW 315
           PRAS  EF +  +  V++    R   GMRF+M FETE+SS +  +MGT++ +   DP+RW
Sbjct: 297 PRASTPEFCVKASD-VRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRW 355

Query: 316 SNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 351
            NS WR ++V WDE    +   R S W +E ++  P
Sbjct: 356 PNSPWRLLQVAWDEPDLLQNVKRASPWLVELVSNMP 391



 Score = 47.0 bits (110), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 59/111 (53%), Gaps = 16/111 (14%)

Query: 682 VKVY-KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 740
            KV+ +S  VGR+LD+S   SY EL  +L +MFGIE +  D L     +V+ D       
Sbjct: 596 CKVFMESEDVGRTLDLSVIGSYQELYRKLAEMFGIEER-SDLLT---HVVYRDANGVTKR 651

Query: 741 LGDDPWEAFVSNVWYIKI---LSPEDVQKM-------GEQGVESFSPSSGQ 781
           +GD+P+  F+     + I   +S ++V+K        GE G++S S  +GQ
Sbjct: 652 IGDEPFSDFMRATKRLTIKMDISGDNVRKTWITGIRNGENGIDS-STKTGQ 701


>gi|147806415|emb|CAN76549.1| hypothetical protein VITISV_031905 [Vitis vinifera]
          Length = 273

 Score =  268 bits (686), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 135/195 (69%), Positives = 143/195 (73%), Gaps = 35/195 (17%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ KCLNSELWHACAGPLVSLPTVG+RVVYFPQGHSEQ                      
Sbjct: 16  GEKKCLNSELWHACAGPLVSLPTVGSRVVYFPQGHSEQ---------------------- 53

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
                      ADVETDEVYAQMTLQPL+P+EQKDTF+P+ELGIPSKQPTNYFCKTLTAS
Sbjct: 54  -----------ADVETDEVYAQMTLQPLTPQEQKDTFLPVELGIPSKQPTNYFCKTLTAS 102

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTSTHGGFSVPRRAAEKVFP LDFS QPPAQELIARDLHDVEWKFRHIFRG  +   L  
Sbjct: 103 DTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRG--RDSYLEQ 160

Query: 183 GWSVFVSAKRLVAGD 197
            W V   + R V  D
Sbjct: 161 SWPVITLSGRRVGRD 175


>gi|255586869|ref|XP_002534044.1| Auxin response factor, putative [Ricinus communis]
 gi|223525942|gb|EEF28340.1| Auxin response factor, putative [Ricinus communis]
          Length = 590

 Score =  268 bits (686), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 154/387 (39%), Positives = 210/387 (54%), Gaps = 55/387 (14%)

Query: 6   KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTN---KEVDSHIPNYPNLPPQ 62
           KCL+S+LWHACAG +V +P + +RV YFPQGH+E      +    ++ + IP        
Sbjct: 20  KCLDSQLWHACAGGMVQMPPLNSRVFYFPQGHAEHAQGNVDFGRCQISAMIP-------- 71

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVP---------IELGIPSKQPTN 113
             C++  +   AD ETDEVYA++ L PL     +D F+          +  G  S++   
Sbjct: 72  --CKVSAIKYLADPETDEVYAKIRLIPLI---DRDVFLENSGDDCDDGLYNGAESQEKPA 126

Query: 114 YFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRG 173
            F KTLT SD +  GGFSVPR  AE +FP LD+S +PP Q ++A+D+H   WKFRHI+RG
Sbjct: 127 SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTILAKDVHGETWKFRHIYRG 186

Query: 174 QPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRP---PTVMPSSVLSS 230
            P+RHLLTTGWS FV+ K+LVAGDS++F+  +   L +GIRRA R        PS   S 
Sbjct: 187 TPRRHLLTTGWSNFVNQKKLVAGDSIVFLRADNGDLCVGIRRAKRGIGGGNECPSGWNSF 246

Query: 231 DSMHIGLLAA-------------------------AAHAAATNSCFTVFFNPRASPSEFV 265
                G L                           AA  AA    F + + PRAS  EF 
Sbjct: 247 GGYAAGFLREDESKLMRRNGNGDNKSKVRVESVIQAATLAANGQPFEIVYYPRASTPEFC 306

Query: 266 IPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVK 324
           +  +  V+A    +   GMRF+M FETE+SS +  +MGTI+ +   DP+RW NS WR ++
Sbjct: 307 VRASA-VRAAMQIQWCPGMRFKMPFETEDSSRISWFMGTISSVQVADPIRWPNSPWRLLQ 365

Query: 325 VGWDESTAGERQPRVSLWEIEPLTTFP 351
           V WDE    +   RVS W +E +   P
Sbjct: 366 VAWDEPDLLQNVKRVSPWLVELVANMP 392



 Score = 41.2 bits (95), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 6/80 (7%)

Query: 682 VKVY-KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 740
            KV+ +S  VGR+LD+S   SY EL  +L  MF IE    D L S   +++ D    +  
Sbjct: 507 CKVFMESEDVGRTLDLSVLGSYEELYGKLANMFEIENS--DMLSS---VLYRDAAGAIKR 561

Query: 741 LGDDPWEAFVSNVWYIKILS 760
            GD+P+  F+     + IL+
Sbjct: 562 TGDEPFSEFLKTARRLTILT 581


>gi|15226389|ref|NP_180402.1| auxin response factor 10 [Arabidopsis thaliana]
 gi|46576666|sp|Q9SKN5.1|ARFJ_ARATH RecName: Full=Auxin response factor 10
 gi|12484203|gb|AAG54000.1|AF336919_1 auxin response factor 10 [Arabidopsis thaliana]
 gi|13272405|gb|AAK17141.1|AF325073_1 unknown protein [Arabidopsis thaliana]
 gi|4432846|gb|AAD20695.1| unknown protein [Arabidopsis thaliana]
 gi|225898553|dbj|BAH30407.1| hypothetical protein [Arabidopsis thaliana]
 gi|330253016|gb|AEC08110.1| auxin response factor 10 [Arabidopsis thaliana]
          Length = 693

 Score =  268 bits (685), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 158/395 (40%), Positives = 215/395 (54%), Gaps = 61/395 (15%)

Query: 6   KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 65
           K L+ +LWHACAG +V +P++ + V YF QGH+E   A      D H P    +PP ++C
Sbjct: 5   KSLDPQLWHACAGSMVQIPSLNSTVFYFAQGHTEHAHAPP----DFHAPR---VPPLILC 57

Query: 66  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGI--PS-------KQPTNYFC 116
           ++ +V   AD ETDEV+A++TL PL P    D      LG+  PS       K+    F 
Sbjct: 58  RVVSVKFLADAETDEVFAKITLLPL-PGNDLDLENDAVLGLTPPSSDGNGNGKEKPASFA 116

Query: 117 KTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPK 176
           KTLT SD +  GGFSVPR  AE +FP LD+S +PP Q +IA+D+H   WKFRHI+RG P+
Sbjct: 117 KTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIAKDIHGETWKFRHIYRGTPR 176

Query: 177 RHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIG 236
           RHLLTTGWS FV+ K+L+AGDS++F+ +E   L +GIRRA R       S   SD+ + G
Sbjct: 177 RHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKRGGL---GSNAGSDNPYPG 233

Query: 237 LLA----------------------AAAHAAATNS-----------------CFTVFFNP 257
                                       +AAAT                    F V + P
Sbjct: 234 FSGFLRDDESTTTTSKLMMMKRNGNNDGNAAATGRVRVEAVAEAVARAACGQAFEVVYYP 293

Query: 258 RASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWS 316
           RAS  EF +     V++    R   GMRF+M FETE+SS +  +MGT++ +   DP+RW 
Sbjct: 294 RASTPEFCVKAAD-VRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWP 352

Query: 317 NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 351
           NS WR ++V WDE    +   RVS W +E ++  P
Sbjct: 353 NSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMP 387



 Score = 42.7 bits (99), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 15/104 (14%)

Query: 682 VKVY-KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 740
            KV+ +S  VGR+LD+S   SY EL  +L +MF IE +  D L     +V+ D    +  
Sbjct: 583 CKVFMESEDVGRTLDLSVIGSYQELYRKLAEMFHIEER-SDLLT---HVVYRDANGVIKR 638

Query: 741 LGDDPWEAFVSNVWYIKI---LSPEDVQK-------MGEQGVES 774
           +GD+P+  F+     + I   +  ++V+K        GE G+++
Sbjct: 639 IGDEPFSDFMKATKRLTIKMDIGGDNVRKTWITGIRTGENGIDA 682


>gi|409924912|gb|AFV47362.1| auxin response factor 10 [Brassica oleracea var. oleracea]
          Length = 703

 Score =  268 bits (685), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 153/395 (38%), Positives = 212/395 (53%), Gaps = 58/395 (14%)

Query: 6   KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 65
           + L+ +LWHACAG +V +P++ + V YFPQGH+E   A      D H P    +PP ++C
Sbjct: 5   RSLDPQLWHACAGSMVQIPSLNSTVFYFPQGHAEHAHAPP----DFHAPR---VPPLILC 57

Query: 66  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTN------YFCKTL 119
           ++ +V   AD ETDEVY+++TL PL P    D      LG+      N       F KTL
Sbjct: 58  RVASVKFLADAETDEVYSKITLLPL-PGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTL 116

Query: 120 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 179
           T SD +  GGFSVPR  AE +FP LD++ +PP Q +IA+D+H   WKFRHI+RG P+RHL
Sbjct: 117 TQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGTPRRHL 176

Query: 180 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR-----------------PPTV 222
           LTTGWS FV+ K+L+AGDS++F+ +E   L +GIRRA R                  P  
Sbjct: 177 LTTGWSTFVNQKKLIAGDSIVFLRSETGDLCVGIRRAKRGGLGSNGLGSDNNNNSNNPYP 236

Query: 223 MPSSVLSSDSMHIG-LLAAAAHAAATNS------------------------CFTVFFNP 257
             S  L  D +    L+    +    N                          F V + P
Sbjct: 237 GFSGFLRDDEITTSKLMMMKRNGGNVNDANAPGGRVRVEAVAEAVARAACGQAFEVVYYP 296

Query: 258 RASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWS 316
           RAS  EF +  +  V++    R   GMRF+M FETE+SS +  +MGT++ +   DP+RW 
Sbjct: 297 RASTPEFCVKASD-VRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWP 355

Query: 317 NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 351
           NS WR ++V WDE    +   RVS W +E ++  P
Sbjct: 356 NSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMP 390



 Score = 45.8 bits (107), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 58/111 (52%), Gaps = 16/111 (14%)

Query: 682 VKVY-KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 740
            KV+ +S  VGR+LD+S   SY EL  +L +MFGIE +  D L     +V+ D       
Sbjct: 593 CKVFMESEDVGRTLDLSVIGSYQELYRKLAEMFGIEER-SDLLT---HVVYRDANGVTKR 648

Query: 741 LGDDPWEAFVSNVWYIKI---LSPEDVQKM-------GEQGVESFSPSSGQ 781
           +GD+P+  F+     + I   +  ++V+K        GE G++S S  +GQ
Sbjct: 649 IGDEPFSDFMRATKRLTIKMDICGDNVRKTWITGIRNGENGIDS-STKTGQ 698


>gi|312282557|dbj|BAJ34144.1| unnamed protein product [Thellungiella halophila]
          Length = 702

 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 159/400 (39%), Positives = 222/400 (55%), Gaps = 66/400 (16%)

Query: 6   KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 65
           K L+ +LWHACAG +V +P+V + V YF QGH+E   A      D H P    +PP ++C
Sbjct: 5   KSLDPQLWHACAGSMVQIPSVNSTVFYFAQGHTEHAHAPP----DFHAPR---VPPLILC 57

Query: 66  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGI-PS---------KQPTNYF 115
           ++  V   AD ETDEV++++TL PL P    D      LG+ PS         ++P + F
Sbjct: 58  RVVAVKFLADAETDEVFSKITLLPL-PGNDLDLENDAVLGLTPSPDGNGPNGNEKPAS-F 115

Query: 116 CKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQP 175
            KTLT SD +  GGFSVPR  AE +FP LD++ +PP Q +IA+D+H   WKFRHI+RG P
Sbjct: 116 AKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGTP 175

Query: 176 KRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHI 235
           +RHLLTTGWS FV+ K+L+AGDS++F+ +E   L +GIRRA R    + S+ + SD+ +I
Sbjct: 176 RRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKR--GGLGSNGVGSDNNNI 233

Query: 236 ------GLL-------------------AAAAHAAA------------------TNSCFT 252
                 G L                      A+AAA                      F 
Sbjct: 234 PYPGFSGFLRDDETTTSKLMMMKRSGGNGNDANAAAGGGRVRVEAVAEAVARAARGQAFE 293

Query: 253 VFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLD 311
           V + PRAS  EF +  +  V++    R   GMRF+M FETE+SS +  +MGT++ +   D
Sbjct: 294 VVYYPRASTPEFCVKASD-VRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVAD 352

Query: 312 PVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 351
           P+RW NS WR ++V WDE    +   RVS W +E ++  P
Sbjct: 353 PIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMP 392



 Score = 43.5 bits (101), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 15/104 (14%)

Query: 682 VKVY-KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 740
            KV+ +S  VGR+LD+S   SY EL  +L +MF IE +  D L     +V+ D    +  
Sbjct: 592 CKVFMESEDVGRTLDLSVIGSYQELYRKLAEMFCIEER-SDLLT---HVVYRDANGVIKR 647

Query: 741 LGDDPWEAFVSNVWYIKI---LSPEDVQKM-------GEQGVES 774
           +GD+P+  F+     + I   +  ++V+K        GE G++S
Sbjct: 648 IGDEPFSDFMRATKRLTIKMDIGGDNVRKTWITGIRNGENGIDS 691


>gi|297826099|ref|XP_002880932.1| hypothetical protein ARALYDRAFT_481671 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297326771|gb|EFH57191.1| hypothetical protein ARALYDRAFT_481671 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 697

 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 157/393 (39%), Positives = 212/393 (53%), Gaps = 56/393 (14%)

Query: 6   KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 65
           K L+ +LWHACAG +V +P+V + V YF QGH+E   A      D H P    +PP ++C
Sbjct: 5   KSLDPQLWHACAGSMVQIPSVNSTVFYFAQGHTEHAHAPP----DFHAPR---VPPLILC 57

Query: 66  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGI-PSKQPTNY---------- 114
           ++ +V   AD ETDEV+A++TL PL P    D      LG+ P     N           
Sbjct: 58  RVVSVKFLADAETDEVFAKITLLPL-PGNDLDLENDAVLGLTPPSSDVNVNGNGNEKPAS 116

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F KTLT SD +  GGFSVPR  AE +FP LD++ +PP Q +IA+D+H   WKFRHI+RG 
Sbjct: 117 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGT 176

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRP-----------PTVM 223
           P+RHLLTTGWS FV+ K+L+AGDS++F+ +E   L +GIRRA R            P   
Sbjct: 177 PRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKRGGLGSTGLGSDNPYPG 236

Query: 224 PSSVLSSDS-------MHIGLLAAAAHAAA-----------------TNSCFTVFFNPRA 259
            S  L  D        M +       +AAA                     F V + PRA
Sbjct: 237 FSGFLRDDETSTTSKLMMMKRNGNDGNAAAGGRVRVEAVAEAVARAACGQAFEVVYYPRA 296

Query: 260 SPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNS 318
           S  EF +     V++    R   GMRF+M FETE+SS +  +MGT++ +   DP+RW NS
Sbjct: 297 STPEFCVKAAD-VRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNS 355

Query: 319 HWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 351
            WR ++V WDE    +   RVS W +E ++  P
Sbjct: 356 PWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMP 388



 Score = 43.5 bits (101), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 15/104 (14%)

Query: 682 VKVY-KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 740
            KV+ +S  VGR+LD+S   SY EL  +L +MF IE +  D L     +V+ D    +  
Sbjct: 588 CKVFMESEDVGRTLDLSVIGSYQELYRKLAEMFHIEER-SDLLT---HVVYRDANGAIKR 643

Query: 741 LGDDPWEAFVSNVWYIKI---LSPEDVQK-------MGEQGVES 774
           +GD+P+  F+ +   + I   +  ++V+K        GE G+++
Sbjct: 644 IGDEPFSDFMKSTKRLTIKMDIGGDNVRKTWITGIRTGENGIDA 687


>gi|255578143|ref|XP_002529941.1| Auxin response factor, putative [Ricinus communis]
 gi|223530571|gb|EEF32449.1| Auxin response factor, putative [Ricinus communis]
          Length = 709

 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 200/582 (34%), Positives = 281/582 (48%), Gaps = 112/582 (19%)

Query: 6   KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 65
           K L+ +LWHACAG +V +P + ++V YFPQGH+E   +    +  S IP+       ++C
Sbjct: 6   KRLDPQLWHACAGSMVQIPPINSKVFYFPQGHAEHSQSPV--DFSSRIPSL------VLC 57

Query: 66  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNY------FCKTL 119
           ++  V   AD ETDEVYA+++L PL P  + D    I L   S   TN       F KTL
Sbjct: 58  RVAGVKYLADSETDEVYAKISLFPL-PSNELDFGDEIGLCDTSTNGTNSTEKPTSFAKTL 116

Query: 120 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 179
           T SD +  GGFSVPR  AE +FP LD+S  PP Q ++A+D+H   WKFRHI+RG P+RHL
Sbjct: 117 TQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHL 176

Query: 180 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR-------PPTVMPS------- 225
           LTTGWS FV+ K+LVAGDS++F+  E   L +GIRRA R       P +  PS       
Sbjct: 177 LTTGWSTFVNQKKLVAGDSIVFLRAESGDLCVGIRRAKRGIGGGNGPESSPPSGWTTNAS 236

Query: 226 ---------SVLSSDSMHIGL----------------LAAAAHAAATNSCFTVFFNPRAS 260
                    S+   +    GL                +  +A  AA    F V + PRAS
Sbjct: 237 CVNPYTGGFSLFLKEDESKGLRNGGGIRGKVRVKAEEVLESAALAANGQPFEVVYYPRAS 296

Query: 261 PSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSH 319
             EF +  +  V+A    +   GMRF+M FETE+SS +  +MGTI  +   DP+RW NS 
Sbjct: 297 TPEFCVKASS-VRASTRIQWCSGMRFKMAFETEDSSRISWFMGTIASVQVADPIRWPNSP 355

Query: 320 WRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL-----RLKRPWHPS------ 368
           WR ++V WDE    +   RVS W +E ++  P+   L P      +L+ P H        
Sbjct: 356 WRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVI-HLSPFSPPRKKLRLPQHLDFPLDGQ 414

Query: 369 --TSSFNDN-----------RDETASGLNWLRGGTGEQGLTTLNFQSL--GMFPWMQQ-- 411
               SF+ N            D T +G+   R       L+ L    L  G+F    Q  
Sbjct: 415 FQLPSFSGNPLGPSSPLCCLSDNTPAGIQGARHAQFGISLSDLQLNKLQSGLFLSSLQRF 474

Query: 412 ----RVEPSFL--GNDHNQQYQAMLAAG------MQSGDPVRQQFMQLQQPF---QYLQQ 456
               RV  SF+    + N+    +L  G       +S +  R QF+   QP    Q + +
Sbjct: 475 NSHSRVSESFMKSNTNSNENLSCLLTMGNSNTNSEKSDNVKRHQFVLFGQPILTEQQISR 534

Query: 457 SGSQNPLQLKQQQHLLQQLNSQAEDRAQQQQQPQQHMYHDAL 498
           S S + +     Q L ++L+S         + P++   HD L
Sbjct: 535 SCSTDAV----SQVLSKKLSS--------DESPEKAKIHDVL 564



 Score = 42.0 bits (97), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 10/81 (12%)

Query: 682 VKVY-KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGW--QLVFVDRENDV 738
            KV+ +S  VGR+LD+S   SY EL   L  MFGIE       RS     +++ D    +
Sbjct: 599 CKVFLESEDVGRTLDLSVLGSYEELYSRLANMFGIE-------RSEMLHHVLYRDAAGAI 651

Query: 739 LLLGDDPWEAFVSNVWYIKIL 759
              GD+P+  F      + IL
Sbjct: 652 RQTGDEPFSVFAKTAKRLTIL 672


>gi|19352051|dbj|BAB85919.1| auxin response factor 10 [Oryza sativa]
          Length = 700

 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 185/539 (34%), Positives = 259/539 (48%), Gaps = 96/539 (17%)

Query: 5   NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIP-NYPN--LPP 61
           +KCL+ +LWHACAG +V +P V ++V YFPQGH+E            H P  +P   +P 
Sbjct: 17  DKCLDPQLWHACAGGMVQMPPVSSKVYYFPQGHAEHA--------QGHGPVEFPGGRVPA 68

Query: 62  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQ------KDTFVPIELGIPSKQPTNYF 115
            ++C++  V   AD +TDEV+A++ L P+   EQ       D           ++    F
Sbjct: 69  LVLCRVAGVRFMADPDTDEVFAKIRLVPVRANEQGYAGDADDGIGAAAAAAAQEEKPASF 128

Query: 116 CKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQP 175
            KTLT SD +  GGFSVPR  AE +FP LD+S  PP Q ++A+D+H V WKFRHI+RG P
Sbjct: 129 AKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTP 188

Query: 176 KRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMP----------- 224
           +RHLLTTGWS FV+ K+LVAGDS++F+  E   L +GIRRA +     P           
Sbjct: 189 RRHLLTTGWSTFVNQKKLVAGDSIVFMRTENGDLCVGIRRAKKGGVGGPEFLPPPPPPPP 248

Query: 225 -----------SSVLSSDSMHIGLLAA----------------AAHAAATNSCFTVFFNP 257
                      S  L  D     + AA                AA+ A +   F V + P
Sbjct: 249 TPAAGGNYGGFSMFLRGDDDGNKMAAAARGKVRARVRPEEVVEAANLAVSGQPFEVVYYP 308

Query: 258 RASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWS 316
           RAS  EF +     V+A   T+   GMRF+M FETE+SS +  +MGT++ +   DP+RW 
Sbjct: 309 RASTPEFCVK-AGAVRAAMRTQWFAGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWP 367

Query: 317 NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL-----RLKRPWHPS--- 368
           NS WR ++V WDE    +   RVS W +E ++  P    L P      +L  P +P    
Sbjct: 368 NSPWRLLQVSWDEPDLLQNVKRVSPWLVELVSNMPAI-HLAPFSPPRKKLCVPLYPELPI 426

Query: 369 -----TSSFNDN------------RDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQ 411
                T  F+ N             D T +G+   R       L+ L+   L      Q 
Sbjct: 427 DGQFPTPMFHGNPLARGVGPMCYFPDGTPAGIQGARHAQFGISLSDLHLNKL------QS 480

Query: 412 RVEP-SFLGNDHNQQYQAMLAAGMQSGDPVRQQ----FMQLQQPFQYLQQSGSQNPLQL 465
            + P  F   DH  Q +  +AAG+  G P  +      + +  P    +  G + P QL
Sbjct: 481 SLSPHGFHQLDHGMQPR--IAAGLIIGHPAARDDISCLLTIGSPQNNKKSDGKKAPAQL 537


>gi|168056839|ref|XP_001780425.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162668101|gb|EDQ54715.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 420

 Score =  267 bits (683), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 155/386 (40%), Positives = 213/386 (55%), Gaps = 56/386 (14%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYP-NLPPQ--LI 64
           L+++LWHACAG +V LP VG +VVYFPQGH EQ A+T         P +P  L P   + 
Sbjct: 27  LDAQLWHACAGGMVQLPHVGAKVVYFPQGHGEQAAST---------PEFPRTLVPNGSVP 77

Query: 65  CQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDT 124
           C++ +V   AD ETDEV+A++ LQP      +D      L  P  +    F KTLT SD 
Sbjct: 78  CRVVSVNFLADTETDEVFARICLQPEIGSSAQD-LTDDSLASPPLEKPASFAKTLTQSDA 136

Query: 125 STHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 184
           +  GGFS+PR  AE +FP LD+ + PP Q ++A+D+H   WKFRHI+RG P+RHLLTTGW
Sbjct: 137 NNGGGFSIPRYCAETIFPPLDYCIDPPVQTVLAKDVHGEVWKFRHIYRGTPRRHLLTTGW 196

Query: 185 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR-------------------------- 218
           S FV+ K+LVAGD+++F+     +L +G+RR++R                          
Sbjct: 197 STFVNQKKLVAGDAIVFLRIASGELCVGVRRSMRGVSNGESSSWHSSISGVGDNGYALNS 256

Query: 219 --------PPTVMPSSVLSSDSMHI---GLLAAAAHAAATNSCFTVFFNPRASPSEFVIP 267
                    PT   +S  + D   +    +L AAA A +    F V + PRAS +EF + 
Sbjct: 257 SIRSENQGSPT---TSSFARDRARVTAKSVLEAAALAVSGER-FEVVYYPRASTAEFCVK 312

Query: 268 LTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVG 326
               VK         GMRF+M FETE+SS +  +MGTI  +   DPV W +S WR ++V 
Sbjct: 313 -AGLVKRALEQSWYAGMRFKMAFETEDSSRISWFMGTIAAVQAADPVLWPSSPWRVLQVT 371

Query: 327 WDESTAGERQPRVSLWEIEPLTTFPM 352
           WDE    +   RVS W++E + T PM
Sbjct: 372 WDEPDLLQGVNRVSPWQLELVATLPM 397


>gi|168061548|ref|XP_001782750.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162665783|gb|EDQ52456.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 595

 Score =  267 bits (683), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 160/393 (40%), Positives = 220/393 (55%), Gaps = 43/393 (10%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           L+++LWHACAG +V LP VG +V+YFPQGH EQ AATT     S  P+       + C++
Sbjct: 12  LDAQLWHACAGGMVQLPQVGAKVIYFPQGHGEQ-AATTPDFSASMGPSG-----TIPCRV 65

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTH 127
            +V   AD ETDEV+A+M LQP       D         P ++P + F KTLT SD +  
Sbjct: 66  VSVNFLADTETDEVFARMRLQPEGLHGLNDMTEEAPSSPPPEKPAS-FAKTLTQSDANNG 124

Query: 128 GGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 187
           GGFSVPR  AE +FP LD+S  PP Q ++A+D+H   WKFRHI+RG P+RHLLTTGWS F
Sbjct: 125 GGFSVPRYCAETIFPPLDYSSDPPVQTVLAKDVHGDVWKFRHIYRGTPRRHLLTTGWSTF 184

Query: 188 VSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAAT 247
           V+ K+LVAGD+++F+ +   +L +G+RR++R          SS+    G+  + +  A+T
Sbjct: 185 VNQKKLVAGDAIVFLRSASGELCVGVRRSMRGAMGDNGHGGSSN----GVSRSGSQGAST 240

Query: 248 NSCFT-------------------------VFFNPRASPSEFVIPLTKYVKAVFHTRVSV 282
            S F                          V + PRAS +EF +      +A+ HT  + 
Sbjct: 241 TSSFARNRARVTAKSVLDAAALAVAGKPFEVVYYPRASTAEFCVKAGLVKQALDHTWYA- 299

Query: 283 GMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSL 341
           GMRF+M FETE+SS +  +MGTI  +   DP+ W NS WR   V WDE    +   RVS 
Sbjct: 300 GMRFKMAFETEDSSRISWFMGTIAAVKPADPLLWPNSPWR---VTWDEPDLLQGVSRVSP 356

Query: 342 WEIEPLTTFPMY--PSLFPLRLKRPWHPSTSSF 372
           W++E + T PM   P  +P +  R   P    F
Sbjct: 357 WQVELVATLPMQLPPFSYPKKKLRAVQPQELHF 389



 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 66/140 (47%), Gaps = 21/140 (15%)

Query: 627 PTTVSSFTTSVDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQID-----QLTPTRTF 681
           PTT   F  S+DP  +S    +         C+  +S  +    Q +     +L+     
Sbjct: 469 PTTFLLFGQSIDPSSNSKAAQEQ--------CVASASSSVEGYRQNEGGPWPELSIGTEH 520

Query: 682 VKVYKSGS-VGRSLDISRFSSYNELREELGQMFGI-EGKFEDPLRSGWQLVFVDRENDVL 739
            KV++ G  VGR+LD++ F SY E+ + L  MF +    F++      ++V+ D E   L
Sbjct: 521 CKVFREGDEVGRTLDLANFKSYEEVYDRLAGMFSVPAASFKN------RVVYQDGEGCTL 574

Query: 740 LLGDDPWEAFVSNVWYIKIL 759
            +G +P+  FV+ V  + IL
Sbjct: 575 PVGAEPYGNFVAAVRRLTIL 594


>gi|115469600|ref|NP_001058399.1| Os06g0685700 [Oryza sativa Japonica Group]
 gi|75253259|sp|Q653H7.1|ARFR_ORYSJ RecName: Full=Auxin response factor 18; AltName: Full=OsARF10
 gi|52076670|dbj|BAD45570.1| putative auxin response factor 10 [Oryza sativa Japonica Group]
 gi|52077007|dbj|BAD46040.1| putative auxin response factor 10 [Oryza sativa Japonica Group]
 gi|113596439|dbj|BAF20313.1| Os06g0685700 [Oryza sativa Japonica Group]
 gi|215713413|dbj|BAG94550.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 700

 Score =  267 bits (683), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 185/539 (34%), Positives = 259/539 (48%), Gaps = 96/539 (17%)

Query: 5   NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIP-NYPN--LPP 61
           +KCL+ +LWHACAG +V +P V ++V YFPQGH+E            H P  +P   +P 
Sbjct: 17  DKCLDPQLWHACAGGMVQMPPVSSKVYYFPQGHAEHA--------QGHGPVEFPGGRVPA 68

Query: 62  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQ------KDTFVPIELGIPSKQPTNYF 115
            ++C++  V   AD +TDEV+A++ L P+   EQ       D           ++    F
Sbjct: 69  LVLCRVAGVRFMADPDTDEVFAKIRLVPVRANEQGYAGDADDGIGAAAAAAAQEEKPASF 128

Query: 116 CKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQP 175
            KTLT SD +  GGFSVPR  AE +FP LD+S  PP Q ++A+D+H V WKFRHI+RG P
Sbjct: 129 AKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTP 188

Query: 176 KRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMP----------- 224
           +RHLLTTGWS FV+ K+LVAGDS++F+  E   L +GIRRA +     P           
Sbjct: 189 RRHLLTTGWSTFVNQKKLVAGDSIVFMRTENGDLCVGIRRAKKGGVGGPEFLPPPPPPPP 248

Query: 225 -----------SSVLSSDSMHIGLLAA----------------AAHAAATNSCFTVFFNP 257
                      S  L  D     + AA                AA+ A +   F V + P
Sbjct: 249 TPAAGGNYGGFSMFLRGDDDGNKMAAAARGKVRARVRPEEVVEAANLAVSGQPFEVVYYP 308

Query: 258 RASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWS 316
           RAS  EF +     V+A   T+   GMRF+M FETE+SS +  +MGT++ +   DP+RW 
Sbjct: 309 RASTPEFCVK-AGAVRAAMRTQWFAGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWP 367

Query: 317 NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL-----RLKRPWHPS--- 368
           NS WR ++V WDE    +   RVS W +E ++  P    L P      +L  P +P    
Sbjct: 368 NSPWRLLQVSWDEPDLLQNVKRVSPWLVELVSNMPAI-HLAPFSPPRKKLCVPLYPELPI 426

Query: 369 -----TSSFNDN------------RDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQ 411
                T  F+ N             D T +G+   R       L+ L+   L      Q 
Sbjct: 427 DGQFPTPMFHGNPLARGVGPMCYFPDGTPAGIQGARHAQFGISLSDLHLNKL------QS 480

Query: 412 RVEPSFLGN-DHNQQYQAMLAAGMQSGDPVRQQ----FMQLQQPFQYLQQSGSQNPLQL 465
            + P  L   DH  Q +  +AAG+  G P  +      + +  P    +  G + P QL
Sbjct: 481 SLSPHGLHQLDHGMQPR--IAAGLIIGHPAARDDISCLLTIGSPQNNKKSDGKKAPAQL 537


>gi|326496483|dbj|BAJ94703.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 709

 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 158/408 (38%), Positives = 223/408 (54%), Gaps = 45/408 (11%)

Query: 2   IGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 61
           +G  +CL+ +LWHACAG +V +P   +RV YFPQGH+E        E+ + +   P LP 
Sbjct: 25  VGAERCLDPQLWHACAGGMVQMPPARSRVYYFPQGHAEHANGGGAAELAAAVGPRP-LPA 83

Query: 62  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEE----QKDTFVPIELGIP-SKQPTNYFC 116
            ++C +  V   AD +TDEV+A++ L P+ P E    + +   P+    P +++  + F 
Sbjct: 84  LVLCCVAGVRFLADPDTDEVFAKIRLVPVGPGEAGFREPEGLGPLGSDPPEAREKLSSFA 143

Query: 117 KTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPK 176
           KTLT SD +  GGFSVPR  AE +FP LD+   PP Q ++A+D+H   WKFRHI+RG P+
Sbjct: 144 KTLTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIYRGTPR 203

Query: 177 RHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR-------------PPTVM 223
           RHLLTTGWS FV+ K+LVAGDS++F+  E  +L +GIRRA R              P   
Sbjct: 204 RHLLTTGWSTFVNQKKLVAGDSIVFLRTEHGELCVGIRRAKRVTCGGMECISGWNAPGYG 263

Query: 224 PSSVLSSD------------------SMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFV 265
             S    D                   + I  +  AA  AA +  F V + PRAS  EFV
Sbjct: 264 GFSAFLKDEENKMMNGGPAGYVKGRGKVKIADVVEAATLAANSQPFEVVYYPRASTPEFV 323

Query: 266 IPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVK 324
           +     ++A        GMRF+M FETE+SS +  +MGTI+ +   DP+RW NS WR ++
Sbjct: 324 VKAAA-MQAAMRIHWCPGMRFKMAFETEDSSRISWFMGTISSVQVADPLRWPNSPWRLLQ 382

Query: 325 VGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL-----RLKRPWHP 367
           V WDE    +    VS W +E +++ P    L P      +L+ P HP
Sbjct: 383 VTWDEPDLLQNVKCVSPWLVELVSSIPPI-HLGPFSPPRKKLRVPQHP 429


>gi|148840309|sp|Q9FX25.3|ARFM_ARATH RecName: Full=Auxin response factor 13
          Length = 621

 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 145/340 (42%), Positives = 206/340 (60%), Gaps = 13/340 (3%)

Query: 11  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 70
           +LW+ CAGPL  LP  G +V YFPQGH E +  +T  E+D HI    +LP +L C++  +
Sbjct: 25  KLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELD-HIRPIFDLPSKLRCRVVAI 83

Query: 71  TMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYF-CKTLTASDTSTHGG 129
               D  TDEVYAQ++L P + E      +     + +++P  YF  K LTASD S  GG
Sbjct: 84  DRKVDKNTDEVYAQISLMPDTTE-----VMTHNTTMDTRRPIVYFFSKILTASDVSLSGG 138

Query: 130 FSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT--GWSVF 187
             +P++ A + FP LD S     Q L+A+DL+  EW F+H+FRG P+RH+ T+  GWSVF
Sbjct: 139 LIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSGGGWSVF 198

Query: 188 VSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAAT 247
            + KRL+ GD  + +  E  +L  GIRRA      +PSSV+S++ M  G++A+  +A  T
Sbjct: 199 ATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHGVIASVVNAFKT 258

Query: 248 NSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGI 307
              F V + P  S S+FVI   K+V A+ +  + VG RFRM FE ++ S +RY GTI G+
Sbjct: 259 KCMFNVVYKP--SSSQFVISYDKFVDAMNNNYI-VGSRFRMQFEGKDFSEKRYDGTIIGV 315

Query: 308 SDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 347
           +D+ P  W +S WRS+KV WDE +   R  +VS W+IE L
Sbjct: 316 NDMSP-HWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHL 354



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 64/109 (58%), Gaps = 4/109 (3%)

Query: 678 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           TR+ +KV+  G ++ R++D++    YN+L ++L ++F ++ +     R+ W++VF + E 
Sbjct: 507 TRSRIKVHMQGVAISRAVDLTAMHGYNQLIQKLEELFDLKDELR--TRNQWEIVFTNNEG 564

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANS 785
             +L+GDDPW  F +    I I S E+++KM  +  + F P S    +S
Sbjct: 565 AEMLVGDDPWPEFCNMAKRIFICSKEEIKKMKLKN-KFFQPESKALTSS 612


>gi|297798970|ref|XP_002867369.1| hypothetical protein ARALYDRAFT_913475 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297313205|gb|EFH43628.1| hypothetical protein ARALYDRAFT_913475 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 670

 Score =  266 bits (681), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 165/419 (39%), Positives = 228/419 (54%), Gaps = 74/419 (17%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLP-- 60
           G  K L+ +LWHACAG +V +P + ++V YFPQGH+E      +         + NLP  
Sbjct: 11  GTEKGLDPQLWHACAGGMVRMPPMNSKVFYFPQGHAENAYDCVD---------FGNLPIH 61

Query: 61  PQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGI--------PSKQPT 112
           P ++C++  +   AD E+DEVYA++ L PL    + D +V  E G          + + T
Sbjct: 62  PMVLCRVLAIKYMADAESDEVYAKLRLIPL----KDDEYVDHEYGDGEDSNGFESNSEKT 117

Query: 113 NYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFR 172
             F KTLT SD +  GGFSVPR  AE +FP LD++ +PP Q ++A+D+H   WKFRHI+R
Sbjct: 118 PSFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRHIYR 177

Query: 173 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR-------------- 218
           G P+RHLLTTGWS FV+ K+LVAGDS++F+  E   L +GIRRA R              
Sbjct: 178 GTPRRHLLTTGWSNFVNQKKLVAGDSIVFMRAENGDLCVGIRRAKRGGIGNGPEYSAGWN 237

Query: 219 --PPTVMPSSVLSSDSMH------------IGLLAA-----AAHAAATNSCFTVFFNPRA 259
               +   SS+L  D  +             G + A     AA  A +   F V + PRA
Sbjct: 238 PIGGSCGYSSLLREDESNSLRRSNCSLADRKGKVTAESVIEAATLAISGRPFEVVYYPRA 297

Query: 260 SPSEFVIPLTKYVKAVFHTRV--SVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWS 316
           S SEF +   K V A    R+    GMRF+M FETE+SS +  +MGT++ ++  DP+RW 
Sbjct: 298 STSEFCV---KAVDARAAMRIPWCSGMRFKMAFETEDSSRISWFMGTVSAVNVSDPIRWP 354

Query: 317 NSHWRSVKVGWDESTAGERQPRVSLWEIE--------PLTTFPMYPSLFPLRLKRPWHP 367
           NS WR ++V WDE    +   RV+ W +E        PLT+F   P    +RL  P HP
Sbjct: 355 NSPWRLLQVAWDEPDLLQNVKRVNPWLVELVSNVHPIPLTSFS--PPRKKMRL--PQHP 409



 Score = 42.4 bits (98), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 14/94 (14%)

Query: 682 VKVY-KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 740
            KV+ +S  VGR+LD+S   SY EL  +L  MFGI  K  + L S   +++ D    +  
Sbjct: 587 CKVFMESDDVGRTLDLSVLGSYEELSRKLSDMFGI--KKSEMLSS---VLYRDASGAIKY 641

Query: 741 LGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVES 774
            G++P+  F+     + IL+        EQG ES
Sbjct: 642 AGNEPFSEFLKTARRLTILT--------EQGSES 667


>gi|79356539|ref|NP_174679.3| auxin response factor 13 [Arabidopsis thaliana]
 gi|49616361|gb|AAT67077.1| ARF13 [Arabidopsis thaliana]
 gi|332193558|gb|AEE31679.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 505

 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 145/340 (42%), Positives = 206/340 (60%), Gaps = 13/340 (3%)

Query: 11  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 70
           +LW+ CAGPL  LP  G +V YFPQGH E +  +T  E+D HI    +LP +L C++  +
Sbjct: 25  KLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELD-HIRPIFDLPSKLRCRVVAI 83

Query: 71  TMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYF-CKTLTASDTSTHGG 129
               D  TDEVYAQ++L P + E      +     + +++P  YF  K LTASD S  GG
Sbjct: 84  DRKVDKNTDEVYAQISLMPDTTE-----VMTHNTTMDTRRPIVYFFSKILTASDVSLSGG 138

Query: 130 FSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT--GWSVF 187
             +P++ A + FP LD S     Q L+A+DL+  EW F+H+FRG P+RH+ T+  GWSVF
Sbjct: 139 LIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSGGGWSVF 198

Query: 188 VSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAAT 247
            + KRL+ GD  + +  E  +L  GIRRA      +PSSV+S++ M  G++A+  +A  T
Sbjct: 199 ATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHGVIASVVNAFKT 258

Query: 248 NSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGI 307
              F V + P  S S+FVI   K+V A+ +  + VG RFRM FE ++ S +RY GTI G+
Sbjct: 259 KCMFNVVYKP--SSSQFVISYDKFVDAMNNNYI-VGSRFRMQFEGKDFSEKRYDGTIIGV 315

Query: 308 SDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 347
           +D+ P  W +S WRS+KV WDE +   R  +VS W+IE L
Sbjct: 316 NDMSP-HWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHL 354


>gi|400269948|gb|AFP74910.1| auxin response factor 10 [Brassica napus]
 gi|400269950|gb|AFP74911.1| auxin response factor 10 [Brassica napus]
 gi|400269953|gb|AFP74912.1| auxin response factor 10 [Brassica napus]
 gi|400269956|gb|AFP74913.1| auxin response factor 10 [Brassica napus]
 gi|400269959|gb|AFP74914.1| auxin response factor 10 [Brassica napus]
          Length = 703

 Score =  266 bits (680), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 152/395 (38%), Positives = 212/395 (53%), Gaps = 58/395 (14%)

Query: 6   KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 65
           + L+ +LW ACAG +V +P++ + V YFPQGH+E   A      D H P    +PP ++C
Sbjct: 5   RSLDPQLWQACAGSMVQIPSLNSTVFYFPQGHAEHAHAPP----DFHAPR---VPPLILC 57

Query: 66  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTN------YFCKTL 119
           ++ +V   AD ETDEVY+++TL PL P    D      LG+      N       F KTL
Sbjct: 58  RVASVKFLADAETDEVYSKITLLPL-PGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTL 116

Query: 120 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 179
           T SD +  GGFSVPR  AE +FP LD++ +PP Q +IA+D+H   WKFRHI+RG P+RHL
Sbjct: 117 TQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGTPRRHL 176

Query: 180 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR-----------------PPTV 222
           LTTGWS FV+ K+L+AGDS++F+ +E  +L +GIRRA R                  P  
Sbjct: 177 LTTGWSTFVNQKKLIAGDSIVFLRSETGELCVGIRRAKRGGLGSNGLGSDNNNNSNNPYP 236

Query: 223 MPSSVLSSDSMHIG-LLAAAAHAAATNS------------------------CFTVFFNP 257
             S  L  D +    L+    +    N                          F V + P
Sbjct: 237 GFSGFLRDDEITTSKLMMMKRNGGNVNDANAPGGRVRVEAVAEAVARAACGQAFEVVYYP 296

Query: 258 RASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWS 316
           RAS  EF +  +  V++    R   GMRF+M FETE+SS +  +MGT++ +   DP+RW 
Sbjct: 297 RASTPEFCVKASD-VRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWP 355

Query: 317 NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 351
           NS WR ++V WDE    +   RVS W +E ++  P
Sbjct: 356 NSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMP 390



 Score = 47.0 bits (110), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 59/111 (53%), Gaps = 16/111 (14%)

Query: 682 VKVY-KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 740
            KV+ +S  VGR+LD+S   SY EL  +L +MFGIE +  D L     +V+ D       
Sbjct: 593 CKVFMESEDVGRTLDLSVIGSYQELYRKLAEMFGIEER-SDLLT---HVVYRDANGVTKR 648

Query: 741 LGDDPWEAFVSNVWYIKI---LSPEDVQKM-------GEQGVESFSPSSGQ 781
           +GD+P+  F+     + I   +S ++V+K        GE G++S S  +GQ
Sbjct: 649 IGDEPFSDFMRATKRLTIKMDISGDNVRKTWITGIRNGENGIDS-STKTGQ 698


>gi|357123494|ref|XP_003563445.1| PREDICTED: auxin response factor 18-like [Brachypodium distachyon]
          Length = 706

 Score =  266 bits (679), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 174/509 (34%), Positives = 251/509 (49%), Gaps = 83/509 (16%)

Query: 4   DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQL 63
           D +CL+ +LWHACAG +V +P V ++V YFPQGH+E  A     +          +P  +
Sbjct: 18  DGRCLDPQLWHACAGGMVQMPPVSSKVYYFPQGHAEH-AQCGGGDFPPGAGAGRGIPALV 76

Query: 64  ICQLHNVTMHADVETDEVYAQMTLQPLSPEEQ---------KDTFVPIELGIPSKQPTNY 114
           +C++  V   AD +TDEV+A++ L P  P EQ                     +++P + 
Sbjct: 77  LCRVAGVHFMADPDTDEVFAKIRLVPARPHEQPGGDAADDGGGINGAAAGHAEAEKPAS- 135

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F KTLT SD +  GGFSVPR  AE +FP LD+S  PP Q ++A+D+H V WKFRHI+RG 
Sbjct: 136 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGT 195

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR---------------- 218
           P+RHLLTTGWS FV+ K+LVAGDS++F+  E   L +GIRRA +                
Sbjct: 196 PRRHLLTTGWSSFVNQKKLVAGDSIVFMRTENGDLCVGIRRAKKGGIGGPELLPPPPPPP 255

Query: 219 -----------------PPTVMPSSVLSSDSMHIGL----LAAAAHAAATNSCFTVFFNP 257
                               +M ++  +     + +    +A AA+ AA+   F V + P
Sbjct: 256 GTNYGGFSMFLRGEEDGSNKMMAAAAAARGKARVRVRPEEVAEAANLAASGQPFDVVYYP 315

Query: 258 RASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWS 316
           RAS  EF +     V+A   T+   GMRF+M FETE+SS +  +MGT++ +   DP+RW 
Sbjct: 316 RASTPEFCVK-AGAVRAAMRTQWCPGMRFKMAFETEDSSRISWFMGTVSAVQVSDPIRWP 374

Query: 317 NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL-----RLKRPWHPS--- 368
           NS WR ++V WDE    +   RVS W +E ++  P    L P      +L  P++P    
Sbjct: 375 NSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPAI-HLAPFSPPRKKLCVPFYPELPL 433

Query: 369 -----TSSFNDN-------------RDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQ 410
                   F+ N              D T +G+   R       L+ L+   L      Q
Sbjct: 434 DGQFPAPMFHGNPLGRGGVGPMCYFPDGTPAGIQGARHAQFGISLSDLHLNKL------Q 487

Query: 411 QRVEPSFLGNDHNQQYQAMLAAGMQSGDP 439
             + P  L N  +   Q  +AAG+  G P
Sbjct: 488 SSLSPHGLHNQIDHGAQPRIAAGLIIGHP 516


>gi|356539348|ref|XP_003538160.1| PREDICTED: auxin response factor 18-like [Glycine max]
          Length = 697

 Score =  265 bits (678), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 157/408 (38%), Positives = 221/408 (54%), Gaps = 58/408 (14%)

Query: 6   KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 65
           K L+ +LWHACAG +V +P V ++V YFPQGH+E    T +  V          PP ++C
Sbjct: 6   KVLDPQLWHACAGGMVQMPQVHSKVFYFPQGHAEHAHTTIDLRV----------PPFILC 55

Query: 66  QLHNVTMHADVETDEVYAQMTLQPLSPEE---QKDTFVPIELGIPS--KQPTNYFCKTLT 120
            +  V   AD ETD+V+A+++L PL   E     D+    +   PS  ++P + F KTLT
Sbjct: 56  NVEAVKFMADPETDQVFAKLSLVPLRNSELGPDSDSAAGDDAAEPSSCEKPAS-FAKTLT 114

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
            SD +  GGFSVPR  AE +FP LD + +PP Q ++A+D+H   W+FRHI+RG P+RHLL
Sbjct: 115 QSDANNGGGFSVPRYCAETIFPRLDCTAEPPVQTVVAKDVHGETWRFRHIYRGTPRRHLL 174

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR------------------PPTV 222
           TTGWS FV+ K+LVAGDSV+F+  E   L +GIRRA +                     +
Sbjct: 175 TTGWSSFVNQKKLVAGDSVVFLRAENGDLCVGIRRAKKGIDEGSGLASSSVWSSASGSGI 234

Query: 223 MPSSVLSSDSMHI--------GLLAA-----------AAHAAATNSCFTVFFNPRASPSE 263
            P S    +   +        G L+            A   AA+N  F V + PRAS  E
Sbjct: 235 GPFSFFLKEENKMLRNGCGVGGNLSGRVKVRAEDVVEAVTLAASNKAFEVVYYPRASTPE 294

Query: 264 FVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRS 322
           F +  +  V A    +   GMRF+M FETE+++ +  +MGTI  +  +DP+ W NS WR 
Sbjct: 295 FCVKASS-VGAAMRIQWCSGMRFKMAFETEDATRISWFMGTIASVQVVDPICWPNSPWRL 353

Query: 323 VKVGWDESTAGERQPRVSLWEIEPLTTFPM--YPSLFPLRLK-RPWHP 367
           ++V WDE    +   RVS W +E ++  P+  +    P R K RP HP
Sbjct: 354 LQVTWDEPDLLQNVKRVSPWLVELVSNIPLINFTPFSPPRKKLRPQHP 401



 Score = 46.6 bits (109), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 10/82 (12%)

Query: 682 VKVY-KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGW--QLVFVDRENDV 738
            KV+ +S  VGR+LD+S+F SY EL   LG MFGIE       RS     +++ D    V
Sbjct: 588 CKVFLESEDVGRTLDLSQFGSYEELYRRLGNMFGIE-------RSEILNHVLYYDAAGAV 640

Query: 739 LLLGDDPWEAFVSNVWYIKILS 760
              G++P+  F+     + IL+
Sbjct: 641 KQTGEEPFSDFMKTAKRLTILT 662


>gi|4938484|emb|CAB43843.1| transcription factor-like protein [Arabidopsis thaliana]
 gi|7269908|emb|CAB81001.1| transcription factor-like protein [Arabidopsis thaliana]
          Length = 653

 Score =  265 bits (677), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 161/415 (38%), Positives = 225/415 (54%), Gaps = 66/415 (15%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G  K L+ +LWHACAG +V +P + ++V YFPQGH+E      +        N P +PP 
Sbjct: 11  GTEKGLDPQLWHACAGGMVRMPPMNSKVFYFPQGHAENAYDCVD------FGNLP-IPPM 63

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGI--------PSKQPTNY 114
           ++C++  +   AD E+DEV+A++ L PL    + D +V  E G          + + T  
Sbjct: 64  VLCRVLAIKYMADAESDEVFAKLRLIPL----KDDEYVDHEYGDGEDSNGFESNSEKTPS 119

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F KTLT SD +  GGFSVPR  AE +FP LD++ +PP Q ++A+D+H   WKFRHI+RG 
Sbjct: 120 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRHIYRGT 179

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR---------------- 218
           P+RHLLTTGWS FV+ K+LVAGDS++F+  E   L +GIRRA R                
Sbjct: 180 PRRHLLTTGWSNFVNQKKLVAGDSIVFMRAENGDLCVGIRRAKRGGIGNGPEYSAGWNPI 239

Query: 219 PPTVMPSSVLSSDSMH------------IGLLAA-----AAHAAATNSCFTVFFNPRASP 261
             +   SS+L  D  +             G + A     AA  A +   F V + PRAS 
Sbjct: 240 GGSCGYSSLLREDESNSLRRSNCSLADRKGKVTAESVIEAATLAISGRPFEVVYYPRAST 299

Query: 262 SEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHW 320
           SEF +      +A        GMRF+M FETE+SS +  +MGT++ ++  DP+RW NS W
Sbjct: 300 SEFCVKALD-ARAAMRIPWCSGMRFKMAFETEDSSRISWFMGTVSAVNVSDPIRWPNSPW 358

Query: 321 RSVKVGWDESTAGERQPRVSLWEIE--------PLTTFPMYPSLFPLRLKRPWHP 367
           R ++V WDE    +   RV+ W +E        PLT+F   P    +RL  P HP
Sbjct: 359 RLLQVAWDEPDLLQNVKRVNPWLVELVSNVHPIPLTSFS--PPRKKMRL--PQHP 409


>gi|18417527|ref|NP_567841.1| auxin response factor 16 [Arabidopsis thaliana]
 gi|46576629|sp|Q93YR9.1|ARFP_ARATH RecName: Full=Auxin response factor 16
 gi|16604695|gb|AAL24140.1| putative transcription factor [Arabidopsis thaliana]
 gi|20259589|gb|AAM14137.1| putative transcription factor [Arabidopsis thaliana]
 gi|332660318|gb|AEE85718.1| auxin response factor 16 [Arabidopsis thaliana]
          Length = 670

 Score =  265 bits (677), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 161/415 (38%), Positives = 225/415 (54%), Gaps = 66/415 (15%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G  K L+ +LWHACAG +V +P + ++V YFPQGH+E      +        N P +PP 
Sbjct: 11  GTEKGLDPQLWHACAGGMVRMPPMNSKVFYFPQGHAENAYDCVD------FGNLP-IPPM 63

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGI--------PSKQPTNY 114
           ++C++  +   AD E+DEV+A++ L PL    + D +V  E G          + + T  
Sbjct: 64  VLCRVLAIKYMADAESDEVFAKLRLIPL----KDDEYVDHEYGDGEDSNGFESNSEKTPS 119

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F KTLT SD +  GGFSVPR  AE +FP LD++ +PP Q ++A+D+H   WKFRHI+RG 
Sbjct: 120 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRHIYRGT 179

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR---------------- 218
           P+RHLLTTGWS FV+ K+LVAGDS++F+  E   L +GIRRA R                
Sbjct: 180 PRRHLLTTGWSNFVNQKKLVAGDSIVFMRAENGDLCVGIRRAKRGGIGNGPEYSAGWNPI 239

Query: 219 PPTVMPSSVLSSDSMH------------IGLLAA-----AAHAAATNSCFTVFFNPRASP 261
             +   SS+L  D  +             G + A     AA  A +   F V + PRAS 
Sbjct: 240 GGSCGYSSLLREDESNSLRRSNCSLADRKGKVTAESVIEAATLAISGRPFEVVYYPRAST 299

Query: 262 SEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHW 320
           SEF +      +A        GMRF+M FETE+SS +  +MGT++ ++  DP+RW NS W
Sbjct: 300 SEFCVKALD-ARAAMRIPWCSGMRFKMAFETEDSSRISWFMGTVSAVNVSDPIRWPNSPW 358

Query: 321 RSVKVGWDESTAGERQPRVSLWEIE--------PLTTFPMYPSLFPLRLKRPWHP 367
           R ++V WDE    +   RV+ W +E        PLT+F   P    +RL  P HP
Sbjct: 359 RLLQVAWDEPDLLQNVKRVNPWLVELVSNVHPIPLTSFS--PPRKKMRL--PQHP 409



 Score = 42.4 bits (98), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 14/94 (14%)

Query: 682 VKVY-KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 740
            KV+ +S  VGR+LD+S   SY EL  +L  MFGI  K  + L S   +++ D    +  
Sbjct: 587 CKVFMESDDVGRTLDLSVLGSYEELSRKLSDMFGI--KKSEMLSS---VLYRDASGAIKY 641

Query: 741 LGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVES 774
            G++P+  F+     + IL+        EQG ES
Sbjct: 642 AGNEPFSEFLKTARRLTILT--------EQGSES 667


>gi|12323853|gb|AAG51894.1|AC023913_2 auxin response factor, putative; 53188-50111 [Arabidopsis thaliana]
          Length = 600

 Score =  265 bits (676), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 145/350 (41%), Positives = 212/350 (60%), Gaps = 19/350 (5%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G    +  +LW  CAGPL  +P +G ++ YFPQG+ E V A+T +E++   P   +LP +
Sbjct: 19  GSKSYMYEQLWKLCAGPLCDIPKLGEKIYYFPQGNIELVEASTREELNELKP-ICDLPSK 77

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQP-----LSPEEQKDTFVPIELGIPSKQPTNYFCK 117
           L C++  + +  +  +DE YA++TL P     + P + ++ F P+          N F K
Sbjct: 78  LQCRVIAIQLKVENNSDETYAEITLMPDTTQVVIPTQNENQFRPL---------VNSFTK 128

Query: 118 TLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKR 177
            LTASDTS  GGF VP++ A +  P LD S   P QEL+A DLH  +W+F H +RG P+R
Sbjct: 129 VLTASDTS--GGFFVPKKHAIECLPPLDMSQPLPTQELLATDLHGNQWRFNHNYRGTPQR 186

Query: 178 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGL 237
           HLLTTGW+ F ++K+LVAGD ++F+  E  +L +GIRRA      +PSS++S +SM  G+
Sbjct: 187 HLLTTGWNAFTTSKKLVAGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIISIESMRHGV 246

Query: 238 LAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSV 297
           +A+A HA      F V + P    S+F++   K++ AV + + +VG RF M FE ++ S 
Sbjct: 247 IASAKHAFDNQCMFIVVYKPSIRSSQFIVSYDKFLDAV-NNKFNVGSRFTMRFEGDDFSE 305

Query: 298 RRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 347
           RRY GTI G+SD  P  W  S WR+++V WDE  +  R  +VS WEIE L
Sbjct: 306 RRYFGTIIGVSDFSP-HWKCSEWRNLEVQWDEFASFSRPNKVSPWEIEHL 354



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 85/170 (50%), Gaps = 17/170 (10%)

Query: 592 SYNGKDAAVGTENCNTDS-QNSVVFGVHIDSSGLLLPTTVSSFTTSVDPGVSSMPLGDSG 650
           +YN +      EN  T +  N  +FGV      L+ P+ +      +   +S +  G   
Sbjct: 436 NYNNQMVTQIEENITTKTGTNFRLFGV-----SLVTPSVIKDPIEEIGSEISKLTEGKK- 489

Query: 651 FHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREEL 709
           F  S    ++  +E+     Q  Q + TRT  KV   G ++ R++D+S  + Y++L  EL
Sbjct: 490 FGQSQ--TLRSPTEI-----QSKQFSSTRTCTKVQMQGVTIERAVDLSVLNGYDQLILEL 542

Query: 710 GQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKIL 759
            ++F ++G+ +   R+ W++ F D ++D +L+GDDPW  F + V  I I 
Sbjct: 543 EELFDLKGQLQT--RNQWEIAFTDSDDDKMLVGDDPWPEFCNMVKKILIF 590


>gi|259490000|ref|NP_001159132.1| uncharacterized protein LOC100304210 [Zea mays]
 gi|223942161|gb|ACN25164.1| unknown [Zea mays]
 gi|295844278|gb|ADG43136.1| auxin response factor 2 [Zea mays]
 gi|407232686|gb|AFT82685.1| ARF2 ARF type transcription factor, partial [Zea mays subsp. mays]
 gi|414871040|tpg|DAA49597.1| TPA: auxin response factor 2 [Zea mays]
          Length = 681

 Score =  265 bits (676), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 155/405 (38%), Positives = 220/405 (54%), Gaps = 46/405 (11%)

Query: 2   IGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 61
           + + +CL+ +LWHACAG +V +P V +RV YFPQGH+E        ++         LP 
Sbjct: 4   VAEERCLDPQLWHACAGGMVQMPPVRSRVYYFPQGHAEHAHGGGAADLAGAR----ALPS 59

Query: 62  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP---SKQPTNYFCKT 118
            ++C +  V   AD ETDEV+A++ L P++P E  +   P E  +    +++  + F KT
Sbjct: 60  LVLCSVTGVRFLADPETDEVFAKIRLVPVAPGEV-EFREPDEFSVDPADAREKLSSFAKT 118

Query: 119 LTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRH 178
           LT SD +  GGFSVPR  AE +FP LD+   PP Q ++A+D+H   WKFRHI+RG P+RH
Sbjct: 119 LTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIYRGTPRRH 178

Query: 179 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR--------------PPTVMP 224
           LLTTGWS FV+ K+LVAGDS++F+  E  +L +GIRR  R              P     
Sbjct: 179 LLTTGWSTFVNQKKLVAGDSIVFLRTEHGELCVGIRRVKRVSCGGMECMSGWNAPGYGAL 238

Query: 225 SSVLSSD----------------SMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPL 268
           S+ L  +                 + I  +  AA  AA+   F V + PRAS  EFV+  
Sbjct: 239 SAFLKDEEGKMMKSHGGYMRGRGKVKITDVVNAASLAASGQPFEVVYYPRASTPEFVVKA 298

Query: 269 TKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVGW 327
              V+     +   GMRF+M FETE+SS +  +MGTI      DP+RW NS WR ++V W
Sbjct: 299 AS-VQNAMRNQWCPGMRFKMAFETEDSSRISWFMGTIASAQVADPIRWPNSPWRLLQVAW 357

Query: 328 DESTAGERQPRVSLWEIEPLTTFPMYPSLFPL-----RLKRPWHP 367
           DE    +    V+ W +E +++ P    L P      +L+ P HP
Sbjct: 358 DEPDLLQNVKCVNPWLVEIVSSIPPI-HLGPFSPPRKKLRVPHHP 401


>gi|62633605|gb|AAX89755.1| putative auxin response factor 10 [Gossypium raimondii]
          Length = 417

 Score =  265 bits (676), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 147/345 (42%), Positives = 202/345 (58%), Gaps = 32/345 (9%)

Query: 1   MIGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLP 60
           M   +K L+ +LWHACAGP+V +P + ++V YFPQGH+E   A  +       P+ P +P
Sbjct: 1   MKESDKSLDPQLWHACAGPMVQIPPLNSKVFYFPQGHAEHSLAAVD------FPSSPPVP 54

Query: 61  PQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLT 120
             ++C++ ++   AD ETDEVYA++ L PL   E     V +     +++P + F KTLT
Sbjct: 55  ALVLCRVASLKFMADTETDEVYAKILLMPLPNTELDLEHVAVFGSDNAEKPAS-FAKTLT 113

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
            SD +  GGFSVPR  AE +FP LD++  PP Q ++A D+H   WKFRHI+RG P+RHLL
Sbjct: 114 QSDANNGGGFSVPRYCAETIFPPLDYTEDPPVQTVVAVDVHGETWKFRHIYRGTPRRHLL 173

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPS------SVLSSDSMH 234
           TTGWS FV+ K+LVAGDS++F+ +E   L +GIRRA R     P       S L  D   
Sbjct: 174 TTGWSTFVNHKKLVAGDSIVFLRSENGGLCVGIRRAKRGTGNGPEAGSPFLSFLREDESK 233

Query: 235 I------------GLLAA-----AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFH 277
           +            G L A     AA  AA+   F V + PRAS  EF +  +  VKA   
Sbjct: 234 MMMMNRNGDWRGKGKLKAEAVLQAATLAASGQPFEVVYYPRASTPEFCVKASS-VKAAMR 292

Query: 278 TRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWR 321
                GMRF+M FETE+SS +  +MGT++ +  +DP+RW NS WR
Sbjct: 293 VPWCCGMRFKMAFETEDSSRISWFMGTVSSVQVVDPIRWPNSPWR 337


>gi|227202766|dbj|BAH56856.1| AT4G23980 [Arabidopsis thaliana]
          Length = 297

 Score =  265 bits (676), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 146/290 (50%), Positives = 198/290 (68%), Gaps = 21/290 (7%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNK-EVDSHIPNYPNLPPQLICQ 66
           L  ELW  CAGPLV +P    RV YFPQGH EQ+ A+T + ++++  P +  LPP+++C 
Sbjct: 9   LYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLF-VLPPKILCN 67

Query: 67  LHNVTMHADVETDEVYAQMTL--------QPLSPEEQKDTFVPIELGIPSKQPTNYFCKT 118
           + NV++ A+ +TDEVYAQ+TL        +P+SP+       P EL  P     + F K 
Sbjct: 68  VMNVSLQAEKDTDEVYAQITLIPVGTEVDEPMSPDPS-----PPELQRPK---VHSFSKV 119

Query: 119 LTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRH 178
           LTASDTSTHGGFSV R+ A +  P LD + Q P QEL+A D+H  +WKF+HIFRGQP+RH
Sbjct: 120 LTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRH 179

Query: 179 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLL 238
           LLTTGWS FV++KRLVAGD+ +F+  E  +L +G+RRA    + MPSSV+SS SMH+G+L
Sbjct: 180 LLTTGWSTFVTSKRLVAGDTFVFLRGENGELRVGVRRANLQQSSMPSSVISSHSMHLGVL 239

Query: 239 AAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM 288
           A A HA  T + F V++ PR   S+F+I L KY++A+   + SVGMRF+M
Sbjct: 240 ATARHATQTKTMFIVYYKPRT--SQFIISLNKYLEAM-SNKFSVGMRFKM 286


>gi|449456014|ref|XP_004145745.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
 gi|449531181|ref|XP_004172566.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
          Length = 716

 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 170/461 (36%), Positives = 232/461 (50%), Gaps = 77/461 (16%)

Query: 6   KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 65
           K L+ +LWHACAG +V +P + ++V YFPQGH+E   AT +      IP      P + C
Sbjct: 6   KILDPQLWHACAGGMVQMPAINSKVFYFPQGHAEHAQATVDFTSSLRIP------PLIPC 59

Query: 66  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTN------YFCKTL 119
           ++  V   AD+ETDEV+A + + PL      D     E G  S    N       F KTL
Sbjct: 60  RVLAVKFLADLETDEVFANVRMVPL---PNSDLNFEEEGGFGSSGSENNMEKPASFAKTL 116

Query: 120 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 179
           T SD +  GGFSVPR  AE +FP LD++  PP Q +IA+D+H   WKFRHI+RG P+RHL
Sbjct: 117 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVIAKDVHGEVWKFRHIYRGTPRRHL 176

Query: 180 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR--------------------P 219
           LTTGWS FV+ K+LVAGDS++F+ ++   L +GIRRA R                    P
Sbjct: 177 LTTGWSTFVNQKKLVAGDSIVFLRSKNGDLCVGIRRAKRAIGCASDHPYGWNPGGGNCIP 236

Query: 220 PTVMPSSVLSSDSMHIGL-----------------------LAAAAHAAATNSCFTVFFN 256
           P    +  L  D   +                         +  AA  AA+   F V + 
Sbjct: 237 PYGGLTMFLRDDDNKLSRKGSLSSSGSGGNLRGKGKVRPESVMEAAALAASGQPFEVVYY 296

Query: 257 PRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRW 315
           PRAS  EF +  +  V+A    +   GMRF+M FETE+SS +  +MGTI+ +   DP+RW
Sbjct: 297 PRASTPEFCVKASS-VRAAMRIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVADPIRW 355

Query: 316 SNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL-----RLKRPWHPS-- 368
            NS WR ++V WDE    +   RVS W +E ++  P+   L P      + + P HP   
Sbjct: 356 PNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVI-QLSPFSPPRKKFRLPQHPDFP 414

Query: 369 -------TSSFNDNRDETASGLNWLRGGT--GEQGLTTLNF 400
                  +SSF+ N    +S +  L   T  G QG     F
Sbjct: 415 LDSQFPLSSSFSSNTLRPSSPMCCLSDNTSVGIQGARHTQF 455



 Score = 44.3 bits (103), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 6/89 (6%)

Query: 682 VKVY-KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 740
            KV+ +S  VGR+L++S  SSY EL   L  MFG+E    D L     +++ D    V  
Sbjct: 607 CKVFMESEDVGRTLNLSVISSYEELYRRLANMFGMEK--PDILS---HVLYQDATGAVKQ 661

Query: 741 LGDDPWEAFVSNVWYIKILSPEDVQKMGE 769
            GD P+  F+     + IL+     K+G 
Sbjct: 662 AGDKPFSDFIKTARRLTILTDSGSDKLGR 690


>gi|295844312|gb|ADG43153.1| auxin response factor 19 [Zea mays]
 gi|413934598|gb|AFW69149.1| hypothetical protein ZEAMMB73_407032 [Zea mays]
          Length = 716

 Score =  264 bits (674), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 150/393 (38%), Positives = 208/393 (52%), Gaps = 54/393 (13%)

Query: 5   NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLI 64
           ++CL+ +LWHACAG +V +P V ++V YFPQGH+E      +            +P  ++
Sbjct: 8   DRCLDPQLWHACAGGMVQMPAVHSKVYYFPQGHAEHAQGPVDLPAG-------RVPALVL 60

Query: 65  CQLHNVTMHADVETDEVYAQMTLQPLSPEE----QKDTFVPIELGIPSKQPTNYFCKTLT 120
           C++  V   AD +TDEV+A++ L P+ P E              G    +P + F KTLT
Sbjct: 61  CRVAAVRFMADPDTDEVFAKIRLAPVRPNEPGYADDAIGAAAASGAQEDKPAS-FAKTLT 119

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
            SD +  GGFSVPR  AE +FP LD+S  PP Q ++A+D+H V WKFRHI+RG P+RHLL
Sbjct: 120 QSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLL 179

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA----IRPPTVMPSSVLSSDSMHIG 236
           TTGWS FV+ K+LVAGDS++F+  E   L +GIRRA    I  P  M            G
Sbjct: 180 TTGWSTFVNQKKLVAGDSIVFMRTENGDLCVGIRRAKKGGIGGPEFMHHHHQQPPPPQGG 239

Query: 237 LLAA------------------------------------AAHAAATNSCFTVFFNPRAS 260
             A                                     AA+ A +   F V + PRAS
Sbjct: 240 GYAGFSMFLRGEEDGGKMMAAAATRGKAARVRVRPEEVVEAANLAVSGQPFEVVYYPRAS 299

Query: 261 PSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSH 319
             EF +     V+A   T+   GMRF+M FETE+SS +  +MGT++ +   DP+RW NS 
Sbjct: 300 TPEFCVK-AGAVRAAMRTQWCPGMRFKMAFETEDSSRISWFMGTVSAVHVADPIRWPNSP 358

Query: 320 WRSVKVGWDESTAGERQPRVSLWEIEPLTTFPM 352
           WR ++V WDE    +   RVS W +E ++  P+
Sbjct: 359 WRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPV 391



 Score = 42.0 bits (97), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 59/136 (43%), Gaps = 11/136 (8%)

Query: 629 TVSSFTTSVDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVY-KS 687
           TVS+   S  PG S+     SG   +   C Q+        G  D L       KV+ +S
Sbjct: 583 TVSNSDVS-SPGRSNQDGTSSGGGPAARACWQEEECNNRAAGSEDDLL---GHCKVFMQS 638

Query: 688 GSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLL-GDDPW 746
             VGR+LD+S  +SY EL + L  MFG+     D       + + D  +  L   GD+P+
Sbjct: 639 EDVGRTLDLSAVASYEELYQRLADMFGV-----DKAELTSHVFYRDDASGALKHPGDEPF 693

Query: 747 EAFVSNVWYIKILSPE 762
             F      + IL+ E
Sbjct: 694 SEFTKTARRLTILTDE 709


>gi|79356673|ref|NP_174699.2| auxin response factor 22 [Arabidopsis thaliana]
 gi|46576638|sp|Q9C8N7.2|ARFV_ARATH RecName: Full=Auxin response factor 22
 gi|49616367|gb|AAT67080.1| ARF22 [Arabidopsis thaliana]
 gi|332193587|gb|AEE31708.1| auxin response factor 22 [Arabidopsis thaliana]
          Length = 598

 Score =  264 bits (674), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 146/350 (41%), Positives = 214/350 (61%), Gaps = 21/350 (6%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G    +  +LW  CAGPL  +P +G ++ YFPQG+ E V A+T +E++   P   +LP +
Sbjct: 19  GSKSYMYEQLWKLCAGPLCDIPKLGEKIYYFPQGNIELVEASTREELNELKP-ICDLPSK 77

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQP-----LSPEEQKDTFVPIELGIPSKQPTNYFCK 117
           L C++  + +  +  +DE YA++TL P     + P + ++ F P+          N F K
Sbjct: 78  LQCRVIAIQLKVENNSDETYAEITLMPDTTQVVIPTQNENQFRPL---------VNSFTK 128

Query: 118 TLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKR 177
            LTASDTS  GGF VP++ A +  P LD S   P QEL+A DLH  +W+F H +RG P+R
Sbjct: 129 VLTASDTS--GGFFVPKKHAIECLPPLDMSQPLPTQELLATDLHGNQWRFNHNYRGTPQR 186

Query: 178 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGL 237
           HLLTTGW+ F ++K+LVAGD ++F+  E  +L +GIRRA      +PSS++S +SM  G+
Sbjct: 187 HLLTTGWNAFTTSKKLVAGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIISIESMRHGV 246

Query: 238 LAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSV 297
           +A+A HA      F V + PR+  S+F++   K++ AV + + +VG RF M FE ++ S 
Sbjct: 247 IASAKHAFDNQCMFIVVYKPRS--SQFIVSYDKFLDAV-NNKFNVGSRFTMRFEGDDFSE 303

Query: 298 RRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 347
           RRY GTI G+SD  P  W  S WR+++V WDE  +  R  +VS WEIE L
Sbjct: 304 RRYFGTIIGVSDFSP-HWKCSEWRNLEVQWDEFASFSRPNKVSPWEIEHL 352



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 85/170 (50%), Gaps = 17/170 (10%)

Query: 592 SYNGKDAAVGTENCNTDS-QNSVVFGVHIDSSGLLLPTTVSSFTTSVDPGVSSMPLGDSG 650
           +YN +      EN  T +  N  +FGV      L+ P+ +      +   +S +  G   
Sbjct: 434 NYNNQMVTQIEENITTKTGTNFRLFGV-----SLVTPSVIKDPIEEIGSEISKLTEGKK- 487

Query: 651 FHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREEL 709
           F  S    ++  +E+     Q  Q + TRT  KV   G ++ R++D+S  + Y++L  EL
Sbjct: 488 FGQSQ--TLRSPTEI-----QSKQFSSTRTCTKVQMQGVTIERAVDLSVLNGYDQLILEL 540

Query: 710 GQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKIL 759
            ++F ++G+ +   R+ W++ F D ++D +L+GDDPW  F + V  I I 
Sbjct: 541 EELFDLKGQLQT--RNQWEIAFTDSDDDKMLVGDDPWPEFCNMVKKILIF 588


>gi|224132500|ref|XP_002328300.1| predicted protein [Populus trichocarpa]
 gi|222837815|gb|EEE76180.1| predicted protein [Populus trichocarpa]
          Length = 708

 Score =  264 bits (674), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 157/392 (40%), Positives = 212/392 (54%), Gaps = 54/392 (13%)

Query: 4   DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQL 63
           D K L+ +LW ACAG +V +P + T+V YFPQGH+E     +   VD     +P   P L
Sbjct: 5   DKKSLDPQLWQACAGSMVQIPPLNTKVFYFPQGHAEH----SQSPVD-----FPQRIPSL 55

Query: 64  I-CQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNY-----FCK 117
           + C++ +V   AD  TDEV+A+++L PL P+   D    +++        N      F K
Sbjct: 56  VLCRVASVKFLADPGTDEVFAKISLVPL-PDADLDISQDVDICGDGNDSNNAEKPASFAK 114

Query: 118 TLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKR 177
           TLT SD +  GGFSVPR  AE +FP LD+S  PP Q LIA+D+H   WKFRHI+RG P+R
Sbjct: 115 TLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTLIAKDVHGEVWKFRHIYRGTPRR 174

Query: 178 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR------PPTVMPSSV---- 227
           HLLTTGWS FV+ K+LVAGDS++F+  E   L +GIRRA R       P   PS +    
Sbjct: 175 HLLTTGWSTFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKRGVGIGSGPESSPSHIGWNS 234

Query: 228 ---------------LSSDSMHIGLLAA-----------AAHAAATNSCFTVFFNPRASP 261
                          +  D M  G +             AA  AA  + F V + PRAS 
Sbjct: 235 NNATSANPYGGFSLSVKEDEMRNGGVKGRGRVKSEEVLEAAGLAANGNPFQVVYYPRAST 294

Query: 262 SEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHW 320
            EF +  +  V+A   T    GMRF+M FETE+SS +  +MGT+  +   DP RW NS W
Sbjct: 295 PEFCVKASS-VRAAMRTCWCSGMRFKMAFETEDSSRISWFMGTVASVQVADPDRWPNSPW 353

Query: 321 RSVKVGWDESTAGERQPRVSLWEIEPLTTFPM 352
           R ++V WDE    +    VS W +E ++  P+
Sbjct: 354 RLLQVTWDEPDLLQTVKCVSPWLVELVSNMPV 385



 Score = 44.7 bits (104), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 5/74 (6%)

Query: 686 KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDP 745
           +S  +GR+LD+S   SY ELR +L  MFGIE    D L     +++ D    V  +GD+P
Sbjct: 602 ESEDLGRTLDLSALHSYEELRRKLAIMFGIER--SDMLS---HVLYRDVTGAVKQIGDEP 656

Query: 746 WEAFVSNVWYIKIL 759
           +  F+     + IL
Sbjct: 657 FSVFMKTAKRLTIL 670


>gi|206572097|gb|ACI13681.1| putative auxin response factor ARF16 [Malus x domestica]
          Length = 702

 Score =  264 bits (674), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 168/475 (35%), Positives = 235/475 (49%), Gaps = 80/475 (16%)

Query: 5   NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLI 64
           ++CL+ +LWHACAG +V +P V  +V YFPQGH+E      +        N P +P  ++
Sbjct: 15  DRCLDPQLWHACAGGMVQMPPVNAKVFYFPQGHAEHACGPVD------FRNCPRVPAHIL 68

Query: 65  CQLHNVTMHADVETDEVYAQMTLQPLSPEEQ--KDTFVPIELGIPSKQPTNYFCKTLTAS 122
           C++  +   AD  TDEVYA++ L PL+  E   +D  +    G  +      F KTLT S
Sbjct: 69  CRVAAIKFMADPGTDEVYAKIRLVPLNGAEAGYEDDGIGGLNGTETPDKPASFAKTLTQS 128

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           D +  GGFSVPR  AE +FP LD+S  PP Q ++A+D+H   WKFRHI+RG P+RHLLTT
Sbjct: 129 DANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRGTPRRHLLTT 188

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRP--------------------PTV 222
           G S FV+ K+LV+GDS++F+  E   L +GIRRA R                     P  
Sbjct: 189 GSSTFVNHKKLVSGDSIVFLRAENGDLCVGIRRAKRGIGGGSESSSGWNPMGGNCTVPYG 248

Query: 223 MPSSVLSSDSMHI------------GLLAA-----------AAHAAATNSCFTVFFNPRA 259
             S+ L  D   +            G L             AA  AA    F V + PRA
Sbjct: 249 GFSAFLREDENKLMKNGHGNGSNSNGSLMGKGKVGPESVFEAATLAANGQPFEVVYYPRA 308

Query: 260 SPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNS 318
           S  EF +  +  VKA    R   GMRF+M FETE+SS +  +MGTI+ +   +P+RW  S
Sbjct: 309 STPEFCVKAS-LVKAALQIRWCPGMRFKMAFETEDSSRISWFMGTISSVQVAEPLRWPES 367

Query: 319 HWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL-----RLKRPWHPS----- 368
            WR ++V WDE    +   RVS W +E ++  P    L P      +++ P HP      
Sbjct: 368 PWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPAI-HLTPFSPPRKKMRLPQHPDFPFEG 426

Query: 369 --------------TSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSL--GMFP 407
                         +S F    D+T +G+   R       L+ ++   L  G+FP
Sbjct: 427 QLPMPTFSGNLLGPSSPFGCLPDKTPAGMQGARHAHYGLSLSDMHLNKLHTGLFP 481


>gi|75261833|sp|Q9AV47.1|ARFV_ORYSJ RecName: Full=Auxin response factor 22
 gi|13384374|gb|AAK21342.1|AC024594_6 putative transcription factor [Oryza sativa Japonica Group]
          Length = 698

 Score =  264 bits (674), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 155/409 (37%), Positives = 221/409 (54%), Gaps = 48/409 (11%)

Query: 6   KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 65
           +CL+ +LWHACAG +V +P   +RV YF QGH+E           +       LPP ++C
Sbjct: 11  RCLDPQLWHACAGGMVQMPAPRSRVYYFAQGHAEHADGGGGAAAAAAELGPRALPPLVLC 70

Query: 66  QLHNVTMHADVETDEVYAQMTLQPLSPEE----QKDTFVPI----ELGIPSKQPTNYFCK 117
           ++  V   AD ++DEVYA++ L P++P E    + D   P+    +   PS +    F K
Sbjct: 71  RVEGVQFLADRDSDEVYAKIRLAPVAPGEAEFREPDELCPLGAAGDAAEPSPEKPTSFAK 130

Query: 118 TLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKR 177
           TLT SD +  GGFSVPR  AE +FP LD+   PP Q ++A+D+H V WKFRHI+RG P+R
Sbjct: 131 TLTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGVVWKFRHIYRGTPRR 190

Query: 178 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPT----VMP--------- 224
           HLLTTGWS FV+ K+LVAGDS++F+     +L +GIRRA R        M          
Sbjct: 191 HLLTTGWSTFVNQKKLVAGDSIVFLRTRHGELCVGIRRAKRMACGGMECMSGWNAPGYGG 250

Query: 225 ---SSVLSSDS------------------MHIGLLAAAAHAAATNSCFTVFFNPRASPSE 263
              S+ L  +                   + +  +  AA  A++   F V + PRAS  +
Sbjct: 251 GGFSAFLKEEESKLMKGHGGGGYMKGKGKVRMADVVEAASLASSGQPFEVAYYPRASTPD 310

Query: 264 FVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRS 322
           FV+     V+A    +   GMRF+M FETE+SS +  +MGTI+ +   DP RW NS WR 
Sbjct: 311 FVVKAAS-VQAAMRIQWCSGMRFKMAFETEDSSRISWFMGTISSVQVADPNRWPNSPWRL 369

Query: 323 VKVGWDESTAGERQPRVSLWEIEPLTTFP---MYPSLFPL-RLKRPWHP 367
           ++V WDE    +    VS W +E +++ P   + P   P  +L+ P HP
Sbjct: 370 LQVTWDEPDLLQNVKCVSPWLVELVSSIPPIHLGPFSSPRKKLRVPPHP 418


>gi|242093966|ref|XP_002437473.1| hypothetical protein SORBIDRAFT_10g027790 [Sorghum bicolor]
 gi|241915696|gb|EER88840.1| hypothetical protein SORBIDRAFT_10g027790 [Sorghum bicolor]
          Length = 709

 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 153/405 (37%), Positives = 215/405 (53%), Gaps = 58/405 (14%)

Query: 5   NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLI 64
           ++CL+ +LWHACAG +V +P V ++V YFPQGH+E         VD      P L   ++
Sbjct: 17  DRCLDPQLWHACAGGMVQMPPVHSKVYYFPQGHAEHAQGPV---VDLPAGRVPAL---VL 70

Query: 65  CQLHNVTMHADVETDEVYAQMTLQPLSPEE--------QKDTFVPIELGIPSKQPTNYFC 116
           C++  V   AD +TDEV+A++ L P+ P E                  G    +P + F 
Sbjct: 71  CRVAAVRFMADPDTDEVFAKIRLAPVRPNEPGYAADADDAIGAAAAGGGAQEDKPAS-FA 129

Query: 117 KTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPK 176
           KTLT SD +  GGFSVPR  AE +FP LD+S  PP Q ++A+D+H V WKFRHI+RG P+
Sbjct: 130 KTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPR 189

Query: 177 RHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMP------------ 224
           RHLLTTGWS FV+ K+LVAGDS++F+  E   L +GIRRA +     P            
Sbjct: 190 RHLLTTGWSTFVNQKKLVAGDSIVFMRTENGDLCVGIRRAKKGGIGGPEFLHHHQPPPPP 249

Query: 225 -------------------SSVLSSDSMHIG----------LLAAAAHAAATNSCFTVFF 255
                              S ++++ +   G           +  AA+ A +   F V +
Sbjct: 250 GGGGYAGFSMFLRGGEEDGSKMMATGAATRGNKVRVRVRPEEVVEAANLAVSGQPFEVVY 309

Query: 256 NPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVR 314
            PRAS  EF +     V+A   T+   GMRF+M FETE+SS +  +MGT++ +   DP+R
Sbjct: 310 YPRASTPEFCVK-AGAVRAAMRTQWCAGMRFKMAFETEDSSRISWFMGTVSAVQVADPIR 368

Query: 315 WSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL 359
           W NS WR ++V WDE    +   RVS W +E ++  P    L P 
Sbjct: 369 WPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPAIHHLTPF 413


>gi|110289274|gb|AAP54297.2| Auxin response factor 16, putative, expressed [Oryza sativa
           Japonica Group]
 gi|222613018|gb|EEE51150.1| hypothetical protein OsJ_31911 [Oryza sativa Japonica Group]
          Length = 760

 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 155/409 (37%), Positives = 221/409 (54%), Gaps = 48/409 (11%)

Query: 6   KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 65
           +CL+ +LWHACAG +V +P   +RV YF QGH+E           +       LPP ++C
Sbjct: 73  RCLDPQLWHACAGGMVQMPAPRSRVYYFAQGHAEHADGGGGAAAAAAELGPRALPPLVLC 132

Query: 66  QLHNVTMHADVETDEVYAQMTLQPLSPEE----QKDTFVPI----ELGIPSKQPTNYFCK 117
           ++  V   AD ++DEVYA++ L P++P E    + D   P+    +   PS +    F K
Sbjct: 133 RVEGVQFLADRDSDEVYAKIRLAPVAPGEAEFREPDELCPLGAAGDAAEPSPEKPTSFAK 192

Query: 118 TLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKR 177
           TLT SD +  GGFSVPR  AE +FP LD+   PP Q ++A+D+H V WKFRHI+RG P+R
Sbjct: 193 TLTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGVVWKFRHIYRGTPRR 252

Query: 178 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPT----VMP--------- 224
           HLLTTGWS FV+ K+LVAGDS++F+     +L +GIRRA R        M          
Sbjct: 253 HLLTTGWSTFVNQKKLVAGDSIVFLRTRHGELCVGIRRAKRMACGGMECMSGWNAPGYGG 312

Query: 225 ---SSVLSSDS------------------MHIGLLAAAAHAAATNSCFTVFFNPRASPSE 263
              S+ L  +                   + +  +  AA  A++   F V + PRAS  +
Sbjct: 313 GGFSAFLKEEESKLMKGHGGGGYMKGKGKVRMADVVEAASLASSGQPFEVAYYPRASTPD 372

Query: 264 FVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRS 322
           FV+     V+A    +   GMRF+M FETE+SS +  +MGTI+ +   DP RW NS WR 
Sbjct: 373 FVVKAAS-VQAAMRIQWCSGMRFKMAFETEDSSRISWFMGTISSVQVADPNRWPNSPWRL 431

Query: 323 VKVGWDESTAGERQPRVSLWEIEPLTTFP---MYPSLFPL-RLKRPWHP 367
           ++V WDE    +    VS W +E +++ P   + P   P  +L+ P HP
Sbjct: 432 LQVTWDEPDLLQNVKCVSPWLVELVSSIPPIHLGPFSSPRKKLRVPPHP 480


>gi|218184755|gb|EEC67182.1| hypothetical protein OsI_34050 [Oryza sativa Indica Group]
          Length = 690

 Score =  263 bits (672), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 149/389 (38%), Positives = 212/389 (54%), Gaps = 44/389 (11%)

Query: 6   KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 65
           +CL+ +LWHACAG +V +P   +RV YF QGH+E           +       LPP ++C
Sbjct: 31  RCLDPQLWHACAGGMVQMPAPRSRVYYFAQGHAEHADGGGGAAAAAAELGPRALPPLVLC 90

Query: 66  QLHNVTMHADVETDEVYAQMTLQPLSPEE----QKDTFVPI----ELGIPSKQPTNYFCK 117
           ++  V   AD ++DEVYA++ L P++P E    + D   P+    +   PS +    F K
Sbjct: 91  RVEGVQFLADRDSDEVYAKIRLAPVAPGEAEFREPDELCPLGAAGDAAEPSPEKPTSFAK 150

Query: 118 TLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKR 177
           TLT SD +  GGFSVPR  AE +FP LD+   PP Q ++A+D+H V WKFRHI+RG P+R
Sbjct: 151 TLTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGVVWKFRHIYRGTPRR 210

Query: 178 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPT----VMP--------- 224
           HLLTTGWS FV+ K+LVAGDS++F+     +L +GIRRA R        M          
Sbjct: 211 HLLTTGWSTFVNQKKLVAGDSIVFLRTRHGELCVGIRRAKRMACGGMECMSGWNAPGYGG 270

Query: 225 ---SSVLSSDS------------------MHIGLLAAAAHAAATNSCFTVFFNPRASPSE 263
              S+ L  +                   + +  +  AA  A++   F V + PRAS  +
Sbjct: 271 GGFSAFLKEEESKLMKGHGGGGYMKGKGKVRMADVVEAASLASSGQPFEVAYYPRASTPD 330

Query: 264 FVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRS 322
           FV+     V+A    +   GMRF+M FETE+SS +  +MGTI+ +   DP RW NS WR 
Sbjct: 331 FVVKAAS-VQAAMRIQWCSGMRFKMAFETEDSSRISWFMGTISSVQVADPNRWPNSPWRL 389

Query: 323 VKVGWDESTAGERQPRVSLWEIEPLTTFP 351
           ++V WDE    +    VS W +E +++ P
Sbjct: 390 LQVTWDEPDLLQNVKCVSPWLVELVSSIP 418


>gi|224140191|ref|XP_002323468.1| predicted protein [Populus trichocarpa]
 gi|222868098|gb|EEF05229.1| predicted protein [Populus trichocarpa]
          Length = 700

 Score =  262 bits (670), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 159/419 (37%), Positives = 222/419 (52%), Gaps = 67/419 (15%)

Query: 5   NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLP--PQ 62
           +KCL+S+LWHACAG +V +P V ++V YFPQGH+E      +         + NLP    
Sbjct: 16  DKCLDSQLWHACAGGMVQMPAVNSKVFYFPQGHAEHACEPVD---------FRNLPGASH 66

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEE--QKDTFVPI----ELGIPSKQPTNYFC 116
            +C++  +   AD ETDEV+A++ L P++  E    D  V +    E    +K+P + F 
Sbjct: 67  TLCRVSAIKFMADPETDEVFAKIRLVPINSNEIDLDDQEVAVNGEKEAAHDNKKPVS-FA 125

Query: 117 KTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPK 176
           KTLT SD +  GGFSVPR  AE +FP LD++  PP Q L+A+D+H   WKFRHI+RG P+
Sbjct: 126 KTLTQSDANNGGGFSVPRYCAEMIFPRLDYTADPPVQTLLAKDVHGETWKFRHIYRGTPR 185

Query: 177 RHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSV--------- 227
           RHLLTTGWS FV+ K+LVAGDSV+F+  E   L +G+RRA R  +  P S+         
Sbjct: 186 RHLLTTGWSPFVNHKKLVAGDSVVFLRAENGDLCVGVRRAKRAISGGPESLWNPALGNLV 245

Query: 228 --------LSSDSMHIGL--------------------------LAAAAHAAATNSCFTV 253
                    S +  H  +                          +  AA  AA    F  
Sbjct: 246 VPYGGFGAFSREDEHKMVKNGRGNGNGSKSNESLMGRGKVRAESVIQAAVLAANGLPFET 305

Query: 254 FFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDP 312
            + PRA+  EF +  +  VK V   R   GMRF+M FETE+SS +  +MGT+  + D DP
Sbjct: 306 VYYPRANTPEFFVKAS-LVKTVMQIRWCSGMRFKMAFETEDSSRISWFMGTVCSVQDADP 364

Query: 313 VRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE---PLTTFPMYPSLFPL-RLKRPWHP 367
           + W  S WR ++V WDE    +   RVS W +E    ++   + P   P  +L+ P HP
Sbjct: 365 LCWPGSPWRLLQVTWDEPDLLQNVKRVSPWLVELASHMSAIHLSPFSSPRKKLRLPQHP 423


>gi|222619023|gb|EEE55155.1| hypothetical protein OsJ_02959 [Oryza sativa Japonica Group]
          Length = 658

 Score =  261 bits (668), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 135/279 (48%), Positives = 181/279 (64%), Gaps = 14/279 (5%)

Query: 78  TDEVYAQMTLQPLSPEEQK-----------DTFVPIELGIPSKQPTNYFCKTLTASDTST 126
           TDEVYAQ++L   + E ++           D      +  P++ P + FCKTLTASDTST
Sbjct: 40  TDEVYAQVSLVADNEEVERRMREGEDGAACDGEGEDAVKRPARIP-HMFCKTLTASDTST 98

Query: 127 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 186
           HGGFSVPRRAAE  FP LD+SLQ P QEL+A+DLH  EW+FRHI+RGQP+RHLLTTGWS 
Sbjct: 99  HGGFSVPRRAAEDCFPPLDYSLQRPFQELVAKDLHGTEWRFRHIYRGQPRRHLLTTGWSG 158

Query: 187 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 246
           F++ K+LV+GD+VLF+  E  +L LG+RRA +     P   L +   +   L+  AHA A
Sbjct: 159 FINKKKLVSGDAVLFLRGEDGELRLGVRRAAQLKNASPFPALHNQISNTSSLSEVAHAVA 218

Query: 247 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 306
             S F +++NPR S SEF+IP  K++++ F    SVGMRF++ +E+E++S RR  G I G
Sbjct: 219 VKSIFHIYYNPRLSQSEFIIPYWKFMRS-FSQPFSVGMRFKLRYESEDASERRRTGIIIG 277

Query: 307 ISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 345
             + DP+ W  S W+ + V WD+     R   VS WEIE
Sbjct: 278 SREADPM-WHGSKWKCLVVKWDDDVECRRPNGVSPWEIE 315


>gi|225030804|gb|ACN79515.1| auxin response factor 3a [Lotus japonicus]
          Length = 679

 Score =  261 bits (667), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 160/376 (42%), Positives = 210/376 (55%), Gaps = 87/376 (23%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
           CL  ELWHACAGP++ LP  G+ VVYFPQGH E V        D  +   PN+PP + C+
Sbjct: 42  CL--ELWHACAGPMICLPKKGSVVVYFPQGHLELVQ-------DLQLL-LPNIPPHVFCR 91

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKD-----------TFVPIELGIPSKQPTNYF 115
           + +V +HA+  +DEVY Q+ L P S + Q+                 E  + S  P + F
Sbjct: 92  VVDVKLHAEEGSDEVYCQVLLVPESEQVQQKLQEGEVDADGEEEEDTETMMKSSTP-HMF 150

Query: 116 CKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRG-- 173
           CKTLTASDTSTHGGFSVPRRAAE  FP LD+S Q P+QEL+A+DLH  EWKFRHI+RG  
Sbjct: 151 CKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGREWKFRHIYRGVS 210

Query: 174 ------QPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSV 227
                 QP+RHLLTTGWS FV               N+K                    +
Sbjct: 211 LMSHVWQPRRHLLTTGWSGFV---------------NKKK-------------------L 236

Query: 228 LSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFR 287
           +S D++                   +F   RAS SEF++P+ K++K++ ++  S GMRFR
Sbjct: 237 VSGDAV-------------------LFL--RASSSEFIVPIHKFLKSLDYS-YSAGMRFR 274

Query: 288 MLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 347
           M FET++++ RR  G I GI+D+DPVRW  S W+ + V WD+  A  R  RVS WEIEP 
Sbjct: 275 MRFETDDAAERRCAGLIVGITDVDPVRWPGSKWKCLLVRWDDLEA-TRNNRVSPWEIEPS 333

Query: 348 TTFPMYPSLFPLRLKR 363
            +  +  +L    LKR
Sbjct: 334 GSASIPNNLMAASLKR 349


>gi|6165644|gb|AAF04627.1|AF099735_1 auxin response factor 10 [Arabidopsis thaliana]
          Length = 701

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 152/393 (38%), Positives = 212/393 (53%), Gaps = 56/393 (14%)

Query: 6   KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 65
           K L+ +LWHACAG +V +P++ + V YF QGH+E   A      D H P    +PP ++C
Sbjct: 5   KSLDPQLWHACAGSMVQIPSLNSTVFYFAQGHTEHAHAPP----DFHAPR---VPPLILC 57

Query: 66  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGI--PS-------KQPTNYFC 116
           ++ +V   AD ETDEV+A++TL PL P    D      LG+  PS       K+    F 
Sbjct: 58  RVVSVKFLADAETDEVFAKITLLPL-PGNDLDLENDAVLGLTPPSSDGNGNGKEKPASFA 116

Query: 117 KTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPK 176
           KTLT SD +  GGFSVPR  AE +FP LD+S +PP Q + A+D+H   WKFRHI+RG P+
Sbjct: 117 KTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVNAKDIHGETWKFRHIYRGTPR 176

Query: 177 RHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR------------------ 218
           RHLLTTGWS FV+ K+L+AGDS++F+ +E   L +GIRRA R                  
Sbjct: 177 RHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKRGGLGSNAGSDNPYPGFSG 236

Query: 219 -----PPTVMPSSVL--------SSDSMHIGLLAAAAHAAATNSC------FTVFFNPRA 259
                  T   S ++          ++   G +   A A +  +C      F V + PRA
Sbjct: 237 FLRDDESTTTTSKLMMMKRNGNNDGNAAATGRVRVEAVAGSGGACSXVDKAFEVVYYPRA 296

Query: 260 SPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNS 318
           S  EF +     V++        GMR +M FETE+SS +  +MGT + +   DP+RW NS
Sbjct: 297 STPEFCVKAAD-VRSAMRXXWCXGMRXKMAFETEDSSRISWFMGTXSAVQVADPIRWPNS 355

Query: 319 HWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 351
            WR ++V WDE    +   RVS W +  ++  P
Sbjct: 356 PWRLLQVAWDEPDLXQNVKRVSPWLVXLVSNMP 388


>gi|42571255|ref|NP_973701.1| auxin response factor 11 [Arabidopsis thaliana]
 gi|330255621|gb|AEC10715.1| auxin response factor 11 [Arabidopsis thaliana]
          Length = 514

 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 128/249 (51%), Positives = 172/249 (69%), Gaps = 4/249 (1%)

Query: 107 PSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWK 166
           P+K   + F K LTASDTSTHGGFSV R+ A +  PSLD +   P QEL+ARDLH  EW+
Sbjct: 29  PAKPTVDSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWR 88

Query: 167 FRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSS 226
           F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+  E   L +G+RR  +  + MP+S
Sbjct: 89  FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMPAS 148

Query: 227 VLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRF 286
           V+SS SM +G+LA A+HA  T + F VF+ PR   S+F+I + KY+ A+     S+GMR+
Sbjct: 149 VISSQSMRLGVLATASHAVTTTTIFVVFYKPRI--SQFIISVNKYMMAM-KNGFSLGMRY 205

Query: 287 RMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEP 346
           RM FE EES  R + GTI G  DL   +W  S WRS+++ WDE ++ +R  +VS WEIEP
Sbjct: 206 RMRFEGEESPERIFTGTIIGSGDLSS-QWPASKWRSLQIQWDEPSSIQRPNKVSPWEIEP 264

Query: 347 LTTFPMYPS 355
            +   + P+
Sbjct: 265 FSPSALTPT 273



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 44/121 (36%), Positives = 68/121 (56%), Gaps = 5/121 (4%)

Query: 648 DSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELR 706
           DS   +S   C   +S   ++  +  Q T TR+ +KV   G+ VGR++D++   SY+EL 
Sbjct: 374 DSNISDSTTKCQDPNSS--NSPKEQKQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDELI 431

Query: 707 EELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQK 766
           +EL +MF IEG+     +  W +VF D E D +L+GDDPW  F      + I   ++V+K
Sbjct: 432 KELEKMFEIEGELSP--KDKWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVKK 489

Query: 767 M 767
           M
Sbjct: 490 M 490


>gi|147834267|emb|CAN63853.1| hypothetical protein VITISV_024151 [Vitis vinifera]
          Length = 680

 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 152/409 (37%), Positives = 213/409 (52%), Gaps = 70/409 (17%)

Query: 5   NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLI 64
           +KCL+ +LWHACAG +V +P++ +RVVYFPQGH+E      +          P +PP ++
Sbjct: 5   DKCLDPQLWHACAGGMVHMPSLNSRVVYFPQGHAEHAYGNVDF-------GNPRIPPLVL 57

Query: 65  CQLHNVTMHADVETDEVYAQMTLQPL--SPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           C++  V   AD E+DEVYA++ L PL  +  E +D  +    GI + +    F KTLT S
Sbjct: 58  CRVSAVKYLADPESDEVYAKIRLIPLRNTEGETEDDVLMGGNGIEAPEKPASFAKTLTQS 117

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           D +  GGFSVPR  AE +FP LD+S  PP Q ++A+D+H   W+FRHI+RG P+RHLLTT
Sbjct: 118 DANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWRFRHIYRGTPRRHLLTT 177

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRP-------------------PTVM 223
           GWS FV+ K LVAGDS++F+  E   L +GIRRA R                    P   
Sbjct: 178 GWSNFVNKKNLVAGDSIVFLRAENGDLCVGIRRAKRAGCGPESPSGWNPASGNGTSPYRG 237

Query: 224 PSSVLSSDSMHIGL-----------------LAAAAHAAATNSCFTVFFNPRASPSEFVI 266
            S  L  D     L                 +A AA  AA    F + + PRAS  EF +
Sbjct: 238 YSGFLREDENRPILTHSNAGFRGKGRVRAESVAEAATLAANGQPFVIVYYPRASTPEFCV 297

Query: 267 PLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWR---- 321
             +  V+A    +   GM+F+M FET++SS +  +MG I+ +   DP+RW NS WR    
Sbjct: 298 KASS-VRAAMQIQWCPGMKFKMAFETDDSSRISWFMGNISSVHVNDPIRWPNSPWRLLQV 356

Query: 322 -------------------SVKVGWDESTAGERQPRVSLWEIEPLTTFP 351
                               ++V WDE    +   RV+ W +E ++  P
Sbjct: 357 LEYEIQKIVSSHLNTLCKLILQVTWDEPDLLQNVKRVNPWLVELVSHVP 405


>gi|400269961|gb|AFP74915.1| auxin response factor 10 [Brassica napus]
          Length = 703

 Score =  259 bits (662), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 150/395 (37%), Positives = 210/395 (53%), Gaps = 58/395 (14%)

Query: 6   KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 65
           + L+ +LW ACAG +V +P++ + V YFPQGH+E   A      D H P    +PP ++C
Sbjct: 5   RSLDPQLWQACAGSMVQIPSLNSTVFYFPQGHAEHAHAPP----DFHAPR---VPPLILC 57

Query: 66  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTN------YFCKTL 119
           ++ +V   AD ETDEVY+++TL PL P    D      LG+      N       F KTL
Sbjct: 58  RVASVKFLADAETDEVYSKITLLPL-PGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTL 116

Query: 120 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 179
           T SD +  GGFSVPR  AE +FP LD++ +PP Q +IA+D+H    KFRHI+RG P+RHL
Sbjct: 117 TQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETRKFRHIYRGTPRRHL 176

Query: 180 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR-----------------PPTV 222
           LTTGWS FV+ K+L+AGDS++F+ +E  +L +GIRRA R                  P  
Sbjct: 177 LTTGWSTFVNQKKLIAGDSIVFLRSETGELCVGIRRAKRGGLGSNGLGSDNNNNSNNPYP 236

Query: 223 MPSSVLSSDSMHIG-LLAAAAHAAATNS------------------------CFTVFFNP 257
             S  L  D +    L+    +    N                          F V + P
Sbjct: 237 GFSGFLRDDEITTSKLMMMKRNGGNVNDANAPGGRVRVEAVAEAVARAACGQAFEVVYYP 296

Query: 258 RASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEES-SVRRYMGTITGISDLDPVRWS 316
           RAS  EF +  +  V++    R   GMRF+M FETE+S  +  +MGT++ +   DP+RW 
Sbjct: 297 RASTPEFCVKASD-VRSAMRIRWCSGMRFKMAFETEDSLRISWFMGTVSAVQVADPIRWP 355

Query: 317 NSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 351
           NS WR ++V WDE    +   RVS W +E ++  P
Sbjct: 356 NSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMP 390



 Score = 47.0 bits (110), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 59/111 (53%), Gaps = 16/111 (14%)

Query: 682 VKVY-KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 740
            KV+ +S  VGR+LD+S   SY EL  +L +MFGIE +  D L     +V+ D       
Sbjct: 593 CKVFMESEDVGRTLDLSVIGSYQELYRKLAEMFGIEER-SDLLT---HVVYRDANGVTKR 648

Query: 741 LGDDPWEAFVSNVWYIKI---LSPEDVQKM-------GEQGVESFSPSSGQ 781
           +GD+P+  F+     + I   +S ++V+K        GE G++S S  +GQ
Sbjct: 649 IGDEPFSDFMRATKRLTIKMDISGDNVRKTWITGIRNGENGIDS-STKTGQ 698


>gi|226528158|ref|NP_001140452.1| hypothetical protein [Zea mays]
 gi|194699576|gb|ACF83872.1| unknown [Zea mays]
 gi|413934017|gb|AFW68568.1| hypothetical protein ZEAMMB73_208127 [Zea mays]
          Length = 373

 Score =  258 bits (660), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 149/357 (41%), Positives = 198/357 (55%), Gaps = 37/357 (10%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ +CL+ +LWHACAG +V +P V +RV YFPQGH+E  A       D        LPP 
Sbjct: 5   GEERCLDPQLWHACAGGMVQMPPVRSRVYYFPQGHAEH-AHGGGGATDLAGARARPLPPL 63

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP---SKQPTNYFCKTL 119
           ++C +  V   AD ETDEV+A++ L P +P E  +   P E GI    +++  + F KTL
Sbjct: 64  VLCTVAGVRFLADPETDEVFAKIRLVPAAPGEV-EFGEPREFGIDPEDAREKLSSFAKTL 122

Query: 120 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 179
           T SD +  GGFSVPR  AE +FP LD+   PP Q ++A+D+H   WKFRHIFRG P+RHL
Sbjct: 123 TQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIFRGTPRRHL 182

Query: 180 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR-------------PPTVMPSS 226
           LTTGWS FV+ K+LVAGDS++F+  E  +L +GIRRA R              P     S
Sbjct: 183 LTTGWSAFVNQKKLVAGDSIVFLRTEHGELCVGIRRAKRVSCGGMECISGWNAPVYGALS 242

Query: 227 VLSSD-----------------SMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLT 269
               D                  + I  +  AA  AA+   F V + PRAS  EFV+   
Sbjct: 243 AFLKDEEGKITKGPGGYMRGRGKVEITDVVEAASLAASGQPFEVVYYPRASTPEFVVKAA 302

Query: 270 KYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKV 325
             V+     +   GMRF+M FETE+SS +  +MGTI      D +RW NS WR ++V
Sbjct: 303 S-VQNAMRNQWCPGMRFKMAFETEDSSRISWFMGTIASAQVADTIRWPNSPWRLLQV 358


>gi|224069455|ref|XP_002326354.1| predicted protein [Populus trichocarpa]
 gi|222833547|gb|EEE72024.1| predicted protein [Populus trichocarpa]
          Length = 705

 Score =  258 bits (659), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 148/392 (37%), Positives = 208/392 (53%), Gaps = 61/392 (15%)

Query: 5   NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLP--PQ 62
           +KCL+S+LWHACAG +V +P V ++V YFPQGH+E      +         + NLP    
Sbjct: 16  DKCLDSQLWHACAGGMVQMPAVNSKVFYFPQGHAEHACEPVD---------FRNLPRVSH 66

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQK--DTFVPIELGIPSKQPTNY---FCK 117
            +C++ ++   AD ETDEV+A++ L P++  E    D  V +  G+ + Q  N    F K
Sbjct: 67  NLCRVSDIKFMADPETDEVFAKIRLVPINSNELDLDDQEVAVNGGMEAAQDNNKPVSFAK 126

Query: 118 TLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKR 177
           TLT SD +  GGFSVPR  AE +FP LD++  PP Q L+A+D+H   WKFRHI+RG P+R
Sbjct: 127 TLTQSDANNGGGFSVPRYCAEMIFPRLDYTADPPVQTLLAKDVHGETWKFRHIYRGTPRR 186

Query: 178 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRP--------------PTVM 223
           HLLTTGWS FV+ K+L+AGDSV+F   E   L +G+RRA R                + +
Sbjct: 187 HLLTTGWSPFVNHKKLIAGDSVVFFRAENGDLCVGVRRAKRTSGGGPESLWNPAGGSSAV 246

Query: 224 PS-----------------------------SVLSSDSMHIGLLAAAAHAAATNSCFTVF 254
           PS                             S++    +    +  A   AA    F V 
Sbjct: 247 PSGGFGAFLREDEHKLMRSASGNGNGSKSNESLMGQGKVRAESVIQAVTLAANGLPFEVV 306

Query: 255 FNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPV 313
           + PRA+  EF +  +  VK     R   GMRF+M FETE+SS +  +MGT+  +   D +
Sbjct: 307 YYPRANTPEFCVKAS-LVKTAMQIRWCSGMRFKMAFETEDSSRISWFMGTVCSVQAADSL 365

Query: 314 RWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 345
            W +S WR ++V WDE    +   RVS W +E
Sbjct: 366 WWPHSPWRLLQVTWDEPDLLQNVKRVSPWLVE 397


>gi|224104635|ref|XP_002313508.1| predicted protein [Populus trichocarpa]
 gi|222849916|gb|EEE87463.1| predicted protein [Populus trichocarpa]
          Length = 690

 Score =  258 bits (659), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 189/548 (34%), Positives = 262/548 (47%), Gaps = 101/548 (18%)

Query: 4   DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQL 63
           + K L+ +LW ACAG +V +P + + V YFPQGH+E   +  N         +P   P L
Sbjct: 5   EKKSLDPQLWQACAGSMVHIPPLNSTVFYFPQGHAEHSQSPVN---------FPQRIPSL 55

Query: 64  I-CQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIEL--------GIPSKQPTNY 114
           I C++  V   AD +TDEVYA++   PL P    D      L          P K  +  
Sbjct: 56  ILCRVATVKFLADPDTDEVYAKIGFVPL-PNTDLDFAHDRGLCGNGNDGDSCPDKPAS-- 112

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F KTLT SD +  GGFSVPR  AE +FP LD+S  PP Q +IA+D+H   WKFRHI+RG 
Sbjct: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSSDPPLQTVIAKDVHGEVWKFRHIYRGT 172

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTV--MPSSVLSS-- 230
           P+RHLLTTGWS FV+ K+LVAGDS++F+  E   L +GIRR+ R   +   P S L++  
Sbjct: 173 PRRHLLTTGWSTFVNQKKLVAGDSIVFLRAENGDLRVGIRRSKRGIGIGSRPESSLTTGW 232

Query: 231 --------------------DSMHIGLLAA-----------AAHAAATNSCFTVFFNPRA 259
                               D M  G +             AA  AA    F V + PR+
Sbjct: 233 NSNNATCAIPYDGFSLFVKEDEMRNGGMKGRGRVKPEEVLEAAGLAANGKPFQVVYYPRS 292

Query: 260 SPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNS 318
           S  EF +  +  V+A        GMRF+M FETE+SS +  +MGT+T +   DPVRW NS
Sbjct: 293 STPEFCVKASS-VRAAMRIGWCSGMRFKMAFETEDSSRISWFMGTVTSVQVADPVRWPNS 351

Query: 319 HWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPM--------------YPSL--FPLRLK 362
            WR ++V WDE    +   RVS W +E ++  P+              +P    FPL L+
Sbjct: 352 PWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPPRKKSRFPQQLGFPLDLQ 411

Query: 363 --------RPWHPST--SSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQR 412
                    P  PS+     +DN      G    + G     +   N Q  GMF    QR
Sbjct: 412 FQLPSFSGNPLGPSSPMCCLSDNTPAGIQGARHAQFGISLSDIQFNNKQQSGMFLSSLQR 471

Query: 413 VEP------SFLG--NDHNQQYQAMLAAG-----MQSGDPVRQ-QFMQLQQPF---QYLQ 455
             P      ++L    + N+    +L  G     ++  D V++ QF+   QP    Q++ 
Sbjct: 472 FNPHSRNSETYLTGHTNSNENISCLLTMGNSNPNLEKSDNVKKHQFLLFGQPILIEQHIS 531

Query: 456 QSGSQNPL 463
            S S + +
Sbjct: 532 HSCSTDAV 539



 Score = 47.8 bits (112), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 9/95 (9%)

Query: 666 LHNVGQIDQLT-PTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLR 724
           LHN  +I + T P + F++   S  VG +LD+S   SY EL  +L  MFGIE      + 
Sbjct: 586 LHNTSEIGKDTGPCKVFLE---SEDVGWTLDLSALCSYEELHGKLANMFGIE---RSEMS 639

Query: 725 SGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKIL 759
           S   +++ D    V  +GD+P+  F+     + IL
Sbjct: 640 S--HVLYRDATGSVKQIGDEPFSVFMKTAKRLTIL 672


>gi|357150288|ref|XP_003575407.1| PREDICTED: auxin response factor 8-like [Brachypodium distachyon]
          Length = 694

 Score =  257 bits (657), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 155/401 (38%), Positives = 216/401 (53%), Gaps = 36/401 (8%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G  +C++ +LW ACAG + ++P VG+ V YFPQGH+E   A         +     +P  
Sbjct: 14  GAERCVDRQLWLACAGGMCTVPPVGSSVYYFPQGHAEH--ALGLAAAGPGVGGLSRVPAL 71

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           L C++  V   AD +TDEV+A + L PL  + Q D           ++P + F KTLT S
Sbjct: 72  LPCRVAAVRYMADPDTDEVFAGIRLVPLRQDVQDDGAAAAGEDEEHEKPAS-FAKTLTQS 130

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           D +  GGFSVPR  AE +FP LD+S  PP Q ++A+D+H   WKFRHI+RG P+RHLLTT
Sbjct: 131 DANNGGGFSVPRYCAETIFPRLDYSADPPVQTVVAKDVHGASWKFRHIYRGTPRRHLLTT 190

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRP---------PTVMPSSVLSSDSM 233
           GWS FV+ K+LVAGDS++F+  +   L +GIRRA R          P      + +   M
Sbjct: 191 GWSAFVNHKKLVAGDSIVFLRGDAGDLHVGIRRAKRGFCGAEEGSLPGWENQQLYTMGPM 250

Query: 234 HIGL------------------LAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAV 275
             G                   +A AA  A +   F V + PRAS  EF +     V+A 
Sbjct: 251 RGGGNVSPSCKGGRRGKVRAEDVAEAARLAGSGQPFEVVYYPRASTPEFCV-RAAAVRAA 309

Query: 276 FHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGE 334
              +   GMRF+M FETE+SS +  +MGT+ G+   DP+RW  S WR ++V WDE    +
Sbjct: 310 MRVQWCPGMRFKMAFETEDSSRISWFMGTVAGVQVADPIRWPQSPWRLLQVTWDEPDLLQ 369

Query: 335 RQPRVSLWEIEPLTTFP---MYPSLFPLRLKRPWHPSTSSF 372
              RVS W +E +++ P   +  S  P R K+P  P+   F
Sbjct: 370 NVKRVSPWLVELVSSMPAIHLASSFSPPR-KKPRIPAYPEF 409


>gi|295844304|gb|ADG43149.1| auxin response factor 15 [Zea mays]
          Length = 711

 Score =  257 bits (657), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 153/401 (38%), Positives = 214/401 (53%), Gaps = 36/401 (8%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G  +C++ +LW ACAG + ++P VG  V YFPQGH+E          D      P L P 
Sbjct: 14  GAERCVDRQLWLACAGGMCTVPPVGASVYYFPQGHAEHALGLAGA-ADLSAARVPALVP- 71

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIE---LGIPSKQPTNYFCKTL 119
             C++  V   AD +TDEV+A++ L PL   +       +E        ++    F KTL
Sbjct: 72  --CRVTAVRYMADPDTDEVFARIRLVPLRGGDADADAGGVEDDAAAADEQEKPASFAKTL 129

Query: 120 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 179
           T SD +  GGFSVPR  AE +FP LD++  PP Q ++A+D+H   WKFRHI+RG P+RHL
Sbjct: 130 TQSDANNGGGFSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGAAWKFRHIYRGTPRRHL 189

Query: 180 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMP-----SSVLSSDSMH 234
           LTTGWS FV+ K+LVAGDS++F+  +   L +GIRRA R            S  +    +
Sbjct: 190 LTTGWSTFVNQKKLVAGDSIVFLRGDSGDLHVGIRRAKRGFCGAGGGGGDDSPAAGWDHY 249

Query: 235 IGLL------AAAAHA---------------AATNSCFTVFFNPRASPSEFVIPLTKYVK 273
            GL+       AAA A               AA    F V + PRAS  EF +     V+
Sbjct: 250 AGLMRGNVSPCAAAKARGKVRPEDVAEAARLAAAGQSFEVVYYPRASTPEFCV-RAAAVR 308

Query: 274 AVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTA 332
                + S GMRF+M FETE+SS +  +MGT+ G+   DP+RW  S WR ++V WDE   
Sbjct: 309 VAMRVQWSPGMRFKMAFETEDSSRISWFMGTVAGVQVTDPIRWPQSPWRLLQVTWDEPDL 368

Query: 333 GERQPRVSLWEIEPLTTFP-MYPSLFPLRLKRPWHPSTSSF 372
            +   RVS W +E +++ P ++ + F    K+P  P+   F
Sbjct: 369 LQNVKRVSPWLVELVSSMPAIHLASFSPPRKKPRIPAYPEF 409


>gi|242039347|ref|XP_002467068.1| hypothetical protein SORBIDRAFT_01g019130 [Sorghum bicolor]
 gi|241920922|gb|EER94066.1| hypothetical protein SORBIDRAFT_01g019130 [Sorghum bicolor]
          Length = 689

 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 160/409 (39%), Positives = 224/409 (54%), Gaps = 50/409 (12%)

Query: 4   DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQL 63
           + +CL+ +LWHACAG +V +P V +RV YFPQGH+E   A    ++ +       LPP +
Sbjct: 7   EERCLDPQLWHACAGGMVQMPPVRSRVYYFPQGHAEHAHAGGAADLAA---GARPLPPLV 63

Query: 64  ICQLHNVTMHADVETDEVYAQMTLQPLSPEE----QKDTFVPIELGIP-----SKQPTNY 114
           +C +  V   AD ETDEV+A++ L PL+P E    + D F     G+      +++  + 
Sbjct: 64  LCAVTGVRFLADPETDEVFAKIRLVPLAPGEVEFREPDEFGLGVGGVGVDPADAREKLSS 123

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F KTLT SD +  GGFSVPR  AE +FP LD+   PP Q ++A+D+H   WKFRHI+RG 
Sbjct: 124 FAKTLTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIYRGT 183

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR--------------PP 220
           P+RHLLTTGWS FV+ K+LVAGDS++F+  E  +L +GIRRA R              P 
Sbjct: 184 PRRHLLTTGWSTFVNQKKLVAGDSIVFLRTEHGELCVGIRRAKRVSCGGMECMSGWNAPG 243

Query: 221 TVMPSSVLSSD----------------SMHIGLLAAAAHAAATNSCFTVFFNPRASPSEF 264
               S+ L  +                 + I  +  AA  AA+   F V + PRAS  EF
Sbjct: 244 YGALSAFLKDEEGKMIKGPGGYMRGRGKVKITDVVEAASLAASGQPFEVVYYPRASTPEF 303

Query: 265 VIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSV 323
           V+     V+     +   GMRF+M FETE+SS +  +MGTI      DP+RW NS WR +
Sbjct: 304 VVKAAS-VQNAMRNQWCPGMRFKMAFETEDSSRISWFMGTIASAQVADPIRWPNSPWRLL 362

Query: 324 KVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL-----RLKRPWHP 367
           +V WDE    +    V+ W +E +++ P    L P      +L+ P HP
Sbjct: 363 QVTWDEPDLLQNVKCVNPWLVEIVSSIPPI-HLGPFSPPRKKLRMPQHP 410


>gi|134103847|gb|ABO60876.1| auxin response factor 3 [Gossypium hirsutum]
          Length = 647

 Score =  256 bits (655), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 153/390 (39%), Positives = 210/390 (53%), Gaps = 49/390 (12%)

Query: 6   KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 65
           K L+ +LWHACAG +V +P V ++V YFPQGH+E      +        + P +P  L+C
Sbjct: 7   KSLDPQLWHACAGSMVQIPPVNSKVFYFPQGHAEHSLYPVD------FSSSPPIPALLLC 60

Query: 66  QLHNVTMHADVETDEVYAQMTLQPL---SPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           ++ +V   AD ETDEVYA++ L PL    P+ + D       G  + +    F KTLT S
Sbjct: 61  RVASVKFLADAETDEVYAKIMLVPLPNTEPDLENDAV--FGGGSDNVEKPASFAKTLTQS 118

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           D +  GGFSVPR  AE +FP LD++  PP Q +IARD+H   WKFRHI+RG P+RHLLTT
Sbjct: 119 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVIARDVHGEIWKFRHIYRGTPRRHLLTT 178

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR----------------PPTVMPSS 226
           GWS FV+ K+LVAGDS++F+  E  +L +GIRRA R                 P    S 
Sbjct: 179 GWSSFVNHKKLVAGDSIVFLRAENGELCVGIRRAKRGNDTGAESGLGNGNDVSPYGGFSG 238

Query: 227 VLSSDSMHI--------------GLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYV 272
            L  D   I                +  A   AA    F + + PRAS  EF +  +  V
Sbjct: 239 FLKEDESKITRKRSPRGKGKVRAEAVVEAVALAANGQPFEIVYYPRASTPEFCVKASA-V 297

Query: 273 KAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDEST 331
           +A         MRF+M FETE+ S +  +MGT++ +   DP+RW NS WR ++V WDE  
Sbjct: 298 RAAMRVPWCSLMRFKMAFETEDCSRISWFMGTVSSVHIADPLRWPNSPWRLLQVTWDEPD 357

Query: 332 AGERQPRVSLWEIEPLTTFPMYPSLFPLRL 361
             +   RVS W +E      + P++ P+ L
Sbjct: 358 LLQNVERVSPWLVE------LVPNMLPVHL 381


>gi|297738134|emb|CBI27335.3| unnamed protein product [Vitis vinifera]
          Length = 163

 Score =  256 bits (655), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 128/163 (78%), Positives = 140/163 (85%), Gaps = 7/163 (4%)

Query: 644 MPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYN 703
           MPLG SGF  S++GC+QD SELL N GQ+D  TP+RTFVKVYKSGSVGRSLDI+RFSSY+
Sbjct: 1   MPLGASGFQGSLFGCVQDPSELLQNAGQVDPPTPSRTFVKVYKSGSVGRSLDITRFSSYH 60

Query: 704 ELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPED 763
           ELREELGQMFGIEGK E+PLRSGWQLVFVDRENDVLLLGDDPWEAFV+NVWYIKILSPED
Sbjct: 61  ELREELGQMFGIEGKLENPLRSGWQLVFVDRENDVLLLGDDPWEAFVNNVWYIKILSPED 120

Query: 764 VQKMGEQGVES-FSPSSGQRANSRGNCGRDPV------GSLEY 799
           VQKMG+QG+ES FSP+S QR NS G   RD V      GSLEY
Sbjct: 121 VQKMGKQGIESGFSPNSAQRMNSSGTDDRDLVSGLPSAGSLEY 163


>gi|413923141|gb|AFW63073.1| hypothetical protein ZEAMMB73_321944 [Zea mays]
          Length = 689

 Score =  256 bits (655), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 153/401 (38%), Positives = 214/401 (53%), Gaps = 36/401 (8%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G  +C++ +LW ACAG + ++P VG  V YFPQGH+E          D      P L P 
Sbjct: 14  GAERCVDRQLWLACAGGMCTVPPVGASVYYFPQGHAEHALGLAGA-ADLSAARVPALVP- 71

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIE---LGIPSKQPTNYFCKTL 119
             C++  V   AD +TDEV+A++ L PL   +       +E        ++    F KTL
Sbjct: 72  --CRVTAVRYMADPDTDEVFARIRLVPLRGGDADADAGGVEDDAAAADEQEKPASFAKTL 129

Query: 120 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 179
           T SD +  GGFSVPR  AE +FP LD++  PP Q ++A+D+H   WKFRHI+RG P+RHL
Sbjct: 130 TQSDANNGGGFSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGAAWKFRHIYRGTPRRHL 189

Query: 180 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMP-----SSVLSSDSMH 234
           LTTGWS FV+ K+LVAGDS++F+  +   L +GIRRA R            S  +    +
Sbjct: 190 LTTGWSTFVNQKKLVAGDSIVFLRGDSGDLHVGIRRAKRGFCGAGGGGGDDSPAAGWDHY 249

Query: 235 IGLL------AAAAHA---------------AATNSCFTVFFNPRASPSEFVIPLTKYVK 273
            GL+       AAA A               AA    F V + PRAS  EF +     V+
Sbjct: 250 AGLMRGNVSPCAAAKARGKVRPEDVAEAARLAAAGQSFEVVYYPRASTPEFCV-RAAAVR 308

Query: 274 AVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTA 332
                + S GMRF+M FETE+SS +  +MGT+ G+   DP+RW  S WR ++V WDE   
Sbjct: 309 VAMRVQWSPGMRFKMAFETEDSSRISWFMGTVAGVQVTDPIRWPQSPWRLLQVTWDEPDL 368

Query: 333 GERQPRVSLWEIEPLTTFP-MYPSLFPLRLKRPWHPSTSSF 372
            +   RVS W +E +++ P ++ + F    K+P  P+   F
Sbjct: 369 LQNVKRVSPWLVELVSSMPAIHLASFSPPRKKPRIPAYPEF 409


>gi|21741865|emb|CAD41455.1| OSJNBa0019D11.3 [Oryza sativa Japonica Group]
 gi|38344647|emb|CAE05633.2| OSJNBb0061C13.15 [Oryza sativa Japonica Group]
 gi|116310816|emb|CAH67605.1| OSIGBa0145G11.4 [Oryza sativa Indica Group]
          Length = 695

 Score =  256 bits (654), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 149/386 (38%), Positives = 212/386 (54%), Gaps = 56/386 (14%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           ++S+LW ACAG + S+P VG  V YFPQGH+EQ +A  +        +   +PP + C++
Sbjct: 15  VDSQLWAACAGSMSSVPPVGAAVYYFPQGHAEQASAAVDL-------SSARVPPLVPCRV 67

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSK------------QPTNYF 115
             V   AD E+DEV+A++ L PL P +       +++G  +             +PT+ F
Sbjct: 68  VAVRFMADAESDEVFAKIRLVPLRPGDAV-----VDVGEAAAAEARREEENSRPRPTS-F 121

Query: 116 CKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQP 175
            KTLT SD +  GGFSVPR  AE +FP LD+S +PP Q + A+D+H VEW FRHI+RG P
Sbjct: 122 AKTLTQSDANNGGGFSVPRFCAETIFPELDYSSEPPVQSVCAKDVHGVEWTFRHIYRGTP 181

Query: 176 KRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSM-- 233
           +RHLLTTGWS FV+ K+L AGDS++F+ +E   + +G+RRA R    +     S  S+  
Sbjct: 182 RRHLLTTGWSPFVNKKQLTAGDSIVFMRDEGGNIHVGLRRAKRGFCSIGGDDESLSSIPG 241

Query: 234 ---HIGLLA------------------------AAAHAAATNSCFTVFFNPRASPSEFVI 266
              + GL+                          AA  A T   F V + PRAS  EF +
Sbjct: 242 WDQYRGLMRRNATATATGGRTPPKGKVPPENVLTAATRATTGQPFEVLYYPRASTPEFCV 301

Query: 267 PLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKV 325
                V+     +   GMRF+M FETE+SS +  +MGT+ G+   DPVRW  S WR ++V
Sbjct: 302 -RAAAVRTAMAVQWCPGMRFKMAFETEDSSRISWFMGTVAGVQASDPVRWPQSPWRLLQV 360

Query: 326 GWDESTAGERQPRVSLWEIEPLTTFP 351
            WDE    +   RV  W +E +++ P
Sbjct: 361 TWDEPELLQNVKRVCPWLVELVSSMP 386



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 52/96 (54%), Gaps = 6/96 (6%)

Query: 674 QLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVD 733
           +L P +  V V +S +VGRSLD+S  SS+ EL   L  MF I     D LRS   LV+  
Sbjct: 606 ELNPGQCKVFV-ESETVGRSLDLSALSSFEELYACLSDMFSIG---SDELRS--HLVYRS 659

Query: 734 RENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGE 769
              +V   GD+P+ AFV +   ++IL+      +G+
Sbjct: 660 PAGEVKHAGDEPFCAFVKSARKLRILTDAGSDNLGD 695


>gi|158563894|sp|Q01I35.2|ARFJ_ORYSI RecName: Full=Auxin response factor 10
 gi|158563995|sp|Q7XKK6.3|ARFJ_ORYSJ RecName: Full=Auxin response factor 10
 gi|218195228|gb|EEC77655.1| hypothetical protein OsI_16669 [Oryza sativa Indica Group]
          Length = 699

 Score =  256 bits (653), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 149/386 (38%), Positives = 212/386 (54%), Gaps = 56/386 (14%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           ++S+LW ACAG + S+P VG  V YFPQGH+EQ +A  +        +   +PP + C++
Sbjct: 19  VDSQLWAACAGSMSSVPPVGAAVYYFPQGHAEQASAAVDL-------SSARVPPLVPCRV 71

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSK------------QPTNYF 115
             V   AD E+DEV+A++ L PL P +       +++G  +             +PT+ F
Sbjct: 72  VAVRFMADAESDEVFAKIRLVPLRPGDAV-----VDVGEAAAAEARREEENSRPRPTS-F 125

Query: 116 CKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQP 175
            KTLT SD +  GGFSVPR  AE +FP LD+S +PP Q + A+D+H VEW FRHI+RG P
Sbjct: 126 AKTLTQSDANNGGGFSVPRFCAETIFPELDYSSEPPVQSVCAKDVHGVEWTFRHIYRGTP 185

Query: 176 KRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSM-- 233
           +RHLLTTGWS FV+ K+L AGDS++F+ +E   + +G+RRA R    +     S  S+  
Sbjct: 186 RRHLLTTGWSPFVNKKQLTAGDSIVFMRDEGGNIHVGLRRAKRGFCSIGGDDESLSSIPG 245

Query: 234 ---HIGLL------------------------AAAAHAAATNSCFTVFFNPRASPSEFVI 266
              + GL+                          AA  A T   F V + PRAS  EF +
Sbjct: 246 WDQYRGLMRRNATATATGGRTPPKGKVPPENVLTAATRATTGQPFEVLYYPRASTPEFCV 305

Query: 267 PLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKV 325
                V+     +   GMRF+M FETE+SS +  +MGT+ G+   DPVRW  S WR ++V
Sbjct: 306 -RAAAVRTAMAVQWCPGMRFKMAFETEDSSRISWFMGTVAGVQASDPVRWPQSPWRLLQV 364

Query: 326 GWDESTAGERQPRVSLWEIEPLTTFP 351
            WDE    +   RV  W +E +++ P
Sbjct: 365 TWDEPELLQNVKRVCPWLVELVSSMP 390



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 52/96 (54%), Gaps = 6/96 (6%)

Query: 674 QLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVD 733
           +L P +  V V +S +VGRSLD+S  SS+ EL   L  MF I     D LRS   LV+  
Sbjct: 610 ELNPGQCKVFV-ESETVGRSLDLSALSSFEELYACLSDMFSIG---SDELRS--HLVYRS 663

Query: 734 RENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGE 769
              +V   GD+P+ AFV +   ++IL+      +G+
Sbjct: 664 PAGEVKHAGDEPFCAFVKSARKLRILTDAGSDNLGD 699


>gi|413943302|gb|AFW75951.1| hypothetical protein ZEAMMB73_807339 [Zea mays]
          Length = 690

 Score =  254 bits (648), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 153/392 (39%), Positives = 212/392 (54%), Gaps = 57/392 (14%)

Query: 5   NKCL-NSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQL 63
            +CL + +LWHACAG +V +P V +RV YFPQGH+E      + ++ +       +P  +
Sbjct: 17  GRCLVDPQLWHACAGGMVQMPPVHSRVYYFPQGHAEHAQGHAHADLPAG-----RVPALV 71

Query: 64  ICQLHNVTMHADVETDEVYAQMTLQPLSPEE--QKDTFVPIELGIPSKQPTNYFCKTLTA 121
           +C++  V   AD +TDEV A++ L P+ P E    D   P   G    +P + F KTLT 
Sbjct: 72  LCRVDAVRFLADPDTDEVLARVRLAPVRPNEPDHADAAAP---GAREDKPAS-FAKTLTQ 127

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SD +  GGFSVPR  AE +FP LD+S  PP Q ++A+D+H V WKFRHI+RG P+RHLLT
Sbjct: 128 SDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLLT 187

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR-------------PPTVMP---- 224
           TGWS FV+ KRLVAGDS++F+      L +GIRRA +             PP        
Sbjct: 188 TGWSAFVNQKRLVAGDSIVFMRTGNGDLCVGIRRAKKGGIGGGPEFPHHQPPDGGGYGYG 247

Query: 225 ----SSVL---SSDSMHIGL---------LAAAAHAAATNSCFTVFFNPRASPSEFVIPL 268
               S+ L     D+   G          +  AA+ AA+   F V + PRAS  EF +  
Sbjct: 248 YAGFSTFLRGEEDDAAARGKVRVLVRPEEVVEAANLAASGQPFEVVYYPRASTPEFCV-K 306

Query: 269 TKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVGW 327
              V+A   T+   GMRF+M FETE+SS +  +MGT+  +   DP+RW NS WR +    
Sbjct: 307 AGAVRAAMRTQWCAGMRFKMAFETEDSSRISWFMGTVAAVQVADPIRWPNSPWRLL---- 362

Query: 328 DESTAGERQPRVSLWEIEPLTTFPMYPSLFPL 359
                 +   RVS W +E +++ P    L P 
Sbjct: 363 ------QNVKRVSPWLVELVSSTPAIHHLTPF 388


>gi|36939192|gb|AAQ86960.1| ETTIN-like auxin response factor [Triticum aestivum]
          Length = 537

 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 120/231 (51%), Positives = 167/231 (72%), Gaps = 2/231 (0%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           FCKTLTASDTSTHGGFSVPRRAAE  FP LD+    P+QEL+A+DLH  +W+FRHI+RGQ
Sbjct: 11  FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYQQIRPSQELVAKDLHGAKWRFRHIYRGQ 70

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMH 234
           P+RHLLTTGWS FV+ K+LV+GD+VLF+  +  +L LG+RRAI+          +S+S  
Sbjct: 71  PRRHLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQLKNEALLKAFNSNSSK 130

Query: 235 IGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEE 294
           I  L+A A++    S F + +NPRA+ SEF+IP  K++K++ +    +GMRF++ + +E+
Sbjct: 131 IHTLSAVANSLKHRSVFHICYNPRAAASEFIIPYWKFLKSL-NRPFCIGMRFKIQYGSED 189

Query: 295 SSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 345
            + RR  G ITGI+D+DP+RW+ S W+S+ V W++ T    Q R+S WEIE
Sbjct: 190 VNERR-SGMITGINDVDPIRWTGSKWKSLLVRWEDGTDCNSQNRLSPWEIE 239


>gi|218191212|gb|EEC73639.1| hypothetical protein OsI_08153 [Oryza sativa Indica Group]
          Length = 681

 Score =  253 bits (645), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 149/397 (37%), Positives = 212/397 (53%), Gaps = 33/397 (8%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G  +C++ +LW ACAG + ++P VG  V YFPQGH+E        E+ +       +P  
Sbjct: 13  GAERCVDRQLWLACAGGMCTVPPVGAAVYYFPQGHAEHALGLAAPELSAA-----RVPAL 67

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           + C++ +V   AD +TDEV+A++ L PL   E  D            +    F KTLT S
Sbjct: 68  VPCRVASVRYMADPDTDEVFARIRLVPLRAAEDGDVEEDGAAAGEEHEKPASFAKTLTQS 127

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           D +  GGFSVPR  AE +FP LD++  PP Q ++A+D+H V W FRHI+RG P+RHLLTT
Sbjct: 128 DANNGGGFSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGVAWNFRHIYRGTPRRHLLTT 187

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR----PPTVMPSSVLSSDSMHIGLL 238
           GWS FV+ K+LVAGDS++F+  +   L +GIRRA R           + L     + GL+
Sbjct: 188 GWSTFVNQKKLVAGDSIVFLRGDGGDLHVGIRRAKRGFCGGGGGAEEASLPGWDQYGGLM 247

Query: 239 AA---------------------AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFH 277
                                  AA  A+    F V + PRAS  EF +     V+A   
Sbjct: 248 RGNASPCAAAKGRGKVRAEDVVEAARLASGGQPFEVVYYPRASTPEFCV-RAAAVRAAMR 306

Query: 278 TRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQ 336
            +   GMRF+M FETE+SS +  +MGT+  +   DP+RW  S WR ++V WDE    +  
Sbjct: 307 VQWCPGMRFKMAFETEDSSRISWFMGTVASVQVADPIRWPQSPWRLLQVTWDEPDLLQNV 366

Query: 337 PRVSLWEIEPLTTFP-MYPSLFPLRLKRPWHPSTSSF 372
            RVS W +E +++ P ++ S F    K+P  P+   F
Sbjct: 367 KRVSPWLVELVSSMPAIHLSSFSPPRKKPRIPAYPEF 403


>gi|350540040|ref|NP_001234880.1| auxin response factor 16 [Solanum lycopersicum]
 gi|300253178|gb|ADJ96591.1| auxin response factor 16 [Solanum lycopersicum]
          Length = 671

 Score =  251 bits (642), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 142/384 (36%), Positives = 208/384 (54%), Gaps = 48/384 (12%)

Query: 2   IGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 61
           + + KC++S  WH C G +V +P V ++V YFPQG++E      +  V + IP       
Sbjct: 3   VVEEKCVDSLFWHVCTGSMVQIPPVNSKVFYFPQGYAEHTFTNVDFTVLARIP------A 56

Query: 62  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTA 121
            ++C++  V   AD ETDEVYA++ L P+  E+ +D  V  E   P+     +F KTLT 
Sbjct: 57  MILCRVDAVKFLADTETDEVYAKIRLIPV--EDFEDDSVVEETEKPA-----FFAKTLTQ 109

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SD +  GGFSVPR  AE +FP LDF+  PP Q + A+D+H V W FRHI+RG P+RHLLT
Sbjct: 110 SDANNGGGFSVPRYCAETIFPKLDFTADPPVQVVKAKDVHGVTWNFRHIYRGTPRRHLLT 169

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPS--SVLSSDSMHIGLLA 239
           +GWS FV+ K+LVAG SV+F+  E ++L +GIRR  R     P   S   S +   G   
Sbjct: 170 SGWSAFVNKKKLVAGGSVVFVKAENDELCVGIRRVKRGGIGGPETQSGWKSTACSYGGFV 229

Query: 240 AAAHAAATN------------------------SC-------FTVFFNPRASPSEFVIPL 268
                ++TN                        SC       F + + P AS  E+ +  
Sbjct: 230 TEDENSSTNGNLISYGERFRDKGKVSPDEVVRVSCLAANGQPFEIVYYPGASTPEYCVKA 289

Query: 269 TKYVKAVFHTRVSVGMRFRMLFETEE-SSVRRYMGTITGISDLDPVRWSNSHWRSVKVGW 327
           +  V+A    +   GMRF+M FETE+ S +  +MG+I+ +  +DP+RW +S WR ++V W
Sbjct: 290 SS-VRAAMSVQWCSGMRFKMAFETEDFSQISWFMGSISSVQVVDPIRWPHSLWRLLQVTW 348

Query: 328 DESTAGERQPRVSLWEIEPLTTFP 351
           DE    +    V+ W +E ++  P
Sbjct: 349 DEPDLLQNVKSVNPWLVELVSNMP 372


>gi|295844290|gb|ADG43142.1| auxin response factor 8 [Zea mays]
          Length = 707

 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 154/399 (38%), Positives = 216/399 (54%), Gaps = 34/399 (8%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G  +C++ +LW ACAG + ++P VG  V YFPQGH+E  A   +   D      P L P 
Sbjct: 14  GAERCVDRQLWLACAGSMCTVPLVGASVCYFPQGHAEH-ALGLDGAADLSAARVPALVP- 71

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPT-NYFCKTLTA 121
             C++  V   AD +TDEV+A++ L PL   E     +  ++    +Q     F KTLT 
Sbjct: 72  --CRVTAVRYMADPDTDEVFARIRLVPLRGGEAHAGGLDDDVAAADEQEKPASFAKTLTQ 129

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SD +  GGFSVPR  AE +FP LD++  PP Q ++A+D+H   WKFRHI+RG P+RHLLT
Sbjct: 130 SDANNGGGFSVPRYCAETIFPRLDYAADPPVQNVVAKDVHGTAWKFRHIYRGTPRRHLLT 189

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSM-----HIG 236
           TGWS FV+ K+L+AGDS++F+  +   L +GIRRA R                    + G
Sbjct: 190 TGWSTFVNQKKLIAGDSIVFLRGDSGDLHVGIRRAKRGFCGAGGGGGDEAPTPGWHHYAG 249

Query: 237 LL------AAAAHA---------------AATNSCFTVFFNPRASPSEFVIPLTKYVKAV 275
           L+       AAA A               AA    F V + PRAS  EF +     V+A 
Sbjct: 250 LIRGNVSPCAAAKARGKVRPEDVAEAARLAAAGQSFEVVYYPRASTPEFCV-RAAAVRAA 308

Query: 276 FHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGE 334
              + S GMRF+M FETE+SS +  +MGT+ G+   DP+RW  S WR ++V WDE    +
Sbjct: 309 MRVQWSPGMRFKMAFETEDSSRISWFMGTVAGVQVTDPIRWPQSPWRLLQVTWDEPDLLQ 368

Query: 335 RQPRVSLWEIEPLTTFP-MYPSLFPLRLKRPWHPSTSSF 372
              RVS W +E +++ P ++ + F    K+P  P+   F
Sbjct: 369 NVKRVSPWLVELVSSMPAIHLASFSPPRKKPRIPAYPEF 407



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 6/88 (6%)

Query: 682 VKVY-KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 740
            KV+ +S +VGR+LD+S   S++EL   L +MFG+EG     +RS  ++++     +V  
Sbjct: 624 CKVFVESDTVGRNLDLSALGSFDELYGRLSEMFGVEGA---EMRS--RVLYRGATGEVRH 678

Query: 741 LGDDPWEAFVSNVWYIKILSPEDVQKMG 768
            GD+P+  FV +   I IL+      +G
Sbjct: 679 AGDEPFSDFVKSARRITILTDAGSDNLG 706


>gi|283806528|tpg|DAA06632.1| TPA_exp: auxin response factor [Physcomitrella patens]
          Length = 714

 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 153/405 (37%), Positives = 210/405 (51%), Gaps = 71/405 (17%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYP-NLPPQ--LI 64
           L+++LWHACAG +V LP VG +VVYFPQGH EQ A+T         P +P  L P   + 
Sbjct: 36  LDAQLWHACAGGMVQLPHVGAKVVYFPQGHGEQAAST---------PEFPRTLVPNGSVP 86

Query: 65  CQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDT 124
           C++ +V   AD ETDEV+A++ LQP      +D      L  P  +    F KTLT SD 
Sbjct: 87  CRVVSVNFLADTETDEVFARICLQPEIGSSAQD-LTDDSLASPPLEKPASFAKTLTQSDA 145

Query: 125 STHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 184
           +  GGFS+PR  AE +FP LD+ + PP Q ++A+D+H   WKFRHI+RG P+RHLLTTGW
Sbjct: 146 NNGGGFSIPRYCAETIFPPLDYCIDPPVQTVLAKDVHGEVWKFRHIYRGTPRRHLLTTGW 205

Query: 185 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR----------------PPTVMPS--S 226
           S FV+ K+LVAGD+++F+     +L +G+RR++R                  T+ PS   
Sbjct: 206 STFVNQKKLVAGDAIVFLRIASGELCVGVRRSMRGVSNGESSSWHSSISNASTIRPSRWE 265

Query: 227 VLSSDSMHIGLLAAAAHAAATNSCF----------TVFFNPRA----------------- 259
           V  ++S    L     +  A NS            + F   RA                 
Sbjct: 266 VKGTESFSDFLGGVGDNGYALNSSIRSENQGSPTTSSFARDRARVTAKSVLEAAALAVSG 325

Query: 260 -----------SPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGI 307
                      S +EF +     VK         GMRF+M FETE+SS +  +MGTI  +
Sbjct: 326 ERFEVVYYPRASTAEFCVK-AGLVKRALEQSWYAGMRFKMAFETEDSSRISWFMGTIAAV 384

Query: 308 SDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPM 352
              DPV W +S WR ++V WDE    +   RVS W++E + T PM
Sbjct: 385 QAADPVLWPSSPWRVLQVTWDEPDLLQGVNRVSPWQLELVATLPM 429


>gi|255559342|ref|XP_002520691.1| transcription factor, putative [Ricinus communis]
 gi|223540076|gb|EEF41653.1| transcription factor, putative [Ricinus communis]
          Length = 634

 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 147/369 (39%), Positives = 200/369 (54%), Gaps = 60/369 (16%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           L  ELW ACAGPLV +P  G +VVY+PQGH EQV A  N++    +P Y NLP ++ C++
Sbjct: 44  LYKELWRACAGPLVYVPRAGEKVVYYPQGHMEQVEAYMNQDGKMEMPVY-NLPSKIFCKV 102

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELG----IPSKQPTNYFCKTLTASD 123
            NV + A+  TDEV+AQ+TL P   E ++D     E G    +P K     F K LT+SD
Sbjct: 103 INVQLKAEAGTDEVFAQITLLP---ETKQDVLSLKEDGNSLPLPRKADLRSFSKKLTSSD 159

Query: 124 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 183
           TSTHGGFSV +R AE+  P +D S +PP Q L+A+D+H                      
Sbjct: 160 TSTHGGFSVLKRHAEECLPPMDMSGEPPEQMLVAKDMH---------------------- 197

Query: 184 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAH 243
                                E  +L +G+RRA++  +   +SV+S+ SM  G+L+ A H
Sbjct: 198 --------------------GENGELRIGLRRAMKLHSNASTSVISAHSMQHGILSMAFH 237

Query: 244 AAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGT 303
           A  T S FTV++ P  +P+EF+IP  +YV++      SVG  F MLFE EE + +R  GT
Sbjct: 238 AITTGSIFTVYYRPWTNPTEFIIPFDQYVESA-ELEYSVGTTFGMLFEVEECAEQRSEGT 296

Query: 304 ITGISDLDPVRWSNSHWRSVKVGWDESTAGERQP-RVSLWEIEPLTTFPMYPSLFPLRLK 362
           I G  D+D +RW NS WRS+K  WD ++ G   P RVS W I P+     Y S       
Sbjct: 297 IVGNEDVDHIRWPNSEWRSLKAKWDATSEGFVHPDRVSPWMIVPIEPIKKYDS------- 349

Query: 363 RPWHPSTSS 371
            P HPS  +
Sbjct: 350 -PLHPSKKA 357



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/221 (24%), Positives = 91/221 (41%), Gaps = 49/221 (22%)

Query: 542 GSLPEGSGNLLNFS---GAGPSMLRQQFPQQSLGSKYEPSQVRDFVHSMSLPSSYNGKDA 598
           G++    GN+   S   G  P ++    P+ ++GS+                        
Sbjct: 416 GTILFSGGNITRLSLPNGCSPPLISNGIPENAIGSR---------------------NLT 454

Query: 599 AVGTENCNTDSQN------------------SVVFGVHIDSSGLLLPTTVSSFTTSVDPG 640
            +  ++CN+ SQ+                   ++FGV +  S   LP+  ++  +  +  
Sbjct: 455 VLNVKSCNSGSQDWRTLELKDAHAPPNGGGRYMLFGVDLVKSLPELPSPQAATYSDHESL 514

Query: 641 VSSMPLGDSGFHN-SMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRF 699
            S +P+  S     S      +S     N      L+ T    KV K GS GRS+DI++F
Sbjct: 515 YSVLPISQSSVAEPSKCTSATNSGSQCKNCCSFTNLSCT----KVLKHGSAGRSVDITKF 570

Query: 700 SSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 740
             Y++L  EL QMF  +G   D   SGW++ + D E D++L
Sbjct: 571 DGYDKLIRELDQMFDFKGTLIDG-SSGWEVTY-DDEGDIML 609


>gi|75261153|sp|Q6K223.1|ARFH_ORYSJ RecName: Full=Auxin response factor 8
 gi|48717038|dbj|BAD23727.1| putative auxin response factor 10 [Oryza sativa Japonica Group]
 gi|215769265|dbj|BAH01494.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222623278|gb|EEE57410.1| hypothetical protein OsJ_07601 [Oryza sativa Japonica Group]
          Length = 681

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 144/375 (38%), Positives = 201/375 (53%), Gaps = 32/375 (8%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G  +C++ +LW ACAG + ++P VG  V YFPQGH+E        E+ +       +P  
Sbjct: 13  GAERCVDRQLWLACAGGMCTVPPVGAAVYYFPQGHAEHALGLAAPELSAA-----RVPAL 67

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           + C++ +V   AD +TDEV+A++ L PL   E  D            +    F KTLT S
Sbjct: 68  VPCRVASVRYMADPDTDEVFARIRLVPLRAAEDGDVEEDGAAAGEEHEKPASFAKTLTQS 127

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           D +  GGFSVPR  AE +FP LD++  PP Q ++A+D+H V W FRHI+RG P+RHLLTT
Sbjct: 128 DANNGGGFSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGVAWNFRHIYRGTPRRHLLTT 187

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR----PPTVMPSSVLSSDSMHIGL- 237
           GWS FV+ K+LVAGDS++F+  +   L +GIRRA R           + L     + GL 
Sbjct: 188 GWSTFVNQKKLVAGDSIVFLRGDGGDLHVGIRRAKRGFCGGGGGAEEASLPGWDQYGGLM 247

Query: 238 --------------------LAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFH 277
                               L  AA  A     F V + PRAS  EF +     V+A   
Sbjct: 248 RGNASPCAAAKGRGKVRAEDLVEAARLANGGQPFEVVYYPRASTPEFCV-RAAAVRAAMR 306

Query: 278 TRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQ 336
            +   GMRF+M FETE+SS +  +MGT+  +   DP+RW  S WR ++V WDE    +  
Sbjct: 307 VQWCPGMRFKMAFETEDSSRISWFMGTVASVQVADPIRWPQSPWRLLQVTWDEPDLLQNV 366

Query: 337 PRVSLWEIEPLTTFP 351
            RVS W +E +++ P
Sbjct: 367 KRVSPWLVELVSSMP 381


>gi|297610668|ref|NP_001064872.2| Os10g0479900 [Oryza sativa Japonica Group]
 gi|255679498|dbj|BAF26786.2| Os10g0479900 [Oryza sativa Japonica Group]
          Length = 379

 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 141/367 (38%), Positives = 201/367 (54%), Gaps = 44/367 (11%)

Query: 2   IGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 61
           + + +CL+ +LWHACAG +V +P   +RV YF QGH+E           +       LPP
Sbjct: 7   VEEVRCLDPQLWHACAGGMVQMPAPRSRVYYFAQGHAEHADGGGGAAAAAAELGPRALPP 66

Query: 62  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEE----QKDTFVPI----ELGIPSKQPTN 113
            ++C++  V   AD ++DEVYA++ L P++P E    + D   P+    +   PS +   
Sbjct: 67  LVLCRVEGVQFLADRDSDEVYAKIRLAPVAPGEAEFREPDELCPLGAAGDAAEPSPEKPT 126

Query: 114 YFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRG 173
            F KTLT SD +  GGFSVPR  AE +FP LD+   PP Q ++A+D+H V WKFRHI+RG
Sbjct: 127 SFAKTLTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGVVWKFRHIYRG 186

Query: 174 QPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPT----VMP----- 224
            P+RHLLTTGWS FV+ K+LVAGDS++F+     +L +GIRRA R        M      
Sbjct: 187 TPRRHLLTTGWSTFVNQKKLVAGDSIVFLRTRHGELCVGIRRAKRMACGGMECMSGWNAP 246

Query: 225 -------SSVLSSDS------------------MHIGLLAAAAHAAATNSCFTVFFNPRA 259
                  S+ L  +                   + +  +  AA  A++   F V + PRA
Sbjct: 247 GYGGGGFSAFLKEEESKLMKGHGGGGYMKGKGKVRMADVVEAASLASSGQPFEVAYYPRA 306

Query: 260 SPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNS 318
           S  +FV+     V+A    +   GMRF+M FETE+SS +  +MGTI+ +   DP RW NS
Sbjct: 307 STPDFVVKAAS-VQAAMRIQWCSGMRFKMAFETEDSSRISWFMGTISSVQVADPNRWPNS 365

Query: 319 HWRSVKV 325
            WR ++V
Sbjct: 366 PWRLLQV 372


>gi|115464877|ref|NP_001056038.1| Os05g0515400 [Oryza sativa Japonica Group]
 gi|113579589|dbj|BAF17952.1| Os05g0515400 [Oryza sativa Japonica Group]
          Length = 587

 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 120/233 (51%), Positives = 164/233 (70%), Gaps = 2/233 (0%)

Query: 113 NYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFR 172
           + FCKTLTASDTSTHGGFSVPRRAAE  FP LD+    P+QELIA DLH  +WKFRHI+R
Sbjct: 31  HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKTVRPSQELIAVDLHGTQWKFRHIYR 90

Query: 173 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDS 232
           GQP+RHLLT GWS FV+ K+LV+GD+VLF+  +  QL LG+RRA++         ++S  
Sbjct: 91  GQPRRHLLTIGWSSFVNRKKLVSGDAVLFLRGDDGQLRLGVRRAVQLRNEALFEPVNSSD 150

Query: 233 MHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFET 292
             + +L++ A +    S F + FNPR+  SEF++P  + +K++ H   S+GMRFR+ +E+
Sbjct: 151 SKLRILSSVASSLENKSVFHICFNPRSGASEFIVPYWRLLKSLNHP-FSIGMRFRVCYES 209

Query: 293 EESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 345
           E+++  R  G I+GIS++DP+RW  S W+ + V WD+ST    Q RVS WEIE
Sbjct: 210 EDAN-ERSAGLISGISEVDPIRWPGSRWKCLLVRWDDSTDSSHQNRVSPWEIE 261


>gi|414871039|tpg|DAA49596.1| TPA: hypothetical protein ZEAMMB73_456369 [Zea mays]
          Length = 370

 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 143/361 (39%), Positives = 200/361 (55%), Gaps = 40/361 (11%)

Query: 2   IGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 61
           + + +CL+ +LWHACAG +V +P V +RV YFPQGH+E        ++         LP 
Sbjct: 4   VAEERCLDPQLWHACAGGMVQMPPVRSRVYYFPQGHAEHAHGGGAADLAGAR----ALPS 59

Query: 62  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP---SKQPTNYFCKT 118
            ++C +  V   AD ETDEV+A++ L P++P E  +   P E  +    +++  + F KT
Sbjct: 60  LVLCSVTGVRFLADPETDEVFAKIRLVPVAPGEV-EFREPDEFSVDPADAREKLSSFAKT 118

Query: 119 LTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRH 178
           LT SD +  GGFSVPR  AE +FP LD+   PP Q ++A+D+H   WKFRHI+RG P+RH
Sbjct: 119 LTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIYRGTPRRH 178

Query: 179 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR--------------PPTVMP 224
           LLTTGWS FV+ K+LVAGDS++F+  E  +L +GIRR  R              P     
Sbjct: 179 LLTTGWSTFVNQKKLVAGDSIVFLRTEHGELCVGIRRVKRVSCGGMECMSGWNAPGYGAL 238

Query: 225 SSVLSSD----------------SMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPL 268
           S+ L  +                 + I  +  AA  AA+   F V + PRAS  EFV+  
Sbjct: 239 SAFLKDEEGKMMKSHGGYMRGRGKVKITDVVNAASLAASGQPFEVVYYPRASTPEFVVKA 298

Query: 269 TKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVGW 327
              V+     +   GMRF+M FETE+SS +  +MGTI      DP+RW NS WR ++V  
Sbjct: 299 AS-VQNAMRNQWCPGMRFKMAFETEDSSRISWFMGTIASAQVADPIRWPNSPWRLLQVLL 357

Query: 328 D 328
           D
Sbjct: 358 D 358


>gi|222632222|gb|EEE64354.1| hypothetical protein OsJ_19194 [Oryza sativa Japonica Group]
          Length = 588

 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 120/233 (51%), Positives = 164/233 (70%), Gaps = 2/233 (0%)

Query: 113 NYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFR 172
           + FCKTLTASDTSTHGGFSVPRRAAE  FP LD+    P+QELIA DLH  +WKFRHI+R
Sbjct: 32  HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKTVRPSQELIAVDLHGTQWKFRHIYR 91

Query: 173 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDS 232
           GQP+RHLLT GWS FV+ K+LV+GD+VLF+  +  QL LG+RRA++         ++S  
Sbjct: 92  GQPRRHLLTIGWSSFVNRKKLVSGDAVLFLRGDDGQLRLGVRRAVQLRNEALFEPVNSSD 151

Query: 233 MHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFET 292
             + +L++ A +    S F + FNPR+  SEF++P  + +K++ H   S+GMRFR+ +E+
Sbjct: 152 SKLRILSSVASSLENKSVFHICFNPRSGASEFIVPYWRLLKSLNHP-FSIGMRFRVCYES 210

Query: 293 EESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 345
           E+++  R  G I+GIS++DP+RW  S W+ + V WD+ST    Q RVS WEIE
Sbjct: 211 EDAN-ERSAGLISGISEVDPIRWPGSRWKCLLVRWDDSTDSSHQNRVSPWEIE 262


>gi|379323242|gb|AFD01320.1| auxin response factor 25 [Brassica rapa subsp. pekinensis]
          Length = 549

 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 133/348 (38%), Positives = 205/348 (58%), Gaps = 21/348 (6%)

Query: 2   IGD-NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLP 60
           IG+ N  LN +LW  CAGPL   P +G           E++ A+ + E+    P + ++P
Sbjct: 16  IGETNNYLNDKLWKLCAGPLFDTPKIG-----------EKLVASMDDELCQLKPIF-DIP 63

Query: 61  PQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLT 120
            ++ C + ++ +  +  T+E+YA+++L P    +  D  +PI     + Q  NYF K L+
Sbjct: 64  SKICCNVFSINLKVEPSTNEIYAEVSLLP----DTSDVEIPIPKNENNIQNINYFTKVLS 119

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
           ASDTST+GGF + +R A +  P LD S   P+QE+IA+D+H  EW F+H  RG PKRHL 
Sbjct: 120 ASDTSTNGGFVLYKRHAIECLPLLDMSQLTPSQEIIAKDIHGHEWSFKHTSRGTPKRHLF 179

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 240
           T+GW+ F   K+LVAGDS +F+  E  +  +GI +A      +P+S++S +SMH  ++A 
Sbjct: 180 TSGWNEFAKGKKLVAGDSFVFLRGENGESRVGISKAAHQQRNIPTSLISKESMHHSVVAT 239

Query: 241 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 300
           A +A      F VF+ PR+  S+F++   K+V  V + + S+G +F M FE ++ +  RY
Sbjct: 240 ALNAIENKCMFVVFYKPRS--SQFIVNFDKFVDRV-NNKFSIGSKFSMKFEGKDLNEIRY 296

Query: 301 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 348
            GT+ G+ D     W +S WRS++V WDE+    R  +VS WEIE LT
Sbjct: 297 NGTVVGVRDFS-THWKDSEWRSLEVQWDEAATIPRPDKVSPWEIELLT 343



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 55/87 (63%), Gaps = 2/87 (2%)

Query: 679 RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 738
           ++  KV+  G + R++D++ F  YN+L +EL ++F I+G+    + + W++ F+  + D+
Sbjct: 438 KSRTKVHMEGVIERTVDLTIFDGYNQLIDELERLFDIKGELH--MHNKWKMFFIYNDGDM 495

Query: 739 LLLGDDPWEAFVSNVWYIKILSPEDVQ 765
           ++LGDDPW  F +    I I S EDV+
Sbjct: 496 MILGDDPWPKFCNMAKEIFICSKEDVK 522


>gi|242062386|ref|XP_002452482.1| hypothetical protein SORBIDRAFT_04g026610 [Sorghum bicolor]
 gi|241932313|gb|EES05458.1| hypothetical protein SORBIDRAFT_04g026610 [Sorghum bicolor]
          Length = 708

 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 153/398 (38%), Positives = 214/398 (53%), Gaps = 34/398 (8%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G  +C++ +LW ACAG + ++P VG  V YFPQGH+E          D      P L P 
Sbjct: 14  GAERCVDRQLWLACAGGMCTVPPVGASVYYFPQGHAEHALGLAGT-ADLSAARVPALVP- 71

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
             C++  V   AD +TDEV+A++ L PL   E     +  +     ++P + F KTLT S
Sbjct: 72  --CRVAAVRYMADPDTDEVFARIRLVPLRGGEADAGGLEDDAADEQEKPAS-FAKTLTQS 128

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           D +  GGFSVPR  AE +FP LD++  PP Q ++A+D+H   WKFRHI+RG P+RHLLTT
Sbjct: 129 DANNGGGFSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGAAWKFRHIYRGTPRRHLLTT 188

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSD-----SMHIGL 237
           GWS FV+ K+LVAGDS++F+  +   L +GIRRA R                    + GL
Sbjct: 189 GWSTFVNQKKLVAGDSIVFLRGDSGDLHVGIRRAKRGFCGAGGGGGEEAPSPGWDHYAGL 248

Query: 238 L------AAAAHA---------------AATNSCFTVFFNPRASPSEFVIPLTKYVKAVF 276
           +       AAA A               AA    F   + PRAS  EF +     V+A  
Sbjct: 249 MRGNVSPCAAAKARGKVRPEDVAEAARLAAAGQSFEAVYYPRASTPEFCV-RAAAVRAAM 307

Query: 277 HTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGER 335
             + S GMRF+M FETE+SS +  +MGT+ G+   DP+RW  S WR ++V WDE    + 
Sbjct: 308 RVQWSPGMRFKMAFETEDSSRISWFMGTVAGVQVTDPIRWPQSPWRLLQVTWDEPDLLQN 367

Query: 336 QPRVSLWEIEPLTTFP-MYPSLFPLRLKRPWHPSTSSF 372
             RVS W +E +++ P ++ + F    K+P  P+   F
Sbjct: 368 VKRVSPWLVELVSSMPAIHLASFSPPRKKPRIPAYPEF 405



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 58/112 (51%), Gaps = 14/112 (12%)

Query: 657 GCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIE 716
           G  Q  SEL    GQ       + FV+   S +VGR+LD+S  SS++EL   L +MFGIE
Sbjct: 610 GSQQQVSELGLEPGQC------KVFVE---SDTVGRNLDLSALSSFDELYRRLSEMFGIE 660

Query: 717 GKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMG 768
           G     LRS  ++++     +V   GD+P+  FV +   + IL+      +G
Sbjct: 661 GA---ELRS--RVLYRCATGEVKHAGDEPFSDFVRSARRLTILTDAGSDNLG 707


>gi|357164725|ref|XP_003580146.1| PREDICTED: auxin response factor 8-like [Brachypodium distachyon]
          Length = 715

 Score =  248 bits (633), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 161/412 (39%), Positives = 221/412 (53%), Gaps = 54/412 (13%)

Query: 5   NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLI 64
           +  ++S+LW ACAG + S+P VG  V YFPQGH+EQ A      VD  +P  P+L P   
Sbjct: 17  DDAVDSQLWLACAGSMCSVPPVGAAVYYFPQGHAEQAAGA--GAVD--MPRVPDLVP--- 69

Query: 65  CQLHNVTMHADVETDEVYAQMTLQPL-------SPEEQKDTFVPIELGIPSKQPTNYFCK 117
           C++  V   AD ++DEV+A++ L PL          E      P++    + +P + F K
Sbjct: 70  CRVSAVRFMADPQSDEVFAKIRLLPLRRGEPVADVGEAAAAREPLQQDADNNKPAS-FAK 128

Query: 118 TLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKR 177
           TLT SD +  GGFSVPR  AE +FP+LD+  +PP Q +  RD+H  E+KFRHI+RG P+R
Sbjct: 129 TLTQSDANNGGGFSVPRFCAETIFPALDYGAEPPVQSIFVRDVHGEEFKFRHIYRGTPRR 188

Query: 178 HLLTTGWSVFVSAKRLVAGDSVLFI-----WNEKNQLLLGIRRAIR----PPTVMPSSVL 228
           HLLTTGWS FV+ K+L+AGDSV+F+          ++ +GIRRA R         PSS  
Sbjct: 189 HLLTTGWSNFVNQKKLLAGDSVVFLRASGEGGGGGEVHVGIRRARRVFCGADVEGPSSAA 248

Query: 229 SSDSMHIGLLAAAAHA-------------------------AATNSCFTVFFNPRASPSE 263
           S    + GL+   A +                         AA    F V + PRAS  E
Sbjct: 249 SGWDHYRGLMRGNASSGNDGGGKGNNNNKVTAEDVAAAARLAAAGQVFEVVYYPRASTPE 308

Query: 264 FVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRS 322
           F +     VKA    R   GMRF+M FETE+SS +  +MGT+ G+   DPV W  S WR 
Sbjct: 309 FCV-RAGAVKAAMQVRWCPGMRFKMAFETEDSSRISWFMGTVAGVCAADPVHWPQSPWRL 367

Query: 323 VKVGWDESTAGERQPRVSLWEIEPLTTFP--MYPSLFPLRLKRPWHPSTSSF 372
           ++V WDE    +   RV  W +E +++ P    PS  P R K+P  P+ + F
Sbjct: 368 LQVSWDEPELLQNVKRVCPWLVELVSSMPNLHLPSFSPPR-KKPRIPTCADF 418



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 6/80 (7%)

Query: 682 VKVY-KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 740
            KV+ +S ++GR+LD+S+ SS+ EL   +  MF IE      LR+   + +     +V  
Sbjct: 638 CKVFVESDAIGRNLDLSQLSSFEELYSRMSDMFDIESA---ELRN--NVHYRSAAGEVKN 692

Query: 741 LGDDPWEAFVSNVWYIKILS 760
           +GD+P+ AFV +   + I +
Sbjct: 693 VGDEPFRAFVKSARRLTIFA 712


>gi|297846686|ref|XP_002891224.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297337066|gb|EFH67483.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 629

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 140/355 (39%), Positives = 197/355 (55%), Gaps = 28/355 (7%)

Query: 11  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 70
           +LW  CAGPL  +P VG +V YFPQGH E + + +     S   +        + ++  +
Sbjct: 28  QLWKLCAGPLYDIPKVGEKVYYFPQGHIE-ILSLSLSLSLSLSLSLSLSLSLSLSRVIAI 86

Query: 71  TMHADVETDEVYAQMTLQPLSPE----EQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 126
            +  +  +DE YA++TL P + +     Q D           +   N F K LTASDTS 
Sbjct: 87  QLKVEKNSDETYAEITLMPYTTQVVIHNQNDNHY--------RPSVNSFTKVLTASDTSA 138

Query: 127 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 186
           HGGFSVPR+ A +  P L+ S   PAQEL+  DL   +W+F+H +RG P RHL+TTGW+ 
Sbjct: 139 HGGFSVPRKHAIECLPPLNMSEPLPAQELLTTDLQGNQWRFKHSYRGTPPRHLITTGWNA 198

Query: 187 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 246
           F ++K+LVAGD ++F+  E  +L +GIRRA       PSS++S DSM  G++A+A HA  
Sbjct: 199 FTTSKKLVAGDVIVFLRGECGELRVGIRRAGHQQGNRPSSLISIDSMGHGVIASAVHAFD 258

Query: 247 TNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITG 306
               F V   P    S+F++   K++ AV + + +VG RF M FE ++ S RRY GTI G
Sbjct: 259 NQCMFIVVCKPSIRSSQFIVSYDKFLDAV-NKKFNVGSRFTMRFEGDDLSERRYSGTIIG 317

Query: 307 ISDLDPVRWSNSHWRS-------------VKVGWDESTAGERQPRVSLWEIEPLT 348
           + D  P  W  S WRS             ++V WDE  +  R  +VS WEIE LT
Sbjct: 318 VKDFSP-HWIESEWRSLEVKFSFTLYNIILRVKWDEFASFPRPDKVSPWEIEHLT 371



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 61/101 (60%), Gaps = 3/101 (2%)

Query: 671 QIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQL 729
           Q  QL+ TR+  KV   G +VGR+LD+S  + Y++L  EL ++F + G+ +   R+ W++
Sbjct: 524 QSKQLSSTRSCTKVQMEGVTVGRALDLSVLNGYDQLILELEKLFDLNGQLQT--RNQWEI 581

Query: 730 VFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQ 770
            F+D E D + +GDDPW  F + V  I I + E V+ +  +
Sbjct: 582 SFIDNEGDKMFVGDDPWPEFCNMVKRIIIYTKEKVKNLKSE 622


>gi|194689820|gb|ACF78994.1| unknown [Zea mays]
          Length = 585

 Score =  245 bits (626), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 115/237 (48%), Positives = 164/237 (69%), Gaps = 2/237 (0%)

Query: 109 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFR 168
           K  ++ FCKTLTASDTSTHGGFSVPRRAAE  FP LD+    P+QELIA+DLH ++W+FR
Sbjct: 29  KHASHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYEQLRPSQELIAKDLHGMKWRFR 88

Query: 169 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVL 228
           HI+RGQP+RHLLTTGWS F++ K+LV+GD+VLF+     +L LG+RRA++         +
Sbjct: 89  HIYRGQPRRHLLTTGWSSFINKKKLVSGDAVLFLRGNDGELRLGVRRAVQLKNEALLEAV 148

Query: 229 SSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM 288
           +     + +L+A A++    S F + FNPR   SEF++P  K++K++ +   SVG RF++
Sbjct: 149 NCTDSKLLMLSAVANSLDNRSIFHICFNPRVGASEFIVPYCKFLKSL-NYHFSVGTRFKV 207

Query: 289 LFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 345
             E E+++ R + G I GIS++DP+ W  S W+S+ + WD +T    Q RVS W+IE
Sbjct: 208 GCENEDANERSF-GLIIGISEVDPIHWPGSKWKSLLIKWDGATKYSHQNRVSPWDIE 263


>gi|242088483|ref|XP_002440074.1| hypothetical protein SORBIDRAFT_09g025500 [Sorghum bicolor]
 gi|241945359|gb|EES18504.1| hypothetical protein SORBIDRAFT_09g025500 [Sorghum bicolor]
          Length = 575

 Score =  244 bits (624), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 120/252 (47%), Positives = 169/252 (67%), Gaps = 4/252 (1%)

Query: 94  EQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQ 153
           E+KD     E G   K  ++ FCKTLTASDTSTHGGFSVPRRAAE  FP LD+    P+Q
Sbjct: 12  EEKDG--EKEDGDGEKLTSHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYEQLRPSQ 69

Query: 154 ELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGI 213
           ELIA+DLH ++W+FRHI+RGQP+RHLLTTGWS F++ K+LV+GD+VLF+     +L LG+
Sbjct: 70  ELIAKDLHGMKWRFRHIYRGQPRRHLLTTGWSSFINKKKLVSGDAVLFLRGSDGELRLGV 129

Query: 214 RRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVK 273
           RRA++         ++     + +L+A A +    S F + FNPR   SEF++P  K++K
Sbjct: 130 RRAVQLKNEALLEAVNCTDSKLLMLSAVASSLDNRSIFHICFNPRIGASEFIVPYCKFLK 189

Query: 274 AVFHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAG 333
            + +   S+G RF++  + E+++ R + G I+GIS++DP+RW  S W+S+ V WD  T  
Sbjct: 190 GLNYP-FSIGTRFKVGCKNEDANERSF-GLISGISEVDPIRWPGSKWKSLLVKWDGDTKY 247

Query: 334 ERQPRVSLWEIE 345
             Q RVS W+IE
Sbjct: 248 SHQNRVSPWDIE 259


>gi|224028337|gb|ACN33244.1| unknown [Zea mays]
          Length = 360

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 141/337 (41%), Positives = 187/337 (55%), Gaps = 37/337 (10%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ +CL+ +LWHACAG +V +P V +RV YFPQGH+E  A       D        LPP 
Sbjct: 5   GEERCLDPQLWHACAGGMVQMPPVRSRVYYFPQGHAEH-AHGGGGATDLAGARARPLPPL 63

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP---SKQPTNYFCKTL 119
           ++C +  V   AD ETDEV+A++ L P +P E  +   P E GI    +++  + F KTL
Sbjct: 64  VLCTVAGVRFLADPETDEVFAKIRLVPAAPGEV-EFGEPREFGIDPEDAREKLSSFAKTL 122

Query: 120 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 179
           T SD +  GGFSVPR  AE +FP LD+   PP Q ++A+D+H   WKFRHIFRG P+RHL
Sbjct: 123 TQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIFRGTPRRHL 182

Query: 180 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR-------------PPTVMPSS 226
           LTTGWS FV+ K+LVAGDS++F+  E  +L +GIRRA R              P     S
Sbjct: 183 LTTGWSAFVNQKKLVAGDSIVFLRTEHGELCVGIRRAKRVSCGGMECISGWNAPVYGALS 242

Query: 227 VLSSD-----------------SMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLT 269
               D                  + I  +  AA  AA+   F V + PRAS  EFV+   
Sbjct: 243 AFLKDEEGKITKGPGGYMRGRGKVEITDVVEAASLAASGQPFEVVYYPRASTPEFVVKAA 302

Query: 270 KYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTIT 305
             V+     +   GMRF+M FETE+SS +  +MGTI 
Sbjct: 303 S-VQNAMRNQWCPGMRFKMAFETEDSSRISWFMGTIA 338


>gi|350537067|ref|NP_001234790.1| auxin response factor 14 [Solanum lycopersicum]
 gi|310697418|gb|ADP06664.1| auxin response factor 14 [Solanum lycopersicum]
          Length = 375

 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 135/368 (36%), Positives = 205/368 (55%), Gaps = 54/368 (14%)

Query: 1   MIGDNK--CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPN 58
           ++ DNK  C +S LW ACAG +V +P V + V+YFPQGH+E          D  IP+Y  
Sbjct: 7   LMADNKSNCFDSRLWQACAGTMVKMPAVDSIVLYFPQGHAEHAGVNVEFRSDVKIPSY-- 64

Query: 59  LPPQLICQLHNVTMHADVETDEVYAQMTLQPL-------SPEEQKDTFVPIELGIPSKQP 111
               + C++ ++   A+ ETDEV+A++ L P+       +PEE+      +++G  + + 
Sbjct: 65  ----IPCRVSSIKYMAERETDEVFAKIRLTPVRLSEFFETPEEEG----MVKIGSDNSRK 116

Query: 112 TNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIF 171
              F KTLT SD +  GGFSVP+  A+ +FP+LD+++ PP Q L A D+H   W+FRHI+
Sbjct: 117 PLSFAKTLTQSDANNGGGFSVPKNCADTIFPTLDYNVNPPVQTLSATDIHGKSWQFRHIY 176

Query: 172 RGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRR------AIRP---PTV 222
           RG P+RHLLTTGWS FV+ K+LVAGDS++F+ NE +++ +GIRR      A+ P   P  
Sbjct: 177 RGTPERHLLTTGWSTFVNQKKLVAGDSIVFLRNENDKISIGIRRIKKKSVAMEPETSPWW 236

Query: 223 MPS-------------------------SVLSSDSMHIGLLAAAAHAAATNSCFTVFFNP 257
            PS                         S+++  ++    +  A   A     F V F P
Sbjct: 237 FPSVGNLTIPRGGFSAFLRDDHNTNSSWSLINRGNVKAESVIEATKLATNGQPFEVIFYP 296

Query: 258 RASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSN 317
           +++  EF +  ++ VKA        GMRF+M FETE+  +  +MGTI+ +   DP +W +
Sbjct: 297 QSTTPEFFVKASR-VKAALQIPWCSGMRFKMPFETEDLVISWFMGTISSVQANDPSQWPD 355

Query: 318 SHWRSVKV 325
           S WR ++V
Sbjct: 356 SPWRMLQV 363


>gi|222629220|gb|EEE61352.1| hypothetical protein OsJ_15485 [Oryza sativa Japonica Group]
          Length = 699

 Score =  241 bits (616), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 144/386 (37%), Positives = 207/386 (53%), Gaps = 56/386 (14%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           ++S+LW ACAG + S+P VG  V YFPQGH+EQ +A  +        +   +PP + C++
Sbjct: 19  VDSQLWAACAGSMSSVPPVGAAVYYFPQGHAEQASAAVDL-------SSARVPPLVPCRV 71

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSK------------QPTNYF 115
             V   AD E+DEV+A++ L PL P +       +++G  +             +PT+ F
Sbjct: 72  VAVRFMADAESDEVFAKIRLVPLRPGDAV-----VDVGEAAAAEARREEENSRPRPTS-F 125

Query: 116 CKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQP 175
            KTLT SD +   G    R  AE +FP LD+S +PP Q + A+D+H VEW FRHI+RG P
Sbjct: 126 AKTLTQSDANNGRGVLRARFCAETIFPELDYSSEPPVQSVCAKDVHGVEWTFRHIYRGTP 185

Query: 176 KRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSM-- 233
           +RHLLTTGWS FV+ K+L AGDS++F+ +E   + +G+RRA R    +     S  S+  
Sbjct: 186 RRHLLTTGWSPFVNKKQLTAGDSIVFMRDEGGNIHVGLRRAKRGFCSIGGDDESLSSIPG 245

Query: 234 ---HIGLL------------------------AAAAHAAATNSCFTVFFNPRASPSEFVI 266
              + GL+                          AA  A T   F V + PRAS  EF +
Sbjct: 246 WDQYRGLMRRNATATATGGRTPPKGKVPPENVLTAATRATTGQPFEVLYYPRASTPEFCV 305

Query: 267 PLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKV 325
                V+     +   GMRF+M FETE+SS +  +MGT+ G+   DPVRW  S WR ++V
Sbjct: 306 -RAAAVRTAMAVQWCPGMRFKMAFETEDSSRISWFMGTVAGVQASDPVRWPQSPWRLLQV 364

Query: 326 GWDESTAGERQPRVSLWEIEPLTTFP 351
            WDE    +   RV  W +E +++ P
Sbjct: 365 TWDEPELLQNVKRVCPWLVELVSSMP 390



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 52/96 (54%), Gaps = 6/96 (6%)

Query: 674 QLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVD 733
           +L P +  V V +S +VGRSLD+S  SS+ EL   L  MF I     D LRS   LV+  
Sbjct: 610 ELNPGQCKVFV-ESETVGRSLDLSALSSFEELYACLSDMFSIG---SDELRS--HLVYRS 663

Query: 734 RENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGE 769
              +V   GD+P+ AFV +   ++IL+      +G+
Sbjct: 664 PAGEVKHAGDEPFCAFVKSARKLRILTDAGSDNLGD 699


>gi|51451357|gb|AAU03112.1| putative ETTIN-like auxin response factor [Oryza sativa Japonica
           Group]
          Length = 599

 Score =  241 bits (616), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 120/245 (48%), Positives = 164/245 (66%), Gaps = 14/245 (5%)

Query: 113 NYFCKTLTASDTSTHGGFSVPRRAAEKVFPSL------------DFSLQPPAQELIARDL 160
           + FCKTLTASDTSTHGGFSVPRRAAE  FP L            D+    P+QELIA DL
Sbjct: 31  HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLVIHLKEKLVTFNDYKTVRPSQELIAVDL 90

Query: 161 HDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPP 220
           H  +WKFRHI+RGQP+RHLLT GWS FV+ K+LV+GD+VLF+  +  QL LG+RRA++  
Sbjct: 91  HGTQWKFRHIYRGQPRRHLLTIGWSSFVNRKKLVSGDAVLFLRGDDGQLRLGVRRAVQLR 150

Query: 221 TVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRV 280
                  ++S    + +L++ A +    S F + FNPR+  SEF++P  + +K++ H   
Sbjct: 151 NEALFEPVNSSDSKLRILSSVASSLENKSVFHICFNPRSGASEFIVPYWRLLKSLNHP-F 209

Query: 281 SVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVS 340
           S+GMRFR+ +E+E+++  R  G I+GIS++DP+RW  S W+ + V WD+ST    Q RVS
Sbjct: 210 SIGMRFRVCYESEDAN-ERSAGLISGISEVDPIRWPGSRWKCLLVRWDDSTDSSHQNRVS 268

Query: 341 LWEIE 345
            WEIE
Sbjct: 269 PWEIE 273


>gi|115459460|ref|NP_001053330.1| Os04g0519700 [Oryza sativa Japonica Group]
 gi|113564901|dbj|BAF15244.1| Os04g0519700 [Oryza sativa Japonica Group]
          Length = 392

 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 141/360 (39%), Positives = 199/360 (55%), Gaps = 56/360 (15%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           ++S+LW ACAG + S+P VG  V YFPQGH+EQ +A  +        +   +PP + C++
Sbjct: 19  VDSQLWAACAGSMSSVPPVGAAVYYFPQGHAEQASAAVDL-------SSARVPPLVPCRV 71

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSK------------QPTNYF 115
             V   AD E+DEV+A++ L PL P +       +++G  +             +PT+ F
Sbjct: 72  VAVRFMADAESDEVFAKIRLVPLRPGDAV-----VDVGEAAAAEARREEENSRPRPTS-F 125

Query: 116 CKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQP 175
            KTLT SD +  GGFSVPR  AE +FP LD+S +PP Q + A+D+H VEW FRHI+RG P
Sbjct: 126 AKTLTQSDANNGGGFSVPRFCAETIFPELDYSSEPPVQSVCAKDVHGVEWTFRHIYRGTP 185

Query: 176 KRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSM-- 233
           +RHLLTTGWS FV+ K+L AGDS++F+ +E   + +G+RRA R    +     S  S+  
Sbjct: 186 RRHLLTTGWSPFVNKKQLTAGDSIVFMRDEGGNIHVGLRRAKRGFCSIGGDDESLSSIPG 245

Query: 234 ---HIGLLA------------------------AAAHAAATNSCFTVFFNPRASPSEFVI 266
              + GL+                          AA  A T   F V + PRAS  EF +
Sbjct: 246 WDQYRGLMRRNATATATGGRTPPKGKVPPENVLTAATRATTGQPFEVLYYPRASTPEFCV 305

Query: 267 PLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKV 325
                V+     +   GMRF+M FETE+SS +  +MGT+ G+   DPVRW  S WR ++V
Sbjct: 306 -RAAAVRTAMAVQWCPGMRFKMAFETEDSSRISWFMGTVAGVQASDPVRWPQSPWRLLQV 364


>gi|8778363|gb|AAF79371.1|AC007887_30 F15O4.37 [Arabidopsis thaliana]
          Length = 767

 Score =  238 bits (608), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 128/314 (40%), Positives = 190/314 (60%), Gaps = 19/314 (6%)

Query: 40  QVAATTNKEVDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQP-----LSPEE 94
            V A+T +E++   P   + P +L C++  + +  +  +DE YA++TL P     + P +
Sbjct: 112 HVEASTREELNELQP-ICDFPSKLQCRVIAIQLKVENNSDETYAEITLMPDTTQVVIPTQ 170

Query: 95  QKDTFVPIELGIPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQE 154
            ++ F P+          N F K LTASDTS HGGFSVP++ A +  P LD S   P QE
Sbjct: 171 NQNQFRPL---------VNSFTKVLTASDTSVHGGFSVPKKHAIECLPPLDMSQPLPTQE 221

Query: 155 LIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIR 214
           ++A DLH  +W+FRHI+RG  +RHLLT GW+ F ++K+LV GD ++F+  E  +L +GIR
Sbjct: 222 ILAIDLHGNQWRFRHIYRGTAQRHLLTIGWNAFTTSKKLVEGDVIVFVRGETGELRVGIR 281

Query: 215 RAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKA 274
           RA      +PSS++S +SM  G++A+A HA      F V + PR+  S+F++   K++  
Sbjct: 282 RAGHQQGNIPSSIVSIESMRHGIIASAKHAFDNQCMFIVVYKPRS--SQFIVSYDKFLDV 339

Query: 275 VFHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGE 334
           V + + +VG RF M FE ++ S RR  GTI G+SD  P  W  S WRS++V WDE  +  
Sbjct: 340 V-NNKFNVGSRFTMRFEGDDFSERRSFGTIIGVSDFSP-HWKCSEWRSLEVQWDEFASFP 397

Query: 335 RQPRVSLWEIEPLT 348
           R  +VS W+IE LT
Sbjct: 398 RPNQVSPWDIEHLT 411



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 59/99 (59%), Gaps = 3/99 (3%)

Query: 671 QIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQL 729
           Q  Q + TRT  KV   G ++GR++D+S  + Y++L  EL ++F ++G+ +   R+ W++
Sbjct: 558 QSKQFSSTRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQ--ARNQWEI 615

Query: 730 VFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMG 768
            F + E D +L+G+DPW  F +   Y+   S +D  K+ 
Sbjct: 616 AFTNNEEDKMLVGEDPWPEFCNMRGYVASNSKDDPAKVA 654



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 19/39 (48%), Positives = 24/39 (61%)

Query: 3  GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQV 41
          G    +  +LW  CAGPL  +P +G +V YFPQGH E V
Sbjct: 19 GSKSYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELV 57


>gi|79319169|ref|NP_001031139.1| auxin response factor 13 [Arabidopsis thaliana]
 gi|50429007|gb|AAT77165.1| ARF13 [Arabidopsis thaliana]
 gi|332193559|gb|AEE31680.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 479

 Score =  238 bits (607), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 133/340 (39%), Positives = 189/340 (55%), Gaps = 39/340 (11%)

Query: 11  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 70
           +LW+ CAGPL  LP  G +V YFPQGH E +  +T  E+D HI    +LP +L C++  +
Sbjct: 25  KLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELD-HIRPIFDLPSKLRCRVVAI 83

Query: 71  TMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYF-CKTLTASDTSTHGG 129
               D  TDEVYAQ++L P + E      +     + +++P  YF  K LTASD S  GG
Sbjct: 84  DRKVDKNTDEVYAQISLMPDTTE-----VMTHNTTMDTRRPIVYFFSKILTASDVSLSGG 138

Query: 130 FSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT--GWSVF 187
             +P++ A + FP LD S     Q L+A+DL+  EW F+H+FRG P+RH+ T+  GWSVF
Sbjct: 139 LIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSGGGWSVF 198

Query: 188 VSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAAT 247
            + KRL+ GD  + +  E  +L  GIRRA      +PSSV+S++ M  G++A+  +A  T
Sbjct: 199 ATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHGVIASVVNAFKT 258

Query: 248 NSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGI 307
              F V + P                             RM FE ++ S +RY GTI G+
Sbjct: 259 KCMFNVVYKP-----------------------------RMQFEGKDFSEKRYDGTIIGV 289

Query: 308 SDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 347
           +D+ P  W +S WRS+KV WDE +   R  +VS W+IE L
Sbjct: 290 NDMSP-HWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHL 328


>gi|297846440|ref|XP_002891101.1| hypothetical protein ARALYDRAFT_336503 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297336943|gb|EFH67360.1| hypothetical protein ARALYDRAFT_336503 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 578

 Score =  238 bits (607), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 129/314 (41%), Positives = 184/314 (58%), Gaps = 24/314 (7%)

Query: 45  TNKEVDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQP-----LSPEEQKDTF 99
           T+  +   +P     PP L  ++  + +  +  +DE YA++TL P     + P + ++ F
Sbjct: 18  THHTISHTLPCKAKQPPPLQRRVIAIQLKVERNSDETYAEITLMPNTTQVVIPTQNENQF 77

Query: 100 VPIELGIPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARD 159
            P+          N F K LTASDTS HGGFSVPR+ A +  P LD S   PAQEL+  D
Sbjct: 78  RPL---------VNSFTKVLTASDTSAHGGFSVPRKLAIECLPPLDMSQPLPAQELLTID 128

Query: 160 LHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRP 219
           LH  +W+F+H +RG P+RHLLTTGW+ F+++K+LVAGD ++F+  E  +L + IRRA   
Sbjct: 129 LHGNQWRFKHSYRGTPRRHLLTTGWNAFITSKKLVAGDVIVFLRGETGELRVSIRRARYQ 188

Query: 220 PTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPR--------ASPSEFVIPLTKY 271
              +PSS++S +SM  G++A+A HA      F V + PR           S+F++   K+
Sbjct: 189 QGNIPSSLISIESMRHGVIASAKHAFDNQCMFIVVYKPRFIFCVCISIRSSQFIVNYDKF 248

Query: 272 VKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDEST 331
           + AV + + +VG RF M FE E  S RRY GTI G+SD  P  W  S WRS+KV WDE  
Sbjct: 249 LDAV-NNKFNVGSRFTMRFEEENFSERRYFGTIIGVSDFSP-HWKCSEWRSLKVQWDEFA 306

Query: 332 AGERQPRVSLWEIE 345
           +  R  +VS WEI+
Sbjct: 307 SFPRPDKVSPWEIK 320



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 43/110 (39%), Positives = 69/110 (62%), Gaps = 8/110 (7%)

Query: 657 GCMQDSSELLHNVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGI 715
           G M+ + E+     Q  QL+ TRT  KV   G ++GR+LD+S  + Y++L  EL ++F +
Sbjct: 466 GQMRSTREI-----QSKQLSSTRTCTKVQMHGVTLGRALDLSVLNGYDQLILELEKLFDL 520

Query: 716 EGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQ 765
           +G+ ++  R+ W++VF D E D +L+GDDPW  F + V  I I S E+V+
Sbjct: 521 KGQLQN--RNQWEIVFTDNEEDEMLVGDDPWPEFCNMVKKIIIYSKEEVK 568


>gi|238478721|ref|NP_001154393.1| auxin response factor 13 [Arabidopsis thaliana]
 gi|332193560|gb|AEE31681.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 546

 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 133/340 (39%), Positives = 189/340 (55%), Gaps = 39/340 (11%)

Query: 11  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 70
           +LW+ CAGPL  LP  G +V YFPQGH E +  +T  E+D HI    +LP +L C++  +
Sbjct: 25  KLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELD-HIRPIFDLPSKLRCRVVAI 83

Query: 71  TMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYF-CKTLTASDTSTHGG 129
               D  TDEVYAQ++L P + E      +     + +++P  YF  K LTASD S  GG
Sbjct: 84  DRKVDKNTDEVYAQISLMPDTTE-----VMTHNTTMDTRRPIVYFFSKILTASDVSLSGG 138

Query: 130 FSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT--GWSVF 187
             +P++ A + FP LD S     Q L+A+DL+  EW F+H+FRG P+RH+ T+  GWSVF
Sbjct: 139 LIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSGGGWSVF 198

Query: 188 VSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAAT 247
            + KRL+ GD  + +  E  +L  GIRRA      +PSSV+S++ M  G++A+  +A  T
Sbjct: 199 ATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHGVIASVVNAFKT 258

Query: 248 NSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGI 307
              F V + P                             RM FE ++ S +RY GTI G+
Sbjct: 259 KCMFNVVYKP-----------------------------RMQFEGKDFSEKRYDGTIIGV 289

Query: 308 SDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 347
           +D+ P  W +S WRS+KV WDE +   R  +VS W+IE L
Sbjct: 290 NDMSP-HWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHL 328



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 60/106 (56%), Gaps = 4/106 (3%)

Query: 681 FVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVL 739
             KV+  G ++ R++D++    YN+L ++L ++F ++ +     R+ W++VF + E   +
Sbjct: 435 LTKVHMQGVAISRAVDLTAMHGYNQLIQKLEELFDLKDELRT--RNQWEIVFTNNEGAEM 492

Query: 740 LLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANS 785
           L+GDDPW  F +    I I S E+++KM  +  + F P S    +S
Sbjct: 493 LVGDDPWPEFCNMAKRIFICSKEEIKKMKLKN-KFFQPESKALTSS 537


>gi|87240937|gb|ABD32795.1| Transcriptional factor B3; Auxin response factor [Medicago
           truncatula]
          Length = 648

 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 143/401 (35%), Positives = 203/401 (50%), Gaps = 61/401 (15%)

Query: 5   NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLI 64
           NK ++ +LWHA AG +V +P V ++V YFPQGH+E      N    S IP++      + 
Sbjct: 25  NKSVDPQLWHAVAGGMVQMPEVNSQVFYFPQGHAEHACEPVNFSSYSKIPSF------IP 78

Query: 65  CQLHNVTMHADVETDEVYAQMTLQPLSPEE---QKDTFVPIELGIPSKQPTNYFCKTLTA 121
           C++  +   A+ ETDEVYA++ L P++  +     D    I +   +K     F KTLT 
Sbjct: 79  CRVEAIRYMANHETDEVYAKLRLVPMNINQVSFDNDGVAGINVS-ETKDKHQSFAKTLTQ 137

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SD +  GGFS PR  AE +FP LD+S  PP Q++  +D+H  +W FRH++RG PKRHLLT
Sbjct: 138 SDANNGGGFSCPRYCAETLFPRLDYSANPPLQDIFPKDVHGEKWHFRHVYRGTPKRHLLT 197

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVM--PSSVLSSDSMHIGLLA 239
           TGWS FVS K+L +GDS++F+ +E   L +GIRRA R   V   P S   S S  IG+ A
Sbjct: 198 TGWSPFVSDKKLASGDSIVFLRSENGDLHVGIRRAKRRNNVGVDPLSGWKSGS-GIGICA 256

Query: 240 A---------------------------------------------AAHAAATNSCFTVF 254
           A                                             A         F V 
Sbjct: 257 APPYGGFPSFSGEEDNKLRRNGKGNGLLISDGMMGRGKVKALEVIEAVRLGTNMQPFDVV 316

Query: 255 FNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPV 313
           + PR+   EF +  T  +      R   GMRF+M  ETE+SS +  ++GT+  +   DP 
Sbjct: 317 YYPRSGTPEFFVK-TSLIGMALQIRWCPGMRFKMAIETEDSSRISWFIGTVASVQAADP- 374

Query: 314 RWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYP 354
            WS+S WR ++V WDE    +   RV+ W++E ++  P  P
Sbjct: 375 SWSDSMWRLLEVTWDEPELLKNVKRVNPWQVEIVSNMPSIP 415


>gi|414875582|tpg|DAA52713.1| TPA: hypothetical protein ZEAMMB73_730460 [Zea mays]
          Length = 624

 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 142/387 (36%), Positives = 199/387 (51%), Gaps = 85/387 (21%)

Query: 4   DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQL 63
           D + L  ELW ACAGPLV LP    RV YF QGH EQ+   T+  + +       +P ++
Sbjct: 8   DPEELFEELWRACAGPLVELPQTNERVFYFLQGHLEQLQEPTDPALLAEQIKMFQVPNKI 67

Query: 64  ICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASD 123
           +C+       A+ ETDE+YAQ+TLQP   +          L   S+   + FCK LT SD
Sbjct: 68  LCK-------AETETDEMYAQITLQPEPDQVDLPQLPEPPLQETSRPVVHSFCKILTPSD 120

Query: 124 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 183
           TSTHGGFSV RR A +  P+LD S+  P QELI +DLH  EW+F+HI+RGQP+RHLLTTG
Sbjct: 121 TSTHGGFSVLRRHANECLPALDMSMPTPTQELITKDLHGSEWRFKHIYRGQPRRHLLTTG 180

Query: 184 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAH 243
           WS FV++K+L+AGD+ +++   ++Q ++ + + +             +S  IG       
Sbjct: 181 WSTFVTSKKLIAGDAFVYLRLSQSQYIVRLNKYL-------------ESSKIGF------ 221

Query: 244 AAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGT 303
                                                 VGMRF+M FE ++  ++++ GT
Sbjct: 222 -------------------------------------DVGMRFKMSFEGDDVPIKKFSGT 244

Query: 304 ITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL------TTFPMYPSLF 357
           +    DL P +W  S W+++KV WDE+T      RVS WEIEP        T P+ PS  
Sbjct: 245 VVDKGDLSP-QWQGSEWKTLKVKWDEATNLNGPERVSSWEIEPFDASAPAITMPVQPS-- 301

Query: 358 PLRLKRPWHPSTSSFNDNRDETASGLN 384
            ++ KRP             ETA GL+
Sbjct: 302 -MKNKRP------------RETAEGLD 315



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 8/112 (7%)

Query: 671 QIDQLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQL 729
           Q  Q    R+ +KV   G+ V R++D+     Y +L  E+G+MF I+       +  W++
Sbjct: 514 QSHQSCSGRSRIKVQMHGNDVCRAVDLGNLDGYEQLMGEVGEMFEIK-DLGSKEKEEWKV 572

Query: 730 VFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQ 781
            F++ EN+ + +G  PW+ F   V  I I S      +G++G     P  GQ
Sbjct: 573 TFINDENETMEVGAVPWQEFCQMVRKIVIHS------IGDRGHMEACPCLGQ 618


>gi|357510693|ref|XP_003625635.1| Auxin response factor [Medicago truncatula]
 gi|355500650|gb|AES81853.1| Auxin response factor [Medicago truncatula]
          Length = 1252

 Score =  235 bits (599), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 143/401 (35%), Positives = 203/401 (50%), Gaps = 61/401 (15%)

Query: 5   NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLI 64
           NK ++ +LWHA AG +V +P V ++V YFPQGH+E      N    S IP++      + 
Sbjct: 25  NKSVDPQLWHAVAGGMVQMPEVNSQVFYFPQGHAEHACEPVNFSSYSKIPSF------IP 78

Query: 65  CQLHNVTMHADVETDEVYAQMTLQPLSPEE---QKDTFVPIELGIPSKQPTNYFCKTLTA 121
           C++  +   A+ ETDEVYA++ L P++  +     D    I +   +K     F KTLT 
Sbjct: 79  CRVEAIRYMANHETDEVYAKLRLVPMNINQVSFDNDGVAGINVS-ETKDKHQSFAKTLTQ 137

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SD +  GGFS PR  AE +FP LD+S  PP Q++  +D+H  +W FRH++RG PKRHLLT
Sbjct: 138 SDANNGGGFSCPRYCAETLFPRLDYSANPPLQDIFPKDVHGEKWHFRHVYRGTPKRHLLT 197

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVM--PSSVLSSDSMHIGLLA 239
           TGWS FVS K+L +GDS++F+ +E   L +GIRRA R   V   P S   S S  IG+ A
Sbjct: 198 TGWSPFVSDKKLASGDSIVFLRSENGDLHVGIRRAKRRNNVGVDPLSGWKSGS-GIGICA 256

Query: 240 A---------------------------------------------AAHAAATNSCFTVF 254
           A                                             A         F V 
Sbjct: 257 APPYGGFPSFSGEEDNKLRRNGKGNGLLISDGMMGRGKVKALEVIEAVRLGTNMQPFDVV 316

Query: 255 FNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPV 313
           + PR+   EF +  T  +      R   GMRF+M  ETE+SS +  ++GT+  +   DP 
Sbjct: 317 YYPRSGTPEFFVK-TSLIGMALQIRWCPGMRFKMAIETEDSSRISWFIGTVASVQAADP- 374

Query: 314 RWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYP 354
            WS+S WR ++V WDE    +   RV+ W++E ++  P  P
Sbjct: 375 SWSDSMWRLLEVTWDEPELLKNVKRVNPWQVEIVSNMPSIP 415



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 123/344 (35%), Positives = 177/344 (51%), Gaps = 43/344 (12%)

Query: 12   LWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNVT 71
            LWHA AG +V +P V ++V YFPQGH+E      N    S IP++      + C++ ++ 
Sbjct: 810  LWHAIAGGMVQMPEVNSQVFYFPQGHAEHACEPVNFSAYSKIPSF------IPCRVEDIR 863

Query: 72   MHADVETDEVYAQMTLQPLSPEE---QKDTFVPIELGIPSKQPTNYFCKTLTASDTSTHG 128
              A+ ETDEVYA++ L P++  +     D    I +   +K     F KTLT SD +  G
Sbjct: 864  YMANHETDEVYAKLRLVPMNINQVSFDNDGVAGINVS-ETKDKHQSFAKTLTQSDANNGG 922

Query: 129  GFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFV 188
            GFS PR  AE +FP +D+S  PP Q +  +D+H  +W FRH++RG PKRHLLTTGWS FV
Sbjct: 923  GFSCPRYCAEMIFPRMDYSGNPPFQGIYPKDVHGEKWHFRHVYRGTPKRHLLTTGWSPFV 982

Query: 189  SAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPS----------------------- 225
            S K+L +GDSV+F+ +E  +L +GI R      + P+                       
Sbjct: 983  SDKKLASGDSVVFLRSENGELRVGIWREKSGIGICPAPPYGGFTSFSEEEDNKLRRNGKG 1042

Query: 226  -SVLSSDSM------HIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHT 278
              +L SD M       +  +  A         F V + PR+   EF +  T  +      
Sbjct: 1043 NGLLISDGMMGRGKVKVLEVIEAVRLGTNMQPFDVVYYPRSGTPEFFVK-TSLIGITLQI 1101

Query: 279  RVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWR 321
            R   GMRF+M  ETE+SS +  ++GT+  +   DP  W +S WR
Sbjct: 1102 RWCPGMRFKMPIETEDSSRISWFIGTVASVQAADP-SWPDSLWR 1144


>gi|326502568|dbj|BAJ95347.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 388

 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 137/351 (39%), Positives = 194/351 (55%), Gaps = 42/351 (11%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G  + ++++LW ACAG + ++P VG  V YFPQGH+EQ  A  +            +P  
Sbjct: 15  GQPRSVDAQLWLACAGSMCTVPPVGAAVYYFPQGHAEQATAAVDLSAAC-------VPAL 67

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTN------YFC 116
           L C++  V   AD  +DEV+A++ L PL      D  V +       +P +       F 
Sbjct: 68  LPCRVSAVRFMADAHSDEVFAKIRLVPL---RHGDPAVDVGDAAAQGRPQDDRPKPASFA 124

Query: 117 KTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPK 176
           KTLT SD +  GGFSVPR  AE +FP+LD+S +PP Q ++ RD+H  E+KFRHI+RG P+
Sbjct: 125 KTLTQSDANNGGGFSVPRFCAETIFPALDYSSEPPVQSIVVRDVHGDEFKFRHIYRGTPR 184

Query: 177 RHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIG 236
           RHLLTTGWS FV+ K+L+AGDS++F+ ++  ++ +G+RRA R   V      S    + G
Sbjct: 185 RHLLTTGWSNFVNQKKLLAGDSIVFLRSDGGEVHVGVRRAKR---VFCDEGHSGWDHYRG 241

Query: 237 LL----AAAAHAAATNSC-----------------FTVFFNPRASPSEFVIPLTKYVKAV 275
           L+    A +  AAA                     F V + PRAS  EF +     V+A 
Sbjct: 242 LMRGGNAGSGDAAAKGKVPAEDVVAAARLAAAGQPFEVVYYPRASTPEFCV-RAGAVRAA 300

Query: 276 FHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKV 325
              +   GMRF+M FETE+SS +  +MGT+ GI   DP RW  S WR ++V
Sbjct: 301 MQVQWRPGMRFKMAFETEDSSRISWFMGTVAGIHAADPSRWPQSPWRLLQV 351


>gi|327493279|gb|AEA86346.1| auxin response factor [Solanum nigrum]
          Length = 139

 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 109/123 (88%), Positives = 116/123 (94%), Gaps = 1/123 (0%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ KCLNSELWHACAGPLVSLP VG+RVVYFPQGHSEQVAA+TNKEVD+HIPNYP LPPQ
Sbjct: 17  GEKKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPGLPPQ 76

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKD-TFVPIELGIPSKQPTNYFCKTLTA 121
           LICQLHN+TMHADVETDEVYAQMTLQPLSP+EQKD   +P ELGIPSKQPTNYFCKTLTA
Sbjct: 77  LICQLHNLTMHADVETDEVYAQMTLQPLSPQEQKDVCLLPAELGIPSKQPTNYFCKTLTA 136

Query: 122 SDT 124
           SDT
Sbjct: 137 SDT 139


>gi|58802748|gb|AAW82475.1| auxin response factor 2 [Triticum aestivum]
          Length = 202

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 114/204 (55%), Positives = 151/204 (74%), Gaps = 2/204 (0%)

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
           AS TSTHGGFSV RR A++  P LD +  PP QEL+A+DLH +EW+FRHIFRGQP+RHLL
Sbjct: 1   ASGTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMEWRFRHIFRGQPRRHLL 60

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 240
            +GWSVFVS+KRLVAGD+ +F+  E  +L +G+RRA+R  + + SSV+SS SMH+G+LA 
Sbjct: 61  QSGWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRAMRQLSNIASSVISSHSMHLGVLAT 120

Query: 241 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 300
           A HA  T + FTV++ PR S SEF+IP  KY+ +V +   S+G RF+M FE EE+  +R+
Sbjct: 121 AWHAINTKTMFTVYYKPRTSRSEFIIPYDKYMDSVKNI-YSIGTRFKMRFEGEEAPEQRF 179

Query: 301 MGTITGISDLDPVRWSNSHWRSVK 324
            GTI G  +LD + W  S WRS+K
Sbjct: 180 TGTIVGSDNLDQL-WPESSWRSLK 202


>gi|297599632|ref|NP_001047488.2| Os02g0628600 [Oryza sativa Japonica Group]
 gi|255671107|dbj|BAF09402.2| Os02g0628600 [Oryza sativa Japonica Group]
          Length = 381

 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 136/355 (38%), Positives = 190/355 (53%), Gaps = 32/355 (9%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G  +C++ +LW ACAG + ++P VG  V YFPQGH+E        E+ +       +P  
Sbjct: 13  GAERCVDRQLWLACAGGMCTVPPVGAAVYYFPQGHAEHALGLAAPELSAA-----RVPAL 67

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           + C++ +V   AD +TDEV+A++ L PL   E  D            +    F KTLT S
Sbjct: 68  VPCRVASVRYMADPDTDEVFARIRLVPLRAAEDGDVEEDGAAAGEEHEKPASFAKTLTQS 127

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           D +  GGFSVPR  AE +FP LD++  PP Q ++A+D+H V W FRHI+RG P+RHLLTT
Sbjct: 128 DANNGGGFSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGVAWNFRHIYRGTPRRHLLTT 187

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR----PPTVMPSSVLSSDSMHIGL- 237
           GWS FV+ K+LVAGDS++F+  +   L +GIRRA R           + L     + GL 
Sbjct: 188 GWSTFVNQKKLVAGDSIVFLRGDGGDLHVGIRRAKRGFCGGGGGAEEASLPGWDQYGGLM 247

Query: 238 --------------------LAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFH 277
                               L  AA  A     F V + PRAS  EF +     V+A   
Sbjct: 248 RGNASPCAAAKGRGKVRAEDLVEAARLANGGQPFEVVYYPRASTPEFCV-RAAAVRAAMR 306

Query: 278 TRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDEST 331
            +   GMRF+M FETE+SS +  +MGT+  +   DP+RW  S WR ++V ++  T
Sbjct: 307 VQWCPGMRFKMAFETEDSSRISWFMGTVASVQVADPIRWPQSPWRLLQVRYNIYT 361


>gi|357461711|ref|XP_003601137.1| Auxin response factor [Medicago truncatula]
 gi|355490185|gb|AES71388.1| Auxin response factor [Medicago truncatula]
          Length = 593

 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 142/390 (36%), Positives = 202/390 (51%), Gaps = 42/390 (10%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           LN +LW A AG  V +PTV +RV YFPQGH +Q  +  N      +       P ++C +
Sbjct: 16  LNPKLWRAIAGAAVQIPTVNSRVYYFPQGHMDQATSLPNNLSPLLLSR-----PYILCSV 70

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTH 127
             V   AD +TDEV+A++ LQPL+        +P+ +     +  + F K LT SD +  
Sbjct: 71  SAVHFLADPKTDEVFAKLFLQPLNDFTVNFPRIPV-IEADDGERISSFAKILTPSDANNG 129

Query: 128 GGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 187
           GGFSVPR  A+ +FP LD+S+ PP Q L+  D+H + W+FRHI+RG P+RHLLTTGWS F
Sbjct: 130 GGFSVPRFCADSIFPPLDYSMDPPLQNLLITDVHGLTWEFRHIYRGTPRRHLLTTGWSKF 189

Query: 188 VSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAAT 247
           V+AK+LVAGDSV+F+ N +  + +GIRRA+R      SS + SD   + L      +   
Sbjct: 190 VNAKKLVAGDSVVFMKNTRGAMFIGIRRAVRFVPNRTSSGVCSDVSRLCLPICGVRSRVD 249

Query: 248 NS---------------------------------CFTVFFNPRASPSEFVIPLTKYVKA 274
           +                                   F V + PRA  S+FV+   + V A
Sbjct: 250 DEEKLVEEKAFSRHGKGKLSPVAVAEAAEMAAQGMGFEVVYYPRAGWSDFVLK-AEVVDA 308

Query: 275 VFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAG 333
                   GMR +M  ET++SS    + G ++ +S  D   W  S WR + + WDE    
Sbjct: 309 AMSVTWCPGMRIKMAVETDDSSRTTWFQGVVSQVSVPDHGAWRGSPWRMLHITWDEPEVL 368

Query: 334 ERQPRVSLWEIEPLTTFPMYPSLFPLRLKR 363
           +    VS W++E L+T P   + FP  LKR
Sbjct: 369 QTSKWVSPWQVELLSTTPSLHTPFP-PLKR 397


>gi|356570939|ref|XP_003553640.1| PREDICTED: auxin response factor 2-like [Glycine max]
          Length = 630

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 145/392 (36%), Positives = 207/392 (52%), Gaps = 56/392 (14%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSH--IPNYPNLP 60
           G    L +ELW ACAG  V +P     V+YFPQGH EQVAA T  + D H  IP Y +LP
Sbjct: 16  GVKDSLYTELWRACAGSFVYVPREEETVLYFPQGHLEQVAAYTQHQQDGHMEIPVY-DLP 74

Query: 61  PQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLT 120
            +++C++ ++ + A+  +DEVYAQ+TL P   ++     V     IPS   T  F K LT
Sbjct: 75  SKILCKIMHIELKAEAFSDEVYAQVTLVPALKQDNLRLEVEENDQIPSITTTYTFSKILT 134

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
            SDTSTHGGFSVP++ A++ FP LD + Q PAQE++A+DL+                   
Sbjct: 135 PSDTSTHGGFSVPKKHADECFPPLDMTQQTPAQEIVAKDLNGA----------------- 177

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR--PPTVMPSSVLSSDSMHIGLL 238
                                   E  ++ +GIRRA          SS++S  SM +G+L
Sbjct: 178 ------------------------ESGEIRVGIRRATEHLSNVSQSSSLISGHSMQLGIL 213

Query: 239 AAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVR 298
           A+A+HA ++ + F V+++P  +P EF++PL  Y+K+       +GMR +M  E EE S+R
Sbjct: 214 ASASHAVSSGTMFIVYYHPWTNPFEFIVPLRTYLKSTV-PDYPIGMRVQMQHEVEE-SLR 271

Query: 299 RYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQP-RVSLWEIEPLTT------FP 351
           R+ GTI G  D+D +RW  S WR +KV WD     +  P RV  W IEPL +       P
Sbjct: 272 RHAGTIIGHEDIDKIRWPGSEWRCLKVQWDAVLDDKMNPERVCPWWIEPLESAKEKKQVP 331

Query: 352 MYPSL-FPLRLKRPWHPSTSSFNDNRDETASG 382
             P+    L L +   P  SSF  +  + ++G
Sbjct: 332 ALPTTKKALALNQRSLPGISSFGMHDGQNSAG 363



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 10/108 (9%)

Query: 679 RTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 737
           R+  KV K G+ +GR++D++RF  Y EL  EL  MF   G   +   SGW +  +D + D
Sbjct: 531 RSCTKVLKLGTALGRAVDLARFHGYTELIAELDSMFEFRGSLINE-SSGWHVTCMDDDGD 589

Query: 738 VLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANS 785
           ++ LGD PW+ F   V  + I+ P       ++G  +  PSS    +S
Sbjct: 590 MMQLGDYPWQDFQGVVQKM-IICP-------KEGTNNIKPSSSANPSS 629


>gi|379323244|gb|AFD01321.1| auxin response factor 26 [Brassica rapa subsp. pekinensis]
          Length = 555

 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 127/347 (36%), Positives = 192/347 (55%), Gaps = 29/347 (8%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G N  L  +LW  CAGPL   P +G           E++  + N E+    P + N+P +
Sbjct: 18  GTNNYLYDQLWKLCAGPLFDPPKIG-----------EELVTSINDELCQLKPVF-NIPSK 65

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           + C + ++ +  +  TDE+YA+++L P + E +    +P      + Q    F K L+AS
Sbjct: 66  IRCNVFSIKLKVETTTDEIYAEISLLPDTSEVE----IPTSKCENNIQNIKCFTKVLSAS 121

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DTS  GGF + +R A +  P LD S   P+QE+ A D+H  EWKF+H  +G PKRHL T+
Sbjct: 122 DTSKKGGFVLNKRHAIECLPPLDMSHLTPSQEINATDIHGHEWKFKHALKGTPKRHLFTS 181

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAI-RPPTVMPSSVLSSDSMHIGLLAAA 241
           GW+ F  AK+LV GDS +F+  E  +  +GI++A       +PSS++S +SMH G++A A
Sbjct: 182 GWNEFAKAKKLVVGDSFIFLRGENGESRVGIKKAAHHQQENIPSSIISKESMHHGVVATA 241

Query: 242 AHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYM 301
            +A      F VF+ PR+  S+FV+ + K+   V + + S+G RF M FE ++       
Sbjct: 242 LNAIKNKCMFVVFYKPRS--SQFVVNIDKFRDGV-NKKFSIGSRFLMKFEGKD------- 291

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 348
                IS+     W +S WR ++V WDE+    R  +VS WEIEPLT
Sbjct: 292 --FNEISERFLPHWKDSEWRCLEVQWDEAATIPRPDKVSPWEIEPLT 336



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/88 (38%), Positives = 56/88 (63%), Gaps = 2/88 (2%)

Query: 678 TRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 737
           TR+  KV   G++ R++D+S F  YN+L +EL ++F I+GK    + + W++VF++ + D
Sbjct: 443 TRSHTKVRMEGAMERTVDLSIFDGYNQLIDELERLFDIKGKLH--IHNQWKIVFINADGD 500

Query: 738 VLLLGDDPWEAFVSNVWYIKILSPEDVQ 765
           ++LLGDDPW  F +    I I S  D +
Sbjct: 501 IMLLGDDPWPKFCNTAEEIFICSKNDAK 528


>gi|379323226|gb|AFD01312.1| auxin response factor 16-2 [Brassica rapa subsp. pekinensis]
          Length = 694

 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 140/352 (39%), Positives = 192/352 (54%), Gaps = 48/352 (13%)

Query: 59  LPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSK-QPTNYFCK 117
           +PP ++C++  +   AD E+DEV+A++ L PL  ++          G  +  + T  F K
Sbjct: 100 IPPMVLCRVLAIKYMADPESDEVFAKLRLIPLKDDDHDYGDGQEGNGFETNSEKTPSFAK 159

Query: 118 TLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKR 177
           TLT SD +  GGFSVPR  AE +FP LD++ +PP Q ++A+D+H   WKFRHI+RG P+R
Sbjct: 160 TLTQSDANNGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRHIYRGTPRR 219

Query: 178 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR-----PPTVMP-------- 224
           HLLTTGWS FV+ K+LVAGDS++F+  E   L +GIRRA R      P   P        
Sbjct: 220 HLLTTGWSNFVNQKKLVAGDSIVFMRAESGDLCVGIRRAKRGGIGNGPEYSPGWNPIGGS 279

Query: 225 ---SSVLSSDSMH------------IGLLAA-----AAHAAATNSCFTVFFNPRASPSEF 264
              SS+L  D  +             G +AA     AA  A     F V + PRAS SEF
Sbjct: 280 CGYSSLLREDESNSLRRSNCSLADRKGKVAAESVIEAATLAINGRGFEVVYYPRASTSEF 339

Query: 265 VIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSV 323
            +      +A        GMRF+M FETE+SS +  +MGT++ +S  DP+RW NS WR +
Sbjct: 340 CVKALD-ARAAMRIPWCSGMRFKMAFETEDSSRISWFMGTVSAVSVSDPIRWPNSPWRLL 398

Query: 324 KVGWDESTAGERQPRVSLWEIE--------PLTTFPMYPSLFPLRLKRPWHP 367
           +V WDE    +   RV+ W +E        PLT+F   P    +RL  P HP
Sbjct: 399 QVAWDEPDLLQNVKRVNPWLVELVSNVHPIPLTSFS--PPRKKMRL--PQHP 446



 Score = 43.9 bits (102), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 80/180 (44%), Gaps = 34/180 (18%)

Query: 600 VGTENCNTDSQNS----VVFGVHIDSSGLLLPTTVSSFTTSVDPGVSSMPLGDSGFHNSM 655
           +GT  CN D+++     V+FG       L+LP    S   S D   +S   G S   +S 
Sbjct: 541 MGTTPCNDDTESKKSHIVLFG------KLILPEEQISEKGSTDTANTS---GGSKLSSSE 591

Query: 656 YGCMQDSSELLHNVGQIDQLTPTRTFVKVY-KSGSVGRSLDISRFSSYNELREELGQMFG 714
            G     S   H+   ++         KV+ +S  VGR+LD+S   SY EL  +L  MFG
Sbjct: 592 EG--SPCSNKAHDAAGLET-----GHCKVFMESDDVGRTLDLSVLGSYEELSRKLSDMFG 644

Query: 715 IEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVES 774
           I+    + L S   +++ D    +   G++P+  F+     + I++        EQG ES
Sbjct: 645 IQKA--EMLSS---VLYRDASGAIKYAGNEPFSEFLKTARRLTIVT--------EQGSES 691


>gi|85069283|gb|ABC69713.1| ETTb [Nicotiana tabacum]
          Length = 336

 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 110/231 (47%), Positives = 152/231 (65%), Gaps = 2/231 (0%)

Query: 133 PRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKR 192
           PRRAAE  FP LD+  Q P+QEL+A+DLH +EWKFRHI+RGQP+RHLLTTGWS FV+ K+
Sbjct: 1   PRRAAEDCFPPLDYRQQRPSQELVAKDLHGIEWKFRHIYRGQPRRHLLTTGWSAFVNKKK 60

Query: 193 LVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFT 252
           LV+GD+VLF+     +L LG+RRA +  T        S  +++  +    +A ++ + F+
Sbjct: 61  LVSGDAVLFLRTADGELRLGVRRAAQAKTCSNYLAAYSQLLNVSGIVDVVNAISSTNAFS 120

Query: 253 VFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDP 312
           + +NPRAS S F+IP  K+ K + H   S GMRF+M  ETE+++ +R+ G + G+SD+DP
Sbjct: 121 ICYNPRASSSGFIIPYHKFSKTLAHP-FSAGMRFKMRVETEDAAEQRFTGLVVGVSDVDP 179

Query: 313 VRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKR 363
           VRW  S WR + V WD+     R  RVS WEIEP  + P+  SL     KR
Sbjct: 180 VRWPGSKWRCLLVRWDDLDV-SRHNRVSPWEIEPSGSAPVSSSLVMPSAKR 229


>gi|85069281|gb|ABC69712.1| ETTa [Nicotiana tabacum]
          Length = 336

 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 109/231 (47%), Positives = 151/231 (65%), Gaps = 2/231 (0%)

Query: 133 PRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKR 192
           PRRAAE  FP LD+  Q P+QEL+A+DLH +EWKFRHI+RGQP+RHLLTTGWS FV+ K+
Sbjct: 1   PRRAAEDCFPPLDYRQQRPSQELVAKDLHGIEWKFRHIYRGQPRRHLLTTGWSAFVNRKK 60

Query: 193 LVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFT 252
           LV+GD+VLF+     +L LG+RRA +  T        S  +++  +     A ++ + F+
Sbjct: 61  LVSGDAVLFLRTADGELRLGVRRAAQAKTCSNYLAAYSQLLNVSGIVDVVKAISSTNAFS 120

Query: 253 VFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDP 312
           + +NPRAS S F++P  K+ K + H   S GMRF+M  ETE+++ +R+ G + G+SD+DP
Sbjct: 121 ICYNPRASSSGFILPYHKFSKTLAHP-FSAGMRFKMRVETEDAAEQRFTGLVVGVSDVDP 179

Query: 313 VRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKR 363
           VRW  S WR + V WD+     R  RVS WEIEP  + P+  SL     KR
Sbjct: 180 VRWPGSKWRCLLVRWDDLDV-SRHNRVSPWEIEPSGSAPVSSSLVMPSAKR 229


>gi|255545568|ref|XP_002513844.1| Auxin response factor, putative [Ricinus communis]
 gi|223546930|gb|EEF48427.1| Auxin response factor, putative [Ricinus communis]
          Length = 603

 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 147/445 (33%), Positives = 212/445 (47%), Gaps = 51/445 (11%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
            D + ++  +W ACAG  V +PT+ +RV YFPQGH EQ + +++      + +     P 
Sbjct: 9   ADLRRVDRRIWRACAGSSVQIPTINSRVYYFPQGHLEQSSNSSSIVSSCILSSIALSKPV 68

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVP----IELGIPSKQPTNY---- 114
           + CQ+  V   AD  TDEVY ++ L P+      D+F P    +E     +Q   Y    
Sbjct: 69  IPCQISAVQFLADPVTDEVYTKLLLFPI------DSFNPSVPVLEHSGNLEQHHGYDYDD 122

Query: 115 -------FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKF 167
                  F K LT SD +  GGFSVPR  A+ +FP L++  +PP Q L   D+H + W F
Sbjct: 123 DEDKIVAFAKILTPSDANNGGGFSVPRFCADSIFPPLNYHAEPPVQTLTVTDIHGITWDF 182

Query: 168 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSV 227
           RHI+RG P+RHLLTTGWS FV+ K+L+AGDSV+F+ N   ++ +G+RRA+RP        
Sbjct: 183 RHIYRGTPRRHLLTTGWSKFVNHKKLIAGDSVVFMRNMTGKMFIGVRRAVRPNNGGSDCA 242

Query: 228 LSSDSMHI---------------------------GLLAAAAHAAATNSCFTVFFNPRAS 260
              + +                               +  A   AA    F V + PRA 
Sbjct: 243 RWREQIACFGGGGGDVKMKVKEEGYSRNGRGKVSPEAVMEAVERAAQGFSFEVVYYPRAG 302

Query: 261 -PSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNS 318
             S+FV+  T  V        S GMR +M  ETE+SS +  + GTI   S  D   W  S
Sbjct: 303 WYSDFVV-RTDVVDGALAVCWSAGMRVKMAMETEDSSRMTWFQGTIASASLPDCGLWRGS 361

Query: 319 HWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWHPSTSSFNDNRDE 378
            WR ++V WDE    +   RVS W++E ++  P     FP   K  +  ++    D   E
Sbjct: 362 PWRMLQVAWDEPEVLQNAKRVSPWQVEYVSPSPPLHGAFPPAKKFRFPENSGFLTDGEGE 421

Query: 379 TASGLNWLRGGTGEQGLTTLNFQSL 403
               ++ L   T      +LN+ S 
Sbjct: 422 LFFPMSGLTNSTMGNINQSLNYHSF 446


>gi|293336069|ref|NP_001170351.1| uncharacterized protein LOC100384328 [Zea mays]
 gi|224035287|gb|ACN36719.1| unknown [Zea mays]
          Length = 326

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 119/199 (59%), Positives = 144/199 (72%), Gaps = 6/199 (3%)

Query: 574 KYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSF 633
           K+  SQ   F  S+SL +S   KD +V  +    D QN  +F   +DSS LL    V + 
Sbjct: 126 KFMGSQSMSFGGSVSL-NSPTSKDGSVDNK-VGRDVQNQSLFSPQVDSSSLLY-NMVPNL 182

Query: 634 TTSV-DPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGSVGR 692
           T++V D  +S+ P G +   + MYGC+ DSS LL N G+ D    TRTFVKVYKSGSVGR
Sbjct: 183 TSNVADNNISAFPSGSTYLQSPMYGCLDDSSGLLQNTGEND--PTTRTFVKVYKSGSVGR 240

Query: 693 SLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSN 752
           SLDI+RFS+Y ELREELGQMFGI+G+ +DP RSGWQLVFVDRENDVLLLGDDPWE+FV++
Sbjct: 241 SLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDRENDVLLLGDDPWESFVNS 300

Query: 753 VWYIKILSPEDVQKMGEQG 771
           VWYIKILSPEDV KMG+ G
Sbjct: 301 VWYIKILSPEDVHKMGKPG 319


>gi|350536255|ref|NP_001234237.1| auxin response factor 17 [Solanum lycopersicum]
 gi|313509556|gb|ADR66030.1| auxin response factor 17 [Solanum lycopersicum]
          Length = 622

 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 138/371 (37%), Positives = 197/371 (53%), Gaps = 38/371 (10%)

Query: 12  LWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNVT 71
           +W A AG  V +P VGTRV YFPQGH+E    T+   +       P +P  ++C++ +V 
Sbjct: 15  VWRAIAGNSVKIPPVGTRVYYFPQGHAEHATFTSPAVMS------PGMPAFILCRVLSVR 68

Query: 72  MHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTHGGFS 131
             A+ +TDEVYA++ L P+S  E  +  V +      +     F K LT SD +  GGFS
Sbjct: 69  FLAESDTDEVYARIFLHPISQSEVDE--VTMREEEVVEDEIVSFVKILTPSDANNGGGFS 126

Query: 132 VPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAK 191
           VPR  A+ ++P LDF  +PP Q L  RD+  V W+FRHI+RG P+RHLLTTGWS FV++K
Sbjct: 127 VPRFCADSIYPRLDFGAEPPVQNLSIRDIKGVAWEFRHIYRGTPRRHLLTTGWSKFVNSK 186

Query: 192 RLVAGDSVLFI-WNEKNQLLLGIRRAIR----------------------PPTVMPSSVL 228
           +LVAGDS +F+     NQL +G+RRAIR                       P V  S  +
Sbjct: 187 QLVAGDSAVFMRRTANNQLYVGVRRAIRRNDDSQKWTSSFLMREHINNGGSPDV--SWGI 244

Query: 229 SSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM 288
               M +  +AA A  AA    F V   PR + + FV+   + V+   +   +VGMR +M
Sbjct: 245 RKGRMTMEAVAAVAEKAARGVPFEVSCYPRDAWAGFVVK-AQEVQMALNMPWTVGMRVKM 303

Query: 289 LFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 347
             E E+SS    Y GT++ +   +   W  S WR +++ W+E    +   RV+ W++E  
Sbjct: 304 AVEAEDSSRTACYQGTVSSVILNESGPWRGSPWRMLQITWEEPEVPQHANRVNPWQVE-- 361

Query: 348 TTFPMYPSLFP 358
             FP  P   P
Sbjct: 362 -CFPPIPQFLP 371


>gi|413918947|gb|AFW58879.1| hypothetical protein ZEAMMB73_937745 [Zea mays]
          Length = 588

 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 137/369 (37%), Positives = 205/369 (55%), Gaps = 33/369 (8%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           ++ +LW+ACAGP  ++P VGT V YFPQGH+E   A  +  + +        PP + C++
Sbjct: 33  VHPQLWYACAGPTCTVPPVGTAVYYFPQGHAEHAGAAADANLHA--------PPFVPCRV 84

Query: 68  HNVTMHADVETDEVYAQMTLQPL-SPEEQKDT----FVPIELGIPSKQPTNYF---CKTL 119
             V   A+++TDE++ ++ L PL S E   D      V  E G   +QPT       KTL
Sbjct: 85  AGVRFMAELDTDEIFVKIRLDPLRSGEPLTDVGEAQVVNDEAG--QRQPTRPVISSAKTL 142

Query: 120 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 179
           T SD+ + G  SV R  AE +FP LD S++ P Q + ARD+H VEW FRH++RG P+R+L
Sbjct: 143 TKSDSYSGGSLSVRRTCAETIFPKLDKSIKRPQQLVSARDVHGVEWTFRHVYRGTPERNL 202

Query: 180 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPT-------VMPSSVLSSDS 232
           LTTGWS FV++K++V GDSV+F+  E   + +G+RRA R          ++  +   + +
Sbjct: 203 LTTGWSDFVNSKKIVIGDSVVFLREEDGTIHIGLRRAERASRRNAYGRQLVRGNASGTGA 262

Query: 233 MHIGLLAA------AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRF 286
              G+L A      A   AA  + F V   PRA+   F + +   ++A+       G+RF
Sbjct: 263 AADGVLRAEDVVAAAVTLAAAGNPFEVVHYPRATAPAFCVRVATVIEAL-QVSWCPGLRF 321

Query: 287 RMLFETEE-SSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 345
           +M FE ++ S +  +MGT+ G+   DP RW  S WR ++V WDE        R+S W++E
Sbjct: 322 KMAFEAKDLSRISWFMGTVAGVGPADPARWPLSPWRFLQVTWDEPELVRNMNRLSPWQVE 381

Query: 346 PLTTFPMYP 354
            + T P  P
Sbjct: 382 LVATMPNLP 390


>gi|310697414|gb|ADP06662.1| auxin response factor 13-1 [Solanum lycopersicum]
          Length = 451

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 121/309 (39%), Positives = 183/309 (59%), Gaps = 10/309 (3%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           GD+  L  E+W AC+G L+ +   G RV YFP+ H EQ+  ++N+E+   +    NLPP+
Sbjct: 20  GDDD-LCREIWKACSGSLLDVSKAGERVYYFPRLHVEQLEQSSNQELIEKL-QLSNLPPK 77

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDT--FVPIELGIPSKQPTNYFCKTLT 120
           ++C++ ++ +  + ET+EVYA+  L P   + +     F P++   P  Q    FCK LT
Sbjct: 78  ILCRVLHIRLLVEHETEEVYAETILIPNQDQNEPTAADFSPLDNPRPQFQS---FCKCLT 134

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
            SD  ++ G SVP + A K FP LD   + P QELIA+DL   EW+F+H  +GQP+RH L
Sbjct: 135 QSDIKSNWGLSVPLKDAVKCFPPLDMRQEKPCQELIAKDLKGNEWRFKHAHQGQPRRHSL 194

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 240
           T GWS FV++K+L+AGD V+F+ +E  +L +GIRR       + +S  S  SM + +LA 
Sbjct: 195 TNGWSTFVTSKKLLAGDLVVFLRDETGKLHVGIRRLSYQHCSVGASTFSRQSMEV-VLAV 253

Query: 241 AAHAAATNSCFTVFFNPRASP-SEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRR 299
           A+HA AT S F V+  P  +  S+F++ ++KY +   H  + VGM  RM  E+E+    R
Sbjct: 254 ASHAFATKSLFFVYQKPCYNKSSQFIMSMSKYFEGGNHG-IGVGMISRMQIESEDYCHVR 312

Query: 300 YMGTITGIS 308
               +  IS
Sbjct: 313 RTNDLEQIS 321


>gi|353703790|ref|NP_001238801.1| auxin response factor 13 [Solanum lycopersicum]
 gi|310697412|gb|ADP06661.1| auxin response factor 13 [Solanum lycopersicum]
          Length = 472

 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 121/309 (39%), Positives = 183/309 (59%), Gaps = 10/309 (3%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           GD+  L  E+W AC+G L+ +   G RV YFP+ H EQ+  ++N+E+   +    NLPP+
Sbjct: 20  GDDD-LCREIWKACSGSLLDVSKAGERVYYFPRLHVEQLEQSSNQELIEKL-QLSNLPPK 77

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDT--FVPIELGIPSKQPTNYFCKTLT 120
           ++C++ ++ +  + ET+EVYA+  L P   + +     F P++   P  Q    FCK LT
Sbjct: 78  ILCRVLHIRLLVEHETEEVYAETILIPNQDQNEPTAADFSPLDNPRPQFQS---FCKCLT 134

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
            SD  ++ G SVP + A K FP LD   + P QELIA+DL   EW+F+H  +GQP+RH L
Sbjct: 135 QSDIKSNWGLSVPLKDAVKCFPPLDMRQEKPCQELIAKDLKGNEWRFKHAHQGQPRRHSL 194

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 240
           T GWS FV++K+L+AGD V+F+ +E  +L +GIRR       + +S  S  SM + +LA 
Sbjct: 195 TNGWSTFVTSKKLLAGDLVVFLRDETGKLHVGIRRLSYQHCSVGASTFSRQSMEV-VLAV 253

Query: 241 AAHAAATNSCFTVFFNPRASP-SEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRR 299
           A+HA AT S F V+  P  +  S+F++ ++KY +   H  + VGM  RM  E+E+    R
Sbjct: 254 ASHAFATKSLFFVYQKPCYNKSSQFIMSMSKYFEGGNHG-IGVGMISRMQIESEDYCHVR 312

Query: 300 YMGTITGIS 308
               +  IS
Sbjct: 313 RTNDLEQIS 321


>gi|296080887|emb|CBI18816.3| unnamed protein product [Vitis vinifera]
          Length = 202

 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 103/137 (75%), Positives = 115/137 (83%)

Query: 47  KEVDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGI 106
           K ++S  P +P+L P L+      +   + ETDEVYAQMTLQPLSP+EQKD ++P ELG+
Sbjct: 66  KTLNSRRPPFPSLLPSLLFSFSLHSSFFNFETDEVYAQMTLQPLSPQEQKDAYLPAELGV 125

Query: 107 PSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWK 166
           PSKQP+NYFCKTL ASDTSTHGGFSVPRRAAEKVFP LDFS QPPAQELIARDLHD EWK
Sbjct: 126 PSKQPSNYFCKTLIASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWK 185

Query: 167 FRHIFRGQPKRHLLTTG 183
           FRHIFRGQPKRHLLTTG
Sbjct: 186 FRHIFRGQPKRHLLTTG 202


>gi|326487181|dbj|BAJ89575.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 449

 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 114/199 (57%), Positives = 141/199 (70%), Gaps = 6/199 (3%)

Query: 574 KYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSF 633
           K+  SQ   F  S  L SS   KD ++ ++   +D QN  +F   +DSS LL     +  
Sbjct: 249 KFMGSQSLSFGGS-GLLSSPTSKDGSLESK-IGSDVQNQSLFSPQVDSSSLLYNMVPNMA 306

Query: 634 TTSVDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPT-RTFVKVYKSGSVGR 692
           +   D  +S++P G +   + MYGC+ DSS +  N G+ D   PT RTFVKVYKSGSVGR
Sbjct: 307 SNVADNSMSTIPSGSTYLQSPMYGCLDDSSGIFQNTGEND---PTSRTFVKVYKSGSVGR 363

Query: 693 SLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSN 752
           SLDI+RFS+Y ELREELGQMFGI G+ +DP RSGWQLVFVDRENDVLLLGDDPWE+FV++
Sbjct: 364 SLDITRFSNYAELREELGQMFGIRGQLDDPDRSGWQLVFVDRENDVLLLGDDPWESFVNS 423

Query: 753 VWYIKILSPEDVQKMGEQG 771
           VWYIKILSPEDV K+G+QG
Sbjct: 424 VWYIKILSPEDVHKLGKQG 442


>gi|296088132|emb|CBI35553.3| unnamed protein product [Vitis vinifera]
          Length = 187

 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 97/110 (88%), Positives = 104/110 (94%)

Query: 75  DVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTHGGFSVPR 134
           + ETDEVYAQMTLQPLSP+EQKD ++P ELG+PSKQP+NYFCKTL ASDTSTHGGFSVPR
Sbjct: 67  NFETDEVYAQMTLQPLSPQEQKDAYLPAELGVPSKQPSNYFCKTLIASDTSTHGGFSVPR 126

Query: 135 RAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 184
           RAAEKVFPSLDFS QPPAQELIARDLHD EWKFRHIFRGQPKRHLLTTG+
Sbjct: 127 RAAEKVFPSLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGY 176


>gi|24785191|dbj|BAC23059.1| hypothetical protein [Nicotiana tabacum]
          Length = 648

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 119/303 (39%), Positives = 180/303 (59%), Gaps = 10/303 (3%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           GDN  L  E+W AC+G L+ +P +G RV YFP+ H +Q+  ++N E    +    +LP +
Sbjct: 16  GDN-ALCREIWRACSGSLLDVPKLGERVHYFPRLHMDQLEQSSNLEWIQGL-QLSHLPRK 73

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDT--FVPIELGIPSKQPTNYFCKTLT 120
           ++C++ ++ +  + +T+EVYA+  L P   + +  T  F P+E   P +     FCK LT
Sbjct: 74  ILCRVLHIRLLVEHDTEEVYAETILLPNQEQNEPSTPEFCPLE---PPRPQYQSFCKALT 130

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
            SD  ++ G SV R+ A K FP LD   + P QELI  DL   EW+F+H+F+GQP+RHLL
Sbjct: 131 TSDIKSNWGLSVHRKDANKCFPPLDMMQEKPTQELIVNDLQGNEWRFKHVFQGQPRRHLL 190

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAA 240
             GWS FV++K+L+AGD V+F+ +E  +L +GIRR       + SS  S  SM  G+LA 
Sbjct: 191 KHGWSTFVTSKKLLAGDLVVFLRDETGKLHVGIRRLSYQCNSVGSSTFSRQSME-GVLAV 249

Query: 241 AAHAAATNSCFTVFFNPRAS-PSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRR 299
           A+HA AT S F+V++ P  +  S+F++ L+ Y +   H    VG   R    + +S V+R
Sbjct: 250 ASHAFATRSLFSVYYKPCYNRSSQFIMSLSNYFEGGNHG-PGVGTISRTQHTSLDSHVKR 308

Query: 300 YMG 302
             G
Sbjct: 309 TSG 311


>gi|356507684|ref|XP_003522594.1| PREDICTED: uncharacterized protein LOC100793208 [Glycine max]
          Length = 1160

 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 142/408 (34%), Positives = 203/408 (49%), Gaps = 46/408 (11%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           L+  LW  CAG  V +PT+ +RV YFPQGH +Q A++  + +   + +     P ++C++
Sbjct: 16  LDPALWLVCAGTTVEIPTLHSRVYYFPQGHFDQ-ASSAPRNLSPLLLS----KPAVLCRV 70

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTN-----YFCKTLTAS 122
            +V   AD  TDEV+A++ L P++                +   T       F K LTAS
Sbjct: 71  ESVQFLADPLTDEVFAKLILHPVADCFASGPSAVAPAAASASAQTGENNVVSFSKVLTAS 130

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           D +  GGFSVPR  A+ +FP L+F   PP Q L+  D+H   W+FRHI+RG P+RHLLTT
Sbjct: 131 DANNGGGFSVPRFCADSIFPPLNFQADPPVQNLLVTDVHGFVWEFRHIYRGTPRRHLLTT 190

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR------------------------ 218
           GWS FV+ K+LVAGD V+F+ N    L +GIRRA R                        
Sbjct: 191 GWSTFVNNKKLVAGDVVVFMKNSGGGLFVGIRRATRFSMGKGGDRGGMRIRVDEEEEEEE 250

Query: 219 --PPTVMPSSVLSSDSMHIGLLAAAAHAAAT-----NSCFTVFFNPRASPSEFVIPLTKY 271
                     V S D    G L+A   A A      N  F V + P+   SEFV+  T+ 
Sbjct: 251 EEEEEEEVREVFSRDGR--GKLSAKVVAEAAELAARNMPFEVVYYPKERWSEFVVK-TEA 307

Query: 272 VKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDES 330
           V        S G+R ++  ET++SS V    GT++ ++     +W  S WR ++V WDE 
Sbjct: 308 VNEAMKVAWSPGIRVKIAAETDDSSRVSWCQGTVSSVALHGNGQWRGSLWRMLQVTWDEP 367

Query: 331 TAGERQPRVSLWEIEPLTTFPMYPSLF-PLRLKRPWHPSTSSFNDNRD 377
              +    VS W++E ++T P   S F P++  +  H S    N  RD
Sbjct: 368 EGLQIAKWVSPWQVELVSTTPALHSAFPPIKRIKAAHDSGVFTNGERD 415


>gi|242077784|ref|XP_002448828.1| hypothetical protein SORBIDRAFT_06g033970 [Sorghum bicolor]
 gi|241940011|gb|EES13156.1| hypothetical protein SORBIDRAFT_06g033970 [Sorghum bicolor]
          Length = 518

 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 139/399 (34%), Positives = 204/399 (51%), Gaps = 66/399 (16%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           ++ ++W ACA PL  LPTVG  V YFP GH+EQ  A        H+P     P    C +
Sbjct: 14  VDRDVWLACAVPLSRLPTVGAEVYYFPHGHAEQCPA--------HLPAPIPAPHLFPCIV 65

Query: 68  HNVTMHADVETDEVYAQMTLQP------------LSPEEQKDTFVPIELGIPSKQP--TN 113
            N+T+ AD +T+EV+A+++L P            + P+    T        P  QP   +
Sbjct: 66  TNLTLGADDKTNEVFAKISLSPGPHHAPAAASSLVGPDPTTTTKESESDSPPHPQPQELS 125

Query: 114 YFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRG 173
           YF K LT SD +  GGFSVPR  A+ +FP+LDF   PP Q L+ RD     W+FRHI+RG
Sbjct: 126 YFTKELTQSDANNGGGFSVPRYCADHIFPTLDFDADPPVQNLVMRDTRGNPWQFRHIYRG 185

Query: 174 QPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDS- 232
            P+RHLLTTGWS FV+AK LVAGD V+F+      L++G+RR  R P V P +  ++++ 
Sbjct: 186 TPRRHLLTTGWSRFVNAKLLVAGDIVVFMRRTNGDLIVGLRRTPRYPLVFPGADANANAN 245

Query: 233 -------------MHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTR 279
                        +    +  AA  AA    FTV + PR +  EFV+P  + V+    TR
Sbjct: 246 QDQQPPPRNARARVPPQDVMEAARLAAEGRPFTVTYFPRQAAGEFVVPRDE-VERALATR 304

Query: 280 VSVGMRFRM-LFETEESSVRRYMGTITGISDLDPVRWSNSH--------WRSVKVGWDES 330
              G   RM + E E++  RR +             W++ H        WR++++ WD+S
Sbjct: 305 WEPGTEVRMQVMEAEDT--RRTV-------------WADGHVKALHQNIWRALEIDWDDS 349

Query: 331 TAGERQPR--VSLWEIEPLTTFPMYPSLFPLRLKRPWHP 367
           +    +    V+ W+++ L  +P  P+   +R+  P  P
Sbjct: 350 SPLSLKLSRFVNAWQVQ-LVAYPPLPNT--VRICDPIAP 385


>gi|357489255|ref|XP_003614915.1| Auxin response factor [Medicago truncatula]
 gi|355516250|gb|AES97873.1| Auxin response factor [Medicago truncatula]
          Length = 521

 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 131/384 (34%), Positives = 197/384 (51%), Gaps = 41/384 (10%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           + S++W  CAGP V++P V ++V YFP GH E    + N +  + I  Y    P   C +
Sbjct: 9   VKSKIWQTCAGPSVNVPKVRSKVYYFPHGHLEHACPSPNPQTITVIDGYG---PSFPCII 65

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTH 127
             V + AD  TDEV+A++ L P++  ++    V  E     K  +  F KTLT SD++  
Sbjct: 66  TAVDLLADPHTDEVFAKLLLSPVTEGQEFPEVVDEEDDGGDKFVS--FVKTLTKSDSNNG 123

Query: 128 GGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 187
           GGFSVPR  A+ +FP LD +   P+Q+L   D+HD  WKF H++RG+PKRHL TTGW+ F
Sbjct: 124 GGFSVPRICADLIFPKLDLNSPFPSQQLSVTDVHDRVWKFAHVYRGRPKRHLFTTGWTPF 183

Query: 188 VSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLS-----------------S 230
           V+ K+LVAGDS++F+ N    +++GIRR I+       +V +                 S
Sbjct: 184 VNTKKLVAGDSIVFMKNTAGDIVVGIRRNIKFAAAETKAVNNKKEEGKENGLEVKREGFS 243

Query: 231 DSMHIGLLA-----AAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMR 285
                G+L       A   A  N  F V + PRA+   FV+     V        + GMR
Sbjct: 244 RGGRRGMLTEKAVIEAVELAEKNLAFEVIYYPRANWCNFVVD-ANVVDDAMKIGWASGMR 302

Query: 286 FRMLFETEESSVRRYM-----GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVS 340
            ++  + +ESS  +       GTI+ +S +        +WR ++V WDE    + Q RV+
Sbjct: 303 VKLPLKIDESSNSKMTFFQPQGTISNVSSV-------PNWRMLQVNWDELEILQNQNRVN 355

Query: 341 LWEIEPLTTFPMYPSLFPLRLKRP 364
            W++E ++  P     F L  K+P
Sbjct: 356 PWQVELISHTPAVHLPF-LSTKKP 378


>gi|297839643|ref|XP_002887703.1| hypothetical protein ARALYDRAFT_895674 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297333544|gb|EFH63962.1| hypothetical protein ARALYDRAFT_895674 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 572

 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 132/396 (33%), Positives = 194/396 (48%), Gaps = 44/396 (11%)

Query: 4   DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQL 63
           +++ ++  +W ACAG  V +P + +RV YFPQGH E             I   P+    +
Sbjct: 12  NHRQVDPRIWRACAGASVQIPLLYSRVYYFPQGHVEHCCPL--------ISTLPSSTSPV 63

Query: 64  ICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDT----FVPIELGIPSKQPTNYFCKTL 119
            C + ++ + AD  TDEV+A + LQP++ E+   T    F   +  +        F K L
Sbjct: 64  PCLITSIQLLADPITDEVFAHLVLQPVTQEQFTPTNYSRFGRYDGDVDDNNKVTTFAKIL 123

Query: 120 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 179
           T SD +  GGFSVPR  A+ VFP LDF + PP Q+L   D+H   W FRHI+RG P+RHL
Sbjct: 124 TPSDANNGGGFSVPRFCADSVFPPLDFQIDPPVQKLYITDIHGAVWDFRHIYRGTPRRHL 183

Query: 180 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMP--------------- 224
           LTTGWS FV++K+L+AGDSV+F+    +++ +G+RR     +                  
Sbjct: 184 LTTGWSKFVNSKKLIAGDSVVFMKKAADEMFMGVRRTPISSSGGGSSYYGGDEYNGYYSQ 243

Query: 225 SSVLSSDSMHI---------GLLAAAAHAAATNSC-----FTVFFNPRASPSEFVIPLTK 270
           SSV   D             G L A A   A N       F V + P A  SEFV+   +
Sbjct: 244 SSVAKEDDGSAKKTFRRSGKGKLTAEAVTEAINRAAKGLPFEVAYYPTAGWSEFVV-RAE 302

Query: 271 YVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDES 330
            V++      + G R +M  ETE+SS   +   I   +  +   W  S W+ +++ WDE 
Sbjct: 303 DVESSMSVFWTPGTRVKMAMETEDSSRITWFQGIVSSTYQETGPWRGSPWKQLQITWDEP 362

Query: 331 TAGERQPRVSLWEIEPLTTFPMYPSLFP--LRLKRP 364
              +   RV+ W++E +       + FP   RLK P
Sbjct: 363 EILQNVKRVNPWQVEIVANATQLHATFPPAKRLKYP 398


>gi|293333131|ref|NP_001169598.1| uncharacterized protein LOC100383479 [Zea mays]
 gi|224030297|gb|ACN34224.1| unknown [Zea mays]
 gi|295844284|gb|ADG43139.1| auxin response factor 5 [Zea mays]
 gi|407232712|gb|AFT82698.1| ARF5 transcription factor, partial [Zea mays subsp. mays]
 gi|414586223|tpg|DAA36794.1| TPA: auxin response factor 5 [Zea mays]
          Length = 513

 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 136/384 (35%), Positives = 193/384 (50%), Gaps = 67/384 (17%)

Query: 5   NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLI 64
           +  ++ ++W ACA PL  LP VG  V YFP GH+EQ  A        H+P     P    
Sbjct: 15  DSIVDRDVWLACAVPLSRLPAVGAEVYYFPHGHAEQCPA--------HLPAPLPAPHLFP 66

Query: 65  CQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPT---NYFCKTLTA 121
           C +  V++ AD ET+EV+A+++L   SP   +           S  P    +YF K LT 
Sbjct: 67  CTVAGVSLGADDETNEVFAKISL---SPGPHRGPAAACRTDPTSDCPPQELSYFTKELTQ 123

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SD +  GGFSVPR  A+ +FP+LDF   PP Q+L  RD     W+FRHI+RG P+RHLLT
Sbjct: 124 SDANNGGGFSVPRYCADHIFPTLDFDANPPVQKLFMRDTRGNPWQFRHIYRGTPRRHLLT 183

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMP----------------- 224
           TGWS FV+AK LVAGD V+F+      L++G+RR  R P V P                 
Sbjct: 184 TGWSRFVNAKLLVAGDIVVFMRRHNGDLIVGLRRTPRYPLVFPRVGSGAGVDPDQPPPRN 243

Query: 225 --SSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSV 282
             + V   D +       AA  AA    F V + PR +  EF++P  + V+ V  TR   
Sbjct: 244 ARARVPPQDVIE------AARLAAEGRSFAVTYFPRQAAGEFIVPRDE-VEGVLATRWEP 296

Query: 283 GMRFRM-LFETEESSVRRYMGTITGISDLDPVRWSNSH--------WRSVKVGWDEST-- 331
           G + RM + E E++  RR +             W++ H        WR++++ WD+S+  
Sbjct: 297 GAQVRMQVMEAEDT--RRTV-------------WADGHVKSLHQNIWRALEIDWDDSSPL 341

Query: 332 AGERQPRVSLWEIEPLTTFPMYPS 355
           +      V+ W++E L T P  P+
Sbjct: 342 SPNLSRFVNAWQVE-LVTHPPLPN 364


>gi|356543474|ref|XP_003540185.1| PREDICTED: auxin response factor 18-like [Glycine max]
          Length = 700

 Score =  206 bits (524), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 105/218 (48%), Positives = 140/218 (64%), Gaps = 6/218 (2%)

Query: 1   MIGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLP 60
           M   +K L+ +LWHACAG +V +P V ++V YFPQGH+E   +     VD      P +P
Sbjct: 1   MKETDKSLDPQLWHACAGGMVQMPPVNSKVFYFPQGHAEHAQSN----VDFGAARIP-IP 55

Query: 61  PQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLT 120
           P ++C +  V   AD ETDEV+A++ + PL   E             S++P + F KTLT
Sbjct: 56  PLILCCVAAVKFLADPETDEVFARLRMVPLRNSELDYEDSDGNGAEGSEKPAS-FAKTLT 114

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
            SD +  GGFSVPR  AE +FP LD+S +PP Q +IA+D+H   WKFRHI+RG P+RHLL
Sbjct: 115 QSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIAKDVHGEVWKFRHIYRGTPRRHLL 174

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR 218
           TTGWS FV+ K+LVAGDS++F+  E   L +GIRRA R
Sbjct: 175 TTGWSSFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKR 212



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/133 (41%), Positives = 74/133 (55%), Gaps = 8/133 (6%)

Query: 241 AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRR 299
           A   AA+N  F V + PRA+  EF I  T  V+     + S GMRF+M FETE+SS +  
Sbjct: 275 AVTLAASNQPFEVVYYPRANTPEFCI-RTSAVRGAMRIQWSSGMRFKMPFETEDSSRISW 333

Query: 300 YMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL 359
           +MGTI  +  LDP+RW NS WR ++V WDE        RVS W +E ++  P+   L P 
Sbjct: 334 FMGTIASVQLLDPIRWPNSPWRLLQVTWDEPDLLHNVKRVSPWLVELVSNVPII-HLAPF 392

Query: 360 -----RLKRPWHP 367
                +L+ P HP
Sbjct: 393 SPPRKKLRFPQHP 405


>gi|359485334|ref|XP_002282830.2| PREDICTED: auxin response factor 6-like [Vitis vinifera]
          Length = 891

 Score =  205 bits (522), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 127/290 (43%), Positives = 174/290 (60%), Gaps = 34/290 (11%)

Query: 534 ISPMQNMLGSLP-EGSGNLLNFSGAGPSMLRQQF-PQQSLGSKYEPSQ----VRDFVHSM 587
           +S MQ++LGS   +G+ +LLN  G+ P +    F P+Q       PS     V   V  +
Sbjct: 604 VSTMQSLLGSFSQDGTSHLLNLHGSNPVISSSAFFPKQVAVEPPLPSGTTQCVLPQVEEL 663

Query: 588 SLPSS-----------YNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSF-TT 635
           + P S           + G++ +V       D QN+++FGV+IDSS L+L   +S+  + 
Sbjct: 664 ATPPSNASELSTLLPPFPGREYSV--YQGVADPQNNLLFGVNIDSSSLMLQNGMSNLRSI 721

Query: 636 SVDPGVSSMPLGDSGFHN------------SMYGCMQDSSELLHNVGQIDQLTP-TRTFV 682
             +    SMP     F N            +   C+ D S  L +   ++Q+ P TRTFV
Sbjct: 722 GSENDSVSMPFSTPNFANAPGTDFPLNSDMTTSSCI-DESGFLQSSENLEQVNPPTRTFV 780

Query: 683 KVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLG 742
           KV+K GS GRSLDI++FSSY+ELR ELG+MFG+EG+ EDPLRSGWQLVFVDRENDVLLLG
Sbjct: 781 KVHKLGSFGRSLDITKFSSYDELRGELGRMFGLEGRLEDPLRSGWQLVFVDRENDVLLLG 840

Query: 743 DDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANSRGNCGRD 792
           DDPW+ FV+NVWYIKILSP +VQ+MG++G+   +P    R ++ GN   D
Sbjct: 841 DDPWQEFVNNVWYIKILSPLEVQQMGKEGINVPNPIPSHRISNSGNSCDD 890


>gi|10086460|gb|AAG12520.1|AC015446_1 Similar to Auxin response factor 9 [Arabidopsis thaliana]
          Length = 479

 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 118/317 (37%), Positives = 168/317 (52%), Gaps = 59/317 (18%)

Query: 11  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 70
           +LW+ CAGPL  LP  G +V YFPQGH E +  +T  E+D HI    +LP +L C++  +
Sbjct: 21  KLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELD-HIRPIFDLPSKLRCRVVAI 79

Query: 71  TMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTHGGF 130
               D  TDEVYAQ++L P                                 DT+     
Sbjct: 80  DRKVDKNTDEVYAQISLMP---------------------------------DTT----- 101

Query: 131 SVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG--WSVFV 188
                         D S     Q L+A+DL+  EW F+H+FRG P+RH+ T+G  WSVF 
Sbjct: 102 --------------DMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSGGGWSVFA 147

Query: 189 SAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAATN 248
           + KRL+ GD  + +  E  +L  GIRRA      +PSSV+S++ M  G++A+  +A  T 
Sbjct: 148 TTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHGVIASVVNAFKTK 207

Query: 249 SCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGIS 308
             F V + P  S S+FVI   K+V A+ +  + VG RFRM FE ++ S +RY GTI G++
Sbjct: 208 CMFNVVYKP--SSSQFVISYDKFVDAMNNNYI-VGSRFRMQFEGKDFSEKRYDGTIIGVN 264

Query: 309 DLDPVRWSNSHWRSVKV 325
           D+ P  W +S WRS+K+
Sbjct: 265 DMSP-HWKDSEWRSLKI 280



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 58/100 (58%), Gaps = 4/100 (4%)

Query: 681 FVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVL 739
             KV+  G ++ R++D++    YN+L ++L ++F ++ +     R+ W++VF + E   +
Sbjct: 368 LTKVHMQGVAISRAVDLTAMHGYNQLIQKLEELFDLKDELR--TRNQWEIVFTNNEGAEM 425

Query: 740 LLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSS 779
           L+GDDPW  F +    I I S E+++KM  +  + F P S
Sbjct: 426 LVGDDPWPEFCNMAKRIFICSKEEIKKMKLKN-KFFQPES 464


>gi|359492813|ref|XP_002284328.2| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 17-like
           [Vitis vinifera]
          Length = 593

 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 127/372 (34%), Positives = 191/372 (51%), Gaps = 44/372 (11%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNL---PPQLI 64
           L+  +W ACAG  V +P V +RV YFPQGH EQ ++          P    L    P ++
Sbjct: 12  LDPSIWRACAGKSVHIPAVHSRVYYFPQGHVEQASSP---------PVLSPLVFSKPSVL 62

Query: 65  CQLHNVTMHADVETDEVYAQMTLQPL-------SPEEQKDTFVPIELGIPSKQPTNYFCK 117
           C++  V   AD +TDEV+A++ L+P+       + E ++      +     +     F K
Sbjct: 63  CRVVAVWFLADQDTDEVFAKIRLEPVGRSWESGTMERRRVGDGDDDKEDEGEDKVMSFVK 122

Query: 118 TLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKR 177
            LT+SD +  GGFSVPR  A+ +FP L+F   PP Q L+  DL   +W FRHI+RG P+R
Sbjct: 123 ILTSSDANNGGGFSVPRFCADYIFPPLNFQADPPVQHLLFTDLRGTKWDFRHIYRGTPRR 182

Query: 178 HLLTTGWSVFVSAKRLVAGDSVLFI-WNEKNQLLLGIRRAIR---------PPTVMPSSV 227
           HLLTTGWS FV+ K+LVAGDSV+F+  N  ++L +G+RR  R           + +  +V
Sbjct: 183 HLLTTGWSKFVNDKKLVAGDSVVFMKRNSNSELFIGVRRDARWNRNGERWSFRSALAGAV 242

Query: 228 LSSDSMHIGLLAAAAHAAATNSC-------------FTVFFNPRASPSEFVIPLTKYVKA 274
            + +   I   + ++                     F V + PR   S+FV+   + V+ 
Sbjct: 243 KAKEVGSIEGFSRSSSGRVRAEEVAVAAELAAQGMPFEVVYYPRVGSSDFVVK-AEVVEE 301

Query: 275 VFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAG 333
                 + GMR +M  ETE+SS    + GT++  + +D   W  S WR ++V WDE    
Sbjct: 302 ALSVFWTGGMRVKMAMETEDSSKTSLFQGTVSSATVMDNGPWRGSLWRMLQVTWDEPEVL 361

Query: 334 ERQPRVSLWEIE 345
           +   RVS W++E
Sbjct: 362 QNVMRVSPWQVE 373


>gi|259027684|gb|ACV91103.1| putative ETTIN protein [Petunia x hybrida]
          Length = 241

 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 108/227 (47%), Positives = 144/227 (63%), Gaps = 14/227 (6%)

Query: 53  IPNYP-----NLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPE-EQK--------DT 98
           IP YP     NL P + C++ +V + AD   DEVYAQ+ L P + + EQK        DT
Sbjct: 15  IPAYPPVVYNNLRPHVFCRVVDVNLQADTVNDEVYAQVPLVPDNQQIEQKWRDGDIDADT 74

Query: 99  FVPIELGIPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIAR 158
                 G       + FCKTLTASDTSTHGGFSVPRRAAE  FP LD+  Q P+QEL+A+
Sbjct: 75  EEEDLEGAGKSTTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAK 134

Query: 159 DLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR 218
           DLH + WKFRHI+RGQP+RHLLTTGWS FV+ K+LV+GD+VLF+     +L LG+RRA +
Sbjct: 135 DLHGMGWKFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRTGDGELRLGVRRAAQ 194

Query: 219 PPTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFV 265
             T        S  +++  +    +A ++ + F + +NPRAS S+F+
Sbjct: 195 AKTCSNYLAPYSQLLNVSGIVDVVNAISSRNAFNICYNPRASSSDFI 241


>gi|170677574|gb|ACB30859.1| ARF8, partial [Arabidopsis thaliana]
 gi|170677576|gb|ACB30860.1| ARF8, partial [Arabidopsis thaliana]
 gi|170677578|gb|ACB30861.1| ARF8, partial [Arabidopsis thaliana]
 gi|170677580|gb|ACB30862.1| ARF8, partial [Arabidopsis thaliana]
 gi|170677582|gb|ACB30863.1| ARF8, partial [Arabidopsis thaliana]
 gi|170677584|gb|ACB30864.1| ARF8, partial [Arabidopsis thaliana]
 gi|170677586|gb|ACB30865.1| ARF8, partial [Arabidopsis thaliana]
 gi|170677588|gb|ACB30866.1| ARF8, partial [Arabidopsis thaliana]
 gi|170677590|gb|ACB30867.1| ARF8, partial [Arabidopsis thaliana]
 gi|170677592|gb|ACB30868.1| ARF8, partial [Arabidopsis thaliana]
 gi|170677594|gb|ACB30869.1| ARF8, partial [Arabidopsis thaliana]
 gi|170677596|gb|ACB30870.1| ARF8, partial [Arabidopsis thaliana]
 gi|170677598|gb|ACB30871.1| ARF8, partial [Arabidopsis thaliana]
 gi|170677600|gb|ACB30872.1| ARF8, partial [Arabidopsis thaliana]
 gi|170677602|gb|ACB30873.1| ARF8, partial [Arabidopsis thaliana]
 gi|170677604|gb|ACB30874.1| ARF8, partial [Arabidopsis thaliana]
 gi|170677606|gb|ACB30875.1| ARF8, partial [Arabidopsis thaliana]
 gi|170677608|gb|ACB30876.1| ARF8, partial [Arabidopsis thaliana]
 gi|170677610|gb|ACB30877.1| ARF8, partial [Arabidopsis thaliana]
 gi|170677612|gb|ACB30878.1| ARF8, partial [Arabidopsis thaliana]
 gi|170677614|gb|ACB30879.1| ARF8, partial [Arabidopsis thaliana]
 gi|170677616|gb|ACB30880.1| ARF8, partial [Arabidopsis thaliana]
 gi|170677618|gb|ACB30881.1| ARF8, partial [Arabidopsis thaliana]
 gi|170677620|gb|ACB30882.1| ARF8, partial [Arabidopsis thaliana]
          Length = 130

 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 97/130 (74%), Positives = 110/130 (84%), Gaps = 1/130 (0%)

Query: 634 TTSVDPGVSSMPLGDSGFHNSMYGCMQDSS-ELLHNVGQIDQLTPTRTFVKVYKSGSVGR 692
           ++S D   S M L DSGF NS+Y CMQD++ ELLH  GQI+    T+ FVKVYKSGSVGR
Sbjct: 1   SSSGDAEASPMSLTDSGFQNSLYSCMQDTTHELLHGAGQINSSNQTKNFVKVYKSGSVGR 60

Query: 693 SLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSN 752
           SLDISRFSSY+ELREELG+MF IEG  EDPLRSGWQLVFVD+END+LLLGDDPWE+FV+N
Sbjct: 61  SLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFVDKENDILLLGDDPWESFVNN 120

Query: 753 VWYIKILSPE 762
           VWYIKILSPE
Sbjct: 121 VWYIKILSPE 130


>gi|379323228|gb|AFD01313.1| auxin response factor 17-1 [Brassica rapa subsp. pekinensis]
          Length = 546

 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 138/411 (33%), Positives = 201/411 (48%), Gaps = 49/411 (11%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           ++ ++W ACAG  V +P++ +RV YFPQGH E    +      S I ++    P + C +
Sbjct: 15  VDPQIWRACAGASVQIPSLYSRVYYFPQGHVEHSCPS------SLISSFSTAAP-VPCVV 67

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELG------------IPSKQPTNYF 115
             V + AD  TDEV+A + LQP+SPE     F P                  +K     F
Sbjct: 68  SAVELLADPITDEVFAHLALQPISPEH----FSPSNFSGFGSDDDDDNNSNSNKNKVVTF 123

Query: 116 CKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQP 175
            K LT SD +  GGFSVPR  A+ VFP LDF   PP Q+L   D+H V W FRHI+RG P
Sbjct: 124 AKILTPSDANNGGGFSVPRYCADSVFPPLDFHADPPVQKLFITDIHGVVWDFRHIYRGTP 183

Query: 176 KRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDS--- 232
           +RHLLTTGWS FV+ K+L+AGDSV+F+    +++ +G+RRA  P +              
Sbjct: 184 RRHLLTTGWSKFVNGKKLIAGDSVVFMRKSVDEMFIGVRRA--PISNHGDEYYGGGKKGF 241

Query: 233 --MHIGLLAAAAHAAATNSC-----FTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMR 285
             + +G L A A + A N       F V + P A  S+FV+   + V+       S G R
Sbjct: 242 RRIGMGKLTAEAVSEAVNKAVQGYPFEVVYYPTAGWSDFVV-RAEDVEVFMAGYWSPGTR 300

Query: 286 FRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEI 344
            +M  ETE+SS V  + G ++              W+ +++ WDE    +   RV+ W++
Sbjct: 301 VKMAMETEDSSRVTWFQGVVSSTFQ------ETGLWKQLQITWDEPEILQNLKRVNPWQV 354

Query: 345 EPLTTFPMYPSLFPLRLKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGL 395
           E +       +++P   +     S S F     E       L  G G+Q +
Sbjct: 355 EVVANSSHLLAIYPPAKRLKPSSSASGFLSGEGEM------LYSGRGQQAV 399


>gi|356542623|ref|XP_003539766.1| PREDICTED: auxin response factor 18-like [Glycine max]
          Length = 701

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 101/218 (46%), Positives = 142/218 (65%), Gaps = 16/218 (7%)

Query: 6   KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 65
           K L+ +LWHACAG +V +P + ++V YFPQGH+E           +H   +  LPP ++C
Sbjct: 6   KVLDPQLWHACAGGMVQMPQMNSKVFYFPQGHAEH----------AHTNIHLRLPPFILC 55

Query: 66  QLHNVTMHADVETDEVYAQMTLQPLSPEE---QKDTFVPIELGIPS--KQPTNYFCKTLT 120
            +  V   A+ ETDEV+A+++L PL   E     D     ++  PS  ++P + F KTLT
Sbjct: 56  NVEAVKFMANPETDEVFAKLSLLPLRNSELGADSDGAGGDDVAEPSCCEKPAS-FAKTLT 114

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
            SD +  GGFSVPR  AE +FP LD++ +PP Q ++A+D+H   W+FRHI+RG P+RHLL
Sbjct: 115 QSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVVAKDVHGETWRFRHIYRGTPRRHLL 174

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR 218
           TTGWS FV+ K+LVAGDSV+F+  E   L +GIRRA +
Sbjct: 175 TTGWSSFVNQKKLVAGDSVVFLRAENGDLCVGIRRAKK 212



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 53/134 (39%), Positives = 76/134 (56%), Gaps = 5/134 (3%)

Query: 238 LAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS- 296
           +  A   AA+N  F V + PRAS  EF +  +  V+A    +   GMRF+M FETE++S 
Sbjct: 275 VVEAVTLAASNKPFEVVYYPRASTPEFCVKASA-VRAAMRIQWCSGMRFKMAFETEDASR 333

Query: 297 VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPM--YP 354
           +  +MGTI  +  +DP+RW NS WR ++V WDE    +   RVS W +E ++  P+  + 
Sbjct: 334 ISWFMGTIASVQVVDPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNIPLINFT 393

Query: 355 SLFPLRLK-RPWHP 367
              P R K RP HP
Sbjct: 394 PFSPPRKKLRPQHP 407


>gi|18411720|ref|NP_565161.1| auxin response factor 17 [Arabidopsis thaliana]
 gi|46576532|sp|Q84WU6.1|ARFQ_ARATH RecName: Full=Auxin response factor 17
 gi|27754249|gb|AAO22578.1| auxin response factor ARF17 [Arabidopsis thaliana]
 gi|332197913|gb|AEE36034.1| auxin response factor 17 [Arabidopsis thaliana]
          Length = 585

 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 131/396 (33%), Positives = 193/396 (48%), Gaps = 44/396 (11%)

Query: 4   DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQL 63
           +++ ++  +W ACAG  V +P + +RV YFPQGH E      +    S  P        +
Sbjct: 12  NHREVDPTIWRACAGASVQIPVLHSRVYYFPQGHVEHCCPLLSTLPSSTSP--------V 63

Query: 64  ICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDT----FVPIELGIPSKQPTNYFCKTL 119
            C + ++ + AD  TDEV+A + LQP++ ++   T    F   +  +        F K L
Sbjct: 64  PCIITSIQLLADPVTDEVFAHLILQPMTQQQFTPTNYSRFGRFDGDVDDNNKVTTFAKIL 123

Query: 120 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 179
           T SD +  GGFSVPR  A+ VFP L+F + PP Q+L   D+H   W FRHI+RG P+RHL
Sbjct: 124 TPSDANNGGGFSVPRFCADSVFPLLNFQIDPPVQKLYVTDIHGAVWDFRHIYRGTPRRHL 183

Query: 180 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMP--------------- 224
           LTTGWS FV++K+L+AGDSV+F+    +++ +G+RR     +                  
Sbjct: 184 LTTGWSKFVNSKKLIAGDSVVFMRKSADEMFIGVRRTPISSSDGGSSYYGGDEYNGYYSQ 243

Query: 225 SSVLSSDSMHI---------GLLAAAAHAAATNSC-----FTVFFNPRASPSEFVIPLTK 270
           SSV   D             G L A A   A N       F V F P A  SEFV+   +
Sbjct: 244 SSVAKEDDGSPKKTFRRSGNGKLTAEAVTDAINRASQGLPFEVVFYPAAGWSEFVV-RAE 302

Query: 271 YVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDES 330
            V++      + G R +M  ETE+SS   +   I   +  +   W  S W+ +++ WDE 
Sbjct: 303 DVESSMSMYWTPGTRVKMAMETEDSSRITWFQGIVSSTYQETGPWRGSPWKQLQITWDEP 362

Query: 331 TAGERQPRVSLWEIEPLTTFPMYPSLFP--LRLKRP 364
              +   RV+ W++E         + FP   RLK P
Sbjct: 363 EILQNVKRVNPWQVEIAAHATQLHTPFPPAKRLKYP 398


>gi|15810291|gb|AAL07033.1| auxin response factor ARF17 [Arabidopsis thaliana]
          Length = 585

 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 131/396 (33%), Positives = 193/396 (48%), Gaps = 44/396 (11%)

Query: 4   DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQL 63
           +++ ++  +W ACAG  V +P + +RV YFPQGH E      +    S  P        +
Sbjct: 12  NHREVDPTIWRACAGASVQIPVLHSRVYYFPQGHVEHCCPLLSTLPSSTSP--------V 63

Query: 64  ICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDT----FVPIELGIPSKQPTNYFCKTL 119
            C + ++ + AD  TDEV+A + LQP++ ++   T    F   +  +        F K L
Sbjct: 64  PCIITSIQLLADPVTDEVFAHLILQPMTQQQFTPTNYSQFGRFDGDVDDNNKVTTFAKIL 123

Query: 120 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 179
           T SD +  GGFSVPR  A+ VFP L+F + PP Q+L   D+H   W FRHI+RG P+RHL
Sbjct: 124 TPSDANNGGGFSVPRFCADSVFPLLNFQIDPPVQKLYVTDIHGAVWDFRHIYRGTPRRHL 183

Query: 180 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMP--------------- 224
           LTTGWS FV++K+L+AGDSV+F+    +++ +G+RR     +                  
Sbjct: 184 LTTGWSKFVNSKKLIAGDSVVFMRKSADEMFIGVRRTPISSSDGGSSYYGGDEYNGYYSQ 243

Query: 225 SSVLSSDSMHI---------GLLAAAAHAAATNSC-----FTVFFNPRASPSEFVIPLTK 270
           SSV   D             G L A A   A N       F V F P A  SEFV+   +
Sbjct: 244 SSVAKEDDGSPKKTFRRSGNGKLTAEAVTDAINRASQGLPFEVVFYPAAGWSEFVV-RAE 302

Query: 271 YVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDES 330
            V++      + G R +M  ETE+SS   +   I   +  +   W  S W+ +++ WDE 
Sbjct: 303 DVESSMSMYWTPGTRVKMAMETEDSSRITWFQGIVSSTYQETGPWRGSPWKQLQITWDEP 362

Query: 331 TAGERQPRVSLWEIEPLTTFPMYPSLFP--LRLKRP 364
              +   RV+ W++E         + FP   RLK P
Sbjct: 363 EILQNVKRVNPWQVEIAAHATQLHTPFPPAKRLKYP 398


>gi|12323297|gb|AAG51629.1|AC012193_11 putative auxin response factor; 79762-82020 [Arabidopsis thaliana]
          Length = 596

 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 131/396 (33%), Positives = 193/396 (48%), Gaps = 44/396 (11%)

Query: 4   DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQL 63
           +++ ++  +W ACAG  V +P + +RV YFPQGH E      +    S  P        +
Sbjct: 12  NHREVDPTIWRACAGASVQIPVLHSRVYYFPQGHVEHCCPLLSTLPSSTSP--------V 63

Query: 64  ICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDT----FVPIELGIPSKQPTNYFCKTL 119
            C + ++ + AD  TDEV+A + LQP++ ++   T    F   +  +        F K L
Sbjct: 64  PCIITSIQLLADPVTDEVFAHLILQPMTQQQFTPTNYSRFGRFDGDVDDNNKVTTFAKIL 123

Query: 120 TASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 179
           T SD +  GGFSVPR  A+ VFP L+F + PP Q+L   D+H   W FRHI+RG P+RHL
Sbjct: 124 TPSDANNGGGFSVPRFCADSVFPLLNFQIDPPVQKLYVTDIHGAVWDFRHIYRGTPRRHL 183

Query: 180 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMP--------------- 224
           LTTGWS FV++K+L+AGDSV+F+    +++ +G+RR     +                  
Sbjct: 184 LTTGWSKFVNSKKLIAGDSVVFMRKSADEMFIGVRRTPISSSDGGSSYYGGDEYNGYYSQ 243

Query: 225 SSVLSSDSMHI---------GLLAAAAHAAATNSC-----FTVFFNPRASPSEFVIPLTK 270
           SSV   D             G L A A   A N       F V F P A  SEFV+   +
Sbjct: 244 SSVAKEDDGSPKKTFRRSGNGKLTAEAVTDAINRASQGLPFEVVFYPAAGWSEFVV-RAE 302

Query: 271 YVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDES 330
            V++      + G R +M  ETE+SS   +   I   +  +   W  S W+ +++ WDE 
Sbjct: 303 DVESSMSMYWTPGTRVKMAMETEDSSRITWFQGIVSSTYQETGPWRGSPWKQLQITWDEP 362

Query: 331 TAGERQPRVSLWEIEPLTTFPMYPSLFP--LRLKRP 364
              +   RV+ W++E         + FP   RLK P
Sbjct: 363 EILQNVKRVNPWQVEIAAHATQLHTPFPPAKRLKYP 398


>gi|116311996|emb|CAJ86354.1| H0814G11.21 [Oryza sativa Indica Group]
 gi|125550331|gb|EAY96153.1| hypothetical protein OsI_18032 [Oryza sativa Indica Group]
          Length = 525

 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 129/356 (36%), Positives = 188/356 (52%), Gaps = 28/356 (7%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPN-YPNLPPQLICQ 66
           ++  +W ACA PL  +P VGT+V YFP+GH+EQ  A         +P+  P+     +C 
Sbjct: 24  IDRLVWLACAAPLSRIPVVGTQVSYFPEGHAEQCPAP--------LPDPLPSAHRFFLCT 75

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 126
           +  V + AD  T E YA ++L PL  +         EL     Q   Y+ K LT SD + 
Sbjct: 76  ITAVDLSADTTTGEPYATISLLPLRHDAPAPAPAAAELAEAESQEFRYYAKQLTQSDANN 135

Query: 127 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 186
            GGFSVPR  A+ +FP+L+    PP Q L   DL    W+FRHI+RG P+RHLLTTGWS 
Sbjct: 136 GGGFSVPRLCADHIFPALNLDDDPPVQSLTMGDLQGDSWEFRHIYRGTPRRHLLTTGWSK 195

Query: 187 FVSAKRLVAGDSVLFIW----NEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           FV+AK+LVAGD+V+F+W      + +LL+G+RRA R      S+  +   +    +  A 
Sbjct: 196 FVNAKQLVAGDTVVFMWCGAPAPERKLLVGVRRAAR--YSGESACNARGRVQPQEVMEAV 253

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM-LFETEESSVRRYM 301
             AA  + F V + PR    EFV+P  +  K    T    GM+ R  + E E++    ++
Sbjct: 254 RLAAEQAAFRVTYYPRHGAGEFVVPRVEVDKG-LTTPWRCGMQVRAQVMEAEDTRRLAWL 312

Query: 302 -GTITGISDLDPVRWSNSHWRSVKVGWDESTAGE--RQPRVSLWEIEPLTTFPMYP 354
            GT+T +            WR+++V WD S A    +   V+ W+++P+  FP  P
Sbjct: 313 NGTLTNLR-------HQQIWRTLEVEWDASAASSSMKNRFVNPWQVQPV-DFPPLP 360


>gi|414884426|tpg|DAA60440.1| TPA: hypothetical protein ZEAMMB73_638933 [Zea mays]
          Length = 496

 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 103/123 (83%), Positives = 112/123 (91%)

Query: 204 NEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSE 263
           NEKNQLLLGIR A RP TVMPS VLSSDSMHI LLAA AHAAATNS FT+FFNPRASP+E
Sbjct: 22  NEKNQLLLGIRHASRPQTVMPSYVLSSDSMHIELLAAVAHAAATNSRFTIFFNPRASPTE 81

Query: 264 FVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSV 323
           FVIPL+KY+KA+FHTR+SVGMRFRMLFETEESSVRRYMGTIT +SD DPVRW +S+WRSV
Sbjct: 82  FVIPLSKYIKAIFHTRISVGMRFRMLFETEESSVRRYMGTITEVSDADPVRWPSSYWRSV 141

Query: 324 KVG 326
           KV 
Sbjct: 142 KVA 144



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 102/121 (84%), Positives = 111/121 (91%)

Query: 204 NEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSE 263
           NEKNQLLLGIR A RP TVMPS VLSSDSMHI LLAA AHAAATNS FT+FFNPRASP+E
Sbjct: 226 NEKNQLLLGIRHASRPQTVMPSYVLSSDSMHIELLAAVAHAAATNSRFTIFFNPRASPTE 285

Query: 264 FVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSV 323
           FVIPL+KY+KA+FHTR+SVGMRFRMLFETEESSVRRYMGTIT +SD DPVRW +S+WRSV
Sbjct: 286 FVIPLSKYIKAIFHTRISVGMRFRMLFETEESSVRRYMGTITEVSDADPVRWPSSYWRSV 345

Query: 324 K 324
           K
Sbjct: 346 K 346


>gi|357486991|ref|XP_003613783.1| Auxin response factor [Medicago truncatula]
 gi|355515118|gb|AES96741.1| Auxin response factor [Medicago truncatula]
          Length = 524

 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 122/380 (32%), Positives = 196/380 (51%), Gaps = 29/380 (7%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           ++ ++W  CAG  V +P + + V YFP GH E +  + N    SH+       P ++C +
Sbjct: 8   VDQKIWQCCAGSSVKIPKLYSHVYYFPLGHLEHICPSPNPNTLSHLDRSR---PFILCTV 64

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNY----FCKTLTASD 123
             V + AD+ TDEV+ ++ L P++    K    P  L +   +  +     + KTLT SD
Sbjct: 65  SAVDLLADLCTDEVFVKLLLTPVT---NKGVHEPHSLEVREDKDDDKKVVSYSKTLTPSD 121

Query: 124 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 183
            +  G FSVP   A+ +FP LD + + P QEL   D+H   WKFRH++RG P RHLLTT 
Sbjct: 122 ANNGGAFSVPVECAKLIFPPLDLNTEKPFQELSISDIHGKVWKFRHVYRGTPLRHLLTTD 181

Query: 184 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAH 243
           WS FV  KRLV GDS++F+ +    + +G+RR  +      ++ ++  S        A  
Sbjct: 182 WSEFVDKKRLVGGDSLIFMKDSDGNISVGVRRQTK---FGGAAKITEKS-----FTEAVE 233

Query: 244 AAATNSCFTVFFNPRASP-SEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVR--RY 300
            A  N  F V + P A     FV+   K V+   +   S+G+R  +  +  +SS R  ++
Sbjct: 234 LADKNLAFEVVYYPTAKGWCNFVVD-AKVVEDAMNISWSLGVRIELSSKNYDSSKRCSKF 292

Query: 301 MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT-TFPMYPSLFPL 359
            GTI+ +S        N  WR ++V WDE    +   RVS WE+E ++  F ++P   P 
Sbjct: 293 EGTISALSA------PNCPWRMLEVKWDEPKVSQVPERVSPWEVETISDIFALHPQFHPT 346

Query: 360 RLKRPWHPSTSSFNDNRDET 379
           +  +   P +++F+D + ++
Sbjct: 347 KKLKKSDPDSAAFSDKKGDS 366


>gi|379323230|gb|AFD01314.1| auxin response factor 17-2 [Brassica rapa subsp. pekinensis]
          Length = 546

 Score =  200 bits (509), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 131/396 (33%), Positives = 201/396 (50%), Gaps = 50/396 (12%)

Query: 5   NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLI 64
           ++ ++ ++W ACAG  V +P + +RV Y+PQGH E    +++    S I           
Sbjct: 11  HRVIDPKIWRACAGASVKIPALFSRVYYYPQGHVEHCCPSSSAVTASPI----------A 60

Query: 65  CQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVP---IELGIPSKQPTNYFCKTLTA 121
           C + ++ + AD  TDEV+A +TL P + ++Q   F P    E    S++    F K LTA
Sbjct: 61  CVVSSIDLLADPITDEVFAHLTLHPAAAQDQFQ-FPPQSRFEEEDESEKVVT-FAKVLTA 118

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SD +  GGFSVPR  A+ VFP LDF   PP Q+L   D+H   W FRHI+RG P+RHLLT
Sbjct: 119 SDANNGGGFSVPRYCADSVFPPLDFQADPPVQKLFITDVHGGVWDFRHIYRGTPRRHLLT 178

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSD---------- 231
           TGWS FV++K+L+ GDSV+F+    +++ +G+RRA        SS    +          
Sbjct: 179 TGWSKFVNSKKLICGDSVVFMRKSVHEMFIGVRRAPISNKSGGSSYYGDEYFPGGYYGVK 238

Query: 232 ---------SMHIGLLAAAAHAAATNSC-----FTVFFNPRASPSEFVIPLTKYVKAVFH 277
                     + +G L A A + A         F V + P A  SEFV+   + V+A  +
Sbjct: 239 KEDGGEKFRRVGMGKLTAEAVSEAIGKASRGLPFEVVYYPTAGWSEFVV-RAEDVEASTN 297

Query: 278 TRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQ 336
              + G R +M  ETE+SS +  + G ++              W+ +++ WDE    +  
Sbjct: 298 VYWTPGTRVKMAMETEDSSRITWFQGIVSAT--------FQETWKQLQITWDEPEILQNL 349

Query: 337 PRVSLWEIEPLT-TFPMYPSLFPLRLKRPWHPSTSS 371
            RV+ W++E +T +     + +P   KR  +P  SS
Sbjct: 350 KRVNPWQVEAVTASSTQLHATYPPPPKRSKYPHASS 385


>gi|326529683|dbj|BAK04788.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 529

 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 135/367 (36%), Positives = 184/367 (50%), Gaps = 26/367 (7%)

Query: 9   NSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLH 68
           + ++W ACA PL  +P VG++V YFP GHSEQ    T     +H     NL P   C + 
Sbjct: 24  DRDVWLACATPLSRVPVVGSQVYYFPHGHSEQC--PTPPRAPAH-----NLFP---CTVA 73

Query: 69  NVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTHG 128
            V + AD +TDE +A ++L P                 P      Y+ K LT SD +  G
Sbjct: 74  AVRLFADPKTDEPFATVSLVPGPHRAPAPDLPHASARRPEPTAFRYYAKQLTQSDANNGG 133

Query: 129 GFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFV 188
           GFSVPR  AE VFP LDF   PP Q L   D     W FRHI+RG P+RHLLTTGWS FV
Sbjct: 134 GFSVPRFCAELVFPPLDFEADPPVQRLRMTDPLGKHWDFRHIYRGTPRRHLLTTGWSKFV 193

Query: 189 SAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVM---PSSVLSSDSMHIGL--LAAAAH 243
           +AK LVAGD+V+F+     +LL GIRRA R P V    P     +    +    +  A  
Sbjct: 194 NAKLLVAGDAVVFMRRADGELLTGIRRAPRFPAVSQQGPERRPRNARARVPPQEVDDAVR 253

Query: 244 AAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGT 303
            AA  + FTV + PR    EFV+P  +  +A+       G++ RM F   E     ++  
Sbjct: 254 LAAEGAPFTVTYYPRQGAGEFVVPKQEVEEALVGA-WRPGVQVRMKFLDAEERRSEWING 312

Query: 304 ITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKR 363
           +  +  +DP     + WR +++ W ES AG     V+ W++E +   P+   L  L++  
Sbjct: 313 V--VKAVDP-----NIWRMLEINWAESVAGSLNRYVNAWQVEHVGHPPI---LKKLKISE 362

Query: 364 PWHPSTS 370
             HP  S
Sbjct: 363 VHHPLCS 369


>gi|357162852|ref|XP_003579544.1| PREDICTED: auxin response factor 13-like [Brachypodium distachyon]
          Length = 502

 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 130/354 (36%), Positives = 181/354 (51%), Gaps = 24/354 (6%)

Query: 7   CLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
            ++ ++W ACA PL  LP VG +V YFP GHSEQ        +      +P+L P   C 
Sbjct: 10  VVDRDVWLACATPLSRLPAVGAQVYYFPHGHSEQCPTALAAPLP-----HPHLFP---CT 61

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 126
           +  V + AD  TDE +A ++L P  P        P     P+     ++ K LT SD + 
Sbjct: 62  VAAVALSADPSTDEPFATISLVP-GPHRALGGGAPHHAVDPA---FAHYAKQLTQSDANN 117

Query: 127 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSV 186
            GGFSVPR  A+ VFP LDF   PP Q L  RDL    W+FRHI+RG P+RHLLTTGWS 
Sbjct: 118 GGGFSVPRFCADSVFPGLDFDADPPVQTLRMRDLLGKLWEFRHIYRGTPRRHLLTTGWSR 177

Query: 187 FVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVM-PSSVLSSDSMHIGL--LAAAAH 243
           FV+AK LVAGD+V+F+     +LL G+RR  R P    P+    +    +    +  AA 
Sbjct: 178 FVNAKLLVAGDAVVFMRRPDGELLAGVRRTPRYPVSQDPAEPPRNARARVPAQEVEDAAR 237

Query: 244 AAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGT 303
            AA  + FTV + PR    EFV+P  K V+    +    G + RM F   E     ++  
Sbjct: 238 RAAQGAPFTVTYYPRQGAGEFVVP-RKEVEDALISPWEPGTQVRMQFLHPEDRRSEWING 296

Query: 304 ITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPR-VSLWEIEPLTTFPMYPSL 356
           +    D       +S WR +++ WDES     + R V+ W+++ +   P+   L
Sbjct: 297 VVRAVD-------HSIWRMLEIDWDESAPPSLKNRHVNAWQVQLVGCPPLLKRL 343


>gi|301069369|ref|NP_001170537.2| auxin response factor 21 [Zea mays]
 gi|295844316|gb|ADG43155.1| auxin response factor 21 [Zea mays]
          Length = 698

 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 102/218 (46%), Positives = 139/218 (63%), Gaps = 13/218 (5%)

Query: 5   NKCL-NSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQL 63
            +CL + +LWHACAG +V +P V +RV YFPQGH+E      + ++ +       +P  +
Sbjct: 17  GRCLVDPQLWHACAGGMVQMPPVHSRVYYFPQGHAEHAQGHAHADLPAG-----RVPALV 71

Query: 64  ICQLHNVTMHADVETDEVYAQMTLQPLSPEE--QKDTFVPIELGIPSKQPTNYFCKTLTA 121
           +C++  V   AD +TDEV A++ L P+ P E    D   P   G    +P + F KTLT 
Sbjct: 72  LCRVDAVRFLADPDTDEVLARVRLAPVRPNEPDHADAAAP---GAREDKPAS-FAKTLTQ 127

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SD +  GGFSVPR  AE +FP LD+S  PP Q ++A+D+H V WKFRHI+RG P+RHLLT
Sbjct: 128 SDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLLT 187

Query: 182 TGWSVFVSAKRLVAGDSVLFI-WNEKNQLLLGIRRAIR 218
           TGWS FV+ KRLVAGDS++F+       L +GIRRA +
Sbjct: 188 TGWSAFVNQKRLVAGDSIVFMRTGGTGDLCVGIRRAKK 225



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/83 (42%), Positives = 50/83 (60%), Gaps = 1/83 (1%)

Query: 278 TRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQ 336
           T+   GMRF+M FETE+SS +  +MGT+  +   DP+RW NS WR ++V WDE    +  
Sbjct: 314 TQWCAGMRFKMAFETEDSSRISWFMGTVAAVQVADPIRWPNSPWRLLQVAWDEPDLLQNV 373

Query: 337 PRVSLWEIEPLTTFPMYPSLFPL 359
            RVS W +E +++ P    L P 
Sbjct: 374 KRVSPWLVELVSSTPAIHHLTPF 396


>gi|449466452|ref|XP_004150940.1| PREDICTED: auxin response factor 17-like [Cucumis sativus]
 gi|449524098|ref|XP_004169060.1| PREDICTED: auxin response factor 17-like [Cucumis sativus]
          Length = 550

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 130/373 (34%), Positives = 184/373 (49%), Gaps = 44/373 (11%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQV--AATTNKEVDSHIPNYPNLPPQLIC 65
           ++  LW A +G    + TVG+ V YF QGH EQ     T ++ V S+        P   C
Sbjct: 2   MDPNLWRAFSGNSAHIHTVGSEVYYFVQGHLEQATYVPTLSRSVLSN--------PITKC 53

Query: 66  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDT----FVPIELGIPSKQPTNYFCKTLTA 121
            +      AD  +DEV  ++ L P+ P +        F   + G   +     F K LT+
Sbjct: 54  IVSAADYTADPLSDEVCLKLNLNPIPPGQSVSQVVHPFSSCDDGNGQRNRIEKFAKVLTS 113

Query: 122 SDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181
           SD +  GGFSVPR  A+ +FP L++ ++PP Q L   D+H V W FRHI+RG P+RHLLT
Sbjct: 114 SDANNGGGFSVPRFCADSIFPPLNYQVEPPVQTLAITDVHGVVWNFRHIYRGTPRRHLLT 173

Query: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSD---------- 231
           TGWS FV+ K+L+AGD+V+F  +    + +GIRR+ +       S  +S           
Sbjct: 174 TGWSKFVNNKKLIAGDAVIFARDSSRDIFVGIRRSSKSSGGGDCSKWNSQVGGGGRCNVE 233

Query: 232 -------------SMHIG-----LLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVK 273
                          +IG      +A AA  AA    F V + PR   SEFVIP  K V 
Sbjct: 234 EKRSGDRSTDVFTRTNIGKVPAETVATAAELAAEFKPFEVVYYPRIGTSEFVIPAEK-VN 292

Query: 274 AVFHTRVSVGMRFRMLFETEES-SVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTA 332
              + +   G+R +M  ETE+S   + Y GT+T  S      W  S WR ++V W+E+ A
Sbjct: 293 NSLNYQWYPGIRVKMPVETEDSLKTQWYQGTVTSASVPIQGPWKGSPWRMLEVTWEETDA 352

Query: 333 GERQPRVSLWEIE 345
            +    VS WE+E
Sbjct: 353 LQSAKFVSPWEVE 365


>gi|75233030|sp|Q7XSS9.2|ARFM_ORYSJ RecName: Full=Auxin response factor 13
 gi|38345524|emb|CAE01808.2| OSJNBa0039K24.27 [Oryza sativa Japonica Group]
 gi|215766448|dbj|BAG98756.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 529

 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 128/360 (35%), Positives = 187/360 (51%), Gaps = 32/360 (8%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPN-YPNLPPQLICQ 66
           ++  +W ACA PL  +P VGT+V YFP+GH+EQ  A         +P+  P+     +C 
Sbjct: 24  IDRLVWLACAAPLSRIPVVGTQVSYFPEGHAEQCPAP--------LPDPLPSAHRFFLCT 75

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPS----KQPTNYFCKTLTAS 122
           +  V + AD  T E YA ++L PL  +       P            Q   Y+ K LT S
Sbjct: 76  ITAVDLSADTTTGEPYATISLLPLRHDAPAPAPAPAPAAAELAEAESQEFRYYAKQLTQS 135

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           D +  GGFSVPR  A+ +FP+L+    PP Q L   DL    W+FRHI+RG P+RHLLTT
Sbjct: 136 DANNGGGFSVPRLCADHIFPALNLDDDPPVQSLTMGDLQGDSWEFRHIYRGTPRRHLLTT 195

Query: 183 GWSVFVSAKRLVAGDSVLFIW----NEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLL 238
           GWS FV+AK+LVAGD+V+F+W      + +LL+G+RRA R      S+  +   +    +
Sbjct: 196 GWSKFVNAKQLVAGDTVVFMWCGAPAPERKLLVGVRRAAR--YSGESACNARGRVQPQEV 253

Query: 239 AAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM-LFETEESSV 297
             A   AA  + F V + PR    EFV+P  +  K    T    GM+ R  + E E++  
Sbjct: 254 MEAVRLAAEQAAFRVTYYPRHGAGEFVVPRVEVDKG-LTTPWRCGMQVRAQVMEAEDTRR 312

Query: 298 RRYM-GTITGISDLDPVRWSNSHWRSVKVGWDESTAGE--RQPRVSLWEIEPLTTFPMYP 354
             ++ GT+T +            WR+++V WD S A    +   V+ W+++P+  FP  P
Sbjct: 313 LAWLNGTLTNLR-------HQQIWRTLEVEWDASAASSSMKNRFVNPWQVQPV-DFPPLP 364


>gi|357492607|ref|XP_003616592.1| Auxin response factor [Medicago truncatula]
 gi|355517927|gb|AES99550.1| Auxin response factor [Medicago truncatula]
          Length = 460

 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 128/376 (34%), Positives = 195/376 (51%), Gaps = 19/376 (5%)

Query: 6   KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 65
           K ++ E+W   AGP   +P + ++V YFP GH E    + N E  S I +Y    P + C
Sbjct: 7   KRVDREIWQCLAGPSFKIPKLNSQVFYFPLGHLEHACPSPNTEALSLINSYR---PIIPC 63

Query: 66  QLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVP-IELGIPSKQPTNYFCKTLTASDT 124
            + +V + AD++TDEV+A++ L P++ +   +   P +           +  KTLT SD 
Sbjct: 64  VVSDVDLLADLQTDEVFAKLILTPITNDSVHEPQEPEVRENEHGGDRLVFSGKTLTQSDA 123

Query: 125 STHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 184
           +  G FSVP   A+ +FP LD +   P+Q L  +D+H+  W FRH +RG PKRHL+TT W
Sbjct: 124 NNGGAFSVPSECAKLIFPPLDLTSPMPSQVLPIKDIHNFVWNFRHTYRGSPKRHLITTKW 183

Query: 185 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHA 244
           S FV  K+++ GDS++ +   K++    I   IR   +  ++ ++  S     +  AA  
Sbjct: 184 SKFVDTKKIIGGDSLVLMKISKDKDKDKIFIGIRRHKLSAAAKITEKS-----VMEAAEL 238

Query: 245 AATNSCFTVFFNPRASP-SEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRR--YM 301
           A  N  F V + P AS    FV+   + VK         GMR +   +T+ESS R   + 
Sbjct: 239 ADKNMTFEVIYYPTASHWCNFVVD-AEAVKKAMQINWQSGMRVKHCLKTDESSKRSSIFQ 297

Query: 302 GTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRL 361
           GT++ +SD      S+  WR ++V WDES   +   +VS W+IE ++  P  P  FP + 
Sbjct: 298 GTVSALSDP-----SHHPWRMLQVNWDESEVSQNPSQVSPWQIELISHTPALPLQFPPQK 352

Query: 362 K-RPWHPSTSSFNDNR 376
           K R  H S  S N  R
Sbjct: 353 KLRIAHVSALSTNIER 368


>gi|304308101|gb|ADL70363.1| auxin response factor 8 [Arabidopsis thaliana]
          Length = 304

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 141/326 (43%), Positives = 185/326 (56%), Gaps = 58/326 (17%)

Query: 394 GLTTLNFQSLGMFPWMQQRVEPSFLGNDHNQQYQAMLAAGMQS---GDPVRQQFMQLQQP 450
           GL  LN+ S+G+FPWMQQR++ S +G D+NQQYQAMLAAG+Q+   GDP+RQQF+QLQ+P
Sbjct: 1   GLLPLNYPSVGLFPWMQQRLDLSQMGTDNNQQYQAMLAAGLQNIGGGDPLRQQFVQLQEP 60

Query: 451 -FQYLQQSGSQNP-LQLKQQ------QHLLQQLNSQAEDRAQQQQQPQQHM--------- 493
             QYLQQS S N  L L+QQ      +HL+      A+ +   +  PQQ+M         
Sbjct: 61  HHQYLQQSASHNSDLMLQQQQQQQATRHLM-----HAQTQIMSENLPQQNMRQEVSNQPA 115

Query: 494 -------------YHDALQIRTDELLQ-RQQSNLPSPSFSKANFMDSSTEISVSISPMQN 539
                        Y +A +++   L Q +QQS +PSPSF K++F DSS + + + SP   
Sbjct: 116 RQQQQLQQPDQNAYLNAFKMQNGHLQQWQQQSEMPSPSFMKSDFTDSSNKFATTASPA-- 173

Query: 540 MLGSLPEGSGNLLNFSGAGPSMLRQQFPQQSLGSKYEPSQVRDFVHSMSLPSSYNGKDAA 599
                  G GNLLNFS  G S+L    P+Q     + P     F   +SLP +Y GK  A
Sbjct: 174 ------SGDGNLLNFSITGQSVL----PEQLTTEGWSPKASNTFSEPLSLPQAYPGKSLA 223

Query: 600 VGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFTTSV-DPGVSSMPLGDSGFHNSMYGC 658
           +   N     QN  +FGV  D SGL LP+TV  F +S  D   S M L DSGF NS+Y C
Sbjct: 224 LEPGN----PQNPSLFGVDPD-SGLFLPSTVPRFASSSGDAEASPMSLTDSGFQNSLYSC 278

Query: 659 MQDSS-ELLHNVGQIDQLTPTRTFVK 683
           MQD++ ELLH  GQI+    T+ FVK
Sbjct: 279 MQDTTHELLHGAGQINSSNQTKNFVK 304


>gi|304308091|gb|ADL70358.1| auxin response factor 8 [Arabidopsis thaliana]
          Length = 304

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 141/326 (43%), Positives = 185/326 (56%), Gaps = 58/326 (17%)

Query: 394 GLTTLNFQSLGMFPWMQQRVEPSFLGNDHNQQYQAMLAAGMQS---GDPVRQQFMQLQQP 450
           GL  LN+ S+G+FPWMQQR++ S +G D+NQQYQAMLAAG+Q+   GDP+RQQF+QLQ+P
Sbjct: 1   GLLPLNYPSVGLFPWMQQRLDLSQMGTDNNQQYQAMLAAGLQNIGGGDPLRQQFVQLQEP 60

Query: 451 -FQYLQQSGSQNP-LQLKQQ------QHLLQQLNSQAEDRAQQQQQPQQHM--------- 493
             QYLQQS S N  L L+QQ      +HL+      A+ +   +  PQQ+M         
Sbjct: 61  HHQYLQQSASHNSDLMLQQQQQQQATRHLM-----HAQTQIMSENLPQQNMRQEVSNQPA 115

Query: 494 -------------YHDALQIRTDELLQ-RQQSNLPSPSFSKANFMDSSTEISVSISPMQN 539
                        Y +A +++   L Q +QQS +PSPSF K++F DSS + + + SP   
Sbjct: 116 GQQQQLQQPDQNAYLNAFKMQNGHLQQWQQQSEMPSPSFMKSDFTDSSNKFATTASPA-- 173

Query: 540 MLGSLPEGSGNLLNFSGAGPSMLRQQFPQQSLGSKYEPSQVRDFVHSMSLPSSYNGKDAA 599
                  G GNLLNFS  G S+L    P+Q     + P     F   +SLP +Y GK  A
Sbjct: 174 ------SGDGNLLNFSITGQSVL----PEQLTTEGWSPKASNTFSEPLSLPQAYPGKSLA 223

Query: 600 VGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFTTSV-DPGVSSMPLGDSGFHNSMYGC 658
           +   N     QN  +FGV  D SGL LP+TV  F +S  D   S M L DSGF NS+Y C
Sbjct: 224 LEPGN----PQNPSLFGVDPD-SGLFLPSTVPRFASSSGDAEASPMSLTDSGFQNSLYSC 278

Query: 659 MQDSS-ELLHNVGQIDQLTPTRTFVK 683
           MQD++ ELLH  GQI+    T+ FVK
Sbjct: 279 MQDTTHELLHGAGQINSSNQTKNFVK 304


>gi|298111082|gb|ADB96361.2| auxin response factor 8 [Arabidopsis thaliana]
 gi|304308083|gb|ADL70354.1| auxin response factor 8 [Arabidopsis thaliana]
 gi|304308085|gb|ADL70355.1| auxin response factor 8 [Arabidopsis thaliana]
 gi|304308089|gb|ADL70357.1| auxin response factor 8 [Arabidopsis thaliana]
 gi|304308097|gb|ADL70361.1| auxin response factor 8 [Arabidopsis thaliana]
 gi|304308099|gb|ADL70362.1| auxin response factor 8 [Arabidopsis thaliana]
          Length = 304

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 141/326 (43%), Positives = 185/326 (56%), Gaps = 58/326 (17%)

Query: 394 GLTTLNFQSLGMFPWMQQRVEPSFLGNDHNQQYQAMLAAGMQS---GDPVRQQFMQLQQP 450
           GL  LN+ S+G+FPWMQQR++ S +G D+NQQYQAMLAAG+Q+   GDP+RQQF+QLQ+P
Sbjct: 1   GLLPLNYPSVGLFPWMQQRLDLSQMGTDNNQQYQAMLAAGLQNIGGGDPLRQQFVQLQEP 60

Query: 451 -FQYLQQSGSQNP-LQLKQQ------QHLLQQLNSQAEDRAQQQQQPQQHM--------- 493
             QYLQQS S N  L L+QQ      +HL+      A+ +   +  PQQ+M         
Sbjct: 61  HHQYLQQSASHNSDLMLQQQQQQQASRHLM-----HAQTQIMSENLPQQNMRQEVSNQPA 115

Query: 494 -------------YHDALQIRTDELLQ-RQQSNLPSPSFSKANFMDSSTEISVSISPMQN 539
                        Y +A +++   L Q +QQS +PSPSF K++F DSS + + + SP   
Sbjct: 116 GQQQQLQQPDQNAYLNAFKMQNGHLQQWQQQSEMPSPSFMKSDFTDSSNKFATTASPA-- 173

Query: 540 MLGSLPEGSGNLLNFSGAGPSMLRQQFPQQSLGSKYEPSQVRDFVHSMSLPSSYNGKDAA 599
                  G GNLLNFS  G S+L    P+Q     + P     F   +SLP +Y GK  A
Sbjct: 174 ------SGDGNLLNFSITGQSVL----PEQLTTEGWSPKASNTFSEPLSLPQAYPGKSLA 223

Query: 600 VGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFTTSV-DPGVSSMPLGDSGFHNSMYGC 658
           +   N     QN  +FGV  D SGL LP+TV  F +S  D   S M L DSGF NS+Y C
Sbjct: 224 LEPGN----PQNPSLFGVDPD-SGLFLPSTVPRFASSSGDAEASPMSLTDSGFQNSLYSC 278

Query: 659 MQDSS-ELLHNVGQIDQLTPTRTFVK 683
           MQD++ ELLH  GQI+    T+ FVK
Sbjct: 279 MQDTTHELLHGAGQINSSNQTKNFVK 304


>gi|304308103|gb|ADL70364.1| auxin response factor 8 [Arabidopsis thaliana]
          Length = 304

 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 140/326 (42%), Positives = 185/326 (56%), Gaps = 58/326 (17%)

Query: 394 GLTTLNFQSLGMFPWMQQRVEPSFLGNDHNQQYQAMLAAGMQS---GDPVRQQFMQLQQP 450
           GL  LN+ S+G+FPWMQQR++ S +G D+NQQYQAMLAAG+Q+   GDP+RQQF+QLQ+P
Sbjct: 1   GLLPLNYPSVGLFPWMQQRLDLSQMGTDNNQQYQAMLAAGLQNIGGGDPLRQQFVQLQEP 60

Query: 451 -FQYLQQSGSQNP-LQLKQQ------QHLLQQLNSQAEDRAQQQQQPQQHM--------- 493
             QYLQQS S N  L L+QQ      +HL+      A+ +   +  PQQ+M         
Sbjct: 61  HHQYLQQSASHNSDLMLQQQQQQQASRHLM-----HAQTQIMSENLPQQNMRQEVSNQPA 115

Query: 494 -------------YHDALQIRTDELLQ-RQQSNLPSPSFSKANFMDSSTEISVSISPMQN 539
                        Y +A +++   L Q +QQS +PSPSF K++F DS+ + + + SP   
Sbjct: 116 GQQQQLQQPDQNAYLNAFKMQNGHLQQWQQQSEMPSPSFMKSDFTDSNNKFATTASPA-- 173

Query: 540 MLGSLPEGSGNLLNFSGAGPSMLRQQFPQQSLGSKYEPSQVRDFVHSMSLPSSYNGKDAA 599
                  G GNLLNFS  G S+L    P+Q     + P     F   +SLP +Y GK  A
Sbjct: 174 ------SGDGNLLNFSITGQSVL----PEQLTTEGWSPKASNTFSEPLSLPQAYPGKSLA 223

Query: 600 VGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFTTSV-DPGVSSMPLGDSGFHNSMYGC 658
           +   N     QN  +FGV  D SGL LP+TV  F +S  D   S M L DSGF NS+Y C
Sbjct: 224 LEPGN----PQNPSLFGVDPD-SGLFLPSTVPRFASSSGDAEASPMSLTDSGFQNSLYSC 278

Query: 659 MQDSS-ELLHNVGQIDQLTPTRTFVK 683
           MQD++ ELLH  GQI+    T+ FVK
Sbjct: 279 MQDTTHELLHGAGQINSSNQTKNFVK 304


>gi|359475629|ref|XP_003631719.1| PREDICTED: auxin response factor 6-like [Vitis vinifera]
          Length = 119

 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 88/98 (89%), Positives = 93/98 (94%)

Query: 85  MTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSL 144
           MTLQPLSP+EQKD ++P ELG+PSKQP+NYFCKTL ASDTSTHGGFSVPRRAAEKVFPSL
Sbjct: 1   MTLQPLSPQEQKDAYLPAELGVPSKQPSNYFCKTLIASDTSTHGGFSVPRRAAEKVFPSL 60

Query: 145 DFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           DFS QPPAQELIARDLHD EWKFRHIFRGQPKRHLLTT
Sbjct: 61  DFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTT 98


>gi|298111078|gb|ADB96359.2| auxin response factor 8 [Arabidopsis thaliana]
          Length = 303

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 140/325 (43%), Positives = 184/325 (56%), Gaps = 58/325 (17%)

Query: 395 LTTLNFQSLGMFPWMQQRVEPSFLGNDHNQQYQAMLAAGMQS---GDPVRQQFMQLQQP- 450
           L  LN+ S+G+FPWMQQR++ S +G D+NQQYQAMLAAG+Q+   GDP+RQQF+QLQ+P 
Sbjct: 1   LLPLNYPSVGLFPWMQQRLDLSQMGTDNNQQYQAMLAAGLQNIGGGDPLRQQFVQLQEPH 60

Query: 451 FQYLQQSGSQNP-LQLKQQ------QHLLQQLNSQAEDRAQQQQQPQQHM---------- 493
            QYLQQS S N  L L+QQ      +HL+      A+ +   +  PQQ+M          
Sbjct: 61  HQYLQQSASHNSDLMLQQQQQQQASRHLM-----HAQTQIMSENLPQQNMRQEVSNQPAG 115

Query: 494 ------------YHDALQIRTDELLQ-RQQSNLPSPSFSKANFMDSSTEISVSISPMQNM 540
                       Y +A +++   L Q +QQS +PSPSF K++F DSS + + + SP    
Sbjct: 116 QQQQLQQSDQNAYLNAFKMQNGHLQQWQQQSEMPSPSFMKSDFTDSSNKFATTASPA--- 172

Query: 541 LGSLPEGSGNLLNFSGAGPSMLRQQFPQQSLGSKYEPSQVRDFVHSMSLPSSYNGKDAAV 600
                 G GNLLNFS  G S+L    P+Q     + P     F   +SLP +Y GK  A+
Sbjct: 173 -----SGDGNLLNFSITGQSVL----PEQLTTEGWSPKASNTFSEPLSLPQAYPGKSLAL 223

Query: 601 GTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFTTSV-DPGVSSMPLGDSGFHNSMYGCM 659
              N     QN  +FGV  D SGL LP+TV  F +S  D   S M L DSGF NS+Y CM
Sbjct: 224 EPGN----PQNPSLFGVDPD-SGLFLPSTVPRFASSSGDAEASPMSLTDSGFQNSLYSCM 278

Query: 660 QDSS-ELLHNVGQIDQLTPTRTFVK 683
           QD++ ELLH  GQI+    T+ FVK
Sbjct: 279 QDTTHELLHGAGQINSSNQTKNFVK 303


>gi|298111076|gb|ADB96358.2| auxin response factor 8 [Arabidopsis thaliana]
 gi|304308079|gb|ADL70352.1| auxin response factor 8 [Arabidopsis thaliana]
 gi|304308081|gb|ADL70353.1| auxin response factor 8 [Arabidopsis thaliana]
 gi|304308087|gb|ADL70356.1| auxin response factor 8 [Arabidopsis thaliana]
 gi|304308093|gb|ADL70359.1| auxin response factor 8 [Arabidopsis thaliana]
 gi|304308095|gb|ADL70360.1| auxin response factor 8 [Arabidopsis thaliana]
          Length = 303

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 140/325 (43%), Positives = 184/325 (56%), Gaps = 58/325 (17%)

Query: 395 LTTLNFQSLGMFPWMQQRVEPSFLGNDHNQQYQAMLAAGMQS---GDPVRQQFMQLQQP- 450
           L  LN+ S+G+FPWMQQR++ S +G D+NQQYQAMLAAG+Q+   GDP+RQQF+QLQ+P 
Sbjct: 1   LLPLNYPSVGLFPWMQQRLDLSQMGTDNNQQYQAMLAAGLQNIGGGDPLRQQFVQLQEPH 60

Query: 451 FQYLQQSGSQNP-LQLKQQ------QHLLQQLNSQAEDRAQQQQQPQQHM---------- 493
            QYLQQS S N  L L+QQ      +HL+      A+ +   +  PQQ+M          
Sbjct: 61  HQYLQQSASHNSDLMLQQQQQQQASRHLM-----HAQTQIMSENLPQQNMRQEVSNQPAG 115

Query: 494 ------------YHDALQIRTDELLQ-RQQSNLPSPSFSKANFMDSSTEISVSISPMQNM 540
                       Y +A +++   L Q +QQS +PSPSF K++F DSS + + + SP    
Sbjct: 116 QQQQLQQPDQNAYLNAFKMQNGHLQQWQQQSEMPSPSFMKSDFTDSSNKFATTASPA--- 172

Query: 541 LGSLPEGSGNLLNFSGAGPSMLRQQFPQQSLGSKYEPSQVRDFVHSMSLPSSYNGKDAAV 600
                 G GNLLNFS  G S+L    P+Q     + P     F   +SLP +Y GK  A+
Sbjct: 173 -----SGDGNLLNFSITGQSVL----PEQLTTEGWSPKASNTFSEPLSLPQAYPGKSLAL 223

Query: 601 GTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFTTSV-DPGVSSMPLGDSGFHNSMYGCM 659
              N     QN  +FGV  D SGL LP+TV  F +S  D   S M L DSGF NS+Y CM
Sbjct: 224 EPGN----PQNPSLFGVDPD-SGLFLPSTVPRFASSSGDAEASPMSLTDSGFQNSLYSCM 278

Query: 660 QDSS-ELLHNVGQIDQLTPTRTFVK 683
           QD++ ELLH  GQI+    T+ FVK
Sbjct: 279 QDTTHELLHGAGQINSSNQTKNFVK 303


>gi|147843289|emb|CAN80533.1| hypothetical protein VITISV_030510 [Vitis vinifera]
          Length = 624

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 129/400 (32%), Positives = 192/400 (48%), Gaps = 71/400 (17%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAA--TTNKEVDSHIPNYPNLPPQLIC 65
           L+  +W ACAG  V +P V +RV YFPQGH EQ ++    +  V S         P ++C
Sbjct: 12  LDPSIWRACAGKSVHIPAVHSRVYYFPQGHVEQASSPPVLSPLVFSK--------PSVLC 63

Query: 66  QLHNVTMHADVETDEVYAQMTLQPL-------SPEEQKDTFVPIELGIPSKQPTNYFCKT 118
           ++  V   AD +TDEV+A++ L+P+       + E ++      +     +     F K 
Sbjct: 64  RVVAVWFLADQDTDEVFAKIRLEPVGRSWESGTMERRRVGDGDDDKEDEGEDKVMSFVKI 123

Query: 119 LTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRH 178
           LT+SD +  GGFSVPR  A+ +FP L+F   PP Q L+  DL   +W FRHI+RG P+RH
Sbjct: 124 LTSSDANNGGGFSVPRFCADYIFPPLNFQADPPVQHLLFTDLRGTKWDFRHIYRGTPRRH 183

Query: 179 LLTTGWSVFVSAKRLVAGDSVLFI-WNEKNQLLLGIRRAIR---------PPTVMPSSVL 228
           LLTTGWS FV+ K+LVAGDSV+F+  N  ++L +G+RR  R           + +  +V 
Sbjct: 184 LLTTGWSKFVNDKKLVAGDSVVFMKRNSNSELFIGVRRDARWNRNGERWSFRSALAGAVK 243

Query: 229 SSDSMHIGLLAAAAHAAATNSC-------------FTVFFNPRASPSEFVIPLTKYVKAV 275
           + +   I   + ++                     F V + PR   S+FV+   + V+  
Sbjct: 244 AKEVGSIEGFSRSSSGRVRAEEVAVAAELAAQGMPFEVVYYPRVGSSDFVVK-AEVVEEA 302

Query: 276 FHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWR------------- 321
                + GMR +M  ETE+SS    + GT++  + +D   W  S WR             
Sbjct: 303 LSVFWTGGMRVKMAMETEDSSKTSLFQGTVSSATVMDNGPWRGSLWRMLQTWSYLQDTKM 362

Query: 322 ----------------SVKVGWDESTAGERQPRVSLWEIE 345
                            VKV WDE    +   RVS W++E
Sbjct: 363 RSLIVTFFSGLLVLDLYVKVTWDEPEVLQNVMRVSPWQVE 402


>gi|293332071|ref|NP_001169029.1| uncharacterized protein LOC100382863 [Zea mays]
 gi|223974533|gb|ACN31454.1| unknown [Zea mays]
          Length = 122

 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 92/117 (78%), Positives = 103/117 (88%), Gaps = 2/117 (1%)

Query: 655 MYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFG 714
           MYGC+ DSS LL N G+ D    TRTFVKVYKSGSVGRSLDI+RFS+Y ELREELGQMFG
Sbjct: 1   MYGCLDDSSGLLQNTGEND--PTTRTFVKVYKSGSVGRSLDITRFSNYAELREELGQMFG 58

Query: 715 IEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 771
           I+G+ +DP RSGWQLVFVDRENDVLLLGDDPWE+FV++VWYIKILSPEDV KMG+ G
Sbjct: 59  IKGQLDDPDRSGWQLVFVDRENDVLLLGDDPWESFVNSVWYIKILSPEDVHKMGKPG 115


>gi|356550817|ref|XP_003543780.1| PREDICTED: auxin response factor 17-like [Glycine max]
          Length = 551

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 128/355 (36%), Positives = 185/355 (52%), Gaps = 29/355 (8%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           ++ ++W ACAG  V +P + +RV YFPQGH E   A+ +  +   I + P +P    C +
Sbjct: 9   VDPKIWRACAGAAVQIPKLHSRVYYFPQGHMEH--ASPSHYLSPLIRSLPFVP----CHV 62

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQ-------KDTFVPIELGIPSKQPTNYFCKTLT 120
            ++   AD  +DEV+A+  L PLS  +Q       K+     +           F K LT
Sbjct: 63  SSLDFLADPFSDEVFAKFLLTPLSQSQQQPFQNDTKEARNDDDDEDRENNGVVSFAKILT 122

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
            SD +  GGFSVPR  A+  FP LDF   PP Q L   D+H VEW+FRHI+RG P+RHL 
Sbjct: 123 PSDANNGGGFSVPRFCADSCFPPLDFRADPPVQLLSVADIHGVEWRFRHIYRGTPRRHLF 182

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR-------PPTVMPSSVLSSDSM 233
           TTGWS FV+ K+LVAGD+V+F+ +    + +GIRRA R       PP         S + 
Sbjct: 183 TTGWSKFVNHKKLVAGDTVVFVKDSDGIVSVGIRRAARFAAAIETPPPAEREGFSRSTTG 242

Query: 234 HIGLLAAAAHAAATNSC--FTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFE 291
            +   A AA A +      F V + PR   ++FV+   + V+         GMR ++  E
Sbjct: 243 RVTAEAVAAAAESAARNAPFEVVYYPRTGFADFVVS-AEVVEESMKCAWVGGMRVKISME 301

Query: 292 TEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 345
           TE+SS +  Y GT++     +     N  WR ++V WDE    +   +VS W++E
Sbjct: 302 TEDSSRMTWYQGTVSSACASE-----NGPWRMLQVNWDEPEVLQNAKQVSPWQVE 351


>gi|8778678|gb|AAF79686.1|AC022314_27 F9C16.11 [Arabidopsis thaliana]
          Length = 330

 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 121/357 (33%), Positives = 180/357 (50%), Gaps = 76/357 (21%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           +  +LW  CAGPL  +P +G +V YFPQGH E V A+T +E++   PN  +LP +L C++
Sbjct: 1   MYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQPNC-DLPSKLQCRV 59

Query: 68  HNVTMHADVETDEVYAQMTLQP----------LSPEEQKDTFVPIELGIPSKQPTNYFCK 117
             + +  +  +DE Y ++TL P          + P E ++ F PI          N F K
Sbjct: 60  IAIHLKVENNSDETYVEITLMPDTTVSKNLQVVIPTENENQFRPI---------VNSFTK 110

Query: 118 TLTASDTSTHGGFSVPRRAAEKVFPSLDFSL----QP-PAQELIARDLHDVEWKFRHIFR 172
            LTASDTS  G FSVP + A +  P L F      QP PAQELIA DLH  +W+F+H +R
Sbjct: 111 VLTASDTSAQGEFSVPCKHAIECLPPLLFYFIDMSQPIPAQELIAIDLHGNQWRFKHSYR 170

Query: 173 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDS 232
                                  GD ++F                        +  + +S
Sbjct: 171 -----------------------GDVIVF------------------------ARYNIES 183

Query: 233 MHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFET 292
           M  G++A+A HA      F + + PR+  S++++   K++ AV + + +VG ++ M FE 
Sbjct: 184 MRHGVIASAKHAFDNQCMFIMVYKPRS--SQYIVSHEKFLDAV-NNKFNVGSKYTMRFED 240

Query: 293 EESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT 349
           ++ S  RY GTI GISD  P  W  S WRS++V WDE  +  R  +VS W+I+ L +
Sbjct: 241 DDLSETRYFGTIIGISDFSP-HWKCSEWRSLEVQWDEFASFPRPKKVSPWDIKHLMS 296


>gi|242073716|ref|XP_002446794.1| hypothetical protein SORBIDRAFT_06g022810 [Sorghum bicolor]
 gi|241937977|gb|EES11122.1| hypothetical protein SORBIDRAFT_06g022810 [Sorghum bicolor]
          Length = 695

 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 131/374 (35%), Positives = 178/374 (47%), Gaps = 50/374 (13%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G +  ++  LW ACAG + ++P VG  V YFPQGH+E         VD  +P      P 
Sbjct: 43  GRDVDVHPRLWQACAGSMRAVPPVGAAVYYFPQGHAEHAGGAA---VDLRVP------PF 93

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPL---SPEEQKDTFVPIELGIPSKQPTNY----- 114
           + C++  V + AD +TD+VYA++ L PL    P         ++    S+   +      
Sbjct: 94  VPCRVAAVRLMADPDTDDVYARIRLVPLRAWEPVADVGDAALVKTDGSSRGGADGDGDGD 153

Query: 115 -------------FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLH 161
                        F KTLT SD +  GGFSVPR  A  +FP LD+S  PP Q + ARD+H
Sbjct: 154 AGGGQQQQPRPLSFAKTLTPSDANNGGGFSVPRFCALSIFPELDYSFSPPVQFVSARDVH 213

Query: 162 DVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPT 221
            VEW FRHI+R  P+R LL  G  +   AKR       +F          G+  A+  P+
Sbjct: 214 GVEWTFRHIYRSTPRRTLLNPGCRL-RRAKR-------VFCRRGGGGSNAGV--AVAGPS 263

Query: 222 VMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVS 281
                V + D +    LAAA         F V   PRAS  EFV+     VK        
Sbjct: 264 D--GKVPAEDVVEAARLAAAGQP------FEVVHYPRASAPEFVV-RAAAVKESMQAPWC 314

Query: 282 VGMRFRMLFETEE-SSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVS 340
            G+RF+M FETE+ S +  +MGTI G+   DP RW  S WR ++V WDE        RV 
Sbjct: 315 PGLRFKMAFETEDLSRISWFMGTIAGVEPADPARWPQSPWRLLQVTWDEPELLRNVNRVC 374

Query: 341 LWEIEPLTTFPMYP 354
            W +E +++ P  P
Sbjct: 375 PWRVELVSSMPKLP 388



 Score = 44.3 bits (103), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 6/80 (7%)

Query: 682 VKVY-KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 740
            KV+ +S ++GR+LD+S  SS+ EL   L   FGI       LRS   +V+     +V  
Sbjct: 612 CKVFVESDTLGRNLDLSALSSFEELCARLSSFFGINNA---DLRS--HMVYRTIAGEVKH 666

Query: 741 LGDDPWEAFVSNVWYIKILS 760
           +GD+P+  FV +   I IL+
Sbjct: 667 VGDEPFSVFVKSARRITILT 686


>gi|298111080|gb|ADB96360.2| auxin response factor 8 [Arabidopsis thaliana]
          Length = 304

 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 140/326 (42%), Positives = 184/326 (56%), Gaps = 58/326 (17%)

Query: 395 LTTLNFQSLGMFPWMQQRVEPSFLGNDHNQQYQAMLAAGMQS---GDPVRQQFMQLQQP- 450
           L  LN+ S+G+FPWMQQR++ S +G D+NQQYQAMLAAG+Q+   GD +RQQF+QLQ+P 
Sbjct: 1   LLPLNYPSVGLFPWMQQRLDLSQMGTDNNQQYQAMLAAGLQNIGGGDLLRQQFVQLQEPH 60

Query: 451 FQYLQQSGSQNP-LQLKQQ------QHLLQQLNSQAEDRAQQQQQPQQHM---------- 493
            QYLQQS S N  L L+QQ      +HL+      A+ +   +  PQQ+M          
Sbjct: 61  HQYLQQSASHNSDLMLQQQQQQQASRHLM-----HAQTQIMSENLPQQNMRQEVSNQPAG 115

Query: 494 ------------YHDALQIRTDELLQ-RQQSNLPSPSFSKANFMDSSTEISVSISPMQNM 540
                       Y +A +++   L Q +QQS +PSPSF K++F DSS + + + SP    
Sbjct: 116 QQQQLQQPDQNAYLNAFKMQNGHLQQWQQQSEMPSPSFMKSDFTDSSNKFATTASPA--- 172

Query: 541 LGSLPEGSGNLLNFSGAGPSMLRQQFPQQSLGSKYEPSQVRDFVHSMSLPSSYNGKDAAV 600
                 G GNLLNFS  G S+L    P+Q     + P     F   +SLP +Y GK  A+
Sbjct: 173 -----SGDGNLLNFSITGQSVL----PEQLTTEGWSPKASNTFSEPLSLPQAYPGKSLAL 223

Query: 601 GTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFTTSV-DPGVSSMPLGDSGFHNSMYGCM 659
              N     QN  +FGV  D SGL LP+TV  F +S  D   S M L DSGF NS+Y CM
Sbjct: 224 EPGN----PQNPSLFGVDPD-SGLFLPSTVPRFASSSGDAEASPMSLTDSGFQNSLYSCM 278

Query: 660 QDSS-ELLHNVGQIDQLTPTRTFVKV 684
           QD++ ELLH  GQI+    T+ FVKV
Sbjct: 279 QDTTHELLHGAGQINSSNQTKNFVKV 304


>gi|359473508|ref|XP_003631311.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 7-like [Vitis
           vinifera]
          Length = 247

 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 97/218 (44%), Positives = 127/218 (58%), Gaps = 45/218 (20%)

Query: 5   NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLI 64
           N  L  ELWHAC  PLV++P    RV YFPQGH E + A+ ++E+D  +P++ NLP +++
Sbjct: 33  NIALYKELWHACTXPLVNIPHEXERVYYFPQGHMEXLEASMHQELDQKMPSF-NLPSKIL 91

Query: 65  CQ----LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLT 120
           C+    +HN  +H                                         FCKTLT
Sbjct: 92  CKXVNFIHNCIVHP----------------------------------------FCKTLT 111

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
           ASDTSTHGGFSV RR  ++  P LD S  PP QEL+A+D+H  E  FRHIF+GQP+ HLL
Sbjct: 112 ASDTSTHGGFSVLRRHTDECLPPLDMSQNPPWQELVAKDMHGNEXPFRHIFQGQPRCHLL 171

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR 218
           TTGWSVFVS KRL  GD+++F+  E  +L +G+RR  R
Sbjct: 172 TTGWSVFVSTKRLAVGDALIFLRKENGELCVGVRRLTR 209


>gi|226500250|ref|NP_001149486.1| B3 DNA binding domain containing protein [Zea mays]
 gi|195627494|gb|ACG35577.1| B3 DNA binding domain containing protein [Zea mays]
 gi|224031343|gb|ACN34747.1| unknown [Zea mays]
 gi|295844336|gb|ADG43165.1| auxin response factor 31 [Zea mays]
 gi|413920079|gb|AFW60011.1| B3 DNA binding domain containing protein [Zea mays]
          Length = 462

 Score =  188 bits (478), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 121/381 (31%), Positives = 185/381 (48%), Gaps = 59/381 (15%)

Query: 5   NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLI 64
           N  ++ ++W ACA PL  LPTVG  V YFP GH+EQ  A        H+P     P    
Sbjct: 15  NSIVDRDVWLACAAPLSRLPTVGDDVYYFPDGHAEQCPA--------HLPAPLPAPHFFP 66

Query: 65  CQLHNVTMHADVETDEVYAQMTLQP-LSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASD 123
           C + ++++ AD +TDEV+A+++L+P L+   + D   P     P ++P +Y  K L+ SD
Sbjct: 67  CTVTDISLGADDKTDEVFAKISLRPGLAAASRPD---PGSSNSPPREPLSYSIKELSQSD 123

Query: 124 TSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 183
            +  G F VPR   + V+P +DF   PP Q L+  D    +W+FRH++R +  RH+LTTG
Sbjct: 124 ANGGGSFCVPRYCGDHVWPKVDFEADPPMQNLVMHDTTGKQWEFRHVYRAKQPRHVLTTG 183

Query: 184 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGL------ 237
           WS FV+AK LVAGD ++F+      L++G+RR  R    +       D+           
Sbjct: 184 WSKFVNAKLLVAGDIIVFMRRPNGDLIVGLRRMPRYAGTLHRPGTGGDAQDPDQPPPPPP 243

Query: 238 -----------LAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRF 286
                      +  AA  AA    FTV + PR +  EFV+P  + V+ V  T    G   
Sbjct: 244 RNALARVPPKDVMEAARLAAEGRPFTVTYYPRKAAGEFVVPRNE-VEGVLDTLWEPGSHV 302

Query: 287 RMLFETEESSVRRYMGTITGISDLDPVRWSNSH--------WRSVKVGWD---ESTAGER 335
            M F  E    RR M             W++ H        WR++++ WD    + + + 
Sbjct: 303 LMQF-AEAEDTRRTM-------------WADGHVKAIHQKIWRALEIDWDVASSAISAQL 348

Query: 336 QPRVSLWEIEPLTTFPMYPSL 356
              V+ W+++ +     YPS+
Sbjct: 349 GRFVNAWQVQRIA----YPSI 365


>gi|379323240|gb|AFD01319.1| auxin response factor 24 [Brassica rapa subsp. pekinensis]
          Length = 540

 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 112/344 (32%), Positives = 171/344 (49%), Gaps = 51/344 (14%)

Query: 5   NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLI 64
           N  LN +L   CAGPL   P VG           E++  + N E+    P + ++P ++ 
Sbjct: 20  NNYLNGQLLKLCAGPLFDTPKVG-----------EKLVTSINDELCQLKPIF-DIPSKIC 67

Query: 65  CQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDT 124
           C + ++ +  +  T+++YA++ L P    +  D  +PI     + Q  NYF K L+ASDT
Sbjct: 68  CNVFSINLKVENNTNDIYAEVALLP----DTSDVEIPIPKNENNIQNINYFTKVLSASDT 123

Query: 125 STHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 184
              GGF + +R A +  P LD S   P+QE+IA+D+H  +W F+H  RG           
Sbjct: 124 CKTGGFVLYKRHAMECLPLLDMSQLTPSQEIIAKDIHGHKWSFKHTLRG----------- 172

Query: 185 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHA 244
                               E  +  +GI RA      +P+S +S  SMH G++A A + 
Sbjct: 173 --------------------ENGESRVGISRAAHQERNIPTSSISKQSMHHGVVATALNT 212

Query: 245 AATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTI 304
                 F VF+ PR+  S+F++   K+V  V + + S+G +F M FE ++ +  RY GTI
Sbjct: 213 IKNKCMFVVFYKPRS--SQFLVNFDKFVDRV-NNKFSIGSKFSMKFEGKDLNETRYNGTI 269

Query: 305 TGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 348
            G+ D     W +S WRS+KV WD +    R  +VS WEIE LT
Sbjct: 270 VGVGDF-STHWKDSEWRSLKVQWDGTATIPRPDKVSPWEIEMLT 312



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 57/95 (60%), Gaps = 3/95 (3%)

Query: 671 QIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLV 730
           +ID +   R+  KV+  G + R++D++ F  Y++L +EL ++F I+G+    + + W++ 
Sbjct: 422 KIDHVQ-ARSHTKVHMEGVIERTVDLTIFDGYSQLIDELERLFDIKGELH--MHNKWKMF 478

Query: 731 FVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQ 765
           F+  + D+++LGDDPW  F      I I S + V+
Sbjct: 479 FIYDDGDMMILGDDPWTKFCYMAKEIFICSKKGVK 513


>gi|284811247|gb|ADB96362.1| auxin response factor 8 [Arabidopsis thaliana]
          Length = 296

 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 137/318 (43%), Positives = 180/318 (56%), Gaps = 58/318 (18%)

Query: 402 SLGMFPWMQQRVEPSFLGNDHNQQYQAMLAAGMQS---GDPVRQQFMQLQQP-FQYLQQS 457
           S+G+FPWMQQR++ S +G D+NQQYQAMLAAG+Q+   GDP+RQQF+QLQ+P  QYLQQS
Sbjct: 1   SVGLFPWMQQRLDLSQMGTDNNQQYQAMLAAGLQNIGGGDPLRQQFVQLQEPHHQYLQQS 60

Query: 458 GSQNP-LQLKQQ------QHLLQQLNSQAEDRAQQQQQPQQHM----------------- 493
            S N  L L+QQ      +HL+      A+ +   +  PQQ+M                 
Sbjct: 61  ASHNSDLMLQQQQQQQASRHLM-----HAQTQIMSENLPQQNMRQEVSNQPAGQQQQLQQ 115

Query: 494 -----YHDALQIRTDELLQ-RQQSNLPSPSFSKANFMDSSTEISVSISPMQNMLGSLPEG 547
                Y +A +++   L Q +QQS +PSPSF K++F DSS + + + SP          G
Sbjct: 116 PDQNAYLNAFKMQNGHLQQWQQQSEMPSPSFMKSDFTDSSNKFATTASPA--------SG 167

Query: 548 SGNLLNFSGAGPSMLRQQFPQQSLGSKYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNT 607
            GNLLNFS  G S+L    P+Q     + P     F   +SLP +Y GK  A+   N   
Sbjct: 168 DGNLLNFSITGQSVL----PEQLTTEGWSPKASNTFSEPLSLPQAYPGKSLALEPGN--- 220

Query: 608 DSQNSVVFGVHIDSSGLLLPTTVSSFTTSV-DPGVSSMPLGDSGFHNSMYGCMQDSS-EL 665
             QN  +FGV  D SGL LP+TV  F +S  D   S M L DSGF NS+Y CMQD++ EL
Sbjct: 221 -PQNPSLFGVDPD-SGLFLPSTVPRFASSSGDAEASPMSLTDSGFQNSLYSCMQDTTHEL 278

Query: 666 LHNVGQIDQLTPTRTFVK 683
           LH  GQI+    T+ FVK
Sbjct: 279 LHGAGQINSSNQTKNFVK 296


>gi|224084816|ref|XP_002307410.1| predicted protein [Populus trichocarpa]
 gi|222856859|gb|EEE94406.1| predicted protein [Populus trichocarpa]
          Length = 216

 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 96/223 (43%), Positives = 132/223 (59%), Gaps = 23/223 (10%)

Query: 12  LWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLP---PQLICQLH 68
           +W ACAG  V +PT+ +RV YFPQGH EQ +++T      H P   NL    P + CQ+ 
Sbjct: 1   IWRACAGSSVQIPTINSRVYYFPQGHLEQSSSSTAP----HPPFLSNLALSKPLISCQIS 56

Query: 69  NVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTN-------------YF 115
            V   AD  TDEV+ ++ L PL+        +P+    PS+                  F
Sbjct: 57  AVDFLADPVTDEVFIRLLLLPLN---NHSCNLPLSFLEPSRSEGGGVNDVDDDENKILAF 113

Query: 116 CKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQP 175
            K LT SD +  GGFSVPR  A+ +FP L++  +PP Q L   D+H + W FRHI+RG P
Sbjct: 114 AKILTPSDANNGGGFSVPRFCADSIFPPLNYQAEPPVQTLTVTDIHGISWDFRHIYRGTP 173

Query: 176 KRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR 218
           +RHLLTTGWS FV+ K+L+AGDSV+F+ N K ++ +G+RRA+R
Sbjct: 174 RRHLLTTGWSKFVNNKKLIAGDSVVFMRNLKGEMFIGVRRAVR 216


>gi|357123410|ref|XP_003563403.1| PREDICTED: auxin response factor 17-like [Brachypodium distachyon]
          Length = 907

 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 99/197 (50%), Positives = 135/197 (68%), Gaps = 18/197 (9%)

Query: 603 ENCNTDSQNSVVFGVHIDSSGLLLPTTVSSFTTSVDPGVSSMPLGDSGFHN--------- 653
           ++ N+D QN ++FGV+IDS  LL+   + S     D   +++P   S F +         
Sbjct: 689 QDGNSDPQNHLLFGVNIDSQSLLMQGGIPSLHDEND--STTIPYSTSNFLSPSQNDFSLD 746

Query: 654 ---SMYGCMQDSSEL--LHNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREE 708
              +  GC+ +S  +   HN  Q +Q  P  TFVKVYKSG+ GRSLDI+RFSSY+ELR E
Sbjct: 747 QTLNSPGCLDESGYVPCSHNPNQGNQ--PPATFVKVYKSGTYGRSLDITRFSSYHELRRE 804

Query: 709 LGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMG 768
           LG++FG+EG+ EDPLRSGWQLVFVDRE DVLL+GDDPW+ FV++V+ IKILSP++VQ+MG
Sbjct: 805 LGRLFGLEGQLEDPLRSGWQLVFVDREEDVLLVGDDPWQEFVNSVFCIKILSPQEVQQMG 864

Query: 769 EQGVESFSPSSGQRANS 785
           +QG+E  S +  +R  S
Sbjct: 865 KQGLELLSSAPSKRLGS 881


>gi|326518498|dbj|BAJ88278.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 151

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 88/122 (72%), Positives = 100/122 (81%)

Query: 31  VYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPL 90
           ++F +    ++     KEVD+ IPNYPNLPP+LICQLHNV MHAD  TDEVYAQMTLQPL
Sbjct: 30  IFFHRAIVSRLLHQLIKEVDAQIPNYPNLPPRLICQLHNVMMHADAGTDEVYAQMTLQPL 89

Query: 91  SPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQP 150
           SPEEQK+ F+PIELG  SKQPTNYF KTLT S+ STHGGFS+PRR+AEKVFP LDFSLQP
Sbjct: 90  SPEEQKEPFLPIELGGASKQPTNYFYKTLTTSERSTHGGFSLPRRSAEKVFPPLDFSLQP 149

Query: 151 PA 152
           P 
Sbjct: 150 PC 151


>gi|6573757|gb|AAF17677.1|AC009243_4 F28K19.6 [Arabidopsis thaliana]
          Length = 652

 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 127/386 (32%), Positives = 182/386 (47%), Gaps = 51/386 (13%)

Query: 21  VSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNVTMHADVETDE 80
           V +P + +RV YFPQGH E      +    S  P        + C + ++ + AD  TDE
Sbjct: 26  VQIPVLHSRVYYFPQGHVEHCCPLLSTLPSSTSP--------VPCIITSIQLLADPVTDE 77

Query: 81  VYAQMTLQPLSPEEQKDT----FVPIELGIPSKQPTNYFCKTLTASDTSTHGGFSVPRRA 136
           V+A + LQP++ ++   T    F   +  +        F K LT SD +  GGFSVPR  
Sbjct: 78  VFAHLILQPMTQQQFTPTNYSRFGRFDGDVDDNNKVTTFAKILTPSDANNGGGFSVPRFC 137

Query: 137 AEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAG 196
           A+ VFP L+F + PP Q+L   D+H   W FRHI+RG P+RHLLTTGWS FV++K+L+AG
Sbjct: 138 ADSVFPLLNFQIDPPVQKLYVTDIHGAVWDFRHIYRGTPRRHLLTTGWSKFVNSKKLIAG 197

Query: 197 DSVLFIWNEKNQLLLGIRRAIRPPTVMP---------------SSVLSSDSMHI------ 235
           DSV+F+    +++ +G+RR     +                  SSV   D          
Sbjct: 198 DSVVFMRKSADEMFIGVRRTPISSSDGGSSYYGGDEYNGYYSQSSVAKEDDGSPKKTFRR 257

Query: 236 ---GLLAAAAHAAATNSC-----FTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFR 287
              G L A A   A N       F V F P A  SEFV+   + V++      + G R +
Sbjct: 258 SGNGKLTAEAVTDAINRASQGLPFEVVFYPAAGWSEFVV-RAEDVESSMSMYWTPGTRVK 316

Query: 288 MLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKV-------GWDESTAGERQPRVS 340
           M  ETE+SS   +   I   +  +   W  S W+ ++V        WDE    +   RV+
Sbjct: 317 MAMETEDSSRITWFQGIVSSTYQETGPWRGSPWKQLQVYDVFEMITWDEPEILQNVKRVN 376

Query: 341 LWEIEPLTTFPMYPSLFP--LRLKRP 364
            W++E         + FP   RLK P
Sbjct: 377 PWQVEIAAHATQLHTPFPPAKRLKYP 402


>gi|224063158|ref|XP_002301019.1| predicted protein [Populus trichocarpa]
 gi|222842745|gb|EEE80292.1| predicted protein [Populus trichocarpa]
          Length = 215

 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 96/222 (43%), Positives = 131/222 (59%), Gaps = 23/222 (10%)

Query: 13  WHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLP---PQLICQLHN 69
           W ACAG  V +P V +RV YFPQGH EQ +++T      H P   NL    P + CQ+  
Sbjct: 1   WRACAGSSVQIPAVNSRVYYFPQGHFEQSSSSTAP----HPPFLTNLALSKPSIPCQISA 56

Query: 70  VTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSK-------------QPTNYFC 116
           V   AD  TDEV+ ++ L PL   +   + +P+    P +             +    F 
Sbjct: 57  VDFLADPVTDEVFTRLLLIPL---DNPFSNLPLSFLEPCRSEGEGANDVDDDERKILAFS 113

Query: 117 KTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPK 176
           K LT SD +  GGFSVPR  A+ +FP L++  +PP Q L   D+H V W FRHI+RG P+
Sbjct: 114 KILTPSDANNGGGFSVPRFCADSIFPPLNYQAEPPVQTLTVADIHGVSWDFRHIYRGTPR 173

Query: 177 RHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR 218
           RHLLTTGWS FV+ K+L+AGDSV+F+ N K ++ +G+RRA+R
Sbjct: 174 RHLLTTGWSKFVNNKKLIAGDSVVFMRNLKGEMFIGVRRAVR 215


>gi|296278602|gb|ADH04265.1| ARF1 [Nicotiana benthamiana]
          Length = 889

 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 105/219 (47%), Positives = 133/219 (60%), Gaps = 28/219 (12%)

Query: 608 DSQNSVVFGVHIDSSGLLLPTTVSSFTTSVDPGVSSMPLGDSGFHNSM------------ 655
           DSQN+ ++G + D   +L     +   ++ D G  S+P   S F N++            
Sbjct: 672 DSQNNAMYGFNTDCLNILQNGMSNMKDSTGDNGSLSIPYATSTFTNTVGNEYPINSDMTT 731

Query: 656 YGCMQDSSELLHNVGQIDQLTPT-RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFG 714
             C+ D S  L +    DQ  PT RTFVKV+KSGS GRSLDIS+FS+Y+ELR EL  MFG
Sbjct: 732 SSCV-DESGFLQSSENGDQRNPTNRTFVKVHKSGSFGRSLDISKFSNYHELRSELAHMFG 790

Query: 715 IEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVES 774
           +EG  EDP RSGWQLVFVDRENDVLLLGDDPW+ FV+NVWYIKILSP +VQ+MG+ G++ 
Sbjct: 791 LEGLLEDPERSGWQLVFVDRENDVLLLGDDPWQEFVNNVWYIKILSPLEVQQMGKDGLDL 850

Query: 775 FSPSSGQRANSRGNCGRD--------------PVGSLEY 799
            +    QR  S G    D              P+GSL+Y
Sbjct: 851 PNAGLAQRLPSNGVGCDDYMNQKGSRNTMNGIPLGSLDY 889


>gi|147819710|emb|CAN74121.1| hypothetical protein VITISV_034897 [Vitis vinifera]
          Length = 188

 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 92/169 (54%), Positives = 118/169 (69%), Gaps = 2/169 (1%)

Query: 5   NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLI 64
           N  L  ELWHACAGPLV++P    RV YFPQGH EQ+ A+ ++ +D  +P++ NLP +++
Sbjct: 16  NDALYKELWHACAGPLVNVPREQERVYYFPQGHMEQLEASMHQGLDQKMPSF-NLPSKIL 74

Query: 65  CQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDT 124
           C++ NV + A+ ETDEVYAQ+TL P  P++ + T     L  P     + FCKTLTASDT
Sbjct: 75  CKVVNVHLRAEPETDEVYAQVTLLP-EPDQSEITSPDPPLPEPQSCTVHSFCKTLTASDT 133

Query: 125 STHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRG 173
           STHGGFSV RR A++  P LD S  PP QEL+A+DLH  EW FRHIFRG
Sbjct: 134 STHGGFSVLRRHADECLPPLDMSQNPPWQELVAKDLHGNEWHFRHIFRG 182


>gi|242050114|ref|XP_002462801.1| hypothetical protein SORBIDRAFT_02g032210 [Sorghum bicolor]
 gi|241926178|gb|EER99322.1| hypothetical protein SORBIDRAFT_02g032210 [Sorghum bicolor]
          Length = 622

 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 118/361 (32%), Positives = 169/361 (46%), Gaps = 58/361 (16%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           ++ +LW ACAG + ++P VG    YFPQGH+EQ  A  +  V         +PP + C++
Sbjct: 32  VHPQLWQACAGSMCAVPPVGAADYYFPQGHAEQAGAAVDLRV---------VPPFVACRV 82

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTH 127
             V + A+ +TD++YA++ L PL P E         LG  S+       +          
Sbjct: 83  AAVRLMAEPDTDDIYAKIRLVPLRPWEPVTDVGDALLGEGSRGGDGDGQQRRRRRPRP-- 140

Query: 128 GGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 187
                           L F          A+ L   +W FRH++RG P RHL+T GWS F
Sbjct: 141 ----------------LSF----------AKTLTQSDWTFRHVYRGNPPRHLITAGWSNF 174

Query: 188 VSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR-----------PPTVMPS--SVLSSDSMH 234
           V  K+L+ GDSV+F+  E  ++ +G+RRA R                PS   V + D + 
Sbjct: 175 VHNKKLLPGDSVVFVREEDGKVHIGLRRAKRVFCGGNAGRSGAAVAGPSDGKVPAEDVVE 234

Query: 235 IGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEE 294
              LAAA         F V   PRAS  EF +     VK    +    G+RF+M FETE+
Sbjct: 235 AARLAAAGQP------FEVVHYPRASAPEFCV-RADAVKESMRSPWCPGLRFKMAFETED 287

Query: 295 -SSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMY 353
            S +  +MGTI G+   DP RW  S WR ++V WDE    +   RV  W +E +++ P  
Sbjct: 288 LSRISWFMGTIAGVEPADPARWPLSPWRLLQVTWDEPELLQNVKRVCPWRVELVSSMPNL 347

Query: 354 P 354
           P
Sbjct: 348 P 348



 Score = 43.5 bits (101), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 5/80 (6%)

Query: 682 VKVY-KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 740
            KV+ +S ++GR+LD+S   S  EL   L  MFGI    E  LRS   +V+     +V  
Sbjct: 534 CKVFVESETLGRNLDLSALGSLEELCARLSSMFGISNNAE--LRS--HMVYRTISGEVKH 589

Query: 741 LGDDPWEAFVSNVWYIKILS 760
           +GD+P+  FV +   I I +
Sbjct: 590 IGDEPFSVFVKSARRITIYT 609


>gi|357150158|ref|XP_003575362.1| PREDICTED: auxin response factor 6-like [Brachypodium distachyon]
          Length = 915

 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 97/210 (46%), Positives = 136/210 (64%), Gaps = 25/210 (11%)

Query: 595 GKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSF--------TTSVDPGVSSMPL 646
           G+++ V  +  N+D QN ++FGV+IDS  LL+   +           +   D G +++P 
Sbjct: 680 GRESVVDQDE-NSDHQNHLLFGVNIDSQSLLMQDDIPGLQNENDCIASLQDDNGSNTIPY 738

Query: 647 GDSGFHN------------SMYGCMQDSSEL--LHNVGQIDQLTPTRTFVKVYKSGSVGR 692
               F +            +  GC+  S  +    N  Q+++  P  TFVKVYKSG+VGR
Sbjct: 739 STCNFLSPSQNNFPLNEALTSSGCLDGSGYVPFSENPDQVNR--PPATFVKVYKSGAVGR 796

Query: 693 SLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSN 752
            LDI+RFSSY+ELR ELG +FG+EG+ EDP+RSGWQLVFVDRENDVLL+GDDPW+ FV++
Sbjct: 797 LLDITRFSSYHELRSELGHLFGLEGQLEDPVRSGWQLVFVDRENDVLLVGDDPWQEFVNS 856

Query: 753 VWYIKILSPEDVQKMGEQGVESFSPSSGQR 782
           V  IKILSP++VQ+MG+QG+E  S +  +R
Sbjct: 857 VSCIKILSPQEVQQMGKQGIELLSSAPARR 886


>gi|326524452|dbj|BAK00609.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 176

 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 85/132 (64%), Positives = 100/132 (75%), Gaps = 4/132 (3%)

Query: 45  TNKEVDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIEL 104
           T K  +S IPNYP+LP QL+CQ+HN+TMHAD +TDEVYAQM LQP++ E   D F    L
Sbjct: 39  TKKTPNSRIPNYPSLPSQLLCQVHNITMHADKDTDEVYAQMMLQPVNSET--DVFPIQSL 96

Query: 105 G--IPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHD 162
           G    SK P  YFCK LTASD STHGGFS+PRRAA K+FP LD+S+QPP QELI +DLHD
Sbjct: 97  GSYAKSKHPAEYFCKNLTASDMSTHGGFSMPRRAAGKLFPQLDYSMQPPNQELIVQDLHD 156

Query: 163 VEWKFRHIFRGQ 174
             W FRHI+RG+
Sbjct: 157 NMWIFRHIYRGR 168


>gi|357491401|ref|XP_003615988.1| Auxin response factor [Medicago truncatula]
 gi|355517323|gb|AES98946.1| Auxin response factor [Medicago truncatula]
          Length = 170

 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 106/196 (54%), Positives = 125/196 (63%), Gaps = 42/196 (21%)

Query: 93  EEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPA 152
           +EQK+ ++P ELG PSKQPTNYFCKTLTAS  +                           
Sbjct: 5   QEQKEAYLPAELGTPSKQPTNYFCKTLTASQVT--------------------------- 37

Query: 153 QELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIW-------NE 205
            + +  D   +  + +  F     RHLLTTGWSVFVSAK LVAGDSV+F W       NE
Sbjct: 38  -QALTGDCLCLVGRLKKCFL---LRHLLTTGWSVFVSAKILVAGDSVMFTWQCIFFNRNE 93

Query: 206 KNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFV 265
           KNQLL GIR AI P TVMPSSVLS+DS+H+GLLAA AHAAATNS FT+F+NPRA PSEFV
Sbjct: 94  KNQLLFGIRHAIWPQTVMPSSVLSTDSLHLGLLAAVAHAAATNSPFTIFYNPRACPSEFV 153

Query: 266 IP----LTKYVKAVFH 277
           IP    + +YVK V+H
Sbjct: 154 IPSLSIMLEYVKVVYH 169


>gi|326517364|dbj|BAK00049.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 176

 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 85/133 (63%), Positives = 101/133 (75%), Gaps = 6/133 (4%)

Query: 45  TNKEVDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIE- 103
           T K  +S IPNYP+LP QL+CQ+HN+TMHAD +TDEVYAQM LQP++ E       PI+ 
Sbjct: 39  TKKTPNSRIPNYPSLPSQLLCQVHNITMHADKDTDEVYAQMMLQPVNSETN---VFPIQS 95

Query: 104 LG--IPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLH 161
           LG    SK P  YFCK LTASD STHGGFS+PRRAA K+FP LD+S+QPP QELI +DLH
Sbjct: 96  LGSYAKSKHPAEYFCKNLTASDMSTHGGFSMPRRAAGKLFPQLDYSMQPPNQELIVQDLH 155

Query: 162 DVEWKFRHIFRGQ 174
           D  W FRHI+RG+
Sbjct: 156 DNMWIFRHIYRGR 168


>gi|301793227|emb|CBA12004.1| putative auxin response factor 5/7, partial [Gnetum gnemon]
          Length = 881

 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 96/168 (57%), Positives = 114/168 (67%), Gaps = 17/168 (10%)

Query: 254 FFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPV 313
            +NPR SPSEFV+PL KY KA + T+VS+GMRFRM+FETEESSVRRYMGTITGISDLDPV
Sbjct: 1   VYNPRTSPSEFVVPLAKYNKAFYGTQVSIGMRFRMMFETEESSVRRYMGTITGISDLDPV 60

Query: 314 RWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSLFPLRLKRPWHPSTSSF 372
           RW NS WR+++VGWDES AG++Q RVS+WEIE + T F + P  F  RLKRP  P     
Sbjct: 61  RWPNSQWRNLQVGWDESGAGDKQNRVSIWEIETVATPFFICPPFF--RLKRPLLPGILG- 117

Query: 373 NDNRDETAS--GLNWLRGGTGEQGLTTLNFQS----LGMFPWM--QQR 412
            D+  E AS     WLR          L+FQ+     G+  WM  QQR
Sbjct: 118 EDSEIEAASKRSFPWLREEND-----VLDFQNPLPGAGLDAWMGLQQR 160



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 61/97 (62%), Positives = 82/97 (84%)

Query: 677 PTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           P RT+ KVYK G+VGRS+D++R+ +Y ELR EL +MFG+EG+ EDP ++GWQLVFVD EN
Sbjct: 769 PMRTYTKVYKLGNVGRSIDVTRYKNYGELRHELARMFGLEGQLEDPKKTGWQLVFVDHEN 828

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVE 773
           D+LL+GDDPWE FVS V YIKILSP++V +M ++G++
Sbjct: 829 DILLVGDDPWEEFVSCVRYIKILSPQEVLQMSQEGMD 865


>gi|224062579|ref|XP_002300855.1| predicted protein [Populus trichocarpa]
 gi|222842581|gb|EEE80128.1| predicted protein [Populus trichocarpa]
          Length = 201

 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 89/150 (59%), Positives = 113/150 (75%), Gaps = 8/150 (5%)

Query: 626 LPTTVSSFTTSVDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTP-TRTFVKV 684
           +P T S+FT++     S +PL      +S   C+ D S  L +   +DQ+ P TRTFVKV
Sbjct: 1   MPFTASTFTSATG---SDIPLTSDMTASS---CV-DESGFLQSSENVDQVNPSTRTFVKV 53

Query: 685 YKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDD 744
           +KSGS GRSLDIS+FSSY+ELR EL ++F +EG+ ED  RSGWQLVFVDRENDVLLLGDD
Sbjct: 54  HKSGSYGRSLDISKFSSYDELRSELARLFCLEGQLEDRQRSGWQLVFVDRENDVLLLGDD 113

Query: 745 PWEAFVSNVWYIKILSPEDVQKMGEQGVES 774
           PW+ FV+NVWYIKILSP +VQ+MG++G+ S
Sbjct: 114 PWQEFVNNVWYIKILSPLEVQQMGKEGLTS 143


>gi|359497444|ref|XP_003635519.1| PREDICTED: auxin response factor 6-like [Vitis vinifera]
          Length = 109

 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 77/88 (87%), Positives = 82/88 (93%)

Query: 85  MTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSL 144
           MTLQPLSP+EQKD ++P ELG+PSKQP+NYFCKTL ASDTSTHGGFSVPRRAAEKVFP L
Sbjct: 1   MTLQPLSPQEQKDAYLPAELGVPSKQPSNYFCKTLIASDTSTHGGFSVPRRAAEKVFPPL 60

Query: 145 DFSLQPPAQELIARDLHDVEWKFRHIFR 172
           DFS QPPAQELIARDLHD EWKFRHIFR
Sbjct: 61  DFSQQPPAQELIARDLHDNEWKFRHIFR 88


>gi|124359419|gb|ABN05872.1| Transcriptional factor B3 [Medicago truncatula]
          Length = 207

 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 86/202 (42%), Positives = 123/202 (60%), Gaps = 10/202 (4%)

Query: 20  LVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNVTMHADVETD 79
           +V +P V ++V YFPQGH+E      N    S IP++      + C++ ++   A+ ETD
Sbjct: 1   MVQMPEVNSQVFYFPQGHAEHACEPVNFSAYSKIPSF------IPCRVEDIRYMANHETD 54

Query: 80  EVYAQMTLQPLSPEE---QKDTFVPIELGIPSKQPTNYFCKTLTASDTSTHGGFSVPRRA 136
           EVYA++ L P++  +     D    I +   +K     F KTLT SD +  GGFS PR  
Sbjct: 55  EVYAKLRLVPMNINQVSFDNDGVAGINVS-ETKDKHQSFAKTLTQSDANNGGGFSCPRYC 113

Query: 137 AEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAG 196
           AE +FP +D+S  PP Q +  +D+H  +W FRH++RG PKRHLLTTGWS FVS K+L +G
Sbjct: 114 AEMIFPRMDYSGNPPFQGIYPKDVHGEKWHFRHVYRGTPKRHLLTTGWSPFVSDKKLASG 173

Query: 197 DSVLFIWNEKNQLLLGIRRAIR 218
           DSV+F+ +E  +L +GI R  R
Sbjct: 174 DSVVFLRSENGELRVGIWREKR 195


>gi|224103213|ref|XP_002334077.1| predicted protein [Populus trichocarpa]
 gi|222869513|gb|EEF06644.1| predicted protein [Populus trichocarpa]
          Length = 163

 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 85/134 (63%), Positives = 106/134 (79%), Gaps = 5/134 (3%)

Query: 658 CMQDSSEL--LHNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGI 715
           C+ +S  L  + NVGQ +   P+RTFVKVYKSGS GRSLDI++FS+YNELR EL  MFG+
Sbjct: 6   CIDESGFLQSMENVGQGN--PPSRTFVKVYKSGSFGRSLDITKFSNYNELRSELAFMFGL 63

Query: 716 EGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESF 775
           EG+ EDPLRSGWQLVF+DRENDVLLLGD PW  FV++VW IKILSP++VQ+MG++G+E  
Sbjct: 64  EGQLEDPLRSGWQLVFIDRENDVLLLGDGPWPEFVNSVWCIKILSPQEVQQMGKRGLELL 123

Query: 776 SPSSGQRANSRGNC 789
           +    QR  S G+C
Sbjct: 124 NSVPIQRL-SNGSC 136


>gi|297746266|emb|CBI16322.3| unnamed protein product [Vitis vinifera]
          Length = 546

 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/264 (38%), Positives = 142/264 (53%), Gaps = 28/264 (10%)

Query: 130 FSVPRRAAEKVFPSLDFSLQP--PA------------------QELIARDLHDVEWKFRH 169
           F  P+  AE    ++DF+  P  PA                  + +IA+D+H   WKFRH
Sbjct: 31  FYFPQGHAEHAHTNVDFAAAPRIPALVLCRVAAVKFMADPETDETVIAKDVHGEIWKFRH 90

Query: 170 IFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLS 229
           I+RG P+RHLLTTGWS FV+ K+LVAGDS++F+  E   L +GIRRA R        +  
Sbjct: 91  IYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKRGIAGSGGGLRG 150

Query: 230 SDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRML 289
              +    +  AA  AA    F V + PRAS  EF +  +  V++    +   GMRF+M 
Sbjct: 151 GRRVRPESVVEAATLAANGQPFEVVYYPRASTPEFCVKASG-VRSAVRIQWCSGMRFKMP 209

Query: 290 FETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 348
           FETE+SS +  +MGTI+ +   DP+RW NS WR ++V WDE    +   RVS W +E ++
Sbjct: 210 FETEDSSRISWFMGTISSVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVS 269

Query: 349 TFPMYPSLFPL-----RLKRPWHP 367
             P+   L P      +L+ P HP
Sbjct: 270 NMPII-HLSPFSPPRKKLRIPQHP 292



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 6/75 (8%)

Query: 6  KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLIC 65
          K L+S+LWHACAG +V +P V ++V YFPQGH+E   A TN +  +     P +P  ++C
Sbjct: 6  KSLDSQLWHACAGGMVQMPLVSSKVFYFPQGHAEH--AHTNVDFAA----APRIPALVLC 59

Query: 66 QLHNVTMHADVETDE 80
          ++  V   AD ETDE
Sbjct: 60 RVAAVKFMADPETDE 74



 Score = 42.4 bits (98), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 6/88 (6%)

Query: 682 VKVY-KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 740
            KV+ +S  VGRSLD+S   SY EL   L  MFGIE        +   +++ D    V  
Sbjct: 437 CKVFMESEDVGRSLDLSVLGSYEELYTRLANMFGIERS-----ETFSHVLYRDATGAVKH 491

Query: 741 LGDDPWEAFVSNVWYIKILSPEDVQKMG 768
            GD+P+  F      + IL       +G
Sbjct: 492 TGDEPFSDFTKKAKRLTILMDSGSNNIG 519


>gi|297740767|emb|CBI30949.3| unnamed protein product [Vitis vinifera]
          Length = 160

 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 90/157 (57%), Positives = 111/157 (70%), Gaps = 17/157 (10%)

Query: 658 CMQDSSELL--HNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGI 715
           C+ +S  L    NVGQ++   PTRTFVKVYKSGS GRSLDI++FSSY+ELR EL +MFG+
Sbjct: 6   CIDESGFLQSPENVGQVN--PPTRTFVKVYKSGSFGRSLDITKFSSYHELRGELARMFGL 63

Query: 716 EGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESF 775
           EG+ EDP RSGWQLVFVDRENDVLLLGDDPW  FV++VW IKILS ++VQ+MG++G+E  
Sbjct: 64  EGQLEDPRRSGWQLVFVDRENDVLLLGDDPWPEFVNSVWCIKILSLQEVQQMGKRGLELL 123

Query: 776 SPSSGQRANSRG-------------NCGRDPVGSLEY 799
           +    QR  S               + G   VGSL+Y
Sbjct: 124 NSVPIQRLTSSSCDDYASRQDSRNLSTGITSVGSLDY 160


>gi|15218584|ref|NP_175062.1| auxin response factor 23 [Arabidopsis thaliana]
 gi|46576660|sp|Q9LP07.2|ARFW_ARATH RecName: Full=Putative auxin response factor 23
 gi|332193887|gb|AEE32008.1| auxin response factor 23 [Arabidopsis thaliana]
          Length = 222

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 90/217 (41%), Positives = 127/217 (58%), Gaps = 18/217 (8%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G    +  +LW  CAGPL  +P +G +V YFPQGH E V A+T +E++   PN  +LP +
Sbjct: 19  GSKSYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQPNC-DLPSK 77

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQP-----LSPEEQKDTFVPIELGIPSKQPTNYFCK 117
           L C++  + +  +  +DE Y ++TL P     + P E ++ F PI          N F K
Sbjct: 78  LQCRVIAIHLKVENNSDETYVEITLMPDTTQVVIPTENENQFRPI---------VNSFTK 128

Query: 118 TLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKR 177
            LTASDTS  G FSVP + A +  P LD S   PAQELIA DLH  +W+F+H +R  P+ 
Sbjct: 129 VLTASDTSAQGEFSVPCKHAIECLPPLDMSQPIPAQELIAIDLHGNQWRFKHSYR-VPRG 187

Query: 178 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIR 214
              TTGW+ F ++K+LV GD ++F   E  +L +GIR
Sbjct: 188 D--TTGWNAFTTSKKLVVGDVIVFARGETGELRVGIR 222


>gi|326512192|dbj|BAJ96077.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 123

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 76/90 (84%), Positives = 82/90 (91%), Gaps = 4/90 (4%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G+ +CLNSELWHACAGPLVSLP VG+RV+YFPQGHSEQVAA+TNKEVD+ IPNYPNLPPQ
Sbjct: 19  GEQRCLNSELWHACAGPLVSLPAVGSRVIYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQ 78

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSP 92
           LICQLHN    ADVETDEVYAQMTLQ LSP
Sbjct: 79  LICQLHN----ADVETDEVYAQMTLQLLSP 104


>gi|357445391|ref|XP_003592973.1| Auxin response factor [Medicago truncatula]
 gi|355482021|gb|AES63224.1| Auxin response factor [Medicago truncatula]
          Length = 456

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 113/374 (30%), Positives = 188/374 (50%), Gaps = 16/374 (4%)

Query: 11  ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 70
           E+WH CA   V +P + +RV YFPQGH E  A+ ++  +        +  P  +C +  V
Sbjct: 13  EIWHTCATAAVKIPKLHSRVYYFPQGHLEN-ASPSSSSITHTHSFLQSFRPFTLCIVSAV 71

Query: 71  TMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTHGGF 130
            + AD  TDEV+ ++ L P++ +   +        +  +     F KTLT SD +    F
Sbjct: 72  DLLADPHTDEVFVKLLLTPITNDVHLENPKEEVANLNDRNEVVSFVKTLTRSDVNNARSF 131

Query: 131 SVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL-TTGWSVFVS 189
            +PR  A+ VFP LD   +  +Q L   D+H    KF H+ RG PKR++L  + W+ FV 
Sbjct: 132 HIPRFCADNVFPQLDLEAESSSQHLFVTDVHGEVSKFYHVCRGFPKRNMLYISEWNSFVK 191

Query: 190 AKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAATNS 249
            K+LVAGDSV+F+ +   ++ +GIRR  +   V  ++    D +   ++ A    A  N 
Sbjct: 192 RKKLVAGDSVIFMKDSTGKIFVGIRRNTQ--FVAAAAEQKKDELEKAVMEALK-LAEENK 248

Query: 250 CFTVFFNPRASP-SEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGIS 308
            F + + P+     +FV+      +++   ++    R R+  +T++SS   Y GTI+ +S
Sbjct: 249 AFEIVYYPQGDDWCDFVVDGNVVDESM---KIQWNPRMRVKMKTDKSSRIPYQGTISIVS 305

Query: 309 DLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWHPS 368
                R SN  WR ++V WDE    +   RV+ W +E ++  P  P+ FP   K     S
Sbjct: 306 -----RTSNL-WRMLQVNWDEFQVSQIPRRVNPWWVELISHKPA-PTPFPQTKKFRTTQS 358

Query: 369 TSSFNDNRDETASG 382
           ++  +D ++   +G
Sbjct: 359 SAQLSDKKETLLNG 372


>gi|356551606|ref|XP_003544165.1| PREDICTED: auxin response factor 17-like [Glycine max]
          Length = 545

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 127/369 (34%), Positives = 186/369 (50%), Gaps = 50/369 (13%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           ++ ++W ACAG  V +P + +RV YFPQGH E   A+ +  ++  + + P +P    C +
Sbjct: 9   VDPKIWRACAGAAVQIPKLHSRVYYFPQGHLEH--ASPSHYLNPLLRSLPFVP----CHV 62

Query: 68  HNVTMHADVETDEVYAQMTLQPLSP------------EEQKDTFVPIELGIPSKQPTNYF 115
            ++   AD  +DEV+A+  L PLS             EE+KD     E G+ S      F
Sbjct: 63  SSLDFLADPFSDEVFAKFLLTPLSQQPFPNDTTEARNEEEKDR----ENGVVS------F 112

Query: 116 CKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQP 175
            K LT SD +  GGFSVPR  A+  FP LDF    P+   +A     V    RHI+RG P
Sbjct: 113 SKILTPSDANNGGGFSVPRYCADSWFPPLDFXXXXPSSP-VATSRRRV--ALRHIYRGTP 169

Query: 176 KRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGI------RRAIRPPTVMPSSVLS 229
           +RHL TTGWS FV+ K+LVAGD+V+F+ +   ++ +GI        AI  P   P+    
Sbjct: 170 RRHLFTTGWSKFVNHKKLVAGDTVVFVKDSDGRVSVGIRRAARFAAAIETPQPPPAEREG 229

Query: 230 SDSMHIGLLAAAAHAAATNSC-----FTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGM 284
                 G + A A AAA  S      F V + PR   ++FV+   + V+         GM
Sbjct: 230 FSRSATGRVTAEAVAAAAESAARNAPFEVVYYPRTGFADFVVS-AEVVEESMKCAWVGGM 288

Query: 285 RFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWE 343
           R ++  ETE+SS +  + GT++     +     N  WR ++V WDE    +   RVS W+
Sbjct: 289 RVKIAMETEDSSRMTWFQGTVSSACASE-----NGPWRMLQVNWDEPEVLQNAKRVSPWQ 343

Query: 344 IEPLTTFPM 352
           +E L + P 
Sbjct: 344 VE-LVSLPF 351


>gi|170677526|gb|ACB30835.1| ARF6, partial [Arabidopsis thaliana]
 gi|170677528|gb|ACB30836.1| ARF6, partial [Arabidopsis thaliana]
 gi|170677530|gb|ACB30837.1| ARF6, partial [Arabidopsis thaliana]
 gi|170677532|gb|ACB30838.1| ARF6, partial [Arabidopsis thaliana]
 gi|170677534|gb|ACB30839.1| ARF6, partial [Arabidopsis thaliana]
 gi|170677536|gb|ACB30840.1| ARF6, partial [Arabidopsis thaliana]
 gi|170677538|gb|ACB30841.1| ARF6, partial [Arabidopsis thaliana]
 gi|170677540|gb|ACB30842.1| ARF6, partial [Arabidopsis thaliana]
 gi|170677542|gb|ACB30843.1| ARF6, partial [Arabidopsis thaliana]
 gi|170677544|gb|ACB30844.1| ARF6, partial [Arabidopsis thaliana]
 gi|170677546|gb|ACB30845.1| ARF6, partial [Arabidopsis thaliana]
 gi|170677548|gb|ACB30846.1| ARF6, partial [Arabidopsis thaliana]
 gi|170677550|gb|ACB30847.1| ARF6, partial [Arabidopsis thaliana]
 gi|170677552|gb|ACB30848.1| ARF6, partial [Arabidopsis thaliana]
 gi|170677554|gb|ACB30849.1| ARF6, partial [Arabidopsis thaliana]
 gi|170677556|gb|ACB30850.1| ARF6, partial [Arabidopsis thaliana]
 gi|170677560|gb|ACB30852.1| ARF6, partial [Arabidopsis thaliana]
 gi|170677562|gb|ACB30853.1| ARF6, partial [Arabidopsis thaliana]
 gi|170677564|gb|ACB30854.1| ARF6, partial [Arabidopsis thaliana]
 gi|170677566|gb|ACB30855.1| ARF6, partial [Arabidopsis thaliana]
 gi|170677568|gb|ACB30856.1| ARF6, partial [Arabidopsis thaliana]
 gi|170677570|gb|ACB30857.1| ARF6, partial [Arabidopsis thaliana]
 gi|170677572|gb|ACB30858.1| ARF6, partial [Arabidopsis thaliana]
          Length = 113

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/96 (77%), Positives = 88/96 (91%)

Query: 678 TRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 737
           + TFVKVYKSGS GRSLDIS+FSSY+ELR EL +MFG+EG+ EDP+RSGWQLVFVDREND
Sbjct: 3   SNTFVKVYKSGSFGRSLDISKFSSYHELRSELARMFGLEGQLEDPVRSGWQLVFVDREND 62

Query: 738 VLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVE 773
           VLLLGDDPW  FVS+VW IKILSP++VQ+MG++G+E
Sbjct: 63  VLLLGDDPWPEFVSSVWCIKILSPQEVQQMGKRGLE 98


>gi|170677558|gb|ACB30851.1| ARF6, partial [Arabidopsis thaliana]
          Length = 113

 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 73/96 (76%), Positives = 88/96 (91%)

Query: 678 TRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 737
           + TFVKVYKSGS GRSLDIS+FSSY+ELR EL +MFG+EG+ E+P+RSGWQLVFVDREND
Sbjct: 3   SNTFVKVYKSGSFGRSLDISKFSSYHELRSELARMFGLEGQLENPVRSGWQLVFVDREND 62

Query: 738 VLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVE 773
           VLLLGDDPW  FVS+VW IKILSP++VQ+MG++G+E
Sbjct: 63  VLLLGDDPWPEFVSSVWCIKILSPQEVQQMGKRGLE 98


>gi|222636108|gb|EEE66240.1| hypothetical protein OsJ_22412 [Oryza sativa Japonica Group]
          Length = 630

 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 122/380 (32%), Positives = 172/380 (45%), Gaps = 79/380 (20%)

Query: 155 LIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIR 214
           ++A+D+H V WKFRHI+RG P+RHLLTTGWS FV+ K+LVAGDS++F+  E   L +GIR
Sbjct: 98  VLAKDVHGVVWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFMRTENGDLCVGIR 157

Query: 215 RAIRPPTVMP----------------------SSVLSSDSMHIGLLAA------------ 240
           RA +     P                      S  L  D     + AA            
Sbjct: 158 RAKKGGVGGPEFLPPPPPPPPTPAAGGNYGGFSMFLRGDDDGNKMAAAARGKVRARVRPE 217

Query: 241 ----AAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS 296
               AA+ A +   F V + PRAS  EF +     V+A   T+   GMRF+M FETE+SS
Sbjct: 218 EVVEAANLAVSGQPFEVVYYPRASTPEFCVK-AGAVRAAMRTQWFAGMRFKMAFETEDSS 276

Query: 297 -VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS 355
            +  +MGT++ +   DP+RW NS WR ++V WDE    +   RVS W +E ++  P    
Sbjct: 277 RISWFMGTVSAVQVADPIRWPNSPWRLLQVSWDEPDLLQNVKRVSPWLVELVSNMPAI-H 335

Query: 356 LFPL-----RLKRPWHPS--------TSSFNDN------------RDETASGLNWLRGGT 390
           L P      +L  P +P         T  F+ N             D T +G+   R   
Sbjct: 336 LAPFSPPRKKLCVPLYPELPIDGQFPTPMFHGNPLARGVGPMCYFPDGTPAGIQGARHAQ 395

Query: 391 GEQGLTTLNFQSLGMFPWMQQRVEPSFLGN-DHNQQYQAMLAAGMQSGDPVRQQ----FM 445
               L+ L+   L      Q  + P  L   DH  Q +  +AAG+  G P  +      +
Sbjct: 396 FGISLSDLHLNKL------QSSLSPHGLHQLDHGMQPR--IAAGLIIGHPAARDDISCLL 447

Query: 446 QLQQPFQYLQQSGSQNPLQL 465
            +  P    +  G + P QL
Sbjct: 448 TIGSPQNNKKSDGKKAPAQL 467



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/88 (40%), Positives = 54/88 (61%), Gaps = 11/88 (12%)

Query: 5  NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIP-NYPN--LPP 61
          +KCL+ +LWHACAG +V +P V ++V YFPQGH+E            H P  +P   +P 
Sbjct: 17 DKCLDPQLWHACAGGMVQMPPVSSKVYYFPQGHAEH--------AQGHGPVEFPGGRVPA 68

Query: 62 QLICQLHNVTMHADVETDEVYAQMTLQP 89
           ++C++  V   AD +TDEV+A++ L P
Sbjct: 69 LVLCRVAGVRFMADPDTDEVFAKIRLVP 96


>gi|224085429|ref|XP_002307573.1| predicted protein [Populus trichocarpa]
 gi|222857022|gb|EEE94569.1| predicted protein [Populus trichocarpa]
          Length = 137

 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 84/142 (59%), Positives = 103/142 (72%), Gaps = 8/142 (5%)

Query: 624 LLLPTTVSSFTTSVDPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTP-TRTFV 682
           L +P   S+FT++     S +PL      +S   C+ D S  L +   +DQ+ P TRTFV
Sbjct: 3   LSMPFAASTFTSATG---SDIPLNSDMTASS---CV-DESGFLQSSENVDQVNPSTRTFV 55

Query: 683 KVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLG 742
           KV+KSGS GRSLDIS+FSSY+ELR EL ++F +EG  EDP RSGWQLVF DRENDVLLLG
Sbjct: 56  KVHKSGSYGRSLDISKFSSYDELRSELARLFCLEGLLEDPQRSGWQLVFGDRENDVLLLG 115

Query: 743 DDPWEAFVSNVWYIKILSPEDV 764
           DDPW+ FV+NVWYIKILSP +V
Sbjct: 116 DDPWQEFVNNVWYIKILSPLEV 137


>gi|295918075|gb|ADG60256.1| ARF8-like protein [Nicotiana tabacum]
          Length = 119

 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 77/119 (64%), Positives = 92/119 (77%), Gaps = 7/119 (5%)

Query: 688 GSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWE 747
           G  GRSLDI++F SY+ELR ELGQMFGIEG  EDP RSGWQLVFVDREND+LLLGDDPWE
Sbjct: 1   GVCGRSLDITQFHSYHELRRELGQMFGIEGFLEDPQRSGWQLVFVDRENDILLLGDDPWE 60

Query: 748 AFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANSRGNC-------GRDPVGSLEY 799
           AFV+NVWYIKILSPEDVQK+G++  +S +  + +R +S  +        G   +GSLEY
Sbjct: 61  AFVNNVWYIKILSPEDVQKLGKEEAKSLNRGAVERMSSSTSADDRDLVSGMPSLGSLEY 119


>gi|226501654|ref|NP_001146279.1| uncharacterized protein LOC100279854 [Zea mays]
 gi|219886495|gb|ACL53622.1| unknown [Zea mays]
 gi|407232696|gb|AFT82690.1| ARF9 ARF type transcription factor, partial [Zea mays subsp. mays]
 gi|414878010|tpg|DAA55141.1| TPA: hypothetical protein ZEAMMB73_057592 [Zea mays]
          Length = 888

 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 79/141 (56%), Positives = 101/141 (71%), Gaps = 16/141 (11%)

Query: 638 DPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTR--TFVKVYKSGSVGRSLD 695
           +P  +S  LG+SG  NS+                +  + P++  TFVKVYKSGS GRSLD
Sbjct: 726 NPIATSSCLGESGTFNSL--------------DDVCGVNPSQGGTFVKVYKSGSPGRSLD 771

Query: 696 ISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWY 755
           I+RFSSY ELR EL ++FG+EG+ EDP+RSGWQLVFVDREND+LL+GDDPW+ FV++VW 
Sbjct: 772 ITRFSSYYELRSELERLFGLEGQLEDPVRSGWQLVFVDRENDILLVGDDPWQEFVNSVWC 831

Query: 756 IKILSPEDVQKMGEQGVESFS 776
           IKILSP+DVQ+M   G +  S
Sbjct: 832 IKILSPQDVQQMVRGGGDLLS 852


>gi|414878008|tpg|DAA55139.1| TPA: hypothetical protein ZEAMMB73_057592 [Zea mays]
          Length = 886

 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 79/141 (56%), Positives = 101/141 (71%), Gaps = 16/141 (11%)

Query: 638 DPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTR--TFVKVYKSGSVGRSLD 695
           +P  +S  LG+SG  NS+                +  + P++  TFVKVYKSGS GRSLD
Sbjct: 724 NPIATSSCLGESGTFNSL--------------DDVCGVNPSQGGTFVKVYKSGSPGRSLD 769

Query: 696 ISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWY 755
           I+RFSSY ELR EL ++FG+EG+ EDP+RSGWQLVFVDREND+LL+GDDPW+ FV++VW 
Sbjct: 770 ITRFSSYYELRSELERLFGLEGQLEDPVRSGWQLVFVDRENDILLVGDDPWQEFVNSVWC 829

Query: 756 IKILSPEDVQKMGEQGVESFS 776
           IKILSP+DVQ+M   G +  S
Sbjct: 830 IKILSPQDVQQMVRGGGDLLS 850


>gi|300373056|gb|ADG43143.1| auxin response factor 9 [Zea mays]
          Length = 881

 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 79/141 (56%), Positives = 101/141 (71%), Gaps = 16/141 (11%)

Query: 638 DPGVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTR--TFVKVYKSGSVGRSLD 695
           +P  +S  LG+SG  NS+                +  + P++  TFVKVYKSGS GRSLD
Sbjct: 719 NPIATSSCLGESGTFNSL--------------DDVCGVNPSQGGTFVKVYKSGSPGRSLD 764

Query: 696 ISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWY 755
           I+RFSSY ELR EL ++FG+EG+ EDP+RSGWQLVFVDREND+LL+GDDPW+ FV++VW 
Sbjct: 765 ITRFSSYYELRSELERLFGLEGQLEDPVRSGWQLVFVDRENDILLVGDDPWQEFVNSVWC 824

Query: 756 IKILSPEDVQKMGEQGVESFS 776
           IKILSP+DVQ+M   G +  S
Sbjct: 825 IKILSPQDVQQMVRGGGDLLS 845


>gi|357486975|ref|XP_003613775.1| Auxin response factor [Medicago truncatula]
 gi|355515110|gb|AES96733.1| Auxin response factor [Medicago truncatula]
          Length = 410

 Score =  152 bits (383), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 102/332 (30%), Positives = 155/332 (46%), Gaps = 40/332 (12%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           ++ ++W  CAG  V +P + + V YFP GH E V+ + N    S +       P   C +
Sbjct: 9   VDPKIWQCCAGAAVKIPKLNSHVYYFPLGHLEHVSPSPNPSTLSLLDRSRQFIP---CTV 65

Query: 68  HNVTMHADVETDEVYAQMTLQPLSP-----------EEQKDTFVPIELGIPSKQPTNYFC 116
             V + AD  TDEV+ ++ L P +            E+Q D    +  G           
Sbjct: 66  STVNLLADPVTDEVFVKLLLTPGTNNCVHEPPPEVREDQHDGVKVVSSG----------- 114

Query: 117 KTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPK 176
           KTLT SD +  G FSVP   A+ +FP LD   + P+Q+L   D+H  EWK RH++RG P 
Sbjct: 115 KTLTPSDANNGGAFSVPSECAKLIFPPLDLQAEKPSQKLSVTDIHGKEWKLRHVYRGTPL 174

Query: 177 RHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIG 236
           RHL+TT WS FV  K+L+ GDS++F+          I   I       ++ ++  S    
Sbjct: 175 RHLITTNWSEFVDEKKLIGGDSLVFMKKSTRTGTETISVGIHRQKFGAATKIAEKS---- 230

Query: 237 LLAAAAHAAATNSCFTVFFNPRASP-SEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEES 295
            +  A   A  N  F V + P A    +FV+   K V+     + + G+R +   + + S
Sbjct: 231 -VTEAVELAEKNMAFDVVYYPTAEGWCDFVVN-AKVVEDAMKNKWNSGLRIKHSLKKDNS 288

Query: 296 SVR--RYMGTITGISDLDPVRWSNSHWRSVKV 325
           S R   + GTI+ +S        N  WR ++V
Sbjct: 289 SKRCSNFEGTISALSA------PNRPWRMLEV 314


>gi|326493184|dbj|BAJ85053.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 614

 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 79/153 (51%), Positives = 106/153 (69%), Gaps = 5/153 (3%)

Query: 213 IRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYV 272
            RRA+R  + +PSSV+SS SMH+G+LA A HA  T S FTV++ PR SPSEF+IP  +Y+
Sbjct: 37  FRRAMRQLSNVPSSVISSHSMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYM 96

Query: 273 KAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTA 332
           ++V     S+GMRFRM FE EE+  +R+ GTI G  +LD + W  S+WRS+KV WDE + 
Sbjct: 97  ESV-KNNYSIGMRFRMRFEGEEAPEQRFTGTIVGSENLDQL-WPESNWRSLKVRWDEPST 154

Query: 333 GERQPRVSLWEIEPLTTFPMYPSLFPL-RLKRP 364
             R  RVS W+IEP ++ P+ P   PL R+KRP
Sbjct: 155 IPRPDRVSPWKIEPASSPPVNP--LPLSRVKRP 185



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 44/94 (46%), Positives = 62/94 (65%), Gaps = 2/94 (2%)

Query: 678 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           TR+  KV+K G ++GRS+D+S+F  Y+EL  EL +MF   G+     R  WQ+V+ D E 
Sbjct: 492 TRSCTKVHKQGVALGRSVDLSKFGDYDELTAELDRMFEFGGELMSSNRD-WQIVYTDPEG 550

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQ 770
           D++L+GDDPWE F S V  I I + E+VQKM  +
Sbjct: 551 DMMLVGDDPWEEFCSIVRKIFIYTKEEVQKMNSK 584


>gi|49617493|gb|AAT67457.1| auxin response factor, partial [Trifolium repens]
          Length = 116

 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 78/119 (65%), Positives = 87/119 (73%), Gaps = 6/119 (5%)

Query: 318 SHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWHPSTSSFNDNRD 377
           SHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPS FPLRLKRPW P   SFN  +D
Sbjct: 1   SHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLKRPWPPGLPSFNGMKD 60

Query: 378 E---TASGLNWLRGGTGEQGLTTLNFQSLGMFPWMQQRVEPSFLGNDHNQQYQAMLAAG 433
           +     S L WLR    ++GL +LNFQ +G+ PWMQ R +PS L N     YQA+ AA 
Sbjct: 61  DDFGMNSPLMWLR--DTDRGLPSLNFQGIGLNPWMQPRFDPSML-NMQTDMYQAVAAAA 116


>gi|357489169|ref|XP_003614872.1| Auxin response factor [Medicago truncatula]
 gi|355516207|gb|AES97830.1| Auxin response factor [Medicago truncatula]
          Length = 523

 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 100/369 (27%), Positives = 176/369 (47%), Gaps = 38/369 (10%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           ++S++W   AGP V +P +G++V YF +GH E   ++ N E +  +   P   P ++C +
Sbjct: 9   VDSKIWQIRAGPAVKIPKIGSKVYYFSEGHLEHACSSPNIETELLLCLRP---PSVLCII 65

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTN-------------- 113
            +V + A++ TDEV+A++ L P++ +       P     P K+  +              
Sbjct: 66  SSVDLLANLHTDEVFAKLLLTPVTTDGSVQIQEPAPPDFPDKEENDGNNLVVQVQEPAPP 125

Query: 114 --------------YFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARD 159
                          + K LT SDT    G  VPR   E +FP+LD      +++L   D
Sbjct: 126 EVPDEEDDDSNNLVSYVKILTQSDT--QSGLFVPRECMELIFPNLDLEDPMQSEKLSVTD 183

Query: 160 LHDVEWKFRHIFRGQP-KRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGI-RRAI 217
           + DV W +++ +  +    +  TTGWS FV  K+LVA DSV+FI N   ++ +GI R+A+
Sbjct: 184 IQDVVWTYKYSYHVKKLNSYKFTTGWSQFVRKKKLVALDSVVFIKNSAGKIFVGICRKAM 243

Query: 218 RPPTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFH 277
            P T        S+++    +  A   A  N  F V + P A+  +FV+  +   +A+ +
Sbjct: 244 YPATEEEGG--KSENLTEKAVKDAVELAGKNMAFQVVYYPTANWCDFVVDASVVDEAMKN 301

Query: 278 T-RVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQ 336
                +G++ R+      +S + Y      IS++  V  +   WR ++V WD     +  
Sbjct: 302 GWEFGMGIKLRLNEFASSNSKKTYYQPKGTISNMSNVPSNVPSWRMLQVNWDGPDISQNP 361

Query: 337 PRVSLWEIE 345
            RV+ W+++
Sbjct: 362 NRVNPWQVD 370


>gi|413920088|gb|AFW60020.1| hypothetical protein ZEAMMB73_636851 [Zea mays]
          Length = 366

 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 81/215 (37%), Positives = 121/215 (56%), Gaps = 11/215 (5%)

Query: 3   GD-NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 61
           GD +  ++ ++W ACA P   +PTVG  V YFP GH+EQ        + + +P     P 
Sbjct: 12  GDGDSIVDRDVWLACAVPFSRVPTVGAEVYYFPDGHAEQ-------HLLAPLPASHRFP- 63

Query: 62  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPS-KQPTNYFCKTLT 120
              C + +V++ A+  TDEV+A+++L+P      +    P      S +Q  +YF   L 
Sbjct: 64  -CTCTVTDVSLGAEDRTDEVFAKISLRPGPAAASRPEPGPGPGSSNSTRQGLSYFVNELL 122

Query: 121 ASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
             DTST G F +PR   E +FP LD +  PP Q+L+ RD     W+F HI+  + ++H L
Sbjct: 123 HRDTSTSGMFCIPRYCTEHIFPKLDLNANPPEQDLVMRDTRGKPWQFHHIYVVKIRQHRL 182

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRR 215
           T GWS FV AK LVAGD+++F+ +    L+LG+RR
Sbjct: 183 TAGWSEFVDAKLLVAGDTIVFMRHPNGDLILGLRR 217


>gi|345289915|gb|AEN81449.1| AT2G28350-like protein, partial [Capsella rubella]
 gi|345289917|gb|AEN81450.1| AT2G28350-like protein, partial [Capsella rubella]
 gi|345289919|gb|AEN81451.1| AT2G28350-like protein, partial [Capsella rubella]
 gi|345289921|gb|AEN81452.1| AT2G28350-like protein, partial [Capsella rubella]
 gi|345289923|gb|AEN81453.1| AT2G28350-like protein, partial [Capsella rubella]
 gi|345289925|gb|AEN81454.1| AT2G28350-like protein, partial [Capsella rubella]
 gi|345289927|gb|AEN81455.1| AT2G28350-like protein, partial [Capsella rubella]
 gi|345289929|gb|AEN81456.1| AT2G28350-like protein, partial [Capsella rubella]
          Length = 152

 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 66/118 (55%), Positives = 88/118 (74%), Gaps = 2/118 (1%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F KTLT SD +  GGFSVPR  AE +FP LD++ +PP Q +IA+D+H   WKFRHI+RG 
Sbjct: 12  FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGT 71

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDS 232
           P+RHLLTTGWS FV+ K+L+AGDS++F+ +E   L +GIRRA R    + S+ L+SD+
Sbjct: 72  PRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKRGG--LGSNGLASDN 127


>gi|302808953|ref|XP_002986170.1| hypothetical protein SELMODRAFT_425183 [Selaginella moellendorffii]
 gi|300146029|gb|EFJ12701.1| hypothetical protein SELMODRAFT_425183 [Selaginella moellendorffii]
          Length = 283

 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 78/172 (45%), Positives = 100/172 (58%), Gaps = 40/172 (23%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           GD K +N  LW  C GPL++LP +G++VVYFPQG++EQV A+T KE D  IP        
Sbjct: 8   GDKKAINQALWLECPGPLITLPAIGSQVVYFPQGYTEQVVASTQKEADFDIP-------- 59

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
            I  L     HAD E DEV+AQMTLQP S  +  D F+  + GI +KQ    F +TLT  
Sbjct: 60  -ISHL-----HADQENDEVFAQMTLQPFS--QTADPFLLPDFGIQTKQTIVSFSRTLT-- 109

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
                                 DF+  PPAQEL+ARDLH++EW+FRHI+RG+
Sbjct: 110 ----------------------DFTQTPPAQELVARDLHNIEWRFRHIYRGR 139


>gi|218198775|gb|EEC81202.1| hypothetical protein OsI_24228 [Oryza sativa Indica Group]
          Length = 627

 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 168/365 (46%), Gaps = 52/365 (14%)

Query: 5   NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIP-NYPN--LPP 61
           +KCL+ +LWHACAG +V +P V ++V YFPQGH+E            H P  +P   +P 
Sbjct: 17  DKCLDPQLWHACAGGMVQMPPVSSKVYYFPQGHAEH--------AQGHGPVEFPGGRVPA 68

Query: 62  QLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQ------KDTFVPIELGIPSKQPTNYF 115
            ++C++  V   AD +TDEV+A++ L P+   EQ       D           ++    F
Sbjct: 69  LVLCRVAGVRFMADPDTDEVFAKIRLVPVRANEQGYAGDADDGIGAAAAAAAQEEKPASF 128

Query: 116 CKTLTASDTSTHGGFSVPRR---AAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFR 172
            KTLT SD +  GG  V ++   A + +               +  +  D+    R   +
Sbjct: 129 AKTLTQSDANNGGGTFVNQKKLVAGDSIV-------------FMRTENGDLCVGIRRAKK 175

Query: 173 ---GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIW--NEKNQLLLGIRRAIRPPTVMPSSV 227
              G P+             A     G   +F+   ++ N++    R  +R   V P  V
Sbjct: 176 GGVGGPEFLPPPPPPPPPTPAAGGNYGGFSMFLRGDDDGNKMAAAARGKVR-ARVRPEEV 234

Query: 228 LSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFR 287
           +            AA+ A +   F V + PRAS  EF +     V+A   T+   GMRF+
Sbjct: 235 VE-----------AANLAVSGQPFEVVYYPRASTPEFCVK-AGAVRAAMRTQWFAGMRFK 282

Query: 288 MLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEP 346
           M FETE+SS +  +MGT++ +   DP+RW NS WR ++V WDE    +   RVS W +E 
Sbjct: 283 MAFETEDSSRISWFMGTVSAVQVADPIRWPNSPWRLLQVSWDEPDLLQNVKRVSPWLVEL 342

Query: 347 LTTFP 351
           ++  P
Sbjct: 343 VSNMP 347


>gi|295829036|gb|ADG38187.1| AT2G28350-like protein [Capsella grandiflora]
          Length = 134

 Score =  142 bits (358), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 62/104 (59%), Positives = 80/104 (76%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F KTLT SD +  GGFSVPR  AE +FP LD++ +PP Q +IA+D+H   WKFRHI+RG 
Sbjct: 3   FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGT 62

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR 218
           P+RHLLTTGWS FV+ K+L+AGDS++F+ +E   L +GIRRA R
Sbjct: 63  PRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKR 106


>gi|295829038|gb|ADG38188.1| AT2G28350-like protein [Neslia paniculata]
          Length = 135

 Score =  142 bits (358), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 62/104 (59%), Positives = 80/104 (76%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F KTLT SD +  GGFSVPR  AE +FP LD++ +PP Q +IA+D+H   WKFRHI+RG 
Sbjct: 3   FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGT 62

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR 218
           P+RHLLTTGWS FV+ K+L+AGDS++F+ +E   L +GIRRA R
Sbjct: 63  PRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKR 106


>gi|295829030|gb|ADG38184.1| AT2G28350-like protein [Capsella grandiflora]
          Length = 134

 Score =  142 bits (358), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 66/118 (55%), Positives = 88/118 (74%), Gaps = 2/118 (1%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F KTLT SD +  GGFSVPR  AE +FP LD++ +PP Q +IA+D+H   WKFRHI+RG 
Sbjct: 3   FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGT 62

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDS 232
           P+RHLLTTGWS FV+ K+L+AGDS++F+ +E   L +GIRRA R    + S+ L+SD+
Sbjct: 63  PRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKRGG--LGSNGLTSDN 118


>gi|295829026|gb|ADG38182.1| AT2G28350-like protein [Capsella grandiflora]
 gi|295829028|gb|ADG38183.1| AT2G28350-like protein [Capsella grandiflora]
 gi|295829032|gb|ADG38185.1| AT2G28350-like protein [Capsella grandiflora]
          Length = 134

 Score =  142 bits (358), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 62/104 (59%), Positives = 80/104 (76%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F KTLT SD +  GGFSVPR  AE +FP LD++ +PP Q +IA+D+H   WKFRHI+RG 
Sbjct: 3   FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGT 62

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR 218
           P+RHLLTTGWS FV+ K+L+AGDS++F+ +E   L +GIRRA R
Sbjct: 63  PRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKR 106


>gi|295829034|gb|ADG38186.1| AT2G28350-like protein [Capsella grandiflora]
          Length = 138

 Score =  142 bits (358), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 66/118 (55%), Positives = 88/118 (74%), Gaps = 2/118 (1%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F KTLT SD +  GGFSVPR  AE +FP LD++ +PP Q +IA+D+H   WKFRHI+RG 
Sbjct: 3   FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGT 62

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDS 232
           P+RHLLTTGWS FV+ K+L+AGDS++F+ +E   L +GIRRA R    + S+ L+SD+
Sbjct: 63  PRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKRGG--LGSNGLTSDN 118


>gi|302818562|ref|XP_002990954.1| hypothetical protein SELMODRAFT_451392 [Selaginella moellendorffii]
 gi|300141285|gb|EFJ07998.1| hypothetical protein SELMODRAFT_451392 [Selaginella moellendorffii]
          Length = 824

 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 76/168 (45%), Positives = 101/168 (60%), Gaps = 4/168 (2%)

Query: 608 DSQNSVVFGVHIDSSGLLLPTTVSSFTTSVDPGVSSMPLGDSGFHNSMYGCMQDSSELLH 667
           DS++ ++FGV I+   +   T  S    S D     +    S  H S      +    L 
Sbjct: 639 DSRSHLLFGVSIEPECI---TPSSQGPKSKDGQQRVLGSTSSDLHLSSDNGTLEEPAYLQ 695

Query: 668 NVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGW 727
                  + P RTF KVYK+GSVGRSLD++R + Y+ LR EL +MFG+EG+ EDP RSGW
Sbjct: 696 RSSSAQPMLP-RTFTKVYKTGSVGRSLDLTRLNCYDGLRSELARMFGLEGQLEDPHRSGW 754

Query: 728 QLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESF 775
           QLVFVD ENDVLL+GDDPWE FVS V  IKI+SP ++  M ++ + + 
Sbjct: 755 QLVFVDNENDVLLVGDDPWEEFVSCVRCIKIMSPSELSHMNQEQLNAI 802


>gi|23343944|gb|AAN16891.1| auxin-responsive factor protein [Mirabilis jalapa]
          Length = 137

 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 71/117 (60%), Positives = 87/117 (74%), Gaps = 4/117 (3%)

Query: 650 GFHNSMYGCMQDSSEL--LHNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELRE 707
           G   S   C+ +S  L  + NV Q +Q  PTRTFVKV+K GS GRSLDIS+FSSY ELR 
Sbjct: 23  GSEMSTTSCIDESGYLQSIENVDQTNQ--PTRTFVKVHKMGSFGRSLDISQFSSYQELRS 80

Query: 708 ELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDV 764
           EL ++FG+E + +D  RSG QLVFVDRENDVLLLGDDPW+ FV  V +I+ILSP++V
Sbjct: 81  ELARLFGLENELKDSPRSGSQLVFVDRENDVLLLGDDPWQEFVKTVGHIRILSPQEV 137


>gi|414586336|tpg|DAA36907.1| TPA: hypothetical protein ZEAMMB73_585430 [Zea mays]
          Length = 273

 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 87/222 (39%), Positives = 115/222 (51%), Gaps = 23/222 (10%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F K LTASD +    FSV    A+ VFP LD+SL  P Q +  RD+H VEW F HI+RG 
Sbjct: 57  FTKVLTASDANNGDVFSVLANCAKAVFPELDYSLGTPKQFVCVRDVHGVEWMFCHIWRGS 116

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSS-------- 226
           PKRHLLT GW+ FV+ K+L  GDSV+F+  E +++ +G+RR  R    M  +        
Sbjct: 117 PKRHLLTAGWNNFVNTKKLRFGDSVVFMREEDSKIHVGLRRTNRLFGAMQGNGGGPAGAV 176

Query: 227 -VLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMR 285
              S   +    + AAA  A     F V + P  + SEF + +            +V   
Sbjct: 177 VGPSDGKVSTEDVVAAARLAGAGLWFEVVYYPHVASSEFCVSVA-----------AVKES 225

Query: 286 FRMLFETEESS---VRRYMGTITGISDLDPVRWSNSHWRSVK 324
            +M FETEESS   V  +MGTI  +   DP  W  S WR +K
Sbjct: 226 MQMAFETEESSRVKVSLFMGTIANVEATDPAWWPESPWRLLK 267


>gi|357489189|ref|XP_003614882.1| Auxin response factor [Medicago truncatula]
 gi|355516217|gb|AES97840.1| Auxin response factor [Medicago truncatula]
          Length = 377

 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 163/344 (47%), Gaps = 23/344 (6%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           ++ ++W  C GP V +P + ++V YFP+GH E   ++      + +  Y +  P   C +
Sbjct: 9   VDPKIWQICVGPDVKIPKIHSKVYYFPRGHLEHACSSPTAATRTILDRYRSSIP---CIV 65

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTH 127
            +V +  D  TDEV+A++ L P++ +E     VP +         +Y  KTLT SD +  
Sbjct: 66  SSVDLFVDPHTDEVFAKLLLTPVTDQEPPPPVVPGQEDDDGDNLVSYV-KTLTQSDCTR- 123

Query: 128 GGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 187
               VP   +  +FP LD      +Q +   DL + EW++ + +    + H   TGW  F
Sbjct: 124 -VLCVPIECSNLIFPKLDLD---KSQSITVTDLKNQEWRYTYTYSNSSRLH---TGWLNF 176

Query: 188 VSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAAT 247
           V  K+LVA DSV+FI N   ++ +GIRR  +  T   +    + +  I +L  AA  A  
Sbjct: 177 VREKKLVANDSVVFIKNSAGKISVGIRRNTKFTTDEAAEGSENLTDEIKVL-DAAELAEK 235

Query: 248 NSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-----VRRYMG 302
           N+ F V + P AS     +   K V          GMR ++  +  ESS     + +  G
Sbjct: 236 NTAFDVVYYPTASGWRDFVVDAKTVDDAMKIGWKSGMRVKLPLKKYESSNSKMTISQLKG 295

Query: 303 TITGISDLDPVRWSN-SHWRSVKVGWDESTAGERQPRVSLWEIE 345
           TI+ + +      SN  +WR ++V WD     +    V+ W++E
Sbjct: 296 TISFVFNHS----SNVPNWRILEVNWDGLDIPQIPNLVNPWQVE 335


>gi|413920953|gb|AFW60885.1| hypothetical protein ZEAMMB73_247628 [Zea mays]
          Length = 192

 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 68/140 (48%), Positives = 96/140 (68%), Gaps = 4/140 (2%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           + +ELW+ CAGPLV++P VG +V YFPQGH EQV A+TN+  + H+  Y +LP +++C++
Sbjct: 39  MYTELWNLCAGPLVTVPRVGDKVYYFPQGHIEQVEASTNQVAEQHMQFY-DLPWKILCEV 97

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIP---SKQPTNYFCKTLTASDT 124
            NV + A+ + DEVYAQ+TL P S  E+  +   +    P   ++   + FCKTLTASDT
Sbjct: 98  MNVELKAEPDNDEVYAQLTLLPESKPEENGSSEEMPASPPAALARPRVHSFCKTLTASDT 157

Query: 125 STHGGFSVPRRAAEKVFPSL 144
           STHGGFSV RR A++  P L
Sbjct: 158 STHGGFSVLRRHADECLPPL 177


>gi|296086012|emb|CBI31453.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 103/367 (28%), Positives = 155/367 (42%), Gaps = 109/367 (29%)

Query: 5   NKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLI 64
           +KCL+ +LWHACAG +V +P++ +RVVYFPQGH+E      +          P +PP ++
Sbjct: 12  DKCLDPQLWHACAGGMVHMPSLNSRVVYFPQGHAEHAYGNVDF-------GNPRIPPLVL 64

Query: 65  CQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDT 124
           C++  V   AD E+DE          +PE+                    F KTLT SD 
Sbjct: 65  CRVSAVKYLADPESDE----------APEKPAS-----------------FAKTLTQSDA 97

Query: 125 STHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGW 184
           +  GG+S                                   F +      K++L+    
Sbjct: 98  NNGGGWS----------------------------------NFVN------KKNLVAGDS 117

Query: 185 SVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRP-----------------PTVMPSSV 227
            VF+ A              E   L +GIRRA R                  P +  S+ 
Sbjct: 118 IVFLRA--------------ENGDLCVGIRRAKRAGCGPEGYSGFLREDENRPILTHSNA 163

Query: 228 --LSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMR 285
                  +    +A AA  AA    F + + PRAS  EF +  +  V+A    +   GM+
Sbjct: 164 GFRGKGRVRAESVAEAATLAANGQPFVIVYYPRASTPEFCVKASS-VRAAMQIQWCPGMK 222

Query: 286 FRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEI 344
           F+M FET++SS +  +MG I+ +   DP+RW NS WR ++V WDE    +   RV+ W +
Sbjct: 223 FKMAFETDDSSRISWFMGNISSVHVNDPIRWPNSPWRLLQVTWDEPDLLQNVKRVNPWLV 282

Query: 345 EPLTTFP 351
           E ++  P
Sbjct: 283 ELVSHVP 289


>gi|357445417|ref|XP_003592986.1| Auxin response factor [Medicago truncatula]
 gi|357445443|ref|XP_003592999.1| Auxin response factor [Medicago truncatula]
 gi|355482034|gb|AES63237.1| Auxin response factor [Medicago truncatula]
 gi|355482047|gb|AES63250.1| Auxin response factor [Medicago truncatula]
          Length = 323

 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 92/314 (29%), Positives = 152/314 (48%), Gaps = 36/314 (11%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           ++ ++W  C G  V +P + +RV YFPQGH E  A++++     H  +     P  IC +
Sbjct: 17  VHPQIWQTCTGAAVQIPKLHSRVYYFPQGHLEH-ASSSSSNAYIHSLDLQRFRPFTICII 75

Query: 68  HNVTMHADVETDEVYAQMTLQPLS-----------PEEQKDTFVPIELGIPSKQPTNYFC 116
             V + AD  TDEV+A++ L P++           P    D  V  E+        + F 
Sbjct: 76  SAVDLLADPHTDEVFAKLLLTPVTNNSCVQDPHEVPNCSNDDDVCDEV-------IDSFT 128

Query: 117 KTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPK 176
           + L  ++ S H  F +PR  AE +FP L   +   +Q L+  D+H   WKF H+  G  K
Sbjct: 129 RILALTNVSKH-AFYIPRFCAENMFPPLGMEV---SQHLLVTDVHGEVWKFHHVCHGFAK 184

Query: 177 RHLL-TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHI 235
           R++  T+ W+ FV  K+L  GD+V+F+ N   +L +GIRR         ++    D +  
Sbjct: 185 RNVFYTSEWASFVERKKLDVGDAVVFMKNSTGKLFVGIRRK-------DAAEQKKDELEK 237

Query: 236 GLLAAAAHAAATNSCFTVFFNPRASP-SEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEE 294
            ++ A    A  N  F + + PR     +FV+      +++   ++    R R+  +T++
Sbjct: 238 AVMEAVK-LAEENKPFEIVYYPRGDDWCDFVVDGNIVDESM---KIQWNPRMRVKMKTDK 293

Query: 295 SSVRRYMGTITGIS 308
           SS   Y GTIT +S
Sbjct: 294 SSRIPYQGTITTVS 307


>gi|209419738|gb|ACI46673.1| auxin response factor 8 [Solanum lycopersicum]
          Length = 96

 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 64/96 (66%), Positives = 74/96 (77%), Gaps = 6/96 (6%)

Query: 710 GQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGE 769
           GQMFGIEG  EDP RSGWQLVFVDREND+LLLGDDPWEAFV+NVWYIKILSPEDVQK+G+
Sbjct: 1   GQMFGIEGFLEDPQRSGWQLVFVDRENDILLLGDDPWEAFVNNVWYIKILSPEDVQKLGK 60

Query: 770 QGVESFSPSSGQRANSRGNCGRDPV------GSLEY 799
           +  ES +  + +R +S     RD +      GSLEY
Sbjct: 61  EEAESLNRGAVERMSSTNADDRDLISGMPSLGSLEY 96


>gi|147765452|emb|CAN60440.1| hypothetical protein VITISV_032287 [Vitis vinifera]
          Length = 893

 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 59/69 (85%), Positives = 65/69 (94%)

Query: 76  VETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTHGGFSVPRR 135
           V+TDEVYAQMTLQPLSP+EQKD ++P ELG+PSKQP+NYFCKTL ASDTSTHGGFSVPRR
Sbjct: 374 VKTDEVYAQMTLQPLSPQEQKDAYLPAELGVPSKQPSNYFCKTLIASDTSTHGGFSVPRR 433

Query: 136 AAEKVFPSL 144
           AAEKVFP L
Sbjct: 434 AAEKVFPPL 442


>gi|20146083|emb|CAD29695.1| early auxin-induced protein 22 [Arabidopsis thaliana]
          Length = 278

 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 70/144 (48%), Positives = 96/144 (66%), Gaps = 6/144 (4%)

Query: 640 GVSSMPLGDSGFHNSMYGCMQDSSELLHNVGQI--DQLTPTRTFVKVYKSGSVGRSLDIS 697
           G+ S+P    G  N + G + DS   + N G +  +Q    RT+ KV K GSVGRS+D++
Sbjct: 113 GIPSIPF-KPGCSNEV-GGINDSG--IMNGGGLWPNQTQRMRTYTKVQKRGSVGRSIDVT 168

Query: 698 RFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIK 757
           R+S Y+ELR +L +MFGIEG+ EDPL S W+LV+ D END+LL+GDDPWE FV+ V  IK
Sbjct: 169 RYSGYDELRHDLARMFGIEGQLEDPLTSDWKLVYTDHENDILLVGDDPWEEFVNCVQNIK 228

Query: 758 ILSPEDVQKMGEQGVESFSPSSGQ 781
           ILS  +VQ+M   G  +  P++ Q
Sbjct: 229 ILSSVEVQQMSLDGDLAAIPTTNQ 252


>gi|357489363|ref|XP_003614969.1| Auxin response factor [Medicago truncatula]
 gi|355516304|gb|AES97927.1| Auxin response factor [Medicago truncatula]
          Length = 377

 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 161/344 (46%), Gaps = 23/344 (6%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
           ++ ++W  CAGP V +P + ++V YFP+GH E   ++      + +  Y +  P   C +
Sbjct: 9   VDPKIWQICAGPDVKIPKIHSKVYYFPRGHLEHACSSPTAATRTILDRYRSSIP---CIV 65

Query: 68  HNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTH 127
            +V +  D  TDEV+A++ L P++ +E     VP +         +Y  KTLT SD +  
Sbjct: 66  SSVDLFVDPHTDEVFAKLLLTPVTDQEPPPPVVPGQEDDDGDNLVSYV-KTLTQSDCTR- 123

Query: 128 GGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 187
               VP   +  +FP LD      +Q +   DL + E  + + +    + H   TGW  F
Sbjct: 124 -VLCVPIECSNLIFPKLDLD---KSQSITVTDLKNQERGYTYTYSNSSRLH---TGWLNF 176

Query: 188 VSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAAT 247
           V  K+LVA DSV+FI N   ++ +GIRR  +  T        + +  I +L  AA  A  
Sbjct: 177 VREKKLVANDSVVFIKNSAGKISVGIRRKTKFTTDEADEGSENLTDEIKVL-DAAELAEK 235

Query: 248 NSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-----VRRYMG 302
           N+ F V + P AS     +   K V          GMR ++  +  ESS     + +  G
Sbjct: 236 NTAFDVVYYPTASGWRDFVVDAKTVDDAMKIGWKSGMRVKLPLKKYESSNSKMTISQLKG 295

Query: 303 TITGISDLDPVRWSN-SHWRSVKVGWDESTAGERQPRVSLWEIE 345
           TI+ + +      SN  +WR ++V WD     +    V+ W++E
Sbjct: 296 TISFVYN----HSSNVPNWRMLEVNWDGLDIPQNPNLVNPWQVE 335


>gi|357489515|ref|XP_003615045.1| Auxin response factor [Medicago truncatula]
 gi|355516380|gb|AES98003.1| Auxin response factor [Medicago truncatula]
          Length = 239

 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 72/206 (34%), Positives = 112/206 (54%), Gaps = 12/206 (5%)

Query: 10  SELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHN 69
           +++W  C G  V +P + ++V YFPQGH + V+  T   + + +  YP   P + C +  
Sbjct: 37  TKIWQKCVGASVKIPKLHSKVYYFPQGHLKHVSPHT---IITLLHCYP---PSISCIISA 90

Query: 70  VTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNY----FCKTLTASDTS 125
           V +  D  TDEV+A++ L P+      +   P E  +P++    Y    F K LT SD +
Sbjct: 91  VDLLVDPHTDEVFAKLLLTPVMDGHGHEQEAPPE--VPAEDDDGYNVVSFVKILTQSDCN 148

Query: 126 THGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWS 185
           +  GF VP    + + P L      P+Q+L   D+    W++ HI+RG+ KRHL + GW+
Sbjct: 149 SGCGFIVPLPCVDLILPKLSLDDPMPSQKLSVTDIQGRIWQYTHIYRGKSKRHLFSRGWT 208

Query: 186 VFVSAKRLVAGDSVLFIWNEKNQLLL 211
            FV+ K+LVAGDS +FI N    L+L
Sbjct: 209 SFVNNKKLVAGDSFVFIKNSAWWLML 234


>gi|297598571|ref|NP_001045857.2| Os02g0141100 [Oryza sativa Japonica Group]
 gi|255670593|dbj|BAF07771.2| Os02g0141100, partial [Oryza sativa Japonica Group]
          Length = 304

 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 58/97 (59%), Positives = 73/97 (75%)

Query: 675 LTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDR 734
           L   RTF KVYK G+VGRS+DI R+S Y EL+  L +MFGIEG+ ED  R GW+LV+ D 
Sbjct: 167 LQRMRTFTKVYKRGAVGRSIDIGRYSGYEELKHALARMFGIEGQLEDRQRIGWKLVYKDH 226

Query: 735 ENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 771
           E+D+LLLGDDPWE FV+ V  I+ILSP++VQ+M   G
Sbjct: 227 EDDILLLGDDPWEEFVNCVRCIRILSPQEVQQMSLDG 263


>gi|2618731|gb|AAB84358.1| IAA21 [Arabidopsis thaliana]
          Length = 381

 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 62/112 (55%), Positives = 81/112 (72%), Gaps = 1/112 (0%)

Query: 679 RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 738
           RT+ KV K GSVGRS+D++R+  Y+ELR +L +MFGIEG+ EDP  S W+LV+VD END+
Sbjct: 254 RTYTKVQKRGSVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHENDI 313

Query: 739 LLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQRANSRGNCG 790
           LL+GDDPWE FV+ V  IKILS  +VQ+M   G  +  P + Q A S G+ G
Sbjct: 314 LLVGDDPWEEFVNCVQSIKILSSAEVQQMSLDGNFAGVPVTNQ-ACSGGDSG 364


>gi|442751169|gb|JAA67744.1| Putative auxin response factor [Ixodes ricinus]
          Length = 155

 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 68/142 (47%), Positives = 90/142 (63%), Gaps = 16/142 (11%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           G    L  E W ACAGPLV +  VG RV  FPQGH EQ+ A+TN+E++  IP + NLPP+
Sbjct: 23  GVKDALYEEFWKACAGPLVDVLKVGERVYCFPQGHMEQLEASTNQELNQRIPMF-NLPPK 81

Query: 63  LICQLHNVTMHADVETDEVYAQMTL-------QPLSPEEQKDTFVPIELGIPSKQPTNYF 115
           ++C++ N+ + A+ +TDEVYAQ+TL       +P+SP+       P E   P K   + F
Sbjct: 82  ILCRVFNIQLLAEQDTDEVYAQITLMPEADQTEPISPDS-----CPEE---PPKPDVHSF 133

Query: 116 CKTLTASDTSTHGGFSVPRRAA 137
           CK LTASDTSTHG FSV R+  
Sbjct: 134 CKVLTASDTSTHGEFSVLRKTC 155


>gi|149390661|gb|ABR25348.1| auxin responsive protein [Oryza sativa Indica Group]
          Length = 209

 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 56/99 (56%), Positives = 75/99 (75%)

Query: 675 LTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDR 734
           L   RTF KVYK G+VGRS+D+S+FS Y+EL+  L +MF IEG+ E+  R GW+LV+ D 
Sbjct: 71  LKRMRTFTKVYKRGAVGRSIDMSQFSGYDELKHALARMFSIEGQLEERQRIGWKLVYKDH 130

Query: 735 ENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVE 773
           E+D+LLLGDDPWE FV  V  I+ILSP++VQ+M  +G +
Sbjct: 131 EDDILLLGDDPWEEFVGCVKCIRILSPQEVQQMSLEGCD 169


>gi|1711205|gb|AAB92474.1| IAA23 [Arabidopsis thaliana]
          Length = 591

 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 54/92 (58%), Positives = 69/92 (75%)

Query: 680 TFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVL 739
              KV K GSVGRS+D++R+  Y+ELR +L +MFGIEG+ EDP  S W+LV+VD END+L
Sbjct: 480 NLYKVQKRGSVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHENDIL 539

Query: 740 LLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 771
           L+GDDPWE FV+ V  IKILS  +VQ+M   G
Sbjct: 540 LVGDDPWEEFVNCVQSIKILSSAEVQQMSLDG 571


>gi|302761230|ref|XP_002964037.1| hypothetical protein SELMODRAFT_28604 [Selaginella moellendorffii]
 gi|300167766|gb|EFJ34370.1| hypothetical protein SELMODRAFT_28604 [Selaginella moellendorffii]
          Length = 113

 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 53/88 (60%), Positives = 72/88 (81%), Gaps = 2/88 (2%)

Query: 677 PTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           PTRT+ KVYK GS+GR++D++RFS+Y ELR EL +MF ++G+ +   +SGWQLVF+D E 
Sbjct: 28  PTRTYTKVYKLGSIGRAVDVTRFSNYTELRWELARMFNLDGQLDQ--KSGWQLVFIDHEG 85

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPEDV 764
           D+LL+GDDPWE FVS+V  I+ILSP +V
Sbjct: 86  DILLVGDDPWEEFVSSVRGIRILSPSEV 113


>gi|2262117|gb|AAB63625.1| auxin inducible protein isolog [Arabidopsis thaliana]
          Length = 497

 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 67/146 (45%), Positives = 91/146 (62%), Gaps = 18/146 (12%)

Query: 8   LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNK-EVDSHIPNYPNLPPQLICQ 66
           L  ELW  CAGPLV +P    RV YFPQGH EQ+ A+T + ++++  P +  LPP+++C 
Sbjct: 44  LYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLF-VLPPKILCN 102

Query: 67  LHNVTMHADVETDEVYAQMTL--------QPLSPEEQKDTFVPIELGIPSKQPTNYFCKT 118
           + NV++ A+ +TDEVYAQ+TL        +P+SP+       P EL  P     + F K 
Sbjct: 103 VMNVSLQAEKDTDEVYAQITLIPVGTEVDEPMSPDPS-----PPELQRPK---VHSFSKV 154

Query: 119 LTASDTSTHGGFSVPRRAAEKVFPSL 144
           LTASDTSTHGGFSV R+ A +  P L
Sbjct: 155 LTASDTSTHGGFSVLRKHATECLPPL 180



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 52/161 (32%), Positives = 85/161 (52%), Gaps = 6/161 (3%)

Query: 611 NSVVFGVHIDSSGLLLPTTVSSFTTSVD---PGVSSMPLGDSGFHNSMYGCMQDSSELLH 667
           N  +FG+ + SS L +P   ++    ++   P + S     S          Q+ +E   
Sbjct: 311 NYRLFGIDLMSSSLAVPEEKTAPMRPINISKPTMDSHSDPKSEISKVSEEKKQEPAEGSP 370

Query: 668 NVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSG 726
              Q  Q + TR+  KV   G  VGR++D++    YNEL +++ ++F I+G+     R+ 
Sbjct: 371 KEVQSKQSSSTRSRTKVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDIKGELRS--RNQ 428

Query: 727 WQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           W++VF D E D++L+GDDPW  F + V  I I S E+V+KM
Sbjct: 429 WEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKM 469


>gi|168037231|ref|XP_001771108.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162677641|gb|EDQ64109.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 160

 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 55/91 (60%), Positives = 70/91 (76%)

Query: 679 RTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDV 738
           RTF KV+K GSVGRSLD+  F++Y ELR+EL +MF ++   EDP  SGWQ+VFVD END 
Sbjct: 30  RTFTKVHKLGSVGRSLDVRIFNTYAELRKELAKMFHLDCLMEDPPTSGWQIVFVDNENDT 89

Query: 739 LLLGDDPWEAFVSNVWYIKILSPEDVQKMGE 769
           LLLGDDPWE F++ V  IKILSP +V ++ +
Sbjct: 90  LLLGDDPWEDFLNCVRSIKILSPSEVTQISQ 120


>gi|326521704|dbj|BAK00428.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 476

 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 59/141 (41%), Positives = 84/141 (59%), Gaps = 2/141 (1%)

Query: 205 EKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEF 264
           +  +L LG+RRA++         L S   ++G LA   HA +T S F +F+NPR S SEF
Sbjct: 14  DDGELRLGVRRAVQLKNGSAFPALYSQCSNLGTLANVTHAVSTKSMFQIFYNPRLSQSEF 73

Query: 265 VIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVK 324
           ++P  K+ K++     SVG RF+M +E+E+++ RRY G ITG  D DP RW  S W+ + 
Sbjct: 74  IVPYWKFTKSISQP-FSVGWRFKMRYESEDAAERRYTGIITGTVDADP-RWRGSKWKCLL 131

Query: 325 VGWDESTAGERQPRVSLWEIE 345
           V WD+     R  R+S WEIE
Sbjct: 132 VRWDDDGEFRRPNRLSPWEIE 152


>gi|226498234|ref|NP_001142397.1| uncharacterized protein LOC100274571 [Zea mays]
 gi|194708626|gb|ACF88397.1| unknown [Zea mays]
          Length = 543

 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 56/114 (49%), Positives = 77/114 (67%), Gaps = 2/114 (1%)

Query: 251 FTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGISDL 310
           FTV++ PR SPSEF+IP  +Y+++V     S+GMRFRM FE EE+  +R+ GTI G  +L
Sbjct: 2   FTVYYKPRTSPSEFIIPYDQYMESV-KNNYSIGMRFRMRFEGEEAPEQRFTGTIVGCENL 60

Query: 311 DPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRP 364
           DP+ W +S WR +KV WDE +   R  RVS W+IEP ++ P+ P +   R KRP
Sbjct: 61  DPL-WPDSSWRYLKVRWDEPSTIPRPDRVSPWKIEPASSPPVNPLVHSSRAKRP 113



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 51/136 (37%), Positives = 78/136 (57%), Gaps = 8/136 (5%)

Query: 641 VSSMPLGDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRF 699
           +  +P G      +    +Q + +   ++    Q   TR+  KV+K G ++GRS+D+S+F
Sbjct: 390 IECLPEGSVSTAGTATENIQQAPQSSKDIQSKSQGASTRSCTKVHKQGVALGRSVDLSKF 449

Query: 700 SSYNELREELGQMFGIEGKFEDPLRSG---WQLVFVDRENDVLLLGDDPWEAFVSNVWYI 756
           + Y EL+ EL +MF  EG+    L SG   WQ+V+ D E D++L+GDDPWE F S V  I
Sbjct: 450 TDYGELQAELDKMFDFEGE----LVSGSQNWQIVYTDDEGDMMLVGDDPWEEFCSIVRKI 505

Query: 757 KILSPEDVQKMGEQGV 772
            I + E+VQKM  +  
Sbjct: 506 YIYTKEEVQKMNSKSA 521


>gi|293335341|ref|NP_001168636.1| uncharacterized protein LOC100382422 [Zea mays]
 gi|223949733|gb|ACN28950.1| unknown [Zea mays]
 gi|414868650|tpg|DAA47207.1| TPA: hypothetical protein ZEAMMB73_931024 [Zea mays]
          Length = 446

 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 113/368 (30%), Positives = 167/368 (45%), Gaps = 55/368 (14%)

Query: 2   IGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 61
           +GDN  ++ ++W ACA P   +PTVG  V YFP GH EQ           H+   P LP 
Sbjct: 13  VGDN-TVDRDVWLACAAPFSRIPTVGDEVYYFPDGHIEQ---------HQHLSAAP-LPA 61

Query: 62  Q--LICQLHNVTMHADVETDEVYAQMTLQPLSPEE---------QKDTFVPIELGIPSKQ 110
           Q    C + +V++  D +TDEV+A+++L+P                ++  P   G P K 
Sbjct: 62  QDRFHCTVTDVSLGVDDKTDEVFAKISLRPRPGRAAAPPPGPGGSSNSPAPAP-GPPQK- 119

Query: 111 PTNYFCKTLTASDTSTHGGFSVPRRAAEKVFP----SLDFSLQPPAQ--ELIARDLHDVE 164
              YF K L  S T  +  F +P    E V P      D + Q   Q  +++ RD     
Sbjct: 120 -LRYFTKDL--SQTDVYAKFRIPLEN-EHVLPIPKVETDGADQQRVQRQDVVMRDTRGKS 175

Query: 165 WKFRHIFRGQP-KRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVM 223
           W+F   +R  P K H L TGW  F  AKRL AGD ++F+      L++G+RR +  P   
Sbjct: 176 WRFSETYRVNPSKEHSLGTGWLDFAKAKRLAAGDKIVFMRRPNGDLIVGVRR-LHVPRYR 234

Query: 224 PSSVL--SSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVS 281
           P      + D M    LAAA         FTV + PR +  EF++P ++ V     T   
Sbjct: 235 PFDFQGPAQDVMEAVRLAAAGRP------FTVTYFPRQAAVEFIVPRSE-VDDALATSWE 287

Query: 282 VGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGW--DESTAGERQPRV 339
            G   RM  E  E   R++   + G   ++ +R   + WR +++ W  D   A  R   V
Sbjct: 288 PGAVVRM--EVMEDENRQHTVWVHG--RVNAIR--QNIWRMLEIIWGVDPPLATTRS--V 339

Query: 340 SLWEIEPL 347
           + W++  L
Sbjct: 340 NAWQVASL 347


>gi|407232674|gb|AFT82679.1| ARF32 ARF type transcription factor, partial [Zea mays subsp. mays]
 gi|414868651|tpg|DAA47208.1| TPA: hypothetical protein ZEAMMB73_035171 [Zea mays]
          Length = 418

 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 100/336 (29%), Positives = 151/336 (44%), Gaps = 33/336 (9%)

Query: 2   IGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPN-LP 60
           +GDN  ++ ++W ACA P   +PTVG  V YFP GH EQ           H+   P  LP
Sbjct: 54  VGDN-TVDRDVWLACAAPFSRIPTVGDEVDYFPDGHIEQ-----------HLSAAPQPLP 101

Query: 61  PQ--LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSK----QPTNY 114
            Q    C + +V++  D +TDEV+A+++L+P           P            Q   Y
Sbjct: 102 AQHRFHCTVTDVSLGVDDKTDEVFAKISLRPRPGRAAAPPPGPGGSSNSPAPSPPQKLRY 161

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKV-FPSLDFS-LQPPAQELIARDLHDVEWKFRHIFR 172
           F K L  S T  +  F +P      +  P +D   +Q   Q+++ RD     W+F   + 
Sbjct: 162 FTKEL--SQTDVYARFRIPLDNEHVLPIPMVDTDGVQ--RQDVVMRDTSGKSWRFSKTYS 217

Query: 173 GQP-KRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSD 231
             P K+H LTTGW  F  AKRL AGD ++F+      L++G+RR   P   +        
Sbjct: 218 VNPSKQHSLTTGWLDFAKAKRLAAGDKIVFMRRPNGDLIVGVRRLDVPRYPLFDFQGPDP 277

Query: 232 SMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFE 291
                 +  A   AA    FTV + PR +  EF++P ++ V     T    G   RM  E
Sbjct: 278 DQPAQDVMEAVRLAAAGRPFTVTYFPRQAAVEFIVPRSE-VDDALATSWEPGALVRM--E 334

Query: 292 TEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGW 327
             E   R+Y   + G   ++ +R   + WR +++ W
Sbjct: 335 VMEDENRQYTMWVVG--RVEAIR--QNIWRMLEIIW 366


>gi|212274925|ref|NP_001130477.1| uncharacterized protein LOC100191575 [Zea mays]
 gi|194689238|gb|ACF78703.1| unknown [Zea mays]
          Length = 430

 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 100/336 (29%), Positives = 151/336 (44%), Gaps = 33/336 (9%)

Query: 2   IGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPN-LP 60
           +GDN  ++ ++W ACA P   +PTVG  V YFP GH EQ           H+   P  LP
Sbjct: 54  VGDN-TVDRDVWLACAAPFSRIPTVGDEVDYFPDGHIEQ-----------HLSAAPQPLP 101

Query: 61  PQ--LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSK----QPTNY 114
            Q    C + +V++  D +TDEV+A+++L+P           P            Q   Y
Sbjct: 102 AQHRFHCTVTDVSLGVDDKTDEVFAKISLRPRPGRAAAPPPGPGGSSNSPAPSPPQKLRY 161

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKV-FPSLDFS-LQPPAQELIARDLHDVEWKFRHIFR 172
           F K L  S T  +  F +P      +  P +D   +Q   Q+++ RD     W+F   + 
Sbjct: 162 FTKEL--SQTDVYARFRIPLDNEHVLPIPMVDTDGVQ--RQDVVMRDTSGKSWRFSKTYS 217

Query: 173 GQP-KRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSD 231
             P K+H LTTGW  F  AKRL AGD ++F+      L++G+RR   P   +        
Sbjct: 218 VNPSKQHSLTTGWLDFAKAKRLAAGDKIVFMRRPNGDLIVGVRRLDVPRYPLFDFQGPDP 277

Query: 232 SMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFE 291
                 +  A   AA    FTV + PR +  EF++P ++ V     T    G   RM  E
Sbjct: 278 DQPAQDVMEAVRLAAAGRPFTVTYFPRQAAVEFIVPRSE-VDDALATSWEPGALVRM--E 334

Query: 292 TEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGW 327
             E   R+Y   + G   ++ +R   + WR +++ W
Sbjct: 335 VMEDENRQYTMWVVG--RVEAIR--QNIWRMLEIIW 366


>gi|302800377|ref|XP_002981946.1| hypothetical protein SELMODRAFT_115320 [Selaginella moellendorffii]
 gi|302802339|ref|XP_002982925.1| hypothetical protein SELMODRAFT_117335 [Selaginella moellendorffii]
 gi|300149515|gb|EFJ16170.1| hypothetical protein SELMODRAFT_117335 [Selaginella moellendorffii]
 gi|300150388|gb|EFJ17039.1| hypothetical protein SELMODRAFT_115320 [Selaginella moellendorffii]
          Length = 93

 Score =  112 bits (281), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 50/82 (60%), Positives = 69/82 (84%), Gaps = 2/82 (2%)

Query: 683 KVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLG 742
           +VYK GS+GR++D++RF +Y ELR EL +MFG++G+ +   R+GWQLVFVD+END+LL+G
Sbjct: 1   QVYKLGSIGRAVDVARFKNYVELRAELSRMFGLDGQLDQ--RNGWQLVFVDKENDLLLVG 58

Query: 743 DDPWEAFVSNVWYIKILSPEDV 764
           DDPWE FVS+V  I+ILSP +V
Sbjct: 59  DDPWEEFVSSVRGIRILSPSEV 80


>gi|357485553|ref|XP_003613064.1| Auxin response factor 3b [Medicago truncatula]
 gi|355514399|gb|AES96022.1| Auxin response factor 3b [Medicago truncatula]
          Length = 412

 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 54/122 (44%), Positives = 80/122 (65%), Gaps = 4/122 (3%)

Query: 223 MPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSV 282
           +PSSVLS+++M I  L  AA+     +   V + P A  SEFV+PL+KY  A+F +++S+
Sbjct: 37  LPSSVLSANNMPIDALVVAAN----RTLLPVVYYPGACVSEFVVPLSKYNNALFVSQLSI 92

Query: 283 GMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLW 342
           G+RF M+FET+       MGTI GISDLDP+ W +S W++++V WD+   G +  RV  W
Sbjct: 93  GLRFDMMFETKAFDTCCNMGTIVGISDLDPLMWPDSRWKNIEVKWDKPDCGGKPNRVCSW 152

Query: 343 EI 344
           +I
Sbjct: 153 DI 154


>gi|168053340|ref|XP_001779095.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162669547|gb|EDQ56132.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 825

 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 52/118 (44%), Positives = 76/118 (64%), Gaps = 2/118 (1%)

Query: 647 GDSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELR 706
           GD    +++     D   LL       Q   TR+++KVYK GS+ R++D++RF  Y ELR
Sbjct: 685 GDINLSSTVMNGAFDDPRLLQRAFLCPQPKITRSYIKVYKLGSITRAVDVNRFKDYTELR 744

Query: 707 EELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDV 764
            EL +MF ++G+ +  +  GWQLVF D E+D+LL+GDDPW+ FV NV  I+IL+P +V
Sbjct: 745 CELARMFNLDGQLDPTV--GWQLVFTDNEDDLLLVGDDPWDEFVRNVRGIRILTPAEV 800


>gi|302806463|ref|XP_002984981.1| hypothetical protein SELMODRAFT_424113 [Selaginella moellendorffii]
 gi|300147191|gb|EFJ13856.1| hypothetical protein SELMODRAFT_424113 [Selaginella moellendorffii]
          Length = 317

 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 60/124 (48%), Positives = 76/124 (61%), Gaps = 16/124 (12%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ 62
           GD K +N  LW  C GPL++LP +G++VVYFPQGH+EQV A+T KE D  IP        
Sbjct: 8   GDKKAINQALWLECPGPLITLPAIGSQVVYFPQGHTEQVVASTQKEADFDIP-------- 59

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
            I  L     HAD E DEV+AQMTLQP S  +  D F+  + GI +KQ    F +TLT+S
Sbjct: 60  -ISHL-----HADQENDEVFAQMTLQPFS--QTADPFLLPDFGIQTKQTIVSFSRTLTSS 111

Query: 123 DTST 126
             S+
Sbjct: 112 GESS 115


>gi|2708482|gb|AAB92475.1| IAA25 [Arabidopsis thaliana]
          Length = 476

 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 70/192 (36%), Positives = 105/192 (54%), Gaps = 13/192 (6%)

Query: 608 DSQNSVVFGVHIDSSGLLLPTTVSSFTTSVDPGVSSMPLGDSGFHNSMYGCMQDSSELLH 667
           DS+NS++ G ++D+    +P T+ S        + +M     G  N +   M  S+    
Sbjct: 272 DSRNSLLGGANVDNG--FVPDTLLSRGYDSQKDLQNMLSNYGGVTNDIGTEMSTSAVRTQ 329

Query: 668 NVGQIDQLTPTRTFVKVYKSGSVGRSL---------DISRFSSYNELREELGQMFGIEGK 718
           + G +  +      + V  +G +G  L         D++R+  Y+ELR +L +MFGIEG+
Sbjct: 330 SFG-VPNVPAISNDLAVNDAGVLGGGLWPAQTQRMRDVNRYRGYDELRHDLARMFGIEGQ 388

Query: 719 FEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPS 778
            EDP  S W+LV+VD END+LL+GDDPWE FV+ V  IKILS  +VQ+M   G  +  P 
Sbjct: 389 LEDPQTSDWKLVYVDHENDILLVGDDPWEEFVNCVQSIKILSSAEVQQMSLDGNFAGVPV 448

Query: 779 SGQRANSRGNCG 790
           + Q A S G+ G
Sbjct: 449 TNQ-ACSGGDSG 459


>gi|414584846|tpg|DAA35417.1| TPA: hypothetical protein ZEAMMB73_535909 [Zea mays]
          Length = 67

 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 49/60 (81%), Positives = 56/60 (93%)

Query: 712 MFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 771
           MFGI+G+ +DP RSGWQLVFVDRENDVLLLGDDPWE+FV++VWYIKILSPEDV KMG+ G
Sbjct: 1   MFGIKGQLDDPDRSGWQLVFVDRENDVLLLGDDPWESFVNSVWYIKILSPEDVHKMGKPG 60


>gi|168059962|ref|XP_001781968.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162666541|gb|EDQ53192.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 139

 Score =  107 bits (268), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 53/104 (50%), Positives = 72/104 (69%), Gaps = 2/104 (1%)

Query: 661 DSSELLHNVGQIDQLTPTRTFVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFE 720
           D   LL       Q   TR+++KVYK GS+ R++D++RF  Y ELR EL +MF ++G+  
Sbjct: 13  DDPTLLQRAFTGPQPKITRSYIKVYKLGSITRAVDVNRFKDYTELRCELARMFNLDGQL- 71

Query: 721 DPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDV 764
           DP + GWQLVF D E+D+LL+GDDPWE FV NV  I+IL+P +V
Sbjct: 72  DP-KVGWQLVFTDNEDDLLLVGDDPWEEFVRNVRGIRILTPAEV 114


>gi|302759398|ref|XP_002963122.1| hypothetical protein SELMODRAFT_438333 [Selaginella moellendorffii]
 gi|300169983|gb|EFJ36585.1| hypothetical protein SELMODRAFT_438333 [Selaginella moellendorffii]
          Length = 289

 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 60/137 (43%), Positives = 81/137 (59%), Gaps = 17/137 (12%)

Query: 642 SSMP-LGDSGFHNSMYGCMQDSSELLHNV-------------GQIDQLTPTRTFVKVYKS 687
           SSMP LGD G  +S            H                   Q+ P R++ KV K 
Sbjct: 132 SSMPALGDGGATSSRQSLYSSQGRAAHGARGDHHDQNAQRVSSSFKQMKP-RSYTKVLKL 190

Query: 688 GSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWE 747
           GS+GRSL+I+RF+SY ELR EL +MFG+EG+ +    S WQLV++D + D+LL+GDD WE
Sbjct: 191 GSIGRSLNIARFNSYAELRSELARMFGLEGQLDQS--SHWQLVYMDNDGDILLVGDDRWE 248

Query: 748 AFVSNVWYIKILSPEDV 764
            FVS+V  I+I+SP +V
Sbjct: 249 EFVSSVRGIRIISPSEV 265


>gi|302796880|ref|XP_002980201.1| hypothetical protein SELMODRAFT_444454 [Selaginella moellendorffii]
 gi|300151817|gb|EFJ18461.1| hypothetical protein SELMODRAFT_444454 [Selaginella moellendorffii]
          Length = 289

 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 59/137 (43%), Positives = 81/137 (59%), Gaps = 17/137 (12%)

Query: 642 SSMP-LGDSGFHNSMYGCMQDSSELLHNV-------------GQIDQLTPTRTFVKVYKS 687
           SSMP LGD G  +S            H                   Q+ P R++ KV K 
Sbjct: 132 SSMPALGDGGATSSRQSLYSSQGRAAHGARGDHHDQNAQRVSSSFKQMKP-RSYTKVLKL 190

Query: 688 GSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWE 747
           GS+GRSL+I+RF+SY ELR EL +MFG+EG+ +    S WQLV++D + D+LL+GDD WE
Sbjct: 191 GSIGRSLNIARFNSYAELRSELARMFGLEGQLDQS--SHWQLVYMDNDGDILLVGDDRWE 248

Query: 748 AFVSNVWYIKILSPEDV 764
            FV++V  I+I+SP +V
Sbjct: 249 EFVTSVRGIRIISPSEV 265


>gi|326499245|dbj|BAK06113.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 467

 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 54/112 (48%), Positives = 74/112 (66%), Gaps = 3/112 (2%)

Query: 235 IGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEE 294
            G+LA+A+HA  TNS F V++ PR S S++++ + KY  A   T  +VGMRFRM FE E+
Sbjct: 1   FGVLASASHAIKTNSIFVVYYRPRLSQSQYIVSVNKYHLAS-KTGFTVGMRFRMNFEAED 59

Query: 295 SSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQP-RVSLWEIE 345
             V+++ GTI G  D  P +WS S W+S+KV WD+S A    P RVS WEI+
Sbjct: 60  VPVKKFFGTIVGDGDFSP-QWSGSEWKSLKVQWDDSVAICNGPERVSPWEID 110



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 56/117 (47%), Gaps = 8/117 (6%)

Query: 671 QIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQL 729
           Q  Q +  R  VKV   G +VGR++D++    Y  L  EL QMF I+      ++  +++
Sbjct: 355 QSQQSSIGRNRVKVQMHGNAVGRAVDLASLDGYERLTNELEQMFEIKD-----IKQNFKV 409

Query: 730 VFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESF--SPSSGQRAN 784
            F D E D + +GDDPW  F   V  I I   ED + M       F  +P    +AN
Sbjct: 410 AFNDNEGDTMKVGDDPWMEFCRMVRKIVIYPIEDDKNMDPHQTSVFAAAPDEDLKAN 466


>gi|218199196|gb|EEC81623.1| hypothetical protein OsI_25146 [Oryza sativa Indica Group]
          Length = 796

 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 95/350 (27%), Positives = 150/350 (42%), Gaps = 80/350 (22%)

Query: 8   LNSELWHACAGPLVS-LPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQ---- 62
           +  E+W ACA P    LP VG+ V YFP GH++Q                P+ PP+    
Sbjct: 404 ITREMWRACAAPKSGRLPAVGSFVYYFPDGHAQQC---------------PSRPPEPLPG 448

Query: 63  --LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNY---FCK 117
              +C++  V +  D   +E++A M+L P++ ++      P + G  S Q       F K
Sbjct: 449 RVFLCKVTAVRL--DATRNELFATMSLIPVARDQAIQPQAPADPGPSSPQVKTTLVSFVK 506

Query: 118 TLTASD-TSTHGGFSVPRR-AAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQP 175
            LT +D       F VP+R AA  V P L  +   P   L  +D+H  EW   + ++   
Sbjct: 507 PLTCTDAVKNRYRFIVPKREAAMGVLPQLQLNEHVP---LYIKDMHGKEWVINYTWKEY- 562

Query: 176 KRHLLTTGWSVFVSAKRLVAGDSVLFIWN-EKNQLLLGIRRAIRPPTVMPSSVLSSDSMH 234
             H+L++GW  F +A RLV GD+V+F+ + +  +  +G+RR ++P  V    V+      
Sbjct: 563 -THMLSSGWIKFANANRLVTGDNVVFMRSMDSGERYMGLRRTLKPEPVSVDEVIE----- 616

Query: 235 IGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEE 294
                 A   AA    F V +  R    EFV+PL            +VG +         
Sbjct: 617 ------AVWRAARLEPFEVAYLSRQDGDEFVVPLP-----------NVGPQ--------- 650

Query: 295 SSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEI 344
                  G +  I +     ++ S WR ++V W       R   V+ W+I
Sbjct: 651 -------GKVIAIEN-----YATSIWRMIQVEWPSCAGMNRY--VNFWQI 686



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 101/357 (28%), Positives = 151/357 (42%), Gaps = 44/357 (12%)

Query: 8   LNSELWHACAGPLVS-LPTVGTRVVYFPQGHSEQVAATTNKEVDS-HIPNYPNLPPQLIC 65
           ++  +W ACA P    LP VG+ V YF  GH+EQ        ++   +P     P   +C
Sbjct: 16  VDRAMWLACAAPNSGRLPAVGSMVFYFVDGHAEQFCQFPAPLLEQLAVPG----PRVFLC 71

Query: 66  QLHNVTMHADVETDEVYAQMTLQPLSPEE---QKDTFVPIELGIPSKQPTNYFCKTLTAS 122
            +  V + AD  T+E YA +TL P++  +         P       +Q   YF KTL +S
Sbjct: 72  TVAAVRLRADALTNEAYADITLDPVADHDVPRLLPAPAPAAAAGGQQQQLRYFVKTLMSS 131

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           D      F+VP   A+ VFP L  +     Q LI +DL      F +   G   R  L  
Sbjct: 132 DAEYRDRFAVPMDVAKDVFPPLVDAKA--VQPLIVKDLQGSPMTFDYGRNGN--RVTLAK 187

Query: 183 GWSVFVSAKRLVAGDSVLFI-WNEKNQLLLGIR-----------RAIRPPTVMPSSVLSS 230
            W  F      V GDSV+F+   + ++L +G+R           R  RPPT +P +V   
Sbjct: 188 VWKKFRDDMDFVDGDSVIFMRRRDDDELYVGVRRQRTLDKPLRTRRSRPPTPLPVAVQE- 246

Query: 231 DSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAV-FHTRVSVGMRFRML 289
                  + AAA  AA    FT  +  R    EFV+P     + +   +R +  M    +
Sbjct: 247 -------VIAAAGRAAAGEQFTATYRSRQDGDEFVVPREVVEEGLRLRSRFTPEMEVEFV 299

Query: 290 FETEESSVRRY--MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEI 344
           +  E+ +       G IT I D      +   WRSV++GW  +   E     + W++
Sbjct: 300 WALEDGAPPSVGPHGKITAIHD------TTWMWRSVEIGW--TGGSEMNKYANFWQV 348


>gi|222629830|gb|EEE61962.1| hypothetical protein OsJ_16730 [Oryza sativa Japonica Group]
          Length = 496

 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 98/351 (27%), Positives = 143/351 (40%), Gaps = 55/351 (15%)

Query: 12  LWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNVT 71
           +W ACA PL  +P VGT+V YFP+GH+EQ  A     +       P+     +C +  V 
Sbjct: 28  VWLACAAPLSRIPVVGTQVSYFPEGHAEQCPAPLPDPL-------PSAHRFFLCTITAVD 80

Query: 72  MHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPS----KQPTNYFCKTLTASDTSTH 127
           + AD  T E YA ++L PL  +       P            Q   Y+ K LT SD +  
Sbjct: 81  LSADTTTGEPYATISLLPLRHDAPAPAPAPAPAAAELAEAESQEFRYYAKQLTQSDANNG 140

Query: 128 GGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVF 187
           GGFSVPR  A+ +FP+L+    PP  E                  G P   L+     + 
Sbjct: 141 GGFSVPRLCADHIFPALNLDDDPPRPE---------------PHHGGPAGRLVGIPPHLP 185

Query: 188 VSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAAT 247
             A    A D V  +   +     G      P  VM                 A   AA 
Sbjct: 186 RHAAPAPADDRVEQVRERQAAGGRGHGGVHVPQEVM----------------EAVRLAAE 229

Query: 248 NSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRM-LFETEESSVRRYM-GTIT 305
            + F V + PR    EFV+P  +  K +  T    GM+ R  + E E++    ++ GT+T
Sbjct: 230 QAAFRVTYYPRHGAGEFVVPRVEVDKGLT-TPWRCGMQVRAQVMEAEDTRRLAWLNGTLT 288

Query: 306 GISDLDPVRWSNSHWRSVKVGWDESTAGE--RQPRVSLWEIEPLTTFPMYP 354
            +            WR+++V WD S A    +   V+ W+++P+  FP  P
Sbjct: 289 NLR-------HQQIWRTLEVEWDASAASSSMKNRFVNPWQVQPV-DFPPLP 331


>gi|62865708|gb|AAY17048.1| p-167-1_1 [Pinus resinosa]
          Length = 97

 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 47/70 (67%), Positives = 56/70 (80%)

Query: 716 EGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESF 775
           EG+ EDPLRSGWQLVFVD+E D LLLGDDPWE FV+NVW+IKILSP +VQ+M ++G+E  
Sbjct: 1   EGQLEDPLRSGWQLVFVDKEKDALLLGDDPWEEFVNNVWFIKILSPPEVQQMTQEGLELL 60

Query: 776 SPSSGQRANS 785
           S    QR  S
Sbjct: 61  SSFPTQRQAS 70


>gi|224286963|gb|ACN41183.1| unknown [Picea sitchensis]
          Length = 450

 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 54/112 (48%), Positives = 75/112 (66%), Gaps = 5/112 (4%)

Query: 660 QDSSELLHNVGQIDQLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGK 718
           Q SS+  HN  Q +    TR+  KV+K GS +GR++D+++F  Y EL  EL QMF IEG+
Sbjct: 303 QKSSKETHNRPQSNS---TRSCTKVHKQGSALGRAVDLTKFEGYTELIRELEQMFNIEGE 359

Query: 719 FEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQ 770
            EDP + GWQ+V+ D E D++L+GDDPW+ F S V  I I + E+V+KM  Q
Sbjct: 360 LEDPNK-GWQVVYTDNEGDMMLVGDDPWQEFCSIVRKIYIYTREEVEKMTPQ 410


>gi|158513351|sp|A3BH85.1|ARFT_ORYSJ RecName: Full=Putative auxin response factor 20
          Length = 728

 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 99/352 (28%), Positives = 155/352 (44%), Gaps = 58/352 (16%)

Query: 8   LNSELWHACAGPLVS-LPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
           ++ ++WHACA P    LP VGT V Y P GH EQ A      + S +P+ P  P  + C 
Sbjct: 19  IDRDVWHACAVPYSGVLPGVGTLVYYIPHGHIEQCAEDPALLL-SRLPD-PIHP--VPCT 74

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 126
           + ++ +  D E+ E YA ++L P S     DT    ++    +    +F K L+ +D ++
Sbjct: 75  VADLVLDVDAESGEAYATISLLPGS---HDDTTARRQVPAHGEPGFRFFEKQLSPADVTS 131

Query: 127 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL------ 180
           +    +P   AE V P LD +    A+    RDL    ++F HI+  +  R++L      
Sbjct: 132 N-ALVLP-AGAEHVLPPLDIAAYQTARLFDVRDLRGKRFEFVHIWDKKRCRYMLGDLGVN 189

Query: 181 -TTGWSVFVSAKRLVAGDSVLFIWN------EKNQLLLGIRRAIRP-------PTVMPSS 226
              GW  FV AKRL   D+V+F+           +LL+G+RRA R        P V  + 
Sbjct: 190 DNDGWRGFVKAKRLATRDTVVFMRRGGGDGDGDGELLVGVRRAPRARGGHHPRPGVEDNK 249

Query: 227 VLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFH------TRV 280
           V+S   +          A    + F V + PR    EFV+   +Y+   F          
Sbjct: 250 VVSEVWL----------AMQGVTPFEVTYYPREGTFEFVVSRDEYIGFSFSPFYPFVPGT 299

Query: 281 SVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTA 332
           +V +R   L   +  S     GT+     L P       WR ++V WD++ +
Sbjct: 300 TVHLRMNPLQIAQSIS-----GTVRTFDHLRP-------WRMLEVDWDQAAS 339



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 76/292 (26%), Positives = 126/292 (43%), Gaps = 49/292 (16%)

Query: 76  VETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTN------YFCKTLTASDTSTHGG 129
           V +D+ YA ++L P       D +V       ++ P        +F K L+ SD + +GG
Sbjct: 397 VPSDDSYAMISLFP------GDCYVTHRPLPAARDPVGGQREFCFFDKKLSPSDAAANGG 450

Query: 130 -----FSVPR-RAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRG-----QPKRH 178
                F +P+  AAE V P +         +L   +L    W+F H +       +   H
Sbjct: 451 GSGALFVIPKPSAAEHVLPRI--------PDLRVTNLQGGRWEFGHTWSDADTDRRSSSH 502

Query: 179 LLTTGWSVFVSAKRLVAGDSVLFIWNEK-NQLLLGIRRAIRPPTVMPSSVLSSDSMHIGL 237
            L  GWS FV AKRL  GD+V+F+      + L+G+RR  +P   MP  +         L
Sbjct: 503 TLAAGWSAFVKAKRLCVGDTVIFMRRRPGGEPLVGVRR--KPHGGMPVGIPDKHVADAWL 560

Query: 238 LAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSV 297
            A++A        F V + P    +EFV+   +  +      ++ G R R+L   +++  
Sbjct: 561 DASSAQP------FRVTYCPWQGTAEFVV---RREEVEGSPPLAPGTRVRLLMNPDDARR 611

Query: 298 RRYMGTITGISDLDPVRWSNSHWRSVKVGWDEST--AGERQPRVSLWEIEPL 347
           R        + D+       S WR ++V WD  +  A     RV+ W+++P+
Sbjct: 612 RSQPPVYGTVRDVH----CRSEWRMLEVDWDRDSPLAPTMNRRVNSWQVQPV 659


>gi|25553609|dbj|BAC24869.1| auxin response factor-like protein [Oryza sativa Japonica Group]
 gi|50509188|dbj|BAD30342.1| auxin response factor-like protein [Oryza sativa Japonica Group]
 gi|222636556|gb|EEE66688.1| hypothetical protein OsJ_23343 [Oryza sativa Japonica Group]
          Length = 752

 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 99/352 (28%), Positives = 155/352 (44%), Gaps = 58/352 (16%)

Query: 8   LNSELWHACAGPLVS-LPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
           ++ ++WHACA P    LP VGT V Y P GH EQ A      + S +P+ P  P  + C 
Sbjct: 19  IDRDVWHACAVPYSGVLPGVGTLVYYIPHGHIEQCAEDPALLL-SRLPD-PIHP--VPCT 74

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 126
           + ++ +  D E+ E YA ++L P S     DT    ++    +    +F K L+ +D ++
Sbjct: 75  VADLVLDVDAESGEAYATISLLPGS---HDDTTARRQVPAHGEPGFRFFEKQLSPADVTS 131

Query: 127 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL------ 180
           +    +P   AE V P LD +    A+    RDL    ++F HI+  +  R++L      
Sbjct: 132 N-ALVLP-AGAEHVLPPLDIAAYQTARLFDVRDLRGKRFEFVHIWDKKRCRYMLGDLGVN 189

Query: 181 -TTGWSVFVSAKRLVAGDSVLFIWN------EKNQLLLGIRRAIRP-------PTVMPSS 226
              GW  FV AKRL   D+V+F+           +LL+G+RRA R        P V  + 
Sbjct: 190 DNDGWRGFVKAKRLATRDTVVFMRRGGGDGDGDGELLVGVRRAPRARGGHHPRPGVEDNK 249

Query: 227 VLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFH------TRV 280
           V+S   +          A    + F V + PR    EFV+   +Y+   F          
Sbjct: 250 VVSEVWL----------AMQGVTPFEVTYYPREGTFEFVVSRDEYIGFSFSPFYPFVPGT 299

Query: 281 SVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTA 332
           +V +R   L   +  S     GT+     L P       WR ++V WD++ +
Sbjct: 300 TVHLRMNPLQIAQSIS-----GTVRTFDHLRP-------WRMLEVDWDQAAS 339



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 125/290 (43%), Gaps = 49/290 (16%)

Query: 78  TDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTN------YFCKTLTASDTSTHGG-- 129
           +D+ YA ++L P       D +V       ++ P        +F K L+ SD + +GG  
Sbjct: 423 SDDSYAMISLFP------GDCYVTHRPLPAARDPVGGQREFCFFDKKLSPSDAAANGGGS 476

Query: 130 ---FSVPR-RAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRG-----QPKRHLL 180
              F +P+  AAE V P +         +L   +L    W+F H +       +   H L
Sbjct: 477 GALFVIPKPSAAEHVLPRI--------PDLRVTNLQGGRWEFGHTWSDADTDRRSSSHTL 528

Query: 181 TTGWSVFVSAKRLVAGDSVLFIWNEK-NQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLA 239
             GWS FV AKRL  GD+V+F+      + L+G+RR  +P   MP  +         L A
Sbjct: 529 AAGWSAFVKAKRLCVGDTVIFMRRRPGGEPLVGVRR--KPHGGMPVGIPDKHVADAWLDA 586

Query: 240 AAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRR 299
           ++A        F V + P    +EFV+   +  +      ++ G R R+L   +++  R 
Sbjct: 587 SSAQP------FRVTYCPWQGTAEFVV---RREEVEGSPPLAPGTRVRLLMNPDDARRRS 637

Query: 300 YMGTITGISDLDPVRWSNSHWRSVKVGWDEST--AGERQPRVSLWEIEPL 347
                  + D+       S WR ++V WD  +  A     RV+ W+++P+
Sbjct: 638 QPPVYGTVRDVH----CRSEWRMLEVDWDRDSPLAPTMNRRVNSWQVQPV 683


>gi|75152495|sp|Q8H506.1|Y7833_ORYSJ RecName: Full=B3 domain-containing protein
           Os07g0183300/Os07g0183600
 gi|25553611|dbj|BAC24871.1| putative auxin response factor 6a [Oryza sativa Japonica Group]
 gi|50509190|dbj|BAD30344.1| putative auxin response factor 6a [Oryza sativa Japonica Group]
          Length = 762

 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 101/357 (28%), Positives = 151/357 (42%), Gaps = 44/357 (12%)

Query: 8   LNSELWHACAGPLVS-LPTVGTRVVYFPQGHSEQVAATTNKEVDS-HIPNYPNLPPQLIC 65
           ++  +W ACA P    LP VG+ V YF  GH+EQ        ++   +P     P   +C
Sbjct: 16  VDRAMWLACAAPNSGRLPAVGSMVFYFVDGHAEQFCQFPAPLLEQLAVPG----PRVFLC 71

Query: 66  QLHNVTMHADVETDEVYAQMTLQPLSPEE---QKDTFVPIELGIPSKQPTNYFCKTLTAS 122
            +  V + AD  T+E YA +TL P++  +         P       +Q   YF KTL +S
Sbjct: 72  TVAAVRLRADALTNEAYADITLDPVADHDVPRLLPAPAPAAAAGGQQQQLRYFVKTLMSS 131

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
           D      F+VP   A+ VFP L  +     Q LI +DL      F +   G   R  L  
Sbjct: 132 DAEYRDRFAVPMDVAKDVFPPLVDAKA--VQPLIVKDLQGSPMTFDYGRNGN--RVTLAK 187

Query: 183 GWSVFVSAKRLVAGDSVLFI-WNEKNQLLLGIR-----------RAIRPPTVMPSSVLSS 230
            W  F      V GDSV+F+   + ++L +G+R           R  RPPT +P +V   
Sbjct: 188 VWKKFRDDMDFVDGDSVIFMRRRDDDELYVGVRRQRTLDKPLRTRRSRPPTPLPVAVQE- 246

Query: 231 DSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAV-FHTRVSVGMRFRML 289
                  + AAA  AA    FT  +  R    EFV+P     + +   +R +  M    +
Sbjct: 247 -------VIAAAGRAAAGEQFTATYRSRQDGDEFVVPREVVEEGLRLRSRFTPEMEVEFV 299

Query: 290 FETEESSVRRY--MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEI 344
           +  E+ +       G IT I D      +   WRSV++GW  +   E     + W++
Sbjct: 300 WALEDGAPPSVGPHGKITAIHD------TTWMWRSVEIGW--TGGSEMNKYANFWQV 348



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 79/302 (26%), Positives = 132/302 (43%), Gaps = 40/302 (13%)

Query: 57  PNLPPQ------LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQ 110
           P+ PP+       +C++  V +  D   +E++A M+L P++ ++      P + G  S Q
Sbjct: 377 PSRPPEPLPGRVFLCKVTAVRL--DATRNELFATMSLIPVARDQAIQPQAPADPGPSSPQ 434

Query: 111 PTNY---FCKTLTASD-TSTHGGFSVPRR-AAEKVFPSLDFSLQPPAQELIARDLHDVEW 165
                  F K LT +D       F VP+R  A  V P L  +   P   L  +D+H  EW
Sbjct: 435 VQTTLVSFVKPLTCTDAVKNRYRFIVPKRETAMGVLPQLQLNEHVP---LYIKDMHGKEW 491

Query: 166 KFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWN-EKNQLLLGIRRAIRPPTVMP 224
              + ++     H+L++GW  F +A RLV GD+V+F+ + +  +  +G+RR ++P  V  
Sbjct: 492 VINYTWKEY--THMLSSGWIKFANANRLVTGDNVVFMRSMDSGERYMGLRRTLKPEPVSV 549

Query: 225 SSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGM 284
             V+            A   AA    F V +  R    EFV+P    V      + + GM
Sbjct: 550 DEVIE-----------AVWRAARLEPFEVTYLSRQDGDEFVVP-CGIVHNALRAKFTPGM 597

Query: 285 RFRMLFETEESSVRRY--MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLW 342
               ++  EE  +      G +  I +     ++ S WR ++V W       R   V+ W
Sbjct: 598 VVNFVWAVEEDRLPNVGPQGKVIAIEN-----YATSIWRMIQVEWPSCAGMNRY--VNFW 650

Query: 343 EI 344
           +I
Sbjct: 651 QI 652


>gi|115470909|ref|NP_001059053.1| Os07g0183200 [Oryza sativa Japonica Group]
 gi|75152496|sp|Q8H507.1|Y7832_ORYSJ RecName: Full=B3 domain-containing protein Os07g0183200
 gi|25553610|dbj|BAC24870.1| putative auxin response factor 6a [Oryza sativa Japonica Group]
 gi|50509189|dbj|BAD30343.1| putative auxin response factor 6a [Oryza sativa Japonica Group]
 gi|113610589|dbj|BAF20967.1| Os07g0183200 [Oryza sativa Japonica Group]
          Length = 407

 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 112/408 (27%), Positives = 174/408 (42%), Gaps = 64/408 (15%)

Query: 5   NKCLNSELWHACAGPLVS-LPTVGTRVVYFPQGHSEQVAATTNKEVDS-HIPNYPNLPPQ 62
           +  ++ ++W ACA P    LP VG+ V YF  GH+ Q        ++   +P     P  
Sbjct: 13  DGIVDRDMWLACAAPNSGRLPAVGSVVFYFVDGHAAQFCQFPAPLLEQLAVPG----PRV 68

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVP--------IELGIPSKQPTNY 114
            +C +  V + AD  T+E YA++TL P++     D  VP                Q   Y
Sbjct: 69  FLCTVAAVRLRADALTNEAYAEITLDPVA-----DHDVPRLAPAPAPAPAAAAGGQQLRY 123

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F KTL  SD      FS P   A+ VFP L  +     Q L+ +DLH     F +  +G 
Sbjct: 124 FVKTLMISDFDFRIRFSAPMADAKGVFPPLVDAKA--VQPLLVKDLHGSPMTFDYGRKG- 180

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLFI-----WNEKNQLLLGIR-------------RA 216
            KR  L   W  F      V GDSV+F+      ++  +L +G+R             R 
Sbjct: 181 -KRVTLAKVWKKFRDDMDFVDGDSVIFMRRRDDDDDDGELYVGVRRQRTLERPLRNTMRR 239

Query: 217 IRPPTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVF 276
            RPPT   ++V  +       + AAA  AA    FTV +  R    EFV+P  + V+   
Sbjct: 240 YRPPTPPQAAVQEA-------VLAAAGHAAAGERFTVAYRSRKDGDEFVVP-REAVEEGL 291

Query: 277 HTRVSVGMRFRMLFETEESS--VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGE 334
             R++       ++  E+ +  +    G +T I+       +   WR++++ WD ++  E
Sbjct: 292 RARLTSLAEVEFVWAVEDGAPPIVGPRGKVTAIA-------TGQLWRNLEIVWDGNS--E 342

Query: 335 RQPRVSLWEIEPLTTFPMYPSL-FPLRLKRPWHPSTSSFN---DNRDE 378
                + W++ P+    + PS   P RLK      T+S +   DN DE
Sbjct: 343 MDMSANFWQVRPVEEVDISPSTPPPKRLKNCEIDDTASTSVSVDNGDE 390


>gi|125557468|gb|EAZ03004.1| hypothetical protein OsI_25145 [Oryza sativa Indica Group]
          Length = 407

 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 112/408 (27%), Positives = 173/408 (42%), Gaps = 64/408 (15%)

Query: 5   NKCLNSELWHACAGPLVS-LPTVGTRVVYFPQGHSEQVAATTNKEVDS-HIPNYPNLPPQ 62
           +  ++  +W ACA P    LP VG+ V YF  GH+ Q        ++   +P     P  
Sbjct: 13  DGIVDRAMWLACAAPNSGRLPAVGSVVFYFVDGHAAQFCQFPAPLLEQLAVPG----PRV 68

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVP--------IELGIPSKQPTNY 114
            +C +  V + AD  T+E YA++TL P++     D  VP                Q   Y
Sbjct: 69  FLCTVAAVRLRADALTNEAYAEITLDPVA-----DHDVPRLAPAPAPAPAAAAGGQQLRY 123

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F KTL  SD      FS P   A+ VFP L  +     Q L+ +DLH     F +  +G 
Sbjct: 124 FVKTLMISDFDFRIRFSAPMADAKGVFPPLVDAKA--VQPLLVKDLHGSPMTFDYGRKG- 180

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLFI-----WNEKNQLLLGIR-------------RA 216
            KR  L   W  F      V GDSV+F+      ++  +L +G+R             R 
Sbjct: 181 -KRVTLAKVWKKFRDDMDFVDGDSVIFMRRRDDDDDDGELYVGVRRQRTLERPLRNTMRR 239

Query: 217 IRPPTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVF 276
            RPPT   ++V  +       + AAA  AA    FTV +  R    EFV+P  + V+   
Sbjct: 240 YRPPTPPQAAVQEA-------VLAAAGHAAAGERFTVAYRSRQDGDEFVVP-REAVEEGL 291

Query: 277 HTRVSVGMRFRMLFETEESS--VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGE 334
             R++       ++  E+ +  +    G +T I+       +   WR++++ WD ++  E
Sbjct: 292 RARLTSLAEVEFVWAVEDGAPPIVGPRGKVTAIA-------TGQLWRNLEIVWDGNS--E 342

Query: 335 RQPRVSLWEIEPLTTFPMYPSL-FPLRLKRPWHPSTSSFN---DNRDE 378
                + W++ P+    + PS   P RLK      T+S +   DN DE
Sbjct: 343 MDMSANFWQVRPVEEVDISPSTPPPKRLKNCEIDDTASTSVSVDNGDE 390


>gi|357472329|ref|XP_003606449.1| Auxin response factor [Medicago truncatula]
 gi|355507504|gb|AES88646.1| Auxin response factor [Medicago truncatula]
          Length = 361

 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 44/95 (46%), Positives = 65/95 (68%), Gaps = 2/95 (2%)

Query: 674 QLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFV 732
           Q T  R+  KV+K GS VGR++D+SR S YN+L  EL ++FG+EG   D  + GW++++ 
Sbjct: 227 QNTAKRSCTKVHKQGSLVGRAIDLSRLSGYNDLLSELEKLFGMEGLLRDSDK-GWRILYT 285

Query: 733 DRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           D END++++GDDPW  F   V  I I + E+V+KM
Sbjct: 286 DSENDIMVVGDDPWHEFCDVVSKIHIYTKEEVEKM 320


>gi|413946060|gb|AFW78709.1| hypothetical protein ZEAMMB73_248195 [Zea mays]
          Length = 429

 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 44/109 (40%), Positives = 70/109 (64%), Gaps = 2/109 (1%)

Query: 237 LLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS 296
           +L+A A++    S F + FNPR   SEF++P  K++K++ +   SVG RF++  E E+++
Sbjct: 1   MLSAVANSLDNRSIFHICFNPRVGASEFIVPYCKFLKSL-NYHFSVGTRFKVGCENEDAN 59

Query: 297 VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIE 345
            R + G I GIS++DP+ W  S W+S+ + WD +T    Q RVS W+IE
Sbjct: 60  ERSF-GLIIGISEVDPIHWPGSKWKSLLIKWDGATKYSHQNRVSPWDIE 107


>gi|168061668|ref|XP_001782809.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162665711|gb|EDQ52386.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 100

 Score = 93.2 bits (230), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 41/80 (51%), Positives = 57/80 (71%), Gaps = 1/80 (1%)

Query: 684 VYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGD 743
           VY+ G VGR++D+ +  SY+ LR  L  +F ++G+ +D +  GWQLV+ D ENDVLL+GD
Sbjct: 1   VYQQGKVGRTIDLRKCESYDGLRRVLANLFNLQGQLDD-VTKGWQLVYTDHENDVLLVGD 59

Query: 744 DPWEAFVSNVWYIKILSPED 763
           DPWE F   V  +KILSP+D
Sbjct: 60  DPWEEFCGCVRSLKILSPQD 79


>gi|218199195|gb|EEC81622.1| hypothetical protein OsI_25144 [Oryza sativa Indica Group]
          Length = 722

 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 98/359 (27%), Positives = 156/359 (43%), Gaps = 65/359 (18%)

Query: 8   LNSELWHACAGPLVS-LPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
           ++ ++WHACA P    LP VGT V Y P GH EQ A      + S +P+ P  P  + C 
Sbjct: 19  IDRDVWHACAVPYSGVLPGVGTLVYYIPHGHIEQCAEDPALLL-SRLPD-PIHP--VPCT 74

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTST 126
           + ++ +  D E+ E YA ++L P S     DT    ++    +    +F K L+ +D ++
Sbjct: 75  VADLVLDVDAESGEAYATISLLPGS---HDDTTARRQVPAHGEPGFRFFEKQLSPADVTS 131

Query: 127 HGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRH-----IFRGQPKRHLL- 180
           +    +P   AE V P LD +    A+    RDL    ++F H     I+  +  R++L 
Sbjct: 132 N-ALVLP-AGAEHVLPPLDIAAYQTARLFDVRDLRGKRFEFVHIWDKNIWDKKRCRYMLG 189

Query: 181 ------TTGWSVFVSAKRLVAGDSVLFIWN--------EKNQLLLGIRRAIRP------- 219
                   GW  FV AKRL   D+V+F+             +LL+G+RRA R        
Sbjct: 190 DLGVNDNDGWRGFVKAKRLATRDTVVFMRRGGGGGDGDGDGELLVGVRRAPRARGGHHPR 249

Query: 220 PTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFH-- 277
           P V  + V+S   + +  +          + F V + PR    EFV+   +Y+   F   
Sbjct: 250 PGVEDNKVVSEVWLEMQGV----------TPFEVTYYPREGTFEFVVSRDEYIGFSFSPF 299

Query: 278 ----TRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTA 332
                  +V +R   L   +  S     GT+     L P       WR ++V WD++ +
Sbjct: 300 YPFVPGTTVHLRMNPLQIAQSIS-----GTVRTFDHLRP-------WRMLEVDWDQAAS 346



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 73/292 (25%), Positives = 116/292 (39%), Gaps = 62/292 (21%)

Query: 76  VETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTN------YFCKTLTASDTSTHGG 129
           V +D+ YA ++L P       D +V       ++ P        +F K L+ SD + +GG
Sbjct: 404 VPSDDSYAMISLFP------GDCYVTHRPLPAARDPVGGQREFCFFDKKLSPSDAAANGG 457

Query: 130 -----FSVPR-RAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRG-----QPKRH 178
                F +P+  AAE V P +         +L   +L    W+F H +       +   H
Sbjct: 458 GSGALFVIPKPSAAEHVLPRI--------PDLRVTNLQGGRWEFGHTWSDADTDRRSSSH 509

Query: 179 LLTTGWSVFVSAKRLVAGDSVLFIWNEKN-QLLLGIRRAIRPPTVMPSSVLSSDSMHIGL 237
            L  GWS FV AKRL  GD+V+F+      + ++G+RR                 M +G+
Sbjct: 510 TLAAGWSAFVKAKRLCVGDTVIFMRRRPGGEPIVGVRRK------------PHGGMLVGI 557

Query: 238 LAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSV 297
                  A  ++  T  F  R    E   PL              G R R+L   ++   
Sbjct: 558 PDKHVADAWLDAVGTAEFVVRREEVEGSPPLAP------------GTRVRLLMNPDDVRR 605

Query: 298 RRYMGTITGISDLDPVRWSNSHWRSVKVGWDEST--AGERQPRVSLWEIEPL 347
           R        + D+     S S WR ++V WD  +  A     RV+ W+++P+
Sbjct: 606 RSQPPVYGTVRDVH----SRSKWRMLEVDWDRDSPLAPTMNRRVNSWQVQPV 653


>gi|414882153|tpg|DAA59284.1| TPA: hypothetical protein ZEAMMB73_909747 [Zea mays]
          Length = 377

 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 51/113 (45%), Positives = 69/113 (61%), Gaps = 23/113 (20%)

Query: 109 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEW-KF 167
           K+ ++ FCKTLTASDTSTHGGFSVPRRAAE  FP L+F                  W +F
Sbjct: 117 KRMSHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLEF------------------WSRF 158

Query: 168 RHIFRGQPKRHLL----TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRA 216
           +   R   + +++    TTG S FV+ K+LV+ D+VLF+  +  +L LG+RRA
Sbjct: 159 KECKRTSMRSYVMAAPQTTGCSAFVNKKKLVSRDAVLFLRGDNGELRLGVRRA 211


>gi|25553616|dbj|BAC24876.1| auxin response factor 10-like protein [Oryza sativa Japonica Group]
 gi|50509194|dbj|BAD30348.1| auxin response factor 10-like protein [Oryza sativa Japonica Group]
          Length = 585

 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/295 (26%), Positives = 126/295 (42%), Gaps = 32/295 (10%)

Query: 8   LNSELWHACAGPLVS-LPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
           +  ++W ACA P    LPTVG+ V YFP GH+EQ  +   + +   I          +C+
Sbjct: 276 VTRDMWMACAAPKSGRLPTVGSLVYYFPDGHAEQCLSRPQEPLPGRI---------FLCK 326

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEE---QKDTFVPIELGIPSKQPTNYFCKTLTASD 123
           + +V + A   T+E  A ++L P++ ++   Q       +      Q    F K LT +D
Sbjct: 327 VTDVRLGA-AATNEALATISLVPIAADDHAFQLQAPADPDPAPAQSQSLVSFVKPLTYTD 385

Query: 124 TSTHGGFSVPR-RAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
             T   F VP+  AA  V P +  +   P   L  +DL   EW F + ++   +  +   
Sbjct: 386 V-TKNRFMVPKDDAAAGVLPHIQLNDDVP---LRIKDLSGKEWAFNYTWKAHTR--MFRN 439

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GW  F +A  LV GD+ +F+     ++ + +RR    P   P SV          +  A 
Sbjct: 440 GWMEFSNANGLVTGDNAVFMRRGNGEMFMAVRRTRNRPA--PFSVEE--------VIEAV 489

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSV 297
             AA    F V +  R    EFV+P    V      R + GM    ++  E+  +
Sbjct: 490 WRAARREPFEVSYCLRQDGDEFVVP-RDIVDDGLRARFAPGMAVNFVWAVEDGKL 543


>gi|125557472|gb|EAZ03008.1| hypothetical protein OsI_25149 [Oryza sativa Indica Group]
          Length = 541

 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 79/295 (26%), Positives = 126/295 (42%), Gaps = 32/295 (10%)

Query: 8   LNSELWHACAGPLVS-LPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
           +  ++W ACA P    LPTVG+ V YFP GH+EQ  +   + +   I          +C+
Sbjct: 253 VTRDMWMACAAPKSGRLPTVGSLVYYFPDGHAEQCLSRPQEPLPGRI---------FLCK 303

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEE---QKDTFVPIELGIPSKQPTNYFCKTLTASD 123
           + +V + A   T+E  A ++L P++ ++   Q       +      Q    F K LT +D
Sbjct: 304 VTDVRLGA-AATNEALATISLVPIAADDHAFQLQAPADPDPAPAQSQSLVSFVKPLTYTD 362

Query: 124 TSTHGGFSVPR-RAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
             T   F VP+  AA  V P +  +   P   L  +DL   EW F + ++   +  +   
Sbjct: 363 V-TKNRFMVPKDDAAAGVLPHIQLNDDVP---LRIKDLSGKEWAFNYTWKAHTR--MFRN 416

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GW  F +A  LV GD+ +F+     ++ + +RR    P   P SV          +  A 
Sbjct: 417 GWMEFSNANGLVTGDNAVFMRRGNGEMFMAVRRTRNRPA--PFSVEE--------VIEAV 466

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSV 297
             AA    F V +  R    EFV+P    V      R + GM    ++  E+  +
Sbjct: 467 WRAARREPFEVSYCSRQDGDEFVVP-RDIVDDGLRARFAPGMAVNFVWAVEDGKL 520


>gi|291196875|emb|CAX63123.1| ARF4 protein [Amborella trichopoda]
          Length = 431

 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 42/90 (46%), Positives = 63/90 (70%), Gaps = 2/90 (2%)

Query: 679 RTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 737
           R+  KV+K GS VGRS+D+S+ + Y++L  EL Q+F +EG   DP + GW++V+ D END
Sbjct: 314 RSCTKVHKHGSAVGRSIDLSKLNGYSDLMSELEQIFNMEGLLHDPEK-GWRVVYTDNEND 372

Query: 738 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           ++L+GDDPW+ F   V  I I + +DV+ M
Sbjct: 373 MVLVGDDPWQEFCDVVCKILICTQDDVENM 402



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 37/75 (49%), Positives = 46/75 (61%), Gaps = 5/75 (6%)

Query: 299 RYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFP 358
           R  G ITGI D+DP+RW +S WR + V WDE    E + RVS WEIEP +  P  P+L  
Sbjct: 1   RCSGVITGIGDIDPLRWPDSKWRCLMVRWDEDIGDEHRVRVSPWEIEP-SVLP--PALNV 57

Query: 359 LRLK--RPWHPSTSS 371
            RLK  RP  PS ++
Sbjct: 58  PRLKKLRPSLPSGAA 72


>gi|291196877|emb|CAX63126.1| ETTIN protein [Amborella trichopoda]
          Length = 478

 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 46/124 (37%), Positives = 77/124 (62%), Gaps = 11/124 (8%)

Query: 676 TPTRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDR 734
           T  R+  KV+K GS VGR++++S+F  Y++L  EL ++F +EG   DP + GWQ+V+ D 
Sbjct: 337 TANRSCTKVHKQGSMVGRAINLSKFEGYDDLISELERLFNMEGLLNDP-KKGWQVVYTDS 395

Query: 735 ENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM--------GEQGVESFSPSSGQRANSR 786
           ++D++L+GDDPW+ F + V  I I + ++V+KM          Q     +P++   A S+
Sbjct: 396 DDDMMLVGDDPWQEFCNIVSKILIYTHDEVEKMIPVVVASDDAQSCSEEAPTTTTEA-SK 454

Query: 787 GNCG 790
            +CG
Sbjct: 455 SSCG 458


>gi|224062031|ref|XP_002300720.1| predicted protein [Populus trichocarpa]
 gi|222842446|gb|EEE79993.1| predicted protein [Populus trichocarpa]
          Length = 75

 Score = 89.0 bits (219), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 38/66 (57%), Positives = 51/66 (77%)

Query: 682 VKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLL 741
           ++V K+GSVGRS+D+S F +Y EL   +  MFG++G   +P  SGW+LV+VD ENDVLL+
Sbjct: 10  LQVQKTGSVGRSIDVSSFKNYEELCSAIECMFGLDGLLNNPKGSGWKLVYVDYENDVLLI 69

Query: 742 GDDPWE 747
           GDDPWE
Sbjct: 70  GDDPWE 75


>gi|239983815|sp|A3BH91.1|Y7838_ORYSJ RecName: Full=B3 domain-containing protein Os07g0183700
 gi|125599354|gb|EAZ38930.1| hypothetical protein OsJ_23349 [Oryza sativa Japonica Group]
          Length = 524

 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 79/295 (26%), Positives = 126/295 (42%), Gaps = 32/295 (10%)

Query: 8   LNSELWHACAGPLVS-LPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQ 66
           +  ++W ACA P    LPTVG+ V YFP GH+EQ  +   + +   I          +C+
Sbjct: 236 VTRDMWMACAAPKSGRLPTVGSLVYYFPDGHAEQCLSRPQEPLPGRI---------FLCK 286

Query: 67  LHNVTMHADVETDEVYAQMTLQPLSPEE---QKDTFVPIELGIPSKQPTNYFCKTLTASD 123
           + +V + A   T+E  A ++L P++ ++   Q       +      Q    F K LT +D
Sbjct: 287 VTDVRLGA-AATNEALATISLVPIAADDHAFQLQAPADPDPAPAQSQSLVSFVKPLTYTD 345

Query: 124 TSTHGGFSVPR-RAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
             T   F VP+  AA  V P +  +   P   L  +DL   EW F + ++   +  +   
Sbjct: 346 V-TKNRFMVPKDDAAAGVLPHIQLNDDVP---LRIKDLSGKEWAFNYTWKAHTR--MFRN 399

Query: 183 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAA 242
           GW  F +A  LV GD+ +F+     ++ + +RR    P   P SV          +  A 
Sbjct: 400 GWMEFSNANGLVTGDNAVFMRRGNGEMFMAVRRTRNRPA--PFSVEE--------VIEAV 449

Query: 243 HAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSV 297
             AA    F V +  R    EFV+P    V      R + GM    ++  E+  +
Sbjct: 450 WRAARREPFEVSYCLRQDGDEFVVP-RDIVDDGLRARFAPGMAVNFVWAVEDGKL 503


>gi|326497483|dbj|BAK05831.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 186

 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/86 (48%), Positives = 59/86 (68%), Gaps = 3/86 (3%)

Query: 2  IGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPP 61
          +GD   L  ELWHACA PLV+ P VG  V YFPQGH EQV A+ N+   + +  Y +LPP
Sbjct: 14 VGDP--LYDELWHACAVPLVTAPRVGDLVFYFPQGHIEQVEASMNQVAGNQMRLY-DLPP 70

Query: 62 QLICQLHNVTMHADVETDEVYAQMTL 87
          +L+C++ N+ + A+ + D+VYAQ+ L
Sbjct: 71 KLLCRVINIELKAEADIDKVYAQVIL 96


>gi|301793233|emb|CBA12007.1| putative auxin response factor 10/16/17, partial [Cycas rumphii]
          Length = 528

 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/202 (32%), Positives = 93/202 (46%), Gaps = 22/202 (10%)

Query: 238 LAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS- 296
           +  +A  AA    F V + PRAS  EF +   + V A    + S GMRF+M FETE+SS 
Sbjct: 54  VVESATLAAAGQPFEVVYYPRASTPEFCVK-AQAVDAALRVQWSAGMRFKMAFETEDSSR 112

Query: 297 VRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP---MY 353
           +  +MGTI+ +   DPV W NS WR ++V WDE    +   RVS W +E +++ P   + 
Sbjct: 113 ISWFMGTISSVQLADPVCWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVEVVSSMPPIQLT 172

Query: 354 PSLFP-LRLKRPWHPSTSSFNDNRDETASGLNWLRGGTGEQGLTTLNFQSLGMF-PW--M 409
           P   P  +L+   HP                   +G  G   + TL    LG F PW  +
Sbjct: 173 PFTLPKKKLRVTQHPELQIEG-------------QGIMGGLQMATLTNNVLGQFNPWHSL 219

Query: 410 QQRVEPSFLGNDHNQQYQAMLA 431
            + +     G  H   Y   L+
Sbjct: 220 SENIPAGMQGARHGHIYGIALS 241



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 48/88 (54%), Gaps = 6/88 (6%)

Query: 682 VKVY-KSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 740
            KV+ +S  VGR+LD+S FSSY +L   L +MFGIE      L    ++++ D +  V  
Sbjct: 445 CKVFMESEDVGRTLDLSLFSSYEQLYHRLAKMFGIE-----ELELSNRVLYKDTDGTVRH 499

Query: 741 LGDDPWEAFVSNVWYIKILSPEDVQKMG 768
            GD+P+  F+  V  + ILS      MG
Sbjct: 500 TGDEPYRDFMKTVRRLTILSDSSSDNMG 527


>gi|242050918|ref|XP_002463203.1| hypothetical protein SORBIDRAFT_02g039703 [Sorghum bicolor]
 gi|241926580|gb|EER99724.1| hypothetical protein SORBIDRAFT_02g039703 [Sorghum bicolor]
          Length = 74

 Score = 86.7 bits (213), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 48/71 (67%), Positives = 58/71 (81%), Gaps = 3/71 (4%)

Query: 230 SDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRML 289
           SDSMHI L+AAAAH A+ NS FT+F+N RA+PSEFVI L KYV+A++HTR+ VGM FRML
Sbjct: 1   SDSMHISLIAAAAHVASANSWFTIFYNTRANPSEFVISLAKYVEALYHTRIYVGMHFRML 60

Query: 290 F---ETEESSV 297
           F   +TEES V
Sbjct: 61  FLRQQTEESMV 71


>gi|222636558|gb|EEE66690.1| hypothetical protein OsJ_23346 [Oryza sativa Japonica Group]
          Length = 721

 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 79/302 (26%), Positives = 132/302 (43%), Gaps = 40/302 (13%)

Query: 57  PNLPPQ------LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQ 110
           P+ PP+       +C++  V +  D   +E++A M+L P++ ++      P + G  S Q
Sbjct: 336 PSRPPEPLPGRVFLCKVTAVRL--DATRNELFATMSLIPVARDQAIQPQAPADPGPSSPQ 393

Query: 111 PTNY---FCKTLTASD-TSTHGGFSVPRR-AAEKVFPSLDFSLQPPAQELIARDLHDVEW 165
                  F K LT +D       F VP+R  A  V P L  +   P   L  +D+H  EW
Sbjct: 394 VQTTLVSFVKPLTCTDAVKNRYRFIVPKRETAMGVLPQLQLNEHVP---LYIKDMHGKEW 450

Query: 166 KFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWN-EKNQLLLGIRRAIRPPTVMP 224
              + ++     H+L++GW  F +A RLV GD+V+F+ + +  +  +G+RR ++P  V  
Sbjct: 451 VINYTWKEY--THMLSSGWIKFANANRLVTGDNVVFMRSMDSGERYMGLRRTLKPEPVSV 508

Query: 225 SSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGM 284
             V+            A   AA    F V +  R    EFV+P    V      + + GM
Sbjct: 509 DEVIE-----------AVWRAARLEPFEVTYLSRQDGDEFVVP-CGIVHNALRAKFTPGM 556

Query: 285 RFRMLFETEESSVRRY--MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLW 342
               ++  EE  +      G +  I +     ++ S WR ++V W       R   V+ W
Sbjct: 557 VVNFVWAVEEDRLPNVGPQGKVIAIEN-----YATSIWRMIQVEWPSCAGMNRY--VNFW 609

Query: 343 EI 344
           +I
Sbjct: 610 QI 611



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 84/303 (27%), Positives = 126/303 (41%), Gaps = 38/303 (12%)

Query: 60  PPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEE---QKDTFVPIELGIPSKQPTNYFC 116
           P   +C +  V + AD  T+E YA +TL P++  +         P       +Q   YF 
Sbjct: 26  PRVFLCTVAAVRLRADALTNEAYADITLDPVADHDVPRLLPAPAPAAAAGGQQQQLRYFV 85

Query: 117 KTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPK 176
           KTL +SD      F+VP   A+ VFP L  +     Q LI +DL      F +   G   
Sbjct: 86  KTLMSSDAEYRDRFAVPMDVAKDVFPPLVDAKA--VQPLIVKDLQGSPMTFDYGRNGN-- 141

Query: 177 RHLLTTGWSVFVSAKRLVAGDSVLFI-WNEKNQLLLGIR-----------RAIRPPTVMP 224
           R  L   W  F      V GDSV+F+   + ++L +G+R           R  RPPT +P
Sbjct: 142 RVTLAKVWKKFRDDMDFVDGDSVIFMRRRDDDELYVGVRRQRTLDKPLRTRRSRPPTPLP 201

Query: 225 SSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAV-FHTRVSVG 283
            +V          + AAA  AA    FT  +  R    EFV+P     + +   +R +  
Sbjct: 202 VAVQE--------VIAAAGRAAAGEQFTATYRSRQDGDEFVVPREVVEEGLRLRSRFTPE 253

Query: 284 MRFRMLFETEESSVRRY--MGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSL 341
           M    ++  E+ +       G IT I D      +   WRSV++GW  +   E     + 
Sbjct: 254 MEVEFVWALEDGAPPSVGPHGKITAIHD------TTWMWRSVEIGW--TGGSEMNKYANF 305

Query: 342 WEI 344
           W++
Sbjct: 306 WQV 308


>gi|222066052|emb|CAX21481.1| ARF8 protein [Olea europaea]
          Length = 56

 Score = 85.1 bits (209), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 48/56 (85%), Positives = 52/56 (92%)

Query: 223 MPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHT 278
           MPSSVLSSDSMHIGLLAAAAHAAATNS F +F+NPRASPSEFVIPL KY KA++HT
Sbjct: 1   MPSSVLSSDSMHIGLLAAAAHAAATNSRFCIFYNPRASPSEFVIPLAKYAKALYHT 56


>gi|2245394|gb|AAC49752.1| ARF1-binding protein [Arabidopsis thaliana]
 gi|20146085|emb|CAD29696.1| putative auxin-induced protein 26 [Arabidopsis thaliana]
 gi|20372805|emb|CAD30210.1| putative auxin-induced protein 30 [Arabidopsis thaliana]
          Length = 454

 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 39/93 (41%), Positives = 62/93 (66%), Gaps = 2/93 (2%)

Query: 678 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           +R+  KV+K G ++GRS+D+S+F +Y EL  EL ++F   G+   P +  W +V+ D EN
Sbjct: 327 SRSCTKVHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGELMAP-KKDWLIVYTDEEN 385

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGE 769
           D++L+GDDPW+ F   V  I I + E+V+KM +
Sbjct: 386 DMMLVGDDPWQEFCCMVRKIFIYTKEEVRKMNQ 418


>gi|12484201|gb|AAG53999.1|AF336918_1 ARF2 [Arabidopsis thaliana]
 gi|225879150|dbj|BAH30645.1| hypothetical protein [Arabidopsis thaliana]
          Length = 454

 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 61/91 (67%), Gaps = 2/91 (2%)

Query: 678 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           +R+  KV+K G ++GRS+D+S+F +Y EL  EL ++F   G+   P +  W +V+ D EN
Sbjct: 327 SRSCTKVHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGELMAP-KKDWLIVYTDEEN 385

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           D++L+GDDPW+ F   V  I I + E+V+KM
Sbjct: 386 DMMLVGDDPWQEFCCMVRKIFIYTKEEVRKM 416


>gi|359473594|ref|XP_002273120.2| PREDICTED: uncharacterized protein LOC100266020 [Vitis vinifera]
          Length = 1203

 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 38/61 (62%), Positives = 49/61 (80%)

Query: 205 EKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEF 264
           E+  LL G+RRA R  T +PSSVLS+DS+HIG+LAA +HAAA  S FT+F+NPRA PS+F
Sbjct: 500 EQKPLLFGVRRANRQQTSLPSSVLSTDSLHIGVLAATSHAAANRSPFTIFYNPRACPSKF 559

Query: 265 V 265
           +
Sbjct: 560 I 560



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 20/35 (57%), Positives = 25/35 (71%)

Query: 712  MFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPW 746
            M G+E    D   S W++V+VD ENDVLL+GDDPW
Sbjct: 994  MLGVEDVLNDEKGSSWKMVYVDYENDVLLVGDDPW 1028


>gi|255635390|gb|ACU18048.1| unknown [Glycine max]
          Length = 120

 Score = 82.0 bits (201), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 42/80 (52%), Positives = 50/80 (62%), Gaps = 1/80 (1%)

Query: 284 MRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWE 343
           MRFRM FETE+++ RR  G I GISD+DPVRW  S WR + V WD+  A  R  RVS WE
Sbjct: 1   MRFRMRFETEDAAERRCTGLIAGISDVDPVRWLGSKWRCLLVRWDDIEAARRN-RVSPWE 59

Query: 344 IEPLTTFPMYPSLFPLRLKR 363
           IEP  +     +L    LKR
Sbjct: 60  IEPSGSASNSSNLMSAGLKR 79


>gi|449516481|ref|XP_004165275.1| PREDICTED: auxin response factor 9-like, partial [Cucumis sativus]
          Length = 342

 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 38/90 (42%), Positives = 63/90 (70%), Gaps = 2/90 (2%)

Query: 679 RTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREND 737
           R+  KV+  G +VGR++D++RF+ Y++L  +L +MF IEG+    L+  WQ+V+ D E+D
Sbjct: 217 RSCTKVHMQGIAVGRAVDLTRFNQYDDLLRKLEEMFDIEGELCGSLKK-WQVVYTDDEDD 275

Query: 738 VLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           ++L+GDDPW  F S V  I I + E+V+++
Sbjct: 276 MMLVGDDPWNEFCSMVRKIFIYTTEEVKRL 305


>gi|194708604|gb|ACF88386.1| unknown [Zea mays]
 gi|413920951|gb|AFW60883.1| hypothetical protein ZEAMMB73_247628 [Zea mays]
          Length = 379

 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 41/104 (39%), Positives = 64/104 (61%), Gaps = 2/104 (1%)

Query: 678 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           TR+  KV+K G ++GRS+D+++F+ Y EL  EL +MF   G+ +   +  W +V+ D E 
Sbjct: 245 TRSCKKVHKQGMALGRSVDLTKFNGYTELVAELDEMFDFNGELKGCSKE-WMVVYTDYEG 303

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSG 780
           D++L+GDDPW  F S V  I + + E+VQ+M    + S    SG
Sbjct: 304 DMMLVGDDPWNEFCSMVHKIFVYTREEVQRMNPGALNSRPEDSG 347


>gi|414868950|tpg|DAA47507.1| TPA: hypothetical protein ZEAMMB73_035781, partial [Zea mays]
          Length = 78

 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/48 (77%), Positives = 41/48 (85%), Gaps = 3/48 (6%)

Query: 3  GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQV---AATTNK 47
          G+ +CLNSELWHACAGPLVSLP VG+RVVYFPQGHSEQV   A + NK
Sbjct: 17 GEQRCLNSELWHACAGPLVSLPVVGSRVVYFPQGHSEQVGHSAVSLNK 64


>gi|449475565|ref|XP_004154491.1| PREDICTED: uncharacterized protein LOC101227484 [Cucumis sativus]
          Length = 180

 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 33/65 (50%), Positives = 49/65 (75%), Gaps = 1/65 (1%)

Query: 8  LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQL 67
          L  ELW ACAGPLV +P  G RV YFPQGH EQ+  +TN+E++  IP++ +LPP+++C++
Sbjct: 20 LYEELWKACAGPLVEVPVDGERVFYFPQGHMEQLEESTNQELNHQIPHF-DLPPKILCRV 78

Query: 68 HNVTM 72
           N+ +
Sbjct: 79 VNIRL 83


>gi|62321072|dbj|BAD94156.1| auxin response factor 9 [Arabidopsis thaliana]
          Length = 313

 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 52/161 (32%), Positives = 85/161 (52%), Gaps = 6/161 (3%)

Query: 611 NSVVFGVHIDSSGLLLPTTVSSFTTSVD---PGVSSMPLGDSGFHNSMYGCMQDSSELLH 667
           N  +FG+ + SS L +P   ++    ++   P + S     S          Q+ +E   
Sbjct: 127 NYRLFGIDLMSSSLAVPEEKTAPMRPINISKPTMDSHSDPKSEISKVSEEKKQEPAEGSP 186

Query: 668 NVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSG 726
              Q  Q + TR+  KV   G  VGR++D++    YNEL +++ ++F I+G+     R+ 
Sbjct: 187 KEVQSKQSSSTRSRTKVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDIKGELRS--RNQ 244

Query: 727 WQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           W++VF D E D++L+GDDPW  F + V  I I S E+V+KM
Sbjct: 245 WEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKM 285


>gi|224104803|ref|XP_002333896.1| predicted protein [Populus trichocarpa]
 gi|224163513|ref|XP_002338568.1| predicted protein [Populus trichocarpa]
 gi|222838928|gb|EEE77279.1| predicted protein [Populus trichocarpa]
 gi|222872802|gb|EEF09933.1| predicted protein [Populus trichocarpa]
          Length = 109

 Score = 79.7 bits (195), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 38/79 (48%), Positives = 51/79 (64%), Gaps = 6/79 (7%)

Query: 254 FFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRR-----YMGTITGIS 308
           F   RAS SEF IP  K++K++  +  S GMRF+M FETE+++ RR     Y G ITG+S
Sbjct: 23  FLPCRASSSEFTIPFNKFLKSLDQS-FSSGMRFKMCFETEDAAERRFAIHGYTGIITGVS 81

Query: 309 DLDPVRWSNSHWRSVKVGW 327
           +LDP RW  S W+ + V W
Sbjct: 82  ELDPARWPGSKWKCLLVSW 100


>gi|413926488|gb|AFW66420.1| hypothetical protein ZEAMMB73_859793 [Zea mays]
          Length = 94

 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 33/38 (86%), Positives = 37/38 (97%)

Query: 4  DNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQV 41
          ++KCLNSELWHACAGPLVSLP+VG+RVVYFPQGH EQV
Sbjct: 23 EHKCLNSELWHACAGPLVSLPSVGSRVVYFPQGHGEQV 60


>gi|357487803|ref|XP_003614189.1| Homeobox-leucine zipper protein HDG11 [Medicago truncatula]
 gi|355515524|gb|AES97147.1| Homeobox-leucine zipper protein HDG11 [Medicago truncatula]
          Length = 373

 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 110/256 (42%), Gaps = 75/256 (29%)

Query: 517 SFSKANFMDSSTEISVSISPMQNMLGSLPEGSGNLLNFSG---AGPSMLRQQFPQQSLGS 573
           SFS    +  S +I  S +   ++L   P+G G LLN S    +G  ++ +Q PQQS   
Sbjct: 189 SFSGQGLVGHSFDIGESHNNHSSLL--CPKGKGKLLNPSSLPSSGQLLMNEQLPQQSWTP 246

Query: 574 KYEPSQVRDFVHSMSLPSSYNGKDAAVGTENCNTDSQNSVVFGVHIDSSGLLLPTTVSSF 633
           +Y+  QV  F ++MS  + Y G+D+A    + + D QN ++ GV  DSS LLLPT     
Sbjct: 247 RYQNMQVDTFGNAMS-HAQYFGQDSATVPPHFDLDVQNHILLGVDFDSSDLLLPTI---- 301

Query: 634 TTSVDPGVSSMPLGDSGFHNSMYGCMQDSSELLH-NVGQIDQLTPTRTFVKVYKSGSVGR 692
                                      DSS+LL   +   D L PT            G 
Sbjct: 302 ---------------------------DSSDLLLPTIDSSDLLLPTTIPGYTTSLCETGA 334

Query: 693 SLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSN 752
           S              +LG+ FG EG                         DDPWE+F+++
Sbjct: 335 ST------------MQLGE-FGFEG------------------------FDDPWESFMNS 357

Query: 753 VWYIKILSPEDVQKMG 768
           +W+ +ILSPED+QK+G
Sbjct: 358 IWHDEILSPEDIQKIG 373


>gi|297725437|ref|NP_001175082.1| Os07g0183600 [Oryza sativa Japonica Group]
 gi|255677566|dbj|BAH93810.1| Os07g0183600 [Oryza sativa Japonica Group]
          Length = 354

 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 115/268 (42%), Gaps = 32/268 (11%)

Query: 85  MTLQPLSPEEQKDTFVPIELGIPSKQPTNY---FCKTLTASD-TSTHGGFSVPRR-AAEK 139
           M+L P++ ++      P + G  S Q       F K LT +D       F VP+R  A  
Sbjct: 1   MSLIPVARDQAIQPQAPADPGPSSPQVQTTLVSFVKPLTCTDAVKNRYRFIVPKRETAMG 60

Query: 140 VFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSV 199
           V P L  +   P   L  +D+H  EW   + ++     H+L++GW  F +A RLV GD+V
Sbjct: 61  VLPQLQLNEHVP---LYIKDMHGKEWVINYTWKEY--THMLSSGWIKFANANRLVTGDNV 115

Query: 200 LFIWN-EKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPR 258
           +F+ + +  +  +G+RR ++P  V    V+            A   AA    F V +  R
Sbjct: 116 VFMRSMDSGERYMGLRRTLKPEPVSVDEVIE-----------AVWRAARLEPFEVTYLSR 164

Query: 259 ASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY--MGTITGISDLDPVRWS 316
               EFV+P    V      + + GM    ++  EE  +      G +  I +     ++
Sbjct: 165 QDGDEFVVP-CGIVHNALRAKFTPGMVVNFVWAVEEDRLPNVGPQGKVIAIEN-----YA 218

Query: 317 NSHWRSVKVGWDESTAGERQPRVSLWEI 344
            S WR ++V W       R   V+ W+I
Sbjct: 219 TSIWRMIQVEWPSCAGMNRY--VNFWQI 244


>gi|359474692|ref|XP_003631516.1| PREDICTED: LOW QUALITY PROTEIN: serine/threonine-protein kinase
           ATG1-like [Vitis vinifera]
          Length = 548

 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 35/73 (47%), Positives = 50/73 (68%)

Query: 712 MFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQG 771
           MFG+EG   D   S W++V+VD ENDVLL+GDDP   FV  V  I+ILSP +VQ+M E+G
Sbjct: 429 MFGLEGVLNDQKGSSWKMVYVDYENDVLLVGDDPQNEFVGCVRCIRILSPSEVQQMSEEG 488

Query: 772 VESFSPSSGQRAN 784
           ++  + ++ +  N
Sbjct: 489 MQLLNSTTIEGIN 501


>gi|224064496|ref|XP_002301505.1| predicted protein [Populus trichocarpa]
 gi|222843231|gb|EEE80778.1| predicted protein [Populus trichocarpa]
          Length = 91

 Score = 75.1 bits (183), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/61 (49%), Positives = 42/61 (68%)

Query: 141 FPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVL 200
           F  LD++ +PP + ++A+D+H   WKFRHI+RG P+RHLL TGWS FV+ K    G  + 
Sbjct: 10  FSRLDYTAEPPEETILAKDVHGETWKFRHIYRGAPRRHLLNTGWSNFVNKKNSWLGTRLC 69

Query: 201 F 201
           F
Sbjct: 70  F 70


>gi|297836890|ref|XP_002886327.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332167|gb|EFH62586.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 216

 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/141 (37%), Positives = 68/141 (48%), Gaps = 13/141 (9%)

Query: 248 NSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRYMGTITGI 307
            SC  V F   A+ +EFVIP  KY+ ++    + +G RF M FE  +S   R  G + G+
Sbjct: 88  TSCDVVLF--LATHAEFVIPYEKYITSI-RNPICIGTRFIMRFEMNDSP-ERCAGVVAGV 143

Query: 308 SDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWHP 367
            DLDP RW NS W         S   + Q RVSLWEI+P  +    P L      RPW  
Sbjct: 144 YDLDPYRWPNSKWCD-----GMSLVSDHQERVSLWEIDPSVSL---PHLSIQSSPRPWEI 195

Query: 368 S-TSSFNDNRDETASGLNWLR 387
             +S+F    D    GL  LR
Sbjct: 196 DPSSTFAGILDHYIGGLRSLR 216


>gi|218191398|gb|EEC73825.1| hypothetical protein OsI_08552 [Oryza sativa Indica Group]
          Length = 113

 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 31/37 (83%), Positives = 34/37 (91%)

Query: 6  KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVA 42
          KCLN ELWHAC+ PLV LP+VGTRVVYFPQGHSEQV+
Sbjct: 25 KCLNLELWHACSSPLVCLPSVGTRVVYFPQGHSEQVS 61


>gi|222623484|gb|EEE57616.1| hypothetical protein OsJ_08008 [Oryza sativa Japonica Group]
          Length = 140

 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 31/37 (83%), Positives = 34/37 (91%)

Query: 6  KCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVA 42
          KCLN ELWHAC+ PLV LP+VGTRVVYFPQGHSEQV+
Sbjct: 25 KCLNLELWHACSSPLVCLPSVGTRVVYFPQGHSEQVS 61


>gi|110739728|dbj|BAF01771.1| auxin response factor-like protein [Arabidopsis thaliana]
          Length = 194

 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 3/91 (3%)

Query: 678 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           +R+  KV   G +VGR++D++   SY+EL +EL +MF I+G+     R  W +VF D E 
Sbjct: 80  SRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQGQL--LARDKWIVVFTDDEG 137

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPEDVQKM 767
           D++L GDDPW  F      I I S ++V+KM
Sbjct: 138 DMMLAGDDPWNEFCKMAKKIFIYSSDEVKKM 168


>gi|304308169|gb|ADL70397.1| auxin response factor 11 [Arabidopsis thaliana]
          Length = 188

 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 40/104 (38%), Positives = 60/104 (57%), Gaps = 5/104 (4%)

Query: 648 DSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELR 706
           DS   +S   C   +S   ++  +  Q T TR+ +KV   G+ VGR++D++   SY+EL 
Sbjct: 85  DSNISDSTTKCQDPNSS--NSPKEQKQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDELI 142

Query: 707 EELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFV 750
           +EL +MF IEG+     +  W +VF D E D +L+GDDPW  F 
Sbjct: 143 KELEKMFEIEGELSP--KDKWAIVFTDDEGDRMLVGDDPWNEFC 184


>gi|298112255|gb|ADB96374.2| auxin response factor 11 [Arabidopsis thaliana]
          Length = 185

 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 40/104 (38%), Positives = 60/104 (57%), Gaps = 5/104 (4%)

Query: 648 DSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELR 706
           DS   +S   C   +S   ++  +  Q T TR+ +KV   G+ VGR++D++   SY+EL 
Sbjct: 85  DSNISDSTTKCQDPNSS--NSPKEQKQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDELI 142

Query: 707 EELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFV 750
           +EL +MF IEG+     +  W +VF D E D +L+GDDPW  F 
Sbjct: 143 KELEKMFEIEGELSP--KDKWAIVFTDDEGDRMLVGDDPWNEFC 184


>gi|304308163|gb|ADL70394.1| auxin response factor 11 [Arabidopsis thaliana]
          Length = 188

 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 40/104 (38%), Positives = 60/104 (57%), Gaps = 5/104 (4%)

Query: 648 DSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELR 706
           DS   +S   C   +S   ++  +  Q T TR+ +KV   G+ VGR++D++   SY+EL 
Sbjct: 85  DSNISDSTTKCQDPNSS--NSPKEQKQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDELI 142

Query: 707 EELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFV 750
           +EL +MF IEG+     +  W +VF D E D +L+GDDPW  F 
Sbjct: 143 KELEKMFEIEGELSP--KDKWAIVFTDDEGDRMLVGDDPWNEFC 184


>gi|304308179|gb|ADL70402.1| auxin response factor 11 [Arabidopsis thaliana]
          Length = 187

 Score = 72.4 bits (176), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 40/104 (38%), Positives = 60/104 (57%), Gaps = 5/104 (4%)

Query: 648 DSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELR 706
           DS   +S   C   +S   ++  +  Q T TR+ +KV   G+ VGR++D++   SY+EL 
Sbjct: 85  DSNISDSTTKCQDPNSS--NSPKEQKQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDELI 142

Query: 707 EELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFV 750
           +EL +MF IEG+     +  W +VF D E D +L+GDDPW  F 
Sbjct: 143 KELEKMFEIEGELSP--KDKWAIVFTDDEGDRMLVGDDPWNEFC 184


>gi|304308157|gb|ADL70391.1| auxin response factor 11 [Arabidopsis thaliana]
 gi|304308165|gb|ADL70395.1| auxin response factor 11 [Arabidopsis thaliana]
 gi|304308167|gb|ADL70396.1| auxin response factor 11 [Arabidopsis thaliana]
          Length = 185

 Score = 72.4 bits (176), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 40/104 (38%), Positives = 60/104 (57%), Gaps = 5/104 (4%)

Query: 648 DSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELR 706
           DS   +S   C   +S   ++  +  Q T TR+ +KV   G+ VGR++D++   SY+EL 
Sbjct: 85  DSNISDSTTKCQDPNSS--NSPKEQKQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDELI 142

Query: 707 EELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFV 750
           +EL +MF IEG+     +  W +VF D E D +L+GDDPW  F 
Sbjct: 143 KELEKMFEIEGELSP--KDKWAIVFTDDEGDRMLVGDDPWNEFC 184


>gi|304308173|gb|ADL70399.1| auxin response factor 11 [Arabidopsis thaliana]
          Length = 192

 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 40/104 (38%), Positives = 60/104 (57%), Gaps = 5/104 (4%)

Query: 648 DSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELR 706
           DS   +S   C   +S   ++  +  Q T TR+ +KV   G+ VGR++D++   SY+EL 
Sbjct: 85  DSNISDSTTKCQDPNSS--NSPKEQKQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDELI 142

Query: 707 EELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFV 750
           +EL +MF IEG+     +  W +VF D E D +L+GDDPW  F 
Sbjct: 143 KELEKMFEIEGELSP--KDKWAIVFTDDEGDRMLVGDDPWNEFC 184


>gi|284811273|gb|ADB96375.1| auxin response factor 11 [Arabidopsis thaliana]
 gi|284811275|gb|ADB96376.1| auxin response factor 11 [Arabidopsis thaliana]
 gi|284811277|gb|ADB96377.1| auxin response factor 11 [Arabidopsis thaliana]
 gi|304308159|gb|ADL70392.1| auxin response factor 11 [Arabidopsis thaliana]
 gi|304308161|gb|ADL70393.1| auxin response factor 11 [Arabidopsis thaliana]
 gi|304308175|gb|ADL70400.1| auxin response factor 11 [Arabidopsis thaliana]
 gi|304308181|gb|ADL70403.1| auxin response factor 11 [Arabidopsis thaliana]
          Length = 183

 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/103 (38%), Positives = 60/103 (58%), Gaps = 5/103 (4%)

Query: 648 DSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELR 706
           DS   +S   C   +S   ++  +  Q T TR+ +KV   G+ VGR++D++   SY+EL 
Sbjct: 85  DSNISDSTTKCQDPNSS--NSPKEQKQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDELI 142

Query: 707 EELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAF 749
           +EL +MF IEG+     +  W +VF D E D +L+GDDPW  F
Sbjct: 143 KELEKMFEIEGELSP--KDKWAIVFTDDEGDRMLVGDDPWNEF 183


>gi|25272004|gb|AAN74744.1| hypothetical protein [Marchantia polymorpha]
          Length = 690

 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 54/103 (52%), Gaps = 1/103 (0%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F K +T SD        +P++ AE+ FP LD +L  P Q L   D+    W+FR+ +   
Sbjct: 199 FEKAVTPSDVGKLNRLVIPKQHAERCFP-LDLALNAPCQTLSFEDVSGKHWRFRYSYWNS 257

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAI 217
            + ++ T GWS F+  K+L AGD+V F      +L +  RR +
Sbjct: 258 SQSYVFTKGWSCFLKGKKLEAGDTVSFERGPNQELYIDFRRRL 300



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 1/111 (0%)

Query: 107 PSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWK 166
           P+ Q  + F K +T SD        +P++ AE+ FP LD +L  P Q L   D+    W+
Sbjct: 64  PTMQREHLFEKAVTPSDVGKLNRLVIPKQHAERCFP-LDLALNVPCQTLSFEDVSGKHWR 122

Query: 167 FRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAI 217
           FR+ +    + ++ T  WS F+  K+L AGD+V F      +L +  RR +
Sbjct: 123 FRYSYWNSSQSYVFTKSWSCFLKGKKLEAGDTVSFERGPNQELYIDFRRRL 173


>gi|284811269|gb|ADB96373.1| auxin response factor 11 [Arabidopsis thaliana]
 gi|304308171|gb|ADL70398.1| auxin response factor 11 [Arabidopsis thaliana]
 gi|304308177|gb|ADL70401.1| auxin response factor 11 [Arabidopsis thaliana]
          Length = 180

 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/100 (39%), Positives = 59/100 (59%), Gaps = 5/100 (5%)

Query: 648 DSGFHNSMYGCMQDSSELLHNVGQIDQLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELR 706
           DS   +S   C   +S   ++  +  Q T TR+ +KV   G+ VGR++D++   SY+EL 
Sbjct: 85  DSNISDSTTKCQDPNSS--NSPKEQKQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDELI 142

Query: 707 EELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPW 746
           +EL +MF IEG+     +  W +VF D E D +L+GDDPW
Sbjct: 143 KELEKMFEIEGELSP--KDKWAIVFTDDEGDRMLVGDDPW 180


>gi|361069823|gb|AEW09223.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
 gi|383171017|gb|AFG68785.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
 gi|383171018|gb|AFG68786.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
 gi|383171019|gb|AFG68787.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
 gi|383171020|gb|AFG68788.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
 gi|383171021|gb|AFG68789.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
 gi|383171022|gb|AFG68790.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
 gi|383171023|gb|AFG68791.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
 gi|383171024|gb|AFG68792.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
 gi|383171025|gb|AFG68793.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
 gi|383171026|gb|AFG68794.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
 gi|383171027|gb|AFG68795.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
 gi|383171028|gb|AFG68796.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
 gi|383171029|gb|AFG68797.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
 gi|383171030|gb|AFG68798.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
 gi|383171031|gb|AFG68799.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
 gi|383171032|gb|AFG68800.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
          Length = 89

 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 33/62 (53%), Positives = 43/62 (69%), Gaps = 4/62 (6%)

Query: 11 ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 70
          ELWHACAGPL+SLP  GT VVYFPQGH EQ + +  ++    +  Y  LPPQ+ C++ NV
Sbjct: 32 ELWHACAGPLISLPRKGTLVVYFPQGHLEQASTSLKQQ---QMRPY-ELPPQIFCRVLNV 87

Query: 71 TM 72
           +
Sbjct: 88 NL 89


>gi|168034769|ref|XP_001769884.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162678790|gb|EDQ65244.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 84

 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/58 (55%), Positives = 41/58 (70%)

Query: 719 FEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFS 776
            ED  +S W++VFVD END LLLGD+PWE FVS V  IKILSP +V +M +  + + S
Sbjct: 1   MEDSQQSSWKIVFVDNENDTLLLGDEPWEEFVSCVRSIKILSPAEVAQMNQHVLAAVS 58


>gi|168022407|ref|XP_001763731.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162684975|gb|EDQ71373.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 269

 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 52/101 (51%), Gaps = 1/101 (0%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F K +T SD        +P++ AE+ FP LD S   P Q L   D+    W+FR+ +   
Sbjct: 165 FDKAVTPSDVGKLNRLVIPKQHAERCFP-LDLSANSPGQTLSFEDVSGKHWRFRYSYWNS 223

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRR 215
            + ++LT GWS FV  K+L AGD V F      +L +  RR
Sbjct: 224 SQSYVLTKGWSRFVKEKKLDAGDIVSFERGPSQELYIDFRR 264


>gi|357489187|ref|XP_003614881.1| Auxin response factor [Medicago truncatula]
 gi|355516216|gb|AES97839.1| Auxin response factor [Medicago truncatula]
          Length = 356

 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 67/142 (47%), Gaps = 9/142 (6%)

Query: 63  LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTAS 122
           L C +  V +  D  TDEV+A++ L PL+ +E      P+  G       N      T +
Sbjct: 7   LPCIISAVNLFVDALTDEVFAKLLLTPLTAQEPPPP-PPVVPGQEDDDGNNLVSYFKTLT 65

Query: 123 DTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTT 182
            T T   F++    A+ +FP LD      +Q +I  DL   EW   ++     K   L T
Sbjct: 66  TTETKSVFNISHECADLIFPKLDLE---KSQIIIVTDLKSQEWGCTYV-----KNSRLRT 117

Query: 183 GWSVFVSAKRLVAGDSVLFIWN 204
           GWS F   K+LVA DSV+F+ N
Sbjct: 118 GWSHFRKEKKLVAKDSVVFMKN 139


>gi|224084810|ref|XP_002307409.1| predicted protein [Populus trichocarpa]
 gi|222856858|gb|EEE94405.1| predicted protein [Populus trichocarpa]
          Length = 336

 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 4/124 (3%)

Query: 251 FTVFFNPRAS-PSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGIS 308
           F V + PRA   S+FV+   + V+A      + GMR +M  ETE+SS +  + GT++G  
Sbjct: 25  FDVVYYPRAGWYSDFVV-RAEAVEAALGVFWTAGMRVKMAMETEDSSRMTWFQGTVSGTG 83

Query: 309 DLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWHPS 368
             D   W  S WR +++ WDE    +   RVS W++E + T P   + FP  +K+  +P+
Sbjct: 84  LPDSGAWRGSPWRMLQITWDEPEVLQNAKRVSPWQVEFVATTPQLQAAFP-PMKKLRYPN 142

Query: 369 TSSF 372
            S F
Sbjct: 143 DSRF 146


>gi|413920950|gb|AFW60882.1| hypothetical protein ZEAMMB73_247628 [Zea mays]
          Length = 314

 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/71 (42%), Positives = 49/71 (69%), Gaps = 2/71 (2%)

Query: 678 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           TR+  KV+K G ++GRS+D+++F+ Y EL  EL +MF   G+ +   +  W +V+ D E 
Sbjct: 245 TRSCKKVHKQGMALGRSVDLTKFNGYTELVAELDEMFDFNGELKGCSKE-WMVVYTDYEG 303

Query: 737 DVLLLGDDPWE 747
           D++L+GDDPW+
Sbjct: 304 DMMLVGDDPWK 314


>gi|168028298|ref|XP_001766665.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162682097|gb|EDQ68518.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 52

 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 32/52 (61%), Positives = 39/52 (75%)

Query: 719 FEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQ 770
            EDP +S W +V+VD END LLLGD PWEAFVS V  IKILSP +V +M ++
Sbjct: 1   MEDPQQSDWLIVYVDNENDTLLLGDGPWEAFVSCVRSIKILSPVEVAQMSQE 52


>gi|302762190|ref|XP_002964517.1| hypothetical protein SELMODRAFT_405821 [Selaginella moellendorffii]
 gi|300168246|gb|EFJ34850.1| hypothetical protein SELMODRAFT_405821 [Selaginella moellendorffii]
          Length = 335

 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 43/112 (38%), Positives = 59/112 (52%), Gaps = 7/112 (6%)

Query: 690 VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAF 749
           +GR+LD+ +F  Y EL EEL  +FGI+        S WQ V+VD E D+LL+GDDPW  F
Sbjct: 158 MGRALDLRKFRGYRELLEELQHLFGIDKNLNG---SEWQAVYVDNEGDMLLVGDDPWGVF 214

Query: 750 V-SNVWYIKIL-SPEDVQKMGEQGVESFS--PSSGQRANSRGNCGRDPVGSL 797
               V +   + S  ++QK+  Q   S +  PSS        +  R P G L
Sbjct: 215 TFQGVLHDGAMHSAAEIQKLTVQARNSSTEEPSSRLSDQQDSSSPRRPTGCL 266



 Score = 48.1 bits (113), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 19/29 (65%), Positives = 20/29 (68%)

Query: 299 RYMGTITGISDLDPVRWSNSHWRSVKVGW 327
           RYMGTITGI D+DP RW  S WR  K  W
Sbjct: 55  RYMGTITGIGDIDPARWPGSKWRFPKCSW 83


>gi|168037539|ref|XP_001771261.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162677502|gb|EDQ63972.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 227

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 1/97 (1%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F K +T SD        +P++ AE+ FP LD S   P Q L   D+    W+FR+ +   
Sbjct: 131 FDKAVTPSDVGKLNRLVIPKQHAERCFP-LDLSANSPGQTLSFEDVSGKHWRFRYSYWNS 189

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLL 211
            + ++LT GWS FV  K+L AGD V F     ++L +
Sbjct: 190 SQSYVLTKGWSRFVKEKKLDAGDIVSFERGRNHELYI 226


>gi|353441048|gb|AEQ94108.1| putative auxin response transcription factor 1 [Elaeis
          guineensis]
          Length = 58

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/57 (49%), Positives = 46/57 (80%), Gaps = 1/57 (1%)

Query: 31 VYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTL 87
          +YFPQGH EQ+ A+TN+ +D H+P + NLP +++C++ +V + A+ +TDEVYAQ+T+
Sbjct: 1  IYFPQGHMEQLEASTNQGLDQHMPLF-NLPSKILCRVVHVQLRAEPDTDEVYAQITI 56


>gi|80750878|dbj|BAE48151.1| auxin response factor 3 [Arabidopsis thaliana]
          Length = 100

 Score = 65.1 bits (157), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/76 (44%), Positives = 44/76 (57%), Gaps = 18/76 (23%)

Query: 3   GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYP----N 58
           G   CL  ELWHACAGPL+SLP  G+ V+YFPQGH EQ             P++      
Sbjct: 39  GGGVCL--ELWHACAGPLISLPKRGSLVLYFPQGHLEQA------------PDFSAAIYG 84

Query: 59  LPPQLICQLHNVTMHA 74
           LPP + C++ +V +HA
Sbjct: 85  LPPHVFCRILDVKLHA 100


>gi|304308263|gb|ADL70444.1| auxin response factor 18 [Arabidopsis thaliana]
 gi|304308267|gb|ADL70446.1| auxin response factor 18 [Arabidopsis thaliana]
 gi|304308271|gb|ADL70448.1| auxin response factor 18 [Arabidopsis thaliana]
 gi|304308273|gb|ADL70449.1| auxin response factor 18 [Arabidopsis thaliana]
 gi|304308277|gb|ADL70451.1| auxin response factor 18 [Arabidopsis thaliana]
 gi|304308279|gb|ADL70452.1| auxin response factor 18 [Arabidopsis thaliana]
 gi|304308281|gb|ADL70453.1| auxin response factor 18 [Arabidopsis thaliana]
 gi|304308283|gb|ADL70454.1| auxin response factor 18 [Arabidopsis thaliana]
          Length = 225

 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/70 (44%), Positives = 46/70 (65%), Gaps = 3/70 (4%)

Query: 678 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           +R+  KV   G +VGR++D++   SY+EL +EL +MF I+G+     R  W +VF D E 
Sbjct: 158 SRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQGQLL--ARDKWIVVFTDDEG 215

Query: 737 DVLLLGDDPW 746
           D++L GDDPW
Sbjct: 216 DMMLAGDDPW 225


>gi|284811299|gb|ADB96388.1| auxin response factor 18 [Arabidopsis thaliana]
 gi|284811301|gb|ADB96389.1| auxin response factor 18 [Arabidopsis thaliana]
 gi|284811305|gb|ADB96391.1| auxin response factor 18 [Arabidopsis thaliana]
 gi|284811307|gb|ADB96392.1| auxin response factor 18 [Arabidopsis thaliana]
          Length = 222

 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/70 (44%), Positives = 46/70 (65%), Gaps = 3/70 (4%)

Query: 678 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           +R+  KV   G +VGR++D++   SY+EL +EL +MF I+G+     R  W +VF D E 
Sbjct: 155 SRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQGQLL--ARDKWIVVFTDDEG 212

Query: 737 DVLLLGDDPW 746
           D++L GDDPW
Sbjct: 213 DMMLAGDDPW 222


>gi|304308287|gb|ADL70456.1| auxin response factor 18 [Arabidopsis thaliana]
          Length = 225

 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/70 (44%), Positives = 46/70 (65%), Gaps = 3/70 (4%)

Query: 678 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           +R+  KV   G +VGR++D++   SY+EL +EL +MF I+G+     R  W +VF D E 
Sbjct: 158 SRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQGQLL--ARDKWIVVFTDDEG 215

Query: 737 DVLLLGDDPW 746
           D++L GDDPW
Sbjct: 216 DMMLAGDDPW 225


>gi|304308275|gb|ADL70450.1| auxin response factor 18 [Arabidopsis thaliana]
 gi|304308285|gb|ADL70455.1| auxin response factor 18 [Arabidopsis thaliana]
          Length = 224

 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/70 (44%), Positives = 46/70 (65%), Gaps = 3/70 (4%)

Query: 678 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           +R+  KV   G +VGR++D++   SY+EL +EL +MF I+G+     R  W +VF D E 
Sbjct: 157 SRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQGQLL--ARDKWIVVFTDDEG 214

Query: 737 DVLLLGDDPW 746
           D++L GDDPW
Sbjct: 215 DMMLAGDDPW 224


>gi|304308269|gb|ADL70447.1| auxin response factor 18 [Arabidopsis thaliana]
          Length = 225

 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/70 (44%), Positives = 46/70 (65%), Gaps = 3/70 (4%)

Query: 678 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           +R+  KV   G +VGR++D++   SY+EL +EL +MF I+G+     R  W +VF D E 
Sbjct: 158 SRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQGQLL--ARDKWIVVFTDDEG 215

Query: 737 DVLLLGDDPW 746
           D++L GDDPW
Sbjct: 216 DMMLAGDDPW 225


>gi|304308265|gb|ADL70445.1| auxin response factor 18 [Arabidopsis thaliana]
          Length = 226

 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/70 (44%), Positives = 46/70 (65%), Gaps = 3/70 (4%)

Query: 678 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           +R+  KV   G +VGR++D++   SY+EL +EL +MF I+G+     R  W +VF D E 
Sbjct: 159 SRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQGQLL--ARDKWIVVFTDDEG 216

Query: 737 DVLLLGDDPW 746
           D++L GDDPW
Sbjct: 217 DMMLAGDDPW 226


>gi|298113241|gb|ADB96390.2| auxin response factor 18 [Arabidopsis thaliana]
          Length = 231

 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/70 (44%), Positives = 46/70 (65%), Gaps = 3/70 (4%)

Query: 678 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           +R+  KV   G +VGR++D++   SY+EL +EL +MF I+G+     R  W +VF D E 
Sbjct: 164 SRSRTKVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQGQLL--ARDKWIVVFTDDEG 221

Query: 737 DVLLLGDDPW 746
           D++L GDDPW
Sbjct: 222 DMMLAGDDPW 231



 Score = 42.0 bits (97), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 26/59 (44%), Positives = 34/59 (57%), Gaps = 5/59 (8%)

Query: 318 SHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTFPM-YPSLFP---LRLKRPWHPSTSS 371
           S WRS++V WDE T  +R  +VS WEIEP L T P+  P+  P    +  RP  PS  +
Sbjct: 3   SKWRSLQVQWDEPTTVQRPDKVSPWEIEPFLATSPISTPAQQPQSKCKRSRPIEPSVKT 61


>gi|62865710|gb|AAY17049.1| p-167-u3_1 [Pinus resinosa]
          Length = 83

 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/62 (50%), Positives = 43/62 (69%), Gaps = 2/62 (3%)

Query: 730 VFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESF--SPSSGQRANSRG 787
           VFVD+E DVLLLGDDPWE FV+NV +I ILSP +V  M ++ +E +   P+    ++S  
Sbjct: 1   VFVDKEKDVLLLGDDPWEEFVNNVRFIXILSPPEVLXMXQEDMEXWXSXPTXXXTSSSSE 60

Query: 788 NC 789
           +C
Sbjct: 61  DC 62


>gi|224085810|ref|XP_002307705.1| predicted protein [Populus trichocarpa]
 gi|222857154|gb|EEE94701.1| predicted protein [Populus trichocarpa]
          Length = 53

 Score = 63.5 bits (153), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 25/37 (67%), Positives = 32/37 (86%)

Query: 712 MFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEA 748
           MFG++G   +P RSGW+LV+VD ENDVLL+GDDPW+A
Sbjct: 1   MFGLDGLLNNPKRSGWKLVYVDYENDVLLIGDDPWDA 37


>gi|62865712|gb|AAY17050.1| p-167-u4_1 [Pinus resinosa]
          Length = 83

 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 29/44 (65%), Positives = 38/44 (86%)

Query: 730 VFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVE 773
           VFVD+ENDVLLLGDDPWE FV++V  I+ILSP +V +M ++G+E
Sbjct: 1   VFVDKENDVLLLGDDPWEEFVNSVRSIRILSPPEVLQMTQEGME 44


>gi|298113103|gb|ADC31715.2| auxin response factor 13 [Arabidopsis thaliana]
          Length = 190

 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 30/118 (25%)

Query: 230 SDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRML 289
           ++ M  G++A+  +A  T   F V + PR                             M 
Sbjct: 1   ANCMQHGVIASVVNAFKTKCMFNVVYKPR-----------------------------MQ 31

Query: 290 FETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 347
           FE ++ S +RY GTI G++D+ P  W +S WRS+KV WDE +   R  +VS W+IE L
Sbjct: 32  FEGKDFSEKRYDGTIIGVNDMSP-HWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHL 88


>gi|304308193|gb|ADL70409.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 173

 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 30/118 (25%)

Query: 230 SDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRML 289
           ++ M  G++A+  +A  T   F V + PR                             M 
Sbjct: 1   ANCMQHGVIASVVNAFKTKCMFNVVYKPR-----------------------------MQ 31

Query: 290 FETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 347
           FE ++ S +RY GTI G++D+ P  W +S WRS+KV WDE +   R  +VS W+IE L
Sbjct: 32  FEGKDFSEKRYDGTIIGVNDMSP-HWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHL 88


>gi|284930239|gb|ADC31717.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 176

 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 30/118 (25%)

Query: 230 SDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRML 289
           ++ M  G++A+  +A  T   F V + PR                             M 
Sbjct: 1   ANCMQHGVIASVVNAFKTKCMFNVVYKPR-----------------------------MQ 31

Query: 290 FETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 347
           FE ++ S +RY GTI G++D+ P  W +S WRS+KV WDE +   R  +VS W+IE L
Sbjct: 32  FEGKDFSEKRYDGTIIGVNDMSP-HWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHL 88


>gi|304308183|gb|ADL70404.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 203

 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 55/117 (47%), Gaps = 30/117 (25%)

Query: 231 DSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLF 290
           + M  G++A+  +A  T   F V + PR                             M F
Sbjct: 1   NCMQHGVIASVVNAFKTKCMFNVVYKPR-----------------------------MQF 31

Query: 291 ETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 347
           E ++ S +RY GTI G++D+ P  W +S WRS+KV WDE +   R  +VS W+IE L
Sbjct: 32  EGKDFSEKRYDGTIIGVNDMSP-HWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHL 87


>gi|284930237|gb|ADC31716.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 189

 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 30/118 (25%)

Query: 230 SDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRML 289
           ++ M  G++A+  +A  T   F V + PR                             M 
Sbjct: 1   ANCMQHGVIASVVNAFKTKCMFNVVYKPR-----------------------------MQ 31

Query: 290 FETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 347
           FE ++ S +RY GTI G++D+ P  W +S WRS+KV WDE +   R  +VS W+IE L
Sbjct: 32  FEGKDFSEKRYDGTIIGVNDMSP-HWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHL 88


>gi|304308191|gb|ADL70408.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 183

 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 55/117 (47%), Gaps = 30/117 (25%)

Query: 231 DSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLF 290
           + M  G++A+  +A  T   F V + PR                             M F
Sbjct: 1   NCMQHGVIASVVNAFKTKCMFNVVYKPR-----------------------------MQF 31

Query: 291 ETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 347
           E ++ S +RY GTI G++D+ P  W +S WRS+KV WDE +   R  +VS W+IE L
Sbjct: 32  EGKDFSEKRYDGTIIGVNDMSP-HWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHL 87


>gi|294460143|gb|ADE75654.1| unknown [Picea sitchensis]
 gi|294464227|gb|ADE77628.1| unknown [Picea sitchensis]
          Length = 96

 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 41/59 (69%), Gaps = 1/59 (1%)

Query: 712 MFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQ 770
           MF IEG+  +P + GWQ+V+ D E D++L+GDDPW+ F S V  I I + E+V+KM  Q
Sbjct: 1   MFNIEGELGNPSK-GWQVVYTDNEGDMMLVGDDPWQEFCSIVRKIFIYTREEVEKMTPQ 58


>gi|304308207|gb|ADL70416.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 187

 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 54/115 (46%), Gaps = 30/115 (26%)

Query: 233 MHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFET 292
           M  G++A+  +A  T   F V + PR                             M FE 
Sbjct: 2   MQHGVIASVVNAFKTKCMFNVVYKPR-----------------------------MQFEG 32

Query: 293 EESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 347
           ++ S +RY GTI G++D+ P  W +S WRS+KV WDE +   R  +VS W+IE L
Sbjct: 33  KDFSEKRYDGTIIGVNDMSP-HWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHL 86


>gi|304308203|gb|ADL70414.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 188

 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 54/115 (46%), Gaps = 30/115 (26%)

Query: 233 MHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFET 292
           M  G++A+  +A  T   F V + PR                             M FE 
Sbjct: 2   MQHGVIASVVNAFKTKCMFNVVYKPR-----------------------------MQFEG 32

Query: 293 EESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 347
           ++ S +RY GTI G++D+ P  W +S WRS+KV WDE +   R  +VS W+IE L
Sbjct: 33  KDFSEKRYDGTIIGVNDMSP-HWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHL 86


>gi|85069285|gb|ABC69714.1| ARF2-like protein [Nicotiana tabacum]
          Length = 264

 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 2/70 (2%)

Query: 678 TRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           +R+  KV K G ++GRS+D+SR   Y EL  EL ++FG EG   D  +  W + + DRE 
Sbjct: 171 SRSCTKVLKYGCALGRSIDMSRVKGYGELISELDKLFGFEGSLLDGSKD-WHVTYQDREG 229

Query: 737 DVLLLGDDPW 746
           +  LLGD PW
Sbjct: 230 NTKLLGDYPW 239


>gi|304308185|gb|ADL70405.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 188

 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 53/115 (46%), Gaps = 30/115 (26%)

Query: 233 MHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFET 292
           M  G++A+  +A  T   F V + PR                             M FE 
Sbjct: 2   MQHGVIASVVNAFKTKCMFNVVYKPR-----------------------------MQFEG 32

Query: 293 EESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 347
            + S +RY GTI G++D+ P  W +S WRS+KV WDE +   R  +VS W+IE L
Sbjct: 33  NDFSEKRYDGTIIGVNDMSP-HWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHL 86


>gi|242078245|ref|XP_002443891.1| hypothetical protein SORBIDRAFT_07g003880 [Sorghum bicolor]
 gi|241940241|gb|EES13386.1| hypothetical protein SORBIDRAFT_07g003880 [Sorghum bicolor]
          Length = 253

 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 5/87 (5%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F K LT SD        VP++ AE+ FP+     Q     L  +D     W+FR+ + G 
Sbjct: 57  FDKVLTPSDVGKLNRLVVPKQHAERFFPAAGAGTQ-----LCFQDCGGALWQFRYSYWGS 111

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLF 201
            + +++T GWS FV A RL AGD+V F
Sbjct: 112 SQSYVMTKGWSRFVRAARLAAGDTVTF 138


>gi|304308197|gb|ADL70411.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 175

 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 55/118 (46%), Gaps = 30/118 (25%)

Query: 230 SDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRML 289
           ++ M  G++A+  +A  T   F V + PR                             M 
Sbjct: 1   ANCMQHGVIASVVNAFKTKCMFNVVYKPR-----------------------------MQ 31

Query: 290 FETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 347
           FE ++ S +RY GTI G++D+ P  W +S WRS+KV WDE +   R  +V  W+IE L
Sbjct: 32  FEGKDFSEKRYDGTIIGVNDMSP-HWKDSEWRSLKVQWDELSPFLRPNQVLPWDIEHL 88


>gi|304308201|gb|ADL70413.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 180

 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/78 (43%), Positives = 48/78 (61%), Gaps = 3/78 (3%)

Query: 272 VKAVFHTRV--SVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDE 329
           V   F T+   +V  + RM FE ++ S +RY GTI G++D+ P  W +S WRS+KV WDE
Sbjct: 5   VVNAFKTKCMFNVVYKPRMQFEGKDFSEKRYDGTIIGVNDMSP-HWKDSEWRSLKVQWDE 63

Query: 330 STAGERQPRVSLWEIEPL 347
            +   R  +VS W+IE L
Sbjct: 64  LSPFLRPNQVSPWDIEHL 81


>gi|304308195|gb|ADL70410.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 168

 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/78 (43%), Positives = 48/78 (61%), Gaps = 3/78 (3%)

Query: 272 VKAVFHTRV--SVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDE 329
           V   F T+   +V  + RM FE ++ S +RY GTI G++D+ P  W +S WRS+KV WDE
Sbjct: 4   VVNAFKTKCMFNVVYKPRMQFEGKDFSEKRYDGTIIGVNDMSP-HWKDSEWRSLKVQWDE 62

Query: 330 STAGERQPRVSLWEIEPL 347
            +   R  +VS W+IE L
Sbjct: 63  LSPFLRPNQVSPWDIEHL 80


>gi|304308199|gb|ADL70412.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 190

 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 30/118 (25%)

Query: 230 SDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRML 289
           ++ M  G++A+  +A  T   F V + PR                             M 
Sbjct: 1   ANCMQHGVIASVVNAFKTKCMFNVVYKPR-----------------------------MQ 31

Query: 290 FETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 347
           FE ++ S +RY GTI G++D+ P  W +S W+S+KV WDE +   R  +VS W+IE L
Sbjct: 32  FEGKDFSEKRYDGTIIGVNDMSP-HWKDSEWQSLKVQWDELSPFLRPNQVSPWDIEHL 88


>gi|304308187|gb|ADL70406.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 190

 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 55/118 (46%), Gaps = 30/118 (25%)

Query: 230 SDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRML 289
           ++ M  G++A+  +A  T   F V + PR                             M 
Sbjct: 1   ANCMQHGVIASVVNAFKTKCMFNVVYKPR-----------------------------MQ 31

Query: 290 FETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 347
           FE ++ S +RY GTI G++D+ P  W +S WRS+KV WDE +   R  +V  W+IE L
Sbjct: 32  FEGKDFSEKRYDGTIIGVNDMSP-HWKDSEWRSLKVQWDELSPFLRPNQVLPWDIEHL 88


>gi|15228649|ref|NP_191756.1| B3 domain-containing transcription factor NGA2 [Arabidopsis
           thaliana]
 gi|75182616|sp|Q9M268.1|NGA2_ARATH RecName: Full=B3 domain-containing transcription factor NGA2;
           AltName: Full=Protein NGATHA 2
 gi|6899895|emb|CAB71904.1| RAV-like protein [Arabidopsis thaliana]
 gi|108385265|gb|ABF85768.1| At3g61970 [Arabidopsis thaliana]
 gi|227060687|gb|ACP18972.1| NGATHA2 [Arabidopsis thaliana]
 gi|332646767|gb|AEE80288.1| B3 domain-containing transcription factor NGA2 [Arabidopsis
           thaliana]
          Length = 299

 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 66/131 (50%), Gaps = 6/131 (4%)

Query: 95  QKDTFVPIELGIPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQE 154
           Q+D   PIE    S +  + F K +T SD        +P++ AE+ FP LD S    + +
Sbjct: 3   QEDKEKPIEEASSSMEREHMFDKVVTPSDVGKLNRLVIPKQHAERYFP-LDNSTTNDSNK 61

Query: 155 LIARDLHDVE---WKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWN--EKNQL 209
            +  +  D     W+FR+ +    + +++T GWS FV  K+L AGD V F  +   K++L
Sbjct: 62  GLLLNFEDRSGNSWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRDSCNKDKL 121

Query: 210 LLGIRRAIRPP 220
            +  RR  + P
Sbjct: 122 YIDWRRRPKIP 132


>gi|26450371|dbj|BAC42301.1| putative RAV [Arabidopsis thaliana]
          Length = 299

 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 66/131 (50%), Gaps = 6/131 (4%)

Query: 95  QKDTFVPIELGIPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQE 154
           Q+D   PIE    S +  + F K +T SD        +P++ AE+ FP LD S    + +
Sbjct: 3   QEDKEKPIEEASSSMEREHMFDKVVTPSDVGKLNRLVIPKQHAERYFP-LDNSTTNDSNK 61

Query: 155 LIARDLHDVE---WKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWN--EKNQL 209
            +  +  D     W+FR+ +    + +++T GWS FV  K+L AGD V F  +   K++L
Sbjct: 62  GLLLNFEDRSGNSWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRDSCNKDKL 121

Query: 210 LLGIRRAIRPP 220
            +  RR  + P
Sbjct: 122 YIDWRRRPKIP 132


>gi|356537126|ref|XP_003537081.1| PREDICTED: B3 domain-containing protein At5g06250-like [Glycine
           max]
          Length = 337

 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 60/120 (50%), Gaps = 4/120 (3%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIA--RDLHDVEWKFRHIFR 172
           F K LT SD        +P++ AEK FP    S     + L+    D     W+FR+ + 
Sbjct: 73  FEKPLTPSDVGKLNRLVIPKQHAEKYFPLSGDSGGSECKGLLLSFEDESGKCWRFRYSYW 132

Query: 173 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWN--EKNQLLLGIRRAIRPPTVMPSSVLSS 230
              + ++LT GWS +V  KRL AGD VLF  +  +  +L +G RR  +    +P + +SS
Sbjct: 133 NSSQSYVLTKGWSRYVKDKRLDAGDVVLFERHRVDAQRLFIGWRRRRQSDAALPPAHVSS 192


>gi|297817532|ref|XP_002876649.1| hypothetical protein ARALYDRAFT_486704 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322487|gb|EFH52908.1| hypothetical protein ARALYDRAFT_486704 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 304

 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 65/131 (49%), Gaps = 6/131 (4%)

Query: 95  QKDTFVPIELGIPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQE 154
           Q+D   PIE    S +  + F K +T SD        +P++ AE+ FP LD S      +
Sbjct: 3   QEDKEKPIEEASSSMEREHMFDKVVTPSDVGKLNRLVIPKQHAERYFP-LDNSTTNDNNK 61

Query: 155 LIARDLHDVE---WKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWN--EKNQL 209
            +  +  D     W+FR+ +    + +++T GWS FV  K+L AGD V F  +   K++L
Sbjct: 62  GLLLNFEDRSGNSWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRDSGNKDKL 121

Query: 210 LLGIRRAIRPP 220
            +  RR  + P
Sbjct: 122 YIDWRRRPKIP 132


>gi|297834672|ref|XP_002885218.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297331058|gb|EFH61477.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 158

 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 1/86 (1%)

Query: 678 TRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           T  FVKVY  G  +GR LD+  FS Y  L E L  MF       +  R    L + D++ 
Sbjct: 71  TSLFVKVYMEGVPIGRKLDLCAFSGYESLLENLSHMFDTSIICGNRDRKHHVLTYEDKDG 130

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPE 762
           D +++GD PW+ F+  V  +KI  PE
Sbjct: 131 DWMMVGDIPWDMFLETVRRLKITRPE 156


>gi|365818563|gb|AEX00370.1| IAA35 [Solanum lycopersicum]
          Length = 196

 Score = 59.7 bits (143), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 5/84 (5%)

Query: 681 FVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVL 739
           +VKV   G  + R +D++ F SYN+L + L  MFG   +  D     ++L + D+E D L
Sbjct: 116 YVKVKMEGVGIARKIDLTLFHSYNKLTDTLISMFGKNKEIGDV----YKLTYQDKEGDWL 171

Query: 740 LLGDDPWEAFVSNVWYIKILSPED 763
           L GD PW  FV +V  +K++  ED
Sbjct: 172 LAGDVPWRTFVGSVQRLKLIRDED 195


>gi|304308189|gb|ADL70407.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 169

 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/67 (46%), Positives = 44/67 (65%), Gaps = 1/67 (1%)

Query: 281 SVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVS 340
           +V  + RM FE ++ S +RY GTI G++D+ P  W +S WRS+KV WDE +   R  +VS
Sbjct: 2   NVVYKPRMQFEGKDFSEKRYDGTIIGVNDMSP-HWKDSEWRSLKVQWDELSPFLRPNQVS 60

Query: 341 LWEIEPL 347
            W+IE L
Sbjct: 61  PWDIEHL 67


>gi|297740162|emb|CBI30344.3| unnamed protein product [Vitis vinifera]
          Length = 239

 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 72/167 (43%), Gaps = 12/167 (7%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F K LT SD        +P++ AEK FP L          L   D     W+FR+ +   
Sbjct: 2   FEKPLTPSDVGKLNRLVIPKQHAEKYFP-LGGDSGEKGLLLSFEDECGKCWRFRYSYWNS 60

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWN--EKNQLLLGIRRAIRPPTVMPSSVLSSDS 232
            + ++LT GWS FV  KRL AGD VLF  +  + ++  +G RR   P    P++      
Sbjct: 61  SQSYVLTKGWSRFVKEKRLDAGDVVLFQRDRSDADRFFIGWRRRAGPAQDNPAAAPP--- 117

Query: 233 MHIGLLAAAAHAAATNSCFT-VFFNPRASPSEFVIPLTKYVKAVFHT 278
                +A   +   T+  +T VF++  A PS    P   Y     H 
Sbjct: 118 -----VAVHTNTGNTSVGWTRVFYSAHAYPSHPHAPPLPYQPDCLHA 159


>gi|304322699|gb|ADL70802.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
          Length = 158

 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 1/86 (1%)

Query: 678 TRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           T  FVKVY  G  +GR LD+  FS Y  L E L  MF       +  R    L + D++ 
Sbjct: 71  TSLFVKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGNRDRKHHVLTYEDKDG 130

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPE 762
           D +++GD PW+ F+  V  +KI  PE
Sbjct: 131 DWMMVGDIPWDMFLETVRRLKITRPE 156


>gi|302141887|emb|CBI19090.3| unnamed protein product [Vitis vinifera]
          Length = 320

 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 71/143 (49%), Gaps = 4/143 (2%)

Query: 204 NEKNQLLLGIRRAIRPPTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSE 263
           N  ++L +G+RR  R       S  SS  +    +A AA  AA    F V + PR   S+
Sbjct: 4   NSNSELFIGVRRDARWNRNGERS--SSGRVRAEEVAVAAELAAQGMPFEVVYYPRVGSSD 61

Query: 264 FVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDLDPVRWSNSHWRS 322
           FV+   + V+       + GMR +M  ETE+SS    + GT++  + +D   W  S WR 
Sbjct: 62  FVVK-AEVVEEALSVFWTGGMRVKMAMETEDSSKTSLFQGTVSSATVMDNGPWRGSLWRM 120

Query: 323 VKVGWDESTAGERQPRVSLWEIE 345
           ++V WDE    +   RVS W++E
Sbjct: 121 LQVTWDEPEVLQNVMRVSPWQVE 143


>gi|304322701|gb|ADL70803.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
          Length = 151

 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 1/86 (1%)

Query: 678 TRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           T  FVKVY  G  +GR LD+  FS Y  L E L  MF       +  R    L + D++ 
Sbjct: 64  TSLFVKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGNRDRKHHVLTYEDKDG 123

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPE 762
           D +++GD PW+ F+  V  +KI  PE
Sbjct: 124 DWMMVGDIPWDMFLETVRRLKITRPE 149


>gi|298108643|gb|ADB93684.2| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
          Length = 155

 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 1/86 (1%)

Query: 678 TRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           T  FVKVY  G  +GR LD+  FS Y  L E L  MF       +  R    L + D++ 
Sbjct: 70  TSLFVKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGNRDRKHHVLTYEDKDG 129

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPE 762
           D +++GD PW+ F+  V  +KI  PE
Sbjct: 130 DWMMVGDIPWDMFLETVRRLKITRPE 155


>gi|413917350|gb|AFW57282.1| hypothetical protein ZEAMMB73_740283 [Zea mays]
          Length = 249

 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 4/104 (3%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F K LT SD        VP++ AE+ FP+        + +L  +D     W+FR+ + G 
Sbjct: 61  FDKVLTPSDVGKLNRLVVPKQHAERFFPAAG----AGSTQLCFQDRGGALWQFRYSYWGS 116

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR 218
            + +++T GWS FV A RL AGD+V F  +   +  +  R   R
Sbjct: 117 SQSYVMTKGWSRFVRAARLAAGDTVTFSRSGGGRYFIEYRHCQR 160


>gi|304322697|gb|ADL70801.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
          Length = 158

 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 1/86 (1%)

Query: 678 TRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           T  FVKVY  G  +GR LD+  FS Y  L E L  MF       +  R    L + D++ 
Sbjct: 71  TSLFVKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGNRDRKHHVLTYEDKDG 130

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPE 762
           D +++GD PW+ F+  V  +KI  PE
Sbjct: 131 DWMMVGDIPWDMFLETVRRLKITRPE 156


>gi|15229074|ref|NP_188387.1| auxin-responsive protein IAA31 [Arabidopsis thaliana]
 gi|46395870|sp|Q8H174.2|IAA31_ARATH RecName: Full=Auxin-responsive protein IAA31; AltName:
           Full=Indoleacetic acid-induced protein 31
 gi|9294148|dbj|BAB02050.1| unnamed protein product [Arabidopsis thaliana]
 gi|15810012|gb|AAL06933.1| AT3g17600/MKP6_15 [Arabidopsis thaliana]
 gi|49616379|gb|AAT67086.1| IAA31 [Arabidopsis thaliana]
 gi|298108635|gb|ADB93680.2| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
 gi|298108639|gb|ADB93682.2| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
 gi|298108641|gb|ADB93683.2| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
 gi|304322703|gb|ADL70804.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
 gi|304322705|gb|ADL70805.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
 gi|304322707|gb|ADL70806.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
 gi|304322709|gb|ADL70807.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
 gi|304322713|gb|ADL70809.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
 gi|304322715|gb|ADL70810.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
 gi|304322717|gb|ADL70811.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
 gi|304322719|gb|ADL70812.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
 gi|332642452|gb|AEE75973.1| auxin-responsive protein IAA31 [Arabidopsis thaliana]
          Length = 158

 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 1/86 (1%)

Query: 678 TRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           T  FVKVY  G  +GR LD+  FS Y  L E L  MF       +  R    L + D++ 
Sbjct: 71  TSLFVKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGNRDRKHHVLTYEDKDG 130

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPE 762
           D +++GD PW+ F+  V  +KI  PE
Sbjct: 131 DWMMVGDIPWDMFLETVRRLKITRPE 156


>gi|304322695|gb|ADL70800.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
 gi|304322711|gb|ADL70808.1| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
          Length = 157

 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 1/86 (1%)

Query: 678 TRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           T  FVKVY  G  +GR LD+  FS Y  L E L  MF       +  R    L + D++ 
Sbjct: 70  TSLFVKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGNRDRKHHVLTYEDKDG 129

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPE 762
           D +++GD PW+ F+  V  +KI  PE
Sbjct: 130 DWMMVGDIPWDMFLETVRRLKITRPE 155


>gi|298108637|gb|ADB93681.2| indole-3-acetic acid inducible 31 [Arabidopsis thaliana]
          Length = 138

 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 1/86 (1%)

Query: 678 TRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           T  FVKVY  G  +GR LD+  FS Y  L E L  MF       +  R    L + D++ 
Sbjct: 51  TSLFVKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGNRDRKHHVLTYEDKDG 110

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPE 762
           D +++GD PW+ F+  V  +KI  PE
Sbjct: 111 DWMMVGDIPWDMFLETVRRLKITRPE 136


>gi|302819737|ref|XP_002991538.1| hypothetical protein SELMODRAFT_133669 [Selaginella moellendorffii]
 gi|300140740|gb|EFJ07460.1| hypothetical protein SELMODRAFT_133669 [Selaginella moellendorffii]
          Length = 262

 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 50/101 (49%), Gaps = 1/101 (0%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F K +T SD        +P++ AE+ FP LD S       L   D+    W+FR+ +   
Sbjct: 159 FDKAVTPSDVGKLNRLVIPKQHAERCFP-LDLSANEKGLLLSFEDITGKVWRFRYSYWNS 217

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRR 215
            + ++LT GWS FV  K+L AGD V F      +L +  RR
Sbjct: 218 SQSYVLTKGWSRFVKEKKLDAGDIVTFERGPGQELYISWRR 258


>gi|302794600|ref|XP_002979064.1| hypothetical protein SELMODRAFT_110104 [Selaginella moellendorffii]
 gi|300153382|gb|EFJ20021.1| hypothetical protein SELMODRAFT_110104 [Selaginella moellendorffii]
          Length = 261

 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 50/101 (49%), Gaps = 1/101 (0%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F K +T SD        +P++ AE+ FP LD S       L   D+    W+FR+ +   
Sbjct: 158 FDKAVTPSDVGKLNRLVIPKQHAERCFP-LDLSANEKGLLLSFEDITGKVWRFRYSYWNS 216

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRR 215
            + ++LT GWS FV  K+L AGD V F      +L +  RR
Sbjct: 217 SQSYVLTKGWSRFVKEKKLDAGDIVTFERGPGQELYISWRR 257


>gi|242062916|ref|XP_002452747.1| hypothetical protein SORBIDRAFT_04g031710 [Sorghum bicolor]
 gi|241932578|gb|EES05723.1| hypothetical protein SORBIDRAFT_04g031710 [Sorghum bicolor]
          Length = 434

 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 1/87 (1%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F K +T SD        +P++ AEK FP LD +       L   D     W+FR+ +   
Sbjct: 103 FDKVVTPSDVGKLNRLVIPKQYAEKYFP-LDAAANEKGLLLSFEDSAGKHWRFRYSYWNS 161

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLF 201
            + +++T GWS FV  KRLVAGD+V F
Sbjct: 162 SQSYVMTKGWSRFVKEKRLVAGDTVSF 188


>gi|312282513|dbj|BAJ34122.1| unnamed protein product [Thellungiella halophila]
          Length = 249

 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 53/93 (56%), Gaps = 14/93 (15%)

Query: 681 FVKVYKSG-SVGRSLDISRFSSYNELREELGQMF--------GIEGKFEDPLR-----SG 726
           F+KV   G ++GR +D++  SSY  L + L  MF        G+ G+F  PLR     S 
Sbjct: 133 FIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRNNPGTIGLTGQFTKPLRLLDGSSE 192

Query: 727 WQLVFVDRENDVLLLGDDPWEAFVSNVWYIKIL 759
           + L + D+E D +L+GD PW  F+++V  ++++
Sbjct: 193 FVLTYEDKEGDWMLVGDVPWRMFITSVKRLRVM 225


>gi|449445748|ref|XP_004140634.1| PREDICTED: B3 domain-containing transcription factor NGA2-like
           [Cucumis sativus]
 gi|449515921|ref|XP_004164996.1| PREDICTED: B3 domain-containing transcription factor NGA2-like
           [Cucumis sativus]
          Length = 354

 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 1/87 (1%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F K +T SD        +P++ AEK FP LD S       L   D H   W+FR+ +   
Sbjct: 94  FDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSTNDKGLILNFEDRHGKPWRFRYSYWNS 152

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLF 201
            + +++T GWS FV  K+L AGD V F
Sbjct: 153 SQSYVMTKGWSRFVKEKKLDAGDIVSF 179


>gi|15223284|ref|NP_171611.1| B3 domain-containing transcription factor NGA3 [Arabidopsis
           thaliana]
 gi|75192354|sp|Q9MAN1.1|NGA3_ARATH RecName: Full=B3 domain-containing transcription factor NGA3;
           AltName: Full=Protein NGATHA3
 gi|6715649|gb|AAF26476.1|AC007323_17 T25K16.3 [Arabidopsis thaliana]
 gi|227060706|gb|ACP18973.1| NGATHA3 [Arabidopsis thaliana]
 gi|332189098|gb|AEE27219.1| B3 domain-containing transcription factor NGA3 [Arabidopsis
           thaliana]
          Length = 358

 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 84/205 (40%), Gaps = 22/205 (10%)

Query: 106 IPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEW 165
           IP  +  + F K +T SD        +P++ AE+ FP LD S       L  +D +   W
Sbjct: 47  IPPPEKEHMFDKVVTPSDVGKLNRLVIPKQHAERYFP-LDSSNNQNGTLLNFQDRNGKMW 105

Query: 166 KFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLF---IWNEKNQLLLGIRRAIRPPTV 222
           +FR+ +    + +++T GWS FV  K+L AGD V F   I +E  +  L I    RP   
Sbjct: 106 RFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGIGDESERSKLYIDWRHRPD-- 163

Query: 223 MPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLTKYVKAVFHTRVSV 282
                +S    H            T S ++  F+          PL +Y     H  +++
Sbjct: 164 -----MSLVQAHQFGNFGFNFNFPTTSQYSNRFH----------PLPEYNSVPIHRGLNI 208

Query: 283 GMRFRMLFETEESSVRRY-MGTITG 306
           G   R  + T+      Y  G + G
Sbjct: 209 GNHQRSYYNTQRQEFVGYGYGNLAG 233


>gi|359482026|ref|XP_002275955.2| PREDICTED: B3 domain-containing protein At2g36080-like [Vitis
           vinifera]
          Length = 346

 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 72/167 (43%), Gaps = 12/167 (7%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F K LT SD        +P++ AEK FP L          L   D     W+FR+ +   
Sbjct: 109 FEKPLTPSDVGKLNRLVIPKQHAEKYFP-LGGDSGEKGLLLSFEDECGKCWRFRYSYWNS 167

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWN--EKNQLLLGIRRAIRPPTVMPSSVLSSDS 232
            + ++LT GWS FV  KRL AGD VLF  +  + ++  +G RR   P    P++      
Sbjct: 168 SQSYVLTKGWSRFVKEKRLDAGDVVLFQRDRSDADRFFIGWRRRAGPAQDNPAAAPP--- 224

Query: 233 MHIGLLAAAAHAAATNSCFT-VFFNPRASPSEFVIPLTKYVKAVFHT 278
                +A   +   T+  +T VF++  A PS    P   Y     H 
Sbjct: 225 -----VAVHTNTGNTSVGWTRVFYSAHAYPSHPHAPPLPYQPDCLHA 266


>gi|308080706|ref|NP_001183918.1| uncharacterized protein LOC100502511 [Zea mays]
 gi|238015438|gb|ACR38754.1| unknown [Zea mays]
 gi|413938267|gb|AFW72818.1| hypothetical protein ZEAMMB73_941356 [Zea mays]
          Length = 422

 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 1/87 (1%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F K +T SD        +P++ AEK FP LD +       L   D     W+FR+ +   
Sbjct: 101 FDKVVTPSDVGKLNRLVIPKQYAEKYFP-LDAAANEKGLLLSFEDSAGKHWRFRYSYWNS 159

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLF 201
            + +++T GWS FV  KRLVAGD+V F
Sbjct: 160 SQSYVMTKGWSRFVKEKRLVAGDTVSF 186


>gi|413919134|gb|AFW59066.1| hypothetical protein ZEAMMB73_672691 [Zea mays]
          Length = 404

 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 68/152 (44%), Gaps = 5/152 (3%)

Query: 113 NYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFR 172
           + F K +T SD        +P++ AEK FP LD +       L   D     W+FR+ + 
Sbjct: 85  HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRAGKLWRFRYSYW 143

Query: 173 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWN----EKNQLLLGIRRAIRPPTVMPSSVL 228
              + +++T GWS FV  KRL AGD+V F        +++L +  R+     +  P  +L
Sbjct: 144 NSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRGAADAARDRLFIDWRKRSADSSRHPHRML 203

Query: 229 SSDSMHIGLLAAAAHAAATNSCFTVFFNPRAS 260
               +H+  LA+             FF P A+
Sbjct: 204 PRLPLHMPPLASPYGYGPWGGGAGGFFVPPAT 235


>gi|357140933|ref|XP_003572011.1| PREDICTED: putative B3 domain-containing protein Os10g0537100-like
           [Brachypodium distachyon]
          Length = 213

 Score = 58.5 bits (140), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 1/87 (1%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F K +T SD        +P++ AE+ FP LDF        L   +     W+FR+ +   
Sbjct: 7   FEKVVTPSDVGKLNRLVIPKQHAERYFP-LDFDKGNGGIILSFEERGGKAWRFRYSYWNS 65

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLF 201
            + +++T GWS FV  KRL+AGD+VLF
Sbjct: 66  SQSYVMTKGWSRFVKDKRLLAGDAVLF 92


>gi|356537192|ref|XP_003537113.1| PREDICTED: uncharacterized protein LOC100783474 [Glycine max]
          Length = 246

 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/38 (65%), Positives = 30/38 (78%)

Query: 41  VAATTNKEVDSHIPNYPNLPPQLICQLHNVTMHADVET 78
           VAA+T +   S IPNYPNLP QL+CQ+ NVT+HAD ET
Sbjct: 191 VAASTRRTTTSQIPNYPNLPYQLLCQVQNVTLHADKET 228


>gi|23308285|gb|AAN18112.1| At3g17600/MKP6_15 [Arabidopsis thaliana]
          Length = 158

 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 1/86 (1%)

Query: 678 TRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDREN 736
           T  FVKVY  G  +GR LD+  FS Y  L E L  MF       +  R    L + D++ 
Sbjct: 71  TSLFVKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGNRDRKHHVLTYEDKDG 130

Query: 737 DVLLLGDDPWEAFVSNVWYIKILSPE 762
           D +++GD PW+ F+  V  +KI  PE
Sbjct: 131 DWMMVGDIPWDMFLETVRRLKIPRPE 156


>gi|449507228|ref|XP_004162969.1| PREDICTED: uncharacterized protein LOC101232454 [Cucumis sativus]
          Length = 347

 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 60/131 (45%), Gaps = 21/131 (16%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F K +T SD        +P++ AE+ FP LD S       L   D +   W+FR+ +   
Sbjct: 57  FDKVVTPSDVGKLNRLVIPKQHAERFFP-LDSSTNDKGLLLNFEDRNGKSWRFRYSYWNS 115

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWN----EKNQLLLGIRR--------------- 215
            + +++T GWS FV  KRL AGD V F        +++L +  RR               
Sbjct: 116 SQSYVMTKGWSRFVKEKRLDAGDIVSFQRGIGEIGRDRLYIDWRRRPELPIHHYPITTAT 175

Query: 216 -AIRPPTVMPS 225
            AIRP  V+PS
Sbjct: 176 TAIRPSIVIPS 186


>gi|449456452|ref|XP_004145963.1| PREDICTED: uncharacterized protein LOC101211271 [Cucumis sativus]
          Length = 336

 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 60/131 (45%), Gaps = 21/131 (16%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F K +T SD        +P++ AE+ FP LD S       L   D +   W+FR+ +   
Sbjct: 57  FDKVVTPSDVGKLNRLVIPKQHAERFFP-LDSSTNDKGLLLNFEDRNGKSWRFRYSYWNS 115

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWN----EKNQLLLGIRR--------------- 215
            + +++T GWS FV  KRL AGD V F        +++L +  RR               
Sbjct: 116 SQSYVMTKGWSRFVKEKRLDAGDIVSFQRGIGEIGRDRLYIDWRRRPELPIHHYPITTAT 175

Query: 216 -AIRPPTVMPS 225
            AIRP  V+PS
Sbjct: 176 TAIRPSIVIPS 186


>gi|326531600|dbj|BAJ97804.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 322

 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/114 (35%), Positives = 56/114 (49%), Gaps = 7/114 (6%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F K +T SD        +P++ AEK FP LD S       L   D     W+FR+ +   
Sbjct: 40  FDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDASSTDKGLLLSFEDRAGKPWRFRYSYWNS 98

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWN----EKNQLLLGIRRAIRPPTVMP 224
            + +++T GWS FV  KRL AGD+V F        + +L +  RR  RP  V+P
Sbjct: 99  SQSYVMTKGWSRFVKEKRLDAGDTVSFGRGVGEAARGRLFIDWRR--RPDVVLP 150


>gi|297843018|ref|XP_002889390.1| hypothetical protein ARALYDRAFT_470180 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297335232|gb|EFH65649.1| hypothetical protein ARALYDRAFT_470180 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 354

 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 1/96 (1%)

Query: 106 IPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEW 165
           IP  +  + F K +T SD        +P++ AE+ FP LD S       L  +D +   W
Sbjct: 44  IPPPEKEHMFDKVVTPSDVGKLNRLVIPKQHAERYFP-LDSSNNQNGTLLNFQDRNGKMW 102

Query: 166 KFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLF 201
           +FR+ +    + +++T GWS FV  K+L AGD V F
Sbjct: 103 RFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSF 138


>gi|147768788|emb|CAN73636.1| hypothetical protein VITISV_009603 [Vitis vinifera]
          Length = 505

 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 58/117 (49%), Gaps = 7/117 (5%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F K +T SD        +P++ AEK FP LD S       L   D     W+FR+ +   
Sbjct: 112 FDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSANEKGLLLNFEDRSGKPWRFRYSYWNS 170

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLFIW----NEKNQLLLGIRRAIRPPTVMPSSV 227
            + +++T GWS FV  K+L AGD V F      + K++L +  RR  RP    PSS+
Sbjct: 171 SQSYVMTKGWSRFVKEKKLDAGDIVSFQRGVGESGKDRLYIDWRR--RPDAPEPSSL 225


>gi|297826783|ref|XP_002881274.1| indoleacetic acid-induced protein 13 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297327113|gb|EFH57533.1| indoleacetic acid-induced protein 13 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 241

 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 17/116 (14%)

Query: 681 FVKVYKSG-SVGRSLDISRFSSYNELREELGQMF--------GIEGKFEDPLR-----SG 726
           F+KV   G ++GR +D+S  SSY  L + L  MF        G+  +F  PLR     S 
Sbjct: 125 FIKVNMDGVAIGRKVDLSAHSSYENLSQTLEDMFFRTNPGTIGLTSQFTKPLRLLDGSSE 184

Query: 727 WQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQR 782
           + L + D+E D +L+GD PW  F+++V  ++++   +   +  +  E   P+  QR
Sbjct: 185 FVLTYEDKEGDWMLVGDVPWRMFITSVKRLRVMKTSEANGLAARNQE---PNERQR 237


>gi|195635917|gb|ACG37427.1| IAA7 - auxin-responsive Aux/IAA family member [Zea mays]
          Length = 289

 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 22/120 (18%)

Query: 667 HNVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMF-GIEGKFEDPLR 724
               + +Q T    FVK+   G  +GR +D+S   SY+EL   + ++F G+    +DPL 
Sbjct: 148 KKAAKPEQTTKRAPFVKINMDGIPIGRKIDLSALGSYDELSLSVDKLFRGLLAAQQDPLA 207

Query: 725 SG--------------------WQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDV 764
           +G                    + LV+ D E D +L+GD PW  FVS+V  +++L   D+
Sbjct: 208 AGAKECSQEEVAISGLLDGTGEYTLVYEDYEGDRVLVGDVPWGMFVSSVKRLRVLKTSDL 267


>gi|356571279|ref|XP_003553806.1| PREDICTED: B3 domain-containing transcription factor NGA1-like
           [Glycine max]
          Length = 413

 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 1/92 (1%)

Query: 110 QPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRH 169
           +  N F K +T SD        +P++ AEK FP LD S       L   D +   W+FR+
Sbjct: 85  EKENMFEKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSSNEKGLLLNFEDRNGKVWRFRY 143

Query: 170 IFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLF 201
            +    + +++T GWS FV  K+L AGD V F
Sbjct: 144 SYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSF 175


>gi|225426506|ref|XP_002271695.1| PREDICTED: B3 domain-containing protein Os03g0120900-like [Vitis
           vinifera]
          Length = 411

 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 58/117 (49%), Gaps = 7/117 (5%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F K +T SD        +P++ AEK FP LD S       L   D     W+FR+ +   
Sbjct: 112 FDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSANEKGLLLNFEDRSGKPWRFRYSYWNS 170

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLFIW----NEKNQLLLGIRRAIRPPTVMPSSV 227
            + +++T GWS FV  K+L AGD V F      + K++L +  RR  RP    PSS+
Sbjct: 171 SQSYVMTKGWSRFVKEKKLDAGDIVSFQRGVGESGKDRLYIDWRR--RPDAPEPSSL 225


>gi|356498733|ref|XP_003518204.1| PREDICTED: B3 domain-containing protein At5g06250-like [Glycine
           max]
          Length = 344

 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 64/130 (49%), Gaps = 7/130 (5%)

Query: 106 IPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFP---SLDFSLQPPAQELIARDLHD 162
           I +K+P   F K LT SD        +P++ AEK FP       S +     L   D   
Sbjct: 68  INNKEPM--FEKPLTPSDVGKLNRLVIPKQHAEKYFPLSGGDSGSSECKGLLLSFEDESG 125

Query: 163 VEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKN--QLLLGIRRAIRPP 220
             W+FR+ +    + ++LT GWS +V  KRL AGD VLF  +  +  +L +G RR  +  
Sbjct: 126 KCWRFRYSYWNSSQSYVLTKGWSRYVKDKRLDAGDVVLFQRHRADAQRLFIGWRRRRQSD 185

Query: 221 TVMPSSVLSS 230
            + P + +SS
Sbjct: 186 ALPPPAHVSS 195


>gi|304308105|gb|ADL70365.1| auxin response factor 9 [Arabidopsis thaliana]
 gi|304308127|gb|ADL70376.1| auxin response factor 9 [Arabidopsis thaliana]
          Length = 230

 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/65 (41%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 300 YMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL 359
           Y GT+ G+ D  P  W +S WR ++V WDE  +  R  +VS WEIEP       P    L
Sbjct: 1   YSGTVIGVKDCSP-HWKDSKWRCLEVHWDEPASTSRPNKVSPWEIEPFVNSENVPKSVML 59

Query: 360 RLKRP 364
           + KRP
Sbjct: 60  KNKRP 64


>gi|302398541|gb|ADL36565.1| ABI3L domain class transcription factor [Malus x domestica]
          Length = 382

 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/105 (38%), Positives = 52/105 (49%), Gaps = 9/105 (8%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFP--SLDFSLQPPAQELIARDLHDVEWKFRHIFR 172
           F K LT SD        +P++ AEK FP  S D  L      L   D     W+FR+ + 
Sbjct: 122 FEKPLTPSDVGKLNRLVIPKQHAEKYFPLGSGDSGLL-----LSFEDESGKSWRFRYSYW 176

Query: 173 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKN--QLLLGIRR 215
              + ++LT GWS +V  KRL AGD VLF     N  +L +G RR
Sbjct: 177 NSSQSYVLTKGWSRYVKEKRLNAGDVVLFERRRANTDRLSIGWRR 221


>gi|223943565|gb|ACN25866.1| unknown [Zea mays]
 gi|413936690|gb|AFW71241.1| IAA7-auxin-responsive Aux/IAA family member [Zea mays]
          Length = 289

 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 22/114 (19%)

Query: 673 DQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMF-GIEGKFEDPLRSG---- 726
           +Q T    FVK+   G  +GR +D+S   SY+EL   + ++F G+    +DPL +G    
Sbjct: 154 EQTTKRAPFVKINMDGIPIGRKIDLSALGSYDELSLSVDKLFRGLLAAQQDPLAAGAKEC 213

Query: 727 ----------------WQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDV 764
                           + LV+ D E D +L+GD PW  FVS+V  +++L   D+
Sbjct: 214 SQEEVAISGLLDGTGEYTLVYEDYEGDRVLVGDVPWGMFVSSVKRLRVLKTSDL 267


>gi|302822962|ref|XP_002993136.1| hypothetical protein SELMODRAFT_431277 [Selaginella moellendorffii]
 gi|300139027|gb|EFJ05776.1| hypothetical protein SELMODRAFT_431277 [Selaginella moellendorffii]
          Length = 124

 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 42/63 (66%), Gaps = 3/63 (4%)

Query: 681 FVKVYKSGSVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 740
           F KV+K  +VGR+LD+S+F  Y +L EE   +FGI+   E+   S WQ ++VD E D+L 
Sbjct: 13  FSKVHKHNAVGRALDLSKFRGYTQLLEEPQHLFGID---ENLNESEWQAMYVDNEGDMLF 69

Query: 741 LGD 743
           +G+
Sbjct: 70  VGE 72


>gi|323388567|gb|ADX60088.1| AUX/IAA transcription factor [Zea mays]
          Length = 289

 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 22/114 (19%)

Query: 673 DQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMF-GIEGKFEDPLRSG---- 726
           +Q T    FVK+   G  +GR +D+S   SY+EL   + ++F G+    +DPL +G    
Sbjct: 154 EQTTKRAPFVKINMDGIPIGRKIDLSALGSYDELSLSVDKLFRGLLAAQQDPLAAGAKEC 213

Query: 727 ----------------WQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDV 764
                           + LV+ D E D +L+GD PW  FVS+V  +++L   D+
Sbjct: 214 SQEEVAISGLLDGTGEYTLVYEDYEGDRVLVGDVPWGMFVSSVKRLRVLKTSDL 267


>gi|414585760|tpg|DAA36331.1| TPA: hypothetical protein ZEAMMB73_124394 [Zea mays]
          Length = 409

 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 1/87 (1%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F K +T SD        +P++ AEK FP LD +     Q L   D     W+FR+ +   
Sbjct: 94  FDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGQLLSFEDRAGKLWRFRYSYWNS 152

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLF 201
            + +++T GWS FV  KRL AGD+V F
Sbjct: 153 SQSYVMTKGWSRFVKEKRLDAGDTVSF 179


>gi|297742476|emb|CBI34625.3| unnamed protein product [Vitis vinifera]
          Length = 380

 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 58/117 (49%), Gaps = 7/117 (5%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F K +T SD        +P++ AEK FP LD S       L   D     W+FR+ +   
Sbjct: 157 FDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSANEKGLLLNFEDRSGKPWRFRYSYWNS 215

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLFIW----NEKNQLLLGIRRAIRPPTVMPSSV 227
            + +++T GWS FV  K+L AGD V F      + K++L +  RR  RP    PSS+
Sbjct: 216 SQSYVMTKGWSRFVKEKKLDAGDIVSFQRGVGESGKDRLYIDWRR--RPDAPEPSSL 270


>gi|125552982|gb|EAY98691.1| hypothetical protein OsI_20621 [Oryza sativa Indica Group]
          Length = 102

 Score = 57.4 bits (137), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/77 (41%), Positives = 43/77 (55%), Gaps = 4/77 (5%)

Query: 11 ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNV 70
          ELWHACAGP V+LP  G+ +VY PQ H     A      +        +PP + C++  V
Sbjct: 23 ELWHACAGPGVALPRRGSALVYLPQAH----LAADGGGGEVPPAGAAAVPPHVACRVVGV 78

Query: 71 TMHADVETDEVYAQMTL 87
           + AD  TDEVYA++ L
Sbjct: 79 ELRADAATDEVYARLAL 95


>gi|357165429|ref|XP_003580380.1| PREDICTED: B3 domain-containing protein Os02g0683500-like
           [Brachypodium distachyon]
          Length = 413

 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 60/127 (47%), Gaps = 16/127 (12%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F K +T SD        +P++ AEK FP LD +       L   D     W+FR+ +   
Sbjct: 100 FDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSAANEKGLLLSFEDRTGKLWRFRYSYWNS 158

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSV-------------LFI-WNEKNQLLLGIRRAI-RP 219
            + +++T GWS FV  KRL AGD+V             LFI W  + +L+    R + R 
Sbjct: 159 SQSYVMTKGWSRFVKEKRLDAGDTVSFCRGAAEATRDRLFIDWKRRAELIRDPHRGLARL 218

Query: 220 PTVMPSS 226
           P  MP+S
Sbjct: 219 PMPMPTS 225


>gi|304308125|gb|ADL70375.1| auxin response factor 9 [Arabidopsis thaliana]
          Length = 230

 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 300 YMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL 359
           Y GT+ G+ D  P  W +S WR ++V WDE  +  R  +VS WEIEP  +    P    L
Sbjct: 1   YSGTVIGVKDCSP-HWKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVSSENIPKSVML 59

Query: 360 RLKRP 364
           + KRP
Sbjct: 60  KNKRP 64


>gi|414864444|tpg|DAA43001.1| TPA: hypothetical protein ZEAMMB73_938349 [Zea mays]
          Length = 327

 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 54/112 (48%), Gaps = 5/112 (4%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F K +T SD        +P++ AE+ FP LD +       L   D     W+FR+ +   
Sbjct: 38  FDKVVTPSDVGKLNRLVIPKQHAERYFP-LDAAANDKGLLLSFEDRAGKPWRFRYSYWNS 96

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWN----EKNQLLLGIRRAIRPPTV 222
            + +++T GWS FV  KRL AGD+V F        + +L +  RR   PP V
Sbjct: 97  SQSYVMTKGWSRFVKEKRLDAGDTVSFGRGVGEAARGRLFIDWRRRPDPPVV 148


>gi|75139062|sp|Q7EZD5.1|Y8577_ORYSJ RecName: Full=Putative B3 domain-containing protein Os08g0157700
 gi|37806146|dbj|BAC99651.1| AP2 domain protein RAP2.8 (RAV2)-like [Oryza sativa Japonica Group]
 gi|125602248|gb|EAZ41573.1| hypothetical protein OsJ_26107 [Oryza sativa Japonica Group]
          Length = 287

 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 52/111 (46%), Gaps = 5/111 (4%)

Query: 108 SKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKF 167
           + +  + F K +T SD        VP++ AE+ FP+          +L   D     W+F
Sbjct: 64  AAEREHMFDKVVTPSDVGKLNRLVVPKQHAERFFPA-----AAAGTQLCFEDRAGTPWRF 118

Query: 168 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR 218
           R+ + G  + +++T GWS FV A RL AGD+V F      +  +  R   R
Sbjct: 119 RYSYWGSSQSYVMTKGWSRFVRAARLSAGDTVSFSRAADGRYFIDYRHCHR 169


>gi|125560208|gb|EAZ05656.1| hypothetical protein OsI_27883 [Oryza sativa Indica Group]
          Length = 286

 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 52/111 (46%), Gaps = 5/111 (4%)

Query: 108 SKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKF 167
           + +  + F K +T SD        VP++ AE+ FP+          +L   D     W+F
Sbjct: 64  AAEREHMFDKVVTPSDVGKLNRLVVPKQHAERFFPA-----AAAGTQLCFEDRAGTPWRF 118

Query: 168 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIR 218
           R+ + G  + +++T GWS FV A RL AGD+V F      +  +  R   R
Sbjct: 119 RYSYWGSSQSYVMTKGWSRFVRAARLSAGDTVSFSRAADGRYFIDYRHCHR 169


>gi|284811249|gb|ADB96363.1| auxin response factor 9 [Arabidopsis thaliana]
 gi|284811251|gb|ADB96364.1| auxin response factor 9 [Arabidopsis thaliana]
 gi|284811253|gb|ADB96365.1| auxin response factor 9 [Arabidopsis thaliana]
 gi|284811257|gb|ADB96367.1| auxin response factor 9 [Arabidopsis thaliana]
 gi|304308107|gb|ADL70366.1| auxin response factor 9 [Arabidopsis thaliana]
 gi|304308111|gb|ADL70368.1| auxin response factor 9 [Arabidopsis thaliana]
 gi|304308113|gb|ADL70369.1| auxin response factor 9 [Arabidopsis thaliana]
 gi|304308115|gb|ADL70370.1| auxin response factor 9 [Arabidopsis thaliana]
 gi|304308117|gb|ADL70371.1| auxin response factor 9 [Arabidopsis thaliana]
 gi|304308119|gb|ADL70372.1| auxin response factor 9 [Arabidopsis thaliana]
 gi|304308121|gb|ADL70373.1| auxin response factor 9 [Arabidopsis thaliana]
 gi|304308123|gb|ADL70374.1| auxin response factor 9 [Arabidopsis thaliana]
 gi|304308129|gb|ADL70377.1| auxin response factor 9 [Arabidopsis thaliana]
          Length = 230

 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/65 (41%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 300 YMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL 359
           Y GT+ G+ D  P  W +S WR ++V WDE  +  R  +VS WEIEP       P    L
Sbjct: 1   YSGTVIGVKDCSP-HWKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVNSENVPKSVML 59

Query: 360 RLKRP 364
           + KRP
Sbjct: 60  KNKRP 64


>gi|226504810|ref|NP_001149696.1| IAA12 - auxin-responsive Aux/IAA family member [Zea mays]
 gi|195629558|gb|ACG36420.1| IAA12 - auxin-responsive Aux/IAA family member [Zea mays]
          Length = 223

 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 1/89 (1%)

Query: 681 FVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVL 739
           FVKV   G+   R LD+  +  Y ELRE L  MF   G   D   S + + + D++ D++
Sbjct: 131 FVKVSMDGAPYLRKLDLRMYKGYRELREALEAMFVSSGSANDKNLSEFAVTYQDKDGDLM 190

Query: 740 LLGDDPWEAFVSNVWYIKILSPEDVQKMG 768
           L+GD P+E F S    ++I+   +   +G
Sbjct: 191 LVGDVPFEMFASTCRKLRIMKRSEATGLG 219


>gi|30685642|ref|NP_850205.1| auxin-responsive protein IAA13 [Arabidopsis thaliana]
 gi|38503400|sp|Q38831.2|IAA13_ARATH RecName: Full=Auxin-responsive protein IAA13; AltName:
           Full=Indoleacetic acid-induced protein 13
 gi|29028860|gb|AAO64809.1| At2g33310 [Arabidopsis thaliana]
 gi|110742999|dbj|BAE99393.1| auxin regulated protein [Arabidopsis thaliana]
 gi|330253719|gb|AEC08813.1| auxin-responsive protein IAA13 [Arabidopsis thaliana]
          Length = 247

 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 60/116 (51%), Gaps = 17/116 (14%)

Query: 681 FVKVYKSG-SVGRSLDISRFSSYNELREELGQMF--------GIEGKFEDPLR-----SG 726
           F+KV   G ++GR +D++  SSY  L + L  MF        G+  +F  PLR     S 
Sbjct: 131 FIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSE 190

Query: 727 WQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQR 782
           + L + D+E D +L+GD PW  F+++V  ++++   +   +  +  E   P+  QR
Sbjct: 191 FVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLAARNQE---PNERQR 243


>gi|15225833|ref|NP_180889.1| auxin-responsive protein IAA13 [Arabidopsis thaliana]
 gi|186504957|ref|NP_001118434.1| auxin-responsive protein IAA13 [Arabidopsis thaliana]
 gi|12083208|gb|AAG48763.1|AF332399_1 auxin-regulated protein IAA13 [Arabidopsis thaliana]
 gi|972929|gb|AAC49054.1| IAA13 [Arabidopsis thaliana]
 gi|2459414|gb|AAB80649.1| auxin regulated protein (IAA13) [Arabidopsis thaliana]
 gi|21537404|gb|AAM61745.1| auxin regulated protein IAA13 [Arabidopsis thaliana]
 gi|330253718|gb|AEC08812.1| auxin-responsive protein IAA13 [Arabidopsis thaliana]
 gi|330253720|gb|AEC08814.1| auxin-responsive protein IAA13 [Arabidopsis thaliana]
          Length = 246

 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 60/116 (51%), Gaps = 17/116 (14%)

Query: 681 FVKVYKSG-SVGRSLDISRFSSYNELREELGQMF--------GIEGKFEDPLR-----SG 726
           F+KV   G ++GR +D++  SSY  L + L  MF        G+  +F  PLR     S 
Sbjct: 130 FIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSE 189

Query: 727 WQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVESFSPSSGQR 782
           + L + D+E D +L+GD PW  F+++V  ++++   +   +  +  E   P+  QR
Sbjct: 190 FVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTSEANGLAARNQE---PNERQR 242


>gi|225453662|ref|XP_002268399.1| PREDICTED: B3 domain-containing transcription factor NGA1-like
           [Vitis vinifera]
          Length = 461

 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 58/117 (49%), Gaps = 7/117 (5%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F K +T SD        +P++ AEK FP LD S       L   D     W+FR+ +   
Sbjct: 139 FDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSASDKGLLLNFEDRDGKPWRFRYSYWNS 197

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLFIW----NEKNQLLLGIRRAIRPPTVMPSSV 227
            + +++T GWS FV  K+L AGD V F      + K++L +  RR  RP    P+S+
Sbjct: 198 SQSYVMTKGWSRFVKEKKLDAGDIVSFERGVGESGKDRLYIDWRR--RPDAPDPTSL 252


>gi|449457654|ref|XP_004146563.1| PREDICTED: B3 domain-containing transcription factor NGA1-like
           [Cucumis sativus]
          Length = 345

 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 54/109 (49%), Gaps = 6/109 (5%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F K +T SD        +P++ AEK FP LD S       L   D     W+FR+ +   
Sbjct: 67  FDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSSNEKGLLLNFEDRCGKLWRFRYSYWTS 125

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLF---IWNEKNQLLLGIRRAIRPP 220
            + +++T GWS FV  KRL AGD V F   +   +++  +  RR  RPP
Sbjct: 126 SQSYVMTKGWSRFVKDKRLDAGDIVSFQRPLHRNQDRFFIDWRR--RPP 172


>gi|304308109|gb|ADL70367.1| auxin response factor 9 [Arabidopsis thaliana]
          Length = 230

 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 27/65 (41%), Positives = 34/65 (52%), Gaps = 1/65 (1%)

Query: 300 YMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL 359
           Y GT+ G+ D  P  W +S WR ++V WDE     R  +VS WEIEP       P    L
Sbjct: 1   YSGTVIGVKDCSP-HWKDSKWRCLEVHWDEPATISRPNKVSPWEIEPFVNSENVPKSVML 59

Query: 360 RLKRP 364
           + KRP
Sbjct: 60  KNKRP 64


>gi|225432228|ref|XP_002275515.1| PREDICTED: auxin-responsive protein IAA31 [Vitis vinifera]
 gi|297736834|emb|CBI26035.3| unnamed protein product [Vitis vinifera]
          Length = 198

 Score = 56.6 bits (135), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 35/94 (37%), Positives = 48/94 (51%), Gaps = 8/94 (8%)

Query: 673 DQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQ--- 728
           +Q   T  FVKVY  G S+GR LD+  +S Y+ L   L  MF       DP   G     
Sbjct: 99  NQRQATNLFVKVYMEGISIGRKLDLFAYSGYDGLVATLSHMFKTTIFCSDPHVGGADHSG 158

Query: 729 ----LVFVDRENDVLLLGDDPWEAFVSNVWYIKI 758
               L + D+E D +++GD PWE F++ V  +KI
Sbjct: 159 KYHILTYEDKEGDWMMVGDVPWEMFLTTVKRLKI 192


>gi|297738985|emb|CBI28230.3| unnamed protein product [Vitis vinifera]
          Length = 184

 Score = 56.6 bits (135), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 38/100 (38%), Positives = 52/100 (52%), Gaps = 9/100 (9%)

Query: 665 LLHN----VGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKF 719
           +LHN     G    + P   +VKV   G  + R +D+SR  SY  L   L  MFG   K 
Sbjct: 85  VLHNGSARAGVGGGVNPNSKYVKVKMVGVGIARKIDLSRHHSYQTLTNTLINMFG---KC 141

Query: 720 EDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKIL 759
           +   +S ++L + DRE D LL GD PW  F+ +V  +KIL
Sbjct: 142 QQDAQS-FKLAYQDREGDWLLAGDVPWRTFIQSVERLKIL 180


>gi|356503831|ref|XP_003520706.1| PREDICTED: B3 domain-containing protein At2g36080-like [Glycine
           max]
          Length = 276

 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 42/120 (35%), Positives = 60/120 (50%), Gaps = 6/120 (5%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIA--RDLHDVEWKFRHIFR 172
           F K LT SD        +P++ AEK FP LD S    A+ L+    D     W+FR+ + 
Sbjct: 56  FEKPLTPSDVGKLNRLVIPKQHAEKHFP-LDSSA---AKGLLLSFEDESGKCWRFRYSYW 111

Query: 173 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPPTVMPSSVLSSDS 232
              + ++LT GWS +V  KRL AGD VLF  +        I  + R P  +P+ V ++ S
Sbjct: 112 NSSQSYVLTKGWSRYVKDKRLHAGDVVLFHRHRSLPQRFFISCSRRQPNPVPAHVSTTRS 171


>gi|242035245|ref|XP_002465017.1| hypothetical protein SORBIDRAFT_01g030520 [Sorghum bicolor]
 gi|241918871|gb|EER92015.1| hypothetical protein SORBIDRAFT_01g030520 [Sorghum bicolor]
          Length = 274

 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 52/105 (49%), Gaps = 8/105 (7%)

Query: 105 GIPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQE--------LI 156
           G+   +  + F K +T SD        +P++ AE+ FP+LD S    A          L 
Sbjct: 20  GVAWVEKEHMFEKVVTPSDVGKLNRLVIPKQHAERYFPALDASAAAAAAAAGGGKGLVLS 79

Query: 157 ARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLF 201
             D     W+FR+ +    + +++T GWS FV  KRL AGD+VLF
Sbjct: 80  FEDRAGKAWRFRYSYWNSSQSYVMTKGWSRFVKEKRLGAGDTVLF 124


>gi|296089028|emb|CBI38731.3| unnamed protein product [Vitis vinifera]
          Length = 375

 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 58/117 (49%), Gaps = 7/117 (5%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F K +T SD        +P++ AEK FP LD S       L   D     W+FR+ +   
Sbjct: 95  FDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSASDKGLLLNFEDRDGKPWRFRYSYWNS 153

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLFIW----NEKNQLLLGIRRAIRPPTVMPSSV 227
            + +++T GWS FV  K+L AGD V F      + K++L +  RR  RP    P+S+
Sbjct: 154 SQSYVMTKGWSRFVKEKKLDAGDIVSFERGVGESGKDRLYIDWRR--RPDAPDPTSL 208


>gi|194475604|gb|ACF74549.1| RAV [Nicotiana tabacum]
          Length = 385

 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 54/113 (47%), Gaps = 3/113 (2%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F K +T SD        +P++ AEK FP L          L   DL+   W+FR+ +   
Sbjct: 198 FEKAVTPSDVGKLNRLVIPKQHAEKHFP-LQNGNTSKGVLLNFEDLNGKVWRFRYSYWNS 256

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWN--EKNQLLLGIRRAIRPPTVMPS 225
            + ++LT GWS FV  K L AGD V F  +  E  QL +  +     PT+ P+
Sbjct: 257 SQSYVLTKGWSRFVKEKNLKAGDIVSFQRSTGEDKQLYIDFKARNATPTISPT 309


>gi|225445577|ref|XP_002285354.1| PREDICTED: auxin-responsive protein IAA29-like [Vitis vinifera]
          Length = 224

 Score = 55.8 bits (133), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 38/100 (38%), Positives = 52/100 (52%), Gaps = 9/100 (9%)

Query: 665 LLHN----VGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKF 719
           +LHN     G    + P   +VKV   G  + R +D+SR  SY  L   L  MFG   K 
Sbjct: 125 VLHNGSARAGVGGGVNPNSKYVKVKMVGVGIARKIDLSRHHSYQTLTNTLINMFG---KC 181

Query: 720 EDPLRSGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKIL 759
           +   +S ++L + DRE D LL GD PW  F+ +V  +KIL
Sbjct: 182 QQDAQS-FKLAYQDREGDWLLAGDVPWRTFIQSVERLKIL 220


>gi|255579355|ref|XP_002530522.1| transcription factor, putative [Ricinus communis]
 gi|223529926|gb|EEF31854.1| transcription factor, putative [Ricinus communis]
          Length = 373

 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 11/107 (10%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFP----SLDFSLQPPAQELIARDLHDVEWKFRHI 170
           F K LT SD        +P++ AEK FP    S+D  L    ++ + +      W+FR+ 
Sbjct: 137 FEKPLTPSDVGKLNRLVIPKQHAEKYFPLGGDSVDKGLLLSFEDELGKC-----WRFRYS 191

Query: 171 FRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWN--EKNQLLLGIRR 215
           +    + ++LT GWS +V  K+L AGD VLF  +  +  +L +G RR
Sbjct: 192 YWNSSQSYVLTKGWSRYVKDKQLDAGDVVLFERHRLDGERLFIGWRR 238


>gi|242042451|ref|XP_002468620.1| hypothetical protein SORBIDRAFT_01g049150 [Sorghum bicolor]
 gi|241922474|gb|EER95618.1| hypothetical protein SORBIDRAFT_01g049150 [Sorghum bicolor]
          Length = 330

 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 53/111 (47%), Gaps = 5/111 (4%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F K +T SD        +P++ AEK FP LD +       L   D     W+FR+ +   
Sbjct: 39  FDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRTGKPWRFRYSYWNS 97

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWN----EKNQLLLGIRRAIRPPT 221
            + +++T GWS FV  KRL AGD+V F        + +L +  RR   PP 
Sbjct: 98  SQSYVMTKGWSRFVKEKRLDAGDTVSFGRGVGDAARGRLFIDWRRRPDPPV 148


>gi|356522464|ref|XP_003529866.1| PREDICTED: B3 domain-containing protein Os03g0120900-like [Glycine
           max]
          Length = 421

 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 1/87 (1%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F K +T SD        +P++ AEK FP LD S       L   D +   W+FR+ +   
Sbjct: 61  FDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSANEKGLLLNFEDRNGKLWRFRYSYWNS 119

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLF 201
            + +++T GWS FV  K+L AGD V F
Sbjct: 120 SQSYVMTKGWSRFVKEKKLDAGDMVSF 146


>gi|255548087|ref|XP_002515100.1| hypothetical protein RCOM_1340820 [Ricinus communis]
 gi|223545580|gb|EEF47084.1| hypothetical protein RCOM_1340820 [Ricinus communis]
          Length = 450

 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 58/116 (50%), Gaps = 7/116 (6%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F K +T SD        +P++ AEK FP LD S       L   D +   W+FR+ +   
Sbjct: 125 FDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSSNEKGLLLNFEDRNGKLWRFRYSYWNS 183

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLFIW----NEKNQLLLGIRRAIRPPTVMPSS 226
            + +++T GWS FV  K+L AGD V F      + K++L +  RR  RP    P+S
Sbjct: 184 SQSYVMTKGWSRFVKEKKLDAGDIVSFQRGVGESGKHRLYIDWRR--RPNAPDPTS 237


>gi|115450383|ref|NP_001048792.1| Os03g0120900 [Oryza sativa Japonica Group]
 gi|75246354|sp|Q8LMR9.1|Y3209_ORYSJ RecName: Full=B3 domain-containing protein Os03g0120900
 gi|21426118|gb|AAM52315.1|AC105363_4 Putative RAV-like B3 domain DNA binding protein [Oryza sativa
           Japonica Group]
 gi|108705902|gb|ABF93697.1| B3 DNA binding domain containing protein, expressed [Oryza sativa
           Japonica Group]
 gi|113547263|dbj|BAF10706.1| Os03g0120900 [Oryza sativa Japonica Group]
          Length = 311

 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 62/128 (48%), Gaps = 16/128 (12%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F K +T SD        +P++ AEK FP LD +       L   D     W+FR+ +   
Sbjct: 37  FDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAASNEKGLLLSFEDRTGKPWRFRYSYWNS 95

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWN----EKNQLLLGIRR------AIRPPT--- 221
            + +++T GWS FV  KRL AGD+V F        + +L +  RR      A++PPT   
Sbjct: 96  SQSYVMTKGWSRFVKEKRLDAGDTVSFGRGVGEAARGRLFIDWRRRPDVVAALQPPTHRF 155

Query: 222 --VMPSSV 227
              +PSS+
Sbjct: 156 AHHLPSSI 163


>gi|255555825|ref|XP_002518948.1| transcription factor, putative [Ricinus communis]
 gi|223541935|gb|EEF43481.1| transcription factor, putative [Ricinus communis]
          Length = 406

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 56/120 (46%), Gaps = 5/120 (4%)

Query: 110 QPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRH 169
           Q  + F K +T SD        +P++ AEK FP LD S       L   D     W+FR+
Sbjct: 98  QKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSTNDKGLLLNFEDKTGKAWRFRY 156

Query: 170 IFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWN----EKNQLLLGIRRAIRPPTVMPS 225
            +    + +++T GWS FV  K+L AGD V F        K++L +  RR    P   P+
Sbjct: 157 SYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRGVGEAAKDRLYIDWRRRPDGPHHQPT 216


>gi|125542174|gb|EAY88313.1| hypothetical protein OsI_09772 [Oryza sativa Indica Group]
          Length = 308

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 62/128 (48%), Gaps = 16/128 (12%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F K +T SD        +P++ AEK FP LD +       L   D     W+FR+ +   
Sbjct: 37  FDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAASNEKGLLLSFEDRTGKPWRFRYSYWNS 95

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWN----EKNQLLLGIRR------AIRPPT--- 221
            + +++T GWS FV  KRL AGD+V F        + +L +  RR      A++PPT   
Sbjct: 96  SQSYVMTKGWSRFVKEKRLDAGDTVSFGRGVGEAARGRLFIDWRRRPDVVAALQPPTHRF 155

Query: 222 --VMPSSV 227
              +PSS+
Sbjct: 156 AHHLPSSI 163


>gi|18407193|ref|NP_566089.1| B3 domain-containing transcription factor NGA1 [Arabidopsis
           thaliana]
 gi|75100798|sp|O82799.1|NGA1_ARATH RecName: Full=B3 domain-containing transcription factor NGA1;
           AltName: Full=Protein NGATHA 1
 gi|3522951|gb|AAC34233.1| putative RAV-like B3 domain DNA binding protein [Arabidopsis
           thaliana]
 gi|20197317|gb|AAM15018.1| putative RAV-like B3 domain DNA binding protein [Arabidopsis
           thaliana]
 gi|26451145|dbj|BAC42676.1| putative RAV-like B3 domain DNA binding protein [Arabidopsis
           thaliana]
 gi|30793817|gb|AAP40361.1| putative RAV B3 domain DNA binding protein [Arabidopsis thaliana]
 gi|330255671|gb|AEC10765.1| B3 domain-containing transcription factor NGA1 [Arabidopsis
           thaliana]
          Length = 310

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 1/87 (1%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F K +T SD        +P++ AE+ FP LD S       L   DL    W+FR+ +   
Sbjct: 35  FDKVVTPSDVGKLNRLVIPKQHAERFFP-LDSSSNEKGLLLNFEDLTGKSWRFRYSYWNS 93

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLF 201
            + +++T GWS FV  K+L AGD V F
Sbjct: 94  SQSYVMTKGWSRFVKDKKLDAGDIVSF 120


>gi|356504205|ref|XP_003520889.1| PREDICTED: B3 domain-containing transcription factor NGA1-like
           [Glycine max]
          Length = 420

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 1/87 (1%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F K  T SD        +P++ AEK FP LD S       L   D +   W+FR+ +   
Sbjct: 88  FEKVATPSDVGKLNRLVIPKQHAEKYFP-LDSSTNEKGLLLNFEDRNGKVWRFRYSYWNS 146

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLF 201
            + +++T GWS FV  K+L AGD V F
Sbjct: 147 SQSYVMTKGWSRFVKEKKLDAGDIVSF 173


>gi|227060666|gb|ACP18971.1| NGATHA1 [Arabidopsis thaliana]
          Length = 310

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 1/87 (1%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F K +T SD        +P++ AE+ FP LD S       L   DL    W+FR+ +   
Sbjct: 35  FDKVVTPSDVGKLNRLVIPKQHAERFFP-LDSSSNEKGLLLNFEDLTGKSWRFRYSYWNS 93

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLF 201
            + +++T GWS FV  K+L AGD V F
Sbjct: 94  SQSYVMTKGWSRFVKDKKLDAGDIVSF 120


>gi|297789622|ref|XP_002862757.1| hypothetical protein ARALYDRAFT_497309 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297308467|gb|EFH39015.1| hypothetical protein ARALYDRAFT_497309 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 312

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 1/87 (1%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F K +T SD        +P++ AE+ FP LD S       L   DL    W+FR+ +   
Sbjct: 37  FDKVVTPSDVGKLNRLVIPKQHAERFFP-LDSSSNEKGLLLNFEDLTGKSWRFRYSYWNS 95

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLF 201
            + +++T GWS FV  K+L AGD V F
Sbjct: 96  SQSYVMTKGWSRFVKDKKLDAGDIVSF 122


>gi|238013004|gb|ACR37537.1| unknown [Zea mays]
          Length = 82

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 3/55 (5%)

Query: 719 FEDPLRSG---WQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQ 770
           FE  L SG   WQ+V+ D E D++L+GDDPWE F S V  I I + E+VQKM  +
Sbjct: 4   FEGELVSGSQNWQIVYTDDEGDMMLVGDDPWEEFCSIVRKIYIYTKEEVQKMNSK 58


>gi|291197510|emb|CAZ68123.1| NGATHA1 [Arabidopsis halleri subsp. halleri]
          Length = 313

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 1/87 (1%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F K +T SD        +P++ AE+ FP LD S       L   DL    W+FR+ +   
Sbjct: 37  FDKVVTPSDVGKLNRLVIPKQHAERFFP-LDSSSNEKGLLLNFEDLTGKSWRFRYSYWNS 95

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLF 201
            + +++T GWS FV  K+L AGD V F
Sbjct: 96  SQSYVMTKGWSRFVKDKKLDAGDIVSF 122


>gi|297824777|ref|XP_002880271.1| hypothetical protein ARALYDRAFT_483854 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297326110|gb|EFH56530.1| hypothetical protein ARALYDRAFT_483854 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 311

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 1/87 (1%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F K +T SD        +P++ AE+ FP LD S       L   DL    W+FR+ +   
Sbjct: 36  FDKVVTPSDVGKLNRLVIPKQHAERFFP-LDSSSNEKGLLLNFEDLTGKSWRFRYSYWNS 94

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLF 201
            + +++T GWS FV  K+L AGD V F
Sbjct: 95  SQSYVMTKGWSRFVKDKKLDAGDIVSF 121


>gi|413949070|gb|AFW81719.1| hypothetical protein ZEAMMB73_752087 [Zea mays]
          Length = 259

 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 55/114 (48%), Gaps = 5/114 (4%)

Query: 113 NYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFR 172
           + F K +T SD        +P++ AEK FP LD +       L   D     W+FR+ + 
Sbjct: 38  HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRTGKPWRFRYSYW 96

Query: 173 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWN----EKNQLLLGIRRAIRPPTV 222
              + +++T GWS FV  KRL AGD+V F        +++L +  R    PP V
Sbjct: 97  NSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRGISEAARDRLFIDWRCRPDPPVV 150


>gi|326491285|dbj|BAK05742.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 397

 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 14/127 (11%)

Query: 113 NYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFR 172
           + F K +T SD        +P++ AEK FP LD +       L   D     W+FR+ + 
Sbjct: 88  HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRGGKLWRFRYSYW 146

Query: 173 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNE----KNQLLLGIRRAI---------RP 219
              + +++T GWS FV  KRL AGD+V F        +++L +  +R +         R 
Sbjct: 147 NSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRGAADATRDRLFIDWKRRVELRDPHRLARL 206

Query: 220 PTVMPSS 226
           P  MP+S
Sbjct: 207 PMPMPTS 213


>gi|365818565|gb|AEX00371.1| IAA36 [Solanum lycopersicum]
          Length = 242

 Score = 55.1 bits (131), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 6/95 (6%)

Query: 667 HNVGQIDQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRS 725
           HN+G  + +     +VKV   G ++GR +D+  ++SY  L   L QMF    +  D    
Sbjct: 135 HNIGIRNSM-----YVKVKMEGVAIGRKIDLMLYNSYQILTNTLLQMFNKSHESCDENDG 189

Query: 726 GWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILS 760
            + L++ D+E D +L GD PWE F+  V  I+ILS
Sbjct: 190 RFTLLYQDKEGDWMLAGDVPWETFMETVQRIQILS 224


>gi|356560217|ref|XP_003548390.1| PREDICTED: B3 domain-containing transcription factor NGA1-like
           [Glycine max]
          Length = 420

 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 1/87 (1%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F K +T SD        +P++ AEK FP LD S       L   D +   W+FR+ +   
Sbjct: 33  FDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSANEKGLLLNFEDRNGKLWRFRYSYWNS 91

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLF 201
            + +++T GWS FV  K+L AGD V F
Sbjct: 92  SQSYVMTKGWSRFVKEKKLDAGDIVSF 118


>gi|284811255|gb|ADB96366.1| auxin response factor 9 [Arabidopsis thaliana]
          Length = 230

 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 300 YMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPL 359
           Y GT+ G+ D  P  W +S WR ++V WDE  +  R  +VS WE EP  +    P    L
Sbjct: 1   YSGTVIGVKDCSP-HWKDSKWRCLEVHWDEPASISRPNKVSPWETEPFVSSENIPKSVML 59

Query: 360 RLKRP 364
           + KRP
Sbjct: 60  KNKRP 64


>gi|242076896|ref|XP_002448384.1| hypothetical protein SORBIDRAFT_06g026370 [Sorghum bicolor]
 gi|241939567|gb|EES12712.1| hypothetical protein SORBIDRAFT_06g026370 [Sorghum bicolor]
          Length = 420

 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 1/87 (1%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F K +T SD        +P++ AEK FP LD +       L   D     W+FR+ +   
Sbjct: 100 FDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRAGKLWRFRYSYWNS 158

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLF 201
            + +++T GWS FV  KRL AGD+V F
Sbjct: 159 SQSYVMTKGWSRFVKEKRLDAGDTVSF 185


>gi|383932346|gb|AFH57270.1| RAV [Gossypium hirsutum]
          Length = 357

 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 44/98 (44%)

Query: 104 LGIPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDV 163
           LG   K     F K +T SD        +P++ AEK FP    S       L   D+   
Sbjct: 182 LGFELKAREQLFEKAVTPSDVGKLNRLVIPKQHAEKYFPLQSGSASSKGVLLNFEDVTGK 241

Query: 164 EWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLF 201
            W+FR+ +    + ++L  GWS FV  K L AGD V F
Sbjct: 242 VWRFRYSYWNSSQSYVLIKGWSRFVKEKNLKAGDIVSF 279


>gi|413917122|gb|AFW57054.1| hypothetical protein ZEAMMB73_040575 [Zea mays]
          Length = 296

 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 60/150 (40%), Gaps = 20/150 (13%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVE----WKFRHI 170
           F K LT SD        +PR+ AE  FP +  S      + I  +  D      W+FR  
Sbjct: 79  FSKVLTPSDVGKLNRLLIPRQCAEGFFPMI--SEVKSGGDDIFLNFEDTSTGLVWRFRFC 136

Query: 171 FRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWN-----EKNQLLLGIR---------RA 216
                K ++LT GWSVF+  K L  GD + F  +       N L + I+           
Sbjct: 137 LWNNSKTYVLTKGWSVFIKEKNLKKGDILSFYRDASKSIRTNHLFIHIKPHTGTMPLPHH 196

Query: 217 IRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 246
           +  P   PS ++  D +H  L    +H  A
Sbjct: 197 VPSPVFSPSGMVIDDQVHDSLNIGKSHGIA 226


>gi|195607458|gb|ACG25559.1| IAA12 - auxin-responsive Aux/IAA family member [Zea mays]
          Length = 224

 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 1/89 (1%)

Query: 681 FVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVL 739
           FVKV   G+   R LD+  +  Y ELRE L  MF   G   +   S + + + D++ D++
Sbjct: 132 FVKVSMDGAPYLRKLDLRMYKGYRELREALEAMFVSSGSANNNNLSEFAVTYQDKDGDLM 191

Query: 740 LLGDDPWEAFVSNVWYIKILSPEDVQKMG 768
           L+GD P+E F S    ++I+   +   +G
Sbjct: 192 LVGDVPFEMFASTCRKLRIMKRSEATGLG 220


>gi|115447949|ref|NP_001047754.1| Os02g0683500 [Oryza sativa Japonica Group]
 gi|75122233|sp|Q6EU30.1|Y2835_ORYSJ RecName: Full=B3 domain-containing protein Os02g0683500
 gi|50251902|dbj|BAD27840.1| RAV-like B3 domain DNA binding protein-like [Oryza sativa Japonica
           Group]
 gi|113537285|dbj|BAF09668.1| Os02g0683500 [Oryza sativa Japonica Group]
 gi|215766728|dbj|BAG98956.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 412

 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/120 (35%), Positives = 59/120 (49%), Gaps = 8/120 (6%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F K +T SD        +P++ AEK FP LD +       L   D     W+FR+ +   
Sbjct: 96  FDKVVTPSDVGKLNRLVIPKQYAEKYFP-LDAAANEKGLLLNFEDRAGKPWRFRYSYWNS 154

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLF---IWNEKNQLLLGI---RRA-IRPPTVMPSSV 227
            + +++T GWS FV  KRL AGD+V F   I +E  +  L I   RRA  R P  +P  +
Sbjct: 155 SQSYVMTKGWSRFVKEKRLDAGDTVSFSRGIGDEAARHRLFIDWKRRADTRDPLRLPRGL 214


>gi|297833940|ref|XP_002884852.1| hypothetical protein ARALYDRAFT_897360 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297330692|gb|EFH61111.1| hypothetical protein ARALYDRAFT_897360 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 263

 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 8/109 (7%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFP------SLDFSLQPPAQELIARDLHDVEWKFR 168
           F K+LT SD        +P++ AEK FP        D +       L   D     WKFR
Sbjct: 29  FEKSLTPSDVGKLNRLVIPKQHAEKYFPLNNNGGDDDVATTEKGMLLSFEDESGKCWKFR 88

Query: 169 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWN--EKNQLLLGIRR 215
           + +    + ++LT GWS +V  K L AGD V F  +  + ++L +G RR
Sbjct: 89  YSYWNSSQSYVLTKGWSRYVKDKHLDAGDVVFFQRHRFDLHRLFIGWRR 137


>gi|125540696|gb|EAY87091.1| hypothetical protein OsI_08488 [Oryza sativa Indica Group]
          Length = 411

 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 1/87 (1%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F K +T SD        +P++ AEK FP LD +       L   D     W+FR+ +   
Sbjct: 95  FDKVVTPSDVGKLNRLVIPKQYAEKYFP-LDAAANEKGLLLNFEDRAGKPWRFRYSYWNS 153

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLF 201
            + +++T GWS FV  KRL AGD+V F
Sbjct: 154 SQSYVMTKGWSRFVKEKRLDAGDTVSF 180


>gi|414867524|tpg|DAA46081.1| TPA: hypothetical protein ZEAMMB73_334184 [Zea mays]
          Length = 273

 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 11/108 (10%)

Query: 105 GIPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQE---------- 154
           G+   +  + F K +T SD        +P++ AE+ FP+LD S    +            
Sbjct: 20  GVAWLEKEHMFEKVVTPSDVGKLNRLVIPKQHAERYFPALDASAAAASASASAGGGKAGL 79

Query: 155 -LIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLF 201
            L   D     W+FR+ +    + +++T GWS FV  KRL AGD+VLF
Sbjct: 80  VLSFEDRAGKAWRFRYSYWNSSQSYVMTKGWSRFVKEKRLGAGDTVLF 127


>gi|116311012|emb|CAH67945.1| H0303A11-B0406H05.5 [Oryza sativa Indica Group]
          Length = 287

 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 1/88 (1%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F K +T SD        +P++ AEK FP LD +       L   D     W+FR+ +   
Sbjct: 87  FDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSAANEKGLLLSFEDRTGKLWRFRYSYWNS 145

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLFI 202
            + +++T GWS FV  KRL AGD+V F 
Sbjct: 146 SQSYVMTKGWSRFVKEKRLDAGDTVSFC 173


>gi|356533499|ref|XP_003535301.1| PREDICTED: auxin-responsive protein IAA30-like [Glycine max]
          Length = 177

 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 48/92 (52%), Gaps = 8/92 (8%)

Query: 678 TRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMF------GIEGKFEDPLRSGWQLV 730
           T  FVKVY  G  +GR L++     Y+EL + L QMF      G E     P R    L 
Sbjct: 84  TSFFVKVYMEGIPIGRKLNLLAHDGYHELVKTLEQMFDTTILWGTEMDGVQPERCH-VLT 142

Query: 731 FVDRENDVLLLGDDPWEAFVSNVWYIKILSPE 762
           + D E D++++GD PWE F+S V  +KI   E
Sbjct: 143 YEDGEGDLIMVGDVPWEMFLSAVKRLKITRVE 174


>gi|32492293|emb|CAE04153.1| OSJNBa0088A01.1 [Oryza sativa Japonica Group]
          Length = 293

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 1/88 (1%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F K +T SD        +P++ AEK FP LD +       L   D     W+FR+ +   
Sbjct: 87  FDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSAANEKGLLLSFEDRTGKLWRFRYSYWNS 145

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLFI 202
            + +++T GWS FV  KRL AGD+V F 
Sbjct: 146 SQSYVMTKGWSRFVKEKRLDAGDTVSFC 173


>gi|358347636|ref|XP_003637862.1| Maturase K [Medicago truncatula]
 gi|355503797|gb|AES85000.1| Maturase K [Medicago truncatula]
          Length = 624

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 1/87 (1%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F K +T SD        +P++ AEK FP LD +       L   D +   W+FR+ +   
Sbjct: 172 FDKAVTPSDVGKLNRLVIPKQHAEKYFP-LDSTSNEKGLLLNFEDRNGKLWRFRYSYWNS 230

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLF 201
            + +++T GWS FV  K+L AGD V F
Sbjct: 231 SQSYVMTKGWSRFVKEKKLDAGDIVSF 257


>gi|255566851|ref|XP_002524409.1| DNA-binding protein RAV1, putative [Ricinus communis]
 gi|223536370|gb|EEF38020.1| DNA-binding protein RAV1, putative [Ricinus communis]
          Length = 371

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 43/88 (48%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F K +T SD        +P++ AEK FP    S       L   D+    W+FR+ +   
Sbjct: 204 FEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGSNSTKGVLLNFEDITGKVWRFRYSYWNS 263

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLFI 202
            + ++LT GWS FV  K L AGD V F+
Sbjct: 264 SQSYVLTKGWSRFVKEKNLKAGDIVRFL 291


>gi|297827087|ref|XP_002881426.1| hypothetical protein ARALYDRAFT_902720 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297327265|gb|EFH57685.1| hypothetical protein ARALYDRAFT_902720 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 236

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 4/105 (3%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIA--RDLHDVEWKFRHIFR 172
           F K LT SD        +P++ AE+ FP    +     + L+    D     W+FR+ + 
Sbjct: 38  FEKPLTPSDVGKLNRLVIPKQHAERYFPLAAAAADAVEKGLLLCFEDEEGKPWRFRYSYW 97

Query: 173 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKN--QLLLGIRR 215
              + ++LT GWS +V  K L AGD VLF  +  N  +  +G RR
Sbjct: 98  NSSQSYVLTKGWSRYVKEKHLDAGDVVLFHRHRANGGRFFIGWRR 142


>gi|240255717|ref|NP_192059.4| AP2/B3-like transcriptional factor family protein [Arabidopsis
           thaliana]
 gi|334302839|sp|O82595.2|NGA4_ARATH RecName: Full=B3 domain-containing transcription factor NGA4;
           AltName: Full=Protein NGATHA 4
 gi|332656633|gb|AEE82033.1| AP2/B3-like transcriptional factor family protein [Arabidopsis
           thaliana]
          Length = 333

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 49/112 (43%), Gaps = 19/112 (16%)

Query: 103 ELGIPSKQPTNYFC----------KTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPA 152
           E+   S   TNYF           K LT SD        +P++ AE  FP  D       
Sbjct: 14  EIRASSSDHTNYFYSSERREHMFDKVLTPSDVGKLNRLVIPKQHAENFFPLED------N 67

Query: 153 QELIARDLHDVE---WKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLF 201
           Q     D  D     W+FR+ +    + +++T GWS FV  K+L AGD+V F
Sbjct: 68  QNGTVLDFQDKNGKMWRFRYSYWNSSQSYVMTKGWSRFVKEKKLFAGDTVSF 119


>gi|299882830|gb|ADJ57333.1| RAV-like 1 protein [Oryza sativa Japonica Group]
          Length = 400

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 1/87 (1%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F K +T SD        +P++ AEK FP LD +       L   D     W+FR+ +   
Sbjct: 87  FDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSAANEKGLLLSFEDRTGKLWRFRYSYWNS 145

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLF 201
            + +++T GWS FV  KRL AGD+V F
Sbjct: 146 SQSYVMTKGWSRFVKEKRLDAGDTVSF 172


>gi|125549456|gb|EAY95278.1| hypothetical protein OsI_17101 [Oryza sativa Indica Group]
          Length = 400

 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 1/87 (1%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F K +T SD        +P++ AEK FP LD +       L   D     W+FR+ +   
Sbjct: 87  FDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSAANEKGLLLSFEDRTGKLWRFRYSYWNS 145

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLF 201
            + +++T GWS FV  KRL AGD+V F
Sbjct: 146 SQSYVMTKGWSRFVKEKRLDAGDTVSF 172


>gi|297814780|ref|XP_002875273.1| hypothetical protein ARALYDRAFT_484335 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297321111|gb|EFH51532.1| hypothetical protein ARALYDRAFT_484335 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 333

 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 46/90 (51%), Gaps = 4/90 (4%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVE---WKFRHIF 171
           F KT+T SD        +P+  AEK FP L       + + I  +  DV    W+FR+ +
Sbjct: 180 FEKTVTPSDVGKLNRLVIPKHQAEKHFP-LPLGNNNVSVKGILLNFEDVNGKVWRFRYSY 238

Query: 172 RGQPKRHLLTTGWSVFVSAKRLVAGDSVLF 201
               + ++LT GWS FV  KRL AGD + F
Sbjct: 239 WNSSQSYVLTKGWSRFVKEKRLCAGDLISF 268


>gi|297723391|ref|NP_001174059.1| Os04g0581400 [Oryza sativa Japonica Group]
 gi|239983845|sp|Q7F9W2.2|Y4814_ORYSJ RecName: Full=B3 domain-containing protein Os04g0581400
 gi|255675715|dbj|BAH92787.1| Os04g0581400 [Oryza sativa Japonica Group]
          Length = 316

 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 1/88 (1%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F K +T SD        +P++ AEK FP LD +       L   D     W+FR+ +   
Sbjct: 110 FDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSAANEKGLLLSFEDRTGKLWRFRYSYWNS 168

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLFI 202
            + +++T GWS FV  KRL AGD+V F 
Sbjct: 169 SQSYVMTKGWSRFVKEKRLDAGDTVSFC 196


>gi|297814185|ref|XP_002874976.1| hypothetical protein ARALYDRAFT_912083 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297320813|gb|EFH51235.1| hypothetical protein ARALYDRAFT_912083 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 332

 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 50/109 (45%), Gaps = 13/109 (11%)

Query: 103 ELGIPSKQPTNYFC----------KTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPA 152
           ++G  S   TNYF           K LT SD        +P++ AE  FP          
Sbjct: 12  DIGASSSDNTNYFYSSERREHMFDKVLTPSDVGKLNRLVIPKQHAENYFP---LEGNQNG 68

Query: 153 QELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLF 201
             L  +D +   W+FR+ +    + +++T GWS FV  K+L AGD+V F
Sbjct: 69  TVLDFQDRNGKMWRFRYSYWNSSQSYVMTKGWSRFVKEKKLFAGDTVSF 117


>gi|356501831|ref|XP_003519727.1| PREDICTED: auxin-responsive protein IAA30-like [Glycine max]
          Length = 180

 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 48/92 (52%), Gaps = 8/92 (8%)

Query: 678 TRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMF------GIEGKFEDPLRSGWQLV 730
           T  FVKVY  G  +GR L++     Y+EL + L QMF      G E     P R    L 
Sbjct: 87  TSFFVKVYMEGIPIGRKLNLLAHDGYHELVKTLEQMFDTTILWGTEMDGVQPDRCH-VLT 145

Query: 731 FVDRENDVLLLGDDPWEAFVSNVWYIKILSPE 762
           + D E D++++GD PWE F+S V  +KI   E
Sbjct: 146 YEDGEGDLIMVGDVPWEMFLSAVKRLKITRVE 177


>gi|3695373|gb|AAC62776.1| F11O4.9 [Arabidopsis thaliana]
 gi|7268193|emb|CAB77720.1| putative DNA-binding protein [Arabidopsis thaliana]
 gi|119360095|gb|ABL66776.1| At4g01500 [Arabidopsis thaliana]
 gi|225898755|dbj|BAH30508.1| hypothetical protein [Arabidopsis thaliana]
 gi|227060729|gb|ACP18974.1| NGATHA4 [Arabidopsis thaliana]
          Length = 328

 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 9/97 (9%)

Query: 108 SKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVE--- 164
           S++  + F K LT SD        +P++ AE  FP  D       Q     D  D     
Sbjct: 24  SERREHMFDKVLTPSDVGKLNRLVIPKQHAENFFPLED------NQNGTVLDFQDKNGKM 77

Query: 165 WKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLF 201
           W+FR+ +    + +++T GWS FV  K+L AGD+V F
Sbjct: 78  WRFRYSYWNSSQSYVMTKGWSRFVKEKKLFAGDTVSF 114


>gi|449526628|ref|XP_004170315.1| PREDICTED: AP2/ERF and B3 domain-containing transcription factor
           RAV1-like, partial [Cucumis sativus]
          Length = 311

 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 44/88 (50%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F KT+T SD        +P++ AEK FP  +  +      L   D+    W+FR+ +   
Sbjct: 162 FEKTVTPSDVGKLNRLVIPKQHAEKNFPMEEGVVSGKGMLLNFEDMGGKVWRFRYSYWNS 221

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLFI 202
            + ++LT GWS FV    L AGD V F+
Sbjct: 222 SQSYVLTKGWSRFVKDNTLRAGDVVRFL 249


>gi|115484261|ref|NP_001065792.1| Os11g0156000 [Oryza sativa Japonica Group]
 gi|75270015|sp|Q53QI0.1|Y1160_ORYSJ RecName: Full=B3 domain-containing protein Os11g0156000
 gi|62701645|gb|AAX92718.1| Similar to probable RAV2-like DNA binding protein [imported] -
           Arabidopsis thaliana [Oryza sativa Japonica Group]
 gi|108864011|gb|ABA91538.2| B3 DNA binding domain containing protein, expressed [Oryza sativa
           Japonica Group]
 gi|113644496|dbj|BAF27637.1| Os11g0156000 [Oryza sativa Japonica Group]
 gi|215697789|dbj|BAG91982.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 279

 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 49/106 (46%), Gaps = 5/106 (4%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F K LT SD        +P++ AE+ FP            L   D     W+FR+ +   
Sbjct: 38  FEKPLTPSDVGKLNRLVIPKQHAERYFPLGAGDAADKGLILSFEDEAGAPWRFRYSYWTS 97

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLF-----IWNEKNQLLLGIRR 215
            + ++LT GWS +V  KRL AGD V F      +   ++L +G RR
Sbjct: 98  SQSYVLTKGWSRYVKEKRLDAGDVVHFERVRGSFGVGDRLFIGCRR 143


>gi|356570873|ref|XP_003553608.1| PREDICTED: B3 domain-containing protein At5g06250-like [Glycine
           max]
          Length = 299

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 46/91 (50%), Gaps = 5/91 (5%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQE----LIARDLHDVEWKFRHI 170
           F K LT SD        +P++ AEK FP LD S    A      L   D     W+FR+ 
Sbjct: 77  FEKPLTPSDVGKLNRLVIPKQHAEKYFP-LDSSGGDSAAAKGLLLSFEDESGKCWRFRYS 135

Query: 171 FRGQPKRHLLTTGWSVFVSAKRLVAGDSVLF 201
           +    + ++LT GWS +V  KRL AGD VLF
Sbjct: 136 YWNSSQSYVLTKGWSRYVKDKRLHAGDVVLF 166


>gi|449466693|ref|XP_004151060.1| PREDICTED: AP2/ERF and B3 domain-containing transcription factor
           RAV1-like [Cucumis sativus]
          Length = 317

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 44/88 (50%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F KT+T SD        +P++ AEK FP  +  +      L   D+    W+FR+ +   
Sbjct: 168 FEKTVTPSDVGKLNRLVIPKQHAEKNFPMEEGVVSGKGMLLNFEDMGGKVWRFRYSYWNS 227

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLFI 202
            + ++LT GWS FV    L AGD V F+
Sbjct: 228 SQSYVLTKGWSRFVKDNTLRAGDVVRFL 255


>gi|356515675|ref|XP_003526524.1| PREDICTED: LOW QUALITY PROTEIN: auxin-responsive protein IAA8-like
           [Glycine max]
          Length = 362

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 54/113 (47%), Gaps = 20/113 (17%)

Query: 681 FVKVYKSGS-VGRSLDISRFSSYNELREELGQMF-----------GI-------EGKFED 721
           FVKV   G+   R +D+  +S+Y EL   L +MF           GI       E K +D
Sbjct: 244 FVKVSMDGAPYLRKVDLENYSTYPELSSALXKMFSCFTMSKCGSHGILGREMLNETKLKD 303

Query: 722 PLR-SGWQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDVQKMGEQGVE 773
            L  S + L + DRE D +L+GD PWE F+     ++I+   D   +  + VE
Sbjct: 304 LLHGSEYVLTYEDREGDWMLVGDVPWEMFIETCKRLRIMKSSDAIGLAPRAVE 356


>gi|224111734|ref|XP_002315958.1| AP2 domain-containing transcription factor [Populus trichocarpa]
 gi|222864998|gb|EEF02129.1| AP2 domain-containing transcription factor [Populus trichocarpa]
          Length = 367

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 45/90 (50%), Gaps = 5/90 (5%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVE---WKFRHIF 171
           F K +T SD        +P++ AEK FP    S       L+  +L DV    W+FR+ +
Sbjct: 206 FEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSTSSNSTKGVLL--NLEDVSGKVWRFRYSY 263

Query: 172 RGQPKRHLLTTGWSVFVSAKRLVAGDSVLF 201
               + ++LT GWS FV  K L AGD V F
Sbjct: 264 WNSSQSYVLTKGWSRFVKEKNLKAGDIVCF 293


>gi|242081039|ref|XP_002445288.1| hypothetical protein SORBIDRAFT_07g007820 [Sorghum bicolor]
 gi|241941638|gb|EES14783.1| hypothetical protein SORBIDRAFT_07g007820 [Sorghum bicolor]
          Length = 270

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/150 (24%), Positives = 59/150 (39%), Gaps = 20/150 (13%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVE----WKFRHI 170
           F K LT +D        +PR+ AE  FP +         + +  +  D      W+FR  
Sbjct: 64  FGKILTTTDVGKMNRVLIPRQCAEGCFPKISEGNSGGDDDFL--NFEDCSTGLIWRFRFC 121

Query: 171 FRGQPKRHLLTTGWSVFVSAKRLVAGDSV--------------LFIWNEKNQLLLGIRRA 216
              + K++ LT GW V++  K L  GD +              +FI  + N   + +   
Sbjct: 122 LCNKSKKYFLTKGWHVYIKDKNLKKGDVLSFYRDASKTTSPNHMFIHIKPNTRTMSLPDH 181

Query: 217 IRPPTVMPSSVLSSDSMHIGLLAAAAHAAA 246
           +  P   PSS++ +D  H  L    +H   
Sbjct: 182 VSSPIFSPSSLMINDQFHQSLGFGTSHGIV 211


>gi|62701644|gb|AAX92717.1| Similar to probable RAV2-like DNA binding protein [imported] -
           Arabidopsis thaliana [Oryza sativa Japonica Group]
 gi|62701878|gb|AAX92951.1| Similar to probable RAV2-like DNA binding protein [imported] -
           Arabidopsis thaliana [Oryza sativa Japonica Group]
          Length = 313

 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 49/106 (46%), Gaps = 5/106 (4%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F K LT SD        +P++ AE+ FP            L   D     W+FR+ +   
Sbjct: 38  FEKPLTPSDVGKLNRLVIPKQHAERYFPLGAGDAADKGLILSFEDEAGAPWRFRYSYWTS 97

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLF-----IWNEKNQLLLGIRR 215
            + ++LT GWS +V  KRL AGD V F      +   ++L +G RR
Sbjct: 98  SQSYVLTKGWSRYVKEKRLDAGDVVHFERVRGSFGVGDRLFIGCRR 143


>gi|15222622|ref|NP_173927.1| AP2/ERF and B3 domain-containing transcription factor TEM1
           [Arabidopsis thaliana]
 gi|75268206|sp|Q9C6M5.1|RAVL1_ARATH RecName: Full=AP2/ERF and B3 domain-containing transcription
           repressor TEM1; AltName: Full=Protein TEMPRANILLO 1;
           AltName: Full=RAV1-like ethylene-responsive
           transcription factor TEM1
 gi|12321505|gb|AAG50808.1|AC079281_10 DNA-binding protein RAV2, putative [Arabidopsis thaliana]
 gi|20259539|gb|AAM13889.1| putative DNA-binding protein RAV2 [Arabidopsis thaliana]
 gi|21689705|gb|AAM67474.1| putative DNA-binding protein RAV2 [Arabidopsis thaliana]
 gi|332192521|gb|AEE30642.1| AP2/ERF and B3 domain-containing transcription factor TEM1
           [Arabidopsis thaliana]
          Length = 361

 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 7/94 (7%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFP----SLDFSLQPPAQELIARDLHDVE---WKF 167
           F KT+T SD        +P++ AEK FP    +    + P   + +  +L D     W+F
Sbjct: 195 FEKTVTPSDVGKLNRLVIPKQHAEKHFPLPAMTTAMGMNPSPTKGVLINLEDRTGKVWRF 254

Query: 168 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLF 201
           R+ +    + ++LT GWS FV  K L AGD V F
Sbjct: 255 RYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVCF 288


>gi|218185277|gb|EEC67704.1| hypothetical protein OsI_35175 [Oryza sativa Indica Group]
          Length = 363

 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 49/106 (46%), Gaps = 5/106 (4%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKFRHIFRGQ 174
           F K LT SD        +P++ AE+ FP            L   D     W+FR+ +   
Sbjct: 38  FEKPLTPSDVGKLNRLVIPKQHAERYFPLGAGDAADKGLILSFEDEAGAPWRFRYSYWTS 97

Query: 175 PKRHLLTTGWSVFVSAKRLVAGDSVLF-----IWNEKNQLLLGIRR 215
            + ++LT GWS +V  KRL AGD V F      +   ++L +G RR
Sbjct: 98  SQSYVLTKGWSRYVKEKRLDAGDVVHFERVRGSFGVGDRLFIGCRR 143


>gi|147782990|emb|CAN68564.1| hypothetical protein VITISV_032171 [Vitis vinifera]
          Length = 364

 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 45/94 (47%), Gaps = 1/94 (1%)

Query: 108 SKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKF 167
           +K     F KT+T SD        +P++ AEK FP L          L   D+    W+F
Sbjct: 184 TKSREQLFEKTVTPSDVGKLNRLVIPKQHAEKHFP-LQTGTTSKGVLLNFEDMGGKVWRF 242

Query: 168 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLF 201
           R+ +    + ++LT GWS FV  K L AGD V F
Sbjct: 243 RYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSF 276


>gi|225423895|ref|XP_002281709.1| PREDICTED: AP2/ERF and B3 domain-containing transcription repressor
           TEM1-like [Vitis vinifera]
          Length = 358

 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 45/94 (47%), Gaps = 1/94 (1%)

Query: 108 SKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWKF 167
           +K     F KT+T SD        +P++ AEK FP L          L   D+    W+F
Sbjct: 184 TKSREQLFEKTVTPSDVGKLNRLVIPKQHAEKHFP-LQTGTTSKGVLLNFEDMGGKVWRF 242

Query: 168 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLF 201
           R+ +    + ++LT GWS FV  K L AGD V F
Sbjct: 243 RYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSF 276


>gi|326533586|dbj|BAK05324.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 131

 Score = 53.5 bits (127), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 8/89 (8%)

Query: 674 QLTPTRTFVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFV 732
           +L P   +VKV K G+   R LD++ +  Y EL   LG++FG  G F       +QL   
Sbjct: 44  RLRPPSKYVKVMKRGAPYLRKLDLTEYRGYEELSAALGELFGPAGDFS----VTYQL--- 96

Query: 733 DRENDVLLLGDDPWEAFVSNVWYIKILSP 761
           D + D +L GD PW  FVS    + + SP
Sbjct: 97  DEDGDFMLAGDLPWGDFVSKCKKLTVSSP 125


>gi|297845604|ref|XP_002890683.1| hypothetical protein ARALYDRAFT_890147 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297336525|gb|EFH66942.1| hypothetical protein ARALYDRAFT_890147 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 357

 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 7/94 (7%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFP----SLDFSLQPPAQELIARDLHDVE---WKF 167
           F KT+T SD        +P++ AEK FP    +    + P   + +  +L D     W+F
Sbjct: 192 FEKTVTPSDVGKLNRLVIPKQHAEKHFPLPATTTAMGMSPSPTKGVLINLEDRTGKVWRF 251

Query: 168 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLF 201
           R+ +    + ++LT GWS FV  K L AGD V F
Sbjct: 252 RYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVCF 285


>gi|115445155|ref|NP_001046357.1| Os02g0228900 [Oryza sativa Japonica Group]
 gi|75258740|sp|Q6H543.1|IAA7_ORYSJ RecName: Full=Auxin-responsive protein IAA7; AltName:
           Full=Indoleacetic acid-induced protein 7
 gi|49388686|dbj|BAD25870.1| putative aux/IAA protein [Oryza sativa Japonica Group]
 gi|49388936|dbj|BAD26156.1| putative aux/IAA protein [Oryza sativa Japonica Group]
 gi|113535888|dbj|BAF08271.1| Os02g0228900 [Oryza sativa Japonica Group]
 gi|215768470|dbj|BAH00699.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222622470|gb|EEE56602.1| hypothetical protein OsJ_05967 [Oryza sativa Japonica Group]
          Length = 300

 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 22/106 (20%)

Query: 681 FVKVYKSGS-VGRSLDISRFSSYNELREELGQMF-GIEGKFEDPLRSG------------ 726
           F+K+   G  +GR +D++ F SY +L   + ++F G+     DPL +G            
Sbjct: 179 FIKINMDGVPIGRKIDLNAFDSYEKLSLAVDKLFRGLLAAQRDPLTAGAKDCQQEDVAIS 238

Query: 727 --------WQLVFVDRENDVLLLGDDPWEAFVSNVWYIKILSPEDV 764
                   + LV+ D E D +L+GD PW  FVS+V  +++L   D+
Sbjct: 239 GLLDGTGEYTLVYEDYEGDKVLVGDVPWGMFVSSVKRLRVLKTSDL 284


>gi|226499018|ref|NP_001149725.1| IAA7 - auxin-responsive Aux/IAA family member [Zea mays]
 gi|195629794|gb|ACG36538.1| IAA7 - auxin-responsive Aux/IAA family member [Zea mays]
          Length = 261

 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 22/103 (21%)

Query: 673 DQLTPTRTFVKVYKSG-SVGRSLDISRFSSYNELREELGQMF-GIEGKFEDPLRSG---- 726
           +Q T    FVK+   G  +GR +D+S   SY+EL   + ++F G+    +DPL +G    
Sbjct: 154 EQTTKRAPFVKINMDGIPIGRKIDLSALGSYDELSLSVDKLFRGLXAAQQDPLAAGAKEC 213

Query: 727 ----------------WQLVFVDRENDVLLLGDDPWEAFVSNV 753
                           + LV+ D E D +L+GD PW  FVS+V
Sbjct: 214 SQEEVAISGLLDGTGEYTLVYEDYEGDRVLVGDVPWGMFVSSV 256


>gi|21593532|gb|AAM65499.1| AP2 domain transcription factor [Arabidopsis thaliana]
          Length = 333

 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 2/89 (2%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPS--LDFSLQPPAQELIARDLHDVEWKFRHIFR 172
           F KT+T SD        +P+  AEK FP    + ++      L   D++   W+FR+ + 
Sbjct: 183 FEKTVTPSDVGKLNRLVIPKHQAEKHFPLPLGNNNVSVKGMLLNFEDVNGKVWRFRYSYW 242

Query: 173 GQPKRHLLTTGWSVFVSAKRLVAGDSVLF 201
              + ++LT GWS FV  KRL AGD + F
Sbjct: 243 NSSQSYVLTKGWSRFVKEKRLCAGDLISF 271


>gi|18420964|ref|NP_568478.1| auxin-responsive protein IAA28 [Arabidopsis thaliana]
 gi|11131406|sp|Q9XFM0.1|IAA28_ARATH RecName: Full=Auxin-responsive protein IAA28; AltName:
           Full=Indoleacetic acid-induced protein 28
 gi|4929493|gb|AAD34019.1|AF149816_1 IAA28 [Arabidopsis thaliana]
 gi|23306354|gb|AAN17404.1| putative protein [Arabidopsis thaliana]
 gi|25084149|gb|AAN72186.1| putative protein [Arabidopsis thaliana]
 gi|49616373|gb|AAT67083.1| IAA28 [Arabidopsis thaliana]
 gi|110736579|dbj|BAF00255.1| IAA28 [Arabidopsis thaliana]
 gi|284794587|gb|ADB93666.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
 gi|284794589|gb|ADB93667.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
 gi|284794591|gb|ADB93668.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
 gi|304322548|gb|ADL70761.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
 gi|304322560|gb|ADL70767.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
 gi|304322566|gb|ADL70770.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
 gi|304322570|gb|ADL70772.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
 gi|332006115|gb|AED93498.1| auxin-responsive protein IAA28 [Arabidopsis thaliana]
          Length = 175

 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 48/80 (60%), Gaps = 3/80 (3%)

Query: 681 FVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVL 739
           +VK+   G  +GR +++S +++Y +L   + Q+F  +  ++  L   + LV+ D E D +
Sbjct: 82  YVKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSKKDSWD--LNRQYTLVYEDTEGDKV 139

Query: 740 LLGDDPWEAFVSNVWYIKIL 759
           L+GD PWE FVS V  + +L
Sbjct: 140 LVGDVPWEMFVSTVKRLHVL 159


>gi|15230871|ref|NP_189201.1| AP2/ERF and B3 domain-containing transcription factor ARF14
           [Arabidopsis thaliana]
 gi|75273878|sp|Q9LS06.1|RAVL4_ARATH RecName: Full=AP2/ERF and B3 domain-containing transcription factor
           ARF14; AltName: Full=Protein AUXIN RESPONSE FACTOR 14;
           AltName: Full=RAV1-like ethylene-responsive
           transcription factor ARF14
 gi|7939559|dbj|BAA95760.1| RAV1 DNA-binding protein-like [Arabidopsis thaliana]
 gi|20152524|emb|CAD29641.1| putative auxin response factor 14 [Arabidopsis thaliana]
 gi|110738703|dbj|BAF01276.1| AP2 domain transcription factor [Arabidopsis thaliana]
 gi|332643541|gb|AEE77062.1| AP2/ERF and B3 domain-containing transcription factor ARF14
           [Arabidopsis thaliana]
          Length = 333

 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 2/89 (2%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPS--LDFSLQPPAQELIARDLHDVEWKFRHIFR 172
           F KT+T SD        +P+  AEK FP    + ++      L   D++   W+FR+ + 
Sbjct: 183 FEKTVTPSDVGKLNRLVIPKHQAEKHFPLPLGNNNVSVKGMLLNFEDVNGKVWRFRYSYW 242

Query: 173 GQPKRHLLTTGWSVFVSAKRLVAGDSVLF 201
              + ++LT GWS FV  KRL AGD + F
Sbjct: 243 NSSQSYVLTKGWSRFVKEKRLCAGDLISF 271


>gi|304322550|gb|ADL70762.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
 gi|304322562|gb|ADL70768.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
 gi|304322568|gb|ADL70771.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
 gi|304322572|gb|ADL70773.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
          Length = 174

 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 48/80 (60%), Gaps = 3/80 (3%)

Query: 681 FVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVL 739
           +VK+   G  +GR +++S +++Y +L   + Q+F  +  ++  L   + LV+ D E D +
Sbjct: 81  YVKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSKKDSWD--LNRQYTLVYEDTEGDKV 138

Query: 740 LLGDDPWEAFVSNVWYIKIL 759
           L+GD PWE FVS V  + +L
Sbjct: 139 LVGDVPWEMFVSTVKRLHVL 158


>gi|21618252|gb|AAM67302.1| RAV-like protein [Arabidopsis thaliana]
          Length = 283

 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 6/111 (5%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVE---WKFRHIF 171
           F K +T SD        +P++ AE+ FP LD S    + + +  +  D     W+FR+ +
Sbjct: 7   FDKVVTPSDVGKLNRLVIPKQHAERYFP-LDNSTTNDSNKGLLLNFEDRSGNSWRFRYSY 65

Query: 172 RGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWN--EKNQLLLGIRRAIRPP 220
               + +++T GWS FV  K+L AGD V F  +   K++L +  RR  + P
Sbjct: 66  WNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRDSCNKDKLYIDWRRRPKIP 116


>gi|304322556|gb|ADL70765.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
          Length = 164

 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 48/80 (60%), Gaps = 3/80 (3%)

Query: 681 FVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVL 739
           +VK+   G  +GR +++S +++Y +L   + Q+F  +  ++  L   + LV+ D E D +
Sbjct: 78  YVKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSKKDSWD--LNRQYTLVYEDTEGDKV 135

Query: 740 LLGDDPWEAFVSNVWYIKIL 759
           L+GD PWE FVS V  + +L
Sbjct: 136 LVGDVPWEMFVSTVKRLHVL 155


>gi|298111013|gb|ADB96329.2| auxin response factor 1 [Arabidopsis thaliana]
          Length = 223

 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/70 (42%), Positives = 39/70 (55%), Gaps = 2/70 (2%)

Query: 300 YMGTITGISDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPL--TTFPMYPSLF 357
           + GTI G+ +     W +S WRS+KV WDE ++  R  RVS WE+EPL   + P      
Sbjct: 1   FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 60

Query: 358 PLRLKRPWHP 367
           P R KRP  P
Sbjct: 61  PQRNKRPRPP 70


>gi|284794585|gb|ADB93665.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
 gi|284794593|gb|ADB93669.1| indole-3-acetic acid inducible 28 [Arabidopsis thaliana]
          Length = 168

 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 48/80 (60%), Gaps = 3/80 (3%)

Query: 681 FVKVYKSGS-VGRSLDISRFSSYNELREELGQMFGIEGKFEDPLRSGWQLVFVDRENDVL 739
           +VK+   G  +GR +++S +++Y +L   + Q+F  +  ++  L   + LV+ D E D +
Sbjct: 82  YVKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSKKDSWD--LNRQYTLVYEDTEGDKV 139

Query: 740 LLGDDPWEAFVSNVWYIKIL 759
           L+GD PWE FVS V  + +L
Sbjct: 140 LVGDVPWEMFVSTVKRLHVL 159


>gi|356495986|ref|XP_003516851.1| PREDICTED: AP2/ERF and B3 domain-containing transcription repressor
           TEM1-like [Glycine max]
          Length = 384

 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 7/94 (7%)

Query: 115 FCKTLTASDTSTHGGFSVPRRAAEKVFP----SLDFSLQPPAQELIARDLHDVE---WKF 167
           F K +T SD        +P++ AEK FP    +   S    A + +  +  DV    W+F
Sbjct: 205 FQKAVTPSDVGKLNRLVIPKQHAEKHFPLQSAANGVSATATAAKGVLLNFEDVGGKVWRF 264

Query: 168 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLF 201
           R+ +    + ++LT GWS FV  K L AGD+V F
Sbjct: 265 RYSYWNSSQSYVLTKGWSRFVKEKNLKAGDTVCF 298


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.317    0.132    0.396 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,049,668,251
Number of Sequences: 23463169
Number of extensions: 576390708
Number of successful extensions: 2139217
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3662
Number of HSP's successfully gapped in prelim test: 5193
Number of HSP's that attempted gapping in prelim test: 1821427
Number of HSP's gapped (non-prelim): 135170
length of query: 799
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 648
effective length of database: 8,816,256,848
effective search space: 5712934437504
effective search space used: 5712934437504
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 81 (35.8 bits)