Query 003735
Match_columns 799
No_of_seqs 381 out of 3154
Neff 8.2
Searched_HMMs 29240
Date Tue Mar 26 18:13:11 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/003735.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1783-1787//hhsearch_pdb/003735hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2zxe_A Na, K-ATPase alpha subu 1.0 1 1 929.0 65.0 660 117-799 49-768 (1028)
2 3ixz_A Potassium-transporting 1.0 1 1 920.8 68.2 656 117-799 54-773 (1034)
3 3ar4_A Sarcoplasmic/endoplasmi 1.0 1 1 900.0 65.9 668 117-798 6-748 (995)
4 1mhs_A Proton pump, plasma mem 1.0 1 1 875.8 44.0 599 119-799 70-679 (920)
5 3b8c_A ATPase 2, plasma membra 1.0 1 1 870.3 -10.1 608 119-799 17-633 (885)
6 3j09_A COPA, copper-exporting 1.0 1 1 703.6 26.0 606 42-798 13-648 (723)
7 3rfu_A Copper efflux ATPase; a 1.0 1 1 690.4 39.6 511 158-798 128-668 (736)
8 3j08_A COPA, copper-exporting 1.0 1 1 657.1 34.6 504 159-798 47-570 (645)
9 2yj3_A Copper-transporting ATP 1.0 1 1 238.4 0.0 242 426-798 4-250 (263)
10 3a1c_A Probable copper-exporti 1.0 1 1 194.3 20.5 262 426-798 8-276 (287)
No 1
>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A
Probab=1.00 E-value=1 Score=929.03 Aligned_cols=660 Identities=30% Similarity=0.424 Sum_probs=554.6
Q ss_pred HHCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-C
Q ss_conf 607987899982899359999119999999872499866889976099999999966799999999999887520026-8
Q 003735 117 VHGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATE-G 195 (799)
Q Consensus 117 ~~~gv~gl~~~l~~~~~~Gl~~~~~~~~~r~~~~g~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~-~ 195 (799)
+...+++++..|.+++..||+.++ +.+|++.||+|.++.++.+|+|+.++++|++++.++++++++++++++.+.. .
T Consensus 49 ~~~~~~~~~~~l~t~~~~GLs~~e--~~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~ 126 (1028)
T 2zxe_A 49 HKLSLDELHNKYGTDLTRGLTNAR--AKEILARDGPNSLTPPPTTPEWIKFCRQLFGGFSILLWIGAILCFLAYGIQAAT 126 (1028)
T ss_dssp SSSCHHHHHHHHTCCSSSCBCHHH--HHHHHHHHCCSCCCCCCCCCHHHHHHTTTTSTHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHCCHHHHHHHHCCCCCCCCCHHH--HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 549999999996869467989999--999998669997999999989999999997089999999999999998751134
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHCCCEEEEEECCEEEEEECCCCCCCCEEEECCCCEEC
Q ss_conf 99874315899999999999999999999999----99976351485569996994999763788866299956998530
Q 003735 196 WPKGAHDGLGIVMSILLVVFVTATSDYKQSLQ----FKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVP 271 (799)
Q Consensus 196 ~~~~~~d~~~i~~~illv~~~~~~~~~~~~~~----~~~l~~~~~~~~v~V~R~g~~~~I~~~~LvvGDii~i~~Gd~vP 271 (799)
....|.+.....++++++++++++..+.|+++ .++|.+ ..+..++|+|||++++|++++|||||||.|++||+||
T Consensus 127 ~~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~~~~~L~~-l~~~~a~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IP 205 (1028)
T 2zxe_A 127 EDEPANDNLYLGVVLSTVVIVTGCFSYYQEAKSSRIMDSFKN-MVPQQALVIRDGEKSTINAEFVVAGDLVEVKGGDRIP 205 (1028)
T ss_dssp SCCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCCCCHHHHHHT-TSCSEEEEEETTEEEEEEGGGCCTTCEEEEETTCBCC
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEE
T ss_conf 566652007999898988889999999999999999999885-2787269998999999988897867779989979841
Q ss_pred CCEEEEEECEEEEECCCCCCCCCCCCCCCCC---------CEEECCCEEEECEEEEEEEEECCCCHHHHHHHHHCCCCCC
Q ss_conf 3479995250699543465999740138999---------7787064344143999999980511267899751479999
Q 003735 272 ADGLFVSGFSVLINESSLTGESEPVNVNALN---------PFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDD 342 (799)
Q Consensus 272 aDg~il~g~~l~vDeS~lTGEs~pv~k~~~~---------~~v~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~ 342 (799)
|||++++|++|.||||+|||||.|+.|..++ +++|+||.|.+|.++++|++||.+|++|+|++++.+++.+
T Consensus 206 aD~~ll~g~~~~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~ 285 (1028)
T 2zxe_A 206 ADLRIISAHGCKVDNSSLTGESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIATLASGLEVG 285 (1028)
T ss_dssp SEEEEEEEEEEEEECHHHHSCCSCEECCSSCCCSSTTTCSSEECTTCEEEEEEEEEEEEECGGGSHHHHHHHHHHHSCCC
T ss_pred CEEEEEEECCEEEECCCCCCCCCCEECCCCCCCCCCCCCCCEEEECCEEECCEEEEEEEEECCCCHHHHHHHHCCCCCCC
T ss_conf 22899960858998675678876344346778888445335487374697016999999845143988999860378878
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
Q ss_conf 99169999999999999999999999999998876530258874456875638999999999999998807843699999
Q 003735 343 ETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTL 422 (799)
Q Consensus 343 ~tplq~~l~~~a~~i~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvva~P~~Lplav~l 422 (799)
++|+|+.+++++.++..+++.+++++|++++. . +. .+...+.++++++|++|||+||+++|+
T Consensus 286 ~t~lq~~~~~~~~~l~~~~l~~~~~~~~~~~~---~-----~~----------~~~~~~~~~i~llv~~iP~~Lp~~vti 347 (1028)
T 2zxe_A 286 RTPIAIEIEHFIHIITGVAVFLGVSFFILSLI---L-----GY----------SWLEAVIFLIGIIVANVPEGLLATVTV 347 (1028)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---T-----TC----------CHHHHHHHHHHHHHHHSCTTHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---C-----CC----------CHHHHHHHHHHHHHHHCCCHHHHHHHH
T ss_conf 89289999999999999999999999999997---3-----67----------699999999999999747417999999
Q ss_pred HHHHHHHHHHHHHHHHCCCCHHHCCCCCEEEEECCCCCCCCCCEEEEEEEECCEEEEECCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 99999999720224241510000148821685267774212743999999838355306999988889999936999999
Q 003735 423 SLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLL 502 (799)
Q Consensus 423 ~l~~~~~~l~~~~ilvr~~~alE~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 502 (799)
++++++++|.++|++||+++++|+||++++||||||||||+|+|+|.+++..+..+..+...................+.
T Consensus 348 ~l~~~~~~mak~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 427 (1028)
T 2zxe_A 348 CLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATWSALS 427 (1028)
T ss_dssp HHHHHHHHHHTTTEEESSTTHHHHHHHCCEEEECCCCCCBCSSCEEEEEEETTEEEECCCCTTCCSCCCCSSCHHHHHHH
T ss_pred HHHHHHHHHHHCCCEECCCHHHHHHCCCEEEECCCCCCCCCCEEEEEEEEECCEEEECCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 99999999855891644456766414762995168888887738999999898465136777765544466778999999
Q ss_pred HHHHHCCCCEEEECCCC----CEEECCCCHHHHHHHHHHHCCCCHHHHHHHCCEEEEECCCCCCCEEEEEEEEC---CCC
Q ss_conf 99985288507741798----23772790279999999990999388853052379934889995189999708---994
Q 003735 503 QSIFNNTGGEVVIGEGN----KTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELP---EGG 575 (799)
Q Consensus 503 ~~~~~n~~~~~~~~~~~----~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~i~~~~~F~s~~k~~~vi~~~~---~~~ 575 (799)
...++|+++.++.+..+ ..+..|+|+|.||++++...+.+....+..+++++.+||+|.+|||+++++.+ +++
T Consensus 428 ~~~alc~~~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~~~~~~ 507 (1028)
T 2zxe_A 428 RIAALCNRAVFQAGQDNVPILKRSVAGDASESALLKCIELCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHENEKSSESR 507 (1028)
T ss_dssp HHHHHSCCCEECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCHHHHHHHSCEEEEECCCTTTCEEEEEEECSCTTTCC
T ss_pred HHHHHCCCCEEECCCCCCCCCCCEECCCCHHHHHHHHHHHHCCCHHHHHHHCCEEEEECCCCCCCEEEEEEECCCCCCCC
T ss_conf 99986578765047777766453007894099999999995898889887482678704476666479999405788871
Q ss_pred EEEEECCCHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCC--------CCCCCCCC
Q ss_conf 7999838257999740100156990740899899999999999987003145688998399988--------89999888
Q 003735 576 FRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFS--------ADAPIPTE 647 (799)
Q Consensus 576 ~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~glr~i~~A~k~~~~~~~--------~~~~~~~~ 647 (799)
+.+++||+||.|++.|+++. .+|...+++++.++.+.+.++.|+++|+|++++|||+++.+.. +.....+.
T Consensus 508 ~~~~~KGA~e~il~~c~~~~-~~g~~~~l~~~~~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~~~~~~~~~~~~e~ 586 (1028)
T 2zxe_A 508 YLLVMKGAPERILDRCSTIL-LNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGYPFDADEPNFPTT 586 (1028)
T ss_dssp EEEEEEECHHHHHTTEEEEC-BTTBCCBCCHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSTTSCTTCCCCTTTTCSCCS
T ss_pred EEEEEECCCHHHHHHHHHHH-CCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHC
T ss_conf 79999388289998745653-38972128889999999999999855997999998746822134201246245555543
Q ss_pred CCEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCC------------------------
Q ss_conf 61464121136999200899999998589789998589988999999992986699------------------------
Q 003735 648 GYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN------------------------ 703 (799)
Q Consensus 648 ~~~llg~i~~~D~~R~~~~~~i~~l~~aGi~v~m~TGd~~~~a~~ia~~~gi~~~~------------------------ 703 (799)
|++|+|+++|+||+||+++++|+.|+++||+++|+|||+..+|.++|++|||...+
T Consensus 587 ~l~~lG~i~i~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 666 (1028)
T 2zxe_A 587 DLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAK 666 (1028)
T ss_dssp SEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCC
T ss_pred CEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHCCCCCCC
T ss_conf 80998651157899844899999999869979998899779999999986988788336777776418632221555662
Q ss_pred CEEECCHHHHCCCHHHHHHHCCCC--EEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCCEEEECCCCCCH
Q ss_conf 343314222036998995263981--599942822389999999874799799992994598764109920641899989
Q 003735 704 GIAIEGPEFREKSDEELSKLIPKI--QVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTE 781 (799)
Q Consensus 704 ~~~~~g~~~~~~~~~~~~~~~~~~--~v~a~~~p~~K~~~v~~l~~~~g~~V~~~GDg~ND~~aL~~Advgiamg~~g~~ 781 (799)
..+++|.++..+.++++.+.+.+. .+++|++|+||..+|+.+|+. |++|+|+|||.||+|||++||+|||||++|+|
T Consensus 667 ~~vi~G~~l~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~-g~~V~~iGDG~ND~paLk~AdvGIAmg~~gtd 745 (1028)
T 2zxe_A 667 ACVVHGSDLKDLSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQ-GAIVAVTGDGVNDSPALKKADIGVAMGISGSD 745 (1028)
T ss_dssp EEEEEHHHHTTCCHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHT-TCCEEEEECSGGGHHHHHHSSEEEEESSSCCH
T ss_pred EEEEECHHHHHCCHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHC-CCEEEEECCCCCHHHHHHHCCCEEEECCCCCH
T ss_conf 69988088564799999999862796799985888999999999968-99899985885339999868911996776588
Q ss_pred HHHHHCCC-----CHHHHHHHHC
Q ss_conf 89870178-----8376887549
Q 003735 782 VELECCCF-----NFSSRKTYIL 799 (799)
Q Consensus 782 ~ak~~adi-----nf~siv~~i~ 799 (799)
++|++||+ ||++|+++|.
T Consensus 746 ~ak~aAD~Vl~~~~~~~I~~~i~ 768 (1028)
T 2zxe_A 746 VSKQAADMILLDDNFASIVTGVE 768 (1028)
T ss_dssp HHHHHCSEEETTCCTHHHHHHHH
T ss_pred HHHHHCCEEECCCCHHHHHHHHH
T ss_conf 89985489955798779999999
No 2
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A
Probab=1.00 E-value=1 Score=920.78 Aligned_cols=656 Identities=30% Similarity=0.404 Sum_probs=553.7
Q ss_pred HHCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--
Q ss_conf 607987899982899359999119999999872499866889976099999999966799999999999887520026--
Q 003735 117 VHGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATE-- 194 (799)
Q Consensus 117 ~~~gv~gl~~~l~~~~~~Gl~~~~~~~~~r~~~~g~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~-- 194 (799)
+...+++++..|++++..||+.++ +.+|+..||+|.+++++.+++|+.++++|++++.++++++++++++.+....
T Consensus 54 ~~~~~~~~~~~l~~~~~~GLs~~e--a~~rl~~~G~N~l~~~~~~~~~~~~~~q~~~~~~~il~~aa~~~~~~~~~~~~~ 131 (1034)
T 3ixz_A 54 HQLSVAELEQKYQTSATKGLSASL--AAELLLRDGPNALRPPRGTPEYVKFARQLAGGLQCLMWVAAAICLIAFAIQASE 131 (1034)
T ss_pred HHCCHHHHHHHHCCCCCCCCCHHH--HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 449999999985979121979999--999998509998999899988999999984738999999999999999874034
Q ss_pred -CC--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHCCCEEEEEECCEEEEEECCCCCCCCEEEECCC
Q ss_conf -89--987431589999999999999999999999999----97635148556999699499976378886629995699
Q 003735 195 -GW--PKGAHDGLGIVMSILLVVFVTATSDYKQSLQFK----DLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMG 267 (799)
Q Consensus 195 -~~--~~~~~d~~~i~~~illv~~~~~~~~~~~~~~~~----~l~~~~~~~~v~V~R~g~~~~I~~~~LvvGDii~i~~G 267 (799)
.+ ...|++++.+ +++++++++..|+|+++.+ +|.+ ..+..++|+|||++++|++++|||||||.|++|
T Consensus 132 ~~~~~~~~~~~~~~i----~~vv~i~~~~~~~qe~ka~~al~~L~~-l~~~~a~ViRdG~~~~I~~~eLv~GDiV~l~~G 206 (1034)
T 3ixz_A 132 GDLTTDDNLYLALAL----IAVVVVTGCFGYYQEFKSTNIIASFKN-LVPQQATVIRDGDKFQINADQLVVGDLVEMKGG 206 (1034)
T ss_pred CCCCCCCCHHHHHHH----HEEEEHHHHHHHHHHHHHHHHHHHHHC-CCCCEEEEEECCEEEEEEHHHCCCCCEEEECCC
T ss_conf 777654420564243----013227999999999999999999762-489735999999899988898798858998579
Q ss_pred CEECCCEEEEEECEEEEECCCCCCCCCCCCCCCC---------CCEEECCCEEEECEEEEEEEEECCCCHHHHHHHHHCC
Q ss_conf 8530347999525069954346599974013899---------9778706434414399999998051126789975147
Q 003735 268 DQVPADGLFVSGFSVLINESSLTGESEPVNVNAL---------NPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSE 338 (799)
Q Consensus 268 d~vPaDg~il~g~~l~vDeS~lTGEs~pv~k~~~---------~~~v~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~ 338 (799)
|+|||||++++|+++.||||+|||||.|+.|..+ .+.+|+||.|.+|.++++|++||.+|++|+|++++..
T Consensus 207 d~VPAD~~ll~~~~l~VdES~LTGES~pv~K~~~~~~~~~~~~~n~~f~GT~v~~G~~~~vVv~tG~~T~~GkI~~~~~~ 286 (1034)
T 3ixz_A 207 DRVPADIRILQAQGRKVDNSSLTGESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGRIASLASG 286 (1034)
T ss_pred CEECCCEEEEEECCCEEEECCCCCCCCCEECCCCCCCCCCCCCCCCEECCEEEEEECCEEEEEEEHHHHHHHHHHHHHCC
T ss_conf 64358769997088058833667887776655777665632344512204069860424999960254374089986203
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHH
Q ss_conf 99999916999999999999999999999999999887653025887445687563899999999999999880784369
Q 003735 339 GGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPL 418 (799)
Q Consensus 339 ~~~~~tplq~~l~~~a~~i~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvva~P~~Lpl 418 (799)
.+..++|+|+++++++.++..+++.+++++|++++.. + ..+...|..++++++++||||||+
T Consensus 287 ~~~~~tpl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--------~----------~~~~~~~~~~i~l~v~~iPe~Lp~ 348 (1034)
T 3ixz_A 287 VENEKTPIAIEIEHFVDIIAGLAILFGATFFIVAMCI--------G----------YTFLRAMVFFMAIVVAYVPEGLLA 348 (1034)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------C----------CHHHHHHHHHHHHHHHEECCCCHH
T ss_conf 5667891899999999999999999999999999996--------4----------129999999999988202665089
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCEEEEECCCCCCCCCCEEEEEEEECCEEEEECCCCCCCCCCCCCCHHHH
Q ss_conf 99999999999972022424151000014882168526777421274399999983835530699998888999993699
Q 003735 419 AVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASAS 498 (799)
Q Consensus 419 av~l~l~~~~~~l~~~~ilvr~~~alE~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (799)
++|+++++++++|.++|++||+++++|+||++++||||||||||+|+|+|.++|+.+..+..+.................
T Consensus 349 ~vti~la~~~~rmak~~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (1034)
T 3ixz_A 349 TVTVCLSLTAKRLASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETW 428 (1034)
T ss_pred HHHHHHHHHHHHHHHCCEEECCHHHHHHHCCCCEEECCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHH
T ss_conf 99999999999873388286476788861587299728978723683799999977951225676665665567677899
Q ss_pred HHHHHHHHHCCCCEEEECCCC----CEEECCCCHHHHHHHHHHHCCCCHHHHHHHCCEEEEECCCCCCCEEEEEEEECC-
Q ss_conf 999999985288507741798----237727902799999999909993888530523799348899951899997089-
Q 003735 499 KLLLQSIFNNTGGEVVIGEGN----KTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPE- 573 (799)
Q Consensus 499 ~~l~~~~~~n~~~~~~~~~~~----~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~i~~~~~F~s~~k~~~vi~~~~~- 573 (799)
..+.....+|+++.+..+++. .....|+|+|.|++.++...+.+....+..+++++.+||+|.+|+|++++...+
T Consensus 429 ~~l~~~~~lc~~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~m~~v~~~~~~ 508 (1034)
T 3ixz_A 429 RALCRVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMGYRERFPKVCEIPFNSTNKFQLSIHTLEDP 508 (1034)
T ss_pred HHHHHHHHHHCCCEECCCCCCCCCCCCEECCCCHHHHHHHHHHHHCCCHHHHHHHCCCEEEEEECCCCCEEEEEEEECCC
T ss_conf 99999988716266535767776657435549259999999998578868889748606995035777268999983378
Q ss_pred --CCEEEEECCCHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCC--------CCCC
Q ss_conf --947999838257999740100156990740899899999999999987003145688998399988--------8999
Q 003735 574 --GGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFS--------ADAP 643 (799)
Q Consensus 574 --~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~glr~i~~A~k~~~~~~~--------~~~~ 643 (799)
+.+.+++|||||.|++.|+.+.. +|...+++++.++.+.+.++.|+.+|+|++++|||.++.... ...+
T Consensus 509 ~~~~~~l~~KGApe~il~~c~~~~~-~~~~~~l~~~~~~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~~~~~~~~~~ 587 (1034)
T 3ixz_A 509 RDPRHVLVMKGAPERVLERCSSILI-KGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFDVEAMN 587 (1034)
T ss_pred CCCCEEEEEECCHHHHHHHHHHHHC-CCCEECCCHHHHHHHHHHHHHHHHCCCHHHEEEEEECCHHHCCCCCCCCHHHHH
T ss_conf 8860899996884999997377552-896401999999999999999871475823686785580004321124534430
Q ss_pred CCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCC--------------------
Q ss_conf 988861464121136999200899999998589789998589988999999992986699--------------------
Q 003735 644 IPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-------------------- 703 (799)
Q Consensus 644 ~~~~~~~llg~i~~~D~~R~~~~~~i~~l~~aGi~v~m~TGd~~~~a~~ia~~~gi~~~~-------------------- 703 (799)
..+.|++|+|+++++||+||+++++|+.|+++||+|+|+|||+..+|.++|+++||..++
T Consensus 588 ~~e~~l~~lGlv~i~Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~ 667 (1034)
T 3ixz_A 588 FPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNR 667 (1034)
T ss_pred CCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHCCC
T ss_conf 22248679888713688706599999999986996999969977999999998699988724788888761765000254
Q ss_pred ----CEEECCHHHHCCCHHHHHHHCCCC--EEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCCEEEECCC
Q ss_conf ----343314222036998995263981--59994282238999999987479979999299459876410992064189
Q 003735 704 ----GIAIEGPEFREKSDEELSKLIPKI--QVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGI 777 (799)
Q Consensus 704 ----~~~~~g~~~~~~~~~~~~~~~~~~--~v~a~~~p~~K~~~v~~l~~~~g~~V~~~GDg~ND~~aL~~Advgiamg~ 777 (799)
..+++|.++..+.++++.+.+.+. .+++|++|++|..+|+.+|+. |++|+|+|||.||+|||++||+|||||+
T Consensus 668 ~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~-g~~V~a~GDG~ND~~mLk~A~vGIAMg~ 746 (1034)
T 3ixz_A 668 KDARACVINGMQLKDMDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRL-GAIVAVTGDGVNDSPALKKADIGVAMGI 746 (1034)
T ss_pred CCCCEEEEECHHHHHCCHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHC-CCEEEEECCCHHHHHHHHHCCEEEEECC
T ss_conf 454316771676663899999999873782699966989999999999976-9999998795776999997893298077
Q ss_pred CCCHHHHHHCCC-----CHHHHHHHHC
Q ss_conf 998989870178-----8376887549
Q 003735 778 AGTEVELECCCF-----NFSSRKTYIL 799 (799)
Q Consensus 778 ~g~~~ak~~adi-----nf~siv~~i~ 799 (799)
+|+|++|++||+ ||++|+.+|+
T Consensus 747 ng~d~aK~aAD~Vl~~~~~~gI~~ai~ 773 (1034)
T 3ixz_A 747 AGSDAAKNAADMILLDDNFASIVTGVE 773 (1034)
T ss_pred CCCHHHHHHCCEEECCCCCHHHHHHHH
T ss_conf 567999985499966688339999999
No 3
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...
Probab=1.00 E-value=1 Score=900.05 Aligned_cols=668 Identities=30% Similarity=0.426 Sum_probs=551.7
Q ss_pred HHCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 60798789998289935999911999999987249986688997609999999996679999999999988752002689
Q 003735 117 VHGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGW 196 (799)
Q Consensus 117 ~~~gv~gl~~~l~~~~~~Gl~~~~~~~~~r~~~~g~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~ 196 (799)
+...+++++..|+++...||+.++ +.+|++.||.|.++.++.+++|+.++++|++++++++++++++++++++...+.
T Consensus 6 ~~~~~~~~~~~l~~~~~~GLs~~e--~~~r~~~~G~N~l~~~~~~~~~~~~~~qf~~~~~~~l~~~a~~s~~~~~~~~~~ 83 (995)
T 3ar4_A 6 HSKSTEECLAYFGVSETTGLTPDQ--VKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEGE 83 (995)
T ss_dssp GGSCHHHHHHHHTCCTTTCBCHHH--HHHHHHHHCCSSCCCCCCCCHHHHHHGGGCSHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred HHCCHHHHHHHHCCCCCCCCCHHH--HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 548999999985899666989999--999997568873289889869999999998899999999999999988602566
Q ss_pred --CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCE--EEEEECCCCCCCCEEEECCCCEECC
Q ss_conf --987431589999999999999999999999999976351485569996994--9997637888662999569985303
Q 003735 197 --PKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGF--RRKISIYDLLPGDIVHLCMGDQVPA 272 (799)
Q Consensus 197 --~~~~~d~~~i~~~illv~~~~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~--~~~I~~~~LvvGDii~i~~Gd~vPa 272 (799)
...|++++.+++.+++...+..+.+++.++..++|.+ ..+..++|+|||+ .++|++++|+|||||.|++||+|||
T Consensus 84 ~~~~~~~~~~~i~~~~~~~~~i~~~qe~~a~~al~~L~~-~~~~~a~V~R~g~~~~~~I~~~~lv~GDiV~l~~Gd~IPa 162 (995)
T 3ar4_A 84 ETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKE-YEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPA 162 (995)
T ss_dssp GGGSSSHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHGG-GSCSEEEEEBTTCSSCEEEEGGGCCTTCEEEEETTCBCCS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCEEEEEECCCCEEEEEEHHHCCCCCEEEECCCCCCCC
T ss_conf 540347876886678899999999999999999999871-0897389993798647997899987787899889784354
Q ss_pred CEEEEEE--CEEEEECCCCCCCCCCCCCCCCC------------CEEECCCEEEECEEEEEEEEECCCCHHHHHHHHHCC
Q ss_conf 4799952--50699543465999740138999------------778706434414399999998051126789975147
Q 003735 273 DGLFVSG--FSVLINESSLTGESEPVNVNALN------------PFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSE 338 (799)
Q Consensus 273 Dg~il~g--~~l~vDeS~lTGEs~pv~k~~~~------------~~v~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~ 338 (799)
||+++++ .+|.||||+|||||.|+.|..+. +++|+||.|.+|.++++|++||.+|++|++++++.+
T Consensus 163 D~~ll~~~s~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~ 242 (995)
T 3ar4_A 163 DIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMAA 242 (995)
T ss_dssp EEEEEEECSSCEEEECHHHHCCCSCEEECCSCCCCTTCCGGGCTTEECTTCEEEECEEEEEEEECGGGSHHHHHHHHHHT
T ss_pred CEEEEEEEECEEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCCEEECCCEEECCEEEEEEEECCCCHHHHHHHHHHHC
T ss_conf 48999885043999825246887633400456677666755545467618789844589999976722198999997325
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHH
Q ss_conf 99999916999999999999999999999999999887653025887445687563899999999999999880784369
Q 003735 339 GGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPL 418 (799)
Q Consensus 339 ~~~~~tplq~~l~~~a~~i~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvva~P~~Lpl 418 (799)
++.+++|+|+++++++.++.++++.+++++|+++...+ . ....+. .| ...+..+|..++++++++|||+||+
T Consensus 243 ~~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~--~~----~~~~~~~~~~ai~l~v~aiP~~Lp~ 314 (995)
T 3ar4_A 243 TEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHF-N-DPVHGG--SW----IRGAIYYFKIAVALAVAAIPEGLPA 314 (995)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGG-G-SCSSSS--CH----HHHHHHHHHHHHHHHHHHSCTTHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-C-CCCCCC--HH----HHHHHHHHHHHHHHHHHHCCCCHHH
T ss_conf 78789938999999999999999999999999999874-1-433464--07----9999999999999999866760489
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCEEEEECCCCCCCCCCEEEEEEEECCEEE---------EECCCCCCCCC
Q ss_conf 999999999999720224241510000148821685267774212743999999838355---------30699998888
Q 003735 419 AVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIK---------EVDNSKGTPAF 489 (799)
Q Consensus 419 av~l~l~~~~~~l~~~~ilvr~~~alE~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~---------~~~~~~~~~~~ 489 (799)
++|+++++++++|.++|++||+++++|+||++++||||||||||+|+|+|.+++..+..+ ..+.....+..
T Consensus 315 ~vt~~la~~~~~ma~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 394 (995)
T 3ar4_A 315 VITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEG 394 (995)
T ss_dssp HHHHHHHHHHHHHHHTTEEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEEEEEEETTEEEEEEEEECCSSSSSCC
T ss_pred HHHHHHHHHHHHHCCCCCEECCCHHHHHHCCCEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEECCCCCCCCCC
T ss_conf 99999999999844178486134155550383399765888766585699999834755676554302540477768863
Q ss_pred C--------CCCCHHHHHHHHHHHHHCCCCEEEEC-CCCCEEECCCCHHHHHHHHHHHCCC-C--HH-------------
Q ss_conf 9--------99993699999999985288507741-7982377279027999999999099-9--38-------------
Q 003735 490 G--------SSIPASASKLLLQSIFNNTGGEVVIG-EGNKTEILGTPTETAILEFGLLLGG-D--FQ------------- 544 (799)
Q Consensus 490 ~--------~~~~~~~~~~l~~~~~~n~~~~~~~~-~~~~~~~~g~p~e~All~~a~~~g~-~--~~------------- 544 (799)
. .....+....+.....+|+++.+..+ ..+..+..|+|+|.|++.++.+.|. + ..
T Consensus 395 ~~~~~~~~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~~~~~~~g~p~E~Al~~~a~~~g~~~~~~~~i~~~~~~~~~~~ 474 (995)
T 3ar4_A 395 EVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNS 474 (995)
T ss_dssp CEEETTEECCGGGCHHHHHHHHHHHHSCCCEEEEETTTTEEEEESCHHHHHHHHHHHHHCTTCCCCTTSCTTTSTTHHHH
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHH
T ss_conf 10136643444455899999999987488805656889832554796479999999983996410001342010121015
Q ss_pred HHHHHCCEEEEECCCCCCCEEEEEEEECCC-----CEEEEECCCHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHH
Q ss_conf 885305237993488999518999970899-----479998382579997401001569907408998999999999999
Q 003735 545 AERQASKIVKVEPFNSVKKQMGVVIELPEG-----GFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKF 619 (799)
Q Consensus 545 ~~~~~~~i~~~~~F~s~~k~~~vi~~~~~~-----~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~ 619 (799)
..+..+++++.+||+|.||||+++++.+++ ++.+++||+||.|++.|+++.. ++...+++++.++.+.+.+++|
T Consensus 475 ~~~~~~~~~~~~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~-~~~~~~l~~~~~~~~~~~~~~~ 553 (995)
T 3ar4_A 475 VIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRV-GTTRVPMTGPVKEKILSVIKEW 553 (995)
T ss_dssp HHHHHEEEEEEEEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEE-TTEEEECCHHHHHHHHHHHHHH
T ss_pred HHHHHCCEEEEEECCCCCCEEEEEEECCCCCCCCCCEEEEECCCHHHHHHHCCHHHC-CCCCCCCCHHHHHHHHHHHHHH
T ss_conf 566417457774048888756999834898766644499975887999985405442-8973249999999999999987
Q ss_pred --HHHCCCEEEEEEEECCCCCCCC-------CCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHH
Q ss_conf --8700314568899839998889-------9998886146412113699920089999999858978999858998899
Q 003735 620 --ASEALRTLCLACMEIGNEFSAD-------APIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTA 690 (799)
Q Consensus 620 --a~~glr~i~~A~k~~~~~~~~~-------~~~~~~~~~llg~i~~~D~~R~~~~~~i~~l~~aGi~v~m~TGd~~~~a 690 (799)
+++|+|++++|||+++...... ....+.|++|+|+++++||+||+++++|+.|+++||+++|+|||+..+|
T Consensus 554 ~~a~~GlRvLa~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta 633 (995)
T 3ar4_A 554 GTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTA 633 (995)
T ss_dssp HHSTTCCEEEEEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEESSCHHHH
T ss_pred HHHHCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHH
T ss_conf 76305614889999834765111222340244553069489999852588966699999999986998999899978999
Q ss_pred HHHHHHCCCCCCC----CEEECCHHHHCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCCHHHH
Q ss_conf 9999992986699----343314222036998995263981599942822389999999874799799992994598764
Q 003735 691 KAIARECGILTDN----GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPAL 766 (799)
Q Consensus 691 ~~ia~~~gi~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~v~a~~~p~~K~~~v~~l~~~~g~~V~~~GDg~ND~~aL 766 (799)
.++|++|||...+ +.+++|.++..+.++++.+.+.+..+++|++|+||..+|+.+|++ |++|+|+|||.||+|||
T Consensus 634 ~~ia~~lgi~~~~~~i~~~~~~g~~~~~l~~~~~~~~~~~~~v~~r~~P~~K~~~v~~l~~~-g~~v~~~GDG~ND~~al 712 (995)
T 3ar4_A 634 IAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSY-DEITAMTGDGVNDAPAL 712 (995)
T ss_dssp HHHHHHHTSSCTTCCCTTTEEEHHHHHTSCHHHHHHHHHHCCEEESCCSSHHHHHHHHHHTT-TCCEEEEECSGGGHHHH
T ss_pred HHHHHHCCCCCCCCCCCCEEEECHHHHHCCHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHC-CCEEEEECCCCHHHHHH
T ss_conf 99999839677887535348983664628999999987537389970899999999999977-99799983881449999
Q ss_pred HCCCEEEECCCCCCHHHHHHCCC-----CHHHHHHHH
Q ss_conf 10992064189998989870178-----837688754
Q 003735 767 HEADIGLAMGIAGTEVELECCCF-----NFSSRKTYI 798 (799)
Q Consensus 767 ~~Advgiamg~~g~~~ak~~adi-----nf~siv~~i 798 (799)
++||+||||| +|++++|++||+ ||++++++|
T Consensus 713 k~Advgiamg-~g~~~ak~aAd~vl~~~~~~~i~~~i 748 (995)
T 3ar4_A 713 KKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAV 748 (995)
T ss_dssp HHSTEEEEET-TSCHHHHHTCSEEETTCCHHHHHHHH
T ss_pred HHCCEEEEEC-CCCHHHHHHCCEEECCCCHHHHHHHH
T ss_conf 8789679967-88999997388997778778999999
No 4
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1
Probab=1.00 E-value=1 Score=875.85 Aligned_cols=599 Identities=24% Similarity=0.392 Sum_probs=506.2
Q ss_pred CCHHH-HHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 79878-99982899359999119999999872499866889976099999999966799999999999887520026899
Q 003735 119 GGVEG-IAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWP 197 (799)
Q Consensus 119 ~gv~g-l~~~l~~~~~~Gl~~~~~~~~~r~~~~g~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~ 197 (799)
+++.+ ++..|+++...||+.++ +.+|++.||+|.++.++ .++|..++++|+++..++++++++++++++
T Consensus 70 ~~~~~~~~~~l~t~~~~GLs~~e--a~~r~~~~G~N~l~~~~-~~~~~~~l~~f~~~~~~ll~~aai~s~~~g------- 139 (920)
T 1mhs_A 70 GGGRVVPEDMLQTDTRVGLTSEE--VVQRRRKYGLNQMKEEK-ENHFLKFLGFFVGPIQFVMEGAAVLAAGLE------- 139 (920)
T ss_dssp HHHSCCSSTTTTTCCCCCCCSHH--HHHHHHHTSSSSCCCCC-CSSHHHHTHHHHHHHHHHHHHHHHHCTTCS-------
T ss_pred CCCCHHHHHHHCCCCCCCCCHHH--HHHHHHHCCCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------
T ss_conf 76203689985899579999999--99999963998158888-889999999998799999999999999997-------
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEECCCCCCCCEEEECCCCEECCCEEEE
Q ss_conf 87431589999999999999999999999999976351485569996994999763788866299956998530347999
Q 003735 198 KGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFV 277 (799)
Q Consensus 198 ~~~~d~~~i~~~illv~~~~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~I~~~~LvvGDii~i~~Gd~vPaDg~il 277 (799)
.|.+++.+++.+++..++..+.+|+.++..+.|.+ ..+..++|+|||++++|++++|||||+|.+++||+|||||+++
T Consensus 140 -~~~~~~~i~~vv~i~~~i~~~qe~~a~~a~~~L~~-l~~~~a~V~RdG~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~ll 217 (920)
T 1mhs_A 140 -DWVDFGVICGLLLLNAVVGFVQEFQAGSIVDELKK-TLALKAVVLRDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIV 217 (920)
T ss_dssp -CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTT-CCCSSCEEECSSSEEECCTTTSCTTSEEEECTTCBCSSEEEEE
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCCCCCCEEEE
T ss_conf -68999999999999999999999999999998633-5998799998998999898995889789967797336656999
Q ss_pred EECE-EEEECCCCCCCCCCCCCCCCCCEEECCCEEEECEEEEEEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
Q ss_conf 5250-699543465999740138999778706434414399999998051126789975147999999169999999999
Q 003735 278 SGFS-VLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATI 356 (799)
Q Consensus 278 ~g~~-l~vDeS~lTGEs~pv~k~~~~~~v~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~ 356 (799)
+|++ +.||||+|||||.|+.|..++ .+|+||.|.+|.++++|+++|.+|++|++.+++.+++..++|+|+.+++++.+
T Consensus 218 ~g~~~l~VDES~LTGES~PV~K~~gd-~v~sGT~v~~G~~~~~V~~tG~~T~~g~I~~lv~~a~~~~~~l~~~~~~i~~~ 296 (920)
T 1mhs_A 218 TDDAFLQVDQSALTGESLAVDKHKGD-QVFASSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHFTEVLNGIGTI 296 (920)
T ss_dssp EESSCCEEBCTTTSSCCCCEECCSSC-EECSCBCCSCCCEEEEEEECSTTCSTTTTTSSCCCCCCCCCHHHHHHHHHHHH
T ss_pred ECCCEEEEECCCCCCCCCCEEECCCC-EEECCCEEECCEEEEEEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
T ss_conf 45722320222247888646934798-63037669513599999995776788899887764246776499999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999887653025887445687563899999999999999880784369999999999999720224
Q 003735 357 IGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKA 436 (799)
Q Consensus 357 i~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvva~P~~Lplav~l~l~~~~~~l~~~~i 436 (799)
+..+.+.+++++|+.+ + +... .+...|..+++++|++||||||+++|++++.++.+|.++|+
T Consensus 297 l~~~~~~~~~i~~~~~---~------------~~~~---~~~~~l~~av~llV~aiP~aLp~~vti~la~g~~~mak~~i 358 (920)
T 1mhs_A 297 LLILVIFTLLIVWVSS---F------------YRSN---PIVQILEFTLAITIIGVPVGLPAVVTTTMAVGAAYLAKKKA 358 (920)
T ss_dssp HHHHHHHHHHHHHHTT---T------------TTTC---CHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHH---H------------HCCC---CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCE
T ss_conf 9999999999999998---8------------4688---69999999999998767603777789999999999986883
Q ss_pred HHCCCCHHHCCCCCEEEEECCCCCCCCCCEEEEEEEECCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEC
Q ss_conf 24151000014882168526777421274399999983835530699998888999993699999999985288507741
Q 003735 437 LVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIG 516 (799)
Q Consensus 437 lvr~~~alE~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~~~~~~~~ 516 (799)
+||++.++|+||++++||||||||||+|+|+|.+++..+.. + +.+ ++ ...++|+...
T Consensus 359 lvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m~v~~~~~~~g~---~------------~~~---ll-~~a~l~~~~~---- 415 (920)
T 1mhs_A 359 IVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYTVAGV---D------------PED---LM-LTACLAASRK---- 415 (920)
T ss_dssp CCCCTTTHHHHHTCCEEEEETBTTTBSSCSCCCCCBCCSCC---C------------CTH---HH-HHHHHSCCCS----
T ss_pred EEECCCHHHHHCCCCEEEECCCCCCCCCCEEEEEEEECCCC---C------------HHH---HH-HHHHHHCCCC----
T ss_conf 87057135554367689977888755553169998506998---9------------899---99-9999854776----
Q ss_pred CCCCEEECCCCHHHHHHHHHHHCCCCHHHHHHHCCEEEEECCCCCCCEEEEEEEECCCCEEEEECCCHHHHHHHCCCCCC
Q ss_conf 79823772790279999999990999388853052379934889995189999708994799983825799974010015
Q 003735 517 EGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLN 596 (799)
Q Consensus 517 ~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~i~~~~~F~s~~k~~~vi~~~~~~~~~~~~KGa~e~il~~c~~~~~ 596 (799)
.. .+||+|.|+++++...+.. ......+++++.+||+|.+|+|+++++.++++...++||+||.+++.|+.
T Consensus 416 ~~-----~~~P~e~Al~~~~~~~~~~-~~~~~~~~~~~~~pF~s~~k~ms~iv~~~~g~~~~~~KGape~il~~c~~--- 486 (920)
T 1mhs_A 416 KK-----GIDAIDKAFLKSLKYYPRA-KSVLSKYKVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFVLKTVEE--- 486 (920)
T ss_dssp SC-----SCCSHHHHHHHHHHHSSSC-CGGGSCCCEEEEEEEETTTTEEEEEECCSSSSCEEEEEECHHHHHHHCCC---
T ss_pred CC-----CCCHHHHHHHHHHHHCCCC-HHHCCCCCEEEEEECCCCCCEEEEEEEECCCCEEEEEECCHHHHHHHCCC---
T ss_conf 66-----8985899999999964631-01013553357861167788599999967991899990879999986135---
Q ss_pred CCCEEEECCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCC
Q ss_conf 69907408998999999999999870031456889983999888999988861464121136999200899999998589
Q 003735 597 SNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAG 676 (799)
Q Consensus 597 ~~g~~~~l~~~~~~~i~~~~~~~a~~glr~i~~A~k~~~~~~~~~~~~~~~~~~llg~i~~~D~~R~~~~~~i~~l~~aG 676 (799)
..+++++.++.+.+.+++|+.+|+|++++||+. .+.+++|+|++++.||+||+++++|+.|+++|
T Consensus 487 ----~~~~~~~~~~~~~~~~~~~a~~G~RvL~vA~~~-----------~e~~l~~lGli~i~Dp~R~ea~~aI~~l~~aG 551 (920)
T 1mhs_A 487 ----DHPIPEEVDQAYKNKVAEFATRGFRSLGVARKR-----------GEGSWEILGIMPCMDPPRHDTYKTVCEAKTLG 551 (920)
T ss_dssp ----SSCCCHHHHHHHHHHHHHHHTSSCCCCEECCCS-----------SSCSCCCCBBCCCCCCCCHHHHHHHHHHHHHT
T ss_pred ----CCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEC-----------CCCCCEEEEEEEEECCCCCCHHHHHHHHHHCC
T ss_conf ----678987889989999999986799799999832-----------66530788999973432101799999986257
Q ss_pred CEEEEECCCCHHHHHHHHHHCCCCC----CCCEEECCHHHHCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCE
Q ss_conf 7899985899889999999929866----993433142220369989952639815999428223899999998747997
Q 003735 677 ITVRMVTGDNINTAKAIARECGILT----DNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEV 752 (799)
Q Consensus 677 i~v~m~TGd~~~~a~~ia~~~gi~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~v~a~~~p~~K~~~v~~l~~~~g~~ 752 (799)
|+++|+|||+..||.++|+++||.. .+..+++|. ..++++++.+.+.+..+|+|++|+||..+|+.||++ |++
T Consensus 552 I~v~MiTGD~~~TA~aIA~~lGI~~~~~~~~~~~~~g~--~~~~~~el~~~~~~~~V~arv~P~~K~~iV~~Lq~~-g~~ 628 (920)
T 1mhs_A 552 LSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGLGGG--GDMPGSEVYDFVEAADGFAEVFPQHKYNVVEILQQR-GYL 628 (920)
T ss_dssp CEEEEEESSCHHHHHHHHHHHTSSCSCCCSSSSSSCBC--CCGGGGGGGTTTTTTSCEESCCSTHHHHHHHHHHTT-TCC
T ss_pred CEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCEEECCC--CCCCHHHHHHHHHHCEEEEEECHHHHHHHHHHHHHC-CCE
T ss_conf 44999838978999999998499965467541242276--558989999877518199983799999999999967-996
Q ss_pred EEEECCCCCCHHHHHCCCEEEECCCCCCHHHHHHCCC-----CHHHHHHHHC
Q ss_conf 9999299459876410992064189998989870178-----8376887549
Q 003735 753 VAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF-----NFSSRKTYIL 799 (799)
Q Consensus 753 V~~~GDg~ND~~aL~~Advgiamg~~g~~~ak~~adi-----nf~siv~~i~ 799 (799)
|+|+|||.||+|||++|||||||| +|++++|++||+ ||++|+++|.
T Consensus 629 Vam~GDGvNDapaLk~AdvGIAmg-~gtd~ak~aADiVl~~~~~~~I~~ai~ 679 (920)
T 1mhs_A 629 VAMTGDGVNDAPSLKKADTGIAVE-GSSDAARSAADIVFLAPGLGAIIDALK 679 (920)
T ss_dssp CEECCCCGGGHHHHHHSSEEEEET-TSCHHHHHSSSEEESSCCSHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHCCCCCCCC-CCCHHHHHHCCEEECCCCHHHHHHHHH
T ss_conf 999828810099998578674056-433999984680776797778999999
No 5
>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}
Probab=1.00 E-value=1 Score=870.33 Aligned_cols=608 Identities=23% Similarity=0.350 Sum_probs=490.7
Q ss_pred CCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 79878999828993599991199999998724998668899760999999999667999999999998875200268998
Q 003735 119 GGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPK 198 (799)
Q Consensus 119 ~gv~gl~~~l~~~~~~Gl~~~~~~~~~r~~~~g~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~~ 198 (799)
..+++++..|+++ ..||+.++ +.+|++.||+|.++.++ +++|+.++++|++++.++++++++++++++... +.+.
T Consensus 17 ~~~~~~~~~l~~~-~~GLs~~e--~~~r~~~~G~N~l~~~~-~~~~~~~l~~~~~p~~~il~~aaiis~~l~~~~-~~~~ 91 (885)
T 3b8c_A 17 IPIEEVFQQLKCS-REGLTTQE--GEDRIQIFGPNKLEEKK-ESKLLKFLGFMWNPLSWVMEMAAIMAIALANGD-GRPP 91 (885)
T ss_dssp SSTTCCTTTSSSC-SSCSTHHH--HHHHSSSCCSCCTTTTC-CCTTSSTTSCCCGGGSSHHHHHHHGGGGSSCCT-TSCS
T ss_pred CCHHHHHHHHCCC-CCCCCHHH--HHHHHHHCCCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCC
T ss_conf 9999999983899-99989999--99999851997158878-879999999999999999999999999997045-6630
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEECCCCCCCCEEEECCCCEECCCEEEEE
Q ss_conf 74315899999999999999999999999999763514855699969949997637888662999569985303479995
Q 003735 199 GAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVS 278 (799)
Q Consensus 199 ~~~d~~~i~~~illv~~~~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~I~~~~LvvGDii~i~~Gd~vPaDg~il~ 278 (799)
.|+|++.+++.+++..++..+.+++.++..+.|.+ ..+..++|+|||++++|++++|+|||+|.+++||+|||||++++
T Consensus 92 ~~~~~~~I~~~v~i~~~l~~~qe~ka~~al~~L~~-~~~~~a~V~RdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~ll~ 170 (885)
T 3b8c_A 92 DWQDFVGIICLLVINSTISFIEENNAGNAAAALMA-GLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLE 170 (885)
T ss_dssp CCTTHHHHHHHTTTTTTTTTTTTTTTTTHHHHTTT-SCSCCCCCCCSSCSCCCCTTTTCTTSBCCCCSSCCCSSCCCCCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEEECEEEEE
T ss_conf 18899999999999999999999999999999733-49986999999989998989979897899889999930359997
Q ss_pred ECEEEEECCCCCCCCCCCCCCCCCCEEECCCEEEECEEEEEEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 25069954346599974013899977870643441439999999805112678997514799999916999999999999
Q 003735 279 GFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIG 358 (799)
Q Consensus 279 g~~l~vDeS~lTGEs~pv~k~~~~~~v~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~i~ 358 (799)
|+++.||||+|||||.|+.|..++. +|+||.|.+|.++++|+++|.+|++|++.+++++ ..+++|+|+.+++++.++.
T Consensus 171 g~~l~VdES~LTGES~Pv~K~~g~~-v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~-~~~~~~lq~~~~~i~~~~~ 248 (885)
T 3b8c_A 171 GDPLKVDQSALTGESLPVTKHPGQE-VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TNQVGHFQKVLTAIGNFCI 248 (885)
T ss_dssp SSCBCCCCCSTTCCSSCCCBSSCCC-CCSCCCCCSCCCCCBCCSCTTTTTSTTCCCSCCS-CSCCSTTTTTTHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCEEECCCCC-CCCCEEEEEEEEEEEEEECCCCCHHHHHHHHHHC-CCCCCHHHHHHHHHHHHHH
T ss_conf 6754003444688886458348983-0267599511799999975730199999999864-6446849999999999999
Q ss_pred H-HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9-999999999999998876530258874456875638999999999999998807843699999999999997202242
Q 003735 359 K-IGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKAL 437 (799)
Q Consensus 359 ~-~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvva~P~~Lplav~l~l~~~~~~l~~~~il 437 (799)
. +++.++++++++| +. .+. .+...+..++++++++|||+||+++|+++++++.+|.++|++
T Consensus 249 ~~~~~~~~~~~~~~~----~~----~~~----------~~~~~~~~~v~llv~aiP~aLp~~vti~la~g~~r~ak~~il 310 (885)
T 3b8c_A 249 CSIAIGMVIEIIVMY----PI----QRR----------KYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAI 310 (885)
T ss_dssp HHHHHHHHHHSTTTT----TT----TCS----------CSTTHHHHHHHHTTTTCCSSTTTHHHHTTTHHHHHHTTTSCC
T ss_pred HHHHHHHHHHHHHHH----HH----CCC----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
T ss_conf 999999999999999----98----068----------699999999999999703689999999999999999719869
Q ss_pred HCCCCHHHCCCCCEEEEECCCCCCCCCCEEEEEEEECCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECC
Q ss_conf 41510000148821685267774212743999999838355306999988889999936999999999852885077417
Q 003735 438 VRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGE 517 (799)
Q Consensus 438 vr~~~alE~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~~~~~~~~~ 517 (799)
||+++++|+||++|+||||||||||+|+|+|.+.+.. .+. ...+ ..+++..+.++++.
T Consensus 311 vk~~~aiE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~--~~~-----------~~~~--~~~ll~~aa~~~~~------- 368 (885)
T 3b8c_A 311 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVE--VFC-----------KGVE--KDQVLLFAAMASRV------- 368 (885)
T ss_dssp CSSGGGHHHHTTCCCCEEECCCCCSCCCCCCCSCCCC--SSC-----------SSTT--HHHHHHHHHHHCCS-------
T ss_pred ECCCHHHHHHHCCCEEEECCCCCCCCCCEEEEEEEEE--CCC-----------CCCC--HHHHHHHHHHHHCC-------
T ss_conf 6895188897679989987998761685279987775--158-----------9999--99999999997278-------
Q ss_pred CCCEEECCCCHHHHHHHHHHHCCCCHHHHHHHCCEEEEECCCCCCCEEEEEEEECCCCEEEEECCCHHHHHHHCCCCCCC
Q ss_conf 98237727902799999999909993888530523799348899951899997089947999838257999740100156
Q 003735 518 GNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNS 597 (799)
Q Consensus 518 ~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~i~~~~~F~s~~k~~~vi~~~~~~~~~~~~KGa~e~il~~c~~~~~~ 597 (799)
.++||+|.|+++++.+ ..+.+..+++++.+||+|.+|+|+++++..++....++||+||.+++.|+.
T Consensus 369 -----~~~~p~~~Al~~~~~~----~~~~~~~~~~~~~~pF~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~---- 435 (885)
T 3b8c_A 369 -----ENQDAIDAAMVGMLAD----PKEARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILELAKA---- 435 (885)
T ss_dssp -----SSCCSHHHHHHHTTCC----TTCCCCSSCCBCCCCCCTTTCCCCCBBCSSSSCBCBCCCCSGGGTSSSSCC----
T ss_pred -----CCCCCHHHHHHHHHHC----HHHHHHCCCEEECCCCCCCCCEEEEEEEECCCCEEEEEECCHHHHHHHCCC----
T ss_conf -----8999158999998646----365762483220135785225689999804896899994889999976458----
Q ss_pred CCEEEECCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCC
Q ss_conf 99074089989999999999998700314568899839998889999888614641211369992008999999985897
Q 003735 598 NGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGI 677 (799)
Q Consensus 598 ~g~~~~l~~~~~~~i~~~~~~~a~~glr~i~~A~k~~~~~~~~~~~~~~~~~~llg~i~~~D~~R~~~~~~i~~l~~aGi 677 (799)
+++.++.+.+.+++++++|+|++++||++++... .+..+.+++|+|++++.||+||+++++|+.|+++||
T Consensus 436 -------~~~~~~~~~~~~~~~a~~G~rvl~vA~~~~~~~~---~~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l~~aGI 505 (885)
T 3b8c_A 436 -------SNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKT---KESPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGV 505 (885)
T ss_dssp -------CSTTTTTHHHHHHHHTTTTCEEEEECCBCCCSSS---SSCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHTTC
T ss_pred -------CHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCC---CCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHCCC
T ss_conf -------6445799999999998579869999994466433---111356757999999606661208999999997699
Q ss_pred EEEEECCCCHHHHHHHHHHCCCCCC--CCEEECCHHHHC-CCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCEEE
Q ss_conf 8999858998899999999298669--934331422203-6998995263981599942822389999999874799799
Q 003735 678 TVRMVTGDNINTAKAIARECGILTD--NGIAIEGPEFRE-KSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVA 754 (799)
Q Consensus 678 ~v~m~TGd~~~~a~~ia~~~gi~~~--~~~~~~g~~~~~-~~~~~~~~~~~~~~v~a~~~p~~K~~~v~~l~~~~g~~V~ 754 (799)
+++|+|||+..+|.++|+++||... ...++.|.++.. +++.++.+.+.+..+|+|++|+||..+|+.||++ |++|+
T Consensus 506 ~v~MiTGD~~~tA~~iA~~lGi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~arv~P~~K~~iV~~lq~~-g~~Va 584 (885)
T 3b8c_A 506 NVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKDANLASIPVEELIEKADGFAGVFPEHKYEIVKKLQER-KHIVG 584 (885)
T ss_dssp CCEEEESSCHHHHTHHHHTTTCTTCCSTTSSCCBGGGGTTSCCSCHHHHHHTSCCEECCCHHHHHHHHHHHHHT-TCCCC
T ss_pred CEEEECCCCHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHC-CCEEE
T ss_conf 68999399869999999980976466775144555312224635799998638689887899999999999977-99699
Q ss_pred EECCCCCCHHHHHCCCEEEECCCCCCHHHHHHCCC-----CHHHHHHHHC
Q ss_conf 99299459876410992064189998989870178-----8376887549
Q 003735 755 VTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF-----NFSSRKTYIL 799 (799)
Q Consensus 755 ~~GDg~ND~~aL~~Advgiamg~~g~~~ak~~adi-----nf~siv~~i~ 799 (799)
|+|||.||+|||++||+||||| +|+|++|++||+ ||++|+++|.
T Consensus 585 m~GDGvNDapaLk~AdvGIAmg-~gtd~ak~aADivl~~~~~~~I~~ai~ 633 (885)
T 3b8c_A 585 MTGDGVNDAPALKKADIGIAVA-DATDAARGASDIVLTEPGLSVIISAVL 633 (885)
T ss_dssp BCCCSSTTHHHHHHSSSCCCCS-SSHHHHGGGCSSCCSSCSHHHHTHHHH
T ss_pred EECCCCHHHHHHHHCCEEEEEC-CCCHHHHHHCCEEECCCCHHHHHHHHH
T ss_conf 9759812299998699759957-712999984340133576668999999
No 6
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=1.00 E-value=1 Score=703.58 Aligned_cols=606 Identities=24% Similarity=0.277 Sum_probs=463.1
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHCCH
Q ss_conf 00011056899998423344668675422233421146788765666222367842493345443203785789860798
Q 003735 42 TANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGGV 121 (799)
Q Consensus 42 ~~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~gv 121 (799)
+..|..+.|+.+.+.+++..++||+.+.++.+.|++. ..+..++...++..||.+.+.+.....+.++.+.+.+...+
T Consensus 13 Ca~Ca~~Ie~~L~~~~GV~~v~Vnl~~~~~~V~~d~~--~~~~~~i~~ai~~~Gy~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (723)
T 3j09_A 13 CAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEK--RIDFETIKRVIEDLGYGVVDEQAAVSAEVEHLSRMKRKLYV 90 (723)
T ss_dssp SHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTT--TCCHHHHHHHHHHHCCEESSCCCCCCCCCCCCCCSCCCSSS
T ss_pred CHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCC--CCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 6689999999984599953899975787799984788--68999999999843876543211110116889999999999
Q ss_pred HHHHH----HHCCCCCCCCCCCHHHHHHHHHHCCCCCCC--C----CCCCCHHHHHHHHHHHHHHHH------HHHHHHH
Q ss_conf 78999----828993599991199999998724998668--8----997609999999996679999------9999999
Q 003735 122 EGIAE----KLSTSITDGISTSEHLLNRRKEIYGINKFT--E----SPARGFWVYVWEALHDMTLMI------LAVCALV 185 (799)
Q Consensus 122 ~gl~~----~l~~~~~~Gl~~~~~~~~~r~~~~g~N~~~--~----~~~~~f~~~~~~~l~~~~~~i------l~i~a~i 185 (799)
+.++. .+.. .+..+. +.+-.+. . ..+.+|++.+|++++.....+ -..++++
T Consensus 91 ~~~~~~~~~~~~~---~~~~~~----------~~~~~~~l~~~~~~~~g~~~~~~a~~~l~~~~~~md~l~~l~~~~a~~ 157 (723)
T 3j09_A 91 AAFAGVLLLFLAH---FISLPY----------EDFVQLLIALPAIFYSGSSIFKAAFSALRRRTLNMDVMYSMGVGAAFL 157 (723)
T ss_dssp TTTTHHHHHHHTT---SSCSSS----------SCCSCCSTHHHHHHHHHHHHHHHTCCTTTTCSTTSCSSCSCHHHHHHH
T ss_pred HHHHHHHHHHHHH---HHCCCH----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
T ss_conf 9999999999999---740323----------789999999999999689999999999981889829999999999999
Q ss_pred HHHHHHCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HH--HHCCCEEEEEECCEEEEEECCCCCC
Q ss_conf 887520026-8998743158999999999999999999999999997----63--5148556999699499976378886
Q 003735 186 SLVVGIATE-GWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDL----DR--EKKKITVQVARNGFRRKISIYDLLP 258 (799)
Q Consensus 186 s~~~~~~~~-~~~~~~~d~~~i~~~illv~~~~~~~~~~~~~~~~~l----~~--~~~~~~v~V~R~g~~~~I~~~~Lvv 258 (799)
..++.+... +....||+...++++++++ ++|.+.++.++. .+ ...+..++|+|||++++|++++|+|
T Consensus 158 ~s~~~~~~~~~~~~~~~~~~~~i~~~~~i------g~~le~~~~~~~~~~i~~l~~l~~~~a~v~r~g~~~~i~~~~l~~ 231 (723)
T 3j09_A 158 ASVLSTAGVLPREYSFYETSVLLLAFLLL------GRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAV 231 (723)
T ss_dssp HHHHHHHTTTTCCCCCCTTHHHHHHHHHH------HHHHHHHHHTTCCCTTHHHHHTSCSEEEEEETTEEEEEEGGGCCT
T ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEHHHCCC
T ss_conf 99999985146632399999999999999------999999999999999988872699756999899899989899799
Q ss_pred CCEEEECCCCEECCCEEEEEECEEEEECCCCCCCCCCCCCCCCCCEEECCCEEEECEEEEEEEEECCCCHHHHHHHHHCC
Q ss_conf 62999569985303479995250699543465999740138999778706434414399999998051126789975147
Q 003735 259 GDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSE 338 (799)
Q Consensus 259 GDii~i~~Gd~vPaDg~il~g~~l~vDeS~lTGEs~pv~k~~~~~~v~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~ 338 (799)
||+|.+++||+|||||++++|++ .||||+|||||.|+.|..++. +|+||.+.+|.++++|+++|.+|.++++++++++
T Consensus 232 GDiv~v~~Ge~IPaDg~vl~G~~-~VdeS~LTGES~pv~K~~g~~-v~~Gt~~~~g~~~~~v~~~g~~T~l~~i~~lv~~ 309 (723)
T 3j09_A 232 GDIVIVRPGEKIPVDGVVVEGES-YVDESMISGEPVPVLKSKGDE-VFGATINNTGVLKIRATRVGGETLLAQIVKLVED 309 (723)
T ss_dssp TCEEEECTTCBCCSEEEEEECCE-EEECHHHHCCSSCEEECTTCE-ECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSS
T ss_pred CCEEEECCCCEEEEEEEEEECCE-EEECCCCCCCCCCEEECCCCE-ECCCEEEECCCEEEEEEEECCCCHHHHHHHHHHH
T ss_conf 98999889998856799997776-886000138876466368982-3041697067299999984674399999999997
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHH
Q ss_conf 99999916999999999999999999999999999887653025887445687563899999999999999880784369
Q 003735 339 GGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPL 418 (799)
Q Consensus 339 ~~~~~tplq~~l~~~a~~i~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvva~P~~Lpl 418 (799)
++.+++|+|+.+++++.++.++.+.+++++|++|.+. .+. .+...+..++++++++|||+||+
T Consensus 310 a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~-------~~~----------~~~~~~~~~i~vlvia~P~aL~l 372 (723)
T 3j09_A 310 AMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFI-------AHA----------PLLFAFTTLIAVLVVACPCAFGL 372 (723)
T ss_dssp SCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSS-------TTC----------TTCCSHHHHHHHHHHHSCTTHHH
T ss_pred HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------CCC----------CHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 5346983899999999999999999999999999985-------688----------69999999999997502678999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCEEEEECCCCCCCCCCEEEEEEEECCEEEEECCCCCCCCCCCCCCHHHH
Q ss_conf 99999999999972022424151000014882168526777421274399999983835530699998888999993699
Q 003735 419 AVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASAS 498 (799)
Q Consensus 419 av~l~l~~~~~~l~~~~ilvr~~~alE~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (799)
++|+++..++.++.++|+++|+++++|+||++++||||||||||+|+|+|.+++..+.. ..+.+
T Consensus 373 a~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~~~~~~~~----------------~~~~l 436 (723)
T 3j09_A 373 ATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNGD----------------ERELL 436 (723)
T ss_dssp HHHHHHHHHHHHHHTTTCEESSTTHHHHGGGCCEEEEEHHHHTSCSCCEEEEEEESSSC----------------HHHHH
T ss_pred HHHHHHHHHHHHHHHCCEEEECHHHHHHHHCCCEEEECCCCCCCCCCEEEEEEEECCCC----------------HHHHH
T ss_conf 99999999999999889389482899876249899984777552696279999807999----------------89999
Q ss_pred HHHHHHHHHCCCCEEEECCCCCEEECCCCHHHHHHHHHHHCCCCHHHHHHHCCEEEEECCCCCCCEEEEEEEECCCCEE-
Q ss_conf 9999999852885077417982377279027999999999099938885305237993488999518999970899479-
Q 003735 499 KLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFR- 577 (799)
Q Consensus 499 ~~l~~~~~~n~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~i~~~~~F~s~~k~~~vi~~~~~~~~~- 577 (799)
.+ +..+.. .+.||++.|+++++...+....+ ..+|.+ .++.+..
T Consensus 437 ~~---aa~~e~-------------~s~hP~~~Ai~~~a~~~~~~~~~---------~~~~~~----------~~g~g~~~ 481 (723)
T 3j09_A 437 RL---AAIAER-------------RSEHPIAEAIVKKALEHGIELGE---------PEKVEV----------IAGEGVVA 481 (723)
T ss_dssp HH---HHHHHT-------------TCCSHHHHHHHHHHHHTTCCCCS---------CCCCEE----------ETTTEEEE
T ss_pred HH---HHHHHC-------------CCCCCHHHHHHHHHHHCCCCCCC---------CCCEEE----------ECCCCEEE
T ss_conf 99---999850-------------49995428999999854998578---------644599----------66981699
Q ss_pred -EEECCCHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEEC
Q ss_conf -9983825799974010015699074089989999999999998700314568899839998889999888614641211
Q 003735 578 -VHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVG 656 (799)
Q Consensus 578 -~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~glr~i~~A~k~~~~~~~~~~~~~~~~~~llg~i~ 656 (799)
.++.|+++.+..... +.. ..+....+.++.+|.|++++|+ |++++|+++
T Consensus 482 ~~~~~g~~~~~~~~~~----------~~~----~~~~~~~~~~~~~g~~~~~va~----------------~~~~~G~i~ 531 (723)
T 3j09_A 482 DGILVGNKRLMEDFGV----------AVS----NEVELALEKLEREAKTAVIVAR----------------NGRVEGIIA 531 (723)
T ss_dssp TTEEEECHHHHHHTTC----------CCC----HHHHHHHHHHHTTTCEEEEEEE----------------TTEEEEEEE
T ss_pred EEEEECCHHHHHHCCC----------CCC----HHHHHHHHHHHHCCCEEEEEEE----------------CCEEEEEEE
T ss_conf 9999778999975499----------860----8999999999855982899978----------------999999996
Q ss_pred CCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEEECCHHHHCCCHHHHHHHCCCCEEEEECCCC
Q ss_conf 36999200899999998589789998589988999999992986699343314222036998995263981599942822
Q 003735 657 IKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM 736 (799)
Q Consensus 657 ~~D~~R~~~~~~i~~l~~aGi~v~m~TGd~~~~a~~ia~~~gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~a~~~p~ 736 (799)
++|++||+++++|+.|+++|++++|+|||+..++.++|+++||.. ++++.+|+
T Consensus 532 i~D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~---------------------------~~~~~~P~ 584 (723)
T 3j09_A 532 VSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL---------------------------VIAEVLPH 584 (723)
T ss_dssp EECCSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE---------------------------EECSCCTT
T ss_pred ECCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCE---------------------------EECCCCHH
T ss_conf 068752569999999997799799999989899999999859938---------------------------99268999
Q ss_pred CHHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCCEEEECCCCCCHHHHHHCCC-----CHHHHHHHH
Q ss_conf 38999999987479979999299459876410992064189998989870178-----837688754
Q 003735 737 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF-----NFSSRKTYI 798 (799)
Q Consensus 737 ~K~~~v~~l~~~~g~~V~~~GDg~ND~~aL~~Advgiamg~~g~~~ak~~adi-----nf~siv~~i 798 (799)
+|...|+.++++ +.|+|+|||.||+|||++||+||||| +|+|.+|++||+ ||..++++|
T Consensus 585 ~K~~~v~~l~~~--~~v~~vGDg~ND~~al~~A~vgiamg-~g~~~a~~~AD~vl~~~~~~~i~~~i 648 (723)
T 3j09_A 585 QKSEEVKKLQAK--EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAI 648 (723)
T ss_dssp CHHHHHHHHTTT--CCEEEEECSSTTHHHHHHSSEEEECC-CCSCCSSCCSSEECSSCCTTHHHHHH
T ss_pred HHHHHHHHHHCC--CEEEEEECCHHHHHHHHHCCEEEEEC-CCCHHHHHHCCEEEECCCHHHHHHHH
T ss_conf 999999998349--93999989823099995499879967-87599998699999679988999999
No 7
>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}
Probab=1.00 E-value=1 Score=690.38 Aligned_cols=511 Identities=25% Similarity=0.349 Sum_probs=419.1
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHH---HHHH---HHHC-----C------CCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 997609999999996679999999999---9887---5200-----2------689987431589999999999999999
Q 003735 158 SPARGFWVYVWEALHDMTLMILAVCAL---VSLV---VGIA-----T------EGWPKGAHDGLGIVMSILLVVFVTATS 220 (799)
Q Consensus 158 ~~~~~f~~~~~~~l~~~~~~il~i~a~---is~~---~~~~-----~------~~~~~~~~d~~~i~~~illv~~~~~~~ 220 (799)
..+.+||+.+|++++.....|..+.++ .+++ +.+. . .+....|||++.++++++++ +
T Consensus 128 ~~g~~f~~~a~~~l~~~~~~md~Lv~l~~~~a~~~S~~~~~~~~~~~~~~~~~~~~~~~yfe~a~~ii~~~ll------g 201 (736)
T 3rfu_A 128 WGGWPFFKRGWQSLKTGQLNMFTLIAMGIGVAWIYSMVAVLWPGVFPHAFRSQEGVVAVYFEAAAVITTLVLL------G 201 (736)
T ss_dssp TTTHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHHCGGGSCSSSSCSSSCCCCCHHHHHHHHHHHHH------H
T ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH------H
T ss_conf 9538999999999985589759999999999999999998631004420013567643089999999999999------9
Q ss_pred HHHHHHHHH-------HHHHHHCCCEEEEEE-CCEEEEEECCCCCCCCEEEECCCCEECCCEEEEEECEEEEECCCCCCC
Q ss_conf 999999999-------976351485569996-994999763788866299956998530347999525069954346599
Q 003735 221 DYKQSLQFK-------DLDREKKKITVQVAR-NGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGE 292 (799)
Q Consensus 221 ~~~~~~~~~-------~l~~~~~~~~v~V~R-~g~~~~I~~~~LvvGDii~i~~Gd~vPaDg~il~g~~l~vDeS~lTGE 292 (799)
+|.+.++.+ +|.+ ..+..++|+| ||++++|++++|+|||+|.|++||+|||||++++|++ .||||+||||
T Consensus 202 ~~le~~a~~~~~~ai~~L~~-l~p~~a~vv~~dg~~~~v~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~~-~VDES~LTGE 279 (736)
T 3rfu_A 202 QVLELKAREQTGSAIRALLK-LVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQEGRS-FVDESMVTGE 279 (736)
T ss_dssp HHHHHHHHCCCSSHHHHHTC-CCCCEEEEEETTEEEEEEETTTCCTTCEECCCSSEECCSCEEECSSCE-EEECSSSTTC
T ss_pred HHHHHHHHHHHHHHHHHHHH-CCCCEEEEEECCCEEEEEEHHHCCCCCEEEECCCCCCCCCEEEEECCE-EEEECCCCCC
T ss_conf 99999999999999999883-399889999529989998776689898899879975156379997866-7651235786
Q ss_pred CCCCCCCCCCCEEECCCEEEECEEEEEEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 97401389997787064344143999999980511267899751479999991699999999999999999999999999
Q 003735 293 SEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVM 372 (799)
Q Consensus 293 s~pv~k~~~~~~v~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~l~~~v~ 372 (799)
|.|+.|..++. +++||.+.+|.++++|+++|.+|.+++|++++.+++..++|+|+.+|+++.++.++.+.+++++|++|
T Consensus 280 S~Pv~K~~gd~-v~~Gt~~~~G~~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~v~~vl~ia~~~~~~w 358 (736)
T 3rfu_A 280 PIPVAKEASAK-VIGATINQTGSFVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWFVPAVILVAVLSFIVW 358 (736)
T ss_dssp SSCEEECTTCE-ECTTCEEESCCCCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEECCCCC-CCCCEEECCCEEEEEEEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 14278316886-77864861450999999841225999999999974326897999999999999999999999999999
Q ss_pred HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCEE
Q ss_conf 98876530258874456875638999999999999998807843699999999999997202242415100001488216
Q 003735 373 VQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATS 452 (799)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~ilvva~P~~Lplav~l~l~~~~~~l~~~~ilvr~~~alE~lg~v~~ 452 (799)
.+.. .. . .+...+..++++++++|||+||+++|+++..++.++.++|+++|+++++|+||++|+
T Consensus 359 ~~~~-------~~-~--------~~~~~l~~ai~vlviacPcaL~la~p~a~~~~~~~~a~~gilvk~~~alE~l~~v~~ 422 (736)
T 3rfu_A 359 ALLG-------PQ-P--------ALSYGLIAAVSVLIIACPCALGLATPMSIMVGVGKGAQSGVLIKNAEALERMEKVNT 422 (736)
T ss_dssp HHHC-------SS-S--------STTHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHHHHHHTTEEESCHHHHHHHTSCCE
T ss_pred HHHC-------CC-C--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECHHHHHHHHCCCCE
T ss_conf 9967-------87-3--------299999998774877324278888999999999997515133233789998627999
Q ss_pred EEECCCCCCCCCCEEEEEEEECCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCEEECCCCHHHHH
Q ss_conf 85267774212743999999838355306999988889999936999999999852885077417982377279027999
Q 003735 453 ICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAI 532 (799)
Q Consensus 453 Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~~~~~~~~~~~~~~~~g~p~e~Al 532 (799)
||||||||||+|+|+|.+++..+.. .++.+.+. ..+. ..+.||+++|+
T Consensus 423 i~fDKTGTLT~g~~~v~~i~~~~~~----------------~~~~l~~a---a~le-------------~~s~hPla~Ai 470 (736)
T 3rfu_A 423 LVVDKTGTLTEGHPKLTRIVTDDFV----------------EDNALALA---AALE-------------HQSEHPLANAI 470 (736)
T ss_dssp EEECCBTTTBCSSCEEEEEEESSSC----------------HHHHHHHH---HHHH-------------HSSCCHHHHHH
T ss_pred EEEECCCCCCCCCEEEEEEEECCCC----------------HHHHHHHH---HHHH-------------HCCCCHHHHHH
T ss_conf 9981898875895279999834887----------------78999999---9986-------------22899289999
Q ss_pred HHHHHHCCCCHHHHHHHCCEEEEECCCCCCCEEEEEEEECCCCEEEEECCCHHHHHHHCCCCCCCCCEEEECCHHHHHHH
Q ss_conf 99999909993888530523799348899951899997089947999838257999740100156990740899899999
Q 003735 533 LEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHL 612 (799)
Q Consensus 533 l~~a~~~g~~~~~~~~~~~i~~~~~F~s~~k~~~vi~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~i 612 (799)
++++...+... ....+|++..++. +.....+.. +.+|+++.+...+.. . ..+
T Consensus 471 v~~a~~~~~~~---------~~~~~f~~~~g~g-v~~~~~g~~---~~~G~~~~~~~~~~~----------~-----~~~ 522 (736)
T 3rfu_A 471 VHAAKEKGLSL---------GSVEAFEAPTGKG-VVGQVDGHH---VAIGNARLMQEHGGD----------N-----APL 522 (736)
T ss_dssp HHHHHTTCCCC---------CCCSCCCCCTTTE-EEECSSSSC---EEEESHHHHHHHCCC----------C-----HHH
T ss_pred HHHHHHCCCCC---------CCCCCCCCCCCCE-EEEEECCEE---EEECCHHHHHHCCCC----------H-----HHH
T ss_conf 99999659986---------6754320248865-899999989---997389999873997----------1-----678
Q ss_pred HHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHH
Q ss_conf 99999998700314568899839998889999888614641211369992008999999985897899985899889999
Q 003735 613 NETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKA 692 (799)
Q Consensus 613 ~~~~~~~a~~glr~i~~A~k~~~~~~~~~~~~~~~~~~llg~i~~~D~~R~~~~~~i~~l~~aGi~v~m~TGd~~~~a~~ 692 (799)
.+..+.++.+|+|++++|+ |.+++|++++.|++||+++++|+.|+++|++++|+|||+..++.+
T Consensus 523 ~~~~~~~~~~G~~vl~va~----------------d~~~~G~i~i~D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ 586 (736)
T 3rfu_A 523 FEKADELRGKGASVMFMAV----------------DGKTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEA 586 (736)
T ss_dssp HHHHHHHHHTTCEEEEEEE----------------TTEEEEEEEEECCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHH
T ss_pred HHHHHHHHHCCCEEEEEEE----------------CCEEEEEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHH
T ss_conf 9999999856986999987----------------998999998503220309999999998799499987989899999
Q ss_pred HHHHCCCCCCCCEEECCHHHHCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCCEE
Q ss_conf 99992986699343314222036998995263981599942822389999999874799799992994598764109920
Q 003735 693 IARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG 772 (799)
Q Consensus 693 ia~~~gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~a~~~p~~K~~~v~~l~~~~g~~V~~~GDg~ND~~aL~~Advg 772 (799)
+|+++||.. ++++.+|++|..+|+.+|++ |+.|+|+|||.||+|||++||+|
T Consensus 587 ia~~lgi~~---------------------------v~a~~~P~~K~~~v~~l~~~-g~~V~~vGDG~ND~paL~~AdvG 638 (736)
T 3rfu_A 587 VAGTLGIKK---------------------------VVAEIMPEDKSRIVSELKDK-GLIVAMAGDGVNDAPALAKADIG 638 (736)
T ss_dssp HHHHHTCCC---------------------------EECSCCHHHHHHHHHHHHHH-SCCEEEEECSSTTHHHHHHSSEE
T ss_pred HHHHCCCCE---------------------------EEEECCHHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHCCEE
T ss_conf 999859987---------------------------99706999999999999966-99899998985769999869977
Q ss_pred EECCCCCCHHHHHHCCC-----CHHHHHHHH
Q ss_conf 64189998989870178-----837688754
Q 003735 773 LAMGIAGTEVELECCCF-----NFSSRKTYI 798 (799)
Q Consensus 773 iamg~~g~~~ak~~adi-----nf~siv~~i 798 (799)
|||| +|+|++|++||+ |+..++++|
T Consensus 639 IAmg-~g~d~a~~~AD~vl~~~~~~~i~~ai 668 (736)
T 3rfu_A 639 IAMG-TGTDVAIESAGVTLLHGDLRGIAKAR 668 (736)
T ss_dssp EEES-SSCSHHHHHCSEEECSCCSTTHHHHH
T ss_pred EEEC-CCCHHHHHHCCEEECCCCHHHHHHHH
T ss_conf 9947-86599997699999269878999999
No 8
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=1.00 E-value=1 Score=657.10 Aligned_cols=504 Identities=25% Similarity=0.324 Sum_probs=403.4
Q ss_pred CCCCHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHCC-CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 97609999999996679999------999999988752002-68998743158999999999999999999999999997
Q 003735 159 PARGFWVYVWEALHDMTLMI------LAVCALVSLVVGIAT-EGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDL 231 (799)
Q Consensus 159 ~~~~f~~~~~~~l~~~~~~i------l~i~a~is~~~~~~~-~~~~~~~~d~~~i~~~illv~~~~~~~~~~~~~~~~~l 231 (799)
.+.+|++.+|++++.....+ -..++++..++.+.. .+..+.||+...+++.++++ ++|.+.++.++.
T Consensus 47 ~g~~~~~~a~~~l~~~~~~md~L~~l~~~~a~~~s~~~~~~~~~~~~~~~~~~~~i~~~~~i------g~~le~~~~~~~ 120 (645)
T 3j08_A 47 SGSSIFKAAFSALRRRTLNMDVMYSMGVGAAFLASVLSTAGVLPREYSFYETSVLLLAFLLL------GRTLEARAKSRT 120 (645)
T ss_dssp HHHHHHHHTCCTTTTCSGGGCCCCSCHHHHHHHHHHHHHHHHCCSCSSCCCSHHHHHHHHHH------HHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH------HHHHHHHHHHHH
T ss_conf 99999999999997489992899999999999999999986335632599999999999999------999999999999
Q ss_pred ----HH--HHCCCEEEEEECCEEEEEECCCCCCCCEEEECCCCEECCCEEEEEECEEEEECCCCCCCCCCCCCCCCCCEE
Q ss_conf ----63--514855699969949997637888662999569985303479995250699543465999740138999778
Q 003735 232 ----DR--EKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFL 305 (799)
Q Consensus 232 ----~~--~~~~~~v~V~R~g~~~~I~~~~LvvGDii~i~~Gd~vPaDg~il~g~~l~vDeS~lTGEs~pv~k~~~~~~v 305 (799)
.+ ...+..++|+|||++++|++++|+|||+|.+++||+|||||++++|++ .||||+|||||.|+.|.+++. +
T Consensus 121 ~~~l~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~~-~VdeS~LTGES~Pv~K~~g~~-v 198 (645)
T 3j08_A 121 GEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES-YVDESMISGEPVPVLKSKGDE-V 198 (645)
T ss_dssp CCCCHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECCE-EEECHHHHCCSSCEEECTTCE-E
T ss_pred HHHHHHHHCCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEEEEEEEEECCE-EEECCCCCCCCCCEECCCCCE-E
T ss_conf 99999986179997999999979998899979899999889998866899998868-998022469987656089997-4
Q ss_pred ECCCEEEECEEEEEEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 70643441439999999805112678997514799999916999999999999999999999999999887653025887
Q 003735 306 LSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGT 385 (799)
Q Consensus 306 ~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~l~~~v~~~~~~~~~~~~~~ 385 (799)
++||.+.+|.++++|+++|.+|.++++++++++++.+++|+|+.+++++.++.++.+.+++++|++|.+ . .+.
T Consensus 199 ~~Gt~~~~g~~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~---~----~~~ 271 (645)
T 3j08_A 199 FGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYF---I----AHA 271 (645)
T ss_dssp CTTCEECSSCEEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHCSSC---C----CSC
T ss_pred ECCEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---H----CCC
T ss_conf 166798257299999972774599999999997314698589999999999999999999999999999---5----698
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCEEEEECCCCCCCCCC
Q ss_conf 44568756389999999999999988078436999999999999972022424151000014882168526777421274
Q 003735 386 HWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNH 465 (799)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~ai~ilvva~P~~Lplav~l~l~~~~~~l~~~~ilvr~~~alE~lg~v~~Ic~DKTGTLT~n~ 465 (799)
.+...+..++++++++|||+||+++|+++..++.++.++|+++|+++++|++|++++||||||||||+|+
T Consensus 272 ----------~~~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~ 341 (645)
T 3j08_A 272 ----------PLLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGK 341 (645)
T ss_dssp ----------SCCCTTTTTHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTCCCCSSTTHHHHGGGCCEEEEEGGGTSSSSC
T ss_pred ----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHCCCEEEECCCCCCCCCC
T ss_conf ----------6999999999999987366899999999999999999779376681699986279999986866655897
Q ss_pred EEEEEEEECCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCEEECCCCHHHHHHHHHHHCCCCHHH
Q ss_conf 39999998383553069999888899999369999999998528850774179823772790279999999990999388
Q 003735 466 MTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQA 545 (799)
Q Consensus 466 m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~n~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~ 545 (799)
|+|.+++..+.. ..+.+.+ +..+.. .+.||++.|+++++...+....+
T Consensus 342 ~~v~~~~~~~~~----------------~~~~l~~---aa~~e~-------------~s~hPla~Aiv~~a~~~g~~~~~ 389 (645)
T 3j08_A 342 PEVTDLVPLNGD----------------ERELLRL---AAIAER-------------RSEHPIAEAIVKKALEHGIELGE 389 (645)
T ss_dssp CEEEEEEESSSC----------------HHHHHHH---HHHHHT-------------TCCSHHHHHHHHHHHHTTCCCCS
T ss_pred EEEEEEEECCCC----------------HHHHHHH---HHHHHH-------------CCCCHHHHHHHHHHHHCCCCCCC
T ss_conf 079999817999----------------7999999---999751-------------58874679999999965998678
Q ss_pred HHHHCCEEEEECCCCCCCEEEEEEEECCCCEE--EEECCCHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHC
Q ss_conf 85305237993488999518999970899479--9983825799974010015699074089989999999999998700
Q 003735 546 ERQASKIVKVEPFNSVKKQMGVVIELPEGGFR--VHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEA 623 (799)
Q Consensus 546 ~~~~~~i~~~~~F~s~~k~~~vi~~~~~~~~~--~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~g 623 (799)
..+|.+ .++.+.. .++.|+++.+..... +.. ..+....+.++.+|
T Consensus 390 ---------~~~~~~----------~~g~g~~~~~v~~g~~~~~~~~~~----------~~~----~~~~~~~~~~~~~g 436 (645)
T 3j08_A 390 ---------PEKVEV----------IAGEGVVADGILVGNKRLMEDFGV----------AVS----NEVELALEKLEREA 436 (645)
T ss_dssp ---------CCCCEE----------ETTTEEEETTEEEECHHHHHHTTC----------CCC----HHHHHHHHHHHTTT
T ss_pred ---------CCCEEE----------ECCCCEEEEEEEECCHHHHHHCCC----------CCC----HHHHHHHHHHHHCC
T ss_conf ---------653599----------658846999999887999975498----------751----88999999998559
Q ss_pred CCEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCC
Q ss_conf 31456889983999888999988861464121136999200899999998589789998589988999999992986699
Q 003735 624 LRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN 703 (799)
Q Consensus 624 lr~i~~A~k~~~~~~~~~~~~~~~~~~llg~i~~~D~~R~~~~~~i~~l~~aGi~v~m~TGd~~~~a~~ia~~~gi~~~~ 703 (799)
.|++++|+ +++++|+++++|++||+++++|+.|+++|++++|+|||+..++.++|+++|+..
T Consensus 437 ~~~l~va~----------------~~~~~G~i~~~D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~-- 498 (645)
T 3j08_A 437 KTAVIVAR----------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL-- 498 (645)
T ss_dssp CCCEEEEE----------------TTEEEEEEEEECCCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE--
T ss_pred CEEEEEEE----------------CCEEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCE--
T ss_conf 83899988----------------999999999348765679999999997799799990888799999999839978--
Q ss_pred CEEECCHHHHCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCCEEEECCCCCCHHH
Q ss_conf 34331422203699899526398159994282238999999987479979999299459876410992064189998989
Q 003735 704 GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVE 783 (799)
Q Consensus 704 ~~~~~g~~~~~~~~~~~~~~~~~~~v~a~~~p~~K~~~v~~l~~~~g~~V~~~GDg~ND~~aL~~Advgiamg~~g~~~a 783 (799)
++++.+|++|...|+.++++ +.|+|+|||.||+|||++||+||||| +|++.+
T Consensus 499 -------------------------~~~~~~P~~K~~~v~~l~~~--~~v~~vGDg~ND~~al~~A~vgiamg-~g~~~a 550 (645)
T 3j08_A 499 -------------------------VIAEVLPHQKSEEVKKLQAK--EVVAFVGDGINDAPALAQADLGIAVG-SGSDVA 550 (645)
T ss_dssp -------------------------EECSCCTTCHHHHHHHHTTT--CCEEEEECSSSCHHHHHHSSEEEEEC-CCSCCS
T ss_pred -------------------------EEEECCHHHHHHHHHHHHHC--CEEEEEECCHHHHHHHHHCCEEEEEC-CCCHHH
T ss_conf -------------------------99837877689999998609--95999969776899997599889948-875999
Q ss_pred HHHCCC-----CHHHHHHHH
Q ss_conf 870178-----837688754
Q 003735 784 LECCCF-----NFSSRKTYI 798 (799)
Q Consensus 784 k~~adi-----nf~siv~~i 798 (799)
|++||+ ||..++++|
T Consensus 551 ~~~AD~vl~~~~~~~i~~~i 570 (645)
T 3j08_A 551 VESGDIVLIRDDLRDVVAAI 570 (645)
T ss_dssp SCCSSSEESSCCTTHHHHHH
T ss_pred HHHCCEEEECCCHHHHHHHH
T ss_conf 98699999369988999999
No 9
>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*
Probab=1.00 E-value=1 Score=238.39 Aligned_cols=242 Identities=24% Similarity=0.347 Sum_probs=180.8
Q ss_pred HHHHHHHHHHHHHCCCCHHHCCCCCEEEEECCCCCCCCCCEEEEEEEECCEEEEECCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 99999720224241510000148821685267774212743999999838355306999988889999936999999999
Q 003735 426 FAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSI 505 (799)
Q Consensus 426 ~~~~~l~~~~ilvr~~~alE~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 505 (799)
.++.++.++|+++|++.++|.|+.+++||||||||||+|+|.|.+++ .. +.++.++
T Consensus 4 ~a~~~~~~~gil~k~~~~le~l~~i~~v~fDktGTLT~g~~~v~~~~--~~------------------~~~l~~~---- 59 (263)
T 2yj3_A 4 SLYEKMLHKGMIIKNSNVYEKIKEIDTIIFEKTGTLTYGTPIVTQFI--GD------------------SLSLAYA---- 59 (263)
Q ss_pred HHCCCCEEEECCCCCEEECCCCHHHHHHHHHHHCCCCHHHHHHHCCEEEEECCCCCCCEEEEEEEECCCCEEEEECCCHH
Q ss_conf 85288507741798237727902799999999909993888530523799348899951899997089947999838257
Q 003735 506 FNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASE 585 (799)
Q Consensus 506 ~~n~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~i~~~~~F~s~~k~~~vi~~~~~~~~~~~~KGa~e 585 (799)
++++ ..+.||...|+.+++...+..... ...| ....+.+....+.+..
T Consensus 60 -----~~~e-------~~s~hp~a~ai~~~~~~~g~~~~~---------~~~~----------~~~~G~g~~~~~~~~~- 107 (263)
T 2yj3_A 60 -----ASVE-------ALSSHPIAKAIVKYAKEQGVKILE---------VKDF----------KEISGIGVRGKISDKI- 107 (263)
Q ss_pred HHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCH
Q ss_conf 99974010015699074089989999999999998700314568899839998889999888614641211369992008
Q 003735 586 IILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGV 665 (799)
Q Consensus 586 ~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~glr~i~~A~k~~~~~~~~~~~~~~~~~~llg~i~~~D~~R~~~ 665 (799)
.. ++... ++.+ +.+ ..+..+.|.+.+.|+++|++
T Consensus 108 ~~----------------~G~~~-------------~~~~-~~~----------------~~~~~~~~~~~~~~~~~~g~ 141 (263)
T 2yj3_A 108 IE----------------VKKAE-------------NNND-IAV----------------YINGEPIASFNISDVPRPNL 141 (263)
Q ss_pred HHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEEECCHHHHCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHH
Q ss_conf 99999998589789998589988999999992986699343314222036998995263981599942822389999999
Q 003735 666 KESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHL 745 (799)
Q Consensus 666 ~~~i~~l~~aGi~v~m~TGd~~~~a~~ia~~~gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~a~~~p~~K~~~v~~l 745 (799)
.++++.|++.|+++.|+|||+...+..+++++|+.. +|+...|.+|...++.+
T Consensus 142 ~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~---------------------------~f~~~~p~~k~~~~~~l 194 (263)
T 2yj3_A 142 KDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQE---------------------------YYSNLSPEDKVRIIEKL 194 (263)
Q ss_pred HHHCCCEEEEECCCCCCHHHHHCCCEEEECCCCCCHHHHHHCCC-----CHHHHHHHH
Q ss_conf 87479979999299459876410992064189998989870178-----837688754
Q 003735 746 RTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF-----NFSSRKTYI 798 (799)
Q Consensus 746 ~~~~g~~V~~~GDg~ND~~aL~~Advgiamg~~g~~~ak~~adi-----nf~siv~~i 798 (799)
+.. ++.|+|+|||.||++|++.|++|++|| ++++.+++.+|+ ++..+..+|
T Consensus 195 ~~~-~~~~~~VGD~~~D~~aa~~Agv~va~g-~~~~~~~~~ad~v~~~~~l~~l~~~l 250 (263)
T 2yj3_A 195 KQN-GNKVLMIGDGVNDAAALALADVSVAMG-NGVDISKNVADIILVSNDIGTLLGLI 250 (263)
No 10
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=1.00 E-value=1 Score=194.28 Aligned_cols=262 Identities=29% Similarity=0.379 Sum_probs=195.7
Q ss_pred HHHHHHHHHHHHHCCCCHHHCCCCCEEEEECCCCCCCCCCEEEEEEEECCEEEEECCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 99999720224241510000148821685267774212743999999838355306999988889999936999999999
Q 003735 426 FAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSI 505 (799)
Q Consensus 426 ~~~~~l~~~~ilvr~~~alE~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 505 (799)
.+.+++.++|+++|++.++|+|+.+++||||||||||.+.+.+.+++..+. . .+.++++. .
T Consensus 8 ~~~~~~~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~--~--------------~~~~l~~~---~ 68 (287)
T 3a1c_A 8 HGSRKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG--D--------------ERELLRLA---A 68 (287)
T ss_dssp ------CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSS--C--------------HHHHHHHH---H
T ss_pred HHHHHHHHCCEEEECCHHHHHHHCCCEEEEECCCCCCCCCEEEEEEEECCC--C--------------HHHHHHHH---H
T ss_conf 157899879979968089988536999999689988289779999981799--9--------------99999999---9
Q ss_pred HHCCCCEEEECCCCCEEECCCCHHHHHHHHHHHCCCCHHHHHHHCCEEEEECCCCCCCEEEEEEEECCCCEE--EEECCC
Q ss_conf 852885077417982377279027999999999099938885305237993488999518999970899479--998382
Q 003735 506 FNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFR--VHCKGA 583 (799)
Q Consensus 506 ~~n~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~i~~~~~F~s~~k~~~vi~~~~~~~~~--~~~KGa 583 (799)
... . .+.||++.|+.+++...|...... .... ...+.+.. .+.+|.
T Consensus 69 ~~e------~-------~s~hp~~~a~~~~~~~~g~~~~~~----~~~~---------------~~~G~~~~~~~~~~g~ 116 (287)
T 3a1c_A 69 IAE------R-------RSEHPIAEAIVKKALEHGIELGEP----EKVE---------------VIAGEGVVADGILVGN 116 (287)
T ss_dssp HHT------T-------TCCSHHHHHHHHHHHHTTCCCCCC----SCEE---------------EETTTEEEETTEEEEC
T ss_pred HHH------H-------CCCCHHHHHHHHHHHHCCCCCCCC----CCCE---------------EECCCCEEEEEEEECC
T ss_conf 975------2-------179979999999998659985555----4414---------------6248872889999889
Q ss_pred HHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCC
Q ss_conf 57999740100156990740899899999999999987003145688998399988899998886146412113699920
Q 003735 584 SEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRP 663 (799)
Q Consensus 584 ~e~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~glr~i~~A~k~~~~~~~~~~~~~~~~~~llg~i~~~D~~R~ 663 (799)
++.+-.. +. ++. ..+....+.+..+|.+++++++ +..+.+.+...++++|
T Consensus 117 ~~~~~~~--------~~--~~~----~~~~~~~~~~~~~g~~~i~~~~----------------d~~~~~~~~~~~~~~~ 166 (287)
T 3a1c_A 117 KRLMEDF--------GV--AVS----NEVELALEKLEREAKTAVIVAR----------------NGRVEGIIAVSDTLKE 166 (287)
T ss_dssp HHHHHHT--------TC--CCC----HHHHHHHHHHHHTTCEEEEEEE----------------TTEEEEEEEEECCBCT
T ss_pred HHHHHHC--------CC--CCC----HHHHHHHHHHHHCCCEEEEEEE----------------CCEEEEEEEECCCCCH
T ss_conf 9999865--------99--750----7789999998747975999999----------------9989999995453614
Q ss_pred CHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEEECCHHHHCCCHHHHHHHCCCCEEEEECCCCCHHHHHH
Q ss_conf 08999999985897899985899889999999929866993433142220369989952639815999428223899999
Q 003735 664 GVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVK 743 (799)
Q Consensus 664 ~~~~~i~~l~~aGi~v~m~TGd~~~~a~~ia~~~gi~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~a~~~p~~K~~~v~ 743 (799)
++.++++.|+++|+++.++||++...+..+++.+|+.. +|....|..|...++
T Consensus 167 g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~---------------------------~f~~i~~~~K~~~~~ 219 (287)
T 3a1c_A 167 SAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL---------------------------VIAEVLPHQKSEEVK 219 (287)
T ss_dssp THHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE---------------------------EECSCCTTCHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCE---------------------------EEEECCHHHHHHHHH
T ss_conf 18999999997798599990989899999999809813---------------------------110058177999999
Q ss_pred HHHHHCCCEEEEECCCCCCHHHHHCCCEEEECCCCCCHHHHHHCCC-----CHHHHHHHH
Q ss_conf 9987479979999299459876410992064189998989870178-----837688754
Q 003735 744 HLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF-----NFSSRKTYI 798 (799)
Q Consensus 744 ~l~~~~g~~V~~~GDg~ND~~aL~~Advgiamg~~g~~~ak~~adi-----nf~siv~~i 798 (799)
.++.. +.++|+||+.||++|++.|+++++++ ++.+..++.+|+ ++..+...|
T Consensus 220 ~l~~~--~~~~~vGDs~~Di~~a~~ag~~v~~~-~~~~~~~~~ad~v~~~~~~~~l~~~l 276 (287)
T 3a1c_A 220 KLQAK--EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAI 276 (287)
T ss_dssp HHTTT--CCEEEEECTTTCHHHHHHSSEEEEEC-CCSCCSSCCSSEEESSSCTHHHHHHH
T ss_pred HHHCC--CEEEEEECCHHHHHHHHHCCEEEEEC-CCCHHHHHHCCEEEECCCHHHHHHHH
T ss_conf 98258--83999979777899999789529967-88778896299999479989999999
Done!