BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003737
(799 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 152/321 (47%), Gaps = 41/321 (12%)
Query: 86 DCSSATCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSP-QWASLQLVEL 144
DCS+ + + + L+G +S LK L++S N G P SLQ L
Sbjct: 218 DCSA----LQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQY--L 271
Query: 145 SVMGNRLSGPFPKVLTN-ITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGEL 203
S+ N+ +G P L+ TL L + GN F G++PP L+ L LSSN+F+GEL
Sbjct: 272 SLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGEL 331
Query: 204 PAE-LTKLTNLNDLRISDNNFSGKIPEFIGKWKK-------------------------- 236
P + L K+ L L +S N FSG++PE +
Sbjct: 332 PMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKN 391
Query: 237 -IQKLHIQGSSLEGPIPASISALTSLTDLRIS--DLKGS-ESAFPKLDKMNLKTLILTKC 292
+Q+L++Q + G IP ++S + L L +S L G+ S+ L K L+ L L
Sbjct: 392 TLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSK--LRDLKLWLN 449
Query: 293 LIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIFN 352
++ GEIP + + L+ + L FN+LTG IP+ N++ L+ N+LTG +PK+I
Sbjct: 450 MLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGR 509
Query: 353 SNKNVDISLNNFTWESSDPIE 373
+ L+N ++ + P E
Sbjct: 510 LENLAILKLSNNSFSGNIPAE 530
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 142/303 (46%), Gaps = 26/303 (8%)
Query: 89 SATCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQLVELSVMG 148
S +V++ L L+GT+P+ L L L+ L L N L G + ++ +E ++
Sbjct: 412 SNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILD 471
Query: 149 -NRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAEL 207
N L+G P L+N T L +S+ N TG IP I +L NL L LS+NSF+G +PAEL
Sbjct: 472 FNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAEL 531
Query: 208 TKLTNLNDLRISDNNFSGKIP------------EFIGKWKKI--------QKLHIQGSSL 247
+L L ++ N F+G IP FI + + ++ H G+ L
Sbjct: 532 GDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLL 591
Query: 248 E--GPIPASISALTSLTDLRISDLKGSESAFPKLDKM-NLKTLILTKCLIHGEIPDYIGD 304
E G ++ L++ I+ P D ++ L ++ ++ G IP IG
Sbjct: 592 EFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGS 651
Query: 305 MTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYI--FNSNKNVDISLN 362
M L ++L N+++G IP L N + L+ NKL G +P+ + +D+S N
Sbjct: 652 MPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNN 711
Query: 363 NFT 365
N +
Sbjct: 712 NLS 714
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 97/174 (55%), Gaps = 3/174 (1%)
Query: 91 TCHVVTIALKAQNLTGTLPTELSK--LRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVM 147
+ ++T+ L + N +G + L + L++L L N TG P ++ +LV L +
Sbjct: 364 SASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLS 423
Query: 148 GNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAEL 207
N LSG P L +++ L++L + N+ G IP ++ + L+ LIL N TGE+P+ L
Sbjct: 424 FNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGL 483
Query: 208 TKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSL 261
+ TNLN + +S+N +G+IP++IG+ + + L + +S G IPA + SL
Sbjct: 484 SNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSL 537
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 129/272 (47%), Gaps = 16/272 (5%)
Query: 87 CSSATCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELS 145
C + + + L+ TG +P LS L L LS N L+G+ SL +L +L
Sbjct: 386 CQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLK 445
Query: 146 VMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPA 205
+ N L G P+ L + TL+ L ++ N TG IP + NL + LS+N TGE+P
Sbjct: 446 LWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPK 505
Query: 206 ELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLR 265
+ +L NL L++S+N+FSG IP +G + + L + + G IPA++ + +
Sbjct: 506 WIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSG--KIA 563
Query: 266 ISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFN--NLT---- 319
+ + G + K D M +C G + ++ G ++ N + N N+T
Sbjct: 564 ANFIAGKRYVYIKNDGMK------KECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVY 617
Query: 320 -GGIPTTFEKLAKTNFMYLTGNKLTGPVPKYI 350
G TF+ F+ ++ N L+G +PK I
Sbjct: 618 GGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEI 649
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 121/265 (45%), Gaps = 23/265 (8%)
Query: 118 LKQLDLSRNCLTG---SFSPQWASLQLVELSVMGNRLSGPFPKVLTNITTLKNL------ 168
L LDLSRN L+G + + + L L+V N L FP ++ L +L
Sbjct: 99 LTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLD--FPGKVSGGLKLNSLEVLDLS 156
Query: 169 --SIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGK 226
SI G G + D L+ L +S N +G++ ++++ NL L +S NNFS
Sbjct: 157 ANSISGANVVGWVLSD--GCGELKHLAISGNKISGDV--DVSRCVNLEFLDVSSNNFSTG 212
Query: 227 IPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKT 286
IP F+G +Q L I G+ L G +IS T L L IS P L +L+
Sbjct: 213 IP-FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISS-NQFVGPIPPLPLKSLQY 270
Query: 287 LILTKCLIHGEIPDYI-GDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGP 345
L L + GEIPD++ G L +DLS N+ G +P F + + L+ N +G
Sbjct: 271 LSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGE 330
Query: 346 VPKYIF---NSNKNVDISLNNFTWE 367
+P K +D+S N F+ E
Sbjct: 331 LPMDTLLKMRGLKVLDLSFNEFSGE 355
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 72/142 (50%), Gaps = 8/142 (5%)
Query: 92 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQW---ASLQLVELSVMG 148
CH L+ Q G +L++L +++ G SP + S+ +++S
Sbjct: 584 CHGAGNLLEFQ---GIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSY-- 638
Query: 149 NRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELT 208
N LSG PK + ++ L L++ N +GSIP ++ L L L LSSN G +P ++
Sbjct: 639 NMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMS 698
Query: 209 KLTNLNDLRISDNNFSGKIPEF 230
LT L ++ +S+NN SG IPE
Sbjct: 699 ALTMLTEIDLSNNNLSGPIPEM 720
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%)
Query: 168 LSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKI 227
L + N+ +G IP +I + L L L N +G +P E+ L LN L +S N G+I
Sbjct: 634 LDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRI 693
Query: 228 PEFIGKWKKIQKLHIQGSSLEGPIP 252
P+ + + ++ + ++L GPIP
Sbjct: 694 PQAMSALTMLTEIDLSNNNLSGPIP 718
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 107/256 (41%), Gaps = 60/256 (23%)
Query: 123 LSRNCLTGSFSPQWASLQLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPD 182
LS + + GS S S L L + N LSGP +T +T+L + S
Sbjct: 81 LSNSHINGSVSGFKCSASLTSLDLSRNSLSGP----VTTLTSLGSCS------------- 123
Query: 183 IRKLINLQKLILSSNS--FTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKW------ 234
L+ L +SSN+ F G++ L KL +L L +S N+ SG +G W
Sbjct: 124 -----GLKFLNVSSNTLDFPGKVSGGL-KLNSLEVLDLSANSISGA--NVVG-WVLSDGC 174
Query: 235 KKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLI 294
+++ L I G+ + G + S +NL+ L ++
Sbjct: 175 GELKHLAISGNKISGDVDVSRC-------------------------VNLEFLDVSSNNF 209
Query: 295 HGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIFNSN 354
IP ++GD + L+++D+S N L+G + + ++ N+ GP+P S
Sbjct: 210 STGIP-FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSL 268
Query: 355 KNVDISLNNFTWESSD 370
+ + ++ N FT E D
Sbjct: 269 QYLSLAENKFTGEIPD 284
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 152/321 (47%), Gaps = 41/321 (12%)
Query: 86 DCSSATCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSP-QWASLQLVEL 144
DCS+ + + + L+G +S LK L++S N G P SLQ L
Sbjct: 221 DCSA----LQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQY--L 274
Query: 145 SVMGNRLSGPFPKVLTN-ITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGEL 203
S+ N+ +G P L+ TL L + GN F G++PP L+ L LSSN+F+GEL
Sbjct: 275 SLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGEL 334
Query: 204 PAE-LTKLTNLNDLRISDNNFSGKIPEFIGKWKK-------------------------- 236
P + L K+ L L +S N FSG++PE +
Sbjct: 335 PMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKN 394
Query: 237 -IQKLHIQGSSLEGPIPASISALTSLTDLRIS--DLKGS-ESAFPKLDKMNLKTLILTKC 292
+Q+L++Q + G IP ++S + L L +S L G+ S+ L K L+ L L
Sbjct: 395 TLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSK--LRDLKLWLN 452
Query: 293 LIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIFN 352
++ GEIP + + L+ + L FN+LTG IP+ N++ L+ N+LTG +PK+I
Sbjct: 453 MLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGR 512
Query: 353 SNKNVDISLNNFTWESSDPIE 373
+ L+N ++ + P E
Sbjct: 513 LENLAILKLSNNSFSGNIPAE 533
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 142/303 (46%), Gaps = 26/303 (8%)
Query: 89 SATCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQLVELSVMG 148
S +V++ L L+GT+P+ L L L+ L L N L G + ++ +E ++
Sbjct: 415 SNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILD 474
Query: 149 -NRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAEL 207
N L+G P L+N T L +S+ N TG IP I +L NL L LS+NSF+G +PAEL
Sbjct: 475 FNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAEL 534
Query: 208 TKLTNLNDLRISDNNFSGKIP------------EFIGKWKKI--------QKLHIQGSSL 247
+L L ++ N F+G IP FI + + ++ H G+ L
Sbjct: 535 GDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLL 594
Query: 248 E--GPIPASISALTSLTDLRISDLKGSESAFPKLDKM-NLKTLILTKCLIHGEIPDYIGD 304
E G ++ L++ I+ P D ++ L ++ ++ G IP IG
Sbjct: 595 EFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGS 654
Query: 305 MTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYI--FNSNKNVDISLN 362
M L ++L N+++G IP L N + L+ NKL G +P+ + +D+S N
Sbjct: 655 MPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNN 714
Query: 363 NFT 365
N +
Sbjct: 715 NLS 717
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 97/174 (55%), Gaps = 3/174 (1%)
Query: 91 TCHVVTIALKAQNLTGTLPTELSK--LRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVM 147
+ ++T+ L + N +G + L + L++L L N TG P ++ +LV L +
Sbjct: 367 SASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLS 426
Query: 148 GNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAEL 207
N LSG P L +++ L++L + N+ G IP ++ + L+ LIL N TGE+P+ L
Sbjct: 427 FNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGL 486
Query: 208 TKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSL 261
+ TNLN + +S+N +G+IP++IG+ + + L + +S G IPA + SL
Sbjct: 487 SNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSL 540
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 129/272 (47%), Gaps = 16/272 (5%)
Query: 87 CSSATCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELS 145
C + + + L+ TG +P LS L L LS N L+G+ SL +L +L
Sbjct: 389 CQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLK 448
Query: 146 VMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPA 205
+ N L G P+ L + TL+ L ++ N TG IP + NL + LS+N TGE+P
Sbjct: 449 LWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPK 508
Query: 206 ELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLR 265
+ +L NL L++S+N+FSG IP +G + + L + + G IPA++ + +
Sbjct: 509 WIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSG--KIA 566
Query: 266 ISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFN--NLT---- 319
+ + G + K D M +C G + ++ G ++ N + N N+T
Sbjct: 567 ANFIAGKRYVYIKNDGMK------KECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVY 620
Query: 320 -GGIPTTFEKLAKTNFMYLTGNKLTGPVPKYI 350
G TF+ F+ ++ N L+G +PK I
Sbjct: 621 GGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEI 652
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 125/266 (46%), Gaps = 25/266 (9%)
Query: 118 LKQLDLSRNCLTG---SFSPQWASLQLVELSVMGNRLSGPFPKVLTN---ITTLKNLSIE 171
L LDLSRN L+G + + + L L+V N L FP ++ + +L+ L +
Sbjct: 102 LTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLD--FPGKVSGGLKLNSLEVLDLS 159
Query: 172 GNLFTGSIPPDIRKLI------NLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSG 225
N +G+ ++ + L+ L +S N +G++ ++++ NL L +S NNFS
Sbjct: 160 ANSISGA---NVVGWVLSDGCGELKHLAISGNKISGDV--DVSRCVNLEFLDVSSNNFST 214
Query: 226 KIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLK 285
IP F+G +Q L I G+ L G +IS T L L IS P L +L+
Sbjct: 215 GIP-FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISS-NQFVGPIPPLPLKSLQ 272
Query: 286 TLILTKCLIHGEIPDYI-GDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTG 344
L L + GEIPD++ G L +DLS N+ G +P F + + L+ N +G
Sbjct: 273 YLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSG 332
Query: 345 PVPKYIF---NSNKNVDISLNNFTWE 367
+P K +D+S N F+ E
Sbjct: 333 ELPMDTLLKMRGLKVLDLSFNEFSGE 358
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 72/142 (50%), Gaps = 8/142 (5%)
Query: 92 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQW---ASLQLVELSVMG 148
CH L+ Q G +L++L +++ G SP + S+ +++S
Sbjct: 587 CHGAGNLLEFQ---GIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSY-- 641
Query: 149 NRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELT 208
N LSG PK + ++ L L++ N +GSIP ++ L L L LSSN G +P ++
Sbjct: 642 NMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMS 701
Query: 209 KLTNLNDLRISDNNFSGKIPEF 230
LT L ++ +S+NN SG IPE
Sbjct: 702 ALTMLTEIDLSNNNLSGPIPEM 723
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%)
Query: 168 LSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKI 227
L + N+ +G IP +I + L L L N +G +P E+ L LN L +S N G+I
Sbjct: 637 LDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRI 696
Query: 228 PEFIGKWKKIQKLHIQGSSLEGPIP 252
P+ + + ++ + ++L GPIP
Sbjct: 697 PQAMSALTMLTEIDLSNNNLSGPIP 721
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 107/256 (41%), Gaps = 60/256 (23%)
Query: 123 LSRNCLTGSFSPQWASLQLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPD 182
LS + + GS S S L L + N LSGP +T +T+L + S
Sbjct: 84 LSNSHINGSVSGFKCSASLTSLDLSRNSLSGP----VTTLTSLGSCS------------- 126
Query: 183 IRKLINLQKLILSSNS--FTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKW------ 234
L+ L +SSN+ F G++ L KL +L L +S N+ SG +G W
Sbjct: 127 -----GLKFLNVSSNTLDFPGKVSGGL-KLNSLEVLDLSANSISGA--NVVG-WVLSDGC 177
Query: 235 KKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLI 294
+++ L I G+ + G + S +NL+ L ++
Sbjct: 178 GELKHLAISGNKISGDVDVSRC-------------------------VNLEFLDVSSNNF 212
Query: 295 HGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIFNSN 354
IP ++GD + L+++D+S N L+G + + ++ N+ GP+P S
Sbjct: 213 STGIP-FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSL 271
Query: 355 KNVDISLNNFTWESSD 370
+ + ++ N FT E D
Sbjct: 272 QYLSLAENKFTGEIPD 287
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
Query: 662 QTGLYTLRQIKAATNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNR-EFV 720
Q ++LR+++ A++NF N +G GGFG VYKG L+DGT++AVK+L + QG +F
Sbjct: 24 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQ 83
Query: 721 NEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYMKNNCLS 760
E+ MIS H NL++L G C+ + LLVY YM N ++
Sbjct: 84 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVA 123
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 64/100 (64%), Gaps = 1/100 (1%)
Query: 662 QTGLYTLRQIKAATNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNR-EFV 720
Q ++LR+++ A++NF N +G GGFG VYKG L+DG ++AVK+L + QG +F
Sbjct: 16 QLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQ 75
Query: 721 NEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYMKNNCLS 760
E+ MIS H NL++L G C+ + LLVY YM N ++
Sbjct: 76 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVA 115
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 65/98 (66%)
Query: 668 LRQIKAATNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMIS 727
L ++ ATNNFD +G G FG VYKG+L DG +A+K+ + +S QG EF EI +S
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLS 90
Query: 728 AQQHPNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFG 765
+HP+LV L G C E N+++L+Y+YM+N L R ++G
Sbjct: 91 FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYG 128
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 65/98 (66%)
Query: 668 LRQIKAATNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMIS 727
L ++ ATNNFD +G G FG VYKG+L DG +A+K+ + +S QG EF EI +S
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLS 90
Query: 728 AQQHPNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFG 765
+HP+LV L G C E N+++L+Y+YM+N L R ++G
Sbjct: 91 FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYG 128
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 126/313 (40%), Gaps = 57/313 (18%)
Query: 37 HAEEVKALKQIGRKLGKKDWNFGVDPCSQKGNWELSSDDKKGFESNVTCDCSSATCHVVT 96
+ ++ +AL QI + LG + +W ++D V CD + T V
Sbjct: 4 NPQDKQALLQIKKDLGNP---------TTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNN 54
Query: 97 IALKAQNLTGT--LPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQLVELSVMGNRLSGP 154
+ L NL +P+ L+ L YL L + G N L GP
Sbjct: 55 LDLSGLNLPKPYPIPSSLANLPYLNFLYI------GGI----------------NNLVGP 92
Query: 155 FPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLN 214
P + +T L L I +G+IP + ++ L L S N+ +G LP ++ L NL
Sbjct: 93 IPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLV 152
Query: 215 DLRISDNNFSGKIPEFIGKWKKI-QKLHIQGSSLEGPIPASISALT-SLTDLRISDLKGS 272
+ N SG IP+ G + K+ + I + L G IP + + L + DL + L+G
Sbjct: 153 GITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGD 212
Query: 273 ESAFPKLDK----------------------MNLKTLILTKCLIHGEIPDYIGDMTKLKN 310
S DK NL L L I+G +P + + L +
Sbjct: 213 ASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHS 272
Query: 311 IDLSFNNLTGGIP 323
+++SFNNL G IP
Sbjct: 273 LNVSFNNLCGEIP 285
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 63/143 (44%), Gaps = 26/143 (18%)
Query: 208 TKLTNLNDLRISDNNFSGK--IPEFIGKWKKIQKLHIQG-SSLEGPIPASISALTSLTDL 264
T+ +N+L +S N IP + + L+I G ++L GPIP +I+ LT L L
Sbjct: 47 TQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYL 106
Query: 265 RISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPT 324
I T + G IPD++ + L +D S+N L+G +P
Sbjct: 107 YI-----------------------THTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPP 143
Query: 325 TFEKLAKTNFMYLTGNKLTGPVP 347
+ L + GN+++G +P
Sbjct: 144 SISSLPNLVGITFDGNRISGAIP 166
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 69/117 (58%), Gaps = 11/117 (9%)
Query: 653 DKELRGLDLQTGLYTLRQIKAATNNFDP------ANKVGEGGFGSVYKGILSDGTVIAVK 706
+K L D + ++ ++K TNNFD NK+GEGGFG VYKG +++ T +AVK
Sbjct: 2 NKSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVK 60
Query: 707 QLSS----KSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYMKNNCL 759
+L++ + + ++F EI +++ QH NLV+L G +G+ L LVY YM N L
Sbjct: 61 KLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL 117
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 69/117 (58%), Gaps = 11/117 (9%)
Query: 653 DKELRGLDLQTGLYTLRQIKAATNNFDP------ANKVGEGGFGSVYKGILSDGTVIAVK 706
+K L D + ++ ++K TNNFD NK+GEGGFG VYKG +++ T +AVK
Sbjct: 2 NKSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVK 60
Query: 707 QLSS----KSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYMKNNCL 759
+L++ + + ++F EI +++ QH NLV+L G +G+ L LVY YM N L
Sbjct: 61 KLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL 117
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 64/104 (61%), Gaps = 11/104 (10%)
Query: 666 YTLRQIKAATNNFDP------ANKVGEGGFGSVYKGILSDGTVIAVKQLSS----KSRQG 715
++ ++K TNNFD NK+GEGGFG VYKG +++ T +AVK+L++ + +
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 67
Query: 716 NREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYMKNNCL 759
++F EI +++ QH NLV+L G +G+ L LVY YM N L
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL 111
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 61/104 (58%), Gaps = 11/104 (10%)
Query: 666 YTLRQIKAATNNFDP------ANKVGEGGFGSVYKGILSDGTVIAVKQLSS----KSRQG 715
++ ++K TNNFD NK GEGGFG VYKG +++ T +AVK+L++ + +
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 64
Query: 716 NREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYMKNNCL 759
++F EI + + QH NLV+L G +G+ L LVY Y N L
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSL 108
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 52/92 (56%), Gaps = 6/92 (6%)
Query: 676 NNFDPANKVGEGGFGSVYKGIL------SDGTVIAVKQLSSKSRQGNREFVNEIGMISAQ 729
+N ++GEG FG V+ D ++AVK L S ++F E +++
Sbjct: 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL 72
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEYMKNNCLSR 761
QH ++VK YG CVEG+ L++V+EYMK+ L++
Sbjct: 73 QHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNK 104
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 6/85 (7%)
Query: 683 KVGEGGFGSVYKGIL------SDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVK 736
++GEG FG V+ D ++AVK L S ++F E +++ QH ++V+
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 84
Query: 737 LYGCCVEGNQLLLVYEYMKNNCLSR 761
+G C EG LL+V+EYM++ L+R
Sbjct: 85 FFGVCTEGRPLLMVFEYMRHGDLNR 109
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 6/85 (7%)
Query: 683 KVGEGGFGSVYKGIL------SDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVK 736
++GEG FG V+ D ++AVK L S ++F E +++ QH ++V+
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 78
Query: 737 LYGCCVEGNQLLLVYEYMKNNCLSR 761
+G C EG LL+V+EYM++ L+R
Sbjct: 79 FFGVCTEGRPLLMVFEYMRHGDLNR 103
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 6/85 (7%)
Query: 683 KVGEGGFGSVYKGIL------SDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVK 736
++GEG FG V+ D ++AVK L S ++F E +++ QH ++V+
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 107
Query: 737 LYGCCVEGNQLLLVYEYMKNNCLSR 761
+G C EG LL+V+EYM++ L+R
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDLNR 132
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 682 NKVGEGGFGSVYKGIL------SDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLV 735
++GEG FG V+ D ++AVK L + ++F E +++ QH ++V
Sbjct: 21 RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIV 80
Query: 736 KLYGCCVEGNQLLLVYEYMKNNCLSR 761
K YG C +G+ L++V+EYMK+ L++
Sbjct: 81 KFYGVCGDGDPLIMVFEYMKHGDLNK 106
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 681 ANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGC 740
++G G FG V+ G + +A+K + S + +F+ E ++ HP LV+LYG
Sbjct: 32 VQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSED-DFIEEAEVMMKLSHPKLVQLYGV 90
Query: 741 CVEGNQLLLVYEYMKNNCLS 760
C+E + LV+E+M++ CLS
Sbjct: 91 CLEQAPICLVFEFMEHGCLS 110
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 682 NKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCC 741
++G G FG V+ G + +A+K + + +F+ E ++ HP LV+LYG C
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 742 VEGNQLLLVYEYMKNNCLS 760
+E + LV+E+M++ CLS
Sbjct: 72 LEQAPICLVFEFMEHGCLS 90
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 681 ANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGC 740
++G G FG V+ G + +A+K + + +F+ E ++ HP LV+LYG
Sbjct: 15 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGV 73
Query: 741 CVEGNQLLLVYEYMKNNCLS 760
C+E + LV+E+M++ CLS
Sbjct: 74 CLEQAPICLVFEFMEHGCLS 93
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 62/129 (48%), Gaps = 11/129 (8%)
Query: 672 KAATNNFDPANKVGEGGFGSVYKGILSD-GTVIAVKQLSSKSRQGNREFVNEIGMISAQQ 730
K FD K+GEG +GSVYK I + G ++A+KQ+ +S +E + EI ++
Sbjct: 25 KQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCD 82
Query: 731 HPNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISA 790
P++VK YG + L +V EY +S I +LR T + I ++ S
Sbjct: 83 SPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDII--RLR------NKTLTEDEIATILQST 134
Query: 791 ANNIDFFFF 799
+++ F
Sbjct: 135 LKGLEYLHF 143
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 683 KVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCV 742
++G G FG V+ G + +A+K + + +F+ E ++ HP LV+LYG C+
Sbjct: 12 EIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCL 70
Query: 743 EGNQLLLVYEYMKNNCLS 760
E + LV+E+M++ CLS
Sbjct: 71 EQAPICLVFEFMEHGCLS 88
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 683 KVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCV 742
++G G FG V+ G + +A+K + + +F+ E ++ HP LV+LYG C+
Sbjct: 14 EIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 743 EGNQLLLVYEYMKNNCLS 760
E + LV+E+M++ CLS
Sbjct: 73 EQAPICLVFEFMEHGCLS 90
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 64/128 (50%), Gaps = 6/128 (4%)
Query: 673 AATNNFDPANKVGEGGFGSVYKGI-LSDGTVIAVKQLSSKSRQGN-REFVNEIGMISAQQ 730
++++ F K+G G + +VYKG+ + G +A+K++ S +G + EI ++ +
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELK 61
Query: 731 HPNLVKLYGCCVEGNQLLLVYEYMKNNCL----SRAIFGKLRIFHISIYATFPQGNIQIL 786
H N+V+LY N+L LV+E+M N+ SR + R +++ F +Q L
Sbjct: 62 HENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGL 121
Query: 787 IISAANNI 794
N I
Sbjct: 122 AFCHENKI 129
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 681 ANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGC 740
++G G FG V+ G + +A+K + + +F+ E ++ HP LV+LYG
Sbjct: 13 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGV 71
Query: 741 CVEGNQLLLVYEYMKNNCLS 760
C+E + LV E+M++ CLS
Sbjct: 72 CLEQAPICLVTEFMEHGCLS 91
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 684 VGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVE 743
VG G FG V K V A+KQ+ S+S + + F+ E+ +S HPN+VKLYG C+
Sbjct: 17 VGRGAFGVVCKAKWRAKDV-AIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGACL- 72
Query: 744 GNQLLLVYEYMKNNCLSRAIFG 765
N + LV EY + L + G
Sbjct: 73 -NPVCLVMEYAEGGSLYNVLHG 93
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 684 VGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVE 743
VG G FG V K V A+KQ+ S+S + + F+ E+ +S HPN+VKLYG C+
Sbjct: 16 VGRGAFGVVCKAKWRAKDV-AIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGACL- 71
Query: 744 GNQLLLVYEYMKNNCLSRAIFG 765
N + LV EY + L + G
Sbjct: 72 -NPVCLVMEYAEGGSLYNVLHG 92
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 7/86 (8%)
Query: 676 NNFDPANKVGEGGFGSVYK----GIL--SDGTVIAVKQLSSK-SRQGNREFVNEIGMISA 728
NN + +GEG FG V++ G+L T++AVK L + S +F E +++
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106
Query: 729 QQHPNLVKLYGCCVEGNQLLLVYEYM 754
+PN+VKL G C G + L++EYM
Sbjct: 107 FDNPNIVKLLGVCAVGKPMCLLFEYM 132
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 60/106 (56%), Gaps = 10/106 (9%)
Query: 658 GLDLQT-GLY--TLRQIKAATNNFDPAN------KVGEGGFGSVYKGILSDGTVIAV-KQ 707
G+DL T LY +++Q + T + +P + ++G+G FG VYK + +V+A K
Sbjct: 10 GVDLGTENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKV 69
Query: 708 LSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEY 753
+ +KS + +++ EI ++++ HPN+VKL N L ++ E+
Sbjct: 70 IDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEF 115
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 60/106 (56%), Gaps = 10/106 (9%)
Query: 658 GLDLQT-GLY--TLRQIKAATNNFDPAN------KVGEGGFGSVYKGILSDGTVIAV-KQ 707
G+DL T LY +++Q + T + +P + ++G+G FG VYK + +V+A K
Sbjct: 10 GVDLGTENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKV 69
Query: 708 LSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEY 753
+ +KS + +++ EI ++++ HPN+VKL N L ++ E+
Sbjct: 70 IDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEF 115
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 60/106 (56%), Gaps = 10/106 (9%)
Query: 658 GLDLQT-GLY--TLRQIKAATNNFDPAN------KVGEGGFGSVYKGILSDGTVIAV-KQ 707
G+DL T LY +++Q + T + +P + ++G+G FG VYK + +V+A K
Sbjct: 10 GVDLGTENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKV 69
Query: 708 LSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEY 753
+ +KS + +++ EI ++++ HPN+VKL N L ++ E+
Sbjct: 70 IDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEF 115
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 8/74 (10%)
Query: 674 ATNNFDPANKVGEGGFGSVYKG-ILSDGTVIAVKQLSSKSRQGN-------REFVNEIGM 725
A N + ++G+GGFG V+KG ++ D +V+A+K L +G +EF E+ +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 726 ISAQQHPNLVKLYG 739
+S HPN+VKLYG
Sbjct: 77 MSNLNHPNIVKLYG 90
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 8/74 (10%)
Query: 674 ATNNFDPANKVGEGGFGSVYKG-ILSDGTVIAVKQLSSKSRQGN-------REFVNEIGM 725
A N + ++G+GGFG V+KG ++ D +V+A+K L +G +EF E+ +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 726 ISAQQHPNLVKLYG 739
+S HPN+VKLYG
Sbjct: 77 MSNLNHPNIVKLYG 90
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 8/74 (10%)
Query: 674 ATNNFDPANKVGEGGFGSVYKG-ILSDGTVIAVKQLSSKSRQGN-------REFVNEIGM 725
A N + ++G+GGFG V+KG ++ D +V+A+K L +G +EF E+ +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 726 ISAQQHPNLVKLYG 739
+S HPN+VKLYG
Sbjct: 77 MSNLNHPNIVKLYG 90
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 674 ATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVK--QLSSKSRQGNREFVNEIGMISAQQ 730
+ NF K+GEG +G VYK G V+A+K +L +++ + EI ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 731 HPNLVKLYGCCVEGNQLLLVYEYMKNN 757
HPN+VKL N+L LV+E++ +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQD 87
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 674 ATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVK--QLSSKSRQGNREFVNEIGMISAQQ 730
+ NF K+GEG +G VYK G V+A+K +L +++ + EI ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 731 HPNLVKLYGCCVEGNQLLLVYEYMKNN 757
HPN+VKL N+L LV+E++ +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQD 87
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 674 ATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVK--QLSSKSRQGNREFVNEIGMISAQQ 730
+ NF K+GEG +G VYK G V+A+K +L +++ + EI ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 731 HPNLVKLYGCCVEGNQLLLVYEYMKNN 757
HPN+VKL N+L LV+E++ +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQD 87
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 674 ATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVK--QLSSKSRQGNREFVNEIGMISAQQ 730
+ NF K+GEG +G VYK G V+A+K +L +++ + EI ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 731 HPNLVKLYGCCVEGNQLLLVYEYMKNN 757
HPN+VKL N+L LV+E++ +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQD 87
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVK--QLSSKSRQGNREFVNEIGMISAQQHP 732
NF K+GEG +G VYK G V+A+K +L +++ + EI ++ HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 733 NLVKLYGCCVEGNQLLLVYEYMKNN 757
N+VKL N+L LV+E++ +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQD 87
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 674 ATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVK--QLSSKSRQGNREFVNEIGMISAQQ 730
+ NF K+GEG +G VYK G V+A+K +L +++ + EI ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 731 HPNLVKLYGCCVEGNQLLLVYEYMKNN 757
HPN+VKL N+L LV+E++ +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQD 88
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 674 ATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVK--QLSSKSRQGNREFVNEIGMISAQQ 730
+ NF K+GEG +G VYK G V+A+K +L +++ + EI ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 731 HPNLVKLYGCCVEGNQLLLVYEYMKNN 757
HPN+VKL N+L LV+E++ +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQD 90
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 674 ATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVK--QLSSKSRQGNREFVNEIGMISAQQ 730
+ NF K+GEG +G VYK G V+A+K +L +++ + EI ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 731 HPNLVKLYGCCVEGNQLLLVYEYMKNN 757
HPN+VKL N+L LV+E++ +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQD 89
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 674 ATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVK--QLSSKSRQGNREFVNEIGMISAQQ 730
+ NF K+GEG +G VYK G V+A+K +L +++ + EI ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 731 HPNLVKLYGCCVEGNQLLLVYEYMKNN 757
HPN+VKL N+L LV+E++ +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQD 88
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVK--QLSSKSRQGNREFVNEIGMISAQQHP 732
NF K+GEG +G VYK G V+A+K +L +++ + EI ++ HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 733 NLVKLYGCCVEGNQLLLVYEYMKNN 757
N+VKL N+L LV+E++ +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQD 87
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 674 ATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVK--QLSSKSRQGNREFVNEIGMISAQQ 730
+ NF K+GEG +G VYK G V+A+K +L +++ + EI ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 731 HPNLVKLYGCCVEGNQLLLVYEYMKNN 757
HPN+VKL N+L LV+E++ +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQD 89
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVK--QLSSKSRQGNREFVNEIGMISAQQHP 732
NF K+GEG +G VYK G V+A+K +L +++ + EI ++ HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 733 NLVKLYGCCVEGNQLLLVYEYMKNN 757
N+VKL N+L LV+E++ +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQD 87
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 674 ATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVK--QLSSKSRQGNREFVNEIGMISAQQ 730
+ NF K+GEG +G VYK G V+A+K +L +++ + EI ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 731 HPNLVKLYGCCVEGNQLLLVYEYMKNN 757
HPN+VKL N+L LV+E++ +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQD 88
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVK--QLSSKSRQGNREFVNEIGMISAQQHP 732
NF K+GEG +G VYK G V+A+K +L +++ + EI ++ HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 733 NLVKLYGCCVEGNQLLLVYEYMKNN 757
N+VKL N+L LV+E++ +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQD 86
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVK--QLSSKSRQGNREFVNEIGMISAQQHP 732
NF K+GEG +G VYK G V+A+K +L +++ + EI ++ HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 733 NLVKLYGCCVEGNQLLLVYEYMKNN 757
N+VKL N+L LV+E++ +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQD 86
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVK--QLSSKSRQGNREFVNEIGMISAQQHP 732
NF K+GEG +G VYK G V+A+K +L +++ + EI ++ HP
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 733 NLVKLYGCCVEGNQLLLVYEYMKNN 757
N+VKL N+L LV+E++ +
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQD 94
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 674 ATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVK--QLSSKSRQGNREFVNEIGMISAQQ 730
+ NF K+GEG +G VYK G V+A+K +L +++ + EI ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 731 HPNLVKLYGCCVEGNQLLLVYEYMKNN 757
HPN+VKL N+L LV+E++ +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQD 89
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVK--QLSSKSRQGNREFVNEIGMISAQQHP 732
NF K+GEG +G VYK G V+A+K +L +++ + EI ++ HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 733 NLVKLYGCCVEGNQLLLVYEYMKNN 757
N+VKL N+L LV+E++ +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQD 86
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 674 ATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVK--QLSSKSRQGNREFVNEIGMISAQQ 730
+ NF K+GEG +G VYK G V+A+K +L +++ + EI ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 731 HPNLVKLYGCCVEGNQLLLVYEYMKNN 757
HPN+VKL N+L LV+E++ +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQD 87
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVK--QLSSKSRQGNREFVNEIGMISAQQHP 732
NF K+GEG +G VYK G V+A+K +L +++ + EI ++ HP
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 733 NLVKLYGCCVEGNQLLLVYEYMKNN 757
N+VKL N+L LV+E++ +
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFLHQD 91
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 674 ATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVK--QLSSKSRQGNREFVNEIGMISAQQ 730
+ NF K+GEG +G VYK G V+A+K +L +++ + EI ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 731 HPNLVKLYGCCVEGNQLLLVYEYMKNN 757
HPN+VKL N+L LV+E++ +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQD 90
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVK--QLSSKSRQGNREFVNEIGMISAQQHP 732
NF K+GEG +G VYK G V+A+K +L +++ + EI ++ HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 733 NLVKLYGCCVEGNQLLLVYEYMKNN 757
N+VKL N+L LV+E++ +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQD 87
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 674 ATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVK--QLSSKSRQGNREFVNEIGMISAQQ 730
+ NF K+GEG +G VYK G V+A+K +L +++ + EI ++
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 731 HPNLVKLYGCCVEGNQLLLVYEYMKNN 757
HPN+VKL N+L LV+E++ +
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFLHQD 91
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 674 ATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVK--QLSSKSRQGNREFVNEIGMISAQQ 730
+ NF K+GEG +G VYK G V+A+K +L +++ + EI ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 731 HPNLVKLYGCCVEGNQLLLVYEYMKNN 757
HPN+VKL N+L LV+E++ +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQD 90
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVK--QLSSKSRQGNREFVNEIGMISAQQHP 732
NF K+GEG +G VYK G V+A+K +L +++ + EI ++ HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 733 NLVKLYGCCVEGNQLLLVYEYMKNN 757
N+VKL N+L LV+E++ +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQD 86
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVK--QLSSKSRQGNREFVNEIGMISAQQHP 732
NF K+GEG +G VYK G V+A+K +L +++ + EI ++ HP
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 733 NLVKLYGCCVEGNQLLLVYEYMKNN 757
N+VKL N+L LV+E++ +
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQD 94
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVK--QLSSKSRQGNREFVNEIGMISAQQHP 732
NF K+GEG +G VYK G V+A+K +L +++ + EI ++ HP
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 733 NLVKLYGCCVEGNQLLLVYEYMKNN 757
N+VKL N+L LV+E++ +
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQD 88
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 10/94 (10%)
Query: 677 NFDPANKVGEGGFGSVYKG-ILSDGTVIAVKQ------LSSKSRQGNREFVNEIGMISAQ 729
NF K+G G F VY+ L DG +A+K+ + +K+R + + EI ++
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARA---DCIKEIDLLKQL 89
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAI 763
HPN++K Y +E N+L +V E LSR I
Sbjct: 90 NHPNVIKYYASFIEDNELNIVLELADAGDLSRMI 123
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 674 ATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVK--QLSSKSRQGNREFVNEIGMISAQQ 730
+ NF K+GEG +G VYK G V+A+K +L +++ + EI ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 731 HPNLVKLYGCCVEGNQLLLVYEYM 754
HPN+VKL N+L LV+E++
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL 85
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 674 ATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVK--QLSSKSRQGNREFVNEIGMISAQQ 730
+ NF K+GEG +G VYK G V+A+K +L +++ + EI ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 731 HPNLVKLYGCCVEGNQLLLVYEYM 754
HPN+VKL N+L LV+E++
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL 87
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 674 ATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVK--QLSSKSRQGNREFVNEIGMISAQQ 730
+ NF K+GEG +G VYK G V+A+K +L +++ + EI ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 731 HPNLVKLYGCCVEGNQLLLVYEYM 754
HPN+VKL N+L LV+E++
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL 87
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 674 ATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVK--QLSSKSRQGNREFVNEIGMISAQQ 730
+ NF K+GEG +G VYK G V+A+K +L +++ + EI ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 731 HPNLVKLYGCCVEGNQLLLVYEYM 754
HPN+VKL N+L LV+E++
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL 86
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 50/82 (60%), Gaps = 7/82 (8%)
Query: 684 VGEGGFGSVYKGI-LSDGTVI----AVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKL 737
+G G FG+VYKGI + +G + A+K L+ + + N EF++E ++++ HP+LV+L
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 738 YGCCVEGNQLLLVYEYMKNNCL 759
G C+ + LV + M + CL
Sbjct: 106 LGVCLSPT-IQLVTQLMPHGCL 126
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVK--QLSSKSRQGNREFVNEIGMISAQQHP 732
NF K+GEG +G VYK G V+A+K +L +++ + EI ++ HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 733 NLVKLYGCCVEGNQLLLVYEYMKNN 757
N+VKL N+L LV+E++ +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHVHQD 86
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 50/82 (60%), Gaps = 7/82 (8%)
Query: 684 VGEGGFGSVYKGI-LSDGTVI----AVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKL 737
+G G FG+VYKGI + +G + A+K L+ + + N EF++E ++++ HP+LV+L
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 738 YGCCVEGNQLLLVYEYMKNNCL 759
G C+ + LV + M + CL
Sbjct: 83 LGVCLSPT-IQLVTQLMPHGCL 103
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 683 KVGEGGFGSV-YKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCC 741
K+GEG G V + S G ++AVK++ + +Q NE+ ++ QH N+V++Y
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86
Query: 742 VEGNQLLLVYEYMKNNCLS 760
+ G++L +V E+++ L+
Sbjct: 87 LVGDELWVVMEFLEGGALT 105
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 15/94 (15%)
Query: 684 VGEGGFGSVYKGIL------SDGTVIAVKQLSSKSRQGN-REFVNEIGMISAQQHPNLVK 736
+GEG FG V K + T +AVK L + R+ ++E ++ HP+++K
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 737 LYGCCVEGNQLLLVYEYMKNNCLSRAIFGKLRIF 770
LYG C + LLL+ EY K +G LR F
Sbjct: 91 LYGACSQDGPLLLIVEYAK--------YGSLRGF 116
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 683 KVGEGGFGSV-YKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCC 741
K+GEG G V + S G ++AVK++ + +Q NE+ ++ QH N+V++Y
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 90
Query: 742 VEGNQLLLVYEYMKNNCLS 760
+ G++L +V E+++ L+
Sbjct: 91 LVGDELWVVMEFLEGGALT 109
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 674 ATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVK--QLSSKSRQGNREFVNEIGMISAQQ 730
+ NF K+GEG +G VYK G V+A+K +L +++ + EI ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 731 HPNLVKLYGCCVEGNQLLLVYEYMKNN 757
HPN+VKL N+L LV+E++ +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHVDQD 90
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Query: 684 VGEGGFGSVYKGIL------SDGTVIAVKQLSSKSRQGN-REFVNEIGMISAQQHPNLVK 736
+GEG FG V K + T +AVK L + R+ ++E ++ HP+++K
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 737 LYGCCVEGNQLLLVYEYMKNNCL 759
LYG C + LLL+ EY K L
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSL 113
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 683 KVGEGGFGSV-YKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCC 741
K+GEG G V + S G ++AVK++ + +Q NE+ ++ QH N+V++Y
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 95
Query: 742 VEGNQLLLVYEYMKNNCLS 760
+ G++L +V E+++ L+
Sbjct: 96 LVGDELWVVMEFLEGGALT 114
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Query: 684 VGEGGFGSVYKGIL------SDGTVIAVKQLSSKSRQGN-REFVNEIGMISAQQHPNLVK 736
+GEG FG V K + T +AVK L + R+ ++E ++ HP+++K
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 737 LYGCCVEGNQLLLVYEYMKNNCL 759
LYG C + LLL+ EY K L
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSL 113
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 683 KVGEGGFGSV-YKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCC 741
K+GEG G V + S G ++AVK++ + +Q NE+ ++ QH N+V++Y
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 97
Query: 742 VEGNQLLLVYEYMKNNCLS 760
+ G++L +V E+++ L+
Sbjct: 98 LVGDELWVVMEFLEGGALT 116
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 683 KVGEGGFGSV-YKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCC 741
K+GEG G V + S G ++AVK++ + +Q NE+ ++ QH N+V++Y
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 217
Query: 742 VEGNQLLLVYEYMKNNCLS 760
+ G++L +V E+++ L+
Sbjct: 218 LVGDELWVVMEFLEGGALT 236
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 682 NKVGEGGFGSVYKGILSDGTV-IAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGC 740
+K+G G FG VY+G+ ++ +AVK L + + EF+ E ++ +HPNLV+L G
Sbjct: 17 HKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGV 75
Query: 741 CVEGNQLLLVYEYM 754
C ++ E+M
Sbjct: 76 CTREPPFYIITEFM 89
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 684 VGEGGFGSVYKGILSDGT-----VIAVKQLSSKSRQGNR-EFVNEIGMISAQQHPNLVKL 737
+G G FG VYKG+L + +A+K L + + R +F+ E G++ H N+++L
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 738 YGCCVEGNQLLLVYEYMKNNCLSR 761
G + ++++ EYM+N L +
Sbjct: 112 EGVISKYKPMMIITEYMENGALDK 135
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 683 KVGEGGFGSV-YKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCC 741
K+GEG G V + S G ++AVK++ + +Q NE+ ++ QH N+V++Y
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 140
Query: 742 VEGNQLLLVYEYMKNNCLS 760
+ G++L +V E+++ L+
Sbjct: 141 LVGDELWVVMEFLEGGALT 159
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 683 KVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNR--EFVNEIGMISAQQHPNLVKLYGC 740
K+G G FG+V++ G+ +AVK L + R EF+ E+ ++ +HPN+V G
Sbjct: 44 KIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGA 102
Query: 741 CVEGNQLLLVYEYMKNNCLSRAI 763
+ L +V EY+ L R +
Sbjct: 103 VTQPPNLSIVTEYLSRGSLYRLL 125
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 683 KVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNR--EFVNEIGMISAQQHPNLVKLYGC 740
K+G G FG+V++ G+ +AVK L + R EF+ E+ ++ +HPN+V G
Sbjct: 44 KIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGA 102
Query: 741 CVEGNQLLLVYEYMKNNCLSRAI 763
+ L +V EY+ L R +
Sbjct: 103 VTQPPNLSIVTEYLSRGSLYRLL 125
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVK--QLSSKSRQGNREFVNEIGMISAQQHP 732
NF K+GEG +G VYK G V+A+ +L +++ + EI ++ HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 733 NLVKLYGCCVEGNQLLLVYEYMKNN 757
N+VKL N+L LV+E++ +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQD 87
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVK--QLSSKSRQGNREFVNEIGMISAQQHP 732
NF K+GEG +G VYK G V+A+ +L +++ + EI ++ HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 733 NLVKLYGCCVEGNQLLLVYEYMKNN 757
N+VKL N+L LV+E++ +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQD 86
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 8/101 (7%)
Query: 682 NKVGEGGFGSV----YKGILSD-GTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVK 736
++G+G FGSV Y + + G V+AVK+L + + R+F EI ++ + QH N+VK
Sbjct: 20 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 79
Query: 737 LYGCCVEGNQ--LLLVYEYMKNNCLSRAIFG-KLRIFHISI 774
G C + L L+ EY+ L + K RI HI +
Sbjct: 80 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL 120
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 8/101 (7%)
Query: 682 NKVGEGGFGSV----YKGILSD-GTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVK 736
++G+G FGSV Y + + G V+AVK+L + + R+F EI ++ + QH N+VK
Sbjct: 15 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 74
Query: 737 LYGCCVEGNQ--LLLVYEYMKNNCLSRAIFG-KLRIFHISI 774
G C + L L+ EY+ L + K RI HI +
Sbjct: 75 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL 115
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 8/101 (7%)
Query: 682 NKVGEGGFGSV----YKGILSD-GTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVK 736
++G+G FGSV Y + + G V+AVK+L + + R+F EI ++ + QH N+VK
Sbjct: 47 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 106
Query: 737 LYGCCVEGNQ--LLLVYEYMKNNCLSRAIFG-KLRIFHISI 774
G C + L L+ EY+ L + K RI HI +
Sbjct: 107 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL 147
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 8/101 (7%)
Query: 682 NKVGEGGFGSV----YKGILSD-GTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVK 736
++G+G FGSV Y + + G V+AVK+L + + R+F EI ++ + QH N+VK
Sbjct: 14 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 73
Query: 737 LYGCCVEGNQ--LLLVYEYMKNNCLSRAIFG-KLRIFHISI 774
G C + L L+ EY+ L + K RI HI +
Sbjct: 74 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL 114
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 682 NKVGEGGFGSVYKGILSDGTV-IAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGC 740
+K+G G +G VY+G+ ++ +AVK L + + EF+ E ++ +HPNLV+L G
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGV 82
Query: 741 CVEGNQLLLVYEYM 754
C ++ E+M
Sbjct: 83 CTREPPFYIIIEFM 96
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 8/101 (7%)
Query: 682 NKVGEGGFGSV----YKGILSD-GTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVK 736
++G+G FGSV Y + + G V+AVK+L + + R+F EI ++ + QH N+VK
Sbjct: 21 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 80
Query: 737 LYGCCVEGNQ--LLLVYEYMKNNCLSRAIFG-KLRIFHISI 774
G C + L L+ EY+ L + K RI HI +
Sbjct: 81 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL 121
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 8/101 (7%)
Query: 682 NKVGEGGFGSV----YKGILSD-GTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVK 736
++G+G FGSV Y + + G V+AVK+L + + R+F EI ++ + QH N+VK
Sbjct: 22 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 81
Query: 737 LYGCCVEGNQ--LLLVYEYMKNNCLSRAIFG-KLRIFHISI 774
G C + L L+ EY+ L + K RI HI +
Sbjct: 82 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL 122
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 8/101 (7%)
Query: 682 NKVGEGGFGSV----YKGILSD-GTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVK 736
++G+G FGSV Y + + G V+AVK+L + + R+F EI ++ + QH N+VK
Sbjct: 19 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 737 LYGCCVEGNQ--LLLVYEYMKNNCLSRAIFG-KLRIFHISI 774
G C + L L+ EY+ L + K RI HI +
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL 119
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 8/101 (7%)
Query: 682 NKVGEGGFGSV----YKGILSD-GTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVK 736
++G+G FGSV Y + + G V+AVK+L + + R+F EI ++ + QH N+VK
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 737 LYGCCVEGNQ--LLLVYEYMKNNCLSRAIFG-KLRIFHISI 774
G C + L L+ EY+ L + K RI HI +
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL 116
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 8/101 (7%)
Query: 682 NKVGEGGFGSV----YKGILSD-GTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVK 736
++G+G FGSV Y + + G V+AVK+L + + R+F EI ++ + QH N+VK
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 737 LYGCCVEGNQ--LLLVYEYMKNNCLSRAIFG-KLRIFHISI 774
G C + L L+ EY+ L + K RI HI +
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL 116
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 8/101 (7%)
Query: 682 NKVGEGGFGSV----YKGILSD-GTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVK 736
++G+G FGSV Y + + G V+AVK+L + + R+F EI ++ + QH N+VK
Sbjct: 23 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 82
Query: 737 LYGCCVEGNQ--LLLVYEYMKNNCLSRAIFG-KLRIFHISI 774
G C + L L+ EY+ L + K RI HI +
Sbjct: 83 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL 123
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 8/101 (7%)
Query: 682 NKVGEGGFGSV----YKGILSD-GTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVK 736
++G+G FGSV Y + + G V+AVK+L + + R+F EI ++ + QH N+VK
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 737 LYGCCVEGNQ--LLLVYEYMKNNCLSRAIFG-KLRIFHISI 774
G C + L L+ EY+ L + K RI HI +
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL 116
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 678 FDPANKVGEGGFGSVYKGI-LSDGTVIAVKQLSSKSRQGN---REFVNEIGMISAQQHPN 733
F ++G G FG+VY + + V+A+K++S +Q N ++ + E+ + +HPN
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 734 LVKLYGCCVEGNQLLLVYEYMKNNCLSRA 762
++ GC + + LV EY CL A
Sbjct: 77 TIQYRGCYLREHTAWLVMEY----CLGSA 101
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Query: 658 GLDLQT-GLY--TLRQIKAATNNFDPANKVGEGGFGSVYKGILSDGTV-IAVKQLSSKSR 713
G+DL T LY ++ + + + +K+G G +G VY G+ ++ +AVK L +
Sbjct: 11 GVDLGTENLYFQSMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTM 70
Query: 714 QGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYM 754
+ EF+ E ++ +HPNLV+L G C +V EYM
Sbjct: 71 E-VEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYM 110
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 682 NKVGEGGFGSVYKGILSDGTV-IAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGC 740
+K+G G +G VY+G+ ++ +AVK L + + EF+ E ++ +HPNLV+L G
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGV 82
Query: 741 CVEGNQLLLVYEYM 754
C ++ E+M
Sbjct: 83 CTREPPFYIITEFM 96
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Query: 672 KAATNNFDPANKVGEGGFGSVYKGILSDGTVIAVK--QLSSKSRQGNREFVNEIGMISAQ 729
+ + KVGEG +G VYK S G ++A+K +L ++ + EI ++
Sbjct: 17 QGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKEL 76
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEYMKNN 757
HPN+V L L LV+E+M+ +
Sbjct: 77 HHPNIVSLIDVIHSERCLTLVFEFMEKD 104
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 676 NNFDPANKVGEGGFGSVYKGILSDGTVIAVK--QLSSKSRQGNREFVNEIGMISAQQHPN 733
+ KVGEG +G VYK S G ++A+K +L ++ + EI ++ HPN
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 734 LVKLYGCCVEGNQLLLVYEYMKNN 757
+V L L LV+E+M+ +
Sbjct: 81 IVSLIDVIHSERCLTLVFEFMEKD 104
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 8/101 (7%)
Query: 682 NKVGEGGFGSV----YKGILSD-GTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVK 736
++G+G FGSV Y + + G V+AVK+L + + R+F EI ++ + QH N+VK
Sbjct: 17 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 76
Query: 737 LYGCCVEGNQ--LLLVYEYMKNNCLSRAIFG-KLRIFHISI 774
G C + L L+ EY+ L + K RI HI +
Sbjct: 77 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL 117
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 678 FDPANKVGEGGFGSVYKGI-LSDGTVIAVKQLSSKSRQGN---REFVNEIGMISAQQHPN 733
F ++G G FG+VY + + V+A+K++S +Q N ++ + E+ + +HPN
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 734 LVKLYGCCVEGNQLLLVYEYMKNNCLSRA 762
++ GC + + LV EY CL A
Sbjct: 116 TIQYRGCYLREHTAWLVMEY----CLGSA 140
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 682 NKVGEGGFGSVYKGILSDGTV-IAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGC 740
+K+G G +G VY+G+ ++ +AVK L + + EF+ E ++ +HPNLV+L G
Sbjct: 17 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 741 CVEGNQLLLVYEYM 754
C ++ E+M
Sbjct: 76 CTREPPFYIIIEFM 89
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 8/101 (7%)
Query: 682 NKVGEGGFGSV----YKGILSD-GTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVK 736
++G+G FGSV Y + + G V+AVK+L + + R+F EI ++ + QH N+VK
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 737 LYGCCVEGNQ--LLLVYEYMKNNCLSRAIFG-KLRIFHISI 774
G C + L L+ EY+ L + K RI HI +
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL 134
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 682 NKVGEGGFGSVYKGILSDGTV-IAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGC 740
+K+G G +G VY+G+ ++ +AVK L + + EF+ E ++ +HPNLV+L G
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGV 77
Query: 741 CVEGNQLLLVYEYM 754
C ++ E+M
Sbjct: 78 CTREPPFYIITEFM 91
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 682 NKVGEGGFGSVYKGILSDGTV-IAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGC 740
+K+G G +G VY+G+ ++ +AVK L + + EF+ E ++ +HPNLV+L G
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGV 82
Query: 741 CVEGNQLLLVYEYM 754
C ++ E+M
Sbjct: 83 CTREPPFYIITEFM 96
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 682 NKVGEGGFGSVYKGILSDGTV-IAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGC 740
+K+G G +G VY+G+ ++ +AVK L + + EF+ E ++ +HPNLV+L G
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 741 CVEGNQLLLVYEYM 754
C ++ E+M
Sbjct: 78 CTREPPFYIIIEFM 91
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 682 NKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCC 741
++G G FG V G +A+K + S + EF+ E ++ H LV+LYG C
Sbjct: 10 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLYGVC 68
Query: 742 VEGNQLLLVYEYMKNNCL 759
+ + ++ EYM N CL
Sbjct: 69 TKQRPIFIITEYMANGCL 86
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 682 NKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCC 741
++G G FG V G +A+K + S + EF+ E ++ H LV+LYG C
Sbjct: 15 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 742 VEGNQLLLVYEYMKNNCL 759
+ + ++ EYM N CL
Sbjct: 74 TKQRPIFIITEYMANGCL 91
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 8/101 (7%)
Query: 682 NKVGEGGFGSV----YKGILSD-GTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVK 736
++G+G FGSV Y + + G V+AVK+L + + R+F EI ++ + QH N+VK
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 737 LYGCCVEGNQ--LLLVYEYMKNNCLSRAIFG-KLRIFHISI 774
G C + L L+ EY+ L + K RI HI +
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL 134
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 682 NKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCC 741
++G G FG V G +A+K + S + EF+ E ++ H LV+LYG C
Sbjct: 14 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLYGVC 72
Query: 742 VEGNQLLLVYEYMKNNCL 759
+ + ++ EYM N CL
Sbjct: 73 TKQRPIFIITEYMANGCL 90
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 682 NKVGEGGFGSVYKGILSDGTV-IAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGC 740
+K+G G +G VY+G+ ++ +AVK L + + EF+ E ++ +HPNLV+L G
Sbjct: 20 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGV 78
Query: 741 CVEGNQLLLVYEYM 754
C ++ E+M
Sbjct: 79 CTREPPFYIIIEFM 92
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 682 NKVGEGGFGSVYKGILSDGTV-IAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGC 740
+K+G G +G VY+G+ ++ +AVK L + + EF+ E ++ +HPNLV+L G
Sbjct: 23 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGV 81
Query: 741 CVEGNQLLLVYEYM 754
C ++ E+M
Sbjct: 82 CTREPPFYIITEFM 95
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 682 NKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCC 741
++G G FG V G +A+K + S + EF+ E ++ H LV+LYG C
Sbjct: 30 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 742 VEGNQLLLVYEYMKNNCL 759
+ + ++ EYM N CL
Sbjct: 89 TKQRPIFIITEYMANGCL 106
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 682 NKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCC 741
++G G FG V G +A+K + S + EF+ E ++ H LV+LYG C
Sbjct: 30 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 742 VEGNQLLLVYEYMKNNCL 759
+ + ++ EYM N CL
Sbjct: 89 TKQRPIFIITEYMANGCL 106
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 682 NKVGEGGFGSVYKGILSDGTV-IAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGC 740
+K+G G +G VY+G+ ++ +AVK L + + EF+ E ++ +HPNLV+L G
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGV 77
Query: 741 CVEGNQLLLVYEYM 754
C ++ E+M
Sbjct: 78 CTREPPFYIITEFM 91
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 682 NKVGEGGFGSVYKGILSDGTV-IAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGC 740
+K+G G +G VY+G+ ++ +AVK L + + EF+ E ++ +HPNLV+L G
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGV 77
Query: 741 CVEGNQLLLVYEYM 754
C ++ E+M
Sbjct: 78 CTREPPFYIIIEFM 91
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 682 NKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCC 741
++G G FG V G +A+K + S + EF+ E ++ H LV+LYG C
Sbjct: 21 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLYGVC 79
Query: 742 VEGNQLLLVYEYMKNNCL 759
+ + ++ EYM N CL
Sbjct: 80 TKQRPIFIITEYMANGCL 97
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 682 NKVGEGGFGSVYKGILSDGTV-IAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGC 740
+K+G G +G VY+G+ ++ +AVK L + + EF+ E ++ +HPNLV+L G
Sbjct: 21 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGV 79
Query: 741 CVEGNQLLLVYEYM 754
C ++ E+M
Sbjct: 80 CTREPPFYIITEFM 93
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 682 NKVGEGGFGSVYKGILSDGTV-IAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGC 740
+K+G G +G VY+G+ ++ +AVK L + + EF+ E ++ +HPNLV+L G
Sbjct: 21 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGV 79
Query: 741 CVEGNQLLLVYEYM 754
C ++ E+M
Sbjct: 80 CTREPPFYIITEFM 93
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 682 NKVGEGGFGSVYKGILSDGTV-IAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGC 740
+K+G G +G VY+G+ ++ +AVK L + + EF+ E ++ +HPNLV+L G
Sbjct: 17 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGV 75
Query: 741 CVEGNQLLLVYEYM 754
C ++ E+M
Sbjct: 76 CTREPPFYIITEFM 89
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 682 NKVGEGGFGSVYKGILSDGTV-IAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGC 740
+K+G G +G VY+G+ ++ +AVK L + + EF+ E ++ +HPNLV+L G
Sbjct: 20 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGV 78
Query: 741 CVEGNQLLLVYEYM 754
C ++ E+M
Sbjct: 79 CTREPPFYIITEFM 92
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 682 NKVGEGGFGSVYKGILSDGTV-IAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGC 740
+K+G G +G VY+G+ ++ +AVK L + + EF+ E ++ +HPNLV+L G
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 741 CVEGNQLLLVYEYM 754
C ++ E+M
Sbjct: 78 CTREPPFYIITEFM 91
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 682 NKVGEGGFGSVYKGILSDGTV-IAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGC 740
+K+G G +G VY+G+ ++ +AVK L + + EF+ E ++ +HPNLV+L G
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 741 CVEGNQLLLVYEYM 754
C ++ E+M
Sbjct: 83 CTREPPFYIITEFM 96
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 682 NKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCC 741
++G G FG V G +A+K + S + EF+ E ++ H LV+LYG C
Sbjct: 15 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 742 VEGNQLLLVYEYMKNNCL 759
+ + ++ EYM N CL
Sbjct: 74 TKQRPIFIITEYMANGCL 91
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 682 NKVGEGGFGSVYKGILSDGTV-IAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGC 740
+K+G G +G VY+G+ ++ +AVK L + + EF+ E ++ +HPNLV+L G
Sbjct: 21 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGV 79
Query: 741 CVEGNQLLLVYEYM 754
C ++ E+M
Sbjct: 80 CTREPPFYIITEFM 93
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 682 NKVGEGGFGSVYKGILSDGTV-IAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGC 740
+K+G G +G VY+G+ ++ +AVK L + + EF+ E ++ +HPNLV+L G
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGV 77
Query: 741 CVEGNQLLLVYEYM 754
C ++ E+M
Sbjct: 78 CTREPPFYIITEFM 91
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 682 NKVGEGGFGSVYKGILSDGTV-IAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGC 740
+K+G G +G VY+G+ ++ +AVK L + + EF+ E ++ +HPNLV+L G
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 741 CVEGNQLLLVYEYM 754
C ++ E+M
Sbjct: 83 CTREPPFYIITEFM 96
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 8/101 (7%)
Query: 682 NKVGEGGFGSV----YKGILSD-GTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVK 736
++G+G FGSV Y + + G V+AVK+L + + R+F EI ++ + QH N+VK
Sbjct: 19 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 737 LYGCCVEGNQ--LLLVYEYMKNNCLSRAIFGKL-RIFHISI 774
G C + L L+ EY+ L + RI HI +
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKL 119
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 682 NKVGEGGFGSVYKGILSDGTV-IAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGC 740
+K+G G +G VY+G+ ++ +AVK L + + EF+ E ++ +HPNLV+L G
Sbjct: 32 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGV 90
Query: 741 CVEGNQLLLVYEYM 754
C ++ E+M
Sbjct: 91 CTREPPFYIITEFM 104
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 682 NKVGEGGFGSVYKGILSDGTV-IAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGC 740
+K+G G +G VY+G+ ++ +AVK L + + EF+ E ++ +HPNLV+L G
Sbjct: 226 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 284
Query: 741 CVEGNQLLLVYEYM 754
C ++ E+M
Sbjct: 285 CTREPPFYIITEFM 298
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 8/100 (8%)
Query: 683 KVGEGGFGSV----YKGILSD-GTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKL 737
++G+G FGSV Y + + G V+AVK+L + + R+F EI ++ + QH N+VK
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 738 YGCCVEGNQ--LLLVYEYMKNNCLSRAIFG-KLRIFHISI 774
G C + L L+ E++ L + K RI HI +
Sbjct: 80 KGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKL 119
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 682 NKVGEGGFGSVYKGILSDGTV-IAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGC 740
+K+G G +G VY+G+ ++ +AVK L + + EF+ E ++ +HPNLV+L G
Sbjct: 265 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 323
Query: 741 CVEGNQLLLVYEYM 754
C ++ E+M
Sbjct: 324 CTREPPFYIITEFM 337
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Query: 669 RQIKAATNNFDP------ANKVGEGGFGSVYKGILSD-GTVIAVKQLSSKSRQGNREFVN 721
R+ + + DP ++G+G FG VYK + G + A K + +KS + +++
Sbjct: 6 REYEHVRRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIV 65
Query: 722 EIGMISAQQHPNLVKLYGCCVEGNQLLLVYEY 753
EI +++ HP +VKL G +L ++ E+
Sbjct: 66 EIEILATCDHPYIVKLLGAYYHDGKLWIMIEF 97
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 682 NKVGEGGFGSVYKGILSDGTV-IAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGC 740
+K+G G +G VY+G+ ++ +AVK L + + EF+ E ++ +HPNLV+L G
Sbjct: 223 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 281
Query: 741 CVEGNQLLLVYEYM 754
C ++ E+M
Sbjct: 282 CTREPPFYIITEFM 295
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 11/128 (8%)
Query: 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQ---- 729
T F K+G G FGSV+K + DG + A+K+ S K G+ + N + + A
Sbjct: 6 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKR-SKKPLAGSVDEQNALREVYAHAVLG 64
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIIS 789
QH ++V+ + E + +L+ EY L+ AI RI + F + ++ L++
Sbjct: 65 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIM-----SYFKEAELKDLLLQ 119
Query: 790 AANNIDFF 797
+ +
Sbjct: 120 VGRGLRYI 127
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 11/128 (8%)
Query: 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQ---- 729
T F K+G G FGSV+K + DG + A+K+ S K G+ + N + + A
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKR-SKKPLAGSVDEQNALREVYAHAVLG 68
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIIS 789
QH ++V+ + E + +L+ EY L+ AI RI + F + ++ L++
Sbjct: 69 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIM-----SYFKEAELKDLLLQ 123
Query: 790 AANNIDFF 797
+ +
Sbjct: 124 VGRGLRYI 131
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 11/128 (8%)
Query: 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQ---- 729
T F K+G G FGSV+K + DG + A+K+ S K G+ + N + + A
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKR-SKKPLAGSVDEQNALREVYAHAVLG 66
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIIS 789
QH ++V+ + E + +L+ EY L+ AI RI + F + ++ L++
Sbjct: 67 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIM-----SYFKEAELKDLLLQ 121
Query: 790 AANNIDFF 797
+ +
Sbjct: 122 VGRGLRYI 129
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 11/128 (8%)
Query: 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQ---- 729
T F K+G G FGSV+K + DG + A+K+ S K G+ + N + + A
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKR-SKKPLAGSVDEQNALREVYAHAVLG 66
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIIS 789
QH ++V+ + E + +L+ EY L+ AI RI + F + ++ L++
Sbjct: 67 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIM-----SYFKEAELKDLLLQ 121
Query: 790 AANNIDFF 797
+ +
Sbjct: 122 VGRGLRYI 129
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Query: 682 NKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCC 741
++G G FG V G +AVK + S + EF E + HP LVK YG C
Sbjct: 14 KELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSED-EFFQEAQTMMKLSHPKLVKFYGVC 72
Query: 742 VEGNQLLLVYEYMKNNCL 759
+ + +V EY+ N CL
Sbjct: 73 SKEYPIYIVTEYISNGCL 90
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 684 VGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFV----NEIGMISAQQHPNLVKLYG 739
+G GGFG VY+ G +AVK + + + E + + +HPN++ L G
Sbjct: 15 IGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRG 73
Query: 740 CCVEGNQLLLVYEYMKNNCLSRAIFGK 766
C++ L LV E+ + L+R + GK
Sbjct: 74 VCLKEPNLCLVMEFARGGPLNRVLSGK 100
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 6/66 (9%)
Query: 684 VGEGGFGSVYKGIL--SDGTV--IAVK--QLSSKSRQGNREFVNEIGMISAQQHPNLVKL 737
+GEG FGSV +G L DGT +AVK +L + S++ EF++E + HPN+++L
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 738 YGCCVE 743
G C+E
Sbjct: 102 LGVCIE 107
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 682 NKVGEGGFGSVYKGI-LSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGC 740
K+G+G G+VY + ++ G +A++Q++ + + +NEI ++ ++PN+V
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 741 CVEGNQLLLVYEYMKNNCLSRAI 763
+ G++L +V EY+ L+ +
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVV 108
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 682 NKVGEGGFGSVYKGI-LSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGC 740
K+G+G G+VY + ++ G +A++Q++ + + +NEI ++ ++PN+V
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 741 CVEGNQLLLVYEYMKNNCLSRAI 763
+ G++L +V EY+ L+ +
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVV 108
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 682 NKVGEGGFGSVYKGI-LSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGC 740
K+G+G G+VY + ++ G +A++Q++ + + +NEI ++ ++PN+V
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 741 CVEGNQLLLVYEYMKNNCLSRAI 763
+ G++L +V EY+ L+ +
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVV 108
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 682 NKVGEGGFGSVYKGI-LSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGC 740
K+G+G G+VY + ++ G +A++Q++ + + +NEI ++ ++PN+V
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 741 CVEGNQLLLVYEYMKNNCLSRAI 763
+ G++L +V EY+ L+ +
Sbjct: 87 YLVGDELWVVMEYLAGGSLTDVV 109
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 682 NKVGEGGFGSVYKGI-LSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGC 740
K+G+G G+VY + ++ G +A++Q++ + + +NEI ++ ++PN+V
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 741 CVEGNQLLLVYEYMKNNCLSRAI 763
+ G++L +V EY+ L+ +
Sbjct: 87 YLVGDELWVVMEYLAGGSLTDVV 109
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 683 KVGEGGFGSVYKGILSD-GTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCC 741
++G+G FG VYK + G + A K + +KS + +++ EI +++ HP +VKL G
Sbjct: 18 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 77
Query: 742 VEGNQLLLVYEY 753
+L ++ E+
Sbjct: 78 YHDGKLWIMIEF 89
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 682 NKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCC 741
++G G FG V+ G ++ T +AVK L + + F+ E ++ QH LV+LY
Sbjct: 19 KRLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVV 77
Query: 742 VEGNQLLLVYEYMKNNCL 759
+ ++ EYM L
Sbjct: 78 TREEPIYIITEYMAKGSL 95
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 684 VGEGGFGSVYKGILS----DGTVIAVKQLSSK-SRQGNREFVNEIGMISAQQHPNLVKLY 738
+G G FG V +G L + +A+K L + + REF++E ++ +HPN+++L
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 83
Query: 739 GCCVEGNQLLLVYEYMKNNCL 759
G ++++ E+M+N L
Sbjct: 84 GVVTNSMPVMILTEFMENGAL 104
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 684 VGEGGFGSVYKGILS----DGTVIAVKQLSSK-SRQGNREFVNEIGMISAQQHPNLVKLY 738
+G G FG V +G L + +A+K L + + REF++E ++ +HPN+++L
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 81
Query: 739 GCCVEGNQLLLVYEYMKNNCL 759
G ++++ E+M+N L
Sbjct: 82 GVVTNSMPVMILTEFMENGAL 102
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 681 ANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGC 740
++G G FG V+ G + T +AVK L S + F+ E ++ QH LV+LY
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAV 76
Query: 741 CVEGNQLLLVYEYMKNNCL 759
+ + ++ EYM+N L
Sbjct: 77 VTQ-EPIYIITEYMENGSL 94
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 681 ANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGC 740
++G G FG V+ G + T +AVK L S + F+ E ++ QH LV+LY
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAV 76
Query: 741 CVEGNQLLLVYEYMKNNCL 759
+ + ++ EYM+N L
Sbjct: 77 VTQ-EPIYIITEYMENGSL 94
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 681 ANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGC 740
++G G FG V+ G + T +AVK L S + F+ E ++ QH LV+LY
Sbjct: 19 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAV 77
Query: 741 CVEGNQLLLVYEYMKNNCL 759
+ + ++ EYM+N L
Sbjct: 78 VTQ-EPIYIITEYMENGSL 95
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 681 ANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGC 740
++G G FG V+ G + T +AVK L S + F+ E ++ QH LV+LY
Sbjct: 20 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAV 78
Query: 741 CVEGNQLLLVYEYMKNNCL 759
+ + ++ EYM+N L
Sbjct: 79 VTQ-EPIYIITEYMENGSL 96
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 681 ANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGC 740
++G G FG V+ G + T +AVK L S + F+ E ++ QH LV+LY
Sbjct: 23 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAV 81
Query: 741 CVEGNQLLLVYEYMKNNCL 759
+ + ++ EYM+N L
Sbjct: 82 VTQ-EPIYIITEYMENGSL 99
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 681 ANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGC 740
++G G FG V+ G + T +AVK L S + F+ E ++ QH LV+LY
Sbjct: 27 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAV 85
Query: 741 CVEGNQLLLVYEYMKNNCL 759
+ + ++ EYM+N L
Sbjct: 86 VTQ-EPIYIITEYMENGSL 103
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 681 ANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGC 740
++G G FG V+ G + T +AVK L S + F+ E ++ QH LV+LY
Sbjct: 24 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAV 82
Query: 741 CVEGNQLLLVYEYMKNNCL 759
+ + ++ EYM+N L
Sbjct: 83 VTQ-EPIYIITEYMENGSL 100
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 681 ANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGC 740
++G G FG V+ G + T +AVK L S + F+ E ++ QH LV+LY
Sbjct: 24 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAV 82
Query: 741 CVEGNQLLLVYEYMKNNCL 759
+ + ++ EYM+N L
Sbjct: 83 VTQ-EPIYIITEYMENGSL 100
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 681 ANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGC 740
++G G FG V+ G + T +AVK L S + F+ E ++ QH LV+LY
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAV 76
Query: 741 CVEGNQLLLVYEYMKNNCL 759
+ + ++ EYM+N L
Sbjct: 77 VTQ-EPIYIITEYMENGSL 94
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 681 ANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGC 740
++G G FG V+ G + T +AVK L S + F+ E ++ QH LV+LY
Sbjct: 28 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAV 86
Query: 741 CVEGNQLLLVYEYMKNNCL 759
+ + ++ EYM+N L
Sbjct: 87 VTQ-EPIYIITEYMENGSL 104
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 681 ANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGC 740
++G G FG V+ G + T +AVK L S + F+ E ++ QH LV+LY
Sbjct: 13 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAV 71
Query: 741 CVEGNQLLLVYEYMKNNCL 759
+ + ++ EYM+N L
Sbjct: 72 VTQ-EPIYIITEYMENGSL 89
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 682 NKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCC 741
++G G FG V+ G + T +AVK L S + F+ E ++ QH LV+LY
Sbjct: 27 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVV 85
Query: 742 VEGNQLLLVYEYMKNNCL 759
+ + ++ EYM+N L
Sbjct: 86 TQ-EPIYIITEYMENGSL 102
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 68/147 (46%), Gaps = 13/147 (8%)
Query: 659 LDLQTGLYTLRQIKAA----TNNFDPA------NKVGEGGFGSV-YKGILSDGTVIAVKQ 707
L Q+G+ T Q KAA + DP K+GEG G V G +AVK
Sbjct: 18 LYFQSGVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKM 77
Query: 708 LSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFGKL 767
+ + +Q NE+ ++ QH N+V++Y + G +L ++ E+++ L+ I ++
Sbjct: 78 MDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALT-DIVSQV 136
Query: 768 RIFHISIYATFPQGNIQILIISAANNI 794
R+ I AT + +Q L A +
Sbjct: 137 RLNEEQI-ATVCEAVLQALAYLHAQGV 162
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 684 VGEGGFGSVYKGILS----DGTVIAVKQLS-SKSRQGNREFVNEIGMISAQQHPNLVKLY 738
VG G FG V G L +A+K L + + R+F+ E ++ HPN+++L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 739 GCCVEGNQLLLVYEYMKNNCL 759
G + +++V EYM+N L
Sbjct: 113 GVVTKSKPVMIVTEYMENGSL 133
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 681 ANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGC 740
++G G FG V+ G + T +AVK L S + F+ E ++ QH LV+LY
Sbjct: 14 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAV 72
Query: 741 CVEGNQLLLVYEYMKNNCL 759
+ + ++ EYM+N L
Sbjct: 73 VTQ-EPIYIITEYMENGSL 90
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 684 VGEGGFGSVYKGILS----DGTVIAVKQLS-SKSRQGNREFVNEIGMISAQQHPNLVKLY 738
VG G FG V G L +A+K L + + R+F+ E ++ HPN+++L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 739 GCCVEGNQLLLVYEYMKNNCL 759
G + +++V EYM+N L
Sbjct: 113 GVVTKSKPVMIVTEYMENGSL 133
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 684 VGEGGFGSVYKGILS----DGTVIAVKQLS-SKSRQGNREFVNEIGMISAQQHPNLVKLY 738
VG G FG V G L +A+K L + + R+F+ E ++ HPN+++L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 739 GCCVEGNQLLLVYEYMKNNCL 759
G + +++V EYM+N L
Sbjct: 113 GVVTKSKPVMIVTEYMENGSL 133
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 684 VGEGGFGSVYKGILS----DGTVIAVKQLS-SKSRQGNREFVNEIGMISAQQHPNLVKLY 738
VG G FG V G L +A+K L + + R+F+ E ++ HPN+++L
Sbjct: 51 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 110
Query: 739 GCCVEGNQLLLVYEYMKNNCL 759
G + +++V EYM+N L
Sbjct: 111 GVVTKSKPVMIVTEYMENGSL 131
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 684 VGEGGFGSVYKGILS----DGTVIAVKQLS-SKSRQGNREFVNEIGMISAQQHPNLVKLY 738
VG G FG V G L +A+K L + + R+F+ E ++ HPN+++L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 739 GCCVEGNQLLLVYEYMKNNCL 759
G + +++V EYM+N L
Sbjct: 113 GVVTKSKPVMIVTEYMENGSL 133
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 684 VGEGGFGSVYKGILS----DGTVIAVKQLS-SKSRQGNREFVNEIGMISAQQHPNLVKLY 738
VG G FG V G L +A+K L + + R+F+ E ++ HPN+++L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 739 GCCVEGNQLLLVYEYMKNNCL 759
G + +++V EYM+N L
Sbjct: 113 GVVTKSKPVMIVTEYMENGSL 133
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 684 VGEGGFGSVYKGILS----DGTVIAVKQLS-SKSRQGNREFVNEIGMISAQQHPNLVKLY 738
VG G FG V G L +A+K L + + R+F+ E ++ HPN+++L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 739 GCCVEGNQLLLVYEYMKNNCL 759
G + +++V EYM+N L
Sbjct: 113 GVVTKSKPVMIVTEYMENGSL 133
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 684 VGEGGFGSVYKGILS----DGTVIAVKQLS-SKSRQGNREFVNEIGMISAQQHPNLVKLY 738
VG G FG V G L +A+K L + + R+F+ E ++ HPN+++L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 739 GCCVEGNQLLLVYEYMKNNCL 759
G + +++V EYM+N L
Sbjct: 113 GVVTKSKPVMIVTEYMENGSL 133
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 684 VGEGGFGSVYKGILS----DGTVIAVKQLS-SKSRQGNREFVNEIGMISAQQHPNLVKLY 738
VG G FG V G L +A+K L + + R+F+ E ++ HPN+++L
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 83
Query: 739 GCCVEGNQLLLVYEYMKNNCL 759
G + +++V EYM+N L
Sbjct: 84 GVVTKSKPVMIVTEYMENGSL 104
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 684 VGEGGFGSVYKGILS----DGTVIAVKQLS-SKSRQGNREFVNEIGMISAQQHPNLVKLY 738
VG G FG V G L +A+K L + + R+F+ E ++ HPN+++L
Sbjct: 41 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 100
Query: 739 GCCVEGNQLLLVYEYMKNNCL 759
G + +++V EYM+N L
Sbjct: 101 GVVTKSKPVMIVTEYMENGSL 121
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 682 NKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCC 741
K+G G FG V+ G ++ T +AVK L + + F+ E ++ QH LV+LY
Sbjct: 18 KKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVV 76
Query: 742 VEGNQLLLVYEYMKNNCL 759
+ + ++ E+M L
Sbjct: 77 TKEEPIYIITEFMAKGSL 94
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 682 NKVGEGGFGSVYKGILSDGTVIAVKQLS-SKSRQG-NREFVNEIGMISAQQHPNLVKLYG 739
K+GEG +G VYK + G A+K++ K +G + EI ++ +H N+VKLY
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 740 CCVEGNQLLLVYEYMKNN 757
+L+LV+E++ +
Sbjct: 68 VIHTKKRLVLVFEHLDQD 85
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 682 NKVGEGGFGSVYKGILSDGTVIAVKQLS-SKSRQG-NREFVNEIGMISAQQHPNLVKLYG 739
K+GEG +G VYK + G A+K++ K +G + EI ++ +H N+VKLY
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 740 CCVEGNQLLLVYEYMKNN 757
+L+LV+E++ +
Sbjct: 68 VIHTKKRLVLVFEHLDQD 85
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 683 KVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCV 742
K+G+G FG V+ G + T +A+K L + F+ E ++ +H LV+LY
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 743 EGNQLLLVYEYMKNNCLSRAIFGKL 767
E + +V EYM CL + G++
Sbjct: 84 E-EPIYIVMEYMSKGCLLDFLKGEM 107
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 682 NKVGEGGFGSVYKGILSDGTVIAVKQLS-SKSRQG-NREFVNEIGMISAQQHPNLVKLYG 739
K+GEG +G VYK + G A+K++ K +G + EI ++ +H N+VKLY
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 740 CCVEGNQLLLVYEYMKNN 757
+L+LV+E++ +
Sbjct: 68 VIHTKKRLVLVFEHLDQD 85
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 681 ANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSK-SRQGNREFVNEIGMISAQQHPNLVKLY 738
++G G FG V+ G L +D T++AVK +F+ E ++ HPN+V+L
Sbjct: 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLI 178
Query: 739 GCCVEGNQLLLVYEYMK 755
G C + + +V E ++
Sbjct: 179 GVCTQKQPIYIVMELVQ 195
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 4/87 (4%)
Query: 672 KAATNNFDPANK---VGEGGFGSVYK-GILSDGTVIAVKQLSSKSRQGNREFVNEIGMIS 727
+ A N+F +K +G G FG V+K + G +A K + ++ + E NEI +++
Sbjct: 82 QGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMN 141
Query: 728 AQQHPNLVKLYGCCVEGNQLLLVYEYM 754
H NL++LY N ++LV EY+
Sbjct: 142 QLDHANLIQLYDAFESKNDIVLVMEYV 168
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 681 ANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSK-SRQGNREFVNEIGMISAQQHPNLVKLY 738
++G G FG V+ G L +D T++AVK +F+ E ++ HPN+V+L
Sbjct: 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLI 178
Query: 739 GCCVEGNQLLLVYEYMK 755
G C + + +V E ++
Sbjct: 179 GVCTQKQPIYIVMELVQ 195
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 684 VGE-GGFGSVYKGILSDGTVIAV-KQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCC 741
+GE G FG VYK + +V+A K + +KS + +++ EI ++++ HPN+VKL
Sbjct: 17 IGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 76
Query: 742 VEGNQLLLVYEY 753
N L ++ E+
Sbjct: 77 YYENNLWILIEF 88
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 683 KVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCV 742
K+G+G FG V+ G + T +A+K L + F+ E ++ +H LV+LY
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 743 EGNQLLLVYEYMKNNCLSRAIFGKL 767
E + +V EYM CL + G++
Sbjct: 84 E-EPIYIVTEYMSKGCLLDFLKGEM 107
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Query: 684 VGEGGFGSVYKGILS----DGTVIAVKQLS-SKSRQGNREFVNEIGMISAQQHPNLVKLY 738
+G G FG V G L +A+K L + + R+F+ E ++ HPN+V L
Sbjct: 51 IGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLE 110
Query: 739 GCCVEGNQLLLVYEYMKNNCLS 760
G G +++V E+M+N L
Sbjct: 111 GVVTRGKPVMIVIEFMENGALD 132
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
Query: 669 RQIKAATNNFDPANKVGEGGFGSVYKGIL----SDGTVIAVKQLSSK-SRQGNREFVNEI 723
R+I+A+ + + +G G G V G L +A+K L + + + R+F++E
Sbjct: 44 REIEASRIHIE--KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEA 101
Query: 724 GMISAQQHPNLVKLYGCCVEGNQLLLVYEYMKNNCL 759
++ HPN+++L G G ++V EYM+N L
Sbjct: 102 SIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSL 137
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
Query: 669 RQIKAATNNFDPANKVGEGGFGSVYKGIL----SDGTVIAVKQLSSK-SRQGNREFVNEI 723
R+I+A+ + + +G G G V G L +A+K L + + + R+F++E
Sbjct: 44 REIEASRIHIE--KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEA 101
Query: 724 GMISAQQHPNLVKLYGCCVEGNQLLLVYEYMKNNCL 759
++ HPN+++L G G ++V EYM+N L
Sbjct: 102 SIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSL 137
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 9/93 (9%)
Query: 668 LRQIKAATNNFDPANKVGEGGFGSVYKGIL------SDGTVIAVKQLSSKSRQGNREFVN 721
L++I + F ++GE FG VYKG L +A+K L K+ RE
Sbjct: 20 LKEISLSAVRF--MEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFR 77
Query: 722 EIGMISAQ-QHPNLVKLYGCCVEGNQLLLVYEY 753
M+ A+ QHPN+V L G + L +++ Y
Sbjct: 78 HEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSY 110
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Query: 676 NNFDPANKVGEGGFGSVYKGILSD-GTVIAVKQL--SSKSRQGNREFVNEIGMISAQQHP 732
++ K+GEG +G V+K D G ++A+K+ S + + EI M+ +HP
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP 62
Query: 733 NLVKLYGCCVEGNQLLLVYEYMKNNCL 759
NLV L +L LV+EY + L
Sbjct: 63 NLVNLLEVFRRKRRLHLVFEYCDHTVL 89
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 9/93 (9%)
Query: 668 LRQIKAATNNFDPANKVGEGGFGSVYKGIL------SDGTVIAVKQLSSKSRQGNREFVN 721
L++I + F ++GE FG VYKG L +A+K L K+ RE
Sbjct: 3 LKEISLSAVRF--MEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFR 60
Query: 722 EIGMISAQ-QHPNLVKLYGCCVEGNQLLLVYEY 753
M+ A+ QHPN+V L G + L +++ Y
Sbjct: 61 HEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSY 93
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 684 VGEGGFGSVYKGILSD-GTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCV 742
+G+G FG K + G V+ +K+L + R F+ E+ ++ +HPN++K G
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77
Query: 743 EGNQLLLVYEYMKNNCL 759
+ +L + EY+K L
Sbjct: 78 KDKRLNFITEYIKGGTL 94
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 684 VGEGGFGSVYKGILS----DGTVIAVKQLSSK-SRQGNREFVNEIGMISAQQHPNLVKLY 738
+G G FG V G L +A+K L S + + R+F++E ++ HPN++ L
Sbjct: 41 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 100
Query: 739 GCCVEGNQLLLVYEYMKNNCL 759
G + ++++ E+M+N L
Sbjct: 101 GVVTKSTPVMIITEFMENGSL 121
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 676 NNFDPANKVGEGGFGSVYK------GILSDGTVIAVKQLSSKSRQGNREFVNEIGMISA- 728
N+ + +GEG FG V K G+ D + +K+ +SK +R+F E+ ++
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKD--DHRDFAGELEVLCKL 72
Query: 729 QQHPNLVKLYGCCVEGNQLLLVYEY 753
HPN++ L G C L L EY
Sbjct: 73 GHHPNIINLLGACEHRGYLYLAIEY 97
>pdb|3ZYJ|A Chain A, Netring1 In Complex With Ngl1
pdb|3ZYJ|C Chain C, Netring1 In Complex With Ngl1
Length = 440
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 81/165 (49%), Gaps = 12/165 (7%)
Query: 184 RKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPE--FIGKWKKIQKLH 241
+ L +L+ L LS N L NLN L + DN + IP F+ K+++L
Sbjct: 85 KHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLT-TIPNGAFV-YLSKLKELW 142
Query: 242 IQGSSLEGPIPASISALTSLTDLRISDLKG----SESAFPKLDKMNLKTLILTKCLIHGE 297
++ + +E + + + SL L + +LK SE AF L NL+ L L C + E
Sbjct: 143 LRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLS--NLRYLNLAMCNLR-E 199
Query: 298 IPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKL 342
IP+ + + KL +DLS N+L+ P +F+ L +++ +++
Sbjct: 200 IPN-LTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQI 243
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
Query: 676 NNFDPANKVGEGGFGSVYKGI-LSDGT----VIAVKQL-SSKSRQGNREFVNEIGMISAQ 729
F +G G FG+VYKG+ + +G +A+K+L + S + N+E ++E ++++
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEYMKNNCL 759
+P++ +L G C+ + L+ + M CL
Sbjct: 79 DNPHVCRLLGICLTST-VQLIMQLMPFGCL 107
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 674 ATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNRE--FVNEIGMISAQQ 730
+ + + K+GEG +G VYK I + +A+K++ + + + E+ ++ Q
Sbjct: 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQ 91
Query: 731 HPNLVKLYGCCVEGNQLLLVYEYMKNN 757
H N+++L ++L L++EY +N+
Sbjct: 92 HRNIIELKSVIHHNHRLHLIFEYAEND 118
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
Query: 676 NNFDPANKVGEGGFGSVYKGI-LSDGT----VIAVKQL-SSKSRQGNREFVNEIGMISAQ 729
F +G G FG+VYKG+ + +G +A+K+L + S + N+E ++E ++++
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEYMKNNCL 759
+P++ +L G C+ + L+ + M CL
Sbjct: 79 DNPHVCRLLGICLTST-VQLIMQLMPFGCL 107
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
Query: 676 NNFDPANKVGEGGFGSVYKGI-LSDGT----VIAVKQL-SSKSRQGNREFVNEIGMISAQ 729
F +G G FG+VYKG+ + +G +A+K+L + S + N+E ++E ++++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEYMKNNCL 759
+P++ +L G C+ + L+ + M CL
Sbjct: 78 DNPHVCRLLGICLTST-VQLIMQLMPFGCL 106
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 676 NNFDPANKVGEGGFGSVYK------GILSDGTVIAVKQLSSKSRQGNREFVNEIGMISA- 728
N+ + +GEG FG V K G+ D + +K+ +SK +R+F E+ ++
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKD--DHRDFAGELEVLCKL 82
Query: 729 QQHPNLVKLYGCCVEGNQLLLVYEY 753
HPN++ L G C L L EY
Sbjct: 83 GHHPNIINLLGACEHRGYLYLAIEY 107
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
Query: 676 NNFDPANKVGEGGFGSVYKGI-LSDGT----VIAVKQL-SSKSRQGNREFVNEIGMISAQ 729
F +G G FG+VYKG+ + +G +A+K+L + S + N+E ++E ++++
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEYMKNNCL 759
+P++ +L G C+ + L+ + M CL
Sbjct: 76 DNPHVCRLLGICLTST-VQLIMQLMPFGCL 104
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
Query: 676 NNFDPANKVGEGGFGSVYKGI-LSDGT----VIAVKQL-SSKSRQGNREFVNEIGMISAQ 729
F +G G FG+VYKG+ + +G +A+K+L + S + N+E ++E ++++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEYMKNNCL 759
+P++ +L G C+ + L+ + M CL
Sbjct: 75 DNPHVCRLLGICLTST-VQLIMQLMPFGCL 103
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 684 VGEGGFGSVYKGILS----DGTVIAVKQLSSK-SRQGNREFVNEIGMISAQQHPNLVKLY 738
+G G FG V G L +A+K L S + + R+F++E ++ HPN++ L
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 74
Query: 739 GCCVEGNQLLLVYEYMKNNCL 759
G + ++++ E+M+N L
Sbjct: 75 GVVTKSTPVMIITEFMENGSL 95
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 51/93 (54%), Gaps = 6/93 (6%)
Query: 671 IKAATNNFDPANKVGEGGFGSVYKGILSD-GTVIAVKQLS----SKSRQG-NREFVNEIG 724
+K+ ++ + +GEG F +VYK + ++A+K++ S+++ G NR + EI
Sbjct: 5 VKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIK 64
Query: 725 MISAQQHPNLVKLYGCCVEGNQLLLVYEYMKNN 757
++ HPN++ L + + LV+++M+ +
Sbjct: 65 LLQELSHPNIIGLLDAFGHKSNISLVFDFMETD 97
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 676 NNFDPANKVGEGGFGSVYK------GILSDGTVIAVKQLSSKSRQGNREFVNEIGMISA- 728
N+ + +GEG FG V K G+ D + +K+ +SK +R+F E+ ++
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKD--DHRDFAGELEVLCKL 79
Query: 729 QQHPNLVKLYGCCVEGNQLLLVYEY 753
HPN++ L G C L L EY
Sbjct: 80 GHHPNIINLLGACEHRGYLYLAIEY 104
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
Query: 676 NNFDPANKVGEGGFGSVYKGI-LSDGT----VIAVKQL-SSKSRQGNREFVNEIGMISAQ 729
F +G G FG+VYKG+ + +G +A+K+L + S + N+E ++E ++++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEYMKNNCL 759
+P++ +L G C+ + L+ + M CL
Sbjct: 77 DNPHVCRLLGICLTST-VQLIMQLMPFGCL 105
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
Query: 676 NNFDPANKVGEGGFGSVYKGI-LSDGT----VIAVKQL-SSKSRQGNREFVNEIGMISAQ 729
F +G G FG+VYKG+ + +G +A+K+L + S + N+E ++E ++++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEYMKNNCL 759
+P++ +L G C+ + L+ + M CL
Sbjct: 77 DNPHVCRLLGICLTST-VQLIMQLMPFGCL 105
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
Query: 676 NNFDPANKVGEGGFGSVYKGI-LSDGT----VIAVKQL-SSKSRQGNREFVNEIGMISAQ 729
F +G G FG+VYKG+ + +G +A+K+L + S + N+E ++E ++++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEYMKNNCL 759
+P++ +L G C+ + L+ + M CL
Sbjct: 77 DNPHVCRLLGICLTST-VQLIMQLMPFGCL 105
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
Query: 676 NNFDPANKVGEGGFGSVYKGI-LSDG----TVIAVKQL-SSKSRQGNREFVNEIGMISAQ 729
F +G G FG+VYKG+ + +G +A+K+L + S + N+E ++E ++++
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 68
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEYMKNNCL 759
+P++ +L G C+ + L+ + M CL
Sbjct: 69 DNPHVCRLLGICLTST-VQLITQLMPFGCL 97
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
Query: 676 NNFDPANKVGEGGFGSVYKGI-LSDGT----VIAVKQL-SSKSRQGNREFVNEIGMISAQ 729
F +G G FG+VYKG+ + +G +A+K+L + S + N+E ++E ++++
Sbjct: 25 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 84
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEYMKNNCL 759
+P++ +L G C+ + L+ + M CL
Sbjct: 85 DNPHVCRLLGICLTST-VQLITQLMPFGCL 113
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
Query: 676 NNFDPANKVGEGGFGSVYKGI-LSDGT----VIAVKQL-SSKSRQGNREFVNEIGMISAQ 729
F +G G FG+VYKG+ + +G +A+K+L + S + N+E ++E ++++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEYMKNNCL 759
+P++ +L G C+ + L+ + M CL
Sbjct: 78 DNPHVCRLLGICLTST-VQLITQLMPFGCL 106
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
Query: 676 NNFDPANKVGEGGFGSVYKGI-LSDG----TVIAVKQL-SSKSRQGNREFVNEIGMISAQ 729
F +G G FG+VYKG+ + +G +A+K+L + S + N+E ++E ++++
Sbjct: 12 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 71
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEYMKNNCL 759
+P++ +L G C+ + L+ + M CL
Sbjct: 72 DNPHVCRLLGICLTST-VQLITQLMPFGCL 100
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
Query: 676 NNFDPANKVGEGGFGSVYKGI-LSDGT----VIAVKQL-SSKSRQGNREFVNEIGMISAQ 729
F +G G FG+VYKG+ + +G +A+K+L + S + N+E ++E ++++
Sbjct: 21 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 80
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEYMKNNCL 759
+P++ +L G C+ + L+ + M CL
Sbjct: 81 DNPHVCRLLGICLTST-VQLITQLMPFGCL 109
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
Query: 676 NNFDPANKVGEGGFGSVYKGI-LSDGT----VIAVKQL-SSKSRQGNREFVNEIGMISAQ 729
F +G G FG+VYKG+ + +G +A+K+L + S + N+E ++E ++++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEYMKNNCL 759
+P++ +L G C+ + L+ + M CL
Sbjct: 75 DNPHVCRLLGICLTST-VQLITQLMPFGCL 103
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
Query: 676 NNFDPANKVGEGGFGSVYKGI-LSDG----TVIAVKQL-SSKSRQGNREFVNEIGMISAQ 729
F +G G FG+VYKG+ + +G +A+K+L + S + N+E ++E ++++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEYMKNNCL 759
+P++ +L G C+ + L+ + M CL
Sbjct: 75 DNPHVCRLLGICLTST-VQLITQLMPFGCL 103
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
Query: 676 NNFDPANKVGEGGFGSVYKGI-LSDGT----VIAVKQL-SSKSRQGNREFVNEIGMISAQ 729
F +G G FG+VYKG+ + +G +A+K+L + S + N+E ++E ++++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEYMKNNCL 759
+P++ +L G C+ + L+ + M CL
Sbjct: 78 DNPHVCRLLGICLTST-VQLITQLMPFGCL 106
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
Query: 676 NNFDPANKVGEGGFGSVYKGI-LSDGT----VIAVKQL-SSKSRQGNREFVNEIGMISAQ 729
F +G G FG+VYKG+ + +G +A+K+L + S + N+E ++E ++++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEYMKNNCL 759
+P++ +L G C+ + L+ + M CL
Sbjct: 78 DNPHVCRLLGICLTST-VQLITQLMPFGCL 106
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
Query: 676 NNFDPANKVGEGGFGSVYKGI-LSDGT----VIAVKQL-SSKSRQGNREFVNEIGMISAQ 729
F +G G FG+VYKG+ + +G +A+K+L + S + N+E ++E ++++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEYMKNNCL 759
+P++ +L G C+ + L+ + M CL
Sbjct: 75 DNPHVCRLLGICLTST-VQLITQLMPFGCL 103
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
Query: 676 NNFDPANKVGEGGFGSVYKGI-LSDGT----VIAVKQL-SSKSRQGNREFVNEIGMISAQ 729
F +G G FG+VYKG+ + +G +A+K+L + S + N+E ++E ++++
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEYMKNNCL 759
+P++ +L G C+ + L+ + M CL
Sbjct: 82 DNPHVCRLLGICLTST-VQLITQLMPFGCL 110
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
Query: 676 NNFDPANKVGEGGFGSVYKGI-LSDGT----VIAVKQL-SSKSRQGNREFVNEIGMISAQ 729
F +G G FG+VYKG+ + +G +A+K+L + S + N+E ++E ++++
Sbjct: 40 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 99
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEYMKNNCL 759
+P++ +L G C+ + L+ + M CL
Sbjct: 100 DNPHVCRLLGICLTST-VQLITQLMPFGCL 128
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
Query: 676 NNFDPANKVGEGGFGSVYKGI-LSDGT----VIAVKQL-SSKSRQGNREFVNEIGMISAQ 729
F +G G FG+VYKG+ + +G +A+K+L + S + N+E ++E ++++
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEYMKNNCL 759
+P++ +L G C+ + L+ + M CL
Sbjct: 82 DNPHVCRLLGICLTST-VQLITQLMPFGCL 110
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
Query: 676 NNFDPANKVGEGGFGSVYKGI-LSDGT----VIAVKQL-SSKSRQGNREFVNEIGMISAQ 729
F +G G FG+VYKG+ + +G +A+K+L + S + N+E ++E ++++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEYMKNNCL 759
+P++ +L G C+ + L+ + M CL
Sbjct: 77 DNPHVCRLLGICLTST-VQLITQLMPFGCL 105
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
Query: 676 NNFDPANKVGEGGFGSVYKGI-LSDGT----VIAVKQL-SSKSRQGNREFVNEIGMISAQ 729
F +G G FG+VYKG+ + +G +A+K+L + S + N+E ++E ++++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEYMKNNCL 759
+P++ +L G C+ + L+ + M CL
Sbjct: 77 DNPHVCRLLGICLTST-VQLITQLMPFGCL 105
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 676 NNFDPANKVGEGGFGSVYKGI-LSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNL 734
+++D ++G G FG V++ + G A K + + EI +S +HP L
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 110
Query: 735 VKLYGCCVEGNQLLLVYEYM 754
V L+ + N+++++YE+M
Sbjct: 111 VNLHDAFEDDNEMVMIYEFM 130
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
Query: 661 LQTGLYTLRQIKAATNN-FDPANKVGEGGFGSVYKGILS-DGTVIAVKQLS-SKSRQGNR 717
+Q+GL ++ +KA F K+G+G FG V+KGI + V+A+K + ++
Sbjct: 6 VQSGLPGMQNLKADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIE 65
Query: 718 EFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYM 754
+ EI ++S P + K YG ++ +L ++ EY+
Sbjct: 66 DIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL 102
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 682 NKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCC 741
++G G G V+ G + T +AVK L S + F+ E ++ QH LV+LY
Sbjct: 19 ERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVV 77
Query: 742 VEGNQLLLVYEYMKNNCL 759
+ + ++ EYM+N L
Sbjct: 78 TQ-EPIYIITEYMENGSL 94
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 684 VGEGGFGSVYKGILS----DGTVIAVKQLS-SKSRQGNREFVNEIGMISAQQHPNLVKLY 738
VG G FG V G L +A+K L + + R+F+ E ++ HPN+++L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 739 GCCVEGNQLLLVYEYMKNNCL 759
G + +++V E M+N L
Sbjct: 113 GVVTKSKPVMIVTEXMENGSL 133
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 684 VGEGGFGSVYKGILS----DGTVIAVKQLS-SKSRQGNREFVNEIGMISAQQHPNLVKLY 738
+G G FG V G L +A+K L + + R+F+ E ++ HPN++ L
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLE 89
Query: 739 GCCVEGNQLLLVYEYMKNNCL 759
G + +++V EYM+N L
Sbjct: 90 GVVTKSKPVMIVTEYMENGSL 110
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 676 NNFDPANKVGEGGFGSVYKGI-LSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNL 734
+++D ++G G FG V++ + G A K + + EI +S +HP L
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 216
Query: 735 VKLYGCCVEGNQLLLVYEYM 754
V L+ + N+++++YE+M
Sbjct: 217 VNLHDAFEDDNEMVMIYEFM 236
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 684 VGEGGFGSVYKGILS----DGTVIAVKQLS-SKSRQGNREFVNEIGMISAQQHPNLVKLY 738
VG G FG V G L +A+K L + + R+F+ E ++ HPN+++L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 739 GCCVEGNQLLLVYEYMKNNCL 759
G + +++V E M+N L
Sbjct: 113 GVVTKSKPVMIVTEXMENGSL 133
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 684 VGEGGFGSVYKGILS----DGTVIAVKQLS-SKSRQGNREFVNEIGMISAQQHPNLVKLY 738
VG G FG V G L +A+K L + + R+F+ E ++ HPN+++L
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 83
Query: 739 GCCVEGNQLLLVYEYMKNNCL 759
G + +++V E M+N L
Sbjct: 84 GVVTKSKPVMIVTEXMENGSL 104
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 684 VGEGGFGSVYKGILS----DGTVIAVKQLSSK-SRQGNREFVNEIGMISAQQHPNLVKLY 738
+G G FG V G L +A+K L + + + R+F++E ++ HPN++ L
Sbjct: 37 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 96
Query: 739 GCCVEGNQLLLVYEYMKNNCL 759
G + ++++ EYM+N L
Sbjct: 97 GVVTKCKPVMIITEYMENGSL 117
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 45/79 (56%), Gaps = 4/79 (5%)
Query: 682 NKVGEGGFGSVYKGI--LSDGTVIAVKQLSSKSRQGNR-EFVNEIGMISAQQHPNLVKLY 738
+K+GEG + +VYKG L+D ++A+K++ + +G + E+ ++ +H N+V L+
Sbjct: 8 DKLGEGTYATVYKGKSKLTDN-LVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLH 66
Query: 739 GCCVEGNQLLLVYEYMKNN 757
L LV+EY+ +
Sbjct: 67 DIIHTEKSLTLVFEYLDKD 85
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 4/104 (3%)
Query: 671 IKAATNNFDPANKVGEGGFGSVYKG-ILSDGTVIAVKQLSSKS--RQGNREFV-NEIGMI 726
I +F N +G+G F VY+ + G +A+K + K+ + G + V NE+ +
Sbjct: 6 IGEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIH 65
Query: 727 SAQQHPNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFGKLRIF 770
+HP++++LY + N + LV E N ++R + +++ F
Sbjct: 66 CQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPF 109
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 683 KVGEGGFGSVYKGILSD-GTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCC 741
K+GEG G V G +AVK++ + +Q NE+ ++ H N+V +Y
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSY 111
Query: 742 VEGNQLLLVYEYMKNNCLS 760
+ G++L +V E+++ L+
Sbjct: 112 LVGDELWVVMEFLEGGALT 130
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 684 VGEGGFGSVYKGILS----DGTVIAVKQLSSK-SRQGNREFVNEIGMISAQQHPNLVKLY 738
+G G FG V G L +A+K L + + + R+F++E ++ HPN++ L
Sbjct: 16 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 75
Query: 739 GCCVEGNQLLLVYEYMKNNCL 759
G + ++++ EYM+N L
Sbjct: 76 GVVTKCKPVMIITEYMENGSL 96
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 9/111 (8%)
Query: 651 SADKELRGLDLQTGLYTLRQIKAATNNFDPANKVGEGGFGSVYK----GILSDGTVI--A 704
S+D E +D + Y L+ + N + +G G FG V GI G I A
Sbjct: 21 SSDNEYFYVDFREYEYDLKW-EFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVA 79
Query: 705 VKQLSSKSRQGNRE-FVNEIGMISA-QQHPNLVKLYGCCVEGNQLLLVYEY 753
VK L K+ RE ++E+ M++ H N+V L G C + L++EY
Sbjct: 80 VKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEY 130
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 676 NNFDPANKVGEGGFGSVYK----GILSDGTV--IAVKQLSSKSRQGNRE-FVNEIGMISA 728
NN +G G FG V + G+ + V +AVK L S + +E ++E+ ++S
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 729 -QQHPNLVKLYGCCVEGNQLLLVYEY 753
QH N+V L G C G +L++ EY
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEY 131
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 676 NNFDPANKVGEGGFGSVYK----GILSDGTV--IAVKQLSSKSRQGNRE-FVNEIGMISA 728
NN +G G FG V + G+ + V +AVK L S + +E ++E+ ++S
Sbjct: 31 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 90
Query: 729 -QQHPNLVKLYGCCVEGNQLLLVYEY 753
QH N+V L G C G +L++ EY
Sbjct: 91 LGQHENIVNLLGACTHGGPVLVITEY 116
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 684 VGEGGFGSVYKGILS----DGTVIAVKQLSSK-SRQGNREFVNEIGMISAQQHPNLVKLY 738
+G G FG V G L +A+K L + + + R+F++E ++ HPN++ L
Sbjct: 22 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 81
Query: 739 GCCVEGNQLLLVYEYMKNNCL 759
G + ++++ EYM+N L
Sbjct: 82 GVVTKCKPVMIITEYMENGSL 102
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 676 NNFDPANKVGEGGFGSVYK----GILSDGTV--IAVKQLSSKSRQGNRE-FVNEIGMISA 728
NN +G G FG V + G+ + V +AVK L S + +E ++E+ ++S
Sbjct: 38 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 97
Query: 729 -QQHPNLVKLYGCCVEGNQLLLVYEY 753
QH N+V L G C G +L++ EY
Sbjct: 98 LGQHENIVNLLGACTHGGPVLVITEY 123
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 676 NNFDPANKVGEGGFGSVYK----GILSDGTV--IAVKQLSSKSRQGNRE-FVNEIGMISA 728
NN +G G FG V + G+ + V +AVK L S + +E ++E+ ++S
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 729 -QQHPNLVKLYGCCVEGNQLLLVYEY 753
QH N+V L G C G +L++ EY
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEY 131
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 676 NNFDPANKVGEGGFGSVYK----GILSDGTV--IAVKQLSSKSRQGNRE-FVNEIGMISA 728
NN +G G FG V + G+ + V +AVK L S + +E ++E+ ++S
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 729 -QQHPNLVKLYGCCVEGNQLLLVYEY 753
QH N+V L G C G +L++ EY
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEY 131
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 8/87 (9%)
Query: 684 VGEGGFGSVYKGIL--SDGTVI--AVKQLSSKSRQGN-REFVNEIGMISAQQHPNLVKLY 738
+G G FG VY G L +DG I AVK L+ + G +F+ E ++ HPN++ L
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 116
Query: 739 GCCV--EGNQLLLVYEYMKNNCLSRAI 763
G C+ EG+ L+V YMK+ L I
Sbjct: 117 GICLRSEGSP-LVVLPYMKHGDLRNFI 142
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 8/87 (9%)
Query: 684 VGEGGFGSVYKGIL--SDGTVI--AVKQLSSKSRQGN-REFVNEIGMISAQQHPNLVKLY 738
+G G FG VY G L +DG I AVK L+ + G +F+ E ++ HPN++ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 739 GCCV--EGNQLLLVYEYMKNNCLSRAI 763
G C+ EG+ L+V YMK+ L I
Sbjct: 98 GICLRSEGSP-LVVLPYMKHGDLRNFI 123
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 8/87 (9%)
Query: 684 VGEGGFGSVYKGIL--SDGTVI--AVKQLSSKSRQGN-REFVNEIGMISAQQHPNLVKLY 738
+G G FG VY G L +DG I AVK L+ + G +F+ E ++ HPN++ L
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 739 GCCV--EGNQLLLVYEYMKNNCLSRAI 763
G C+ EG+ L+V YMK+ L I
Sbjct: 96 GICLRSEGSP-LVVLPYMKHGDLRNFI 121
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 8/87 (9%)
Query: 684 VGEGGFGSVYKGIL--SDGTVI--AVKQLSSKSRQGN-REFVNEIGMISAQQHPNLVKLY 738
+G G FG VY G L +DG I AVK L+ + G +F+ E ++ HPN++ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 739 GCCV--EGNQLLLVYEYMKNNCLSRAI 763
G C+ EG+ L+V YMK+ L I
Sbjct: 98 GICLRSEGSP-LVVLPYMKHGDLRNFI 123
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 8/87 (9%)
Query: 684 VGEGGFGSVYKGIL--SDGTVI--AVKQLSSKSRQGN-REFVNEIGMISAQQHPNLVKLY 738
+G G FG VY G L +DG I AVK L+ + G +F+ E ++ HPN++ L
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 115
Query: 739 GCCV--EGNQLLLVYEYMKNNCLSRAI 763
G C+ EG+ L+V YMK+ L I
Sbjct: 116 GICLRSEGSP-LVVLPYMKHGDLRNFI 141
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 8/87 (9%)
Query: 684 VGEGGFGSVYKGIL--SDGTVI--AVKQLSSKSRQGN-REFVNEIGMISAQQHPNLVKLY 738
+G G FG VY G L +DG I AVK L+ + G +F+ E ++ HPN++ L
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 102
Query: 739 GCCV--EGNQLLLVYEYMKNNCLSRAI 763
G C+ EG+ L+V YMK+ L I
Sbjct: 103 GICLRSEGSP-LVVLPYMKHGDLRNFI 128
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 8/87 (9%)
Query: 684 VGEGGFGSVYKGIL--SDGTVI--AVKQLSSKSRQGN-REFVNEIGMISAQQHPNLVKLY 738
+G G FG VY G L +DG I AVK L+ + G +F+ E ++ HPN++ L
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 739 GCCV--EGNQLLLVYEYMKNNCLSRAI 763
G C+ EG+ L+V YMK+ L I
Sbjct: 99 GICLRSEGSP-LVVLPYMKHGDLRNFI 124
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 8/87 (9%)
Query: 684 VGEGGFGSVYKGIL--SDGTVI--AVKQLSSKSRQGN-REFVNEIGMISAQQHPNLVKLY 738
+G G FG VY G L +DG I AVK L+ + G +F+ E ++ HPN++ L
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 739 GCCV--EGNQLLLVYEYMKNNCLSRAI 763
G C+ EG+ L+V YMK+ L I
Sbjct: 97 GICLRSEGSP-LVVLPYMKHGDLRNFI 122
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 8/87 (9%)
Query: 684 VGEGGFGSVYKGIL--SDGTVI--AVKQLSSKSRQGN-REFVNEIGMISAQQHPNLVKLY 738
+G G FG VY G L +DG I AVK L+ + G +F+ E ++ HPN++ L
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 89
Query: 739 GCCV--EGNQLLLVYEYMKNNCLSRAI 763
G C+ EG+ L+V YMK+ L I
Sbjct: 90 GICLRSEGSP-LVVLPYMKHGDLRNFI 115
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 8/87 (9%)
Query: 684 VGEGGFGSVYKGIL--SDGTVI--AVKQLSSKSRQGN-REFVNEIGMISAQQHPNLVKLY 738
+G G FG VY G L +DG I AVK L+ + G +F+ E ++ HPN++ L
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 156
Query: 739 GCCV--EGNQLLLVYEYMKNNCLSRAI 763
G C+ EG+ L+V YMK+ L I
Sbjct: 157 GICLRSEGSP-LVVLPYMKHGDLRNFI 182
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 8/87 (9%)
Query: 684 VGEGGFGSVYKGIL--SDGTVI--AVKQLSSKSRQGN-REFVNEIGMISAQQHPNLVKLY 738
+G G FG VY G L +DG I AVK L+ + G +F+ E ++ HPN++ L
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 739 GCCV--EGNQLLLVYEYMKNNCLSRAI 763
G C+ EG+ L+V YMK+ L I
Sbjct: 99 GICLRSEGSP-LVVLPYMKHGDLRNFI 124
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 8/87 (9%)
Query: 684 VGEGGFGSVYKGIL--SDGTVI--AVKQLSSKSRQGN-REFVNEIGMISAQQHPNLVKLY 738
+G G FG VY G L +DG I AVK L+ + G +F+ E ++ HPN++ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 739 GCCV--EGNQLLLVYEYMKNNCLSRAI 763
G C+ EG+ L+V YMK+ L I
Sbjct: 98 GICLRSEGSP-LVVLPYMKHGDLRNFI 123
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 681 ANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGC 740
++G G FG+VYKG + + +++ + Q + F NE+G++ +H N++ G
Sbjct: 18 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 741 CVEGNQLLLVYEYMKNNCL 759
+ QL +V ++ + + L
Sbjct: 78 STK-PQLAIVTQWCEGSSL 95
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 8/87 (9%)
Query: 684 VGEGGFGSVYKGIL--SDGTVI--AVKQLSSKSRQGN-REFVNEIGMISAQQHPNLVKLY 738
+G G FG VY G L +DG I AVK L+ + G +F+ E ++ HPN++ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 739 GCCV--EGNQLLLVYEYMKNNCLSRAI 763
G C+ EG+ L+V YMK+ L I
Sbjct: 98 GICLRSEGSP-LVVLPYMKHGDLRNFI 123
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 8/87 (9%)
Query: 684 VGEGGFGSVYKGIL--SDGTVI--AVKQLSSKSRQGN-REFVNEIGMISAQQHPNLVKLY 738
+G G FG VY G L +DG I AVK L+ + G +F+ E ++ HPN++ L
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 92
Query: 739 GCCV--EGNQLLLVYEYMKNNCLSRAI 763
G C+ EG+ L+V YMK+ L I
Sbjct: 93 GICLRSEGSP-LVVLPYMKHGDLRNFI 118
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 681 ANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGC 740
++G G FG+VYKG + + +++ + Q + F NE+G++ +H N++ G
Sbjct: 13 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 741 CVEGNQLLLVYEYMKNNCL 759
+ QL +V ++ + + L
Sbjct: 73 STK-PQLAIVTQWCEGSSL 90
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 8/87 (9%)
Query: 684 VGEGGFGSVYKGIL--SDGTVI--AVKQLSSKSRQGN-REFVNEIGMISAQQHPNLVKLY 738
+G G FG VY G L +DG I AVK L+ + G +F+ E ++ HPN++ L
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 94
Query: 739 GCCV--EGNQLLLVYEYMKNNCLSRAI 763
G C+ EG+ L+V YMK+ L I
Sbjct: 95 GICLRSEGSP-LVVLPYMKHGDLRNFI 120
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 8/87 (9%)
Query: 684 VGEGGFGSVYKGIL--SDGTVI--AVKQLSSKSRQGN-REFVNEIGMISAQQHPNLVKLY 738
+G G FG VY G L +DG I AVK L+ + G +F+ E ++ HPN++ L
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 739 GCCV--EGNQLLLVYEYMKNNCLSRAI 763
G C+ EG+ L+V YMK+ L I
Sbjct: 96 GICLRSEGSP-LVVLPYMKHGDLRNFI 121
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 676 NNFDPANKVGEGGFGSVYK----GILSDGTV--IAVKQLSSKSRQGNRE-FVNEIGMISA 728
NN +G G FG V + G+ + V +AVK L S + +E ++E+ ++S
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 729 -QQHPNLVKLYGCCVEGNQLLLVYEY 753
QH N+V L G C G +L++ EY
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEY 131
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 681 ANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGC 740
++G G FG+VYKG + + +++ + Q + F NE+G++ +H N++ G
Sbjct: 18 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 741 CVEGNQLLLVYEYMKNNCL 759
+ QL +V ++ + + L
Sbjct: 78 STK-PQLAIVTQWCEGSSL 95
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 8/87 (9%)
Query: 684 VGEGGFGSVYKGIL--SDGTVI--AVKQLSSKSRQGN-REFVNEIGMISAQQHPNLVKLY 738
+G G FG VY G L +DG I AVK L+ + G +F+ E ++ HPN++ L
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 739 GCCV--EGNQLLLVYEYMKNNCLSRAI 763
G C+ EG+ L+V YMK+ L I
Sbjct: 97 GICLRSEGSP-LVVLPYMKHGDLRNFI 122
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 681 ANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGC 740
++G G FG+VYKG + + +++ + Q + F NE+G++ +H N++ G
Sbjct: 15 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 74
Query: 741 CVEGNQLLLVYEYMKNNCL 759
+ QL +V ++ + + L
Sbjct: 75 STK-PQLAIVTQWCEGSSL 92
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 681 ANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGC 740
++G G FG+VYKG + + +++ + Q + F NE+G++ +H N++ G
Sbjct: 13 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 741 CVEGNQLLLVYEYMKNNCL 759
+ QL +V ++ + + L
Sbjct: 73 STK-PQLAIVTQWCEGSSL 90
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 681 ANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGC 740
++G G FG+VYKG + + +++ + Q + F NE+G++ +H N++ G
Sbjct: 33 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 92
Query: 741 CVEGNQLLLVYEYMKNNCL 759
+ QL +V ++ + + L
Sbjct: 93 STK-PQLAIVTQWCEGSSL 110
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 681 ANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGC 740
++G G FG+VYKG + + +++ + Q + F NE+G++ +H N++ G
Sbjct: 13 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 741 CVEGNQLLLVYEYMKNNCL 759
QL +V ++ + + L
Sbjct: 73 ST-APQLAIVTQWCEGSSL 90
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 681 ANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGC 740
++G G FG+VYKG + + +++ + Q + F NE+G++ +H N++ G
Sbjct: 40 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 99
Query: 741 CVEGNQLLLVYEYMKNNCL 759
+ QL +V ++ + + L
Sbjct: 100 STK-PQLAIVTQWCEGSSL 117
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 683 KVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCV 742
K+G+G FG V+ G + T +A+K L + F+ E ++ +H LV+LY
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 743 EGNQLLLVYEYMKNNCLSRAIFGKL 767
E + +V EYM L + G++
Sbjct: 84 E-EPIYIVIEYMSKGSLLDFLKGEM 107
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 682 NKVGEGGFGSV---YKGILSD--GTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVK 736
+++G+G FGSV L D G ++AVKQL R+F EI ++ A +VK
Sbjct: 16 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 75
Query: 737 LYGCCV-EGNQ-LLLVYEYMKNNCL 759
G G Q L LV EY+ + CL
Sbjct: 76 YRGVSYGPGRQSLRLVMEYLPSGCL 100
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 683 KVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCV 742
K+G+G FG V+ G + T +A+K L + F+ E ++ +H LV+LY
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 743 EGNQLLLVYEYMKNNCLSRAIFGKL 767
E + +V EYM L + G++
Sbjct: 84 E-EPIYIVIEYMSKGSLLDFLKGEM 107
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 7/97 (7%)
Query: 665 LYTLRQIKAATNNFDPANKVGEGGFGSVY----KGILSD--GTVIAVKQLSSKSRQGNR- 717
+Y + + A + ++G+G FG VY KG++ D T +A+K ++ + R
Sbjct: 8 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 67
Query: 718 EFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYM 754
EF+NE ++ ++V+L G +G L++ E M
Sbjct: 68 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELM 104
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 7/82 (8%)
Query: 684 VGEGGFGSVYKGI-LSDGT----VIAVKQL-SSKSRQGNREFVNEIGMISAQQHPNLVKL 737
+G G FG+VYKGI + DG +A+K L + S + N+E ++E +++ P + +L
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRL 84
Query: 738 YGCCVEGNQLLLVYEYMKNNCL 759
G C+ + LV + M CL
Sbjct: 85 LGICLTST-VQLVTQLMPYGCL 105
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 7/97 (7%)
Query: 665 LYTLRQIKAATNNFDPANKVGEGGFGSVY----KGILSD--GTVIAVKQLSSKSRQGNR- 717
+Y + + A + ++G+G FG VY KG++ D T +A+K ++ + R
Sbjct: 14 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 73
Query: 718 EFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYM 754
EF+NE ++ ++V+L G +G L++ E M
Sbjct: 74 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELM 110
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 676 NNFDPANKVGEGGFGSVYKGI-LSDG----TVIAVKQL-SSKSRQGNREFVNEIGMISAQ 729
F +G G FG+VYKG+ + +G +A+ +L + S + N+E ++E ++++
Sbjct: 49 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASV 108
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEYMKNNCL 759
+P++ +L G C+ + L+ + M CL
Sbjct: 109 DNPHVCRLLGICLTST-VQLITQLMPFGCL 137
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 681 ANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGC 740
++G G FG+VYKG + + +++ + Q + F NE+G++ +H N++ G
Sbjct: 41 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 741 CVEGNQLLLVYEYMKNNCL 759
+ QL +V ++ + + L
Sbjct: 101 STK-PQLAIVTQWCEGSSL 118
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 681 ANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGC 740
++G G FG+VYKG + + +++ + Q + F NE+G++ +H N++ G
Sbjct: 41 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 741 CVEGNQLLLVYEYMKNNCL 759
+ QL +V ++ + + L
Sbjct: 101 STK-PQLAIVTQWCEGSSL 118
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 683 KVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCV 742
K+G+G FG V+ G + T +A+K L + F+ E ++ +H LV+LY
Sbjct: 14 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 72
Query: 743 EGNQLLLVYEYMKNNCLSRAIFGKL 767
E + +V EYM L + G++
Sbjct: 73 E-EPIYIVTEYMSKGSLLDFLKGEM 96
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 683 KVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCV 742
K+G+G FG V+ G + T +A+K L + F+ E ++ +H LV+LY
Sbjct: 16 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 74
Query: 743 EGNQLLLVYEYMKNNCLSRAIFGKL 767
E + +V EYM L + G++
Sbjct: 75 E-EPIYIVTEYMSKGSLLDFLKGEM 98
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Query: 676 NNFDPANKVGEGGFGSVYKGI-LSDGT----VIAVKQL-SSKSRQGNREFVNEIGMISAQ 729
F +G G FG+VYKG+ + +G +A+K+L + S + N+E ++E ++++
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 730 QHPNLVKLYGCCVEGNQLLLV 750
+P++ +L G C+ L++
Sbjct: 76 DNPHVCRLLGICLTSTVQLIM 96
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 676 NNFDPANKVGEGGFGSVYKGI-LSDGT----VIAVKQL-SSKSRQGNREFVNEIGMISAQ 729
F + G FG+VYKG+ + +G +A+K+L + S + N+E ++E ++++
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEYMKNNCL 759
+P++ +L G C+ + L+ + M CL
Sbjct: 82 DNPHVCRLLGICLTST-VQLIMQLMPFGCL 110
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 7/97 (7%)
Query: 665 LYTLRQIKAATNNFDPANKVGEGGFGSVY----KGILSD--GTVIAVKQLSSKSRQGNR- 717
+Y + + A + ++G+G FG VY KG++ D T +A+K ++ + R
Sbjct: 7 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 66
Query: 718 EFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYM 754
EF+NE ++ ++V+L G +G L++ E M
Sbjct: 67 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELM 103
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 7/97 (7%)
Query: 665 LYTLRQIKAATNNFDPANKVGEGGFGSVY----KGILSD--GTVIAVKQLSSKSRQGNR- 717
+Y + + A + ++G+G FG VY KG++ D T +A+K ++ + R
Sbjct: 4 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 63
Query: 718 EFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYM 754
EF+NE ++ ++V+L G +G L++ E M
Sbjct: 64 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELM 100
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 43/73 (58%), Gaps = 6/73 (8%)
Query: 676 NNFDPANKVGEGGFGSVYKGI-LSDGT----VIAVKQL-SSKSRQGNREFVNEIGMISAQ 729
F +G G FG+VYKG+ + +G +A+K+L + S + N+E ++E ++++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 730 QHPNLVKLYGCCV 742
+P++ +L G C+
Sbjct: 75 DNPHVCRLLGICL 87
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 7/97 (7%)
Query: 665 LYTLRQIKAATNNFDPANKVGEGGFGSVY----KGILSD--GTVIAVKQLSSKSRQGNR- 717
+Y + + A + ++G+G FG VY KG++ D T +A+K ++ + R
Sbjct: 14 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 73
Query: 718 EFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYM 754
EF+NE ++ ++V+L G +G L++ E M
Sbjct: 74 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELM 110
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 683 KVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCV 742
K+G+G FG V+ G + T +A+K L + F+ E ++ +H LV+LY
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 743 EGNQLLLVYEYMKNNCLSRAIFGKL 767
E + +V EYM L + G++
Sbjct: 84 E-EPIYIVTEYMSKGSLLDFLKGEM 107
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 683 KVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCV 742
K+G+G FG V+ G + T +A+K L + F+ E ++ +H LV+LY
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 743 EGNQLLLVYEYMKNNCLSRAIFGKL 767
E + +V EYM L + G++
Sbjct: 84 E-EPIYIVTEYMSKGSLLDFLKGEM 107
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 683 KVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCV 742
K+G+G FG V+ G + T +A+K L + F+ E ++ +H LV+LY
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 743 EGNQLLLVYEYMKNNCL 759
E + +V EYM L
Sbjct: 250 E-EPIYIVTEYMSKGSL 265
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 683 KVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGN---REFVNEIGMISAQQHPNLVKLYG 739
K+G+G FG V+ G + T +A+K L + GN F+ E ++ +H LV+LY
Sbjct: 192 KLGQGCFGEVWMGTWNGTTRVAIKTL----KPGNMSPEAFLQEAQVMKKLRHEKLVQLYA 247
Query: 740 CCVEGNQLLLVYEYMKNNCLSRAIFGKL 767
E + +V EYM L + G++
Sbjct: 248 VVSE-EPIYIVTEYMSKGSLLDFLKGEM 274
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 681 ANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGC 740
++G G FG+VYKG + + +++ + Q + F NE+G++ +H N++ G
Sbjct: 17 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 76
Query: 741 CVEGNQLLLVYEYMKNNCL 759
+ QL +V ++ + + L
Sbjct: 77 STK-PQLAIVTQWCEGSSL 94
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 683 KVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCV 742
K+G+G FG V+ G + T +A+K L + F+ E ++ +H LV+LY
Sbjct: 274 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 332
Query: 743 EGNQLLLVYEYMKNNCL 759
E + +V EYM L
Sbjct: 333 E-EPIYIVTEYMSKGSL 348
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 682 NKVGEGGFGSV---YKGILSD--GTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVK 736
+++G+G FGSV L D G ++AVKQL R+F EI ++ A +VK
Sbjct: 17 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 76
Query: 737 LYGCCV-EGNQ-LLLVYEYMKNNCL 759
G G Q L LV EY+ + CL
Sbjct: 77 YRGVSYGPGRQSLRLVMEYLPSGCL 101
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 7/97 (7%)
Query: 665 LYTLRQIKAATNNFDPANKVGEGGFGSVY----KGILSD--GTVIAVKQLSSKSRQGNR- 717
+Y + + A + ++G+G FG VY KG++ D T +A+K ++ + R
Sbjct: 7 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 66
Query: 718 EFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYM 754
EF+NE ++ ++V+L G +G L++ E M
Sbjct: 67 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELM 103
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 7/97 (7%)
Query: 665 LYTLRQIKAATNNFDPANKVGEGGFGSVY----KGILSD--GTVIAVKQLSSKSRQGNR- 717
+Y + + A + ++G+G FG VY KG++ D T +A+K ++ + R
Sbjct: 1 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 60
Query: 718 EFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYM 754
EF+NE ++ ++V+L G +G L++ E M
Sbjct: 61 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELM 97
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 683 KVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCV 742
K+G+G FG V+ G + T +A+K L + F+ E ++ +H LV+LY
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 743 EGNQLLLVYEYMKNNCL 759
E + +V EYM L
Sbjct: 250 E-EPIYIVTEYMSKGSL 265
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 681 ANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGC 740
++G G FG+VYKG + + +++ + Q + F NE+G++ +H N++ G
Sbjct: 29 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 741 CVEGNQLLLVYEYMKNNCL 759
+ QL +V ++ + + L
Sbjct: 89 STK-PQLAIVTQWCEGSSL 106
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 682 NKVGEGGFGSV---YKGILSD--GTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVK 736
+++G+G FGSV L D G ++AVKQL R+F EI ++ A +VK
Sbjct: 29 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 88
Query: 737 LYGCCV-EGNQ-LLLVYEYMKNNCL 759
G G Q L LV EY+ + CL
Sbjct: 89 YRGVSYGPGRQSLRLVMEYLPSGCL 113
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 7/97 (7%)
Query: 665 LYTLRQIKAATNNFDPANKVGEGGFGSVY----KGILSD--GTVIAVKQLSSKSRQGNR- 717
+Y + + A + ++G+G FG VY KG++ D T +A+K ++ + R
Sbjct: 8 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 67
Query: 718 EFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYM 754
EF+NE ++ ++V+L G +G L++ E M
Sbjct: 68 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELM 104
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 681 ANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGC 740
++G G FG+VYKG + + +++ + Q + F NE+G++ +H N++ G
Sbjct: 29 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 741 CVEGNQLLLVYEYMKNNCL 759
QL +V ++ + + L
Sbjct: 89 ST-APQLAIVTQWCEGSSL 106
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 7/97 (7%)
Query: 665 LYTLRQIKAATNNFDPANKVGEGGFGSVY----KGILSD--GTVIAVKQLSSKSRQGNR- 717
+Y + + A + ++G+G FG VY KG++ D T +A+K ++ + R
Sbjct: 36 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 95
Query: 718 EFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYM 754
EF+NE ++ ++V+L G +G L++ E M
Sbjct: 96 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELM 132
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 48/95 (50%), Gaps = 11/95 (11%)
Query: 674 ATNNFDPANKVGEGGFGSVYKGI-LSDGTVIAVKQLSSKSRQGNREF--VNEIGM---IS 727
AT+ ++P ++G G +G+VYK G +A+K + + + V E+ + +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 728 AQQHPNLVKLYGCCVEGN-----QLLLVYEYMKNN 757
A +HPN+V+L C ++ LV+E++ +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQD 96
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 48/95 (50%), Gaps = 11/95 (11%)
Query: 674 ATNNFDPANKVGEGGFGSVYKGI-LSDGTVIAVKQLSSKSRQGNREF--VNEIGM---IS 727
AT+ ++P ++G G +G+VYK G +A+K + + + V E+ + +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 728 AQQHPNLVKLYGCCVEGN-----QLLLVYEYMKNN 757
A +HPN+V+L C ++ LV+E++ +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQD 96
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 683 KVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCV 742
K+G+G FG V+ G + T +A+K L + F+ E ++ +H LV+LY
Sbjct: 18 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 76
Query: 743 EGNQLLLVYEYMKNNCL 759
E + +V EYM L
Sbjct: 77 E-EPIYIVTEYMSKGSL 92
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 48/95 (50%), Gaps = 11/95 (11%)
Query: 674 ATNNFDPANKVGEGGFGSVYKGI-LSDGTVIAVKQLSSKSRQGNREF--VNEIGM---IS 727
AT+ ++P ++G G +G+VYK G +A+K + + + V E+ + +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 728 AQQHPNLVKLYGCCVEGN-----QLLLVYEYMKNN 757
A +HPN+V+L C ++ LV+E++ +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQD 96
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 683 KVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCV 742
K+G+G FG V+ G + T +A+K L + F+ E ++ +H LV+LY
Sbjct: 15 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 73
Query: 743 EGNQLLLVYEYMKNNCL 759
E + +V EYM L
Sbjct: 74 E-EPIXIVTEYMSKGSL 89
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 676 NNFDPANKVGEGGFGSVYKGI-LSDGT----VIAVKQL-SSKSRQGNREFVNEIGMISAQ 729
F + G FG+VYKG+ + +G +A+K+L + S + N+E ++E ++++
Sbjct: 15 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEYMKNNCL 759
+P++ +L G C+ + L+ + M CL
Sbjct: 75 DNPHVCRLLGICLTST-VQLITQLMPFGCL 103
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 683 KVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCV 742
K+G+G FG V+ G + T +A+K L + F+ E ++ +H LV+LY
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKIRHEKLVQLYAVVS 83
Query: 743 EGNQLLLVYEYMKNNCLSRAIFGKL 767
E + +V EYM L + G++
Sbjct: 84 E-EPIYIVTEYMSKGSLLDFLKGEM 107
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 683 KVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCV 742
K+G+G FG V+ G + T +A+K L + F+ E ++ +H LV+LY
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 743 EGNQLLLVYEYMKNNCL 759
E + +V EYM L
Sbjct: 81 E-EPIYIVTEYMNKGSL 96
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 683 KVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCV 742
K+G+G FG V+ G + T +A+K L + F+ E ++ +H LV+LY
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 743 EGNQLLLVYEYMKNNCLSRAIFGKL 767
E + +V EYM L + G++
Sbjct: 84 E-EPIYIVCEYMSKGSLLDFLKGEM 107
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 676 NNFDPANKVGEGGFGSVYKGI-LSDGT----VIAVKQL-SSKSRQGNREFVNEIGMISAQ 729
F + G FG+VYKG+ + +G +A+K+L + S + N+E ++E ++++
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEYMKNNCL 759
+P++ +L G C+ + L+ + M CL
Sbjct: 82 DNPHVCRLLGICLTST-VQLITQLMPFGCL 110
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 683 KVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCV 742
K+G+G FG V+ G + T +A+K L + F+ E ++ +H LV+LY
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 743 EGNQLLLVYEYMKNNCL 759
E + +V EYM L
Sbjct: 81 E-EPIYIVTEYMNKGSL 96
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Query: 684 VGEGGFGSVYKGILSD-GTVIAVKQL--SSKSRQGNREFVNEIGMISAQQHPNLVKLYGC 740
VGEG +G V K D G ++A+K+ S + + + EI ++ +H NLV L
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEV 92
Query: 741 CVEGNQLLLVYEYMKNNCLS 760
C + + LV+E++ + L
Sbjct: 93 CKKKKRWYLVFEFVDHTILD 112
>pdb|3VQ1|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX
pdb|3VQ1|B Chain B, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX
pdb|3VQ2|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LPS COMPLEX
pdb|3VQ2|B Chain B, Crystal Structure Of Mouse Tlr4MD-2LPS COMPLEX
Length = 606
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 237 IQKLHIQGSSLEGPIPASISALTSLTDLRISDLK-GSESAFPKLDKMNLKTLILTKCLIH 295
+ L + G+ ++ P S S LTSL +L + K S +FP + LK L + IH
Sbjct: 82 LSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIH 141
Query: 296 G-EIPDYIGDMTKLKNIDLSFN 316
++P Y ++T L ++DLS+N
Sbjct: 142 SCKLPAYFSNLTNLVHVDLSYN 163
>pdb|2Z64|A Chain A, Crystal Structure Of Mouse Tlr4 And Mouse Md-2 Complex
Length = 599
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 237 IQKLHIQGSSLEGPIPASISALTSLTDLRISDLK-GSESAFPKLDKMNLKTLILTKCLIH 295
+ L + G+ ++ P S S LTSL +L + K S +FP + LK L + IH
Sbjct: 77 LSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIH 136
Query: 296 G-EIPDYIGDMTKLKNIDLSFN 316
++P Y ++T L ++DLS+N
Sbjct: 137 SCKLPAYFSNLTNLVHVDLSYN 158
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 677 NFDPANKVGEGGFGSVYKGI-LSDGTVIAVKQLSSKSRQGNREFV-NEIGMISAQQHPNL 734
+F+P +G GGFG V++ D A+K++ +R+ RE V E+ ++ +HP +
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI 65
Query: 735 VKLYGCCVEGN 745
V+ + +E N
Sbjct: 66 VRYFNAWLEKN 76
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 683 KVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCV 742
K+G+G FG V+ G + T +A+K L + F+ E ++ +H LV+LY
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 743 EGNQLLLVYEYMKNNCL 759
E + +V EYM L
Sbjct: 250 E-EPIYIVGEYMSKGSL 265
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 8/91 (8%)
Query: 673 AATNNFDPANKVGEGGFGSVYKGI-LSDGTVIAVKQLSSK-----SRQGNREFVNEIGMI 726
A N+ +GEG FG V + G +A+K ++ K QG E EI +
Sbjct: 1 AHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYL 58
Query: 727 SAQQHPNLVKLYGCCVEGNQLLLVYEYMKNN 757
+HP+++KLY +++++V EY N
Sbjct: 59 RLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE 89
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 5/107 (4%)
Query: 676 NNFDPANKVGEGGFGSVYKGILSDGT-VIAVKQL--SSKSRQG-NREFVNEIGMISAQQH 731
+FD +G+G FG+VY ++A+K L + + G + E+ + S +H
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 732 PNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATF 778
PN+++LYG + ++ L+ EY + R + KL F AT+
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSRFDEQRTATY 117
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Query: 682 NKVGEGGFGSV---YKGILSD--GTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVK 736
+++G+G FGSV L D G ++AVKQL R+F EI ++ A +VK
Sbjct: 13 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 72
Query: 737 LYGCCVEGN--QLLLVYEYMKNNCL 759
G +L LV EY+ + CL
Sbjct: 73 YRGVSYGPGRPELRLVMEYLPSGCL 97
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 5/107 (4%)
Query: 676 NNFDPANKVGEGGFGSVYKGILSDGT-VIAVKQL--SSKSRQG-NREFVNEIGMISAQQH 731
+FD +G+G FG+VY ++A+K L + + G + E+ + S +H
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 732 PNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATF 778
PN+++LYG + ++ L+ EY + R + KL F AT+
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSRFDEQRTATY 117
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 8/91 (8%)
Query: 673 AATNNFDPANKVGEGGFGSVYKGI-LSDGTVIAVKQLSSK-----SRQGNREFVNEIGMI 726
A N+ +GEG FG V + G +A+K ++ K QG E EI +
Sbjct: 5 AHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYL 62
Query: 727 SAQQHPNLVKLYGCCVEGNQLLLVYEYMKNN 757
+HP+++KLY +++++V EY N
Sbjct: 63 RLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE 93
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 52/105 (49%), Gaps = 4/105 (3%)
Query: 663 TGLYTLRQIKAATNNFDPANKVGEGGFGSVYKGILSDGT-VIAVKQL--SSKSRQG-NRE 718
T L + + K ++FD +G+G FG+VY ++A+K L S ++G +
Sbjct: 1 TALAEMPKRKFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQ 60
Query: 719 FVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAI 763
EI + S +HPN++++Y + ++ L+ E+ L + +
Sbjct: 61 LRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL 105
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 52/105 (49%), Gaps = 4/105 (3%)
Query: 663 TGLYTLRQIKAATNNFDPANKVGEGGFGSVYKGILSDGT-VIAVKQL--SSKSRQG-NRE 718
T L + + K ++FD +G+G FG+VY ++A+K L S ++G +
Sbjct: 1 TALAEMPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQ 60
Query: 719 FVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAI 763
EI + S +HPN++++Y + ++ L+ E+ L + +
Sbjct: 61 LRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL 105
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 8/91 (8%)
Query: 673 AATNNFDPANKVGEGGFGSVYKGI-LSDGTVIAVKQLSSK-----SRQGNREFVNEIGMI 726
A N+ +GEG FG V + G +A+K ++ K QG E EI +
Sbjct: 10 AHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYL 67
Query: 727 SAQQHPNLVKLYGCCVEGNQLLLVYEYMKNN 757
+HP+++KLY +++++V EY N
Sbjct: 68 RLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE 98
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 58/119 (48%), Gaps = 5/119 (4%)
Query: 664 GLYTLRQIKAATNNFDPANKVGEGGFGSVYKGILSDGT-VIAVKQL--SSKSRQG-NREF 719
G + ++ + A +F+ +G+G FG+VY ++A+K L + + G +
Sbjct: 1 GSHMSKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 60
Query: 720 VNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATF 778
E+ + S +HPN+++LYG + ++ L+ EY + R + KL F AT+
Sbjct: 61 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATY 118
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 52/105 (49%), Gaps = 4/105 (3%)
Query: 663 TGLYTLRQIKAATNNFDPANKVGEGGFGSVYKGILSDGT-VIAVKQL--SSKSRQG-NRE 718
T L + + K ++FD +G+G FG+VY ++A+K L S ++G +
Sbjct: 2 TALAEMPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQ 61
Query: 719 FVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAI 763
EI + S +HPN++++Y + ++ L+ E+ L + +
Sbjct: 62 LRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL 106
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 8/91 (8%)
Query: 673 AATNNFDPANKVGEGGFGSVYKGI-LSDGTVIAVKQLSSK-----SRQGNREFVNEIGMI 726
A N+ +GEG FG V + G +A+K ++ K QG E EI +
Sbjct: 11 AHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYL 68
Query: 727 SAQQHPNLVKLYGCCVEGNQLLLVYEYMKNN 757
+HP+++KLY +++++V EY N
Sbjct: 69 RLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE 99
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 54/109 (49%), Gaps = 5/109 (4%)
Query: 674 ATNNFDPANKVGEGGFGSVYKGILSDGT-VIAVKQL--SSKSRQG-NREFVNEIGMISAQ 729
A +F+ +G+G FG+VY + ++A+K L + + G + E+ + S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATF 778
+HPN+++LYG + ++ L+ EY + R + KL F AT+
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYREL-QKLSKFDEQRTATY 113
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Query: 670 QIKAATNNFDPANKVGEGGFGSVY----KGILSD--GTVIAVKQLSSKSRQGNR-EFVNE 722
+ + A + ++G+G FG VY KG++ D T +A+K ++ + R EF+NE
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 63
Query: 723 IGMISAQQHPNLVKLYGCCVEGNQLLLVYEYM 754
++ ++V+L G +G L++ E M
Sbjct: 64 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELM 95
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 15/91 (16%)
Query: 682 NKVGEGGFGSVYKGIL----SDGTVIAVKQ-----LSSKSRQGNREFVNEIGMISAQQHP 732
K+GEG FG K IL DG +K+ +SSK R+ +R E+ +++ +HP
Sbjct: 30 QKIGEGSFG---KAILVKSTEDGRQYVIKEINISRMSSKEREESR---REVAVLANMKHP 83
Query: 733 NLVKLYGCCVEGNQLLLVYEYMKNNCLSRAI 763
N+V+ E L +V +Y + L + I
Sbjct: 84 NIVQYRESFEENGSLYIVMDYCEGGDLFKRI 114
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 51/109 (46%), Gaps = 5/109 (4%)
Query: 674 ATNNFDPANKVGEGGFGSVYKGILSDGT-VIAVKQLSSKSRQG---NREFVNEIGMISAQ 729
A +F+ +G+G FG+VY ++A+K L + + E+ + S
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATF 778
+HPN+++LYG + ++ L+ EY + R + KL F AT+
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATY 112
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Query: 670 QIKAATNNFDPANKVGEGGFGSVY----KGILSD--GTVIAVKQLSSKSRQGNR-EFVNE 722
+ + A + ++G+G FG VY KG++ D T +A+K ++ + R EF+NE
Sbjct: 10 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 69
Query: 723 IGMISAQQHPNLVKLYGCCVEGNQLLLVYEYM 754
++ ++V+L G +G L++ E M
Sbjct: 70 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELM 101
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 51/109 (46%), Gaps = 5/109 (4%)
Query: 674 ATNNFDPANKVGEGGFGSVYKGILSDGT-VIAVKQLSSKSRQG---NREFVNEIGMISAQ 729
A +F+ +G+G FG+VY ++A+K L + + E+ + S
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATF 778
+HPN+++LYG + ++ L+ EY + R + KL F AT+
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATY 116
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 51/109 (46%), Gaps = 5/109 (4%)
Query: 674 ATNNFDPANKVGEGGFGSVYKGILSDGT-VIAVKQLSSKSRQG---NREFVNEIGMISAQ 729
A +F+ +G+G FG+VY ++A+K L + + E+ + S
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATF 778
+HPN+++LYG + ++ L+ EY + R + KL F AT+
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATY 116
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
Query: 674 ATNNFDPANKVGEGGFGSVYKGILSDGT-VIAVKQL--SSKSRQG-NREFVNEIGMISAQ 729
A +F+ +G+G FG+VY ++A+K L + + G + E+ + S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATF 778
+HPN+++LYG + ++ L+ EY + R + KL F AT+
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATY 113
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 51/109 (46%), Gaps = 5/109 (4%)
Query: 674 ATNNFDPANKVGEGGFGSVYKGILSDGT-VIAVKQLSSKSRQG---NREFVNEIGMISAQ 729
A +F+ +G+G FG+VY ++A+K L + + E+ + S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATF 778
+HPN+++LYG + ++ L+ EY + R + KL F AT+
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATY 113
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 51/109 (46%), Gaps = 5/109 (4%)
Query: 674 ATNNFDPANKVGEGGFGSVYKGILSDGT-VIAVKQLSSKSRQG---NREFVNEIGMISAQ 729
A +F+ +G+G FG+VY ++A+K L + + E+ + S
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATF 778
+HPN+++LYG + ++ L+ EY + R + KL F AT+
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATY 116
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 51/109 (46%), Gaps = 5/109 (4%)
Query: 674 ATNNFDPANKVGEGGFGSVYKGILSDGT-VIAVKQLSSKSRQG---NREFVNEIGMISAQ 729
A +F+ +G+G FG+VY ++A+K L + + E+ + S
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATF 778
+HPN+++LYG + ++ L+ EY + R + KL F AT+
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATY 116
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 79/179 (44%), Gaps = 9/179 (5%)
Query: 143 ELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDI-RKLINLQKLILSSNSFTG 201
+L + N+LS K +T L+ L + N ++P I ++L NL+ L ++ N
Sbjct: 41 KLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNKLQA 99
Query: 202 ELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSL 261
+L NL +LR+ N P K+ L + + L+ LTSL
Sbjct: 100 LPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSL 159
Query: 262 TDLRI--SDLKG-SESAFPKLDKMNLKTLILTKCLIHGEIPDYIGD-MTKLKNIDLSFN 316
+LR+ + LK E AF KL LKTL L + +P+ D + KLK + L N
Sbjct: 160 KELRLYNNQLKRVPEGAFDKL--TELKTLKLDNNQLK-RVPEGAFDSLEKLKMLQLQEN 215
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 72/176 (40%), Gaps = 32/176 (18%)
Query: 178 SIPPDIRKLINLQKLILSSNSFTGELPAE-LTKLTNLNDLRISDNNFSGKIPEFIGKWKK 236
+IP D +KL +LQ LSS LP++ +LT L L ++DN + K
Sbjct: 34 NIPADTKKL-DLQSNKLSS------LPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKN 86
Query: 237 IQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHG 296
++ L + + L+ L +L +LR LD+ LK+L
Sbjct: 87 LETLWVTDNKLQALPIGVFDQLVNLAELR-------------LDRNQLKSLP-------- 125
Query: 297 EIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIFN 352
P +TKL + L +N L F+KL + L N+L VP+ F+
Sbjct: 126 --PRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKR-VPEGAFD 178
Score = 30.4 bits (67), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 12/94 (12%)
Query: 309 KNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIFNSNKNVDISLNNFTWES 368
K +DL N L+ F +L K +YL NKL +P IF KN++ W +
Sbjct: 40 KKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQT-LPAGIFKELKNLET-----LWVT 93
Query: 369 SDPIEC-PRGS----VNLVESYSSPRNKLDKVHP 397
+ ++ P G VNL E RN+L + P
Sbjct: 94 DNKLQALPIGVFDQLVNLAE-LRLDRNQLKSLPP 126
Score = 29.3 bits (64), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 80/199 (40%), Gaps = 18/199 (9%)
Query: 84 TCDCSSATCHVVTIALKAQ--------NLTGTLPTE----LSKLRYLKQLDLSRNCLTGS 131
+ DCSS + + A N +LP++ L+KLR L D L
Sbjct: 20 SVDCSSKKLTAIPSNIPADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAG 79
Query: 132 FSPQWASLQLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDI-RKLINLQ 190
+ +L+ L V N+L V + L L ++ N S+PP + L L
Sbjct: 80 IFKELKNLE--TLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLK-SLPPRVFDSLTKLT 136
Query: 191 KLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPE-FIGKWKKIQKLHIQGSSLEG 249
L L N KLT+L +LR+ +N ++PE K +++ L + + L+
Sbjct: 137 YLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLK-RVPEGAFDKLTELKTLKLDNNQLKR 195
Query: 250 PIPASISALTSLTDLRISD 268
+ +L L L++ +
Sbjct: 196 VPEGAFDSLEKLKMLQLQE 214
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 51/109 (46%), Gaps = 5/109 (4%)
Query: 674 ATNNFDPANKVGEGGFGSVYKGILSDGT-VIAVKQLSSKSRQG---NREFVNEIGMISAQ 729
A +F+ +G+G FG+VY ++A+K L + + E+ + S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATF 778
+HPN+++LYG + ++ L+ EY + R + KL F AT+
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATY 113
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
Query: 674 ATNNFDPANKVGEGGFGSVYKGILSDGT-VIAVKQL--SSKSRQG-NREFVNEIGMISAQ 729
A +F+ +G+G FG+VY ++A+K L + + G + E+ + S
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATF 778
+HPN+++LYG + ++ L+ EY + R + KL F AT+
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATY 117
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
Query: 674 ATNNFDPANKVGEGGFGSVYKGILSDGT-VIAVKQL--SSKSRQG-NREFVNEIGMISAQ 729
A +F+ +G+G FG+VY ++A+K L + + G + E+ + S
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATF 778
+HPN+++LYG + ++ L+ EY + R + KL F AT+
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATY 114
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
Query: 674 ATNNFDPANKVGEGGFGSVYKGILSDGT-VIAVKQL--SSKSRQG-NREFVNEIGMISAQ 729
A +F+ +G+G FG+VY ++A+K L + + G + E+ + S
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATF 778
+HPN+++LYG + ++ L+ EY + R + KL F AT+
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATY 114
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
Query: 674 ATNNFDPANKVGEGGFGSVYKGILSDGT-VIAVKQL--SSKSRQG-NREFVNEIGMISAQ 729
A +F+ +G+G FG+VY ++A+K L + + G + E+ + S
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATF 778
+HPN+++LYG + ++ L+ EY + R + KL F AT+
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATY 114
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Query: 670 QIKAATNNFDPANKVGEGGFGSVY----KGILSD--GTVIAVKQLSSKSRQGNR-EFVNE 722
+ + A + ++G+G FG VY KG++ D T +A+K ++ + R EF+NE
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 723 IGMISAQQHPNLVKLYGCCVEGNQLLLVYEYM 754
++ ++V+L G +G L++ E M
Sbjct: 66 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELM 97
>pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
pdb|3KJ4|D Chain D, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
Length = 286
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 55/126 (43%), Gaps = 3/126 (2%)
Query: 235 KKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKM--NLKTLILTKC 292
+ + L + ++L G A+ + LT L L +SD P + +L TL L +C
Sbjct: 55 RNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDPTTFRGLGHLHTLHLDRC 114
Query: 293 LIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIFN 352
+ P + L+ + L NNL TF L ++L GN++ VP++ F
Sbjct: 115 GLQELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGNRIPS-VPEHAFR 173
Query: 353 SNKNVD 358
++D
Sbjct: 174 GLHSLD 179
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 60/138 (43%), Gaps = 8/138 (5%)
Query: 141 LVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFT 200
L L + GNR+ + +L L + N P R L L L L +N+ +
Sbjct: 154 LTHLFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFANNLS 213
Query: 201 GELPAE-LTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGP--IPASISA 257
LPAE L L +L LR++DN + W +QK +GSS E P +P ++
Sbjct: 214 -MLPAEVLVPLRSLQYLRLNDNPWVCDC-RARPLWAWLQK--FRGSSSEVPCNLPQRLAG 269
Query: 258 LTSLTDLRISDLKGSESA 275
L L SDL+G A
Sbjct: 270 -RDLKRLAASDLEGCAVA 286
Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 81/208 (38%), Gaps = 12/208 (5%)
Query: 166 KNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDN-NFS 224
+ + + GN + + NL L L SN+ G A T LT L L +SDN
Sbjct: 34 QRIFLHGNRISYVPAASFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLR 93
Query: 225 GKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNL 284
P + LH+ L+ P L +L L + D + A P +L
Sbjct: 94 VVDPTTFRGLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQD--NNLQALPDNTFRDL 151
Query: 285 KTLILTKCLIHG----EIPDY-IGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTG 339
LT +HG +P++ + L + L N++ P F L + +YL
Sbjct: 152 GN--LTHLFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFA 209
Query: 340 NKLTGPVPKYIFNSNKNVD-ISLNNFTW 366
N L+ +P + +++ + LN+ W
Sbjct: 210 NNLSM-LPAEVLVPLRSLQYLRLNDNPW 236
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 683 KVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCV 742
++G G FG V+ G + T +A+K L + F+ E ++ +H LV+LY
Sbjct: 16 RLGNGQFGEVWMGTWNGNTKVAIKTLKPGT-MSPESFLEEAQIMKKLKHDKLVQLYAVVS 74
Query: 743 EGNQLLLVYEYMKNNCL 759
E + +V EYM L
Sbjct: 75 E-EPIYIVTEYMNKGSL 90
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
Query: 674 ATNNFDPANKVGEGGFGSVYKGILSDGT-VIAVKQL--SSKSRQG-NREFVNEIGMISAQ 729
A +F+ +G+G FG+VY ++A+K L + + G + E+ + S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATF 778
+HPN+++LYG + ++ L+ EY + R + KL F AT+
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATY 113
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 51/109 (46%), Gaps = 5/109 (4%)
Query: 674 ATNNFDPANKVGEGGFGSVYKGILSDGT-VIAVKQLSSKSRQG---NREFVNEIGMISAQ 729
A +F+ +G+G FG+VY ++A+K L + + E+ + S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATF 778
+HPN+++LYG + ++ L+ EY + R + KL F AT+
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATY 113
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/102 (21%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
Query: 683 KVGEGGFGSVYKGILSDGTV-IAVKQLSSK--SRQGNREFVNEIGMISAQQHPNLVKLYG 739
++G G F +VYKG+ ++ TV +A +L + ++ + F E + QHPN+V+ Y
Sbjct: 33 EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 740 ---CCVEGNQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATF 778
V+G + +++ + + + + ++ I + ++
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSW 134
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 682 NKVGEGGFGSVYKGILSD------GTVIAVKQLSSKSRQGNR-EFVNEIGMISAQQHPNL 734
++G+G FG VY+G D T +AVK ++ + R EF+NE ++ ++
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 735 VKLYGCCVEGNQLLLVYEYMKNNCL 759
V+L G +G L+V E M + L
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDL 107
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
Query: 674 ATNNFDPANKVGEGGFGSVYKGILSDGT-VIAVKQL--SSKSRQG-NREFVNEIGMISAQ 729
A +F+ +G+G FG+VY ++A+K L + + G + E+ + S
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATF 778
+HPN+++LYG + ++ L+ EY + R + KL F AT+
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATY 139
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
Query: 674 ATNNFDPANKVGEGGFGSVYKGILSDGT-VIAVKQL--SSKSRQG-NREFVNEIGMISAQ 729
A +F+ +G+G FG+VY ++A+K L + + G + E+ + S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATF 778
+HPN+++LYG + ++ L+ EY + R + KL F AT+
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATY 113
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
Query: 674 ATNNFDPANKVGEGGFGSVYKGILSDGT-VIAVKQL--SSKSRQG-NREFVNEIGMISAQ 729
A +F+ +G+G FG+VY ++A+K L + + G + E+ + S
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATF 778
+HPN+++LYG + ++ L+ EY + R + KL F AT+
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATY 115
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 51/109 (46%), Gaps = 5/109 (4%)
Query: 674 ATNNFDPANKVGEGGFGSVYKGILSDGT-VIAVKQLSSKSRQG---NREFVNEIGMISAQ 729
A +F+ +G+G FG+VY ++A+K L + + E+ + S
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATF 778
+HPN+++LYG + ++ L+ EY + R + KL F AT+
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATY 116
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
Query: 674 ATNNFDPANKVGEGGFGSVYKGILSDGT-VIAVKQL--SSKSRQG-NREFVNEIGMISAQ 729
A +F+ +G+G FG+VY ++A+K L + + G + E+ + S
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATF 778
+HPN+++LYG + ++ L+ EY + R + KL F AT+
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATY 139
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
Query: 674 ATNNFDPANKVGEGGFGSVYKGILSDGT-VIAVKQL--SSKSRQG-NREFVNEIGMISAQ 729
A +F+ +G+G FG+VY ++A+K L + + G + E+ + S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATF 778
+HPN+++LYG + ++ L+ EY + R + KL F AT+
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATY 113
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 683 KVGEGGFGSVYKGILSD------GTVIAVKQLSSKSRQGNR-EFVNEIGMISAQQHPNLV 735
++G+G FG VY+G D T +AVK ++ + R EF+NE ++ ++V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 736 KLYGCCVEGNQLLLVYEYMKNNCL 759
+L G +G L+V E M + L
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDL 107
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/96 (21%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Query: 674 ATNNFDPANKVGEGGFGSVYKG--ILSDGTVIAVKQLSSKSRQGNREF--VNEIGM---I 726
A ++ ++GEG +G V+K + + G +A+K++ ++ + + E+ + +
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 727 SAQQHPNLVKLYGCCV-----EGNQLLLVYEYMKNN 757
+HPN+V+L+ C +L LV+E++ +
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQD 104
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 682 NKVGEGGFGSVYKGILSD------GTVIAVKQLSSKSRQGNR-EFVNEIGMISAQQHPNL 734
++G+G FG VY+G D T +AVK ++ + R EF+NE ++ ++
Sbjct: 20 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 79
Query: 735 VKLYGCCVEGNQLLLVYEYMKNNCL 759
V+L G +G L+V E M + L
Sbjct: 80 VRLLGVVSKGQPTLVVMELMAHGDL 104
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
Query: 674 ATNNFDPANKVGEGGFGSVYKGILSDGT-VIAVKQL--SSKSRQG-NREFVNEIGMISAQ 729
A +F+ +G+G FG+VY ++A+K L + + G + E+ + S
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATF 778
+HPN+++LYG + ++ L+ EY + R + KL F AT+
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATY 115
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 682 NKVGEGGFGSVYKGILSD------GTVIAVKQLSSKSRQGNR-EFVNEIGMISAQQHPNL 734
++G+G FG VY+G D T +AVK ++ + R EF+NE ++ ++
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 735 VKLYGCCVEGNQLLLVYEYMKNNCL 759
V+L G +G L+V E M + L
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDL 107
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
Query: 674 ATNNFDPANKVGEGGFGSVYKGILSDGT-VIAVKQL--SSKSRQG-NREFVNEIGMISAQ 729
A +F+ +G+G FG+VY ++A+K L + + G + E+ + S
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATF 778
+HPN+++LYG + ++ L+ EY + R + KL F AT+
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATY 118
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/96 (21%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Query: 674 ATNNFDPANKVGEGGFGSVYKG--ILSDGTVIAVKQLSSKSRQGNREF--VNEIGM---I 726
A ++ ++GEG +G V+K + + G +A+K++ ++ + + E+ + +
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 727 SAQQHPNLVKLYGCCV-----EGNQLLLVYEYMKNN 757
+HPN+V+L+ C +L LV+E++ +
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQD 104
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
Query: 674 ATNNFDPANKVGEGGFGSVYKGILSDGT-VIAVKQL--SSKSRQG-NREFVNEIGMISAQ 729
A +F+ +G+G FG+VY ++A+K L + + G + E+ + S
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATF 778
+HPN+++LYG + ++ L+ EY + R + KL F AT+
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATY 118
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
Query: 674 ATNNFDPANKVGEGGFGSVYKGILSDGT-VIAVKQL--SSKSRQG-NREFVNEIGMISAQ 729
A +F+ +G+G FG+VY ++A+K L + + G + E+ + S
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATF 778
+HPN+++LYG + ++ L+ EY + R + KL F AT+
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATY 130
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 682 NKVGEGGFGSVYKGILSD------GTVIAVKQLSSKSRQGNR-EFVNEIGMISAQQHPNL 734
++G+G FG VY+G D T +AVK ++ + R EF+NE ++ ++
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 735 VKLYGCCVEGNQLLLVYEYMKNNCL 759
V+L G +G L+V E M + L
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDL 107
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 48/98 (48%), Gaps = 14/98 (14%)
Query: 674 ATNNFDPANKVGEGGFGSVYKGI-LSDGTVIAVKQLSSKSRQGNREF-----VNEIGM-- 725
AT+ ++P ++G G +G+VYK G +A+K + + G V E+ +
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 726 -ISAQQHPNLVKLYGCCVEGN-----QLLLVYEYMKNN 757
+ A +HPN+V+L C ++ LV+E++ +
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQD 104
>pdb|3ZYN|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
pdb|3ZYN|B Chain B, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
Length = 321
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 101/220 (45%), Gaps = 26/220 (11%)
Query: 184 RKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQ 243
+ L +L+ L LS N L +LN L + DN + + K+++L ++
Sbjct: 56 KHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLR 115
Query: 244 GSSLEGPIPASISALTSLTDLRISDLKG----SESAFPKLDKMNLKTLILTKCLIHGEIP 299
+ +E + + + SL L + +LK SE+AF L +NL+ L L C + +IP
Sbjct: 116 NNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGL--VNLRYLNLGMCNL-KDIP 172
Query: 300 DYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIFNSNKNVD- 358
+ + +L+ ++LS N L P +F+ L ++L ++ + + F+ K+++
Sbjct: 173 NLTA-LVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQV-ATIERNAFDDLKSLEE 230
Query: 359 --ISLNNFTWESSDPIECPRGSVNLVESYSSPRNKLDKVH 396
+S NN ++L +P ++L++VH
Sbjct: 231 LNLSHNNL--------------MSLPHDLFTPLHRLERVH 256
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 51/109 (46%), Gaps = 5/109 (4%)
Query: 674 ATNNFDPANKVGEGGFGSVYKGILSDGT-VIAVKQLSSKSRQG---NREFVNEIGMISAQ 729
A +F+ +G+G FG+VY ++A+K L + + E+ + S
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATF 778
+HPN+++LYG + ++ L+ EY + R + KL F AT+
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATY 110
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/96 (21%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Query: 674 ATNNFDPANKVGEGGFGSVYKG--ILSDGTVIAVKQLSSKSRQGNREF--VNEIGM---I 726
A ++ ++GEG +G V+K + + G +A+K++ ++ + + E+ + +
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 727 SAQQHPNLVKLYGCCV-----EGNQLLLVYEYMKNN 757
+HPN+V+L+ C +L LV+E++ +
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQD 104
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 683 KVGEGGFGSVYKGILSD------GTVIAVKQLSSKSRQGNR-EFVNEIGMISAQQHPNLV 735
++G+G FG VY+G D T +AVK ++ + R EF+NE ++ ++V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 736 KLYGCCVEGNQLLLVYEYMKNNCL 759
+L G +G L+V E M + L
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDL 107
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
Query: 674 ATNNFDPANKVGEGGFGSVYKGILSDGT-VIAVKQL--SSKSRQG-NREFVNEIGMISAQ 729
A +F+ +G+G FG+VY ++A+K L + + G + E+ + S
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATF 778
+HPN+++LYG + ++ L+ EY + R + KL F AT+
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATY 116
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 38.1 bits (87), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 682 NKVGEGGFGSVYKGILSD------GTVIAVKQLSSKSRQGNR-EFVNEIGMISAQQHPNL 734
++G+G FG VY+G D T +AVK ++ + R EF+NE ++ ++
Sbjct: 22 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 81
Query: 735 VKLYGCCVEGNQLLLVYEYMKNNCL 759
V+L G +G L+V E M + L
Sbjct: 82 VRLLGVVSKGQPTLVVMELMAHGDL 106
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 38.1 bits (87), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 683 KVGEGGFGSVYKGILSD------GTVIAVKQLSSKSRQGNR-EFVNEIGMISAQQHPNLV 735
++G+G FG VY+G D T +AVK ++ + R EF+NE ++ ++V
Sbjct: 25 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 84
Query: 736 KLYGCCVEGNQLLLVYEYMKNNCL 759
+L G +G L+V E M + L
Sbjct: 85 RLLGVVSKGQPTLVVMELMAHGDL 108
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 677 NFDPANKVGEGGFGSVYKGI-LSDGTVIAVKQLSSKSRQGNREFV-NEIGMISAQQHPNL 734
+F+P +G GGFG V++ D A+K++ +R+ RE V E+ ++ +HP +
Sbjct: 7 DFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI 66
Query: 735 VKLYGCCVE 743
V+ + +E
Sbjct: 67 VRYFNAWLE 75
>pdb|3ZYO|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
And Immunoglobulin Domain Of Netrin-G Ligand-3
Length = 411
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 101/220 (45%), Gaps = 26/220 (11%)
Query: 184 RKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQ 243
+ L +L+ L LS N L +LN L + DN + + K+++L ++
Sbjct: 56 KHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLR 115
Query: 244 GSSLEGPIPASISALTSLTDLRISDLKG----SESAFPKLDKMNLKTLILTKCLIHGEIP 299
+ +E + + + SL L + +LK SE+AF L +NL+ L L C + +IP
Sbjct: 116 NNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGL--VNLRYLNLGMCNL-KDIP 172
Query: 300 DYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIFNSNKNVD- 358
+ + +L+ ++LS N L P +F+ L ++L ++ + + F+ K+++
Sbjct: 173 NLTA-LVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQV-ATIERNAFDDLKSLEE 230
Query: 359 --ISLNNFTWESSDPIECPRGSVNLVESYSSPRNKLDKVH 396
+S NN ++L +P ++L++VH
Sbjct: 231 LNLSHNNL--------------MSLPHDLFTPLHRLERVH 256
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 674 ATNNFDPANKVGEGGFGSVYKGILSDGT-VIAVKQL--SSKSRQG-NREFVNEIGMISAQ 729
A +F+ +G+G FG+VY ++A+K L + + G + E+ + S
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEY 753
+HPN+++LYG + ++ L+ EY
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEY 94
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 674 ATNNFDPANKVGEGGFGSVYKGILSDGT-VIAVKQL--SSKSRQG-NREFVNEIGMISAQ 729
A +F+ +G+G FG+VY ++A+K L + + G + E+ + S
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEY 753
+HPN+++LYG + ++ L+ EY
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEY 94
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 49/112 (43%), Gaps = 9/112 (8%)
Query: 682 NKVGEGGFGSVYKGILSDGTVI--AVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYG 739
N +G G +G V K + GT I A K++ + F EI ++ + HPN+++LY
Sbjct: 15 NTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYE 73
Query: 740 CCVEGNQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAA 791
+ + LV E C +F R+ H ++ I ++SA
Sbjct: 74 TFEDNTDIYLVMEL----CTGGELFE--RVVHKRVFRESDAARIMKDVLSAV 119
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 37.7 bits (86), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 49/112 (43%), Gaps = 9/112 (8%)
Query: 682 NKVGEGGFGSVYKGILSDGTVI--AVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYG 739
N +G G +G V K + GT I A K++ + F EI ++ + HPN+++LY
Sbjct: 32 NTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYE 90
Query: 740 CCVEGNQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAA 791
+ + LV E C +F R+ H ++ I ++SA
Sbjct: 91 TFEDNTDIYLVMEL----CTGGELFE--RVVHKRVFRESDAARIMKDVLSAV 136
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 11/85 (12%)
Query: 684 VGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNE--IGMISAQQHPNLVKLY--- 738
+G G +G+VYKG L D +AVK S +RQ F+NE I + +H N+ +
Sbjct: 21 IGRGRYGAVYKGSL-DERPVAVKVFSFANRQN---FINEKNIYRVPLMEHDNIARFIVGD 76
Query: 739 -GCCVEGN-QLLLVYEYMKNNCLSR 761
+G + LLV EY N L +
Sbjct: 77 ERVTADGRMEYLLVMEYYPNGSLXK 101
>pdb|1P8T|A Chain A, Crystal Structure Of Nogo-66 Receptor
Length = 285
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 59/134 (44%), Gaps = 8/134 (5%)
Query: 141 LVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFT 200
L L + GNR+S + + +L L + N P R L L L L +N+ +
Sbjct: 154 LTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLS 213
Query: 201 GELPAE-LTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGP--IPASISA 257
LP E L L L LR++DN + W +QK +GSS E P +P ++
Sbjct: 214 A-LPTEALAPLRALQYLRLNDNPWVCDC-RARPLWAWLQK--FRGSSSEVPCSLPQRLAG 269
Query: 258 LTSLTDLRISDLKG 271
L L +DL+G
Sbjct: 270 -RDLKRLAANDLQG 282
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Query: 682 NKVGEGGFGSV--YKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYG 739
K+GEGGF V +G L DG A+K++ +Q E E M HPN+++L
Sbjct: 35 QKLGEGGFSYVDLVEG-LHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVA 93
Query: 740 CCV 742
C+
Sbjct: 94 YCL 96
>pdb|1OZN|A Chain A, 1.5a Crystal Structure Of The Nogo Receptor Ligand Binding
Domain Reveals A Convergent Recognition Scaffold
Mediating Inhibition Of Myelination
Length = 285
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 59/134 (44%), Gaps = 8/134 (5%)
Query: 141 LVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFT 200
L L + GNR+S + + +L L + N P R L L L L +N+ +
Sbjct: 155 LTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLS 214
Query: 201 GELPAE-LTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGP--IPASISA 257
LP E L L L LR++DN + W +QK +GSS E P +P ++
Sbjct: 215 A-LPTEALAPLRALQYLRLNDNPWVCDC-RARPLWAWLQK--FRGSSSEVPCSLPQRLAG 270
Query: 258 LTSLTDLRISDLKG 271
L L +DL+G
Sbjct: 271 -RDLKRLAANDLQG 283
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 678 FDPANKVGEGGFGSVYKGILSD-GTVIAVKQLS-SKSRQGNREFVNEIGMISAQQHPNLV 735
F +++G+G FG VYKGI + V+A+K + ++ + EI ++S P +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 736 KLYGCCVEGNQLLLVYEYM 754
+ +G ++ +L ++ EY+
Sbjct: 81 RYFGSYLKSTKLWIIMEYL 99
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 37.4 bits (85), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 678 FDPANKVGEGGFGSVYKGILS-DGTVIAVKQLS-SKSRQGNREFVNEIGMISAQQHPNLV 735
F K+G+G FG V+KGI + V+A+K + ++ + EI ++S P +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 736 KLYGCCVEGNQLLLVYEYM 754
K YG ++ +L ++ EY+
Sbjct: 69 KYYGSYLKDTKLWIIMEYL 87
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Query: 684 VGEGGFGSVYKGILS----DGTVIAVKQLSSKSRQGNRE-FVNEIGMISAQQHPNLVKLY 738
+GEG FG VY+G+ + + +AVK N+E F++E ++ HP++VKL
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 75
Query: 739 G 739
G
Sbjct: 76 G 76
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 678 FDPANKVGEGGFGSVYKGILSD-GTVIAVKQLS-SKSRQGNREFVNEIGMISAQQHPNLV 735
F K+G+G FG V+KGI + V+A+K + ++ + EI ++S P +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 736 KLYGCCVEGNQLLLVYEYM 754
K YG ++ +L ++ EY+
Sbjct: 69 KYYGSYLKDTKLWIIMEYL 87
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Query: 684 VGEGGFGSVYKGILS----DGTVIAVKQLSSKSRQGNRE-FVNEIGMISAQQHPNLVKLY 738
+GEG FG VY+G+ + + +AVK N+E F++E ++ HP++VKL
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 91
Query: 739 G 739
G
Sbjct: 92 G 92
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 37.0 bits (84), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 18/83 (21%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 681 ANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGC 740
+ ++G G FG+VYKG + + ++ + + + F NE+ ++ +H N++ G
Sbjct: 41 STRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGY 100
Query: 741 CVEGNQLLLVYEYMKNNCLSRAI 763
+ N L +V ++ + + L + +
Sbjct: 101 MTKDN-LAIVTQWCEGSSLYKHL 122
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 37.0 bits (84), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Query: 684 VGEGGFGSVYKGILS----DGTVIAVKQLSSKSRQGNRE-FVNEIGMISAQQHPNLVKLY 738
+GEG FG VY+G+ + + +AVK N+E F++E ++ HP++VKL
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 79
Query: 739 G 739
G
Sbjct: 80 G 80
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 37.0 bits (84), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 678 FDPANKVGEGGFGSVYKGILS-DGTVIAVKQLS-SKSRQGNREFVNEIGMISAQQHPNLV 735
F K+G+G FG V+KGI + V+A+K + ++ + EI ++S P +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 736 KLYGCCVEGNQLLLVYEYM 754
K YG ++ +L ++ EY+
Sbjct: 89 KYYGSYLKDTKLWIIMEYL 107
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 36.6 bits (83), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 7/77 (9%)
Query: 684 VGEGGFGSVYKGI-LSDGTVI----AVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKL 737
+G G FG+V+KG+ + +G I +K + KS RQ + + + I + H ++V+L
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 98
Query: 738 YGCCVEGNQLLLVYEYM 754
G C G+ L LV +Y+
Sbjct: 99 LGLC-PGSSLQLVTQYL 114
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 36.6 bits (83), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Query: 682 NKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCC 741
K+G G FG V+ + T +AVK + S F+ E ++ QH LVKL+
Sbjct: 21 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHA-V 78
Query: 742 VEGNQLLLVYEYMKNNCL 759
V + ++ E+M L
Sbjct: 79 VTKEPIYIITEFMAKGSL 96
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 36.6 bits (83), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Query: 647 GGKVSADKELRGLDLQTGLYTLRQ--IKAATNNFDPANKVGEGGFGSVYKGILSD-GTVI 703
G KVS DK+ G + T + T Q + ++ +G G FG VY+ L D G ++
Sbjct: 3 GSKVSRDKD--GSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELV 60
Query: 704 AVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKL 737
A+K++ R NR E+ ++ H N+V+L
Sbjct: 61 AIKKVLQDKRFKNR----ELQIMRKLDHCNIVRL 90
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 36.6 bits (83), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 676 NNFDPANKVGEGGFGSVYKGILSDGT-VIAVKQL--SSKSRQG-NREFVNEIGMISAQQH 731
++F+ +G+G FG+VY ++A+K L S ++G + EI + + H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 732 PNLVKLYGCCVEGNQLLLVYEY 753
PN+++LY + ++ L+ EY
Sbjct: 83 PNILRLYNYFYDRRRIYLILEY 104
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 36.6 bits (83), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 7/77 (9%)
Query: 684 VGEGGFGSVYKGI-LSDGTVI----AVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKL 737
+G G FG+V+KG+ + +G I +K + KS RQ + + + I + H ++V+L
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 80
Query: 738 YGCCVEGNQLLLVYEYM 754
G C G+ L LV +Y+
Sbjct: 81 LGLC-PGSSLQLVTQYL 96
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 36.2 bits (82), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 14/92 (15%)
Query: 684 VGEGGFGSVYKGIL----SDGTVIAVKQLSSKSRQGNRE-FVNEIGMISAQQHPNLVKLY 738
+GEG FG V++GI + +A+K + + RE F+ E + HP++VKL
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 739 GCCVEGNQLLLVYEYMKNNCLSRAIFGKLRIF 770
G E N + ++ E G+LR F
Sbjct: 78 GVITE-NPVWIIMEL--------CTLGELRSF 100
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 36.2 bits (82), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 10/80 (12%)
Query: 684 VGEGGFGSVYK----GILSD----GTVIAVKQLSSKSRQGN-REFVNEIGMISA-QQHPN 733
+GEG FG V GI D +AVK L + + + + V+E+ M+ +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 734 LVKLYGCCVEGNQLLLVYEY 753
++ L G C + L ++ EY
Sbjct: 103 IINLLGACTQDGPLYVIVEY 122
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 36.2 bits (82), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Query: 682 NKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCC 741
K+G G FG V+ + T +AVK + S F+ E ++ QH LVKL+
Sbjct: 188 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHA-V 245
Query: 742 VEGNQLLLVYEYMKNNCL 759
V + ++ E+M L
Sbjct: 246 VTKEPIYIITEFMAKGSL 263
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 36.2 bits (82), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 14/92 (15%)
Query: 684 VGEGGFGSVYKGIL----SDGTVIAVKQLSSKSRQGNRE-FVNEIGMISAQQHPNLVKLY 738
+GEG FG V++GI + +A+K + + RE F+ E + HP++VKL
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 739 GCCVEGNQLLLVYEYMKNNCLSRAIFGKLRIF 770
G E N + ++ E G+LR F
Sbjct: 78 GVITE-NPVWIIMEL--------CTLGELRSF 100
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 36.2 bits (82), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 14/92 (15%)
Query: 684 VGEGGFGSVYKGIL----SDGTVIAVKQLSSKSRQGNRE-FVNEIGMISAQQHPNLVKLY 738
+GEG FG V++GI + +A+K + + RE F+ E + HP++VKL
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 739 GCCVEGNQLLLVYEYMKNNCLSRAIFGKLRIF 770
G E N + ++ E G+LR F
Sbjct: 78 GVITE-NPVWIIMEL--------CTLGELRSF 100
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 35.8 bits (81), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Query: 682 NKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCC 741
K+G G FG V+ + T +AVK + S F+ E ++ QH LVKL+
Sbjct: 194 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLH-AV 251
Query: 742 VEGNQLLLVYEYMKNNCL 759
V + ++ E+M L
Sbjct: 252 VTKEPIYIITEFMAKGSL 269
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 35.8 bits (81), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 10/80 (12%)
Query: 684 VGEGGFGSVYK----GILSD----GTVIAVKQLSSKSRQGN-REFVNEIGMISA-QQHPN 733
+GEG FG V GI D +AVK L + + + + V+E+ M+ +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 734 LVKLYGCCVEGNQLLLVYEY 753
++ L G C + L ++ EY
Sbjct: 103 IINLLGACTQDGPLYVIVEY 122
>pdb|4FCG|A Chain A, Structure Of The Leucine-Rich Repeat Domain Of The Type
Iii Effector Xcv3220 (Xopl)
Length = 328
Score = 35.8 bits (81), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 72/172 (41%), Gaps = 19/172 (11%)
Query: 155 FPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTK----- 209
P L+ L++ N ++P I L L++L + + ELP L
Sbjct: 119 LPDTXQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASG 177
Query: 210 ----LTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLR 265
L NL LR+ +P I + ++ L I+ S L PA I L L +L
Sbjct: 178 EHQGLVNLQSLRLEWTGIRS-LPASIANLQNLKSLKIRNSPLSALGPA-IHHLPKLEEL- 234
Query: 266 ISDLKGSESA--FPKL--DKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDL 313
DL+G + +P + + LK LIL C +P I +T+L+ +DL
Sbjct: 235 --DLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDL 284
Score = 30.4 bits (67), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 6/107 (5%)
Query: 107 TLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTL 165
+LP ++ L+ LK L + RN + P L +L EL + G +P + L
Sbjct: 197 SLPASIANLQNLKSLKI-RNSPLSALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPL 255
Query: 166 KNLSIE--GNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKL 210
K L ++ NL T +P DI +L L+KL L LP+ + +L
Sbjct: 256 KRLILKDCSNLLT--LPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQL 300
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 35.8 bits (81), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
Query: 676 NNFDPANKVGEGGFGSV-----YKGILSDGTV-IAVKQLSSKSRQGNRE-FVNEIGMIS- 727
N +G G FG V Y I SD + +AVK L + RE ++E+ ++S
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82
Query: 728 AQQHPNLVKLYGCCVEGNQLLLVYEY 753
H N+V L G C G L++ EY
Sbjct: 83 LGNHMNIVNLLGACTIGGPTLVITEY 108
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 35.8 bits (81), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 10/80 (12%)
Query: 684 VGEGGFGSVYK----GILSD----GTVIAVKQLSSKSRQGN-REFVNEIGMISA-QQHPN 733
+GEG FG V GI D +AVK L + + + + V+E+ M+ +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 734 LVKLYGCCVEGNQLLLVYEY 753
++ L G C + L ++ EY
Sbjct: 103 IIHLLGACTQDGPLYVIVEY 122
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 35.8 bits (81), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 14/92 (15%)
Query: 684 VGEGGFGSVYKGIL----SDGTVIAVKQLSSKSRQGNRE-FVNEIGMISAQQHPNLVKLY 738
+GEG FG V++GI + +A+K + + RE F+ E + HP++VKL
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 739 GCCVEGNQLLLVYEYMKNNCLSRAIFGKLRIF 770
G E N + ++ E G+LR F
Sbjct: 458 GVITE-NPVWIIMEL--------CTLGELRSF 480
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 35.8 bits (81), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 14/92 (15%)
Query: 684 VGEGGFGSVYKGIL----SDGTVIAVKQLSSKSRQGNRE-FVNEIGMISAQQHPNLVKLY 738
+GEG FG V++GI + +A+K + + RE F+ E + HP++VKL
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 739 GCCVEGNQLLLVYEYMKNNCLSRAIFGKLRIF 770
G E N + ++ E G+LR F
Sbjct: 458 GVITE-NPVWIIMEL--------CTLGELRSF 480
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 35.8 bits (81), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 10/80 (12%)
Query: 684 VGEGGFGSVYK----GILSD----GTVIAVKQLSSKSRQGN-REFVNEIGMISA-QQHPN 733
+GEG FG V GI D +AVK L + + + + V+E+ M+ +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 734 LVKLYGCCVEGNQLLLVYEY 753
++ L G C + L ++ EY
Sbjct: 103 IINLLGACTQDGPLYVIVEY 122
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 35.8 bits (81), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 10/80 (12%)
Query: 684 VGEGGFGSVYK----GILSD----GTVIAVKQLSSKSRQGN-REFVNEIGMISA-QQHPN 733
+GEG FG V GI D +AVK L + + + + V+E+ M+ +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 734 LVKLYGCCVEGNQLLLVYEY 753
++ L G C + L ++ EY
Sbjct: 103 IINLLGACTQDGPLYVIVEY 122
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 35.8 bits (81), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 10/80 (12%)
Query: 684 VGEGGFGSVYK----GILSD----GTVIAVKQLSSKSRQGN-REFVNEIGMISA-QQHPN 733
+GEG FG V GI D +AVK L + + + + V+E+ M+ +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 734 LVKLYGCCVEGNQLLLVYEY 753
++ L G C + L ++ EY
Sbjct: 103 IITLLGACTQDGPLYVIVEY 122
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 35.8 bits (81), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 49/112 (43%), Gaps = 13/112 (11%)
Query: 650 VSADKELRGLDLQTGLYTLRQIKAATNNFDPANKVGEGGFGSVYKGI-LSDGTVIAVKQL 708
+++D R LD + L LR F+ VG G +G VYKG + G + A+K +
Sbjct: 2 MASDSPARSLD-EIDLSALRD---PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVM 57
Query: 709 SSKSRQGNREFVNEIGMISA-QQHPNLVKLYGCCVEGN------QLLLVYEY 753
+ E EI M+ H N+ YG ++ N QL LV E+
Sbjct: 58 DVTGDE-EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEF 108
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 10/80 (12%)
Query: 684 VGEGGFGSVYK----GILSD----GTVIAVKQLSSKSRQGN-REFVNEIGMISA-QQHPN 733
+GEG FG V GI D +AVK L + + + + V+E+ M+ +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 734 LVKLYGCCVEGNQLLLVYEY 753
++ L G C + L ++ EY
Sbjct: 103 IINLLGACTQDGPLYVIVEY 122
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 14/92 (15%)
Query: 684 VGEGGFGSVYKGIL----SDGTVIAVKQLSSKSRQGNRE-FVNEIGMISAQQHPNLVKLY 738
+GEG FG V++GI + +A+K + + RE F+ E + HP++VKL
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 739 GCCVEGNQLLLVYEYMKNNCLSRAIFGKLRIF 770
G E N + ++ E G+LR F
Sbjct: 78 GVITE-NPVWIIMEL--------CTLGELRSF 100
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
Query: 676 NNFDPANKVGEGGFGSV-----YKGILSDGTV-IAVKQLSSKSRQGNRE-FVNEIGMIS- 727
N +G G FG V Y I SD + +AVK L + RE ++E+ ++S
Sbjct: 39 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 98
Query: 728 AQQHPNLVKLYGCCVEGNQLLLVYEY 753
H N+V L G C G L++ EY
Sbjct: 99 LGNHMNIVNLLGACTIGGPTLVITEY 124
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 678 FDPANKVGEGGFGSVYKGI-LSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVK 736
+D ++G G FG V++ + + G V K +++ NEI +++ HP L+
Sbjct: 53 YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLIN 112
Query: 737 LYGCCVEGNQLLLVYEYM 754
L+ + +++L+ E++
Sbjct: 113 LHDAFEDKYEMVLILEFL 130
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
Query: 676 NNFDPANKVGEGGFGSV-----YKGILSDGTV-IAVKQLSSKSRQGNRE-FVNEIGMIS- 727
N +G G FG V Y I SD + +AVK L + RE ++E+ ++S
Sbjct: 41 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 100
Query: 728 AQQHPNLVKLYGCCVEGNQLLLVYEY 753
H N+V L G C G L++ EY
Sbjct: 101 LGNHMNIVNLLGACTIGGPTLVITEY 126
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 678 FDPANKVGEGGFGSVYKGILS-DGTVIAVKQLS-SKSRQGNREFVNEIGMISAQQHPNLV 735
F ++G+G FG V+KGI + V+A+K + ++ + EI ++S +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 736 KLYGCCVEGNQLLLVYEYM 754
K YG ++G++L ++ EY+
Sbjct: 85 KYYGSYLKGSKLWIIMEYL 103
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 14/92 (15%)
Query: 684 VGEGGFGSVYKGIL----SDGTVIAVKQLSSKSRQGNRE-FVNEIGMISAQQHPNLVKLY 738
+GEG FG V++GI + +A+K + + RE F+ E + HP++VKL
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 739 GCCVEGNQLLLVYEYMKNNCLSRAIFGKLRIF 770
G E N + ++ E G+LR F
Sbjct: 106 GVITE-NPVWIIMEL--------CTLGELRSF 128
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
Query: 676 NNFDPANKVGEGGFGSV-----YKGILSDGTV-IAVKQLSSKSRQGNRE-FVNEIGMISA 728
N +G G FG V Y I SD + +AVK L + RE ++E+ ++S
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 729 -QQHPNLVKLYGCCVEGNQLLLVYEY 753
H N+V L G C G L++ EY
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEY 131
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
Query: 676 NNFDPANKVGEGGFGSV-----YKGILSDGTV-IAVKQLSSKSRQGNRE-FVNEIGMISA 728
N +G G FG V Y I SD + +AVK L + RE ++E+ ++S
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 729 -QQHPNLVKLYGCCVEGNQLLLVYEY 753
H N+V L G C G L++ EY
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEY 131
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 10/80 (12%)
Query: 684 VGEGGFGSVYK----GILSDG----TVIAVKQLSSKSRQGN-REFVNEIGMISA-QQHPN 733
+GEG FG V G+ D T +AVK L S + + + + ++E+ M+ +H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 734 LVKLYGCCVEGNQLLLVYEY 753
++ L G C + L ++ EY
Sbjct: 96 IINLLGACTQDGPLYVIVEY 115
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 14/92 (15%)
Query: 684 VGEGGFGSVYKGIL----SDGTVIAVKQLSSKSRQGNRE-FVNEIGMISAQQHPNLVKLY 738
+GEG FG V++GI + +A+K + + RE F+ E + HP++VKL
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 739 GCCVEGNQLLLVYEYMKNNCLSRAIFGKLRIF 770
G E N + ++ E G+LR F
Sbjct: 75 GVITE-NPVWIIMEL--------CTLGELRSF 97
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 14/92 (15%)
Query: 684 VGEGGFGSVYKGIL----SDGTVIAVKQLSSKSRQGNRE-FVNEIGMISAQQHPNLVKLY 738
+GEG FG V++GI + +A+K + + RE F+ E + HP++VKL
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 739 GCCVEGNQLLLVYEYMKNNCLSRAIFGKLRIF 770
G E N + ++ E G+LR F
Sbjct: 80 GVITE-NPVWIIMEL--------CTLGELRSF 102
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 14/92 (15%)
Query: 684 VGEGGFGSVYKGIL----SDGTVIAVKQLSSKSRQGNRE-FVNEIGMISAQQHPNLVKLY 738
+GEG FG V++GI + +A+K + + RE F+ E + HP++VKL
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 739 GCCVEGNQLLLVYEYMKNNCLSRAIFGKLRIF 770
G E N + ++ E G+LR F
Sbjct: 81 GVITE-NPVWIIMEL--------CTLGELRSF 103
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 14/92 (15%)
Query: 684 VGEGGFGSVYKGIL----SDGTVIAVKQLSSKSRQGNRE-FVNEIGMISAQQHPNLVKLY 738
+GEG FG V++GI + +A+K + + RE F+ E + HP++VKL
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 739 GCCVEGNQLLLVYEYMKNNCLSRAIFGKLRIF 770
G E N + ++ E G+LR F
Sbjct: 83 GVITE-NPVWIIMEL--------CTLGELRSF 105
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 676 NNFDPANKVGEGGFGSVYKGILSD-GTVIAVKQ--LSSKSRQGNREFVNEIGMISAQQHP 732
++ K+GEG +G+V+K + ++A+K+ L + EI ++ +H
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 733 NLVKLYGCCVEGNQLLLVYEYMKNN 757
N+V+L+ +L LV+E+ +
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEFCDQD 86
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/125 (21%), Positives = 52/125 (41%), Gaps = 14/125 (11%)
Query: 656 LRGLDLQTGLYTLRQIKAATNNFDPANKVGEGGFGSVY----KGILSDGTVIAVKQLS-S 710
+G+ + G+Y ++ ++ K+G G +G V K S+ + +K+
Sbjct: 16 FQGIAINPGMYVRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFD 75
Query: 711 KSRQGN---------REFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYMKNNCLSR 761
K R + E NEI ++ + HPN++KL+ + LV E+ + L
Sbjct: 76 KGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFE 135
Query: 762 AIFGK 766
I +
Sbjct: 136 QIINR 140
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 9/98 (9%)
Query: 675 TNNFDPANKVGEGGFGSVYK------GILSDGTVIAVKQLSSKSRQGNREFVNEIGMISA 728
++N+D ++G+G F V + G+ +I K+LS++ Q + E +
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ---KLEREARICRK 61
Query: 729 QQHPNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFGK 766
QHPN+V+L+ E + LV++ + L I +
Sbjct: 62 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR 99
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Query: 673 AATNNFDPANKVGEGGFGSVYK-GILSDGTVIAVKQLS--SKSRQGNREFVNEIGMISAQ 729
+ +++ +G G +G K SDG ++ K+L S + + V+E+ ++
Sbjct: 3 SRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL 62
Query: 730 QHPNLVKLYGCCVE--GNQLLLVYEYMKNNCLSRAI 763
+HPN+V+ Y ++ L +V EY + L+ I
Sbjct: 63 KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVI 98
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 9/98 (9%)
Query: 675 TNNFDPANKVGEGGFGSVYK------GILSDGTVIAVKQLSSKSRQGNREFVNEIGMISA 728
++N+D ++G+G F V + G+ +I K+LS++ Q + E +
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ---KLEREARICRK 61
Query: 729 QQHPNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFGK 766
QHPN+V+L+ E + LV++ + L I +
Sbjct: 62 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR 99
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 9/98 (9%)
Query: 675 TNNFDPANKVGEGGFGSVYK------GILSDGTVIAVKQLSSKSRQGNREFVNEIGMISA 728
++N+D ++G+G F V + G+ +I K+LS++ Q + E +
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ---KLEREARICRK 60
Query: 729 QQHPNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFGK 766
QHPN+V+L+ E + LV++ + L I +
Sbjct: 61 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR 98
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Query: 684 VGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKL 737
+G G FG V++ L + +A+K++ R NR E+ ++ +HPN+V L
Sbjct: 48 IGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNR----ELQIMRIVKHPNVVDL 97
>pdb|2V9T|B Chain B, Complex Between The Second Lrr Domain Of Slit2 And The
First Ig Domain From Robo1
Length = 220
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 5/100 (5%)
Query: 252 PASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNI 311
PA+ + ++ D R L + P+ + + L + I P KL+ I
Sbjct: 6 PAACTCSNNIVDCRGKGLTEIPTNLPE----TITEIRLEQNTIKVIPPGAFSPYKKLRRI 61
Query: 312 DLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIF 351
DLS N ++ P F+ L N + L GNK+T +PK +F
Sbjct: 62 DLSNNQISELAPDAFQGLRSLNSLVLYGNKITE-LPKSLF 100
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 16/83 (19%)
Query: 684 VGEGGFGSVYKGILSDG-----------TVIAVKQLSSKSRQGN-REFVNEIGMISA-QQ 730
+GEG FG V +L++ T +AVK L S + + + + ++E+ M+ +
Sbjct: 36 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 731 HPNLVKLYGCCVEGNQLLLVYEY 753
H N++ L G C + L ++ EY
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEY 115
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 10/80 (12%)
Query: 684 VGEGGFGSVYK----GILSD----GTVIAVKQLSSKSRQGN-REFVNEIGMISA-QQHPN 733
+GEG FG V GI D +AVK L + + + + V+E+ M+ +H N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 734 LVKLYGCCVEGNQLLLVYEY 753
++ L G C + L ++ EY
Sbjct: 149 IINLLGACTQDGPLYVIVEY 168
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Query: 673 AATNNFDPANKVGEGGFGSVYK-GILSDGTVIAVKQLS--SKSRQGNREFVNEIGMISAQ 729
+ +++ +G G +G K SDG ++ K+L S + + V+E+ ++
Sbjct: 3 SRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL 62
Query: 730 QHPNLVKLYGCCVE--GNQLLLVYEYMKNNCLSRAI 763
+HPN+V+ Y ++ L +V EY + L+ I
Sbjct: 63 KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVI 98
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 676 NNFDPANKVGEGGFGSVYKGILSD-GTVIAVKQ--LSSKSRQGNREFVNEIGMISAQQHP 732
++ K+GEG +G+V+K + ++A+K+ L + EI ++ +H
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 733 NLVKLYGCCVEGNQLLLVYEYMKNN 757
N+V+L+ +L LV+E+ +
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEFCDQD 86
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 16/83 (19%)
Query: 684 VGEGGFGSVYKGILSDG-----------TVIAVKQLSSKSRQGN-REFVNEIGMISA-QQ 730
+GEG FG V +L++ T +AVK L S + + + + ++E+ M+ +
Sbjct: 25 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 81
Query: 731 HPNLVKLYGCCVEGNQLLLVYEY 753
H N++ L G C + L ++ EY
Sbjct: 82 HKNIINLLGACTQDGPLYVIVEY 104
>pdb|2V9S|A Chain A, Second Lrr Domain Of Human Slit2
pdb|2V9S|B Chain B, Second Lrr Domain Of Human Slit2
pdb|2V9S|C Chain C, Second Lrr Domain Of Human Slit2
pdb|2V9S|D Chain D, Second Lrr Domain Of Human Slit2
Length = 220
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 5/100 (5%)
Query: 252 PASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNI 311
PA+ + ++ D R L + P+ + + L + I P KL+ I
Sbjct: 6 PAACTCSNNIVDCRGKGLTEIPTNLPE----TITEIRLEQNTIKVIPPGAFSPYKKLRRI 61
Query: 312 DLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIF 351
DLS N ++ P F+ L N + L GNK+T +PK +F
Sbjct: 62 DLSNNQISELAPDAFQGLRSLNSLVLYGNKITE-LPKSLF 100
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Query: 673 AATNNFDPANKVGEGGFGSVYK-GILSDGTVIAVKQLS--SKSRQGNREFVNEIGMISAQ 729
+ +++ +G G +G K SDG ++ K+L S + + V+E+ ++
Sbjct: 3 SRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL 62
Query: 730 QHPNLVKLYGCCVE--GNQLLLVYEYMKNNCLSRAI 763
+HPN+V+ Y ++ L +V EY + L+ I
Sbjct: 63 KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVI 98
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 11/84 (13%)
Query: 677 NFDPANKVGEGGFGSV--YKGILSDGTVIAVK-----QLSSKSRQGNREFVNEIGMISAQ 729
N+ +G+G F V + IL+ G +AVK QL+S S Q + E+ ++
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQ---KLFREVRIMKVL 63
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEY 753
HPN+VKL+ L LV EY
Sbjct: 64 NHPNIVKLFEVIETEKTLYLVMEY 87
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Query: 684 VGEGGFGSVYKGILSD-GTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKL 737
+G G FG VY+ L D G ++A+K++ R NR E+ ++ H N+V+L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRL 78
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 16/83 (19%)
Query: 684 VGEGGFGSVYKGILSDG-----------TVIAVKQLSSKSRQGN-REFVNEIGMISA-QQ 730
+GEG FG V +L++ T +AVK L S + + + + ++E+ M+ +
Sbjct: 21 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 77
Query: 731 HPNLVKLYGCCVEGNQLLLVYEY 753
H N++ L G C + L ++ EY
Sbjct: 78 HKNIINLLGACTQDGPLYVIVEY 100
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 16/83 (19%)
Query: 684 VGEGGFGSVYKGILSDG-----------TVIAVKQLSSKSRQGN-REFVNEIGMISA-QQ 730
+GEG FG V +L++ T +AVK L S + + + + ++E+ M+ +
Sbjct: 29 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 85
Query: 731 HPNLVKLYGCCVEGNQLLLVYEY 753
H N++ L G C + L ++ EY
Sbjct: 86 HKNIINLLGACTQDGPLYVIVEY 108
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 16/83 (19%)
Query: 684 VGEGGFGSVYKGILSDG-----------TVIAVKQLSSKSRQGN-REFVNEIGMISA-QQ 730
+GEG FG V +L++ T +AVK L S + + + + ++E+ M+ +
Sbjct: 36 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 731 HPNLVKLYGCCVEGNQLLLVYEY 753
H N++ L G C + L ++ EY
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEY 115
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 50/126 (39%), Gaps = 5/126 (3%)
Query: 660 DLQT--GLYTLRQIKAATNNFDPANKVGEGGFGSVY---KGILSDGTVIAVKQLSSKSRQ 714
DLQ G++ + + + K+G G +G V + I + + +S S
Sbjct: 19 DLQATPGMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTS 78
Query: 715 GNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFGKLRIFHISI 774
N + + E+ ++ HPN++KLY + LV E K L I +++ +
Sbjct: 79 SNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDA 138
Query: 775 YATFPQ 780
Q
Sbjct: 139 AVIIKQ 144
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 16/83 (19%)
Query: 684 VGEGGFGSVYKGILSDG-----------TVIAVKQLSSKSRQGN-REFVNEIGMISA-QQ 730
+GEG FG V +L++ T +AVK L S + + + + ++E+ M+ +
Sbjct: 28 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 84
Query: 731 HPNLVKLYGCCVEGNQLLLVYEY 753
H N++ L G C + L ++ EY
Sbjct: 85 HKNIINLLGACTQDGPLYVIVEY 107
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 16/83 (19%)
Query: 684 VGEGGFGSVYKGILSDG-----------TVIAVKQLSSKSRQGN-REFVNEIGMISA-QQ 730
+GEG FG V +L++ T +AVK L S + + + + ++E+ M+ +
Sbjct: 36 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 731 HPNLVKLYGCCVEGNQLLLVYEY 753
H N++ L G C + L ++ EY
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEY 115
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Query: 684 VGEGGFGSVYKGILSD-GTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKL 737
+G G FG VY+ L D G ++A+K++ R NR E+ ++ H N+V+L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRL 78
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Query: 684 VGEGGFGSVYKGILSD-GTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKL 737
+G G FG VY+ L D G ++A+K++ R NR E+ ++ H N+V+L
Sbjct: 29 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRL 79
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Query: 684 VGEGGFGSVYKGILSD-GTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKL 737
+G G FG VY+ L D G ++A+K++ R NR E+ ++ H N+V+L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRL 78
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 9/98 (9%)
Query: 675 TNNFDPANKVGEGGFGSVYK------GILSDGTVIAVKQLSSKSRQGNREFVNEIGMISA 728
++N+D ++G+G F V + G+ +I K+LS++ Q + E +
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ---KLEREARICRK 84
Query: 729 QQHPNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFGK 766
QHPN+V+L+ E + LV++ + L I +
Sbjct: 85 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR 122
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 16/83 (19%)
Query: 684 VGEGGFGSVYKGILSDG-----------TVIAVKQLSSKSRQGN-REFVNEIGMISA-QQ 730
+GEG FG V +L++ T +AVK L S + + + + ++E+ M+ +
Sbjct: 77 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 133
Query: 731 HPNLVKLYGCCVEGNQLLLVYEY 753
H N++ L G C + L ++ EY
Sbjct: 134 HKNIINLLGACTQDGPLYVIVEY 156
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Query: 684 VGEGGFGSVYKGILSD-GTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKL 737
+G G FG VY+ L D G ++A+K++ R NR E+ ++ H N+V+L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRL 78
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 11/84 (13%)
Query: 677 NFDPANKVGEGGFGSV--YKGILSDGTVIAVK-----QLSSKSRQGNREFVNEIGMISAQ 729
N+ +G+G F V + IL+ G +AVK QL+S S Q + E+ ++
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQ---KLFREVRIMKVL 70
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEY 753
HPN+VKL+ L LV EY
Sbjct: 71 NHPNIVKLFEVIETEKTLYLVMEY 94
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 664 GLYTLRQIKAATNNFDPANKVGEGGFGSVYK------GILSDGTVIAVKQLSSKSRQGNR 717
G+ T RQ + ++++ ++G G F V K G I ++LSS R +R
Sbjct: 1 GMSTFRQ-EDVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSR 59
Query: 718 EFVN-EIGMISAQQHPNLVKLYGCCVEGNQLLLVYE 752
E + E+ ++ +HPN++ L+ ++L+ E
Sbjct: 60 EEIEREVNILREIRHPNIITLHDIFENKTDVVLILE 95
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 11/84 (13%)
Query: 677 NFDPANKVGEGGFGSV--YKGILSDGTVIAVK-----QLSSKSRQGNREFVNEIGMISAQ 729
N+ +G+G F V + IL+ G +AVK QL+S S Q + E+ ++
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQ---KLFREVRIMKVL 70
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEY 753
HPN+VKL+ L LV EY
Sbjct: 71 NHPNIVKLFEVIETEKTLYLVMEY 94
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 11/84 (13%)
Query: 677 NFDPANKVGEGGFGSV--YKGILSDGTVIAVK-----QLSSKSRQGNREFVNEIGMISAQ 729
N+ +G+G F V + IL+ G +AVK QL+S S Q + E+ ++
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQ---KLFREVRIMKVL 70
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEY 753
HPN+VKL+ L LV EY
Sbjct: 71 NHPNIVKLFEVIETEKTLYLVMEY 94
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Query: 684 VGEGGFGSVYKGILSD-GTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKL 737
+G G FG VY+ L D G ++A+K++ R NR E+ ++ H N+V+L
Sbjct: 41 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRL 91
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Query: 684 VGEGGFGSVYKGILSD-GTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKL 737
+G G FG VY+ L D G ++A+K++ R NR E+ ++ H N+V+L
Sbjct: 47 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRL 97
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 10/80 (12%)
Query: 684 VGEGGFGSVYK----GILSD----GTVIAVKQLSSKSRQGN-REFVNEIGMISA-QQHPN 733
+GEG FG V GI D +AVK L + + + + V+E+ M+ +H N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 734 LVKLYGCCVEGNQLLLVYEY 753
++ L G C + L ++ EY
Sbjct: 95 IINLLGACTQDGPLYVIVEY 114
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 10/80 (12%)
Query: 684 VGEGGFGSVYK----GILSD----GTVIAVKQLSSKSRQGN-REFVNEIGMISA-QQHPN 733
+GEG FG V GI D +AVK L + + + + V+E+ M+ +H N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 734 LVKLYGCCVEGNQLLLVYEY 753
++ L G C + L ++ EY
Sbjct: 90 IINLLGACTQDGPLYVIVEY 109
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Query: 684 VGEGGFGSVYKGILSD-GTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKL 737
+G G FG VY+ L D G ++A+K++ R NR E+ ++ H N+V+L
Sbjct: 36 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRL 86
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Query: 684 VGEGGFGSVYKGILSD-GTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKL 737
+G G FG VY+ L D G ++A+K++ R NR E+ ++ H N+V+L
Sbjct: 32 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRL 82
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Query: 684 VGEGGFGSVYKGILSD-GTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKL 737
+G G FG VY+ L D G ++A+K++ R NR E+ ++ H N+V+L
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRL 90
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 10/80 (12%)
Query: 684 VGEGGFGSVYK----GILSD----GTVIAVKQLSSKSRQGN-REFVNEIGMISA-QQHPN 733
+GEG FG V GI D +AVK L + + + + V+E+ M+ +H N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 734 LVKLYGCCVEGNQLLLVYEY 753
++ L G C + L ++ EY
Sbjct: 92 IINLLGACTQDGPLYVIVEY 111
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Query: 684 VGEGGFGSVYKGILSD-GTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKL 737
+G G FG VY+ L D G ++A+K++ R NR E+ ++ H N+V+L
Sbjct: 33 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRL 83
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Query: 684 VGEGGFGSVYKGI-LSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCV 742
+G+G +G VY G LS+ IA+K++ + + ++ EI + +H N+V+ G
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 75
Query: 743 EGNQLLLVYEYMKNNCLS---RAIFGKLR 768
E + + E + LS R+ +G L+
Sbjct: 76 ENGFIKIFMEQVPGGSLSALLRSKWGPLK 104
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Query: 684 VGEGGFGSVYKGILSD-GTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKL 737
+G G FG VY+ L D G ++A+K++ R NR E+ ++ H N+V+L
Sbjct: 56 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRL 106
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 6/86 (6%)
Query: 678 FDPANKVGEGGFGSVYKGI-LSDGTVIAVKQL---SSKSRQGNREFVNEIGMISAQQHPN 733
++ K+G+G +G V+K I G V+AVK++ S R F + + H N
Sbjct: 11 YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHEN 70
Query: 734 LVKLYGCCVEGN--QLLLVYEYMKNN 757
+V L N + LV++YM+ +
Sbjct: 71 IVNLLNVLRADNDRDVYLVFDYMETD 96
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Query: 684 VGEGGFGSVYKGI-LSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCV 742
+G+G +G VY G LS+ IA+K++ + + ++ EI + +H N+V+ G
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 743 EGNQLLLVYEYMKNNCLS---RAIFGKLR 768
E + + E + LS R+ +G L+
Sbjct: 90 ENGFIKIFMEQVPGGSLSALLRSKWGPLK 118
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 53/124 (42%), Gaps = 4/124 (3%)
Query: 144 LSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDI-RKLINLQKLILSSNSFTGE 202
L++ GN+L L +T L L + GN S+P + KL NL++L+L N
Sbjct: 68 LALGGNKLHDI--SALKELTNLTYLILTGNQLQ-SLPNGVFDKLTNLKELVLVENQLQSL 124
Query: 203 LPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLT 262
KLTNL L ++ N K + +L + + L+ LT L
Sbjct: 125 PDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLK 184
Query: 263 DLRI 266
DLR+
Sbjct: 185 DLRL 188
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 65/159 (40%), Gaps = 25/159 (15%)
Query: 183 IRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHI 242
+++L NL LIL+ N KLTNL +L + +N K + L++
Sbjct: 81 LKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNL 140
Query: 243 QGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYI 302
+ L+ LT+LT+L +S + +L + P+ +
Sbjct: 141 AHNQLQSLPKGVFDKLTNLTELDLS--------YNQLQSL----------------PEGV 176
Query: 303 GD-MTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGN 340
D +T+LK++ L N L F++L +++L N
Sbjct: 177 FDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDN 215
>pdb|2K46|A Chain A, Xenopus Laevis Malectin Complexed With Nigerose
(Glcalpha1- 3glc)
pdb|2KR2|A Chain A, Xenopus Laevis Malectin Complexed With Maltose
(Glcalpha1-4glc)
Length = 190
Score = 34.7 bits (78), Expect = 0.23, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 6/72 (8%)
Query: 484 DLELYRTARVSPLSLTYYGLCLGNGNYTVRLHFAEIIFKNDSTFNSLGKRIFDIYIQEKL 543
D LY+T R + S Y G Y + L FAE+ F +++FD+ +
Sbjct: 57 DQVLYQTERYNEDSFGYDIPIKEEGEYVLVLKFAEVYFAQSQ------QKVFDVRVNGHT 110
Query: 544 VKKDFNIEDEAG 555
V KD +I D G
Sbjct: 111 VVKDLDIFDRVG 122
>pdb|2JWP|A Chain A, Malectin
Length = 174
Score = 34.7 bits (78), Expect = 0.23, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 6/72 (8%)
Query: 484 DLELYRTARVSPLSLTYYGLCLGNGNYTVRLHFAEIIFKNDSTFNSLGKRIFDIYIQEKL 543
D LY+T R + S Y G Y + L FAE+ F +++FD+ +
Sbjct: 53 DQVLYQTERYNEDSFGYDIPIKEEGEYVLVLKFAEVYFAQSQ------QKVFDVRVNGHT 106
Query: 544 VKKDFNIEDEAG 555
V KD +I D G
Sbjct: 107 VVKDLDIFDRVG 118
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/98 (21%), Positives = 38/98 (38%), Gaps = 1/98 (1%)
Query: 662 QTGLYTLRQIKAATNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVN 721
QT ++ L++ + +G+G FG VY G I + + + + F
Sbjct: 20 QTSIF-LQEWDIPFEQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKR 78
Query: 722 EIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYMKNNCL 759
E+ +H N+V G C+ L ++ K L
Sbjct: 79 EVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTL 116
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Query: 684 VGEGGFGSVYKGILSD-GTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKL 737
+G G FG VY+ L D G ++A+K++ R NR E+ ++ H N+V+L
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRL 112
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Query: 684 VGEGGFGSVYKGILSD-GTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKL 737
+G G FG VY+ L D G ++A+K++ R NR E+ ++ H N+V+L
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRL 112
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Query: 684 VGEGGFGSVYKGILSD-GTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKL 737
+G G FG VY+ L D G ++A+K++ R NR E+ ++ H N+V+L
Sbjct: 64 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRL 114
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Query: 684 VGEGGFGSVYKGILSD-GTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKL 737
+G G FG VY+ L D G ++A+K++ R NR E+ ++ H N+V+L
Sbjct: 66 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRL 116
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 47/117 (40%), Gaps = 21/117 (17%)
Query: 645 CLGGKVSADKELRGLDLQTGLYTLRQIKAATNNFDPANKVGEGGFGSVYKGILS------ 698
C GK S+ +L+ + N +G G FG VY+G +S
Sbjct: 28 CFAGKTSSISDLK--------------EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP 73
Query: 699 DGTVIAVKQLSSK-SRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYM 754
+AVK L S Q +F+ E +IS H N+V+ G ++ ++ E M
Sbjct: 74 SPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELM 130
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 34.3 bits (77), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Query: 684 VGEGGFGSVYKGILSD-GTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKL 737
+G G FG VY+ L D G ++A+K++ R NR E+ ++ H N+V+L
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRL 157
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 34.3 bits (77), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 11/84 (13%)
Query: 677 NFDPANKVGEGGFGSV--YKGILSDGTVIAVK-----QLSSKSRQGNREFVNEIGMISAQ 729
N+ +G+G F V + IL+ G +AV+ QL+S S Q + E+ ++
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVRIIDKTQLNSSSLQ---KLFREVRIMKVL 70
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEY 753
HPN+VKL+ L LV EY
Sbjct: 71 NHPNIVKLFEVIETEKTLYLVMEY 94
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 34.3 bits (77), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 47/117 (40%), Gaps = 21/117 (17%)
Query: 645 CLGGKVSADKELRGLDLQTGLYTLRQIKAATNNFDPANKVGEGGFGSVYKGILS------ 698
C GK S+ +L+ + N +G G FG VY+G +S
Sbjct: 54 CFAGKTSSISDLK--------------EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP 99
Query: 699 DGTVIAVKQLSSK-SRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYM 754
+AVK L S Q +F+ E +IS H N+V+ G ++ ++ E M
Sbjct: 100 SPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELM 156
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 34.3 bits (77), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 47/117 (40%), Gaps = 21/117 (17%)
Query: 645 CLGGKVSADKELRGLDLQTGLYTLRQIKAATNNFDPANKVGEGGFGSVYKGILS------ 698
C GK S+ +L+ + N +G G FG VY+G +S
Sbjct: 30 CFAGKTSSISDLK--------------EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP 75
Query: 699 DGTVIAVKQLSSK-SRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYM 754
+AVK L S Q +F+ E +IS H N+V+ G ++ ++ E M
Sbjct: 76 SPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELM 132
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 47/117 (40%), Gaps = 21/117 (17%)
Query: 645 CLGGKVSADKELRGLDLQTGLYTLRQIKAATNNFDPANKVGEGGFGSVYKGILS------ 698
C GK S+ +L+ + N +G G FG VY+G +S
Sbjct: 28 CFAGKTSSISDLK--------------EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP 73
Query: 699 DGTVIAVKQLSS-KSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYM 754
+AVK L S Q +F+ E +IS H N+V+ G ++ ++ E M
Sbjct: 74 SPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELM 130
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 11/84 (13%)
Query: 677 NFDPANKVGEGGFGSV--YKGILSDGTVIAVK-----QLSSKSRQGNREFVNEIGMISAQ 729
N+ +G+G F V + IL+ G +AV+ QL+S S Q + E+ ++
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVRIIDKTQLNSSSLQ---KLFREVRIMKVL 70
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEY 753
HPN+VKL+ L LV EY
Sbjct: 71 NHPNIVKLFEVIETEKTLYLVMEY 94
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 47/117 (40%), Gaps = 21/117 (17%)
Query: 645 CLGGKVSADKELRGLDLQTGLYTLRQIKAATNNFDPANKVGEGGFGSVYKGILS------ 698
C GK S+ +L+ + N +G G FG VY+G +S
Sbjct: 13 CFAGKTSSISDLK--------------EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP 58
Query: 699 DGTVIAVKQLSSK-SRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYM 754
+AVK L S Q +F+ E +IS H N+V+ G ++ ++ E M
Sbjct: 59 SPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELM 115
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 684 VGEGGFGSVYKGILS------DGTVIAVKQLSSK-SRQGNREFVNEIGMISAQQHPNLVK 736
+G G FG VY+G +S +AVK L S Q +F+ E +IS H N+V+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 737 LYGCCVEGNQLLLVYEYM 754
G ++ ++ E M
Sbjct: 99 CIGVSLQSLPRFILLELM 116
>pdb|2ID5|A Chain A, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|B Chain B, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|C Chain C, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|D Chain D, Crystal Structure Of The Lingo-1 Ectodomain
Length = 477
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 5/112 (4%)
Query: 94 VVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLT---GSFSPQWASLQLVELSVMGNR 150
+ ++++ NLT + L YL+ L+LS N ++ GS + LQ E+ ++G +
Sbjct: 226 LTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQ--EIQLVGGQ 283
Query: 151 LSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGE 202
L+ P + L+ L++ GN T + NL+ LIL SN +
Sbjct: 284 LAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACD 335
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 47/117 (40%), Gaps = 21/117 (17%)
Query: 645 CLGGKVSADKELRGLDLQTGLYTLRQIKAATNNFDPANKVGEGGFGSVYKGILS------ 698
C GK S+ +L+ + N +G G FG VY+G +S
Sbjct: 28 CFAGKTSSISDLK--------------EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP 73
Query: 699 DGTVIAVKQLSSK-SRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYM 754
+AVK L S Q +F+ E +IS H N+V+ G ++ ++ E M
Sbjct: 74 SPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELM 130
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 47/117 (40%), Gaps = 21/117 (17%)
Query: 645 CLGGKVSADKELRGLDLQTGLYTLRQIKAATNNFDPANKVGEGGFGSVYKGILS------ 698
C GK S+ +L+ + N +G G FG VY+G +S
Sbjct: 13 CFAGKTSSISDLK--------------EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP 58
Query: 699 DGTVIAVKQLSSK-SRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYM 754
+AVK L S Q +F+ E +IS H N+V+ G ++ ++ E M
Sbjct: 59 SPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELM 115
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 33.9 bits (76), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Query: 682 NKVGEGGFGSVYKGIL---SDGTV-IAVKQLSSK---SRQGNREFVNEIGMISAQQHPNL 734
K+G+G FG V +G S TV +AVK L + +F+ E+ + + H NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 735 VKLYGCCV 742
++LYG +
Sbjct: 74 IRLYGVVL 81
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 33.9 bits (76), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 47/117 (40%), Gaps = 21/117 (17%)
Query: 645 CLGGKVSADKELRGLDLQTGLYTLRQIKAATNNFDPANKVGEGGFGSVYKGILS------ 698
C GK S+ +L+ + N +G G FG VY+G +S
Sbjct: 31 CFAGKTSSISDLK--------------EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP 76
Query: 699 DGTVIAVKQLSSK-SRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYM 754
+AVK L S Q +F+ E +IS H N+V+ G ++ ++ E M
Sbjct: 77 SPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELM 133
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 33.9 bits (76), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 47/117 (40%), Gaps = 21/117 (17%)
Query: 645 CLGGKVSADKELRGLDLQTGLYTLRQIKAATNNFDPANKVGEGGFGSVYKGILS------ 698
C GK S+ +L+ + N +G G FG VY+G +S
Sbjct: 5 CFAGKTSSISDLK--------------EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP 50
Query: 699 DGTVIAVKQLSSK-SRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYM 754
+AVK L S Q +F+ E +IS H N+V+ G ++ ++ E M
Sbjct: 51 SPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELM 107
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 33.9 bits (76), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Query: 682 NKVGEGGFGSVYKGIL---SDGTV-IAVKQLSSK---SRQGNREFVNEIGMISAQQHPNL 734
K+G+G FG V +G S TV +AVK L + +F+ E+ + + H NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 735 VKLYGCCV 742
++LYG +
Sbjct: 74 IRLYGVVL 81
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 33.9 bits (76), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 684 VGEGGFGSVYKGILS------DGTVIAVKQLSSK-SRQGNREFVNEIGMISAQQHPNLVK 736
+G G FG VY+G +S +AVK L S Q +F+ E +IS H N+V+
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 737 LYGCCVEGNQLLLVYEYM 754
G ++ ++ E M
Sbjct: 105 CIGVSLQSLPRFILLELM 122
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Query: 682 NKVGEGGFGSVYKGIL---SDGTV-IAVKQLSSK---SRQGNREFVNEIGMISAQQHPNL 734
K+G+G FG V +G S TV +AVK L + +F+ E+ + + H NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 735 VKLYGCCV 742
++LYG +
Sbjct: 74 IRLYGVVL 81
>pdb|4DWE|A Chain A, Crystal Structure Of A Hypothetical Protein (Bacova_03992)
From Bacteroides Ovatus Atcc 8483 At 2.01 A Resolution
Length = 480
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 39/95 (41%), Gaps = 22/95 (23%)
Query: 95 VTIALKAQNLTGTLPTELSKLRYLKQ---LDLSRNCLTGSFSPQWASLQLVELSVMGNRL 151
+TI LKA G L TE+ L+Y K L +C +FS WA++ LS +
Sbjct: 49 ITIHLKADRQVGYLYTEIPTLKYNKDWLFLXTQDDCXHSAFSYTWAAIHGKPLSYI---- 104
Query: 152 SGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKL 186
++ L+N G +PPD L
Sbjct: 105 ------YYCDLAHLQN---------GDLPPDYYSL 124
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 684 VGEGGFGSVYKGILS------DGTVIAVKQLSSK-SRQGNREFVNEIGMISAQQHPNLVK 736
+G G FG VY+G +S +AVK L S Q +F+ E +IS H N+V+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 737 LYGCCVEGNQLLLVYEYM 754
G ++ ++ E M
Sbjct: 99 CIGVSLQSLPRFILLELM 116
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 6/75 (8%)
Query: 684 VGEGGFGSV-----YKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLY 738
+GEG FG V YK +QL KS R EI + +HP+++KLY
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMR-VEREISYLKLLRHPHIIKLY 75
Query: 739 GCCVEGNQLLLVYEY 753
+++V EY
Sbjct: 76 DVITTPTDIVMVIEY 90
>pdb|2Z66|A Chain A, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|B Chain B, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|C Chain C, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|D Chain D, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 306
Score = 33.5 bits (75), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 51/120 (42%), Gaps = 3/120 (2%)
Query: 107 TLPTELSKLRYLKQLDLSRNCL--TGSFSPQWASLQLVELSVMGNRLSGPFPKVLTNITT 164
T+ + L L+ LD + L FS + L+ L + F + +++
Sbjct: 92 TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSS 151
Query: 165 LKNLSIEGNLFTGSIPPDI-RKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNF 223
L+ L + GN F + PDI +L NL L LS P L++L L +S NNF
Sbjct: 152 LEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNF 211
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 86/206 (41%), Gaps = 14/206 (6%)
Query: 168 LSIEGNLFTGSIPPDI-RKLINLQKLILSSN--SFTGELPAELTKLTNLNDLRISDNNFS 224
L +E N S+P + KL L KL LSSN SF G T+L L +S N
Sbjct: 33 LELESNKLQ-SLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI 91
Query: 225 GKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMN- 283
F+G ++++ L Q S+L+ + S SL +L D+ + + N
Sbjct: 92 TMSSNFLG-LEQLEHLDFQHSNLKQM--SEFSVFLSLRNLIYLDISHTHTRVAFNGIFNG 148
Query: 284 LKTLILTK----CLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTG 339
L +L + K +PD ++ L +DLS L PT F L+ + ++
Sbjct: 149 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSH 208
Query: 340 NKL--TGPVPKYIFNSNKNVDISLNN 363
N P NS + +D SLN+
Sbjct: 209 NNFFSLDTFPYKCLNSLQVLDYSLNH 234
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 33.5 bits (75), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 8/103 (7%)
Query: 669 RQIKAATNNFDPANKVGEGGFGSVYKGILSDGT----VIAVKQLSSKSRQGNR-EFVNEI 723
+Q + + +D + +G G F V IL++ ++A+K ++ K+ +G NEI
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKKALEGKEGSMENEI 67
Query: 724 GMISAQQHPNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFGK 766
++ +HPN+V L G L L+ + + L I K
Sbjct: 68 AVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEK 110
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 33.5 bits (75), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 684 VGEGGFGSVYKGILS------DGTVIAVKQLSSK-SRQGNREFVNEIGMISAQQHPNLVK 736
+G G FG VY+G +S +AVK L S Q +F+ E +IS H N+V+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 737 LYGCCVEGNQLLLVYEYM 754
G ++ ++ E M
Sbjct: 99 CIGVSLQSLPRFILLELM 116
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 33.5 bits (75), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Query: 682 NKVGEGGFGSVYKGIL---SDGTV-IAVKQLSSK---SRQGNREFVNEIGMISAQQHPNL 734
K+G+G FG V +G S TV +AVK L + +F+ E+ + + H NL
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 735 VKLYGCCV 742
++LYG +
Sbjct: 84 IRLYGVVL 91
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 33.5 bits (75), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Query: 682 NKVGEGGFGSVYKGIL---SDGTV-IAVKQLSSK---SRQGNREFVNEIGMISAQQHPNL 734
K+G+G FG V +G S TV +AVK L + +F+ E+ + + H NL
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 735 VKLYGCCV 742
++LYG +
Sbjct: 84 IRLYGVVL 91
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 33.5 bits (75), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 684 VGEGGFGSVYKGILS------DGTVIAVKQLSSK-SRQGNREFVNEIGMISAQQHPNLVK 736
+G G FG VY+G +S +AVK L S Q +F+ E +IS H N+V+
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 737 LYGCCVEGNQLLLVYEYM 754
G ++ ++ E M
Sbjct: 125 CIGVSLQSLPRFILLELM 142
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 33.5 bits (75), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Query: 682 NKVGEGGFGSVYKGIL---SDGTV-IAVKQLSSK---SRQGNREFVNEIGMISAQQHPNL 734
K+G+G FG V +G S TV +AVK L + +F+ E+ + + H NL
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 735 VKLYGCCV 742
++LYG +
Sbjct: 78 IRLYGVVL 85
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 33.5 bits (75), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Query: 682 NKVGEGGFGSVYKGIL---SDGTV-IAVKQLSSK---SRQGNREFVNEIGMISAQQHPNL 734
K+G+G FG V +G S TV +AVK L + +F+ E+ + + H NL
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 735 VKLYGCCV 742
++LYG +
Sbjct: 78 IRLYGVVL 85
>pdb|1W8A|A Chain A, Third Lrr Domain Of Drosophila Slit
Length = 192
Score = 33.5 bits (75), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Query: 93 HVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRL 151
H+V + LK LTG P ++++L L N + + + L QL L++ N++
Sbjct: 55 HLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQI 114
Query: 152 SGPFPKVLTNITTLKNLSIEGNLF 175
S P ++ +L +L++ N F
Sbjct: 115 SCVMPGSFEHLNSLTSLNLASNPF 138
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 114 KLRYLKQLDLSRNCLTGSFSPQW--ASLQLVELSVMGNRLSGPFPKVLTNITTLKNLSIE 171
+L +L +L+L RN LTG P + + EL + N++ K+ + LK L++
Sbjct: 52 RLPHLVKLELKRNQLTG-IEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLY 110
Query: 172 GNLFTGSIPPDIRKLINLQKLILSSNSF 199
N + +P L +L L L+SN F
Sbjct: 111 DNQISCVMPGSFEHLNSLTSLNLASNPF 138
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 33.5 bits (75), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 10/80 (12%)
Query: 684 VGEGGFGSVYK----GILSD----GTVIAVKQLSSKSRQGN-REFVNEIGMISA-QQHPN 733
+GEG FG V GI D +AVK L + + + + V+E+ M+ +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 734 LVKLYGCCVEGNQLLLVYEY 753
++ L G C + L ++ Y
Sbjct: 103 IINLLGACTQDGPLYVIVAY 122
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 33.5 bits (75), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 11/84 (13%)
Query: 677 NFDPANKVGEGGFGSV--YKGILSDGTVIAVK-----QLSSKSRQGNREFVNEIGMISAQ 729
N+ +G+G F V + IL+ G +AVK QL+S S Q + E+ +
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQ---KLFREVRIXKVL 70
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEY 753
HPN+VKL+ L LV EY
Sbjct: 71 NHPNIVKLFEVIETEKTLYLVXEY 94
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 677 NFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLV 735
+F +G GGFG V+K DG +K++ + + R E+ ++ H N+V
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAER----EVKALAKLDHVNIV 67
Query: 736 KLYGC 740
GC
Sbjct: 68 HYNGC 72
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 33.1 bits (74), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Query: 675 TNNFDPANKVGEGGFGSVYKGI-LSDGTVIAVKQLSSKSRQGNREFVN-EIGMISAQQHP 732
++D +GEG +G V + +AVK + K E + EI + + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHE 65
Query: 733 NLVKLYGCCVEGNQLLLVYEY 753
N+VK YG EGN L EY
Sbjct: 66 NVVKFYGHRREGNIQYLFLEY 86
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 33.1 bits (74), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Query: 675 TNNFDPANKVGEGGFGSVYKGI-LSDGTVIAVKQLSSKSRQGNREFVN-EIGMISAQQHP 732
++D +GEG +G V + +AVK + K E + EI + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 733 NLVKLYGCCVEGNQLLLVYEY 753
N+VK YG EGN L EY
Sbjct: 65 NVVKFYGHRREGNIQYLFLEY 85
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.7 bits (73), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Query: 675 TNNFDPANKVGEGGFGSVYKGI-LSDGTVIAVKQLSSKSRQGNREFVN-EIGMISAQQHP 732
++D +GEG +G V + +AVK + K E + EI + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 733 NLVKLYGCCVEGNQLLLVYEY 753
N+VK YG EGN L EY
Sbjct: 65 NVVKFYGHRREGNIQYLFLEY 85
>pdb|3RG1|A Chain A, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|E Chain E, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|I Chain I, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|M Chain M, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|B Chain B, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|F Chain F, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|J Chain J, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|N Chain N, Crystal Structure Of The Rp105MD-1 Complex
Length = 612
Score = 32.7 bits (73), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 102/242 (42%), Gaps = 52/242 (21%)
Query: 179 IPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKI-PEFIGKWKKI 237
+P I + +L+KL+L++NSF +L DL I N + + K + +
Sbjct: 292 LPSGIEGMNSLKKLVLNANSFDQLCQINAASFPSLRDLYIKGNMRKLDLGTRCLEKLENL 351
Query: 238 QKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSE------SAF---PKLDKMN----- 283
QKL + S +E ++ L +L L+ +L +E AF P+L+ ++
Sbjct: 352 QKLDLSHSDIEASDCCNLQ-LKNLRHLQYLNLSYNEPLGLEDQAFKECPQLELLDVAFTH 410
Query: 284 ---------------LKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEK 328
L+ L L+ CL+ + + L++++L N+ G
Sbjct: 411 LHVKAPHSPFQNLHLLRVLNLSHCLLDTSNQHLLAGLQDLRHLNLQGNSFQDG------S 464
Query: 329 LAKTNFMYLTG----------NKLTGPVPKYIFNSNKNV---DISLNNFTWESSDPIECP 375
++KTN + + G N L+ + + F+ +NV D+S N+ T +S D +
Sbjct: 465 ISKTNLLQMVGSLEILILSSCNLLS--IDQQAFHGLRNVNHLDLSHNSLTGDSMDALSHL 522
Query: 376 RG 377
+G
Sbjct: 523 KG 524
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 32.7 bits (73), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 15/89 (16%)
Query: 684 VGEGGFGSVYKGILSD-GTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLY---- 738
+G GG G V+ + +D +A+K++ Q + + EI +I H N+VK++
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 739 ----------GCCVEGNQLLLVYEYMKNN 757
G E N + +V EYM+ +
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYMETD 107
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 32.7 bits (73), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Query: 675 TNNFDPANKVGEGGFGSVYKGI-LSDGTVIAVKQLSSKSRQGNREFVN-EIGMISAQQHP 732
++D +GEG +G V + +AVK + K E + EI + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 65
Query: 733 NLVKLYGCCVEGNQLLLVYEY 753
N+VK YG EGN L EY
Sbjct: 66 NVVKFYGHRREGNIQYLFLEY 86
>pdb|3A79|B Chain B, Crystal Structure Of Tlr2-Tlr6-Pam2csk4 Complex
Length = 562
Score = 32.7 bits (73), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 9/122 (7%)
Query: 118 LKQLDLSRNCLTGSFSPQ---WASLQLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNL 174
L+ LD+S N L + WA LV L++ N L+G + L +K L + N
Sbjct: 405 LETLDVSLNSLNSHAYDRTCAWAESILV-LNLSSNMLTGSVFRCLP--PKVKVLDLHNNR 461
Query: 175 FTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIP--EFIG 232
SIP D+ L LQ+L ++SN +LT+L + + DN + P ++
Sbjct: 462 IM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPGIRYLS 520
Query: 233 KW 234
+W
Sbjct: 521 EW 522
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 32.7 bits (73), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 10/80 (12%)
Query: 684 VGEGGFGSVYK----GILSD----GTVIAVKQLSSKSRQGN-REFVNEIGMISA-QQHPN 733
+GEG FG V GI D +AVK L + + + + V+E+ M+ +H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 734 LVKLYGCCVEGNQLLLVYEY 753
++ L G C + L ++ Y
Sbjct: 103 IINLLGACTQDGPLYVIVGY 122
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 32.7 bits (73), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 677 NFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLV 735
+F +G GGFG V+K DG ++++ + + R E+ ++ H N+V
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAER----EVKALAKLDHVNIV 68
Query: 736 KLYGC 740
GC
Sbjct: 69 HYNGC 73
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 32.7 bits (73), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Query: 675 TNNFDPANKVGEGGFGSVYKGI-LSDGTVIAVKQLSSKSRQGNREFVN-EIGMISAQQHP 732
++D +GEG +G V + +AVK + K E + EI + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 733 NLVKLYGCCVEGNQLLLVYEY 753
N+VK YG EGN L EY
Sbjct: 66 NVVKFYGHRREGNIQYLFLEY 86
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 32.7 bits (73), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Query: 675 TNNFDPANKVGEGGFGSVYKGI-LSDGTVIAVKQLSSKSRQGNREFVN-EIGMISAQQHP 732
++D +GEG +G V + +AVK + K E + EI + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 733 NLVKLYGCCVEGNQLLLVYEY 753
N+VK YG EGN L EY
Sbjct: 65 NVVKFYGHRREGNIQYLFLEY 85
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.7 bits (73), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Query: 675 TNNFDPANKVGEGGFGSVYKGI-LSDGTVIAVKQLSSKSRQGNREFVN-EIGMISAQQHP 732
++D +GEG +G V + +AVK + K E + EI + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 733 NLVKLYGCCVEGNQLLLVYEY 753
N+VK YG EGN L EY
Sbjct: 65 NVVKFYGHRREGNIQYLFLEY 85
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 32.7 bits (73), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Query: 675 TNNFDPANKVGEGGFGSVYKGI-LSDGTVIAVKQLSSKSRQGNREFVN-EIGMISAQQHP 732
++D +GEG +G V + +AVK + K E + EI + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 733 NLVKLYGCCVEGNQLLLVYEY 753
N+VK YG EGN L EY
Sbjct: 65 NVVKFYGHRREGNIQYLFLEY 85
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.7 bits (73), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Query: 675 TNNFDPANKVGEGGFGSVYKGI-LSDGTVIAVKQLSSKSRQGNREFVN-EIGMISAQQHP 732
++D +GEG +G V + +AVK + K E + EI + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 733 NLVKLYGCCVEGNQLLLVYEY 753
N+VK YG EGN L EY
Sbjct: 65 NVVKFYGHRREGNIQYLFLEY 85
>pdb|2Z80|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
pdb|2Z80|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 353
Score = 32.7 bits (73), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%)
Query: 282 MNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGN 340
+NL+ L+LT I+ D + L+++DLS+N L+ + F+ L+ F+ L GN
Sbjct: 76 VNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGN 134
Score = 29.6 bits (65), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 61/138 (44%), Gaps = 6/138 (4%)
Query: 152 SGPFPKVLTNIT-TLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKL 210
SG + + +T +K+L + N T D+++ +NLQ L+L+SN + L
Sbjct: 40 SGSLNSIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSL 99
Query: 211 TNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASI-SALTSLTDLRISDL 269
+L L +S N S + + L++ G+ + S+ S LT L LR+
Sbjct: 100 GSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRV--- 156
Query: 270 KGSESAFPKLDKMNLKTL 287
G+ F K+ + + L
Sbjct: 157 -GNMDTFTKIQRKDFAGL 173
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 32.7 bits (73), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 48/103 (46%), Gaps = 8/103 (7%)
Query: 669 RQIKAATNNFDPANKVGEGGFGSVYKGILSDGT----VIAVKQLSSKSRQGNR-EFVNEI 723
+Q + + +D + +G G F V IL++ ++A+K ++ ++ +G NEI
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEI 67
Query: 724 GMISAQQHPNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFGK 766
++ +HPN+V L G L L+ + + L I K
Sbjct: 68 AVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEK 110
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 32.7 bits (73), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 684 VGEGGFGSVYKGIL-----SDGTVIAVKQLSSKSRQGNR--EFVNEIGMISAQQHPNLVK 736
+GEG FG V + G +AVK L +S GN + EI ++ H N+VK
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIVK 87
Query: 737 LYGCCVE--GNQLLLVYEYMKNNCLSRAI 763
G C E GN + L+ E++ + L +
Sbjct: 88 YKGICTEDGGNGIKLIMEFLPSGSLKEYL 116
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 32.7 bits (73), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Query: 675 TNNFDPANKVGEGGFGSVYKGI-LSDGTVIAVKQLSSKSRQGNREFVN-EIGMISAQQHP 732
++D +GEG +G V + +AVK + K E + EI + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 733 NLVKLYGCCVEGNQLLLVYEY 753
N+VK YG EGN L EY
Sbjct: 65 NVVKFYGHRREGNIQYLFLEY 85
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 32.7 bits (73), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Query: 675 TNNFDPANKVGEGGFGSVYKGI-LSDGTVIAVKQLSSKSRQGNREFVN-EIGMISAQQHP 732
++D +GEG +G V + +AVK + K E + EI + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 733 NLVKLYGCCVEGNQLLLVYEY 753
N+VK YG EGN L EY
Sbjct: 65 NVVKFYGHRREGNIQYLFLEY 85
>pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 570
Score = 32.7 bits (73), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 106/258 (41%), Gaps = 34/258 (13%)
Query: 131 SFSPQWASLQLVELSVMGNRLSGPFPKVLTNITTLKNLSIE----GNLFTGSIPPDIRKL 186
S++ W L+LV G FP + + +LK L+ GN F+ P
Sbjct: 301 SYNFGWQHLELVNCKF------GQFPTL--KLKSLKRLTFTSNKGGNAFSEVDLP----- 347
Query: 187 INLQKLILSSN--SFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQG 244
+L+ L LS N SF G T+L L +S N F+G ++++ L Q
Sbjct: 348 -SLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLG-LEQLEHLDFQH 405
Query: 245 SSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMN-LKTLILTK----CLIHGEIP 299
S+L+ + S SL +L D+ + + N L +L + K +P
Sbjct: 406 SNLKQM--SEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLP 463
Query: 300 DYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIFNSNKNVD- 358
D ++ L +DLS L PT F L+ + + N+L VP IF+ ++
Sbjct: 464 DIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKS-VPDGIFDRLTSLQK 522
Query: 359 ISLNNFTWESSDPIECPR 376
I L+ W+ S CPR
Sbjct: 523 IWLHTNPWDCS----CPR 536
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 32.3 bits (72), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Query: 675 TNNFDPANKVGEGGFGSVYKGI-LSDGTVIAVKQLSSKSRQGNREFVN-EIGMISAQQHP 732
++D +GEG +G V + +AVK + K E + EI + H
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 63
Query: 733 NLVKLYGCCVEGNQLLLVYEY 753
N+VK YG EGN L EY
Sbjct: 64 NVVKFYGHRREGNIQYLFLEY 84
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.3 bits (72), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Query: 675 TNNFDPANKVGEGGFGSVYKGI-LSDGTVIAVKQLSSKSRQGNREFVN-EIGMISAQQHP 732
++D +GEG +G V + +AVK + K E + EI + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 733 NLVKLYGCCVEGNQLLLVYEY 753
N+VK YG EGN L EY
Sbjct: 65 NVVKFYGHRREGNIQYLFLEY 85
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 32.3 bits (72), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Query: 675 TNNFDPANKVGEGGFGSVYKGI-LSDGTVIAVKQLSSKSRQGNREFVN-EIGMISAQQHP 732
++D +GEG +G V + +AVK + K E + EI + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 733 NLVKLYGCCVEGNQLLLVYEY 753
N+VK YG EGN L EY
Sbjct: 66 NVVKFYGHRREGNIQYLFLEY 86
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 32.3 bits (72), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 42/90 (46%), Gaps = 16/90 (17%)
Query: 684 VGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGN-----------REFVNEIGMISAQQHP 732
+ G +G+V G+ S+G +A+K++ + G + + EI +++ HP
Sbjct: 30 ISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP 89
Query: 733 NLVKLYGCCVE-----GNQLLLVYEYMKNN 757
N++ L V ++L LV E M+ +
Sbjct: 90 NILGLRDIFVHFEEPAMHKLYLVTELMRTD 119
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 32.3 bits (72), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Query: 675 TNNFDPANKVGEGGFGSVYKGI-LSDGTVIAVKQLSSKSRQGNREFVN-EIGMISAQQHP 732
++D +GEG +G V + +AVK + K E + EI + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 733 NLVKLYGCCVEGNQLLLVYEY 753
N+VK YG EGN L EY
Sbjct: 65 NVVKFYGHRREGNIQYLFLEY 85
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 32.3 bits (72), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 22/104 (21%), Positives = 47/104 (45%), Gaps = 16/104 (15%)
Query: 670 QIKAATNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGN-----------RE 718
++ A + + + G +G+V G+ S+G +A+K++ + G +
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 719 FVNEIGMISAQQHPNLVKLYGCCVE-----GNQLLLVYEYMKNN 757
+ EI +++ HPN++ L V ++L LV E M+ +
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTD 119
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 32.3 bits (72), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 48/103 (46%), Gaps = 8/103 (7%)
Query: 669 RQIKAATNNFDPANKVGEGGFGSVYKGILSDGT----VIAVKQLSSKSRQGNR-EFVNEI 723
+Q + + +D + +G G F V IL++ ++A+K ++ ++ +G NEI
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEI 67
Query: 724 GMISAQQHPNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFGK 766
++ +HPN+V L G L L+ + + L I K
Sbjct: 68 AVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEK 110
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 32.3 bits (72), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 684 VGEGGFGSVYKGIL-----SDGTVIAVKQLSSKSRQGNR--EFVNEIGMISAQQHPNLVK 736
+GEG FG V + G +AVK L +S GN + EI ++ H N+VK
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIVK 75
Query: 737 LYGCCVE--GNQLLLVYEYMKNNCLSRAI 763
G C E GN + L+ E++ + L +
Sbjct: 76 YKGICTEDGGNGIKLIMEFLPSGSLKEYL 104
>pdb|2WFH|A Chain A, The Human Slit 2 Dimerization Domain D4
pdb|2WFH|B Chain B, The Human Slit 2 Dimerization Domain D4
Length = 193
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 108 LPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLK 166
+P ELS ++L +DLS N ++ + ++++ QL+ L + NRL P+ + +L+
Sbjct: 46 VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLR 105
Query: 167 NLSIEGN 173
LS+ GN
Sbjct: 106 LLSLHGN 112
Score = 29.6 bits (65), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 304 DMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIFN 352
+MT+L + LS+N L P TF+ L + L GN ++ VP+ FN
Sbjct: 76 NMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISV-VPEGAFN 123
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 10/99 (10%)
Query: 672 KAATNNFDPANKVGEGGFGSVYKGILSDGTV----IAVKQLSSKSRQGN---REFVNEIG 724
K + +K+G GG +VY L++ T+ +A+K + R+ + F E+
Sbjct: 7 KIINERYKIVDKLGGGGMSTVY---LAEDTILNIKVAIKAIFIPPREKEETLKRFEREVH 63
Query: 725 MISAQQHPNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAI 763
S H N+V + E + LV EY++ LS I
Sbjct: 64 NSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYI 102
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 48/103 (46%), Gaps = 8/103 (7%)
Query: 669 RQIKAATNNFDPANKVGEGGFGSVYKGILSDGT----VIAVKQLSSKSRQGNR-EFVNEI 723
+Q + + +D + +G G F V IL++ ++A+K ++ ++ +G NEI
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEI 67
Query: 724 GMISAQQHPNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFGK 766
++ +HPN+V L G L L+ + + L I K
Sbjct: 68 AVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEK 110
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/100 (20%), Positives = 43/100 (43%), Gaps = 20/100 (20%)
Query: 672 KAATNNFDPANKVGEGGFGSVY------------KGILSDGTVIAVKQLSSKSRQGNREF 719
K + +F +G G FG V+ +L V+ +KQ+ +
Sbjct: 2 KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTN------- 54
Query: 720 VNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYMKNNCL 759
+E M+S HP +++++G + Q+ ++ +Y++ L
Sbjct: 55 -DERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGEL 93
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Query: 675 TNNFDPANKVGEGGFGSVYKGI-LSDGTVIAVKQLSSKSRQGNREFVN-EIGMISAQQHP 732
++D +GEG +G V + +AVK + K E + EI + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 733 NLVKLYGCCVEGNQLLLVYEY 753
N+VK YG EGN L EY
Sbjct: 66 NVVKFYGHRREGNIQYLFLEY 86
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Query: 675 TNNFDPANKVGEGGFGSVYKGI-LSDGTVIAVKQLSSKSRQGNREFVN-EIGMISAQQHP 732
++D +GEG +G V + +AVK + K E + EI + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 733 NLVKLYGCCVEGNQLLLVYEY 753
N+VK YG EGN L EY
Sbjct: 66 NVVKFYGHRREGNIQYLFLEY 86
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Query: 675 TNNFDPANKVGEGGFGSVYKGI-LSDGTVIAVKQLSSKSRQGNREFVN-EIGMISAQQHP 732
++D +GEG +G V + +AVK + K E + EI + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 733 NLVKLYGCCVEGNQLLLVYEY 753
N+VK YG EGN L EY
Sbjct: 66 NVVKFYGHRREGNIQYLFLEY 86
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 11/84 (13%)
Query: 677 NFDPANKVGEGGFGSV--YKGILSDGTVIAVK-----QLSSKSRQGNREFVNEIGMISAQ 729
N+ +G+G F V + +L+ G +AVK QL+ S Q + E+ ++
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLT-GREVAVKIIDKTQLNPTSLQ---KLFREVRIMKIL 71
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEY 753
HPN+VKL+ L LV EY
Sbjct: 72 NHPNIVKLFEVIETEKTLYLVMEY 95
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 40/95 (42%), Gaps = 6/95 (6%)
Query: 675 TNNFDPANKVGEGGFGSVYKGI-LSDGTVIAVKQLSSKSRQGNREFVN-EIGMISAQQHP 732
++D +GEG +G V + +AVK + K E + EI + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 733 NLVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFGKL 767
N+VK YG EGN L EY C +F ++
Sbjct: 66 NVVKFYGHRREGNIQYLFLEY----CSGGELFDRI 96
>pdb|2Z7X|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 520
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 66/141 (46%), Gaps = 13/141 (9%)
Query: 113 SKLRYLKQLDLSRNCLT-----GSFSPQWASLQLVELSVMGNRLSGPFPKVLTNITTLKN 167
++++ L+QLD+S+N ++ G S W L+ L++ N L+ + L +K
Sbjct: 371 TQMKSLQQLDISQNSVSYDEKKGDCS--WTK-SLLSLNMSSNILTDTIFRCLP--PRIKV 425
Query: 168 LSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKI 227
L + N SIP + KL LQ+L ++SN +LT+L + + N +
Sbjct: 426 LDLHSNKI-KSIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 484
Query: 228 P--EFIGKWKKIQKLHIQGSS 246
P +++ +W QGS+
Sbjct: 485 PRIDYLSRWLNKNSQKEQGSA 505
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Query: 675 TNNFDPANKVGEGGFGSVYKGI-LSDGTVIAVKQLSSKSRQGNREFVN-EIGMISAQQHP 732
++D +GEG +G V + +AVK + K E + EI + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 733 NLVKLYGCCVEGNQLLLVYEY 753
N+VK YG EGN L EY
Sbjct: 65 NVVKFYGHRREGNIQYLFLEY 85
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 6/78 (7%)
Query: 668 LRQIKAATNNFDPANKVGEGGFGSVYKGIL--SDGTVI--AVKQLSSK--SRQGNREFVN 721
L + F +G+G FGSV + L DG+ + AVK L + + EF+
Sbjct: 15 LEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLR 74
Query: 722 EIGMISAQQHPNLVKLYG 739
E + HP++ KL G
Sbjct: 75 EAACMKEFDHPHVAKLVG 92
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 4/92 (4%)
Query: 676 NNFDPANKVGEGGFGSVYKGI-LSDGTVIAVKQLSSKS--RQGNREFV-NEIGMISAQQH 731
+F +GEG F +V L+ A+K L + ++ +V E ++S H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 732 PNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAI 763
P VKLY + +L Y KN CL + I
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYI 123
>pdb|3M19|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
pdb|3M19|B Chain B, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
Length = 251
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 56/116 (48%), Gaps = 5/116 (4%)
Query: 238 QKLHIQGSSLEGPIPASISALTSLTDLRISDLKG-SESAFPKLDKMNLKTLILTKCLIHG 296
+++ QG SL+ +P+ I A T DL+ + L S++ F L K+ L + +
Sbjct: 17 KEVDCQGKSLDS-VPSGIPADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQ--LQT 73
Query: 297 EIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIFN 352
D+T+L + L+ N L F+ L + + +YL GN+L +P +F+
Sbjct: 74 LSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKS-LPSGVFD 128
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 42/98 (42%), Gaps = 4/98 (4%)
Query: 140 QLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPD-IRKLINLQKLILSSNS 198
QL +L + GN+L V +T LK L + N SIP KL NLQ L LS+N
Sbjct: 108 QLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQ-SIPAGAFDKLTNLQTLSLSTNQ 166
Query: 199 FTGELPAELTKLTNLNDLRISDNNFSGKIPE--FIGKW 234
+L L + + N F E ++ +W
Sbjct: 167 LQSVPHGAFDRLGKLQTITLFGNQFDCSRCEILYLSQW 204
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 8/105 (7%)
Query: 141 LVELSVMG---NRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDI-RKLINLQKLILSS 196
L EL +G N+L+ V ++T L L + GN S+P + +L L++L L++
Sbjct: 82 LTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRLNT 140
Query: 197 NSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLH 241
N KLTNL L +S N +P G + ++ KL
Sbjct: 141 NQLQSIPAGAFDKLTNLQTLSLSTNQLQ-SVPH--GAFDRLGKLQ 182
Score = 30.4 bits (67), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 72/204 (35%), Gaps = 31/204 (15%)
Query: 183 IRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHI 242
R L L L L N LT L L +++N + ++ KL++
Sbjct: 55 FRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYL 114
Query: 243 QGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYI 302
G+ L+ LT L +LR++ + DK
Sbjct: 115 GGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDK--------------------- 153
Query: 303 GDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIF-------NSNK 355
+T L+ + LS N L F++L K + L GN+ + ++ NSNK
Sbjct: 154 --LTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCSRCEILYLSQWIRENSNK 211
Query: 356 NVDISLNNFTWESSDPIECPRGSV 379
D + N ES D + C G V
Sbjct: 212 VKDGTGQNL-HESPDGVTCSDGKV 234
>pdb|3M18|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R2.1 In Complex With Hen Egg Lysozyme
Length = 251
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 56/116 (48%), Gaps = 5/116 (4%)
Query: 238 QKLHIQGSSLEGPIPASISALTSLTDLRISDLKG-SESAFPKLDKMNLKTLILTKCLIHG 296
+++ QG SL+ +P+ I A T DL+ + L S++ F L K+ L + +
Sbjct: 17 KEVDCQGKSLDS-VPSGIPADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQ--LQT 73
Query: 297 EIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIFN 352
D+T+L + L+ N L F+ L + + +YL GN+L +P +F+
Sbjct: 74 LSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKS-LPSGVFD 128
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 42/98 (42%), Gaps = 4/98 (4%)
Query: 140 QLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPD-IRKLINLQKLILSSNS 198
QL +L + GN+L V +T LK L + N SIP KL NLQ L LS+N
Sbjct: 108 QLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQ-SIPAGAFDKLTNLQTLSLSTNQ 166
Query: 199 FTGELPAELTKLTNLNDLRISDNNFSGKIPE--FIGKW 234
+L L + + N F E ++ +W
Sbjct: 167 LQSVPHGAFDRLGKLQTITLFGNQFDCSRCETLYLSQW 204
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 8/105 (7%)
Query: 141 LVELSVMG---NRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDI-RKLINLQKLILSS 196
L EL +G N+L+ V ++T L L + GN S+P + +L L++L L++
Sbjct: 82 LTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRLNT 140
Query: 197 NSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLH 241
N KLTNL L +S N +P G + ++ KL
Sbjct: 141 NQLQSIPAGAFDKLTNLQTLSLSTNQLQ-SVPH--GAFDRLGKLQ 182
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 72/204 (35%), Gaps = 31/204 (15%)
Query: 183 IRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHI 242
R L L L L N LT L L +++N + ++ KL++
Sbjct: 55 FRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYL 114
Query: 243 QGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYI 302
G+ L+ LT L +LR++ + DK
Sbjct: 115 GGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDK--------------------- 153
Query: 303 GDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIF-------NSNK 355
+T L+ + LS N L F++L K + L GN+ + ++ NSNK
Sbjct: 154 --LTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCSRCETLYLSQWIRENSNK 211
Query: 356 NVDISLNNFTWESSDPIECPRGSV 379
D + N ES D + C G V
Sbjct: 212 VKDGTGQNL-HESPDGVTCSDGKV 234
>pdb|2Z7X|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 549
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%)
Query: 282 MNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGN 340
+NL+ L+LT I+ D + L+++DLS+N L+ + F+ L+ F+ L GN
Sbjct: 50 VNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGN 108
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 172 GNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFI 231
NL +I +I K L +L L+ NS T ELPAE+ L+NL L +S N + +P +
Sbjct: 232 SNLQIFNISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLTS-LPAEL 289
Query: 232 G 232
G
Sbjct: 290 G 290
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 108 LPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQLVELSVMGNRLSGPFPKVLTNITTLKN 167
LP E+ L L+ LDLS N LT + + QL N ++ P N+ L+
Sbjct: 262 LPAEIKNLSNLRVLDLSHNRLTSLPAELGSCFQLKYFYFFDNMVTT-LPWEFGNLCNLQF 320
Query: 168 LSIEGN 173
L +EGN
Sbjct: 321 LGVEGN 326
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 684 VGEGGFGSVYKGILSD-GTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKL 737
+G G FG VY+ L D G ++A+K++ NR E+ ++ H N+V+L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR----ELQIMRKLDHCNIVRL 78
>pdb|3RFJ|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 279
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 52/126 (41%), Gaps = 4/126 (3%)
Query: 144 LSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDI-RKLINLQKLILSSNSFTGE 202
L++ GN+L L +T L L + GN S+P + KL NL++L+L N
Sbjct: 68 LALGGNKLHDI--SALKELTNLTYLILTGNQLQ-SLPNGVFDKLTNLKELVLVENQLQSL 124
Query: 203 LPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLT 262
KLTNL L + N K + +L + + L+ LT L
Sbjct: 125 PDGVFDKLTNLTYLYLYHNQLQSLPKGVFDKLTNLTRLDLDNNQLQSLPEGVFDKLTQLK 184
Query: 263 DLRISD 268
L ++D
Sbjct: 185 QLSLND 190
Score = 30.4 bits (67), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 9/109 (8%)
Query: 254 SISALTSLTDLRISDLKGSE----SAFPKLDKMNLKTLILTKCLIHGEIPDYIGD-MTKL 308
S+ + L ++R L G++ SA +L NL LILT + +P+ + D +T L
Sbjct: 55 SVQGIQYLPNVRYLALGGNKLHDISALKEL--TNLTYLILTGNQLQS-LPNGVFDKLTNL 111
Query: 309 KNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIFNSNKNV 357
K + L N L F+KL ++YL N+L +PK +F+ N+
Sbjct: 112 KELVLVENQLQSLPDGVFDKLTNLTYLYLYHNQLQS-LPKGVFDKLTNL 159
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 684 VGEGGFGSVYKGILSD-GTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKL 737
+G G FG VY+ L D G ++A+K++ NR E+ ++ H N+V+L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR----ELQIMRKLDHCNIVRL 78
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 684 VGEGGFGSVYKGILSD-GTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKL 737
+G G FG VY+ L D G ++A+K++ NR E+ ++ H N+V+L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR----ELQIMRKLDHCNIVRL 78
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Query: 640 MRWKGCLGGKVSADKELRGL---DLQ-TGLYTLRQIKAATNNFDPANKVGEGGFGSVYKG 695
+ ++G L K+++ LR DL T L ++ + + + +G GGFGSVY G
Sbjct: 11 LYFQGSLLSKINSLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSG 70
Query: 696 I-LSDGTVIAVKQLS 709
I +SD +A+K +
Sbjct: 71 IRVSDNLPVAIKHVE 85
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 671 IKAATNNFDPANKVGEGGFGSVYKGILSD-GTVIAVKQLSSKS---RQGNREFVNEIGMI 726
I N+F +G GGFG VY +D G + A+K L K +QG +NE M+
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 727 S 727
S
Sbjct: 244 S 244
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 671 IKAATNNFDPANKVGEGGFGSVYKGILSD-GTVIAVKQLSSKS---RQGNREFVNEIGMI 726
I N+F +G GGFG VY +D G + A+K L K +QG +NE M+
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 727 S 727
S
Sbjct: 244 S 244
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 671 IKAATNNFDPANKVGEGGFGSVYKGILSD-GTVIAVKQLSSKS---RQGNREFVNEIGMI 726
I N+F +G GGFG VY +D G + A+K L K +QG +NE M+
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 727 S 727
S
Sbjct: 244 S 244
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 671 IKAATNNFDPANKVGEGGFGSVYKGILSD-GTVIAVKQLSSKS---RQGNREFVNEIGMI 726
I N+F +G GGFG VY +D G + A+K L K +QG +NE M+
Sbjct: 183 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 242
Query: 727 S 727
S
Sbjct: 243 S 243
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 17/131 (12%)
Query: 676 NNFDPANKVGEGGFGSVYK-GILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQ----Q 730
+F +++G G +G V+K DG + AVK+ S R G ++ ++ + + Q
Sbjct: 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFR-GPKDRARKLAEVGSHEKVGQ 115
Query: 731 HPNLVKLYGCCVEGNQLLLVYEY----MKNNC------LSRA-IFGKLRIFHISIYATFP 779
HP V+L EG L L E ++ +C L A ++G LR +++
Sbjct: 116 HPCCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHS 175
Query: 780 QGNIQILIISA 790
QG + + + A
Sbjct: 176 QGLVHLDVKPA 186
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 11/84 (13%)
Query: 677 NFDPANKVGEGGFGSV--YKGILSDGTVIAVK-----QLSSKSRQGNREFVNEIGMISAQ 729
N+ +G+G F V + IL+ G +A+K QL+ S Q + E+ ++
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILT-GREVAIKIIDKTQLNPTSLQ---KLFREVRIMKIL 71
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEY 753
HPN+VKL+ L L+ EY
Sbjct: 72 NHPNIVKLFEVIETEKTLYLIMEY 95
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 31.2 bits (69), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 11/84 (13%)
Query: 677 NFDPANKVGEGGFGSV--YKGILSDGTVIAVK-----QLSSKSRQGNREFVNEIGMISAQ 729
N+ +G+G F V + IL+ G +A+K QL+ S Q + E+ ++
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILT-GREVAIKIIDKTQLNPTSLQ---KLFREVRIMKIL 68
Query: 730 QHPNLVKLYGCCVEGNQLLLVYEY 753
HPN+VKL+ L L+ EY
Sbjct: 69 NHPNIVKLFEVIETEKTLYLIMEY 92
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 10/93 (10%)
Query: 684 VGEGGFGSVYKGILSDGTVI-AVKQLS-SKSRQGNREFVN----EIGMISAQQHPNLVKL 737
+G+G +G V I + I A+K ++ +K RQ N + V E+ ++ HPN+ +L
Sbjct: 34 IGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARL 93
Query: 738 YGCCVEGNQLLLVYEYMKNNCLSRAIFGKLRIF 770
Y + + LV E C + KL +F
Sbjct: 94 YEVYEDEQYICLVMEL----CHGGHLLDKLNVF 122
>pdb|1M0Z|A Chain A, Crystal Structure Of The Von Willebrand Factor Binding
Domain Of Glycoprotein Ib Alpha
pdb|1M0Z|B Chain B, Crystal Structure Of The Von Willebrand Factor Binding
Domain Of Glycoprotein Ib Alpha
Length = 290
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 52/119 (43%), Gaps = 9/119 (7%)
Query: 106 GTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQLVELSVMGNRLSGPFPKVLTNITTL 165
GTLP L LDLS N L L L V NRL+ L + L
Sbjct: 74 GTLPV-------LGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGEL 126
Query: 166 KNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTK-LTNLNDLRISDNNF 223
+ L ++GN P + L+KL L++N T ELPA L L NL+ L + +N+
Sbjct: 127 QELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLT-ELPAGLLNGLENLDTLLLQENSL 184
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 44/112 (39%), Gaps = 10/112 (8%)
Query: 664 GLYTLRQIKAATNNFDPANKVGEGGFGSVYKGILSD----GTVIAVKQLSS---KSRQGN 716
G++ ++ + +G+G FG V IL G AVK +S K +
Sbjct: 20 GMFVQHSTAIFSDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDK 76
Query: 717 REFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFGKLR 768
+ E+ ++ HPN++KLY + LV E L I + R
Sbjct: 77 ESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR 128
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 46/114 (40%), Gaps = 6/114 (5%)
Query: 664 GLYTLRQIKAATNNFDPANKVGEGGFGSVY--KGILSDGTVIAVKQLSS---KSRQGNRE 718
G++ ++ + +G+G FG V K ++ G AVK +S K +
Sbjct: 14 GMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKES 72
Query: 719 FVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFGKLRIFHI 772
+ E+ ++ HPN++KLY + LV E L I + R +
Sbjct: 73 LLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV 126
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/82 (21%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 675 TNNFDPANKVGEGGFGSVY----KGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQ 730
++ + K+G G +G V K ++ + +K+ S + + ++E+ ++
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 79
Query: 731 HPNLVKLYGCCVEGNQLLLVYE 752
HPN++KLY + LV E
Sbjct: 80 HPNIMKLYEFFEDKRNYYLVME 101
>pdb|1P9A|G Chain G, Crystal Structure Of N-terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-alpha At 1.7 Angstrom
Resolution
pdb|1QYY|A Chain A, Crystal Structure Of N-Terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-Alpha At 2.8 Angstrom
Resolution
pdb|1QYY|G Chain G, Crystal Structure Of N-Terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-Alpha At 2.8 Angstrom
Resolution
Length = 290
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 53/119 (44%), Gaps = 9/119 (7%)
Query: 106 GTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQLVELSVMGNRLSGPFPKVLTNITTL 165
GTLP L LDLS N L L L V NRL+ L + L
Sbjct: 74 GTLPV-------LGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGEL 126
Query: 166 KNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTK-LTNLNDLRISDNNF 223
+ L ++GN P + L+KL L++N+ T ELPA L L NL+ L + +N+
Sbjct: 127 QELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT-ELPAGLLNGLENLDTLLLQENSL 184
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 4/92 (4%)
Query: 676 NNFDPANKVGEGGFGSVYKGI-LSDGTVIAVKQLSSKS--RQGNREFV-NEIGMISAQQH 731
+F +GEG F +V L+ A+K L + ++ +V E ++S H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 732 PNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAI 763
P VKLY C + +L Y KN L + I
Sbjct: 97 PFFVKLYFCFQDDEKLYFGLSYAKNGELLKYI 128
>pdb|1M10|B Chain B, Crystal Structure Of The Complex Of Glycoprotein Ib Alpha
And The Von Willebrand Factor A1 Domain
Length = 290
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 52/119 (43%), Gaps = 9/119 (7%)
Query: 106 GTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQLVELSVMGNRLSGPFPKVLTNITTL 165
GTLP L LDLS N L L L V NRL+ L + L
Sbjct: 74 GTLPV-------LGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGEL 126
Query: 166 KNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTK-LTNLNDLRISDNNF 223
+ L ++GN P + L+KL L++N T ELPA L L NL+ L + +N+
Sbjct: 127 QELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLT-ELPAGLLNGLENLDTLLLQENSL 184
>pdb|2R9U|A Chain A, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|B Chain B, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|C Chain C, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|D Chain D, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
Length = 174
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 28/61 (45%)
Query: 163 TTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNN 222
T + L + N T P L+NLQ+L +SN T KLT L L ++DN+
Sbjct: 33 TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNH 92
Query: 223 F 223
Sbjct: 93 L 93
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 643 KGCLGGKVSADKELRGL---DLQ-TGLYTLRQIKAATNNFDPANKVGEGGFGSVYKGI-L 697
+G L K+++ LR DL T L ++ + + + +G GGFGSVY GI +
Sbjct: 14 QGPLLSKINSLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRV 73
Query: 698 SDGTVIAVKQLS 709
SD +A+K +
Sbjct: 74 SDNLPVAIKHVE 85
>pdb|1SQ0|B Chain B, Crystal Structure Of The Complex Of The Wild-Type Von
Willebrand Factor A1 Domain And Glycoprotein Ib Alpha At
2.6 Angstrom Resolution
Length = 288
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 52/119 (43%), Gaps = 9/119 (7%)
Query: 106 GTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQLVELSVMGNRLSGPFPKVLTNITTL 165
GTLP L LDLS N L L L V NRL+ L + L
Sbjct: 74 GTLPV-------LGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGEL 126
Query: 166 KNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTK-LTNLNDLRISDNNF 223
+ L ++GN P + L+KL L++N T ELPA L L NL+ L + +N+
Sbjct: 127 QELYLKGNELKTLPPGLLTPTPKLEKLSLANNDLT-ELPAGLLNGLENLDTLLLQENSL 184
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 54/128 (42%), Gaps = 21/128 (16%)
Query: 276 FPKLDKMNLKTLILTKCLIHGEIP---------------DYIGD-MTKLKNIDLSFNNLT 319
+ +L ++NL LTK + G +P +G + L +D+SFN LT
Sbjct: 54 YTRLTQLNLDRCELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLT 113
Query: 320 GGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIFNSNKNVDISLNNFTWESSDPIECPRGSV 379
L + +YL GN+L P + + K +SL N +D E P G +
Sbjct: 114 SLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLAN-----NDLTELPAGLL 168
Query: 380 NLVESYSS 387
N +E+ +
Sbjct: 169 NGLENLDT 176
>pdb|1OOK|G Chain G, Crystal Structure Of The Complex Of Platelet Receptor
Gpib-alpha And Human Alpha-thrombin
Length = 290
Score = 30.8 bits (68), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 53/119 (44%), Gaps = 9/119 (7%)
Query: 106 GTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQLVELSVMGNRLSGPFPKVLTNITTL 165
GTLP L LDLS N L L L V NRL+ L + L
Sbjct: 74 GTLPV-------LGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGEL 126
Query: 166 KNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTK-LTNLNDLRISDNNF 223
+ L ++GN P + L+KL L++N+ T ELPA L L NL+ L + +N+
Sbjct: 127 QELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT-ELPAGLLNGLENLDTLLLQENSL 184
Score = 29.3 bits (64), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 54/130 (41%), Gaps = 25/130 (19%)
Query: 276 FPKLDKMNLKTLILTKCLIHGEIP---------------DYIGD-MTKLKNIDLSFNNLT 319
+ +L ++NL LTK + G +P +G + L +D+SFN LT
Sbjct: 54 YTRLTQLNLDRAELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLT 113
Query: 320 GGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIFNSNKNVDISL--NNFTWESSDPIECPRG 377
L + +YL GN+L P + + K +SL NN T E P G
Sbjct: 114 SLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT-------ELPAG 166
Query: 378 SVNLVESYSS 387
+N +E+ +
Sbjct: 167 LLNGLENLDT 176
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 30.8 bits (68), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 45/115 (39%), Gaps = 8/115 (6%)
Query: 664 GLYTLRQIKAATNNFDPANKVGEGGFGSVYKGILSD---GTVIAVKQLSS---KSRQGNR 717
G++ ++ + +G+G FG V + D G AVK +S K +
Sbjct: 37 GMFVQHSTAIFSDRYKGQRVLGKGSFGEVI--LCKDKITGQECAVKVISKRQVKQKTDKE 94
Query: 718 EFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFGKLRIFHI 772
+ E+ ++ HPN++KLY + LV E L I + R +
Sbjct: 95 SLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV 149
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 30.8 bits (68), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 45/115 (39%), Gaps = 8/115 (6%)
Query: 664 GLYTLRQIKAATNNFDPANKVGEGGFGSVYKGILSD---GTVIAVKQLSS---KSRQGNR 717
G++ ++ + +G+G FG V + D G AVK +S K +
Sbjct: 38 GMFVQHSTAIFSDRYKGQRVLGKGSFGEVI--LCKDKITGQECAVKVISKRQVKQKTDKE 95
Query: 718 EFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFGKLRIFHI 772
+ E+ ++ HPN++KLY + LV E L I + R +
Sbjct: 96 SLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV 150
>pdb|3A79|A Chain A, Crystal Structure Of Tlr2-Tlr6-Pam2csk4 Complex
pdb|3A7B|A Chain A, Crystal Structure Of Tlr2-Streptococcus Pneumoniae
Lipoteichoic Acid Complex
pdb|3A7C|A Chain A, Crystal Structure Of Tlr2-Pe-Dtpa Complex
Length = 580
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 1/107 (0%)
Query: 165 LKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFS 224
+K+L + N T D+R NLQ LIL S+ L +L L +SDN+ S
Sbjct: 54 MKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLS 113
Query: 225 GKIPEFIGKWKKIQKLHIQGSSLEG-PIPASISALTSLTDLRISDLK 270
+ G ++ L++ G+ + + + LT+L LRI +++
Sbjct: 114 SLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVE 160
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/110 (19%), Positives = 45/110 (40%), Gaps = 4/110 (3%)
Query: 675 TNNFDPANKVGEGGFGSVY----KGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQ 730
++ + K+G G +G V K ++ + +K+ S + + ++E+ ++
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 62
Query: 731 HPNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQ 780
HPN++KLY + LV E + L I + + + Q
Sbjct: 63 HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQ 112
>pdb|3PMH|G Chain G, Mechanism Of Sulfotyrosine-Mediated Glycoprotein Ib
Interaction With Two Distinct Alpha-Thrombin Sites
Length = 290
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 53/119 (44%), Gaps = 9/119 (7%)
Query: 106 GTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQLVELSVMGNRLSGPFPKVLTNITTL 165
GTLP L LDLS N L L L V NRL+ L + L
Sbjct: 74 GTLPV-------LGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGEL 126
Query: 166 KNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTK-LTNLNDLRISDNNF 223
+ L ++GN P + L+KL L++N+ T ELPA L L NL+ L + +N+
Sbjct: 127 QELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT-ELPAGLLNGLENLDTLLLQENSL 184
Score = 29.3 bits (64), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 54/130 (41%), Gaps = 25/130 (19%)
Query: 276 FPKLDKMNLKTLILTKCLIHGEIP---------------DYIGD-MTKLKNIDLSFNNLT 319
+ +L ++NL LTK + G +P +G + L +D+SFN LT
Sbjct: 54 YTRLTQLNLDRAELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLT 113
Query: 320 GGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIFNSNKNVDISL--NNFTWESSDPIECPRG 377
L + +YL GN+L P + + K +SL NN T E P G
Sbjct: 114 SLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT-------ELPAG 166
Query: 378 SVNLVESYSS 387
+N +E+ +
Sbjct: 167 LLNGLENLDT 176
>pdb|1P8V|A Chain A, Crystal Structure Of The Complex Of Platelet Receptor
Gpib-alpha And Alpha-thrombin At 2.6a
Length = 279
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 53/119 (44%), Gaps = 9/119 (7%)
Query: 106 GTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQLVELSVMGNRLSGPFPKVLTNITTL 165
GTLP L LDLS N L L L V NRL+ L + L
Sbjct: 74 GTLPV-------LGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGEL 126
Query: 166 KNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTK-LTNLNDLRISDNNF 223
+ L ++GN P + L+KL L++N+ T ELPA L L NL+ L + +N+
Sbjct: 127 QELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT-ELPAGLLNGLENLDTLLLQENSL 184
Score = 29.3 bits (64), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 54/130 (41%), Gaps = 25/130 (19%)
Query: 276 FPKLDKMNLKTLILTKCLIHGEIP---------------DYIGD-MTKLKNIDLSFNNLT 319
+ +L ++NL LTK + G +P +G + L +D+SFN LT
Sbjct: 54 YTRLTQLNLDRCELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLT 113
Query: 320 GGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIFNSNKNVDISL--NNFTWESSDPIECPRG 377
L + +YL GN+L P + + K +SL NN T E P G
Sbjct: 114 SLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT-------ELPAG 166
Query: 378 SVNLVESYSS 387
+N +E+ +
Sbjct: 167 LLNGLENLDT 176
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 2/81 (2%)
Query: 675 TNNFDPANKVGEGGFGSVYKGI-LSDGTVIAVKQLSSKSRQGNREFVN-EIGMISAQQHP 732
++D +GEG G V + +AVK + K E + EI + H
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 733 NLVKLYGCCVEGNQLLLVYEY 753
N+VK YG EGN L EY
Sbjct: 65 NVVKFYGHRREGNIQYLFLEY 85
>pdb|2Z81|A Chain A, Crystal Structure Of The Tlr1-tlr2 Heterodimer Induced By
Binding Of A Tri-acylated Lipopeptide
pdb|2Z82|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 549
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 1/107 (0%)
Query: 165 LKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFS 224
+K+L + N T D+R NLQ LIL S+ L +L L +SDN+ S
Sbjct: 28 MKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLS 87
Query: 225 GKIPEFIGKWKKIQKLHIQGSSLEG-PIPASISALTSLTDLRISDLK 270
+ G ++ L++ G+ + + + LT+L LRI +++
Sbjct: 88 SLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVE 134
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 30.4 bits (67), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 684 VGEGGFGSVYKGI-LSDGTVIAVKQLS 709
+G GGFGSVY GI +SD +A+K +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVE 70
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 684 VGEGGFGSVYKGI-LSDGTVIAVKQLS 709
+G GGFGSVY GI +SD +A+K +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVE 70
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 684 VGEGGFGSVYKGI-LSDGTVIAVKQLS 709
+G GGFGSVY GI +SD +A+K +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVE 71
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 684 VGEGGFGSVYKGI-LSDGTVIAVKQLS 709
+G GGFGSVY GI +SD +A+K +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVE 71
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 684 VGEGGFGSVYKGI-LSDGTVIAVKQLS 709
+G GGFGSVY GI +SD +A+K +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVE 70
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 684 VGEGGFGSVYKGI-LSDGTVIAVKQLS 709
+G GGFGSVY GI +SD +A+K +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVE 71
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 684 VGEGGFGSVYKGI-LSDGTVIAVKQLS 709
+G GGFGSVY GI +SD +A+K +
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVE 57
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 684 VGEGGFGSVYKGI-LSDGTVIAVKQLS 709
+G GGFGSVY GI +SD +A+K +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVE 71
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 684 VGEGGFGSVYKGI-LSDGTVIAVKQLS 709
+G GGFGSVY GI +SD +A+K +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVE 70
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 30.4 bits (67), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 684 VGEGGFGSVYKGI-LSDGTVIAVKQLS 709
+G GGFGSVY GI +SD +A+K +
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVE 57
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 30.4 bits (67), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 684 VGEGGFGSVYKGI-LSDGTVIAVKQLS 709
+G GGFGSVY GI +SD +A+K +
Sbjct: 64 LGSGGFGSVYSGIRVSDNLPVAIKHVE 90
>pdb|3T6Q|A Chain A, Crystal Structure Of Mouse Rp105MD-1 Complex
pdb|3T6Q|B Chain B, Crystal Structure Of Mouse Rp105MD-1 Complex
Length = 606
Score = 30.4 bits (67), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 136/339 (40%), Gaps = 39/339 (11%)
Query: 88 SSATCHVVTIALKAQNLTGT----LPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLV 142
SS T H + L+ +LT T LP+ L L LK+L LS N ++ L
Sbjct: 270 SSNTFHCFS-GLQELDLTATHLSELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLT 328
Query: 143 ELSVMGNRLSGPF-PKVLTNITTLKNLSIEGNLFTGS--IPPDIRKLINLQKLILSSNSF 199
LS+ GN L N+ L+ L + + S +R L +LQ L LS N
Sbjct: 329 HLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNE- 387
Query: 200 TGELPAELTKLTNLNDLRISDNNFSG-KIPEFIGKWKKIQKLHIQGSSLEGPIPASISAL 258
L + L + D F+ K+ + ++ + L + S +S
Sbjct: 388 --PLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLF 445
Query: 259 TSLTDLRISDLKGSESAFPK--LDKMN-------LKTLILTKCLIHGEIPDYIGDMTKLK 309
L L+ +L+G+ FPK + K N L+ L+L+ C + + +
Sbjct: 446 DGLPALQHLNLQGNH--FPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMN 503
Query: 310 NIDLSFNNLTGGIPTTFEKLAKTNFMYL--TGNKLTGPVPKY--IFNSNKNVDISLNNFT 365
++DLS N LT ++ E L+ +YL N ++ +P I + + +++ N
Sbjct: 504 HVDLSHNRLTS---SSIEALSHLKGIYLNLASNHISIILPSLLPILSQQRTINLRQN--- 557
Query: 366 WESSDPIECPRGSVNLVESYSSPRNKLDKVHPCLRQNFP 404
P++C ++ +E Y KL+ L +N P
Sbjct: 558 -----PLDCTCSNIYFLEWYKENMQKLEDTEDTLCENPP 591
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 30.4 bits (67), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 684 VGEGGFGSVYKGI-LSDGTVIAVKQLS 709
+G GGFGSVY GI +SD +A+K +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVE 43
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 30.4 bits (67), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 684 VGEGGFGSVYKGI-LSDGTVIAVKQLS 709
+G GGFGSVY GI +SD +A+K +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVE 58
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 30.4 bits (67), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 684 VGEGGFGSVYKGI-LSDGTVIAVKQLS 709
+G GGFGSVY GI +SD +A+K +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVE 58
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 30.4 bits (67), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 684 VGEGGFGSVYKGI-LSDGTVIAVKQLS 709
+G GGFGSVY GI +SD +A+K +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVE 58
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 30.4 bits (67), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 684 VGEGGFGSVYKGI-LSDGTVIAVKQLS 709
+G GGFGSVY GI +SD +A+K +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVE 43
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 30.4 bits (67), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 684 VGEGGFGSVYKGI-LSDGTVIAVKQLS 709
+G GGFGSVY GI +SD +A+K +
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVE 42
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 30.4 bits (67), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 684 VGEGGFGSVYKGI-LSDGTVIAVKQLS 709
+G GGFGSVY GI +SD +A+K +
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVE 42
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 30.4 bits (67), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 684 VGEGGFGSVYKGI-LSDGTVIAVKQLS 709
+G GGFGSVY GI +SD +A+K +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVE 38
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 30.4 bits (67), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 684 VGEGGFGSVYKGI-LSDGTVIAVKQLS 709
+G GGFGSVY GI +SD +A+K +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVE 38
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 30.4 bits (67), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 668 LRQIKAATNNFDPANKVGEGGFGSVYKGI-LSDGTVIAVKQLS 709
+++ + + + +G GGFGSVY GI +SD +A+K +
Sbjct: 23 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE 65
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 30.4 bits (67), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 684 VGEGGFGSVYKGI-LSDGTVIAVKQLS 709
+G GGFGSVY GI +SD +A+K +
Sbjct: 15 LGSGGFGSVYSGIRVSDNLPVAIKHVE 41
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 30.4 bits (67), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 684 VGEGGFGSVYKGI-LSDGTVIAVKQLS 709
+G GGFGSVY GI +SD +A+K +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVE 43
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 30.4 bits (67), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 684 VGEGGFGSVYKGI-LSDGTVIAVKQLS 709
+G GGFGSVY GI +SD +A+K +
Sbjct: 51 LGSGGFGSVYSGIRVSDNLPVAIKHVE 77
>pdb|1U0N|D Chain D, The Ternary Von Willebrand Factor A1-Glycoprotein Ibalpha-
Botrocetin Complex
Length = 265
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 52/119 (43%), Gaps = 9/119 (7%)
Query: 106 GTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQLVELSVMGNRLSGPFPKVLTNITTL 165
GTLP L LDLS N L L L V NRL+ L + L
Sbjct: 74 GTLPV-------LGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGEL 126
Query: 166 KNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTK-LTNLNDLRISDNNF 223
+ L ++GN P + L+KL L++N T ELPA L L NL+ L + +N+
Sbjct: 127 QELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLT-ELPAGLLNGLENLDTLLLQENSL 184
>pdb|1GWB|B Chain B, Structure Of Glycoprotein 1b
pdb|1GWB|A Chain A, Structure Of Glycoprotein 1b
Length = 281
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 53/119 (44%), Gaps = 9/119 (7%)
Query: 106 GTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQLVELSVMGNRLSGPFPKVLTNITTL 165
GTLP L LDLS N L L L V NRL+ L + L
Sbjct: 75 GTLPV-------LGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGEL 127
Query: 166 KNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTK-LTNLNDLRISDNNF 223
+ L ++GN P + L+KL L++N+ T ELPA L L NL+ L + +N+
Sbjct: 128 QELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT-ELPAGLLNGLENLDTLLLQENSL 185
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 684 VGEGGFGSVYKGI-LSDGTVIAVKQLS 709
+G GGFGSVY GI +SD +A+K +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVE 38
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 30.0 bits (66), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 8/89 (8%)
Query: 669 RQIKAATNNFDPANKVGEGGFGSVYKGILSD----GTVIAVKQLSSKSRQGNREFV-NEI 723
+Q + F+ +G G F V +L++ G + AVK + K+ +G + NEI
Sbjct: 15 KQAEDIKKIFEFKETLGTGAFSEV---VLAEEKATGKLFAVKCIPKKALKGKESSIENEI 71
Query: 724 GMISAQQHPNLVKLYGCCVEGNQLLLVYE 752
++ +H N+V L N L LV +
Sbjct: 72 AVLRKIKHENIVALEDIYESPNHLYLVMQ 100
>pdb|3O6N|A Chain A, Crystal Structure Of Apl1 Leucine-Rich Repeat Domain
Length = 390
Score = 30.0 bits (66), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 68/162 (41%), Gaps = 20/162 (12%)
Query: 187 INLQKLILSSNSFTGELPAEL------TKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKL 240
+N QK++ NS +LPA L +L NLNDL+I + + IQKL
Sbjct: 44 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYA-----FAYAHTIQKL 98
Query: 241 HIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPK---LDKMNLKTLILTKCLIHGE 297
++ +++ P + LT L + + S+ P+ + L TL ++ +
Sbjct: 99 YMGFNAIRYLPPHVFQNVPLLTVLVLE--RNDLSSLPRGIFHNTPKLTTLSMSNNNLERI 156
Query: 298 IPDYIGDMTKLKNIDLSFNNLT----GGIPTTFEKLAKTNFM 335
D T L+N+ LS N LT IP+ F N +
Sbjct: 157 EDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLL 198
>pdb|3P72|A Chain A, Structure Of Platelet Glycoprotein 1b Alpha With A Bound
Peptide Inhibitor
Length = 269
Score = 30.0 bits (66), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 52/119 (43%), Gaps = 9/119 (7%)
Query: 106 GTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQLVELSVMGNRLSGPFPKVLTNITTL 165
GTLP L LDLS N L L L V NRL+ L + L
Sbjct: 74 GTLPV-------LGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGEL 126
Query: 166 KNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTK-LTNLNDLRISDNNF 223
+ L ++GN P + L+KL L++N T ELPA L L NL+ L + +N+
Sbjct: 127 QELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLT-ELPAGLLNGLENLDTLLLQENSL 184
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 29.6 bits (65), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Query: 684 VGEGGFGSVYKGIL---SDGT--VIAVKQLSSKSRQGNRE-FVNEIGMISAQQHPNLVKL 737
+GEG FG V +DGT ++AVK L R + EI ++ H ++VK
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 738 YGCCVEGNQ--LLLVYEYM 754
GCC + + + LV EY+
Sbjct: 76 KGCCEDQGEKSVQLVMEYV 94
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 29.6 bits (65), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Query: 684 VGEGGFGSVYKGIL---SDGT--VIAVKQLSSKSRQGNRE-FVNEIGMISAQQHPNLVKL 737
+GEG FG V +DGT ++AVK L R + EI ++ H ++VK
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 738 YGCCVEGNQ--LLLVYEYM 754
GCC + + + LV EY+
Sbjct: 77 KGCCEDQGEKSVQLVMEYV 95
>pdb|1E7P|A Chain A, Quinol:fumarate Reductase From Wolinella Succinogenes
pdb|1E7P|D Chain D, Quinol:fumarate Reductase From Wolinella Succinogenes
pdb|2BS3|A Chain A, Glu C180-> Gln Variant Quinol:fumarate Reductase From
Wolinella Succinogenes
pdb|2BS3|D Chain D, Glu C180-> Gln Variant Quinol:fumarate Reductase From
Wolinella Succinogenes
pdb|2BS4|A Chain A, Glu C180-> Ile Variant Quinol:fumarate Reductase From
Wolinella Succinogenes
pdb|2BS4|D Chain D, Glu C180-> Ile Variant Quinol:fumarate Reductase From
Wolinella Succinogenes
pdb|1E7P|G Chain G, Quinol:fumarate Reductase From Wolinella Succinogenes
pdb|1E7P|J Chain J, Quinol:fumarate Reductase From Wolinella Succinogenes
Length = 656
Score = 29.6 bits (65), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 26/107 (24%)
Query: 684 VGEGGFGSVYK----GILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHP------N 733
+ GG+G +YK ++ +GT A+ + ++ GN E V Q HP
Sbjct: 214 IATGGYGRIYKNTTNAVVCEGTGTAIALETGIAQLGNMEAV--------QFHPTPLFPSG 265
Query: 734 LVKLYGCC--------VEGNQLLLVYEYMKNNCLSRAIFGKLRIFHI 772
++ GC V+G++ + YE K SR + + I HI
Sbjct: 266 ILLTEGCRGDGGILRDVDGHRFMPDYEPEKKELASRDVVSRRMIEHI 312
>pdb|1QLB|A Chain A, Respiratory Complex Ii-Like Fumarate Reductase From
Wolinella Succinogenes
pdb|1QLB|D Chain D, Respiratory Complex Ii-Like Fumarate Reductase From
Wolinella Succinogenes
Length = 656
Score = 29.6 bits (65), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 26/107 (24%)
Query: 684 VGEGGFGSVYK----GILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPN------ 733
+ GG+G +YK ++ +GT A+ + ++ GN E V Q HP
Sbjct: 214 IATGGYGRIYKNTTNAVVCEGTGTAIALETGIAQLGNMEAV--------QFHPTPLFPSG 265
Query: 734 LVKLYGCC--------VEGNQLLLVYEYMKNNCLSRAIFGKLRIFHI 772
++ GC V+G++ + YE K SR + + I HI
Sbjct: 266 ILLTEGCRGDGGILRDVDGHRFMPDYEPEKKELASRDVVSRRMIEHI 312
>pdb|2BS2|A Chain A, Quinol:fumarate Reductase From Wolinella Succinogenes
pdb|2BS2|D Chain D, Quinol:fumarate Reductase From Wolinella Succinogenes
Length = 660
Score = 29.6 bits (65), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 26/107 (24%)
Query: 684 VGEGGFGSVYK----GILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPN------ 733
+ GG+G +YK ++ +GT A+ + ++ GN E V Q HP
Sbjct: 214 IATGGYGRIYKNTTNAVVCEGTGTAIALETGIAQLGNMEAV--------QFHPTPLFPSG 265
Query: 734 LVKLYGCC--------VEGNQLLLVYEYMKNNCLSRAIFGKLRIFHI 772
++ GC V+G++ + YE K SR + + I HI
Sbjct: 266 ILLTEGCRGDGGILRDVDGHRFMPDYEPEKKELASRDVVSRRMIEHI 312
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 29.6 bits (65), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Query: 682 NKVGEGGFGSVY-KGILSDGTVIAVKQLSSKSRQGNREFVN-EIGMISAQQHPNLVKLYG 739
K+G G FG V+ S G +K ++ Q E + EI ++ + HPN++K++
Sbjct: 28 RKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFE 87
Query: 740 CCVEGNQLLLVYEYMK-NNCLSRAIFGKLR 768
+ + + +V E + L R + + R
Sbjct: 88 VFEDYHNMYIVMETCEGGELLERIVSAQAR 117
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 29.3 bits (64), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 17/72 (23%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 684 VGEGGFGSVYK---GILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGC 740
+G+G FG V K I + V +S + + E+ ++ HPN++KL+
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 741 CVEGNQLLLVYE 752
+ + +V E
Sbjct: 90 LEDSSSFYIVGE 101
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 29.3 bits (64), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 39/94 (41%), Gaps = 6/94 (6%)
Query: 684 VGEGGFGSVY--KGILSDGTVIAVKQLSS---KSRQGNREFVNEIGMISAQQHPNLVKLY 738
+G+G FG V K ++ G AVK +S K + + E+ ++ HPN+ KLY
Sbjct: 34 LGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLY 92
Query: 739 GCCVEGNQLLLVYEYMKNNCLSRAIFGKLRIFHI 772
+ LV E L I + R +
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV 126
>pdb|2BNH|A Chain A, Porcine Ribonuclease Inhibitor
pdb|1DFJ|I Chain I, Ribonuclease Inhibitor Complexed With Ribonuclease A
Length = 457
Score = 29.3 bits (64), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 61/153 (39%), Gaps = 23/153 (15%)
Query: 189 LQKLILSSNSFT----GELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQG 244
+QKL L + S T G LP+ L L L +L +SDN + + + H++
Sbjct: 83 IQKLSLQNCSLTEAGCGVLPSTLRSLPTLRELHLSDNPLGDAGLRLLCEGLLDPQCHLEK 142
Query: 245 SSLE---------GPIPASISALTSLTDLRISDLKGSESAFPKLDK------MNLKTLIL 289
LE P+ + + A +L +L +S+ E+ L + L+TL L
Sbjct: 143 LQLEYCRLTAASCEPLASVLRATRALKELTVSNNDIGEAGARVLGQGLADSACQLETLRL 202
Query: 290 TKC-LIHGEIPDYIG---DMTKLKNIDLSFNNL 318
C L D G L+ +DL N L
Sbjct: 203 ENCGLTPANCKDLCGIVASQASLRELDLGSNGL 235
>pdb|3TWI|D Chain D, Variable Lymphocyte Receptor Recognition Of The
Immunodominant Glycoprotein Of Bacillus Anthracis Spores
pdb|3TWI|E Chain E, Variable Lymphocyte Receptor Recognition Of The
Immunodominant Glycoprotein Of Bacillus Anthracis Spores
pdb|3TWI|F Chain F, Variable Lymphocyte Receptor Recognition Of The
Immunodominant Glycoprotein Of Bacillus Anthracis Spores
Length = 179
Score = 29.3 bits (64), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 299 PDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIFNSNKNV- 357
P +T+L ++L+ N LT F+KL K + L N+L +P +F++ K++
Sbjct: 57 PGVFDSLTQLTYLNLAVNQLTALPVGVFDKLTKLTHLALHINQLKS-IPMGVFDNLKSLT 115
Query: 358 DISLNNFTW--ESSD 370
I L N W E SD
Sbjct: 116 HIYLFNNPWDCECSD 130
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,293,990
Number of Sequences: 62578
Number of extensions: 1004200
Number of successful extensions: 3384
Number of sequences better than 100.0: 680
Number of HSP's better than 100.0 without gapping: 237
Number of HSP's successfully gapped in prelim test: 443
Number of HSP's that attempted gapping in prelim test: 2629
Number of HSP's gapped (non-prelim): 836
length of query: 799
length of database: 14,973,337
effective HSP length: 107
effective length of query: 692
effective length of database: 8,277,491
effective search space: 5728023772
effective search space used: 5728023772
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)