Query 003737
Match_columns 799
No_of_seqs 705 out of 5010
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 02:25:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003737.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003737hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ogq_A PGIP-2, polygalacturona 100.0 4.9E-41 1.7E-45 362.0 19.8 294 35-366 2-306 (313)
2 4eco_A Uncharacterized protein 100.0 5E-39 1.7E-43 379.7 24.8 326 36-372 27-476 (636)
3 4ecn_A Leucine-rich repeat pro 100.0 8.2E-38 2.8E-42 376.4 28.8 325 33-372 263-716 (876)
4 3rgz_A Protein brassinosteroid 100.0 4.1E-38 1.4E-42 380.2 24.4 317 33-372 6-363 (768)
5 3rgz_A Protein brassinosteroid 100.0 1.6E-35 5.4E-40 357.6 23.5 277 94-371 370-723 (768)
6 3v47_A TOLL-like receptor 5B a 100.0 4.7E-33 1.6E-37 315.5 23.9 281 91-371 29-390 (455)
7 4eco_A Uncharacterized protein 100.0 5.2E-33 1.8E-37 328.2 17.3 262 103-372 194-507 (636)
8 2id5_A Lingo-1, leucine rich r 100.0 1E-31 3.5E-36 306.6 21.9 280 91-370 31-314 (477)
9 1ogq_A PGIP-2, polygalacturona 100.0 1.8E-32 6.2E-37 295.0 13.2 231 116-371 50-287 (313)
10 4fcg_A Uncharacterized protein 100.0 3.6E-32 1.2E-36 294.6 15.6 267 34-343 22-314 (328)
11 3j0a_A TOLL-like receptor 5; m 100.0 2.9E-30 9.9E-35 314.8 29.9 282 91-372 23-358 (844)
12 2id5_A Lingo-1, leucine rich r 100.0 2.4E-30 8.1E-35 295.3 23.3 275 91-365 55-333 (477)
13 3o6n_A APL1; leucine-rich repe 100.0 9.1E-30 3.1E-34 282.7 24.2 266 92-367 45-333 (390)
14 3oja_B Anopheles plasmodium-re 100.0 9.6E-30 3.3E-34 298.4 24.9 268 92-368 51-340 (597)
15 3v47_A TOLL-like receptor 5B a 100.0 1E-29 3.4E-34 288.1 23.7 272 97-372 15-367 (455)
16 4g8a_A TOLL-like receptor 4; l 100.0 1.6E-29 5.4E-34 298.3 25.0 136 91-226 51-188 (635)
17 3vq2_A TLR4, TOLL-like recepto 100.0 1.3E-29 4.4E-34 298.1 23.5 139 91-229 31-171 (606)
18 3t6q_A CD180 antigen; protein- 100.0 1.3E-29 4.4E-34 298.0 23.4 276 93-370 255-541 (606)
19 2z7x_B TOLL-like receptor 1, v 100.0 9.6E-30 3.3E-34 293.5 21.9 273 92-372 21-419 (520)
20 3t6q_A CD180 antigen; protein- 100.0 3.6E-29 1.2E-33 294.3 25.6 272 92-365 278-560 (606)
21 2z81_A CD282 antigen, TOLL-lik 100.0 1E-29 3.4E-34 295.3 19.7 274 92-366 26-424 (549)
22 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 4.2E-29 1.4E-33 291.0 24.7 273 92-372 52-448 (562)
23 4ecn_A Leucine-rich repeat pro 100.0 3.8E-29 1.3E-33 301.1 24.6 271 92-372 491-802 (876)
24 3vq2_A TLR4, TOLL-like recepto 100.0 7.6E-29 2.6E-33 291.5 24.7 279 92-372 56-493 (606)
25 1xku_A Decorin; proteoglycan, 100.0 2.7E-28 9.1E-33 264.5 25.3 264 92-365 31-306 (330)
26 2z80_A TOLL-like receptor 2, v 100.0 2.4E-29 8.1E-34 275.5 15.5 261 101-367 40-316 (353)
27 2z7x_B TOLL-like receptor 1, v 100.0 3.3E-28 1.1E-32 280.6 24.9 270 91-370 44-461 (520)
28 1ziw_A TOLL-like receptor 3; i 100.0 4E-28 1.4E-32 289.3 26.4 282 91-372 24-349 (680)
29 2ft3_A Biglycan; proteoglycan, 100.0 2.8E-28 9.5E-33 264.6 22.1 263 92-365 33-307 (332)
30 2z63_A TOLL-like receptor 4, v 100.0 5.5E-28 1.9E-32 281.8 25.9 138 92-229 28-167 (570)
31 1xku_A Decorin; proteoglycan, 100.0 6E-28 2E-32 261.7 24.2 266 91-363 51-330 (330)
32 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 5.5E-28 1.9E-32 281.5 25.0 269 94-371 33-422 (562)
33 2ft3_A Biglycan; proteoglycan, 100.0 7.3E-28 2.5E-32 261.3 22.6 264 92-363 54-331 (332)
34 1ziw_A TOLL-like receptor 3; i 100.0 1.3E-27 4.4E-32 284.9 26.6 274 92-365 329-622 (680)
35 3j0a_A TOLL-like receptor 5; m 100.0 7.7E-28 2.6E-32 293.4 24.3 277 91-367 47-377 (844)
36 2z63_A TOLL-like receptor 4, v 100.0 1.1E-27 3.6E-32 279.4 22.6 280 92-372 52-514 (570)
37 2z81_A CD282 antigen, TOLL-lik 100.0 7.8E-28 2.7E-32 279.3 20.7 120 91-210 49-171 (549)
38 2z66_A Variable lymphocyte rec 100.0 2.4E-28 8.1E-33 261.9 14.0 245 96-344 11-262 (306)
39 3o6n_A APL1; leucine-rich repe 100.0 5.4E-27 1.9E-31 260.3 24.7 249 113-367 42-310 (390)
40 3zyi_A Leucine-rich repeat-con 100.0 3.4E-27 1.2E-31 267.2 23.5 242 96-365 58-303 (452)
41 3oja_B Anopheles plasmodium-re 99.9 4.9E-27 1.7E-31 275.3 24.4 252 114-372 49-320 (597)
42 2z80_A TOLL-like receptor 2, v 99.9 6.8E-28 2.3E-32 263.9 15.3 255 92-347 52-318 (353)
43 1ozn_A Reticulon 4 receptor; N 99.9 2E-27 6.8E-32 252.0 18.2 251 95-371 14-267 (285)
44 4g8a_A TOLL-like receptor 4; l 99.9 8.8E-27 3E-31 274.7 24.7 155 96-253 35-191 (635)
45 3zyj_A Leucine-rich repeat-con 99.9 7.8E-27 2.7E-31 263.4 22.6 253 95-383 46-302 (440)
46 4fcg_A Uncharacterized protein 99.9 9.4E-27 3.2E-31 252.0 21.0 224 114-365 79-314 (328)
47 1wwl_A Monocyte differentiatio 99.9 1.1E-28 3.8E-33 265.4 5.3 241 93-343 44-309 (312)
48 4fmz_A Internalin; leucine ric 99.9 2.9E-26 1E-30 250.0 24.5 259 92-369 66-328 (347)
49 2z66_A Variable lymphocyte rec 99.9 2E-27 6.9E-32 254.6 14.4 258 91-349 27-293 (306)
50 3bz5_A Internalin-J, INLJ; leu 99.9 2.7E-26 9.4E-31 259.6 22.9 254 92-370 42-304 (457)
51 3zyi_A Leucine-rich repeat-con 99.9 5.3E-26 1.8E-30 257.5 23.3 227 119-372 57-286 (452)
52 4fmz_A Internalin; leucine ric 99.9 1.5E-25 5E-30 244.5 25.9 261 92-372 44-307 (347)
53 3zyj_A Leucine-rich repeat-con 99.9 5.6E-26 1.9E-30 256.3 22.8 227 119-372 46-275 (440)
54 1wwl_A Monocyte differentiatio 99.9 2.1E-28 7.3E-33 263.1 1.6 246 112-366 39-310 (312)
55 1o6v_A Internalin A; bacterial 99.9 2E-25 6.8E-30 253.7 25.9 257 92-369 68-326 (466)
56 1o6v_A Internalin A; bacterial 99.9 2.2E-25 7.4E-30 253.5 25.4 257 92-369 46-304 (466)
57 1ozn_A Reticulon 4 receptor; N 99.9 5.5E-26 1.9E-30 240.9 15.9 236 91-350 31-268 (285)
58 3bz5_A Internalin-J, INLJ; leu 99.9 7.2E-25 2.5E-29 247.9 23.9 251 92-367 64-333 (457)
59 3o53_A Protein LRIM1, AGAP0063 99.9 4.1E-27 1.4E-31 253.7 4.3 264 93-370 11-281 (317)
60 2z62_A TOLL-like receptor 4, v 99.9 4.2E-25 1.5E-29 232.9 19.4 227 98-347 13-241 (276)
61 1jl5_A Outer protein YOPM; leu 99.9 3.5E-25 1.2E-29 250.3 17.9 246 92-366 11-271 (454)
62 1jl5_A Outer protein YOPM; leu 99.9 2.5E-24 8.6E-29 243.3 24.6 245 93-372 132-379 (454)
63 2o6q_A Variable lymphocyte rec 99.9 1.5E-24 5.1E-29 228.1 21.0 212 81-345 8-220 (270)
64 3oja_A Leucine-rich immune mol 99.9 2.2E-25 7.5E-30 254.4 11.0 216 114-343 32-250 (487)
65 3o53_A Protein LRIM1, AGAP0063 99.9 8E-26 2.7E-30 243.6 3.3 244 92-349 34-282 (317)
66 3oja_A Leucine-rich immune mol 99.9 3.8E-25 1.3E-29 252.4 8.1 234 91-338 33-270 (487)
67 2z62_A TOLL-like receptor 4, v 99.9 8.8E-24 3E-28 222.8 17.3 208 92-323 28-241 (276)
68 3g06_A SSPH2 (leucine-rich rep 99.9 4E-24 1.4E-28 249.3 15.7 233 93-365 41-274 (622)
69 2o6q_A Variable lymphocyte rec 99.9 1.9E-22 6.4E-27 212.0 22.6 199 141-365 18-218 (270)
70 3rfs_A Internalin B, repeat mo 99.9 1.6E-23 5.6E-28 220.4 13.8 200 141-372 43-242 (272)
71 1p9a_G Platelet glycoprotein I 99.9 1.8E-22 6.3E-27 214.3 20.2 204 111-343 5-208 (290)
72 3rfs_A Internalin B, repeat mo 99.9 1.3E-22 4.5E-27 213.4 18.0 205 112-350 37-242 (272)
73 1z7x_W Ribonuclease inhibitor; 99.9 2.2E-25 7.6E-30 252.7 -3.8 275 93-367 86-413 (461)
74 4glp_A Monocyte differentiatio 99.9 2.2E-22 7.6E-27 215.9 16.9 222 116-343 64-307 (310)
75 2ast_B S-phase kinase-associat 99.9 1.2E-23 4.1E-28 228.1 5.6 253 93-372 48-313 (336)
76 3m19_A Variable lymphocyte rec 99.9 5.6E-22 1.9E-26 206.0 17.3 181 81-269 8-189 (251)
77 1p9a_G Platelet glycoprotein I 99.9 1.4E-21 4.7E-26 207.5 20.1 200 91-320 9-209 (290)
78 2xwt_C Thyrotropin receptor; s 99.9 7.5E-22 2.6E-26 203.4 16.6 202 107-340 25-236 (239)
79 1z7x_W Ribonuclease inhibitor; 99.9 2.4E-24 8E-29 244.3 -3.1 274 93-366 29-355 (461)
80 3m19_A Variable lymphocyte rec 99.9 1.6E-21 5.4E-26 202.6 18.4 209 141-376 16-231 (251)
81 2ast_B S-phase kinase-associat 99.9 4.6E-24 1.6E-28 231.5 -1.1 233 92-351 70-314 (336)
82 3goz_A Leucine-rich repeat-con 99.9 1.5E-23 5E-28 230.2 2.7 255 96-350 2-304 (362)
83 3g06_A SSPH2 (leucine-rich rep 99.9 6.3E-21 2.2E-25 222.4 23.4 240 92-371 61-303 (622)
84 2ca6_A RAN GTPase-activating p 99.9 2.3E-23 8E-28 230.7 0.7 240 107-346 23-319 (386)
85 2ca6_A RAN GTPase-activating p 99.9 4.9E-23 1.7E-27 228.1 2.7 238 132-369 24-320 (386)
86 4glp_A Monocyte differentiatio 99.9 1E-21 3.5E-26 210.7 12.9 223 93-320 65-308 (310)
87 2xwt_C Thyrotropin receptor; s 99.9 2.8E-21 9.4E-26 199.1 15.6 197 140-363 32-237 (239)
88 1h6u_A Internalin H; cell adhe 99.9 2.6E-21 9E-26 207.3 15.4 193 113-344 38-231 (308)
89 3goz_A Leucine-rich repeat-con 99.8 7.5E-23 2.6E-27 224.6 0.5 250 120-369 2-301 (362)
90 3cvr_A Invasion plasmid antige 99.8 4.3E-21 1.5E-25 221.1 11.9 217 55-330 35-254 (571)
91 4ay9_X Follicle-stimulating ho 99.8 1.6E-20 5.5E-25 205.0 15.6 238 96-363 13-257 (350)
92 4asz_A BDNF/NT-3 growth factor 99.8 8.4E-21 2.9E-25 201.4 11.1 124 676-799 13-146 (299)
93 2o6s_A Variable lymphocyte rec 99.8 6.3E-20 2.2E-24 184.6 16.9 147 96-245 11-158 (208)
94 1h6u_A Internalin H; cell adhe 99.8 5.5E-20 1.9E-24 197.0 17.3 189 141-366 43-231 (308)
95 4aoj_A High affinity nerve gro 99.8 1.8E-20 6.3E-25 201.6 12.1 124 676-799 41-176 (329)
96 2o6s_A Variable lymphocyte rec 99.8 2.7E-19 9.2E-24 180.0 17.6 181 119-331 10-190 (208)
97 3cvr_A Invasion plasmid antige 99.8 2.1E-19 7.1E-24 207.1 18.5 185 117-351 60-251 (571)
98 4gt4_A Tyrosine-protein kinase 99.8 3.8E-20 1.3E-24 197.2 11.3 122 678-799 28-163 (308)
99 4b9d_A Serine/threonine-protei 99.8 6.7E-20 2.3E-24 197.5 12.4 117 676-799 24-143 (350)
100 4ay9_X Follicle-stimulating ho 99.8 2.8E-19 9.7E-24 195.1 16.9 205 163-369 30-240 (350)
101 4fih_A Serine/threonine-protei 99.8 6.5E-20 2.2E-24 197.4 10.4 114 676-799 74-188 (346)
102 4aw0_A HPDK1, 3-phosphoinositi 99.8 6.8E-20 2.3E-24 194.3 9.3 115 676-799 32-150 (311)
103 4fie_A Serine/threonine-protei 99.8 1.7E-19 5.7E-24 199.0 11.3 115 675-799 150-265 (423)
104 3e6j_A Variable lymphocyte rec 99.8 1.4E-18 4.8E-23 177.7 16.7 149 100-252 27-176 (229)
105 3omv_A RAF proto-oncogene seri 99.8 3.5E-19 1.2E-23 189.1 11.6 115 674-799 34-150 (307)
106 3fpq_A Serine/threonine-protei 99.8 4.1E-19 1.4E-23 187.1 12.0 112 679-799 29-147 (290)
107 4b8c_D Glucose-repressible alc 99.8 2.5E-20 8.7E-25 222.2 2.9 194 33-268 126-325 (727)
108 2v70_A SLIT-2, SLIT homolog 2 99.8 1E-18 3.5E-23 177.5 14.2 155 95-252 14-170 (220)
109 2v9t_B SLIT homolog 2 protein 99.8 1.3E-18 4.4E-23 176.7 14.9 152 95-249 14-166 (220)
110 2xot_A Amphoterin-induced prot 99.8 1.5E-18 5E-23 190.3 14.1 171 95-268 21-198 (361)
111 3hyh_A Carbon catabolite-derep 99.8 8.8E-19 3E-23 183.1 11.3 114 676-799 13-130 (275)
112 4g3f_A NF-kappa-beta-inducing 99.8 5.9E-19 2E-23 189.3 9.9 110 676-799 58-168 (336)
113 2v70_A SLIT-2, SLIT homolog 2 99.8 8.8E-18 3E-22 170.6 15.9 149 119-269 14-163 (220)
114 2xot_A Amphoterin-induced prot 99.8 3.4E-18 1.2E-22 187.4 13.7 128 119-248 21-149 (361)
115 3ubd_A Ribosomal protein S6 ki 99.8 3.2E-19 1.1E-23 189.0 5.2 115 676-799 24-144 (304)
116 1h6t_A Internalin B; cell adhe 99.8 6.1E-18 2.1E-22 179.5 15.1 173 112-321 42-215 (291)
117 1h6t_A Internalin B; cell adhe 99.7 6.4E-18 2.2E-22 179.3 15.0 169 161-343 44-213 (291)
118 2v9t_B SLIT homolog 2 protein 99.7 1.4E-17 4.7E-22 169.2 16.2 149 119-269 14-162 (220)
119 1m9s_A Internalin B; cell inva 99.7 9.8E-18 3.4E-22 195.2 17.1 158 97-268 26-184 (605)
120 4ase_A Vascular endothelial gr 99.7 2.9E-18 9.8E-23 186.0 10.2 134 666-799 54-203 (353)
121 4g31_A Eukaryotic translation 99.7 3.8E-18 1.3E-22 181.2 10.7 118 676-799 5-136 (299)
122 3hmm_A TGF-beta receptor type- 99.7 4.8E-18 1.7E-22 181.1 11.5 111 677-799 4-118 (303)
123 1m9s_A Internalin B; cell inva 99.7 7.6E-18 2.6E-22 196.1 13.8 170 161-344 41-211 (605)
124 3ogk_B Coronatine-insensitive 99.7 1.8E-19 6.1E-24 210.8 -0.9 251 92-344 164-477 (592)
125 3e6j_A Variable lymphocyte rec 99.7 7.2E-17 2.5E-21 164.9 17.2 147 119-268 22-168 (229)
126 3ogk_B Coronatine-insensitive 99.7 5.5E-19 1.9E-23 206.6 0.4 273 93-368 139-454 (592)
127 4ezg_A Putative uncharacterize 99.7 4.5E-17 1.5E-21 162.3 13.4 155 160-344 41-195 (197)
128 3uto_A Twitchin; kinase, muscl 99.7 2.7E-17 9.1E-22 190.4 11.8 117 675-799 156-273 (573)
129 4b99_A Mitogen-activated prote 99.7 2.6E-17 9.1E-22 181.5 10.8 114 676-799 54-176 (398)
130 4ezg_A Putative uncharacterize 99.7 7.1E-17 2.4E-21 160.8 12.8 149 113-269 41-191 (197)
131 1dce_A Protein (RAB geranylger 99.7 1E-19 3.5E-24 210.5 -9.8 188 113-346 346-549 (567)
132 1xeu_A Internalin C; cellular 99.7 5.9E-17 2E-21 169.2 9.4 161 93-268 20-181 (263)
133 1w8a_A SLIT protein; signaling 99.7 3.5E-16 1.2E-20 155.2 13.6 133 95-252 11-143 (192)
134 1xeu_A Internalin C; cellular 99.7 1.1E-16 3.7E-21 167.2 10.4 167 141-345 21-187 (263)
135 3v5w_A G-protein coupled recep 99.7 1.5E-16 5.1E-21 183.5 11.3 115 676-799 189-310 (689)
136 1w8a_A SLIT protein; signaling 99.7 4.4E-16 1.5E-20 154.4 12.2 111 92-202 29-141 (192)
137 4f9c_A Cell division cycle 7-r 99.6 3.1E-16 1.1E-20 171.0 11.9 113 673-799 18-135 (361)
138 4b8c_D Glucose-repressible alc 99.6 3.1E-17 1.1E-21 195.6 4.2 120 133-256 217-337 (727)
139 2c30_A Serine/threonine-protei 99.6 8.2E-16 2.8E-20 165.5 13.9 128 662-799 21-159 (321)
140 2ell_A Acidic leucine-rich nuc 99.6 1.1E-15 3.8E-20 147.9 12.3 131 116-248 24-160 (168)
141 1dce_A Protein (RAB geranylger 99.6 4E-18 1.4E-22 197.2 -6.6 188 160-370 346-551 (567)
142 4aw2_A Serine/threonine-protei 99.6 2.7E-16 9.4E-21 176.1 7.9 125 667-799 65-193 (437)
143 3s95_A LIMK-1, LIM domain kina 99.6 1.3E-15 4.5E-20 162.8 12.8 116 676-799 10-126 (310)
144 3fxz_A Serine/threonine-protei 99.6 1.9E-15 6.4E-20 160.7 13.8 115 675-799 19-134 (297)
145 2qkw_B Protein kinase; three-h 99.6 4.5E-16 1.5E-20 167.4 8.9 129 666-799 29-157 (321)
146 2je0_A Acidic leucine-rich nuc 99.6 7.6E-16 2.6E-20 145.9 9.4 126 141-268 19-149 (149)
147 3uim_A Brassinosteroid insensi 99.6 8.5E-16 2.9E-20 165.5 10.3 131 664-799 18-149 (326)
148 3fe3_A MAP/microtubule affinit 99.6 1.4E-15 4.9E-20 164.0 12.0 116 675-799 14-132 (328)
149 2ell_A Acidic leucine-rich nuc 99.6 1.7E-15 5.7E-20 146.7 11.1 129 141-271 26-159 (168)
150 2je0_A Acidic leucine-rich nuc 99.6 9.3E-16 3.2E-20 145.3 7.7 126 116-243 17-148 (149)
151 2yab_A Death-associated protei 99.6 2.8E-15 9.7E-20 163.8 12.4 117 674-799 10-133 (361)
152 3zgw_A Maternal embryonic leuc 99.6 1.9E-15 6.5E-20 164.2 10.7 117 674-799 8-126 (347)
153 2nru_A Interleukin-1 receptor- 99.6 6.4E-15 2.2E-19 157.1 14.6 129 664-799 13-151 (307)
154 2wfh_A SLIT homolog 2 protein 99.6 5.7E-15 2E-19 146.5 13.1 127 96-249 14-140 (193)
155 2qol_A Ephrin receptor; recept 99.6 2E-15 7E-20 165.9 10.7 116 676-799 45-165 (373)
156 1o6l_A RAC-beta serine/threoni 99.6 2.1E-15 7.3E-20 163.3 10.5 115 676-799 5-123 (337)
157 2p1m_B Transport inhibitor res 99.6 9.3E-17 3.2E-21 187.7 -0.4 275 92-368 130-472 (594)
158 2p1m_B Transport inhibitor res 99.6 6.9E-17 2.4E-21 188.8 -1.7 274 92-369 105-448 (594)
159 2o6r_A Variable lymphocyte rec 99.6 1.2E-14 4E-19 142.0 14.5 132 95-252 10-141 (177)
160 2o6r_A Variable lymphocyte rec 99.6 8.2E-15 2.8E-19 143.1 13.2 111 91-201 27-138 (177)
161 2wfh_A SLIT homolog 2 protein 99.6 1.1E-14 3.7E-19 144.5 14.1 126 142-271 13-138 (193)
162 3v8s_A RHO-associated protein 99.6 1.2E-15 4.3E-20 169.4 8.0 122 668-799 61-186 (410)
163 3kmu_A ILK, integrin-linked ki 99.6 2.8E-15 9.7E-20 156.5 10.2 116 676-799 10-129 (271)
164 2vd5_A DMPK protein; serine/th 99.6 1.4E-15 4.9E-20 169.0 8.3 126 666-799 51-180 (412)
165 1tki_A Titin; serine kinase, m 99.6 7.8E-15 2.7E-19 157.8 13.4 116 675-799 4-120 (321)
166 2bdw_A Hypothetical protein K1 99.6 4.7E-15 1.6E-19 162.3 11.7 116 675-799 28-146 (362)
167 1fot_A TPK1 delta, CAMP-depend 99.6 4.1E-15 1.4E-19 159.7 11.1 115 676-799 6-124 (318)
168 4hcu_A Tyrosine-protein kinase 99.6 5.3E-15 1.8E-19 154.6 11.6 115 676-799 10-124 (269)
169 2y0a_A Death-associated protei 99.6 5.1E-15 1.7E-19 159.6 11.6 115 676-799 11-132 (326)
170 2ac3_A MAP kinase-interacting 99.6 9.3E-15 3.2E-19 156.5 13.5 115 676-799 12-129 (316)
171 1kob_A Twitchin; kinase, intra 99.6 5.9E-15 2E-19 162.9 12.2 117 675-799 50-167 (387)
172 3p86_A Serine/threonine-protei 99.6 3.3E-15 1.1E-19 159.8 9.9 124 669-799 30-155 (309)
173 2x4f_A Myosin light chain kina 99.6 4.2E-15 1.5E-19 163.3 10.5 112 680-799 93-205 (373)
174 3kul_A Ephrin type-A receptor 99.6 5E-15 1.7E-19 159.6 10.8 116 676-799 49-169 (325)
175 3txo_A PKC-L, NPKC-ETA, protei 99.6 4.8E-15 1.6E-19 161.5 10.7 116 675-799 22-142 (353)
176 4eqm_A Protein kinase; transfe 99.6 7.1E-15 2.4E-19 156.0 11.7 116 675-799 10-129 (294)
177 3cbl_A C-FES, proto-oncogene t 99.6 2.5E-15 8.5E-20 165.5 8.3 118 674-799 112-231 (377)
178 4fvq_A Tyrosine-protein kinase 99.6 5.4E-15 1.8E-19 156.2 10.3 116 676-799 8-131 (289)
179 3f3z_A Calcium/calmodulin-depe 99.6 5.7E-15 1.9E-19 155.0 10.4 116 675-799 8-124 (277)
180 3tki_A Serine/threonine-protei 99.6 3.8E-15 1.3E-19 160.4 9.2 116 675-799 6-123 (323)
181 3a8x_A Protein kinase C IOTA t 99.6 7.2E-15 2.5E-19 159.7 11.3 115 676-799 9-128 (345)
182 3gni_B Strad alpha; kinase fol 99.6 9.9E-15 3.4E-19 161.4 12.5 117 676-799 25-146 (389)
183 3uqc_A Probable conserved tran 99.6 1.1E-14 3.7E-19 154.0 12.0 113 676-799 31-147 (286)
184 4fr4_A YANK1, serine/threonine 99.6 5.7E-15 1.9E-19 162.6 10.1 115 676-799 15-133 (384)
185 3ugc_A Tyrosine-protein kinase 99.6 4.4E-15 1.5E-19 157.5 8.9 116 676-799 10-132 (295)
186 3a62_A Ribosomal protein S6 ki 99.6 6.1E-15 2.1E-19 159.1 10.0 115 676-799 17-139 (327)
187 1qcf_A Haematopoetic cell kina 99.6 3.1E-15 1.1E-19 169.0 8.0 121 670-799 182-302 (454)
188 3qd2_B Eukaryotic translation 99.6 1.1E-14 3.8E-19 156.7 11.9 118 676-799 6-182 (332)
189 3gen_A Tyrosine-protein kinase 99.6 9.6E-15 3.3E-19 153.8 11.1 116 675-799 23-138 (283)
190 1rdq_E PKA C-alpha, CAMP-depen 99.6 6.9E-15 2.4E-19 160.1 10.3 115 676-799 41-159 (350)
191 3c0i_A Peripheral plasma membr 99.5 6.2E-15 2.1E-19 160.7 9.9 119 676-799 24-148 (351)
192 1xjd_A Protein kinase C, theta 99.5 6.3E-15 2.2E-19 160.0 9.9 117 674-799 15-136 (345)
193 3sxs_A Cytoplasmic tyrosine-pr 99.5 8.3E-15 2.8E-19 153.0 10.3 116 675-799 7-122 (268)
194 2w4o_A Calcium/calmodulin-depe 99.5 8.1E-15 2.8E-19 159.6 10.7 115 674-799 51-166 (349)
195 3uc3_A Serine/threonine-protei 99.5 1.2E-14 4.2E-19 158.9 12.1 115 675-799 19-134 (361)
196 1opk_A P150, C-ABL, proto-onco 99.5 7.4E-15 2.5E-19 167.7 10.4 118 674-799 218-336 (495)
197 2psq_A Fibroblast growth facto 99.5 9.2E-15 3.1E-19 160.5 10.6 125 675-799 80-221 (370)
198 3vhe_A Vascular endothelial gr 99.5 4.4E-15 1.5E-19 162.1 8.0 135 665-799 11-211 (359)
199 1k9a_A Carboxyl-terminal SRC k 99.5 1.2E-14 4.2E-19 163.9 11.8 116 674-799 191-307 (450)
200 1x8b_A WEE1HU, WEE1-like prote 99.5 1.5E-14 5.1E-19 152.3 11.5 120 675-799 10-133 (289)
201 1luf_A Muscle-specific tyrosin 99.5 9.2E-15 3.1E-19 158.4 10.2 127 673-799 44-192 (343)
202 3niz_A Rhodanese family protei 99.5 1.2E-14 4.2E-19 155.5 10.8 117 674-799 19-137 (311)
203 4dc2_A Protein kinase C IOTA t 99.5 7.8E-15 2.7E-19 162.1 9.4 116 675-799 51-171 (396)
204 4euu_A Serine/threonine-protei 99.5 1.5E-14 5E-19 155.4 11.3 118 676-799 9-130 (319)
205 3soa_A Calcium/calmodulin-depe 99.5 9.2E-15 3.2E-19 164.2 10.1 116 675-799 10-128 (444)
206 2clq_A Mitogen-activated prote 99.5 3E-14 1E-18 150.8 13.4 117 677-799 23-140 (295)
207 2jam_A Calcium/calmodulin-depe 99.5 1.2E-14 4.2E-19 154.7 10.5 116 675-799 8-124 (304)
208 3kk8_A Calcium/calmodulin depe 99.5 2.1E-14 7.3E-19 151.1 11.7 116 675-799 5-123 (284)
209 3t9t_A Tyrosine-protein kinase 99.5 1.7E-14 5.8E-19 150.3 10.6 115 676-799 8-122 (267)
210 2acx_A G protein-coupled recep 99.5 1.6E-14 5.3E-19 166.1 11.2 118 675-799 183-304 (576)
211 2y94_A 5'-AMP-activated protei 99.5 1.6E-14 5.3E-19 163.5 11.0 115 676-799 16-134 (476)
212 1fmk_A C-SRC, P60-SRC, tyrosin 99.5 1.1E-14 3.9E-19 164.2 9.8 119 672-799 180-298 (452)
213 3kn6_A Ribosomal protein S6 ki 99.5 3.5E-14 1.2E-18 153.0 13.2 107 681-799 16-124 (325)
214 3soc_A Activin receptor type-2 99.5 2E-14 6.9E-19 154.6 11.3 113 675-799 23-139 (322)
215 3bhy_A Death-associated protei 99.5 2E-14 6.9E-19 151.2 11.0 115 676-799 5-126 (283)
216 2a2a_A Death-associated protei 99.5 1.7E-14 5.8E-19 155.0 10.5 115 676-799 12-133 (321)
217 4agu_A Cyclin-dependent kinase 99.5 2.8E-14 9.5E-19 152.4 12.1 115 676-799 3-120 (311)
218 3is5_A Calcium-dependent prote 99.5 2E-14 6.8E-19 151.7 10.6 119 676-799 22-142 (285)
219 3l9p_A Anaplastic lymphoma kin 99.5 1.5E-14 5.2E-19 158.6 10.0 122 676-799 71-199 (367)
220 3o0g_A Cell division protein k 99.5 2.8E-14 9.5E-19 151.1 11.7 115 676-799 2-119 (292)
221 3dtc_A Mitogen-activated prote 99.5 2.1E-14 7.2E-19 150.0 10.6 113 676-799 7-123 (271)
222 2i0e_A Protein kinase C-beta I 99.5 1.3E-14 4.5E-19 158.1 9.2 116 675-799 19-139 (353)
223 3cok_A Serine/threonine-protei 99.5 2.1E-14 7.2E-19 150.7 10.4 116 676-799 11-130 (278)
224 3kfa_A Tyrosine-protein kinase 99.5 9.1E-15 3.1E-19 154.3 7.7 119 673-799 10-129 (288)
225 3fdn_A Serine/threonine-protei 99.5 1.9E-14 6.6E-19 151.2 10.1 117 674-799 7-127 (279)
226 2j7t_A Serine/threonine-protei 99.5 2.7E-14 9.2E-19 151.8 11.3 118 674-799 17-135 (302)
227 3ork_A Serine/threonine protei 99.5 7.4E-15 2.5E-19 157.1 6.8 116 675-799 11-134 (311)
228 3q5i_A Protein kinase; CDPK, m 99.5 1.9E-14 6.6E-19 164.7 10.7 117 674-799 34-164 (504)
229 1ob3_A PFPK5, cell division co 99.5 2.5E-14 8.4E-19 151.2 10.7 115 676-799 2-118 (288)
230 3lxl_A Tyrosine-protein kinase 99.5 3E-14 1E-18 153.5 11.4 116 676-799 23-145 (327)
231 3h4j_B AMPK kdaid, SNF1-like p 99.5 1.5E-14 5.1E-19 156.5 9.1 114 676-799 9-126 (336)
232 2ivs_A Proto-oncogene tyrosine 99.5 2.1E-14 7.2E-19 153.5 9.9 125 675-799 22-168 (314)
233 2h8h_A Proto-oncogene tyrosine 99.5 1.5E-14 5E-19 166.8 9.3 119 672-799 263-381 (535)
234 2rku_A Serine/threonine-protei 99.5 3.2E-14 1.1E-18 150.7 11.2 115 676-799 15-133 (294)
235 2zv2_A Calcium/calmodulin-depe 99.5 1.5E-14 5.1E-19 153.6 8.6 115 675-799 12-155 (298)
236 3eqc_A Dual specificity mitoge 99.5 3.2E-14 1.1E-18 155.4 11.3 115 676-799 33-149 (360)
237 2h6d_A 5'-AMP-activated protei 99.5 3.9E-14 1.3E-18 148.4 11.5 116 675-799 10-129 (276)
238 1a9n_A U2A', U2A'; complex (nu 99.5 2.1E-14 7.1E-19 140.2 8.6 133 111-248 14-153 (176)
239 1phk_A Phosphorylase kinase; g 99.5 3.8E-14 1.3E-18 150.3 11.4 117 674-799 15-142 (298)
240 4ejn_A RAC-alpha serine/threon 99.5 1.2E-14 4E-19 163.9 7.8 116 675-799 147-266 (446)
241 3hko_A Calcium/calmodulin-depe 99.5 1.4E-14 4.7E-19 157.3 8.0 128 672-799 22-186 (345)
242 3i6u_A CDS1, serine/threonine- 99.5 2.1E-14 7E-19 160.5 9.6 116 674-799 133-257 (419)
243 2buj_A Serine/threonine-protei 99.5 2.5E-14 8.5E-19 153.3 9.8 120 675-799 28-152 (317)
244 1qpc_A LCK kinase; alpha beta 99.5 1.6E-14 5.6E-19 151.7 8.2 117 674-799 11-127 (279)
245 2r5t_A Serine/threonine-protei 99.5 1.3E-14 4.5E-19 159.3 7.8 115 676-799 38-157 (373)
246 2pmi_A Negative RE, cyclin-dep 99.5 3.5E-14 1.2E-18 152.3 11.0 121 675-799 4-126 (317)
247 2yex_A Serine/threonine-protei 99.5 2.7E-14 9.3E-19 149.6 9.9 115 676-799 7-123 (276)
248 4e5w_A Tyrosine-protein kinase 99.5 3.9E-14 1.3E-18 150.5 11.2 115 677-799 22-144 (302)
249 2owb_A Serine/threonine-protei 99.5 3.6E-14 1.2E-18 153.5 11.1 115 676-799 41-159 (335)
250 2eue_A Carbon catabolite derep 99.5 6.2E-14 2.1E-18 147.0 12.5 114 676-799 13-130 (275)
251 3gbz_A Kinase, CMGC CDK; ssgci 99.5 2.6E-14 8.8E-19 154.3 9.8 116 674-799 32-150 (329)
252 2qr7_A Ribosomal protein S6 ki 99.5 2.3E-14 8E-19 155.5 9.3 112 675-799 21-134 (342)
253 2h34_A Serine/threonine-protei 99.5 4.6E-14 1.6E-18 150.8 11.5 116 675-799 33-152 (309)
254 2vgo_A Serine/threonine-protei 99.5 3.4E-14 1.2E-18 149.7 10.2 115 676-799 14-132 (284)
255 1t4h_A Serine/threonine-protei 99.5 6.3E-14 2.2E-18 148.1 12.3 113 678-799 28-147 (290)
256 3mwu_A Calmodulin-domain prote 99.5 2.7E-14 9.2E-19 162.8 10.1 115 676-799 22-139 (486)
257 3lij_A Calcium/calmodulin depe 99.5 2.6E-14 8.8E-19 163.3 10.0 115 676-799 37-154 (494)
258 3p1a_A MYT1 kinase, membrane-a 99.5 2.5E-14 8.7E-19 153.0 9.3 115 676-799 57-175 (311)
259 4eut_A Serine/threonine-protei 99.5 3.1E-14 1.1E-18 157.8 10.3 118 676-799 9-130 (396)
260 3nyv_A Calmodulin-domain prote 99.5 3.7E-14 1.3E-18 161.5 10.9 115 676-799 26-144 (484)
261 1t46_A HOMO sapiens V-KIT hard 99.5 2.2E-14 7.5E-19 153.2 8.3 126 674-799 21-163 (313)
262 3tt0_A Basic fibroblast growth 99.5 3.7E-14 1.3E-18 156.4 10.3 125 675-799 68-209 (382)
263 2pvf_A Fibroblast growth facto 99.5 4.5E-14 1.5E-18 152.6 10.7 125 675-799 34-175 (334)
264 1u5q_A Serine/threonine protei 99.5 3.8E-14 1.3E-18 154.2 10.2 115 676-799 54-172 (348)
265 3a7i_A MST3 kinase, serine/thr 99.5 8.4E-14 2.9E-18 148.1 12.6 114 676-799 22-137 (303)
266 4f0f_A Serine/threonine-protei 99.5 5.8E-14 2E-18 148.1 11.1 115 675-799 18-140 (287)
267 3lxp_A Non-receptor tyrosine-p 99.5 1.1E-13 3.8E-18 148.5 13.5 112 678-799 33-152 (318)
268 3e7e_A HBUB1, BUB1A, mitotic c 99.5 3.1E-14 1.1E-18 155.9 9.3 119 674-799 63-190 (365)
269 3sb4_A Hypothetical leucine ri 99.5 3.3E-14 1.1E-18 153.4 9.4 236 92-336 25-327 (329)
270 3c4z_A Rhodopsin kinase; Ser/T 99.5 4.8E-14 1.6E-18 161.6 11.0 119 676-799 185-307 (543)
271 2wqm_A Serine/threonine-protei 99.5 9.4E-14 3.2E-18 148.3 12.6 119 676-799 32-154 (310)
272 3llt_A Serine/threonine kinase 99.5 4.8E-14 1.6E-18 154.0 10.5 127 664-799 23-155 (360)
273 1u59_A Tyrosine-protein kinase 99.5 9.4E-14 3.2E-18 146.6 12.2 114 677-799 10-128 (287)
274 1rjb_A FL cytokine receptor; k 99.5 2.9E-14 1E-18 154.6 8.5 127 673-799 42-190 (344)
275 3qup_A Tyrosine-protein kinase 99.5 3.1E-14 1.1E-18 153.0 8.4 124 673-799 20-155 (323)
276 2w1i_A JAK2; chromosomal rearr 99.5 7.7E-14 2.6E-18 150.2 11.4 116 676-799 41-163 (326)
277 2y7j_A Phosphorylase B kinase 99.5 8.8E-14 3E-18 152.4 12.1 120 671-799 89-218 (365)
278 1mp8_A Focal adhesion kinase 1 99.5 7.2E-14 2.4E-18 147.0 10.9 116 675-799 14-134 (281)
279 2ozo_A Tyrosine-protein kinase 99.5 6.8E-14 2.3E-18 163.7 11.7 108 683-799 343-454 (613)
280 3pg1_A Mitogen-activated prote 99.5 6.6E-14 2.3E-18 153.0 10.9 124 667-799 13-152 (362)
281 2wei_A Calmodulin-domain prote 99.5 6.5E-14 2.2E-18 147.8 10.5 117 674-799 20-139 (287)
282 1p4o_A Insulin-like growth fac 99.5 2.1E-14 7.3E-19 154.1 6.8 133 667-799 16-156 (322)
283 1zy4_A Serine/threonine-protei 99.5 5.4E-14 1.9E-18 149.1 9.9 116 675-799 5-134 (303)
284 2w5a_A Serine/threonine-protei 99.5 7.1E-14 2.4E-18 146.7 10.6 120 675-799 5-129 (279)
285 2ycf_A Serine/threonine-protei 99.5 4.8E-14 1.6E-18 151.5 9.5 115 675-799 9-132 (322)
286 1mqb_A Ephrin type-A receptor 99.5 6.8E-14 2.3E-18 151.2 10.7 116 676-799 44-165 (333)
287 1vzo_A Ribosomal protein S6 ki 99.5 3.1E-14 1.1E-18 155.4 7.9 115 676-799 54-177 (355)
288 4aaa_A Cyclin-dependent kinase 99.5 8.3E-14 2.8E-18 150.3 11.1 115 676-799 25-142 (331)
289 2yfx_A Tyrosine-protein kinase 99.5 7.9E-14 2.7E-18 150.2 10.6 123 675-799 29-158 (327)
290 3poz_A Epidermal growth factor 99.5 7.1E-14 2.4E-18 150.6 10.3 115 676-799 15-135 (327)
291 2eva_A TAK1 kinase - TAB1 chim 99.5 7.2E-14 2.5E-18 149.2 10.1 113 676-799 8-120 (307)
292 2pml_X PFPK7, Ser/Thr protein 99.5 3.6E-14 1.2E-18 154.1 7.8 117 675-799 30-169 (348)
293 3lm5_A Serine/threonine-protei 99.5 6.1E-14 2.1E-18 151.1 9.4 127 666-799 18-149 (327)
294 2xir_A Vascular endothelial gr 99.5 5.1E-14 1.8E-18 150.5 8.8 134 666-799 17-166 (316)
295 2a19_B Interferon-induced, dou 99.5 7.5E-14 2.6E-18 146.7 9.7 113 676-799 11-140 (284)
296 1ds9_A Outer arm dynein; leuci 99.5 2.7E-16 9.2E-21 156.8 -8.8 146 115-265 17-180 (198)
297 3rp9_A Mitogen-activated prote 99.5 6.7E-14 2.3E-18 158.2 9.9 115 675-799 52-174 (458)
298 2x7f_A TRAF2 and NCK-interacti 99.5 7.4E-14 2.5E-18 150.2 9.5 124 668-799 16-147 (326)
299 3dbq_A Dual specificity protei 99.5 1.1E-13 3.8E-18 150.1 11.0 114 676-799 9-126 (343)
300 3q4u_A Activin receptor type-1 99.5 2.2E-13 7.4E-18 144.6 13.0 110 675-798 7-122 (301)
301 3n9x_A Phosphotransferase; mal 99.5 8.9E-14 3E-18 156.0 10.4 115 675-799 25-147 (432)
302 2r3i_A Cell division protein k 99.5 1.3E-13 4.5E-18 146.2 11.2 116 676-799 3-121 (299)
303 4fl3_A Tyrosine-protein kinase 99.5 1.5E-13 5E-18 161.3 12.6 108 682-799 375-487 (635)
304 2i6l_A Mitogen-activated prote 99.5 1.3E-13 4.3E-18 147.6 11.0 114 675-799 10-138 (320)
305 3com_A Serine/threonine-protei 99.5 1.2E-13 4.1E-18 147.7 10.8 116 674-799 27-143 (314)
306 3dls_A PAS domain-containing s 99.5 3.6E-14 1.2E-18 153.5 6.8 116 675-799 23-148 (335)
307 2izr_A Casein kinase I isoform 99.5 9.8E-14 3.4E-18 149.7 10.1 114 675-799 8-123 (330)
308 1xbb_A Tyrosine-protein kinase 99.5 1.2E-13 4.2E-18 146.0 10.7 114 676-799 16-135 (291)
309 1a9n_A U2A', U2A'; complex (nu 99.5 1.1E-13 3.6E-18 135.1 9.3 126 140-270 20-151 (176)
310 2vwi_A Serine/threonine-protei 99.5 6.8E-14 2.3E-18 148.6 8.1 125 674-799 13-139 (303)
311 1fvr_A Tyrosine-protein kinase 99.4 2.2E-13 7.4E-18 146.7 12.0 124 676-799 25-160 (327)
312 3pls_A Macrophage-stimulating 99.4 1.6E-13 5.5E-18 145.4 10.8 114 678-799 23-142 (298)
313 3brb_A Proto-oncogene tyrosine 99.4 1.1E-13 3.8E-18 147.9 9.5 124 673-799 31-165 (313)
314 3c1x_A Hepatocyte growth facto 99.4 8.1E-14 2.8E-18 153.1 8.5 114 678-799 91-210 (373)
315 2i1m_A Macrophage colony-stimu 99.4 7.6E-14 2.6E-18 150.6 8.0 129 671-799 41-182 (333)
316 3f66_A Hepatocyte growth facto 99.4 1.6E-13 5.5E-18 145.5 10.3 115 677-799 26-146 (298)
317 2zmd_A Dual specificity protei 99.4 2.1E-13 7.2E-18 150.7 11.6 114 676-799 56-173 (390)
318 3gxj_A TGF-beta receptor type- 99.4 1.2E-13 4.1E-18 146.7 9.2 109 676-798 3-117 (303)
319 2wtk_C Serine/threonine-protei 99.4 2.1E-13 7.2E-18 145.0 11.0 117 675-799 4-127 (305)
320 2vuw_A Serine/threonine-protei 99.4 1.5E-14 5.2E-19 156.5 1.9 112 676-798 20-178 (336)
321 3mtl_A Cell division protein k 99.4 5E-14 1.7E-18 151.6 5.9 115 676-799 2-118 (324)
322 1nxk_A MAP kinase-activated pr 99.4 1.6E-13 5.4E-18 152.2 10.1 112 676-799 61-179 (400)
323 1ua2_A CAK, cell division prot 99.4 1.4E-13 4.7E-18 149.6 9.2 117 674-799 8-130 (346)
324 1byg_A CSK, protein (C-termina 99.4 9.1E-14 3.1E-18 145.9 7.5 115 675-799 20-135 (278)
325 3cc6_A Protein tyrosine kinase 99.4 2.2E-13 7.7E-18 143.1 10.4 117 674-799 10-131 (281)
326 3mdy_A Bone morphogenetic prot 99.4 4.4E-13 1.5E-17 144.6 13.0 114 672-799 33-152 (337)
327 3g39_A Variable lymphocyte rec 99.4 6.5E-13 2.2E-17 128.7 12.6 88 163-250 30-117 (170)
328 1cm8_A Phosphorylated MAP kina 99.4 1.3E-13 4.4E-18 151.2 8.4 114 675-799 24-146 (367)
329 3g33_A Cell division protein k 99.4 3.2E-13 1.1E-17 144.1 11.2 118 674-799 7-138 (308)
330 3oz6_A Mitogen-activated prote 99.4 2.9E-13 9.8E-18 149.5 11.0 115 674-799 7-127 (388)
331 3og7_A AKAP9-BRAF fusion prote 99.4 2.5E-13 8.6E-18 143.5 10.1 115 674-799 22-138 (289)
332 3m2w_A MAP kinase-activated pr 99.4 3.1E-13 1.1E-17 143.5 10.7 112 676-799 17-135 (299)
333 3pfq_A PKC-B, PKC-beta, protei 99.4 1.7E-13 5.7E-18 162.0 9.1 117 674-799 339-460 (674)
334 1ds9_A Outer arm dynein; leuci 99.4 1.6E-15 5.3E-20 151.2 -7.1 155 159-343 14-185 (198)
335 3kex_A Receptor tyrosine-prote 99.4 9.8E-14 3.4E-18 149.4 6.5 115 676-799 13-133 (325)
336 1b6c_B TGF-B superfamily recep 99.4 8.1E-13 2.8E-17 142.9 13.6 113 672-798 38-156 (342)
337 3sb4_A Hypothetical leucine ri 99.4 6.2E-14 2.1E-18 151.3 4.7 259 106-376 13-322 (329)
338 4fdw_A Leucine rich hypothetic 99.4 4.2E-12 1.4E-16 140.4 19.4 238 116-365 113-358 (401)
339 3nsz_A CK II alpha, casein kin 99.4 4E-13 1.4E-17 144.7 10.8 109 676-799 36-148 (330)
340 3eb0_A Putative uncharacterize 99.4 3.4E-13 1.2E-17 148.6 10.5 118 672-799 3-159 (383)
341 3lb7_A RAF proto-oncogene seri 99.4 3.9E-13 1.3E-17 143.5 10.5 114 675-799 35-150 (307)
342 3lzb_A Epidermal growth factor 99.4 3.4E-13 1.2E-17 145.3 10.0 115 676-799 15-135 (327)
343 3an0_A Dual specificity mitoge 99.4 6E-13 2E-17 144.1 11.9 120 674-799 49-171 (340)
344 3mi9_A Cell division protein k 99.4 4.6E-13 1.6E-17 145.7 11.0 115 676-799 17-142 (351)
345 1csn_A Casein kinase-1; phosph 99.4 5.4E-13 1.9E-17 141.3 11.3 114 675-799 9-124 (298)
346 3g39_A Variable lymphocyte rec 99.4 6.8E-13 2.3E-17 128.6 10.9 105 95-225 12-116 (170)
347 2iwi_A Serine/threonine-protei 99.4 1.2E-13 4.2E-18 147.5 5.7 119 672-799 27-157 (312)
348 2r9u_A Variable lymphocyte rec 99.4 1.4E-12 4.8E-17 126.8 12.7 86 163-248 33-118 (174)
349 2b9h_A MAP kinase FUS3, mitoge 99.4 4.4E-13 1.5E-17 145.8 10.1 115 674-799 9-130 (353)
350 3cek_A Dual specificity protei 99.4 2E-13 6.8E-18 146.0 7.2 122 668-799 20-145 (313)
351 3ll6_A Cyclin G-associated kin 99.4 3.9E-13 1.3E-17 144.9 9.5 117 676-799 28-154 (337)
352 3fme_A Dual specificity mitoge 99.4 5.3E-13 1.8E-17 140.7 10.2 119 675-799 6-127 (290)
353 3byv_A Rhoptry kinase; malaria 99.4 9.2E-14 3.1E-18 152.9 4.3 122 675-799 72-224 (377)
354 3ttj_A Mitogen-activated prote 99.4 3.5E-13 1.2E-17 152.3 8.8 113 675-799 61-182 (464)
355 1u46_A ACK-1, activated CDC42 99.4 3.5E-13 1.2E-17 142.2 8.2 115 676-799 18-139 (291)
356 3qyz_A Mitogen-activated prote 99.4 6.6E-13 2.3E-17 145.3 10.3 114 675-799 26-146 (364)
357 4fdw_A Leucine rich hypothetic 99.4 6.3E-12 2.2E-16 139.0 18.1 251 103-365 123-383 (401)
358 2j0j_A Focal adhesion kinase 1 99.4 5.9E-13 2E-17 156.8 10.3 118 673-799 387-509 (656)
359 2xrw_A Mitogen-activated prote 99.4 8.9E-13 3.1E-17 144.7 11.1 113 675-799 24-145 (371)
360 2v62_A Serine/threonine-protei 99.4 3.6E-13 1.2E-17 146.3 7.7 114 676-799 37-169 (345)
361 2y4i_B KSR2, HKSR2, kinase sup 99.4 1.1E-13 3.9E-18 148.1 3.6 120 670-799 27-148 (319)
362 3rgf_A Cyclin-dependent kinase 99.4 8.9E-13 3.1E-17 146.5 10.9 119 678-799 22-146 (405)
363 2pzi_A Probable serine/threoni 99.4 4.4E-13 1.5E-17 159.2 8.8 114 675-799 79-200 (681)
364 2fst_X Mitogen-activated prote 99.4 3.7E-13 1.3E-17 147.4 7.6 114 675-799 28-150 (367)
365 2jii_A Serine/threonine-protei 99.4 3.3E-13 1.1E-17 146.9 7.1 111 676-799 42-177 (352)
366 1blx_A Cyclin-dependent kinase 99.4 5.9E-13 2E-17 143.0 9.0 118 674-799 9-138 (326)
367 3op5_A Serine/threonine-protei 99.4 5.4E-13 1.9E-17 146.0 8.6 117 674-799 33-170 (364)
368 2r9u_A Variable lymphocyte rec 99.4 1.9E-12 6.5E-17 125.9 11.2 104 95-224 15-118 (174)
369 3kvw_A DYRK2, dual specificity 99.4 1.2E-12 4E-17 146.6 10.6 117 674-799 95-218 (429)
370 3aln_A Dual specificity mitoge 99.4 1.8E-12 6.2E-17 139.4 11.3 120 675-799 21-143 (327)
371 4exu_A Mitogen-activated prote 99.4 1E-12 3.6E-17 144.2 9.4 113 675-799 41-162 (371)
372 3fhr_A MAP kinase-activated pr 99.4 1.8E-12 6.1E-17 140.2 11.1 114 674-799 26-146 (336)
373 3g2f_A Bone morphogenetic prot 99.4 1.9E-12 6.4E-17 139.8 11.2 111 675-799 12-129 (336)
374 1wak_A Serine/threonine-protei 99.3 1.1E-12 3.9E-17 144.7 9.2 116 675-799 36-164 (397)
375 1z57_A Dual specificity protei 99.3 1.9E-12 6.5E-17 139.5 10.6 116 675-799 13-136 (339)
376 3coi_A Mitogen-activated prote 99.3 9.9E-13 3.4E-17 143.2 8.2 113 675-799 23-144 (353)
377 3qa8_A MGC80376 protein; kinas 99.3 3.5E-13 1.2E-17 156.7 4.4 118 676-799 14-139 (676)
378 3uzp_A CKI-delta, CKID, casein 99.3 3.9E-12 1.3E-16 134.5 11.1 115 674-799 7-123 (296)
379 3a99_A Proto-oncogene serine/t 99.3 8.5E-13 2.9E-17 141.7 5.5 119 672-799 39-167 (320)
380 3e3p_A Protein kinase, putativ 99.3 4E-12 1.4E-16 138.6 10.9 123 669-798 16-146 (360)
381 3p23_A Serine/threonine-protei 99.3 2.3E-12 7.9E-17 144.2 9.0 112 676-799 24-136 (432)
382 4hgt_A Casein kinase I isoform 99.3 4.7E-12 1.6E-16 133.8 10.5 115 674-799 7-123 (296)
383 1j1b_A Glycogen synthase kinas 99.3 3.2E-12 1.1E-16 142.6 9.6 113 677-799 55-174 (420)
384 2dyl_A Dual specificity mitoge 99.3 5.9E-12 2E-16 134.6 10.1 116 675-799 24-142 (318)
385 1q8y_A SR protein kinase; tran 99.3 3.7E-12 1.3E-16 139.5 8.6 115 676-799 19-149 (373)
386 4e7w_A Glycogen synthase kinas 99.3 3.5E-12 1.2E-16 141.1 8.3 114 676-799 40-159 (394)
387 2rio_A Serine/threonine-protei 99.3 5.9E-12 2E-16 141.2 10.2 116 678-799 17-133 (434)
388 3sv0_A Casein kinase I-like; t 99.3 1.2E-11 4.2E-16 140.0 12.6 114 675-799 6-121 (483)
389 2eu9_A Dual specificity protei 99.3 9.6E-12 3.3E-16 135.0 10.7 116 675-799 18-141 (355)
390 2vx3_A Dual specificity tyrosi 99.3 9E-12 3.1E-16 137.2 10.4 119 671-798 49-174 (382)
391 3q60_A ROP5B; pseudokinase, tr 99.2 8.1E-12 2.8E-16 137.0 8.2 114 676-799 62-212 (371)
392 2ifg_A High affinity nerve gro 99.2 3E-11 1E-15 131.1 10.5 103 144-249 13-117 (347)
393 3en9_A Glycoprotease, O-sialog 99.2 3.4E-11 1.2E-15 138.4 10.3 103 679-799 339-449 (540)
394 2ifg_A High affinity nerve gro 99.1 6.5E-11 2.2E-15 128.4 9.8 101 97-200 13-116 (347)
395 3un9_A NLR family member X1; l 99.1 3.5E-12 1.2E-16 139.6 -1.7 134 116-249 72-225 (372)
396 3un9_A NLR family member X1; l 99.1 2E-12 6.7E-17 141.7 -4.2 167 92-258 72-262 (372)
397 4azs_A Methyltransferase WBDD; 99.1 8.8E-11 3E-15 135.8 8.4 104 684-799 242-357 (569)
398 1zar_A RIO2 kinase; serine kin 99.1 1.5E-10 5.3E-15 121.6 9.4 108 672-799 86-211 (282)
399 2ra8_A Uncharacterized protein 98.9 1.8E-09 6.1E-14 117.2 6.5 155 206-363 167-341 (362)
400 4fs7_A Uncharacterized protein 98.8 1.2E-07 4.2E-12 104.4 18.0 169 93-268 72-262 (394)
401 1zth_A RIO1 serine protein kin 98.8 4.9E-09 1.7E-13 108.6 6.2 105 678-798 49-187 (258)
402 3dzo_A Rhoptry kinase domain; 98.7 5.9E-09 2E-13 115.8 5.3 122 675-799 77-229 (413)
403 2ra8_A Uncharacterized protein 98.7 2.8E-09 9.7E-14 115.7 1.4 208 91-317 106-341 (362)
404 4gt6_A Cell surface protein; l 98.5 9.4E-07 3.2E-11 97.3 16.5 261 94-365 66-370 (394)
405 4fs7_A Uncharacterized protein 98.5 1.7E-06 5.9E-11 95.2 15.5 217 133-362 155-376 (394)
406 4gyi_A RIO2 kinase; protein ki 98.4 4.1E-08 1.4E-12 106.4 1.9 105 678-799 97-223 (397)
407 4gt6_A Cell surface protein; l 98.4 8.8E-06 3E-10 89.5 18.5 257 109-377 56-359 (394)
408 3rw6_A Nuclear RNA export fact 98.3 8.4E-08 2.9E-12 98.9 0.3 78 187-266 170-258 (267)
409 4h09_A Hypothetical leucine ri 98.3 1.9E-05 6.4E-10 86.2 18.5 257 93-361 47-342 (379)
410 1io0_A Tropomodulin; LRR prote 98.2 3.6E-07 1.2E-11 89.3 1.9 64 185-248 63-136 (185)
411 1io0_A Tropomodulin; LRR prote 98.2 2.2E-07 7.6E-12 90.8 0.2 24 107-130 27-51 (185)
412 3rw6_A Nuclear RNA export fact 98.2 1.5E-06 5.1E-11 89.5 5.9 96 144-241 148-257 (267)
413 3tm0_A Aminoglycoside 3'-phosp 98.0 2.2E-05 7.7E-10 80.8 10.2 112 673-799 11-123 (263)
414 4h09_A Hypothetical leucine ri 97.8 0.00056 1.9E-08 74.4 19.3 240 93-343 70-345 (379)
415 3e4g_A ATP synthase subunit S, 97.5 6.8E-05 2.3E-09 71.7 4.2 84 163-246 61-150 (176)
416 1nd4_A Aminoglycoside 3'-phosp 97.5 0.00013 4.5E-09 74.5 6.6 103 677-799 21-125 (264)
417 3e4g_A ATP synthase subunit S, 97.4 4.9E-05 1.7E-09 72.7 2.7 87 136-222 58-150 (176)
418 3d1u_A Putative fructosamine-3 97.3 0.0004 1.4E-08 72.6 8.4 76 680-759 19-97 (288)
419 3dxp_A Putative acyl-COA dehyd 96.8 0.0011 3.8E-08 71.5 6.1 107 681-799 43-157 (359)
420 1pgv_A TMD-1, tropomodulin TMD 96.4 0.0014 4.6E-08 63.9 2.7 15 210-224 97-111 (197)
421 1pgv_A TMD-1, tropomodulin TMD 96.2 0.0011 3.9E-08 64.4 1.1 20 110-129 35-55 (197)
422 3rfe_A Platelet glycoprotein I 96.2 0.0071 2.4E-07 54.8 6.4 56 286-343 12-68 (130)
423 3rfe_A Platelet glycoprotein I 96.0 0.0097 3.3E-07 53.9 6.2 36 164-199 32-67 (130)
424 3r70_A Aminoglycoside phosphot 95.9 0.024 8.3E-07 59.8 9.7 102 677-799 38-143 (320)
425 4gkh_A Aminoglycoside 3'-phosp 95.5 0.068 2.3E-06 54.5 11.4 101 683-799 31-134 (272)
426 3tdw_A Gentamicin resistance p 95.5 0.047 1.6E-06 57.2 10.2 102 681-799 24-129 (306)
427 2jwp_A Malectin, MGC80075; sug 95.1 0.023 8E-07 54.2 5.5 86 484-576 53-138 (174)
428 3sg8_A APH(2'')-ID; antibiotic 94.5 0.046 1.6E-06 57.1 6.5 102 681-799 25-132 (304)
429 3f7w_A Putative fructosamine-3 94.3 0.11 3.6E-06 53.8 8.7 77 678-758 17-96 (288)
430 2olc_A MTR kinase, methylthior 94.3 0.09 3.1E-06 57.1 8.5 76 681-758 35-121 (397)
431 3ovc_A Hygromycin-B 4-O-kinase 93.7 0.14 4.7E-06 55.0 8.5 97 680-798 45-144 (362)
432 3jr1_A Putative fructosamine-3 93.4 0.14 4.8E-06 53.7 7.7 74 681-758 41-117 (312)
433 3ats_A Putative uncharacterize 92.4 0.075 2.6E-06 56.7 4.0 115 682-799 26-157 (357)
434 3cxl_A N-chimerin; SH2, RHO-GA 80.1 0.27 9.2E-06 54.6 -0.9 60 681-743 147-215 (463)
435 2q83_A YTAA protein; 2635576, 78.2 6.2 0.00021 40.9 9.2 73 682-759 38-118 (346)
436 2pyw_A Uncharacterized protein 77.9 4.3 0.00015 44.0 8.0 80 681-763 39-130 (420)
437 1nw1_A Choline kinase (49.2 KD 73.8 4 0.00014 44.5 6.3 95 682-799 79-182 (429)
438 2ks1_B Epidermal growth factor 73.7 2.5 8.5E-05 29.8 2.9 27 620-646 12-39 (44)
439 1zyl_A Hypothetical protein YI 68.7 12 0.00041 38.6 8.5 76 682-759 32-114 (328)
440 3csv_A Aminoglycoside phosphot 68.5 19 0.00066 37.2 10.0 100 682-799 24-126 (333)
441 2l2t_A Receptor tyrosine-prote 68.2 3.8 0.00013 28.8 2.8 26 621-646 12-38 (44)
442 3feg_A Choline/ethanolamine ki 68.0 5.3 0.00018 42.7 5.5 73 682-759 56-137 (379)
443 2ppq_A HSK, HK, homoserine kin 67.2 9.4 0.00032 39.3 7.2 90 667-759 8-110 (322)
444 2qg7_A Ethanolamine kinase PV0 64.2 14 0.00049 40.5 8.2 97 681-799 113-211 (458)
445 3dxq_A Choline/ethanolamine ki 63.5 7.7 0.00026 39.7 5.6 71 681-759 23-95 (301)
446 2jwa_A Receptor tyrosine-prote 61.6 5.3 0.00018 28.0 2.5 7 639-645 32-38 (44)
447 2k9y_A Ephrin type-A receptor 57.3 5.1 0.00017 27.6 1.9 24 621-644 15-39 (41)
448 3c5i_A Choline kinase; choline 50.8 11 0.00037 39.9 4.2 73 682-759 39-121 (369)
449 3i1a_A Spectinomycin phosphotr 46.4 44 0.0015 34.7 8.1 67 686-759 33-108 (339)
450 3f2s_A CK, chetk-alpha, cholin 41.2 39 0.0013 36.3 6.6 74 682-759 58-158 (401)
451 1iij_A ERBB-2 receptor protein 37.2 11 0.00038 24.9 0.9 6 640-645 29-34 (35)
452 3mes_A Choline kinase; malaria 36.2 52 0.0018 35.5 6.7 96 682-799 76-180 (424)
453 2l2t_A Receptor tyrosine-prote 33.8 38 0.0013 23.7 3.2 26 621-646 16-41 (44)
454 2ks1_B Epidermal growth factor 32.8 38 0.0013 23.7 3.1 28 619-646 15-42 (44)
455 2k1k_A Ephrin type-A receptor 30.1 32 0.0011 23.3 2.3 9 622-630 13-21 (38)
456 2lz0_A Uncharacterized protein 24.6 1.9E+02 0.0064 23.9 6.8 45 151-196 8-52 (100)
No 1
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=4.9e-41 Score=362.00 Aligned_cols=294 Identities=25% Similarity=0.431 Sum_probs=238.9
Q ss_pred CCCHHHHHHHHHHHHhcCC----CCCCCCCCCCCCCCCCcccCCCCCCCCCCeEecCCCCcccEEEEEeCCCCCcc--cC
Q 003737 35 KLHAEEVKALKQIGRKLGK----KDWNFGVDPCSQKGNWELSSDDKKGFESNVTCDCSSATCHVVTIALKAQNLTG--TL 108 (799)
Q Consensus 35 ~~~~~~~~aL~~~~~~~~~----~~W~~~~d~C~~~~~W~~~~~~~~~~~~gv~c~~~~~~~~v~~L~L~~~~l~g--~~ 108 (799)
.|.++|++||++||+++.+ ++|..+.|||. +.| .||+|+.....++|+.|+|++++++| .+
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~~l~~W~~~~~~C~--~~w-----------~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~ 68 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPTTLSSWLPTTDCCN--RTW-----------LGVLCDTDTQTYRVNNLDLSGLNLPKPYPI 68 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCGGGTTCCTTSCTTT--TCS-----------TTEEECCSSSCCCEEEEEEECCCCSSCEEC
T ss_pred CCCHHHHHHHHHHHHhcCCcccccCCCCCCCCCc--CCC-----------cceEeCCCCCCceEEEEECCCCCccCCccc
Confidence 5899999999999999965 58988889993 138 79999864334799999999999999 99
Q ss_pred CccccCCCCCCEEEccC-CcCCCcCcccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEEEeeCCcCCCCCCccccCC
Q 003737 109 PTELSKLRYLKQLDLSR-NCLTGSFSPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKL 186 (799)
Q Consensus 109 p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l 186 (799)
|..|.++++|++|+|++ |.+.+.+|..+..++ |++|+|++|++++.+|..|.++++|++|+|++|.+++.+|..|..+
T Consensus 69 ~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 148 (313)
T 1ogq_A 69 PSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSL 148 (313)
T ss_dssp CGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGC
T ss_pred ChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcC
Confidence 99999999999999995 999999999999988 9999999999999999999999999999999999999999999999
Q ss_pred CCCCEEEcccCcCCccCChhccCCC-CCCEEEccCCcCCCcCCccccCCCCCCEEEccCCCCCCCCchhhhcCCCCCeEE
Q 003737 187 INLQKLILSSNSFTGELPAELTKLT-NLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLR 265 (799)
Q Consensus 187 ~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 265 (799)
++|++|++++|++++.+|..+..++ +|++|++++|++++.+|..+..++ |++|+|++|.+++.+|..+..+++|+.|+
T Consensus 149 ~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 227 (313)
T 1ogq_A 149 PNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIH 227 (313)
T ss_dssp TTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEE
T ss_pred CCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEE
Confidence 9999999999999999999999998 999999999999999999999987 99999999999988888888888777776
Q ss_pred cCCCCCCCCCCCccCCCCccEEEccCCcCcccCCccccCCCCCCeeccccccCCCCCchhhhccCCCCEEeccCCcCCCc
Q 003737 266 ISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGP 345 (799)
Q Consensus 266 L~~n~~~~~~~~~l~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ 345 (799)
+++ |.+++.+|. +..+++|++|+|++|++++.+|..|..+++|+.|+|++|+++|.
T Consensus 228 L~~-----------------------N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 283 (313)
T 1ogq_A 228 LAK-----------------------NSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGE 283 (313)
T ss_dssp CCS-----------------------SEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEE
T ss_pred CCC-----------------------CceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCccccc
Confidence 665 333333333 44455555555555555555555555555555555555555555
Q ss_pred CChhh-hcCCCEEEeecCc-Ccc
Q 003737 346 VPKYI-FNSNKNVDISLNN-FTW 366 (799)
Q Consensus 346 ~p~~~-~~~l~~l~ls~N~-~~g 366 (799)
+|..- ...++.+++++|. ++|
T Consensus 284 ip~~~~l~~L~~l~l~~N~~lc~ 306 (313)
T 1ogq_A 284 IPQGGNLQRFDVSAYANNKCLCG 306 (313)
T ss_dssp CCCSTTGGGSCGGGTCSSSEEES
T ss_pred CCCCccccccChHHhcCCCCccC
Confidence 55431 2344555555555 444
No 2
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=5e-39 Score=379.69 Aligned_cols=326 Identities=20% Similarity=0.299 Sum_probs=275.0
Q ss_pred CCHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCcccCC-CCCCCCCCeEecCCCCcccEEEEEeCCCCCcccCCccccC
Q 003737 36 LHAEEVKALKQIGRKLGKKDWNFGVDPCSQKGNWELSSD-DKKGFESNVTCDCSSATCHVVTIALKAQNLTGTLPTELSK 114 (799)
Q Consensus 36 ~~~~~~~aL~~~~~~~~~~~W~~~~d~C~~~~~W~~~~~-~~~~~~~gv~c~~~~~~~~v~~L~L~~~~l~g~~p~~~~~ 114 (799)
....|++||.++|+++++.+|....++|....+|..... |.++...||+|+.. ++|+.|+|++++++|.+|++|++
T Consensus 27 ~~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c~w~~~~GV~C~~~---~~V~~L~L~~~~l~g~lp~~l~~ 103 (636)
T 4eco_A 27 EYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELDMWGAQPGVSLNSN---GRVTGLSLEGFGASGRVPDAIGQ 103 (636)
T ss_dssp HHHHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGGGTTCCTTEEECTT---CCEEEEECTTSCCEEEECGGGGG
T ss_pred hHHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCcccccCCCCeEEcCC---CCEEEEEecCcccCCcCChHHhc
Confidence 345799999999999988888766555544456865433 22333489999853 79999999999999999999999
Q ss_pred CCCCCEEEccCCcC------------------------------------------------------------------
Q 003737 115 LRYLKQLDLSRNCL------------------------------------------------------------------ 128 (799)
Q Consensus 115 l~~L~~L~Ls~N~l------------------------------------------------------------------ 128 (799)
|++|++|+|++|.+
T Consensus 104 L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l 183 (636)
T 4eco_A 104 LTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITL 183 (636)
T ss_dssp CTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCC
T ss_pred CccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccch
Confidence 99999999999843
Q ss_pred ------------CCcCcccccccc-eeEEEccCCcCcCc-----------------CCcccC--CCCCCCEEEeeCCcCC
Q 003737 129 ------------TGSFSPQWASLQ-LVELSVMGNRLSGP-----------------FPKVLT--NITTLKNLSIEGNLFT 176 (799)
Q Consensus 129 ------------~~~~p~~~~~l~-L~~L~Ls~N~l~~~-----------------~p~~~~--~L~~L~~L~Ls~N~l~ 176 (799)
++ +|..++.++ |++|+|++|.+++. +|..++ ++++|++|+|++|.+.
T Consensus 184 ~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~ 262 (636)
T 4eco_A 184 KDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNL 262 (636)
T ss_dssp CTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTC
T ss_pred hhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCC
Confidence 34 677888887 99999999999986 999999 9999999999999999
Q ss_pred CCCCccccCCCCCCEEEcccCc-CCc-cCChhccCC------CCCCEEEccCCcCCCcCCc--cccCCCCCCEEEccCCC
Q 003737 177 GSIPPDIRKLINLQKLILSSNS-FTG-ELPAELTKL------TNLNDLRISDNNFSGKIPE--FIGKWKKIQKLHIQGSS 246 (799)
Q Consensus 177 ~~~p~~~~~l~~L~~L~Ls~N~-l~~-~~p~~~~~l------~~L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~L~~N~ 246 (799)
+.+|..|+++++|++|++++|+ +++ .+|..++++ ++|++|++++|+++ .+|. .++++++|++|++++|+
T Consensus 263 ~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~ 341 (636)
T 4eco_A 263 TKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQ 341 (636)
T ss_dssp SSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCC
T ss_pred ccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCc
Confidence 9999999999999999999998 998 899988876 89999999999999 7888 89999999999999999
Q ss_pred CCCCCchhhhcCCCCCeEEcCCCCCCCCCCCc-cCC-CC-ccEEEccCCcCcccCCccccCCC--CCCeeccccccCCCC
Q 003737 247 LEGPIPASISALTSLTDLRISDLKGSESAFPK-LDK-MN-LKTLILTKCLIHGEIPDYIGDMT--KLKNIDLSFNNLTGG 321 (799)
Q Consensus 247 l~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~-l~~-~~-L~~L~L~~N~l~~~~p~~l~~l~--~L~~L~Ls~N~l~~~ 321 (799)
++|.+| .+..+++|+.|++++|... .+|. +.. .+ |+.|++++|.++ .+|..+..++ +|+.|++++|++++.
T Consensus 342 l~g~ip-~~~~l~~L~~L~L~~N~l~--~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~ 417 (636)
T 4eco_A 342 LEGKLP-AFGSEIKLASLNLAYNQIT--EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSV 417 (636)
T ss_dssp CEEECC-CCEEEEEESEEECCSSEEE--ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTT
T ss_pred Cccchh-hhCCCCCCCEEECCCCccc--cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCc
Confidence 998899 8999999999999986655 4444 444 67 999999999999 7888877655 899999999999999
Q ss_pred Cchhhh-------ccCCCCEEeccCCcCCCcCChhhh---cCCCEEEeecCcCcccCCCCC
Q 003737 322 IPTTFE-------KLAKTNFMYLTGNKLTGPVPKYIF---NSNKNVDISLNNFTWESSDPI 372 (799)
Q Consensus 322 ~p~~~~-------~l~~L~~L~L~~N~l~g~~p~~~~---~~l~~l~ls~N~~~g~~p~~~ 372 (799)
+|..|. .+++|+.|+|++|+++ .+|..++ ..++.|+|++|.++ .+|...
T Consensus 418 ~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~ 476 (636)
T 4eco_A 418 DGKNFDPLDPTPFKGINVSSINLSNNQIS-KFPKELFSTGSPLSSINLMGNMLT-EIPKNS 476 (636)
T ss_dssp TTCSSCTTCSSCCCCCCEEEEECCSSCCC-SCCTHHHHTTCCCSEEECCSSCCS-BCCSSS
T ss_pred chhhhcccccccccCCCCCEEECcCCccC-cCCHHHHccCCCCCEEECCCCCCC-CcCHHH
Confidence 998888 7889999999999999 6776654 46889999999998 666543
No 3
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=8.2e-38 Score=376.36 Aligned_cols=325 Identities=19% Similarity=0.280 Sum_probs=260.3
Q ss_pred cCCCCHHHHHHHHHHHHhcCCCCCCCCC-----CC--CCCCCCCcccCC-CCCCCCCCeEecCCCCcccEEEEEeCCCCC
Q 003737 33 ANKLHAEEVKALKQIGRKLGKKDWNFGV-----DP--CSQKGNWELSSD-DKKGFESNVTCDCSSATCHVVTIALKAQNL 104 (799)
Q Consensus 33 ~~~~~~~~~~aL~~~~~~~~~~~W~~~~-----d~--C~~~~~W~~~~~-~~~~~~~gv~c~~~~~~~~v~~L~L~~~~l 104 (799)
++.+..+|++||++||+++++++|+.+. +| | .|..... +..+...||+|++ .++|+.|+|+++++
T Consensus 263 ~~~~~~~d~~ALl~~k~~l~~~~W~~~~~~~~~~~~~C----~W~~~~~~~~w~~~~GV~C~~---~~~V~~L~Ls~~~L 335 (876)
T 4ecn_A 263 ETAEYIKDYKALKAIWEALDGKNWRYYSGTINNTIHSL----NWNFNKELDMWGDQPGVDLDN---NGRVTGLSLAGFGA 335 (876)
T ss_dssp CCCHHHHHHHHHHHHHHHTTGGGCCCCCSSCSSCCCCC----SCCCSSCGGGTTCCTTEEECT---TSCEEEEECTTTCC
T ss_pred ccccchHHHHHHHHHHHHcCCCCCCcCCCcccccCCcc----ccccccccccccCcCceEecC---CCCEEEEECccCCC
Confidence 3345578999999999999888997654 66 7 6744322 3334458999986 47999999999999
Q ss_pred cccCCccccCCCCCCEEEc-cCCcCCCc----------------------------------------------------
Q 003737 105 TGTLPTELSKLRYLKQLDL-SRNCLTGS---------------------------------------------------- 131 (799)
Q Consensus 105 ~g~~p~~~~~l~~L~~L~L-s~N~l~~~---------------------------------------------------- 131 (799)
.|.+|++|++|++|++||| ++|.+.|.
T Consensus 336 ~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~ 415 (876)
T 4ecn_A 336 KGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMK 415 (876)
T ss_dssp EEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSC
T ss_pred CCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCcccc
Confidence 9999999999999999999 77765444
Q ss_pred ------------------------Ccccccccc-eeEEEccCCcCcC-----------------cCCcccC--CCCCCCE
Q 003737 132 ------------------------FSPQWASLQ-LVELSVMGNRLSG-----------------PFPKVLT--NITTLKN 167 (799)
Q Consensus 132 ------------------------~p~~~~~l~-L~~L~Ls~N~l~~-----------------~~p~~~~--~L~~L~~ 167 (799)
+|..++.++ |++|+|++|+|++ .+|..++ ++++|++
T Consensus 416 ~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~ 495 (876)
T 4ecn_A 416 PIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTD 495 (876)
T ss_dssp CCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCE
T ss_pred ccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCE
Confidence 667777777 8999999999888 3888877 8899999
Q ss_pred EEeeCCcCCCCCCccccCCCCCCEEEcccCc-CCc-cCChhccCCC-------CCCEEEccCCcCCCcCCc--cccCCCC
Q 003737 168 LSIEGNLFTGSIPPDIRKLINLQKLILSSNS-FTG-ELPAELTKLT-------NLNDLRISDNNFSGKIPE--FIGKWKK 236 (799)
Q Consensus 168 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~-~~p~~~~~l~-------~L~~L~Ls~N~l~~~~p~--~~~~l~~ 236 (799)
|+|++|.+.+.+|..|+++++|++|+|++|+ +++ .+|..+++++ +|++|+|++|+++ .+|. .|+++++
T Consensus 496 L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~ 574 (876)
T 4ecn_A 496 VELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVK 574 (876)
T ss_dssp EEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTT
T ss_pred EECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCC
Confidence 9999998888888888889999999999987 887 7887666554 8999999999888 7787 8888889
Q ss_pred CCEEEccCCCCCCCCchhhhcCCCCCeEEcCCCCCCCCCCCc-cCC-CC-ccEEEccCCcCcccCCccccCCCC--CCee
Q 003737 237 IQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPK-LDK-MN-LKTLILTKCLIHGEIPDYIGDMTK--LKNI 311 (799)
Q Consensus 237 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~-l~~-~~-L~~L~L~~N~l~~~~p~~l~~l~~--L~~L 311 (799)
|++|+|++|+++ .+| .+..+++|+.|++++|.+. .+|. +.. .+ |+.|+|++|.++ .+|..+..++. |+.|
T Consensus 575 L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~--~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L 649 (876)
T 4ecn_A 575 LGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE--EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSV 649 (876)
T ss_dssp CCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS--CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEE
T ss_pred CCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc--cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEE
Confidence 999999999888 777 7888888899999886655 4553 554 66 889999999888 77877776654 8889
Q ss_pred ccccccCCCCCchh---hh--ccCCCCEEeccCCcCCCcCChhhh---cCCCEEEeecCcCcccCCCCC
Q 003737 312 DLSFNNLTGGIPTT---FE--KLAKTNFMYLTGNKLTGPVPKYIF---NSNKNVDISLNNFTWESSDPI 372 (799)
Q Consensus 312 ~Ls~N~l~~~~p~~---~~--~l~~L~~L~L~~N~l~g~~p~~~~---~~l~~l~ls~N~~~g~~p~~~ 372 (799)
+|++|++++.+|.. +. .+++|+.|+|++|+++ .+|..++ ..++.|+|++|.++ .+|..+
T Consensus 650 ~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~ 716 (876)
T 4ecn_A 650 DFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMT-SIPENS 716 (876)
T ss_dssp ECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCS-CCCTTS
T ss_pred ECcCCcCCCccccchhhhccccCCCcCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCC-ccChHH
Confidence 99999888866632 22 3457888999999888 6777665 46788999999888 666543
No 4
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=4.1e-38 Score=380.21 Aligned_cols=317 Identities=29% Similarity=0.426 Sum_probs=253.2
Q ss_pred cCCCCHHHHHHHHHHHHhcCC----CCCCCCCCCCCCCCCCcccCCCCCCCCCCeEecCCCCcccEEEEEeCCCCCccc-
Q 003737 33 ANKLHAEEVKALKQIGRKLGK----KDWNFGVDPCSQKGNWELSSDDKKGFESNVTCDCSSATCHVVTIALKAQNLTGT- 107 (799)
Q Consensus 33 ~~~~~~~~~~aL~~~~~~~~~----~~W~~~~d~C~~~~~W~~~~~~~~~~~~gv~c~~~~~~~~v~~L~L~~~~l~g~- 107 (799)
++...++|++||++||+++.+ ++|+.+.||| .| .||+|+ .++|+.|+|+++.+.|.
T Consensus 6 ~~~~~~~~~~all~~k~~~~~~~~l~~W~~~~~~C----~w-----------~gv~C~----~~~v~~L~L~~~~l~g~~ 66 (768)
T 3rgz_A 6 PSQSLYREIHQLISFKDVLPDKNLLPDWSSNKNPC----TF-----------DGVTCR----DDKVTSIDLSSKPLNVGF 66 (768)
T ss_dssp --CCHHHHHHHHHHHHTTCSCTTSSTTCCTTSCGG----GS-----------TTEEEE----TTEEEEEECTTSCCCEEH
T ss_pred cccCCHHHHHHHHHHHhhCCCcccccCCCCCCCCc----CC-----------cceEEC----CCcEEEEECCCCCcCCcc
Confidence 334468899999999999864 6898788999 79 799998 37999999999999987
Q ss_pred --CC-----------------------ccccCCCCCCEEEccCCcCCCcCcc--cccccc-eeEEEccCCcCcCcCCccc
Q 003737 108 --LP-----------------------TELSKLRYLKQLDLSRNCLTGSFSP--QWASLQ-LVELSVMGNRLSGPFPKVL 159 (799)
Q Consensus 108 --~p-----------------------~~~~~l~~L~~L~Ls~N~l~~~~p~--~~~~l~-L~~L~Ls~N~l~~~~p~~~ 159 (799)
+| ..|..+++|++|||++|.+++.+|. .++.++ |++|+|++|.+++.+|..+
T Consensus 67 ~~l~~~l~~L~~L~~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~ 146 (768)
T 3rgz_A 67 SAVSSSLLSLTGLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSG 146 (768)
T ss_dssp HHHHHHTTTCTTCCEEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCS
T ss_pred CccChhHhccCcccccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHH
Confidence 54 4667777888888888888777776 777776 8888888888877777665
Q ss_pred -CCCCCCCEEEeeCCcCCCCCCcc---ccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccCCcCCCcCCccccCCC
Q 003737 160 -TNITTLKNLSIEGNLFTGSIPPD---IRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWK 235 (799)
Q Consensus 160 -~~L~~L~~L~Ls~N~l~~~~p~~---~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 235 (799)
.++++|++|+|++|.+++..|.. +.++++|++|++++|.+++..|. ..+++|++|++++|++++.+|. +++++
T Consensus 147 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~--~~l~~L~~L~Ls~n~l~~~~~~-l~~l~ 223 (768)
T 3rgz_A 147 GLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDV--SRCVNLEFLDVSSNNFSTGIPF-LGDCS 223 (768)
T ss_dssp CCCCTTCSEEECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBC--TTCTTCCEEECCSSCCCSCCCB-CTTCC
T ss_pred hccCCCCCEEECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCc--ccCCcCCEEECcCCcCCCCCcc-cccCC
Confidence 67788888888888887766665 67778888888888887766553 7888999999999999887777 89999
Q ss_pred CCCEEEccCCCCCCCCchhhhcCCCCCeEEcCCCCCCCCCCCccCCCCccEEEccCCcCcccCCccccCC-CCCCeeccc
Q 003737 236 KIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDM-TKLKNIDLS 314 (799)
Q Consensus 236 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~l~~~~L~~L~L~~N~l~~~~p~~l~~l-~~L~~L~Ls 314 (799)
+|++|+|++|.+++.+|..+.++++|++|++++|.. .+.+|.....+|++|+|++|.+++.+|..+..+ ++|++|+|+
T Consensus 224 ~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l-~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls 302 (768)
T 3rgz_A 224 ALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQF-VGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLS 302 (768)
T ss_dssp SCCEEECCSSCCCSCHHHHTTTCSSCCEEECCSSCC-EESCCCCCCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECC
T ss_pred CCCEEECcCCcCCCcccHHHhcCCCCCEEECCCCcc-cCccCccccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECc
Confidence 999999999999999999999999999999998544 444555544778888888888888888877665 888888888
Q ss_pred cccCCCCCchhhhccCCCCEEeccCCcCCCcCChh-hh--cCCCEEEeecCcCcccCCCCC
Q 003737 315 FNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKY-IF--NSNKNVDISLNNFTWESSDPI 372 (799)
Q Consensus 315 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~-~~--~~l~~l~ls~N~~~g~~p~~~ 372 (799)
+|++++.+|..|..+++|+.|++++|+++|.+|.. +. ..++.|++++|.++|.+|..+
T Consensus 303 ~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l 363 (768)
T 3rgz_A 303 GNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESL 363 (768)
T ss_dssp SSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTH
T ss_pred CCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHH
Confidence 88888888888888888888888888888777765 32 356788888888887777665
No 5
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.6e-35 Score=357.58 Aligned_cols=277 Identities=30% Similarity=0.507 Sum_probs=179.4
Q ss_pred EEEEEeCCCCCcccCCccccC--CCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEEEe
Q 003737 94 VVTIALKAQNLTGTLPTELSK--LRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLSI 170 (799)
Q Consensus 94 v~~L~L~~~~l~g~~p~~~~~--l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L 170 (799)
++.|++++|.++|.+|+.+.. +++|++|++++|.+++.+|..+..++ |++|++++|++++.+|..++++++|++|+|
T Consensus 370 L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 449 (768)
T 3rgz_A 370 LLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKL 449 (768)
T ss_dssp CSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEEC
T ss_pred CcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEEC
Confidence 444444444444444444443 45555666666666556666666655 666666666666666666666666666666
Q ss_pred eCCcCCCCCCccccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccCCcCCCcCCccccCCCCCCEEEccCCCCCCC
Q 003737 171 EGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGP 250 (799)
Q Consensus 171 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 250 (799)
++|.+++.+|..+..+++|++|++++|++++.+|..+.++++|++|++++|++++.+|.+++.+++|++|+|++|++++.
T Consensus 450 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 529 (768)
T 3rgz_A 450 WLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGN 529 (768)
T ss_dssp CSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEE
T ss_pred CCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCc
Confidence 66666666666666666666666666666666666666666666666666666666666666666666666666666666
Q ss_pred CchhhhcCCCCCeEEcCCCCCCCCCCCc----------------------------------------------------
Q 003737 251 IPASISALTSLTDLRISDLKGSESAFPK---------------------------------------------------- 278 (799)
Q Consensus 251 ~p~~~~~l~~L~~L~L~~n~~~~~~~~~---------------------------------------------------- 278 (799)
+|..+.++++|+.|++++|... +.+|.
T Consensus 530 ~p~~l~~l~~L~~L~Ls~N~l~-g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 608 (768)
T 3rgz_A 530 IPAELGDCRSLIWLDLNTNLFN-GTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLS 608 (768)
T ss_dssp CCGGGGGCTTCCEEECCSSEEE-SBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGG
T ss_pred CCHHHcCCCCCCEEECCCCccC-CcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccc
Confidence 6666666666666666664321 11110
Q ss_pred -------------------cCC-CCccEEEccCCcCcccCCccccCCCCCCeeccccccCCCCCchhhhccCCCCEEecc
Q 003737 279 -------------------LDK-MNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLT 338 (799)
Q Consensus 279 -------------------l~~-~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 338 (799)
+.. .+|+.|+|++|+++|.+|..++++++|+.|+|++|+++|.+|..|+++++|+.|+|+
T Consensus 609 ~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs 688 (768)
T 3rgz_A 609 TRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLS 688 (768)
T ss_dssp GTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECC
T ss_pred cccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECC
Confidence 111 356677777777777777777777777777777777777777777777777777777
Q ss_pred CCcCCCcCChhhh--cCCCEEEeecCcCcccCCCC
Q 003737 339 GNKLTGPVPKYIF--NSNKNVDISLNNFTWESSDP 371 (799)
Q Consensus 339 ~N~l~g~~p~~~~--~~l~~l~ls~N~~~g~~p~~ 371 (799)
+|+++|.+|..+. ..++.||+++|+++|.||..
T Consensus 689 ~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~ 723 (768)
T 3rgz_A 689 SNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM 723 (768)
T ss_dssp SSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSS
T ss_pred CCcccCcCChHHhCCCCCCEEECcCCcccccCCCc
Confidence 7777777776654 35677777777777777653
No 6
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=4.7e-33 Score=315.51 Aligned_cols=281 Identities=17% Similarity=0.200 Sum_probs=231.4
Q ss_pred cccEEEEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCcC-cccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEE
Q 003737 91 TCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSF-SPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNL 168 (799)
Q Consensus 91 ~~~v~~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L 168 (799)
+.++++|+|++|.+++..|..|.++++|++|+|++|.+.+.+ +..|..++ |++|+|++|++++..|..|+++++|++|
T Consensus 29 ~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 108 (455)
T 3v47_A 29 PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVL 108 (455)
T ss_dssp CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEE
T ss_pred CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEE
Confidence 357999999999999998999999999999999999998655 56788887 9999999999999999999999999999
Q ss_pred EeeCCcCCCCCCcc--ccCCCCCCEEEcccCcCCccCChh-ccCCCCCCEEEccCCcCCCcCCccccCC-----------
Q 003737 169 SIEGNLFTGSIPPD--IRKLINLQKLILSSNSFTGELPAE-LTKLTNLNDLRISDNNFSGKIPEFIGKW----------- 234 (799)
Q Consensus 169 ~Ls~N~l~~~~p~~--~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~l----------- 234 (799)
+|++|.+++.+|.. |..+++|++|+|++|++++..|.. +.++++|++|++++|++++..|..+..+
T Consensus 109 ~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~ 188 (455)
T 3v47_A 109 TLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLS 188 (455)
T ss_dssp ECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECT
T ss_pred eCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhccccccccccccc
Confidence 99999998766555 999999999999999999887876 8899999999999999998888766544
Q ss_pred -----------------------CCCCEEEccCCCCCCCCchhhhcC---------------------------------
Q 003737 235 -----------------------KKIQKLHIQGSSLEGPIPASISAL--------------------------------- 258 (799)
Q Consensus 235 -----------------------~~L~~L~L~~N~l~~~~p~~~~~l--------------------------------- 258 (799)
++|++|++++|.+++..|..+...
T Consensus 189 ~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~ 268 (455)
T 3v47_A 189 SITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFT 268 (455)
T ss_dssp TCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTT
T ss_pred cCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCcccc
Confidence 578888888888876666554332
Q ss_pred ------CCCCeEEcCCCCCCCCCCCccCC-CCccEEEccCCcCcccCCccccCCCCCCeeccccccCCCCCchhhhccCC
Q 003737 259 ------TSLTDLRISDLKGSESAFPKLDK-MNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAK 331 (799)
Q Consensus 259 ------~~L~~L~L~~n~~~~~~~~~l~~-~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 331 (799)
++|+.|++++|.........+.. ++|+.|+|++|++++..|..|..+++|++|+|++|++++..|..|..+++
T Consensus 269 ~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 348 (455)
T 3v47_A 269 FKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDK 348 (455)
T ss_dssp TGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTT
T ss_pred cccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCccc
Confidence 46777777775544332223555 78888888888888888888888888888888888888777888888888
Q ss_pred CCEEeccCCcCCCcCChhhh--cCCCEEEeecCcCcccCCCC
Q 003737 332 TNFMYLTGNKLTGPVPKYIF--NSNKNVDISLNNFTWESSDP 371 (799)
Q Consensus 332 L~~L~L~~N~l~g~~p~~~~--~~l~~l~ls~N~~~g~~p~~ 371 (799)
|+.|+|++|++++..|..+. ..++.|++++|++++..+..
T Consensus 349 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 390 (455)
T 3v47_A 349 LEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGI 390 (455)
T ss_dssp CCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTT
T ss_pred CCEEECCCCcccccChhhccccccccEEECCCCccccCCHhH
Confidence 88888888888877776654 46788888888888655443
No 7
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=5.2e-33 Score=328.20 Aligned_cols=262 Identities=21% Similarity=0.308 Sum_probs=236.6
Q ss_pred CCcccCCccccCCCCCCEEEccCCcCCCc-----------------Cccccc--ccc-eeEEEccCCcCcCcCCcccCCC
Q 003737 103 NLTGTLPTELSKLRYLKQLDLSRNCLTGS-----------------FSPQWA--SLQ-LVELSVMGNRLSGPFPKVLTNI 162 (799)
Q Consensus 103 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~-----------------~p~~~~--~l~-L~~L~Ls~N~l~~~~p~~~~~L 162 (799)
+++| +|..|+++++|++|+|++|.+++. +|..++ .++ |++|+|++|++.+.+|..|+++
T Consensus 194 ~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l 272 (636)
T 4eco_A 194 NITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKAL 272 (636)
T ss_dssp EEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTC
T ss_pred CCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcC
Confidence 4446 899999999999999999999996 888888 887 9999999999999999999999
Q ss_pred CCCCEEEeeCCc-CCC-CCCccccCC------CCCCEEEcccCcCCccCCh--hccCCCCCCEEEccCCcCCCcCCcccc
Q 003737 163 TTLKNLSIEGNL-FTG-SIPPDIRKL------INLQKLILSSNSFTGELPA--ELTKLTNLNDLRISDNNFSGKIPEFIG 232 (799)
Q Consensus 163 ~~L~~L~Ls~N~-l~~-~~p~~~~~l------~~L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 232 (799)
++|++|+|++|+ +++ .+|..++.+ ++|++|++++|+++ .+|. .+.++++|++|++++|+++|.+| .|+
T Consensus 273 ~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~ 350 (636)
T 4eco_A 273 PEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFG 350 (636)
T ss_dssp SSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCE
T ss_pred CCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhC
Confidence 999999999998 998 899988887 99999999999999 8998 99999999999999999999999 999
Q ss_pred CCCCCCEEEccCCCCCCCCchhhhcCCC-CCeEEcCCCCCCCCCCCc-cCC---CCccEEEccCCcCcccCCcccc----
Q 003737 233 KWKKIQKLHIQGSSLEGPIPASISALTS-LTDLRISDLKGSESAFPK-LDK---MNLKTLILTKCLIHGEIPDYIG---- 303 (799)
Q Consensus 233 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~-L~~L~L~~n~~~~~~~~~-l~~---~~L~~L~L~~N~l~~~~p~~l~---- 303 (799)
.+++|++|+|++|+++ .+|..+..+++ |++|++++|... .+|. +.. .+|+.|++++|.+++.+|..+.
T Consensus 351 ~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~--~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~ 427 (636)
T 4eco_A 351 SEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK--YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDP 427 (636)
T ss_dssp EEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS--SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCS
T ss_pred CCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc--ccchhhhhcccCccCEEECcCCcCCCcchhhhccccc
Confidence 9999999999999999 78999999999 999999997755 4554 333 3799999999999999999988
Q ss_pred ---CCCCCCeeccccccCCCCCchhhhccCCCCEEeccCCcCCCcCChhhhc----------CCCEEEeecCcCcccCCC
Q 003737 304 ---DMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIFN----------SNKNVDISLNNFTWESSD 370 (799)
Q Consensus 304 ---~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~----------~l~~l~ls~N~~~g~~p~ 370 (799)
.+++|++|+|++|+++...+..+..+++|+.|+|++|+++ .+|...+. .++.|+|++|+++ .+|.
T Consensus 428 ~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~ 505 (636)
T 4eco_A 428 TPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSD 505 (636)
T ss_dssp SCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCG
T ss_pred ccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcCC-ccCh
Confidence 8889999999999999555555677999999999999999 78877654 7899999999999 6775
Q ss_pred CC
Q 003737 371 PI 372 (799)
Q Consensus 371 ~~ 372 (799)
.+
T Consensus 506 ~~ 507 (636)
T 4eco_A 506 DF 507 (636)
T ss_dssp GG
T ss_pred hh
Confidence 54
No 8
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.98 E-value=1e-31 Score=306.59 Aligned_cols=280 Identities=20% Similarity=0.216 Sum_probs=250.3
Q ss_pred cccEEEEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEEE
Q 003737 91 TCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLS 169 (799)
Q Consensus 91 ~~~v~~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~ 169 (799)
..+++.|+|++|++++..+..|.++++|++|+|++|.+++..|..|..++ |++|+|++|++++..+..|.++++|++|+
T Consensus 31 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 110 (477)
T 2id5_A 31 PTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLD 110 (477)
T ss_dssp CTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEE
T ss_pred CCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEE
Confidence 35789999999999998899999999999999999999999999999987 99999999999987778899999999999
Q ss_pred eeCCcCCCCCCccccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccCCcCCCcCCccccCCCCCCEEEccCCCCCC
Q 003737 170 IEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEG 249 (799)
Q Consensus 170 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 249 (799)
|++|.+++..|..|.++++|++|++++|.+++..|..|.++++|++|++++|++++..+..|..+++|+.|+|++|.+.+
T Consensus 111 Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~ 190 (477)
T 2id5_A 111 ISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINA 190 (477)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCE
T ss_pred CCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcE
Confidence 99999998888999999999999999999998889999999999999999999998777889999999999999999999
Q ss_pred CCchhhhcCCCCCeEEcCCCCCCCCCCCc-cCCCCccEEEccCCcCcccCCccccCCCCCCeeccccccCCCCCchhhhc
Q 003737 250 PIPASISALTSLTDLRISDLKGSESAFPK-LDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEK 328 (799)
Q Consensus 250 ~~p~~~~~l~~L~~L~L~~n~~~~~~~~~-l~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~ 328 (799)
..+..|..+++|+.|++++|+......+. +...+|+.|+|++|+++...+..+..+++|+.|+|++|++++..+..|..
T Consensus 191 ~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 270 (477)
T 2id5_A 191 IRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHE 270 (477)
T ss_dssp ECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTT
T ss_pred eChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccc
Confidence 88889999999999999986655443333 33368999999999999655567889999999999999999888888999
Q ss_pred cCCCCEEeccCCcCCCcCChhhh--cCCCEEEeecCcCcccCCC
Q 003737 329 LAKTNFMYLTGNKLTGPVPKYIF--NSNKNVDISLNNFTWESSD 370 (799)
Q Consensus 329 l~~L~~L~L~~N~l~g~~p~~~~--~~l~~l~ls~N~~~g~~p~ 370 (799)
+++|+.|+|++|++++..|..+. ..++.|||++|.+++..+.
T Consensus 271 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 314 (477)
T 2id5_A 271 LLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEES 314 (477)
T ss_dssp CTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGG
T ss_pred cccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHh
Confidence 99999999999999987777664 5788999999999875543
No 9
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.97 E-value=1.8e-32 Score=295.04 Aligned_cols=231 Identities=26% Similarity=0.408 Sum_probs=185.1
Q ss_pred CCCCEEEccCCcCCC--cCcccccccc-eeEEEccC-CcCcCcCCcccCCCCCCCEEEeeCCcCCCCCCccccCCCCCCE
Q 003737 116 RYLKQLDLSRNCLTG--SFSPQWASLQ-LVELSVMG-NRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQK 191 (799)
Q Consensus 116 ~~L~~L~Ls~N~l~~--~~p~~~~~l~-L~~L~Ls~-N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 191 (799)
.++++|+|++|.+++ .+|..+..++ |++|++++ |.+.+.+|..|+++++|++|+|++|.+++.+|..|.++++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 467778888888877 6777777776 77777773 7777777777777777777777777777777777777777777
Q ss_pred EEcccCcCCccCChhccCCCCCCEEEccCCcCCCcCCccccCCC-CCCEEEccCCCCCCCCchhhhcCCCCCeEEcCCCC
Q 003737 192 LILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWK-KIQKLHIQGSSLEGPIPASISALTSLTDLRISDLK 270 (799)
Q Consensus 192 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~ 270 (799)
|+|++|.+++.+|..+..+++|++|++++|++++.+|..++.++ +|++|+|++|++++.+|..+..++
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~----------- 198 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN----------- 198 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-----------
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-----------
Confidence 77777777777777777777777777777777777777777776 777777777777766666665443
Q ss_pred CCCCCCCccCCCCccEEEccCCcCcccCCccccCCCCCCeeccccccCCCCCchhhhccCCCCEEeccCCcCCCcCChhh
Q 003737 271 GSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYI 350 (799)
Q Consensus 271 ~~~~~~~~l~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~ 350 (799)
|+.|++++|.+++.+|..+..+++|+.|+|++|++++.+|. +..+++|++|+|++|++++.+|..+
T Consensus 199 -------------L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l 264 (313)
T 1ogq_A 199 -------------LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGL 264 (313)
T ss_dssp -------------CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGG
T ss_pred -------------ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHH
Confidence 56677778888888999999999999999999999987776 8899999999999999999999887
Q ss_pred h--cCCCEEEeecCcCcccCCCC
Q 003737 351 F--NSNKNVDISLNNFTWESSDP 371 (799)
Q Consensus 351 ~--~~l~~l~ls~N~~~g~~p~~ 371 (799)
. ..++.|+|++|+++|.+|..
T Consensus 265 ~~l~~L~~L~Ls~N~l~~~ip~~ 287 (313)
T 1ogq_A 265 TQLKFLHSLNVSFNNLCGEIPQG 287 (313)
T ss_dssp GGCTTCCEEECCSSEEEEECCCS
T ss_pred hcCcCCCEEECcCCcccccCCCC
Confidence 5 47899999999999999875
No 10
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.97 E-value=3.6e-32 Score=294.62 Aligned_cols=267 Identities=21% Similarity=0.312 Sum_probs=193.4
Q ss_pred CCCCHHHHHHHHHHHHhcC-C-----CCC----CCCCCCCCCCCCCcccCCCCCCCCCCeEecCC------CCcccEEEE
Q 003737 34 NKLHAEEVKALKQIGRKLG-K-----KDW----NFGVDPCSQKGNWELSSDDKKGFESNVTCDCS------SATCHVVTI 97 (799)
Q Consensus 34 ~~~~~~~~~aL~~~~~~~~-~-----~~W----~~~~d~C~~~~~W~~~~~~~~~~~~gv~c~~~------~~~~~v~~L 97 (799)
.....+|++||++||+.+. + .+| ....++| .| .|+.|... ....+|+.|
T Consensus 22 ~~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~----~~-----------~g~~~~~~~~~l~~~~~~~l~~L 86 (328)
T 4fcg_A 22 STALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIE----TR-----------TGRALKATADLLEDATQPGRVAL 86 (328)
T ss_dssp -CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSC----CS-----------HHHHHHHHHHHHHHHTSTTCCEE
T ss_pred cccCchHHHHHHHHHHhccCCchhhhhhhccccccccccc----cc-----------CCcchhhhHHHHhcccccceeEE
Confidence 3455789999999999872 2 346 3345666 57 67777421 023578889
Q ss_pred EeCCCCCcccCCccccCCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEEEeeCCcCC
Q 003737 98 ALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFT 176 (799)
Q Consensus 98 ~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~ 176 (799)
+|++++++ .+|+.+.++++|++|+|++|.++ .+|..++.++ |++|+|++|.++ .+|..++++++|++|+|++|++.
T Consensus 87 ~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~ 163 (328)
T 4fcg_A 87 ELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPEL 163 (328)
T ss_dssp EEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTC
T ss_pred EccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCc
Confidence 99998888 78888888888999988888888 6677777776 888888888887 67778888888888888887777
Q ss_pred CCCCccccC---------CCCCCEEEcccCcCCccCChhccCCCCCCEEEccCCcCCCcCCccccCCCCCCEEEccCCCC
Q 003737 177 GSIPPDIRK---------LINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSL 247 (799)
Q Consensus 177 ~~~p~~~~~---------l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 247 (799)
+.+|..+.. +++|++|+|++|+++ .+|..+.++++|++|++++|++++ +|..++.+++|++|+|++|++
T Consensus 164 ~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~ 241 (328)
T 4fcg_A 164 TELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTA 241 (328)
T ss_dssp CCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTT
T ss_pred cccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcc
Confidence 777776654 677777777777776 666667777777777777777763 455566667777777777666
Q ss_pred CCCCchhhhcCCCCCeEEcCCCCCCCCCCCccCCCCccEEEccCCcCcccCCccccCCCCCCeeccccccCCCCCchhhh
Q 003737 248 EGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFE 327 (799)
Q Consensus 248 ~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~l~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~ 327 (799)
.+.+|..+..+++| +.|+|++|.+.+.+|..+..+++|+.|+|++|++.+.+|..+.
T Consensus 242 ~~~~p~~~~~l~~L-----------------------~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~ 298 (328)
T 4fcg_A 242 LRNYPPIFGGRAPL-----------------------KRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIA 298 (328)
T ss_dssp CCBCCCCTTCCCCC-----------------------CEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGG
T ss_pred hhhhHHHhcCCCCC-----------------------CEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHh
Confidence 66666655555444 4444555566667777777888888888888888888888888
Q ss_pred ccCCCCEEeccCCcCC
Q 003737 328 KLAKTNFMYLTGNKLT 343 (799)
Q Consensus 328 ~l~~L~~L~L~~N~l~ 343 (799)
++++|+.+++..|.+.
T Consensus 299 ~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 299 QLPANCIILVPPHLQA 314 (328)
T ss_dssp GSCTTCEEECCGGGSC
T ss_pred hccCceEEeCCHHHHH
Confidence 8888888877776655
No 11
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.97 E-value=2.9e-30 Score=314.81 Aligned_cols=282 Identities=16% Similarity=0.168 Sum_probs=234.4
Q ss_pred cccEEEEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCcC-cccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEE
Q 003737 91 TCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSF-SPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNL 168 (799)
Q Consensus 91 ~~~v~~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L 168 (799)
+.+++.|+|++|.+++..|..|.++++|++|||++|.+.+.+ |..|..++ |++|+|++|.+++..|..|+++++|++|
T Consensus 23 p~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 102 (844)
T 3j0a_A 23 LNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFEL 102 (844)
T ss_dssp CTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCE
T ss_pred CCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEe
Confidence 468999999999999999999999999999999999766555 78899998 9999999999999999999999999999
Q ss_pred EeeCCcCCCCCCcc--ccCCCCCCEEEcccCcCCccCC-hhccCCCCCCEEEccCCcCCCcCCccccCC--CCCCEEEcc
Q 003737 169 SIEGNLFTGSIPPD--IRKLINLQKLILSSNSFTGELP-AELTKLTNLNDLRISDNNFSGKIPEFIGKW--KKIQKLHIQ 243 (799)
Q Consensus 169 ~Ls~N~l~~~~p~~--~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l--~~L~~L~L~ 243 (799)
+|++|.+++.+|.. |.++++|++|+|++|.+++..+ ..|+++++|++|+|++|.+++..|..+..+ ++|+.|+|+
T Consensus 103 ~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~ 182 (844)
T 3j0a_A 103 RLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLA 182 (844)
T ss_dssp ECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEEC
T ss_pred eCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECC
Confidence 99999999877765 9999999999999999997655 679999999999999999999889888877 789999999
Q ss_pred CCCCCCCCchhhhcCCC------CCeEEcCCCCCCCCCCC---------------------------------------c
Q 003737 244 GSSLEGPIPASISALTS------LTDLRISDLKGSESAFP---------------------------------------K 278 (799)
Q Consensus 244 ~N~l~~~~p~~~~~l~~------L~~L~L~~n~~~~~~~~---------------------------------------~ 278 (799)
.|.+.+..|..+..+.+ |+.|++++|........ .
T Consensus 183 ~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~ 262 (844)
T 3j0a_A 183 ANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAG 262 (844)
T ss_dssp CSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTT
T ss_pred CCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhc
Confidence 99888887777666555 88888887633211100 0
Q ss_pred cCCCCccEEEccCCcCcccCCccccCCCCCCeeccccccCCCCCchhhhccCCCCEEeccCCcCCCcCChhhh--cCCCE
Q 003737 279 LDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIF--NSNKN 356 (799)
Q Consensus 279 l~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~--~~l~~ 356 (799)
+...+|+.|+|++|.+++..|..+..+++|+.|+|++|++++..|..|..+++|+.|+|++|++++..|..+. ..++.
T Consensus 263 l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 342 (844)
T 3j0a_A 263 LARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAY 342 (844)
T ss_dssp TTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCE
T ss_pred cccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCE
Confidence 1114688888888888888888888888888888888888888888888888888888888888876666553 36788
Q ss_pred EEeecCcCcccCCCCC
Q 003737 357 VDISLNNFTWESSDPI 372 (799)
Q Consensus 357 l~ls~N~~~g~~p~~~ 372 (799)
|++++|.+++..+..+
T Consensus 343 L~L~~N~i~~~~~~~~ 358 (844)
T 3j0a_A 343 IDLQKNHIAIIQDQTF 358 (844)
T ss_dssp EECCSCCCCCCCSSCS
T ss_pred EECCCCCCCccChhhh
Confidence 8888888876655544
No 12
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.97 E-value=2.4e-30 Score=295.28 Aligned_cols=275 Identities=18% Similarity=0.186 Sum_probs=250.2
Q ss_pred cccEEEEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEEE
Q 003737 91 TCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLS 169 (799)
Q Consensus 91 ~~~v~~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~ 169 (799)
..++++|+|++|.+++..|..|.++++|++|+|++|++++.++..|..++ |++|+|++|++++..|..|.++++|++|+
T Consensus 55 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 134 (477)
T 2id5_A 55 FPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLE 134 (477)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEE
Confidence 35799999999999999999999999999999999999988888888887 99999999999999999999999999999
Q ss_pred eeCCcCCCCCCccccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccCCcCCCcCCccccCCCCCCEEEccCCCCCC
Q 003737 170 IEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEG 249 (799)
Q Consensus 170 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 249 (799)
|++|.+++..|..|.++++|++|+|++|++++..+..+.++++|+.|++++|.+.+..+..|..+++|++|++++|.+.+
T Consensus 135 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~ 214 (477)
T 2id5_A 135 VGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLD 214 (477)
T ss_dssp ECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCC
T ss_pred CCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCcccc
Confidence 99999998888899999999999999999997777789999999999999999999888899999999999999999988
Q ss_pred CCchhhhcCCCCCeEEcCCCCCCCCCCCccCC-CCccEEEccCCcCcccCCccccCCCCCCeeccccccCCCCCchhhhc
Q 003737 250 PIPASISALTSLTDLRISDLKGSESAFPKLDK-MNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEK 328 (799)
Q Consensus 250 ~~p~~~~~l~~L~~L~L~~n~~~~~~~~~l~~-~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~ 328 (799)
.+|.......+|+.|++++|++.......+.. .+|+.|+|++|.+++..+..|..+++|+.|+|++|++++..|..|..
T Consensus 215 ~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 294 (477)
T 2id5_A 215 TMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRG 294 (477)
T ss_dssp EECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTT
T ss_pred ccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcC
Confidence 88888777889999999997665432223555 89999999999999988889999999999999999999999999999
Q ss_pred cCCCCEEeccCCcCCCcCChhh--hcCCCEEEeecCcCc
Q 003737 329 LAKTNFMYLTGNKLTGPVPKYI--FNSNKNVDISLNNFT 365 (799)
Q Consensus 329 l~~L~~L~L~~N~l~g~~p~~~--~~~l~~l~ls~N~~~ 365 (799)
+++|+.|+|++|++++..+..+ ...++.|+|++|.+.
T Consensus 295 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 333 (477)
T 2id5_A 295 LNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLA 333 (477)
T ss_dssp CTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEE
T ss_pred cccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCcc
Confidence 9999999999999996444433 247899999999886
No 13
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.97 E-value=9.1e-30 Score=282.70 Aligned_cols=266 Identities=17% Similarity=0.140 Sum_probs=213.7
Q ss_pred ccEEEEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEEEe
Q 003737 92 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLSI 170 (799)
Q Consensus 92 ~~v~~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L 170 (799)
.+++.|+++++.++...+..|..+++|++|+|++|.+++..+..|..++ |++|+|++|.+++..|..|+++++|++|+|
T Consensus 45 ~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 124 (390)
T 3o6n_A 45 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 124 (390)
T ss_dssp CCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEEC
Confidence 5688899999998865555678999999999999999988888898887 999999999999988899999999999999
Q ss_pred eCCcCCCCCCccccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccCCcCCCcCCccccCCCCC-------------
Q 003737 171 EGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKI------------- 237 (799)
Q Consensus 171 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L------------- 237 (799)
++|.++...+..|.++++|++|++++|.+++..|..+..+++|++|++++|++++.. +..+++|
T Consensus 125 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~---~~~l~~L~~L~l~~n~l~~~ 201 (390)
T 3o6n_A 125 ERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLSTL 201 (390)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCC---GGGCTTCSEEECCSSCCSEE
T ss_pred CCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccc---cccccccceeeccccccccc
Confidence 999998544455789999999999999999888888999999999999999998653 3334444
Q ss_pred ------CEEEccCCCCCCCCchhhhcCCCCCeEEcCCCCCCCCCCCccCC-CCccEEEccCCcCcccCCccccCCCCCCe
Q 003737 238 ------QKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDK-MNLKTLILTKCLIHGEIPDYIGDMTKLKN 310 (799)
Q Consensus 238 ------~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~l~~-~~L~~L~L~~N~l~~~~p~~l~~l~~L~~ 310 (799)
++|++++|.++.. |. ...++|+.|++++|.... .+.+.. ++|+.|+|++|.+++..|..+..+++|++
T Consensus 202 ~~~~~L~~L~l~~n~l~~~-~~--~~~~~L~~L~l~~n~l~~--~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 276 (390)
T 3o6n_A 202 AIPIAVEELDASHNSINVV-RG--PVNVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLER 276 (390)
T ss_dssp ECCSSCSEEECCSSCCCEE-EC--CCCSSCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCE
T ss_pred CCCCcceEEECCCCeeeec-cc--cccccccEEECCCCCCcc--cHHHcCCCCccEEECCCCcCCCcChhHccccccCCE
Confidence 4444555544432 22 123578888888765543 244555 78999999999998888888999999999
Q ss_pred eccccccCCCCCchhhhccCCCCEEeccCCcCCCcCChhh--hcCCCEEEeecCcCccc
Q 003737 311 IDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYI--FNSNKNVDISLNNFTWE 367 (799)
Q Consensus 311 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~--~~~l~~l~ls~N~~~g~ 367 (799)
|+|++|++++ +|..+..+++|+.|++++|+++ .+|..+ +..++.|++++|.++..
T Consensus 277 L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~ 333 (390)
T 3o6n_A 277 LYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL 333 (390)
T ss_dssp EECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC
T ss_pred EECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCcccee
Confidence 9999999985 5666778889999999999988 456554 36788999999988755
No 14
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.97 E-value=9.6e-30 Score=298.37 Aligned_cols=268 Identities=16% Similarity=0.134 Sum_probs=215.1
Q ss_pred ccEEEEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEEEe
Q 003737 92 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLSI 170 (799)
Q Consensus 92 ~~v~~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L 170 (799)
.+++.++++++.+....+..|..+++|++|+|++|.+++.+|..|..++ |++|+|++|.+++..|..|+++++|++|+|
T Consensus 51 ~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 130 (597)
T 3oja_B 51 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 130 (597)
T ss_dssp CCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEe
Confidence 4578899999998876666788899999999999999998888999887 999999999999988889999999999999
Q ss_pred eCCcCCCCCCccccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccCCcCCCcCCccccCCCCCCEEEccCCCCCCC
Q 003737 171 EGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGP 250 (799)
Q Consensus 171 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 250 (799)
++|.+++..+..|+++++|++|+|++|.+++..|..|..+++|++|++++|.+++.. ++.+++|+.|++++|.+++.
T Consensus 131 ~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~l 207 (597)
T 3oja_B 131 ERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLSTL 207 (597)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCSEE
T ss_pred eCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCccccc
Confidence 999999665566799999999999999999888888999999999999999998653 33344555555554444321
Q ss_pred ------------------CchhhhcCCCCCeEEcCCCCCCCCCCCccCC-CCccEEEccCCcCcccCCccccCCCCCCee
Q 003737 251 ------------------IPASISALTSLTDLRISDLKGSESAFPKLDK-MNLKTLILTKCLIHGEIPDYIGDMTKLKNI 311 (799)
Q Consensus 251 ------------------~p~~~~~l~~L~~L~L~~n~~~~~~~~~l~~-~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 311 (799)
++..+ .++|+.|++++|.... .+.+.. ++|+.|+|++|.+++.+|..|..+++|+.|
T Consensus 208 ~~~~~L~~L~ls~n~l~~~~~~~--~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 283 (597)
T 3oja_B 208 AIPIAVEELDASHNSINVVRGPV--NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERL 283 (597)
T ss_dssp ECCTTCSEEECCSSCCCEEECSC--CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEE
T ss_pred cCCchhheeeccCCccccccccc--CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEE
Confidence 11111 2467777777755443 244555 789999999999998888889999999999
Q ss_pred ccccccCCCCCchhhhccCCCCEEeccCCcCCCcCChhh--hcCCCEEEeecCcCcccC
Q 003737 312 DLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYI--FNSNKNVDISLNNFTWES 368 (799)
Q Consensus 312 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~--~~~l~~l~ls~N~~~g~~ 368 (799)
+|++|++++ +|..+..+++|+.|+|++|+++ .+|..+ +..++.|+|++|.+++..
T Consensus 284 ~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~ 340 (597)
T 3oja_B 284 YISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK 340 (597)
T ss_dssp ECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC
T ss_pred ECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCcC
Confidence 999999986 5777778899999999999998 566655 457889999999987653
No 15
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.97 E-value=1e-29 Score=288.14 Aligned_cols=272 Identities=21% Similarity=0.217 Sum_probs=234.2
Q ss_pred EEeCCCCCcccCCccccCCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCcCcCcC-CcccCCCCCCCEEEeeCCc
Q 003737 97 IALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNRLSGPF-PKVLTNITTLKNLSIEGNL 174 (799)
Q Consensus 97 L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~-p~~~~~L~~L~~L~Ls~N~ 174 (799)
+++++++++ .+|. + .++|++|+|++|.+++..|..|..++ |++|+|++|.+.+.+ |..|.++++|++|+|++|.
T Consensus 15 ~~c~~~~l~-~lp~-l--~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~ 90 (455)
T 3v47_A 15 AICINRGLH-QVPE-L--PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQ 90 (455)
T ss_dssp EECCSSCCS-SCCC-C--CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCT
T ss_pred cCcCCCCcc-cCCC-C--CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCc
Confidence 455566666 5665 3 27899999999999999999999998 999999999998655 6789999999999999999
Q ss_pred CCCCCCccccCCCCCCEEEcccCcCCccCChh--ccCCCCCCEEEccCCcCCCcCCcc-ccCCCCCCEEEccCCCCCCCC
Q 003737 175 FTGSIPPDIRKLINLQKLILSSNSFTGELPAE--LTKLTNLNDLRISDNNFSGKIPEF-IGKWKKIQKLHIQGSSLEGPI 251 (799)
Q Consensus 175 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~--~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~ 251 (799)
+++..|..|+++++|++|+|++|++++.+|.. |.++++|++|++++|++++..|.. +.++++|++|++++|.+++..
T Consensus 91 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 170 (455)
T 3v47_A 91 FLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSIC 170 (455)
T ss_dssp TCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCC
T ss_pred cCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccC
Confidence 99888999999999999999999999866655 999999999999999999887876 899999999999999999888
Q ss_pred chhhhcC----------------------------------CCCCeEEcCCCCCCCCC----------------------
Q 003737 252 PASISAL----------------------------------TSLTDLRISDLKGSESA---------------------- 275 (799)
Q Consensus 252 p~~~~~l----------------------------------~~L~~L~L~~n~~~~~~---------------------- 275 (799)
|..+..+ ++|++|++++|......
T Consensus 171 ~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~ 250 (455)
T 3v47_A 171 EEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSY 250 (455)
T ss_dssp TTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCT
T ss_pred hhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeecccc
Confidence 8776654 57888888876442100
Q ss_pred ------------------CCccCCCCccEEEccCCcCcccCCccccCCCCCCeeccccccCCCCCchhhhccCCCCEEec
Q 003737 276 ------------------FPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYL 337 (799)
Q Consensus 276 ------------------~~~l~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 337 (799)
+..+...+|+.|++++|.+++.+|..+..+++|++|+|++|++++..|..|..+++|+.|+|
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 330 (455)
T 3v47_A 251 NMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNL 330 (455)
T ss_dssp TTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEEC
Confidence 00111247999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcCCCcCChhhh--cCCCEEEeecCcCcccCCCCC
Q 003737 338 TGNKLTGPVPKYIF--NSNKNVDISLNNFTWESSDPI 372 (799)
Q Consensus 338 ~~N~l~g~~p~~~~--~~l~~l~ls~N~~~g~~p~~~ 372 (799)
++|++++..|..+. ..++.|||++|.+++..|..+
T Consensus 331 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 367 (455)
T 3v47_A 331 SQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSF 367 (455)
T ss_dssp CSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTT
T ss_pred CCCccCCcChhHhcCcccCCEEECCCCcccccChhhc
Confidence 99999977776653 578999999999999888766
No 16
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.97 E-value=1.6e-29 Score=298.26 Aligned_cols=136 Identities=22% Similarity=0.244 Sum_probs=125.1
Q ss_pred cccEEEEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEEE
Q 003737 91 TCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLS 169 (799)
Q Consensus 91 ~~~v~~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~ 169 (799)
+..+++|||++|+|++..+.+|.++++|++|||++|+|+++.+..|..++ |++|+|++|+|++..+..|.++++|++|+
T Consensus 51 p~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~ 130 (635)
T 4g8a_A 51 PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 130 (635)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEE
T ss_pred CcCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEE
Confidence 45799999999999988888999999999999999999999999999997 99999999999988888999999999999
Q ss_pred eeCCcCCCCCCccccCCCCCCEEEcccCcCCc-cCChhccCCCCCCEEEccCCcCCCc
Q 003737 170 IEGNLFTGSIPPDIRKLINLQKLILSSNSFTG-ELPAELTKLTNLNDLRISDNNFSGK 226 (799)
Q Consensus 170 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~ 226 (799)
|++|++++..+..|+++++|++|+|++|.+++ .+|..+..+++|++|++++|++++.
T Consensus 131 Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~ 188 (635)
T 4g8a_A 131 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSI 188 (635)
T ss_dssp CTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEE
T ss_pred CCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCcccccc
Confidence 99999998777789999999999999999975 4688899999999999999987653
No 17
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.97 E-value=1.3e-29 Score=298.06 Aligned_cols=139 Identities=27% Similarity=0.303 Sum_probs=125.7
Q ss_pred cccEEEEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEEE
Q 003737 91 TCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLS 169 (799)
Q Consensus 91 ~~~v~~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~ 169 (799)
+.++++|+|++|.+++..+..|.++++|++|+|++|.+++..|..|..++ |++|+|++|.+++..|..|+++++|++|+
T Consensus 31 ~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 110 (606)
T 3vq2_A 31 PSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLV 110 (606)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEE
T ss_pred CCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEE
Confidence 46799999999999988888999999999999999999998899998887 99999999999988899999999999999
Q ss_pred eeCCcCCCCCCccccCCCCCCEEEcccCcCCc-cCChhccCCCCCCEEEccCCcCCCcCCc
Q 003737 170 IEGNLFTGSIPPDIRKLINLQKLILSSNSFTG-ELPAELTKLTNLNDLRISDNNFSGKIPE 229 (799)
Q Consensus 170 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 229 (799)
|++|.+++..|..|+++++|++|++++|.+++ .+|..|.++++|++|++++|++++..|.
T Consensus 111 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~ 171 (606)
T 3vq2_A 111 AVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVN 171 (606)
T ss_dssp CTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTT
T ss_pred ccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChh
Confidence 99999987777889999999999999999986 6799999999999999999988765554
No 18
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.97 E-value=1.3e-29 Score=298.03 Aligned_cols=276 Identities=20% Similarity=0.209 Sum_probs=175.3
Q ss_pred cEEEEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEEEee
Q 003737 93 HVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLSIE 171 (799)
Q Consensus 93 ~v~~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls 171 (799)
+++.|+++++.+++..+..|..+++|++|++++|+++ .+|..+..++ |++|++++|.+++..|..+.++++|++|+++
T Consensus 255 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 333 (606)
T 3t6q_A 255 SVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIK 333 (606)
T ss_dssp EEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECC
T ss_pred ceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECC
Confidence 5777777777777666666777777777777777776 4455566655 7777777777776666667777777777777
Q ss_pred CCcCCCCCCcc-ccCCCCCCEEEcccCcCCccC--ChhccCCCCCCEEEccCCcCCCcCCccccCCCCCCEEEccCCCCC
Q 003737 172 GNLFTGSIPPD-IRKLINLQKLILSSNSFTGEL--PAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLE 248 (799)
Q Consensus 172 ~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 248 (799)
+|.+.+.+|.. +..+++|++|++++|.+++.. |..+..+++|++|++++|++.+..|..|..+++|++|++++|.++
T Consensus 334 ~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 413 (606)
T 3t6q_A 334 GNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLK 413 (606)
T ss_dssp SCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEE
T ss_pred CCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCC
Confidence 77766555543 666777777777777666544 556666667777777777666666666666666666666666666
Q ss_pred CCCch-hhhcCCCCCeEEcCCCCCCCCCCCccCC-CCccEEEccCCcCccc---CCccccCCCCCCeeccccccCCCCCc
Q 003737 249 GPIPA-SISALTSLTDLRISDLKGSESAFPKLDK-MNLKTLILTKCLIHGE---IPDYIGDMTKLKNIDLSFNNLTGGIP 323 (799)
Q Consensus 249 ~~~p~-~~~~l~~L~~L~L~~n~~~~~~~~~l~~-~~L~~L~L~~N~l~~~---~p~~l~~l~~L~~L~Ls~N~l~~~~p 323 (799)
+..|. .+..+++|+.|++++|.........+.. ++|++|++++|.+++. .+..+..+++|++|++++|++++..|
T Consensus 414 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~ 493 (606)
T 3t6q_A 414 VKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQ 493 (606)
T ss_dssp CCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECT
T ss_pred CcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccCh
Confidence 55443 3666666666666664433222222443 5666666666666542 22445666666666666666666666
Q ss_pred hhhhccCCCCEEeccCCcCCCcCChhhh--cCCCEEEeecCcCcccCCC
Q 003737 324 TTFEKLAKTNFMYLTGNKLTGPVPKYIF--NSNKNVDISLNNFTWESSD 370 (799)
Q Consensus 324 ~~~~~l~~L~~L~L~~N~l~g~~p~~~~--~~l~~l~ls~N~~~g~~p~ 370 (799)
..|..+++|+.|+|++|++++..|..+. ..+ .|++++|++++.+|.
T Consensus 494 ~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~ 541 (606)
T 3t6q_A 494 HAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPS 541 (606)
T ss_dssp TTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGG
T ss_pred hhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHh
Confidence 6666666666666666666665555443 234 666666666655443
No 19
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.97 E-value=9.6e-30 Score=293.50 Aligned_cols=273 Identities=16% Similarity=0.172 Sum_probs=201.5
Q ss_pred ccEEEEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEEEe
Q 003737 92 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLSI 170 (799)
Q Consensus 92 ~~v~~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L 170 (799)
.+++.|+|++|.+++..|..|..+++|++|+|++|++++..|..|..++ |++|+|++|+++ .+|.. .+++|++|+|
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 97 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDL 97 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEEC
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEec
Confidence 5788899999998877778888899999999999998888888888887 999999999888 45555 7888889999
Q ss_pred eCCcCCC-CCCccccCCCCCCEEEcccCcCCccCChhccCCCCC--CEEEccCCcC--CCcCCccccCCC----------
Q 003737 171 EGNLFTG-SIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNL--NDLRISDNNF--SGKIPEFIGKWK---------- 235 (799)
Q Consensus 171 s~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L--~~L~Ls~N~l--~~~~p~~~~~l~---------- 235 (799)
++|.+++ .+|..|+++++|++|++++|.+++ ..+..+++| ++|++++|.+ .+..|..+..+.
T Consensus 98 ~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~ 174 (520)
T 2z7x_B 98 SFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPT 174 (520)
T ss_dssp CSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCS
T ss_pred cCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccccccccccccccccceEEEEecc
Confidence 9888886 467888888888888888888875 345555555 7777777666 555555544422
Q ss_pred -------------------------------------------------------------------------CCCEEEc
Q 003737 236 -------------------------------------------------------------------------KIQKLHI 242 (799)
Q Consensus 236 -------------------------------------------------------------------------~L~~L~L 242 (799)
+|++|++
T Consensus 175 n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l 254 (520)
T 2z7x_B 175 NKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSI 254 (520)
T ss_dssp SSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEE
T ss_pred CcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEe
Confidence 5566666
Q ss_pred cCCCCCCCCchhh-----hcCCCCCeEEcC--------------------------CCCCCCCCCCccCC-CCccEEEcc
Q 003737 243 QGSSLEGPIPASI-----SALTSLTDLRIS--------------------------DLKGSESAFPKLDK-MNLKTLILT 290 (799)
Q Consensus 243 ~~N~l~~~~p~~~-----~~l~~L~~L~L~--------------------------~n~~~~~~~~~l~~-~~L~~L~L~ 290 (799)
++|+++|.+|..+ .++++|+.++++ +|......++ .. .+|++|+++
T Consensus 255 ~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~--~~l~~L~~L~Ls 332 (520)
T 2z7x_B 255 SNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCP--SKISPFLHLDFS 332 (520)
T ss_dssp EEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCCCSCTHHHHHHHHTCCCSEEEEESSCCCCCCCC--SSCCCCCEEECC
T ss_pred ecccccCccccchhhcccccCceeEeccccccceecchhhhhcccccCceeEEEcCCCccccccch--hhCCcccEEEeE
Confidence 6666666666555 444444444444 3332221111 23 678888888
Q ss_pred CCcCcccCCccccCCCCCCeeccccccCCC--CCchhhhccCCCCEEeccCCcCCCcCChhhh---cCCCEEEeecCcCc
Q 003737 291 KCLIHGEIPDYIGDMTKLKNIDLSFNNLTG--GIPTTFEKLAKTNFMYLTGNKLTGPVPKYIF---NSNKNVDISLNNFT 365 (799)
Q Consensus 291 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~---~~l~~l~ls~N~~~ 365 (799)
+|++++.+|..+..+++|++|++++|++++ .+|..+..+++|+.|++++|++++.+|...+ ..++.|++++|.++
T Consensus 333 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~ 412 (520)
T 2z7x_B 333 NNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILT 412 (520)
T ss_dssp SSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCC
T ss_pred CCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCC
Confidence 888888888888888888888888888886 5667788888888888888888876776533 46788888888888
Q ss_pred ccCCCCC
Q 003737 366 WESSDPI 372 (799)
Q Consensus 366 g~~p~~~ 372 (799)
+.+|..+
T Consensus 413 ~~~~~~l 419 (520)
T 2z7x_B 413 DTIFRCL 419 (520)
T ss_dssp GGGGGSC
T ss_pred cchhhhh
Confidence 7776544
No 20
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.96 E-value=3.6e-29 Score=294.27 Aligned_cols=272 Identities=21% Similarity=0.267 Sum_probs=231.0
Q ss_pred ccEEEEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCcCcCcCCc-ccCCCCCCCEEE
Q 003737 92 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNRLSGPFPK-VLTNITTLKNLS 169 (799)
Q Consensus 92 ~~v~~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~-~~~~L~~L~~L~ 169 (799)
.+++.|++++|.++ .+|..+..+++|++|++++|.+++..|..+..++ |++|++++|.+.+.+|. .+..+++|++|+
T Consensus 278 ~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~ 356 (606)
T 3t6q_A 278 SGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELD 356 (606)
T ss_dssp TTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEE
T ss_pred cCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcCCEEE
Confidence 57889999999988 7888889999999999999999988888888887 99999999988876665 488899999999
Q ss_pred eeCCcCCCCC--CccccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccCCcCCCcCCcc-ccCCCCCCEEEccCCC
Q 003737 170 IEGNLFTGSI--PPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEF-IGKWKKIQKLHIQGSS 246 (799)
Q Consensus 170 Ls~N~l~~~~--p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~L~~N~ 246 (799)
+++|.+++.. |..+..+++|++|++++|++++..|..|..+++|++|++++|++++..|.. +..+++|++|++++|.
T Consensus 357 l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~ 436 (606)
T 3t6q_A 357 LSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSL 436 (606)
T ss_dssp CCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCC
T ss_pred CCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCc
Confidence 9999988655 677888999999999999998888888899999999999999988776554 8889999999999999
Q ss_pred CCCCCchhhhcCCCCCeEEcCCCCCCCCCCC---ccCC-CCccEEEccCCcCcccCCccccCCCCCCeeccccccCCCCC
Q 003737 247 LEGPIPASISALTSLTDLRISDLKGSESAFP---KLDK-MNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGI 322 (799)
Q Consensus 247 l~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~---~l~~-~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~ 322 (799)
+++..|..+..+++|++|++++|......++ .+.. .+|+.|++++|++++..|..+..+++|+.|+|++|++++..
T Consensus 437 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 516 (606)
T 3t6q_A 437 LDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSS 516 (606)
T ss_dssp CBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGG
T ss_pred cCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCC
Confidence 9888888888999999999998766553332 2444 78999999999999888888999999999999999999888
Q ss_pred chhhhccCCCCEEeccCCcCCCcCChhh--hcCCCEEEeecCcCc
Q 003737 323 PTTFEKLAKTNFMYLTGNKLTGPVPKYI--FNSNKNVDISLNNFT 365 (799)
Q Consensus 323 p~~~~~l~~L~~L~L~~N~l~g~~p~~~--~~~l~~l~ls~N~~~ 365 (799)
|..|..++.| .|++++|++++..|..+ ...++.+++++|.++
T Consensus 517 ~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 560 (606)
T 3t6q_A 517 IEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLD 560 (606)
T ss_dssp GGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEE
T ss_pred hhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCcc
Confidence 8899999999 99999999997777654 357889999999876
No 21
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.96 E-value=1e-29 Score=295.28 Aligned_cols=274 Identities=20% Similarity=0.212 Sum_probs=217.3
Q ss_pred ccEEEEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEEEe
Q 003737 92 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLSI 170 (799)
Q Consensus 92 ~~v~~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L 170 (799)
.++++|+|++|++++..|..|.++++|++|+|++|++++.+|..|..++ |++|+|++|++++..|..|+++++|++|+|
T Consensus 26 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 105 (549)
T 2z81_A 26 AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNL 105 (549)
T ss_dssp TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEEC
T ss_pred CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEEC
Confidence 5799999999999999899999999999999999999999999999987 999999999999888888999999999999
Q ss_pred eCCcCCC-CCCccccCCCCCCEEEcccCcCCccCC-hhccCCCCCCEEEccCCcCCCcCCccccCCCCCCEEEccCCCCC
Q 003737 171 EGNLFTG-SIPPDIRKLINLQKLILSSNSFTGELP-AELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLE 248 (799)
Q Consensus 171 s~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 248 (799)
++|.+++ ..|..++++++|++|++++|.+.+.+| ..|.++++|++|++++|++++..|..++.+++|++|+++.|.+.
T Consensus 106 s~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~ 185 (549)
T 2z81_A 106 MGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESA 185 (549)
T ss_dssp TTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBST
T ss_pred CCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCccc
Confidence 9999986 457789999999999999999555565 68999999999999999999888888776555555544444433
Q ss_pred CCCchhhhcCCCCCeEEcCCCCCCC-------------------------------------------------------
Q 003737 249 GPIPASISALTSLTDLRISDLKGSE------------------------------------------------------- 273 (799)
Q Consensus 249 ~~~p~~~~~l~~L~~L~L~~n~~~~------------------------------------------------------- 273 (799)
......+..+++|++|++++|+...
T Consensus 186 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~ 265 (549)
T 2z81_A 186 FLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNG 265 (549)
T ss_dssp THHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEEC
T ss_pred ccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhhccccccccccccccc
Confidence 2111112233333333333322211
Q ss_pred ---------------------------------------------------------CCCCc-c-CC-CCccEEEccCCc
Q 003737 274 ---------------------------------------------------------SAFPK-L-DK-MNLKTLILTKCL 293 (799)
Q Consensus 274 ---------------------------------------------------------~~~~~-l-~~-~~L~~L~L~~N~ 293 (799)
..+|. + .. .+|+.|++++|+
T Consensus 266 ~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~~ip~~~~~~l~~L~~L~Ls~N~ 345 (549)
T 2z81_A 266 LGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENL 345 (549)
T ss_dssp CSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCCCCCHHHHHHCTTCCEEECCSSC
T ss_pred cccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccccCCHHHHhcCccccEEEccCCc
Confidence 01222 1 22 689999999999
Q ss_pred CcccCCc---cccCCCCCCeeccccccCCCCCc--hhhhccCCCCEEeccCCcCCCcCChhhh--cCCCEEEeecCcCcc
Q 003737 294 IHGEIPD---YIGDMTKLKNIDLSFNNLTGGIP--TTFEKLAKTNFMYLTGNKLTGPVPKYIF--NSNKNVDISLNNFTW 366 (799)
Q Consensus 294 l~~~~p~---~l~~l~~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~L~L~~N~l~g~~p~~~~--~~l~~l~ls~N~~~g 366 (799)
+++.+|. .++.+++|+.|+|++|++++..+ ..+..+++|++|++++|+++ .+|..+. ..++.|++++|.++.
T Consensus 346 l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~ 424 (549)
T 2z81_A 346 MVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRV 424 (549)
T ss_dssp CCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSC
T ss_pred cccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCccc
Confidence 9987743 47889999999999999996543 56899999999999999999 6777653 478999999999874
No 22
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.96 E-value=4.2e-29 Score=291.01 Aligned_cols=273 Identities=19% Similarity=0.168 Sum_probs=199.4
Q ss_pred ccEEEEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEEEe
Q 003737 92 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLSI 170 (799)
Q Consensus 92 ~~v~~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L 170 (799)
.+++.|+|++|.+++..|..|..+++|++|+|++|++++..|..|..++ |++|+|++|+++ .+|.. .+++|++|+|
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 128 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDL 128 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEEC
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEEC
Confidence 5789999999999988888999999999999999999998899999887 999999999998 56665 7999999999
Q ss_pred eCCcCCC-CCCccccCCCCCCEEEcccCcCCccCChhccCCCCC--CEEEccCCcC--CCcCCccccCCC----------
Q 003737 171 EGNLFTG-SIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNL--NDLRISDNNF--SGKIPEFIGKWK---------- 235 (799)
Q Consensus 171 s~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L--~~L~Ls~N~l--~~~~p~~~~~l~---------- 235 (799)
++|++++ .+|..|+++++|++|++++|++++. .+..+++| ++|++++|.+ ++..|..+..+.
T Consensus 129 s~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~ 205 (562)
T 3a79_B 129 SFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHP 205 (562)
T ss_dssp CSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECS
T ss_pred CCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccccccCcccccccCcceEEEEecC
Confidence 9999986 4568899999999999999998853 34555555 9999999988 777676665543
Q ss_pred -----------------------------------------------------------------------CCCEEEccC
Q 003737 236 -----------------------------------------------------------------------KIQKLHIQG 244 (799)
Q Consensus 236 -----------------------------------------------------------------------~L~~L~L~~ 244 (799)
+|++|++++
T Consensus 206 n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~ 285 (562)
T 3a79_B 206 NSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYN 285 (562)
T ss_dssp SSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEE
T ss_pred ccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEec
Confidence 667777777
Q ss_pred CCCCCCCchhh-----hcC--------------------------CCCCeEEcCCCCCCCCCCCccCC-CCccEEEccCC
Q 003737 245 SSLEGPIPASI-----SAL--------------------------TSLTDLRISDLKGSESAFPKLDK-MNLKTLILTKC 292 (799)
Q Consensus 245 N~l~~~~p~~~-----~~l--------------------------~~L~~L~L~~n~~~~~~~~~l~~-~~L~~L~L~~N 292 (799)
|.++|.+|..+ .++ .+|+.|++++|......++ .. .+|++|++++|
T Consensus 286 n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~~--~~l~~L~~L~l~~n 363 (562)
T 3a79_B 286 LTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCP--PSPSSFTFLNFTQN 363 (562)
T ss_dssp EEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCCCC--SSCCCCCEEECCSS
T ss_pred cEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCcccccCc--cCCCCceEEECCCC
Confidence 77777777655 222 2244444444332221111 22 56777777777
Q ss_pred cCcccCCccccCCCCCCeeccccccCCC--CCchhhhccCCCCEEeccCCcCCCcCChhhh---cCCCEEEeecCcCccc
Q 003737 293 LIHGEIPDYIGDMTKLKNIDLSFNNLTG--GIPTTFEKLAKTNFMYLTGNKLTGPVPKYIF---NSNKNVDISLNNFTWE 367 (799)
Q Consensus 293 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~---~~l~~l~ls~N~~~g~ 367 (799)
.+++.+|..+..+++|+.|+|++|++++ .+|..|..+++|+.|++++|++++.+|...+ ..++.|++++|.+++.
T Consensus 364 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~ 443 (562)
T 3a79_B 364 VFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGS 443 (562)
T ss_dssp CCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGG
T ss_pred ccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcc
Confidence 7777777777777777777777777775 2345567777777777777777765665433 3566777777777766
Q ss_pred CCCCC
Q 003737 368 SSDPI 372 (799)
Q Consensus 368 ~p~~~ 372 (799)
+|..+
T Consensus 444 ~~~~l 448 (562)
T 3a79_B 444 VFRCL 448 (562)
T ss_dssp GGSSC
T ss_pred hhhhh
Confidence 65543
No 23
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.96 E-value=3.8e-29 Score=301.08 Aligned_cols=271 Identities=21% Similarity=0.283 Sum_probs=202.0
Q ss_pred ccEEEEEeCCCCCcccCCccccCCCCCCEEEccCCc-CCC-cCccccccc--------ceeEEEccCCcCcCcCCc--cc
Q 003737 92 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNC-LTG-SFSPQWASL--------QLVELSVMGNRLSGPFPK--VL 159 (799)
Q Consensus 92 ~~v~~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~-l~~-~~p~~~~~l--------~L~~L~Ls~N~l~~~~p~--~~ 159 (799)
.+++.|+|++|++.|.+|..|.++++|++|+|++|+ +++ .+|..++.+ +|++|+|++|+++ .+|. .|
T Consensus 491 ~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l 569 (876)
T 4ecn_A 491 KDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASL 569 (876)
T ss_dssp TTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHH
T ss_pred CCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhh
Confidence 579999999999999999999999999999999998 998 788776654 4999999999999 8888 99
Q ss_pred CCCCCCCEEEeeCCcCCCCCCccccCCCCCCEEEcccCcCCccCChhccCCCC-CCEEEccCCcCCCcCCccccCCCC--
Q 003737 160 TNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTN-LNDLRISDNNFSGKIPEFIGKWKK-- 236 (799)
Q Consensus 160 ~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~p~~~~~l~~-- 236 (799)
+++++|++|+|++|.++ .+| .|+.+++|++|+|++|+++ .+|..+.++++ |++|+|++|.++ .+|..+..++.
T Consensus 570 ~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~ 645 (876)
T 4ecn_A 570 QKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYV 645 (876)
T ss_dssp TTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSC
T ss_pred hcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCC
Confidence 99999999999999998 888 8999999999999999999 89999999998 999999999998 77888777654
Q ss_pred CCEEEccCCCCCCCCchhh---h--cCCCCCeEEcCCCCCCCCCCCc--cCC-CCccEEEccCCcCcccCCccccC----
Q 003737 237 IQKLHIQGSSLEGPIPASI---S--ALTSLTDLRISDLKGSESAFPK--LDK-MNLKTLILTKCLIHGEIPDYIGD---- 304 (799)
Q Consensus 237 L~~L~L~~N~l~~~~p~~~---~--~l~~L~~L~L~~n~~~~~~~~~--l~~-~~L~~L~L~~N~l~~~~p~~l~~---- 304 (799)
|+.|+|++|++++.+|... . .+++|+.|++++|.+. .+|. +.. ++|+.|+|++|+++ .+|..+..
T Consensus 646 L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~--~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~ 722 (876)
T 4ecn_A 646 MGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ--KFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDG 722 (876)
T ss_dssp EEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC--SCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTS
T ss_pred CCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCC--ccCHHHHccCCCCCEEECCCCcCC-ccChHHhccccc
Confidence 8888888888877554322 2 2336666666665444 2332 222 55666666666666 44443322
Q ss_pred ----CCCCCeeccccccCCCCCchhhh--ccCCCCEEeccCCcCCCcCChhhh--cCCCEEEeec------CcCcccCCC
Q 003737 305 ----MTKLKNIDLSFNNLTGGIPTTFE--KLAKTNFMYLTGNKLTGPVPKYIF--NSNKNVDISL------NNFTWESSD 370 (799)
Q Consensus 305 ----l~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~L~~N~l~g~~p~~~~--~~l~~l~ls~------N~~~g~~p~ 370 (799)
+++|+.|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|..+. ..++.|+|++ |++.+.+|.
T Consensus 723 ~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~ 800 (876)
T 4ecn_A 723 NYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPT 800 (876)
T ss_dssp CCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCT
T ss_pred cccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChH
Confidence 226666666666666 5555554 66666666666666665 555443 2456666654 555666665
Q ss_pred CC
Q 003737 371 PI 372 (799)
Q Consensus 371 ~~ 372 (799)
.+
T Consensus 801 ~l 802 (876)
T 4ecn_A 801 GI 802 (876)
T ss_dssp TG
T ss_pred HH
Confidence 54
No 24
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.96 E-value=7.6e-29 Score=291.47 Aligned_cols=279 Identities=18% Similarity=0.153 Sum_probs=203.6
Q ss_pred ccEEEEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEEEe
Q 003737 92 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLSI 170 (799)
Q Consensus 92 ~~v~~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L 170 (799)
.++++|+|++|.+++..|..|.++++|++|+|++|.+++..|..|+.++ |++|+|++|.+++..|..++++++|++|+|
T Consensus 56 ~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 135 (606)
T 3vq2_A 56 SELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNV 135 (606)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEEC
T ss_pred ccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeC
Confidence 5788999999999988888899999999999999999988888888887 999999999998877788999999999999
Q ss_pred eCCcCCC-CCCccccCCCCCCEEEcccCcCCccCChhccCC---------------------------------------
Q 003737 171 EGNLFTG-SIPPDIRKLINLQKLILSSNSFTGELPAELTKL--------------------------------------- 210 (799)
Q Consensus 171 s~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l--------------------------------------- 210 (799)
++|.+++ .+|..|+++++|++|++++|++++..|..+..+
T Consensus 136 ~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~n~ 215 (606)
T 3vq2_A 136 AHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGIKLHELTLRGNF 215 (606)
T ss_dssp CSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCC
T ss_pred CCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCCcceeCcccccCceeeeeeccCCc
Confidence 9999875 568889999999999999888876554433221
Q ss_pred --------------------------------------------------------------------------------
Q 003737 211 -------------------------------------------------------------------------------- 210 (799)
Q Consensus 211 -------------------------------------------------------------------------------- 210 (799)
T Consensus 216 ~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~l~~L~~L~l~~~ 295 (606)
T 3vq2_A 216 NSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGV 295 (606)
T ss_dssp SCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGSCGGGTTCSEEEEESC
T ss_pred cchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccccccccccccccCCCCCEEEecCc
Confidence
Q ss_pred -----------CCCCEEEccCCcCCCcCCc--------------------cccCCCCCCEEEccCCCCCCC--Cchhhhc
Q 003737 211 -----------TNLNDLRISDNNFSGKIPE--------------------FIGKWKKIQKLHIQGSSLEGP--IPASISA 257 (799)
Q Consensus 211 -----------~~L~~L~Ls~N~l~~~~p~--------------------~~~~l~~L~~L~L~~N~l~~~--~p~~~~~ 257 (799)
++|++|++++|.+ +.+|. .+..+++|++|++++|.+++. +|..+..
T Consensus 296 ~~~~l~~l~~~~~L~~L~l~~n~l-~~lp~~~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~ 374 (606)
T 3vq2_A 296 SIKYLEDVPKHFKWQSLSIIRCQL-KQFPTLDLPFLKSLTLTMNKGSISFKKVALPSLSYLDLSRNALSFSGCCSYSDLG 374 (606)
T ss_dssp CCCCCCCCCTTCCCSEEEEESCCC-SSCCCCCCSSCCEEEEESCSSCEECCCCCCTTCCEEECCSSCEEEEEECCHHHHC
T ss_pred cchhhhhccccccCCEEEcccccC-cccccCCCCccceeeccCCcCccchhhccCCCCCEEECcCCccCCCcchhhhhcc
Confidence 2333333333333 22221 234566777888888888765 3788888
Q ss_pred CCCCCeEEcCCCCCCCCCCCccCC-CCccEEEccCCcCcccCC-ccccCCCCCCeeccccccCCCCCchhhhccCCCCEE
Q 003737 258 LTSLTDLRISDLKGSESAFPKLDK-MNLKTLILTKCLIHGEIP-DYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFM 335 (799)
Q Consensus 258 l~~L~~L~L~~n~~~~~~~~~l~~-~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 335 (799)
+++|++|++++|...... ..+.. .+|+.|++++|.+++..| ..+..+++|++|++++|++++..|..+..+++|+.|
T Consensus 375 ~~~L~~L~L~~n~l~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 453 (606)
T 3vq2_A 375 TNSLRHLDLSFNGAIIMS-ANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTL 453 (606)
T ss_dssp CSCCCEEECCSCSEEEEC-CCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEE
T ss_pred CCcccEeECCCCccccch-hhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEE
Confidence 888888888886543322 33444 677777777777776666 566777777777777777777777777777777777
Q ss_pred eccCCcCCCc-CChhhh--cCCCEEEeecCcCcccCCCCC
Q 003737 336 YLTGNKLTGP-VPKYIF--NSNKNVDISLNNFTWESSDPI 372 (799)
Q Consensus 336 ~L~~N~l~g~-~p~~~~--~~l~~l~ls~N~~~g~~p~~~ 372 (799)
++++|++++. +|..+. ..++.|++++|.+++.+|..+
T Consensus 454 ~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~ 493 (606)
T 3vq2_A 454 KMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVF 493 (606)
T ss_dssp ECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTT
T ss_pred ECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhh
Confidence 7777777763 454442 456777777777776666554
No 25
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.96 E-value=2.7e-28 Score=264.49 Aligned_cols=264 Identities=20% Similarity=0.284 Sum_probs=213.9
Q ss_pred ccEEEEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEEEe
Q 003737 92 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLSI 170 (799)
Q Consensus 92 ~~v~~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L 170 (799)
++++.++++++.++ .+|..+. +.|++|+|++|++++..+..|..++ |++|+|++|++++..|..|.++++|++|+|
T Consensus 31 c~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (330)
T 1xku_A 31 CHLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYL 107 (330)
T ss_dssp EETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred CCCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEEC
Confidence 45677888888887 5676554 6899999999999988888888887 999999999999888999999999999999
Q ss_pred eCCcCCCCCCccccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccCCcCCC--cCCccccCCCCCCEEEccCCCCC
Q 003737 171 EGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSG--KIPEFIGKWKKIQKLHIQGSSLE 248 (799)
Q Consensus 171 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~ 248 (799)
++|.++ .+|..+. ++|++|++++|.+++..+..|.++++|++|++++|.+.. ..+..+..+++|++|++++|.++
T Consensus 108 s~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~ 184 (330)
T 1xku_A 108 SKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT 184 (330)
T ss_dssp CSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC
T ss_pred CCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc
Confidence 999988 5676654 789999999999997777789999999999999999863 67788899999999999999988
Q ss_pred CCCchhhhcCCCCCeEEcCCCCCCCCCCCccCC-CCccEEEccCCcCcccCCccccCCCCCCeeccccccCCCCCchhhh
Q 003737 249 GPIPASISALTSLTDLRISDLKGSESAFPKLDK-MNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFE 327 (799)
Q Consensus 249 ~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~l~~-~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~ 327 (799)
. +|..+. ++|++|++++|.........+.. .+|+.|+|++|.+++..+..+..+++|++|+|++|+++ .+|..+.
T Consensus 185 ~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~ 260 (330)
T 1xku_A 185 T-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLA 260 (330)
T ss_dssp S-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTT
T ss_pred c-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhc
Confidence 5 454443 78888888886654433334555 78888888888888877778888888888888888888 7788888
Q ss_pred ccCCCCEEeccCCcCCCcCChhhh--------cCCCEEEeecCcCc
Q 003737 328 KLAKTNFMYLTGNKLTGPVPKYIF--------NSNKNVDISLNNFT 365 (799)
Q Consensus 328 ~l~~L~~L~L~~N~l~g~~p~~~~--------~~l~~l~ls~N~~~ 365 (799)
.+++|++|++++|++++..+..+. ..++.+++++|.+.
T Consensus 261 ~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~ 306 (330)
T 1xku_A 261 DHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQ 306 (330)
T ss_dssp TCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSC
T ss_pred cCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCccc
Confidence 888888888888888854443331 34567888888775
No 26
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=2.4e-29 Score=275.46 Aligned_cols=261 Identities=18% Similarity=0.220 Sum_probs=149.5
Q ss_pred CCCCcccCCccccCCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEEEeeCCcCCCCC
Q 003737 101 AQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSI 179 (799)
Q Consensus 101 ~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~ 179 (799)
+++++ .+|..+. ++|++|+|++|++++..+..+..++ |++|++++|++++..|..|.++++|++|+|++|++++..
T Consensus 40 ~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 116 (353)
T 2z80_A 40 SGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLS 116 (353)
T ss_dssp STTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCC
T ss_pred CCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCC
Confidence 34444 3444333 3566666666666655555555555 666666666666555556666666666666666665433
Q ss_pred CccccCCCCCCEEEcccCcCCccCC-hhccCCCCCCEEEccCC-cCCCcCCccccCCCCCCEEEccCCCCCCCCchhhhc
Q 003737 180 PPDIRKLINLQKLILSSNSFTGELP-AELTKLTNLNDLRISDN-NFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISA 257 (799)
Q Consensus 180 p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 257 (799)
+..|.++++|++|++++|++++..+ ..+.++++|++|++++| .+....+..|..+++|++|++++|.+++..|..+..
T Consensus 117 ~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~ 196 (353)
T 2z80_A 117 SSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKS 196 (353)
T ss_dssp HHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTT
T ss_pred HhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhc
Confidence 3335666666666666666653222 24556666666666666 344444555666666666666666666655666666
Q ss_pred CCCCCeEEcCCCCCCCCCCCc--cCC-CCccEEEccCCcCcccCCcccc---CCCCCCeeccccccCCC----CCchhhh
Q 003737 258 LTSLTDLRISDLKGSESAFPK--LDK-MNLKTLILTKCLIHGEIPDYIG---DMTKLKNIDLSFNNLTG----GIPTTFE 327 (799)
Q Consensus 258 l~~L~~L~L~~n~~~~~~~~~--l~~-~~L~~L~L~~N~l~~~~p~~l~---~l~~L~~L~Ls~N~l~~----~~p~~~~ 327 (799)
+++|++|++++|... .+|. +.. .+|+.|++++|.+++..+..+. ..+.++.++|++|.+++ .+|..+.
T Consensus 197 l~~L~~L~l~~n~l~--~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~ 274 (353)
T 2z80_A 197 IQNVSHLILHMKQHI--LLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLN 274 (353)
T ss_dssp CSEEEEEEEECSCST--THHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHH
T ss_pred cccCCeecCCCCccc--cchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHh
Confidence 666666666654432 1221 221 4566666666666654443322 34556666666666664 3566667
Q ss_pred ccCCCCEEeccCCcCCCcCChhhh---cCCCEEEeecCcCccc
Q 003737 328 KLAKTNFMYLTGNKLTGPVPKYIF---NSNKNVDISLNNFTWE 367 (799)
Q Consensus 328 ~l~~L~~L~L~~N~l~g~~p~~~~---~~l~~l~ls~N~~~g~ 367 (799)
.+++|+.|++++|+++ .+|..++ ..++.|++++|.+++.
T Consensus 275 ~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~~N~~~~~ 316 (353)
T 2z80_A 275 QISGLLELEFSRNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCS 316 (353)
T ss_dssp TCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred cccCCCEEECCCCCCC-ccCHHHHhcCCCCCEEEeeCCCccCc
Confidence 7777777777777777 5555542 3456777777766543
No 27
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.96 E-value=3.3e-28 Score=280.65 Aligned_cols=270 Identities=18% Similarity=0.202 Sum_probs=187.5
Q ss_pred cccEEEEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCcCcC-cCCcccCCCCCCCEE
Q 003737 91 TCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNRLSG-PFPKVLTNITTLKNL 168 (799)
Q Consensus 91 ~~~v~~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~-~~p~~~~~L~~L~~L 168 (799)
..++++|+|++|.+++..|..|..+++|++|||++|+++. +|.. .++ |++|+|++|++++ .+|..|+++++|++|
T Consensus 44 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L 120 (520)
T 2z7x_B 44 LSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLVK-ISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFL 120 (520)
T ss_dssp CTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCCE-EECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEE
T ss_pred cccccEEecCCCccCCcChHHhhcccCCCEEecCCCceee-cCcc--ccCCccEEeccCCccccccchhhhccCCcceEE
Confidence 3579999999999999889999999999999999999995 4544 555 9999999999997 578999999999999
Q ss_pred EeeCCcCCCCCCccccCCCCC--CEEEcccCcC--CccCChhccCCC---------------------------------
Q 003737 169 SIEGNLFTGSIPPDIRKLINL--QKLILSSNSF--TGELPAELTKLT--------------------------------- 211 (799)
Q Consensus 169 ~Ls~N~l~~~~p~~~~~l~~L--~~L~Ls~N~l--~~~~p~~~~~l~--------------------------------- 211 (799)
++++|.+++ ..+..+++| ++|++++|.+ .+..|..+..++
T Consensus 121 ~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l 197 (520)
T 2z7x_B 121 GLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNI 197 (520)
T ss_dssp EEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCE
T ss_pred EecCcccch---hhccccccceeeEEEeecccccccccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccc
Confidence 999998864 234444444 5555555555 334444333322
Q ss_pred --------------------------------------------------CCCEEEccCCcCCCcCCccc----------
Q 003737 212 --------------------------------------------------NLNDLRISDNNFSGKIPEFI---------- 231 (799)
Q Consensus 212 --------------------------------------------------~L~~L~Ls~N~l~~~~p~~~---------- 231 (799)
+|++|++++|+++|.+|..+
T Consensus 198 ~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~ 277 (520)
T 2z7x_B 198 KCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKA 277 (520)
T ss_dssp EECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCE
T ss_pred cccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCce
Confidence 44445555555444444333
Q ss_pred -------------------------------------------cCCCCCCEEEccCCCCCCCCchhhhcCCCCCeEEcCC
Q 003737 232 -------------------------------------------GKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISD 268 (799)
Q Consensus 232 -------------------------------------------~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 268 (799)
..+++|++|++++|++++.+|..+..+++|++|++++
T Consensus 278 L~~l~l~~n~~~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 357 (520)
T 2z7x_B 278 LSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQM 357 (520)
T ss_dssp EEEEEEEECCCCSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCS
T ss_pred eEeccccccceecchhhhhcccccCceeEEEcCCCccccccchhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccC
Confidence 4566777777777777777777777777777777777
Q ss_pred CCCCCC-CCCc-cCC-CCccEEEccCCcCcccCCcc-ccCCCCCCeeccccccCCCCCchhhhccCCCCEEeccCCcCCC
Q 003737 269 LKGSES-AFPK-LDK-MNLKTLILTKCLIHGEIPDY-IGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTG 344 (799)
Q Consensus 269 n~~~~~-~~~~-l~~-~~L~~L~L~~N~l~~~~p~~-l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g 344 (799)
|.+... .+|. +.. ++|++|++++|.+++.+|.. +..+++|+.|++++|++++.+|..+. ++|+.|++++|+++
T Consensus 358 N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~- 434 (520)
T 2z7x_B 358 NQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK- 434 (520)
T ss_dssp SCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-
T ss_pred CccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-
Confidence 555431 2222 444 67777777777777645543 66677777777777777766665543 57777777777777
Q ss_pred cCChhhh--cCCCEEEeecCcCcccCCC
Q 003737 345 PVPKYIF--NSNKNVDISLNNFTWESSD 370 (799)
Q Consensus 345 ~~p~~~~--~~l~~l~ls~N~~~g~~p~ 370 (799)
.+|..++ ..++.|++++|+++ .+|.
T Consensus 435 ~ip~~~~~l~~L~~L~L~~N~l~-~l~~ 461 (520)
T 2z7x_B 435 SIPKQVVKLEALQELNVASNQLK-SVPD 461 (520)
T ss_dssp CCCGGGGGCTTCCEEECCSSCCC-CCCT
T ss_pred ccchhhhcCCCCCEEECCCCcCC-ccCH
Confidence 6666554 35677777777777 3444
No 28
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.96 E-value=4e-28 Score=289.27 Aligned_cols=282 Identities=19% Similarity=0.207 Sum_probs=233.3
Q ss_pred cccEEEEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEEE
Q 003737 91 TCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLS 169 (799)
Q Consensus 91 ~~~v~~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~ 169 (799)
+.+++.|+|++|.+++..+..|.++++|++|+|++|.+++..|..|..++ |++|+|++|++++..+..|+++++|++|+
T Consensus 24 ~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 103 (680)
T 1ziw_A 24 PTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELH 103 (680)
T ss_dssp CTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEE
T ss_pred CCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEE
Confidence 35899999999999988888899999999999999999999999999988 99999999999977777899999999999
Q ss_pred eeCCcCCCCCCccccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccCCcCCCcCCcccc--CCCCCCEEEccCCCC
Q 003737 170 IEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIG--KWKKIQKLHIQGSSL 247 (799)
Q Consensus 170 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~L~~N~l 247 (799)
|++|.+++..|..|+++++|++|++++|.+++..|..+.++++|++|++++|.+++..+..+. .+++|++|++++|.+
T Consensus 104 L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l 183 (680)
T 1ziw_A 104 LMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQI 183 (680)
T ss_dssp CCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCC
T ss_pred CCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcc
Confidence 999999987778999999999999999999998899999999999999999999988777665 568999999999999
Q ss_pred CCCCchhhhcCCC---------------------------CCeEEcCCCCCCCCCCCccCC---CCccEEEccCCcCccc
Q 003737 248 EGPIPASISALTS---------------------------LTDLRISDLKGSESAFPKLDK---MNLKTLILTKCLIHGE 297 (799)
Q Consensus 248 ~~~~p~~~~~l~~---------------------------L~~L~L~~n~~~~~~~~~l~~---~~L~~L~L~~N~l~~~ 297 (799)
++..|..+..+.+ |+.|++++|.........+.. .+|+.|+|++|.+++.
T Consensus 184 ~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~ 263 (680)
T 1ziw_A 184 KEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVV 263 (680)
T ss_dssp CCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEE
T ss_pred cccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCcc
Confidence 9988888876654 455555554332222122322 4588888888888888
Q ss_pred CCccccCCCCCCeeccccccCCCCCchhhhccCCCCEEeccCCcCCCc-----CCh----hh--hcCCCEEEeecCcCcc
Q 003737 298 IPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGP-----VPK----YI--FNSNKNVDISLNNFTW 366 (799)
Q Consensus 298 ~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~-----~p~----~~--~~~l~~l~ls~N~~~g 366 (799)
.|..+..+++|++|++++|++++..|..|..+++|+.|++++|...+. +|. .+ ...++.|++++|.+++
T Consensus 264 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~ 343 (680)
T 1ziw_A 264 GNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPG 343 (680)
T ss_dssp CTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCC
T ss_pred CcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCC
Confidence 888888888888888888888888888888888888888887766542 232 12 2467888888888888
Q ss_pred cCCCCC
Q 003737 367 ESSDPI 372 (799)
Q Consensus 367 ~~p~~~ 372 (799)
..|..+
T Consensus 344 ~~~~~~ 349 (680)
T 1ziw_A 344 IKSNMF 349 (680)
T ss_dssp CCTTTT
T ss_pred CChhHh
Confidence 766554
No 29
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.96 E-value=2.8e-28 Score=264.60 Aligned_cols=263 Identities=22% Similarity=0.321 Sum_probs=217.0
Q ss_pred ccEEEEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEEEe
Q 003737 92 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLSI 170 (799)
Q Consensus 92 ~~v~~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L 170 (799)
++++.+++++++++ .+|..+. ++|++|+|++|.+++..|..|..++ |++|++++|++++..|..|+++++|++|+|
T Consensus 33 c~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 109 (332)
T 2ft3_A 33 CHLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYI 109 (332)
T ss_dssp EETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEEC
T ss_pred ccCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEEC
Confidence 45678899999988 6777664 7899999999999988888898887 999999999999888999999999999999
Q ss_pred eCCcCCCCCCccccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccCCcCC--CcCCccccCCCCCCEEEccCCCCC
Q 003737 171 EGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFS--GKIPEFIGKWKKIQKLHIQGSSLE 248 (799)
Q Consensus 171 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~L~~N~l~ 248 (799)
++|.++ .+|..+. ++|++|++++|++++..+..|.++++|++|++++|.++ +..|..+..+ +|++|++++|+++
T Consensus 110 ~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~ 185 (332)
T 2ft3_A 110 SKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLT 185 (332)
T ss_dssp CSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCS
T ss_pred CCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCC
Confidence 999998 6676655 79999999999999776777999999999999999996 4678888888 9999999999998
Q ss_pred CCCchhhhcCCCCCeEEcCCCCCCCCCCCccCC-CCccEEEccCCcCcccCCccccCCCCCCeeccccccCCCCCchhhh
Q 003737 249 GPIPASISALTSLTDLRISDLKGSESAFPKLDK-MNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFE 327 (799)
Q Consensus 249 ~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~l~~-~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~ 327 (799)
+ +|..+. ++|++|++++|.........+.. .+|+.|+|++|.+++..+..+..+++|++|+|++|+++ .+|..+.
T Consensus 186 ~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~ 261 (332)
T 2ft3_A 186 G-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLP 261 (332)
T ss_dssp S-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGG
T ss_pred c-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhh
Confidence 6 555443 68888899886665544344555 78888999999988877778888889999999999888 7788888
Q ss_pred ccCCCCEEeccCCcCCCcCChhhh--------cCCCEEEeecCcCc
Q 003737 328 KLAKTNFMYLTGNKLTGPVPKYIF--------NSNKNVDISLNNFT 365 (799)
Q Consensus 328 ~l~~L~~L~L~~N~l~g~~p~~~~--------~~l~~l~ls~N~~~ 365 (799)
.+++|+.|++++|++++..+..+. ..++.+++++|.+.
T Consensus 262 ~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~ 307 (332)
T 2ft3_A 262 DLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVP 307 (332)
T ss_dssp GCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSC
T ss_pred cCccCCEEECCCCCCCccChhHccccccccccccccceEeecCccc
Confidence 889999999999988854444332 23568888888876
No 30
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.96 E-value=5.5e-28 Score=281.76 Aligned_cols=138 Identities=22% Similarity=0.231 Sum_probs=104.8
Q ss_pred ccEEEEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEEEe
Q 003737 92 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLSI 170 (799)
Q Consensus 92 ~~v~~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L 170 (799)
.+++.|+|++|++++..+..|.++++|++|+|++|++++..+..|..++ |++|+|++|++++..|..|+++++|++|++
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccc
Confidence 4677888888888877777788888888888888888877777777776 888888888887777777888888888888
Q ss_pred eCCcCCCCCCccccCCCCCCEEEcccCcCCc-cCChhccCCCCCCEEEccCCcCCCcCCc
Q 003737 171 EGNLFTGSIPPDIRKLINLQKLILSSNSFTG-ELPAELTKLTNLNDLRISDNNFSGKIPE 229 (799)
Q Consensus 171 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 229 (799)
++|.+++..+..|+++++|++|++++|.+++ .+|..|.++++|++|++++|++++..|.
T Consensus 108 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~ 167 (570)
T 2z63_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT 167 (570)
T ss_dssp TTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGG
T ss_pred cccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHH
Confidence 8887775555467777788888888777775 4677777777777777777766544333
No 31
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.96 E-value=6e-28 Score=261.73 Aligned_cols=266 Identities=20% Similarity=0.237 Sum_probs=227.1
Q ss_pred cccEEEEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEEE
Q 003737 91 TCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLS 169 (799)
Q Consensus 91 ~~~v~~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~ 169 (799)
..+++.|+|++|++++..+..|.++++|++|+|++|.+++..|..|..++ |++|++++|+++ .+|..+. ++|++|+
T Consensus 51 ~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~ 127 (330)
T 1xku_A 51 PPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELR 127 (330)
T ss_dssp CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEE
T ss_pred CCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEE
Confidence 35789999999999988888999999999999999999999999999987 999999999998 5666554 7999999
Q ss_pred eeCCcCCCCCCccccCCCCCCEEEcccCcCCc--cCChhccCCCCCCEEEccCCcCCCcCCccccCCCCCCEEEccCCCC
Q 003737 170 IEGNLFTGSIPPDIRKLINLQKLILSSNSFTG--ELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSL 247 (799)
Q Consensus 170 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 247 (799)
+++|.+++..+..|.++++|++|++++|.++. ..+..+.++++|++|++++|+++. +|..+. ++|++|++++|.+
T Consensus 128 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l 204 (330)
T 1xku_A 128 VHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT-IPQGLP--PSLTELHLDGNKI 204 (330)
T ss_dssp CCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-CCSSCC--TTCSEEECTTSCC
T ss_pred CCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc-CCcccc--ccCCEEECCCCcC
Confidence 99999997777789999999999999999963 678889999999999999999984 566554 8999999999999
Q ss_pred CCCCchhhhcCCCCCeEEcCCCCCCCCCCCccCC-CCccEEEccCCcCcccCCccccCCCCCCeeccccccCCCCCchhh
Q 003737 248 EGPIPASISALTSLTDLRISDLKGSESAFPKLDK-MNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTF 326 (799)
Q Consensus 248 ~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~l~~-~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~ 326 (799)
++..|..+..+++|+.|++++|.........+.. ++|+.|+|++|.++ .+|..+..+++|++|++++|++++..+..|
T Consensus 205 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f 283 (330)
T 1xku_A 205 TKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDF 283 (330)
T ss_dssp CEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSS
T ss_pred CccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhc
Confidence 9988999999999999999997665433334555 79999999999999 788899999999999999999998777777
Q ss_pred hc------cCCCCEEeccCCcCCC-cCChhhh---cCCCEEEeecCc
Q 003737 327 EK------LAKTNFMYLTGNKLTG-PVPKYIF---NSNKNVDISLNN 363 (799)
Q Consensus 327 ~~------l~~L~~L~L~~N~l~g-~~p~~~~---~~l~~l~ls~N~ 363 (799)
.. .+.|+.|++++|.+.. .+++..+ ..++.++|++|+
T Consensus 284 ~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 284 CPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp SCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred CCcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 54 3789999999999973 3443333 346789999885
No 32
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.96 E-value=5.5e-28 Score=281.53 Aligned_cols=269 Identities=21% Similarity=0.175 Sum_probs=216.1
Q ss_pred EEEEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEEEeeC
Q 003737 94 VVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLSIEG 172 (799)
Q Consensus 94 v~~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~ 172 (799)
.+.++++++++++ +|..+. ++|++|+|++|.+++..|..|..++ |++|+|++|++++..|+.|.++++|++|+|++
T Consensus 33 ~~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 109 (562)
T 3a79_B 33 ESMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSH 109 (562)
T ss_dssp CCEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTT
T ss_pred CcEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCC
Confidence 3789999999995 787665 8999999999999999999999998 99999999999999999999999999999999
Q ss_pred CcCCCCCCccccCCCCCCEEEcccCcCCc-cCChhccCCCCCCEEEccCCcCCCcCCccccCCCCC--CEEEccCCCC--
Q 003737 173 NLFTGSIPPDIRKLINLQKLILSSNSFTG-ELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKI--QKLHIQGSSL-- 247 (799)
Q Consensus 173 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L--~~L~L~~N~l-- 247 (799)
|+++ .+|.. .+++|++|+|++|++++ .+|..|.++++|++|++++|++++. .+..+++| ++|++++|.+
T Consensus 110 N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~ 183 (562)
T 3a79_B 110 NRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHI 183 (562)
T ss_dssp SCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCC
T ss_pred CcCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccc
Confidence 9998 67766 89999999999999997 4578999999999999999999863 45555556 9999999999
Q ss_pred CCCCchhhhcCC--------------------------CCCeEEcCCCCCC----------------------------C
Q 003737 248 EGPIPASISALT--------------------------SLTDLRISDLKGS----------------------------E 273 (799)
Q Consensus 248 ~~~~p~~~~~l~--------------------------~L~~L~L~~n~~~----------------------------~ 273 (799)
++..|..+..+. +|+.|++++|... .
T Consensus 184 ~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~ 263 (562)
T 3a79_B 184 KGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTW 263 (562)
T ss_dssp CSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECH
T ss_pred cccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcH
Confidence 777777766543 4444444443100 0
Q ss_pred C----CCCccCCCCccEEEccCCcCcccCCccc-----------------------------------------------
Q 003737 274 S----AFPKLDKMNLKTLILTKCLIHGEIPDYI----------------------------------------------- 302 (799)
Q Consensus 274 ~----~~~~l~~~~L~~L~L~~N~l~~~~p~~l----------------------------------------------- 302 (799)
. ..+.+...+|++|++++|.++|.+|..+
T Consensus 264 ~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~ 343 (562)
T 3a79_B 264 KCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPF 343 (562)
T ss_dssp HHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCC
T ss_pred HHHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCc
Confidence 0 0000011256666666666665555543
Q ss_pred ------cCCCCCCeeccccccCCCCCchhhhccCCCCEEeccCCcCCCc--CChhh--hcCCCEEEeecCcCcccCCCC
Q 003737 303 ------GDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGP--VPKYI--FNSNKNVDISLNNFTWESSDP 371 (799)
Q Consensus 303 ------~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~--~p~~~--~~~l~~l~ls~N~~~g~~p~~ 371 (799)
..+++|++|++++|++++.+|..+..+++|+.|++++|++++. +|..+ ...++.|++++|.+++.+|..
T Consensus 344 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 422 (562)
T 3a79_B 344 IHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDR 422 (562)
T ss_dssp CCCCCCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSC
T ss_pred ccccCccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChh
Confidence 6789999999999999999999999999999999999999962 23333 357899999999999977765
No 33
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.96 E-value=7.3e-28 Score=261.31 Aligned_cols=264 Identities=20% Similarity=0.235 Sum_probs=226.4
Q ss_pred ccEEEEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEEEe
Q 003737 92 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLSI 170 (799)
Q Consensus 92 ~~v~~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L 170 (799)
.+++.|++++|.+++..|..|.++++|++|+|++|.+++..|..|..++ |++|++++|+++ .+|..+. ++|++|++
T Consensus 54 ~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l 130 (332)
T 2ft3_A 54 PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRI 130 (332)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEEC
T ss_pred CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEEC
Confidence 5799999999999988888999999999999999999999999999987 999999999998 5666555 89999999
Q ss_pred eCCcCCCCCCccccCCCCCCEEEcccCcCC--ccCChhccCCCCCCEEEccCCcCCCcCCccccCCCCCCEEEccCCCCC
Q 003737 171 EGNLFTGSIPPDIRKLINLQKLILSSNSFT--GELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLE 248 (799)
Q Consensus 171 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 248 (799)
++|.+++..+..|.++++|++|++++|.++ +..|..+..+ +|++|++++|++++ +|..+. ++|++|++++|.++
T Consensus 131 ~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~ 206 (332)
T 2ft3_A 131 HDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQ 206 (332)
T ss_dssp CSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCC
T ss_pred CCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcCC
Confidence 999999776677999999999999999996 4678888888 99999999999985 666554 79999999999999
Q ss_pred CCCchhhhcCCCCCeEEcCCCCCCCCCCCccCC-CCccEEEccCCcCcccCCccccCCCCCCeeccccccCCCCCchhhh
Q 003737 249 GPIPASISALTSLTDLRISDLKGSESAFPKLDK-MNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFE 327 (799)
Q Consensus 249 ~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~l~~-~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~ 327 (799)
+..+..+..+++|+.|++++|.........+.. ++|+.|+|++|+++ .+|..+..+++|+.|++++|++++..+..|.
T Consensus 207 ~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~ 285 (332)
T 2ft3_A 207 AIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFC 285 (332)
T ss_dssp CCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSS
T ss_pred ccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHcc
Confidence 988899999999999999997665543334655 89999999999999 7888899999999999999999988777776
Q ss_pred c------cCCCCEEeccCCcCC--CcCChhhh--cCCCEEEeecCc
Q 003737 328 K------LAKTNFMYLTGNKLT--GPVPKYIF--NSNKNVDISLNN 363 (799)
Q Consensus 328 ~------l~~L~~L~L~~N~l~--g~~p~~~~--~~l~~l~ls~N~ 363 (799)
. .+.|+.|++++|++. +..|..+. ..++.+++++|+
T Consensus 286 ~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 286 PVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp CSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred ccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 5 367999999999997 44444442 467889998884
No 34
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.96 E-value=1.3e-27 Score=284.92 Aligned_cols=274 Identities=19% Similarity=0.218 Sum_probs=229.8
Q ss_pred ccEEEEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCc--Cccccccc---ceeEEEccCCcCcCcCCcccCCCCCCC
Q 003737 92 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGS--FSPQWASL---QLVELSVMGNRLSGPFPKVLTNITTLK 166 (799)
Q Consensus 92 ~~v~~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~--~p~~~~~l---~L~~L~Ls~N~l~~~~p~~~~~L~~L~ 166 (799)
.+++.|++++|.+++..+..|..+++|++|++++|.+... ....|..+ +|++|++++|++++..|..|..+++|+
T Consensus 329 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 408 (680)
T 1ziw_A 329 KCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLE 408 (680)
T ss_dssp TTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred CCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCC
Confidence 4677888888888887777888888888888888875432 22333332 488999999999988899999999999
Q ss_pred EEEeeCCcCCCCCC-ccccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccCCcCC--CcCCccccCCCCCCEEEcc
Q 003737 167 NLSIEGNLFTGSIP-PDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFS--GKIPEFIGKWKKIQKLHIQ 243 (799)
Q Consensus 167 ~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~L~ 243 (799)
+|+|++|.+++.+| ..|..+++|++|++++|++++..+..|..+++|+.|++++|.+. +.+|..|..+++|++|+|+
T Consensus 409 ~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls 488 (680)
T 1ziw_A 409 VLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLS 488 (680)
T ss_dssp EEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECC
T ss_pred EEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECC
Confidence 99999999987666 67899999999999999999888889999999999999999986 5788999999999999999
Q ss_pred CCCCCCCCchhhhcCCCCCeEEcCCCCCCCC---CCC-----ccCC-CCccEEEccCCcCcccCCccccCCCCCCeeccc
Q 003737 244 GSSLEGPIPASISALTSLTDLRISDLKGSES---AFP-----KLDK-MNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLS 314 (799)
Q Consensus 244 ~N~l~~~~p~~~~~l~~L~~L~L~~n~~~~~---~~~-----~l~~-~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls 314 (799)
+|++++..+..|..+++|++|++++|..... .+| .+.. .+|+.|+|++|+++...+..|..+++|+.|+|+
T Consensus 489 ~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls 568 (680)
T 1ziw_A 489 NNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLG 568 (680)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECC
Confidence 9999988888899999999999999765432 111 2445 789999999999995555678999999999999
Q ss_pred cccCCCCCchhhhccCCCCEEeccCCcCCCcCChhh---hcCCCEEEeecCcCc
Q 003737 315 FNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYI---FNSNKNVDISLNNFT 365 (799)
Q Consensus 315 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~---~~~l~~l~ls~N~~~ 365 (799)
+|++++..+..|..+++|+.|+|++|++++..|..+ +..++.+++++|.+.
T Consensus 569 ~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~ 622 (680)
T 1ziw_A 569 LNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFD 622 (680)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCC
T ss_pred CCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcc
Confidence 999998777788999999999999999997666544 468899999999775
No 35
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.95 E-value=7.7e-28 Score=293.39 Aligned_cols=277 Identities=21% Similarity=0.205 Sum_probs=239.8
Q ss_pred cccEEEEEeCCCCCcccC-CccccCCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCcCcCcCCcc--cCCCCCCC
Q 003737 91 TCHVVTIALKAQNLTGTL-PTELSKLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNRLSGPFPKV--LTNITTLK 166 (799)
Q Consensus 91 ~~~v~~L~L~~~~l~g~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~--~~~L~~L~ 166 (799)
..+++.|+|++|...+.+ |..|.++++|++|+|++|.+++..|..|..++ |++|+|++|.+++.+|.. |.++++|+
T Consensus 47 l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~ 126 (844)
T 3j0a_A 47 LEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALT 126 (844)
T ss_dssp CCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCC
T ss_pred cccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCC
Confidence 357899999999877777 67899999999999999999999999999998 999999999999877665 99999999
Q ss_pred EEEeeCCcCCCCCC-ccccCCCCCCEEEcccCcCCccCChhccCC--CCCCEEEccCCcCCCcCCccccCCCC------C
Q 003737 167 NLSIEGNLFTGSIP-PDIRKLINLQKLILSSNSFTGELPAELTKL--TNLNDLRISDNNFSGKIPEFIGKWKK------I 237 (799)
Q Consensus 167 ~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l--~~L~~L~Ls~N~l~~~~p~~~~~l~~------L 237 (799)
+|+|++|.+++..+ ..|+++++|++|+|++|.+++..|..+..+ ++|+.|+++.|.+.+..|..++.+.+ |
T Consensus 127 ~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L 206 (844)
T 3j0a_A 127 RLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVL 206 (844)
T ss_dssp EEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCB
T ss_pred EEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCCccccccccchhhcCCccccCce
Confidence 99999999987665 579999999999999999999999999887 89999999999999988888777665 9
Q ss_pred CEEEccCCCCCCCCchhhhc--------------------------------------CCCCCeEEcCCCCCCCCCCCcc
Q 003737 238 QKLHIQGSSLEGPIPASISA--------------------------------------LTSLTDLRISDLKGSESAFPKL 279 (799)
Q Consensus 238 ~~L~L~~N~l~~~~p~~~~~--------------------------------------l~~L~~L~L~~n~~~~~~~~~l 279 (799)
++|++++|.+++..+..+.. .++|+.|++++|.........+
T Consensus 207 ~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~ 286 (844)
T 3j0a_A 207 EILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVF 286 (844)
T ss_dssp SEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCS
T ss_pred eEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhccccCCccEEECCCCcccccChhhh
Confidence 99999999888766655443 2578999999866554333335
Q ss_pred CC-CCccEEEccCCcCcccCCccccCCCCCCeeccccccCCCCCchhhhccCCCCEEeccCCcCCCcCChhh--hcCCCE
Q 003737 280 DK-MNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYI--FNSNKN 356 (799)
Q Consensus 280 ~~-~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~--~~~l~~ 356 (799)
.. .+|+.|+|++|++++..|..|..+++|++|+|++|++++..|..|..+++|+.|++++|++++..+..+ ...++.
T Consensus 287 ~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~ 366 (844)
T 3j0a_A 287 ETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQT 366 (844)
T ss_dssp SSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCE
T ss_pred hcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCE
Confidence 55 789999999999999989999999999999999999998889999999999999999999986655544 357889
Q ss_pred EEeecCcCccc
Q 003737 357 VDISLNNFTWE 367 (799)
Q Consensus 357 l~ls~N~~~g~ 367 (799)
|+|++|.+++.
T Consensus 367 L~Ls~N~l~~i 377 (844)
T 3j0a_A 367 LDLRDNALTTI 377 (844)
T ss_dssp EEEETCCSCCC
T ss_pred EECCCCCCCcc
Confidence 99999998853
No 36
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.95 E-value=1.1e-27 Score=279.38 Aligned_cols=280 Identities=18% Similarity=0.174 Sum_probs=199.5
Q ss_pred ccEEEEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEEEe
Q 003737 92 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLSI 170 (799)
Q Consensus 92 ~~v~~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L 170 (799)
.+++.|+|++|.+++..|..|.++++|++|+|++|.+++..|..|..++ |++|++++|++++..+..++++++|++|++
T Consensus 52 ~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 131 (570)
T 2z63_A 52 PELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNV 131 (570)
T ss_dssp SSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEEC
T ss_pred CCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccccccccccCCCccccccccccEEec
Confidence 3567777777777766666677777777777777777766666666665 777777777666555545666666666666
Q ss_pred eCCcCCC-CCCccccCCCCCCEEEcccCcCCccCChhc------------------------------------------
Q 003737 171 EGNLFTG-SIPPDIRKLINLQKLILSSNSFTGELPAEL------------------------------------------ 207 (799)
Q Consensus 171 s~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~------------------------------------------ 207 (799)
++|.+++ .+|..|+++++|++|++++|++++..|..+
T Consensus 132 ~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~~L~~L~l~~n~ 211 (570)
T 2z63_A 132 AHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNF 211 (570)
T ss_dssp CSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCC
T ss_pred CCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCCCceecCHHHhccCcceeEeccccc
Confidence 6666664 356666666666666666665543221111
Q ss_pred --------------------------------------------------------------------------------
Q 003737 208 -------------------------------------------------------------------------------- 207 (799)
Q Consensus 208 -------------------------------------------------------------------------------- 207 (799)
T Consensus 212 ~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~ 291 (570)
T 2z63_A 212 DSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVS 291 (570)
T ss_dssp SCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGGTTCSEEEEES
T ss_pred ccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcchhhhhhchhhhcCcCcccEEEecC
Confidence
Q ss_pred ----------------------------------------------------cCCCCCCEEEccCCcCCCcC--CccccC
Q 003737 208 ----------------------------------------------------TKLTNLNDLRISDNNFSGKI--PEFIGK 233 (799)
Q Consensus 208 ----------------------------------------------------~~l~~L~~L~Ls~N~l~~~~--p~~~~~ 233 (799)
..+++|++|++++|++++.. |..+..
T Consensus 292 ~~l~~l~~~~~~~~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~ 371 (570)
T 2z63_A 292 VTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFG 371 (570)
T ss_dssp CEECSCCBCCSCCCCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBCCCCBCTTCCEEECCSSCCBEEEEEEHHHHT
T ss_pred ccchhhhhhhccCCccEEeeccCcccccCcccccccCEEeCcCCccccccccccCCCCCEEeCcCCccCccccccccccc
Confidence 12334455555555554332 556677
Q ss_pred CCCCCEEEccCCCCCCCCchhhhcCCCCCeEEcCCCCCCCCCC-CccCC-CCccEEEccCCcCcccCCccccCCCCCCee
Q 003737 234 WKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAF-PKLDK-MNLKTLILTKCLIHGEIPDYIGDMTKLKNI 311 (799)
Q Consensus 234 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~~~~~~~-~~l~~-~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 311 (799)
+++|++|++++|.+++..+. +..+++|+.|++++|....... ..+.. ++|++|++++|.+++..|..+..+++|++|
T Consensus 372 ~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 450 (570)
T 2z63_A 372 TTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVL 450 (570)
T ss_dssp CSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEE
T ss_pred cCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEE
Confidence 88999999999998865544 8899999999999865543322 23444 789999999999998888889999999999
Q ss_pred ccccccCC-CCCchhhhccCCCCEEeccCCcCCCcCChhhh--cCCCEEEeecCcCcccCCCCC
Q 003737 312 DLSFNNLT-GGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIF--NSNKNVDISLNNFTWESSDPI 372 (799)
Q Consensus 312 ~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~--~~l~~l~ls~N~~~g~~p~~~ 372 (799)
++++|+++ +.+|..+..+++|+.|++++|++++..|..+. ..++.|++++|++++.+|..+
T Consensus 451 ~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 514 (570)
T 2z63_A 451 KMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIF 514 (570)
T ss_dssp ECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTT
T ss_pred ECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHh
Confidence 99999987 57888889999999999999999987777664 468899999999988776554
No 37
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.95 E-value=7.8e-28 Score=279.33 Aligned_cols=120 Identities=24% Similarity=0.292 Sum_probs=106.0
Q ss_pred cccEEEEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCcCcC-cCCcccCCCCCCCEE
Q 003737 91 TCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNRLSG-PFPKVLTNITTLKNL 168 (799)
Q Consensus 91 ~~~v~~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~-~~p~~~~~L~~L~~L 168 (799)
..++++|+|++|.+++..|..|..+++|++|+|++|.+++.+|..|+.++ |++|++++|.+++ ..|..++++++|++|
T Consensus 49 l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L 128 (549)
T 2z81_A 49 CANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTL 128 (549)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEE
T ss_pred CCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEE
Confidence 35799999999999998889999999999999999999999888899887 9999999999987 467889999999999
Q ss_pred EeeCCcCCCCCC-ccccCCCCCCEEEcccCcCCccCChhccCC
Q 003737 169 SIEGNLFTGSIP-PDIRKLINLQKLILSSNSFTGELPAELTKL 210 (799)
Q Consensus 169 ~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 210 (799)
++++|.+.+.+| ..|.++++|++|++++|.+++..|..+.++
T Consensus 129 ~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l 171 (549)
T 2z81_A 129 RIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSI 171 (549)
T ss_dssp EEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTC
T ss_pred ECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhcc
Confidence 999998555555 579999999999999999998888776554
No 38
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.95 E-value=2.4e-28 Score=261.92 Aligned_cols=245 Identities=20% Similarity=0.220 Sum_probs=148.8
Q ss_pred EEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCcCcC--cCCcccCCCCCCCEEEeeC
Q 003737 96 TIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNRLSG--PFPKVLTNITTLKNLSIEG 172 (799)
Q Consensus 96 ~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~--~~p~~~~~L~~L~~L~Ls~ 172 (799)
.+++++++++ .+|..+. ++|++|+|++|+++...+..|..++ |++|+|++|.++. ..|..+..+++|++|+|++
T Consensus 11 ~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~ 87 (306)
T 2z66_A 11 EIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSF 87 (306)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCS
T ss_pred EEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCC
Confidence 4555556665 4555443 5788888888888766655666665 7777777777763 2355666677777777777
Q ss_pred CcCCCCCCccccCCCCCCEEEcccCcCCccCC-hhccCCCCCCEEEccCCcCCCcCCccccCCCCCCEEEccCCCCCC-C
Q 003737 173 NLFTGSIPPDIRKLINLQKLILSSNSFTGELP-AELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEG-P 250 (799)
Q Consensus 173 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~ 250 (799)
|.++ .+|..+..+++|++|++++|++++..+ ..+..+++|++|++++|.+.+..|..+..+++|++|++++|.+++ .
T Consensus 88 n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 166 (306)
T 2z66_A 88 NGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENF 166 (306)
T ss_dssp CSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGE
T ss_pred Cccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCcccccc
Confidence 7776 466667777777777777777775443 467777777777777777777777777777777777777777765 4
Q ss_pred CchhhhcCCCCCeEEcCCCCCCCCCCCccCC-CCccEEEccCCcCcccCCccccCCCCCCeeccccccCCCCCchhhhcc
Q 003737 251 IPASISALTSLTDLRISDLKGSESAFPKLDK-MNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKL 329 (799)
Q Consensus 251 ~p~~~~~l~~L~~L~L~~n~~~~~~~~~l~~-~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l 329 (799)
+|..+..+++|++|++++|.........+.. ++|+.|+|++|.+++..+..+..+++|+.|+|++|++++..|..+..+
T Consensus 167 ~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~ 246 (306)
T 2z66_A 167 LPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHF 246 (306)
T ss_dssp ECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCC
T ss_pred chhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhh
Confidence 5556666655555555543322211111222 344444444444444444444444555555555555554444444444
Q ss_pred C-CCCEEeccCCcCCC
Q 003737 330 A-KTNFMYLTGNKLTG 344 (799)
Q Consensus 330 ~-~L~~L~L~~N~l~g 344 (799)
+ +|+.|+|++|++++
T Consensus 247 ~~~L~~L~L~~N~~~~ 262 (306)
T 2z66_A 247 PSSLAFLNLTQNDFAC 262 (306)
T ss_dssp CTTCCEEECTTCCEEC
T ss_pred hccCCEEEccCCCeec
Confidence 2 45555555555543
No 39
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.95 E-value=5.4e-27 Score=260.30 Aligned_cols=249 Identities=18% Similarity=0.194 Sum_probs=212.4
Q ss_pred cCCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEEEeeCCcCCCCCCccccCCCCCCE
Q 003737 113 SKLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQK 191 (799)
Q Consensus 113 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 191 (799)
..++++++|++++|.++..++..+..++ |++|++++|.+++..+..|..+++|++|+|++|.+++..|..|.++++|++
T Consensus 42 ~~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 121 (390)
T 3o6n_A 42 ITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTV 121 (390)
T ss_dssp GGGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred cccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCE
Confidence 4568999999999999988777788887 999999999999888889999999999999999999888888999999999
Q ss_pred EEcccCcCCccCChhccCCCCCCEEEccCCcCCCcCCccccCCCCCCEEEccCCCCCCCCchhhhcCCCCCeEEcCCCCC
Q 003737 192 LILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKG 271 (799)
Q Consensus 192 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~~ 271 (799)
|++++|.++...+..|.++++|++|++++|.+++..|..|..+++|++|++++|.+++.. +..+++|+.|++++|..
T Consensus 122 L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~---~~~l~~L~~L~l~~n~l 198 (390)
T 3o6n_A 122 LVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLL 198 (390)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCC---GGGCTTCSEEECCSSCC
T ss_pred EECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccc---cccccccceeecccccc
Confidence 999999999544455799999999999999999888889999999999999999998753 45566777777666443
Q ss_pred CCCCCC-----------------ccCCCCccEEEccCCcCcccCCccccCCCCCCeeccccccCCCCCchhhhccCCCCE
Q 003737 272 SESAFP-----------------KLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNF 334 (799)
Q Consensus 272 ~~~~~~-----------------~l~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 334 (799)
.....+ .....+|+.|++++|.+++. ..+..+++|++|+|++|++++..|..|..+++|+.
T Consensus 199 ~~~~~~~~L~~L~l~~n~l~~~~~~~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 276 (390)
T 3o6n_A 199 STLAIPIAVEELDASHNSINVVRGPVNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLER 276 (390)
T ss_dssp SEEECCSSCSEEECCSSCCCEEECCCCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCE
T ss_pred cccCCCCcceEEECCCCeeeeccccccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCE
Confidence 321111 11114799999999999864 57899999999999999999999999999999999
Q ss_pred EeccCCcCCCcCChhh--hcCCCEEEeecCcCccc
Q 003737 335 MYLTGNKLTGPVPKYI--FNSNKNVDISLNNFTWE 367 (799)
Q Consensus 335 L~L~~N~l~g~~p~~~--~~~l~~l~ls~N~~~g~ 367 (799)
|+|++|++++ +|... .+.++.|++++|+++..
T Consensus 277 L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~~~ 310 (390)
T 3o6n_A 277 LYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLLHV 310 (390)
T ss_dssp EECCSSCCCE-EECSSSCCTTCCEEECCSSCCCCC
T ss_pred EECCCCcCcc-cCcccCCCCCCCEEECCCCcceec
Confidence 9999999996 45443 45789999999999843
No 40
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=3.4e-27 Score=267.23 Aligned_cols=242 Identities=14% Similarity=0.171 Sum_probs=180.9
Q ss_pred EEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEEEeeCCc
Q 003737 96 TIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNL 174 (799)
Q Consensus 96 ~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~ 174 (799)
.+++++.+++ .+|..+. ++|++|+|++|++++..+..|..++ |++|+|++|++++..|..|.++++|++|+|++|+
T Consensus 58 ~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~ 134 (452)
T 3zyi_A 58 KVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNW 134 (452)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCc
Confidence 4566666776 5666554 6888888888888887777777776 8888888888887777788888888888888888
Q ss_pred CCCCCCccccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccCC-cCCCcCCccccCCCCCCEEEccCCCCCCCCch
Q 003737 175 FTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDN-NFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPA 253 (799)
Q Consensus 175 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 253 (799)
+++..+..|..+++|++|+|++|+++...+..|.++++|++|++++| .+....+..|..+++|++|+|++|++++. |
T Consensus 135 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~- 212 (452)
T 3zyi_A 135 LTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P- 212 (452)
T ss_dssp CSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C-
T ss_pred CCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c-
Confidence 87665566777888888888888887666667777888888888774 34433344577777777777777776632 2
Q ss_pred hhhcCCCCCeEEcCCCCCCCCCCCccCCCCccEEEccCCcCcccCCccccCCCCCCeeccccccCCCCCchhhhccCCCC
Q 003737 254 SISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTN 333 (799)
Q Consensus 254 ~~~~l~~L~~L~L~~n~~~~~~~~~l~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 333 (799)
.+..+ .+|+.|+|++|.+++..|..|..+++|+.|+|++|++++..|..|..+++|+
T Consensus 213 ~~~~l-----------------------~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 269 (452)
T 3zyi_A 213 NLTPL-----------------------VGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLV 269 (452)
T ss_dssp CCTTC-----------------------TTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred ccccc-----------------------ccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCC
Confidence 12222 4677777888888888888888899999999999999888888888899999
Q ss_pred EEeccCCcCCCcCChhh--hcCCCEEEeecCcCc
Q 003737 334 FMYLTGNKLTGPVPKYI--FNSNKNVDISLNNFT 365 (799)
Q Consensus 334 ~L~L~~N~l~g~~p~~~--~~~l~~l~ls~N~~~ 365 (799)
.|+|++|++++..+..+ ...++.|+|++|.+.
T Consensus 270 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 270 ELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWN 303 (452)
T ss_dssp EEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEE
T ss_pred EEECCCCcCCccChHHhccccCCCEEEccCCCcC
Confidence 99999999885444433 246788999998664
No 41
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.95 E-value=4.9e-27 Score=275.34 Aligned_cols=252 Identities=18% Similarity=0.192 Sum_probs=216.5
Q ss_pred CCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEEEeeCCcCCCCCCccccCCCCCCEE
Q 003737 114 KLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKL 192 (799)
Q Consensus 114 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 192 (799)
.+.+++.|++++|.+...++..+..++ |++|+|++|.+++..|..|+.+++|++|+|++|.+++..|..|+++++|++|
T Consensus 49 ~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 128 (597)
T 3oja_B 49 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 128 (597)
T ss_dssp GGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEE
Confidence 468999999999999988888888887 9999999999999999999999999999999999999888889999999999
Q ss_pred EcccCcCCccCChhccCCCCCCEEEccCCcCCCcCCccccCCCCCCEEEccCCCCCCCCchhhhcCCCCCeEEcCCCCCC
Q 003737 193 ILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGS 272 (799)
Q Consensus 193 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~~~ 272 (799)
+|++|.+++..+..|.++++|++|+|++|.+++..|..|+.+++|++|+|++|.+++.. +..+++|+.|++++|...
T Consensus 129 ~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~ 205 (597)
T 3oja_B 129 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLS 205 (597)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCS
T ss_pred EeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCccc
Confidence 99999999666666799999999999999999999999999999999999999999753 455667777777665433
Q ss_pred CCCCC-----------------ccCCCCccEEEccCCcCcccCCccccCCCCCCeeccccccCCCCCchhhhccCCCCEE
Q 003737 273 ESAFP-----------------KLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFM 335 (799)
Q Consensus 273 ~~~~~-----------------~l~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 335 (799)
....| .....+|+.|+|++|.+++ +..+..+++|+.|+|++|.+++.+|..|..+++|+.|
T Consensus 206 ~l~~~~~L~~L~ls~n~l~~~~~~~~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 283 (597)
T 3oja_B 206 TLAIPIAVEELDASHNSINVVRGPVNVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERL 283 (597)
T ss_dssp EEECCTTCSEEECCSSCCCEEECSCCSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEE
T ss_pred cccCCchhheeeccCCcccccccccCCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEE
Confidence 21111 1111479999999999986 4678999999999999999999999999999999999
Q ss_pred eccCCcCCCcCChhh--hcCCCEEEeecCcCcccCCCCC
Q 003737 336 YLTGNKLTGPVPKYI--FNSNKNVDISLNNFTWESSDPI 372 (799)
Q Consensus 336 ~L~~N~l~g~~p~~~--~~~l~~l~ls~N~~~g~~p~~~ 372 (799)
+|++|++++ +|..+ .+.++.|+|++|.++. +|..+
T Consensus 284 ~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~~-i~~~~ 320 (597)
T 3oja_B 284 YISNNRLVA-LNLYGQPIPTLKVLDLSHNHLLH-VERNQ 320 (597)
T ss_dssp ECTTSCCCE-EECSSSCCTTCCEEECCSSCCCC-CGGGH
T ss_pred ECCCCCCCC-CCcccccCCCCcEEECCCCCCCc-cCccc
Confidence 999999996 45544 4578999999999984 55443
No 42
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.95 E-value=6.8e-28 Score=263.86 Aligned_cols=255 Identities=19% Similarity=0.251 Sum_probs=222.1
Q ss_pred ccEEEEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEEEe
Q 003737 92 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLSI 170 (799)
Q Consensus 92 ~~v~~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L 170 (799)
.++++|++++|++++..+..|.++++|++|+|++|++++..|..|..++ |++|++++|++++..+..|.++++|++|+|
T Consensus 52 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 131 (353)
T 2z80_A 52 EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNL 131 (353)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEEC
T ss_pred ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEEC
Confidence 4799999999999987777999999999999999999999899999987 999999999999766666999999999999
Q ss_pred eCCcCCCCCC-ccccCCCCCCEEEcccC-cCCccCChhccCCCCCCEEEccCCcCCCcCCccccCCCCCCEEEccCCCCC
Q 003737 171 EGNLFTGSIP-PDIRKLINLQKLILSSN-SFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLE 248 (799)
Q Consensus 171 s~N~l~~~~p-~~~~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 248 (799)
++|++++..+ ..|.++++|++|++++| .+++..+..|.++++|++|++++|++++..|..+..+++|++|++++|.++
T Consensus 132 ~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~ 211 (353)
T 2z80_A 132 LGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHI 211 (353)
T ss_dssp TTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCST
T ss_pred CCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccc
Confidence 9999985433 37899999999999999 477666788999999999999999999999999999999999999999997
Q ss_pred CCCchhhhcCCCCCeEEcCCCCCCCCCCCccC---C-CCccEEEccCCcCcc----cCCccccCCCCCCeeccccccCCC
Q 003737 249 GPIPASISALTSLTDLRISDLKGSESAFPKLD---K-MNLKTLILTKCLIHG----EIPDYIGDMTKLKNIDLSFNNLTG 320 (799)
Q Consensus 249 ~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~l~---~-~~L~~L~L~~N~l~~----~~p~~l~~l~~L~~L~Ls~N~l~~ 320 (799)
...+..+..+++|+.|++++|......+..+. . ..++.++|+++.+++ .+|..+..+++|+.|+|++|+++.
T Consensus 212 ~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~ 291 (353)
T 2z80_A 212 LLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKS 291 (353)
T ss_dssp THHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCC
T ss_pred cchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCc
Confidence 55445566799999999999776654433322 2 578899999999886 467889999999999999999995
Q ss_pred CCchh-hhccCCCCEEeccCCcCCCcCC
Q 003737 321 GIPTT-FEKLAKTNFMYLTGNKLTGPVP 347 (799)
Q Consensus 321 ~~p~~-~~~l~~L~~L~L~~N~l~g~~p 347 (799)
+|.. |..+++|+.|++++|++++..|
T Consensus 292 -i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 292 -VPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp -CCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred -cCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 5554 6999999999999999998776
No 43
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=2e-27 Score=252.02 Aligned_cols=251 Identities=18% Similarity=0.198 Sum_probs=200.4
Q ss_pred EEEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEEEeeCC
Q 003737 95 VTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLSIEGN 173 (799)
Q Consensus 95 ~~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N 173 (799)
+.+++++++++ .+|..+ .++|++|+|++|.+++..+..|..++ |++|++++|.+++..|..|.++++|++|+|++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 67788888887 566544 47899999999999988877888876 889999988888888888888888999999888
Q ss_pred c-CCCCCCccccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccCCcCCCcCCccccCCCCCCEEEccCCCCCCCCc
Q 003737 174 L-FTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIP 252 (799)
Q Consensus 174 ~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 252 (799)
. ++...|..|..+++|++|++++|.+++..|..+.++++|++|++++|++++..+..|+.+++|++|+|++|++++..+
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 170 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPE 170 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECT
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCH
Confidence 7 766667788888888888888888887778888888888888888888887767778888888888888888876555
Q ss_pred hhhhcCCCCCeEEcCCCCCCCCCCCccCCCCccEEEccCCcCcccCCccccCCCCCCeeccccccCCCCCchhhhccCCC
Q 003737 253 ASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKT 332 (799)
Q Consensus 253 ~~~~~l~~L~~L~L~~n~~~~~~~~~l~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 332 (799)
..+..+++ |+.|++++|.+++..|..+..+++|+.|++++|++++..+..+..+++|
T Consensus 171 ~~~~~l~~-----------------------L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 227 (285)
T 1ozn_A 171 RAFRGLHS-----------------------LDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRAL 227 (285)
T ss_dssp TTTTTCTT-----------------------CCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTC
T ss_pred HHhcCccc-----------------------cCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCccc
Confidence 55555544 5556666777777888899999999999999999998777889999999
Q ss_pred CEEeccCCcCCCcCCh-hhhcCCCEEEeecCcCcccCCCC
Q 003737 333 NFMYLTGNKLTGPVPK-YIFNSNKNVDISLNNFTWESSDP 371 (799)
Q Consensus 333 ~~L~L~~N~l~g~~p~-~~~~~l~~l~ls~N~~~g~~p~~ 371 (799)
+.|++++|+++...+. .+...++.++.+.|.+....|..
T Consensus 228 ~~L~l~~N~~~c~~~~~~~~~~l~~~~~~~~~~~c~~p~~ 267 (285)
T 1ozn_A 228 QYLRLNDNPWVCDCRARPLWAWLQKFRGSSSEVPCSLPQR 267 (285)
T ss_dssp CEEECCSSCEECSGGGHHHHHHHHHCCSEECCCBEEESGG
T ss_pred CEEeccCCCccCCCCcHHHHHHHHhcccccCccccCCchH
Confidence 9999999999875553 23344455556677776666654
No 44
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.95 E-value=8.8e-27 Score=274.73 Aligned_cols=155 Identities=21% Similarity=0.252 Sum_probs=137.8
Q ss_pred EEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEEEeeCCc
Q 003737 96 TIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNL 174 (799)
Q Consensus 96 ~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~ 174 (799)
+.+.++.+++ .+|..+. +++++|||++|+|++..+..|..++ |++|+|++|+|++..|.+|.+|++|++|+|++|+
T Consensus 35 ~~~c~~~~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~ 111 (635)
T 4g8a_A 35 TYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 111 (635)
T ss_dssp EEECTTSCCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred EEECCCCCcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCc
Confidence 3466777787 6776653 5899999999999999999999998 9999999999999889999999999999999999
Q ss_pred CCCCCCccccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccCCcCCC-cCCccccCCCCCCEEEccCCCCCCCCch
Q 003737 175 FTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSG-KIPEFIGKWKKIQKLHIQGSSLEGPIPA 253 (799)
Q Consensus 175 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 253 (799)
+++..+..|.++++|++|+|++|++++..+..|+++++|++|++++|.+++ .+|..++.+++|++|+|++|++++..+.
T Consensus 112 l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 191 (635)
T 4g8a_A 112 IQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT 191 (635)
T ss_dssp CCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGG
T ss_pred CCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccc
Confidence 997777789999999999999999998777789999999999999999976 4688899999999999999988764443
No 45
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=7.8e-27 Score=263.37 Aligned_cols=253 Identities=17% Similarity=0.186 Sum_probs=193.5
Q ss_pred EEEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEEEeeCC
Q 003737 95 VTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLSIEGN 173 (799)
Q Consensus 95 ~~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N 173 (799)
..+++.+.+++ .+|..+. ++++.|+|++|++++..+..|..++ |++|+|++|.+++..+..|.++++|++|+|++|
T Consensus 46 ~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n 122 (440)
T 3zyj_A 46 SKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDN 122 (440)
T ss_dssp CEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSS
T ss_pred CEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCC
Confidence 45677777777 6776665 6889999999999888888888887 888888888888777788888888888888888
Q ss_pred cCCCCCCccccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccCCc-CCCcCCccccCCCCCCEEEccCCCCCCCCc
Q 003737 174 LFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNN-FSGKIPEFIGKWKKIQKLHIQGSSLEGPIP 252 (799)
Q Consensus 174 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 252 (799)
+++...+..|..+++|++|+|++|.++...+..|.++++|++|++++|+ +....+..|.++++|++|+|++|+++. +|
T Consensus 123 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~ 201 (440)
T 3zyj_A 123 RLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE-IP 201 (440)
T ss_dssp CCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS-CC
T ss_pred cCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc-cc
Confidence 8886666678888888888888888886666678888888888888844 443344467778888888888887763 22
Q ss_pred hhhhcCCCCCeEEcCCCCCCCCCCCccCCCCccEEEccCCcCcccCCccccCCCCCCeeccccccCCCCCchhhhccCCC
Q 003737 253 ASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKT 332 (799)
Q Consensus 253 ~~~~~l~~L~~L~L~~n~~~~~~~~~l~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 332 (799)
. +..+ .+|+.|+|++|.+++..|..|..+++|+.|+|++|++++..+..|..+++|
T Consensus 202 ~-~~~l-----------------------~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 257 (440)
T 3zyj_A 202 N-LTPL-----------------------IKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSL 257 (440)
T ss_dssp C-CTTC-----------------------SSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTC
T ss_pred c-cCCC-----------------------cccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCC
Confidence 1 2222 457777788888888888888888899999999999888888888888899
Q ss_pred CEEeccCCcCCCcCChhh--hcCCCEEEeecCcCcccCCCCCcCCCCCcccee
Q 003737 333 NFMYLTGNKLTGPVPKYI--FNSNKNVDISLNNFTWESSDPIECPRGSVNLVE 383 (799)
Q Consensus 333 ~~L~L~~N~l~g~~p~~~--~~~l~~l~ls~N~~~g~~p~~~~~~~~~~~~~~ 383 (799)
+.|+|++|++++..+..+ ...++.|+|++|.+. |++....+..
T Consensus 258 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~--------CdC~l~~l~~ 302 (440)
T 3zyj_A 258 VEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN--------CNCDILWLSW 302 (440)
T ss_dssp CEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEE--------CSSTTHHHHH
T ss_pred CEEECCCCCCCccChhHhccccCCCEEEcCCCCcc--------CCCCchHHHH
Confidence 999999998885444433 246788899988764 7765444333
No 46
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.95 E-value=9.4e-27 Score=252.02 Aligned_cols=224 Identities=22% Similarity=0.303 Sum_probs=184.7
Q ss_pred CCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEEEeeCCcCCCCCCccccCCCCCCEE
Q 003737 114 KLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKL 192 (799)
Q Consensus 114 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 192 (799)
..++++.|+|++|.++ .+|..+..++ |++|+|++|.++ .+|..++++++|++|+|++|.++ .+|..++++++|++|
T Consensus 79 ~~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L 155 (328)
T 4fcg_A 79 TQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLREL 155 (328)
T ss_dssp TSTTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEE
T ss_pred cccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEE
Confidence 3578899999999998 5566666676 888888888888 78888888888888888888888 778888888888888
Q ss_pred EcccCcCCccCChhccC---------CCCCCEEEccCCcCCCcCCccccCCCCCCEEEccCCCCCCCCchhhhcCCCCCe
Q 003737 193 ILSSNSFTGELPAELTK---------LTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTD 263 (799)
Q Consensus 193 ~Ls~N~l~~~~p~~~~~---------l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 263 (799)
++++|++.+.+|..+.. +++|++|++++|+++ .+|..++.+++|++|+|++|.+++ +|..+..+++
T Consensus 156 ~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~--- 230 (328)
T 4fcg_A 156 SIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPK--- 230 (328)
T ss_dssp EEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTT---
T ss_pred ECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCC---
Confidence 88888888888877654 778888888888777 677777778888888888887774 4445665555
Q ss_pred EEcCCCCCCCCCCCccCCCCccEEEccCCcCcccCCccccCCCCCCeeccccccCCCCCchhhhccCCCCEEeccCCcCC
Q 003737 264 LRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLT 343 (799)
Q Consensus 264 L~L~~n~~~~~~~~~l~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 343 (799)
|+.|+|++|.+.+.+|..+..+++|++|+|++|++.+.+|..+..+++|+.|+|++|++.
T Consensus 231 --------------------L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~ 290 (328)
T 4fcg_A 231 --------------------LEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNL 290 (328)
T ss_dssp --------------------CCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTC
T ss_pred --------------------CCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCch
Confidence 455566667777888999999999999999999999999999999999999999999999
Q ss_pred CcCChhhhc--CCCEEEeecCcCc
Q 003737 344 GPVPKYIFN--SNKNVDISLNNFT 365 (799)
Q Consensus 344 g~~p~~~~~--~l~~l~ls~N~~~ 365 (799)
+.+|..+.. .++.+++..|.+.
T Consensus 291 ~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 291 SRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp CCCCGGGGGSCTTCEEECCGGGSC
T ss_pred hhccHHHhhccCceEEeCCHHHHH
Confidence 999998864 6788888877654
No 47
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=1.1e-28 Score=265.39 Aligned_cols=241 Identities=20% Similarity=0.267 Sum_probs=119.7
Q ss_pred cEEEEEeCCCCCcccCCccccCCCCCCEEEccCCcCC-CcCccccc-------ccc-eeEEEccCCcCcCcCCccc--CC
Q 003737 93 HVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLT-GSFSPQWA-------SLQ-LVELSVMGNRLSGPFPKVL--TN 161 (799)
Q Consensus 93 ~v~~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~-------~l~-L~~L~Ls~N~l~~~~p~~~--~~ 161 (799)
+++.+++++|.+ .+|..+... |++|+|++|.++ ..+|..+. .++ |++|+|++|++++.+|..+ ..
T Consensus 44 ~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~ 119 (312)
T 1wwl_A 44 SLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEAT 119 (312)
T ss_dssp ECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCC
T ss_pred CceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhc
Confidence 344455555555 445444433 555555555552 23333332 233 5555555555555555544 55
Q ss_pred CCCCCEEEeeCCcCCCCCCccccCC-----CCCCEEEcccCcCCccCChhccCCCCCCEEEccCCcCCCc--CCccc--c
Q 003737 162 ITTLKNLSIEGNLFTGSIPPDIRKL-----INLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGK--IPEFI--G 232 (799)
Q Consensus 162 L~~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~p~~~--~ 232 (799)
+++|++|+|++|++++. |..++.+ ++|++|+|++|++++..|..|.++++|++|++++|++.+. .|..+ +
T Consensus 120 l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~ 198 (312)
T 1wwl_A 120 GPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPL 198 (312)
T ss_dssp SCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTT
T ss_pred CCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhc
Confidence 55555555555555544 4444444 5555555555555555555555555555555555555443 22222 4
Q ss_pred CCCCCCEEEccCCCCCC--CCc-hhhhcCCCCCeEEcCCCCCCCCC-CCccCC-CCccEEEccCCcCcccCCccccCCCC
Q 003737 233 KWKKIQKLHIQGSSLEG--PIP-ASISALTSLTDLRISDLKGSESA-FPKLDK-MNLKTLILTKCLIHGEIPDYIGDMTK 307 (799)
Q Consensus 233 ~l~~L~~L~L~~N~l~~--~~p-~~~~~l~~L~~L~L~~n~~~~~~-~~~l~~-~~L~~L~L~~N~l~~~~p~~l~~l~~ 307 (799)
.+++|++|+|++|++++ .++ ..+.++++|++|++++|...... .+.+.. .+|+.|+|++|+++ .+|..+. ++
T Consensus 199 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~ 275 (312)
T 1wwl_A 199 KFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AK 275 (312)
T ss_dssp SCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SE
T ss_pred cCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CC
Confidence 55555555555555552 111 22334455555555554333222 122222 45555555555555 4444443 45
Q ss_pred CCeeccccccCCCCCchhhhccCCCCEEeccCCcCC
Q 003737 308 LKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLT 343 (799)
Q Consensus 308 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 343 (799)
|++|||++|+|++. |. +..+++|++|++++|+++
T Consensus 276 L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~ 309 (312)
T 1wwl_A 276 LSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFL 309 (312)
T ss_dssp EEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTT
T ss_pred ceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCC
Confidence 55555555555543 33 455555555555555554
No 48
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.94 E-value=2.9e-26 Score=250.05 Aligned_cols=259 Identities=21% Similarity=0.292 Sum_probs=216.1
Q ss_pred ccEEEEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEEEe
Q 003737 92 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLSI 170 (799)
Q Consensus 92 ~~v~~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L 170 (799)
.++++|++++|.+++. +. +..+++|++|++++|.++.. + .+..++ |++|++++|.+++..+ +..+++|++|++
T Consensus 66 ~~L~~L~l~~n~i~~~-~~-~~~l~~L~~L~L~~n~i~~~-~-~~~~l~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~l 139 (347)
T 4fmz_A 66 TNLEYLNLNGNQITDI-SP-LSNLVKLTNLYIGTNKITDI-S-ALQNLTNLRELYLNEDNISDISP--LANLTKMYSLNL 139 (347)
T ss_dssp TTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCC-G-GGTTCTTCSEEECTTSCCCCCGG--GTTCTTCCEEEC
T ss_pred CCccEEEccCCccccc-hh-hhcCCcCCEEEccCCcccCc-h-HHcCCCcCCEEECcCCcccCchh--hccCCceeEEEC
Confidence 5799999999999854 44 99999999999999999874 3 577776 9999999999986543 889999999999
Q ss_pred eCCcCCCCCCccccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccCCcCCCcCCccccCCCCCCEEEccCCCCCCC
Q 003737 171 EGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGP 250 (799)
Q Consensus 171 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 250 (799)
++|.....+ ..+..+++|++|++++|.+.+..+ +..+++|++|++++|.+.+..+ +..+++|+.|++++|.+++.
T Consensus 140 ~~n~~~~~~-~~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~ 214 (347)
T 4fmz_A 140 GANHNLSDL-SPLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDI 214 (347)
T ss_dssp TTCTTCCCC-GGGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCC
T ss_pred CCCCCcccc-cchhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCC
Confidence 999766444 448999999999999999985443 8899999999999999985433 88899999999999999865
Q ss_pred CchhhhcCCCCCeEEcCCCCCCCCCCCccCC-CCccEEEccCCcCcccCCccccCCCCCCeeccccccCCCCCchhhhcc
Q 003737 251 IPASISALTSLTDLRISDLKGSESAFPKLDK-MNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKL 329 (799)
Q Consensus 251 ~p~~~~~l~~L~~L~L~~n~~~~~~~~~l~~-~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l 329 (799)
.+ +..+++|+.|++++|..... +.+.. ++|+.|++++|.+++. ..+..+++|++|++++|++++. ..+..+
T Consensus 215 ~~--~~~~~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l 286 (347)
T 4fmz_A 215 TP--VANMTRLNSLKIGNNKITDL--SPLANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNL 286 (347)
T ss_dssp GG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGC
T ss_pred ch--hhcCCcCCEEEccCCccCCC--cchhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCC
Confidence 54 88899999999998665432 22555 7899999999999864 4688899999999999999864 458899
Q ss_pred CCCCEEeccCCcCCCcCChhhh--cCCCEEEeecCcCcccCC
Q 003737 330 AKTNFMYLTGNKLTGPVPKYIF--NSNKNVDISLNNFTWESS 369 (799)
Q Consensus 330 ~~L~~L~L~~N~l~g~~p~~~~--~~l~~l~ls~N~~~g~~p 369 (799)
++|+.|++++|++++..|..+. ..++.|++++|.+++..|
T Consensus 287 ~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~ 328 (347)
T 4fmz_A 287 SQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP 328 (347)
T ss_dssp TTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG
T ss_pred CCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC
Confidence 9999999999999987777664 478899999999988766
No 49
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.94 E-value=2e-27 Score=254.64 Aligned_cols=258 Identities=17% Similarity=0.166 Sum_probs=215.3
Q ss_pred cccEEEEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCc--Ccccccccc-eeEEEccCCcCcCcCCcccCCCCCCCE
Q 003737 91 TCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGS--FSPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKN 167 (799)
Q Consensus 91 ~~~v~~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~--~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~ 167 (799)
..+++.|+|++++++...+..|.++++|++|+|++|.++.. .+..+..+. |++|++++|.++ .+|..+..+++|++
T Consensus 27 ~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~ 105 (306)
T 2z66_A 27 PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEH 105 (306)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCE
T ss_pred CCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCccc-cChhhcCCCCCCCE
Confidence 35799999999999954445689999999999999999844 355555565 999999999998 57778999999999
Q ss_pred EEeeCCcCCCCCC-ccccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccCCcCCC-cCCccccCCCCCCEEEccCC
Q 003737 168 LSIEGNLFTGSIP-PDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSG-KIPEFIGKWKKIQKLHIQGS 245 (799)
Q Consensus 168 L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~L~~N 245 (799)
|++++|.+++..+ ..+..+++|++|++++|.+++..|..+..+++|++|++++|.+++ .+|..+..+++|++|+|++|
T Consensus 106 L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n 185 (306)
T 2z66_A 106 LDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQC 185 (306)
T ss_dssp EECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTS
T ss_pred EECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCC
Confidence 9999999986655 579999999999999999999899999999999999999999987 68999999999999999999
Q ss_pred CCCCCCchhhhcCCCCCeEEcCCCCCCCCCCCccCC-CCccEEEccCCcCcccCCccccCCC-CCCeeccccccCCCCCc
Q 003737 246 SLEGPIPASISALTSLTDLRISDLKGSESAFPKLDK-MNLKTLILTKCLIHGEIPDYIGDMT-KLKNIDLSFNNLTGGIP 323 (799)
Q Consensus 246 ~l~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~l~~-~~L~~L~L~~N~l~~~~p~~l~~l~-~L~~L~Ls~N~l~~~~p 323 (799)
.+++..|..+..+++|+.|++++|.........+.. .+|+.|+|++|.+++..|..+..++ +|++|+|++|.+++.-+
T Consensus 186 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~ 265 (306)
T 2z66_A 186 QLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 265 (306)
T ss_dssp CCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGG
T ss_pred CcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccC
Confidence 999988999999999999999997765543334555 8999999999999999999999985 99999999999987533
Q ss_pred h--hhhccCCCCEEeccCCcCCCcCChh
Q 003737 324 T--TFEKLAKTNFMYLTGNKLTGPVPKY 349 (799)
Q Consensus 324 ~--~~~~l~~L~~L~L~~N~l~g~~p~~ 349 (799)
. -...+...+.+.+..+.+....|..
T Consensus 266 ~~~~~~~l~~~~~~~~~~~~~~C~~p~~ 293 (306)
T 2z66_A 266 HQSFLQWIKDQRQLLVEVERMECATPSD 293 (306)
T ss_dssp GHHHHHHHHHTGGGBSCGGGCBEEESGG
T ss_pred hHHHHHHHHhhhhhhccccccccCCchh
Confidence 1 1222333444445555555555544
No 50
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.94 E-value=2.7e-26 Score=259.59 Aligned_cols=254 Identities=20% Similarity=0.162 Sum_probs=212.1
Q ss_pred ccEEEEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEEEe
Q 003737 92 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLSI 170 (799)
Q Consensus 92 ~~v~~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L 170 (799)
.+++.|+++++.+++. | .+..+++|++|+|++|++++. | ++.++ |++|++++|++++. | ++++++|++|++
T Consensus 42 ~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L 113 (457)
T 3bz5_A 42 ATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNC 113 (457)
T ss_dssp TTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEEC
T ss_pred CCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEEC
Confidence 5799999999999974 5 799999999999999999986 3 77776 99999999999975 4 899999999999
Q ss_pred eCCcCCCCCCccccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccCCcCCCcCCccccCCCCCCEEEccCCCCCCC
Q 003737 171 EGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGP 250 (799)
Q Consensus 171 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 250 (799)
++|++++ +| ++.+++|++|++++|++++ ++ +..+++|++|++++|+..+.+ .++.+++|++|++++|++++
T Consensus 114 ~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~-l~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~- 184 (457)
T 3bz5_A 114 DTNKLTK-LD--VSQNPLLTYLNCARNTLTE-ID--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE- 184 (457)
T ss_dssp CSSCCSC-CC--CTTCTTCCEEECTTSCCSC-CC--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC-
T ss_pred CCCcCCe-ec--CCCCCcCCEEECCCCccce-ec--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce-
Confidence 9999986 44 8999999999999999997 43 889999999999999766666 48899999999999999997
Q ss_pred CchhhhcCCCCCeEEcCCCCCCCCCCCccCC-CCccEEEccCCcCcccCCccccCCCCCCeeccccccCCCCCchhhhcc
Q 003737 251 IPASISALTSLTDLRISDLKGSESAFPKLDK-MNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKL 329 (799)
Q Consensus 251 ~p~~~~~l~~L~~L~L~~n~~~~~~~~~l~~-~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l 329 (799)
+| +..+++|+.|++++|+..... +.. ++|+.|++++|++++ +| +..+++|+.|++++|++++..+..+.++
T Consensus 185 l~--l~~l~~L~~L~l~~N~l~~~~---l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~~l~~L 256 (457)
T 3bz5_A 185 LD--VSQNKLLNRLNCDTNNITKLD---LNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVSTLSKL 256 (457)
T ss_dssp CC--CTTCTTCCEEECCSSCCSCCC---CTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCTTCTTC
T ss_pred ec--cccCCCCCEEECcCCcCCeec---cccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHHHCCCC
Confidence 44 888999999999997665542 444 789999999999997 56 8899999999999999998765555544
Q ss_pred C-------CCCEEeccCCcCCCcCChhhhcCCCEEEeecCcCcccCCC
Q 003737 330 A-------KTNFMYLTGNKLTGPVPKYIFNSNKNVDISLNNFTWESSD 370 (799)
Q Consensus 330 ~-------~L~~L~L~~N~l~g~~p~~~~~~l~~l~ls~N~~~g~~p~ 370 (799)
. +|+.|++++|++.|.+|..-...++.||+++|.+.+.+|.
T Consensus 257 ~~L~l~~n~L~~L~l~~n~~~~~~~~~~l~~L~~L~Ls~n~~l~~l~~ 304 (457)
T 3bz5_A 257 TTLHCIQTDLLEIDLTHNTQLIYFQAEGCRKIKELDVTHNTQLYLLDC 304 (457)
T ss_dssp CEEECTTCCCSCCCCTTCTTCCEEECTTCTTCCCCCCTTCTTCCEEEC
T ss_pred CEEeccCCCCCEEECCCCccCCcccccccccCCEEECCCCcccceecc
Confidence 4 4566666667766767655556778888888887777663
No 51
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.94 E-value=5.3e-26 Score=257.49 Aligned_cols=227 Identities=17% Similarity=0.177 Sum_probs=172.3
Q ss_pred CEEEccCCcCCCcCcccccccceeEEEccCCcCcCcCCcccCCCCCCCEEEeeCCcCCCCCCccccCCCCCCEEEcccCc
Q 003737 119 KQLDLSRNCLTGSFSPQWASLQLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNS 198 (799)
Q Consensus 119 ~~L~Ls~N~l~~~~p~~~~~l~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 198 (799)
..++.+++.++.. |..+. ..+++|+|++|++++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|+
T Consensus 57 ~~v~c~~~~l~~i-P~~~~-~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~ 134 (452)
T 3zyi_A 57 SKVVCTRRGLSEV-PQGIP-SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNW 134 (452)
T ss_dssp CEEECCSSCCSSC-CSCCC-TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred cEEEECCCCcCcc-CCCCC-CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCc
Confidence 4577777777754 33222 237888888888888778888888888888888888887777778888888888888888
Q ss_pred CCccCChhccCCCCCCEEEccCCcCCCcCCccccCCCCCCEEEccCCC-CCCCCchhhhcCCCCCeEEcCCCCCCCCCCC
Q 003737 199 FTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSS-LEGPIPASISALTSLTDLRISDLKGSESAFP 277 (799)
Q Consensus 199 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~ 277 (799)
+++..+..|..+++|++|+|++|+++...+..|.++++|++|+|++|+ +....+..|.++++
T Consensus 135 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~----------------- 197 (452)
T 3zyi_A 135 LTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFN----------------- 197 (452)
T ss_dssp CSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTT-----------------
T ss_pred CCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCC-----------------
Confidence 886666667778888888888888876666677777788888877743 33222233444444
Q ss_pred ccCCCCccEEEccCCcCcccCCccccCCCCCCeeccccccCCCCCchhhhccCCCCEEeccCCcCCCcCChhhh--cCCC
Q 003737 278 KLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIF--NSNK 355 (799)
Q Consensus 278 ~l~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~--~~l~ 355 (799)
|+.|+|++|++++. | .+..+++|+.|+|++|++++..|..|..+++|+.|+|++|++++..|..+. ..++
T Consensus 198 ------L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 269 (452)
T 3zyi_A 198 ------LKYLNLGMCNIKDM-P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLV 269 (452)
T ss_dssp ------CCEEECTTSCCSSC-C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred ------CCEEECCCCccccc-c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCC
Confidence 55556666666643 3 478899999999999999999999999999999999999999987777664 5789
Q ss_pred EEEeecCcCcccCCCCC
Q 003737 356 NVDISLNNFTWESSDPI 372 (799)
Q Consensus 356 ~l~ls~N~~~g~~p~~~ 372 (799)
.|||++|++++..+..+
T Consensus 270 ~L~L~~N~l~~~~~~~~ 286 (452)
T 3zyi_A 270 ELNLAHNNLSSLPHDLF 286 (452)
T ss_dssp EEECCSSCCSCCCTTSS
T ss_pred EEECCCCcCCccChHHh
Confidence 99999999997665443
No 52
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.94 E-value=1.5e-25 Score=244.53 Aligned_cols=261 Identities=18% Similarity=0.297 Sum_probs=219.9
Q ss_pred ccEEEEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEEEe
Q 003737 92 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLSI 170 (799)
Q Consensus 92 ~~v~~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L 170 (799)
.+++.|+++++.++. ++ .+..+++|++|++++|.+++..+ +..++ |++|++++|.++.. +.+.++++|++|++
T Consensus 44 ~~L~~L~l~~~~i~~-~~-~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~~--~~~~~l~~L~~L~l 117 (347)
T 4fmz_A 44 ESITKLVVAGEKVAS-IQ-GIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITDI--SALQNLTNLRELYL 117 (347)
T ss_dssp TTCSEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCSEEEC
T ss_pred ccccEEEEeCCcccc-ch-hhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccCc--hHHcCCCcCCEEEC
Confidence 578999999999984 44 48999999999999999997655 77777 99999999999863 46999999999999
Q ss_pred eCCcCCCCCCccccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccCCcCCCcCCccccCCCCCCEEEccCCCCCCC
Q 003737 171 EGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGP 250 (799)
Q Consensus 171 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 250 (799)
++|.+++. +. +..+++|++|++++|.....++ .+..+++|++|++++|.+.+..+ +..+++|++|++++|.+++.
T Consensus 118 ~~n~i~~~-~~-~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~ 192 (347)
T 4fmz_A 118 NEDNISDI-SP-LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDI 192 (347)
T ss_dssp TTSCCCCC-GG-GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCC
T ss_pred cCCcccCc-hh-hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccccc
Confidence 99999854 44 8999999999999997665554 49999999999999999986544 88999999999999999865
Q ss_pred CchhhhcCCCCCeEEcCCCCCCCCCCCccCC-CCccEEEccCCcCcccCCccccCCCCCCeeccccccCCCCCchhhhcc
Q 003737 251 IPASISALTSLTDLRISDLKGSESAFPKLDK-MNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKL 329 (799)
Q Consensus 251 ~p~~~~~l~~L~~L~L~~n~~~~~~~~~l~~-~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l 329 (799)
.+ +..+++|+.|++++|...... .+.. .+|+.|++++|.+++..+ +..+++|++|++++|++++. ..+..+
T Consensus 193 ~~--~~~l~~L~~L~l~~n~l~~~~--~~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l 264 (347)
T 4fmz_A 193 SP--LASLTSLHYFTAYVNQITDIT--PVANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDL 264 (347)
T ss_dssp GG--GGGCTTCCEEECCSSCCCCCG--GGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTC
T ss_pred cc--ccCCCccceeecccCCCCCCc--hhhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcC
Confidence 44 889999999999996554322 2444 789999999999986544 88999999999999999964 468999
Q ss_pred CCCCEEeccCCcCCCcCCh-hhhcCCCEEEeecCcCcccCCCCC
Q 003737 330 AKTNFMYLTGNKLTGPVPK-YIFNSNKNVDISLNNFTWESSDPI 372 (799)
Q Consensus 330 ~~L~~L~L~~N~l~g~~p~-~~~~~l~~l~ls~N~~~g~~p~~~ 372 (799)
++|+.|++++|++++. |. .-...++.|++++|.+++..|..+
T Consensus 265 ~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~l 307 (347)
T 4fmz_A 265 TKLKMLNVGSNQISDI-SVLNNLSQLNSLFLNNNQLGNEDMEVI 307 (347)
T ss_dssp TTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCGGGHHHH
T ss_pred CCcCEEEccCCccCCC-hhhcCCCCCCEEECcCCcCCCcChhHh
Confidence 9999999999999964 43 224678999999999998776554
No 53
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.94 E-value=5.6e-26 Score=256.34 Aligned_cols=227 Identities=19% Similarity=0.209 Sum_probs=170.0
Q ss_pred CEEEccCCcCCCcCcccccccceeEEEccCCcCcCcCCcccCCCCCCCEEEeeCCcCCCCCCccccCCCCCCEEEcccCc
Q 003737 119 KQLDLSRNCLTGSFSPQWASLQLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNS 198 (799)
Q Consensus 119 ~~L~Ls~N~l~~~~p~~~~~l~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 198 (799)
+.++.+++.++..+ ..+. -.+++|+|++|++++..+..|.++++|++|+|++|.+++..+..|.++++|++|+|++|+
T Consensus 46 ~~v~c~~~~l~~iP-~~~~-~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~ 123 (440)
T 3zyj_A 46 SKVICVRKNLREVP-DGIS-TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNR 123 (440)
T ss_dssp CEEECCSCCCSSCC-SCCC-TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSC
T ss_pred CEEEeCCCCcCcCC-CCCC-CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCc
Confidence 46788888877543 3222 237778888888887777778888888888888888876666777788888888888888
Q ss_pred CCccCChhccCCCCCCEEEccCCcCCCcCCccccCCCCCCEEEccCCCCCCCC-chhhhcCCCCCeEEcCCCCCCCCCCC
Q 003737 199 FTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPI-PASISALTSLTDLRISDLKGSESAFP 277 (799)
Q Consensus 199 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~L~~n~~~~~~~~ 277 (799)
++...+..|..+++|++|+|++|+++...+..|..+++|++|+|++|+..+.+ +..|.++++
T Consensus 124 l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~----------------- 186 (440)
T 3zyj_A 124 LTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSN----------------- 186 (440)
T ss_dssp CSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSS-----------------
T ss_pred CCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccc-----------------
Confidence 77655566777788888888888777666667777777777777774433222 334444444
Q ss_pred ccCCCCccEEEccCCcCcccCCccccCCCCCCeeccccccCCCCCchhhhccCCCCEEeccCCcCCCcCChhhh--cCCC
Q 003737 278 KLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIF--NSNK 355 (799)
Q Consensus 278 ~l~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~--~~l~ 355 (799)
|+.|+|++|+++ .+| .+..+++|+.|+|++|++++..|..|..+++|+.|+|++|++++..|..+. ..++
T Consensus 187 ------L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 258 (440)
T 3zyj_A 187 ------LRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLV 258 (440)
T ss_dssp ------CCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCC
T ss_pred ------cCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCC
Confidence 555555566665 344 478899999999999999999999999999999999999999987776654 5789
Q ss_pred EEEeecCcCcccCCCCC
Q 003737 356 NVDISLNNFTWESSDPI 372 (799)
Q Consensus 356 ~l~ls~N~~~g~~p~~~ 372 (799)
.|||++|++++..+..+
T Consensus 259 ~L~L~~N~l~~~~~~~~ 275 (440)
T 3zyj_A 259 EINLAHNNLTLLPHDLF 275 (440)
T ss_dssp EEECTTSCCCCCCTTTT
T ss_pred EEECCCCCCCccChhHh
Confidence 99999999997665544
No 54
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.94 E-value=2.1e-28 Score=263.12 Aligned_cols=246 Identities=20% Similarity=0.222 Sum_probs=207.4
Q ss_pred ccCCCCCCEEEccCCcCCCcCcccccccceeEEEccCCcC-cCcCCcccC-------CCCCCCEEEeeCCcCCCCCCccc
Q 003737 112 LSKLRYLKQLDLSRNCLTGSFSPQWASLQLVELSVMGNRL-SGPFPKVLT-------NITTLKNLSIEGNLFTGSIPPDI 183 (799)
Q Consensus 112 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~L~~L~Ls~N~l-~~~~p~~~~-------~L~~L~~L~Ls~N~l~~~~p~~~ 183 (799)
++..++|++|++++|.+ .+|..+... |++|+|++|.+ .+.+|..+. ++++|++|+|++|.+++.+|..+
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~-L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 115 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDI-IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPL 115 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHH-HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCS
T ss_pred EccCCCceeEeeccccc--ccHHHHHHH-HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHH
Confidence 55677899999999999 566655443 89999999999 456777766 79999999999999999999986
Q ss_pred --cCCCCCCEEEcccCcCCccCChhccCC-----CCCCEEEccCCcCCCcCCccccCCCCCCEEEccCCCCCCC--Cchh
Q 003737 184 --RKLINLQKLILSSNSFTGELPAELTKL-----TNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGP--IPAS 254 (799)
Q Consensus 184 --~~l~~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~p~~ 254 (799)
..+++|++|+|++|++++. |..+..+ ++|++|++++|++++..|..|+.+++|++|+|++|++.+. .|..
T Consensus 116 ~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 194 (312)
T 1wwl_A 116 LEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISA 194 (312)
T ss_dssp SSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHH
T ss_pred HHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHH
Confidence 8999999999999999977 8888877 9999999999999998889999999999999999998875 3445
Q ss_pred h--hcCCCCCeEEcCCCCCCCC-CCCc--cCC-CCccEEEccCCcCcccCC-ccccCCCCCCeeccccccCCCCCchhhh
Q 003737 255 I--SALTSLTDLRISDLKGSES-AFPK--LDK-MNLKTLILTKCLIHGEIP-DYIGDMTKLKNIDLSFNNLTGGIPTTFE 327 (799)
Q Consensus 255 ~--~~l~~L~~L~L~~n~~~~~-~~~~--l~~-~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~p~~~~ 327 (799)
+ ..+++|++|++++|.+... .++. +.. .+|+.|+|++|++++.+| ..+..+++|++|+|++|+|+ .+|..+.
T Consensus 195 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~ 273 (312)
T 1wwl_A 195 LCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP 273 (312)
T ss_dssp SCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC
T ss_pred HHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc
Confidence 5 8899999999999765421 1221 223 689999999999998775 45677899999999999999 7787776
Q ss_pred ccCCCCEEeccCCcCCCcCChhh--hcCCCEEEeecCcCcc
Q 003737 328 KLAKTNFMYLTGNKLTGPVPKYI--FNSNKNVDISLNNFTW 366 (799)
Q Consensus 328 ~l~~L~~L~L~~N~l~g~~p~~~--~~~l~~l~ls~N~~~g 366 (799)
++|+.|+|++|++++. |. + ...++.|++++|.+++
T Consensus 274 --~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 274 --AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp --SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred --CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 8999999999999976 65 3 3457899999999875
No 55
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.94 E-value=2e-25 Score=253.75 Aligned_cols=257 Identities=25% Similarity=0.351 Sum_probs=200.9
Q ss_pred ccEEEEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEEEe
Q 003737 92 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLSI 170 (799)
Q Consensus 92 ~~v~~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L 170 (799)
.++++|+|++|.+++..+ +..+++|++|++++|.+.+..+ +..++ |++|++++|.+++..+ +.++++|++|++
T Consensus 68 ~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l 141 (466)
T 1o6v_A 68 NNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLEL 141 (466)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEEE
T ss_pred cCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCCChH--HcCCCCCCEEEC
Confidence 578889999998886544 8888999999999998887765 77776 9999999998886543 888899999999
Q ss_pred eCCcCCCCCCccccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccCCcCCCcCCccccCCCCCCEEEccCCCCCCC
Q 003737 171 EGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGP 250 (799)
Q Consensus 171 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 250 (799)
++|.+++ ++ .+..+++|++|+++ |.+.+. + .+.++++|++|++++|.+++. ..+..+++|++|++++|.+++.
T Consensus 142 ~~n~l~~-~~-~~~~l~~L~~L~l~-~~~~~~-~-~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~ 214 (466)
T 1o6v_A 142 SSNTISD-IS-ALSGLTSLQQLSFG-NQVTDL-K-PLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDI 214 (466)
T ss_dssp EEEEECC-CG-GGTTCTTCSEEEEE-ESCCCC-G-GGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCC
T ss_pred CCCccCC-Ch-hhccCCcccEeecC-CcccCc-h-hhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccc
Confidence 9998875 33 47788888888886 445433 2 388888999999999988753 3478888999999999988876
Q ss_pred CchhhhcCCCCCeEEcCCCCCCCCCCCccCC-CCccEEEccCCcCcccCCccccCCCCCCeeccccccCCCCCchhhhcc
Q 003737 251 IPASISALTSLTDLRISDLKGSESAFPKLDK-MNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKL 329 (799)
Q Consensus 251 ~p~~~~~l~~L~~L~L~~n~~~~~~~~~l~~-~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l 329 (799)
.| +..+++|+.|++++|.... ++.+.. ++|+.|++++|.+++..| +..+++|+.|++++|++++..+ +..+
T Consensus 215 ~~--~~~l~~L~~L~l~~n~l~~--~~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l 286 (466)
T 1o6v_A 215 TP--LGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGL 286 (466)
T ss_dssp GG--GGGCTTCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTC
T ss_pred cc--ccccCCCCEEECCCCCccc--chhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCC
Confidence 55 7778889999998865543 344555 788888998888886655 7788888888888888886544 7888
Q ss_pred CCCCEEeccCCcCCCcCChhhhcCCCEEEeecCcCcccCC
Q 003737 330 AKTNFMYLTGNKLTGPVPKYIFNSNKNVDISLNNFTWESS 369 (799)
Q Consensus 330 ~~L~~L~L~~N~l~g~~p~~~~~~l~~l~ls~N~~~g~~p 369 (799)
++|+.|++++|++++..|-.-...++.|++++|++++..|
T Consensus 287 ~~L~~L~L~~n~l~~~~~~~~l~~L~~L~L~~n~l~~~~~ 326 (466)
T 1o6v_A 287 TALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP 326 (466)
T ss_dssp TTCSEEECCSSCCSCCGGGGGCTTCSEEECCSSCCSCCGG
T ss_pred CccCeEEcCCCcccCchhhcCCCCCCEEECcCCcCCCchh
Confidence 8888888888888876554445678888888888887665
No 56
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.94 E-value=2.2e-25 Score=253.45 Aligned_cols=257 Identities=25% Similarity=0.354 Sum_probs=218.4
Q ss_pred ccEEEEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEEEe
Q 003737 92 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLSI 170 (799)
Q Consensus 92 ~~v~~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L 170 (799)
.+++.|++.++.++. +| .+..+++|++|+|++|.+++..+ +..++ |++|++++|.+++..| ++++++|++|++
T Consensus 46 ~~l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L 119 (466)
T 1o6v_A 46 DQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTL 119 (466)
T ss_dssp HTCCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEEC
T ss_pred ccccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEEC
Confidence 578999999999884 55 48899999999999999998766 77777 9999999999997655 999999999999
Q ss_pred eCCcCCCCCCccccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccCCcCCCcCCccccCCCCCCEEEccCCCCCCC
Q 003737 171 EGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGP 250 (799)
Q Consensus 171 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 250 (799)
++|.+++. +. +.++++|++|++++|.+++ ++ .+..+++|++|+++ |.+.+.. .+.++++|++|++++|.+++.
T Consensus 120 ~~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l~~~ 192 (466)
T 1o6v_A 120 FNNQITDI-DP-LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNKVSDI 192 (466)
T ss_dssp CSSCCCCC-GG-GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSCCCCC
T ss_pred CCCCCCCC-hH-HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEeecC-CcccCch--hhccCCCCCEEECcCCcCCCC
Confidence 99999864 33 9999999999999999985 44 48999999999997 5565433 389999999999999999864
Q ss_pred CchhhhcCCCCCeEEcCCCCCCCCCCCccCC-CCccEEEccCCcCcccCCccccCCCCCCeeccccccCCCCCchhhhcc
Q 003737 251 IPASISALTSLTDLRISDLKGSESAFPKLDK-MNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKL 329 (799)
Q Consensus 251 ~p~~~~~l~~L~~L~L~~n~~~~~~~~~l~~-~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l 329 (799)
..+..+++|++|++++|.... ..+ +.. .+|+.|++++|.+++. ..+..+++|+.|++++|++++..| +..+
T Consensus 193 --~~l~~l~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l 264 (466)
T 1o6v_A 193 --SVLAKLTNLESLIATNNQISD-ITP-LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGL 264 (466)
T ss_dssp --GGGGGCTTCSEEECCSSCCCC-CGG-GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTC
T ss_pred --hhhccCCCCCEEEecCCcccc-ccc-ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcC
Confidence 358899999999999965543 223 444 7899999999999864 468889999999999999997665 8999
Q ss_pred CCCCEEeccCCcCCCcCChhhhcCCCEEEeecCcCcccCC
Q 003737 330 AKTNFMYLTGNKLTGPVPKYIFNSNKNVDISLNNFTWESS 369 (799)
Q Consensus 330 ~~L~~L~L~~N~l~g~~p~~~~~~l~~l~ls~N~~~g~~p 369 (799)
++|+.|++++|++++..|-.-...++.|++++|.+++..|
T Consensus 265 ~~L~~L~l~~n~l~~~~~~~~l~~L~~L~L~~n~l~~~~~ 304 (466)
T 1o6v_A 265 TKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISP 304 (466)
T ss_dssp TTCSEEECCSSCCCCCGGGTTCTTCSEEECCSSCCSCCGG
T ss_pred CCCCEEECCCCccCccccccCCCccCeEEcCCCcccCchh
Confidence 9999999999999976553335678999999999998655
No 57
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.93 E-value=5.5e-26 Score=240.91 Aligned_cols=236 Identities=17% Similarity=0.172 Sum_probs=194.6
Q ss_pred cccEEEEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCc-CcCcCCcccCCCCCCCEE
Q 003737 91 TCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNR-LSGPFPKVLTNITTLKNL 168 (799)
Q Consensus 91 ~~~v~~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~-l~~~~p~~~~~L~~L~~L 168 (799)
..+++.|+++++.+++..+..|..+++|++|+|++|.+++..|..|..++ |++|++++|. ++...|..|..+++|++|
T Consensus 31 ~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L 110 (285)
T 1ozn_A 31 PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110 (285)
T ss_dssp CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEE
T ss_pred CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEE
Confidence 45799999999999988888899999999999999999999899999887 9999999997 887779999999999999
Q ss_pred EeeCCcCCCCCCccccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccCCcCCCcCCccccCCCCCCEEEccCCCCC
Q 003737 169 SIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLE 248 (799)
Q Consensus 169 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 248 (799)
++++|.+++..|..|.++++|++|++++|++++..+..|..+++|++|++++|++++..+..|..+++|++|+|++|.++
T Consensus 111 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 190 (285)
T 1ozn_A 111 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVA 190 (285)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC
T ss_pred ECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCccc
Confidence 99999999888889999999999999999999777777999999999999999999777778999999999999999999
Q ss_pred CCCchhhhcCCCCCeEEcCCCCCCCCCCCccCCCCccEEEccCCcCcccCCccccCCCCCCeeccccccCCCCCchhhhc
Q 003737 249 GPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEK 328 (799)
Q Consensus 249 ~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~l~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~ 328 (799)
+..|..+..+++|+.|++++ |.+++..+..+..+++|+.|++++|.+....+.. ..
T Consensus 191 ~~~~~~~~~l~~L~~L~l~~-----------------------n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~-~~ 246 (285)
T 1ozn_A 191 HVHPHAFRDLGRLMTLYLFA-----------------------NNLSALPTEALAPLRALQYLRLNDNPWVCDCRAR-PL 246 (285)
T ss_dssp EECTTTTTTCTTCCEEECCS-----------------------SCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGH-HH
T ss_pred ccCHhHccCcccccEeeCCC-----------------------CcCCcCCHHHcccCcccCEEeccCCCccCCCCcH-HH
Confidence 88888888777766665554 5555444455666777777777777776433321 11
Q ss_pred cCCCCEEeccCCcCCCcCChhh
Q 003737 329 LAKTNFMYLTGNKLTGPVPKYI 350 (799)
Q Consensus 329 l~~L~~L~L~~N~l~g~~p~~~ 350 (799)
...++.+..+.+.+....|..+
T Consensus 247 ~~~l~~~~~~~~~~~c~~p~~l 268 (285)
T 1ozn_A 247 WAWLQKFRGSSSEVPCSLPQRL 268 (285)
T ss_dssp HHHHHHCCSEECCCBEEESGGG
T ss_pred HHHHHhcccccCccccCCchHh
Confidence 1223334456666666666554
No 58
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.93 E-value=7.2e-25 Score=247.95 Aligned_cols=251 Identities=19% Similarity=0.111 Sum_probs=208.8
Q ss_pred ccEEEEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEEEe
Q 003737 92 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLSI 170 (799)
Q Consensus 92 ~~v~~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L 170 (799)
.+++.|+|++|++++. | ++.+++|++|+|++|.+++. + ++.++ |++|++++|++++. | ++.+++|++|++
T Consensus 64 ~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~l-~--~~~l~~L~~L~l 134 (457)
T 3bz5_A 64 TGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTKL-D--VSQNPLLTYLNC 134 (457)
T ss_dssp TTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSCC-C--CTTCTTCCEEEC
T ss_pred CCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCee-c--CCCCCcCCEEEC
Confidence 5799999999999974 4 89999999999999999986 3 77776 99999999999974 4 899999999999
Q ss_pred eCCcCCCCCCccccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccCCcCCCcCCccccCCCCCCEEEccCCCCCCC
Q 003737 171 EGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGP 250 (799)
Q Consensus 171 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 250 (799)
++|++++. + ++.+++|++|++++|+..+.+ .+..+++|++|++++|++++ +| ++.+++|++|++++|++++.
T Consensus 135 ~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~ 206 (457)
T 3bz5_A 135 ARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL 206 (457)
T ss_dssp TTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC
T ss_pred CCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee
Confidence 99999874 3 889999999999999766666 47889999999999999986 45 88899999999999999875
Q ss_pred CchhhhcCCCCCeEEcCCCCCCCCCCCccCC-CCccEEEccCCcCcccCCccccCCC-------CCCeeccccccCCCCC
Q 003737 251 IPASISALTSLTDLRISDLKGSESAFPKLDK-MNLKTLILTKCLIHGEIPDYIGDMT-------KLKNIDLSFNNLTGGI 322 (799)
Q Consensus 251 ~p~~~~~l~~L~~L~L~~n~~~~~~~~~l~~-~~L~~L~L~~N~l~~~~p~~l~~l~-------~L~~L~Ls~N~l~~~~ 322 (799)
.+..+++|+.|++++|.... +| +.. ++|+.|++++|++++..+..+.+++ +|+.|++++|.+.+.+
T Consensus 207 ---~l~~l~~L~~L~Ls~N~l~~--ip-~~~l~~L~~L~l~~N~l~~~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~ 280 (457)
T 3bz5_A 207 ---DLNQNIQLTFLDCSSNKLTE--ID-VTPLTQLTYFDCSVNPLTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYF 280 (457)
T ss_dssp ---CCTTCTTCSEEECCSSCCSC--CC-CTTCTTCSEEECCSSCCSCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEE
T ss_pred ---ccccCCCCCEEECcCCcccc--cC-ccccCCCCEEEeeCCcCCCcCHHHCCCCCEEeccCCCCCEEECCCCccCCcc
Confidence 38889999999999976655 45 444 7899999999999987666666555 6678888888888777
Q ss_pred chhhhccCCCCEEeccCCcCCCcCChhh----------hcCCCEEEeecCcCccc
Q 003737 323 PTTFEKLAKTNFMYLTGNKLTGPVPKYI----------FNSNKNVDISLNNFTWE 367 (799)
Q Consensus 323 p~~~~~l~~L~~L~L~~N~l~g~~p~~~----------~~~l~~l~ls~N~~~g~ 367 (799)
| ++.+++|+.|++++|.+.+.+|... ...++.|++++|++++.
T Consensus 281 ~--~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~~N~l~~l 333 (457)
T 3bz5_A 281 Q--AEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTELTEL 333 (457)
T ss_dssp E--CTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCCCSCC
T ss_pred c--ccccccCCEEECCCCcccceeccCCCcceEechhhcccCCEEECCCCccccc
Confidence 7 5678899999999998888776432 13567899999999884
No 59
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.93 E-value=4.1e-27 Score=253.71 Aligned_cols=264 Identities=17% Similarity=0.137 Sum_probs=214.3
Q ss_pred cEEEEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEEEee
Q 003737 93 HVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLSIE 171 (799)
Q Consensus 93 ~v~~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls 171 (799)
+....+++.+++...+...+..+++|++|+|++|.+++..|..|..++ |++|+|++|.+++..| +..+++|++|+|+
T Consensus 11 ~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls 88 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLN 88 (317)
T ss_dssp EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECC
T ss_pred ceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECc
Confidence 466667888888766666677788999999999999999888999887 9999999999987665 8999999999999
Q ss_pred CCcCCCCCCccccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccCCcCCCcCCccccCCCCCCEEEccCCCCCCCC
Q 003737 172 GNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPI 251 (799)
Q Consensus 172 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 251 (799)
+|.+++. ...++|++|++++|++++..+. .+++|++|++++|++++..+..++.+++|++|+|++|.+++..
T Consensus 89 ~n~l~~l-----~~~~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 160 (317)
T 3o53_A 89 NNYVQEL-----LVGPSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVN 160 (317)
T ss_dssp SSEEEEE-----EECTTCCEEECCSSCCSEEEEC---CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEE
T ss_pred CCccccc-----cCCCCcCEEECCCCccCCcCcc---ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCccc
Confidence 9998742 2448999999999999865544 3678999999999999888889999999999999999999877
Q ss_pred chhh-hcCCCCCeEEcCCCCCCCCCCCccC-CCCccEEEccCCcCcccCCccccCCCCCCeeccccccCCCCCchhhhcc
Q 003737 252 PASI-SALTSLTDLRISDLKGSESAFPKLD-KMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKL 329 (799)
Q Consensus 252 p~~~-~~l~~L~~L~L~~n~~~~~~~~~l~-~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l 329 (799)
+..+ ..+++|++|++++|.+... +... ..+|+.|+|++|++++. |..+..+++|+.|+|++|+++ .+|..+..+
T Consensus 161 ~~~~~~~l~~L~~L~L~~N~l~~~--~~~~~l~~L~~L~Ls~N~l~~l-~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l 236 (317)
T 3o53_A 161 FAELAASSDTLEHLNLQYNFIYDV--KGQVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLV-LIEKALRFS 236 (317)
T ss_dssp GGGGGGGTTTCCEEECTTSCCCEE--ECCCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCC-EECTTCCCC
T ss_pred HHHHhhccCcCCEEECCCCcCccc--ccccccccCCEEECCCCcCCcc-hhhhcccCcccEEECcCCccc-chhhHhhcC
Confidence 7776 4789999999998665433 3322 37899999999999864 445888999999999999999 578888899
Q ss_pred CCCCEEeccCCcCC-CcCChhhhc--CCCEEEee-cCcCcccCCC
Q 003737 330 AKTNFMYLTGNKLT-GPVPKYIFN--SNKNVDIS-LNNFTWESSD 370 (799)
Q Consensus 330 ~~L~~L~L~~N~l~-g~~p~~~~~--~l~~l~ls-~N~~~g~~p~ 370 (799)
++|+.|++++|+++ +.+|..+.. .++.++++ .+.++|..|.
T Consensus 237 ~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~ 281 (317)
T 3o53_A 237 QNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEE 281 (317)
T ss_dssp TTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSC
T ss_pred CCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCchh
Confidence 99999999999998 555655433 35677777 4456555543
No 60
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=4.2e-25 Score=232.91 Aligned_cols=227 Identities=20% Similarity=0.245 Sum_probs=180.7
Q ss_pred EeCCCCCcccCCccccCCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEEEeeCCcCC
Q 003737 98 ALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFT 176 (799)
Q Consensus 98 ~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~ 176 (799)
+..+.+++ .+|..+. ++|++|+|++|++++..+..|..++ |++|++++|++++..+..|.++++|++|+|++|.++
T Consensus 13 ~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 89 (276)
T 2z62_A 13 QCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ 89 (276)
T ss_dssp ECTTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCC
T ss_pred EecCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccC
Confidence 33444454 5666554 5799999999999988877888877 999999999998877788889999999999999998
Q ss_pred CCCCccccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccCCcCCCc-CCccccCCCCCCEEEccCCCCCCCCchhh
Q 003737 177 GSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGK-IPEFIGKWKKIQKLHIQGSSLEGPIPASI 255 (799)
Q Consensus 177 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 255 (799)
+..+..|.++++|++|++++|.+++..+..+..+++|++|++++|++++. +|..|..+++|++|+|++|++++..+..+
T Consensus 90 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 169 (276)
T 2z62_A 90 SLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDL 169 (276)
T ss_dssp EECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGG
T ss_pred ccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHh
Confidence 77778888999999999999998876666788899999999999998763 58888889999999999998887777777
Q ss_pred hcCCCCCeEEcCCCCCCCCCCCccCCCCccEEEccCCcCcccCCccccCCCCCCeeccccccCCCCCchhhhccCCCCEE
Q 003737 256 SALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFM 335 (799)
Q Consensus 256 ~~l~~L~~L~L~~n~~~~~~~~~l~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 335 (799)
..+++|+.|++ .|++++|.+++..+..+. ..+|+.|+|++|++++..+..|..+++|+.|
T Consensus 170 ~~l~~L~~l~l-------------------~L~ls~n~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 229 (276)
T 2z62_A 170 RVLHQMPLLNL-------------------SLDLSLNPMNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKI 229 (276)
T ss_dssp HHHHTCTTCCE-------------------EEECCSSCCCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEE
T ss_pred hhhhhccccce-------------------eeecCCCcccccCccccC-CCcccEEECCCCceeecCHhHhcccccccEE
Confidence 76666553221 567777888765555444 3489999999999997777778889999999
Q ss_pred eccCCcCCCcCC
Q 003737 336 YLTGNKLTGPVP 347 (799)
Q Consensus 336 ~L~~N~l~g~~p 347 (799)
++++|++++..|
T Consensus 230 ~l~~N~~~c~c~ 241 (276)
T 2z62_A 230 WLHTNPWDCSCP 241 (276)
T ss_dssp ECCSSCBCCCTT
T ss_pred EccCCcccccCC
Confidence 999998886544
No 61
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.92 E-value=3.5e-25 Score=250.34 Aligned_cols=246 Identities=20% Similarity=0.254 Sum_probs=139.0
Q ss_pred ccEEEEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCcCcccccccc-e-------------eEEEccCCcCcCcCCc
Q 003737 92 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQ-L-------------VELSVMGNRLSGPFPK 157 (799)
Q Consensus 92 ~~v~~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L-------------~~L~Ls~N~l~~~~p~ 157 (799)
.++++|+++++++ |.+|++++++++|++|++++|.+.|.+|..++.+. | ++|++++|.+++ +|.
T Consensus 11 ~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-lp~ 88 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-LPE 88 (454)
T ss_dssp ------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-CCS
T ss_pred ccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-CCC
Confidence 5788899999998 78999999999999999999999888888887765 4 788888888875 333
Q ss_pred ccCCCCCCCEEEeeCCcCCCCCCccccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccCCcCCCcCCccccCCCCC
Q 003737 158 VLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKI 237 (799)
Q Consensus 158 ~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 237 (799)
. .++|++|++++|.+++ +|.. +++|++|++++|++++ +|.. .++|++|++++|++++ +| .|+++++|
T Consensus 89 ~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L 155 (454)
T 1jl5_A 89 L---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFL 155 (454)
T ss_dssp C---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTC
T ss_pred C---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCC
Confidence 2 3677788888877775 5543 3566677777666663 2221 1466666666666664 45 46666666
Q ss_pred CEEEccCCCCCCCCchhhhcCCCCCeEEcCCCCCCCCCCCccCC-CCccEEEccCCcCcccCCccccCCCCCCeeccccc
Q 003737 238 QKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDK-MNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFN 316 (799)
Q Consensus 238 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~l~~-~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N 316 (799)
++|++++|++++ +|..+ .+|++|++++|.... +|.+.. .+|+.|++++|++++ +|... ++|++|++++|
T Consensus 156 ~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~--l~~~~~l~~L~~L~l~~N~l~~-l~~~~---~~L~~L~l~~n 225 (454)
T 1jl5_A 156 KIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE--LPELQNLPFLTAIYADNNSLKK-LPDLP---LSLESIVAGNN 225 (454)
T ss_dssp CEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS--CCCCTTCTTCCEEECCSSCCSS-CCCCC---TTCCEEECCSS
T ss_pred CEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc--CccccCCCCCCEEECCCCcCCc-CCCCc---CcccEEECcCC
Confidence 666666666664 34322 366666666644332 344444 566666666666664 33322 35666666666
Q ss_pred cCCCCCchhhhccCCCCEEeccCCcCCCcCChhhhcCCCEEEeecCcCcc
Q 003737 317 NLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIFNSNKNVDISLNNFTW 366 (799)
Q Consensus 317 ~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~l~~l~ls~N~~~g 366 (799)
+++ .+|. +..+++|+.|++++|++++ +|. ....++.|++++|.+++
T Consensus 226 ~l~-~lp~-~~~l~~L~~L~l~~N~l~~-l~~-~~~~L~~L~l~~N~l~~ 271 (454)
T 1jl5_A 226 ILE-ELPE-LQNLPFLTTIYADNNLLKT-LPD-LPPSLEALNVRDNYLTD 271 (454)
T ss_dssp CCS-SCCC-CTTCTTCCEEECCSSCCSS-CCS-CCTTCCEEECCSSCCSC
T ss_pred cCC-cccc-cCCCCCCCEEECCCCcCCc-ccc-cccccCEEECCCCcccc
Confidence 666 4552 6666666666666666664 343 22455666666666655
No 62
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.92 E-value=2.5e-24 Score=243.30 Aligned_cols=245 Identities=22% Similarity=0.328 Sum_probs=140.4
Q ss_pred cEEEEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCcCcccccccceeEEEccCCcCcCcCCcccCCCCCCCEEEeeC
Q 003737 93 HVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQLVELSVMGNRLSGPFPKVLTNITTLKNLSIEG 172 (799)
Q Consensus 93 ~v~~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~ 172 (799)
++++|++++|.+++ +| +|.++++|++|++++|++++ +|..+ .+|++|++++|++++ +| .++++++|++|++++
T Consensus 132 ~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~--~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~ 204 (454)
T 1jl5_A 132 LLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP--PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADN 204 (454)
T ss_dssp TCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC--TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCS
T ss_pred CCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc--ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCC
Confidence 45555555555553 44 35555555555555555554 22221 135555555555554 33 355555555555555
Q ss_pred CcCCCCCCccccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccCCcCCCcCCccccCCCCCCEEEccCCCCCCCCc
Q 003737 173 NLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIP 252 (799)
Q Consensus 173 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 252 (799)
|.+++ +|... ++|++|++++|.++ .+|. +..+++|++|++++|++++ +|.. +++|++|++++|++++ +|
T Consensus 205 N~l~~-l~~~~---~~L~~L~l~~n~l~-~lp~-~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~ 273 (454)
T 1jl5_A 205 NSLKK-LPDLP---LSLESIVAGNNILE-ELPE-LQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LP 273 (454)
T ss_dssp SCCSS-CCCCC---TTCCEEECCSSCCS-SCCC-CTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CC
T ss_pred CcCCc-CCCCc---CcccEEECcCCcCC-cccc-cCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cC
Confidence 55553 33221 35555555555555 4442 5555555666665555553 3322 2455555555555554 33
Q ss_pred hhhhcCCCCCeEEcCCCCCCCCCCCccCCCCccEEEccCCcCcccCCccccCC-CCCCeeccccccCCCCCchhhhccCC
Q 003737 253 ASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDM-TKLKNIDLSFNNLTGGIPTTFEKLAK 331 (799)
Q Consensus 253 ~~~~~l~~L~~L~L~~n~~~~~~~~~l~~~~L~~L~L~~N~l~~~~p~~l~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~ 331 (799)
.. +++|+.|++++|.... +|.+. .+|+.|++++|++++. + .+ ++|+.|++++|++++ +|.. +++
T Consensus 274 ~~---~~~L~~L~ls~N~l~~--l~~~~-~~L~~L~l~~N~l~~i-~----~~~~~L~~L~Ls~N~l~~-lp~~---~~~ 338 (454)
T 1jl5_A 274 EL---PQSLTFLDVSENIFSG--LSELP-PNLYYLNASSNEIRSL-C----DLPPSLEELNVSNNKLIE-LPAL---PPR 338 (454)
T ss_dssp CC---CTTCCEEECCSSCCSE--ESCCC-TTCCEEECCSSCCSEE-C----CCCTTCCEEECCSSCCSC-CCCC---CTT
T ss_pred cc---cCcCCEEECcCCccCc--ccCcC-CcCCEEECcCCcCCcc-c----CCcCcCCEEECCCCcccc-cccc---CCc
Confidence 22 2456666666543322 11110 3566666666666541 1 23 588999999999986 5654 588
Q ss_pred CCEEeccCCcCCCcCChhhhcCCCEEEeecCcCcc--cCCCCC
Q 003737 332 TNFMYLTGNKLTGPVPKYIFNSNKNVDISLNNFTW--ESSDPI 372 (799)
Q Consensus 332 L~~L~L~~N~l~g~~p~~~~~~l~~l~ls~N~~~g--~~p~~~ 372 (799)
|+.|++++|+++ .+|. ....++.|++++|++++ .+|..+
T Consensus 339 L~~L~L~~N~l~-~lp~-~l~~L~~L~L~~N~l~~l~~ip~~l 379 (454)
T 1jl5_A 339 LERLIASFNHLA-EVPE-LPQNLKQLHVEYNPLREFPDIPESV 379 (454)
T ss_dssp CCEEECCSSCCS-CCCC-CCTTCCEEECCSSCCSSCCCCCTTC
T ss_pred CCEEECCCCccc-cccc-hhhhccEEECCCCCCCcCCCChHHH
Confidence 999999999998 4776 56788999999999998 677665
No 63
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.92 E-value=1.5e-24 Score=228.07 Aligned_cols=212 Identities=24% Similarity=0.324 Sum_probs=122.8
Q ss_pred CCeEecCCCCcccEEEEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCcCcCcCCccc
Q 003737 81 SNVTCDCSSATCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNRLSGPFPKVL 159 (799)
Q Consensus 81 ~gv~c~~~~~~~~v~~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~ 159 (799)
.|+.|.|. .+++.+++++++++ .+|..+. ++|++|+|++|++++..+..|..++ |++|++++|.++...+..|
T Consensus 8 ~~~~C~c~---~~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~ 81 (270)
T 2o6q_A 8 DGGVCSCN---NNKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIF 81 (270)
T ss_dssp GTCSBEEE---TTTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTT
T ss_pred CCCCCEeC---CCCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhh
Confidence 67778764 34667888888888 4665543 5677777777766655444444443 5555555554443333334
Q ss_pred CCCCCCCEEEeeCCcCCCCCCccccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccCCcCCCcCCccccCCCCCCE
Q 003737 160 TNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQK 239 (799)
Q Consensus 160 ~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 239 (799)
. ++++|++|++++|++++..+..|..+++|++|++++|++++..+..|..+++|++
T Consensus 82 ~------------------------~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 137 (270)
T 2o6q_A 82 K------------------------ELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTY 137 (270)
T ss_dssp S------------------------SCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred c------------------------CCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCE
Confidence 4 4455555555555544433344445555555555555555444444555555555
Q ss_pred EEccCCCCCCCCchhhhcCCCCCeEEcCCCCCCCCCCCccCCCCccEEEccCCcCcccCCccccCCCCCCeeccccccCC
Q 003737 240 LHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLT 319 (799)
Q Consensus 240 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~l~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 319 (799)
|+|++|.+++..+..|..+++|++|+ |++|.+++..+..|..+++|+.|+|++|+++
T Consensus 138 L~Ls~n~l~~~~~~~~~~l~~L~~L~-----------------------L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 194 (270)
T 2o6q_A 138 LSLGYNELQSLPKGVFDKLTSLKELR-----------------------LYNNQLKRVPEGAFDKLTELKTLKLDNNQLK 194 (270)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEE-----------------------CCSSCCSCCCTTTTTTCTTCCEEECCSSCCS
T ss_pred EECCCCcCCccCHhHccCCcccceeE-----------------------ecCCcCcEeChhHhccCCCcCEEECCCCcCC
Confidence 55555555544443444444333333 3334444444445666777777777778777
Q ss_pred CCCchhhhccCCCCEEeccCCcCCCc
Q 003737 320 GGIPTTFEKLAKTNFMYLTGNKLTGP 345 (799)
Q Consensus 320 ~~~p~~~~~l~~L~~L~L~~N~l~g~ 345 (799)
+..+..|..+++|+.|+|++|++...
T Consensus 195 ~~~~~~~~~l~~L~~L~l~~N~~~c~ 220 (270)
T 2o6q_A 195 RVPEGAFDSLEKLKMLQLQENPWDCT 220 (270)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCBCCS
T ss_pred cCCHHHhccccCCCEEEecCCCeeCC
Confidence 66666677788888888888887654
No 64
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.92 E-value=2.2e-25 Score=254.38 Aligned_cols=216 Identities=19% Similarity=0.146 Sum_probs=147.4
Q ss_pred CCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEEEeeCCcCCCCCCccccCCCCCCEE
Q 003737 114 KLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKL 192 (799)
Q Consensus 114 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 192 (799)
.+++|++|+|++|.+++.+|..|..++ |++|+|++|.+++..| +..+++|++|+|++|.+++.. ..++|++|
T Consensus 32 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~-----~~~~L~~L 104 (487)
T 3oja_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIETL 104 (487)
T ss_dssp TGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEE-----ECTTCCEE
T ss_pred cCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCC-----CCCCcCEE
Confidence 334788888888888888788888777 8888888888887665 888888888888888887432 23788888
Q ss_pred EcccCcCCccCChhccCCCCCCEEEccCCcCCCcCCccccCCCCCCEEEccCCCCCCCCchhhh-cCCCCCeEEcCCCCC
Q 003737 193 ILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASIS-ALTSLTDLRISDLKG 271 (799)
Q Consensus 193 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~~n~~ 271 (799)
++++|.+++..+. .+++|++|+|++|.+++..|..|+.+++|++|+|++|.+++.+|..+. .+++|+.|+|++|.+
T Consensus 105 ~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l 181 (487)
T 3oja_A 105 HAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFI 181 (487)
T ss_dssp ECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCC
T ss_pred ECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCcc
Confidence 8888888865543 357788888888888888888888888888888888888887777765 677777777666443
Q ss_pred CCCCCCccC-CCCccEEEccCCcCcccCCccccCCCCCCeeccccccCCCCCchhhhccCCCCEEeccCCcCC
Q 003737 272 SESAFPKLD-KMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLT 343 (799)
Q Consensus 272 ~~~~~~~l~-~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 343 (799)
... +... .++|+.|+|++|.+++..| .+..+++|+.|+|++|++++ +|..+..+++|+.|++++|.++
T Consensus 182 ~~~--~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~ 250 (487)
T 3oja_A 182 YDV--KGQVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFH 250 (487)
T ss_dssp CEE--ECCCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBC
T ss_pred ccc--cccccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCc
Confidence 221 2111 2445555555555554322 24555555555555555553 4444555555555555555554
No 65
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.91 E-value=8e-26 Score=243.59 Aligned_cols=244 Identities=17% Similarity=0.145 Sum_probs=209.4
Q ss_pred ccEEEEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEEEe
Q 003737 92 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLSI 170 (799)
Q Consensus 92 ~~v~~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L 170 (799)
.++++|+|++|.+++..|..|..+++|++|+|++|.+++.++ +..++ |++|++++|++++.. ..++|++|++
T Consensus 34 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~-----~~~~L~~L~l 106 (317)
T 3o53_A 34 WNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIETLHA 106 (317)
T ss_dssp GGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEE-----ECTTCCEEEC
T ss_pred CCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCcccccc-----CCCCcCEEEC
Confidence 479999999999998888899999999999999999998765 77777 999999999998543 3489999999
Q ss_pred eCCcCCCCCCccccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccCCcCCCcCCccc-cCCCCCCEEEccCCCCCC
Q 003737 171 EGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFI-GKWKKIQKLHIQGSSLEG 249 (799)
Q Consensus 171 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~ 249 (799)
++|++++..+. .+++|++|++++|++++..+..+..+++|++|++++|.+++..+..+ ..+++|++|+|++|.+++
T Consensus 107 ~~n~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~ 183 (317)
T 3o53_A 107 ANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYD 183 (317)
T ss_dssp CSSCCSEEEEC---CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCE
T ss_pred CCCccCCcCcc---ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCcc
Confidence 99999865443 46889999999999998878889999999999999999998877777 479999999999999986
Q ss_pred CCchhhhcCCCCCeEEcCCCCCCCCCCCccCC-CCccEEEccCCcCcccCCccccCCCCCCeeccccccCC-CCCchhhh
Q 003737 250 PIPASISALTSLTDLRISDLKGSESAFPKLDK-MNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLT-GGIPTTFE 327 (799)
Q Consensus 250 ~~p~~~~~l~~L~~L~L~~n~~~~~~~~~l~~-~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~-~~~p~~~~ 327 (799)
. +. ...+++|++|++++|.+.. ..+.+.. ++|+.|+|++|.++ .+|..+..+++|+.|++++|.++ +.+|..+.
T Consensus 184 ~-~~-~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~ 259 (317)
T 3o53_A 184 V-KG-QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFS 259 (317)
T ss_dssp E-EC-CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHH
T ss_pred c-cc-ccccccCCEEECCCCcCCc-chhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHh
Confidence 5 32 3358999999999966543 3334555 89999999999999 57888999999999999999999 78889999
Q ss_pred ccCCCCEEecc-CCcCCCcCChh
Q 003737 328 KLAKTNFMYLT-GNKLTGPVPKY 349 (799)
Q Consensus 328 ~l~~L~~L~L~-~N~l~g~~p~~ 349 (799)
.+++|+.|++. .+.++|..|..
T Consensus 260 ~~~~L~~l~l~~~~~l~~~~~~~ 282 (317)
T 3o53_A 260 KNQRVQTVAKQTVKKLTGQNEEE 282 (317)
T ss_dssp TCHHHHHHHHHHHHHHHSSSSCC
T ss_pred ccccceEEECCCchhccCCchhc
Confidence 99999999998 45666665543
No 66
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.91 E-value=3.8e-25 Score=252.39 Aligned_cols=234 Identities=16% Similarity=0.134 Sum_probs=203.7
Q ss_pred cccEEEEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEEE
Q 003737 91 TCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLS 169 (799)
Q Consensus 91 ~~~v~~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~ 169 (799)
..+++.|+|++|.+++..|..|..+++|++|+|++|.+++.+| +..++ |++|+|++|.+++..+ .++|++|+
T Consensus 33 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~ 105 (487)
T 3oja_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLH 105 (487)
T ss_dssp GGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEE
T ss_pred CCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEE
Confidence 3489999999999999888999999999999999999998776 77777 9999999999986443 38999999
Q ss_pred eeCCcCCCCCCccccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccCCcCCCcCCcccc-CCCCCCEEEccCCCCC
Q 003737 170 IEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIG-KWKKIQKLHIQGSSLE 248 (799)
Q Consensus 170 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~ 248 (799)
+++|.+++..+. .+++|++|+|++|.+++..|..+..+++|++|+|++|.+++..|..+. .+++|++|+|++|.++
T Consensus 106 L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~ 182 (487)
T 3oja_A 106 AANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY 182 (487)
T ss_dssp CCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCC
T ss_pred CcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccc
Confidence 999999976554 468999999999999998899999999999999999999998888886 7999999999999999
Q ss_pred CCCchhhhcCCCCCeEEcCCCCCCCCCCCccCC-CCccEEEccCCcCcccCCccccCCCCCCeeccccccCC-CCCchhh
Q 003737 249 GPIPASISALTSLTDLRISDLKGSESAFPKLDK-MNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLT-GGIPTTF 326 (799)
Q Consensus 249 ~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~l~~-~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~-~~~p~~~ 326 (799)
+..+ +..+++|+.|++++|.+. +..|.+.. ++|+.|+|++|.+++ +|..+..+++|+.|++++|.+. +.+|..+
T Consensus 183 ~~~~--~~~l~~L~~L~Ls~N~l~-~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~ 258 (487)
T 3oja_A 183 DVKG--QVVFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFF 258 (487)
T ss_dssp EEEC--CCCCTTCCEEECCSSCCC-EECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHH
T ss_pred cccc--cccCCCCCEEECCCCCCC-CCCHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHH
Confidence 7632 346999999999996654 44445655 899999999999996 7888999999999999999998 7778888
Q ss_pred hccCCCCEEecc
Q 003737 327 EKLAKTNFMYLT 338 (799)
Q Consensus 327 ~~l~~L~~L~L~ 338 (799)
..++.|+.+++.
T Consensus 259 ~~l~~L~~l~~~ 270 (487)
T 3oja_A 259 SKNQRVQTVAKQ 270 (487)
T ss_dssp TTCHHHHHHHHH
T ss_pred HhCCCCcEEecc
Confidence 888777777665
No 67
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.91 E-value=8.8e-24 Score=222.78 Aligned_cols=208 Identities=20% Similarity=0.220 Sum_probs=182.3
Q ss_pred ccEEEEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEEEe
Q 003737 92 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLSI 170 (799)
Q Consensus 92 ~~v~~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L 170 (799)
.+++.|++++|++++..+..|.++++|++|+|++|.+++..+..|..++ |++|+|++|.+++..+..|.++++|++|++
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 4699999999999988888999999999999999999998888899887 999999999999988899999999999999
Q ss_pred eCCcCCCCCCccccCCCCCCEEEcccCcCCc-cCChhccCCCCCCEEEccCCcCCCcCCccccCCCCCC----EEEccCC
Q 003737 171 EGNLFTGSIPPDIRKLINLQKLILSSNSFTG-ELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQ----KLHIQGS 245 (799)
Q Consensus 171 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~----~L~L~~N 245 (799)
++|.+++..+..+..+++|++|++++|.+++ .+|..+.++++|++|++++|++++..+..+..+++|+ +|++++|
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n 187 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSS
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCC
Confidence 9999998777789999999999999999986 3699999999999999999999988888887777777 8889998
Q ss_pred CCCCCCchhhhcCCCCCeEEcCCCCCCCCCCCccCCCCccEEEccCCcCcccCCccccCCCCCCeeccccccCCCCCc
Q 003737 246 SLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIP 323 (799)
Q Consensus 246 ~l~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~l~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p 323 (799)
.+++..+..+. ..+|+.|+|++|++++..+..+..+++|+.|+|++|.+++..|
T Consensus 188 ~l~~~~~~~~~------------------------~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 188 PMNFIQPGAFK------------------------EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp CCCEECTTSSC------------------------SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred cccccCccccC------------------------CCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 88754433222 1257778888888887777778899999999999999996543
No 68
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.91 E-value=4e-24 Score=249.28 Aligned_cols=233 Identities=27% Similarity=0.355 Sum_probs=140.6
Q ss_pred cEEEEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEEEee
Q 003737 93 HVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLSIE 171 (799)
Q Consensus 93 ~v~~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls 171 (799)
.++.|++++++++ .+|..+. ++|++|+|++|.++..++ .++ |++|+|++|+|++ +|. .+++|++|+|+
T Consensus 41 ~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~~lp~----~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls 109 (622)
T 3g06_A 41 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTSLPA----LPPELRTLEVSGNQLTS-LPV---LPPGLLELSIF 109 (622)
T ss_dssp CCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCSCCCC----CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEEC
T ss_pred CCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCCCCCC----cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEECc
Confidence 4778888888888 6777665 788888888888885433 234 8888888888874 554 66788888888
Q ss_pred CCcCCCCCCccccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccCCcCCCcCCccccCCCCCCEEEccCCCCCCCC
Q 003737 172 GNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPI 251 (799)
Q Consensus 172 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 251 (799)
+|.+++ +|. .+++|++|++++|++++ +|.. +++|++|++++|++++ +|.. +++|+.|++++|.+++ +
T Consensus 110 ~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~~-l 176 (622)
T 3g06_A 110 SNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS-LPAL---PSELCKLWAYNNQLTS-L 176 (622)
T ss_dssp SCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-C
T ss_pred CCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCC-cCCc---cCCCCEEECCCCCCCC-C
Confidence 888874 444 56778888888888774 5543 3778888888888774 3432 3456666666666664 3
Q ss_pred chhhhcCCCCCeEEcCCCCCCCCCCCccCCCCccEEEccCCcCcccCCccccCCCCCCeeccccccCCCCCchhhhccCC
Q 003737 252 PASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAK 331 (799)
Q Consensus 252 p~~~~~l~~L~~L~L~~n~~~~~~~~~l~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 331 (799)
| ..+++|+.|++++|.+.. +|.. ..+|+.|++++|.++ .+|.. +++|+.|+|++|+|++ +| ..+++
T Consensus 177 ~---~~~~~L~~L~Ls~N~l~~--l~~~-~~~L~~L~L~~N~l~-~l~~~---~~~L~~L~Ls~N~L~~-lp---~~l~~ 242 (622)
T 3g06_A 177 P---MLPSGLQELSVSDNQLAS--LPTL-PSELYKLWAYNNRLT-SLPAL---PSGLKELIVSGNRLTS-LP---VLPSE 242 (622)
T ss_dssp C---CCCTTCCEEECCSSCCSC--CCCC-CTTCCEEECCSSCCS-SCCCC---CTTCCEEECCSSCCSC-CC---CCCTT
T ss_pred c---ccCCCCcEEECCCCCCCC--CCCc-cchhhEEECcCCccc-ccCCC---CCCCCEEEccCCccCc-CC---CCCCc
Confidence 3 335566666666644332 2211 134555555555554 22221 2445555555555553 33 23344
Q ss_pred CCEEeccCCcCCCcCChhhhcCCCEEEeecCcCc
Q 003737 332 TNFMYLTGNKLTGPVPKYIFNSNKNVDISLNNFT 365 (799)
Q Consensus 332 L~~L~L~~N~l~g~~p~~~~~~l~~l~ls~N~~~ 365 (799)
|+.|+|++|+|+ .+|. ....++.|+|++|+++
T Consensus 243 L~~L~Ls~N~L~-~lp~-~~~~L~~L~Ls~N~L~ 274 (622)
T 3g06_A 243 LKELMVSGNRLT-SLPM-LPSGLLSLSVYRNQLT 274 (622)
T ss_dssp CCEEECCSSCCS-CCCC-CCTTCCEEECCSSCCC
T ss_pred CcEEECCCCCCC-cCCc-ccccCcEEeCCCCCCC
Confidence 555555555554 2333 3334455555555554
No 69
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.90 E-value=1.9e-22 Score=211.97 Aligned_cols=199 Identities=20% Similarity=0.249 Sum_probs=158.2
Q ss_pred eeEEEccCCcCcCcCCcccCCCCCCCEEEeeCCcCCCCCCccccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccC
Q 003737 141 LVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISD 220 (799)
Q Consensus 141 L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 220 (799)
.+++++++++++ .+|..+. ++|++|+|++|++++..+..|.++++|++|++++|.++...+..|.++++|++|++++
T Consensus 18 ~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~ 94 (270)
T 2o6q_A 18 KNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTD 94 (270)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCS
T ss_pred CCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCC
Confidence 345555666655 3554443 5788888888888876666888899999999999998865566678899999999999
Q ss_pred CcCCCcCCccccCCCCCCEEEccCCCCCCCCchhhhcCCCCCeEEcCCCCCCCCCCCccCCCCccEEEccCCcCcccCCc
Q 003737 221 NNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPD 300 (799)
Q Consensus 221 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~l~~~~L~~L~L~~N~l~~~~p~ 300 (799)
|++++..+..|..+++|++|+|++|.+++..+..|..+++|++ |+|++|.+++..+.
T Consensus 95 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~-----------------------L~Ls~n~l~~~~~~ 151 (270)
T 2o6q_A 95 NKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTY-----------------------LSLGYNELQSLPKG 151 (270)
T ss_dssp SCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCE-----------------------EECCSSCCCCCCTT
T ss_pred CcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCE-----------------------EECCCCcCCccCHh
Confidence 9998777778888999999999999988777766666665555 55556666666666
Q ss_pred cccCCCCCCeeccccccCCCCCchhhhccCCCCEEeccCCcCCCcCChhhh--cCCCEEEeecCcCc
Q 003737 301 YIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIF--NSNKNVDISLNNFT 365 (799)
Q Consensus 301 ~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~--~~l~~l~ls~N~~~ 365 (799)
.+..+++|+.|+|++|++++..+..|..+++|+.|+|++|++++..+..+. ..++.|+|++|.+.
T Consensus 152 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 218 (270)
T 2o6q_A 152 VFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWD 218 (270)
T ss_dssp TTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred HccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCee
Confidence 788999999999999999988888899999999999999999964444342 46889999999875
No 70
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.90 E-value=1.6e-23 Score=220.36 Aligned_cols=200 Identities=19% Similarity=0.292 Sum_probs=135.9
Q ss_pred eeEEEccCCcCcCcCCcccCCCCCCCEEEeeCCcCCCCCCccccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccC
Q 003737 141 LVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISD 220 (799)
Q Consensus 141 L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 220 (799)
|++|++++|.++. + ..+..+++|++|+|++|.+++ + +.+..+++|++|++++|.+++..+..|.++++|++|++++
T Consensus 43 L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 118 (272)
T 3rfs_A 43 IDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVE 118 (272)
T ss_dssp CCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred eeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCC
Confidence 5556666655542 1 235555566666666665553 1 3455555566666665555554444455555555555555
Q ss_pred CcCCCcCCccccCCCCCCEEEccCCCCCCCCchhhhcCCCCCeEEcCCCCCCCCCCCccCCCCccEEEccCCcCcccCCc
Q 003737 221 NNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPD 300 (799)
Q Consensus 221 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~l~~~~L~~L~L~~N~l~~~~p~ 300 (799)
|++++..+..|+.+++|++|+|++|++++..+..+..+ .+|+.|++++|++++..+.
T Consensus 119 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l-----------------------~~L~~L~l~~n~l~~~~~~ 175 (272)
T 3rfs_A 119 NQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKL-----------------------TNLTELDLSYNQLQSLPEG 175 (272)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC-----------------------TTCCEEECCSSCCCCCCTT
T ss_pred CcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccC-----------------------ccCCEEECCCCCcCccCHH
Confidence 55555555555555555555555555554444444443 4566667777888877777
Q ss_pred cccCCCCCCeeccccccCCCCCchhhhccCCCCEEeccCCcCCCcCChhhhcCCCEEEeecCcCcccCCCCC
Q 003737 301 YIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIFNSNKNVDISLNNFTWESSDPI 372 (799)
Q Consensus 301 ~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~l~~l~ls~N~~~g~~p~~~ 372 (799)
.+..+++|+.|++++|++++..|..|..+++|+.|++++|++++..| .++.++++.|.++|.+|..+
T Consensus 176 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~-----~l~~l~~~~n~~~g~ip~~~ 242 (272)
T 3rfs_A 176 VFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP-----GIRYLSEWINKHSGVVRNSA 242 (272)
T ss_dssp TTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT-----TTHHHHHHHHHTGGGBBCTT
T ss_pred HhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccCc-----HHHHHHHHHHhCCCcccCcc
Confidence 78899999999999999999888889999999999999999998766 46788899999999999775
No 71
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.89 E-value=1.8e-22 Score=214.29 Aligned_cols=204 Identities=22% Similarity=0.193 Sum_probs=125.9
Q ss_pred cccCCCCCCEEEccCCcCCCcCcccccccceeEEEccCCcCcCcCCcccCCCCCCCEEEeeCCcCCCCCCccccCCCCCC
Q 003737 111 ELSKLRYLKQLDLSRNCLTGSFSPQWASLQLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQ 190 (799)
Q Consensus 111 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 190 (799)
.+.++++++++++++|.++..++. +. -.+++|+|++|.+++..|..|..+++|++|+|++|.+++. +. ...+++|+
T Consensus 5 ~~~~l~~l~~l~~~~~~l~~ip~~-~~-~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~-~~~l~~L~ 80 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLTALPPD-LP-KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKL-QV-DGTLPVLG 80 (290)
T ss_dssp EEECSTTCCEEECTTSCCSSCCSC-CC-TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEE-EC-CSCCTTCC
T ss_pred cccccCCccEEECCCCCCCcCCCC-CC-CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcc-cC-CCCCCcCC
Confidence 356667777777777777644332 21 1366777777777766667777777777777777777643 22 25677777
Q ss_pred EEEcccCcCCccCChhccCCCCCCEEEccCCcCCCcCCccccCCCCCCEEEccCCCCCCCCchhhhcCCCCCeEEcCCCC
Q 003737 191 KLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLK 270 (799)
Q Consensus 191 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~ 270 (799)
+|++++|+++ .+|..+..+++|++|++++|++++..|..|..+++|++|+|++|++++..+..|..+++|+
T Consensus 81 ~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~-------- 151 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLE-------- 151 (290)
T ss_dssp EEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCC--------
T ss_pred EEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCC--------
Confidence 7777777776 5666667777777777777777766666677777777777777766654444444443333
Q ss_pred CCCCCCCccCCCCccEEEccCCcCcccCCccccCCCCCCeeccccccCCCCCchhhhccCCCCEEeccCCcCC
Q 003737 271 GSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLT 343 (799)
Q Consensus 271 ~~~~~~~~l~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 343 (799)
.|+|++|++++..+..+..+++|+.|+|++|+++ .+|..+..+++|+.|+|++|++.
T Consensus 152 ---------------~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 152 ---------------KLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp ---------------EEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred ---------------EEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCcc
Confidence 3333344444333444555666666666666666 45555555556666666666554
No 72
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.89 E-value=1.3e-22 Score=213.41 Aligned_cols=205 Identities=22% Similarity=0.236 Sum_probs=138.0
Q ss_pred ccCCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEEEeeCCcCCCCCCccccCCCCCC
Q 003737 112 LSKLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQ 190 (799)
Q Consensus 112 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 190 (799)
+..+++|+.|++++|.++.. ..+..++ |++|++++|.+++. ..+..+++|++|+|++|.+++..+..|.++++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 112 (272)
T 3rfs_A 37 QNELNSIDQIIANNSDIKSV--QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLK 112 (272)
T ss_dssp HHHHTTCCEEECTTSCCCCC--TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCC
T ss_pred cccccceeeeeeCCCCcccc--cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCC
Confidence 45566777777777776643 2345555 77777777777652 3677777777777777777766666677777788
Q ss_pred EEEcccCcCCccCChhccCCCCCCEEEccCCcCCCcCCccccCCCCCCEEEccCCCCCCCCchhhhcCCCCCeEEcCCCC
Q 003737 191 KLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLK 270 (799)
Q Consensus 191 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~ 270 (799)
+|++++|++++..+..|..+++|++|++++|++++..+..|+.+++|++|++++|++++..+..+..+++|+.|+
T Consensus 113 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~----- 187 (272)
T 3rfs_A 113 ELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLR----- 187 (272)
T ss_dssp EEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE-----
T ss_pred EEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEE-----
Confidence 888887777766666677777788888888877766666677777888888888877766555555555544444
Q ss_pred CCCCCCCccCCCCccEEEccCCcCcccCCccccCCCCCCeeccccccCCCCCchhhhccCCCCEEeccCCcCCCcCChhh
Q 003737 271 GSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYI 350 (799)
Q Consensus 271 ~~~~~~~~l~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~ 350 (799)
+++|.+++..|..+..+++|+.|++++|.+.+. +++|+.|+++.|+++|.+|..+
T Consensus 188 ------------------L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~ 242 (272)
T 3rfs_A 188 ------------------LYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSA 242 (272)
T ss_dssp ------------------CCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTT
T ss_pred ------------------CCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCcc
Confidence 444555555555566666666666666666643 3356666666777777666543
No 73
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.89 E-value=2.2e-25 Score=252.75 Aligned_cols=275 Identities=19% Similarity=0.225 Sum_probs=208.0
Q ss_pred cEEEEEeCCCCCcc----cCCccccCCCCCCEEEccCCcCCCcCcccccc-----c-ceeEEEccCCcCcCc----CCcc
Q 003737 93 HVVTIALKAQNLTG----TLPTELSKLRYLKQLDLSRNCLTGSFSPQWAS-----L-QLVELSVMGNRLSGP----FPKV 158 (799)
Q Consensus 93 ~v~~L~L~~~~l~g----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-----l-~L~~L~Ls~N~l~~~----~p~~ 158 (799)
++++|+|++|.++. .++..+..+++|++|+|++|.+++..+..+.. . +|++|++++|++++. ++..
T Consensus 86 ~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 165 (461)
T 1z7x_W 86 KIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASV 165 (461)
T ss_dssp CCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHH
T ss_pred ceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHH
Confidence 68899999998883 56888889999999999999887654443322 2 399999999988864 3566
Q ss_pred cCCCCCCCEEEeeCCcCCCCCCcccc-----CCCCCCEEEcccCcCCcc----CChhccCCCCCCEEEccCCcCCCcC--
Q 003737 159 LTNITTLKNLSIEGNLFTGSIPPDIR-----KLINLQKLILSSNSFTGE----LPAELTKLTNLNDLRISDNNFSGKI-- 227 (799)
Q Consensus 159 ~~~L~~L~~L~Ls~N~l~~~~p~~~~-----~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~-- 227 (799)
+..+++|++|+|++|.++...+..+. .+++|++|++++|.++.. ++..+..+++|++|++++|.++...
T Consensus 166 l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~ 245 (461)
T 1z7x_W 166 LRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMA 245 (461)
T ss_dssp HHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHH
T ss_pred HhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHH
Confidence 67788999999999988654343343 366899999999988863 5777888899999999999887532
Q ss_pred ---CccccCCCCCCEEEccCCCCCCC----CchhhhcCCCCCeEEcCCCCCCCCCCCc----cC-C-CCccEEEccCCcC
Q 003737 228 ---PEFIGKWKKIQKLHIQGSSLEGP----IPASISALTSLTDLRISDLKGSESAFPK----LD-K-MNLKTLILTKCLI 294 (799)
Q Consensus 228 ---p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~n~~~~~~~~~----l~-~-~~L~~L~L~~N~l 294 (799)
+..+..+++|++|++++|.++.. ++..+..+++|++|++++|......... +. . ++|+.|++++|.+
T Consensus 246 ~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l 325 (461)
T 1z7x_W 246 ELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSF 325 (461)
T ss_dssp HHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCC
T ss_pred HHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCC
Confidence 33334688999999999988864 5777888899999999986543221111 11 1 4899999999998
Q ss_pred ccc----CCccccCCCCCCeeccccccCCCCCchhhhc-----cCCCCEEeccCCcCCC----cCChhhh--cCCCEEEe
Q 003737 295 HGE----IPDYIGDMTKLKNIDLSFNNLTGGIPTTFEK-----LAKTNFMYLTGNKLTG----PVPKYIF--NSNKNVDI 359 (799)
Q Consensus 295 ~~~----~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~L~~N~l~g----~~p~~~~--~~l~~l~l 359 (799)
++. ++..+..+++|++|+|++|++++..+..+.. .++|+.|++++|++++ .+|..+. +.++.||+
T Consensus 326 ~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l 405 (461)
T 1z7x_W 326 TAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDL 405 (461)
T ss_dssp BGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEEC
T ss_pred chHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEEC
Confidence 865 4666777899999999999988766665553 6789999999999986 6666653 57889999
Q ss_pred ecCcCccc
Q 003737 360 SLNNFTWE 367 (799)
Q Consensus 360 s~N~~~g~ 367 (799)
++|++++.
T Consensus 406 ~~N~i~~~ 413 (461)
T 1z7x_W 406 SNNCLGDA 413 (461)
T ss_dssp CSSSCCHH
T ss_pred CCCCCCHH
Confidence 99988754
No 74
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.88 E-value=2.2e-22 Score=215.87 Aligned_cols=222 Identities=19% Similarity=0.228 Sum_probs=138.4
Q ss_pred CCCCEEEccCCcCCCcC----cccccccceeEEEccCCcCcCcCCccc--CCCCCCCEEEeeCCcCCCCCC----ccccC
Q 003737 116 RYLKQLDLSRNCLTGSF----SPQWASLQLVELSVMGNRLSGPFPKVL--TNITTLKNLSIEGNLFTGSIP----PDIRK 185 (799)
Q Consensus 116 ~~L~~L~Ls~N~l~~~~----p~~~~~l~L~~L~Ls~N~l~~~~p~~~--~~L~~L~~L~Ls~N~l~~~~p----~~~~~ 185 (799)
..++.|.+.++.+.... ...+...+|++|++++|.+++..|..+ ..+++|++|+|++|.+++..+ ..+..
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~ 143 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWL 143 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTB
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhh
Confidence 34677777777665321 111112238888888888887777777 778888888888888876555 33456
Q ss_pred CCCCCEEEcccCcCCccCChhccCCCCCCEEEccCCcCCCc--C--CccccCCCCCCEEEccCCCCCCCCch----hhhc
Q 003737 186 LINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGK--I--PEFIGKWKKIQKLHIQGSSLEGPIPA----SISA 257 (799)
Q Consensus 186 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~--p~~~~~l~~L~~L~L~~N~l~~~~p~----~~~~ 257 (799)
+++|++|+|++|++++..|..|..+++|++|+|++|++.+. + +..++.+++|++|+|++|+++. ++. .+.+
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~ 222 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAA 222 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHH
T ss_pred ccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhc
Confidence 77888888888888777777777888888888888876542 1 2234667778888888887763 222 2456
Q ss_pred CCCCCeEEcCCCCCCCCCCCccCC----CCccEEEccCCcCcccCCccccCCCCCCeeccccccCCCCCchhhhccCCCC
Q 003737 258 LTSLTDLRISDLKGSESAFPKLDK----MNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTN 333 (799)
Q Consensus 258 l~~L~~L~L~~n~~~~~~~~~l~~----~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 333 (799)
+++|++|++++|.+.....+.+.. ++|++|+|++|+++ .+|..+. ++|+.|+|++|++++. |. +..+++|+
T Consensus 223 l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~ 297 (310)
T 4glp_A 223 GVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVD 297 (310)
T ss_dssp TCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCS
T ss_pred CCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCcc
Confidence 677777777664443321111221 35666666666665 4454443 5666666666666643 22 45556666
Q ss_pred EEeccCCcCC
Q 003737 334 FMYLTGNKLT 343 (799)
Q Consensus 334 ~L~L~~N~l~ 343 (799)
.|+|++|+++
T Consensus 298 ~L~L~~N~l~ 307 (310)
T 4glp_A 298 NLTLDGNPFL 307 (310)
T ss_dssp CEECSSTTTS
T ss_pred EEECcCCCCC
Confidence 6666666655
No 75
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.88 E-value=1.2e-23 Score=228.13 Aligned_cols=253 Identities=18% Similarity=0.272 Sum_probs=156.0
Q ss_pred cEEEEEeCCCCCcccCCccccCC--CCCCEEEccCCcCCCcCcccccccceeEEEccCCcCcCc-CCcccCCCCCCCEEE
Q 003737 93 HVVTIALKAQNLTGTLPTELSKL--RYLKQLDLSRNCLTGSFSPQWASLQLVELSVMGNRLSGP-FPKVLTNITTLKNLS 169 (799)
Q Consensus 93 ~v~~L~L~~~~l~g~~p~~~~~l--~~L~~L~Ls~N~l~~~~p~~~~~l~L~~L~Ls~N~l~~~-~p~~~~~L~~L~~L~ 169 (799)
.++.++++++.+. +..+..+ ++++.|++++|.+.+.++..+...+|++|++++|.+++. +|..+..+++|++|+
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~ 124 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLS 124 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEE
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchhhccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEe
Confidence 4567777777665 3445555 677777777777776655543322366666666666544 555566666666666
Q ss_pred eeCCcCCCCCCccccCCCCCCEEEcccC-cCCc-cCChhccCCCCCCEEEccCC-cCCCc-CCccccCCC-CCCEEEccC
Q 003737 170 IEGNLFTGSIPPDIRKLINLQKLILSSN-SFTG-ELPAELTKLTNLNDLRISDN-NFSGK-IPEFIGKWK-KIQKLHIQG 244 (799)
Q Consensus 170 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N-~l~~-~~p~~~~~l~~L~~L~Ls~N-~l~~~-~p~~~~~l~-~L~~L~L~~ 244 (799)
|++|.+++..|..+..+++|++|++++| .+++ .++..+..+++|++|++++| .+++. ++..+..++ +|++|++++
T Consensus 125 L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~ 204 (336)
T 2ast_B 125 LEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSG 204 (336)
T ss_dssp CTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCS
T ss_pred CcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCC
Confidence 6666655555555556666666666666 4543 24444555566666666666 55532 344455555 555555555
Q ss_pred C--CCC-CCCchhhhcCCCCCeEEcCCCCCCCCCCCccCCCCccEEEccCCc-CcccCCccccCCCCCCeecccccc-CC
Q 003737 245 S--SLE-GPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCL-IHGEIPDYIGDMTKLKNIDLSFNN-LT 319 (799)
Q Consensus 245 N--~l~-~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~l~~~~L~~L~L~~N~-l~~~~p~~l~~l~~L~~L~Ls~N~-l~ 319 (799)
| .++ +.+|..+..++ +|+.|++++|. +++..+..+..+++|++|++++|. ++
T Consensus 205 ~~~~~~~~~l~~~~~~~~-----------------------~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~ 261 (336)
T 2ast_B 205 YRKNLQKSDLSTLVRRCP-----------------------NLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDII 261 (336)
T ss_dssp CGGGSCHHHHHHHHHHCT-----------------------TCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCC
T ss_pred CcccCCHHHHHHHHhhCC-----------------------CCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCC
Confidence 5 333 23344444444 45555666666 555666677888899999999985 33
Q ss_pred CCCchhhhccCCCCEEeccCCcCCCcCChhhhcCCCEEEeecCcCcccCCCCC
Q 003737 320 GGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIFNSNKNVDISLNNFTWESSDPI 372 (799)
Q Consensus 320 ~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~l~~l~ls~N~~~g~~p~~~ 372 (799)
......+..+++|+.|++++| ++...-..+...++.|+++.|++++..|..+
T Consensus 262 ~~~~~~l~~~~~L~~L~l~~~-i~~~~~~~l~~~l~~L~l~~n~l~~~~~~~~ 313 (336)
T 2ast_B 262 PETLLELGEIPTLKTLQVFGI-VPDGTLQLLKEALPHLQINCSHFTTIARPTI 313 (336)
T ss_dssp GGGGGGGGGCTTCCEEECTTS-SCTTCHHHHHHHSTTSEESCCCSCCTTCSSC
T ss_pred HHHHHHHhcCCCCCEEeccCc-cCHHHHHHHHhhCcceEEecccCccccCCcc
Confidence 222235788999999999988 4432222334457888899999998888765
No 76
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.88 E-value=5.6e-22 Score=205.96 Aligned_cols=181 Identities=20% Similarity=0.278 Sum_probs=153.3
Q ss_pred CCeEecCCCCcccEEEEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCcCcCcCCccc
Q 003737 81 SNVTCDCSSATCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNRLSGPFPKVL 159 (799)
Q Consensus 81 ~gv~c~~~~~~~~v~~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~ 159 (799)
.|++|. ...+.+++++++++ .+|..+. +.|+.|+|++|.+++..+..|..++ |++|+|++|.+++..|..|
T Consensus 8 ~gC~C~-----~~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 79 (251)
T 3m19_A 8 TGCTCN-----EGKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVF 79 (251)
T ss_dssp HSSEEE-----GGGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTT
T ss_pred CceEcC-----CCCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHh
Confidence 567774 23457899999998 6776665 6899999999999998888888887 9999999999998888889
Q ss_pred CCCCCCCEEEeeCCcCCCCCCccccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccCCcCCCcCCccccCCCCCCE
Q 003737 160 TNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQK 239 (799)
Q Consensus 160 ~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 239 (799)
.++++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|+.+++|++
T Consensus 80 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 159 (251)
T 3m19_A 80 DDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQT 159 (251)
T ss_dssp TTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred ccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCE
Confidence 99999999999999999777778889999999999999999766677888999999999999999777778899999999
Q ss_pred EEccCCCCCCCCchhhhcCCCCCeEEcCCC
Q 003737 240 LHIQGSSLEGPIPASISALTSLTDLRISDL 269 (799)
Q Consensus 240 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n 269 (799)
|+|++|++++..+..+..+++|+.|++++|
T Consensus 160 L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N 189 (251)
T 3m19_A 160 LSLSTNQLQSVPHGAFDRLGKLQTITLFGN 189 (251)
T ss_dssp EECCSSCCSCCCTTTTTTCTTCCEEECCSC
T ss_pred EECCCCcCCccCHHHHhCCCCCCEEEeeCC
Confidence 999999998777777777777766666653
No 77
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.87 E-value=1.4e-21 Score=207.53 Aligned_cols=200 Identities=22% Similarity=0.199 Sum_probs=172.6
Q ss_pred cccEEEEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEEE
Q 003737 91 TCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLS 169 (799)
Q Consensus 91 ~~~v~~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~ 169 (799)
..+++++++++++++ .+|..+. +.+++|+|++|.+++..+..|..++ |++|+|++|.+++..+. +.+++|++|+
T Consensus 9 l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~~L~ 83 (290)
T 1p9a_G 9 VASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLGTLD 83 (290)
T ss_dssp STTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCCEEE
T ss_pred cCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCCEEE
Confidence 357899999999998 6776664 7999999999999999999999987 99999999999965443 7899999999
Q ss_pred eeCCcCCCCCCccccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccCCcCCCcCCccccCCCCCCEEEccCCCCCC
Q 003737 170 IEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEG 249 (799)
Q Consensus 170 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 249 (799)
|++|.++ .+|..+..+++|++|++++|++++..|..|..+++|++|+|++|++++..+..|..+++|+.|+|++|+++.
T Consensus 84 Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 162 (290)
T 1p9a_G 84 LSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTE 162 (290)
T ss_dssp CCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSC
T ss_pred CCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCc
Confidence 9999998 788899999999999999999998777889999999999999999998888889999999999999999997
Q ss_pred CCchhhhcCCCCCeEEcCCCCCCCCCCCccCCCCccEEEccCCcCcccCCccccCCCCCCeeccccccCCC
Q 003737 250 PIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTG 320 (799)
Q Consensus 250 ~~p~~~~~l~~L~~L~L~~n~~~~~~~~~l~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 320 (799)
..+..|..+++|+.|+++ +|+++ .+|..+..+++|+.|+|++|.+..
T Consensus 163 l~~~~~~~l~~L~~L~L~-----------------------~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C 209 (290)
T 1p9a_G 163 LPAGLLNGLENLDTLLLQ-----------------------ENSLY-TIPKGFFGSHLLPFAFLHGNPWLC 209 (290)
T ss_dssp CCTTTTTTCTTCCEEECC-----------------------SSCCC-CCCTTTTTTCCCSEEECCSCCBCC
T ss_pred cCHHHhcCcCCCCEEECC-----------------------CCcCC-ccChhhcccccCCeEEeCCCCccC
Confidence 666666767766665555 45555 566677777888899999888874
No 78
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.87 E-value=7.5e-22 Score=203.37 Aligned_cols=202 Identities=17% Similarity=0.206 Sum_probs=125.6
Q ss_pred cCCccccCCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCc-CcCcCCcccCCCCCCCEEEeeC-CcCCCCCCccc
Q 003737 107 TLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNR-LSGPFPKVLTNITTLKNLSIEG-NLFTGSIPPDI 183 (799)
Q Consensus 107 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~-l~~~~p~~~~~L~~L~~L~Ls~-N~l~~~~p~~~ 183 (799)
.+|. +. ++|++|+|++|++++..+..|..++ |++|++++|+ +++..+..|.++++|++|++++ |.+++..+..|
T Consensus 25 ~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f 101 (239)
T 2xwt_C 25 RIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDAL 101 (239)
T ss_dssp SCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSE
T ss_pred ccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHh
Confidence 5565 33 3788888888888776666666665 7777777775 6655555666777777777776 66665555566
Q ss_pred cCCCCCCEEEcccCcCCccCChhccCCCCCC---EEEccCC-cCCCcCCccccCCCCCC-EEEccCCCCCCCCchhhhcC
Q 003737 184 RKLINLQKLILSSNSFTGELPAELTKLTNLN---DLRISDN-NFSGKIPEFIGKWKKIQ-KLHIQGSSLEGPIPASISAL 258 (799)
Q Consensus 184 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~---~L~Ls~N-~l~~~~p~~~~~l~~L~-~L~L~~N~l~~~~p~~~~~l 258 (799)
.++++|++|++++|++++ +|. |..+++|+ +|++++| ++++..+..|..+++|+ +|++++|+++ .+|...
T Consensus 102 ~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~--- 175 (239)
T 2xwt_C 102 KELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYA--- 175 (239)
T ss_dssp ECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTT---
T ss_pred CCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhh---
Confidence 667777777777776664 554 66666666 6666666 66655555566666666 6666666655 222211
Q ss_pred CCCCeEEcCCCCCCCCCCCccCCCCccEEEccCCc-CcccCCccccCC-CCCCeeccccccCCCCCchhhhccCCCCEEe
Q 003737 259 TSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCL-IHGEIPDYIGDM-TKLKNIDLSFNNLTGGIPTTFEKLAKTNFMY 336 (799)
Q Consensus 259 ~~L~~L~L~~n~~~~~~~~~l~~~~L~~L~L~~N~-l~~~~p~~l~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 336 (799)
+...+|+.|+|++|+ +++..+..|..+ ++|+.|++++|++++ +|.. .+++|+.|+
T Consensus 176 --------------------~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~-l~~~--~~~~L~~L~ 232 (239)
T 2xwt_C 176 --------------------FNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA-LPSK--GLEHLKELI 232 (239)
T ss_dssp --------------------TTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCC-CCCT--TCTTCSEEE
T ss_pred --------------------cCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCcccc-CChh--HhccCceee
Confidence 111245566666663 665555566666 777777777777764 3332 456666666
Q ss_pred ccCC
Q 003737 337 LTGN 340 (799)
Q Consensus 337 L~~N 340 (799)
++++
T Consensus 233 l~~~ 236 (239)
T 2xwt_C 233 ARNT 236 (239)
T ss_dssp CTTC
T ss_pred ccCc
Confidence 6654
No 79
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.87 E-value=2.4e-24 Score=244.29 Aligned_cols=274 Identities=19% Similarity=0.225 Sum_probs=125.4
Q ss_pred cEEEEEeCCCCCcc----cCCccccCCCCCCEEEccCCcCCCcCccccc-cc-----ceeEEEccCCcCcC----cCCcc
Q 003737 93 HVVTIALKAQNLTG----TLPTELSKLRYLKQLDLSRNCLTGSFSPQWA-SL-----QLVELSVMGNRLSG----PFPKV 158 (799)
Q Consensus 93 ~v~~L~L~~~~l~g----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l-----~L~~L~Ls~N~l~~----~~p~~ 158 (799)
+++.|+|+++.++. .++..+..+++|++|+|++|.+.+..+..+. .+ +|++|+|++|+++. .+|..
T Consensus 29 ~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~ 108 (461)
T 1z7x_W 29 QCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSST 108 (461)
T ss_dssp TCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHH
T ss_pred CccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHHH
Confidence 34555555555543 2344445555555555555555433222111 11 25555555555542 33455
Q ss_pred cCCCCCCCEEEeeCCcCCCCCCccc-----cCCCCCCEEEcccCcCCcc----CChhccCCCCCCEEEccCCcCCCcCCc
Q 003737 159 LTNITTLKNLSIEGNLFTGSIPPDI-----RKLINLQKLILSSNSFTGE----LPAELTKLTNLNDLRISDNNFSGKIPE 229 (799)
Q Consensus 159 ~~~L~~L~~L~Ls~N~l~~~~p~~~-----~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 229 (799)
+..+++|++|+|++|.+++..+..+ ...++|++|++++|++++. ++..+..+++|++|++++|.++...+.
T Consensus 109 l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~ 188 (461)
T 1z7x_W 109 LRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVR 188 (461)
T ss_dssp TTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHH
T ss_pred HccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHH
Confidence 5555555555555555443222211 1233455555555555532 233344455555555555555433222
Q ss_pred ccc-----CCCCCCEEEccCCCCCCC----CchhhhcCCCCCeEEcCCCCCCCCCC----CccC--CCCccEEEccCCcC
Q 003737 230 FIG-----KWKKIQKLHIQGSSLEGP----IPASISALTSLTDLRISDLKGSESAF----PKLD--KMNLKTLILTKCLI 294 (799)
Q Consensus 230 ~~~-----~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~n~~~~~~~----~~l~--~~~L~~L~L~~N~l 294 (799)
.+. ..++|++|+|++|.++.. ++..+..+++|++|++++|......+ +.+. ..+|+.|++++|.+
T Consensus 189 ~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l 268 (461)
T 1z7x_W 189 VLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGI 268 (461)
T ss_dssp HHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCC
T ss_pred HHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCC
Confidence 222 134555555555555542 34444555555555555543322111 1111 14555555555555
Q ss_pred ccc----CCccccCCCCCCeeccccccCCCCCchhhhcc-----CCCCEEeccCCcCCCc----CChhhh--cCCCEEEe
Q 003737 295 HGE----IPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKL-----AKTNFMYLTGNKLTGP----VPKYIF--NSNKNVDI 359 (799)
Q Consensus 295 ~~~----~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~g~----~p~~~~--~~l~~l~l 359 (799)
+.. ++..+..+++|++|++++|.+++..+..+... ++|+.|++++|.+++. +|..+. ..++.||+
T Consensus 269 ~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L 348 (461)
T 1z7x_W 269 TAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQI 348 (461)
T ss_dssp CHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEEC
T ss_pred CHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEc
Confidence 532 34444445555555555555544333333322 4555555555555543 122211 34555555
Q ss_pred ecCcCcc
Q 003737 360 SLNNFTW 366 (799)
Q Consensus 360 s~N~~~g 366 (799)
++|.+++
T Consensus 349 s~n~i~~ 355 (461)
T 1z7x_W 349 SNNRLED 355 (461)
T ss_dssp CSSBCHH
T ss_pred cCCcccc
Confidence 5555543
No 80
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.87 E-value=1.6e-21 Score=202.57 Aligned_cols=209 Identities=22% Similarity=0.275 Sum_probs=127.3
Q ss_pred eeEEEccCCcCcCcCCcccCCCCCCCEEEeeCCcCCCCCCccccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccC
Q 003737 141 LVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISD 220 (799)
Q Consensus 141 L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 220 (799)
.++++++++.++ .+|..+. ++|+.|+|++|.+++..+..|.++++|++|+|++|.+++..|..|..+++|++|+|++
T Consensus 16 ~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 92 (251)
T 3m19_A 16 KKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLAN 92 (251)
T ss_dssp GTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred CeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCC
Confidence 344555555554 3444333 4566666666666665555666666666666666666665566666666666667666
Q ss_pred CcCCCcCCccccCCCCCCEEEccCCCCCCCCchhhhcCCCCCeEEcCCCCCCCCCCCccCCCCccEEEccCCcCcccCCc
Q 003737 221 NNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPD 300 (799)
Q Consensus 221 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~l~~~~L~~L~L~~N~l~~~~p~ 300 (799)
|++++..+..|..+++|++|+|++|++++..+..|..+++| +.|+|++|++++..+.
T Consensus 93 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L-----------------------~~L~Ls~N~l~~~~~~ 149 (251)
T 3m19_A 93 NQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKL-----------------------KELRLNTNQLQSIPAG 149 (251)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC-----------------------CEEECCSSCCCCCCTT
T ss_pred CcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcc-----------------------cEEECcCCcCCccCHH
Confidence 66666555666666677777777776665544444444443 4444555566655556
Q ss_pred cccCCCCCCeeccccccCCCCCchhhhccCCCCEEeccCCcCCCcCCh------hhhc-CCCEEEeecCcCcccCCCCCc
Q 003737 301 YIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPK------YIFN-SNKNVDISLNNFTWESSDPIE 373 (799)
Q Consensus 301 ~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~------~~~~-~l~~l~ls~N~~~g~~p~~~~ 373 (799)
.+..+++|+.|+|++|++++..+..|..+++|+.|+|++|++++..+. ++.. ..+..+..+|.+.+..+ ...
T Consensus 150 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 228 (251)
T 3m19_A 150 AFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCSRCEILYLSQWIRENSNKVKDGTGQNLHESPD-GVT 228 (251)
T ss_dssp TTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTTSTTHHHHHHHHHHSGGGBCC-------CCGG-GCB
T ss_pred HcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCCccccHHHHHHHHhcccceeeccCcccccCCC-cCc
Confidence 677888888888888888877777888888899999999988876332 2221 22344555666654433 233
Q ss_pred CCC
Q 003737 374 CPR 376 (799)
Q Consensus 374 ~~~ 376 (799)
|..
T Consensus 229 C~~ 231 (251)
T 3m19_A 229 CSD 231 (251)
T ss_dssp BTT
T ss_pred cCC
Confidence 543
No 81
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.87 E-value=4.6e-24 Score=231.46 Aligned_cols=233 Identities=19% Similarity=0.231 Sum_probs=183.4
Q ss_pred ccEEEEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCc-Ccccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEEE
Q 003737 92 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGS-FSPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLS 169 (799)
Q Consensus 92 ~~v~~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~ 169 (799)
.+++.++++++.+.+..+. +..+++|++|+|++|.+++. ++..+..++ |++|++++|.+++..|..++.+++|++|+
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 5789999999999987665 66899999999999999876 788888887 99999999999988999999999999999
Q ss_pred eeCC-cCCC-CCCccccCCCCCCEEEcccC-cCCcc-CChhccCCC-CCCEEEccCC--cCC-CcCCccccCCCCCCEEE
Q 003737 170 IEGN-LFTG-SIPPDIRKLINLQKLILSSN-SFTGE-LPAELTKLT-NLNDLRISDN--NFS-GKIPEFIGKWKKIQKLH 241 (799)
Q Consensus 170 Ls~N-~l~~-~~p~~~~~l~~L~~L~Ls~N-~l~~~-~p~~~~~l~-~L~~L~Ls~N--~l~-~~~p~~~~~l~~L~~L~ 241 (799)
|++| .+++ .++..+..+++|++|++++| .+++. ++..+..++ +|++|++++| .++ +.+|..+..+++|++|+
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~ 228 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLD 228 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEE
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEe
Confidence 9999 6765 36667889999999999999 99864 677889999 9999999999 555 46778888999999999
Q ss_pred ccCCC-CCCCCchhhhcCCCCCeEEcCCCCCCCCCCCccCCCCccEEEccCCcCcccCCccccCCCCCCeeccccccCCC
Q 003737 242 IQGSS-LEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTG 320 (799)
Q Consensus 242 L~~N~-l~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~l~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 320 (799)
+++|. +++..+..+..+++|+.|++++|.... ......+..+++|+.|++++| ++.
T Consensus 229 l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~----------------------~~~~~~l~~~~~L~~L~l~~~-i~~ 285 (336)
T 2ast_B 229 LSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDII----------------------PETLLELGEIPTLKTLQVFGI-VPD 285 (336)
T ss_dssp CTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCC----------------------GGGGGGGGGCTTCCEEECTTS-SCT
T ss_pred CCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCC----------------------HHHHHHHhcCCCCCEEeccCc-cCH
Confidence 99999 777778888888888888887753111 011123455677777777777 332
Q ss_pred CCchhhhcc-CCCCEEeccCCcCCCcCChhhh
Q 003737 321 GIPTTFEKL-AKTNFMYLTGNKLTGPVPKYIF 351 (799)
Q Consensus 321 ~~p~~~~~l-~~L~~L~L~~N~l~g~~p~~~~ 351 (799)
. .+..+ ..++.|++++|++++..|..+.
T Consensus 286 ~---~~~~l~~~l~~L~l~~n~l~~~~~~~~~ 314 (336)
T 2ast_B 286 G---TLQLLKEALPHLQINCSHFTTIARPTIG 314 (336)
T ss_dssp T---CHHHHHHHSTTSEESCCCSCCTTCSSCS
T ss_pred H---HHHHHHhhCcceEEecccCccccCCccc
Confidence 1 22222 1244555777777777766543
No 82
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.87 E-value=1.5e-23 Score=230.24 Aligned_cols=255 Identities=17% Similarity=0.236 Sum_probs=175.2
Q ss_pred EEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCcCc----ccccccc--eeEEEccCCcCcCcCCcccCCC-----CC
Q 003737 96 TIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFS----PQWASLQ--LVELSVMGNRLSGPFPKVLTNI-----TT 164 (799)
Q Consensus 96 ~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p----~~~~~l~--L~~L~Ls~N~l~~~~p~~~~~L-----~~ 164 (799)
..+++.++++|.+|..+...++|++|||++|.+++..+ ..+..++ |++|+|++|.+++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 35788888888888877777779999999999887776 5555553 8889999998887777777665 88
Q ss_pred CCEEEeeCCcCCCCCCcccc----CC-CCCCEEEcccCcCCccCChhc----cC-CCCCCEEEccCCcCCCcC----Ccc
Q 003737 165 LKNLSIEGNLFTGSIPPDIR----KL-INLQKLILSSNSFTGELPAEL----TK-LTNLNDLRISDNNFSGKI----PEF 230 (799)
Q Consensus 165 L~~L~Ls~N~l~~~~p~~~~----~l-~~L~~L~Ls~N~l~~~~p~~~----~~-l~~L~~L~Ls~N~l~~~~----p~~ 230 (799)
|++|+|++|.+++..+..+. .+ ++|++|+|++|++++..+..+ .. .++|++|+|++|+++... +..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 89999999988866665443 34 788999999988886655443 33 358888999888887533 344
Q ss_pred ccCCC-CCCEEEccCCCCCCCCchhhhc----C-CCCCeEEcCCCCCCCCCC---Cc-cCC--CCccEEEccCCcCcccC
Q 003737 231 IGKWK-KIQKLHIQGSSLEGPIPASISA----L-TSLTDLRISDLKGSESAF---PK-LDK--MNLKTLILTKCLIHGEI 298 (799)
Q Consensus 231 ~~~l~-~L~~L~L~~N~l~~~~p~~~~~----l-~~L~~L~L~~n~~~~~~~---~~-l~~--~~L~~L~L~~N~l~~~~ 298 (799)
+..++ +|++|+|++|++++..+..+.. . ++|+.|++++|.+..... +. +.. .+|+.|+|++|.+++..
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~ 241 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPS 241 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCC
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHH
Confidence 45555 8888888888888776654443 3 578888887765443221 11 222 36777777777776543
Q ss_pred C----ccccCCCCCCeeccccccCCCCCch-------hhhccCCCCEEeccCCcCCCcCChhh
Q 003737 299 P----DYIGDMTKLKNIDLSFNNLTGGIPT-------TFEKLAKTNFMYLTGNKLTGPVPKYI 350 (799)
Q Consensus 299 p----~~l~~l~~L~~L~Ls~N~l~~~~p~-------~~~~l~~L~~L~L~~N~l~g~~p~~~ 350 (799)
+ ..+..+++|+.|+|++|.+.+..+. .+..+++|+.|++++|++....|..+
T Consensus 242 ~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~~~~ 304 (362)
T 3goz_A 242 LENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHSIPI 304 (362)
T ss_dssp HHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGCHHH
T ss_pred HHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcchHHH
Confidence 3 2345567777777777775543332 34556667777777777765544433
No 83
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.86 E-value=6.3e-21 Score=222.36 Aligned_cols=240 Identities=28% Similarity=0.353 Sum_probs=198.2
Q ss_pred ccEEEEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEEEe
Q 003737 92 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLSI 170 (799)
Q Consensus 92 ~~v~~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~L 170 (799)
.+++.|+|++|+++ .+|. .+++|++|+|++|++++.++ .+. |++|+|++|++++ +|. .+++|+.|++
T Consensus 61 ~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~~lp~----~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L 128 (622)
T 3g06_A 61 AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLTSLPV----LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWI 128 (622)
T ss_dssp TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCSCCCC----CCTTCCEEEECSCCCCC-CCC---CCTTCCEEEC
T ss_pred CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCCcCCC----CCCCCCEEECcCCcCCC-CCC---CCCCcCEEEC
Confidence 57999999999999 5665 67999999999999986544 444 9999999999996 444 6789999999
Q ss_pred eCCcCCCCCCccccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccCCcCCCcCCccccCCCCCCEEEccCCCCCCC
Q 003737 171 EGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGP 250 (799)
Q Consensus 171 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 250 (799)
++|++++ +|.. +++|++|+|++|++++ +|. .+++|+.|++++|.+++ +| ..+++|+.|+|++|.+++
T Consensus 129 ~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~- 195 (622)
T 3g06_A 129 FGNQLTS-LPVL---PPGLQELSVSDNQLAS-LPA---LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLAS- 195 (622)
T ss_dssp CSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-
T ss_pred CCCCCCc-CCCC---CCCCCEEECcCCcCCC-cCC---ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCC-
Confidence 9999985 6654 4899999999999985 554 35789999999999985 56 457899999999999986
Q ss_pred CchhhhcCCCCCeEEcCCCCCCCCCCCccCCCCccEEEccCCcCcccCCccccCCCCCCeeccccccCCCCCchhhhccC
Q 003737 251 IPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLA 330 (799)
Q Consensus 251 ~p~~~~~l~~L~~L~L~~n~~~~~~~~~l~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 330 (799)
+|. .+++|+.|++++|.+.. +|.. ..+|+.|+|++|.|++ +| ..+++|+.|+|++|+|+ .+|. .++
T Consensus 196 l~~---~~~~L~~L~L~~N~l~~--l~~~-~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~ 261 (622)
T 3g06_A 196 LPT---LPSELYKLWAYNNRLTS--LPAL-PSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LPS 261 (622)
T ss_dssp CCC---CCTTCCEEECCSSCCSS--CCCC-CTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CCT
T ss_pred CCC---ccchhhEEECcCCcccc--cCCC-CCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---ccc
Confidence 444 35789999999866543 3332 2689999999999996 55 45689999999999999 4665 678
Q ss_pred CCCEEeccCCcCCCcCChhhh--cCCCEEEeecCcCcccCCCC
Q 003737 331 KTNFMYLTGNKLTGPVPKYIF--NSNKNVDISLNNFTWESSDP 371 (799)
Q Consensus 331 ~L~~L~L~~N~l~g~~p~~~~--~~l~~l~ls~N~~~g~~p~~ 371 (799)
+|+.|+|++|+|+ .+|..+. ..++.|+|++|.+++.+|..
T Consensus 262 ~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~ 303 (622)
T 3g06_A 262 GLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQA 303 (622)
T ss_dssp TCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHH
T ss_pred cCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHH
Confidence 9999999999999 7888764 46899999999999887754
No 84
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.86 E-value=2.3e-23 Score=230.69 Aligned_cols=240 Identities=20% Similarity=0.270 Sum_probs=142.8
Q ss_pred cCCccccCCCCCCEEEccCCcCCCcCccc----ccccc-eeEEEccCC---cCcCcCCccc-------CCCCCCCEEEee
Q 003737 107 TLPTELSKLRYLKQLDLSRNCLTGSFSPQ----WASLQ-LVELSVMGN---RLSGPFPKVL-------TNITTLKNLSIE 171 (799)
Q Consensus 107 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~----~~~l~-L~~L~Ls~N---~l~~~~p~~~-------~~L~~L~~L~Ls 171 (799)
.++..+..+++|++|+|++|.+....+.. +..++ |++|+|++| ++++.+|..+ ..+++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 45666777788888888888887653333 44555 777777774 3444555544 677777778887
Q ss_pred CCcCCC----CCCccccCCCCCCEEEcccCcCCccCChh----ccCC---------CCCCEEEccCCcCC-CcCC---cc
Q 003737 172 GNLFTG----SIPPDIRKLINLQKLILSSNSFTGELPAE----LTKL---------TNLNDLRISDNNFS-GKIP---EF 230 (799)
Q Consensus 172 ~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~----~~~l---------~~L~~L~Ls~N~l~-~~~p---~~ 230 (799)
+|.+++ .+|..+..+++|++|+|++|.++...+.. +..+ ++|++|++++|+++ +.+| ..
T Consensus 103 ~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 182 (386)
T 2ca6_A 103 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKT 182 (386)
T ss_dssp SCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHH
Confidence 777775 35666777777777777777776433332 3333 67777777777776 3334 35
Q ss_pred ccCCCCCCEEEccCCCCCC-----CCchhhhcCCCCCeEEcCCCCCCC---CCCCc-cCC-CCccEEEccCCcCccc---
Q 003737 231 IGKWKKIQKLHIQGSSLEG-----PIPASISALTSLTDLRISDLKGSE---SAFPK-LDK-MNLKTLILTKCLIHGE--- 297 (799)
Q Consensus 231 ~~~l~~L~~L~L~~N~l~~-----~~p~~~~~l~~L~~L~L~~n~~~~---~~~~~-l~~-~~L~~L~L~~N~l~~~--- 297 (799)
+..+++|++|+|++|.++. ..|..+..+++|+.|+|++|.+.. ..+|. +.. ++|+.|+|++|.+++.
T Consensus 183 l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~ 262 (386)
T 2ca6_A 183 FQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAA 262 (386)
T ss_dssp HHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHH
T ss_pred HHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHH
Confidence 5566777777777777662 223355666666666666544321 11221 222 4555555555555543
Q ss_pred -CCccc--cCCCCCCeeccccccCCC----CCchhh-hccCCCCEEeccCCcCCCcC
Q 003737 298 -IPDYI--GDMTKLKNIDLSFNNLTG----GIPTTF-EKLAKTNFMYLTGNKLTGPV 346 (799)
Q Consensus 298 -~p~~l--~~l~~L~~L~Ls~N~l~~----~~p~~~-~~l~~L~~L~L~~N~l~g~~ 346 (799)
++..+ +.+++|+.|+|++|.+++ .+|..+ .++++|+.|++++|++++..
T Consensus 263 ~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 263 AVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp HHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred HHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcch
Confidence 33444 225556666666666654 355544 44566666666666665544
No 85
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.86 E-value=4.9e-23 Score=228.11 Aligned_cols=238 Identities=17% Similarity=0.179 Sum_probs=194.1
Q ss_pred Ccccccccc-eeEEEccCCcCcCcCC----cccCCCCCCCEEEeeCCc---CCCCCCccc-------cCCCCCCEEEccc
Q 003737 132 FSPQWASLQ-LVELSVMGNRLSGPFP----KVLTNITTLKNLSIEGNL---FTGSIPPDI-------RKLINLQKLILSS 196 (799)
Q Consensus 132 ~p~~~~~l~-L~~L~Ls~N~l~~~~p----~~~~~L~~L~~L~Ls~N~---l~~~~p~~~-------~~l~~L~~L~Ls~ 196 (799)
++..+..++ |++|+|++|.++...+ ..+..+++|++|+|++|. +++.+|..+ ..+++|++|+|++
T Consensus 24 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~ 103 (386)
T 2ca6_A 24 VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSD 103 (386)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCS
T ss_pred HHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCC
Confidence 445555555 9999999999987644 457789999999999964 445666655 7899999999999
Q ss_pred CcCCc----cCChhccCCCCCCEEEccCCcCCCcCCcccc----CC---------CCCCEEEccCCCCC-CCCc---hhh
Q 003737 197 NSFTG----ELPAELTKLTNLNDLRISDNNFSGKIPEFIG----KW---------KKIQKLHIQGSSLE-GPIP---ASI 255 (799)
Q Consensus 197 N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~----~l---------~~L~~L~L~~N~l~-~~~p---~~~ 255 (799)
|.+++ .+|..+..+++|++|+|++|.++...+..+. .+ ++|++|+|++|+++ +.++ ..+
T Consensus 104 n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l 183 (386)
T 2ca6_A 104 NAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTF 183 (386)
T ss_dssp CCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHH
Confidence 99997 4788899999999999999999754444443 34 89999999999998 4455 577
Q ss_pred hcCCCCCeEEcCCCCCCCC----CCC-ccCC-CCccEEEccCCcCc----ccCCccccCCCCCCeeccccccCCCC----
Q 003737 256 SALTSLTDLRISDLKGSES----AFP-KLDK-MNLKTLILTKCLIH----GEIPDYIGDMTKLKNIDLSFNNLTGG---- 321 (799)
Q Consensus 256 ~~l~~L~~L~L~~n~~~~~----~~~-~l~~-~~L~~L~L~~N~l~----~~~p~~l~~l~~L~~L~Ls~N~l~~~---- 321 (799)
..+++|+.|++++|.+... ..+ .+.. ++|+.|+|++|.++ +.+|..+..+++|+.|+|++|++++.
T Consensus 184 ~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~ 263 (386)
T 2ca6_A 184 QSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAA 263 (386)
T ss_dssp HHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHH
T ss_pred HhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHH
Confidence 8899999999999765532 233 3444 78999999999997 67888899999999999999999976
Q ss_pred Cchhhhc--cCCCCEEeccCCcCCC----cCChhh---hcCCCEEEeecCcCcccCC
Q 003737 322 IPTTFEK--LAKTNFMYLTGNKLTG----PVPKYI---FNSNKNVDISLNNFTWESS 369 (799)
Q Consensus 322 ~p~~~~~--l~~L~~L~L~~N~l~g----~~p~~~---~~~l~~l~ls~N~~~g~~p 369 (799)
+|..+.. +++|+.|+|++|++++ .+|..+ .+.++.|++++|.+++..+
T Consensus 264 l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 264 VVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp HHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred HHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 5667744 9999999999999997 588776 3678999999999986653
No 86
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.86 E-value=1e-21 Score=210.72 Aligned_cols=223 Identities=20% Similarity=0.176 Sum_probs=182.1
Q ss_pred cEEEEEeCCCCCcccCCc---cccCCCCCCEEEccCCcCCCcCcccc--cccc-eeEEEccCCcCcCcCC----cccCCC
Q 003737 93 HVVTIALKAQNLTGTLPT---ELSKLRYLKQLDLSRNCLTGSFSPQW--ASLQ-LVELSVMGNRLSGPFP----KVLTNI 162 (799)
Q Consensus 93 ~v~~L~L~~~~l~g~~p~---~~~~l~~L~~L~Ls~N~l~~~~p~~~--~~l~-L~~L~Ls~N~l~~~~p----~~~~~L 162 (799)
+++.+.+.+..++...-. .+..+++|++|+|++|.+.+..|..+ ..+. |++|+|++|.+++..+ ..+..+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~ 144 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLK 144 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBC
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhc
Confidence 467788888777532111 12345679999999999999999887 7776 9999999999998666 455679
Q ss_pred CCCCEEEeeCCcCCCCCCccccCCCCCCEEEcccCcCCcc--C--ChhccCCCCCCEEEccCCcCCCcCCc----cccCC
Q 003737 163 TTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGE--L--PAELTKLTNLNDLRISDNNFSGKIPE----FIGKW 234 (799)
Q Consensus 163 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~--p~~~~~l~~L~~L~Ls~N~l~~~~p~----~~~~l 234 (799)
++|++|+|++|.+++..|..|..+++|++|+|++|++.+. + +..+..+++|++|+|++|+++. ++. .++.+
T Consensus 145 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~l 223 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAAG 223 (310)
T ss_dssp SCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHHT
T ss_pred cCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhcC
Confidence 9999999999999988889999999999999999998753 2 2334789999999999999973 333 35788
Q ss_pred CCCCEEEccCCCCCCCCchhhhcC---CCCCeEEcCCCCCCCCCCCccCCCCccEEEccCCcCcccCCccccCCCCCCee
Q 003737 235 KKIQKLHIQGSSLEGPIPASISAL---TSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNI 311 (799)
Q Consensus 235 ~~L~~L~L~~N~l~~~~p~~~~~l---~~L~~L~L~~n~~~~~~~~~l~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 311 (799)
++|++|+|++|++++..|..+..+ ++|++|++++|.+. .+|..-..+|+.|+|++|++++. |. +..+++|+.|
T Consensus 224 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~--~lp~~~~~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L 299 (310)
T 4glp_A 224 VQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE--QVPKGLPAKLRVLDLSSNRLNRA-PQ-PDELPEVDNL 299 (310)
T ss_dssp CCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC--SCCSCCCSCCSCEECCSCCCCSC-CC-TTSCCCCSCE
T ss_pred CCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC--chhhhhcCCCCEEECCCCcCCCC-ch-hhhCCCccEE
Confidence 999999999999999888888777 69999999997665 34442227999999999999964 43 6788999999
Q ss_pred ccccccCCC
Q 003737 312 DLSFNNLTG 320 (799)
Q Consensus 312 ~Ls~N~l~~ 320 (799)
+|++|+++.
T Consensus 300 ~L~~N~l~~ 308 (310)
T 4glp_A 300 TLDGNPFLV 308 (310)
T ss_dssp ECSSTTTSC
T ss_pred ECcCCCCCC
Confidence 999999974
No 87
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.86 E-value=2.8e-21 Score=199.11 Aligned_cols=197 Identities=16% Similarity=0.155 Sum_probs=160.1
Q ss_pred ceeEEEccCCcCcCcCCcccCCCCCCCEEEeeCCc-CCCCCCccccCCCCCCEEEccc-CcCCccCChhccCCCCCCEEE
Q 003737 140 QLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNL-FTGSIPPDIRKLINLQKLILSS-NSFTGELPAELTKLTNLNDLR 217 (799)
Q Consensus 140 ~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~ 217 (799)
.+++|++++|++++..+..|.++++|++|++++|+ ++...+..|.++++|++|++++ |++++..+..|.++++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 58899999999998877789999999999999997 7766666888999999999998 899876677888999999999
Q ss_pred ccCCcCCCcCCccccCCCCCC---EEEccCC-CCCCCCchhhhcCCCCCeEEcCCCCCCCCCCCccCCCCcc-EEEccCC
Q 003737 218 ISDNNFSGKIPEFIGKWKKIQ---KLHIQGS-SLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLK-TLILTKC 292 (799)
Q Consensus 218 Ls~N~l~~~~p~~~~~l~~L~---~L~L~~N-~l~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~l~~~~L~-~L~L~~N 292 (799)
+++|++++ +|. |..+++|+ +|++++| .+++..+..|.++++| + .|++++|
T Consensus 112 l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L-----------------------~~~L~l~~n 166 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNE-----------------------TLTLKLYNN 166 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSS-----------------------EEEEECCSC
T ss_pred CCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcc-----------------------eeEEEcCCC
Confidence 99999986 666 88888888 8999998 8876655556655554 4 5556666
Q ss_pred cCcccCCccccCCCCCCeecccccc-CCCCCchhhhcc-CCCCEEeccCCcCCCcCChhhhcCCCEEEeecCc
Q 003737 293 LIHGEIPDYIGDMTKLKNIDLSFNN-LTGGIPTTFEKL-AKTNFMYLTGNKLTGPVPKYIFNSNKNVDISLNN 363 (799)
Q Consensus 293 ~l~~~~p~~l~~l~~L~~L~Ls~N~-l~~~~p~~~~~l-~~L~~L~L~~N~l~g~~p~~~~~~l~~l~ls~N~ 363 (799)
+++ .+|......++|+.|+|++|+ +++..+..|..+ ++|+.|++++|+++ .+|...+..++.|+++++.
T Consensus 167 ~l~-~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~-~l~~~~~~~L~~L~l~~~~ 237 (239)
T 2xwt_C 167 GFT-SVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVT-ALPSKGLEHLKELIARNTW 237 (239)
T ss_dssp CCC-EECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCC-CCCCTTCTTCSEEECTTC-
T ss_pred CCc-ccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccc-cCChhHhccCceeeccCcc
Confidence 776 444443333899999999995 997778889999 99999999999999 5676678889999998763
No 88
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.85 E-value=2.6e-21 Score=207.27 Aligned_cols=193 Identities=23% Similarity=0.341 Sum_probs=106.5
Q ss_pred cCCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEEEeeCCcCCCCCCccccCCCCCCE
Q 003737 113 SKLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQK 191 (799)
Q Consensus 113 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 191 (799)
..+++|++|++++|.++.. + .+..++ |++|++++|.+++..+ +..+++|++|+|++|.+++ + +.+..+++|++
T Consensus 38 ~~l~~L~~L~l~~~~i~~l-~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~-~-~~~~~l~~L~~ 111 (308)
T 1h6u_A 38 ADLDGITTLSAFGTGVTTI-E-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-V-SAIAGLQSIKT 111 (308)
T ss_dssp HHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-C-GGGTTCTTCCE
T ss_pred HHcCCcCEEEeeCCCccCc-h-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCC-c-hhhcCCCCCCE
Confidence 3455666666666655542 2 244443 5555555555554332 5566666666666666553 2 24556666666
Q ss_pred EEcccCcCCccCChhccCCCCCCEEEccCCcCCCcCCccccCCCCCCEEEccCCCCCCCCchhhhcCCCCCeEEcCCCCC
Q 003737 192 LILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKG 271 (799)
Q Consensus 192 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~~ 271 (799)
|++++|++++ ++. +..+++|++|++++|++++..+ +..+++|++|+|++|.+++..+ +..+++|
T Consensus 112 L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L---------- 175 (308)
T 1h6u_A 112 LDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKL---------- 175 (308)
T ss_dssp EECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTC----------
T ss_pred EECCCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCC----------
Confidence 6666666653 222 5566666666666666654322 5556666666666666554222 4444444
Q ss_pred CCCCCCccCCCCccEEEccCCcCcccCCccccCCCCCCeeccccccCCCCCchhhhccCCCCEEeccCCcCCC
Q 003737 272 SESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTG 344 (799)
Q Consensus 272 ~~~~~~~l~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g 344 (799)
+.|++++|.+++..+ +..+++|++|+|++|++++..| +..+++|+.|++++|++++
T Consensus 176 -------------~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 176 -------------TTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp -------------CEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred -------------CEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeec
Confidence 444444454443322 5556666666666666664432 5666667777777776663
No 89
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.85 E-value=7.5e-23 Score=224.60 Aligned_cols=250 Identities=16% Similarity=0.165 Sum_probs=194.2
Q ss_pred EEEccCCcCCCcCcccccccc-eeEEEccCCcCcCcCC----cccCCCC-CCCEEEeeCCcCCCCCCccccCC-----CC
Q 003737 120 QLDLSRNCLTGSFSPQWASLQ-LVELSVMGNRLSGPFP----KVLTNIT-TLKNLSIEGNLFTGSIPPDIRKL-----IN 188 (799)
Q Consensus 120 ~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p----~~~~~L~-~L~~L~Ls~N~l~~~~p~~~~~l-----~~ 188 (799)
.++|++|.+++.+|..+...+ |++|+|++|.+++..+ ..+..++ +|++|+|++|.+++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 478999999999998888887 9999999999997777 7788898 89999999999998777777765 99
Q ss_pred CCEEEcccCcCCccCChhc----cCC-CCCCEEEccCCcCCCcCCcccc----C-CCCCCEEEccCCCCCCCCc----hh
Q 003737 189 LQKLILSSNSFTGELPAEL----TKL-TNLNDLRISDNNFSGKIPEFIG----K-WKKIQKLHIQGSSLEGPIP----AS 254 (799)
Q Consensus 189 L~~L~Ls~N~l~~~~p~~~----~~l-~~L~~L~Ls~N~l~~~~p~~~~----~-l~~L~~L~L~~N~l~~~~p----~~ 254 (799)
|++|+|++|.+++..+..+ ..+ ++|++|+|++|++++..+..+. . .++|++|+|++|.++...+ ..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 9999999999997766644 444 8999999999999877665543 3 3699999999999986444 44
Q ss_pred hhcCC-CCCeEEcCCCCCCCCCCCc----cCC--CCccEEEccCCcCccc----CCccccC-CCCCCeeccccccCCCCC
Q 003737 255 ISALT-SLTDLRISDLKGSESAFPK----LDK--MNLKTLILTKCLIHGE----IPDYIGD-MTKLKNIDLSFNNLTGGI 322 (799)
Q Consensus 255 ~~~l~-~L~~L~L~~n~~~~~~~~~----l~~--~~L~~L~L~~N~l~~~----~p~~l~~-l~~L~~L~Ls~N~l~~~~ 322 (799)
+..++ +|++|++++|.+....... +.. .+|+.|+|++|.++.. ++..+.. .++|++|+|++|++++..
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~ 241 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPS 241 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCC
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHH
Confidence 45565 9999999997654433221 222 4899999999999863 4445555 459999999999999765
Q ss_pred ch----hhhccCCCCEEeccCCcCCCcCChhh---------hcCCCEEEeecCcCcccCC
Q 003737 323 PT----TFEKLAKTNFMYLTGNKLTGPVPKYI---------FNSNKNVDISLNNFTWESS 369 (799)
Q Consensus 323 p~----~~~~l~~L~~L~L~~N~l~g~~p~~~---------~~~l~~l~ls~N~~~g~~p 369 (799)
+. .+..+++|+.|+|++|.+.+..+..+ ...++.||+++|.+....+
T Consensus 242 ~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~ 301 (362)
T 3goz_A 242 LENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHS 301 (362)
T ss_dssp HHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGC
T ss_pred HHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcch
Confidence 53 34667899999999999765443321 1235789999999876543
No 90
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.84 E-value=4.3e-21 Score=221.10 Aligned_cols=217 Identities=24% Similarity=0.345 Sum_probs=143.8
Q ss_pred CCCCCCCCCCCC-CCCcccCCCCCCCCCCe-EecCCCCcccEEEEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCcC
Q 003737 55 DWNFGVDPCSQK-GNWELSSDDKKGFESNV-TCDCSSATCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSF 132 (799)
Q Consensus 55 ~W~~~~d~C~~~-~~W~~~~~~~~~~~~gv-~c~~~~~~~~v~~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~ 132 (799)
+|..+.++|... ..| .++ .|.+ .+++.|+|+++++++ +|..+. ++|++|+|++|+|+. +
T Consensus 35 ~W~~~~~~~~~~~~~~-----------~~l~~C~~----~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~~-i 95 (571)
T 3cvr_A 35 KWEKQALPGENRNEAV-----------SLLKECLI----NQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALIS-L 95 (571)
T ss_dssp HHHTTCCTTCCHHHHH-----------HHHHHHHH----TTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCSC-C
T ss_pred HHhccCCccccccchh-----------hhcccccc----CCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCcc-c
Confidence 466566788421 136 566 5754 378899999999986 777663 789999999998884 4
Q ss_pred cccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEEEeeCCcCCCCCCccccCCCCCCEEEcccCcCCccCChhccCCC
Q 003737 133 SPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLT 211 (799)
Q Consensus 133 p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 211 (799)
| ..++ |++|+|++|+|++ +|. +.. +|++|+|++|++++ +|. .+++|++|+|++|.+++ +|. .++
T Consensus 96 p---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~ 160 (571)
T 3cvr_A 96 P---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPT 160 (571)
T ss_dssp C---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCT
T ss_pred c---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCC
Confidence 4 2344 8888888888876 565 554 78888888888775 555 56778888888888775 555 467
Q ss_pred CCCEEEccCCcCCCcCCccccCCCCCCEEEccCCCCCCCCchhhhcCCCCCeEEcCCCCCCCCCCCccCCCCccEEEccC
Q 003737 212 NLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTK 291 (799)
Q Consensus 212 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~l~~~~L~~L~L~~ 291 (799)
+|++|+|++|++++ +|. |. ++|+.|+|++|+|+ .+|. +.. +| .. ....|+.|+|++
T Consensus 161 ~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L-----~~-----------~~~~L~~L~Ls~ 216 (571)
T 3cvr_A 161 SLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RN-----HH-----------SEETEIFFRCRE 216 (571)
T ss_dssp TCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC--------------------------CCEEEECCS
T ss_pred CcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chhh-HHH--hh-----hc-----------ccccceEEecCC
Confidence 77777777777775 555 54 67777777777776 3443 221 11 00 002346666666
Q ss_pred CcCcccCCccccCCCCCCeeccccccCCCCCchhhhccC
Q 003737 292 CLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLA 330 (799)
Q Consensus 292 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 330 (799)
|.|+ .+|..+..+++|+.|+|++|++++.+|..+..++
T Consensus 217 N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 254 (571)
T 3cvr_A 217 NRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQT 254 (571)
T ss_dssp SCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHH
T ss_pred Ccce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhh
Confidence 6666 4566666677777777777777766666666543
No 91
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.84 E-value=1.6e-20 Score=204.96 Aligned_cols=238 Identities=14% Similarity=0.083 Sum_probs=158.5
Q ss_pred EEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCcCcCcCC-cccCCCCCCCE-EEeeC
Q 003737 96 TIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNRLSGPFP-KVLTNITTLKN-LSIEG 172 (799)
Q Consensus 96 ~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p-~~~~~L~~L~~-L~Ls~ 172 (799)
+++.++++++ .+|..+ .+++++|+|++|+|+.+.+..|..++ |++|+|++|++.+.+| ..|.++++|++ +.++.
T Consensus 13 ~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~ 89 (350)
T 4ay9_X 13 VFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKA 89 (350)
T ss_dssp EEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEE
T ss_pred EEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccC
Confidence 4677888888 677766 36889999999999877777788876 8888888888766554 46778887765 55667
Q ss_pred CcCCCCCCccccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccC-CcCCCcCCccccCCC-CCCEEEccCCCCCCC
Q 003737 173 NLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISD-NNFSGKIPEFIGKWK-KIQKLHIQGSSLEGP 250 (799)
Q Consensus 173 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~ 250 (799)
|+++...|..|..+++|++|++++|+++...+..+....++..|++.+ |++....+..|..+. .++.|+|++|+++..
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i 169 (350)
T 4ay9_X 90 NNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEI 169 (350)
T ss_dssp TTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEE
T ss_pred CcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccCC
Confidence 888876677788888888888888888866666666667777888765 456655555666654 577788888877743
Q ss_pred CchhhhcCCCCCeEEcCCCCCCCCCCCccCCCCccEEEccC-CcCcccCCccccCCCCCCeeccccccCCCCCchhhhcc
Q 003737 251 IPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTK-CLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKL 329 (799)
Q Consensus 251 ~p~~~~~l~~L~~L~L~~n~~~~~~~~~l~~~~L~~L~L~~-N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l 329 (799)
|.......+ |+.|++++ |.++...++.|..+++|++|||++|+|+...+.. +
T Consensus 170 -~~~~f~~~~-----------------------L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~---~ 222 (350)
T 4ay9_X 170 -HNSAFNGTQ-----------------------LDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYG---L 222 (350)
T ss_dssp -CTTSSTTEE-----------------------EEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSS---C
T ss_pred -Chhhccccc-----------------------hhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhh---h
Confidence 332222333 45555543 4444333345677777888888888777443333 3
Q ss_pred CCCCEEeccCCcCCCcCCh-hhhcCCCEEEeecCc
Q 003737 330 AKTNFMYLTGNKLTGPVPK-YIFNSNKNVDISLNN 363 (799)
Q Consensus 330 ~~L~~L~L~~N~l~g~~p~-~~~~~l~~l~ls~N~ 363 (799)
.+|+.|.+.++.-...+|. .-+.+++.++++++.
T Consensus 223 ~~L~~L~~l~~~~l~~lP~l~~l~~L~~l~l~~~~ 257 (350)
T 4ay9_X 223 ENLKKLRARSTYNLKKLPTLEKLVALMEASLTYPS 257 (350)
T ss_dssp TTCCEEECTTCTTCCCCCCTTTCCSCCEEECSCHH
T ss_pred ccchHhhhccCCCcCcCCCchhCcChhhCcCCCCc
Confidence 4455555444433335553 224566777776553
No 92
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=99.83 E-value=8.4e-21 Score=201.42 Aligned_cols=124 Identities=27% Similarity=0.458 Sum_probs=102.5
Q ss_pred cCCCCCCeecccCCeeEEEEEeC------CCcEEEEEEccccChhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEE
Q 003737 676 NNFDPANKVGEGGFGSVYKGILS------DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLL 749 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~~------~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 749 (799)
++|...+.||+|+||+||+|++. +++.||||+++.......++|.+|+++|++++|||||+++|+|.+++..+|
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 45667789999999999999853 478899999987776677899999999999999999999999999999999
Q ss_pred EEecCCCCcHHHHHhcCcccc----cccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 750 VYEYMKNNCLSRAIFGKLRIF----HISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 750 V~Ey~~~GsL~~~L~~~~~~~----~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
|||||++|+|.++|+..+... .......+++.++..++.|||+||+|||+
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~ 146 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLAS 146 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999998653210 00112367888899999999999999994
No 93
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.83 E-value=6.3e-20 Score=184.64 Aligned_cols=147 Identities=24% Similarity=0.317 Sum_probs=71.6
Q ss_pred EEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEEEeeCCc
Q 003737 96 TIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNL 174 (799)
Q Consensus 96 ~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~ 174 (799)
.+++++++++ .+|..+ .++|++|+|++|++++..+..|..++ |++|++++|++++..+..|..+++|++|+|++|.
T Consensus 11 ~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~ 87 (208)
T 2o6s_A 11 TVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQ 87 (208)
T ss_dssp EEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCc
Confidence 3444455555 344433 35677777777777655544444444 5555555555554444444455555555555555
Q ss_pred CCCCCCccccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccCCcCCCcCCccccCCCCCCEEEccCC
Q 003737 175 FTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGS 245 (799)
Q Consensus 175 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 245 (799)
+++..+..|.++++|++|++++|++++..+..|.++++|++|++++|++++..+..|..+++|++|++++|
T Consensus 88 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 158 (208)
T 2o6s_A 88 LQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDN 158 (208)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSC
T ss_pred CCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCC
Confidence 54333333444445555555554444333333444444444444444444333333344444444444444
No 94
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.83 E-value=5.5e-20 Score=197.02 Aligned_cols=189 Identities=18% Similarity=0.304 Sum_probs=132.8
Q ss_pred eeEEEccCCcCcCcCCcccCCCCCCCEEEeeCCcCCCCCCccccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccC
Q 003737 141 LVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISD 220 (799)
Q Consensus 141 L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 220 (799)
|++|++++|.++. +| .+..+++|++|+|++|.+++. +. +..+++|++|+|++|++++ ++ .+..+++|++|++++
T Consensus 43 L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~-~~-~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~ 116 (308)
T 1h6u_A 43 ITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDL-AP-LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTS 116 (308)
T ss_dssp CCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTT
T ss_pred cCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCC-hh-HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCC
Confidence 6777777777663 33 466677777777777776643 33 6667777777777777664 22 466667777777777
Q ss_pred CcCCCcCCccccCCCCCCEEEccCCCCCCCCchhhhcCCCCCeEEcCCCCCCCCCCCccCCCCccEEEccCCcCcccCCc
Q 003737 221 NNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPD 300 (799)
Q Consensus 221 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~l~~~~L~~L~L~~N~l~~~~p~ 300 (799)
|++++. +. +..+++|++|++++|.+++..+ +..++ +|+.|++++|.+++..+
T Consensus 117 n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~-----------------------~L~~L~l~~n~l~~~~~- 168 (308)
T 1h6u_A 117 TQITDV-TP-LAGLSNLQVLYLDLNQITNISP--LAGLT-----------------------NLQYLSIGNAQVSDLTP- 168 (308)
T ss_dssp SCCCCC-GG-GTTCTTCCEEECCSSCCCCCGG--GGGCT-----------------------TCCEEECCSSCCCCCGG-
T ss_pred CCCCCc-hh-hcCCCCCCEEECCCCccCcCcc--ccCCC-----------------------CccEEEccCCcCCCChh-
Confidence 776643 32 6666667777777666664322 44444 45666666677765433
Q ss_pred cccCCCCCCeeccccccCCCCCchhhhccCCCCEEeccCCcCCCcCChhhhcCCCEEEeecCcCcc
Q 003737 301 YIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIFNSNKNVDISLNNFTW 366 (799)
Q Consensus 301 ~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~l~~l~ls~N~~~g 366 (799)
+..+++|+.|++++|++++..+ +..+++|+.|+|++|++++..|-.-...++.|++++|.+++
T Consensus 169 -l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 169 -LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSPLANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp -GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGGGTTCTTCCEEEEEEEEEEC
T ss_pred -hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCccccccCCCCCCEEEccCCeeec
Confidence 8899999999999999996554 89999999999999999976653334678999999999975
No 95
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=99.82 E-value=1.8e-20 Score=201.60 Aligned_cols=124 Identities=25% Similarity=0.428 Sum_probs=103.7
Q ss_pred cCCCCCCeecccCCeeEEEEEeC------CCcEEEEEEccccChhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEE
Q 003737 676 NNFDPANKVGEGGFGSVYKGILS------DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLL 749 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~~------~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 749 (799)
++|...+.||+|+||+||+|++. +++.||||+++.......++|.+|+++|++++|||||+++|+|.+.+..+|
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 34556788999999999999864 478999999987777777899999999999999999999999999999999
Q ss_pred EEecCCCCcHHHHHhcCccccc------ccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 750 VYEYMKNNCLSRAIFGKLRIFH------ISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 750 V~Ey~~~GsL~~~L~~~~~~~~------~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
|||||++|+|.++|+....... ......+++.++..|+.|||+||+|||+
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~ 176 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG 176 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999986542211 0112257888899999999999999994
No 96
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.81 E-value=2.7e-19 Score=180.03 Aligned_cols=181 Identities=19% Similarity=0.184 Sum_probs=124.1
Q ss_pred CEEEccCCcCCCcCcccccccceeEEEccCCcCcCcCCcccCCCCCCCEEEeeCCcCCCCCCccccCCCCCCEEEcccCc
Q 003737 119 KQLDLSRNCLTGSFSPQWASLQLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNS 198 (799)
Q Consensus 119 ~~L~Ls~N~l~~~~p~~~~~l~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 198 (799)
+.++.+++.++..+.... -+|++|++++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|++++|+
T Consensus 10 ~~v~c~~~~l~~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~ 87 (208)
T 2o6s_A 10 TTVECYSQGRTSVPTGIP--AQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQ 87 (208)
T ss_dssp TEEECCSSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CEEEecCCCccCCCCCCC--CCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCc
Confidence 467777777765433221 137788888888876666677778888888888888776555567777888888888888
Q ss_pred CCccCChhccCCCCCCEEEccCCcCCCcCCccccCCCCCCEEEccCCCCCCCCchhhhcCCCCCeEEcCCCCCCCCCCCc
Q 003737 199 FTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPK 278 (799)
Q Consensus 199 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~ 278 (799)
+++..+..|.++++|++|++++|++++..+..|..+++|++|+|++|.+++..+..+..+++|+.|++++
T Consensus 88 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~---------- 157 (208)
T 2o6s_A 88 LQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHD---------- 157 (208)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCS----------
T ss_pred CCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecC----------
Confidence 7765555677777888888888877766666677777777777777777765555566666555555544
Q ss_pred cCCCCccEEEccCCcCcccCCccccCCCCCCeeccccccCCCCCchhhhccCC
Q 003737 279 LDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAK 331 (799)
Q Consensus 279 l~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 331 (799)
|.+. +.+++|+.|+++.|+++|.+|..++.++.
T Consensus 158 -------------N~~~-------~~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 158 -------------NPWD-------CTCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp -------------CCBC-------CCTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred -------------CCee-------cCCCCHHHHHHHHHhCCceeeccCccccC
Confidence 4333 23456677777777777777766665554
No 97
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.81 E-value=2.1e-19 Score=207.07 Aligned_cols=185 Identities=21% Similarity=0.308 Sum_probs=126.2
Q ss_pred CCCEEEccCCcCCCcCcccccccceeEEEccCCcCcCcCCcccCCCCCCCEEEeeCCcCCCCCCccccCCCCCCEEEccc
Q 003737 117 YLKQLDLSRNCLTGSFSPQWASLQLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSS 196 (799)
Q Consensus 117 ~L~~L~Ls~N~l~~~~p~~~~~l~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 196 (799)
+|+.|+|++|.+++ +|..+. ..|++|+|++|+|+ .+| ..+++|++|+|++|.+++ +|. +.+ +|++|+|++
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~-~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~ 129 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP-PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDN 129 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC-TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCS
T ss_pred CccEEEeCCCCCCc-cCHhHc-CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCC
Confidence 67777777777776 343332 23777777777776 455 345677777777777765 555 444 677777777
Q ss_pred CcCCccCChhccCCCCCCEEEccCCcCCCcCCccccCCCCCCEEEccCCCCCCCCchhhhcCCCCCeEEcCCCCCCCCCC
Q 003737 197 NSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAF 276 (799)
Q Consensus 197 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~~~~~~~ 276 (799)
|++++ +|. .+++|++|+|++|.+++ +|. .+++|++|+|++|++++ +|. |.
T Consensus 130 N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~-------------------- 179 (571)
T 3cvr_A 130 NQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP-------------------- 179 (571)
T ss_dssp SCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--------------------
T ss_pred CcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--------------------
Confidence 77765 554 45667777777777664 444 45666666666666664 333 22
Q ss_pred CccCCCCccEEEccCCcCcccCCccccCCCCC-------CeeccccccCCCCCchhhhccCCCCEEeccCCcCCCcCChh
Q 003737 277 PKLDKMNLKTLILTKCLIHGEIPDYIGDMTKL-------KNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKY 349 (799)
Q Consensus 277 ~~l~~~~L~~L~L~~N~l~~~~p~~l~~l~~L-------~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~ 349 (799)
.+|+.|+|++|+|+ .+|. +.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|++++.+|..
T Consensus 180 -----~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~ 249 (571)
T 3cvr_A 180 -----ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRES 249 (571)
T ss_dssp -----TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHH
T ss_pred -----CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHH
Confidence 35666777777777 5555 543 66 99999999999 68888888999999999999999998887
Q ss_pred hh
Q 003737 350 IF 351 (799)
Q Consensus 350 ~~ 351 (799)
+.
T Consensus 250 l~ 251 (571)
T 3cvr_A 250 LS 251 (571)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 98
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=99.81 E-value=3.8e-20 Score=197.22 Aligned_cols=122 Identities=23% Similarity=0.362 Sum_probs=99.7
Q ss_pred CCCCCeecccCCeeEEEEEeC------CCcEEEEEEccccC-hhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEE
Q 003737 678 FDPANKVGEGGFGSVYKGILS------DGTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLV 750 (799)
Q Consensus 678 f~~~~~lG~G~~g~Vy~~~~~------~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 750 (799)
++..+.||+|+||+||+|++. +++.||||+++... ....++|.+|++++++++|||||+++|+|.+++..+||
T Consensus 28 ~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV 107 (308)
T 4gt4_A 28 VRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMI 107 (308)
T ss_dssp EEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred CeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEE
Confidence 445678999999999999862 46899999997653 33457899999999999999999999999999999999
Q ss_pred EecCCCCcHHHHHhcCccccc-------ccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 751 YEYMKNNCLSRAIFGKLRIFH-------ISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 751 ~Ey~~~GsL~~~L~~~~~~~~-------~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
||||++|+|.++|+.+..... ......+++.++..++.|||+||+|||+
T Consensus 108 ~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~ 163 (308)
T 4gt4_A 108 FSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSS 163 (308)
T ss_dssp EECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999976532111 1122357788888899999999999994
No 99
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=99.81 E-value=6.7e-20 Score=197.54 Aligned_cols=117 Identities=21% Similarity=0.339 Sum_probs=98.1
Q ss_pred cCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEcccc--ChhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEEe
Q 003737 676 NNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSK--SRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYE 752 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 752 (799)
++|+..+.||+|+||+||+|+. .+|+.||||++... .....+.|.+|+++|++++|||||++++++.+++..|+|||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 5788899999999999999994 57999999999754 33446789999999999999999999999999999999999
Q ss_pred cCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 753 YMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 753 y~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
||++|+|.++|+.++.. .++|.+++.|+.||+.||+|||+
T Consensus 104 y~~gg~L~~~i~~~~~~-------~~~e~~~~~~~~qi~~aL~ylH~ 143 (350)
T 4b9d_A 104 YCEGGDLFKRINAQKGV-------LFQEDQILDWFVQICLALKHVHD 143 (350)
T ss_dssp CCTTCBHHHHHHHTTTC-------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCcHHHHHHHcCCC-------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999765422 57888999999999999999994
No 100
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.80 E-value=2.8e-19 Score=195.06 Aligned_cols=205 Identities=16% Similarity=0.094 Sum_probs=122.3
Q ss_pred CCCCEEEeeCCcCCCCCCccccCCCCCCEEEcccCcCCccCC-hhccCCCCCCE-EEccCCcCCCcCCccccCCCCCCEE
Q 003737 163 TTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELP-AELTKLTNLND-LRISDNNFSGKIPEFIGKWKKIQKL 240 (799)
Q Consensus 163 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~-L~Ls~N~l~~~~p~~~~~l~~L~~L 240 (799)
+++++|+|++|+|+...+..|.++++|++|+|++|++.+.+| ..|.++++|+. +.++.|+++...|..|..+++|++|
T Consensus 30 ~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L 109 (350)
T 4ay9_X 30 RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYL 109 (350)
T ss_dssp TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEE
T ss_pred CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccc
Confidence 345555555555543223345555555555555555443333 23445544443 3334455554445555555555555
Q ss_pred EccCCCCCCCCchhhhcCCCCCeEEcCCCCCCCC-CCCccCC--CCccEEEccCCcCcccCCccccCCCCCCeecccc-c
Q 003737 241 HIQGSSLEGPIPASISALTSLTDLRISDLKGSES-AFPKLDK--MNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSF-N 316 (799)
Q Consensus 241 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~~~~~-~~~~l~~--~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~-N 316 (799)
++++|+++...+..+....++..|++.+++.... ....+.. ..++.|+|++|+|+. +|.......+|++|++++ |
T Consensus 110 ~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~-i~~~~f~~~~L~~l~l~~~n 188 (350)
T 4ay9_X 110 LISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE-IHNSAFNGTQLDELNLSDNN 188 (350)
T ss_dssp EEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCE-ECTTSSTTEEEEEEECTTCT
T ss_pred cccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccC-CChhhccccchhHHhhccCC
Confidence 5555555544444444444455555544222221 1111222 368889999999985 455555667899999985 6
Q ss_pred cCCCCCchhhhccCCCCEEeccCCcCCCcCChhhhcCCCEEEeecCcCcccCC
Q 003737 317 NLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIFNSNKNVDISLNNFTWESS 369 (799)
Q Consensus 317 ~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~l~~l~ls~N~~~g~~p 369 (799)
.++...+..|..+++|++|+|++|+|+ .+|...+..++.|.+.+++--..+|
T Consensus 189 ~l~~i~~~~f~~l~~L~~LdLs~N~l~-~lp~~~~~~L~~L~~l~~~~l~~lP 240 (350)
T 4ay9_X 189 NLEELPNDVFHGASGPVILDISRTRIH-SLPSYGLENLKKLRARSTYNLKKLP 240 (350)
T ss_dssp TCCCCCTTTTTTEECCSEEECTTSCCC-CCCSSSCTTCCEEECTTCTTCCCCC
T ss_pred cccCCCHHHhccCcccchhhcCCCCcC-ccChhhhccchHhhhccCCCcCcCC
Confidence 676555567899999999999999999 6788888889999887765544555
No 101
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=99.80 E-value=6.5e-20 Score=197.36 Aligned_cols=114 Identities=23% Similarity=0.435 Sum_probs=103.0
Q ss_pred cCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccChhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEEecC
Q 003737 676 NNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYM 754 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 754 (799)
+.|+..+.||+|+||+||+|.. .+|+.||||+++.......+.+.+|+++|++++|||||++++++.+++..|||||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 4577788999999999999995 579999999997665555667899999999999999999999999999999999999
Q ss_pred CCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 755 KNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 755 ~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
++|+|.+++.+. .+++.+++.|+.||+.||+|||+
T Consensus 154 ~gg~L~~~l~~~----------~l~e~~~~~~~~qi~~aL~ylH~ 188 (346)
T 4fih_A 154 EGGALTDIVTHT----------RMNEEQIAAVCLAVLQALSVLHA 188 (346)
T ss_dssp TTEEHHHHHHHS----------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHcC----------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999753 57899999999999999999994
No 102
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=99.79 E-value=6.8e-20 Score=194.26 Aligned_cols=115 Identities=21% Similarity=0.278 Sum_probs=103.4
Q ss_pred cCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccC---hhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEE
Q 003737 676 NNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKS---RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 751 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 751 (799)
++|+..+.||+|+||+||+|+. .+|+.||||++.+.. ....+.+.+|+++|++++|||||++++++.+++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 4588899999999999999994 579999999997542 234578999999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 752 EYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 752 Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
|||++|+|.++|.+.+ .++|.+++.|+.||+.||+|||+
T Consensus 112 Ey~~gG~L~~~i~~~~---------~l~e~~~~~~~~qi~~al~ylH~ 150 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIG---------SFDETCTRFYTAEIVSALEYLHG 150 (311)
T ss_dssp CCCTTEEHHHHHHHHS---------SCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCCCCCHHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998654 68899999999999999999994
No 103
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=99.79 E-value=1.7e-19 Score=199.04 Aligned_cols=115 Identities=23% Similarity=0.431 Sum_probs=104.2
Q ss_pred hcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccChhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEEec
Q 003737 675 TNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEY 753 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 753 (799)
.+.|+..+.||+|+||.||+|.. .+|+.||||++........+.+.+|+++|++++|||||++++++.+++..||||||
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy 229 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 229 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeC
Confidence 45688889999999999999995 57999999999776555567799999999999999999999999999999999999
Q ss_pred CCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 754 MKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 754 ~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
|++|+|.++++.. .+++.+++.|+.||+.||+|||+
T Consensus 230 ~~gG~L~~~i~~~----------~l~e~~~~~~~~qil~aL~ylH~ 265 (423)
T 4fie_A 230 LEGGALTDIVTHT----------RMNEEQIAAVCLAVLQALSVLHA 265 (423)
T ss_dssp CTTEEHHHHHHHS----------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcHHHHHhcc----------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999753 57899999999999999999994
No 104
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.79 E-value=1.4e-18 Score=177.68 Aligned_cols=149 Identities=21% Similarity=0.289 Sum_probs=127.0
Q ss_pred CCCCCcccCCccccCCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEEEeeCCcCCCC
Q 003737 100 KAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGS 178 (799)
Q Consensus 100 ~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~ 178 (799)
++++++ .+|..+. ++|++|+|++|.+++..|..|..+. |++|+|++|+|+...+..|..+++|++|+|++|++++.
T Consensus 27 ~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l 103 (229)
T 3e6j_A 27 RSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVL 103 (229)
T ss_dssp TTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCC
T ss_pred cCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCcc
Confidence 344454 5666554 8899999999999998888888887 99999999999877777789999999999999999877
Q ss_pred CCccccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccCCcCCCcCCccccCCCCCCEEEccCCCCCCCCc
Q 003737 179 IPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIP 252 (799)
Q Consensus 179 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 252 (799)
.+..|..+++|++|+|++|+++ .+|..+..+++|++|+|++|++++..+..|..+++|+.|+|++|.+....+
T Consensus 104 ~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 104 PSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp CTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred ChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 6777889999999999999998 788888999999999999999997777788889999999999998886543
No 105
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=99.78 E-value=3.5e-19 Score=189.14 Aligned_cols=115 Identities=21% Similarity=0.389 Sum_probs=97.7
Q ss_pred hhcCCCCCCeecccCCeeEEEEEeCCCcEEEEEEcccc--ChhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEE
Q 003737 674 ATNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSK--SRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 751 (799)
Q Consensus 674 ~t~~f~~~~~lG~G~~g~Vy~~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 751 (799)
..+++...+.||+|+||+||+|++.+ .||||+++.. .....+.|.+|++++++++|||||+++|+|.+ +..+|||
T Consensus 34 ~~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVm 110 (307)
T 3omv_A 34 EASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVT 110 (307)
T ss_dssp CTTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEE
T ss_pred cHHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEE
Confidence 34567778899999999999999753 5999999754 33445789999999999999999999999854 5689999
Q ss_pred ecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 752 EYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 752 Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
|||++|+|.++|+.... .+++.++..++.|||+||+|||+
T Consensus 111 Ey~~gGsL~~~l~~~~~--------~l~~~~~~~i~~qia~gL~yLH~ 150 (307)
T 3omv_A 111 QWCEGSSLYKHLHVQET--------KFQMFQLIDIARQTAQGMDYLHA 150 (307)
T ss_dssp ECCSSCBHHHHHHTSCC--------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EcCCCCCHHHHHhhcCC--------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999986532 57788888999999999999994
No 106
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=99.78 E-value=4.1e-19 Score=187.14 Aligned_cols=112 Identities=21% Similarity=0.349 Sum_probs=96.8
Q ss_pred CCCCeecccCCeeEEEEEe-CCCcEEEEEEcccc--ChhhHHHHHHHHHHHHhCCCCcccceeEEEEE----CCEEEEEE
Q 003737 679 DPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSK--SRQGNREFVNEIGMISAQQHPNLVKLYGCCVE----GNQLLLVY 751 (799)
Q Consensus 679 ~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~----~~~~~lV~ 751 (799)
...+.||+|+||+||+|.. .++..||||++... .....+.|.+|++++++++|||||+++++|.+ ++..||||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 3456799999999999995 57899999999654 33445789999999999999999999999875 34589999
Q ss_pred ecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 752 EYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 752 Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
|||++|+|.+++++.. .+++..++.|+.||++||+|||+
T Consensus 109 Ey~~gg~L~~~l~~~~---------~l~~~~~~~~~~qi~~aL~ylH~ 147 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRFK---------VMKIKVLRSWCRQILKGLQFLHT 147 (290)
T ss_dssp ECCCSCBHHHHHHHHS---------SCCHHHHHHHHHHHHHHHHHHHT
T ss_pred eCCCCCCHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998654 67888999999999999999995
No 107
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.78 E-value=2.5e-20 Score=222.23 Aligned_cols=194 Identities=22% Similarity=0.236 Sum_probs=83.0
Q ss_pred cCCCCHHHHHHHHHHHHhcCCCCCC------CCCCCCCCCCCCcccCCCCCCCCCCeEecCCCCcccEEEEEeCCCCCcc
Q 003737 33 ANKLHAEEVKALKQIGRKLGKKDWN------FGVDPCSQKGNWELSSDDKKGFESNVTCDCSSATCHVVTIALKAQNLTG 106 (799)
Q Consensus 33 ~~~~~~~~~~aL~~~~~~~~~~~W~------~~~d~C~~~~~W~~~~~~~~~~~~gv~c~~~~~~~~v~~L~L~~~~l~g 106 (799)
+.+..+.++++|.+++.++...+|. ....++. .| .++.+. .++++.|+|.++.+..
T Consensus 126 s~s~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-----------~~~~~s----~~~~~~l~L~~n~~~~ 187 (727)
T 4b8c_D 126 SKSLVDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSG---TA-----------TNSAVS----TPLTPKIELFANGKDE 187 (727)
T ss_dssp ------CCCHHHHHHHHHHHHHHTTC------------------------------------------------------
T ss_pred hhhccccchhhhhhhhhhcccccCcccCCCcCCCCccc---cC-----------CCceec----CCccceEEeeCCCCCc
Confidence 3446677899999999887554443 2222221 45 444443 3679999999988875
Q ss_pred cCCccccCCCCCCEEEccCCcCCCcCcccccccceeEEEccCCcCcCcCCcccCCCCCCCEEEeeCCcCCCCCCccccCC
Q 003737 107 TLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKL 186 (799)
Q Consensus 107 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l 186 (799)
++.. .|+.++|+.|.+.+ ++++.|.+. ..|+.+..++.|+.|+|++|.+. .+|..+..+
T Consensus 188 -~~~~-----~l~~l~Ls~~~i~~-------------~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l 246 (727)
T 4b8c_D 188 -ANQA-----LLQHKKLSQYSIDE-------------DDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKY 246 (727)
T ss_dssp ------------------------------------------------------CCCCCCEEECTTSCCS-CCCGGGGGC
T ss_pred -chhh-----HhhcCccCcccccC-------------cccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCC
Confidence 3332 34556666665543 344455554 55666666677777777777666 566666666
Q ss_pred CCCCEEEcccCcCCccCChhccCCCCCCEEEccCCcCCCcCCccccCCCCCCEEEccCCCCCCCCchhhhcCCCCCeEEc
Q 003737 187 INLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRI 266 (799)
Q Consensus 187 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 266 (799)
++|++|+|++|.|+ .+|..|.++++|++|+|++|.|+ .+|..|+.+++|++|+|++|.|+ .+|..|.++++|+.|+|
T Consensus 247 ~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L 323 (727)
T 4b8c_D 247 DFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGV 323 (727)
T ss_dssp CSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEEC
T ss_pred CCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeC
Confidence 77777777777766 66666666777777777777766 55666666677777777777665 45555666655555544
Q ss_pred CC
Q 003737 267 SD 268 (799)
Q Consensus 267 ~~ 268 (799)
++
T Consensus 324 ~~ 325 (727)
T 4b8c_D 324 EG 325 (727)
T ss_dssp TT
T ss_pred CC
Confidence 44
No 108
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.78 E-value=1e-18 Score=177.55 Aligned_cols=155 Identities=17% Similarity=0.238 Sum_probs=131.9
Q ss_pred EEEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCcCc-ccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEEEeeC
Q 003737 95 VTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFS-PQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLSIEG 172 (799)
Q Consensus 95 ~~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~ 172 (799)
+.++++++.++ .+|..+. ..+++|+|++|++++..+ ..|..++ |++|+|++|+|++..+..|.++++|++|+|++
T Consensus 14 ~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 37899999998 4776654 457899999999998855 4577776 99999999999988888899999999999999
Q ss_pred CcCCCCCCccccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccCCcCCCcCCccccCCCCCCEEEccCCCCCCCCc
Q 003737 173 NLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIP 252 (799)
Q Consensus 173 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 252 (799)
|.+++..+..|..+++|++|+|++|++++..|..|..+++|++|+|++|++++..|..|..+++|++|+|++|.+.+..+
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 99987777778899999999999999998888889999999999999999988888889899999999999998876544
No 109
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.78 E-value=1.3e-18 Score=176.74 Aligned_cols=152 Identities=21% Similarity=0.307 Sum_probs=127.0
Q ss_pred EEEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEEEeeCC
Q 003737 95 VTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLSIEGN 173 (799)
Q Consensus 95 ~~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N 173 (799)
..+++++++++ .+|..+. ++|++|+|++|++++..+..|..++ |++|+|++|++++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 35788888888 5676654 7899999999999988887888876 899999999988888888888889999999999
Q ss_pred cCCCCCCccccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccCCcCCCcCCccccCCCCCCEEEccCCCCCC
Q 003737 174 LFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEG 249 (799)
Q Consensus 174 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 249 (799)
.++...+..|..+++|++|+|++|++++..|..|..+++|++|+|++|++++..+..|..+++|++|+|++|.+..
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 8886555567888888888888888888778888888888888888888887777778888888888888888764
No 110
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.77 E-value=1.5e-18 Score=190.26 Aligned_cols=171 Identities=22% Similarity=0.229 Sum_probs=143.0
Q ss_pred EEEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCcCccccc-ccc-eeEEEccCCcCcCcCCcccCCCCCCCEEEeeC
Q 003737 95 VTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWA-SLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLSIEG 172 (799)
Q Consensus 95 ~~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~ 172 (799)
..+++++++++ .+|..+. +.++.|+|++|++++..+..|. .+. |++|+|++|+|++..|..|.++++|++|+|++
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 36889999998 5776654 4689999999999998888886 776 99999999999988888999999999999999
Q ss_pred CcCCCCCCccccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccCCcCCCcCCccc---cCCCCCCEEEccCCCCCC
Q 003737 173 NLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFI---GKWKKIQKLHIQGSSLEG 249 (799)
Q Consensus 173 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~---~~l~~L~~L~L~~N~l~~ 249 (799)
|++++..+..|..+++|++|+|++|++++..|..|.++++|++|+|++|++++..+..| ..+++|+.|+|++|+++.
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 99987777789999999999999999998888899999999999999999996555555 568999999999999997
Q ss_pred CCchhhhcCCCC--CeEEcCC
Q 003737 250 PIPASISALTSL--TDLRISD 268 (799)
Q Consensus 250 ~~p~~~~~l~~L--~~L~L~~ 268 (799)
..+..+..++.+ +.|++.+
T Consensus 178 l~~~~~~~l~~~~l~~l~l~~ 198 (361)
T 2xot_A 178 LPLTDLQKLPAWVKNGLYLHN 198 (361)
T ss_dssp CCHHHHHHSCHHHHTTEECCS
T ss_pred cCHHHhhhccHhhcceEEecC
Confidence 766777776653 4455544
No 111
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=99.77 E-value=8.8e-19 Score=183.05 Aligned_cols=114 Identities=21% Similarity=0.392 Sum_probs=97.7
Q ss_pred cCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccC---hhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEE
Q 003737 676 NNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKS---RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 751 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 751 (799)
++|+..+.||+|+||+||+|.. .+|+.||||++++.. ....+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 6799999999999999999994 579999999997542 233567999999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 752 EYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 752 Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
||+ +|+|.+++.+++ .+++.+++.++.||+.||+|||+
T Consensus 93 Ey~-~g~L~~~l~~~~---------~l~e~~~~~~~~qi~~al~ylH~ 130 (275)
T 3hyh_A 93 EYA-GNELFDYIVQRD---------KMSEQEARRFFQQIISAVEYCHR 130 (275)
T ss_dssp ECC-CEEHHHHHHHSC---------SCCHHHHHHHHHHHHHHHHHHHH
T ss_pred eCC-CCCHHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 999 689999998765 68899999999999999999995
No 112
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=99.76 E-value=5.9e-19 Score=189.27 Aligned_cols=110 Identities=22% Similarity=0.309 Sum_probs=98.3
Q ss_pred cCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccChhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEEecC
Q 003737 676 NNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYM 754 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 754 (799)
+.|...+.||+|+||+||+|+. .+|+.||||+++.... +.+|++++++++|||||++++++.+++..|||||||
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 132 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELL 132 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEecc
Confidence 4566778899999999999995 5799999999975432 247999999999999999999999999999999999
Q ss_pred CCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 755 KNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 755 ~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
++|+|.++|++.+ .+++.+++.|+.||+.||+|||+
T Consensus 133 ~gg~L~~~l~~~~---------~l~e~~~~~~~~qi~~aL~ylH~ 168 (336)
T 4g3f_A 133 EGGSLGQLIKQMG---------CLPEDRALYYLGQALEGLEYLHT 168 (336)
T ss_dssp TTCBHHHHHHHHS---------SCCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCcHHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998654 68899999999999999999996
No 113
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.75 E-value=8.8e-18 Score=170.60 Aligned_cols=149 Identities=15% Similarity=0.187 Sum_probs=128.8
Q ss_pred CEEEccCCcCCCcCcccccccceeEEEccCCcCcCcCC-cccCCCCCCCEEEeeCCcCCCCCCccccCCCCCCEEEcccC
Q 003737 119 KQLDLSRNCLTGSFSPQWASLQLVELSVMGNRLSGPFP-KVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSN 197 (799)
Q Consensus 119 ~~L~Ls~N~l~~~~p~~~~~l~L~~L~Ls~N~l~~~~p-~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 197 (799)
+++++++|.++.. |..+.. .+++|+|++|++++..| ..|..+++|++|+|++|.+++..+..|.++++|++|+|++|
T Consensus 14 ~~l~~s~n~l~~i-P~~~~~-~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 14 TTVDCSNQKLNKI-PEHIPQ-YTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp TEEECCSSCCSSC-CSCCCT-TCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CEeEeCCCCcccC-ccCCCC-CCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 5899999999864 443321 27899999999998755 46889999999999999999877778999999999999999
Q ss_pred cCCccCChhccCCCCCCEEEccCCcCCCcCCccccCCCCCCEEEccCCCCCCCCchhhhcCCCCCeEEcCCC
Q 003737 198 SFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDL 269 (799)
Q Consensus 198 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n 269 (799)
++++..+..|..+++|++|+|++|++++..|..|..+++|++|+|++|++++..|..|..+++|+.|++++|
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 163 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLAN 163 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCc
Confidence 999888888999999999999999999888999999999999999999999888888888888777777664
No 114
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.75 E-value=3.4e-18 Score=187.36 Aligned_cols=128 Identities=20% Similarity=0.136 Sum_probs=77.4
Q ss_pred CEEEccCCcCCCcCcccccccceeEEEccCCcCcCcCCcccC-CCCCCCEEEeeCCcCCCCCCccccCCCCCCEEEcccC
Q 003737 119 KQLDLSRNCLTGSFSPQWASLQLVELSVMGNRLSGPFPKVLT-NITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSN 197 (799)
Q Consensus 119 ~~L~Ls~N~l~~~~p~~~~~l~L~~L~Ls~N~l~~~~p~~~~-~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 197 (799)
+.+++++|+++.. |..+.. .+++|+|++|+|++..+..+. ++++|++|+|++|++++..+..|.++++|++|+|++|
T Consensus 21 ~~l~c~~~~l~~i-P~~~~~-~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 98 (361)
T 2xot_A 21 NILSCSKQQLPNV-PQSLPS-YTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSN 98 (361)
T ss_dssp TEEECCSSCCSSC-CSSCCT-TCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcCcc-CccCCC-CCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCC
Confidence 4677777777753 322211 256666666666665555565 6666666666666666555555666666666666666
Q ss_pred cCCccCChhccCCCCCCEEEccCCcCCCcCCccccCCCCCCEEEccCCCCC
Q 003737 198 SFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLE 248 (799)
Q Consensus 198 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 248 (799)
++++..+..|..+++|++|+|++|++++..|..|..+++|++|+|++|+++
T Consensus 99 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~ 149 (361)
T 2xot_A 99 HLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQIS 149 (361)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC
T ss_pred cCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCC
Confidence 666555555666666666666666666555555555555555555555555
No 115
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=99.75 E-value=3.2e-19 Score=188.96 Aligned_cols=115 Identities=18% Similarity=0.314 Sum_probs=96.1
Q ss_pred cCCCCCCeecccCCeeEEEEEe----CCCcEEEEEEccccC--hhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEE
Q 003737 676 NNFDPANKVGEGGFGSVYKGIL----SDGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLL 749 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~----~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 749 (799)
++|+..+.||+|+||+||+|+. .+++.||||+++... ......+.+|+++|++++|||||++++++.+++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 4588899999999999999984 247899999997542 2234578899999999999999999999999999999
Q ss_pred EEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 750 VYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 750 V~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
|||||++|+|.+++.+.+ .+++.+++.|+.||+.||+|||+
T Consensus 104 vmEy~~gg~L~~~l~~~~---------~l~e~~~~~~~~qi~~aL~ylH~ 144 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEV---------MFTEEDVKFYLAELALALDHLHS 144 (304)
T ss_dssp EECCCTTCEEHHHHHHHC---------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEcCCCCCHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998654 68899999999999999999995
No 116
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.75 E-value=6.1e-18 Score=179.47 Aligned_cols=173 Identities=20% Similarity=0.346 Sum_probs=106.3
Q ss_pred ccCCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEEEeeCCcCCCCCCccccCCCCCC
Q 003737 112 LSKLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQ 190 (799)
Q Consensus 112 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 190 (799)
+..+++|++|++++|.++.. + .+..++ |++|++++|++++..+ +.++++|++|+|++|.+++ + +.+..+++|+
T Consensus 42 ~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~ 115 (291)
T 1h6t_A 42 QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-L-SSLKDLKKLK 115 (291)
T ss_dssp HHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-G-GGGTTCTTCC
T ss_pred hhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-C-hhhccCCCCC
Confidence 34566677777777766644 2 244444 6666666666664433 6666666666666666653 2 2366666666
Q ss_pred EEEcccCcCCccCChhccCCCCCCEEEccCCcCCCcCCccccCCCCCCEEEccCCCCCCCCchhhhcCCCCCeEEcCCCC
Q 003737 191 KLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLK 270 (799)
Q Consensus 191 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~ 270 (799)
+|++++|++++. ..+..+++|++|++++|++++. +.+..+++|++|+|++|++++..+ +..++
T Consensus 116 ~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~----------- 178 (291)
T 1h6t_A 116 SLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLT----------- 178 (291)
T ss_dssp EEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCT-----------
T ss_pred EEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCC-----------
Confidence 666666666642 3456666666666666666643 455666666666666666654333 44444
Q ss_pred CCCCCCCccCCCCccEEEccCCcCcccCCccccCCCCCCeeccccccCCCC
Q 003737 271 GSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGG 321 (799)
Q Consensus 271 ~~~~~~~~l~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 321 (799)
+|+.|++++|.+++ +| .+..+++|+.|++++|+++..
T Consensus 179 ------------~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~l~~n~i~~~ 215 (291)
T 1h6t_A 179 ------------KLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQECLNK 215 (291)
T ss_dssp ------------TCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEEEEEECC
T ss_pred ------------ccCEEECCCCcCCC-Ch-hhccCCCCCEEECcCCcccCC
Confidence 45555556666664 33 377888899999999988753
No 117
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.75 E-value=6.4e-18 Score=179.35 Aligned_cols=169 Identities=22% Similarity=0.357 Sum_probs=81.0
Q ss_pred CCCCCCEEEeeCCcCCCCCCccccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccCCcCCCcCCccccCCCCCCEE
Q 003737 161 NITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKL 240 (799)
Q Consensus 161 ~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 240 (799)
.+++|++|++++|.++. ++ .+..+++|++|++++|++++..+ +.++++|++|++++|++++ + +.+..+++|++|
T Consensus 44 ~l~~L~~L~l~~~~i~~-~~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L 117 (291)
T 1h6t_A 44 ELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-L-SSLKDLKKLKSL 117 (291)
T ss_dssp HHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-G-GGGTTCTTCCEE
T ss_pred hcCcccEEEccCCCccc-Ch-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-C-hhhccCCCCCEE
Confidence 34445555555555442 22 24445555555555555543222 4555555555555555543 1 224555555555
Q ss_pred EccCCCCCCCCchhhhcCCCCCeEEcCCCCCCCCCCCccCC-CCccEEEccCCcCcccCCccccCCCCCCeeccccccCC
Q 003737 241 HIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDK-MNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLT 319 (799)
Q Consensus 241 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~l~~-~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 319 (799)
+|++|++++. +.+..+++|+.|++++|..... +.+.. .+|+.|++++|.+++..| +..+++|+.|++++|+++
T Consensus 118 ~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~ 191 (291)
T 1h6t_A 118 SLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHIS 191 (291)
T ss_dssp ECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred ECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCC
Confidence 5555555432 2344444444444443222111 11222 344444555555554333 556666666666666666
Q ss_pred CCCchhhhccCCCCEEeccCCcCC
Q 003737 320 GGIPTTFEKLAKTNFMYLTGNKLT 343 (799)
Q Consensus 320 ~~~p~~~~~l~~L~~L~L~~N~l~ 343 (799)
+ +| .+..+++|+.|++++|+++
T Consensus 192 ~-l~-~l~~l~~L~~L~l~~n~i~ 213 (291)
T 1h6t_A 192 D-LR-ALAGLKNLDVLELFSQECL 213 (291)
T ss_dssp B-CG-GGTTCTTCSEEEEEEEEEE
T ss_pred C-Ch-hhccCCCCCEEECcCCccc
Confidence 4 23 2566666666666666655
No 118
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.75 E-value=1.4e-17 Score=169.17 Aligned_cols=149 Identities=15% Similarity=0.199 Sum_probs=127.1
Q ss_pred CEEEccCCcCCCcCcccccccceeEEEccCCcCcCcCCcccCCCCCCCEEEeeCCcCCCCCCccccCCCCCCEEEcccCc
Q 003737 119 KQLDLSRNCLTGSFSPQWASLQLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNS 198 (799)
Q Consensus 119 ~~L~Ls~N~l~~~~p~~~~~l~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 198 (799)
+.++++++.++..+. .+. ..+++|+|++|+|++..+..|..+++|++|+|++|.+++..|..|.++++|++|+|++|+
T Consensus 14 ~~v~c~~~~l~~iP~-~l~-~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~ 91 (220)
T 2v9t_B 14 NIVDCRGKGLTEIPT-NLP-ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 91 (220)
T ss_dssp TEEECTTSCCSSCCS-SCC-TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSC
T ss_pred CEEEcCCCCcCcCCC-ccC-cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCc
Confidence 578999999886543 332 248999999999998888889999999999999999998888899999999999999999
Q ss_pred CCccCChhccCCCCCCEEEccCCcCCCcCCccccCCCCCCEEEccCCCCCCCCchhhhcCCCCCeEEcCCC
Q 003737 199 FTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDL 269 (799)
Q Consensus 199 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n 269 (799)
++...+..|..+++|++|+|++|++++..|..|..+++|++|+|++|++++..+..|..+++|+.|++++|
T Consensus 92 l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 162 (220)
T 2v9t_B 92 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQN 162 (220)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSS
T ss_pred CCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCC
Confidence 99665666888999999999999999888899999999999999999999877777887777777776664
No 119
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.75 E-value=9.8e-18 Score=195.16 Aligned_cols=158 Identities=22% Similarity=0.382 Sum_probs=92.2
Q ss_pred EEeCCCCCcccCCccccCCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEEEeeCCcC
Q 003737 97 IALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLF 175 (799)
Q Consensus 97 L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l 175 (799)
+.+..+.+...++ +..|++|+.|++++|.+.... .+..++ |++|+|++|.+++..| +..+++|+.|+|++|.+
T Consensus 26 l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~l~--~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l 99 (605)
T 1m9s_A 26 DNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSVQ--GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKI 99 (605)
T ss_dssp HHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCCCT--TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCC
T ss_pred HhccCCCcccccc--hhcCCCCCEEECcCCCCCCCh--HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCC
Confidence 3344444443332 445666666666666665432 345554 6666666666665443 66666666666666666
Q ss_pred CCCCCccccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccCCcCCCcCCccccCCCCCCEEEccCCCCCCCCchhh
Q 003737 176 TGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASI 255 (799)
Q Consensus 176 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 255 (799)
++ +| .+..+++|++|+|++|++++ + ..+..+++|+.|+|++|++++. ..+..+++|+.|+|++|.+++..| +
T Consensus 100 ~~-l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l 171 (605)
T 1m9s_A 100 KD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--L 171 (605)
T ss_dssp CC-CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--G
T ss_pred CC-Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--h
Confidence 53 22 56666666666666666664 2 3466666666666666666643 456666666666666666665444 5
Q ss_pred hcCCCCCeEEcCC
Q 003737 256 SALTSLTDLRISD 268 (799)
Q Consensus 256 ~~l~~L~~L~L~~ 268 (799)
..+++|+.|+|++
T Consensus 172 ~~l~~L~~L~Ls~ 184 (605)
T 1m9s_A 172 AGLTKLQNLYLSK 184 (605)
T ss_dssp TTCTTCCEEECCS
T ss_pred ccCCCCCEEECcC
Confidence 5555555555544
No 120
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=99.74 E-value=2.9e-18 Score=186.04 Aligned_cols=134 Identities=20% Similarity=0.314 Sum_probs=107.5
Q ss_pred ccHHHHHHhhcCCCCCCeecccCCeeEEEEEeC------CCcEEEEEEccccC-hhhHHHHHHHHHHHHhCCC-Ccccce
Q 003737 666 YTLRQIKAATNNFDPANKVGEGGFGSVYKGILS------DGTVIAVKQLSSKS-RQGNREFVNEIGMISAQQH-PNLVKL 737 (799)
Q Consensus 666 ~~~~~~~~~t~~f~~~~~lG~G~~g~Vy~~~~~------~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H-~niv~l 737 (799)
+...+++...++|+..+.||+|+||+||+|... .++.||||+++... ....+.|.+|+++|.+++| ||||++
T Consensus 54 ~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l 133 (353)
T 4ase_A 54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 133 (353)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEE
Confidence 445566777888999999999999999999853 24689999997653 3345789999999999965 899999
Q ss_pred eEEEEEC-CEEEEEEecCCCCcHHHHHhcCccccc-------ccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 738 YGCCVEG-NQLLLVYEYMKNNCLSRAIFGKLRIFH-------ISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 738 ~g~~~~~-~~~~lV~Ey~~~GsL~~~L~~~~~~~~-------~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
+|+|.++ +..++|||||++|+|.++|+....... ......+++.++..|+.|||+||+|||+
T Consensus 134 ~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~ 203 (353)
T 4ase_A 134 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 203 (353)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhh
Confidence 9999764 578999999999999999986543211 0112357788899999999999999994
No 121
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=99.74 E-value=3.8e-18 Score=181.16 Aligned_cols=118 Identities=19% Similarity=0.402 Sum_probs=96.0
Q ss_pred cCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccC-hhhHHHHHHHHHHHHhCCCCcccceeEEEEECC--------
Q 003737 676 NNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGN-------- 745 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~-------- 745 (799)
++|+..+.||+|+||+||+|+. .+|+.||||+++... ....+.+.+|+++|++++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 3588889999999999999995 579999999997543 334578999999999999999999999987544
Q ss_pred ----EEEEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 746 ----QLLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 746 ----~~~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
..|+|||||++|+|.+++..+.... ..++..+..++.||++||+|||+
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~------~~~~~~~~~i~~qi~~al~ylH~ 136 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIE------ERERSVCLHIFLQIAEAVEFLHS 136 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGG------GSCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCC------hhHHHHHHHHHHHHHHHHHHHHH
Confidence 3699999999999999998664321 22345677889999999999995
No 122
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.74 E-value=4.8e-18 Score=181.10 Aligned_cols=111 Identities=24% Similarity=0.320 Sum_probs=89.8
Q ss_pred CCCCCCeecccCCeeEEEEEeCCCcEEEEEEccccChhhHHHHHHHHHHHHhCCCCcccceeEEEEECC----EEEEEEe
Q 003737 677 NFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGN----QLLLVYE 752 (799)
Q Consensus 677 ~f~~~~~lG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~----~~~lV~E 752 (799)
++...+.||+|+||+||+|++ +|+.||||+++.... ....+.+|+..+.+++|||||+++|+|.+++ ..|||||
T Consensus 4 ~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~-~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~E 81 (303)
T 3hmm_A 4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD 81 (303)
T ss_dssp GEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred EEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccch-hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEec
Confidence 355678999999999999998 589999999965422 1223345555667889999999999998754 6899999
Q ss_pred cCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 753 YMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 753 y~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
||++|+|.++|+.+ .++++....++.|+|+||+|||+
T Consensus 82 y~~~gsL~~~l~~~----------~l~~~~~~~i~~~ia~gl~ylH~ 118 (303)
T 3hmm_A 82 YHEHGSLFDYLNRY----------TVTVEGMIKLALSTASGLAHLHM 118 (303)
T ss_dssp CCTTCBHHHHHHHC----------CBCHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCcHHHHHHhC----------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999864 34566777789999999999995
No 123
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.73 E-value=7.6e-18 Score=196.09 Aligned_cols=170 Identities=23% Similarity=0.349 Sum_probs=89.4
Q ss_pred CCCCCCEEEeeCCcCCCCCCccccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccCCcCCCcCCccccCCCCCCEE
Q 003737 161 NITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKL 240 (799)
Q Consensus 161 ~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 240 (799)
.|++|+.|++++|.+.. +| .+..+++|++|+|++|++++..| +..+++|+.|+|++|.+++ +| .+..+++|++|
T Consensus 41 ~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L 114 (605)
T 1m9s_A 41 ELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSL 114 (605)
T ss_dssp HHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEE
T ss_pred cCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEE
Confidence 34444444444444432 22 24444444444444444443222 4444444444444444442 11 34444444555
Q ss_pred EccCCCCCCCCchhhhcCCCCCeEEcCCCCCCCCCCCccCC-CCccEEEccCCcCcccCCccccCCCCCCeeccccccCC
Q 003737 241 HIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDK-MNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLT 319 (799)
Q Consensus 241 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~l~~-~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 319 (799)
+|++|.+++. +.+..+++|+.|+|++|.+... +.+.. .+|+.|+|++|.+++..| +..+++|+.|+|++|+|+
T Consensus 115 ~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~ 188 (605)
T 1m9s_A 115 SLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHIS 188 (605)
T ss_dssp ECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred EecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCC
Confidence 5544444431 2344444444444444332221 22333 456666666677766555 777778888888888777
Q ss_pred CCCchhhhccCCCCEEeccCCcCCC
Q 003737 320 GGIPTTFEKLAKTNFMYLTGNKLTG 344 (799)
Q Consensus 320 ~~~p~~~~~l~~L~~L~L~~N~l~g 344 (799)
+. ..+..+++|+.|+|++|++++
T Consensus 189 ~l--~~l~~l~~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 189 DL--RALAGLKNLDVLELFSQECLN 211 (605)
T ss_dssp BC--GGGTTCTTCSEEECCSEEEEC
T ss_pred CC--hHHccCCCCCEEEccCCcCcC
Confidence 53 357777788888888887774
No 124
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.73 E-value=1.8e-19 Score=210.81 Aligned_cols=251 Identities=13% Similarity=0.073 Sum_probs=124.6
Q ss_pred ccEEEEEeCCCCCccc----CCccccCCCCCCEEEccCCcCCCc----Ccccccccc-eeEEEccCCcCcCcCCcccCCC
Q 003737 92 CHVVTIALKAQNLTGT----LPTELSKLRYLKQLDLSRNCLTGS----FSPQWASLQ-LVELSVMGNRLSGPFPKVLTNI 162 (799)
Q Consensus 92 ~~v~~L~L~~~~l~g~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L 162 (799)
.++++|+|+++.+++. ++..+..+++|++|+|++|.+++. ++..+..++ |++|++++|.+.+ +|..+.++
T Consensus 164 ~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~ 242 (592)
T 3ogk_B 164 RKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAA 242 (592)
T ss_dssp TTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHC
T ss_pred CCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhh
Confidence 3567777777766554 333445667777777777776632 233333444 7777777766553 33444444
Q ss_pred CCCCEEEe---------------------------eCCcCCCCCCccccCCCCCCEEEcccCcCCccCC-hhccCCCCCC
Q 003737 163 TTLKNLSI---------------------------EGNLFTGSIPPDIRKLINLQKLILSSNSFTGELP-AELTKLTNLN 214 (799)
Q Consensus 163 ~~L~~L~L---------------------------s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~ 214 (799)
++|++|++ +++. .+.+|..+..+++|++|+|++|.+++... ..+..+++|+
T Consensus 243 ~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~-~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~ 321 (592)
T 3ogk_B 243 ANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMG-PNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLE 321 (592)
T ss_dssp TTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCC-TTTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCC
T ss_pred hHHHhhcccccccccchHHHHHHhhccccccccCccccc-hhHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCC
Confidence 44444444 3322 23455556677788888888887664332 3356667777
Q ss_pred EEEccCCcCCCcCCccccCCCCCCEEEcc-----------CCCCCCC-CchhhhcCCCCCeEEcCCCCCCCCCCCccCC-
Q 003737 215 DLRISDNNFSGKIPEFIGKWKKIQKLHIQ-----------GSSLEGP-IPASISALTSLTDLRISDLKGSESAFPKLDK- 281 (799)
Q Consensus 215 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~-----------~N~l~~~-~p~~~~~l~~L~~L~L~~n~~~~~~~~~l~~- 281 (799)
+|+++++...+.++..+..+++|++|+|+ .|.+++. ++.....+++|++|+++.++.....+..+..
T Consensus 322 ~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~ 401 (592)
T 3ogk_B 322 VLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTY 401 (592)
T ss_dssp EEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHH
T ss_pred EEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhh
Confidence 77776332222233333455666666666 2444432 1222334556666665443332221212211
Q ss_pred -CCccEEEcc----CCcCccc-----CCccccCCCCCCeeccccc--cCCCCCchhhhc-cCCCCEEeccCCcCCC
Q 003737 282 -MNLKTLILT----KCLIHGE-----IPDYIGDMTKLKNIDLSFN--NLTGGIPTTFEK-LAKTNFMYLTGNKLTG 344 (799)
Q Consensus 282 -~~L~~L~L~----~N~l~~~-----~p~~l~~l~~L~~L~Ls~N--~l~~~~p~~~~~-l~~L~~L~L~~N~l~g 344 (799)
++|+.|+++ .|.+++. ++..+..+++|+.|++++| .+++..+..+.. +++|+.|++++|++++
T Consensus 402 ~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~ 477 (592)
T 3ogk_B 402 LKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESD 477 (592)
T ss_dssp CCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSH
T ss_pred CCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCH
Confidence 345555553 3444432 2222334455555555432 244333333322 4445555555555443
No 125
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.72 E-value=7.2e-17 Score=164.89 Aligned_cols=147 Identities=19% Similarity=0.212 Sum_probs=117.9
Q ss_pred CEEEccCCcCCCcCcccccccceeEEEccCCcCcCcCCcccCCCCCCCEEEeeCCcCCCCCCccccCCCCCCEEEcccCc
Q 003737 119 KQLDLSRNCLTGSFSPQWASLQLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNS 198 (799)
Q Consensus 119 ~~L~Ls~N~l~~~~p~~~~~l~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 198 (799)
+.++.+++.++..+. .+. ..|++|+|++|++++..|..|.++++|++|+|++|+++...+..|..+++|++|+|++|+
T Consensus 22 ~~v~c~~~~l~~ip~-~~~-~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~ 99 (229)
T 3e6j_A 22 TTVDCRSKRHASVPA-GIP-TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQ 99 (229)
T ss_dssp TEEECTTSCCSSCCS-CCC-TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CEeEccCCCcCccCC-CCC-CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCc
Confidence 457888888875543 222 338899999999998888888899999999999999876555667889999999999999
Q ss_pred CCccCChhccCCCCCCEEEccCCcCCCcCCccccCCCCCCEEEccCCCCCCCCchhhhcCCCCCeEEcCC
Q 003737 199 FTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISD 268 (799)
Q Consensus 199 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 268 (799)
+++..+..|..+++|++|+|++|+++ .+|..+..+++|++|+|++|++++..+..+..+++|+.|++++
T Consensus 100 l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 168 (229)
T 3e6j_A 100 LTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFG 168 (229)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred CCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeC
Confidence 98766777888899999999999988 6788888888999999999988876666677777766666655
No 126
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.71 E-value=5.5e-19 Score=206.64 Aligned_cols=273 Identities=15% Similarity=0.117 Sum_probs=191.6
Q ss_pred cEEEEEeCCCC-Ccc-cCCccccCCCCCCEEEccCCcCCCc----Ccccccccc-eeEEEccCCcCcC----cCCcccCC
Q 003737 93 HVVTIALKAQN-LTG-TLPTELSKLRYLKQLDLSRNCLTGS----FSPQWASLQ-LVELSVMGNRLSG----PFPKVLTN 161 (799)
Q Consensus 93 ~v~~L~L~~~~-l~g-~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~-L~~L~Ls~N~l~~----~~p~~~~~ 161 (799)
++++|+|+++. ++. .++..+..+++|++|+|++|.+++. ++.....++ |++|++++|.+++ .++..+.+
T Consensus 139 ~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~ 218 (592)
T 3ogk_B 139 DLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARN 218 (592)
T ss_dssp GCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHH
T ss_pred cCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhh
Confidence 49999999876 221 2333345789999999999998766 333445555 9999999999973 44556678
Q ss_pred CCCCCEEEeeCCcCCCCCCccccCCCCCCEEEcccCcCC---ccCChhccCCCCCCEEEccCCcCCCcCCccccCCCCCC
Q 003737 162 ITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFT---GELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQ 238 (799)
Q Consensus 162 L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~---~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 238 (799)
+++|++|+|++|.+.+ +|..+..+++|++|+++.+... +..+..+..+++|+.|+++++.. +.+|..+..+++|+
T Consensus 219 ~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~-~~l~~~~~~~~~L~ 296 (592)
T 3ogk_B 219 CRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGP-NEMPILFPFAAQIR 296 (592)
T ss_dssp CTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCT-TTGGGGGGGGGGCC
T ss_pred CCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccch-hHHHHHHhhcCCCc
Confidence 9999999999999885 6788889999999999864333 33445677788888888887643 46777888888899
Q ss_pred EEEccCCCCCCCCc-hhhhcCCCCCeEEcCCCCCCCCCCCcc-CC-CCccEEEccC-----------CcCccc-CCcccc
Q 003737 239 KLHIQGSSLEGPIP-ASISALTSLTDLRISDLKGSESAFPKL-DK-MNLKTLILTK-----------CLIHGE-IPDYIG 303 (799)
Q Consensus 239 ~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~n~~~~~~~~~l-~~-~~L~~L~L~~-----------N~l~~~-~p~~l~ 303 (799)
+|+|++|.+++... ..+..+++|+.|++++ +.....++.+ .. ++|+.|++++ |.++.. ++....
T Consensus 297 ~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~-~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~ 375 (592)
T 3ogk_B 297 KLDLLYALLETEDHCTLIQKCPNLEVLETRN-VIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQ 375 (592)
T ss_dssp EEEETTCCCCHHHHHHHHTTCTTCCEEEEEG-GGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHH
T ss_pred EEecCCCcCCHHHHHHHHHhCcCCCEEeccC-ccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHh
Confidence 99998888765443 3467788888888873 4433334433 22 5788888883 555543 222244
Q ss_pred CCCCCCeeccccccCCCCCchhhhc-cCCCCEEecc----CCcCCCc-----CChhh--hcCCCEEEeecC--cCcccC
Q 003737 304 DMTKLKNIDLSFNNLTGGIPTTFEK-LAKTNFMYLT----GNKLTGP-----VPKYI--FNSNKNVDISLN--NFTWES 368 (799)
Q Consensus 304 ~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~L~----~N~l~g~-----~p~~~--~~~l~~l~ls~N--~~~g~~ 368 (799)
.+++|++|+++.|++++..+..+.. +++|+.|+++ .|.+++. ++..+ ...++.|+++++ .+++..
T Consensus 376 ~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~ 454 (592)
T 3ogk_B 376 GCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLG 454 (592)
T ss_dssp HCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHH
T ss_pred hCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHH
Confidence 5788888888888888777766665 7888888885 6677753 22112 346778888743 355443
No 127
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.71 E-value=4.5e-17 Score=162.30 Aligned_cols=155 Identities=19% Similarity=0.303 Sum_probs=99.8
Q ss_pred CCCCCCCEEEeeCCcCCCCCCccccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccCCcCCCcCCccccCCCCCCE
Q 003737 160 TNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQK 239 (799)
Q Consensus 160 ~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 239 (799)
+.+++|++|++++|.++ .+| .+..+++|++|++++|.++ .+..+..+++|++|++++|++++..|..+..+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 45667777777777776 445 5677777777777777554 2345777777777777777777666777777777777
Q ss_pred EEccCCCCCCCCchhhhcCCCCCeEEcCCCCCCCCCCCccCCCCccEEEccCCcCcccCCccccCCCCCCeeccccccCC
Q 003737 240 LHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLT 319 (799)
Q Consensus 240 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~l~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 319 (799)
|+|++|.+++..|..+..+++|++|++++|.. ++ .+| .+..+++|+.|++++|+++
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~----------------------i~-~~~-~l~~l~~L~~L~l~~n~i~ 172 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGA----------------------IT-DIM-PLKTLPELKSLNIQFDGVH 172 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTB----------------------CC-CCG-GGGGCSSCCEEECTTBCCC
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCC----------------------cc-ccH-hhcCCCCCCEEECCCCCCc
Confidence 77777777766666676666666555554321 11 223 3556667777777777776
Q ss_pred CCCchhhhccCCCCEEeccCCcCCC
Q 003737 320 GGIPTTFEKLAKTNFMYLTGNKLTG 344 (799)
Q Consensus 320 ~~~p~~~~~l~~L~~L~L~~N~l~g 344 (799)
+ ++ .+..+++|+.|++++|++.+
T Consensus 173 ~-~~-~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 173 D-YR-GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp C-CT-TGGGCSSCCEEEECBC----
T ss_pred C-hH-HhccCCCCCEEEeeCcccCC
Confidence 4 33 56677777777777777653
No 128
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.70 E-value=2.7e-17 Score=190.42 Aligned_cols=117 Identities=19% Similarity=0.339 Sum_probs=105.5
Q ss_pred hcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccChhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEEec
Q 003737 675 TNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEY 753 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 753 (799)
.++|+..+.||+|+||.||+|.. .+|+.||+|++........+.+.+|+++|++++|||||++++++.+.+..|+||||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 35788899999999999999995 57999999999876666677899999999999999999999999999999999999
Q ss_pred CCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 754 MKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 754 ~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
|++|+|.++|..+.. .+++.+++.|+.||+.||+|||+
T Consensus 236 ~~gg~L~~~i~~~~~--------~l~e~~~~~~~~qi~~al~ylH~ 273 (573)
T 3uto_A 236 MSGGELFEKVADEHN--------KMSEDEAVEYMRQVCKGLCHMHE 273 (573)
T ss_dssp CCCCBHHHHHTCTTS--------CEEHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCcHHHHHHHhCC--------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999975432 57788999999999999999994
No 129
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=99.70 E-value=2.6e-17 Score=181.54 Aligned_cols=114 Identities=12% Similarity=0.313 Sum_probs=99.3
Q ss_pred cCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccC--hhhHHHHHHHHHHHHhCCCCcccceeEEEEEC------CE
Q 003737 676 NNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVEG------NQ 746 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~------~~ 746 (799)
++|+..+.||+|+||+||+|.. .+|+.||||+++... ....+.+.+|+++|++++|||||++++++... +.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 5688899999999999999995 579999999997542 33456789999999999999999999997643 57
Q ss_pred EEEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 747 LLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 747 ~~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
.|||||||+ |+|.+++...+ .+++.+++.|+.||+.||+|||+
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~~---------~l~~~~~~~~~~qil~al~ylH~ 176 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSSQ---------PLTLEHVRYFLYQLLRGLKYMHS 176 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSSS---------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCC-CCHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 899999996 78999998765 68899999999999999999994
No 130
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.70 E-value=7.1e-17 Score=160.84 Aligned_cols=149 Identities=17% Similarity=0.248 Sum_probs=88.7
Q ss_pred cCCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEEEeeCCcCCCCCCccccCCCCCCE
Q 003737 113 SKLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQK 191 (799)
Q Consensus 113 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 191 (799)
..+++|++|++++|.++. +| .+..++ |++|++++|.++ .+..+..+++|++|++++|.+++..|..+..+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVTD-LT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCSC-CT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCccC-hH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 445566666666666653 22 344444 666666666443 2235666666666666666666555666666666666
Q ss_pred EEcccCcCCccCChhccCCCCCCEEEccCCc-CCCcCCccccCCCCCCEEEccCCCCCCCCchhhhcCCCCCeEEcCCC
Q 003737 192 LILSSNSFTGELPAELTKLTNLNDLRISDNN-FSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDL 269 (799)
Q Consensus 192 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n 269 (799)
|++++|++++..|..+..+++|++|++++|. ++ .+| .+..+++|++|++++|.+++. + .+..+++|+.|++++|
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~~-~-~l~~l~~L~~L~l~~N 191 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHDY-R-GIEDFPKLNQLYAFSQ 191 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCCC-T-TGGGCSSCCEEEECBC
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcCh-H-HhccCCCCCEEEeeCc
Confidence 6666666666566666666666666666666 43 344 466666666666666666542 2 4555555555555553
No 131
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.69 E-value=1e-19 Score=210.54 Aligned_cols=188 Identities=18% Similarity=0.229 Sum_probs=110.4
Q ss_pred cCCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCc-------------CcCcCCcccCCCCCCCEEE-eeCCcCCC
Q 003737 113 SKLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNR-------------LSGPFPKVLTNITTLKNLS-IEGNLFTG 177 (799)
Q Consensus 113 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~-------------l~~~~p~~~~~L~~L~~L~-Ls~N~l~~ 177 (799)
..+++|+.|+|++|+++ .+|..++.++ |++|++++|. +.+.+|..++++++|+.|+ ++.|.+
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~-- 422 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYL-- 422 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHH--
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhccc--
Confidence 56788888888888886 5677788776 8888887664 4455555666666666665 444432
Q ss_pred CCCccccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccCCcCCCcCCccccCCCCCCEEEccCCCCCCCCchhhhc
Q 003737 178 SIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISA 257 (799)
Q Consensus 178 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 257 (799)
.+|+.+.+++|.++. +|. ..|+.|+|++|++++ +|. |+.+++|+.|+|++|.++ .+|..++.
T Consensus 423 ---------~~L~~l~l~~n~i~~-l~~-----~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~ 484 (567)
T 1dce_A 423 ---------DDLRSKFLLENSVLK-MEY-----ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAA 484 (567)
T ss_dssp ---------HHHHHHHHHHHHHHH-HHH-----TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGG
T ss_pred ---------chhhhhhhhcccccc-cCc-----cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhc
Confidence 123333344444442 111 136677777777764 454 667777777777777776 56666666
Q ss_pred CCCCCeEEcCCCCCCCCCCCccCCCCccEEEccCCcCcccCCccccCCCCCCeeccccccCCCCC-chhhhccCCCCEEe
Q 003737 258 LTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGI-PTTFEKLAKTNFMY 336 (799)
Q Consensus 258 l~~L~~L~L~~n~~~~~~~~~l~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~ 336 (799)
+++|+.|+|++ |.|++ +| .++.+++|+.|+|++|+|++.. |..|..+++|+.|+
T Consensus 485 l~~L~~L~Ls~-----------------------N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~ 539 (567)
T 1dce_A 485 LRCLEVLQASD-----------------------NALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLN 539 (567)
T ss_dssp CTTCCEEECCS-----------------------SCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEE
T ss_pred CCCCCEEECCC-----------------------CCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEE
Confidence 66655555544 33332 33 4445555555555555555444 55555555555555
Q ss_pred ccCCcCCCcC
Q 003737 337 LTGNKLTGPV 346 (799)
Q Consensus 337 L~~N~l~g~~ 346 (799)
|++|++++..
T Consensus 540 L~~N~l~~~~ 549 (567)
T 1dce_A 540 LQGNSLCQEE 549 (567)
T ss_dssp CTTSGGGGSS
T ss_pred ecCCcCCCCc
Confidence 5555555433
No 132
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.67 E-value=5.9e-17 Score=169.21 Aligned_cols=161 Identities=20% Similarity=0.322 Sum_probs=101.2
Q ss_pred cEEEEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEEEee
Q 003737 93 HVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLSIE 171 (799)
Q Consensus 93 ~v~~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls 171 (799)
+++.++++++.+++.. .+..+++|++|++++|.++.. + .+..++ |++|+|++|++++..+ +..+++|++|+|+
T Consensus 20 ~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~ 93 (263)
T 1xeu_A 20 NAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQSL-A-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVN 93 (263)
T ss_dssp HHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECC
T ss_pred HHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcccc-h-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECC
Confidence 3455666677766433 466777777777777777643 2 455555 7777777777765443 6777777777777
Q ss_pred CCcCCCCCCccccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccCCcCCCcCCccccCCCCCCEEEccCCCCCCCC
Q 003737 172 GNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPI 251 (799)
Q Consensus 172 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 251 (799)
+|++++ +|.. .. ++|++|++++|++++ ++ .+..+++|++|++++|++++. + .+..+++|++|+|++|++++.
T Consensus 94 ~N~l~~-l~~~-~~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~- 165 (263)
T 1xeu_A 94 RNRLKN-LNGI-PS-ACLSRLFLDNNELRD-TD-SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT- 165 (263)
T ss_dssp SSCCSC-CTTC-CC-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC-
T ss_pred CCccCC-cCcc-cc-CcccEEEccCCccCC-Ch-hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch-
Confidence 777764 3332 22 667777777777764 22 466777777777777777643 3 566667777777777776654
Q ss_pred chhhhcCCCCCeEEcCC
Q 003737 252 PASISALTSLTDLRISD 268 (799)
Q Consensus 252 p~~~~~l~~L~~L~L~~ 268 (799)
..+..+++|+.|++++
T Consensus 166 -~~l~~l~~L~~L~l~~ 181 (263)
T 1xeu_A 166 -GGLTRLKKVNWIDLTG 181 (263)
T ss_dssp -TTSTTCCCCCEEEEEE
T ss_pred -HHhccCCCCCEEeCCC
Confidence 4455555555555544
No 133
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.67 E-value=3.5e-16 Score=155.15 Aligned_cols=133 Identities=20% Similarity=0.265 Sum_probs=81.4
Q ss_pred EEEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCcCcccccccceeEEEccCCcCcCcCCcccCCCCCCCEEEeeCCc
Q 003737 95 VTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNL 174 (799)
Q Consensus 95 ~~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~ 174 (799)
+.+++++++++ .+|..+.. +|++|+|++|++++..+. ..|+.+++|++|+|++|.
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~----------------------~~~~~l~~L~~L~Ls~N~ 65 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSD----------------------GLFGRLPHLVKLELKRNQ 65 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCS----------------------CSGGGCTTCCEEECCSSC
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCc----------------------cccccCCCCCEEECCCCC
Confidence 45677777774 55554432 566666666555543332 135556666666666666
Q ss_pred CCCCCCccccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccCCcCCCcCCccccCCCCCCEEEccCCCCCCCCc
Q 003737 175 FTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIP 252 (799)
Q Consensus 175 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 252 (799)
+++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|..+++|++|+|++|.+++..+
T Consensus 66 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 66 LTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 665556666666666666666666666555556666666666666666666666666666666666666666665443
No 134
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.67 E-value=1.1e-16 Score=167.17 Aligned_cols=167 Identities=22% Similarity=0.331 Sum_probs=103.3
Q ss_pred eeEEEccCCcCcCcCCcccCCCCCCCEEEeeCCcCCCCCCccccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccC
Q 003737 141 LVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISD 220 (799)
Q Consensus 141 L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 220 (799)
++.+++++|.+++.. .+..+++|++|++++|.++ .+| .+..+++|++|+|++|++++..+ +.++++|++|++++
T Consensus 21 l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~ 94 (263)
T 1xeu_A 21 AVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNR 94 (263)
T ss_dssp HHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCS
T ss_pred HHHHHhcCCCccccc--chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCC
Confidence 555566666665432 4566677777777777766 344 56667777777777777764333 66777777777777
Q ss_pred CcCCCcCCccccCCCCCCEEEccCCCCCCCCchhhhcCCCCCeEEcCCCCCCCCCCCccCCCCccEEEccCCcCcccCCc
Q 003737 221 NNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPD 300 (799)
Q Consensus 221 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~l~~~~L~~L~L~~N~l~~~~p~ 300 (799)
|++++ +|... . ++|++|+|++|++++. + .+..+++|+. |+|++|++++. +
T Consensus 95 N~l~~-l~~~~-~-~~L~~L~L~~N~l~~~-~-~l~~l~~L~~-----------------------L~Ls~N~i~~~-~- 144 (263)
T 1xeu_A 95 NRLKN-LNGIP-S-ACLSRLFLDNNELRDT-D-SLIHLKNLEI-----------------------LSIRNNKLKSI-V- 144 (263)
T ss_dssp SCCSC-CTTCC-C-SSCCEEECCSSCCSBS-G-GGTTCTTCCE-----------------------EECTTSCCCBC-G-
T ss_pred CccCC-cCccc-c-CcccEEEccCCccCCC-h-hhcCcccccE-----------------------EECCCCcCCCC-h-
Confidence 77764 33322 2 6677777777776642 2 3444444444 44444555432 2
Q ss_pred cccCCCCCCeeccccccCCCCCchhhhccCCCCEEeccCCcCCCc
Q 003737 301 YIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGP 345 (799)
Q Consensus 301 ~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ 345 (799)
.+..+++|+.|+|++|++++. ..+..+++|+.|++++|++++.
T Consensus 145 ~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 145 MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 456667777777777777755 5567777777777777777744
No 135
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=99.66 E-value=1.5e-16 Score=183.53 Aligned_cols=115 Identities=20% Similarity=0.320 Sum_probs=98.3
Q ss_pred cCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccC---hhhHHHH---HHHHHHHHhCCCCcccceeEEEEECCEEE
Q 003737 676 NNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKS---RQGNREF---VNEIGMISAQQHPNLVKLYGCCVEGNQLL 748 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f---~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 748 (799)
++|+..++||+|+||+||+|+. .+|+.||||++++.. ....... ..++++++.++|||||++++++.+.+..|
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly 268 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 268 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence 5688899999999999999995 579999999996532 1122233 34466778889999999999999999999
Q ss_pred EEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 749 LVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 749 lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
+|||||++|+|.++|.+.+ .++|..++.|+.||+.||+|||+
T Consensus 269 lVmEy~~GGdL~~~l~~~~---------~l~E~~a~~y~~qIl~aL~yLH~ 310 (689)
T 3v5w_A 269 FILDLMNGGDLHYHLSQHG---------VFSEADMRFYAAEIILGLEHMHN 310 (689)
T ss_dssp EEECCCCSCBHHHHHHHHC---------CCCHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEecCCCCcHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998654 68899999999999999999996
No 136
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.65 E-value=4.4e-16 Score=154.44 Aligned_cols=111 Identities=25% Similarity=0.342 Sum_probs=81.5
Q ss_pred ccEEEEEeCCCCCcccCCc-cccCCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEEE
Q 003737 92 CHVVTIALKAQNLTGTLPT-ELSKLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLS 169 (799)
Q Consensus 92 ~~v~~L~L~~~~l~g~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~ 169 (799)
.+++.|++++|.+++..+. .|..+++|++|+|++|++++..|..|..+. |++|+|++|+|++..|..|.++++|++|+
T Consensus 29 ~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 108 (192)
T 1w8a_A 29 LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLN 108 (192)
T ss_dssp TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEE
T ss_pred CCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEE
Confidence 4799999999999977665 489999999999999998877776666665 66667666666666666666666666666
Q ss_pred eeCCcCCCCCCccccCCCCCCEEEcccCcCCcc
Q 003737 170 IEGNLFTGSIPPDIRKLINLQKLILSSNSFTGE 202 (799)
Q Consensus 170 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 202 (799)
|++|++++..|..|..+++|++|+|++|.+++.
T Consensus 109 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 141 (192)
T 1w8a_A 109 LYDNQISCVMPGSFEHLNSLTSLNLASNPFNCN 141 (192)
T ss_dssp CCSSCCCEECTTSSTTCTTCCEEECTTCCBCCS
T ss_pred CCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCc
Confidence 666666666666666666666666666666544
No 137
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=99.65 E-value=3.1e-16 Score=171.01 Aligned_cols=113 Identities=17% Similarity=0.314 Sum_probs=99.4
Q ss_pred HhhcCCCCCCeecccCCeeEEEEEe----CCCcEEEEEEccccChhhHHHHHHHHHHHHhC-CCCcccceeEEEEECCEE
Q 003737 673 AATNNFDPANKVGEGGFGSVYKGIL----SDGTVIAVKQLSSKSRQGNREFVNEIGMISAQ-QHPNLVKLYGCCVEGNQL 747 (799)
Q Consensus 673 ~~t~~f~~~~~lG~G~~g~Vy~~~~----~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~ 747 (799)
...+.|+..+.||+|+||+||+|+. .+++.||||++.... ....+.+|++++.++ +|||||++++++.+.+..
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~ 95 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHV 95 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEE
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEE
Confidence 3567899999999999999999974 246899999986543 345788999999998 699999999999999999
Q ss_pred EEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 748 LLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 748 ~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
|+|||||++|+|.+++. .+++.+++.|+.||+.||+|||+
T Consensus 96 ~lvmE~~~g~~L~~~~~------------~l~~~~~~~~~~qll~al~ylH~ 135 (361)
T 4f9c_A 96 VIAMPYLEHESFLDILN------------SLSFQEVREYMLNLFKALKRIHQ 135 (361)
T ss_dssp EEEEECCCCCCHHHHHT------------TCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcccHHHHHc------------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999984 46788999999999999999995
No 138
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.65 E-value=3.1e-17 Score=195.56 Aligned_cols=120 Identities=27% Similarity=0.328 Sum_probs=63.4
Q ss_pred cccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEEEeeCCcCCCCCCccccCCCCCCEEEcccCcCCccCChhccCCC
Q 003737 133 SPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLT 211 (799)
Q Consensus 133 p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 211 (799)
+..+..+. |++|+|++|.+. .+|..+.++++|++|+|++|.|+ .+|..|++|++|++|+|++|+|+ .+|..|++|+
T Consensus 217 ~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~ 293 (727)
T 4b8c_D 217 KDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCF 293 (727)
T ss_dssp -----CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGT
T ss_pred hhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCC
Confidence 33344333 444444444444 34444445555555555555555 55555555555555555555555 4555555555
Q ss_pred CCCEEEccCCcCCCcCCccccCCCCCCEEEccCCCCCCCCchhhh
Q 003737 212 NLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASIS 256 (799)
Q Consensus 212 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 256 (799)
+|++|+|++|.|+ .+|..|+.+++|++|+|++|.+++.+|..+.
T Consensus 294 ~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 337 (727)
T 4b8c_D 294 QLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILT 337 (727)
T ss_dssp TCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHH
T ss_pred CCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHh
Confidence 5555555555554 4455555555666666666665555555543
No 139
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=99.64 E-value=8.2e-16 Score=165.49 Aligned_cols=128 Identities=24% Similarity=0.385 Sum_probs=109.9
Q ss_pred ccccccHHHHHHhhcC----------CCCCCeecccCCeeEEEEEeC-CCcEEEEEEccccChhhHHHHHHHHHHHHhCC
Q 003737 662 QTGLYTLRQIKAATNN----------FDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQ 730 (799)
Q Consensus 662 ~~~~~~~~~~~~~t~~----------f~~~~~lG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~ 730 (799)
+.+.++++++..+++. |+..+.||+|+||.||+|... +|+.||||++........+.+.+|++++.+++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~ 100 (321)
T 2c30_A 21 QSGVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQ 100 (321)
T ss_dssp ----CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCC
T ss_pred cCCcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCC
Confidence 3456788888777754 555678999999999999965 79999999997766666778999999999999
Q ss_pred CCcccceeEEEEECCEEEEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 731 HPNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 731 H~niv~l~g~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
||||+++++++...+..++||||+++|+|.+++... .+++..+..++.||++||+|||+
T Consensus 101 h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~----------~l~~~~~~~i~~qi~~~L~~LH~ 159 (321)
T 2c30_A 101 HFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV----------RLNEEQIATVCEAVLQALAYLHA 159 (321)
T ss_dssp CTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC----------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcceEEEEEEECCEEEEEEecCCCCCHHHHHHhc----------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998743 46788999999999999999994
No 140
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.63 E-value=1.1e-15 Score=147.88 Aligned_cols=131 Identities=21% Similarity=0.173 Sum_probs=86.1
Q ss_pred CCCCEEEccCCcCC-CcCcccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEEEeeCCcCCCCCCccccCCCCCCEEE
Q 003737 116 RYLKQLDLSRNCLT-GSFSPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLI 193 (799)
Q Consensus 116 ~~L~~L~Ls~N~l~-~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 193 (799)
++|++|+|++|.++ +.+|..+..++ |++|++++|.+++. ..+..+++|++|+|++|.+++.+|..+..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 56677777777666 45555555555 66666666666654 5666677777777777777665666666677777777
Q ss_pred cccCcCCccC-ChhccCCCCCCEEEccCCcCCCcCC---ccccCCCCCCEEEccCCCCC
Q 003737 194 LSSNSFTGEL-PAELTKLTNLNDLRISDNNFSGKIP---EFIGKWKKIQKLHIQGSSLE 248 (799)
Q Consensus 194 Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~L~~N~l~ 248 (799)
+++|.+++.. +..+..+++|++|++++|.+++..+ ..+..+++|++|++++|.+.
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 7777776431 2566677777777777777765444 36666777777777776665
No 141
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.63 E-value=4e-18 Score=197.21 Aligned_cols=188 Identities=12% Similarity=0.113 Sum_probs=125.4
Q ss_pred CCCCCCCEEEeeCCcCCCCCCccccCCCCCCEEEcccCc-------------CCccCChhccCCCCCCEEE-ccCCcCCC
Q 003737 160 TNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNS-------------FTGELPAELTKLTNLNDLR-ISDNNFSG 225 (799)
Q Consensus 160 ~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-------------l~~~~p~~~~~l~~L~~L~-Ls~N~l~~ 225 (799)
..+++|+.|+|++|+++ .+|..++++++|+.|++++|. +.+.+|..+..+++|+.|+ ++.|.+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~- 423 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD- 423 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH-
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc-
Confidence 44566666666666665 566666666666666665553 3444555555555555555 4444322
Q ss_pred cCCccccCCCCCCEEEccCCCCCCCCchhhhcCCCCCeEEcCCCCCCCCCCCccCC-CCccEEEccCCcCcccCCccccC
Q 003737 226 KIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDK-MNLKTLILTKCLIHGEIPDYIGD 304 (799)
Q Consensus 226 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~l~~-~~L~~L~L~~N~l~~~~p~~l~~ 304 (799)
+|+.+.+++|.++.. | ...|+.|++++|.+.. +|.+.. .+|+.|+|++|.|+ .+|..++.
T Consensus 424 ----------~L~~l~l~~n~i~~l-~-----~~~L~~L~Ls~n~l~~--lp~~~~l~~L~~L~Ls~N~l~-~lp~~~~~ 484 (567)
T 1dce_A 424 ----------DLRSKFLLENSVLKM-E-----YADVRVLHLAHKDLTV--LCHLEQLLLVTHLDLSHNRLR-ALPPALAA 484 (567)
T ss_dssp ----------HHHHHHHHHHHHHHH-H-----HTTCSEEECTTSCCSS--CCCGGGGTTCCEEECCSSCCC-CCCGGGGG
T ss_pred ----------hhhhhhhhccccccc-C-----ccCceEEEecCCCCCC--CcCccccccCcEeecCccccc-ccchhhhc
Confidence 111112222222210 0 0135555555543322 333444 56777788888888 78999999
Q ss_pred CCCCCeeccccccCCCCCchhhhccCCCCEEeccCCcCCCcC-Chhhh--cCCCEEEeecCcCcccCCC
Q 003737 305 MTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPV-PKYIF--NSNKNVDISLNNFTWESSD 370 (799)
Q Consensus 305 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~-p~~~~--~~l~~l~ls~N~~~g~~p~ 370 (799)
+++|+.|+|++|+|++ +| .++.+++|+.|+|++|+|++.. |..+. ..++.|+|++|.+++.+|.
T Consensus 485 l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 551 (567)
T 1dce_A 485 LRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGI 551 (567)
T ss_dssp CTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSC
T ss_pred CCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccH
Confidence 9999999999999997 67 8999999999999999999876 88775 4789999999999988764
No 142
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=99.62 E-value=2.7e-16 Score=176.07 Aligned_cols=125 Identities=19% Similarity=0.234 Sum_probs=107.6
Q ss_pred cHHHHHHhhcCCCCCCeecccCCeeEEEEEeC-CCcEEEEEEccccCh---hhHHHHHHHHHHHHhCCCCcccceeEEEE
Q 003737 667 TLRQIKAATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSR---QGNREFVNEIGMISAQQHPNLVKLYGCCV 742 (799)
Q Consensus 667 ~~~~~~~~t~~f~~~~~lG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~ 742 (799)
.+.+++..+++|+..+.||+|+||+||+|+.. +++.||||+++.... ...+.+.+|++++.+++|||||+++++|.
T Consensus 65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 144 (437)
T 4aw2_A 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ 144 (437)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence 45566667889999999999999999999965 588999999965321 12335899999999999999999999999
Q ss_pred ECCEEEEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 743 EGNQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 743 ~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
+.+..|+|||||++|+|.++++.... .+++..++.|+.||+.||+|||+
T Consensus 145 ~~~~~~lV~Ey~~gg~L~~~l~~~~~--------~l~e~~~~~~~~qi~~aL~~LH~ 193 (437)
T 4aw2_A 145 DDNNLYLVMDYYVGGDLLTLLSKFED--------RLPEEMARFYLAEMVIAIDSVHQ 193 (437)
T ss_dssp CSSEEEEEECCCTTCBHHHHHHTTTT--------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred eCCEEEEEEecCCCCcHHHHHHHccC--------CCCHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999986322 57899999999999999999994
No 143
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=99.62 E-value=1.3e-15 Score=162.79 Aligned_cols=116 Identities=22% Similarity=0.391 Sum_probs=103.9
Q ss_pred cCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccChhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEEecC
Q 003737 676 NNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYM 754 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 754 (799)
++|...+.||+|+||.||+|.. .+++.||+|++........+.|.+|++++.+++||||+++++++.+++..++||||+
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 89 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYI 89 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEec
Confidence 4577789999999999999995 468999999997766667789999999999999999999999999999999999999
Q ss_pred CCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 755 KNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 755 ~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
++|+|.++++.... .+++..+..++.|+++||+|||+
T Consensus 90 ~~~~L~~~l~~~~~--------~~~~~~~~~i~~qi~~al~~lH~ 126 (310)
T 3s95_A 90 KGGTLRGIIKSMDS--------QYPWSQRVSFAKDIASGMAYLHS 126 (310)
T ss_dssp TTCBHHHHHHHCCT--------TSCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHhccC--------CCCHHHHHHHHHHHHHHHHHHHh
Confidence 99999999986432 57788888999999999999994
No 144
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=99.62 E-value=1.9e-15 Score=160.74 Aligned_cols=115 Identities=21% Similarity=0.485 Sum_probs=103.7
Q ss_pred hcCCCCCCeecccCCeeEEEEE-eCCCcEEEEEEccccChhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEEec
Q 003737 675 TNNFDPANKVGEGGFGSVYKGI-LSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEY 753 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 753 (799)
.++|+..+.||+|+||.||+|. ..+|+.||||++........+.+.+|+.++.+++|||||++++++...+..++||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 4578899999999999999999 467899999999766555567899999999999999999999999999999999999
Q ss_pred CCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 754 MKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 754 ~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
+++|+|.+++... .+++..+..++.|++.||+|||+
T Consensus 99 ~~~~~L~~~~~~~----------~~~~~~~~~~~~qi~~~l~~lH~ 134 (297)
T 3fxz_A 99 LAGGSLTDVVTET----------CMDEGQIAAVCRECLQALEFLHS 134 (297)
T ss_dssp CTTCBHHHHHHHS----------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHhhc----------CCCHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999754 46788999999999999999994
No 145
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=99.62 E-value=4.5e-16 Score=167.39 Aligned_cols=129 Identities=37% Similarity=0.615 Sum_probs=111.6
Q ss_pred ccHHHHHHhhcCCCCCCeecccCCeeEEEEEeCCCcEEEEEEccccChhhHHHHHHHHHHHHhCCCCcccceeEEEEECC
Q 003737 666 YTLRQIKAATNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGN 745 (799)
Q Consensus 666 ~~~~~~~~~t~~f~~~~~lG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~ 745 (799)
+++.++..++++|+..+.||+|+||.||+|...+|+.||||++........+.+.+|++++.+++||||+++++++.+.+
T Consensus 29 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 108 (321)
T 2qkw_B 29 VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERN 108 (321)
T ss_dssp -CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTT
T ss_pred ecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC
Confidence 33445556788999999999999999999998889999999998766666788999999999999999999999999999
Q ss_pred EEEEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 746 QLLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 746 ~~~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
..++||||+++|+|.+++...... ...+++..+..++.||++||+|||+
T Consensus 109 ~~~lv~e~~~~~~L~~~l~~~~~~-----~~~~~~~~~~~i~~~i~~~l~~lH~ 157 (321)
T 2qkw_B 109 EMILIYKYMENGNLKRHLYGSDLP-----TMSMSWEQRLEICIGAARGLHYLHT 157 (321)
T ss_dssp CCEEEEECCTTCBTGGGSSSSCCC-----SCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEcCCCCcHHHHHhccCCC-----ccccCHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999754321 1247788888999999999999994
No 146
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.62 E-value=7.6e-16 Score=145.92 Aligned_cols=126 Identities=25% Similarity=0.263 Sum_probs=99.2
Q ss_pred eeEEEccCCcCc-CcCCcccCCCCCCCEEEeeCCcCCCCCCccccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEcc
Q 003737 141 LVELSVMGNRLS-GPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRIS 219 (799)
Q Consensus 141 L~~L~Ls~N~l~-~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 219 (799)
+++|++++|.++ +.+|..+..+++|++|++++|.+++. ..+..+++|++|++++|.+++.+|..+..+++|++|+++
T Consensus 19 l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls 96 (149)
T 2je0_A 19 VKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLS 96 (149)
T ss_dssp CSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEECT
T ss_pred CeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEECC
Confidence 677777777776 67777778888888888888888755 667888888888888888887777777778888888888
Q ss_pred CCcCCCc-CCccccCCCCCCEEEccCCCCCCCCc---hhhhcCCCCCeEEcCC
Q 003737 220 DNNFSGK-IPEFIGKWKKIQKLHIQGSSLEGPIP---ASISALTSLTDLRISD 268 (799)
Q Consensus 220 ~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~L~~ 268 (799)
+|++++. .+..+..+++|++|++++|.+++..+ ..+..+++|+.|++++
T Consensus 97 ~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 97 GNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp TSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred CCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 8888763 34778888888888888888887665 5788888888887753
No 147
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=99.61 E-value=8.5e-16 Score=165.47 Aligned_cols=131 Identities=34% Similarity=0.603 Sum_probs=113.3
Q ss_pred ccccHHHHHHhhcCCCCCCeecccCCeeEEEEEeCCCcEEEEEEccccCh-hhHHHHHHHHHHHHhCCCCcccceeEEEE
Q 003737 664 GLYTLRQIKAATNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSR-QGNREFVNEIGMISAQQHPNLVKLYGCCV 742 (799)
Q Consensus 664 ~~~~~~~~~~~t~~f~~~~~lG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~ 742 (799)
..+++.++...+++|+..+.||+|+||.||+|...+|+.||||++..... .....|.+|++++.+++||||+++++++.
T Consensus 18 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 97 (326)
T 3uim_A 18 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 97 (326)
T ss_dssp EECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEEC
T ss_pred ceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEe
Confidence 46888999999999999999999999999999987899999999976532 22347999999999999999999999999
Q ss_pred ECCEEEEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 743 EGNQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 743 ~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
..+..++||||+++|+|.++++..... ...+++..+..++.|++.||+|||+
T Consensus 98 ~~~~~~lv~e~~~~~~L~~~l~~~~~~-----~~~~~~~~~~~i~~~i~~~l~~lH~ 149 (326)
T 3uim_A 98 TPTERLLVYPYMANGSVASCLRERPES-----QPPLDWPKRQRIALGSARGLAYLHD 149 (326)
T ss_dssp CSSCCEEEEECCTTCBHHHHHHCCSTT-----CCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCceEEEEEeccCCCHHHHHHhcccc-----CCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999865421 1247788899999999999999994
No 148
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=99.61 E-value=1.4e-15 Score=164.02 Aligned_cols=116 Identities=16% Similarity=0.304 Sum_probs=103.7
Q ss_pred hcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEcccc--ChhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEE
Q 003737 675 TNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSK--SRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 751 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 751 (799)
.++|...+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 46788899999999999999995 68999999999654 3344567999999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 752 EYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 752 Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
||+++|+|.+++...+ .+++..++.++.||++||+|||+
T Consensus 94 e~~~~~~L~~~l~~~~---------~l~~~~~~~~~~qi~~al~~lH~ 132 (328)
T 3fe3_A 94 EYASGGEVFDYLVAHG---------RMKEKEARSKFRQIVSAVQYCHQ 132 (328)
T ss_dssp CCCTTCBHHHHHHHHC---------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ECCCCCcHHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999997654 57888999999999999999994
No 149
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.61 E-value=1.7e-15 Score=146.65 Aligned_cols=129 Identities=24% Similarity=0.244 Sum_probs=113.4
Q ss_pred eeEEEccCCcCc-CcCCcccCCCCCCCEEEeeCCcCCCCCCccccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEcc
Q 003737 141 LVELSVMGNRLS-GPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRIS 219 (799)
Q Consensus 141 L~~L~Ls~N~l~-~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 219 (799)
|++|++++|.++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|++++|++++.+|..+..+++|++|+++
T Consensus 26 L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 103 (168)
T 2ell_A 26 VRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLS 103 (168)
T ss_dssp CSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECB
T ss_pred CCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEecc
Confidence 999999999998 78898899999999999999999865 788999999999999999998788888889999999999
Q ss_pred CCcCCCcC-CccccCCCCCCEEEccCCCCCCCCc---hhhhcCCCCCeEEcCCCCC
Q 003737 220 DNNFSGKI-PEFIGKWKKIQKLHIQGSSLEGPIP---ASISALTSLTDLRISDLKG 271 (799)
Q Consensus 220 ~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~L~~n~~ 271 (799)
+|++++.. +..+..+++|++|++++|.+++..+ ..+..+++|+.|++++|..
T Consensus 104 ~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~ 159 (168)
T 2ell_A 104 GNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDRED 159 (168)
T ss_dssp SSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTS
T ss_pred CCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCCh
Confidence 99998643 2788999999999999999987665 5788888888888877544
No 150
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.60 E-value=9.3e-16 Score=145.30 Aligned_cols=126 Identities=22% Similarity=0.213 Sum_probs=80.3
Q ss_pred CCCCEEEccCCcCC-CcCcccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEEEeeCCcCCCCCCccccCCCCCCEEE
Q 003737 116 RYLKQLDLSRNCLT-GSFSPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLI 193 (799)
Q Consensus 116 ~~L~~L~Ls~N~l~-~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 193 (799)
++|++|++++|.++ +.+|..+..++ |++|++++|.+++. ..++.+++|++|+|++|.+++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 34455555555554 34444444444 55555555555544 5566677777777777777766666666677777777
Q ss_pred cccCcCCcc-CChhccCCCCCCEEEccCCcCCCcCC---ccccCCCCCCEEEcc
Q 003737 194 LSSNSFTGE-LPAELTKLTNLNDLRISDNNFSGKIP---EFIGKWKKIQKLHIQ 243 (799)
Q Consensus 194 Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~L~ 243 (799)
+++|.+++. .+..+..+++|++|++++|.+++..+ ..+..+++|++|+++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 777777752 33667777777777777777776554 467777777777765
No 151
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=99.59 E-value=2.8e-15 Score=163.84 Aligned_cols=117 Identities=18% Similarity=0.304 Sum_probs=103.1
Q ss_pred hhcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccChh------hHHHHHHHHHHHHhCCCCcccceeEEEEECCE
Q 003737 674 ATNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSRQ------GNREFVNEIGMISAQQHPNLVKLYGCCVEGNQ 746 (799)
Q Consensus 674 ~t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~------~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~ 746 (799)
..+.|...+.||+|+||.||+|.. .+|+.||||.++..... ..+.+.+|++++.+++|||||++++++.+.+.
T Consensus 10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 89 (361)
T 2yab_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTD 89 (361)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCE
Confidence 345688889999999999999995 47899999999754321 35789999999999999999999999999999
Q ss_pred EEEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 747 LLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 747 ~~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
.++||||+++|+|.+++.... .+++..+..++.||+.||+|||+
T Consensus 90 ~~lv~e~~~gg~L~~~l~~~~---------~l~~~~~~~i~~qi~~aL~~LH~ 133 (361)
T 2yab_A 90 VVLILELVSGGELFDFLAQKE---------SLSEEEATSFIKQILDGVNYLHT 133 (361)
T ss_dssp EEEEEECCCSCBHHHHHTTCS---------CCBHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEcCCCCcHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999997654 57888999999999999999994
No 152
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.59 E-value=1.9e-15 Score=164.25 Aligned_cols=117 Identities=16% Similarity=0.324 Sum_probs=102.7
Q ss_pred hhcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccC-hhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEE
Q 003737 674 ATNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 751 (799)
Q Consensus 674 ~t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 751 (799)
..++|+..+.||+|+||+||+|.. .+|+.||||++.... ....+.+.+|++++.+++||||+++++++.+.+..++||
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 87 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVL 87 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEE
Confidence 456788899999999999999994 679999999996643 223457899999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 752 EYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 752 Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
||+++|+|.+++.... .+++..++.++.||++||+|||+
T Consensus 88 E~~~gg~L~~~l~~~~---------~l~~~~~~~i~~qi~~aL~~LH~ 126 (347)
T 3zgw_A 88 EYCPGGELFDYIISQD---------RLSEEETRVVFRQIVSAVAYVHS 126 (347)
T ss_dssp ECCTTCBHHHHHHHHS---------SCCHHHHHHHHHHHHHHHHHHHH
T ss_pred eCCCCCCHHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999997654 57888999999999999999994
No 153
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=99.59 E-value=6.4e-15 Score=157.08 Aligned_cols=129 Identities=36% Similarity=0.546 Sum_probs=112.0
Q ss_pred ccccHHHHHHhhcCCCCC------CeecccCCeeEEEEEeCCCcEEEEEEccccC----hhhHHHHHHHHHHHHhCCCCc
Q 003737 664 GLYTLRQIKAATNNFDPA------NKVGEGGFGSVYKGILSDGTVIAVKQLSSKS----RQGNREFVNEIGMISAQQHPN 733 (799)
Q Consensus 664 ~~~~~~~~~~~t~~f~~~------~~lG~G~~g~Vy~~~~~~g~~vAvK~l~~~~----~~~~~~f~~E~~~l~~l~H~n 733 (799)
..|++.++..++++|+.. +.||+|+||.||+|.. +++.||||++.... ....+.|.+|++++.+++|||
T Consensus 13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 91 (307)
T 2nru_A 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91 (307)
T ss_dssp EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence 468999999999999988 8999999999999986 58899999986532 234578999999999999999
Q ss_pred ccceeEEEEECCEEEEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 734 LVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 734 iv~l~g~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
|+++++++.+.+..++||||+++|+|.+++...... ..+++..+..++.||++||+|||+
T Consensus 92 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~------~~~~~~~~~~i~~~i~~~l~~lH~ 151 (307)
T 2nru_A 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT------PPLSWHMRCKIAQGAANGINFLHE 151 (307)
T ss_dssp BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGC------CCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCC------CCCCHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999753221 146788888899999999999994
No 154
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.59 E-value=5.7e-15 Score=146.48 Aligned_cols=127 Identities=23% Similarity=0.278 Sum_probs=73.1
Q ss_pred EEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCcCcccccccceeEEEccCCcCcCcCCcccCCCCCCCEEEeeCCcC
Q 003737 96 TIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLF 175 (799)
Q Consensus 96 ~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l 175 (799)
.+++++++++ .+|..+. ++|++|+|++|+++ .+|..|.++++|++|+|++|.+
T Consensus 14 ~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~------------------------~ip~~~~~l~~L~~L~Ls~N~i 66 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT------------------------LVPKELSNYKHLTLIDLSNNRI 66 (193)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC------------------------SCCGGGGGCTTCCEEECCSSCC
T ss_pred EEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc------------------------hhHHHhhcccCCCEEECCCCcC
Confidence 5677777776 5555442 45666666666655 3444555555555555555555
Q ss_pred CCCCCccccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccCCcCCCcCCccccCCCCCCEEEccCCCCCC
Q 003737 176 TGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEG 249 (799)
Q Consensus 176 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 249 (799)
++..+..|.++++|++|+|++|++++..|..|..+++|++|+|++|+++...+..|..+++|+.|+|++|.+..
T Consensus 67 ~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 67 STLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 55444555555555555555555555555555555666666666666654444455556666666666665543
No 155
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=99.59 E-value=2e-15 Score=165.92 Aligned_cols=116 Identities=24% Similarity=0.436 Sum_probs=101.0
Q ss_pred cCCCCCCeecccCCeeEEEEEeC----CCcEEEEEEcccc-ChhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEE
Q 003737 676 NNFDPANKVGEGGFGSVYKGILS----DGTVIAVKQLSSK-SRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLV 750 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~~----~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 750 (799)
++|+..+.||+|+||.||+|+.. ++..||||+++.. .....+.|.+|++++.+++|||||++++++.+.+..++|
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 124 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEE
Confidence 46888999999999999999854 5778999999765 334457899999999999999999999999999999999
Q ss_pred EecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 751 YEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 751 ~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
|||+++|+|.++++.... .+++..+..++.||++||+|||+
T Consensus 125 ~e~~~~~sL~~~l~~~~~--------~~~~~~~~~i~~qi~~aL~~LH~ 165 (373)
T 2qol_A 125 TEYMENGSLDSFLRKHDA--------QFTVIQLVGMLRGIASGMKYLSD 165 (373)
T ss_dssp EECCTTCBHHHHHHTTTT--------CSCHHHHHHHHHHHHHHHHHHHH
T ss_pred EeCCCCCcHHHHHHhCCC--------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999986532 46788888999999999999994
No 156
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=99.59 E-value=2.1e-15 Score=163.27 Aligned_cols=115 Identities=21% Similarity=0.286 Sum_probs=102.2
Q ss_pred cCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEcccc---ChhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEE
Q 003737 676 NNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSK---SRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 751 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 751 (799)
++|+..+.||+|+||+||++.. .+|+.||+|+++.. .....+.+.+|++++.+++||||+++++++.+.+..++||
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 84 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence 5688889999999999999995 47899999999754 2234567899999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 752 EYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 752 Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
||+++|+|.+++...+ .+++..++.++.||+.||+|||+
T Consensus 85 E~~~gg~L~~~l~~~~---------~~~~~~~~~~~~qi~~aL~~LH~ 123 (337)
T 1o6l_A 85 EYANGGELFFHLSRER---------VFTEERARFYGAEIVSALEYLHS 123 (337)
T ss_dssp ECCTTCBHHHHHHHHS---------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred eCCCCCcHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999997654 57888999999999999999994
No 157
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.59 E-value=9.3e-17 Score=187.72 Aligned_cols=275 Identities=17% Similarity=0.174 Sum_probs=173.9
Q ss_pred ccEEEEEeCCC-CCccc-CCccccCCCCCCEEEccCCcCCCcCccccc----ccc-eeEEEccCCc--CcC-cCCcccCC
Q 003737 92 CHVVTIALKAQ-NLTGT-LPTELSKLRYLKQLDLSRNCLTGSFSPQWA----SLQ-LVELSVMGNR--LSG-PFPKVLTN 161 (799)
Q Consensus 92 ~~v~~L~L~~~-~l~g~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~----~l~-L~~L~Ls~N~--l~~-~~p~~~~~ 161 (799)
.++++|+|+++ .++.. ++..+..+++|++|+|++|.+++..+..+. .++ |++|++++|. ++. .++..+.+
T Consensus 130 ~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~l~~l~~~ 209 (594)
T 2p1m_B 130 KNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALERLVTR 209 (594)
T ss_dssp TTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCCSCCCHHHHHHHHHH
T ss_pred CCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccCCcCCHHHHHHHHHh
Confidence 47899999988 55433 444556889999999999998776554443 344 9999999987 221 12222345
Q ss_pred CCCCCEEEeeCCcCCCCCCccccCCCCCCEEEcccCc--------------------------CC----ccCChhccCCC
Q 003737 162 ITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNS--------------------------FT----GELPAELTKLT 211 (799)
Q Consensus 162 L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~--------------------------l~----~~~p~~~~~l~ 211 (799)
+++|++|+|++|...+.+|..+..+++|++|+++.+. +. +.++..+..++
T Consensus 210 ~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~~~~L~~Ls~~~~~~~~~l~~~~~~~~ 289 (594)
T 2p1m_B 210 CPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPAYLPAVYSVCS 289 (594)
T ss_dssp CTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHTCTTCCEEECCBTCCGGGGGGGHHHHT
T ss_pred CCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccccCccchhhHHHHHHHHhcCCCcccccCCcccchhhHHHHHHhhC
Confidence 7899999999883222356666677777777755442 11 12333344678
Q ss_pred CCCEEEccCCcCCCcC-CccccCCCCCCEEEccCCCCCC-CCchhhhcCCCCCeEEcCC--------CCCCC-CCCCccC
Q 003737 212 NLNDLRISDNNFSGKI-PEFIGKWKKIQKLHIQGSSLEG-PIPASISALTSLTDLRISD--------LKGSE-SAFPKLD 280 (799)
Q Consensus 212 ~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~--------n~~~~-~~~~~l~ 280 (799)
+|++|++++|.+++.. +..+..+++|++|++++| +.. .++.....+++|++|++.+ ++... ..+..+.
T Consensus 290 ~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~ 368 (594)
T 2p1m_B 290 RLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVS 368 (594)
T ss_dssp TCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHH
T ss_pred CCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHH
Confidence 8999999988876432 233567888999999887 332 2233334578888888843 12111 1112221
Q ss_pred --CCCccEEEccCCcCcccCCcccc-CCCCCCeeccc--c----ccCCCC-----CchhhhccCCCCEEeccCCcCCCcC
Q 003737 281 --KMNLKTLILTKCLIHGEIPDYIG-DMTKLKNIDLS--F----NNLTGG-----IPTTFEKLAKTNFMYLTGNKLTGPV 346 (799)
Q Consensus 281 --~~~L~~L~L~~N~l~~~~p~~l~-~l~~L~~L~Ls--~----N~l~~~-----~p~~~~~l~~L~~L~L~~N~l~g~~ 346 (799)
.++|+.|+++.|.+++..+..+. .+++|+.|+++ + |+++.. ++..+..+++|+.|++++ .+++..
T Consensus 369 ~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~ 447 (594)
T 2p1m_B 369 MGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKV 447 (594)
T ss_dssp HHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHH
T ss_pred HhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHH
Confidence 25788888888887765555554 47788888888 3 555522 222356677888888866 565544
Q ss_pred Chhh---hcCCCEEEeecCcCcccC
Q 003737 347 PKYI---FNSNKNVDISLNNFTWES 368 (799)
Q Consensus 347 p~~~---~~~l~~l~ls~N~~~g~~ 368 (799)
+..+ ...++.|+|++|.+++..
T Consensus 448 ~~~l~~~~~~L~~L~L~~~~i~~~~ 472 (594)
T 2p1m_B 448 FEYIGTYAKKMEMLSVAFAGDSDLG 472 (594)
T ss_dssp HHHHHHHCTTCCEEEEESCCSSHHH
T ss_pred HHHHHHhchhccEeeccCCCCcHHH
Confidence 4433 346778888888776543
No 158
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.58 E-value=6.9e-17 Score=188.85 Aligned_cols=274 Identities=16% Similarity=0.133 Sum_probs=190.5
Q ss_pred ccEEEEEeCCCCCcccCCcccc-CCCCCCEEEccCC-cCCCc-Ccccccccc-eeEEEccCCcCcCcCCccc----CCCC
Q 003737 92 CHVVTIALKAQNLTGTLPTELS-KLRYLKQLDLSRN-CLTGS-FSPQWASLQ-LVELSVMGNRLSGPFPKVL----TNIT 163 (799)
Q Consensus 92 ~~v~~L~L~~~~l~g~~p~~~~-~l~~L~~L~Ls~N-~l~~~-~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~----~~L~ 163 (799)
.++++|+|+++.+++..+..+. .+++|++|+|++| .++.. ++..+..++ |++|+|++|.+++..+..+ ..++
T Consensus 105 ~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~ 184 (594)
T 2p1m_B 105 TWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYT 184 (594)
T ss_dssp TTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCC
T ss_pred CCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCC
Confidence 4688999999988877776665 6889999999998 55432 344444565 9999999999876554444 3677
Q ss_pred CCCEEEeeCCcCCCCCC-c----cccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccCCc----------------
Q 003737 164 TLKNLSIEGNLFTGSIP-P----DIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNN---------------- 222 (799)
Q Consensus 164 ~L~~L~Ls~N~l~~~~p-~----~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~---------------- 222 (799)
+|++|++++|. +.+. . .+..+++|++|++++|...+.+|..+..+++|++|+++.+.
T Consensus 185 ~L~~L~l~~~~--~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~ 262 (594)
T 2p1m_B 185 SLVSLNISCLA--SEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALS 262 (594)
T ss_dssp CCCEEECTTCC--SCCCHHHHHHHHHHCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHH
T ss_pred cCcEEEecccC--CcCCHHHHHHHHHhCCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccccCccchhhHHHHHHHHh
Confidence 99999999887 1222 2 23457999999999883333477777888888888865542
Q ss_pred ----------CC----CcCCccccCCCCCCEEEccCCCCCCCCc-hhhhcCCCCCeEEcCCCCCCCCCCCccCC--CCcc
Q 003737 223 ----------FS----GKIPEFIGKWKKIQKLHIQGSSLEGPIP-ASISALTSLTDLRISDLKGSESAFPKLDK--MNLK 285 (799)
Q Consensus 223 ----------l~----~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~n~~~~~~~~~l~~--~~L~ 285 (799)
+. +.++..+..+++|++|+|++|.+++... ..+..+++|+.|+++++ .....++.+.. ++|+
T Consensus 263 ~~~~L~~Ls~~~~~~~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~ 341 (594)
T 2p1m_B 263 GCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLR 341 (594)
T ss_dssp TCTTCCEEECCBTCCGGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCC
T ss_pred cCCCcccccCCcccchhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCC
Confidence 11 1234444467899999999999775433 33668999999999985 33223333222 6899
Q ss_pred EEEccC---------CcCcccCCcccc-CCCCCCeeccccccCCCCCchhhh-ccCCCCEEecc--C----CcCCCcCCh
Q 003737 286 TLILTK---------CLIHGEIPDYIG-DMTKLKNIDLSFNNLTGGIPTTFE-KLAKTNFMYLT--G----NKLTGPVPK 348 (799)
Q Consensus 286 ~L~L~~---------N~l~~~~p~~l~-~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~L~--~----N~l~g~~p~ 348 (799)
.|+++. +.+++.....+. .+++|+.|+++.|++++..+..+. .+++|+.|+++ + |.+++...+
T Consensus 342 ~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~ 421 (594)
T 2p1m_B 342 ELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLD 421 (594)
T ss_dssp EEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTH
T ss_pred EEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchh
Confidence 999943 455543333333 489999999999999987766665 68999999999 4 666632211
Q ss_pred -h----h--hcCCCEEEeecCcCcccCC
Q 003737 349 -Y----I--FNSNKNVDISLNNFTWESS 369 (799)
Q Consensus 349 -~----~--~~~l~~l~ls~N~~~g~~p 369 (799)
. + ...++.|++++ .++...+
T Consensus 422 ~~~~~l~~~~~~L~~L~L~~-~l~~~~~ 448 (594)
T 2p1m_B 422 IGFGAIVEHCKDLRRLSLSG-LLTDKVF 448 (594)
T ss_dssp HHHHHHHHHCTTCCEEECCS-SCCHHHH
T ss_pred hHHHHHHhhCCCccEEeecC-cccHHHH
Confidence 1 1 35789999987 6665443
No 159
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.58 E-value=1.2e-14 Score=141.99 Aligned_cols=132 Identities=23% Similarity=0.304 Sum_probs=73.3
Q ss_pred EEEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCcCcccccccceeEEEccCCcCcCcCCcccCCCCCCCEEEeeCCc
Q 003737 95 VTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNL 174 (799)
Q Consensus 95 ~~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~ 174 (799)
+.+++++++++ .+|..+ .++|++|++++|++++.+ +..|..+++|++|+|++|.
T Consensus 10 ~~l~~~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~-----------------------~~~~~~l~~L~~L~l~~n~ 63 (177)
T 2o6r_A 10 TEIRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLP-----------------------HGVFDKLTQLTKLSLSQNQ 63 (177)
T ss_dssp TEEECCSSCCS-SCCTTC--CTTCSEEECCSSCCCCCC-----------------------TTTTTTCTTCSEEECCSSC
T ss_pred CEEEecCCCCc-cCCCCC--CCCCcEEEeCCCcccEeC-----------------------HHHhcCcccccEEECCCCc
Confidence 35666666666 344333 245666666666555443 3444555555555555555
Q ss_pred CCCCCCccccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccCCcCCCcCCccccCCCCCCEEEccCCCCCCCCc
Q 003737 175 FTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIP 252 (799)
Q Consensus 175 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 252 (799)
+++..+..|..+++|++|++++|++++..+..+..+++|++|++++|++++..+..+..+++|++|+|++|.+.+..|
T Consensus 64 l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 64 IQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred ceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 554444445555556666666665554444445556666666666666654444445556666666666666655443
No 160
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.58 E-value=8.2e-15 Score=143.11 Aligned_cols=111 Identities=23% Similarity=0.290 Sum_probs=74.5
Q ss_pred cccEEEEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEEE
Q 003737 91 TCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLS 169 (799)
Q Consensus 91 ~~~v~~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~ 169 (799)
..+++.|++++|++++..+..|..+++|++|+|++|.+++.++..|..+. |++|++++|++++..+..+..+++|++|+
T Consensus 27 ~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 106 (177)
T 2o6r_A 27 PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELA 106 (177)
T ss_dssp CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEE
Confidence 35799999999999977777789999999999999988866655555554 66666666666555555555555555555
Q ss_pred eeCCcCCCCCCccccCCCCCCEEEcccCcCCc
Q 003737 170 IEGNLFTGSIPPDIRKLINLQKLILSSNSFTG 201 (799)
Q Consensus 170 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 201 (799)
|++|.+++..+..+..+++|++|++++|.+++
T Consensus 107 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 138 (177)
T 2o6r_A 107 LDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 138 (177)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CcCCcceEeCHHHhcCCcccCEEEecCCCeec
Confidence 55555554333334555555555555555554
No 161
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.58 E-value=1.1e-14 Score=144.47 Aligned_cols=126 Identities=21% Similarity=0.300 Sum_probs=110.8
Q ss_pred eEEEccCCcCcCcCCcccCCCCCCCEEEeeCCcCCCCCCccccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccCC
Q 003737 142 VELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDN 221 (799)
Q Consensus 142 ~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 221 (799)
+++++++|.++ .+|..+. ++|++|+|++|.++ .+|..|.++++|++|+|++|.+++..+..|.++++|++|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 34555566655 4555443 58999999999998 78899999999999999999999888889999999999999999
Q ss_pred cCCCcCCccccCCCCCCEEEccCCCCCCCCchhhhcCCCCCeEEcCCCCC
Q 003737 222 NFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKG 271 (799)
Q Consensus 222 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~~ 271 (799)
++++..|..|..+++|++|+|++|.++...+..|..+++|+.|++++|..
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~ 138 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPL 138 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCE
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCe
Confidence 99998888999999999999999999987777899999999999998654
No 162
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=99.58 E-value=1.2e-15 Score=169.36 Aligned_cols=122 Identities=20% Similarity=0.305 Sum_probs=105.3
Q ss_pred HHHHHHhhcCCCCCCeecccCCeeEEEEEeC-CCcEEEEEEccccC---hhhHHHHHHHHHHHHhCCCCcccceeEEEEE
Q 003737 668 LRQIKAATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS---RQGNREFVNEIGMISAQQHPNLVKLYGCCVE 743 (799)
Q Consensus 668 ~~~~~~~t~~f~~~~~lG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~ 743 (799)
+.+++...++|+..+.||+|+||+||+|+.. +++.||+|+++... ....+.+.+|++++..++|||||++++++.+
T Consensus 61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 140 (410)
T 3v8s_A 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 140 (410)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence 4455566788999999999999999999964 68999999996531 1223468899999999999999999999999
Q ss_pred CCEEEEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 744 GNQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 744 ~~~~~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
.+..|+|||||++|+|.++++.. .+++..++.++.||+.||+|||+
T Consensus 141 ~~~~~lV~E~~~gg~L~~~l~~~----------~~~e~~~~~~~~qi~~aL~~LH~ 186 (410)
T 3v8s_A 141 DRYLYMVMEYMPGGDLVNLMSNY----------DVPEKWARFYTAEVVLALDAIHS 186 (410)
T ss_dssp SSEEEEEECCCTTEEHHHHHHHC----------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEeCCCCCcHHHHHHcC----------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999753 47788999999999999999994
No 163
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=99.58 E-value=2.8e-15 Score=156.46 Aligned_cols=116 Identities=21% Similarity=0.356 Sum_probs=101.3
Q ss_pred cCCCCCCeecccCCeeEEEEEeCCCcEEEEEEccccC--hhhHHHHHHHHHHHHhCCCCcccceeEEEEEC--CEEEEEE
Q 003737 676 NNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVEG--NQLLLVY 751 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lV~ 751 (799)
++|...+.||+|+||.||+|+.. ++.||||++.... ....+.|.+|++++.+++||||+++++++.+. +..++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 45777899999999999999974 8899999997643 34457899999999999999999999999876 7789999
Q ss_pred ecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 752 EYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 752 Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
||+++|+|.++++..... .+++..+..++.||++||+|||+
T Consensus 89 e~~~~~~L~~~l~~~~~~-------~~~~~~~~~i~~qi~~~l~~lH~ 129 (271)
T 3kmu_A 89 HWMPYGSLYNVLHEGTNF-------VVDQSQAVKFALDMARGMAFLHT 129 (271)
T ss_dssp ECCTTCBHHHHHHSCSSC-------CCCHHHHHHHHHHHHHHHHHHTT
T ss_pred cccCCCcHHHHHhhcccC-------CCCHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999865421 47888999999999999999995
No 164
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=99.58 E-value=1.4e-15 Score=169.00 Aligned_cols=126 Identities=19% Similarity=0.224 Sum_probs=107.9
Q ss_pred ccHHHHHHhhcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccC---hhhHHHHHHHHHHHHhCCCCcccceeEEE
Q 003737 666 YTLRQIKAATNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKS---RQGNREFVNEIGMISAQQHPNLVKLYGCC 741 (799)
Q Consensus 666 ~~~~~~~~~t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~ 741 (799)
+.+.+.....++|+..+.||+|+||+||+++. .+|+.||||++++.. ....+.+.+|.+++.+++|||||++++++
T Consensus 51 ~~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~ 130 (412)
T 2vd5_A 51 VRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAF 130 (412)
T ss_dssp HHHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred hhhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence 34455556678899999999999999999996 479999999996532 12234688999999999999999999999
Q ss_pred EECCEEEEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 742 VEGNQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 742 ~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
.+.+..|+|||||++|+|.+++.+.+. .+++..++.|+.||+.||+|||+
T Consensus 131 ~~~~~~~lVmE~~~gg~L~~~l~~~~~--------~l~~~~~~~~~~qi~~aL~~LH~ 180 (412)
T 2vd5_A 131 QDENYLYLVMEYYVGGDLLTLLSKFGE--------RIPAEMARFYLAEIVMAIDSVHR 180 (412)
T ss_dssp ECSSEEEEEECCCCSCBHHHHHHHHSS--------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred eeCCEEEEEEcCCCCCcHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999976431 57888999999999999999994
No 165
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=99.57 E-value=7.8e-15 Score=157.79 Aligned_cols=116 Identities=16% Similarity=0.266 Sum_probs=102.4
Q ss_pred hcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccChhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEEec
Q 003737 675 TNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEY 753 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 753 (799)
.++|...+.||+|+||.||+|.. .+++.||+|.+.... .....+.+|++++.+++||||+++++++.+.+..++||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 46788889999999999999995 468899999987543 3456789999999999999999999999999999999999
Q ss_pred CCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 754 MKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 754 ~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
+++|+|.+++..... .+++..+..++.||++||+|||+
T Consensus 83 ~~g~~L~~~l~~~~~--------~~~~~~~~~i~~qi~~al~~lH~ 120 (321)
T 1tki_A 83 ISGLDIFERINTSAF--------ELNEREIVSYVHQVCEALQFLHS 120 (321)
T ss_dssp CCCCBHHHHHTSSSC--------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999976432 57888999999999999999994
No 166
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=99.57 E-value=4.7e-15 Score=162.35 Aligned_cols=116 Identities=21% Similarity=0.354 Sum_probs=102.9
Q ss_pred hcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccC--hhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEE
Q 003737 675 TNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 751 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 751 (799)
.++|...+.||+|+||.||+|.. .+|+.||+|++.... ....+.+.+|++++.+++|||||++++++.+.+..++||
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~ 107 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 107 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 45688899999999999999995 478999999996542 334568999999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 752 EYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 752 Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
||+++|+|.+++..+. .+++..+..++.||++||+|||+
T Consensus 108 e~~~gg~L~~~l~~~~---------~~~~~~~~~~~~qi~~al~~lH~ 146 (362)
T 2bdw_A 108 DLVTGGELFEDIVARE---------FYSEADASHCIQQILESIAYCHS 146 (362)
T ss_dssp CCCCSCBHHHHHTTCS---------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCCCCCHHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999997654 57888999999999999999994
No 167
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=99.57 E-value=4.1e-15 Score=159.74 Aligned_cols=115 Identities=18% Similarity=0.334 Sum_probs=102.0
Q ss_pred cCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccC---hhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEE
Q 003737 676 NNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKS---RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 751 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 751 (799)
++|+..+.||+|+||.||++.. .+|+.||+|+++... ....+.+.+|+.++.+++|||||++++++.+.+..++||
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~ 85 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 85 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence 5678889999999999999995 479999999997542 233567889999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 752 EYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 752 Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
||+++|+|.+++.... .+++..++.++.||+.||+|||+
T Consensus 86 e~~~gg~L~~~l~~~~---------~~~~~~~~~~~~qi~~aL~~LH~ 124 (318)
T 1fot_A 86 DYIEGGELFSLLRKSQ---------RFPNPVAKFYAAEVCLALEYLHS 124 (318)
T ss_dssp CCCCSCBHHHHHHHTS---------SCCHHHHHHHHHHHHHHHHHHHT
T ss_pred eCCCCCCHHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998654 57888999999999999999995
No 168
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.57 E-value=5.3e-15 Score=154.63 Aligned_cols=115 Identities=23% Similarity=0.499 Sum_probs=101.8
Q ss_pred cCCCCCCeecccCCeeEEEEEeCCCcEEEEEEccccChhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEEecCC
Q 003737 676 NNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYMK 755 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~ 755 (799)
++|+..+.||+|+||.||+|...+++.||+|++.... ...+++.+|++++.+++||||+++++++.+.+..++||||++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 88 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME 88 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCC
Confidence 4577789999999999999998888899999997643 234679999999999999999999999999999999999999
Q ss_pred CCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 756 NNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 756 ~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
+|+|.+++..... .+++..+..++.|+++||+|||+
T Consensus 89 ~~~L~~~l~~~~~--------~~~~~~~~~i~~~i~~~l~~lH~ 124 (269)
T 4hcu_A 89 HGCLSDYLRTQRG--------LFAAETLLGMCLDVCEGMAYLEE 124 (269)
T ss_dssp TCBHHHHHHTTTT--------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHhcCc--------ccCHHHHHHHHHHHHHHHHHHHh
Confidence 9999999976432 47788899999999999999994
No 169
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=99.57 E-value=5.1e-15 Score=159.61 Aligned_cols=115 Identities=18% Similarity=0.311 Sum_probs=101.5
Q ss_pred cCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccCh------hhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEE
Q 003737 676 NNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSR------QGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLL 748 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~------~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 748 (799)
+.|...+.||+|+||.||+|.. .+|+.||||.+..... ...+.+.+|++++.+++||||+++++++.+.+..+
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 90 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 90 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 4577889999999999999995 4789999999865422 13578999999999999999999999999999999
Q ss_pred EEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 749 LVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 749 lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
+||||+++|+|.+++.... .+++..+..++.||+.||+|||+
T Consensus 91 lv~e~~~~~~L~~~l~~~~---------~~~~~~~~~i~~qi~~al~~lH~ 132 (326)
T 2y0a_A 91 LILELVAGGELFDFLAEKE---------SLTEEEATEFLKQILNGVYYLHS 132 (326)
T ss_dssp EEEECCCSCBHHHHHTTSS---------CCBHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEcCCCCCHHHHHHhcC---------CcCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999997654 57888999999999999999994
No 170
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=99.57 E-value=9.3e-15 Score=156.51 Aligned_cols=115 Identities=21% Similarity=0.338 Sum_probs=101.0
Q ss_pred cCCCC-CCeecccCCeeEEEEE-eCCCcEEEEEEccccChhhHHHHHHHHHHHHhC-CCCcccceeEEEEECCEEEEEEe
Q 003737 676 NNFDP-ANKVGEGGFGSVYKGI-LSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQ-QHPNLVKLYGCCVEGNQLLLVYE 752 (799)
Q Consensus 676 ~~f~~-~~~lG~G~~g~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~E 752 (799)
+.|.. .+.||+|+||.||+|. ..+++.||||++........+.+.+|++++.++ +||||+++++++.+.+..++|||
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 91 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE 91 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence 34555 3789999999999999 457899999999766555567899999999985 79999999999999999999999
Q ss_pred cCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 753 YMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 753 y~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
|+++|+|.+++.... .+++..+..++.||++||+|||+
T Consensus 92 ~~~~~~L~~~l~~~~---------~~~~~~~~~i~~qi~~~l~~lH~ 129 (316)
T 2ac3_A 92 KMRGGSILSHIHKRR---------HFNELEASVVVQDVASALDFLHN 129 (316)
T ss_dssp CCTTCBHHHHHHHHS---------SCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCcHHHHHhccC---------CCCHHHHHHHHHHHHHHHHHHHh
Confidence 999999999998654 57788999999999999999994
No 171
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=99.57 E-value=5.9e-15 Score=162.86 Aligned_cols=117 Identities=18% Similarity=0.334 Sum_probs=104.3
Q ss_pred hcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccChhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEEec
Q 003737 675 TNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEY 753 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 753 (799)
.+.|+..+.||+|+||.||+|.. .+|+.||+|.+..........+.+|++++.+++|||||++++++.+.+..++||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 35688889999999999999995 47899999999776555667899999999999999999999999999999999999
Q ss_pred CCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 754 MKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 754 ~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
+++|+|.+++..... .+++..+..++.||+.||+|||+
T Consensus 130 ~~gg~L~~~l~~~~~--------~l~~~~~~~i~~qi~~aL~~LH~ 167 (387)
T 1kob_A 130 LSGGELFDRIAAEDY--------KMSEAEVINYMRQACEGLKHMHE 167 (387)
T ss_dssp CCCCBHHHHTTCTTC--------CBCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcHHHHHHhhcC--------CCCHHHHHHHHHHHHHHHHHHHh
Confidence 999999999976432 57788999999999999999994
No 172
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=99.57 E-value=3.3e-15 Score=159.83 Aligned_cols=124 Identities=21% Similarity=0.386 Sum_probs=104.3
Q ss_pred HHHHHhhcCCCCCCeecccCCeeEEEEEeCCCcEEEEEEccccC--hhhHHHHHHHHHHHHhCCCCcccceeEEEEECCE
Q 003737 669 RQIKAATNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQ 746 (799)
Q Consensus 669 ~~~~~~t~~f~~~~~lG~G~~g~Vy~~~~~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~ 746 (799)
.++....++|+..+.||+|+||.||+|+. +|+.||||++.... ....+.|.+|++++.+++||||+++++++.+.+.
T Consensus 30 ~~~~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 108 (309)
T 3p86_A 30 DDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPN 108 (309)
T ss_dssp --CBCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTC
T ss_pred ccccCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCc
Confidence 33344556788889999999999999987 58899999997653 3345689999999999999999999999999999
Q ss_pred EEEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 747 LLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 747 ~~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
.++||||+++|+|.++++..... ..+++..+..++.||++||+|||+
T Consensus 109 ~~lv~e~~~~~~L~~~l~~~~~~------~~~~~~~~~~i~~qi~~aL~~LH~ 155 (309)
T 3p86_A 109 LSIVTEYLSRGSLYRLLHKSGAR------EQLDERRRLSMAYDVAKGMNYLHN 155 (309)
T ss_dssp CEEEEECCTTCBHHHHHHSTTHH------HHSCHHHHHHHHHHHHHHHHHHHT
T ss_pred eEEEEecCCCCcHHHHHhhcCCC------CCCCHHHHHHHHHHHHHHHHHHHc
Confidence 99999999999999999865421 136788888999999999999995
No 173
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=99.57 E-value=4.2e-15 Score=163.34 Aligned_cols=112 Identities=23% Similarity=0.379 Sum_probs=94.9
Q ss_pred CCCeecccCCeeEEEEEe-CCCcEEEEEEccccChhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEEecCCCCc
Q 003737 680 PANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYMKNNC 758 (799)
Q Consensus 680 ~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~Gs 758 (799)
..+.||+|+||.||+|.. .+|+.||+|+++.......+.|.+|++++.+++|||||++++++.+.+..++||||+++|+
T Consensus 93 ~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~ 172 (373)
T 2x4f_A 93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGE 172 (373)
T ss_dssp EEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCE
T ss_pred cceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCc
Confidence 356899999999999995 5789999999987666667889999999999999999999999999999999999999999
Q ss_pred HHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 759 LSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 759 L~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
|.+++..... .+++..+..++.||++||+|||+
T Consensus 173 L~~~l~~~~~--------~l~~~~~~~i~~qi~~aL~~LH~ 205 (373)
T 2x4f_A 173 LFDRIIDESY--------NLTELDTILFMKQICEGIRHMHQ 205 (373)
T ss_dssp EHHHHHHTGG--------GCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCC--------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999975432 46788888999999999999994
No 174
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=99.57 E-value=5e-15 Score=159.62 Aligned_cols=116 Identities=22% Similarity=0.394 Sum_probs=100.4
Q ss_pred cCCCCCCeecccCCeeEEEEEeC----CCcEEEEEEcccc-ChhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEE
Q 003737 676 NNFDPANKVGEGGFGSVYKGILS----DGTVIAVKQLSSK-SRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLV 750 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~~----~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 750 (799)
++|...+.||+|+||.||+|... .+..||||+++.. .....+.|.+|++++.+++||||+++++++.+.+..++|
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 128 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV 128 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEE
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEE
Confidence 45677899999999999999963 3456999999765 344457899999999999999999999999999999999
Q ss_pred EecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 751 YEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 751 ~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
|||+++|+|.++++.... .+++..+..++.||+.||+|||+
T Consensus 129 ~e~~~~~~L~~~l~~~~~--------~~~~~~~~~i~~qi~~~L~~LH~ 169 (325)
T 3kul_A 129 TEYMENGSLDTFLRTHDG--------QFTIMQLVGMLRGVGAGMRYLSD 169 (325)
T ss_dssp EECCTTCBHHHHHHTTTT--------CSCHHHHHHHHHHHHHHHHHHHH
T ss_pred eeCCCCCcHHHHHHhccc--------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999975432 57788899999999999999994
No 175
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=99.57 E-value=4.8e-15 Score=161.55 Aligned_cols=116 Identities=22% Similarity=0.366 Sum_probs=102.0
Q ss_pred hcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEcccc---ChhhHHHHHHHHHHHHhC-CCCcccceeEEEEECCEEEE
Q 003737 675 TNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSK---SRQGNREFVNEIGMISAQ-QHPNLVKLYGCCVEGNQLLL 749 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~l 749 (799)
.++|+..+.||+|+||+||+|+. .+|+.||||+++.. .....+.+.+|.+++.++ +|||||++++++.+.+..|+
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 101 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF 101 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence 46788899999999999999995 46899999999754 223456788999999988 69999999999999999999
Q ss_pred EEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 750 VYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 750 V~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
||||+++|+|.+++...+ .+++..++.|+.||+.||+|||+
T Consensus 102 v~E~~~gg~L~~~l~~~~---------~~~~~~~~~~~~qi~~aL~~LH~ 142 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQKSR---------RFDEARARFYAAEIISALMFLHD 142 (353)
T ss_dssp EEECCCSCBHHHHHHHHS---------SCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCCCCcHHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998654 67899999999999999999994
No 176
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=99.56 E-value=7.1e-15 Score=156.02 Aligned_cols=116 Identities=20% Similarity=0.230 Sum_probs=102.1
Q ss_pred hcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEcccc---ChhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEE
Q 003737 675 TNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSK---SRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLV 750 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 750 (799)
.++|+..+.||+|+||.||+|.. .+++.||+|.+... .....+.|.+|++++.+++||||+++++++.+.+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 35688889999999999999994 57899999998543 233457899999999999999999999999999999999
Q ss_pred EecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 751 YEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 751 ~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
|||+++|+|.+++...+ .+++..+..++.|+++||+|||+
T Consensus 90 ~e~~~g~~L~~~l~~~~---------~~~~~~~~~~~~qi~~~l~~lH~ 129 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESHG---------PLSVDTAINFTNQILDGIKHAHD 129 (294)
T ss_dssp EECCCSCBHHHHHHHHC---------SCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EeCCCCCCHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999997654 57788999999999999999994
No 177
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=99.56 E-value=2.5e-15 Score=165.51 Aligned_cols=118 Identities=21% Similarity=0.409 Sum_probs=102.1
Q ss_pred hhcCCCCCCeecccCCeeEEEEEeC-CCcEEEEEEccccC-hhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEE
Q 003737 674 ATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 751 (799)
Q Consensus 674 ~t~~f~~~~~lG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 751 (799)
..++|...+.||+|+||.||+|... +++.||||+++... ....+.|.+|++++.+++|||||+++++|...+..++||
T Consensus 112 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 191 (377)
T 3cbl_A 112 NHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVM 191 (377)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred chHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEE
Confidence 3456778899999999999999975 78999999997543 233457999999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 752 EYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 752 Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
|||++|+|.++++.... .+++..+..++.||++||+|||+
T Consensus 192 e~~~~g~L~~~l~~~~~--------~~~~~~~~~~~~qi~~~l~~LH~ 231 (377)
T 3cbl_A 192 ELVQGGDFLTFLRTEGA--------RLRVKTLLQMVGDAAAGMEYLES 231 (377)
T ss_dssp ECCTTCBHHHHHHHHGG--------GCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EcCCCCCHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999986432 46777888999999999999994
No 178
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=99.56 E-value=5.4e-15 Score=156.15 Aligned_cols=116 Identities=24% Similarity=0.342 Sum_probs=101.8
Q ss_pred cCCCCCCeecccCCeeEEEEEeC-CC-------cEEEEEEccccChhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEE
Q 003737 676 NNFDPANKVGEGGFGSVYKGILS-DG-------TVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQL 747 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~~-~g-------~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~ 747 (799)
++|...+.||+|+||.||+|... ++ ..||+|.+........+.|.+|++++.+++||||+++++++.+++..
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDEN 87 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCC
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCC
Confidence 45777899999999999999843 33 57999999776666678899999999999999999999999999999
Q ss_pred EEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 748 LLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 748 ~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
++||||+++|+|.+++..... .+++..+..++.||++||+|||+
T Consensus 88 ~lv~e~~~~~~L~~~l~~~~~--------~~~~~~~~~i~~qi~~~L~~LH~ 131 (289)
T 4fvq_A 88 ILVQEFVKFGSLDTYLKKNKN--------CINILWKLEVAKQLAAAMHFLEE 131 (289)
T ss_dssp EEEEECCTTCBHHHHHHHTGG--------GCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHhCCC--------CCCHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999986542 36788888999999999999994
No 179
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=99.56 E-value=5.7e-15 Score=155.00 Aligned_cols=116 Identities=18% Similarity=0.339 Sum_probs=103.4
Q ss_pred hcCCCCCCeecccCCeeEEEEEeC-CCcEEEEEEccccChhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEEec
Q 003737 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEY 753 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 753 (799)
.++|...+.||+|+||.||+|... ++..||+|++........+.+.+|++++.+++||||+++++++.+.+..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL 87 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence 345788899999999999999954 5789999999776555678899999999999999999999999999999999999
Q ss_pred CCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 754 MKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 754 ~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
+++|+|.+++.... .+++..+..++.|+++||+|||+
T Consensus 88 ~~~~~L~~~~~~~~---------~~~~~~~~~i~~~i~~~l~~lH~ 124 (277)
T 3f3z_A 88 CTGGELFERVVHKR---------VFRESDAARIMKDVLSAVAYCHK 124 (277)
T ss_dssp CCSCBHHHHHHHHC---------SCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCcHHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999987654 57788999999999999999994
No 180
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=99.56 E-value=3.8e-15 Score=160.42 Aligned_cols=116 Identities=24% Similarity=0.351 Sum_probs=99.7
Q ss_pred hcCCCCCCeecccCCeeEEEEEeC-CCcEEEEEEccccCh-hhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEEe
Q 003737 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSR-QGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYE 752 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 752 (799)
.++|+..+.||+|+||.||+|... +++.||||++..... ...+.+.+|++++.+++|||||++++++.+++..++|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 357888999999999999999954 789999999965432 234678999999999999999999999999999999999
Q ss_pred cCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 753 YMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 753 y~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
|+++|+|.+++.... .+++..+..++.||++||+|||+
T Consensus 86 ~~~~~~L~~~l~~~~---------~~~~~~~~~i~~qi~~aL~~LH~ 123 (323)
T 3tki_A 86 YCSGGELFDRIEPDI---------GMPEPDAQRFFHQLMAGVVYLHG 123 (323)
T ss_dssp CCTTEEGGGGSBTTT---------BCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCcHHHHHhhcC---------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999987654 57788999999999999999994
No 181
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=99.56 E-value=7.2e-15 Score=159.69 Aligned_cols=115 Identities=18% Similarity=0.299 Sum_probs=101.2
Q ss_pred cCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccC---hhhHHHHHHHHHHHHhC-CCCcccceeEEEEECCEEEEE
Q 003737 676 NNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKS---RQGNREFVNEIGMISAQ-QHPNLVKLYGCCVEGNQLLLV 750 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV 750 (799)
++|+..+.||+|+||.||+++. .+++.||+|+++... ....+.+.+|.+++.++ +|||||++++++.+.+..|+|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 4578889999999999999996 468999999997542 33456788999999988 899999999999999999999
Q ss_pred EecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 751 YEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 751 ~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
|||+++|+|.+++...+ .+++..++.++.||+.||+|||+
T Consensus 89 ~e~~~gg~L~~~l~~~~---------~l~~~~~~~~~~qi~~aL~~LH~ 128 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQR---------KLPEEHARFYSAEISLALNYLHE 128 (345)
T ss_dssp ECCCCSCBHHHHHHHHS---------SCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EeCCCCCcHHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999997654 57888999999999999999994
No 182
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=99.56 E-value=9.9e-15 Score=161.37 Aligned_cols=117 Identities=15% Similarity=0.258 Sum_probs=102.7
Q ss_pred cCCCCCCeeccc--CCeeEEEEEeC-CCcEEEEEEccccC--hhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEE
Q 003737 676 NNFDPANKVGEG--GFGSVYKGILS-DGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLV 750 (799)
Q Consensus 676 ~~f~~~~~lG~G--~~g~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 750 (799)
++|+..+.||+| +||.||+|... +|+.||||++.... ....+.+.+|++++++++|||||++++++.+.+..++|
T Consensus 25 ~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 104 (389)
T 3gni_B 25 GCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVV 104 (389)
T ss_dssp GGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred CcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEE
Confidence 457888999999 99999999964 79999999997542 33456788999999999999999999999999999999
Q ss_pred EecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 751 YEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 751 ~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
||||++|+|.+++...... .+++..+..++.||++||+|||+
T Consensus 105 ~e~~~~~~L~~~l~~~~~~-------~~~~~~~~~~~~qi~~~l~~LH~ 146 (389)
T 3gni_B 105 TSFMAYGSAKDLICTHFMD-------GMNELAIAYILQGVLKALDYIHH 146 (389)
T ss_dssp EECCTTCBHHHHHHHTCTT-------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEccCCCCHHHHHhhhccc-------CCCHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999865322 57888999999999999999994
No 183
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.55 E-value=1.1e-14 Score=153.95 Aligned_cols=113 Identities=11% Similarity=0.032 Sum_probs=97.4
Q ss_pred cCCCCCCeecccCCeeEEEEEeC-CCcEEEEEEccccC---hhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEE
Q 003737 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS---RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 751 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 751 (799)
++|...+.||+|+||.||+|... +|+.||||++.... ....+.|.+|++.+.+++||||+++++++.+.+..|+||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 56888899999999999999964 58999999997653 233478999999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 752 EYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 752 Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
||+++|+|.+++... . .+.++..++.|+++||+|||+
T Consensus 111 e~~~g~~L~~~l~~~----------~-~~~~~~~i~~ql~~aL~~lH~ 147 (286)
T 3uqc_A 111 EWIRGGSLQEVADTS----------P-SPVGAIRAMQSLAAAADAAHR 147 (286)
T ss_dssp ECCCEEEHHHHHTTC----------C-CHHHHHHHHHHHHHHHHHHHH
T ss_pred EecCCCCHHHHHhcC----------C-ChHHHHHHHHHHHHHHHHHHH
Confidence 999999999999542 2 233567779999999999994
No 184
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=99.55 E-value=5.7e-15 Score=162.59 Aligned_cols=115 Identities=18% Similarity=0.376 Sum_probs=102.0
Q ss_pred cCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccC---hhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEE
Q 003737 676 NNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKS---RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 751 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 751 (799)
++|...+.||+|+||.||++.. .+++.||+|.+.... ....+.+.+|++++.+++|||||++++++.+.+..++||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 4578889999999999999995 468999999986532 234568999999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 752 EYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 752 Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
||+++|+|.+++.... .+++..++.|+.||+.||+|||+
T Consensus 95 e~~~gg~L~~~l~~~~---------~l~~~~~~~~~~qi~~aL~~LH~ 133 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQNV---------HFKEETVKLFICELVMALDYLQN 133 (384)
T ss_dssp CCCTTEEHHHHHHTTC---------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCCCCcHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998654 57888999999999999999994
No 185
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=99.55 E-value=4.4e-15 Score=157.48 Aligned_cols=116 Identities=24% Similarity=0.403 Sum_probs=101.1
Q ss_pred cCCCCCCeecccCCeeEEEEEe-----CCCcEEEEEEccccChhhHHHHHHHHHHHHhCCCCcccceeEEEEEC--CEEE
Q 003737 676 NNFDPANKVGEGGFGSVYKGIL-----SDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEG--NQLL 748 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~-----~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~ 748 (799)
++|+..+.||+|+||.||+|+. .+++.||||++........+.|.+|++++.+++||||+++++++... ...+
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 89 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCE
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceE
Confidence 4577889999999999999984 36889999999877666678899999999999999999999998653 5689
Q ss_pred EEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 749 LVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 749 lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
+||||+++|+|.+++..... .+++..+..++.|++.||+|||+
T Consensus 90 lv~e~~~~~~L~~~l~~~~~--------~~~~~~~~~~~~qi~~~l~~lH~ 132 (295)
T 3ugc_A 90 LIMEYLPYGSLRDYLQKHKE--------RIDHIKLLQYTSQICKGMEYLGT 132 (295)
T ss_dssp EEEECCTTCBHHHHHHHCGG--------GCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCHHHHHHhccc--------ccCHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999986542 46788889999999999999994
No 186
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=99.55 E-value=6.1e-15 Score=159.06 Aligned_cols=115 Identities=19% Similarity=0.324 Sum_probs=95.8
Q ss_pred cCCCCCCeecccCCeeEEEEEe----CCCcEEEEEEccccC----hhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEE
Q 003737 676 NNFDPANKVGEGGFGSVYKGIL----SDGTVIAVKQLSSKS----RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQL 747 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~----~~g~~vAvK~l~~~~----~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~ 747 (799)
++|+..+.||+|+||.||++.. .+|+.||+|+++... ......+.+|++++.+++|||||++++++.+.+..
T Consensus 17 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 96 (327)
T 3a62_A 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKL 96 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCE
T ss_pred HHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEE
Confidence 5688889999999999999986 478999999997642 22345688999999999999999999999999999
Q ss_pred EEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 748 LLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 748 ~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
++||||+++|+|.+++.... .+++..+..++.||+.||+|||+
T Consensus 97 ~lv~e~~~~~~L~~~l~~~~---------~~~~~~~~~~~~qi~~al~~lH~ 139 (327)
T 3a62_A 97 YLILEYLSGGELFMQLEREG---------IFMEDTACFYLAEISMALGHLHQ 139 (327)
T ss_dssp EEEEECCTTEEHHHHHHHHS---------SCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCcHHHHHHhCC---------CCCHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999997654 57788999999999999999994
No 187
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=99.55 E-value=3.1e-15 Score=168.96 Aligned_cols=121 Identities=21% Similarity=0.305 Sum_probs=103.8
Q ss_pred HHHHhhcCCCCCCeecccCCeeEEEEEeCCCcEEEEEEccccChhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEE
Q 003737 670 QIKAATNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLL 749 (799)
Q Consensus 670 ~~~~~t~~f~~~~~lG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 749 (799)
+++...++|...+.||+|+||.||+|...++..||||+++... ...+.|.+|++++++++|||||++++++. .+..++
T Consensus 182 ~~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~l 259 (454)
T 1qcf_A 182 AWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYI 259 (454)
T ss_dssp CSBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEE
T ss_pred ceeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEE
Confidence 3445567788889999999999999998888999999997643 34678999999999999999999999986 667899
Q ss_pred EEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 750 VYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 750 V~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
|||||++|+|.++++..... .+++..+..++.||++||+|||+
T Consensus 260 v~e~~~~g~L~~~l~~~~~~-------~~~~~~~~~~~~qi~~~l~~LH~ 302 (454)
T 1qcf_A 260 ITEFMAKGSLLDFLKSDEGS-------KQPLPKLIDFSAQIAEGMAFIEQ 302 (454)
T ss_dssp EECCCTTCBHHHHHHSHHHH-------TCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeecCCCcHHHHHHhccCC-------CCCHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999854321 46677888889999999999994
No 188
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=99.55 E-value=1.1e-14 Score=156.74 Aligned_cols=118 Identities=19% Similarity=0.387 Sum_probs=97.6
Q ss_pred cCCCCCCeecccCCeeEEEEEeC-CCcEEEEEEccccC-hhhHHHHHHHHHHHHhCCCCcccceeEEEEECC--------
Q 003737 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGN-------- 745 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~-------- 745 (799)
++|+..+.||+|+||.||+|+.. +|+.||||+++... ....+.+.+|++++++++|||||+++++|.+.+
T Consensus 6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 85 (332)
T 3qd2_B 6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEM 85 (332)
T ss_dssp HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHH
T ss_pred hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhh
Confidence 45788899999999999999965 79999999997543 335678999999999999999999999986643
Q ss_pred -------------------------------------------------EEEEEEecCCCCcHHHHHhcCcccccccccC
Q 003737 746 -------------------------------------------------QLLLVYEYMKNNCLSRAIFGKLRIFHISIYA 776 (799)
Q Consensus 746 -------------------------------------------------~~~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~ 776 (799)
..++||||+++|+|.+++.......
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~------ 159 (332)
T 3qd2_B 86 DEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLE------ 159 (332)
T ss_dssp HC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGG------
T ss_pred hhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCcc------
Confidence 3799999999999999998754321
Q ss_pred CCChHHHHHHHHHHHHHHhhhcC
Q 003737 777 TFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 777 ~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
..++..+..++.||++||+|||+
T Consensus 160 ~~~~~~~~~i~~qi~~aL~~LH~ 182 (332)
T 3qd2_B 160 DREHGVCLHIFIQIAEAVEFLHS 182 (332)
T ss_dssp GSCHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhHHHHHHHHHHHHHHHHHHh
Confidence 23455678889999999999994
No 189
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=99.55 E-value=9.6e-15 Score=153.78 Aligned_cols=116 Identities=22% Similarity=0.432 Sum_probs=99.7
Q ss_pred hcCCCCCCeecccCCeeEEEEEeCCCcEEEEEEccccChhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEEecC
Q 003737 675 TNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYM 754 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 754 (799)
.++|+..+.||+|+||.||++...++..||||+++.... ..+++.+|++++.+++||||+++++++.+.+..++||||+
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 101 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 101 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEecc
Confidence 356777899999999999999988888999999976432 3467999999999999999999999999999999999999
Q ss_pred CCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 755 KNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 755 ~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
++|+|.+++..... .+++..+..++.|+++||+|||+
T Consensus 102 ~~~~L~~~l~~~~~--------~~~~~~~~~i~~qi~~~l~~lH~ 138 (283)
T 3gen_A 102 ANGCLLNYLREMRH--------RFQTQQLLEMCKDVCEAMEYLES 138 (283)
T ss_dssp TTCBHHHHHHCGGG--------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHhcc--------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999986432 57788999999999999999994
No 190
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=99.55 E-value=6.9e-15 Score=160.15 Aligned_cols=115 Identities=21% Similarity=0.287 Sum_probs=102.0
Q ss_pred cCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccC---hhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEE
Q 003737 676 NNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKS---RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 751 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 751 (799)
++|+..+.||+|+||.||+++. .+|+.||+|++.... ....+.+.+|++++.+++||||+++++++.+.+..|+||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 4678889999999999999995 478999999996542 234567899999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 752 EYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 752 Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
||+++|+|.+++...+ .+++..++.++.||+.||+|||+
T Consensus 121 e~~~gg~L~~~l~~~~---------~~~~~~~~~~~~qi~~aL~~LH~ 159 (350)
T 1rdq_E 121 EYVAGGEMFSHLRRIG---------RFSEPHARFYAAQIVLTFEYLHS 159 (350)
T ss_dssp ECCTTCBHHHHHHHHC---------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCcHHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998654 57888999999999999999994
No 191
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=99.55 E-value=6.2e-15 Score=160.67 Aligned_cols=119 Identities=17% Similarity=0.286 Sum_probs=101.1
Q ss_pred cCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccC-----hhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEE
Q 003737 676 NNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKS-----RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLL 749 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~-----~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 749 (799)
+.|+..+.||+|+||.||+|.. .+|+.||||+++... ....+.+.+|++++.+++|||||++++++.+.+..++
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 103 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM 103 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 4577889999999999999985 578999999986431 1235789999999999999999999999999999999
Q ss_pred EEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 750 VYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 750 V~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
||||+++|+|.+++..+... ...+++..+..++.||++||+|||+
T Consensus 104 v~e~~~g~~L~~~l~~~~~~-----~~~~~~~~~~~i~~qi~~al~~lH~ 148 (351)
T 3c0i_A 104 VFEFMDGADLCFEIVKRADA-----GFVYSEAVASHYMRQILEALRYCHD 148 (351)
T ss_dssp EEECCSSCBHHHHHHHHHHT-----TCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCCCCCHHHHHHHhccc-----CCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999888654311 1247888999999999999999994
No 192
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=99.55 E-value=6.3e-15 Score=160.03 Aligned_cols=117 Identities=19% Similarity=0.292 Sum_probs=102.1
Q ss_pred hhcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccC---hhhHHHHHHHHHHHHhC-CCCcccceeEEEEECCEEE
Q 003737 674 ATNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKS---RQGNREFVNEIGMISAQ-QHPNLVKLYGCCVEGNQLL 748 (799)
Q Consensus 674 ~t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~ 748 (799)
..++|...+.||+|+||.||+|+. .+|+.||||+++... ....+.+.+|.+++.++ +||||+++++++.+.+..|
T Consensus 15 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~ 94 (345)
T 1xjd_A 15 KIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLF 94 (345)
T ss_dssp -CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEE
Confidence 457788999999999999999996 468999999997542 23456788999999886 9999999999999999999
Q ss_pred EEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 749 LVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 749 lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
+||||+++|+|.+++.... .+++..++.++.||+.||+|||+
T Consensus 95 lv~E~~~gg~L~~~l~~~~---------~~~~~~~~~~~~qi~~aL~~LH~ 136 (345)
T 1xjd_A 95 FVMEYLNGGDLMYHIQSCH---------KFDLSRATFYAAEIILGLQFLHS 136 (345)
T ss_dssp EEEECCTTCBHHHHHHHHS---------SCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCCcHHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998654 57888999999999999999994
No 193
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=99.55 E-value=8.3e-15 Score=152.97 Aligned_cols=116 Identities=24% Similarity=0.422 Sum_probs=102.5
Q ss_pred hcCCCCCCeecccCCeeEEEEEeCCCcEEEEEEccccChhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEEecC
Q 003737 675 TNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYM 754 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 754 (799)
.++|+..+.||+|+||.||+|...++..||||++.... ...+++.+|++++.+++||||+++++++.+.+..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI 85 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT-BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC-CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence 35677889999999999999998888899999997643 23567999999999999999999999999999999999999
Q ss_pred CCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 755 KNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 755 ~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
++|+|.+++..... .+++..+..++.|+++||+|||+
T Consensus 86 ~~~~L~~~l~~~~~--------~~~~~~~~~i~~qi~~~l~~lH~ 122 (268)
T 3sxs_A 86 SNGCLLNYLRSHGK--------GLEPSQLLEMCYDVCEGMAFLES 122 (268)
T ss_dssp TTCBHHHHHHHHGG--------GCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHcCC--------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999976532 47788899999999999999994
No 194
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=99.55 E-value=8.1e-15 Score=159.61 Aligned_cols=115 Identities=19% Similarity=0.274 Sum_probs=95.4
Q ss_pred hhcCCCCCCeecccCCeeEEEEEeC-CCcEEEEEEccccChhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEEe
Q 003737 674 ATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYE 752 (799)
Q Consensus 674 ~t~~f~~~~~lG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 752 (799)
..+.|...+.||+|+||.||+|... +++.||||+++... ..+.+.+|++++.+++||||+++++++.+.+..++|||
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 128 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE 128 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence 3466888899999999999999964 68899999997542 34678899999999999999999999999999999999
Q ss_pred cCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 753 YMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 753 y~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
|+++|+|.+++.... .+++..+..++.||++||+|||+
T Consensus 129 ~~~~~~L~~~l~~~~---------~~~~~~~~~i~~qi~~~L~~LH~ 166 (349)
T 2w4o_A 129 LVTGGELFDRIVEKG---------YYSERDAADAVKQILEAVAYLHE 166 (349)
T ss_dssp CCCSCBHHHHHTTCS---------SCCHHHHHHHHHHHHHHHHHHHH
T ss_pred eCCCCCHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999998654 57788999999999999999994
No 195
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=99.55 E-value=1.2e-14 Score=158.95 Aligned_cols=115 Identities=17% Similarity=0.287 Sum_probs=102.0
Q ss_pred hcCCCCCCeecccCCeeEEEEEeC-CCcEEEEEEccccChhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEEec
Q 003737 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEY 753 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 753 (799)
.++|...+.||+|+||.||++... +++.||||++..... ..+.+.+|+.++++++|||||++++++.+.+..++||||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 97 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY 97 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence 356888899999999999999954 789999999975432 346788999999999999999999999999999999999
Q ss_pred CCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 754 MKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 754 ~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
+++|+|.+++...+ .+++..++.++.|+++||+|||+
T Consensus 98 ~~~~~L~~~l~~~~---------~~~~~~~~~i~~ql~~~L~~LH~ 134 (361)
T 3uc3_A 98 ASGGELYERICNAG---------RFSEDEARFFFQQLLSGVSYCHS 134 (361)
T ss_dssp CCSCBHHHHHHHHS---------SCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999997654 57888999999999999999994
No 196
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=99.54 E-value=7.4e-15 Score=167.66 Aligned_cols=118 Identities=22% Similarity=0.409 Sum_probs=102.9
Q ss_pred hhcCCCCCCeecccCCeeEEEEEeC-CCcEEEEEEccccChhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEEe
Q 003737 674 ATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYE 752 (799)
Q Consensus 674 ~t~~f~~~~~lG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 752 (799)
...+|...+.||+|+||.||+|... ++..||||+++... ...++|.+|+++|.+++|||||+++++|.+.+..++|||
T Consensus 218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 296 (495)
T 1opk_A 218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 296 (495)
T ss_dssp CGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred CHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEE
Confidence 4556788899999999999999965 48899999997643 346789999999999999999999999999999999999
Q ss_pred cCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 753 YMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 753 y~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
||++|+|.++++..... .+++..+..++.||++||+|||+
T Consensus 297 ~~~~g~L~~~l~~~~~~-------~~~~~~~~~i~~qi~~~L~~LH~ 336 (495)
T 1opk_A 297 FMTYGNLLDYLRECNRQ-------EVSAVVLLYMATQISSAMEYLEK 336 (495)
T ss_dssp CCTTCBHHHHHHHSCTT-------TSCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHhcCcC-------CCCHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999864322 56787888899999999999994
No 197
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=99.54 E-value=9.2e-15 Score=160.52 Aligned_cols=125 Identities=18% Similarity=0.319 Sum_probs=101.6
Q ss_pred hcCCCCCCeecccCCeeEEEEEe--------CCCcEEEEEEccccC-hhhHHHHHHHHHHHHhC-CCCcccceeEEEEEC
Q 003737 675 TNNFDPANKVGEGGFGSVYKGIL--------SDGTVIAVKQLSSKS-RQGNREFVNEIGMISAQ-QHPNLVKLYGCCVEG 744 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~~--------~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~ 744 (799)
.++|...+.||+|+||.||+|+. .++..||||+++... ....+.+.+|++++.++ +|||||+++++|.+.
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 35677889999999999999984 235689999997653 33457899999999999 899999999999999
Q ss_pred CEEEEEEecCCCCcHHHHHhcCccccc-------ccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 745 NQLLLVYEYMKNNCLSRAIFGKLRIFH-------ISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 745 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~-------~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
+..|+||||+++|+|.+++........ ......+++..+..++.||++||+|||+
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~ 221 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS 221 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999986542100 0011246778889999999999999994
No 198
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=99.54 E-value=4.4e-15 Score=162.07 Aligned_cols=135 Identities=20% Similarity=0.321 Sum_probs=108.2
Q ss_pred cccHHHHHHhhcCCCCCCeecccCCeeEEEEEe------CCCcEEEEEEccccC-hhhHHHHHHHHHHHHhC-CCCcccc
Q 003737 665 LYTLRQIKAATNNFDPANKVGEGGFGSVYKGIL------SDGTVIAVKQLSSKS-RQGNREFVNEIGMISAQ-QHPNLVK 736 (799)
Q Consensus 665 ~~~~~~~~~~t~~f~~~~~lG~G~~g~Vy~~~~------~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l-~H~niv~ 736 (799)
.+...+++...++|...+.||+|+||.||+|.. .+++.||||+++... ....+.+.+|++++.++ +|||||+
T Consensus 11 ~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~ 90 (359)
T 3vhe_A 11 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 90 (359)
T ss_dssp CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred CCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceee
Confidence 345566667788899999999999999999973 246899999997653 33457899999999999 7899999
Q ss_pred eeEEEEECC-EEEEEEecCCCCcHHHHHhcCccccc--------------------------------------------
Q 003737 737 LYGCCVEGN-QLLLVYEYMKNNCLSRAIFGKLRIFH-------------------------------------------- 771 (799)
Q Consensus 737 l~g~~~~~~-~~~lV~Ey~~~GsL~~~L~~~~~~~~-------------------------------------------- 771 (799)
++++|.+.+ ..++||||+++|+|.++++.......
T Consensus 91 ~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (359)
T 3vhe_A 91 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEE 170 (359)
T ss_dssp EEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------------
T ss_pred eeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccc
Confidence 999998755 48999999999999999986542100
Q ss_pred -------------ccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 772 -------------ISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 772 -------------~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
......+++..+..++.||++||+|||+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~ 211 (359)
T 3vhe_A 171 KSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 211 (359)
T ss_dssp -------------CTTTTCBCHHHHHHHHHHHHHHHHHHHH
T ss_pred cccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHH
Confidence 0001127888999999999999999994
No 199
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=99.54 E-value=1.2e-14 Score=163.87 Aligned_cols=116 Identities=23% Similarity=0.399 Sum_probs=100.6
Q ss_pred hhcCCCCCCeecccCCeeEEEEEeCCCcEEEEEEccccChhhHHHHHHHHHHHHhCCCCcccceeEEEEECC-EEEEEEe
Q 003737 674 ATNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGN-QLLLVYE 752 (799)
Q Consensus 674 ~t~~f~~~~~lG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~-~~~lV~E 752 (799)
..++|...+.||+|+||.||+|... |+.||||+++... ..+.|.+|+++|.+++|||||++++++...+ ..++|||
T Consensus 191 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e 267 (450)
T 1k9a_A 191 NMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 267 (450)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEE
T ss_pred ChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEE
Confidence 3466778899999999999999975 7899999997643 4578999999999999999999999988765 7999999
Q ss_pred cCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 753 YMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 753 y~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
||++|+|.++++..+.. .+++..+..++.||++||+|||+
T Consensus 268 ~~~~g~L~~~l~~~~~~-------~~~~~~~~~~~~qi~~~l~~LH~ 307 (450)
T 1k9a_A 268 YMAKGSLVDYLRSRGRS-------VLGGDCLLKFSLDVCEAMEYLEG 307 (450)
T ss_dssp CCTTCBHHHHHHHHCTT-------TCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCCCcHHHHHHhcCCC-------CCCHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999865421 36788888999999999999994
No 200
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.54 E-value=1.5e-14 Score=152.26 Aligned_cols=120 Identities=24% Similarity=0.473 Sum_probs=103.1
Q ss_pred hcCCCCCCeecccCCeeEEEEEeC-CCcEEEEEEcccc--ChhhHHHHHHHHHHHHhC-CCCcccceeEEEEECCEEEEE
Q 003737 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSK--SRQGNREFVNEIGMISAQ-QHPNLVKLYGCCVEGNQLLLV 750 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV 750 (799)
+++|+..+.||+|+||.||+|... +++.||||++... .......+.+|+..+.++ +||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv 89 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ 89 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 456888899999999999999964 7899999999754 233457889999999999 999999999999999999999
Q ss_pred EecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 751 YEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 751 ~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
|||+++|+|.+++...... ...+++..+..++.||++||+|||+
T Consensus 90 ~e~~~~~~L~~~l~~~~~~-----~~~~~~~~~~~i~~qi~~al~~lH~ 133 (289)
T 1x8b_A 90 NEYCNGGSLADAISENYRI-----MSYFKEAELKDLLLQVGRGLRYIHS 133 (289)
T ss_dssp EECCTTCBHHHHHHHHHHH-----TCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecCCCcHHHHHHhhccc-----ccCCCHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999764311 1157888999999999999999994
No 201
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=99.54 E-value=9.2e-15 Score=158.42 Aligned_cols=127 Identities=23% Similarity=0.357 Sum_probs=104.0
Q ss_pred HhhcCCCCCCeecccCCeeEEEEEeC------CCcEEEEEEccccC-hhhHHHHHHHHHHHHhCCCCcccceeEEEEECC
Q 003737 673 AATNNFDPANKVGEGGFGSVYKGILS------DGTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGN 745 (799)
Q Consensus 673 ~~t~~f~~~~~lG~G~~g~Vy~~~~~------~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~ 745 (799)
...++|...+.||+|+||.||+|... +++.||||+++... ....+.|.+|++++.+++||||+++++++.+.+
T Consensus 44 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 123 (343)
T 1luf_A 44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGK 123 (343)
T ss_dssp CCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred ecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCC
Confidence 34577888999999999999999963 34899999997653 334578999999999999999999999999999
Q ss_pred EEEEEEecCCCCcHHHHHhcCccccc---------------ccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 746 QLLLVYEYMKNNCLSRAIFGKLRIFH---------------ISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 746 ~~~lV~Ey~~~GsL~~~L~~~~~~~~---------------~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
..++||||+++|+|.+++........ ......+++..+..++.||++||+|||+
T Consensus 124 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~ 192 (343)
T 1luf_A 124 PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE 192 (343)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999986431100 0011367888899999999999999994
No 202
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=99.54 E-value=1.2e-14 Score=155.49 Aligned_cols=117 Identities=24% Similarity=0.414 Sum_probs=100.1
Q ss_pred hhcCCCCCCeecccCCeeEEEEEeCCCcEEEEEEccccC--hhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEE
Q 003737 674 ATNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 751 (799)
Q Consensus 674 ~t~~f~~~~~lG~G~~g~Vy~~~~~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 751 (799)
..++|+..+.||+|+||.||+|...+|+.||+|++.... ....+.+.+|++++.+++|||||++++++.+++..++||
T Consensus 19 l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 98 (311)
T 3niz_A 19 LMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVF 98 (311)
T ss_dssp SSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEE
T ss_pred hHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEE
Confidence 346788899999999999999998889999999996542 223467899999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 752 EYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 752 Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
||+++ +|.+++..... .+++..+..++.|+++||+|||+
T Consensus 99 e~~~~-~l~~~~~~~~~--------~~~~~~~~~~~~qi~~~l~~LH~ 137 (311)
T 3niz_A 99 EFMEK-DLKKVLDENKT--------GLQDSQIKIYLYQLLRGVAHCHQ 137 (311)
T ss_dssp ECCSE-EHHHHHHTCTT--------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCC-CHHHHHHhccC--------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 99984 88888876432 57888999999999999999994
No 203
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=99.54 E-value=7.8e-15 Score=162.10 Aligned_cols=116 Identities=17% Similarity=0.291 Sum_probs=100.1
Q ss_pred hcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccC---hhhHHHHHHHHHHHHhC-CCCcccceeEEEEECCEEEE
Q 003737 675 TNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKS---RQGNREFVNEIGMISAQ-QHPNLVKLYGCCVEGNQLLL 749 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~l 749 (799)
.++|+..+.||+|+||+||+++. .+++.||+|++++.. ....+.+.+|..++.++ +|||||++++++.+.+..++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 35688889999999999999995 468899999997642 22335688999999886 89999999999999999999
Q ss_pred EEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 750 VYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 750 V~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
||||+++|+|.+++...+ .+++..++.|+.||+.||+|||+
T Consensus 131 V~E~~~gg~L~~~l~~~~---------~l~~~~~~~~~~qi~~aL~~LH~ 171 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQR---------KLPEEHARFYSAEISLALNYLHE 171 (396)
T ss_dssp EEECCTTCBHHHHHHHHS---------SCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEcCCCCcHHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998654 57899999999999999999994
No 204
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=99.54 E-value=1.5e-14 Score=155.35 Aligned_cols=118 Identities=17% Similarity=0.280 Sum_probs=100.8
Q ss_pred cCCCCCCeecccCCeeEEEEEeC-CCcEEEEEEccccC-hhhHHHHHHHHHHHHhCCCCcccceeEEEEECC--EEEEEE
Q 003737 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGN--QLLLVY 751 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~--~~~lV~ 751 (799)
++|...+.||+|+||.||+|... +|+.||||++.... ....+.+.+|++++.+++||||+++++++...+ ..++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 45778899999999999999964 68999999997543 234577899999999999999999999998765 789999
Q ss_pred ecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 752 EYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 752 Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
||+++|+|.+++...... ..+++..+..++.||++||+|||+
T Consensus 89 e~~~~~~L~~~l~~~~~~------~~~~~~~~~~i~~qi~~~L~~LH~ 130 (319)
T 4euu_A 89 EFCPCGSLYTVLEEPSNA------YGLPESEFLIVLRDVVGGMNHLRE 130 (319)
T ss_dssp ECCTTCBHHHHHHSGGGT------TCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred eCCCCCCHHHHHHHhccc------cCCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999865421 137888999999999999999994
No 205
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=99.54 E-value=9.2e-15 Score=164.18 Aligned_cols=116 Identities=16% Similarity=0.287 Sum_probs=101.3
Q ss_pred hcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccC--hhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEE
Q 003737 675 TNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 751 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 751 (799)
.++|+..+.||+|+||.||+|.. .+|+.||+|++.... ....+.+.+|++++.+++|||||++++++.+++..++||
T Consensus 10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~ 89 (444)
T 3soa_A 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIF 89 (444)
T ss_dssp HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEE
T ss_pred cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEE
Confidence 45688899999999999999984 578999999997643 234567999999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 752 EYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 752 Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
||+++|+|.+++..+. .+++..+..++.||++||+|||+
T Consensus 90 E~~~gg~L~~~i~~~~---------~~~e~~~~~i~~qil~aL~~lH~ 128 (444)
T 3soa_A 90 DLVTGGELFEDIVARE---------YYSEADASHCIQQILEAVLHCHQ 128 (444)
T ss_dssp CCCBCCBHHHHHHHCS---------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EeCCCCCHHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998764 57888999999999999999994
No 206
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=99.54 E-value=3e-14 Score=150.80 Aligned_cols=117 Identities=19% Similarity=0.271 Sum_probs=99.5
Q ss_pred CCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccChhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEEecCC
Q 003737 677 NFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYMK 755 (799)
Q Consensus 677 ~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~ 755 (799)
+|.....||+|+||.||+|.. .+++.||||.+........+.+.+|++++.+++||||+++++++.+.+..++||||++
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 102 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVP 102 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCC
Confidence 455567999999999999994 5788999999977655556789999999999999999999999999999999999999
Q ss_pred CCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 756 NNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 756 ~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
+|+|.+++...... ..+++..+..++.||+.||+|||+
T Consensus 103 ~~~L~~~l~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~ 140 (295)
T 2clq_A 103 GGSLSALLRSKWGP------LKDNEQTIGFYTKQILEGLKYLHD 140 (295)
T ss_dssp EEEHHHHHHHTTCC------CTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHhhccC------CCccHHHHHHHHHHHHHHHHHHHh
Confidence 99999999764321 245677888899999999999994
No 207
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=99.54 E-value=1.2e-14 Score=154.75 Aligned_cols=116 Identities=17% Similarity=0.284 Sum_probs=99.7
Q ss_pred hcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccChhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEEec
Q 003737 675 TNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEY 753 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 753 (799)
.++|...+.||+|+||.||++.. .+|+.||+|+++.......+.+.+|++++.+++||||+++++++.+.+..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL 87 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence 34578889999999999999995 47899999999765544556799999999999999999999999999999999999
Q ss_pred CCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 754 MKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 754 ~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
+++|+|.+++.... .+++..+..++.|++.||+|||+
T Consensus 88 ~~~~~L~~~l~~~~---------~~~~~~~~~~~~qi~~~l~~lH~ 124 (304)
T 2jam_A 88 VSGGELFDRILERG---------VYTEKDASLVIQQVLSAVKYLHE 124 (304)
T ss_dssp CCSCBHHHHHHHHS---------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCccHHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999997654 57788999999999999999994
No 208
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=99.53 E-value=2.1e-14 Score=151.11 Aligned_cols=116 Identities=22% Similarity=0.360 Sum_probs=102.6
Q ss_pred hcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEcccc--ChhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEE
Q 003737 675 TNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSK--SRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 751 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 751 (799)
.++|+..+.||+|+||.||+|.. .+|+.||+|++... .....+.+.+|++++.+++||||+++++++.+.+..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 46788899999999999999995 46899999998654 2334578899999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 752 EYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 752 Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
||+++|+|.+++..+. .+++..+..++.|++.||+|||+
T Consensus 85 e~~~~~~l~~~~~~~~---------~~~~~~~~~~~~~i~~~l~~lH~ 123 (284)
T 3kk8_A 85 DLVTGGELFEDIVARE---------FYSEADASHCIQQILESIAYCHS 123 (284)
T ss_dssp CCCCSCBHHHHHHHHS---------SCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCCCCCHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999987654 57888999999999999999994
No 209
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.53 E-value=1.7e-14 Score=150.34 Aligned_cols=115 Identities=23% Similarity=0.477 Sum_probs=101.7
Q ss_pred cCCCCCCeecccCCeeEEEEEeCCCcEEEEEEccccChhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEEecCC
Q 003737 676 NNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYMK 755 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~ 755 (799)
++|...+.||+|+||.||+|...+++.||+|++..... ..+.+.+|++++.+++||||+++++++.+.+..++||||++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 86 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFME 86 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCT
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCC
Confidence 45777889999999999999988888999999976532 34689999999999999999999999999999999999999
Q ss_pred CCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 756 NNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 756 ~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
+|+|.+++..... .+++..+..++.|+++||+|||+
T Consensus 87 ~~~L~~~~~~~~~--------~~~~~~~~~~~~~i~~~l~~lH~ 122 (267)
T 3t9t_A 87 HGCLSDYLRTQRG--------LFAAETLLGMCLDVCEGMAYLEE 122 (267)
T ss_dssp TCBHHHHHHHTTT--------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHhhCcc--------cCCHHHHHHHHHHHHHHHHHHHh
Confidence 9999999976532 46788889999999999999994
No 210
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=99.53 E-value=1.6e-14 Score=166.13 Aligned_cols=118 Identities=23% Similarity=0.315 Sum_probs=103.0
Q ss_pred hcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccC---hhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEE
Q 003737 675 TNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKS---RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLV 750 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 750 (799)
.++|...+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|++++.+++|||||++++++.+.+..++|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 35688889999999999999996 479999999996532 23356789999999999999999999999999999999
Q ss_pred EecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 751 YEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 751 ~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
||||++|+|.+++...... .+++..++.|+.||+.||+|||+
T Consensus 263 mEy~~gg~L~~~l~~~~~~-------~l~e~~~~~i~~qIl~aL~yLH~ 304 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMGQA-------GFPEARAVFYAAEICCGLEDLHR 304 (576)
T ss_dssp ECCCCSCBHHHHHHSSSSC-------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEcCCCCcHHHHHHhcCCC-------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999865422 58899999999999999999994
No 211
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=99.53 E-value=1.6e-14 Score=163.53 Aligned_cols=115 Identities=22% Similarity=0.329 Sum_probs=102.0
Q ss_pred cCCCCCCeecccCCeeEEEEEeC-CCcEEEEEEccccCh---hhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEE
Q 003737 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSR---QGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 751 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 751 (799)
++|...+.||+|+||.||+|... +|+.||||++..... ...+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 56778899999999999999964 799999999965421 23467999999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 752 EYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 752 Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
||+++|+|.+++...+ .+++..+..++.||+.||+|||+
T Consensus 96 E~~~gg~L~~~l~~~~---------~l~~~~~~~i~~qi~~aL~~LH~ 134 (476)
T 2y94_A 96 EYVSGGELFDYICKNG---------RLDEKESRRLFQQILSGVDYCHR 134 (476)
T ss_dssp ECCSSEEHHHHTTSSS---------SCCHHHHHHHHHHHHHHHHHHHT
T ss_pred eCCCCCcHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999997654 57888999999999999999995
No 212
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=99.53 E-value=1.1e-14 Score=164.24 Aligned_cols=119 Identities=22% Similarity=0.364 Sum_probs=101.9
Q ss_pred HHhhcCCCCCCeecccCCeeEEEEEeCCCcEEEEEEccccChhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEE
Q 003737 672 KAATNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 751 (799)
Q Consensus 672 ~~~t~~f~~~~~lG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 751 (799)
+...++|...+.||+|+||.||+|...++..||||+++... ...+.|.+|+++|.+++|||||++++++.+ +..++||
T Consensus 180 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~ 257 (452)
T 1fmk_A 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 257 (452)
T ss_dssp BCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred ccChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEe
Confidence 34556788889999999999999998877889999997643 345789999999999999999999999865 6789999
Q ss_pred ecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 752 EYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 752 Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
|||++|+|.++++..... .+++..+..++.||++||+|||+
T Consensus 258 e~~~~gsL~~~l~~~~~~-------~~~~~~~~~i~~qi~~~l~~LH~ 298 (452)
T 1fmk_A 258 EYMSKGSLLDFLKGETGK-------YLRLPQLVDMAAQIASGMAYVER 298 (452)
T ss_dssp CCCTTCBHHHHHSHHHHT-------TCCHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhcCCCHHHHHHhcCCC-------CCCHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999753211 46778888999999999999994
No 213
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=99.53 E-value=3.5e-14 Score=153.00 Aligned_cols=107 Identities=22% Similarity=0.293 Sum_probs=96.1
Q ss_pred CCeecccCCeeEEEEEe-CCCcEEEEEEccccChhhHHHHHHHHHHHHhCC-CCcccceeEEEEECCEEEEEEecCCCCc
Q 003737 681 ANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQ-HPNLVKLYGCCVEGNQLLLVYEYMKNNC 758 (799)
Q Consensus 681 ~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~Ey~~~Gs 758 (799)
.+.||+|+||.||+|.. .+|+.||||++... ....+.+|++++.+++ |||||++++++.+.+..++||||+++|+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 92 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE 92 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence 47899999999999996 47899999999643 3467889999999997 9999999999999999999999999999
Q ss_pred HHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 759 LSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 759 L~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
|.+++.... .+++..+..++.||++||+|||+
T Consensus 93 L~~~l~~~~---------~~~~~~~~~i~~qi~~~l~~LH~ 124 (325)
T 3kn6_A 93 LFERIKKKK---------HFSETEASYIMRKLVSAVSHMHD 124 (325)
T ss_dssp HHHHHHHCS---------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 999998754 57888999999999999999994
No 214
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=99.53 E-value=2e-14 Score=154.57 Aligned_cols=113 Identities=17% Similarity=0.273 Sum_probs=96.5
Q ss_pred hcCCCCCCeecccCCeeEEEEEeCCCcEEEEEEccccChhhHHHHHHHHHHHHhCCCCcccceeEEEEECC----EEEEE
Q 003737 675 TNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGN----QLLLV 750 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~----~~~lV 750 (799)
.++|+..+.||+|+||.||+|+.. ++.||||++.... .....+.+|+.++.+++|||||++++++.... ..++|
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv 100 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLI 100 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEE
Confidence 356788899999999999999875 7899999996543 23446677999999999999999999998744 47999
Q ss_pred EecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 751 YEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 751 ~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
|||+++|+|.++++.+ .+++..+..++.|+++||+|||+
T Consensus 101 ~e~~~~g~L~~~l~~~----------~~~~~~~~~i~~qi~~al~~LH~ 139 (322)
T 3soc_A 101 TAFHEKGSLSDFLKAN----------VVSWNELCHIAETMARGLAYLHE 139 (322)
T ss_dssp EECCTTCBHHHHHHHC----------CBCHHHHHHHHHHHHHHHHHHTC
T ss_pred EecCCCCCHHHHHHhc----------CCCHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999764 46677889999999999999995
No 215
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=99.53 E-value=2e-14 Score=151.24 Aligned_cols=115 Identities=16% Similarity=0.306 Sum_probs=101.1
Q ss_pred cCCCCCCeecccCCeeEEEEEeC-CCcEEEEEEccccCh------hhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEE
Q 003737 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSR------QGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLL 748 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~------~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 748 (799)
++|...+.||+|+||.||++... +|+.||+|.+..... ...+.+.+|++++.+++||||+++++++.+.+..+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 45778899999999999999964 789999999865421 13578999999999999999999999999999999
Q ss_pred EEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 749 LVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 749 lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
+||||+++|+|.+++.... .+++..+..++.||++||+|||+
T Consensus 85 lv~e~~~~~~L~~~l~~~~---------~~~~~~~~~~~~~i~~~l~~lH~ 126 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEKE---------SLTEDEATQFLKQILDGVHYLHS 126 (283)
T ss_dssp EEEECCCSCBHHHHHHHHS---------SCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeecCCCcHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999997543 57788999999999999999994
No 216
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=99.52 E-value=1.7e-14 Score=155.05 Aligned_cols=115 Identities=17% Similarity=0.280 Sum_probs=101.2
Q ss_pred cCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccCh------hhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEE
Q 003737 676 NNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSR------QGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLL 748 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~------~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 748 (799)
+.|...+.||+|+||.||+|.. .+|+.||||.+..... ...+.+.+|++++.+++||||+++++++.+.+..+
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 91 (321)
T 2a2a_A 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVV 91 (321)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred ccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence 4577889999999999999995 4789999999965422 13578999999999999999999999999999999
Q ss_pred EEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 749 LVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 749 lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
+||||+++|+|.+++.... .+++..+..++.|+++||+|||+
T Consensus 92 lv~e~~~~~~L~~~l~~~~---------~~~~~~~~~i~~qi~~aL~~lH~ 133 (321)
T 2a2a_A 92 LILELVSGGELFDFLAQKE---------SLSEEEATSFIKQILDGVNYLHT 133 (321)
T ss_dssp EEECCCCSCBHHHHHHTCS---------CEEHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEcCCCCcHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999997654 56788899999999999999994
No 217
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=99.52 E-value=2.8e-14 Score=152.43 Aligned_cols=115 Identities=23% Similarity=0.406 Sum_probs=101.3
Q ss_pred cCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccCh--hhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEEe
Q 003737 676 NNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSR--QGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYE 752 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 752 (799)
++|+..+.||+|+||.||+|.. .+|+.||||++..... ...+.+.+|++++.+++||||+++++++.+.+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 5688889999999999999996 4689999999865432 235678999999999999999999999999999999999
Q ss_pred cCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 753 YMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 753 y~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
|+++|+|.+++.... .+++..+..++.|+++||+|||+
T Consensus 83 ~~~~~~l~~~~~~~~---------~~~~~~~~~i~~~l~~~l~~lH~ 120 (311)
T 4agu_A 83 YCDHTVLHELDRYQR---------GVPEHLVKSITWQTLQAVNFCHK 120 (311)
T ss_dssp CCSEEHHHHHHHTSS---------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred eCCCchHHHHHhhhc---------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999887654 57788999999999999999994
No 218
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=99.52 E-value=2e-14 Score=151.72 Aligned_cols=119 Identities=20% Similarity=0.310 Sum_probs=102.0
Q ss_pred cCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccC-hhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEEec
Q 003737 676 NNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEY 753 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 753 (799)
++|...+.||+|+||.||++.. .++..||+|++.... ....+.+.+|++++.+++||||+++++++.+.+..++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 101 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET 101 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence 4577889999999999999995 568999999987653 33467899999999999999999999999999999999999
Q ss_pred CCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 754 MKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 754 ~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
+++|+|.+++...... ...+++..+..++.|+++||+|||+
T Consensus 102 ~~~~~L~~~l~~~~~~-----~~~~~~~~~~~i~~qi~~~L~~LH~ 142 (285)
T 3is5_A 102 CEGGELLERIVSAQAR-----GKALSEGYVAELMKQMMNALAYFHS 142 (285)
T ss_dssp CSCCBHHHHHHHHHHH-----TCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcHHHHHHhhhhc-----ccCCCHHHHHHHHHHHHHHHHHHHh
Confidence 9999999998643211 1157888999999999999999994
No 219
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=99.52 E-value=1.5e-14 Score=158.57 Aligned_cols=122 Identities=23% Similarity=0.282 Sum_probs=102.2
Q ss_pred cCCCCCCeecccCCeeEEEEEeC------CCcEEEEEEcccc-ChhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEE
Q 003737 676 NNFDPANKVGEGGFGSVYKGILS------DGTVIAVKQLSSK-SRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLL 748 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~~------~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 748 (799)
++|...+.||+|+||.||+|... +++.||||+++.. .......+.+|++++.+++|||||++++++.+.+..+
T Consensus 71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 150 (367)
T 3l9p_A 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF 150 (367)
T ss_dssp GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCE
Confidence 55778899999999999999843 4678999999754 3445568999999999999999999999999999999
Q ss_pred EEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 749 LVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 749 lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
+||||+++|+|.+++....... .....+++..+..++.||++||+|||+
T Consensus 151 lv~e~~~~g~L~~~l~~~~~~~--~~~~~~~~~~~~~i~~qi~~aL~~LH~ 199 (367)
T 3l9p_A 151 ILLELMAGGDLKSFLRETRPRP--SQPSSLAMLDLLHVARDIACGCQYLEE 199 (367)
T ss_dssp EEEECCTTEEHHHHHHHHSCCS--SSCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCHHHHHHhhcccc--CccccccHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999998653211 112257788899999999999999994
No 220
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=99.52 E-value=2.8e-14 Score=151.07 Aligned_cols=115 Identities=18% Similarity=0.341 Sum_probs=97.9
Q ss_pred cCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccC--hhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEEe
Q 003737 676 NNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYE 752 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 752 (799)
++|+..+.||+|+||+||+|.. .+|+.||||++.... ....+.+.+|++++.+++||||+++++++.+++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 4678889999999999999995 478999999996543 3335788999999999999999999999999999999999
Q ss_pred cCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 753 YMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 753 y~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
|+++ ++.+.+..... .+++..+..++.|+++||+|||+
T Consensus 82 ~~~~-~l~~~~~~~~~--------~l~~~~~~~~~~ql~~~l~~lH~ 119 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSCNG--------DLDPEIVKSFLFQLLKGLGFCHS 119 (292)
T ss_dssp CCSE-EHHHHHHHTTT--------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCC-CHHHHHHhCCC--------CCCHHHHHHHHHHHHHHHHHHHh
Confidence 9986 66666654322 57888999999999999999994
No 221
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=99.52 E-value=2.1e-14 Score=150.04 Aligned_cols=113 Identities=26% Similarity=0.486 Sum_probs=95.2
Q ss_pred cCCCCCCeecccCCeeEEEEEeCCCcEEEEEEccccCh----hhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEE
Q 003737 676 NNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSR----QGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 751 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~----~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 751 (799)
++|+..+.||+|+||.||+|... |+.||||+++.... ...+.+.+|++++.+++||||+++++++.+.+..++||
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVM 85 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEE
T ss_pred hheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEE
Confidence 56788899999999999999974 88999999865422 23468999999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 752 EYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 752 Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
||+++|+|.+++..+ .+++..+..++.|+++||+|||+
T Consensus 86 e~~~~~~L~~~~~~~----------~~~~~~~~~i~~~l~~~l~~lH~ 123 (271)
T 3dtc_A 86 EFARGGPLNRVLSGK----------RIPPDILVNWAVQIARGMNYLHD 123 (271)
T ss_dssp ECCTTEEHHHHHTSS----------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EcCCCCCHHHHhhcC----------CCCHHHHHHHHHHHHHHHHHHHh
Confidence 999999999998643 56788899999999999999994
No 222
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=99.52 E-value=1.3e-14 Score=158.08 Aligned_cols=116 Identities=21% Similarity=0.234 Sum_probs=102.0
Q ss_pred hcCCCCCCeecccCCeeEEEEEeC-CCcEEEEEEccccC---hhhHHHHHHHHHHHHhC-CCCcccceeEEEEECCEEEE
Q 003737 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS---RQGNREFVNEIGMISAQ-QHPNLVKLYGCCVEGNQLLL 749 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~l 749 (799)
.++|+..+.||+|+||.||+|... +|+.||||+++... ....+.+.+|.+++..+ +||+|+++++++.+.+..|+
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 98 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 98 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence 467888999999999999999964 58899999997542 23456788999999988 89999999999999999999
Q ss_pred EEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 750 VYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 750 V~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
||||+++|+|.+++...+ .+++..++.++.||+.||+|||+
T Consensus 99 v~E~~~gg~L~~~l~~~~---------~~~~~~~~~~~~qi~~aL~~LH~ 139 (353)
T 2i0e_A 99 VMEYVNGGDLMYHIQQVG---------RFKEPHAVFYAAEIAIGLFFLQS 139 (353)
T ss_dssp EEECCCSCBHHHHHHHHS---------SCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCCCCcHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998654 57888999999999999999994
No 223
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=99.52 E-value=2.1e-14 Score=150.73 Aligned_cols=116 Identities=21% Similarity=0.416 Sum_probs=101.6
Q ss_pred cCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccC---hhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEE
Q 003737 676 NNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKS---RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 751 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 751 (799)
++|...+.||+|+||.||+|+. .+|+.||||.+.... ....+.+.+|++++.+++||||+++++++.+.+..++||
T Consensus 11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (278)
T 3cok_A 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVL 90 (278)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEE
Confidence 5688889999999999999995 578999999996532 123468999999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 752 EYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 752 Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
||+++|+|.+++..... .+++..+..++.|+++||+|||+
T Consensus 91 e~~~~~~L~~~l~~~~~--------~~~~~~~~~~~~qi~~~l~~lH~ 130 (278)
T 3cok_A 91 EMCHNGEMNRYLKNRVK--------PFSENEARHFMHQIITGMLYLHS 130 (278)
T ss_dssp ECCTTEEHHHHHHTCSS--------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCCCCcHHHHHhhccC--------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999986532 57788999999999999999994
No 224
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=99.52 E-value=9.1e-15 Score=154.29 Aligned_cols=119 Identities=22% Similarity=0.403 Sum_probs=103.4
Q ss_pred HhhcCCCCCCeecccCCeeEEEEEeC-CCcEEEEEEccccChhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEE
Q 003737 673 AATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 751 (799)
Q Consensus 673 ~~t~~f~~~~~lG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 751 (799)
...++|...+.||+|+||.||+|... ++..||+|.+.... ...+.+.+|++++.+++||||+++++++.+.+..++||
T Consensus 10 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 88 (288)
T 3kfa_A 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 88 (288)
T ss_dssp CCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEE
T ss_pred ccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEE
Confidence 34566888899999999999999964 58899999997543 34578999999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 752 EYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 752 Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
||+++|+|.+++...... .+++..+..++.|++.||+|||+
T Consensus 89 e~~~~~~L~~~~~~~~~~-------~~~~~~~~~i~~~i~~~l~~lH~ 129 (288)
T 3kfa_A 89 EFMTYGNLLDYLRECNRQ-------EVSAVVLLYMATQISSAMEYLEK 129 (288)
T ss_dssp ECCTTEEHHHHHHHCCTT-------TSCHHHHHHHHHHHHHHHHHHHH
T ss_pred EcCCCCcHHHHHHhcccC-------CccHhHHHHHHHHHHHHHHHHHH
Confidence 999999999999864322 57788899999999999999994
No 225
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=99.52 E-value=1.9e-14 Score=151.15 Aligned_cols=117 Identities=23% Similarity=0.405 Sum_probs=101.7
Q ss_pred hhcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccC---hhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEE
Q 003737 674 ATNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKS---RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLL 749 (799)
Q Consensus 674 ~t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 749 (799)
+.++|+..+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|++++.+++||||+++++++.+.+..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 86 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence 345688889999999999999985 467899999986532 2234679999999999999999999999999999999
Q ss_pred EEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 750 VYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 750 V~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
||||+++|+|.+++.... .+++..+..++.|++.||+|||+
T Consensus 87 v~e~~~~~~l~~~l~~~~---------~~~~~~~~~~~~qi~~~l~~LH~ 127 (279)
T 3fdn_A 87 ILEYAPLGTVYRELQKLS---------KFDEQRTATYITELANALSYCHS 127 (279)
T ss_dssp EECCCTTEEHHHHHHHHS---------SCCHHHHHHHHHHHHHHHHHHHT
T ss_pred EEecCCCCcHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999997654 57788899999999999999995
No 226
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=99.52 E-value=2.7e-14 Score=151.76 Aligned_cols=118 Identities=22% Similarity=0.455 Sum_probs=101.1
Q ss_pred hhcCCCCCCeecccCCeeEEEEEeC-CCcEEEEEEccccChhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEEe
Q 003737 674 ATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYE 752 (799)
Q Consensus 674 ~t~~f~~~~~lG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 752 (799)
..+.|+..+.||+|+||.||+|... +++.||+|.+........+.+.+|++++.+++||||+++++++...+..++|||
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 96 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE 96 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence 3466888899999999999999964 689999999977655667889999999999999999999999999999999999
Q ss_pred cCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 753 YMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 753 y~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
|+++|+|.+++..... .+++..+..++.||++||+|||+
T Consensus 97 ~~~~~~l~~~~~~~~~--------~~~~~~~~~~~~~i~~~l~~lH~ 135 (302)
T 2j7t_A 97 FCPGGAVDAIMLELDR--------GLTEPQIQVVCRQMLEALNFLHS 135 (302)
T ss_dssp CCTTEEHHHHHHHHTS--------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred eCCCCcHHHHHHhhcc--------CCCHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999875332 57788999999999999999994
No 227
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=99.52 E-value=7.4e-15 Score=157.11 Aligned_cols=116 Identities=20% Similarity=0.240 Sum_probs=99.5
Q ss_pred hcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccC---hhhHHHHHHHHHHHHhCCCCcccceeEEEEECC----E
Q 003737 675 TNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKS---RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGN----Q 746 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~----~ 746 (799)
.++|+..+.||+|+||.||++.. .+++.||||+++... ....+.|.+|++++.+++||||+++++++.... .
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 35688889999999999999994 678999999997643 233467999999999999999999999987654 3
Q ss_pred EEEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 747 LLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 747 ~~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
.++||||+++|+|.++++... .+++..+..++.|+++||+|||+
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~~---------~~~~~~~~~~~~qi~~~l~~lH~ 134 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTEG---------PMTPKRAIEVIADACQALNFSHQ 134 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHHC---------SCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cEEEEecCCCCCHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 499999999999999998654 57788899999999999999994
No 228
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.52 E-value=1.9e-14 Score=164.75 Aligned_cols=117 Identities=20% Similarity=0.335 Sum_probs=100.3
Q ss_pred hhcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccCh-------------hhHHHHHHHHHHHHhCCCCcccceeE
Q 003737 674 ATNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSR-------------QGNREFVNEIGMISAQQHPNLVKLYG 739 (799)
Q Consensus 674 ~t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~-------------~~~~~f~~E~~~l~~l~H~niv~l~g 739 (799)
..++|...+.||+|+||.||+|.. .+++.||||++..... ...+.+.+|++++.+++|||||++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 456788999999999999999995 4688999999865421 23467999999999999999999999
Q ss_pred EEEECCEEEEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 740 CCVEGNQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 740 ~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
++.+.+..++||||+++|+|.+++.... .+++..+..++.||+.||+|||+
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~---------~~~~~~~~~i~~qi~~~l~~lH~ 164 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIINRH---------KFDECDAANIMKQILSGICYLHK 164 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHHS---------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999997654 57888999999999999999994
No 229
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=99.52 E-value=2.5e-14 Score=151.22 Aligned_cols=115 Identities=23% Similarity=0.367 Sum_probs=100.3
Q ss_pred cCCCCCCeecccCCeeEEEEEeCCCcEEEEEEccccCh--hhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEEec
Q 003737 676 NNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSR--QGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEY 753 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 753 (799)
++|...+.||+|+||.||+|...+|+.||||++..... ...+.+.+|++++.+++||||+++++++.+.+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 46778899999999999999988899999999965432 2346889999999999999999999999999999999999
Q ss_pred CCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 754 MKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 754 ~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
+++ +|.+++..... .+++..+..++.||++||+|||+
T Consensus 82 ~~~-~l~~~~~~~~~--------~~~~~~~~~~~~qi~~~l~~lH~ 118 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCEG--------GLESVTAKSFLLQLLNGIAYCHD 118 (288)
T ss_dssp CSE-EHHHHHHTSTT--------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCC-CHHHHHHhccc--------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 985 99999876432 57788899999999999999994
No 230
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=99.51 E-value=3e-14 Score=153.53 Aligned_cols=116 Identities=23% Similarity=0.388 Sum_probs=101.2
Q ss_pred cCCCCCCeecccCCeeEEEEEe-----CCCcEEEEEEccccChhhHHHHHHHHHHHHhCCCCcccceeEEEEE--CCEEE
Q 003737 676 NNFDPANKVGEGGFGSVYKGIL-----SDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVE--GNQLL 748 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~-----~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~--~~~~~ 748 (799)
++|+..+.||+|+||.||+|+. .+++.||||++........+.+.+|++++.+++|+||+++++++.. .+..+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 102 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR 102 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence 4577789999999999999984 4688999999987766667789999999999999999999999874 56789
Q ss_pred EEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 749 LVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 749 lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
+||||+++|+|.+++..... .+++..+..++.|++.||+|||+
T Consensus 103 lv~e~~~~~~L~~~l~~~~~--------~~~~~~~~~i~~qi~~al~~lH~ 145 (327)
T 3lxl_A 103 LVMEYLPSGCLRDFLQRHRA--------RLDASRLLLYSSQICKGMEYLGS 145 (327)
T ss_dssp EEEECCTTCBHHHHHHHHGG--------GCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeecCCCCHHHHHHhccc--------CCCHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999976432 46788899999999999999994
No 231
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=99.51 E-value=1.5e-14 Score=156.48 Aligned_cols=114 Identities=20% Similarity=0.303 Sum_probs=100.1
Q ss_pred cCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccC---hhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEE
Q 003737 676 NNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKS---RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 751 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 751 (799)
++|...+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 88 (336)
T 3h4j_B 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI 88 (336)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 5688889999999999999995 678999999986532 122467999999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 752 EYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 752 Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
||+ +|+|.+++..+. .+++..+..++.||++||+|||+
T Consensus 89 E~~-~g~l~~~l~~~~---------~l~~~~~~~i~~qi~~aL~~LH~ 126 (336)
T 3h4j_B 89 EYA-GGELFDYIVEKK---------RMTEDEGRRFFQQIICAIEYCHR 126 (336)
T ss_dssp CCC-CEEHHHHHHHHC---------SCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ECC-CCcHHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 999 789999997654 57888999999999999999994
No 232
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=99.51 E-value=2.1e-14 Score=153.45 Aligned_cols=125 Identities=24% Similarity=0.415 Sum_probs=102.0
Q ss_pred hcCCCCCCeecccCCeeEEEEEe------CCCcEEEEEEccccC-hhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEE
Q 003737 675 TNNFDPANKVGEGGFGSVYKGIL------SDGTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQL 747 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~~------~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~ 747 (799)
.++|...+.||+|+||.||+|.. .+++.||||+++... ....+.+.+|++++.+++||||+++++++.+.+..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 101 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL 101 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence 45677889999999999999984 245789999997643 34457899999999999999999999999999999
Q ss_pred EEEEecCCCCcHHHHHhcCccccc---------------ccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 748 LLVYEYMKNNCLSRAIFGKLRIFH---------------ISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 748 ~lV~Ey~~~GsL~~~L~~~~~~~~---------------~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
++||||+++|+|.+++........ ......+++..+..++.||++||+|||+
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~ 168 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE 168 (314)
T ss_dssp EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999986532100 0011236788899999999999999994
No 233
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=99.51 E-value=1.5e-14 Score=166.80 Aligned_cols=119 Identities=22% Similarity=0.364 Sum_probs=101.9
Q ss_pred HHhhcCCCCCCeecccCCeeEEEEEeCCCcEEEEEEccccChhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEE
Q 003737 672 KAATNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 751 (799)
Q Consensus 672 ~~~t~~f~~~~~lG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 751 (799)
+...++|...+.||+|+||.||+|...++..||||+++... ...++|.+|+++|.+++|+|||++++++.+ +..++||
T Consensus 263 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~ 340 (535)
T 2h8h_A 263 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 340 (535)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred ecchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEee
Confidence 34556688889999999999999998878889999997643 345789999999999999999999999865 6789999
Q ss_pred ecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 752 EYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 752 Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
|||++|+|.++++..... .+++..+..++.||++||+|||+
T Consensus 341 e~~~~gsL~~~l~~~~~~-------~l~~~~~~~i~~qi~~~L~~LH~ 381 (535)
T 2h8h_A 341 EYMSKGSLLDFLKGETGK-------YLRLPQLVDMAAQIASGMAYVER 381 (535)
T ss_dssp CCCTTEEHHHHHSHHHHT-------TCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ehhcCCcHHHHHhhcCCC-------CCCHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999753211 46778888999999999999994
No 234
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=99.51 E-value=3.2e-14 Score=150.71 Aligned_cols=115 Identities=13% Similarity=0.209 Sum_probs=101.0
Q ss_pred cCCCCCCeecccCCeeEEEEEeC-CCcEEEEEEcccc---ChhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEE
Q 003737 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSK---SRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 751 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 751 (799)
++|...+.||+|+||.||++... +++.||+|.+... .....+.+.+|++++++++|+||+++++++.+.+..++||
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 94 (294)
T 2rku_A 15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL 94 (294)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEE
Confidence 45778899999999999999964 6889999998654 2334578999999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 752 EYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 752 Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
||+++|+|.+++.... .+++..+..++.|+++||+|||+
T Consensus 95 e~~~~~~L~~~~~~~~---------~~~~~~~~~i~~qi~~~l~~lH~ 133 (294)
T 2rku_A 95 ELCRRRSLLELHKRRK---------ALTEPEARYYLRQIVLGCQYLHR 133 (294)
T ss_dssp ECCTTCBHHHHHHHHC---------SCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCCCCCHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999987643 57788999999999999999994
No 235
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=99.51 E-value=1.5e-14 Score=153.64 Aligned_cols=115 Identities=22% Similarity=0.377 Sum_probs=94.4
Q ss_pred hcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccCh--------------------------hhHHHHHHHHHHHH
Q 003737 675 TNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSR--------------------------QGNREFVNEIGMIS 727 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~--------------------------~~~~~f~~E~~~l~ 727 (799)
.++|...+.||+|+||.||+|.. .+++.||||++..... ...+.+.+|++++.
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 35688889999999999999985 5789999999865421 11356899999999
Q ss_pred hCCCCcccceeEEEEE--CCEEEEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 728 AQQHPNLVKLYGCCVE--GNQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 728 ~l~H~niv~l~g~~~~--~~~~~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
+++||||+++++++.+ .+..++||||+++|+|.+++... .+++..+..++.||++||+|||+
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~----------~~~~~~~~~~~~qi~~~l~~lH~ 155 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK----------PLSEDQARFYFQDLIKGIEYLHY 155 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSS----------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcC----------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999987 56899999999999998765432 57888999999999999999994
No 236
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=99.51 E-value=3.2e-14 Score=155.43 Aligned_cols=115 Identities=17% Similarity=0.329 Sum_probs=102.4
Q ss_pred cCCCCCCeecccCCeeEEEEEeC-CCcEEEEEEcccc-ChhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEEec
Q 003737 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSK-SRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEY 753 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~~-~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 753 (799)
++|+..+.||+|+||.||++... +|+.||+|++... .....+.+.+|++++.+++||||+++++++.+++..++||||
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 112 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 112 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEEC
Confidence 56888899999999999999964 7899999999765 334457899999999999999999999999999999999999
Q ss_pred CCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 754 MKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 754 ~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
+++|+|.+++.... .+++..+..++.|++.||+|||+
T Consensus 113 ~~~~~L~~~l~~~~---------~~~~~~~~~i~~~i~~~l~~lh~ 149 (360)
T 3eqc_A 113 MDGGSLDQVLKKAG---------RIPEQILGKVSIAVIKGLTYLRE 149 (360)
T ss_dssp CTTCBHHHHHHHHS---------SCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998654 56788899999999999999994
No 237
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.51 E-value=3.9e-14 Score=148.41 Aligned_cols=116 Identities=22% Similarity=0.311 Sum_probs=101.8
Q ss_pred hcCCCCCCeecccCCeeEEEEEeC-CCcEEEEEEccccC---hhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEE
Q 003737 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS---RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLV 750 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 750 (799)
.++|...+.||+|+||.||+|... +|+.||||.+.... ....+.+.+|++++.+++||||+++++++...+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 356888899999999999999964 78999999986542 22356899999999999999999999999999999999
Q ss_pred EecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 751 YEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 751 ~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
|||+++|+|.+++.... .+++..+..++.||++||+|||+
T Consensus 90 ~e~~~~~~L~~~l~~~~---------~~~~~~~~~~~~qi~~~l~~lH~ 129 (276)
T 2h6d_A 90 MEYVSGGELFDYICKHG---------RVEEMEARRLFQQILSAVDYCHR 129 (276)
T ss_dssp EECCCSCBHHHHHHHHC---------SCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EeccCCCcHHHHHhccC---------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999997654 56788899999999999999994
No 238
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.51 E-value=2.1e-14 Score=140.15 Aligned_cols=133 Identities=23% Similarity=0.220 Sum_probs=81.9
Q ss_pred cccCCCCCCEEEccCCcCCCcCccccccc-ceeEEEccCCcCcCcCCcccCCCCCCCEEEeeCCcCCCCCCccccCCCCC
Q 003737 111 ELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINL 189 (799)
Q Consensus 111 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L 189 (799)
.+.++.+|++|++++|+++.. |...... +|++|++++|.+++. ..+..+++|++|+|++|.+++..+..|..+++|
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~i-~~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPVI-ENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EEECTTSCEEEECTTSCCCSC-CCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred hcCCcCCceEEEeeCCCCchh-HHhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 455666777777777777643 3333333 366666666666654 456667777777777777664433334666777
Q ss_pred CEEEcccCcCCccCCh--hccCCCCCCEEEccCCcCCCcCCcc----ccCCCCCCEEEccCCCCC
Q 003737 190 QKLILSSNSFTGELPA--ELTKLTNLNDLRISDNNFSGKIPEF----IGKWKKIQKLHIQGSSLE 248 (799)
Q Consensus 190 ~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~----~~~l~~L~~L~L~~N~l~ 248 (799)
++|++++|+++ .+|. .+..+++|++|++++|.++ .+|.. +..+++|+.|+++.|.+.
T Consensus 91 ~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 91 TELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 77777777664 3444 5666666777777777665 33443 566666666666666543
No 239
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=99.51 E-value=3.8e-14 Score=150.33 Aligned_cols=117 Identities=19% Similarity=0.276 Sum_probs=101.6
Q ss_pred hhcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccC---------hhhHHHHHHHHHHHHhCC-CCcccceeEEEE
Q 003737 674 ATNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKS---------RQGNREFVNEIGMISAQQ-HPNLVKLYGCCV 742 (799)
Q Consensus 674 ~t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---------~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~ 742 (799)
..++|...+.||+|+||.||+|.. .+|+.||||+++... ....+.+.+|++++.+++ ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 346788899999999999999996 478999999996542 122457889999999996 999999999999
Q ss_pred ECCEEEEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 743 EGNQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 743 ~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
..+..++||||+++|+|.+++..+. .+++..+..++.||+.||+|||+
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~l~~~~---------~~~~~~~~~~~~qi~~~l~~lH~ 142 (298)
T 1phk_A 95 TNTFFFLVFDLMKKGELFDYLTEKV---------TLSEKETRKIMRALLEVICALHK 142 (298)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHHHS---------SCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCeEEEEEeccCCCcHHHHHhccC---------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999997643 57788999999999999999994
No 240
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.51 E-value=1.2e-14 Score=163.89 Aligned_cols=116 Identities=20% Similarity=0.275 Sum_probs=93.5
Q ss_pred hcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEcccc---ChhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEE
Q 003737 675 TNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSK---SRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLV 750 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 750 (799)
.++|+..+.||+|+||.||+|.. .+|+.||||++... .......+.+|++++.+++||||+++++++.+.+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 35688889999999999999994 57899999999753 223346788999999999999999999999999999999
Q ss_pred EecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 751 YEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 751 ~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
||||++|+|.+++.... .+++..++.++.||++||+|||+
T Consensus 227 ~e~~~~~~L~~~l~~~~---------~~~~~~~~~~~~qi~~aL~~LH~ 266 (446)
T 4ejn_A 227 MEYANGGELFFHLSRER---------VFSEDRARFYGAEIVSALDYLHS 266 (446)
T ss_dssp ECCCSSCBHHHHHHHHS---------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EeeCCCCcHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999997654 57888999999999999999994
No 241
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=99.51 E-value=1.4e-14 Score=157.27 Aligned_cols=128 Identities=15% Similarity=0.233 Sum_probs=102.1
Q ss_pred HHhhcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEcccc-----ChhhHHHHHHHHHHHHhCCCCcccceeEEEEECC
Q 003737 672 KAATNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSK-----SRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGN 745 (799)
Q Consensus 672 ~~~t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~-----~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~ 745 (799)
....++|...+.||+|+||.||+|.. .+++.||+|++... .....+.+.+|++++.+++|||||++++++.+.+
T Consensus 22 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 101 (345)
T 3hko_A 22 LELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQ 101 (345)
T ss_dssp HHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred hhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCC
Confidence 44566789999999999999999995 57889999998643 2334578999999999999999999999999999
Q ss_pred EEEEEEecCCCCcHHHHHhcCcccc-------------------------------cccccCCCChHHHHHHHHHHHHHH
Q 003737 746 QLLLVYEYMKNNCLSRAIFGKLRIF-------------------------------HISIYATFPQGNIQILIISAANNI 794 (799)
Q Consensus 746 ~~~lV~Ey~~~GsL~~~L~~~~~~~-------------------------------~~~~~~~~~~~~i~~~~~qi~~gL 794 (799)
..++||||+++|+|.+++....... .......+++..+..++.||++||
T Consensus 102 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l 181 (345)
T 3hko_A 102 YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSAL 181 (345)
T ss_dssp EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHH
Confidence 9999999999999999996311100 000011235667888999999999
Q ss_pred hhhcC
Q 003737 795 DFFFF 799 (799)
Q Consensus 795 ~yLH~ 799 (799)
+|||+
T Consensus 182 ~~LH~ 186 (345)
T 3hko_A 182 HYLHN 186 (345)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99994
No 242
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.51 E-value=2.1e-14 Score=160.45 Aligned_cols=116 Identities=14% Similarity=0.265 Sum_probs=98.1
Q ss_pred hhcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccCh--------hhHHHHHHHHHHHHhCCCCcccceeEEEEEC
Q 003737 674 ATNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSR--------QGNREFVNEIGMISAQQHPNLVKLYGCCVEG 744 (799)
Q Consensus 674 ~t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~--------~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~ 744 (799)
..++|...+.||+|+||.||+|.. .+++.||||++..... .....+.+|++++.+++|||||++++++. .
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~ 211 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-A 211 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-S
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-c
Confidence 457788999999999999999985 5689999999865321 11235889999999999999999999974 5
Q ss_pred CEEEEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 745 NQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 745 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
+..++|||||++|+|.+++.... .+++..+..++.|+++||+|||+
T Consensus 212 ~~~~lv~e~~~~g~L~~~l~~~~---------~~~~~~~~~i~~qi~~~l~~LH~ 257 (419)
T 3i6u_A 212 EDYYIVLELMEGGELFDKVVGNK---------RLKEATCKLYFYQMLLAVQYLHE 257 (419)
T ss_dssp SEEEEEEECCTTCBGGGGTSSSC---------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEcCCCCcHHHHHhccC---------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 66899999999999999987654 57888999999999999999994
No 243
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=99.51 E-value=2.5e-14 Score=153.26 Aligned_cols=120 Identities=22% Similarity=0.308 Sum_probs=100.2
Q ss_pred hcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccChhhHHHHHHHHHHHHhCCCCcccceeEEEEE----CCEEEE
Q 003737 675 TNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVE----GNQLLL 749 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~----~~~~~l 749 (799)
.++|...+.||+|+||.||+++. .+|+.||||++........+.+.+|++++.+++||||+++++++.. ....++
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 107 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL 107 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence 35688889999999999999995 6789999999976666667889999999999999999999999873 347899
Q ss_pred EEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 750 VYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 750 V~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
||||+++|+|.+++...... ...+++..+..++.||++||+|||+
T Consensus 108 v~e~~~~~~L~~~l~~~~~~-----~~~~~~~~~~~i~~qi~~~L~~LH~ 152 (317)
T 2buj_A 108 LLPFFKRGTLWNEIERLKDK-----GNFLTEDQILWLLLGICRGLEAIHA 152 (317)
T ss_dssp EEECCTTCBHHHHHHHHHTT-----TCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCcHHHHHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999753211 1157888999999999999999994
No 244
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=99.51 E-value=1.6e-14 Score=151.67 Aligned_cols=117 Identities=24% Similarity=0.401 Sum_probs=100.2
Q ss_pred hhcCCCCCCeecccCCeeEEEEEeCCCcEEEEEEccccChhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEEec
Q 003737 674 ATNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEY 753 (799)
Q Consensus 674 ~t~~f~~~~~lG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 753 (799)
..++|+..+.||+|+||.||+|...++..||||.+.... ...+.+.+|++++.+++||||+++++++. .+..++||||
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~ 88 (279)
T 1qpc_A 11 PRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEY 88 (279)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEEC
T ss_pred CHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEec
Confidence 445688889999999999999998888899999997543 34578999999999999999999999986 4568999999
Q ss_pred CCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 754 MKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 754 ~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
+++|+|.+++...... .+++..+..++.|+++||+|||+
T Consensus 89 ~~~~~L~~~l~~~~~~-------~~~~~~~~~i~~qi~~~l~~lH~ 127 (279)
T 1qpc_A 89 MENGSLVDFLKTPSGI-------KLTINKLLDMAAQIAEGMAFIEE 127 (279)
T ss_dssp CTTCBHHHHTTSHHHH-------TCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHhcCCCC-------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999754311 46788889999999999999994
No 245
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=99.51 E-value=1.3e-14 Score=159.26 Aligned_cols=115 Identities=20% Similarity=0.338 Sum_probs=91.7
Q ss_pred cCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccC---hhhHHHHHHHHHH-HHhCCCCcccceeEEEEECCEEEEE
Q 003737 676 NNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKS---RQGNREFVNEIGM-ISAQQHPNLVKLYGCCVEGNQLLLV 750 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~-l~~l~H~niv~l~g~~~~~~~~~lV 750 (799)
++|+..+.||+|+||.||+++. .+++.||||+++... ....+.+.+|..+ +..++|||||++++++.+.+..|+|
T Consensus 38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv 117 (373)
T 2r5t_A 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFV 117 (373)
T ss_dssp GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEE
Confidence 4578889999999999999996 468899999997642 2234567778776 5678999999999999999999999
Q ss_pred EecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 751 YEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 751 ~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
|||+++|+|.+++...+ .+++..++.++.||+.||+|||+
T Consensus 118 ~E~~~gg~L~~~l~~~~---------~~~~~~~~~~~~qi~~aL~~LH~ 157 (373)
T 2r5t_A 118 LDYINGGELFYHLQRER---------CFLEPRARFYAAEIASALGYLHS 157 (373)
T ss_dssp EECCCSCBHHHHHHHHS---------SCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EeCCCCCcHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998654 57788999999999999999994
No 246
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=99.51 E-value=3.5e-14 Score=152.31 Aligned_cols=121 Identities=23% Similarity=0.404 Sum_probs=88.4
Q ss_pred hcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccCh-hhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEEe
Q 003737 675 TNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSR-QGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYE 752 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 752 (799)
.++|+..+.||+|+||.||+|.. .+|+.||+|+++.... ...+.+.+|++++++++|||||++++++.+++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 35688899999999999999985 5789999999975432 334688999999999999999999999999999999999
Q ss_pred cCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 753 YMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 753 y~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
|++ |+|.+++...... .....+++..++.++.||++||+|||+
T Consensus 84 ~~~-~~L~~~l~~~~~~---~~~~~~~~~~~~~~~~qi~~aL~~lH~ 126 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVG---NTPRGLELNLVKYFQWQLLQGLAFCHE 126 (317)
T ss_dssp CCC-CBHHHHHHHHHSS---SCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ecC-CCHHHHHHhcccc---ccccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 998 6999998754311 111257788999999999999999994
No 247
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=99.50 E-value=2.7e-14 Score=149.56 Aligned_cols=115 Identities=24% Similarity=0.350 Sum_probs=101.4
Q ss_pred cCCCCCCeecccCCeeEEEEEeC-CCcEEEEEEccccC-hhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEEec
Q 003737 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEY 753 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 753 (799)
++|+..+.||+|+||.||+|... +++.||||.+.... ....+.+.+|++++.+++||||+++++++.+.+..++||||
T Consensus 7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 86 (276)
T 2yex_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86 (276)
T ss_dssp HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEe
Confidence 45788899999999999999964 78999999986543 33457899999999999999999999999999999999999
Q ss_pred CCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 754 MKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 754 ~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
+++|+|.+++.... .+++..+..++.|+++||+|||+
T Consensus 87 ~~~~~L~~~l~~~~---------~~~~~~~~~~~~~i~~~l~~lH~ 123 (276)
T 2yex_A 87 CSGGELFDRIEPDI---------GMPEPDAQRFFHQLMAGVVYLHG 123 (276)
T ss_dssp CTTEEGGGGSBTTT---------BCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCcHHHHHhhcc---------CCCHHHHHHHHHHHHHHHHHHHh
Confidence 99999999987543 57788899999999999999994
No 248
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=99.50 E-value=3.9e-14 Score=150.54 Aligned_cols=115 Identities=23% Similarity=0.344 Sum_probs=96.5
Q ss_pred CCCCCCeecccCCeeEEEEEe-----CCCcEEEEEEccccC-hhhHHHHHHHHHHHHhCCCCcccceeEEEEEC--CEEE
Q 003737 677 NFDPANKVGEGGFGSVYKGIL-----SDGTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEG--NQLL 748 (799)
Q Consensus 677 ~f~~~~~lG~G~~g~Vy~~~~-----~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~ 748 (799)
.|+..+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|++++.+++||||+++++++... +..+
T Consensus 22 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 101 (302)
T 4e5w_A 22 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK 101 (302)
T ss_dssp GEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEE
T ss_pred hhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEE
Confidence 467788999999999999983 368899999997543 33457899999999999999999999999876 6689
Q ss_pred EEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 749 LVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 749 lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
+||||+++|+|.+++..... .+++..+..++.|++.||+|||+
T Consensus 102 lv~e~~~~~~L~~~l~~~~~--------~~~~~~~~~~~~~i~~~l~~lH~ 144 (302)
T 4e5w_A 102 LIMEFLPSGSLKEYLPKNKN--------KINLKQQLKYAVQICKGMDYLGS 144 (302)
T ss_dssp EEEECCTTCBHHHHHHHHTT--------TCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCcHHHHHHhccc--------cCCHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999965432 57788899999999999999994
No 249
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=99.50 E-value=3.6e-14 Score=153.49 Aligned_cols=115 Identities=13% Similarity=0.209 Sum_probs=101.0
Q ss_pred cCCCCCCeecccCCeeEEEEEeC-CCcEEEEEEcccc---ChhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEE
Q 003737 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSK---SRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 751 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 751 (799)
++|...+.||+|+||.||++... +++.||+|.+... .....+.+.+|++++.+++|+||+++++++.+.+..++||
T Consensus 41 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 120 (335)
T 2owb_A 41 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL 120 (335)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence 45777899999999999999954 6889999998654 2334578999999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 752 EYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 752 Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
||+++|+|.+++.... .+++..+..++.||++||+|||+
T Consensus 121 e~~~~~~L~~~~~~~~---------~l~~~~~~~i~~qi~~aL~~LH~ 159 (335)
T 2owb_A 121 ELCRRRSLLELHKRRK---------ALTEPEARYYLRQIVLGCQYLHR 159 (335)
T ss_dssp CCCTTCBHHHHHHHHC---------SCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCCCCCHHHHHhccC---------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999987643 57788999999999999999994
No 250
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=99.50 E-value=6.2e-14 Score=146.96 Aligned_cols=114 Identities=20% Similarity=0.375 Sum_probs=90.6
Q ss_pred cCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccC---hhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEE
Q 003737 676 NNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKS---RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 751 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 751 (799)
++|+..+.||+|+||.||+|.. .+|+.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 5788999999999999999984 578999999997542 233568999999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 752 EYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 752 Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
||+ +|+|.+++.... .+++..+..++.|+++||+|||+
T Consensus 93 e~~-~~~l~~~~~~~~---------~~~~~~~~~~~~~i~~~l~~LH~ 130 (275)
T 2eue_A 93 EYA-GNELFDYIVQRD---------KMSEQEARRFFQQIISAVEYCHR 130 (275)
T ss_dssp ECC-CEEHHHHHHTSS---------SCCHHHHHHHHHHHHHHHHHHHH
T ss_pred hhc-CCcHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 999 678988887654 57788999999999999999994
No 251
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=99.50 E-value=2.6e-14 Score=154.26 Aligned_cols=116 Identities=22% Similarity=0.397 Sum_probs=98.6
Q ss_pred hhcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccCh--hhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEE
Q 003737 674 ATNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSR--QGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLV 750 (799)
Q Consensus 674 ~t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 750 (799)
..++|...+.||+|+||.||+|.. .+++.||||+++.... ...+.+.+|++++.+++||||+++++++.+.+..++|
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 111 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLI 111 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEE
Confidence 345688899999999999999984 5789999999975532 2345788999999999999999999999999999999
Q ss_pred EecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 751 YEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 751 ~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
|||++ |+|.+++.... .+++..++.++.||++||+|||+
T Consensus 112 ~e~~~-~~L~~~~~~~~---------~~~~~~~~~i~~ql~~~l~~LH~ 150 (329)
T 3gbz_A 112 FEYAE-NDLKKYMDKNP---------DVSMRVIKSFLYQLINGVNFCHS 150 (329)
T ss_dssp EECCS-EEHHHHHHHCT---------TCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EecCC-CCHHHHHhhcC---------CCCHHHHHHHHHHHHHHHHHHHh
Confidence 99998 59999998654 57788999999999999999994
No 252
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=99.50 E-value=2.3e-14 Score=155.46 Aligned_cols=112 Identities=21% Similarity=0.393 Sum_probs=98.0
Q ss_pred hcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccChhhHHHHHHHHHHHHhC-CCCcccceeEEEEECCEEEEEEe
Q 003737 675 TNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSRQGNREFVNEIGMISAQ-QHPNLVKLYGCCVEGNQLLLVYE 752 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~E 752 (799)
.++|+..+.||+|+||.||+|.. .+|+.||||+++.... .+.+|++++.++ +|||||++++++.+.+..|+|||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E 96 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTE 96 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEe
Confidence 45688889999999999999995 4789999999975432 245788888887 79999999999999999999999
Q ss_pred cCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 753 YMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 753 y~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
|+++|+|.+++...+ .+++..+..++.||+.||+|||+
T Consensus 97 ~~~gg~L~~~i~~~~---------~~~~~~~~~~~~qi~~al~~lH~ 134 (342)
T 2qr7_A 97 LMKGGELLDKILRQK---------FFSEREASAVLFTITKTVEYLHA 134 (342)
T ss_dssp CCCSCBHHHHHHTCT---------TCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCcHHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999998654 57888999999999999999994
No 253
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=99.50 E-value=4.6e-14 Score=150.80 Aligned_cols=116 Identities=16% Similarity=0.167 Sum_probs=102.0
Q ss_pred hcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccCh---hhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEE
Q 003737 675 TNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSR---QGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLV 750 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 750 (799)
.++|...+.||+|+||.||+|.. .+++.||+|++..... ...+.+.+|++++.+++||||+++++++..++..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 36788899999999999999995 4789999999975422 2347899999999999999999999999999999999
Q ss_pred EecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 751 YEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 751 ~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
|||+++|+|.+++.... .+++..+..++.|+++||+|||+
T Consensus 113 ~e~~~~~~L~~~l~~~~---------~~~~~~~~~i~~qi~~~l~~lH~ 152 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQG---------PLAPPRAVAIVRQIGSALDAAHA 152 (309)
T ss_dssp EECCCCEEHHHHHHHHC---------SCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecCCCCHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998653 57788899999999999999994
No 254
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=99.50 E-value=3.4e-14 Score=149.71 Aligned_cols=115 Identities=20% Similarity=0.382 Sum_probs=100.8
Q ss_pred cCCCCCCeecccCCeeEEEEEeC-CCcEEEEEEccccC---hhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEE
Q 003737 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS---RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 751 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 751 (799)
++|...+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++.+++||||+++++++.+.+..++||
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 93 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML 93 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46788899999999999999954 67899999986532 223467999999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 752 EYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 752 Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
||+++|+|.+++.... .+++..+..++.|+++||+|||+
T Consensus 94 e~~~~~~L~~~l~~~~---------~~~~~~~~~~~~qi~~~l~~lH~ 132 (284)
T 2vgo_A 94 EFAPRGELYKELQKHG---------RFDEQRSATFMEELADALHYCHE 132 (284)
T ss_dssp CCCTTEEHHHHHHHHS---------SCCHHHHHHHHHHHHHHHHHHHT
T ss_pred EeCCCCcHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999997654 57788999999999999999995
No 255
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=99.50 E-value=6.3e-14 Score=148.10 Aligned_cols=113 Identities=21% Similarity=0.352 Sum_probs=97.1
Q ss_pred CCCCCeecccCCeeEEEEEe-CCCcEEEEEEcccc--ChhhHHHHHHHHHHHHhCCCCcccceeEEEEE----CCEEEEE
Q 003737 678 FDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSK--SRQGNREFVNEIGMISAQQHPNLVKLYGCCVE----GNQLLLV 750 (799)
Q Consensus 678 f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~----~~~~~lV 750 (799)
|...+.||+|+||.||+|.. .++..||+|.+... .....+.+.+|++++.+++||||+++++++.. ....++|
T Consensus 28 ~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv 107 (290)
T 1t4h_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 107 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred EEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEE
Confidence 55567899999999999985 56889999998654 33446789999999999999999999999875 3568999
Q ss_pred EecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 751 YEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 751 ~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
|||+++|+|.+++.... .+++..+..++.||++||+|||+
T Consensus 108 ~e~~~~~~L~~~l~~~~---------~~~~~~~~~~~~qi~~~l~~lH~ 147 (290)
T 1t4h_A 108 TELMTSGTLKTYLKRFK---------VMKIKVLRSWCRQILKGLQFLHT 147 (290)
T ss_dssp EECCCSCBHHHHHHHHS---------SCCHHHHHHHHHHHHHHHHHHHT
T ss_pred EEecCCCCHHHHHHHcc---------CCCHHHHHHHHHHHHHHHHHHHc
Confidence 99999999999997643 56788899999999999999995
No 256
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.50 E-value=2.7e-14 Score=162.79 Aligned_cols=115 Identities=19% Similarity=0.333 Sum_probs=102.0
Q ss_pred cCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEcccc--ChhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEEe
Q 003737 676 NNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSK--SRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYE 752 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 752 (799)
++|...+.||+|+||.||+|.. .+++.||||++... .....+.+.+|++++.+++|||||++++++.+.+..++|||
T Consensus 22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 101 (486)
T 3mwu_A 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE 101 (486)
T ss_dssp HHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred cceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEE
Confidence 4588889999999999999995 47899999998643 23345789999999999999999999999999999999999
Q ss_pred cCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 753 YMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 753 y~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
|+++|+|.+++.... .+++..+..++.||+.||+|||+
T Consensus 102 ~~~~~~L~~~~~~~~---------~~~~~~~~~i~~qi~~al~~lH~ 139 (486)
T 3mwu_A 102 LYTGGELFDEIIKRK---------RFSEHDAARIIKQVFSGITYMHK 139 (486)
T ss_dssp CCCSCBHHHHHHHHS---------SCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCcHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999987654 57888999999999999999994
No 257
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.50 E-value=2.6e-14 Score=163.28 Aligned_cols=115 Identities=21% Similarity=0.381 Sum_probs=97.5
Q ss_pred cCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccC--hhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEEe
Q 003737 676 NNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYE 752 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 752 (799)
+.|+..+.||+|+||.||+|.. .++..||||++.... ....+.+.+|++++.+++|||||+++++|.+.+..++|||
T Consensus 37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 116 (494)
T 3lij_A 37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVME 116 (494)
T ss_dssp HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence 4577889999999999999995 478999999997542 2345789999999999999999999999999999999999
Q ss_pred cCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 753 YMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 753 y~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
|+++|+|.+++..+. .+++..+..++.||++||+|||+
T Consensus 117 ~~~~g~L~~~~~~~~---------~~~~~~~~~i~~qi~~~l~~lH~ 154 (494)
T 3lij_A 117 CYKGGELFDEIIHRM---------KFNEVDAAVIIKQVLSGVTYLHK 154 (494)
T ss_dssp CCCSCBHHHHHHHHS---------SCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCcHHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999987654 57788999999999999999994
No 258
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=99.50 E-value=2.5e-14 Score=153.01 Aligned_cols=115 Identities=23% Similarity=0.302 Sum_probs=96.9
Q ss_pred cCCCCCCeecccCCeeEEEEEeC-CCcEEEEEEcccc--ChhhHHHHHHHHHHHHhC-CCCcccceeEEEEECCEEEEEE
Q 003737 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSK--SRQGNREFVNEIGMISAQ-QHPNLVKLYGCCVEGNQLLLVY 751 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~ 751 (799)
++|+..+.||+|+||+||+|... +|+.||||++... .......+.+|+..+.++ +|||||+++++|.+++..++||
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 56888999999999999999965 7999999998654 233345667777766665 8999999999999999999999
Q ss_pred ecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 752 EYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 752 Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
||+ +|+|.+++..... .+++..+..++.||+.||+|||+
T Consensus 137 e~~-~~~L~~~~~~~~~--------~l~~~~~~~i~~qi~~aL~~LH~ 175 (311)
T 3p1a_A 137 ELC-GPSLQQHCEAWGA--------SLPEAQVWGYLRDTLLALAHLHS 175 (311)
T ss_dssp ECC-CCBHHHHHHHHCS--------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ecc-CCCHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 999 6799999876532 57888999999999999999994
No 259
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=99.50 E-value=3.1e-14 Score=157.82 Aligned_cols=118 Identities=17% Similarity=0.280 Sum_probs=100.7
Q ss_pred cCCCCCCeecccCCeeEEEEEeC-CCcEEEEEEccccC-hhhHHHHHHHHHHHHhCCCCcccceeEEEEECC--EEEEEE
Q 003737 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGN--QLLLVY 751 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~--~~~lV~ 751 (799)
+.|...+.||+|+||.||+|... +|+.||||++.... ....+.+.+|++++.+++|||||++++++...+ ..++||
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~ 88 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence 45778899999999999999964 68999999997543 234577899999999999999999999998765 789999
Q ss_pred ecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 752 EYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 752 Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
||+++|+|.+++...... ..+++..+..++.||+.||+|||+
T Consensus 89 e~~~~g~L~~~l~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH~ 130 (396)
T 4eut_A 89 EFCPCGSLYTVLEEPSNA------YGLPESEFLIVLRDVVGGMNHLRE 130 (396)
T ss_dssp CCCTTEEHHHHTTSGGGT------TCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCCCCCHHHHHHhhhcc------cCCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999865421 137888999999999999999994
No 260
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.50 E-value=3.7e-14 Score=161.55 Aligned_cols=115 Identities=22% Similarity=0.371 Sum_probs=102.2
Q ss_pred cCCCCCCeecccCCeeEEEEEeC-CCcEEEEEEccccC---hhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEE
Q 003737 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS---RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 751 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 751 (799)
++|...+.||+|+||.||+|... +|+.||||++.... ....+.+.+|++++.+++|||||++++++.+.+..++||
T Consensus 26 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 105 (484)
T 3nyv_A 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVG 105 (484)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 45778899999999999999954 78999999986542 334678999999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 752 EYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 752 Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
||+++|+|.+++..+. .+++..+..++.||+.||+|||+
T Consensus 106 e~~~~~~L~~~~~~~~---------~~~~~~~~~i~~qi~~~l~~lH~ 144 (484)
T 3nyv_A 106 EVYTGGELFDEIISRK---------RFSEVDAARIIRQVLSGITYMHK 144 (484)
T ss_dssp CCCCSCBHHHHHHTCS---------CCBHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCCCCCHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998654 57788999999999999999994
No 261
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=99.49 E-value=2.2e-14 Score=153.25 Aligned_cols=126 Identities=21% Similarity=0.318 Sum_probs=103.3
Q ss_pred hhcCCCCCCeecccCCeeEEEEEe------CCCcEEEEEEccccCh-hhHHHHHHHHHHHHhC-CCCcccceeEEEEECC
Q 003737 674 ATNNFDPANKVGEGGFGSVYKGIL------SDGTVIAVKQLSSKSR-QGNREFVNEIGMISAQ-QHPNLVKLYGCCVEGN 745 (799)
Q Consensus 674 ~t~~f~~~~~lG~G~~g~Vy~~~~------~~g~~vAvK~l~~~~~-~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~ 745 (799)
..++|...+.||+|+||.||+|.. .+++.||||+++.... ...+.+.+|++++.++ +||||+++++++.+.+
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 100 (313)
T 1t46_A 21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG 100 (313)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred ChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC
Confidence 446688889999999999999984 3568999999976533 3457899999999999 9999999999999999
Q ss_pred EEEEEEecCCCCcHHHHHhcCccccc---------ccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 746 QLLLVYEYMKNNCLSRAIFGKLRIFH---------ISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 746 ~~~lV~Ey~~~GsL~~~L~~~~~~~~---------~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
..++||||+++|+|.+++........ ......+++..+..++.||++||+|||+
T Consensus 101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~ 163 (313)
T 1t46_A 101 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS 163 (313)
T ss_dssp SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999986542100 0111247888999999999999999994
No 262
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=99.49 E-value=3.7e-14 Score=156.41 Aligned_cols=125 Identities=19% Similarity=0.320 Sum_probs=102.4
Q ss_pred hcCCCCCCeecccCCeeEEEEEeC--------CCcEEEEEEccccC-hhhHHHHHHHHHHHHhC-CCCcccceeEEEEEC
Q 003737 675 TNNFDPANKVGEGGFGSVYKGILS--------DGTVIAVKQLSSKS-RQGNREFVNEIGMISAQ-QHPNLVKLYGCCVEG 744 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~~~--------~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~ 744 (799)
.++|...+.||+|+||.||+|+.. ++..||||+++... ....+.+.+|++++.++ +|||||++++++.++
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 456778899999999999999842 34689999997653 34457899999999999 999999999999999
Q ss_pred CEEEEEEecCCCCcHHHHHhcCcccc-------cccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 745 NQLLLVYEYMKNNCLSRAIFGKLRIF-------HISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 745 ~~~~lV~Ey~~~GsL~~~L~~~~~~~-------~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
+..++||||+++|+|.+++....... .......+++..+..++.||++||+|||+
T Consensus 148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~ 209 (382)
T 3tt0_A 148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS 209 (382)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999998654210 00111257888999999999999999994
No 263
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=99.49 E-value=4.5e-14 Score=152.63 Aligned_cols=125 Identities=18% Similarity=0.325 Sum_probs=100.7
Q ss_pred hcCCCCCCeecccCCeeEEEEEe--------CCCcEEEEEEccccC-hhhHHHHHHHHHHHHhC-CCCcccceeEEEEEC
Q 003737 675 TNNFDPANKVGEGGFGSVYKGIL--------SDGTVIAVKQLSSKS-RQGNREFVNEIGMISAQ-QHPNLVKLYGCCVEG 744 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~~--------~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~ 744 (799)
.++|...+.||+|+||.||+|.. .++..||||+++... ....+.+.+|++++.++ +||||+++++++.+.
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 45678889999999999999985 246789999997653 34457899999999999 899999999999999
Q ss_pred CEEEEEEecCCCCcHHHHHhcCcccccc-------cccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 745 NQLLLVYEYMKNNCLSRAIFGKLRIFHI-------SIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 745 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~~-------~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
+..++||||+++|+|.+++......... .....+++..+..++.||++||+|||+
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~ 175 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS 175 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999865421000 001247788899999999999999994
No 264
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=99.49 E-value=3.8e-14 Score=154.17 Aligned_cols=115 Identities=21% Similarity=0.413 Sum_probs=98.4
Q ss_pred cCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccCh---hhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEE
Q 003737 676 NNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSR---QGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 751 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 751 (799)
+.|...+.||+|+||.||+|.. .+|+.||||++..... ...+.+.+|++++.+++|||||++++++.+.+..++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 3477788999999999999994 6789999999965422 23467999999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 752 EYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 752 Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
||++ |+|.+++..... .+++..+..++.|+++||+|||+
T Consensus 134 e~~~-g~l~~~l~~~~~--------~l~~~~~~~i~~qi~~aL~~LH~ 172 (348)
T 1u5q_A 134 EYCL-GSASDLLEVHKK--------PLQEVEIAAVTHGALQGLAYLHS 172 (348)
T ss_dssp ECCS-EEHHHHHHHHTS--------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCC-CCHHHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHh
Confidence 9998 689888864322 57788899999999999999994
No 265
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=99.49 E-value=8.4e-14 Score=148.14 Aligned_cols=114 Identities=22% Similarity=0.437 Sum_probs=101.0
Q ss_pred cCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccC-hhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEEec
Q 003737 676 NNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEY 753 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 753 (799)
+.|...+.||+|+||.||+|.. .+++.||||.+.... ....+.+.+|++++.+++||||+++++++.+.+..++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 101 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY 101 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEe
Confidence 4577889999999999999985 578999999996543 33467899999999999999999999999999999999999
Q ss_pred CCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 754 MKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 754 ~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
+++|+|.+++... .+++..+..++.|++.||+|||+
T Consensus 102 ~~~~~L~~~~~~~----------~~~~~~~~~~~~qi~~~l~~lH~ 137 (303)
T 3a7i_A 102 LGGGSALDLLEPG----------PLDETQIATILREILKGLDYLHS 137 (303)
T ss_dssp CTTEEHHHHHTTS----------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998753 46788899999999999999994
No 266
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=99.49 E-value=5.8e-14 Score=148.08 Aligned_cols=115 Identities=30% Similarity=0.474 Sum_probs=97.3
Q ss_pred hcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccChhh-------HHHHHHHHHHHHhCCCCcccceeEEEEECCE
Q 003737 675 TNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSRQG-------NREFVNEIGMISAQQHPNLVKLYGCCVEGNQ 746 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~-------~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~ 746 (799)
.++|+..+.||+|+||.||+|.. .+++.||||++....... .+.+.+|++++.+++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 35677889999999999999995 578999999996542211 168999999999999999999999986554
Q ss_pred EEEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 747 LLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 747 ~~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
++||||+++|+|.+++..+.. .+++..+..++.|+++||+|||+
T Consensus 97 -~lv~e~~~~~~L~~~l~~~~~--------~~~~~~~~~~~~~l~~~l~~lH~ 140 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLDKAH--------PIKWSVKLRLMLDIALGIEYMQN 140 (287)
T ss_dssp -EEEEECCTTCBHHHHHHCTTS--------CCCHHHHHHHHHHHHHHHHHHHT
T ss_pred -eEEEEecCCCCHHHHHhcccC--------CccHHHHHHHHHHHHHHHHHHHh
Confidence 699999999999999876542 57788889999999999999995
No 267
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=99.49 E-value=1.1e-13 Score=148.48 Aligned_cols=112 Identities=22% Similarity=0.425 Sum_probs=97.1
Q ss_pred CCCCCeecccCCeeEEEEEeC-----CCcEEEEEEccccC-hhhHHHHHHHHHHHHhCCCCcccceeEEEEEC--CEEEE
Q 003737 678 FDPANKVGEGGFGSVYKGILS-----DGTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEG--NQLLL 749 (799)
Q Consensus 678 f~~~~~lG~G~~g~Vy~~~~~-----~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~--~~~~l 749 (799)
|...+.||+|+||.||++.+. +++.||||++.... ....+.+.+|++++.+++||||+++++++.+. ...++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 367789999999999998642 68899999997653 34467899999999999999999999999884 67899
Q ss_pred EEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 750 VYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 750 V~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
||||+++|+|.+++... .+++..+..++.|++.||+|||+
T Consensus 113 v~e~~~~~~L~~~l~~~----------~~~~~~~~~i~~~l~~~l~~LH~ 152 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRH----------SIGLAQLLLFAQQICEGMAYLHA 152 (318)
T ss_dssp EECCCTTCBHHHHGGGS----------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecccCCcHHHHHhhC----------CCCHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999754 36778899999999999999994
No 268
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=99.49 E-value=3.1e-14 Score=155.90 Aligned_cols=119 Identities=18% Similarity=0.185 Sum_probs=99.5
Q ss_pred hhcCCCCCCeecccCCeeEEEEE------eCCCcEEEEEEccccChhhHHHHHHHHHHHHhCC---CCcccceeEEEEEC
Q 003737 674 ATNNFDPANKVGEGGFGSVYKGI------LSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQ---HPNLVKLYGCCVEG 744 (799)
Q Consensus 674 ~t~~f~~~~~lG~G~~g~Vy~~~------~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~---H~niv~l~g~~~~~ 744 (799)
..++|...+.||+|+||.||+|. ..+++.||||+++.. ...++.+|++++.+++ |+||+++++++...
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~ 139 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ 139 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECS
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecC
Confidence 44668888999999999999994 456889999999754 3457888888888887 99999999999999
Q ss_pred CEEEEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 745 NQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 745 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
+..++|||||++|+|.++++....... ..+++..+..++.||++||+|||+
T Consensus 140 ~~~~lv~e~~~~g~L~~~l~~~~~~~~----~~l~~~~~~~i~~qi~~~L~~lH~ 190 (365)
T 3e7e_A 140 NGSVLVGELYSYGTLLNAINLYKNTPE----KVMPQGLVISFAMRMLYMIEQVHD 190 (365)
T ss_dssp SCEEEEECCCCSCBHHHHHHHHHTSTT----CSCCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCcEEEEeccCCCcHHHHHHHhhcccc----cCCCHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999975321111 168888999999999999999996
No 269
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.49 E-value=3.3e-14 Score=153.39 Aligned_cols=236 Identities=12% Similarity=0.053 Sum_probs=126.2
Q ss_pred ccEEEEEeCCCCCcccCCccccC-CCCCCEEEccCCcCC--CcCcccccccceeEEEccCCcCcCcCCcccCC-------
Q 003737 92 CHVVTIALKAQNLTGTLPTELSK-LRYLKQLDLSRNCLT--GSFSPQWASLQLVELSVMGNRLSGPFPKVLTN------- 161 (799)
Q Consensus 92 ~~v~~L~L~~~~l~g~~p~~~~~-l~~L~~L~Ls~N~l~--~~~p~~~~~l~L~~L~Ls~N~l~~~~p~~~~~------- 161 (799)
.+++.|.++++ +.+.--..+.. +++|++|||++|++. ...+..+.. ++.+.+..|.+ .+..|.+
T Consensus 25 ~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~~~~--~~~~~~~~~~I---~~~aF~~~~~~~~~ 98 (329)
T 3sb4_A 25 NSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGTYPN--GKFYIYMANFV---PAYAFSNVVNGVTK 98 (329)
T ss_dssp HHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSSSGG--GCCEEECTTEE---CTTTTEEEETTEEE
T ss_pred CceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCccccccc--ccccccccccc---CHHHhccccccccc
Confidence 35777777643 11111122333 788999999999988 222222222 33444444422 2334555
Q ss_pred -CCCCCEEEeeCCcCCCCCCccccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccCCcC----CCcCCcccc----
Q 003737 162 -ITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNF----SGKIPEFIG---- 232 (799)
Q Consensus 162 -L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l----~~~~p~~~~---- 232 (799)
+++|+.|+|.+ .++..-+..|.++++|+.|++++|.++...+..|.++.++..+.+..+.. ...-...|.
T Consensus 99 g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~ 177 (329)
T 3sb4_A 99 GKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEP 177 (329)
T ss_dssp ECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCC
T ss_pred ccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccc
Confidence 88888888887 67655556688888888888888887766666777766666666554221 100111111
Q ss_pred ----------------------------------------------CCCCCCEEEccCCCCCCCCchhhhcCCCCCeEEc
Q 003737 233 ----------------------------------------------KWKKIQKLHIQGSSLEGPIPASISALTSLTDLRI 266 (799)
Q Consensus 233 ----------------------------------------------~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 266 (799)
.+++|+.|+|++|+++...+..|.++++|+.|++
T Consensus 178 L~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l 257 (329)
T 3sb4_A 178 LETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKL 257 (329)
T ss_dssp CEEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEEC
T ss_pred cceeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEEC
Confidence 1445555555555555444445555555555555
Q ss_pred CCCCCCCCCCCccCC-CCcc-EEEccCCcCcccCCccccCCCCCCeeccccccCCCCCchhhhccCCCCEEe
Q 003737 267 SDLKGSESAFPKLDK-MNLK-TLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMY 336 (799)
Q Consensus 267 ~~n~~~~~~~~~l~~-~~L~-~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 336 (799)
.+| .....-..|.. .+|+ .+++.+ .++...+..|.++++|+.++++.|+++...+.+|.++++|+.++
T Consensus 258 ~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 258 PHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp CTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred Ccc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 542 22211112333 3455 555554 44444444555555555555555555544444555555555554
No 270
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=99.49 E-value=4.8e-14 Score=161.58 Aligned_cols=119 Identities=19% Similarity=0.272 Sum_probs=102.4
Q ss_pred cCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccC---hhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEE
Q 003737 676 NNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKS---RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 751 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 751 (799)
++|...+.||+|+||.||+|.. .+|+.||+|++.... ....+.+.+|++++.+++|||||++++++.+.+..|+||
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 264 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM 264 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence 5678889999999999999996 479999999996542 223467899999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 752 EYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 752 Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
||+++|+|.+++...... ...+++..+..|+.||+.||+|||+
T Consensus 265 E~~~gg~L~~~l~~~~~~-----~~~l~e~~~~~~~~qi~~aL~~LH~ 307 (543)
T 3c4z_A 265 TIMNGGDIRYHIYNVDED-----NPGFQEPRAIFYTAQIVSGLEHLHQ 307 (543)
T ss_dssp CCCTTCBHHHHHHTSSTT-----SCSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EeccCCCHHHHHHHhhcc-----cccccHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999764311 1157888999999999999999994
No 271
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=99.49 E-value=9.4e-14 Score=148.26 Aligned_cols=119 Identities=24% Similarity=0.430 Sum_probs=99.8
Q ss_pred cCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEcccc---ChhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEE
Q 003737 676 NNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSK---SRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 751 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 751 (799)
++|...+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|++++.+++||||+++++++...+..++||
T Consensus 32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 111 (310)
T 2wqm_A 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 111 (310)
T ss_dssp GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEE
Confidence 4578889999999999999995 57899999999753 2334578999999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 752 EYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 752 Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
||+++|+|.+++...... ...+++..+..++.||++||+|||+
T Consensus 112 e~~~~~~L~~~l~~~~~~-----~~~~~~~~~~~i~~qi~~~l~~LH~ 154 (310)
T 2wqm_A 112 ELADAGDLSRMIKHFKKQ-----KRLIPERTVWKYFVQLCSALEHMHS 154 (310)
T ss_dssp ECCCSCBHHHHHHHHHHT-----TCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCCCCCHHHHHHHhccc-----ccCCCHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999742210 1157788899999999999999994
No 272
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=99.49 E-value=4.8e-14 Score=154.01 Aligned_cols=127 Identities=20% Similarity=0.237 Sum_probs=108.4
Q ss_pred ccccHHHHHHhhcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccChhhHHHHHHHHHHHHhCC-----CCcccce
Q 003737 664 GLYTLRQIKAATNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQ-----HPNLVKL 737 (799)
Q Consensus 664 ~~~~~~~~~~~t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-----H~niv~l 737 (799)
..+++.+.....++|...+.||+|+||.||+|.. .+++.||||+++.. ....+.+.+|++++.+++ |||||++
T Consensus 23 ~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~ 101 (360)
T 3llt_A 23 VHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKY 101 (360)
T ss_dssp GSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCE
T ss_pred eeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecc
Confidence 3455556566778899999999999999999995 57899999999643 334567888999999987 9999999
Q ss_pred eEEEEECCEEEEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 738 YGCCVEGNQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 738 ~g~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
++++...+..++||||+ +|+|.+++...... .+++..+..++.||+.||+|||+
T Consensus 102 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~-------~~~~~~~~~i~~qi~~aL~~LH~ 155 (360)
T 3llt_A 102 HGKFMYYDHMCLIFEPL-GPSLYEIITRNNYN-------GFHIEDIKLYCIEILKALNYLRK 155 (360)
T ss_dssp EEEEEETTEEEEEECCC-CCBHHHHHHHTTTC-------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cceeeECCeeEEEEcCC-CCCHHHHHHhcCCC-------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999 89999999865422 47788999999999999999994
No 273
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.49 E-value=9.4e-14 Score=146.58 Aligned_cols=114 Identities=25% Similarity=0.469 Sum_probs=96.7
Q ss_pred CCCCCC-eecccCCeeEEEEEeC---CCcEEEEEEccccC-hhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEE
Q 003737 677 NFDPAN-KVGEGGFGSVYKGILS---DGTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 751 (799)
Q Consensus 677 ~f~~~~-~lG~G~~g~Vy~~~~~---~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 751 (799)
+|...+ .||+|+||.||+|... ++..||||+++... ....+.+.+|++++.+++||||+++++++ ..+..++||
T Consensus 10 ~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~ 88 (287)
T 1u59_A 10 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVM 88 (287)
T ss_dssp GEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEE
T ss_pred HhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEE
Confidence 344444 8999999999999853 67889999997653 34567899999999999999999999999 566789999
Q ss_pred ecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 752 EYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 752 Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
||+++|+|.+++..... .+++..+..++.|+++||+|||+
T Consensus 89 e~~~~~~L~~~l~~~~~--------~~~~~~~~~~~~qi~~~l~~lH~ 128 (287)
T 1u59_A 89 EMAGGGPLHKFLVGKRE--------EIPVSNVAELLHQVSMGMKYLEE 128 (287)
T ss_dssp ECCTTEEHHHHHTTCTT--------TSCHHHHHHHHHHHHHHHHHHHH
T ss_pred EeCCCCCHHHHHHhCCc--------cCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999975432 57788999999999999999994
No 274
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=99.48 E-value=2.9e-14 Score=154.63 Aligned_cols=127 Identities=22% Similarity=0.380 Sum_probs=100.9
Q ss_pred HhhcCCCCCCeecccCCeeEEEEEe------CCCcEEEEEEccccC-hhhHHHHHHHHHHHHhC-CCCcccceeEEEEEC
Q 003737 673 AATNNFDPANKVGEGGFGSVYKGIL------SDGTVIAVKQLSSKS-RQGNREFVNEIGMISAQ-QHPNLVKLYGCCVEG 744 (799)
Q Consensus 673 ~~t~~f~~~~~lG~G~~g~Vy~~~~------~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~ 744 (799)
...++|...+.||+|+||.||+|.. .++..||||++.... ....+.+.+|++++.++ +||||+++++++...
T Consensus 42 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 121 (344)
T 1rjb_A 42 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLS 121 (344)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred cCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeC
Confidence 3456788899999999999999985 245689999997542 33457899999999999 899999999999999
Q ss_pred CEEEEEEecCCCCcHHHHHhcCcccccc--------------cccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 745 NQLLLVYEYMKNNCLSRAIFGKLRIFHI--------------SIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 745 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~~--------------~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
+..++||||+++|+|.+++......... .....+++..+..++.||++||+|||+
T Consensus 122 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~ 190 (344)
T 1rjb_A 122 GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF 190 (344)
T ss_dssp SSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHH
T ss_pred CccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999865432110 001246788899999999999999994
No 275
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=99.48 E-value=3.1e-14 Score=153.02 Aligned_cols=124 Identities=20% Similarity=0.361 Sum_probs=94.3
Q ss_pred HhhcCCCCCCeecccCCeeEEEEEeC-CC---cEEEEEEcccc--ChhhHHHHHHHHHHHHhCCCCcccceeEEEEECCE
Q 003737 673 AATNNFDPANKVGEGGFGSVYKGILS-DG---TVIAVKQLSSK--SRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQ 746 (799)
Q Consensus 673 ~~t~~f~~~~~lG~G~~g~Vy~~~~~-~g---~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~ 746 (799)
...++|+..+.||+|+||.||+|... ++ ..||||+++.. .....+.|.+|++++.+++||||+++++++...+.
T Consensus 20 i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 99 (323)
T 3qup_A 20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRA 99 (323)
T ss_dssp CC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC--
T ss_pred cChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccc
Confidence 34567888999999999999999854 33 27999999764 33456789999999999999999999999987765
Q ss_pred E------EEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 747 L------LLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 747 ~------~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
. ++||||+++|+|.+++...... .....+++..+..++.||++||+|||+
T Consensus 100 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~---~~~~~~~~~~~~~i~~qi~~al~~LH~ 155 (323)
T 3qup_A 100 KGRLPIPMVILPFMKHGDLHAFLLASRIG---ENPFNLPLQTLVRFMVDIACGMEYLSS 155 (323)
T ss_dssp -----CEEEEEECCTTCBHHHHHHHHHC------CCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCccEEEEEeccCCcHHHHHHhhhcc---ccccccCHHHHHHHHHHHHHHHHHHHc
Confidence 5 9999999999999999754311 111257888999999999999999994
No 276
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.48 E-value=7.7e-14 Score=150.24 Aligned_cols=116 Identities=24% Similarity=0.403 Sum_probs=99.5
Q ss_pred cCCCCCCeecccCCeeEEEEEe-----CCCcEEEEEEccccChhhHHHHHHHHHHHHhCCCCcccceeEEEEECC--EEE
Q 003737 676 NNFDPANKVGEGGFGSVYKGIL-----SDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGN--QLL 748 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~-----~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~--~~~ 748 (799)
++|...+.||+|+||.||++.. .+|+.||||++........+.+.+|++++.+++||||+++++++...+ ..+
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 120 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 120 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCE
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceE
Confidence 3467788999999999999984 368899999998766666788999999999999999999999987644 689
Q ss_pred EEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 749 LVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 749 lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
+||||+++|+|.+++..... .+++..+..++.||++||+|||+
T Consensus 121 lv~e~~~~~~L~~~l~~~~~--------~~~~~~~~~i~~qi~~aL~~LH~ 163 (326)
T 2w1i_A 121 LIMEYLPYGSLRDYLQKHKE--------RIDHIKLLQYTSQICKGMEYLGT 163 (326)
T ss_dssp EEECCCTTCBHHHHHHHSTT--------SSCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHhccc--------CCCHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999986532 46788888899999999999994
No 277
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.48 E-value=8.8e-14 Score=152.37 Aligned_cols=120 Identities=18% Similarity=0.314 Sum_probs=103.2
Q ss_pred HHHhhcCCCCCCeecccCCeeEEEEEeC-CCcEEEEEEccccCh--------hhHHHHHHHHHHHHhC-CCCcccceeEE
Q 003737 671 IKAATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSR--------QGNREFVNEIGMISAQ-QHPNLVKLYGC 740 (799)
Q Consensus 671 ~~~~t~~f~~~~~lG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~--------~~~~~f~~E~~~l~~l-~H~niv~l~g~ 740 (799)
.....++|+..+.||+|+||.||+|... +|+.||||+++.... ...+.+.+|++++.++ +||||++++++
T Consensus 89 ~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~ 168 (365)
T 2y7j_A 89 AKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDS 168 (365)
T ss_dssp HHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEE
T ss_pred hhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEE
Confidence 3445567888999999999999999964 799999999865431 1135688999999999 79999999999
Q ss_pred EEECCEEEEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 741 CVEGNQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 741 ~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
+...+..++||||+++|+|.+++.... .+++..+..++.||+.||+|||+
T Consensus 169 ~~~~~~~~lv~e~~~g~~L~~~l~~~~---------~l~~~~~~~i~~qi~~~L~~LH~ 218 (365)
T 2y7j_A 169 YESSSFMFLVFDLMRKGELFDYLTEKV---------ALSEKETRSIMRSLLEAVSFLHA 218 (365)
T ss_dssp EEBSSEEEEEECCCTTCBHHHHHHHHS---------SCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EeeCCEEEEEEEeCCCCcHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999997543 57788999999999999999994
No 278
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=99.48 E-value=7.2e-14 Score=147.02 Aligned_cols=116 Identities=18% Similarity=0.303 Sum_probs=98.0
Q ss_pred hcCCCCCCeecccCCeeEEEEEeC----CCcEEEEEEccccC-hhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEE
Q 003737 675 TNNFDPANKVGEGGFGSVYKGILS----DGTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLL 749 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~~~----~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 749 (799)
.++|+..+.||+|+||.||+|... .+..||+|.+.... ....+.|.+|++++.+++||||+++++++ .++..++
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-~~~~~~l 92 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWI 92 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-CSSSCEE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEE-ccCccEE
Confidence 456778899999999999999853 25679999987643 33457899999999999999999999998 4567899
Q ss_pred EEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 750 VYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 750 V~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
||||+++|+|.+++..+.. .+++..+..++.|+++||+|||+
T Consensus 93 v~e~~~~~~L~~~l~~~~~--------~~~~~~~~~~~~qi~~~l~~lH~ 134 (281)
T 1mp8_A 93 IMELCTLGELRSFLQVRKY--------SLDLASLILYAYQLSTALAYLES 134 (281)
T ss_dssp EEECCTTEEHHHHHHHTTT--------TSCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecCCCCCHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999975532 47788899999999999999994
No 279
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.48 E-value=6.8e-14 Score=163.70 Aligned_cols=108 Identities=25% Similarity=0.472 Sum_probs=93.9
Q ss_pred eecccCCeeEEEEEeC---CCcEEEEEEccccC-hhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEEecCCCCc
Q 003737 683 KVGEGGFGSVYKGILS---DGTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYMKNNC 758 (799)
Q Consensus 683 ~lG~G~~g~Vy~~~~~---~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~Gs 758 (799)
.||+|+||.||+|... ++..||||+++... ....++|.+|+++|.+++|||||+++++|.+ +..++|||||++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 7999999999999853 46689999997653 3356789999999999999999999999976 56899999999999
Q ss_pred HHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 759 LSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 759 L~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
|.++++.... .+++..+..++.||++||+|||+
T Consensus 422 L~~~l~~~~~--------~l~~~~~~~i~~qi~~~L~~LH~ 454 (613)
T 2ozo_A 422 LHKFLVGKRE--------EIPVSNVAELLHQVSMGMKYLEE 454 (613)
T ss_dssp HHHHHTTCTT--------TSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhccC--------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999976532 57788899999999999999994
No 280
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=99.48 E-value=6.6e-14 Score=153.01 Aligned_cols=124 Identities=20% Similarity=0.333 Sum_probs=105.1
Q ss_pred cHHHHHHhhcCCCCCCeecccCCeeEEEEEeCCCcEEEEEEccccCh-----------hhHHHHHHHHHHHHhCCCCccc
Q 003737 667 TLRQIKAATNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSR-----------QGNREFVNEIGMISAQQHPNLV 735 (799)
Q Consensus 667 ~~~~~~~~t~~f~~~~~lG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~-----------~~~~~f~~E~~~l~~l~H~niv 735 (799)
...++....++|...+.||+|+||.||+|...+|+.||||++..... ...+.+.+|++++.+++||||+
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 45677788899999999999999999999987899999999854321 1237899999999999999999
Q ss_pred ceeEEEEEC-----CEEEEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 736 KLYGCCVEG-----NQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 736 ~l~g~~~~~-----~~~~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
++++++... ...++||||++ |+|.+++..... .+++..+..++.||+.||+|||+
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~--------~~~~~~~~~~~~qi~~~l~~lH~ 152 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRI--------VISPQHIQYFMYHILLGLHVLHE 152 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTS--------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhccc--------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 999998653 36899999998 699998875432 57788999999999999999994
No 281
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.48 E-value=6.5e-14 Score=147.81 Aligned_cols=117 Identities=20% Similarity=0.333 Sum_probs=102.8
Q ss_pred hhcCCCCCCeecccCCeeEEEEEeC-CCcEEEEEEccccC--hhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEE
Q 003737 674 ATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLV 750 (799)
Q Consensus 674 ~t~~f~~~~~lG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 750 (799)
..++|...+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++.+++||||+++++++.+.+..++|
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 99 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEE
Confidence 3456888999999999999999964 78999999986542 33467899999999999999999999999999999999
Q ss_pred EecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 751 YEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 751 ~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
+||+++|+|.+++.... .+++..+..++.||+.||+|||+
T Consensus 100 ~e~~~~~~L~~~l~~~~---------~~~~~~~~~i~~qi~~~l~~LH~ 139 (287)
T 2wei_A 100 GELYTGGELFDEIIKRK---------RFSEHDAARIIKQVFSGITYMHK 139 (287)
T ss_dssp ECCCCSCBHHHHHHHHS---------SCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEccCCCCHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999987543 57788999999999999999994
No 282
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=99.48 E-value=2.1e-14 Score=154.11 Aligned_cols=133 Identities=19% Similarity=0.316 Sum_probs=107.0
Q ss_pred cHHHHHHhhcCCCCCCeecccCCeeEEEEEeC------CCcEEEEEEccccC-hhhHHHHHHHHHHHHhCCCCcccceeE
Q 003737 667 TLRQIKAATNNFDPANKVGEGGFGSVYKGILS------DGTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYG 739 (799)
Q Consensus 667 ~~~~~~~~t~~f~~~~~lG~G~~g~Vy~~~~~------~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g 739 (799)
..++++...++|...+.||+|+||.||+|... +++.||||.+.... ......|.+|++++.+++||||+++++
T Consensus 16 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~ 95 (322)
T 1p4o_A 16 VPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLG 95 (322)
T ss_dssp CCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEE
T ss_pred ChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEE
Confidence 33445556778999999999999999999853 46789999997543 334567999999999999999999999
Q ss_pred EEEECCEEEEEEecCCCCcHHHHHhcCccccc-ccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 740 CCVEGNQLLLVYEYMKNNCLSRAIFGKLRIFH-ISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 740 ~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~-~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
++.+.+..++||||+++|+|.++++....... ......+++..+..++.||+.||+|||+
T Consensus 96 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~ 156 (322)
T 1p4o_A 96 VVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA 156 (322)
T ss_dssp EECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999975432100 0111246778888899999999999994
No 283
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.48 E-value=5.4e-14 Score=149.13 Aligned_cols=116 Identities=19% Similarity=0.340 Sum_probs=98.5
Q ss_pred hcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccChhhHHHHHHHHHHHHhCCCCcccceeEEEEE----------
Q 003737 675 TNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVE---------- 743 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~---------- 743 (799)
.++|+..+.||+|+||.||+|.. .+|+.||||++... ....+.+.+|++++.+++||||+++++++.+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 35688889999999999999995 57899999999643 3345789999999999999999999999865
Q ss_pred ---CCEEEEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 744 ---GNQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 744 ---~~~~~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
.+..++||||+++|+|.+++..... .+++..+..++.|+++||+|||+
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~--------~~~~~~~~~i~~qi~~~l~~LH~ 134 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIHSENL--------NQQRDEYWRLFRQILEALSYIHS 134 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHHHSCG--------GGCHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCceEEEEecCCCCCHHHhhhcccc--------ccchHHHHHHHHHHHHHHHHHHh
Confidence 3568999999999999999985432 45667888889999999999994
No 284
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=99.48 E-value=7.1e-14 Score=146.67 Aligned_cols=120 Identities=19% Similarity=0.339 Sum_probs=101.0
Q ss_pred hcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccC--hhhHHHHHHHHHHHHhCCCCcccceeEEEEE--CCEEEE
Q 003737 675 TNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVE--GNQLLL 749 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~--~~~~~l 749 (799)
.++|+..+.||+|+||.||++.. .+|+.||+|++.... ....+.+.+|++++.+++||||+++++++.+ .+..++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 35678889999999999999995 478999999997542 3345789999999999999999999998865 568999
Q ss_pred EEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 750 VYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 750 V~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
||||+++|+|.+++...... ...+++..+..++.|++.||+|||+
T Consensus 85 v~e~~~~~~L~~~l~~~~~~-----~~~~~~~~~~~i~~~i~~~l~~lH~ 129 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKE-----RQYLDEEFVLRVMTQLTLALKECHR 129 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHT-----TCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCCCCCHHHHHHhhccc-----CCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999754311 1147788999999999999999994
No 285
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=99.48 E-value=4.8e-14 Score=151.53 Aligned_cols=115 Identities=15% Similarity=0.269 Sum_probs=96.0
Q ss_pred hcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccCh--------hhHHHHHHHHHHHHhCCCCcccceeEEEEECC
Q 003737 675 TNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSR--------QGNREFVNEIGMISAQQHPNLVKLYGCCVEGN 745 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~--------~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~ 745 (799)
.++|...+.||+|+||.||+|.. .+++.||||.+..... .....+.+|++++.+++||||+++++++...+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 35688889999999999999995 4689999999865321 12346889999999999999999999987655
Q ss_pred EEEEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 746 QLLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 746 ~~~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
.++||||+++|+|.+++.... .+++..+..++.||++||+|||+
T Consensus 89 -~~lv~e~~~~~~L~~~~~~~~---------~~~~~~~~~~~~qi~~~l~~lH~ 132 (322)
T 2ycf_A 89 -YYIVLELMEGGELFDKVVGNK---------RLKEATCKLYFYQMLLAVQYLHE 132 (322)
T ss_dssp -EEEEEECCTTEETHHHHSTTC---------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred -eEEEEecCCCCcHHHHHhccC---------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999997654 57788999999999999999994
No 286
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.48 E-value=6.8e-14 Score=151.22 Aligned_cols=116 Identities=23% Similarity=0.437 Sum_probs=98.7
Q ss_pred cCCCCCCeecccCCeeEEEEEeCC-----CcEEEEEEccccC-hhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEE
Q 003737 676 NNFDPANKVGEGGFGSVYKGILSD-----GTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLL 749 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~~~-----g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 749 (799)
.+|...+.||+|+||.||+|.... +..||||.++... ......|.+|++++.+++||||+++++++.+.+..++
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 123 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 123 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence 345667899999999999998532 2469999997653 3345689999999999999999999999999999999
Q ss_pred EEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 750 VYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 750 V~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
||||+++|+|.+++..... .+++..+..++.||++||+|||+
T Consensus 124 v~e~~~~~~L~~~l~~~~~--------~~~~~~~~~i~~qi~~aL~~LH~ 165 (333)
T 1mqb_A 124 ITEYMENGALDKFLREKDG--------EFSVLQLVGMLRGIAAGMKYLAN 165 (333)
T ss_dssp EEECCTTEEHHHHHHHTTT--------CSCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCCCCcHHHHHHhCCC--------CCCHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999976432 57788899999999999999994
No 287
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=99.48 E-value=3.1e-14 Score=155.38 Aligned_cols=115 Identities=20% Similarity=0.299 Sum_probs=100.4
Q ss_pred cCCCCCCeecccCCeeEEEEEe----CCCcEEEEEEccccC----hhhHHHHHHHHHHHHhC-CCCcccceeEEEEECCE
Q 003737 676 NNFDPANKVGEGGFGSVYKGIL----SDGTVIAVKQLSSKS----RQGNREFVNEIGMISAQ-QHPNLVKLYGCCVEGNQ 746 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~----~~g~~vAvK~l~~~~----~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~ 746 (799)
++|...+.||+|+||.||+++. .+|+.||||+++... ....+.+.+|++++.++ +||||+++++++...+.
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 133 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 133 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence 5688889999999999999986 378999999996532 22345688899999999 69999999999999999
Q ss_pred EEEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 747 LLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 747 ~~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
.++||||+++|+|.+++.... .+++..+..++.||++||+|||+
T Consensus 134 ~~lv~e~~~~~~L~~~l~~~~---------~~~~~~~~~~~~qi~~aL~~LH~ 177 (355)
T 1vzo_A 134 LHLILDYINGGELFTHLSQRE---------RFTEHEVQIYVGEIVLALEHLHK 177 (355)
T ss_dssp EEEEECCCCSCBHHHHHHHHS---------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeecCCCCCHHHHHHHcC---------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998654 57788999999999999999994
No 288
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=99.48 E-value=8.3e-14 Score=150.33 Aligned_cols=115 Identities=23% Similarity=0.385 Sum_probs=100.3
Q ss_pred cCCCCCCeecccCCeeEEEEEeC-CCcEEEEEEccccC--hhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEEe
Q 003737 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYE 752 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 752 (799)
++|+..+.||+|+||.||+|... +|+.||||++.... ....+.+.+|++++.+++||||+++++++.+.+..++|||
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 104 (331)
T 4aaa_A 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFE 104 (331)
T ss_dssp GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEe
Confidence 45778899999999999999964 68999999986543 2334678899999999999999999999999999999999
Q ss_pred cCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 753 YMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 753 y~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
|+++++|.+++.... .+++..+..++.||+.||+|||+
T Consensus 105 ~~~~~~l~~~~~~~~---------~~~~~~~~~~~~qi~~~l~~LH~ 142 (331)
T 4aaa_A 105 FVDHTILDDLELFPN---------GLDYQVVQKYLFQIINGIGFCHS 142 (331)
T ss_dssp CCSEEHHHHHHHSTT---------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCcchHHHHHhhcc---------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999998876544 57788999999999999999994
No 289
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=99.47 E-value=7.9e-14 Score=150.19 Aligned_cols=123 Identities=22% Similarity=0.273 Sum_probs=100.2
Q ss_pred hcCCCCCCeecccCCeeEEEEEe------CCCcEEEEEEcccc-ChhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEE
Q 003737 675 TNNFDPANKVGEGGFGSVYKGIL------SDGTVIAVKQLSSK-SRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQL 747 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~~------~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~ 747 (799)
.++|...+.||+|+||.||+|.. .+++.||||++... .......+.+|++++.+++||||+++++++...+..
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 45688889999999999999983 35778999999754 344567899999999999999999999999999999
Q ss_pred EEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 748 LLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 748 ~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
++||||+++|+|.+++....... .....+++..+..++.||++||+|||+
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~--~~~~~~~~~~~~~i~~qi~~al~~LH~ 158 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRP--SQPSSLAMLDLLHVARDIACGCQYLEE 158 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCS--SSTTSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEecCCCCcHHHHHHhhcccc--cccccccHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999998654211 112257788889999999999999994
No 290
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=99.47 E-value=7.1e-14 Score=150.63 Aligned_cols=115 Identities=22% Similarity=0.481 Sum_probs=92.7
Q ss_pred cCCCCCCeecccCCeeEEEEEe-CCCc----EEEEEEccccC-hhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEE
Q 003737 676 NNFDPANKVGEGGFGSVYKGIL-SDGT----VIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLL 749 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~-~~g~----~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 749 (799)
++|+..+.||+|+||.||+|.. .+++ .||+|.++... ....+.|.+|++++.+++|||||+++++|.+.+ .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~ 93 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEE
Confidence 4577889999999999999994 3444 36888886542 345678999999999999999999999998755 789
Q ss_pred EEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 750 VYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 750 V~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
|+||+++|+|.++++.... .+++..+..++.||++||+|||+
T Consensus 94 v~e~~~~g~L~~~l~~~~~--------~~~~~~~~~~~~qi~~~l~~LH~ 135 (327)
T 3poz_A 94 ITQLMPFGCLLDYVREHKD--------NIGSQYLLNWCVQIAKGMNYLED 135 (327)
T ss_dssp EEECCTTCBHHHHHHHSTT--------SCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCCCcHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999986532 57788899999999999999994
No 291
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=99.47 E-value=7.2e-14 Score=149.18 Aligned_cols=113 Identities=27% Similarity=0.529 Sum_probs=95.8
Q ss_pred cCCCCCCeecccCCeeEEEEEeCCCcEEEEEEccccChhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEEecCC
Q 003737 676 NNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYMK 755 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~ 755 (799)
++|+..+.||+|+||.||++... ++.||||++... ...+.|.+|++++.+++||||+++++++. +..++||||++
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~ 82 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAE 82 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCT
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCC
Confidence 45677889999999999999974 788999999643 34578999999999999999999999876 45799999999
Q ss_pred CCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 756 NNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 756 ~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
+|+|.++++..... ..+++..+..++.|+++||+|||+
T Consensus 83 ~~~L~~~l~~~~~~------~~~~~~~~~~~~~qi~~~l~~LH~ 120 (307)
T 2eva_A 83 GGSLYNVLHGAEPL------PYYTAAHAMSWCLQCSQGVAYLHS 120 (307)
T ss_dssp TCBHHHHHHCSSSE------ECCCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHhccCCC------CccCHHHHHHHHHHHHHHHHHHHh
Confidence 99999999865421 135677888889999999999995
No 292
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=99.47 E-value=3.6e-14 Score=154.09 Aligned_cols=117 Identities=18% Similarity=0.309 Sum_probs=100.8
Q ss_pred hcCCCCCCeecccCCeeEEEEEeCCCcEEEEEEccccChhh-----------------HHHHHHHHHHHHhCCCCcccce
Q 003737 675 TNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQG-----------------NREFVNEIGMISAQQHPNLVKL 737 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~-----------------~~~f~~E~~~l~~l~H~niv~l 737 (799)
.++|...+.||+|+||.||+|.. +|+.||||++....... .+.|.+|++++.+++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 45788899999999999999998 89999999986532111 1789999999999999999999
Q ss_pred eEEEEECCEEEEEEecCCCCcHHHH------HhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 738 YGCCVEGNQLLLVYEYMKNNCLSRA------IFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 738 ~g~~~~~~~~~lV~Ey~~~GsL~~~------L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
++++.+.+..++||||+++|+|.++ +.... ...+++..+..++.||+.||+|||+
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~-------~~~~~~~~~~~i~~qi~~~l~~lH~ 169 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNY-------TCFIPIQVIKCIIKSVLNSFSYIHN 169 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSS-------CCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhcc-------ccCCCHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999998 44321 1267888999999999999999994
No 293
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=99.47 E-value=6.1e-14 Score=151.15 Aligned_cols=127 Identities=17% Similarity=0.298 Sum_probs=104.2
Q ss_pred ccHHHHHHhhcCCCCC-CeecccCCeeEEEEEe-CCCcEEEEEEccccC--hhhHHHHHHHHHHHHhCC-CCcccceeEE
Q 003737 666 YTLRQIKAATNNFDPA-NKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQ-HPNLVKLYGC 740 (799)
Q Consensus 666 ~~~~~~~~~t~~f~~~-~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~-H~niv~l~g~ 740 (799)
..+...+...+.|... +.||+|+||.||+|.. .+|+.||||++.... ......+.+|++++.+++ ||||++++++
T Consensus 18 ~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~ 97 (327)
T 3lm5_A 18 LYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEV 97 (327)
T ss_dssp CCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEE
T ss_pred hHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEE
Confidence 3334444455556665 7899999999999995 468999999997542 234678999999999995 6999999999
Q ss_pred EEECCEEEEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 741 CVEGNQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 741 ~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
+.+.+..++||||+++|+|.+++...... .+++..+..++.|++.||+|||+
T Consensus 98 ~~~~~~~~lv~e~~~~~~L~~~~~~~~~~-------~~~~~~~~~i~~ql~~~L~~LH~ 149 (327)
T 3lm5_A 98 YENTSEIILILEYAAGGEIFSLCLPELAE-------MVSENDVIRLIKQILEGVYYLHQ 149 (327)
T ss_dssp EECSSEEEEEEECCTTEEGGGGGSSCC-C-------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCeEEEEEEecCCCcHHHHHHHhccc-------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998654322 57888999999999999999994
No 294
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=99.47 E-value=5.1e-14 Score=150.55 Aligned_cols=134 Identities=20% Similarity=0.332 Sum_probs=106.1
Q ss_pred ccHHHHHHhhcCCCCCCeecccCCeeEEEEEe------CCCcEEEEEEccccC-hhhHHHHHHHHHHHHhC-CCCcccce
Q 003737 666 YTLRQIKAATNNFDPANKVGEGGFGSVYKGIL------SDGTVIAVKQLSSKS-RQGNREFVNEIGMISAQ-QHPNLVKL 737 (799)
Q Consensus 666 ~~~~~~~~~t~~f~~~~~lG~G~~g~Vy~~~~------~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l-~H~niv~l 737 (799)
+...++....++|...+.||+|+||.||+|.. .+++.||||+++... ....+.+.+|++++.++ +||||+++
T Consensus 17 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 96 (316)
T 2xir_A 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 96 (316)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred ccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence 34455555677899999999999999999983 356899999997653 33456899999999999 79999999
Q ss_pred eEEEEECC-EEEEEEecCCCCcHHHHHhcCcccccc-------cccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 738 YGCCVEGN-QLLLVYEYMKNNCLSRAIFGKLRIFHI-------SIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 738 ~g~~~~~~-~~~lV~Ey~~~GsL~~~L~~~~~~~~~-------~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
++++...+ ..++||||+++|+|.+++......... .....+++..+..++.||++||+|||+
T Consensus 97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~ 166 (316)
T 2xir_A 97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 166 (316)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHh
Confidence 99988754 589999999999999999865421100 001136788899999999999999994
No 295
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=99.47 E-value=7.5e-14 Score=146.73 Aligned_cols=113 Identities=20% Similarity=0.354 Sum_probs=96.7
Q ss_pred cCCCCCCeecccCCeeEEEEEeC-CCcEEEEEEccccChhhHHHHHHHHHHHHhCCCCcccceeEEEEE-----------
Q 003737 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVE----------- 743 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~----------- 743 (799)
.+|+..+.||+|+||.||+|... +|+.||+|++.... +.+.+|++++.+++||||+++++++..
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 86 (284)
T 2a19_B 11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKN 86 (284)
T ss_dssp HHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-------
T ss_pred cccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccccc
Confidence 45788899999999999999964 79999999997543 357789999999999999999998864
Q ss_pred -----CCEEEEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 744 -----GNQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 744 -----~~~~~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
....++||||+++|+|.+++...... .+++..+..++.||++||+|||+
T Consensus 87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~-------~~~~~~~~~i~~qi~~~l~~lH~ 140 (284)
T 2a19_B 87 SSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE-------KLDKVLALELFEQITKGVDYIHS 140 (284)
T ss_dssp --CCEEEEEEEEECCCCSCBHHHHHHHGGGS-------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCcceEEEEEeccCCCCHHHHHhhccCC-------CCCHHHHHHHHHHHHHHHHHHHh
Confidence 34579999999999999999754321 57788899999999999999994
No 296
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.47 E-value=2.7e-16 Score=156.79 Aligned_cols=146 Identities=22% Similarity=0.296 Sum_probs=82.2
Q ss_pred CCCCCEEEccCCcCCCcCcc------cccccc-eeEEEccCCcCcCcCCcccCCCCCCCEEEeeCCcCCCCCCccccCCC
Q 003737 115 LRYLKQLDLSRNCLTGSFSP------QWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLI 187 (799)
Q Consensus 115 l~~L~~L~Ls~N~l~~~~p~------~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~ 187 (799)
...++.++++.+.+.+.+|. .+..++ |++|++++|.+++ +| .+..+++|++|++++|.++ .+|..+..++
T Consensus 17 ~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~ 93 (198)
T 1ds9_A 17 RKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVAD 93 (198)
T ss_dssp TTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHH
T ss_pred cccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCC
Confidence 34444444444444444443 444444 5555555555554 44 5556666666666666665 4555555556
Q ss_pred CCCEEEcccCcCCccCChhccCCCCCCEEEccCCcCCCcCC-ccccCCCCCCEEEccCCCCCCCCch----------hhh
Q 003737 188 NLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIP-EFIGKWKKIQKLHIQGSSLEGPIPA----------SIS 256 (799)
Q Consensus 188 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~----------~~~ 256 (799)
+|++|++++|++++ +| .+..+++|++|++++|++++..+ ..+..+++|++|++++|.+++.+|. .+.
T Consensus 94 ~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~ 171 (198)
T 1ds9_A 94 TLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVK 171 (198)
T ss_dssp HCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHH
T ss_pred cCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHH
Confidence 66666666666664 33 45566666666666666653222 3556666666666666666554443 256
Q ss_pred cCCCCCeEE
Q 003737 257 ALTSLTDLR 265 (799)
Q Consensus 257 ~l~~L~~L~ 265 (799)
.+++|+.||
T Consensus 172 ~l~~L~~Ld 180 (198)
T 1ds9_A 172 RLPNLKKLD 180 (198)
T ss_dssp HCSSCSEEC
T ss_pred hCCCcEEEC
Confidence 666666665
No 297
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=99.47 E-value=6.7e-14 Score=158.22 Aligned_cols=115 Identities=15% Similarity=0.312 Sum_probs=90.2
Q ss_pred hcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEcccc--ChhhHHHHHHHHHHHHhCCCCcccceeEEEEEC-----CE
Q 003737 675 TNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSK--SRQGNREFVNEIGMISAQQHPNLVKLYGCCVEG-----NQ 746 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~-----~~ 746 (799)
.++|...+.||+|+||+||+|.. .+|+.||||++... .....+.+.+|++++.+++|||||++++++... +.
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 35788899999999999999984 47899999999653 333457899999999999999999999998543 56
Q ss_pred EEEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 747 LLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 747 ~~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
.|+||||+. |+|.+++.... .+++..++.++.||+.||+|||+
T Consensus 132 ~~lv~e~~~-~~L~~~~~~~~---------~l~~~~~~~~~~qi~~aL~~LH~ 174 (458)
T 3rp9_A 132 LYVVLEIAD-SDFKKLFRTPV---------YLTELHIKTLLYNLLVGVKYVHS 174 (458)
T ss_dssp EEEEECCCS-EEHHHHHHSSC---------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeccc-cchhhhcccCC---------CCCHHHHHHHHHHHHHHHHHHHh
Confidence 899999985 79999997654 57888999999999999999994
No 298
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.46 E-value=7.4e-14 Score=150.18 Aligned_cols=124 Identities=23% Similarity=0.405 Sum_probs=105.0
Q ss_pred HHHHHHhhcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccChhhHHHHHHHHHHHHhC-CCCcccceeEEEEE--
Q 003737 668 LRQIKAATNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSRQGNREFVNEIGMISAQ-QHPNLVKLYGCCVE-- 743 (799)
Q Consensus 668 ~~~~~~~t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~-- 743 (799)
..++....++|+..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|++++.++ +||||+++++++..
T Consensus 16 ~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 94 (326)
T 2x7f_A 16 LSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKN 94 (326)
T ss_dssp CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC
T ss_pred chhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeecc
Confidence 334445678899999999999999999995 578999999986543 2356899999999998 89999999999987
Q ss_pred ----CCEEEEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 744 ----GNQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 744 ----~~~~~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
.+..++||||+++|+|.+++...... .+++..+..++.||+.||+|||+
T Consensus 95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~-------~~~~~~~~~i~~qi~~~l~~lH~ 147 (326)
T 2x7f_A 95 PPGMDDQLWLVMEFCGAGSVTDLIKNTKGN-------TLKEEWIAYICREILRGLSHLHQ 147 (326)
T ss_dssp --CCCCEEEEEEECCTTEEHHHHHHHSGGG-------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CccccceEEEEEEcCCCCcHHHHHHhcccC-------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 46789999999999999999865321 57888899999999999999994
No 299
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=99.46 E-value=1.1e-13 Score=150.13 Aligned_cols=114 Identities=16% Similarity=0.231 Sum_probs=100.2
Q ss_pred cCCCCCCeecccCCeeEEEEEeCCCcEEEEEEcccc--ChhhHHHHHHHHHHHHhCCC--CcccceeEEEEECCEEEEEE
Q 003737 676 NNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSK--SRQGNREFVNEIGMISAQQH--PNLVKLYGCCVEGNQLLLVY 751 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H--~niv~l~g~~~~~~~~~lV~ 751 (799)
+.|+..+.||+|+||.||++...+++.||||++... .....+.+.+|++++.+++| +||+++++++.+++..++||
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 88 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 88 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEE
Confidence 457788999999999999999888999999998654 33445789999999999987 99999999999999999999
Q ss_pred ecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 752 EYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 752 Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
| +.+|+|.+++.... .+++..+..++.||++||+|||+
T Consensus 89 e-~~~~~L~~~l~~~~---------~~~~~~~~~i~~qi~~al~~lH~ 126 (343)
T 3dbq_A 89 E-CGNIDLNSWLKKKK---------SIDPWERKSYWKNMLEAVHTIHQ 126 (343)
T ss_dssp C-CCSEEHHHHHHHSC---------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred e-CCCCCHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHHh
Confidence 9 56889999998754 57788899999999999999994
No 300
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=99.46 E-value=2.2e-13 Score=144.58 Aligned_cols=110 Identities=21% Similarity=0.369 Sum_probs=93.6
Q ss_pred hcCCCCCCeecccCCeeEEEEEeCCCcEEEEEEccccChhhHHHHHHHHHHHHh--CCCCcccceeEEEEEC----CEEE
Q 003737 675 TNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISA--QQHPNLVKLYGCCVEG----NQLL 748 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~--l~H~niv~l~g~~~~~----~~~~ 748 (799)
.++|+..+.||+|+||.||+|.. +|+.||||++... ..+.+.+|.+++.. ++||||+++++++... ...+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~ 82 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW 82 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence 45788899999999999999987 6899999998653 34567777777776 7999999999997653 4589
Q ss_pred EEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhc
Q 003737 749 LVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFF 798 (799)
Q Consensus 749 lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH 798 (799)
+||||+++|+|.++++.. .+++..+..++.||++||+|||
T Consensus 83 lv~e~~~~g~L~~~l~~~----------~~~~~~~~~i~~~i~~~l~~lH 122 (301)
T 3q4u_A 83 LITHYHEMGSLYDYLQLT----------TLDTVSCLRIVLSIASGLAHLH 122 (301)
T ss_dssp EEECCCTTCBHHHHHTTC----------CBCHHHHHHHHHHHHHHHHHHH
T ss_pred EehhhccCCCHHHHHhhc----------ccCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999643 4678888899999999999999
No 301
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=99.46 E-value=8.9e-14 Score=155.97 Aligned_cols=115 Identities=16% Similarity=0.317 Sum_probs=100.0
Q ss_pred hcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEcccc--ChhhHHHHHHHHHHHHhCCCCcccceeEEEEEC-----CE
Q 003737 675 TNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSK--SRQGNREFVNEIGMISAQQHPNLVKLYGCCVEG-----NQ 746 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~-----~~ 746 (799)
.++|...+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|++++.+++|+|||++++++... +.
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 46788899999999999999995 57889999999754 333457899999999999999999999999776 57
Q ss_pred EEEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 747 LLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 747 ~~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
.|+||||++ |+|.++++... .+++..++.++.||++||+|||+
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~~---------~l~~~~~~~i~~qil~aL~~LH~ 147 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTPI---------FLTEEHIKTILYNLLLGENFIHE 147 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSSC---------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEecCC-cCHHHHHhccC---------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 899999997 59999998654 57888999999999999999994
No 302
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=99.46 E-value=1.3e-13 Score=146.21 Aligned_cols=116 Identities=27% Similarity=0.459 Sum_probs=97.6
Q ss_pred cCCCCCCeecccCCeeEEEEEeC-CCcEEEEEEccccCh--hhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEEe
Q 003737 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSR--QGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYE 752 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 752 (799)
++|+..+.||+|+||.||+|... +|+.||||++..... ...+.+.+|++++.+++||||+++++++..++..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 46788899999999999999964 789999999965432 234678999999999999999999999999999999999
Q ss_pred cCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 753 YMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 753 y~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
|++ |+|.+++...... .+++..+..++.||++||+|||+
T Consensus 83 ~~~-~~L~~~~~~~~~~-------~~~~~~~~~~~~~i~~~l~~lH~ 121 (299)
T 2r3i_A 83 FLH-QDLKKFMDASALT-------GIPLPLIKSYLFQLLQGLAFCHS 121 (299)
T ss_dssp CCS-EEHHHHHHHTTTT-------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccc-CCHHHHHHhhhcc-------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 998 6999999765321 56788899999999999999994
No 303
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=99.46 E-value=1.5e-13 Score=161.35 Aligned_cols=108 Identities=22% Similarity=0.366 Sum_probs=93.2
Q ss_pred CeecccCCeeEEEEEe---CCCcEEEEEEccccC--hhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEEecCCC
Q 003737 682 NKVGEGGFGSVYKGIL---SDGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYMKN 756 (799)
Q Consensus 682 ~~lG~G~~g~Vy~~~~---~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~ 756 (799)
+.||+|+||.||+|.. ..++.||||+++... ....++|.+|++++.+++|||||+++++|. .+..++|||||++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCCEEEEEEccCC
Confidence 4799999999999974 346789999997643 234578999999999999999999999996 4568899999999
Q ss_pred CcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 757 NCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 757 GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
|+|.++++... .+++..+..++.||+.||+|||+
T Consensus 454 g~L~~~l~~~~---------~l~~~~~~~i~~qi~~~L~yLH~ 487 (635)
T 4fl3_A 454 GPLNKYLQQNR---------HVKDKNIIELVHQVSMGMKYLEE 487 (635)
T ss_dssp EEHHHHHHHCT---------TCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHhhCC---------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999997654 57788899999999999999994
No 304
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.46 E-value=1.3e-13 Score=147.64 Aligned_cols=114 Identities=19% Similarity=0.327 Sum_probs=94.1
Q ss_pred hcCCCCCCeecccCCeeEEEEEeC-CCcEEEEEEccccChhhHHHHHHHHHHHHhCCCCcccceeEEEE-----------
Q 003737 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCV----------- 742 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~----------- 742 (799)
.++|...+.||+|+||.||+|... +|+.||||++........+.+.+|++++.+++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 356788899999999999999964 58999999998766666788999999999999999999999873
Q ss_pred ---ECCEEEEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 743 ---EGNQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 743 ---~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
+.+..++||||++ |+|.+++... .+++..+..++.|+++||+|||+
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~~----------~~~~~~~~~~~~qi~~~l~~lH~ 138 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQG----------PLLEEHARLFMYQLLRGLKYIHS 138 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTTC----------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccCceeEEeeccC-CCHHHHhhcC----------CccHHHHHHHHHHHHHHHHHHHh
Confidence 3467899999998 6999998643 46788899999999999999994
No 305
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.46 E-value=1.2e-13 Score=147.67 Aligned_cols=116 Identities=30% Similarity=0.576 Sum_probs=96.3
Q ss_pred hhcCCCCCCeecccCCeeEEEEEeC-CCcEEEEEEccccChhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEEe
Q 003737 674 ATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYE 752 (799)
Q Consensus 674 ~t~~f~~~~~lG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 752 (799)
..+.|+..+.||+|+||.||+|... +|+.||||.+.... ..+.+.+|++++.+++||||+++++++.+.+..++|||
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 104 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME 104 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence 4567888999999999999999964 68999999997543 34679999999999999999999999999999999999
Q ss_pred cCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 753 YMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 753 y~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
|+++|+|.+++..... .+++..+..++.||+.||+|||+
T Consensus 105 ~~~~~~L~~~~~~~~~--------~~~~~~~~~i~~~i~~~l~~lH~ 143 (314)
T 3com_A 105 YCGAGSVSDIIRLRNK--------TLTEDEIATILQSTLKGLEYLHF 143 (314)
T ss_dssp CCTTEEHHHHHHHHTC--------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999974321 57788999999999999999994
No 306
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=99.46 E-value=3.6e-14 Score=153.54 Aligned_cols=116 Identities=16% Similarity=0.234 Sum_probs=100.9
Q ss_pred hcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccCh--------hhHHHHHHHHHHHHhCCCCcccceeEEEEECC
Q 003737 675 TNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSR--------QGNREFVNEIGMISAQQHPNLVKLYGCCVEGN 745 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~--------~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~ 745 (799)
.++|...+.||+|+||.||+|.. .+++.||||++..... ...+.+.+|++++.+++||||+++++++.+.+
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~ 102 (335)
T 3dls_A 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG 102 (335)
T ss_dssp HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence 45688899999999999999984 5789999999975421 12346788999999999999999999999999
Q ss_pred EEEEEEecCCCC-cHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 746 QLLLVYEYMKNN-CLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 746 ~~~lV~Ey~~~G-sL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
..++||||+.+| +|.+++.... .+++..+..++.||+.||+|||+
T Consensus 103 ~~~lv~e~~~~g~~l~~~~~~~~---------~l~~~~~~~i~~qi~~~L~~LH~ 148 (335)
T 3dls_A 103 FFQLVMEKHGSGLDLFAFIDRHP---------RLDEPLASYIFRQLVSAVGYLRL 148 (335)
T ss_dssp EEEEEEECCTTSCBHHHHHHTCC---------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEeCCCCccHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHHh
Confidence 999999999887 9999998654 57888999999999999999994
No 307
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=99.46 E-value=9.8e-14 Score=149.68 Aligned_cols=114 Identities=20% Similarity=0.237 Sum_probs=98.8
Q ss_pred hcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccChhhHHHHHHHHHHHHhC-CCCcccceeEEEEECCEEEEEEe
Q 003737 675 TNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSRQGNREFVNEIGMISAQ-QHPNLVKLYGCCVEGNQLLLVYE 752 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~E 752 (799)
.++|...+.||+|+||.||+|.. .+|+.||||.+..... .+.+.+|++++.++ +|+||+++++++...+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 85 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE 85 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence 35688889999999999999994 6789999999865422 34688999999999 99999999999999999999999
Q ss_pred cCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 753 YMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 753 y~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
|+ +|+|.+++..... .+++..+..++.||++||+|||+
T Consensus 86 ~~-~~~L~~~~~~~~~--------~~~~~~~~~i~~qi~~~l~~LH~ 123 (330)
T 2izr_A 86 LL-GPSLEDLFDLCDR--------TFSLKTVLMIAIQLISRMEYVHS 123 (330)
T ss_dssp CC-CCBHHHHHHHTTT--------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred eC-CCCHHHHHHHcCC--------CCCHHHHHHHHHHHHHHHHHHHh
Confidence 99 9999999986422 57888999999999999999994
No 308
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=99.46 E-value=1.2e-13 Score=146.00 Aligned_cols=114 Identities=22% Similarity=0.359 Sum_probs=95.6
Q ss_pred cCCCCCC-eecccCCeeEEEEEe---CCCcEEEEEEccccC--hhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEE
Q 003737 676 NNFDPAN-KVGEGGFGSVYKGIL---SDGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLL 749 (799)
Q Consensus 676 ~~f~~~~-~lG~G~~g~Vy~~~~---~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 749 (799)
++|...+ .||+|+||.||+|.. .+++.||||+++... ....+.+.+|++++.+++||||+++++++ ..+..++
T Consensus 16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~l 94 (291)
T 1xbb_A 16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWML 94 (291)
T ss_dssp GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEE
T ss_pred hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEE
Confidence 4466666 899999999999963 346899999997543 22357899999999999999999999999 6677899
Q ss_pred EEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 750 VYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 750 V~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
||||+++|+|.+++.... .+++..+..++.||++||+|||+
T Consensus 95 v~e~~~~~~L~~~l~~~~---------~~~~~~~~~i~~qi~~~l~~LH~ 135 (291)
T 1xbb_A 95 VMEMAELGPLNKYLQQNR---------HVKDKNIIELVHQVSMGMKYLEE 135 (291)
T ss_dssp EEECCTTEEHHHHHHHCT---------TCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCCHHHHHHhCc---------CCCHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999998654 57788899999999999999994
No 309
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.46 E-value=1.1e-13 Score=135.10 Aligned_cols=126 Identities=14% Similarity=0.200 Sum_probs=100.6
Q ss_pred ceeEEEccCCcCcCcCCcccCCCCCCCEEEeeCCcCCCCCCccccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEcc
Q 003737 140 QLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRIS 219 (799)
Q Consensus 140 ~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 219 (799)
+|++|++++|+++. +|......++|++|+|++|.+++. ..|..+++|++|++++|++++..+..+..+++|++|+++
T Consensus 20 ~L~~L~l~~n~l~~-i~~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 96 (176)
T 1a9n_A 20 RDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILT 96 (176)
T ss_dssp SCEEEECTTSCCCS-CCCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECC
T ss_pred CceEEEeeCCCCch-hHHhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECC
Confidence 38999999999984 455333344999999999999864 678889999999999999986555556889999999999
Q ss_pred CCcCCCcCCc--cccCCCCCCEEEccCCCCCCCCch----hhhcCCCCCeEEcCCCC
Q 003737 220 DNNFSGKIPE--FIGKWKKIQKLHIQGSSLEGPIPA----SISALTSLTDLRISDLK 270 (799)
Q Consensus 220 ~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~----~~~~l~~L~~L~L~~n~ 270 (799)
+|+++ .+|. .+..+++|++|++++|.++. +|. .+..+++|+.|++++|.
T Consensus 97 ~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n~ 151 (176)
T 1a9n_A 97 NNSLV-ELGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKVK 151 (176)
T ss_dssp SCCCC-CGGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEETTEECC
T ss_pred CCcCC-cchhhHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCccceeCCCcCC
Confidence 99996 4565 78889999999999999874 455 37888888888887644
No 310
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=99.45 E-value=6.8e-14 Score=148.57 Aligned_cols=125 Identities=16% Similarity=0.294 Sum_probs=87.8
Q ss_pred hhcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccC-hhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEE
Q 003737 674 ATNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 751 (799)
Q Consensus 674 ~t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 751 (799)
..++|...+.||+|+||.||+|.. .+++.||||++.... ....+++.+|++++.+++||||+++++++...+..++||
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (303)
T 2vwi_A 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVM 92 (303)
T ss_dssp CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEE
T ss_pred chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEe
Confidence 456788899999999999999984 578999999986543 234567899999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 752 EYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 752 Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
||+++|+|.+++...... .......+++..+..++.||++||+|||+
T Consensus 93 e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~~~~~i~~qi~~~l~~lH~ 139 (303)
T 2vwi_A 93 KLLSGGSVLDIIKHIVAK-GEHKSGVLDESTIATILREVLEGLEYLHK 139 (303)
T ss_dssp ECCTTCBHHHHHHHHHHT-TTTTTCSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred hhccCCchHHHHHHHhhc-cccccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999742110 00011157788999999999999999994
No 311
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=99.45 E-value=2.2e-13 Score=146.73 Aligned_cols=124 Identities=25% Similarity=0.438 Sum_probs=98.9
Q ss_pred cCCCCCCeecccCCeeEEEEEe-CCCcE--EEEEEcccc-ChhhHHHHHHHHHHHHhC-CCCcccceeEEEEECCEEEEE
Q 003737 676 NNFDPANKVGEGGFGSVYKGIL-SDGTV--IAVKQLSSK-SRQGNREFVNEIGMISAQ-QHPNLVKLYGCCVEGNQLLLV 750 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~-~~g~~--vAvK~l~~~-~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV 750 (799)
++|...+.||+|+||.||+|.. .+|.. ||||.+... .....+.+.+|++++.++ +||||+++++++.+.+..++|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 4577889999999999999995 45664 499998653 233456799999999999 899999999999999999999
Q ss_pred EecCCCCcHHHHHhcCccccc-------ccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 751 YEYMKNNCLSRAIFGKLRIFH-------ISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 751 ~Ey~~~GsL~~~L~~~~~~~~-------~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
|||+++|+|.+++........ ......+++..+..++.||++||+|||+
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~ 160 (327)
T 1fvr_A 105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ 160 (327)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999986531000 0111257888999999999999999994
No 312
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=99.45 E-value=1.6e-13 Score=145.36 Aligned_cols=114 Identities=23% Similarity=0.329 Sum_probs=95.4
Q ss_pred CCCCCeecccCCeeEEEEEe-CCC---cEEEEEEccccC-hhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEE-EEEE
Q 003737 678 FDPANKVGEGGFGSVYKGIL-SDG---TVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQL-LLVY 751 (799)
Q Consensus 678 f~~~~~lG~G~~g~Vy~~~~-~~g---~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~-~lV~ 751 (799)
|...+.||+|+||.||+|.. .++ ..||+|.+.... ....+.|.+|++++++++||||+++++++.+.+.. ++||
T Consensus 23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~ 102 (298)
T 3pls_A 23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLL 102 (298)
T ss_dssp EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred EccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEE
Confidence 44568899999999999984 233 379999997643 34457899999999999999999999999876655 9999
Q ss_pred ecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 752 EYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 752 Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
||+.+|+|.+++..... .+++..+..++.|+++||+|||+
T Consensus 103 e~~~~~~L~~~~~~~~~--------~~~~~~~~~i~~qi~~~l~~LH~ 142 (298)
T 3pls_A 103 PYMCHGDLLQFIRSPQR--------NPTVKDLISFGLQVARGMEYLAE 142 (298)
T ss_dssp CCCTTCBHHHHHHCTTC--------CCBHHHHHHHHHHHHHHHHHHHH
T ss_pred ecccCCCHHHHHhcccc--------CCCHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999986432 46777888999999999999994
No 313
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=99.45 E-value=1.1e-13 Score=147.89 Aligned_cols=124 Identities=23% Similarity=0.380 Sum_probs=95.8
Q ss_pred HhhcCCCCCCeecccCCeeEEEEEeC----CCcEEEEEEcccc--ChhhHHHHHHHHHHHHhCCCCcccceeEEEEECCE
Q 003737 673 AATNNFDPANKVGEGGFGSVYKGILS----DGTVIAVKQLSSK--SRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQ 746 (799)
Q Consensus 673 ~~t~~f~~~~~lG~G~~g~Vy~~~~~----~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~ 746 (799)
...++|...+.||+|+||.||+|... ++..||||+++.. .....+.+.+|++++.+++||||+++++++.+.+.
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 110 (313)
T 3brb_A 31 IDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSS 110 (313)
T ss_dssp CCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC---
T ss_pred cCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccc
Confidence 34566788899999999999999853 3458999999754 23345789999999999999999999999987553
Q ss_pred -----EEEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 747 -----LLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 747 -----~~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
.++||||+++|+|.+++...... .....+++..+..++.||++||+|||+
T Consensus 111 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~---~~~~~~~~~~~~~i~~qi~~aL~~LH~ 165 (313)
T 3brb_A 111 QGIPKPMVILPFMKYGDLHTYLLYSRLE---TGPKHIPLQTLLKFMVDIALGMEYLSN 165 (313)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHTTBT---TSCCCCCHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCcccEEEEecccCCCHHHHHHHhhhh---cCCccCCHHHHHHHHHHHHHHHHHHHh
Confidence 59999999999999999543211 011257888999999999999999995
No 314
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=99.45 E-value=8.1e-14 Score=153.06 Aligned_cols=114 Identities=27% Similarity=0.402 Sum_probs=94.9
Q ss_pred CCCCCeecccCCeeEEEEEeC--CC--cEEEEEEcccc-ChhhHHHHHHHHHHHHhCCCCcccceeEEEEE-CCEEEEEE
Q 003737 678 FDPANKVGEGGFGSVYKGILS--DG--TVIAVKQLSSK-SRQGNREFVNEIGMISAQQHPNLVKLYGCCVE-GNQLLLVY 751 (799)
Q Consensus 678 f~~~~~lG~G~~g~Vy~~~~~--~g--~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~-~~~~~lV~ 751 (799)
|...+.||+|+||.||+|... ++ ..||||.++.. .....+.|.+|++++++++|||||+++++|.+ ++..++||
T Consensus 91 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~ 170 (373)
T 3c1x_A 91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL 170 (373)
T ss_dssp EEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEE
T ss_pred eecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEE
Confidence 455678999999999999853 22 46899999754 33456789999999999999999999999865 45789999
Q ss_pred ecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 752 EYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 752 Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
||+++|+|.++++.... .+++..+..++.||++||+|||+
T Consensus 171 e~~~~g~L~~~l~~~~~--------~~~~~~~~~i~~qi~~aL~~LH~ 210 (373)
T 3c1x_A 171 PYMKHGDLRNFIRNETH--------NPTVKDLIGFGLQVAKGMKFLAS 210 (373)
T ss_dssp ECCTTCBHHHHHHCTTC--------CCBHHHHHHHHHHHHHHHHHHHH
T ss_pred ECCCCCCHHHHHhhccc--------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999986542 45677888889999999999994
No 315
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=99.45 E-value=7.6e-14 Score=150.63 Aligned_cols=129 Identities=25% Similarity=0.379 Sum_probs=104.1
Q ss_pred HHHhhcCCCCCCeecccCCeeEEEEEeC-CC-----cEEEEEEccccC-hhhHHHHHHHHHHHHhC-CCCcccceeEEEE
Q 003737 671 IKAATNNFDPANKVGEGGFGSVYKGILS-DG-----TVIAVKQLSSKS-RQGNREFVNEIGMISAQ-QHPNLVKLYGCCV 742 (799)
Q Consensus 671 ~~~~t~~f~~~~~lG~G~~g~Vy~~~~~-~g-----~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~ 742 (799)
++...++|...+.||+|+||.||+|... ++ ..||+|.+.... ....+.+.+|++++.++ +||||+++++++.
T Consensus 41 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 120 (333)
T 2i1m_A 41 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACT 120 (333)
T ss_dssp GBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred ccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence 3445678888999999999999999853 22 489999997653 33457899999999999 8999999999999
Q ss_pred ECCEEEEEEecCCCCcHHHHHhcCccccccc-----ccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 743 EGNQLLLVYEYMKNNCLSRAIFGKLRIFHIS-----IYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 743 ~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~~~-----~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
..+..++||||+++|+|.+++.......... ....+++..+..++.||+.||+|||+
T Consensus 121 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~ 182 (333)
T 2i1m_A 121 HGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLAS 182 (333)
T ss_dssp SSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999997543211000 01246788899999999999999994
No 316
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=99.44 E-value=1.6e-13 Score=145.49 Aligned_cols=115 Identities=25% Similarity=0.366 Sum_probs=95.8
Q ss_pred CCCCCCeecccCCeeEEEEEeCC----CcEEEEEEccccC-hhhHHHHHHHHHHHHhCCCCcccceeEEEEE-CCEEEEE
Q 003737 677 NFDPANKVGEGGFGSVYKGILSD----GTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVE-GNQLLLV 750 (799)
Q Consensus 677 ~f~~~~~lG~G~~g~Vy~~~~~~----g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~-~~~~~lV 750 (799)
.|+..+.||+|+||.||+|...+ +..||+|.+.... ....+.+.+|++++++++||||++++++|.+ ++..++|
T Consensus 26 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 105 (298)
T 3f66_A 26 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 105 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred ehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEE
Confidence 46677899999999999998532 2368999987643 3445789999999999999999999999754 5578999
Q ss_pred EecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 751 YEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 751 ~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
|||+++|+|.++++.... .+++..+..++.|+++||+|||+
T Consensus 106 ~e~~~~~~L~~~l~~~~~--------~~~~~~~~~i~~ql~~~l~~lH~ 146 (298)
T 3f66_A 106 LPYMKHGDLRNFIRNETH--------NPTVKDLIGFGLQVAKGMKYLAS 146 (298)
T ss_dssp EECCTTCBHHHHHHCTTC--------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EeCCCCCCHHHHHHhccc--------CCCHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999976432 46777888899999999999994
No 317
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=99.44 E-value=2.1e-13 Score=150.73 Aligned_cols=114 Identities=16% Similarity=0.227 Sum_probs=99.3
Q ss_pred cCCCCCCeecccCCeeEEEEEeCCCcEEEEEEcccc--ChhhHHHHHHHHHHHHhCC--CCcccceeEEEEECCEEEEEE
Q 003737 676 NNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSK--SRQGNREFVNEIGMISAQQ--HPNLVKLYGCCVEGNQLLLVY 751 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~--H~niv~l~g~~~~~~~~~lV~ 751 (799)
..|...+.||+|+||.||++...+++.||||++... .....+.+.+|++++.+++ |+|||++++++...+..++||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 347888999999999999999877999999998654 3344578999999999996 599999999999999999999
Q ss_pred ecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 752 EYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 752 Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
| +.+|+|.+++.... .+++..+..++.||+.||+|||+
T Consensus 136 E-~~~~~L~~~l~~~~---------~~~~~~~~~i~~qi~~aL~~lH~ 173 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKKK---------SIDPWERKSYWKNMLEAVHTIHQ 173 (390)
T ss_dssp E-CCSEEHHHHHHHCS---------SCCHHHHHHHHHHHHHHHHHHHT
T ss_pred e-cCCCCHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 9 56889999998654 56677888899999999999995
No 318
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.44 E-value=1.2e-13 Score=146.66 Aligned_cols=109 Identities=25% Similarity=0.394 Sum_probs=89.0
Q ss_pred cCCCCCCeecccCCeeEEEEEeCCCcEEEEEEccccChhhHHHHHHHHHHHHh--CCCCcccceeEEEEECC----EEEE
Q 003737 676 NNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISA--QQHPNLVKLYGCCVEGN----QLLL 749 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~--l~H~niv~l~g~~~~~~----~~~l 749 (799)
++|...+.||+|+||.||+|+. +|+.||||++... ..+.+.+|.+++.. ++||||+++++++...+ ..++
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 78 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 78 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-C-TTSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEE
T ss_pred ceeeehhhccCCCCeEEEEEEE-cCcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEE
Confidence 5688899999999999999986 4889999998643 34578889998887 79999999999998876 7899
Q ss_pred EEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhc
Q 003737 750 VYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFF 798 (799)
Q Consensus 750 V~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH 798 (799)
||||+++|+|.+++.+. .+++..+..++.|++.||+|||
T Consensus 79 v~e~~~~g~L~~~l~~~----------~~~~~~~~~~~~~i~~~l~~lH 117 (303)
T 3gxj_A 79 VSDYHEHGSLFDYLNRY----------TVTVEGMIKLALSTASGLAHLH 117 (303)
T ss_dssp EEECCTTCCHHHHHHHC----------CBCC-CHHHHC-CHHHHHC-CC
T ss_pred EEeccCCCCHHHHHhcc----------CcchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999654 3445567778999999999999
No 319
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=99.44 E-value=2.1e-13 Score=145.05 Aligned_cols=117 Identities=19% Similarity=0.294 Sum_probs=96.2
Q ss_pred hcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccC----hhhHHHHHHHHHHHHhCCCCcccceeEEEE--ECCEE
Q 003737 675 TNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKS----RQGNREFVNEIGMISAQQHPNLVKLYGCCV--EGNQL 747 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~----~~~~~~f~~E~~~l~~l~H~niv~l~g~~~--~~~~~ 747 (799)
.++|...+.||+|+||.||++.. .+++.||+|++.... ....+.+.+|++++.+++||||+++++++. +.+..
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 46799999999999999999995 578999999997542 234578999999999999999999999985 34578
Q ss_pred EEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 748 LLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 748 ~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
++||||+++| |.+++...... .+++..+..++.||++||+|||+
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~~~-------~~~~~~~~~~~~qi~~al~~LH~ 127 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVPEK-------RFPVCQAHGYFCQLIDGLEYLHS 127 (305)
T ss_dssp EEEEECCSEE-HHHHHHHSTTC-------SCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEehhccCC-HHHHHHhCccc-------ccCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999986 77777653321 57888999999999999999994
No 320
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.44 E-value=1.5e-14 Score=156.49 Aligned_cols=112 Identities=19% Similarity=0.276 Sum_probs=92.2
Q ss_pred cCCCCCCeecccCCeeEEEEEeCCCcEEEEEEccccC--------hhhHHHHHHHHHHHHhCC---------CCccccee
Q 003737 676 NNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKS--------RQGNREFVNEIGMISAQQ---------HPNLVKLY 738 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~~~g~~vAvK~l~~~~--------~~~~~~f~~E~~~l~~l~---------H~niv~l~ 738 (799)
++|+..+.||+|+||+||+|+. +|+.||||++.... ....+.+.+|++++++++ |||||++.
T Consensus 20 ~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~ 98 (336)
T 2vuw_A 20 EKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLN 98 (336)
T ss_dssp HHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEE
T ss_pred ccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhc
Confidence 4577789999999999999997 68999999997542 123478999999998886 88888887
Q ss_pred EEEE------------------------------ECCEEEEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHH
Q 003737 739 GCCV------------------------------EGNQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILII 788 (799)
Q Consensus 739 g~~~------------------------------~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~ 788 (799)
+++. +.+..++||||+++|++.+.+.++ .+++..++.++.
T Consensus 99 ~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~----------~~~~~~~~~i~~ 168 (336)
T 2vuw_A 99 SVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTK----------LSSLATAKSILH 168 (336)
T ss_dssp EEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTT----------CCCHHHHHHHHH
T ss_pred ceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhc----------CCCHHHHHHHHH
Confidence 7643 267899999999999877766432 467889999999
Q ss_pred HHHHHHhhhc
Q 003737 789 SAANNIDFFF 798 (799)
Q Consensus 789 qi~~gL~yLH 798 (799)
||+.||+|||
T Consensus 169 qi~~aL~~lH 178 (336)
T 2vuw_A 169 QLTASLAVAE 178 (336)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999999
No 321
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=99.44 E-value=5e-14 Score=151.64 Aligned_cols=115 Identities=19% Similarity=0.377 Sum_probs=96.5
Q ss_pred cCCCCCCeecccCCeeEEEEEeC-CCcEEEEEEccccChh-hHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEEec
Q 003737 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQ-GNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEY 753 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~~-~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 753 (799)
++|...+.||+|+||.||+|... +++.||||++...... ....+.+|++++.+++||||+++++++.+.+..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 46778899999999999999964 7899999999754322 223566899999999999999999999999999999999
Q ss_pred CCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 754 MKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 754 ~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
++ |+|.+++..... .+++..++.++.||+.||+|||+
T Consensus 82 ~~-~~l~~~~~~~~~--------~~~~~~~~~~~~qi~~aL~~LH~ 118 (324)
T 3mtl_A 82 LD-KDLKQYLDDCGN--------IINMHNVKLFLFQLLRGLAYCHR 118 (324)
T ss_dssp CS-EEHHHHHHHTTT--------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cc-cCHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 98 599999876542 47788899999999999999994
No 322
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=99.44 E-value=1.6e-13 Score=152.24 Aligned_cols=112 Identities=18% Similarity=0.230 Sum_probs=92.2
Q ss_pred cCCCCC-CeecccCCeeEEEEEe-CCCcEEEEEEccccChhhHHHHHHHHHHHHh-CCCCcccceeEEEEE----CCEEE
Q 003737 676 NNFDPA-NKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSRQGNREFVNEIGMISA-QQHPNLVKLYGCCVE----GNQLL 748 (799)
Q Consensus 676 ~~f~~~-~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~-l~H~niv~l~g~~~~----~~~~~ 748 (799)
++|... +.||+|+||+||++.. .+|+.||||+++.. ..+.+|++++.+ .+||||+++++++.. .+..|
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~ 135 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 135 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEE
Confidence 345544 6899999999999995 47899999999632 457788888754 589999999999876 56789
Q ss_pred EEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 749 LVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 749 lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
+|||||++|+|.+++...... .+++..+..++.||+.||+|||+
T Consensus 136 lv~E~~~gg~L~~~l~~~~~~-------~l~~~~~~~i~~qi~~aL~~LH~ 179 (400)
T 1nxk_A 136 IVMECLDGGELFSRIQDRGDQ-------AFTEREASEIMKSIGEAIQYLHS 179 (400)
T ss_dssp EEEECCCSEEHHHHHHCC----------CCBHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCcHHHHHHHhCCC-------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999865422 57888999999999999999994
No 323
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=99.44 E-value=1.4e-13 Score=149.63 Aligned_cols=117 Identities=21% Similarity=0.418 Sum_probs=93.9
Q ss_pred hhcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccChh-----hHHHHHHHHHHHHhCCCCcccceeEEEEECCEE
Q 003737 674 ATNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSRQ-----GNREFVNEIGMISAQQHPNLVKLYGCCVEGNQL 747 (799)
Q Consensus 674 ~t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~-----~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~ 747 (799)
..++|...+.||+|+||.||+|.. .+|+.||||++...... ..+.+.+|++++.+++||||+++++++.+.+..
T Consensus 8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (346)
T 1ua2_A 8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNI 87 (346)
T ss_dssp -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCC
T ss_pred HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCce
Confidence 456788999999999999999995 46899999999754221 124788999999999999999999999999999
Q ss_pred EEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 748 LLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 748 ~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
++||||+++ +|.+++..... .+++..+..++.|+++||+|||+
T Consensus 88 ~lv~e~~~~-~l~~~~~~~~~--------~~~~~~~~~~~~qi~~~l~~lH~ 130 (346)
T 1ua2_A 88 SLVFDFMET-DLEVIIKDNSL--------VLTPSHIKAYMLMTLQGLEYLHQ 130 (346)
T ss_dssp EEEEECCSE-EHHHHHTTCCS--------SCCSSHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEcCCC-CHHHHHHhcCc--------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999986 89998876532 46677889999999999999994
No 324
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=99.43 E-value=9.1e-14 Score=145.91 Aligned_cols=115 Identities=23% Similarity=0.402 Sum_probs=96.6
Q ss_pred hcCCCCCCeecccCCeeEEEEEeCCCcEEEEEEccccChhhHHHHHHHHHHHHhCCCCcccceeEEEEEC-CEEEEEEec
Q 003737 675 TNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEG-NQLLLVYEY 753 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~-~~~~lV~Ey 753 (799)
.++|+..+.||+|+||.||++.. +|+.||||+++... ..+.|.+|++++.+++||||+++++++.+. +..++||||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 96 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 96 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred hhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence 35677889999999999999987 48899999997543 456899999999999999999999997654 468999999
Q ss_pred CCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 754 MKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 754 ~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
+++|+|.+++...... .+++..+..++.|+++||+|||+
T Consensus 97 ~~~~~L~~~l~~~~~~-------~~~~~~~~~~~~~i~~~l~~lH~ 135 (278)
T 1byg_A 97 MAKGSLVDYLRSRGRS-------VLGGDCLLKFSLDVCEAMEYLEG 135 (278)
T ss_dssp CTTEEHHHHHHHHHHH-------HCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHhcccc-------cCCHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999764321 36777888999999999999994
No 325
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=99.43 E-value=2.2e-13 Score=143.15 Aligned_cols=117 Identities=20% Similarity=0.334 Sum_probs=97.7
Q ss_pred hhcCCCCCCeecccCCeeEEEEEeCC----CcEEEEEEcccc-ChhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEE
Q 003737 674 ATNNFDPANKVGEGGFGSVYKGILSD----GTVIAVKQLSSK-SRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLL 748 (799)
Q Consensus 674 ~t~~f~~~~~lG~G~~g~Vy~~~~~~----g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 748 (799)
..++|...+.||+|+||.||+|.... +..||||.+... .....+.|.+|++++.+++||||+++++++.+ +..+
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~ 88 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTW 88 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCE
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCE
Confidence 34567888999999999999998532 346999999765 33456789999999999999999999999764 4568
Q ss_pred EEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 749 LVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 749 lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
+||||+++|+|.+++..... .+++..+..++.|+++||+|||+
T Consensus 89 ~v~e~~~~~~L~~~l~~~~~--------~~~~~~~~~~~~~i~~~l~~lH~ 131 (281)
T 3cc6_A 89 IIMELYPYGELGHYLERNKN--------SLKVLTLVLYSLQICKAMAYLES 131 (281)
T ss_dssp EEEECCTTCBHHHHHHHHTT--------TCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCCCCCHHHHHHhccc--------cCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999975432 47788899999999999999994
No 326
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=99.43 E-value=4.4e-13 Score=144.63 Aligned_cols=114 Identities=19% Similarity=0.374 Sum_probs=96.4
Q ss_pred HHhhcCCCCCCeecccCCeeEEEEEeCCCcEEEEEEccccChhhHHHHHHHHHHHHhC--CCCcccceeEEEEEC----C
Q 003737 672 KAATNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQ--QHPNLVKLYGCCVEG----N 745 (799)
Q Consensus 672 ~~~t~~f~~~~~lG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l--~H~niv~l~g~~~~~----~ 745 (799)
....++|+..+.||+|+||.||+|+.. |+.||||++... ....+.+|.+++... +||||+++++++... +
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 108 (337)
T 3mdy_A 33 RTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWT 108 (337)
T ss_dssp TTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGC
T ss_pred cccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCC
Confidence 344567999999999999999999975 899999998543 234566677766655 899999999999987 7
Q ss_pred EEEEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 746 QLLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 746 ~~~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
..++||||+++|+|.++++.. .+++..+..++.|++.||+|||+
T Consensus 109 ~~~lv~e~~~~g~L~~~l~~~----------~~~~~~~~~i~~~i~~~l~~lH~ 152 (337)
T 3mdy_A 109 QLYLITDYHENGSLYDYLKST----------TLDAKSMLKLAYSSVSGLCHLHT 152 (337)
T ss_dssp EEEEEECCCTTCBHHHHHHHC----------CBCHHHHHHHHHHHHHHHHHHHS
T ss_pred ceEEEEeccCCCcHHHHhhcc----------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999754 46778899999999999999995
No 327
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.43 E-value=6.5e-13 Score=128.75 Aligned_cols=88 Identities=23% Similarity=0.261 Sum_probs=51.5
Q ss_pred CCCCEEEeeCCcCCCCCCccccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccCCcCCCcCCccccCCCCCCEEEc
Q 003737 163 TTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHI 242 (799)
Q Consensus 163 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 242 (799)
++|++|+|++|++++..|..|.++++|++|+|++|++++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|
T Consensus 30 ~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 109 (170)
T 3g39_A 30 TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWL 109 (170)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEe
Confidence 45555666666555555555555666666666666665444444556666666666666666554555666666666666
Q ss_pred cCCCCCCC
Q 003737 243 QGSSLEGP 250 (799)
Q Consensus 243 ~~N~l~~~ 250 (799)
++|.++..
T Consensus 110 ~~N~~~c~ 117 (170)
T 3g39_A 110 LNNPWDCA 117 (170)
T ss_dssp CSSCBCTT
T ss_pred CCCCCCCC
Confidence 66666543
No 328
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=99.43 E-value=1.3e-13 Score=151.20 Aligned_cols=114 Identities=18% Similarity=0.352 Sum_probs=91.9
Q ss_pred hcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEcccc--ChhhHHHHHHHHHHHHhCCCCcccceeEEEEECC------
Q 003737 675 TNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSK--SRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGN------ 745 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~------ 745 (799)
.+.|...+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|++++++++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 45688889999999999999995 57999999999653 2334568999999999999999999999997653
Q ss_pred EEEEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 746 QLLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 746 ~~~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
..|+||||| +++|.+++... .+++..++.++.||++||+|||+
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~----------~l~~~~~~~~~~qi~~~L~~LH~ 146 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKHE----------KLGEDRIQFLVYQMLKGLRYIHA 146 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHHC----------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEecC-CCCHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 469999999 78999998753 46788999999999999999994
No 329
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=99.43 E-value=3.2e-13 Score=144.05 Aligned_cols=118 Identities=25% Similarity=0.442 Sum_probs=95.5
Q ss_pred hhcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccC-----hhhHHHHHHHHHHHHhCC---CCcccceeEEEEEC
Q 003737 674 ATNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKS-----RQGNREFVNEIGMISAQQ---HPNLVKLYGCCVEG 744 (799)
Q Consensus 674 ~t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~-----~~~~~~f~~E~~~l~~l~---H~niv~l~g~~~~~ 744 (799)
.+++|+..+.||+|+||.||+|.. .+|+.||||++.... ......+.+|++++.+++ ||||++++++|...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 457899999999999999999994 578999999986432 112356778888777664 99999999999876
Q ss_pred C-----EEEEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 745 N-----QLLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 745 ~-----~~~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
. ..++||||++ |+|.+++...... .+++..+..++.||++||+|||+
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~-------~~~~~~~~~i~~qi~~al~~lH~ 138 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPP-------GLPAETIKDLMRQFLRGLDFLHA 138 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCTT-------CSCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccCC-------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 5 5799999998 5999999865422 47888999999999999999994
No 330
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=99.42 E-value=2.9e-13 Score=149.54 Aligned_cols=115 Identities=23% Similarity=0.418 Sum_probs=91.2
Q ss_pred hhcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEcccc--ChhhHHHHHHHHHHHHhCC-CCcccceeEEEEECC--EE
Q 003737 674 ATNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSK--SRQGNREFVNEIGMISAQQ-HPNLVKLYGCCVEGN--QL 747 (799)
Q Consensus 674 ~t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~--~~ 747 (799)
..++|+..+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|+.++.+++ |||||++++++...+ ..
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 456788999999999999999984 57899999998653 3344567889999999997 999999999998654 68
Q ss_pred EEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 748 LLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 748 ~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
|+|||||+ |+|.++++.. .+++..++.++.||++||+|||+
T Consensus 87 ~lv~e~~~-~~L~~~~~~~----------~~~~~~~~~i~~qi~~~L~~LH~ 127 (388)
T 3oz6_A 87 YLVFDYME-TDLHAVIRAN----------ILEPVHKQYVVYQLIKVIKYLHS 127 (388)
T ss_dssp EEEEECCS-EEHHHHHHHT----------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecccC-cCHHHHHHcC----------CCCHHHHHHHHHHHHHHHHHHHh
Confidence 99999998 6999998753 46778889999999999999994
No 331
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=99.42 E-value=2.5e-13 Score=143.48 Aligned_cols=115 Identities=23% Similarity=0.433 Sum_probs=95.9
Q ss_pred hhcCCCCCCeecccCCeeEEEEEeCCCcEEEEEEccccC--hhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEE
Q 003737 674 ATNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 751 (799)
Q Consensus 674 ~t~~f~~~~~lG~G~~g~Vy~~~~~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 751 (799)
..++|...+.||+|+||.||+|+.. ..||||.++... ....+.|.+|++++.+++|+||+++++++ ..+..++||
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~ 98 (289)
T 3og7_A 22 PDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVT 98 (289)
T ss_dssp CTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEE
T ss_pred CccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEE
Confidence 4466888899999999999999854 359999996543 34457899999999999999999999965 556689999
Q ss_pred ecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 752 EYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 752 Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
||+++|+|.++++.... .+++..+..++.|+++||+|||+
T Consensus 99 e~~~~~~L~~~l~~~~~--------~~~~~~~~~i~~qi~~~L~~lH~ 138 (289)
T 3og7_A 99 QWCEGSSLYHHLHASET--------KFEMKKLIDIARQTARGMDYLHA 138 (289)
T ss_dssp ECCCEEEHHHHHTTC-----------CCHHHHHHHHHHHHHHHHHHHH
T ss_pred EecCCCcHHHHHhhccC--------CCCHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999975432 57788899999999999999994
No 332
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.42 E-value=3.1e-13 Score=143.55 Aligned_cols=112 Identities=19% Similarity=0.251 Sum_probs=94.6
Q ss_pred cCCCCC-CeecccCCeeEEEEEe-CCCcEEEEEEccccChhhHHHHHHHHHHH-HhCCCCcccceeEEEEE----CCEEE
Q 003737 676 NNFDPA-NKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSRQGNREFVNEIGMI-SAQQHPNLVKLYGCCVE----GNQLL 748 (799)
Q Consensus 676 ~~f~~~-~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l-~~l~H~niv~l~g~~~~----~~~~~ 748 (799)
++|... +.||+|+||.||++.. .+++.||+|+++. ...+.+|++++ ...+||||+++++++.. ....+
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 91 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 91 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEE
Confidence 445555 7799999999999995 5789999999864 24677888887 55699999999999987 66789
Q ss_pred EEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 749 LVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 749 lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
+||||+++|+|.+++...... .+++..+..++.|++.||+|||+
T Consensus 92 lv~e~~~~~~L~~~l~~~~~~-------~~~~~~~~~i~~qi~~~l~~lH~ 135 (299)
T 3m2w_A 92 IVMECLDGGELFSRIQDRGDQ-------AFTEREASEIMKSIGEAIQYLHS 135 (299)
T ss_dssp EEECCCCSCBHHHHHHHCTTC-------CCBHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeecCCCcHHHHHHhccCC-------CCCHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999865422 57888999999999999999994
No 333
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.42 E-value=1.7e-13 Score=162.01 Aligned_cols=117 Identities=21% Similarity=0.236 Sum_probs=101.9
Q ss_pred hhcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEcccc---ChhhHHHHHHHHHHHHhC-CCCcccceeEEEEECCEEE
Q 003737 674 ATNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSK---SRQGNREFVNEIGMISAQ-QHPNLVKLYGCCVEGNQLL 748 (799)
Q Consensus 674 ~t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~---~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~ 748 (799)
..++|+..+.||+|+||.||+|+. .+++.||||+++.. .....+.+.+|.+++..+ +|++|+++++++.+.+..|
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 346788899999999999999995 46889999999753 223456788999999987 7999999999999999999
Q ss_pred EEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 749 LVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 749 lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
+||||+++|+|.++++..+ .+++..++.|+.||+.||+|||+
T Consensus 419 lV~E~~~gg~L~~~l~~~~---------~~~~~~~~~~~~qi~~aL~~LH~ 460 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQVG---------RFKEPHAVFYAAEIAIGLFFLQS 460 (674)
T ss_dssp EEEECCCSCBHHHHHHHHS---------SCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCcCCCcHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999998654 57888999999999999999994
No 334
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.42 E-value=1.6e-15 Score=151.21 Aligned_cols=155 Identities=21% Similarity=0.282 Sum_probs=100.7
Q ss_pred cCCCCCCCEEEeeCCcCCCCCCc------cccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccCCcCCCcCCcccc
Q 003737 159 LTNITTLKNLSIEGNLFTGSIPP------DIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIG 232 (799)
Q Consensus 159 ~~~L~~L~~L~Ls~N~l~~~~p~------~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 232 (799)
+.....++.++++.+.+++.+|. .+..+++|++|++++|.+++ +| .+..+++|++|++++|.++ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 34455667777777777766665 67777777777777777775 56 6777777777777777776 5666666
Q ss_pred CCCCCCEEEccCCCCCCCCchhhhcCCCCCeEEcCCCCCCCCCCCccCCCCccEEEccCCcCcccCC-ccccCCCCCCee
Q 003737 233 KWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIP-DYIGDMTKLKNI 311 (799)
Q Consensus 233 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~l~~~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L 311 (799)
.+++|++|+|++|++++ +| .+..+++|+ .|++++|.+++..+ ..+..+++|++|
T Consensus 91 ~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~-----------------------~L~l~~N~i~~~~~~~~l~~l~~L~~L 145 (198)
T 1ds9_A 91 VADTLEELWISYNQIAS-LS-GIEKLVNLR-----------------------VLYMSNNKITNWGEIDKLAALDKLEDL 145 (198)
T ss_dssp HHHHCSEEEEEEEECCC-HH-HHHHHHHSS-----------------------EEEESEEECCCHHHHHHHTTTTTCSEE
T ss_pred cCCcCCEEECcCCcCCc-CC-ccccCCCCC-----------------------EEECCCCcCCchhHHHHHhcCCCCCEE
Confidence 66777777777777764 33 344444444 44444455543221 356667777777
Q ss_pred ccccccCCCCCch----------hhhccCCCCEEeccCCcCC
Q 003737 312 DLSFNNLTGGIPT----------TFEKLAKTNFMYLTGNKLT 343 (799)
Q Consensus 312 ~Ls~N~l~~~~p~----------~~~~l~~L~~L~L~~N~l~ 343 (799)
++++|.+++.+|. .+..+++|+.|+ +|.++
T Consensus 146 ~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 146 LLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp EECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred EecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 7777777665554 266777777765 55554
No 335
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=99.42 E-value=9.8e-14 Score=149.38 Aligned_cols=115 Identities=23% Similarity=0.378 Sum_probs=94.3
Q ss_pred cCCCCCCeecccCCeeEEEEEe-CCCcE----EEEEEccccC-hhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEE
Q 003737 676 NNFDPANKVGEGGFGSVYKGIL-SDGTV----IAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLL 749 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~-~~g~~----vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 749 (799)
++|...+.||+|+||.||+|.. .+++. ||+|.+.... ....+.+.+|+.++.+++||||++++++|. ++..++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence 4577789999999999999995 44543 7888875432 233457889999999999999999999986 456899
Q ss_pred EEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 750 VYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 750 V~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
||||+++|+|.+++..... .+++..+..++.||++||+|||+
T Consensus 92 v~e~~~~~~L~~~l~~~~~--------~~~~~~~~~~~~qi~~~l~~lH~ 133 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQHRG--------ALGPQLLLNWGVQIAKGMYYLEE 133 (325)
T ss_dssp EEECCTTCBSHHHHHSSGG--------GSCTTHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCCHHHHHHHccc--------cCCHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999986532 45677888899999999999994
No 336
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=99.42 E-value=8.1e-13 Score=142.94 Aligned_cols=113 Identities=24% Similarity=0.390 Sum_probs=98.4
Q ss_pred HHhhcCCCCCCeecccCCeeEEEEEeCCCcEEEEEEccccChhhHHHHHHHHHHHHh--CCCCcccceeEEEEECC----
Q 003737 672 KAATNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISA--QQHPNLVKLYGCCVEGN---- 745 (799)
Q Consensus 672 ~~~t~~f~~~~~lG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~--l~H~niv~l~g~~~~~~---- 745 (799)
....++|...+.||+|+||.||+|+. +|+.||||++... ..+.+.+|++++.. ++||||+++++++...+
T Consensus 38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~ 113 (342)
T 1b6c_B 38 RTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT 113 (342)
T ss_dssp HHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCC
T ss_pred ccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccc
Confidence 34556799999999999999999997 5899999999643 34678899999887 79999999999998876
Q ss_pred EEEEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhc
Q 003737 746 QLLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFF 798 (799)
Q Consensus 746 ~~~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH 798 (799)
..++||||+++|+|.+++.+. .+++..+..++.|++.||+|||
T Consensus 114 ~~~lv~e~~~~g~L~~~l~~~----------~~~~~~~~~i~~~i~~~l~~lH 156 (342)
T 1b6c_B 114 QLWLVSDYHEHGSLFDYLNRY----------TVTVEGMIKLALSTASGLAHLH 156 (342)
T ss_dssp CEEEEECCCTTCBHHHHHHHC----------CBCHHHHHHHHHHHHHHHHHHH
T ss_pred eeEEEEeecCCCcHHHHHhcc----------CccHHHHHHHHHHHHHHHHHHH
Confidence 789999999999999999753 4667788889999999999999
No 337
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.42 E-value=6.2e-14 Score=151.31 Aligned_cols=259 Identities=16% Similarity=0.089 Sum_probs=174.7
Q ss_pred ccCCcccc--CCCCCCEEEccCCcCCCcCcccccc-cc-eeEEEccCCcCc--CcCCcccCCCCCCCEEEeeCCcCCCCC
Q 003737 106 GTLPTELS--KLRYLKQLDLSRNCLTGSFSPQWAS-LQ-LVELSVMGNRLS--GPFPKVLTNITTLKNLSIEGNLFTGSI 179 (799)
Q Consensus 106 g~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~-l~-L~~L~Ls~N~l~--~~~p~~~~~L~~L~~L~Ls~N~l~~~~ 179 (799)
|.++..+. .+.+|+.|+++++ +....-..+.. +. |++|||++|++. ...+..+ +.++.+.+..|.+.
T Consensus 13 g~l~~~l~~~~~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~~---~~~~~~~~~~~~I~--- 85 (329)
T 3sb4_A 13 GTLISMMTEEEANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGTY---PNGKFYIYMANFVP--- 85 (329)
T ss_dssp TCGGGGSCHHHHHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSSS---GGGCCEEECTTEEC---
T ss_pred CcHHhhccchhhCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCccccc---cccccccccccccC---
Confidence 33444333 3678999999875 22111122333 44 999999999987 3332222 33566777776432
Q ss_pred CccccC--------CCCCCEEEcccCcCCccCChhccCCCCCCEEEccCCcCCCcCCccccCCCCCCEEEccCCC----C
Q 003737 180 PPDIRK--------LINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSS----L 247 (799)
Q Consensus 180 p~~~~~--------l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~----l 247 (799)
+..|.+ +++|+.|+|.+ .++..-+.+|.++++|+.|++++|.+....+..|..+.++..+.+..+. .
T Consensus 86 ~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~ 164 (329)
T 3sb4_A 86 AYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFK 164 (329)
T ss_dssp TTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTS
T ss_pred HHHhcccccccccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcc
Confidence 346777 99999999999 8886667789999999999999999987888889888888777765521 1
Q ss_pred CCCCchhhhcCCCCC--------------------------eEEcCCCCCCCCCCCccC--CCCccEEEccCCcCcccCC
Q 003737 248 EGPIPASISALTSLT--------------------------DLRISDLKGSESAFPKLD--KMNLKTLILTKCLIHGEIP 299 (799)
Q Consensus 248 ~~~~p~~~~~l~~L~--------------------------~L~L~~n~~~~~~~~~l~--~~~L~~L~L~~N~l~~~~p 299 (799)
.......|.++..|+ .+.+.+ ......+..+. ..+|+.++|++|+++...+
T Consensus 165 ~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~-~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~ 243 (329)
T 3sb4_A 165 NRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEG-KLDNADFKLIRDYMPNLVSLDISKTNATTIPD 243 (329)
T ss_dssp TTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEE-CCCHHHHHHHHHHCTTCCEEECTTBCCCEECT
T ss_pred ccccccccccccccceeEEecCCCcHHHHHhhcccCccccceEEEee-eecHHHHHHHHHhcCCCeEEECCCCCcceecH
Confidence 222223344444444 222222 11111111111 2589999999999997777
Q ss_pred ccccCCCCCCeeccccccCCCCCchhhhccCCCC-EEeccCCcCCCcCChhhhc---CCCEEEeecCcCcccCCCCC-cC
Q 003737 300 DYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTN-FMYLTGNKLTGPVPKYIFN---SNKNVDISLNNFTWESSDPI-EC 374 (799)
Q Consensus 300 ~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~-~L~L~~N~l~g~~p~~~~~---~l~~l~ls~N~~~g~~p~~~-~~ 374 (799)
..|.++++|+.|+|.+| ++...+.+|.++++|+ .+++.+ +++ .|++..|. .++.++++.|+++...+..+ .|
T Consensus 244 ~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~-~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~ 320 (329)
T 3sb4_A 244 FTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVT-AIEFGAFMGCDNLRYVLATGDKITTLGDELFGNG 320 (329)
T ss_dssp TTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCC-EECTTTTTTCTTEEEEEECSSCCCEECTTTTCTT
T ss_pred hhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cce-EEchhhhhCCccCCEEEeCCCccCccchhhhcCC
Confidence 78999999999999998 8777778899999999 999988 776 45554443 56899999998886655544 45
Q ss_pred CC
Q 003737 375 PR 376 (799)
Q Consensus 375 ~~ 376 (799)
..
T Consensus 321 ~~ 322 (329)
T 3sb4_A 321 VP 322 (329)
T ss_dssp CC
T ss_pred cc
Confidence 43
No 338
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.41 E-value=4.2e-12 Score=140.39 Aligned_cols=238 Identities=11% Similarity=0.072 Sum_probs=103.3
Q ss_pred CCCCEEEccCCcCCCcCcccccccceeEEEccCCcCcCcCCcccCCCCCCCEEEeeCCcCCCCCCccccCCCCCCEEEcc
Q 003737 116 RYLKQLDLSRNCLTGSFSPQWASLQLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILS 195 (799)
Q Consensus 116 ~~L~~L~Ls~N~l~~~~p~~~~~l~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 195 (799)
..++.+.+.. .++.+....|...+|+.+.+..+ ++.+-...|.+. +|+.+.+.. .++..-+..|.++++|+.++++
T Consensus 113 ~~l~~i~ip~-~i~~I~~~aF~~~~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~ 188 (401)
T 4fdw_A 113 KGYNEIILPN-SVKSIPKDAFRNSQIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLS 188 (401)
T ss_dssp SSCSEEECCT-TCCEECTTTTTTCCCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEECT
T ss_pred CCccEEEECC-ccCEehHhhcccCCccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeecC
Confidence 3444444432 23333344444434445544433 333333444442 355555443 3332333344455555555555
Q ss_pred cCcCCccCChhccCCCCCCEEEccCCcCCCcCCccccCCCCCCEEEccCCCCCCCCchhhhcCCCCCeEEcCCCCCCCCC
Q 003737 196 SNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESA 275 (799)
Q Consensus 196 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~~~~~~ 275 (799)
+|.++..-...|. ..+|+.+.+..+ ++..-...|.++++|+.+++..| ++..-...|.+ .+|+.+.+.+ +.....
T Consensus 189 ~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp~-~i~~I~ 263 (401)
T 4fdw_A 189 KTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLPN-GVTNIA 263 (401)
T ss_dssp TSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEET-TCCEEC
T ss_pred CCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeCC-CccEEC
Confidence 5444422222222 344555555422 33333444444555555555432 23223333333 4455544432 221111
Q ss_pred CCccCC-CCccEEEccCCcCc-----ccCCccccCCCCCCeeccccccCCCCCchhhhccCCCCEEeccCCcCCCcCChh
Q 003737 276 FPKLDK-MNLKTLILTKCLIH-----GEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKY 349 (799)
Q Consensus 276 ~~~l~~-~~L~~L~L~~N~l~-----~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~ 349 (799)
-..|.. .+|+.+++.+|.+. ...+..|.++++|+.++|. |.++..-..+|.++++|+.++|..| ++ .++..
T Consensus 264 ~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~-~I~~~ 340 (401)
T 4fdw_A 264 SRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VT-QINFS 340 (401)
T ss_dssp TTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CC-EECTT
T ss_pred hhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-cc-EEcHH
Confidence 112333 34555555444433 2333445556666666665 3355444455556666666666433 33 23332
Q ss_pred hhc--CCCEEEeecCcCc
Q 003737 350 IFN--SNKNVDISLNNFT 365 (799)
Q Consensus 350 ~~~--~l~~l~ls~N~~~ 365 (799)
.|. .++.++++.|.+.
T Consensus 341 aF~~~~L~~l~l~~n~~~ 358 (401)
T 4fdw_A 341 AFNNTGIKEVKVEGTTPP 358 (401)
T ss_dssp SSSSSCCCEEEECCSSCC
T ss_pred hCCCCCCCEEEEcCCCCc
Confidence 221 3555666655443
No 339
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=99.41 E-value=4e-13 Score=144.71 Aligned_cols=109 Identities=18% Similarity=0.374 Sum_probs=96.1
Q ss_pred cCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccChhhHHHHHHHHHHHHhCC-CCcccceeEEEEE--CCEEEEEE
Q 003737 676 NNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQ-HPNLVKLYGCCVE--GNQLLLVY 751 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~--~~~~~lV~ 751 (799)
++|+..+.||+|+||.||+|.. .+++.||||+++.. ..+.+.+|++++.+++ ||||+++++++.+ ....++||
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~ 112 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF 112 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence 5678889999999999999984 67899999999743 3467999999999997 9999999999988 66789999
Q ss_pred ecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 752 EYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 752 Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
||+++|+|.+++. .+++..+..++.||++||+|||+
T Consensus 113 e~~~~~~l~~~~~------------~~~~~~~~~~~~qi~~~l~~lH~ 148 (330)
T 3nsz_A 113 EHVNNTDFKQLYQ------------TLTDYDIRFYMYEILKALDYCHS 148 (330)
T ss_dssp ECCCCCCHHHHGG------------GCCHHHHHHHHHHHHHHHHHHHH
T ss_pred eccCchhHHHHHH------------hCCHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999874 35677899999999999999994
No 340
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=99.41 E-value=3.4e-13 Score=148.65 Aligned_cols=118 Identities=20% Similarity=0.347 Sum_probs=92.9
Q ss_pred HHhhcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccChhhHHHHHHHHHHHHhCCCCcccceeEEEEEC------
Q 003737 672 KAATNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEG------ 744 (799)
Q Consensus 672 ~~~t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~------ 744 (799)
+...++|...+.||+|+||.||+|.. .+|+.||||++..... ...+|++++++++|||||++++++...
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 78 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK 78 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence 34567889999999999999999984 6799999999865422 234799999999999999999998543
Q ss_pred --------------------------------CEEEEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHH
Q 003737 745 --------------------------------NQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAAN 792 (799)
Q Consensus 745 --------------------------------~~~~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~ 792 (799)
...++||||++ |+|.+.+...... ...+++..++.++.||++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~-----~~~l~~~~~~~i~~qi~~ 152 (383)
T 3eb0_A 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRS-----GRSIPMNLISIYIYQLFR 152 (383)
T ss_dssp -------------------------------CCEEEEEECCCS-EEHHHHHHHHHHT-----TCCCCHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhc-----CCCCCHHHHHHHHHHHHH
Confidence 34889999998 5888887642110 116788899999999999
Q ss_pred HHhhhcC
Q 003737 793 NIDFFFF 799 (799)
Q Consensus 793 gL~yLH~ 799 (799)
||+|||+
T Consensus 153 aL~~LH~ 159 (383)
T 3eb0_A 153 AVGFIHS 159 (383)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
Confidence 9999995
No 341
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=99.41 E-value=3.9e-13 Score=143.46 Aligned_cols=114 Identities=21% Similarity=0.382 Sum_probs=96.2
Q ss_pred hcCCCCCCeecccCCeeEEEEEeCCCcEEEEEEcccc--ChhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEEEe
Q 003737 675 TNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSK--SRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYE 752 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 752 (799)
.++|...+.||+|+||.||+|... ..+|+|.++.. .....+.|.+|++++.+++||||+++++++. .+..++|||
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e 111 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEe
Confidence 356888899999999999999854 36899988754 2334578999999999999999999999874 556899999
Q ss_pred cCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 753 YMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 753 y~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
|+++|+|.++++.... .+++..+..++.||++||+|||+
T Consensus 112 ~~~~~~L~~~l~~~~~--------~~~~~~~~~i~~qi~~~L~~LH~ 150 (307)
T 3lb7_A 112 WCEGSSLYKHLHVQET--------KFQMFQLIDIARQTAQGMDYLHA 150 (307)
T ss_dssp CCSSCBHHHHHHTSCC--------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCcHHHHHHhccc--------CCCHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999975432 57788899999999999999994
No 342
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=99.41 E-value=3.4e-13 Score=145.29 Aligned_cols=115 Identities=23% Similarity=0.483 Sum_probs=96.9
Q ss_pred cCCCCCCeecccCCeeEEEEEe-CCCc----EEEEEEcccc-ChhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEE
Q 003737 676 NNFDPANKVGEGGFGSVYKGIL-SDGT----VIAVKQLSSK-SRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLL 749 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~-~~g~----~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 749 (799)
++|+..+.||+|+||.||+|.. .+++ .||+|.+... .....+.+.+|++++.+++||||+++++++...+ .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~ 93 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEE
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceE
Confidence 5688889999999999999994 3454 3578877544 3345678999999999999999999999998755 789
Q ss_pred EEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 750 VYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 750 V~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
|+||+++|+|.+++..... .+++..+..++.||++||+|||+
T Consensus 94 v~~~~~~g~L~~~l~~~~~--------~~~~~~~~~i~~qi~~aL~~LH~ 135 (327)
T 3lzb_A 94 ITQLMPFGCLLDYVREHKD--------NIGSQYLLNWCVQIAKGMNYLED 135 (327)
T ss_dssp EECCCSSCBHHHHHHHTTT--------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCCCcHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999986532 57788899999999999999994
No 343
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=99.41 E-value=6e-13 Score=144.06 Aligned_cols=120 Identities=18% Similarity=0.368 Sum_probs=97.8
Q ss_pred hhcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccC-hhhHHHHHHHHHH-HHhCCCCcccceeEEEEECCEEEEE
Q 003737 674 ATNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKS-RQGNREFVNEIGM-ISAQQHPNLVKLYGCCVEGNQLLLV 750 (799)
Q Consensus 674 ~t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~f~~E~~~-l~~l~H~niv~l~g~~~~~~~~~lV 750 (799)
..++|+..+.||+|+||.||+|.. .+|+.||||+++... .....++..|+.. +..++||||+++++++.+.+..++|
T Consensus 49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 128 (340)
T 3an0_A 49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 128 (340)
T ss_dssp CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEE
T ss_pred ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEE
Confidence 345677889999999999999995 579999999997652 3344566677666 7778999999999999999999999
Q ss_pred EecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 751 YEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 751 ~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
|||+++ +|.+++...... ...+++..+..++.||+.||+|||+
T Consensus 129 ~e~~~~-~L~~~l~~~~~~-----~~~l~~~~~~~i~~qi~~~l~~lH~ 171 (340)
T 3an0_A 129 MELMDT-SLDKFYKQVIDK-----GQTIPEDILGKIAVSIVKALEHLHS 171 (340)
T ss_dssp ECCCSE-EHHHHHHHHHHT-----SCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhC-cHHHHHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 999985 999988742110 1167888999999999999999994
No 344
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=99.41 E-value=4.6e-13 Score=145.66 Aligned_cols=115 Identities=21% Similarity=0.390 Sum_probs=96.9
Q ss_pred cCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccC--hhhHHHHHHHHHHHHhCCCCcccceeEEEEE--------C
Q 003737 676 NNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVE--------G 744 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~--------~ 744 (799)
++|+..+.||+|+||.||+|.. .+|+.||||++.... ......+.+|++++.+++||||+++++++.. .
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 96 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence 5688889999999999999996 578999999986543 2234678899999999999999999999987 3
Q ss_pred CEEEEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 745 NQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 745 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
+..++||||+++ +|.+.+..... .+++..+..++.||+.||+|||+
T Consensus 97 ~~~~lv~e~~~~-~l~~~l~~~~~--------~~~~~~~~~i~~qi~~~l~~LH~ 142 (351)
T 3mi9_A 97 GSIYLVFDFCEH-DLAGLLSNVLV--------KFTLSEIKRVMQMLLNGLYYIHR 142 (351)
T ss_dssp CEEEEEEECCSE-EHHHHHHCTTS--------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEeccCC-CHHHHHhhccC--------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 468999999985 88888765432 57888999999999999999994
No 345
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=99.41 E-value=5.4e-13 Score=141.25 Aligned_cols=114 Identities=16% Similarity=0.234 Sum_probs=99.5
Q ss_pred hcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccChhhHHHHHHHHHHHHhC-CCCcccceeEEEEECCEEEEEEe
Q 003737 675 TNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSRQGNREFVNEIGMISAQ-QHPNLVKLYGCCVEGNQLLLVYE 752 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~E 752 (799)
.++|...+.||+|+||.||+|.. .+|+.||||++.... ..+.+.+|++++.++ +|++++++++++.+....++|||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e 86 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID 86 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence 35688889999999999999994 678999999986432 234688999999999 79999999999999999999999
Q ss_pred cCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 753 YMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 753 y~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
|+ +|+|.+++..... .+++..+..++.||++||+|||+
T Consensus 87 ~~-~~~L~~~l~~~~~--------~~~~~~~~~i~~qi~~~l~~lH~ 124 (298)
T 1csn_A 87 LL-GPSLEDLLDLCGR--------KFSVKTVAMAAKQMLARVQSIHE 124 (298)
T ss_dssp CC-CCBHHHHHHHTTT--------CCCHHHHHHHHHHHHHHHHHHHT
T ss_pred ec-CCCHHHHHHHhcc--------CCCHHHHHHHHHHHHHHHHHHHh
Confidence 99 9999999986532 47788999999999999999995
No 346
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.41 E-value=6.8e-13 Score=128.61 Aligned_cols=105 Identities=23% Similarity=0.310 Sum_probs=58.2
Q ss_pred EEEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCcCcccccccceeEEEccCCcCcCcCCcccCCCCCCCEEEeeCCc
Q 003737 95 VTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNL 174 (799)
Q Consensus 95 ~~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~ 174 (799)
+.++++++.++ .+|..+. ++|++|+|++|++++. .|..|.++++|++|+|++|+
T Consensus 12 ~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~-----------------------~~~~~~~l~~L~~L~Ls~N~ 65 (170)
T 3g39_A 12 TTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKL-----------------------EPGVFDRLTQLTRLDLDNNQ 65 (170)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCC-----------------------CTTTTTTCTTCSEEECCSSC
T ss_pred CEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCcc-----------------------ChhhhcCcccCCEEECCCCC
Confidence 45677777766 3554442 5555666555555544 44555555555555555555
Q ss_pred CCCCCCccccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccCCcCCC
Q 003737 175 FTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSG 225 (799)
Q Consensus 175 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 225 (799)
+++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|.+..
T Consensus 66 l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 66 LTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCT
T ss_pred cCccChhhccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEeCCCCCCC
Confidence 554444445555555555555555554444445555555566666555543
No 347
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.40 E-value=1.2e-13 Score=147.50 Aligned_cols=119 Identities=19% Similarity=0.285 Sum_probs=92.7
Q ss_pred HHhhcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccChh------hHHHHHHHHHHHHhC----CCCcccceeEE
Q 003737 672 KAATNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSRQ------GNREFVNEIGMISAQ----QHPNLVKLYGC 740 (799)
Q Consensus 672 ~~~t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~------~~~~f~~E~~~l~~l----~H~niv~l~g~ 740 (799)
....++|...+.||+|+||.||+|.. .+++.||||++...... ....+.+|++++.++ +|+||++++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 33456799999999999999999984 57899999999654321 223567899999988 89999999999
Q ss_pred EEECCEEEEEEec-CCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 741 CVEGNQLLLVYEY-MKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 741 ~~~~~~~~lV~Ey-~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
+...+..++|+|| +++|+|.+++..+. .+++..+..++.||++||+|||+
T Consensus 107 ~~~~~~~~~v~e~~~~~~~L~~~l~~~~---------~~~~~~~~~~~~qi~~~l~~lH~ 157 (312)
T 2iwi_A 107 FETQEGFMLVLERPLPAQDLFDYITEKG---------PLGEGPSRCFFGQVVAAIQHCHS 157 (312)
T ss_dssp C-----CEEEEECCSSEEEHHHHHHHHC---------SCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EecCCeEEEEEEecCCCCCHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999 89999999998654 57788999999999999999994
No 348
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.40 E-value=1.4e-12 Score=126.85 Aligned_cols=86 Identities=24% Similarity=0.324 Sum_probs=42.8
Q ss_pred CCCCEEEeeCCcCCCCCCccccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccCCcCCCcCCccccCCCCCCEEEc
Q 003737 163 TTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHI 242 (799)
Q Consensus 163 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 242 (799)
++|++|+|++|++++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|
T Consensus 33 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L 112 (174)
T 2r9u_A 33 TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYL 112 (174)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccceeCHHHhccccCCCEEEe
Confidence 44445555555554444444555555555555555554433333445555555555555555443334555555555555
Q ss_pred cCCCCC
Q 003737 243 QGSSLE 248 (799)
Q Consensus 243 ~~N~l~ 248 (799)
++|.+.
T Consensus 113 ~~N~~~ 118 (174)
T 2r9u_A 113 YNNPWD 118 (174)
T ss_dssp CSSCBC
T ss_pred CCCCcc
Confidence 555554
No 349
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=99.40 E-value=4.4e-13 Score=145.80 Aligned_cols=115 Identities=19% Similarity=0.361 Sum_probs=98.6
Q ss_pred hhcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccC-hhhHHHHHHHHHHHHhCCCCcccceeEEEEEC-----CE
Q 003737 674 ATNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEG-----NQ 746 (799)
Q Consensus 674 ~t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~-----~~ 746 (799)
..++|...+.||+|+||.||+|.. .+|+.||||++.... ......+.+|++++.+++||||+++++++... ..
T Consensus 9 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 88 (353)
T 2b9h_A 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNE 88 (353)
T ss_dssp SCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCC
T ss_pred cccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccce
Confidence 346788899999999999999995 478999999997543 33456789999999999999999999998764 67
Q ss_pred EEEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 747 LLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 747 ~~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
.++||||++ |+|.+++..+ .+++..+..++.||++||+|||+
T Consensus 89 ~~lv~e~~~-~~L~~~~~~~----------~~~~~~~~~~~~qi~~~L~~LH~ 130 (353)
T 2b9h_A 89 VYIIQELMQ-TDLHRVISTQ----------MLSDDHIQYFIYQTLRAVKVLHG 130 (353)
T ss_dssp EEEEECCCS-EEHHHHHHHC----------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeccC-ccHHHHHhhc----------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 899999998 6999998753 47788999999999999999994
No 350
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.40 E-value=2e-13 Score=145.99 Aligned_cols=122 Identities=15% Similarity=0.226 Sum_probs=103.5
Q ss_pred HHHHHHhhcCCCCCCeecccCCeeEEEEEeCCCcEEEEEEcccc--ChhhHHHHHHHHHHHHhCC--CCcccceeEEEEE
Q 003737 668 LRQIKAATNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSK--SRQGNREFVNEIGMISAQQ--HPNLVKLYGCCVE 743 (799)
Q Consensus 668 ~~~~~~~t~~f~~~~~lG~G~~g~Vy~~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~--H~niv~l~g~~~~ 743 (799)
++.+....++|...+.||+|+||.||++...+++.||||++... .....+.+.+|++++.+++ |+||+++++++..
T Consensus 20 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~ 99 (313)
T 3cek_A 20 FQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT 99 (313)
T ss_dssp CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEEC
T ss_pred eeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeec
Confidence 33334445668889999999999999999888999999999654 3344578999999999997 5999999999999
Q ss_pred CCEEEEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 744 GNQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 744 ~~~~~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
.+..++||| +.+|+|.+++.... .+++..+..++.||++||+|||+
T Consensus 100 ~~~~~lv~e-~~~~~L~~~l~~~~---------~~~~~~~~~i~~qi~~aL~~LH~ 145 (313)
T 3cek_A 100 DQYIYMVME-CGNIDLNSWLKKKK---------SIDPWERKSYWKNMLEAVHTIHQ 145 (313)
T ss_dssp SSEEEEEEC-CCSEEHHHHHHHCS---------SCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEe-cCCCcHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999 66889999998654 56777888999999999999994
No 351
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=99.40 E-value=3.9e-13 Score=144.94 Aligned_cols=117 Identities=20% Similarity=0.299 Sum_probs=98.1
Q ss_pred cCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccChhhHHHHHHHHHHHHhCC-CCcccceeEEEEE--------CC
Q 003737 676 NNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQ-HPNLVKLYGCCVE--------GN 745 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~--------~~ 745 (799)
.+|+..+.||+|+||.||+|.. .+|+.||||++........+.+.+|++++.++. ||||+++++++.. ..
T Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~ 107 (337)
T 3ll6_A 28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQA 107 (337)
T ss_dssp EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSE
T ss_pred ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCc
Confidence 4677889999999999999995 578999999997666666778999999999996 9999999999953 34
Q ss_pred EEEEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 746 QLLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 746 ~~~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
..++||||++ |+|.+++...... ..+++..+..++.||+.||+|||+
T Consensus 108 ~~~lv~e~~~-g~L~~~l~~~~~~------~~~~~~~~~~i~~qi~~~l~~LH~ 154 (337)
T 3ll6_A 108 EFLLLTELCK-GQLVEFLKKMESR------GPLSCDTVLKIFYQTCRAVQHMHR 154 (337)
T ss_dssp EEEEEEECCS-EEHHHHHHHHHTT------CSCCHHHHHHHHHHHHHHHHHHHT
T ss_pred eEEEEEEecC-CCHHHHHHHhhcc------CCCCHHHHHHHHHHHHHHHHHHHh
Confidence 5899999996 7999998752211 157888999999999999999995
No 352
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=99.39 E-value=5.3e-13 Score=140.75 Aligned_cols=119 Identities=18% Similarity=0.326 Sum_probs=94.0
Q ss_pred hcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccC-hhhHHH-HHHHHHHHHhCCCCcccceeEEEEECCEEEEEE
Q 003737 675 TNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKS-RQGNRE-FVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 751 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~-f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 751 (799)
.++|+..+.||+|+||.||+|.. .+|+.||||+++... .....+ +..+...++.++||||+++++++.+++..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 45688889999999999999995 578999999997652 222333 444555678889999999999999999999999
Q ss_pred ecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 752 EYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 752 Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
||++ |+|.+++...... ...+++..+..++.|++.||+|||+
T Consensus 86 e~~~-~~l~~~l~~~~~~-----~~~~~~~~~~~i~~qi~~~l~~lH~ 127 (290)
T 3fme_A 86 ELMD-TSLDKFYKQVIDK-----GQTIPEDILGKIAVSIVKALEHLHS 127 (290)
T ss_dssp ECCS-EEHHHHHHHHHHT-----TCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ehhc-cchHHHHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 9998 5998887642110 1167888999999999999999994
No 353
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=99.39 E-value=9.2e-14 Score=152.93 Aligned_cols=122 Identities=8% Similarity=0.037 Sum_probs=92.7
Q ss_pred hcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEcccc---ChhhHHHHHHHH---HHHHhCCCCccccee-------EE
Q 003737 675 TNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSK---SRQGNREFVNEI---GMISAQQHPNLVKLY-------GC 740 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~---~~~~~~~f~~E~---~~l~~l~H~niv~l~-------g~ 740 (799)
.++|...+.||+|+||.||+|.. .+|+.||||++... .....+.|.+|+ +.+++++|||||+++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 45677889999999999999994 67999999999743 334457899999 556667899999998 66
Q ss_pred EEECC-----------------EEEEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 741 CVEGN-----------------QLLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 741 ~~~~~-----------------~~~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
+.+.+ ..++||||+ +|+|.+++...+..... ...+++..+..++.||++||+|||+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~ 224 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSST--HKSLVHHARLQLTLQVIRLLASLHH 224 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTT--THHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccc--cccccHHHHHHHHHHHHHHHHHHHh
Confidence 65543 278999999 68999999865321000 0022235677789999999999994
No 354
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=99.39 E-value=3.5e-13 Score=152.33 Aligned_cols=113 Identities=18% Similarity=0.267 Sum_probs=95.3
Q ss_pred hcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEcccc--ChhhHHHHHHHHHHHHhCCCCcccceeEEEEEC------C
Q 003737 675 TNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSK--SRQGNREFVNEIGMISAQQHPNLVKLYGCCVEG------N 745 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~------~ 745 (799)
.++|+..+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|++++++++|||||++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 46788899999999999999984 57899999999754 334457899999999999999999999999654 4
Q ss_pred EEEEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 746 QLLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 746 ~~~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
..|+|||||++ +|.+.+.. .+++..++.++.||++||+|||+
T Consensus 141 ~~~lv~E~~~~-~l~~~~~~-----------~l~~~~~~~~~~qil~aL~~lH~ 182 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQM-----------ELDHERMSYLLYQMLCGIKHLHS 182 (464)
T ss_dssp EEEEEEECCSE-EHHHHHTS-----------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCCC-CHHHHHhh-----------cCCHHHHHHHHHHHHHHHHHHHH
Confidence 67999999986 56666643 36688899999999999999994
No 355
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=99.39 E-value=3.5e-13 Score=142.19 Aligned_cols=115 Identities=23% Similarity=0.416 Sum_probs=89.8
Q ss_pred cCCCCCCeecccCCeeEEEEEeC--CCc--EEEEEEccccC---hhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEE
Q 003737 676 NNFDPANKVGEGGFGSVYKGILS--DGT--VIAVKQLSSKS---RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLL 748 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~~--~g~--~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 748 (799)
++|+..+.||+|+||.||+|... +++ .||||+++... ....+.+.+|++++.+++||||+++++++...+ .+
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~ 96 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK 96 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence 45778899999999999999852 333 68999987542 334578999999999999999999999997655 88
Q ss_pred EEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 749 LVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 749 lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
+|+||+++|+|.+++..... .+++..+..++.|+++||+|||+
T Consensus 97 ~v~e~~~~~~L~~~l~~~~~--------~~~~~~~~~~~~~i~~~l~~lH~ 139 (291)
T 1u46_A 97 MVTELAPLGSLLDRLRKHQG--------HFLLGTLSRYAVQVAEGMGYLES 139 (291)
T ss_dssp EEEECCTTCBHHHHHHHHGG--------GSCHHHHHHHHHHHHHHHHHHHH
T ss_pred eeEecccCCCHHHHHHhccC--------CcCHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999986432 46788899999999999999994
No 356
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=99.38 E-value=6.6e-13 Score=145.28 Aligned_cols=114 Identities=14% Similarity=0.262 Sum_probs=97.9
Q ss_pred hcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccC-hhhHHHHHHHHHHHHhCCCCcccceeEEEEEC-----CEE
Q 003737 675 TNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEG-----NQL 747 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~-----~~~ 747 (799)
.++|+..+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|++++.+++||||+++++++... ...
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 45788899999999999999985 478899999997543 33457899999999999999999999999765 368
Q ss_pred EEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 748 LLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 748 ~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
++||||++ |+|.+++... .+++..+..++.||+.||+|||+
T Consensus 106 ~iv~e~~~-~~L~~~l~~~----------~~~~~~~~~i~~qi~~aL~~LH~ 146 (364)
T 3qyz_A 106 YIVQDLME-TDLYKLLKTQ----------HLSNDHICYFLYQILRGLKYIHS 146 (364)
T ss_dssp EEEEECCS-EEHHHHHHHC----------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEcccC-cCHHHHHHhC----------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999998 5999998754 47788999999999999999994
No 357
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.38 E-value=6.3e-12 Score=138.98 Aligned_cols=251 Identities=10% Similarity=0.095 Sum_probs=195.8
Q ss_pred CCcccCCccccCCCCCCEEEccCCcCCCcCcccccccceeEEEccCCcCcCcCCcccCCCCCCCEEEeeCCcCCCCCCcc
Q 003737 103 NLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPD 182 (799)
Q Consensus 103 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~ 182 (799)
+++..-...|.+. +|+.++|..+ ++.+...+|...+|+.+.+.. .++.+-+..|.++++|+.++|++|+++......
T Consensus 123 ~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~a 199 (401)
T 4fdw_A 123 SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNSTVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPAST 199 (401)
T ss_dssp TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTCCCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTT
T ss_pred ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCCCceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhh
Confidence 3454445567774 7999999877 777778888887899999986 777777889999999999999999998544445
Q ss_pred ccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccCCcCCCcCCccccCCCCCCEEEccCCCCCCCCchhhhcCCCCC
Q 003737 183 IRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLT 262 (799)
Q Consensus 183 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 262 (799)
|. ..+|+.+.|..+ ++..-..+|.++++|+.+++..| ++..-...|.+ .+|+.+.+ .+.++......|.++++|+
T Consensus 200 F~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~ 274 (401)
T 4fdw_A 200 FV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELA 274 (401)
T ss_dssp TT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCC
T ss_pred Ee-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCC
Confidence 65 689999999855 77566778999999999999875 55555667777 79999999 4567766688999999999
Q ss_pred eEEcCCCCCCCC---CCC--ccCC-CCccEEEccCCcCcccCCccccCCCCCCeeccccccCCCCCchhhhccCCCCEEe
Q 003737 263 DLRISDLKGSES---AFP--KLDK-MNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMY 336 (799)
Q Consensus 263 ~L~L~~n~~~~~---~~~--~l~~-~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 336 (799)
.+++.++..... .++ .|.. .+|+.++|. +.++..-...|.++++|+.++|..| ++..-+.+|.++ +|+.++
T Consensus 275 ~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~ 351 (401)
T 4fdw_A 275 EVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVK 351 (401)
T ss_dssp EEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEE
T ss_pred EEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEE
Confidence 999987544311 122 2555 689999999 5587677788999999999999665 776777899999 999999
Q ss_pred ccCCcCCCcCChhhh----cCCCEEEeecCcCc
Q 003737 337 LTGNKLTGPVPKYIF----NSNKNVDISLNNFT 365 (799)
Q Consensus 337 L~~N~l~g~~p~~~~----~~l~~l~ls~N~~~ 365 (799)
+.+|.+.. ++...+ ..+..+.+..|.+.
T Consensus 352 l~~n~~~~-l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 352 VEGTTPPQ-VFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp ECCSSCCB-CCCSSCCCSCTTCCEEEECGGGHH
T ss_pred EcCCCCcc-cccccccCCCCCccEEEeCHHHHH
Confidence 99998874 443332 24567888776543
No 358
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.38 E-value=5.9e-13 Score=156.83 Aligned_cols=118 Identities=18% Similarity=0.293 Sum_probs=98.8
Q ss_pred HhhcCCCCCCeecccCCeeEEEEEeC----CCcEEEEEEccccC-hhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEE
Q 003737 673 AATNNFDPANKVGEGGFGSVYKGILS----DGTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQL 747 (799)
Q Consensus 673 ~~t~~f~~~~~lG~G~~g~Vy~~~~~----~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~ 747 (799)
...++|...+.||+|+||.||+|... .+..||||+++... ....+.|.+|+.++.+++|||||++++++. ++..
T Consensus 387 i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~ 465 (656)
T 2j0j_A 387 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPV 465 (656)
T ss_dssp CCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSC
T ss_pred cccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCce
Confidence 34456777889999999999999863 25679999987643 334578999999999999999999999984 5678
Q ss_pred EEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 748 LLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 748 ~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
++||||+++|+|.+++..+.. .+++..+..++.||++||+|||+
T Consensus 466 ~lv~E~~~~g~L~~~l~~~~~--------~l~~~~~~~i~~qi~~aL~~LH~ 509 (656)
T 2j0j_A 466 WIIMELCTLGELRSFLQVRKF--------SLDLASLILYAYQLSTALAYLES 509 (656)
T ss_dssp EEEEECCTTCBHHHHHHHTTT--------TCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEcCCCCcHHHHHHhccC--------CCCHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999975432 46788888999999999999994
No 359
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=99.38 E-value=8.9e-13 Score=144.67 Aligned_cols=113 Identities=17% Similarity=0.255 Sum_probs=96.3
Q ss_pred hcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEcccc--ChhhHHHHHHHHHHHHhCCCCcccceeEEEEECC------
Q 003737 675 TNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSK--SRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGN------ 745 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~------ 745 (799)
.++|...+.||+|+||.||+|.. .+++.||||++... .....+.+.+|++++++++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 46788899999999999999984 47899999999653 2334567899999999999999999999997654
Q ss_pred EEEEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 746 QLLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 746 ~~~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
..++||||+++ +|.+++.. .+++..+..++.||+.||+|||+
T Consensus 104 ~~~lv~e~~~~-~l~~~~~~-----------~~~~~~~~~i~~qi~~al~~lH~ 145 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQM-----------ELDHERMSYLLYQMLCGIKHLHS 145 (371)
T ss_dssp EEEEEEECCSE-EHHHHHHS-----------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEcCCC-CHHHHHhh-----------ccCHHHHHHHHHHHHHHHHHHHH
Confidence 78999999984 88888753 46678899999999999999994
No 360
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=99.38 E-value=3.6e-13 Score=146.26 Aligned_cols=114 Identities=17% Similarity=0.230 Sum_probs=90.8
Q ss_pred cCCCCCCeecccCCeeEEEEEeC----CCcEEEEEEccccChh-----------hHHHHHHHHHHHHhCCCCcccceeEE
Q 003737 676 NNFDPANKVGEGGFGSVYKGILS----DGTVIAVKQLSSKSRQ-----------GNREFVNEIGMISAQQHPNLVKLYGC 740 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~~----~g~~vAvK~l~~~~~~-----------~~~~f~~E~~~l~~l~H~niv~l~g~ 740 (799)
++|...+.||+|+||.||+|... ++..||||+....... ..+.+.+|+..+..++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 45778899999999999999964 5788999998654321 12357789999999999999999999
Q ss_pred EEE----CCEEEEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 741 CVE----GNQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 741 ~~~----~~~~~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
+.. ....++||||+ +|+|.+++...+ .+++..+..++.||+.||+|||+
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~---------~~~~~~~~~i~~qi~~aL~~LH~ 169 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQNG---------TFKKSTVLQLGIRMLDVLEYIHE 169 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBGGG---------BCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHHh
Confidence 988 67899999999 999999997654 57788999999999999999994
No 361
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.38 E-value=1.1e-13 Score=148.14 Aligned_cols=120 Identities=15% Similarity=0.315 Sum_probs=101.3
Q ss_pred HHHHhhcCCCCCCeecccCCeeEEEEEeCCCcEEEEEEccccC--hhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEE
Q 003737 670 QIKAATNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQL 747 (799)
Q Consensus 670 ~~~~~t~~f~~~~~lG~G~~g~Vy~~~~~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~ 747 (799)
+.....++|...+.||+|+||.||+|...+ .||+|.++... ....+.|.+|++++.+++|+||+++++++.+.+..
T Consensus 27 ~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 104 (319)
T 2y4i_B 27 EWDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHL 104 (319)
T ss_dssp GSSSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCE
T ss_pred cccCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCce
Confidence 334455778889999999999999998753 49999986542 22345688999999999999999999999999999
Q ss_pred EEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 748 LLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 748 ~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
++||||+++|+|.+++..... .+++..+..++.||++||+|||+
T Consensus 105 ~iv~e~~~~~~L~~~l~~~~~--------~~~~~~~~~i~~qi~~al~~lH~ 148 (319)
T 2y4i_B 105 AIITSLCKGRTLYSVVRDAKI--------VLDVNKTRQIAQEIVKGMGYLHA 148 (319)
T ss_dssp EEECBCCCSEEHHHHTTSSCC--------CCCSHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeecccCCcHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999976532 46777899999999999999994
No 362
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=99.38 E-value=8.9e-13 Score=146.47 Aligned_cols=119 Identities=23% Similarity=0.366 Sum_probs=87.8
Q ss_pred CCC-CCeecccCCeeEEEEEeC---CCcEEEEEEccccChhhHHHHHHHHHHHHhCCCCcccceeEEEEE--CCEEEEEE
Q 003737 678 FDP-ANKVGEGGFGSVYKGILS---DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVE--GNQLLLVY 751 (799)
Q Consensus 678 f~~-~~~lG~G~~g~Vy~~~~~---~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~--~~~~~lV~ 751 (799)
|+. .++||+|+||.||+|... +++.||||++.... ..+.+.+|++++.+++|||||++++++.. ....++||
T Consensus 22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~ 99 (405)
T 3rgf_A 22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLF 99 (405)
T ss_dssp EECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEE
T ss_pred hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEE
Confidence 443 458999999999999964 57899999997542 23578899999999999999999999965 67899999
Q ss_pred ecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 752 EYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 752 Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
||++ |+|.+++..............+++..++.++.||+.||+|||+
T Consensus 100 e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~ 146 (405)
T 3rgf_A 100 DYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA 146 (405)
T ss_dssp ECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHH
T ss_pred eCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHh
Confidence 9997 5888888643221111122258888999999999999999994
No 363
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.37 E-value=4.4e-13 Score=159.18 Aligned_cols=114 Identities=15% Similarity=0.344 Sum_probs=95.5
Q ss_pred hcCCCCCCeecccCCeeEEEEEeC--CCcEEEEEEccccC-hhhHHHHHHHHHHHHhCCCCcccceeEEEEECCE-----
Q 003737 675 TNNFDPANKVGEGGFGSVYKGILS--DGTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQ----- 746 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~~~--~g~~vAvK~l~~~~-~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~----- 746 (799)
.++|...+.||+|+||.||+|... +|+.||||++.... ....+.|.+|++++.+++|||||++++++...+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 367888999999999999999964 68999999986543 3445689999999999999999999999987654
Q ss_pred EEEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 747 LLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 747 ~~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
.|+|||||++|+|.+++.. .+++..+..++.||++||+|||+
T Consensus 159 ~~lv~E~~~g~~L~~~~~~-----------~l~~~~~~~~~~qi~~aL~~lH~ 200 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKGQ-----------KLPVAEAIAYLLEILPALSYLHS 200 (681)
T ss_dssp EEEEEECCCCEECC----C-----------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCcHHHHHhC-----------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 7999999999999987653 46778899999999999999994
No 364
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=99.37 E-value=3.7e-13 Score=147.43 Aligned_cols=114 Identities=22% Similarity=0.363 Sum_probs=90.0
Q ss_pred hcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEcccc--ChhhHHHHHHHHHHHHhCCCCcccceeEEEEEC------C
Q 003737 675 TNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSK--SRQGNREFVNEIGMISAQQHPNLVKLYGCCVEG------N 745 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~------~ 745 (799)
.++|...+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|++++++++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 36788899999999999999984 57899999999653 233457889999999999999999999998754 5
Q ss_pred EEEEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 746 QLLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 746 ~~~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
..++|+||+ +++|.+++... .+++..++.++.||++||+|||+
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~~----------~l~~~~~~~i~~qi~~aL~~LH~ 150 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKCQ----------KLTDDHVQFLIYQILRGLKYIHS 150 (367)
T ss_dssp CCEEEEECC-CEECC-----C----------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEeccc-CCCHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 679999999 68999988653 57788999999999999999994
No 365
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=99.37 E-value=3.3e-13 Score=146.94 Aligned_cols=111 Identities=13% Similarity=0.167 Sum_probs=93.8
Q ss_pred cCCCCCCeecccCCeeEEEEEeC---------CCcEEEEEEccccChhhHHHHHHHHHHHHhCCCCcccc----------
Q 003737 676 NNFDPANKVGEGGFGSVYKGILS---------DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVK---------- 736 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~~---------~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~---------- 736 (799)
++|...+.||+|+||.||+|... +++.||||.+... +.+.+|++++.+++|||||+
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence 56888899999999999999964 3789999998653 36889999999999999998
Q ss_pred -----eeEEEEE-CCEEEEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 737 -----LYGCCVE-GNQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 737 -----l~g~~~~-~~~~~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
+++++.. .+..++||||+ +|+|.+++...... .+++..+..++.||++||+|||+
T Consensus 117 ~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~-------~l~~~~~~~i~~qi~~~L~~LH~ 177 (352)
T 2jii_A 117 LAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKH-------VLSERSVLQVACRLLDALEFLHE 177 (352)
T ss_dssp CSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGG-------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcC-------CCCHHHHHHHHHHHHHHHHHHHh
Confidence 6788876 77899999999 99999999865211 67888999999999999999994
No 366
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=99.37 E-value=5.9e-13 Score=143.04 Aligned_cols=118 Identities=22% Similarity=0.452 Sum_probs=96.0
Q ss_pred hhcCCCCCCeecccCCeeEEEEEe--CCCcEEEEEEccccC--hhhHHHHHHHHHHHHhC---CCCcccceeEEEE----
Q 003737 674 ATNNFDPANKVGEGGFGSVYKGIL--SDGTVIAVKQLSSKS--RQGNREFVNEIGMISAQ---QHPNLVKLYGCCV---- 742 (799)
Q Consensus 674 ~t~~f~~~~~lG~G~~g~Vy~~~~--~~g~~vAvK~l~~~~--~~~~~~f~~E~~~l~~l---~H~niv~l~g~~~---- 742 (799)
+.++|...+.||+|+||.||+|.. .+|+.||||+++... ......+.+|++++.++ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 456788999999999999999996 468899999986532 22234577788777665 8999999999987
Q ss_pred -ECCEEEEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 743 -EGNQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 743 -~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
.....++||||++ |+|.+++...... .+++..+..++.||++||+|||+
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~-------~~~~~~~~~~~~qi~~~l~~lH~ 138 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPEP-------GVPTETIKDMMFQLLRGLDFLHS 138 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCTT-------CSCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCceEEEEEecCC-CCHHHHHHhcccC-------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 4567899999998 6999999765422 47788999999999999999994
No 367
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=99.37 E-value=5.4e-13 Score=145.98 Aligned_cols=117 Identities=14% Similarity=0.236 Sum_probs=94.1
Q ss_pred hhcCCCCCCeecccCCeeEEEEEeCC------CcEEEEEEccccChhh-----------HHHHHHHHHHHHhCCCCcccc
Q 003737 674 ATNNFDPANKVGEGGFGSVYKGILSD------GTVIAVKQLSSKSRQG-----------NREFVNEIGMISAQQHPNLVK 736 (799)
Q Consensus 674 ~t~~f~~~~~lG~G~~g~Vy~~~~~~------g~~vAvK~l~~~~~~~-----------~~~f~~E~~~l~~l~H~niv~ 736 (799)
..++|...+.||+|+||.||+|.... ++.||||++....... ...+..|+..+.+++|+||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 34578889999999999999998653 4789999986543211 123556777788899999999
Q ss_pred eeEEEEEC----CEEEEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 737 LYGCCVEG----NQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 737 l~g~~~~~----~~~~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
+++++... ...++||||+ +|+|.+++..... .+++..+..++.||+.||+|||+
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~--------~l~~~~~~~i~~qi~~~l~~lH~ 170 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAK--------RFSRKTVLQLSLRILDILEYIHE 170 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTS--------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccC--------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 99998764 4589999999 9999999986532 57888999999999999999994
No 368
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.36 E-value=1.9e-12 Score=125.93 Aligned_cols=104 Identities=19% Similarity=0.261 Sum_probs=57.5
Q ss_pred EEEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCcCcccccccceeEEEccCCcCcCcCCcccCCCCCCCEEEeeCCc
Q 003737 95 VTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNL 174 (799)
Q Consensus 95 ~~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~ 174 (799)
+.++++++.++ .+|..+. ++|++|+|++|++++.+| ..|.++++|++|+|++|+
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~-----------------------~~~~~l~~L~~L~Ls~N~ 68 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEP-----------------------GVFDHLVNLQQLYFNSNK 68 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCT-----------------------TTTTTCTTCCEEECCSSC
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCH-----------------------HHhcCCcCCCEEECCCCC
Confidence 46777777775 5565443 566666666666655444 445555555555555555
Q ss_pred CCCCCCccccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccCCcCC
Q 003737 175 FTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFS 224 (799)
Q Consensus 175 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 224 (799)
|++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|.+.
T Consensus 69 l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 69 LTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred CCccChhHhCCcchhhEEECCCCccceeCHHHhccccCCCEEEeCCCCcc
Confidence 55433334455555555555555555433334555555555555555554
No 369
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=99.36 E-value=1.2e-12 Score=146.65 Aligned_cols=117 Identities=16% Similarity=0.218 Sum_probs=98.4
Q ss_pred hhcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccChhhHHHHHHHHHHHHhC------CCCcccceeEEEEECCE
Q 003737 674 ATNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSRQGNREFVNEIGMISAQ------QHPNLVKLYGCCVEGNQ 746 (799)
Q Consensus 674 ~t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l------~H~niv~l~g~~~~~~~ 746 (799)
...+|+..+.||+|+||.||+|.. .+++.||||+++.. ....+.+.+|++++..+ .|+||+++++++...+.
T Consensus 95 ~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~ 173 (429)
T 3kvw_A 95 VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNH 173 (429)
T ss_dssp ETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTE
T ss_pred ccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCe
Confidence 345688899999999999999985 46899999999753 33346778888888776 57799999999999999
Q ss_pred EEEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 747 LLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 747 ~~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
.++||||+. |+|.+++...... .+++..++.++.||++||+|||+
T Consensus 174 ~~lv~e~~~-~~L~~~l~~~~~~-------~~~~~~~~~i~~qi~~aL~~LH~ 218 (429)
T 3kvw_A 174 ICMTFELLS-MNLYELIKKNKFQ-------GFSLPLVRKFAHSILQCLDALHK 218 (429)
T ss_dssp EEEEECCCC-CBHHHHHHHTTTC-------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeccC-CCHHHHHHhccCC-------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999996 6999999865422 47788999999999999999994
No 370
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.35 E-value=1.8e-12 Score=139.43 Aligned_cols=120 Identities=15% Similarity=0.372 Sum_probs=96.0
Q ss_pred hcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccC-hhhHHHHHHHHH-HHHhCCCCcccceeEEEEECCEEEEEE
Q 003737 675 TNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKS-RQGNREFVNEIG-MISAQQHPNLVKLYGCCVEGNQLLLVY 751 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~f~~E~~-~l~~l~H~niv~l~g~~~~~~~~~lV~ 751 (799)
.++|...+.||+|+||.||+|.. .+|+.||||++.... .....++.+|+. +++.++||||+++++++.+.+..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 35688889999999999999996 478999999997653 334456777776 677789999999999999999999999
Q ss_pred ecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 752 EYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 752 Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
||+++ +|.+++....... ...+++..+..++.|+++||+|||+
T Consensus 101 e~~~~-~l~~~~~~~~~~~----~~~~~~~~~~~i~~~i~~~l~~lH~ 143 (327)
T 3aln_A 101 ELMST-SFDKFYKYVYSVL----DDVIPEEILGKITLATVKALNHLKE 143 (327)
T ss_dssp CCCSE-EHHHHHHHHHHTT----CCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred eecCC-ChHHHHHHHHhhh----cccCcHHHHHHHHHHHHHHHHHHhc
Confidence 99985 8888876321110 1157788899999999999999994
No 371
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=99.35 E-value=1e-12 Score=144.15 Aligned_cols=113 Identities=24% Similarity=0.389 Sum_probs=96.5
Q ss_pred hcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEcccc--ChhhHHHHHHHHHHHHhCCCCcccceeEEEEECCEE----
Q 003737 675 TNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSK--SRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQL---- 747 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~---- 747 (799)
.++|...+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|++++.+++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 35688889999999999999985 57899999999764 233357899999999999999999999999876654
Q ss_pred --EEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 748 --LLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 748 --~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
++||||++ |+|.+++.. .+++..+..++.||+.||+|||+
T Consensus 121 ~~~lv~e~~~-~~l~~~~~~-----------~~~~~~~~~i~~qi~~aL~~LH~ 162 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMGM-----------EFSEEKIQYLVYQMLKGLKYIHS 162 (371)
T ss_dssp CCEEEEECCC-EEHHHHTTS-----------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEcccc-ccHHHHhhc-----------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999998 699888742 46788999999999999999994
No 372
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.35 E-value=1.8e-12 Score=140.25 Aligned_cols=114 Identities=19% Similarity=0.251 Sum_probs=90.5
Q ss_pred hhcCCCCC-CeecccCCeeEEEEEeC-CCcEEEEEEccccChhhHHHHHHHH-HHHHhCCCCcccceeEEEEE----CCE
Q 003737 674 ATNNFDPA-NKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEI-GMISAQQHPNLVKLYGCCVE----GNQ 746 (799)
Q Consensus 674 ~t~~f~~~-~~lG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~-~~l~~l~H~niv~l~g~~~~----~~~ 746 (799)
..++|... ++||+|+||.||+|... +|+.||||++.... ...+|+ ..+..++||||+++++++.. ...
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 100 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP-----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRC 100 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH-----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH-----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCce
Confidence 34567774 46999999999999964 78999999986531 222333 34566799999999999876 445
Q ss_pred EEEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 747 LLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 747 ~~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
.++||||+++|+|.+++...... .+++..+..++.||+.||+|||+
T Consensus 101 ~~lv~e~~~gg~L~~~l~~~~~~-------~l~~~~~~~i~~ql~~~l~~LH~ 146 (336)
T 3fhr_A 101 LLIIMECMEGGELFSRIQERGDQ-------AFTEREAAEIMRDIGTAIQFLHS 146 (336)
T ss_dssp EEEEEECCTTEEHHHHHHTC-CC-------CCBHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeccCCCCHHHHHHhcCCC-------CCCHHHHHHHHHHHHHHHHHHHh
Confidence 89999999999999999865422 57888999999999999999994
No 373
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=99.35 E-value=1.9e-12 Score=139.79 Aligned_cols=111 Identities=25% Similarity=0.348 Sum_probs=89.2
Q ss_pred hcCCCCCCeecccCCeeEEEEEeCCCcEEEEEEccccChhhHHHHHHHHHHH--HhCCCCcccceeEEEEE-----CCEE
Q 003737 675 TNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMI--SAQQHPNLVKLYGCCVE-----GNQL 747 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l--~~l~H~niv~l~g~~~~-----~~~~ 747 (799)
.++|...+.||+|+||.||+|+. +++.||||++... ....+..|.++. ..++|+||+++++++.. ....
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 87 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFA---NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY 87 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeecc---chhhHHHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence 35688889999999999999986 6899999999643 234455555554 45899999999987653 2357
Q ss_pred EEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 748 LLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 748 ~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
++||||+++|+|.+++.... .++..+..++.||++||+|||+
T Consensus 88 ~lv~e~~~~g~L~~~l~~~~----------~~~~~~~~i~~qi~~~L~~LH~ 129 (336)
T 3g2f_A 88 LLVMEYYPNGSLXKYLSLHT----------SDWVSSCRLAHSVTRGLAYLHT 129 (336)
T ss_dssp EEEECCCTTCBHHHHHHHCC----------BCHHHHHHHHHHHHHHHHHHHC
T ss_pred EEEEecCCCCcHHHHHhhcc----------cchhHHHHHHHHHHHHHHHHHh
Confidence 89999999999999997653 3566788889999999999995
No 374
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=99.34 E-value=1.1e-12 Score=144.74 Aligned_cols=116 Identities=17% Similarity=0.298 Sum_probs=95.3
Q ss_pred hcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccChhhHHHHHHHHHHHHhCC--------CCcccceeEEEE---
Q 003737 675 TNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQ--------HPNLVKLYGCCV--- 742 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~--------H~niv~l~g~~~--- 742 (799)
.++|...+.||+|+||.||+|.. .+++.||||+++.. ....+.+.+|++++.+++ |+||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 36788899999999999999984 57899999999753 334567899999999886 788999999987
Q ss_pred -ECCEEEEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 743 -EGNQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 743 -~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
.....++||||+ +|+|.+++...... .+++..++.++.||++||+|||+
T Consensus 115 ~~~~~~~lv~e~~-~~~l~~~~~~~~~~-------~~~~~~~~~i~~qi~~aL~~lH~ 164 (397)
T 1wak_A 115 VNGTHICMVFEVL-GHHLLKWIIKSNYQ-------GLPLPCVKKIIQQVLQGLDYLHT 164 (397)
T ss_dssp TTEEEEEEEECCC-CCBHHHHHHHTTTS-------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCceEEEEEecc-CccHHHHHHhcccC-------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 445789999999 56777766544321 57888999999999999999994
No 375
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=99.34 E-value=1.9e-12 Score=139.51 Aligned_cols=116 Identities=17% Similarity=0.279 Sum_probs=98.7
Q ss_pred hcCCCCCCeecccCCeeEEEEEe--CCCcEEEEEEccccChhhHHHHHHHHHHHHhCCCCc------ccceeEEEEECCE
Q 003737 675 TNNFDPANKVGEGGFGSVYKGIL--SDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPN------LVKLYGCCVEGNQ 746 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~~--~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~n------iv~l~g~~~~~~~ 746 (799)
.++|+..+.||+|+||.||+|.. .+++.||||+++.. ....+.+.+|++++.+++|++ ++++++++...+.
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~ 91 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH 91 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence 35688899999999999999985 36889999999653 334567889999998887654 9999999999999
Q ss_pred EEEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 747 LLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 747 ~~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
.++||||+ +|+|.+++...... .+++..+..++.||++||+|||+
T Consensus 92 ~~lv~e~~-~~~l~~~l~~~~~~-------~~~~~~~~~~~~qi~~~l~~lH~ 136 (339)
T 1z57_A 92 ICIVFELL-GLSTYDFIKENGFL-------PFRLDHIRKMAYQICKSVNFLHS 136 (339)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTC-------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEcCC-CCCHHHHHHhcCCC-------CCcHHHHHHHHHHHHHHHHHHHH
Confidence 99999999 88999999865422 57788899999999999999994
No 376
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=99.34 E-value=9.9e-13 Score=143.21 Aligned_cols=113 Identities=23% Similarity=0.381 Sum_probs=95.5
Q ss_pred hcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEcccc--ChhhHHHHHHHHHHHHhCCCCcccceeEEEEECCE-----
Q 003737 675 TNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSK--SRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQ----- 746 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~----- 746 (799)
.++|...+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|++++.+++||||+++++++...+.
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 35678889999999999999995 57899999999654 23335689999999999999999999999987653
Q ss_pred -EEEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 747 -LLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 747 -~~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
.++||||++ |+|.+++.. .+++..+..++.||++||+|||+
T Consensus 103 ~~~lv~e~~~-~~l~~~~~~-----------~~~~~~~~~i~~qi~~al~~LH~ 144 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMGL-----------KFSEEKIQYLVYQMLKGLKYIHS 144 (353)
T ss_dssp CCEEEEECCS-EEGGGTTTS-----------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEecccc-CCHHHHhcC-----------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 499999998 688877642 46788999999999999999994
No 377
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.33 E-value=3.5e-13 Score=156.66 Aligned_cols=118 Identities=22% Similarity=0.363 Sum_probs=98.4
Q ss_pred cCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEcccc-ChhhHHHHHHHHHHHHhCCCCcccceeEEEEE------CCEE
Q 003737 676 NNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSK-SRQGNREFVNEIGMISAQQHPNLVKLYGCCVE------GNQL 747 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~-~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~------~~~~ 747 (799)
++|...+.||+|+||.||+|.. .+|+.||||++... .....+.|.+|++++.+++|||||++++++.. .+..
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~ 93 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP 93 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence 6789999999999999999985 57899999998764 34446789999999999999999999998765 5678
Q ss_pred EEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 748 LLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 748 ~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
++||||+++|+|.+++...... ..+++..+..++.|++.||+|||+
T Consensus 94 ~LVmEy~~ggsL~~~L~~~~~~------~~lse~~i~~I~~QLl~aL~yLHs 139 (676)
T 3qa8_A 94 LLAMEYCEGGDLRKYLNQFENC------CGLKEGPIRTLLSDISSALRYLHE 139 (676)
T ss_dssp CCEEECCSSCBHHHHHHSSSCT------TCCCSSHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCCCCHHHHHHhcccC------CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999864321 146677888999999999999994
No 378
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=99.32 E-value=3.9e-12 Score=134.51 Aligned_cols=115 Identities=21% Similarity=0.319 Sum_probs=96.3
Q ss_pred hhcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccChhhHHHHHHHHHHHHhCCCCcccceeEEE-EECCEEEEEE
Q 003737 674 ATNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCC-VEGNQLLLVY 751 (799)
Q Consensus 674 ~t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~-~~~~~~~lV~ 751 (799)
..++|...+.||+|+||.||+|.. .+|+.||||++..... .+.+.+|++++.+++|++++..+.++ ...+..++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 3uzp_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred eccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEE
Confidence 346788899999999999999995 6799999999865432 34689999999999998877666655 5677889999
Q ss_pred ecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 752 EYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 752 Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
||+ +|+|.+++..... .+++..+..++.||++||+|||+
T Consensus 85 e~~-~~~L~~~~~~~~~--------~~~~~~~~~i~~qi~~~l~~lH~ 123 (296)
T 3uzp_A 85 ELL-GPSLEDLFNFCSR--------KFSLKTVLLLADQMISRIEYIHS 123 (296)
T ss_dssp ECC-CCBHHHHHHHTTT--------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred Eec-CCCHHHHHHhhcc--------CCCHHHHHHHHHHHHHHHHHHHh
Confidence 999 9999999974332 57888999999999999999994
No 379
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.31 E-value=8.5e-13 Score=141.70 Aligned_cols=119 Identities=17% Similarity=0.274 Sum_probs=100.4
Q ss_pred HHhhcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccChh------hHHHHHHHHHHHHhCC--CCcccceeEEEE
Q 003737 672 KAATNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSRQ------GNREFVNEIGMISAQQ--HPNLVKLYGCCV 742 (799)
Q Consensus 672 ~~~t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~------~~~~f~~E~~~l~~l~--H~niv~l~g~~~ 742 (799)
....++|+..+.||+|+||.||+|.. .+++.||||++...... ..+.+.+|++++.+++ |+||+++++++.
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~ 118 (320)
T 3a99_A 39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE 118 (320)
T ss_dssp -CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE
T ss_pred CCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe
Confidence 33456788899999999999999984 57899999999654211 2246788999999996 599999999999
Q ss_pred ECCEEEEEEecCCC-CcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 743 EGNQLLLVYEYMKN-NCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 743 ~~~~~~lV~Ey~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
..+..++|+||+.+ |+|.+++.... .+++..+..++.||++||+|||+
T Consensus 119 ~~~~~~lv~e~~~~~~~L~~~l~~~~---------~l~~~~~~~i~~qi~~~L~~LH~ 167 (320)
T 3a99_A 119 RPDSFVLILERPEPVQDLFDFITERG---------ALQEELARSFFWQVLEAVRHCHN 167 (320)
T ss_dssp CSSEEEEEEECCSSEEEHHHHHHHHC---------SCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCcEEEEEEcCCCCccHHHHHhccC---------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999986 89999998644 57788899999999999999994
No 380
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=99.31 E-value=4e-12 Score=138.57 Aligned_cols=123 Identities=21% Similarity=0.324 Sum_probs=85.6
Q ss_pred HHHHHhhcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccChhhHHHHHHHHHHHHhCCCCcccceeEEEEECCE-
Q 003737 669 RQIKAATNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQ- 746 (799)
Q Consensus 669 ~~~~~~t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~- 746 (799)
.+.....++|...+.||+|+||.||+|.. .+|+.||||++.... .....+.+|++.+.+++||||+++++++...+.
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 34455678899999999999999999996 478999999985532 223467788888999999999999999976433
Q ss_pred ------EEEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhc
Q 003737 747 ------LLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFF 798 (799)
Q Consensus 747 ------~~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH 798 (799)
.++||||+++ +|.+.+..... ....+++..+..++.|++.||+|||
T Consensus 95 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~-----~~~~~~~~~~~~~~~qi~~al~~lH 146 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPD-TLHRCCRNYYR-----RQVAPPPILIKVFLFQLIRSIGCLH 146 (360)
T ss_dssp CTTCEEEEEEEECCSC-BHHHHHHHHHT-----TTCCCCHHHHHHHHHHHHHHHHHHT
T ss_pred cccceeEEEEeecccc-cHHHHHHHHhh-----cccCCCHHHHHHHHHHHHHHHHHHh
Confidence 7899999986 55544432110 0115678889999999999999999
No 381
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.31 E-value=2.3e-12 Score=144.23 Aligned_cols=112 Identities=15% Similarity=0.186 Sum_probs=91.9
Q ss_pred cCCCCCCeecccCCeeEEEEEeCCCcEEEEEEccccChhhHHHHHHHHHHHHhC-CCCcccceeEEEEECCEEEEEEecC
Q 003737 676 NNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQ-QHPNLVKLYGCCVEGNQLLLVYEYM 754 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~Ey~ 754 (799)
.+|...+.||+|+||+||.....+|+.||||++..... ..+.+|++++.++ +|||||++++++.+.+..++||||+
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~ 100 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELC 100 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECC
Confidence 45778899999999997655556789999999965432 2356899999999 7999999999999999999999999
Q ss_pred CCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 755 KNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 755 ~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
+ |+|.+++..... ...+..+..++.||++||+|||+
T Consensus 101 ~-g~L~~~l~~~~~--------~~~~~~~~~i~~qi~~aL~~LH~ 136 (432)
T 3p23_A 101 A-ATLQEYVEQKDF--------AHLGLEPITLLQQTTSGLAHLHS 136 (432)
T ss_dssp S-EEHHHHHHSSSC--------CCCSSCHHHHHHHHHHHHHHHHH
T ss_pred C-CCHHHHHHhcCC--------CccchhHHHHHHHHHHHHHHHHH
Confidence 7 699999986542 23333566779999999999994
No 382
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=99.30 E-value=4.7e-12 Score=133.80 Aligned_cols=115 Identities=21% Similarity=0.319 Sum_probs=92.6
Q ss_pred hhcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccChhhHHHHHHHHHHHHhCCCCcccceeEEE-EECCEEEEEE
Q 003737 674 ATNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCC-VEGNQLLLVY 751 (799)
Q Consensus 674 ~t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~-~~~~~~~lV~ 751 (799)
..++|+..+.||+|+||.||+|.. .+++.||||.+..... .+.+.+|++++.+++|++++..++++ ...+..++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence 456799999999999999999995 6789999998754322 23588999999999998877776655 6678899999
Q ss_pred ecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 752 EYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 752 Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
||+ +|+|.+++..... .+++..+..++.||+.||+|||+
T Consensus 85 e~~-~~~L~~~~~~~~~--------~~~~~~~~~i~~qi~~~l~~LH~ 123 (296)
T 4hgt_A 85 ELL-GPSLEDLFNFCSR--------KFSLKTVLLLADQMISRIEYIHS 123 (296)
T ss_dssp ECC-CCBHHHHHHHTTS--------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred Ecc-CCCHHHHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 999 9999999975432 57788999999999999999994
No 383
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=99.30 E-value=3.2e-12 Score=142.64 Aligned_cols=113 Identities=21% Similarity=0.369 Sum_probs=89.2
Q ss_pred CCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccChhhHHHHHHHHHHHHhCCCCcccceeEEEEEC----C--EEEE
Q 003737 677 NFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEG----N--QLLL 749 (799)
Q Consensus 677 ~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~----~--~~~l 749 (799)
.|...+.||+|+||.||+|+. .+|+.||||++..... .+.+|++++++++|+|||++++++... + ..++
T Consensus 55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~l 130 (420)
T 1j1b_A 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 130 (420)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEE
T ss_pred eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEe
Confidence 467788999999999999996 4689999999865422 234799999999999999999988642 2 3679
Q ss_pred EEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 750 VYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 750 V~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
||||+++ ++.+.+...... ...+++..++.++.||++||+|||+
T Consensus 131 v~e~~~~-~l~~~~~~~~~~-----~~~l~~~~~~~~~~qi~~aL~~LH~ 174 (420)
T 1j1b_A 131 VLDYVPE-TVYRVARHYSRA-----KQTLPVIYVKLYMYQLFRSLAYIHS 174 (420)
T ss_dssp EEECCCE-EHHHHHHHHHHT-----TCCCCHHHHHHHHHHHHHHHHHHHT
T ss_pred ehhcccc-cHHHHHHHHhhc-----cCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999986 676666431100 1167888999999999999999995
No 384
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.28 E-value=5.9e-12 Score=134.59 Aligned_cols=116 Identities=18% Similarity=0.380 Sum_probs=85.7
Q ss_pred hcCCCCCCeecccCCeeEEEEEeC-CCcEEEEEEccccCh-hhHHH-HHHHHHHHHhCCCCcccceeEEEEECCEEEEEE
Q 003737 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSR-QGNRE-FVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 751 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~-f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 751 (799)
.++|+..+.||+|+||.||+|... +|+.||||++..... ....+ +..+..++..++||||+++++++.+.+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 356777889999999999999964 789999999976532 22233 444455788889999999999999999999999
Q ss_pred ecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 752 EYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 752 Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
||+ ++.+..+...... .+++..+..++.|+++||+|||+
T Consensus 104 e~~-~~~~~~l~~~~~~--------~~~~~~~~~~~~~i~~~l~~lH~ 142 (318)
T 2dyl_A 104 ELM-GTCAEKLKKRMQG--------PIPERILGKMTVAIVKALYYLKE 142 (318)
T ss_dssp CCC-SEEHHHHHHHHTS--------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ecc-CCcHHHHHHHhcc--------CCCHHHHHHHHHHHHHHHHHHHh
Confidence 999 4455555443221 57888999999999999999994
No 385
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.28 E-value=3.7e-12 Score=139.51 Aligned_cols=115 Identities=16% Similarity=0.202 Sum_probs=97.1
Q ss_pred cCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccChhhHHHHHHHHHHHHhCC-----------CCcccceeEEEEE
Q 003737 676 NNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQ-----------HPNLVKLYGCCVE 743 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-----------H~niv~l~g~~~~ 743 (799)
++|...+.||+|+||.||+|+. .+++.||||++... ....+.+.+|++++.+++ |+||+++++++..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~ 97 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH 97 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence 5688889999999999999995 57899999999753 334567889999999886 8999999999886
Q ss_pred CC----EEEEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 744 GN----QLLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 744 ~~----~~~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
.+ ..++||||+ +|+|.+++...... .+++..+..++.||+.||+|||+
T Consensus 98 ~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~-------~~~~~~~~~i~~qi~~aL~~lH~ 149 (373)
T 1q8y_A 98 KGPNGVHVVMVFEVL-GENLLALIKKYEHR-------GIPLIYVKQISKQLLLGLDYMHR 149 (373)
T ss_dssp EETTEEEEEEEECCC-CEEHHHHHHHTTTS-------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCceEEEEEecC-CCCHHHHHHHhhcc-------CCcHHHHHHHHHHHHHHHHHHHh
Confidence 54 789999999 89999999764322 47788899999999999999994
No 386
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=99.28 E-value=3.5e-12 Score=141.11 Aligned_cols=114 Identities=20% Similarity=0.339 Sum_probs=88.1
Q ss_pred cCCCCCCeecccCCeeEEEEEeCCCcEEEEEEccccChhhHHHHHHHHHHHHhCCCCcccceeEEEEECC------EEEE
Q 003737 676 NNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGN------QLLL 749 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~------~~~l 749 (799)
.+|...+.||+|+||.||+|....+..||+|++..... ...+|++++++++|||||++++++...+ ..++
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l 115 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNL 115 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEE
Confidence 34777899999999999999987666799998854322 1237999999999999999999986543 3789
Q ss_pred EEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 750 VYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 750 V~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
||||++++.+....+... ....+++..++.++.||++||+|||+
T Consensus 116 v~e~~~~~l~~~~~~~~~------~~~~~~~~~~~~~~~qi~~aL~~LH~ 159 (394)
T 4e7w_A 116 VLEYVPETVYRASRHYAK------LKQTMPMLLIKLYMYQLLRSLAYIHS 159 (394)
T ss_dssp EEECCSEEHHHHHHHHHH------TTSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EeeccCccHHHHHHHHHh------hcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999754443332111 01167888999999999999999994
No 387
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.28 E-value=5.9e-12 Score=141.18 Aligned_cols=116 Identities=18% Similarity=0.134 Sum_probs=88.6
Q ss_pred CCCCCeecccCCeeEEEEEeCCCcEEEEEEccccChhhHHHHHHHHHHHHhC-CCCcccceeEEEEECCEEEEEEecCCC
Q 003737 678 FDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQ-QHPNLVKLYGCCVEGNQLLLVYEYMKN 756 (799)
Q Consensus 678 f~~~~~lG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~Ey~~~ 756 (799)
|...+.||+|+||+||.+...+|+.||||++... ..+.+.+|++++.++ +|||||++++++.+.+..++||||+.
T Consensus 17 ~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~- 92 (434)
T 2rio_A 17 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN- 92 (434)
T ss_dssp EEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-
T ss_pred eeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-
Confidence 3445789999999998776678999999998653 235678999999876 89999999999999999999999996
Q ss_pred CcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 757 NCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 757 GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
|+|.+++......... .....+..+..++.||+.||+|||+
T Consensus 93 gsL~~~l~~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~ 133 (434)
T 2rio_A 93 LNLQDLVESKNVSDEN--LKLQKEYNPISLLRQIASGVAHLHS 133 (434)
T ss_dssp EEHHHHHHTC--------------CCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHhccCCCchh--hhhccchhHHHHHHHHHHHHHHHHH
Confidence 6999999865421110 0011233456679999999999994
No 388
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=99.27 E-value=1.2e-11 Score=139.97 Aligned_cols=114 Identities=21% Similarity=0.311 Sum_probs=95.6
Q ss_pred hcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccChhhHHHHHHHHHHHHhCCC-CcccceeEEEEECCEEEEEEe
Q 003737 675 TNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQH-PNLVKLYGCCVEGNQLLLVYE 752 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H-~niv~l~g~~~~~~~~~lV~E 752 (799)
.++|...+.||+|+||.||+|+. .+++.||||++..... ..++.+|++++..++| ++++.+..++...+..++|||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme 83 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD 83 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence 46788999999999999999995 6789999998765432 2358899999999987 556666677788899999999
Q ss_pred cCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 753 YMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 753 y~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
|+ +|+|.+++..... .+++..+..++.||+.||+|||+
T Consensus 84 ~~-g~sL~~ll~~~~~--------~l~~~~~~~i~~qi~~aL~yLH~ 121 (483)
T 3sv0_A 84 LL-GPSLEDLFNFCSR--------KLSLKTVLMLADQMINRVEFVHS 121 (483)
T ss_dssp CC-CCBHHHHHHHTTT--------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CC-CCCHHHHHHhhcC--------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 99 9999999975432 57888999999999999999994
No 389
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.27 E-value=9.6e-12 Score=134.98 Aligned_cols=116 Identities=13% Similarity=0.218 Sum_probs=96.5
Q ss_pred hcCCCCCCeecccCCeeEEEEEeC-CC-cEEEEEEccccChhhHHHHHHHHHHHHhCCCCc------ccceeEEEEECCE
Q 003737 675 TNNFDPANKVGEGGFGSVYKGILS-DG-TVIAVKQLSSKSRQGNREFVNEIGMISAQQHPN------LVKLYGCCVEGNQ 746 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~~~-~g-~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~n------iv~l~g~~~~~~~ 746 (799)
.++|...+.||+|+||.||+|... ++ +.||||+++.. ....+.+.+|++++.+++|++ ++.+.+++...+.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence 467888999999999999999853 44 78999999753 334567889999999988766 8999999999999
Q ss_pred EEEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 747 LLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 747 ~~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
.++||||+ +|++.+++...... .+++..+..++.||++||+|||+
T Consensus 97 ~~lv~e~~-~~~l~~~l~~~~~~-------~~~~~~~~~i~~qi~~~L~~lH~ 141 (355)
T 2eu9_A 97 MCIAFELL-GKNTFEFLKENNFQ-------PYPLPHVRHMAYQLCHALRFLHE 141 (355)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTC-------CCCHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEecc-CCChHHHHHhccCC-------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999 66777777654321 57888999999999999999996
No 390
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.26 E-value=9e-12 Score=137.19 Aligned_cols=119 Identities=17% Similarity=0.188 Sum_probs=99.2
Q ss_pred HHHhhcCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccChhhHHHHHHHHHHHHhCC-CC-----cccceeEEEEE
Q 003737 671 IKAATNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQ-HP-----NLVKLYGCCVE 743 (799)
Q Consensus 671 ~~~~t~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-H~-----niv~l~g~~~~ 743 (799)
.....++|...+.||+|+||.||+|.. .+++.||||+++.. ....+++.+|++++..++ |+ +|+++++++..
T Consensus 49 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~ 127 (382)
T 2vx3_A 49 GEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMF 127 (382)
T ss_dssp TCEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEE
T ss_pred CCEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeecc
Confidence 344567899999999999999999995 47889999999753 333567888998888875 55 49999999999
Q ss_pred CCEEEEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhc
Q 003737 744 GNQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFF 798 (799)
Q Consensus 744 ~~~~~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH 798 (799)
.+..++||||++ |+|.+++...... .+++..++.++.|++.||+|||
T Consensus 128 ~~~~~lv~e~~~-~~L~~~l~~~~~~-------~~~~~~~~~i~~qi~~al~~lH 174 (382)
T 2vx3_A 128 RNHLCLVFEMLS-YNLYDLLRNTNFR-------GVSLNLTRKFAQQMCTALLFLA 174 (382)
T ss_dssp TTEEEEEEECCC-CBHHHHHHHTTTS-------CCCHHHHHHHHHHHHHHHHHHT
T ss_pred CCceEEEEecCC-CCHHHHHhhcCcC-------CCCHHHHHHHHHHHHHHHHHhc
Confidence 999999999996 5999999865422 4778889999999999999999
No 391
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=99.24 E-value=8.1e-12 Score=136.96 Aligned_cols=114 Identities=9% Similarity=-0.046 Sum_probs=77.6
Q ss_pred cCCCCCCeecccCCeeEEEEEe-CCCcEEEEEEccccCh---hhHHHHHHHH---HHHHhCCCCccccee-------EEE
Q 003737 676 NNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSR---QGNREFVNEI---GMISAQQHPNLVKLY-------GCC 741 (799)
Q Consensus 676 ~~f~~~~~lG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~f~~E~---~~l~~l~H~niv~l~-------g~~ 741 (799)
..|...+.||+|+||.||+|.. .+|+.||||++..... ...+.+.+|+ +.+.+ +||||++++ +++
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehhe
Confidence 3477889999999999999995 4789999999977532 2345677885 45555 799988754 444
Q ss_pred EEC-----------------CEEEEEEecCCCCcHHHHHhcCcccccccccCCCChHHH------HHHHHHHHHHHhhhc
Q 003737 742 VEG-----------------NQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNI------QILIISAANNIDFFF 798 (799)
Q Consensus 742 ~~~-----------------~~~~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i------~~~~~qi~~gL~yLH 798 (799)
... ...++|||||+ |+|.++++..+. .+++... ..++.||++||+|||
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~--------~~~~~~~~~~~vk~~i~~qi~~aL~~LH 211 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF--------VYVFRGDEGILALHILTAQLIRLAANLQ 211 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH--------SCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc--------ccchhhhhhhhhHHHHHHHHHHHHHHHH
Confidence 433 33799999999 899999986532 2233233 455699999999999
Q ss_pred C
Q 003737 799 F 799 (799)
Q Consensus 799 ~ 799 (799)
+
T Consensus 212 ~ 212 (371)
T 3q60_A 212 S 212 (371)
T ss_dssp H
T ss_pred H
Confidence 4
No 392
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.20 E-value=3e-11 Score=131.05 Aligned_cols=103 Identities=20% Similarity=0.233 Sum_probs=71.0
Q ss_pred EEccCC-cCcCcCCcccCCCCCCCEEEeeC-CcCCCCCCccccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccCC
Q 003737 144 LSVMGN-RLSGPFPKVLTNITTLKNLSIEG-NLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDN 221 (799)
Q Consensus 144 L~Ls~N-~l~~~~p~~~~~L~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 221 (799)
++++++ +++ .+|. +..+++|++|+|++ |.|++..+..|.+|++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 13 v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 90 (347)
T 2ifg_A 13 LRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (347)
T ss_dssp EECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred EEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC
Confidence 455555 555 3565 77777777777775 7777665566777777777777777777777777777777777777777
Q ss_pred cCCCcCCccccCCCCCCEEEccCCCCCC
Q 003737 222 NFSGKIPEFIGKWKKIQKLHIQGSSLEG 249 (799)
Q Consensus 222 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 249 (799)
+|++..+..|..++ |+.|+|++|.+..
T Consensus 91 ~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 91 ALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp CCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred ccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 77765555555554 7777777777664
No 393
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.18 E-value=3.4e-11 Score=138.37 Aligned_cols=103 Identities=10% Similarity=0.064 Sum_probs=77.8
Q ss_pred CCCCeecccCCeeEEEEEeCCCcEEEEEEccccCh--------hhHHHHHHHHHHHHhCCCCcccceeEEEEECCEEEEE
Q 003737 679 DPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSR--------QGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLV 750 (799)
Q Consensus 679 ~~~~~lG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~--------~~~~~f~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 750 (799)
...+.||+|+||.||+|.. .++.+|+|+...... ...+.|.+|++++.+++||||+++..++...+..++|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 3467899999999999954 578889988643211 1135689999999999999999888888888888999
Q ss_pred EecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 751 YEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 751 ~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
|||+++|+|.++++. +..++.|+++||+|||+
T Consensus 418 mE~~~ggsL~~~l~~-----------------~~~i~~qi~~aL~~LH~ 449 (540)
T 3en9_A 418 MSYINGKLAKDVIED-----------------NLDIAYKIGEIVGKLHK 449 (540)
T ss_dssp EECCCSEEHHHHSTT-----------------CTHHHHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHH-----------------HHHHHHHHHHHHHHHHH
Confidence 999999999999874 22469999999999994
No 394
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.15 E-value=6.5e-11 Score=128.41 Aligned_cols=101 Identities=21% Similarity=0.215 Sum_probs=62.3
Q ss_pred EEeCCC-CCcccCCccccCCCCCCEEEccC-CcCCCcCcccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEEEeeCC
Q 003737 97 IALKAQ-NLTGTLPTELSKLRYLKQLDLSR-NCLTGSFSPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLSIEGN 173 (799)
Q Consensus 97 L~L~~~-~l~g~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N 173 (799)
++++++ +|+ .+|. |..+++|++|+|++ |.|++.++..|..+. |++|+|++|+|++..|..|.+|++|++|+|++|
T Consensus 13 v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 90 (347)
T 2ifg_A 13 LRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (347)
T ss_dssp EECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred EEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC
Confidence 456666 677 4777 88888888888885 888776666665554 666666666666555555566666666666666
Q ss_pred cCCCCCCccccCCCCCCEEEcccCcCC
Q 003737 174 LFTGSIPPDIRKLINLQKLILSSNSFT 200 (799)
Q Consensus 174 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 200 (799)
+|++..+..|..++ |++|+|++|.+.
T Consensus 91 ~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 91 ALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp CCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred ccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 55543333333333 555555555544
No 395
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.12 E-value=3.5e-12 Score=139.62 Aligned_cols=134 Identities=18% Similarity=0.213 Sum_probs=76.6
Q ss_pred CCCCEEEccCCcCCCcCccccccc------ceeEEEccCCcCcCcCCccc-CCCCCCCEEEeeCCcCCCCCCccc-----
Q 003737 116 RYLKQLDLSRNCLTGSFSPQWASL------QLVELSVMGNRLSGPFPKVL-TNITTLKNLSIEGNLFTGSIPPDI----- 183 (799)
Q Consensus 116 ~~L~~L~Ls~N~l~~~~p~~~~~l------~L~~L~Ls~N~l~~~~p~~~-~~L~~L~~L~Ls~N~l~~~~p~~~----- 183 (799)
+.|+.|+|++|.++......+... .|++|+|++|.++......+ ..+++|++|+|++|.++......+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 567777777777765433333221 37777777777654322222 234566777777776653322222
Q ss_pred cCCCCCCEEEcccCcCCc----cCChhccCCCCCCEEEccCCcCCCc----CCccccCCCCCCEEEccCCCCCC
Q 003737 184 RKLINLQKLILSSNSFTG----ELPAELTKLTNLNDLRISDNNFSGK----IPEFIGKWKKIQKLHIQGSSLEG 249 (799)
Q Consensus 184 ~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~ 249 (799)
...++|++|+|++|.++. .++..+..+++|++|+|++|.++.. ++..+...++|++|+|++|.++.
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~ 225 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGD 225 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCH
Confidence 234667777777777653 2344445666677777777766532 23445555666666666666653
No 396
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.11 E-value=2e-12 Score=141.67 Aligned_cols=167 Identities=16% Similarity=0.155 Sum_probs=126.2
Q ss_pred ccEEEEEeCCCCCcccCCccccC-----CCCCCEEEccCCcCCCcCccccc-ccc-eeEEEccCCcCcCcCCccc-----
Q 003737 92 CHVVTIALKAQNLTGTLPTELSK-----LRYLKQLDLSRNCLTGSFSPQWA-SLQ-LVELSVMGNRLSGPFPKVL----- 159 (799)
Q Consensus 92 ~~v~~L~L~~~~l~g~~p~~~~~-----l~~L~~L~Ls~N~l~~~~p~~~~-~l~-L~~L~Ls~N~l~~~~p~~~----- 159 (799)
.+++.|+|++|.++......+.. .++|++|+|++|.++......+. .+. |++|+|++|.++......+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 46889999999998644333332 27999999999999764433333 344 9999999999975544444
Q ss_pred CCCCCCCEEEeeCCcCCC----CCCccccCCCCCCEEEcccCcCCcc----CChhccCCCCCCEEEccCCcCCCc----C
Q 003737 160 TNITTLKNLSIEGNLFTG----SIPPDIRKLINLQKLILSSNSFTGE----LPAELTKLTNLNDLRISDNNFSGK----I 227 (799)
Q Consensus 160 ~~L~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~ 227 (799)
...++|++|+|++|.++. .++..+..+++|++|+|++|.++.. ++..+...++|++|+|++|.++.. +
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l 231 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALAL 231 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHH
Confidence 356899999999999864 2344557889999999999999842 456678888999999999999753 3
Q ss_pred CccccCCCCCCEEEccCCCCCCCCchhhhcC
Q 003737 228 PEFIGKWKKIQKLHIQGSSLEGPIPASISAL 258 (799)
Q Consensus 228 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 258 (799)
...+...++|++|+|++|.++......+..+
T Consensus 232 ~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~~ 262 (372)
T 3un9_A 232 ARAAREHPSLELLHLYFNELSSEGRQVLRDL 262 (372)
T ss_dssp HHHHHHCSSCCEEECTTSSCCHHHHHHHHHC
T ss_pred HHHHHhCCCCCEEeccCCCCCHHHHHHHHHH
Confidence 4455667899999999999886555555443
No 397
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.10 E-value=8.8e-11 Score=135.76 Aligned_cols=104 Identities=13% Similarity=0.005 Sum_probs=77.8
Q ss_pred ecccCCeeEEEEE-eCCCcEEEEEEccccC----------hhhHHHHHHHHHHHHhC-CCCcccceeEEEEECCEEEEEE
Q 003737 684 VGEGGFGSVYKGI-LSDGTVIAVKQLSSKS----------RQGNREFVNEIGMISAQ-QHPNLVKLYGCCVEGNQLLLVY 751 (799)
Q Consensus 684 lG~G~~g~Vy~~~-~~~g~~vAvK~l~~~~----------~~~~~~f~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~ 751 (799)
.+.|+.|.++++. .-.|+.+|||.+.... ....++|.+|+++|+++ .|+||+++++++.+++..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 4555555555443 2348889999996531 22346799999999999 7999999999999999999999
Q ss_pred ecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 752 EYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 752 Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
||++||+|.++|.+.+ .+++. .++.||+.||+|+|+
T Consensus 322 Eyv~G~~L~d~i~~~~---------~l~~~---~I~~QIl~AL~ylH~ 357 (569)
T 4azs_A 322 EKLPGRLLSDMLAAGE---------EIDRE---KILGSLLRSLAALEK 357 (569)
T ss_dssp ECCCSEEHHHHHHTTC---------CCCHH---HHHHHHHHHHHHHHH
T ss_pred ecCCCCcHHHHHHhCC---------CCCHH---HHHHHHHHHHHHHHH
Confidence 9999999999998765 34453 358999999999994
No 398
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.09 E-value=1.5e-10 Score=121.59 Aligned_cols=108 Identities=14% Similarity=0.053 Sum_probs=82.8
Q ss_pred HHhhcCCCCCCeecccCCeeEEEEEeCCCcEEEEEEccccCh------------------hhHHHHHHHHHHHHhCCCCc
Q 003737 672 KAATNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSR------------------QGNREFVNEIGMISAQQHPN 733 (799)
Q Consensus 672 ~~~t~~f~~~~~lG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~------------------~~~~~f~~E~~~l~~l~H~n 733 (799)
......|...+.||+|+||.||+|...+|+.||||.++.... .....+.+|++++.+++ |
T Consensus 86 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~ 163 (282)
T 1zar_A 86 VRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G 163 (282)
T ss_dssp HHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T
T ss_pred HhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C
Confidence 333445666789999999999999987799999999964321 13467999999999999 4
Q ss_pred ccceeEEEEECCEEEEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 734 LVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 734 iv~l~g~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
+++.+++.. +..++||||+++|+|.+ +.. .....++.||++||+|||+
T Consensus 164 -~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~---------------~~~~~i~~qi~~~l~~lH~ 211 (282)
T 1zar_A 164 -LAVPKVYAW-EGNAVLMELIDAKELYR-VRV---------------ENPDEVLDMILEEVAKFYH 211 (282)
T ss_dssp -SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC---------------SCHHHHHHHHHHHHHHHHH
T ss_pred -CCcCeEEec-cceEEEEEecCCCcHHH-cch---------------hhHHHHHHHHHHHHHHHHH
Confidence 666665543 55699999999999988 421 1234579999999999994
No 399
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.86 E-value=1.8e-09 Score=117.24 Aligned_cols=155 Identities=21% Similarity=0.259 Sum_probs=88.9
Q ss_pred hccCCCCCCEEEccCCcCCCcCCccccCCCCCCEEEccCCCCCCCCchhhh--cCCCCCeEEcCC--CC-CCCCCC----
Q 003737 206 ELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASIS--ALTSLTDLRISD--LK-GSESAF---- 276 (799)
Q Consensus 206 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~L~~--n~-~~~~~~---- 276 (799)
.+..+++|+.|+|++|.-. .++. +. +++|++|+|..+.+.......+. .+++|+.|+|+. ++ .....+
T Consensus 167 ll~~~P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~ 243 (362)
T 2ra8_A 167 VLDAMPLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFR 243 (362)
T ss_dssp HHHTCTTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTG
T ss_pred HHhcCCCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHH
Confidence 3444555555555554211 1222 22 45566666655555433222332 456666666542 11 001001
Q ss_pred CccC---CCCccEEEccCCcCcccCCccc---cCCCCCCeeccccccCCCC----CchhhhccCCCCEEeccCCcCCCcC
Q 003737 277 PKLD---KMNLKTLILTKCLIHGEIPDYI---GDMTKLKNIDLSFNNLTGG----IPTTFEKLAKTNFMYLTGNKLTGPV 346 (799)
Q Consensus 277 ~~l~---~~~L~~L~L~~N~l~~~~p~~l---~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~g~~ 346 (799)
+.+. .++|+.|+|.+|.+....+..+ ..+++|++|+|+.|.+++. ++..+..+++|+.|+|++|.++...
T Consensus 244 ~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~ 323 (362)
T 2ra8_A 244 PLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEM 323 (362)
T ss_dssp GGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHH
T ss_pred HHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHH
Confidence 1111 2689999999998875443333 2578999999999999864 3444567899999999999887543
Q ss_pred Chhhhc-CCCEEEeecCc
Q 003737 347 PKYIFN-SNKNVDISLNN 363 (799)
Q Consensus 347 p~~~~~-~l~~l~ls~N~ 363 (799)
-..+.. ....+|++.|.
T Consensus 324 ~~~l~~alg~~~~~~~~~ 341 (362)
T 2ra8_A 324 KKELQKSLPMKIDVSDSQ 341 (362)
T ss_dssp HHHHHHHCCSEEECCSBC
T ss_pred HHHHHHHcCCEEEecCCc
Confidence 333333 23678888876
No 400
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=98.77 E-value=1.2e-07 Score=104.42 Aligned_cols=169 Identities=9% Similarity=0.061 Sum_probs=89.1
Q ss_pred cEEEEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCcCcccccccc-eeEEEccCC---------------------c
Q 003737 93 HVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGN---------------------R 150 (799)
Q Consensus 93 ~v~~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N---------------------~ 150 (799)
+++++.+.. +++..-..+|.++++|+.++|..+ ++.+....|..+. |+.+.+..+ .
T Consensus 72 ~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~l~~i~~~aF~~~~~~~~~~~~~ 149 (394)
T 4fs7_A 72 KVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLMLKSIGVEAFKGCDFKEITIPEG 149 (394)
T ss_dssp TEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTTCCEECTTTTTTCCCSEEECCTT
T ss_pred CceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCceeeecceeeecccccccccCcc
Confidence 577777753 466444567888888888888654 4444444555543 444443322 1
Q ss_pred CcCcCCcccCCCCCCCEEEeeCCcCCCCCCccccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccCCcCCCcCCcc
Q 003737 151 LSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEF 230 (799)
Q Consensus 151 l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 230 (799)
....-...|.++++|+.+.+.++. ...-...|.++.+|+.+++..| ++..-...|.++..|+.+.+..+... +.+.
T Consensus 150 ~~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~--i~~~ 225 (394)
T 4fs7_A 150 VTVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY--LGDF 225 (394)
T ss_dssp CCEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE--ECTT
T ss_pred ccccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceE--eehh
Confidence 111223456666777777776543 2233345666677777776655 33333445666666666665544321 2222
Q ss_pred ccCCCCCCEEEccCCCCCCCCchhhhcCCCCCeEEcCC
Q 003737 231 IGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISD 268 (799)
Q Consensus 231 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 268 (799)
.....+|+.+.+..+ ++......+..+..|+.+.+..
T Consensus 226 ~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~ 262 (394)
T 4fs7_A 226 ALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQN 262 (394)
T ss_dssp TTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECC
T ss_pred hcccCCCceEEECCC-ceecccccccccccceeEEcCC
Confidence 333345555555432 2222234455566666666654
No 401
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=98.77 E-value=4.9e-09 Score=108.60 Aligned_cols=105 Identities=12% Similarity=0.107 Sum_probs=76.6
Q ss_pred CCCCCeecccCCeeEEEEEe-CCCcE--EEEEEccccChh------------------------hHHHHHHHHHHHHhCC
Q 003737 678 FDPANKVGEGGFGSVYKGIL-SDGTV--IAVKQLSSKSRQ------------------------GNREFVNEIGMISAQQ 730 (799)
Q Consensus 678 f~~~~~lG~G~~g~Vy~~~~-~~g~~--vAvK~l~~~~~~------------------------~~~~f~~E~~~l~~l~ 730 (799)
|+..+.||+|+||.||+|.. .+|+. ||||+++..... ....+.+|++.+.+++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 44568899999999999996 78988 999987543111 1236889999999998
Q ss_pred CCcc--cceeEEEEECCEEEEEEecCCC-C----cHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhc
Q 003737 731 HPNL--VKLYGCCVEGNQLLLVYEYMKN-N----CLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFF 798 (799)
Q Consensus 731 H~ni--v~l~g~~~~~~~~~lV~Ey~~~-G----sL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH 798 (799)
|+++ +.++++ +..++||||+.+ | +|.++.... ++..+..++.|++.||+|||
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~~------------~~~~~~~i~~qi~~~l~~lH 187 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGREL------------KELDVEGIFNDVVENVKRLY 187 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGGG------------GGSCHHHHHHHHHHHHHHHH
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhcc------------ChHHHHHHHHHHHHHHHHHH
Confidence 8865 333332 356899999942 4 677664321 13356778999999999999
No 402
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=98.72 E-value=5.9e-09 Score=115.84 Aligned_cols=122 Identities=9% Similarity=0.004 Sum_probs=80.6
Q ss_pred hcCCCCCCeecccCCeeEEEEE-eCCCcEEEEEEccccCh---hhHHHHHHHHHHHHhCCC-Cccccee-----------
Q 003737 675 TNNFDPANKVGEGGFGSVYKGI-LSDGTVIAVKQLSSKSR---QGNREFVNEIGMISAQQH-PNLVKLY----------- 738 (799)
Q Consensus 675 t~~f~~~~~lG~G~~g~Vy~~~-~~~g~~vAvK~l~~~~~---~~~~~f~~E~~~l~~l~H-~niv~l~----------- 738 (799)
+..|...+.||+|+||.||+|. ..+|+.||||++..... ...+.|.+|+.++..++| +|.....
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 3446677899999999999999 56799999999874322 235789999999999987 3221111
Q ss_pred ----------EEEEE-----CCEEEEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 739 ----------GCCVE-----GNQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 739 ----------g~~~~-----~~~~~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
.++.. ....+++|+++ +|+|.+++........ ....+++..+..++.||++||+|||+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~ 229 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSS--THKSLVHHARLQLTLQVIRLLASLHH 229 (413)
T ss_dssp EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTT--TSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccc--cCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 11111 12346666655 6899999852110000 00135566777778999999999994
No 403
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.69 E-value=2.8e-09 Score=115.69 Aligned_cols=208 Identities=17% Similarity=0.170 Sum_probs=93.3
Q ss_pred cccEEEEEeCCCCCcc-cC-------CccccCCCCCCEEEccCCcCCCcCcccccccceeEEEccCCcCcCcCCcccCCC
Q 003737 91 TCHVVTIALKAQNLTG-TL-------PTELSKLRYLKQLDLSRNCLTGSFSPQWASLQLVELSVMGNRLSGPFPKVLTNI 162 (799)
Q Consensus 91 ~~~v~~L~L~~~~l~g-~~-------p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~L~~L~Ls~N~l~~~~p~~~~~L 162 (799)
..+|+.|.+......| .. ..++..+++|+.|.+..+...... +++.. .+.+...+..+
T Consensus 106 ~~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~-------------is~~~-~~~L~~ll~~~ 171 (362)
T 2ra8_A 106 LPSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQE-------------ISWIE-QVDLSPVLDAM 171 (362)
T ss_dssp GGGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCC-------------GGGCB-CCBCHHHHHTC
T ss_pred chhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcc-------------ccccc-ccCHHHHHhcC
Confidence 4578888888776553 21 334566789999988765332100 00000 01122333444
Q ss_pred CCCCEEEeeCCcCCCCCCccccCCCCCCEEEcccCcCCccCChhcc--CCCCCCEEEccC--CcCCCc-----CCccc--
Q 003737 163 TTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELT--KLTNLNDLRISD--NNFSGK-----IPEFI-- 231 (799)
Q Consensus 163 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls~--N~l~~~-----~p~~~-- 231 (799)
++|+.|+|++|.-. .++. +. +++|++|+|..|.++......+. .+++|++|+|+. |...+. +...+
T Consensus 172 P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~ 248 (362)
T 2ra8_A 172 PLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSK 248 (362)
T ss_dssp TTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCT
T ss_pred CCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhc
Confidence 55555555554211 1222 22 45555555555544422222222 455555555532 111110 00111
Q ss_pred cCCCCCCEEEccCCCCCCCCchhhh---cCCCCCeEEcCCCCCCCCC---CCc-cCC-CCccEEEccCCcCcccCCcccc
Q 003737 232 GKWKKIQKLHIQGSSLEGPIPASIS---ALTSLTDLRISDLKGSESA---FPK-LDK-MNLKTLILTKCLIHGEIPDYIG 303 (799)
Q Consensus 232 ~~l~~L~~L~L~~N~l~~~~p~~~~---~l~~L~~L~L~~n~~~~~~---~~~-l~~-~~L~~L~L~~N~l~~~~p~~l~ 303 (799)
..+++|++|+|.+|.+....+..+. .+++|+.|+|+.|.+.... ++. +.. ++|+.|+|++|.++...-..+.
T Consensus 249 ~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~ 328 (362)
T 2ra8_A 249 DRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQ 328 (362)
T ss_dssp TTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHH
T ss_pred CCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHH
Confidence 1345566666655555432222222 2455666666553332211 111 122 4667777777766533222222
Q ss_pred C-CCCCCeecccccc
Q 003737 304 D-MTKLKNIDLSFNN 317 (799)
Q Consensus 304 ~-l~~L~~L~Ls~N~ 317 (799)
. + ...++++.|+
T Consensus 329 ~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 329 KSL--PMKIDVSDSQ 341 (362)
T ss_dssp HHC--CSEEECCSBC
T ss_pred HHc--CCEEEecCCc
Confidence 1 1 3457777776
No 404
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.55 E-value=9.4e-07 Score=97.30 Aligned_cols=261 Identities=12% Similarity=0.135 Sum_probs=150.3
Q ss_pred EEEEEeCCCCCcccCCccccCCCCCCEEEccCCc---CCCcCcccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEEE
Q 003737 94 VVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNC---LTGSFSPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLS 169 (799)
Q Consensus 94 v~~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~---l~~~~p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~ 169 (799)
++++.+.. .++..-..+|.++++|+.+.+..|. ++.+-..+|.... |+.+.+..+ ++......|.++.+|+.+.
T Consensus 66 L~sI~iP~-svt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~i~ 143 (394)
T 4gt6_A 66 LTSVQIPD-TVTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDTVT 143 (394)
T ss_dssp CCEEEECT-TCCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCEEE
T ss_pred CEEEEECC-CeeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhhccccccc
Confidence 55555543 2444445567788888888877653 4444455666554 666655443 4434455677777777777
Q ss_pred eeCCcCCCCCCccccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccCCcCCCcCCccccCCCCCCEEEccCCC---
Q 003737 170 IEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSS--- 246 (799)
Q Consensus 170 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~--- 246 (799)
+..+ +.......|..+.+|+.+.+..+ ++..-...|. ..+|+.+.+..+-.. .-...|..+.++.......+.
T Consensus 144 lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~-~~~l~~i~ip~~~~~-i~~~af~~c~~l~~~~~~~~~~~~ 219 (394)
T 4gt6_A 144 IPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFT-GTALTQIHIPAKVTR-IGTNAFSECFALSTITSDSESYPA 219 (394)
T ss_dssp CCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTT-TCCCSEEEECTTCCE-ECTTTTTTCTTCCEEEECCSSSCB
T ss_pred ccce-eeeecccceecccccccccccce-eeEecccccc-ccceeEEEECCcccc-cccchhhhccccceeccccccccc
Confidence 7644 23233445667777777777544 2212222332 245666655443221 223334444444443322211
Q ss_pred ---------------------------------CCCCCchhhhcCCCCCeEEcCCCCCCCCCCCccCC-CCccEEEccCC
Q 003737 247 ---------------------------------LEGPIPASISALTSLTDLRISDLKGSESAFPKLDK-MNLKTLILTKC 292 (799)
Q Consensus 247 ---------------------------------l~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~l~~-~~L~~L~L~~N 292 (799)
++..-...|.++.+|+.+.+.+ ......-..+.. .+|+.+.+. +
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~v~~i~~~aF~~c~~L~~i~lp~-~~~~I~~~aF~~c~~L~~i~l~-~ 297 (394)
T 4gt6_A 220 IDNVLYEKSANGDYALIRYPSQREDPAFKIPNGVARIETHAFDSCAYLASVKMPD-SVVSIGTGAFMNCPALQDIEFS-S 297 (394)
T ss_dssp SSSCEEEECTTSCEEEEECCTTCCCSEEECCTTEEEECTTTTTTCSSCCEEECCT-TCCEECTTTTTTCTTCCEEECC-T
T ss_pred ccceeecccccccccccccccccccceEEcCCcceEcccceeeecccccEEeccc-ccceecCcccccccccccccCC-C
Confidence 1111234567778888888765 222222222444 678888885 4
Q ss_pred cCcccCCccccCCCCCCeeccccccCCCCCchhhhccCCCCEEeccCCcCCCcCChhhhc---CCCEEEeecCcCc
Q 003737 293 LIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIFN---SNKNVDISLNNFT 365 (799)
Q Consensus 293 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~---~l~~l~ls~N~~~ 365 (799)
.++..-...|.++.+|+.++|..+ ++..-..+|.++.+|+.+.+..+ ++ .|....|. +|+.+++..|...
T Consensus 298 ~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~-~I~~~aF~~C~~L~~i~~~~~~~~ 370 (394)
T 4gt6_A 298 RITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VT-KIPESAFSNCTALNNIEYSGSRSQ 370 (394)
T ss_dssp TCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CC-BCCGGGGTTCTTCCEEEESSCHHH
T ss_pred cccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cC-EEhHhHhhCCCCCCEEEECCceee
Confidence 555455567888888888888765 66555678888888988888654 55 56655443 5788888877544
No 405
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=98.46 E-value=1.7e-06 Score=95.19 Aligned_cols=217 Identities=14% Similarity=0.113 Sum_probs=140.2
Q ss_pred cccccccc-eeEEEccCCcCcCcCCcccCCCCCCCEEEeeCCcCCCCCCccccCCCCCCEEEcccCcCCccCChhccCCC
Q 003737 133 SPQWASLQ-LVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLT 211 (799)
Q Consensus 133 p~~~~~l~-L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 211 (799)
...|..+. |+.+.+.++. .......|.++++|+.+++..| ++..-...|.++..|+.+.+..+... +.+.+....
T Consensus 155 ~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~--i~~~~~~~~ 230 (394)
T 4fs7_A 155 DEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY--LGDFALSKT 230 (394)
T ss_dssp TTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE--ECTTTTTTC
T ss_pred hhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceE--eehhhcccC
Confidence 45566665 8888876553 3355567778888888888766 44344456777888888877665433 333444556
Q ss_pred CCCEEEccCCcCCCcCCccccCCCCCCEEEccCCCCCCCCchhhhcCCCCCeEEcCCCCCCCCCCCccCC-CCccEEEcc
Q 003737 212 NLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDK-MNLKTLILT 290 (799)
Q Consensus 212 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~l~~-~~L~~L~L~ 290 (799)
+|+.+.+..+ ++..-...|..+..|+.+.+..+..+ .....|..+..++.+.......... .+.. .+|+.+.+.
T Consensus 231 ~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~~~---~F~~~~~L~~i~l~ 305 (394)
T 4fs7_A 231 GVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVPEK---TFYGCSSLTEVKLL 305 (394)
T ss_dssp CCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEECTT---TTTTCTTCCEEEEC
T ss_pred CCceEEECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeeccc---cccccccccccccc
Confidence 7777777543 23234456677788888888766443 4455667777777776654221111 1222 577788776
Q ss_pred CCcCcccCCccccCCCCCCeeccccccCCCCCchhhhccCCCCEEeccCCcCCCcCChhhh---cCCCEEEeecC
Q 003737 291 KCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIF---NSNKNVDISLN 362 (799)
Q Consensus 291 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~---~~l~~l~ls~N 362 (799)
.+ ++..-...|.++++|+.++|..+ ++..-..+|.++.+|+.+.+..| ++ .++...| .+|+.+++..+
T Consensus 306 ~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 306 DS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LR-KIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp TT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CC-EECTTTBTTCTTCCEEEEEGG
T ss_pred cc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-cc-EehHHHhhCCCCCCEEEECCC
Confidence 54 55455667888888888888754 66556678888888888888776 55 4555444 25778888765
No 406
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=98.44 E-value=4.1e-08 Score=106.44 Aligned_cols=105 Identities=9% Similarity=-0.010 Sum_probs=70.3
Q ss_pred CCCCCeecccCCeeEEEEEeCCCcEEEEEEccccCh--------------hhHHH--------HHHHHHHHHhCCCCccc
Q 003737 678 FDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSR--------------QGNRE--------FVNEIGMISAQQHPNLV 735 (799)
Q Consensus 678 f~~~~~lG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~--------------~~~~~--------f~~E~~~l~~l~H~niv 735 (799)
|+....||+|+||.||+|..++|+.||||+++.... ..... ..+|...|.++.+..+.
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~ 176 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFP 176 (397)
T ss_dssp SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 677889999999999999988899999998754210 00111 23456666666554443
Q ss_pred ceeEEEEECCEEEEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 736 KLYGCCVEGNQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 736 ~l~g~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
...-+.... .+|||||+++++|.++.. . ++...++.|++.+|.|||+
T Consensus 177 vp~p~~~~~--~~LVME~i~G~~L~~l~~-------------~--~~~~~l~~qll~~l~~lH~ 223 (397)
T 4gyi_A 177 VPEPIAQSR--HTIVMSLVDALPMRQVSS-------------V--PDPASLYADLIALILRLAK 223 (397)
T ss_dssp CCCEEEEET--TEEEEECCSCEEGGGCCC-------------C--SCHHHHHHHHHHHHHHHHH
T ss_pred CCeeeeccC--ceEEEEecCCccHhhhcc-------------c--HHHHHHHHHHHHHHHHHHH
Confidence 222222222 379999999988865421 1 1345568999999999994
No 407
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.37 E-value=8.8e-06 Score=89.47 Aligned_cols=257 Identities=11% Similarity=0.144 Sum_probs=172.7
Q ss_pred CccccCCC-CCCEEEccCCcCCCcCcccccccc-eeEEEccCCc---CcCcCCcccCCCCCCCEEEeeCCcCCCCCCccc
Q 003737 109 PTELSKLR-YLKQLDLSRNCLTGSFSPQWASLQ-LVELSVMGNR---LSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDI 183 (799)
Q Consensus 109 p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~-L~~L~Ls~N~---l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~ 183 (799)
..+|.+.+ .|+.+.+..+ ++.+-..+|..+. |+.+.+..|. ++.+-...|.++.+|+.+.+..+ ++..-...|
T Consensus 56 ~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF 133 (394)
T 4gt6_A 56 DRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAF 133 (394)
T ss_dssp TTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTT
T ss_pred HhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhh
Confidence 44677774 5999999754 7767778888877 9999998774 55555678888999998877655 443445578
Q ss_pred cCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccCCcCCCcCCccccCCCCCCEEEccCCCCCCCCchhhhcCCCCCe
Q 003737 184 RKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTD 263 (799)
Q Consensus 184 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 263 (799)
..+.+|+.+.+..+ +...-...|..+.+|+.+.+..+ ++..-...|. ..+|+.+.+..+-.. .....|..+.+++.
T Consensus 134 ~~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~-~~~l~~i~ip~~~~~-i~~~af~~c~~l~~ 209 (394)
T 4gt6_A 134 HHCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFT-GTALTQIHIPAKVTR-IGTNAFSECFALST 209 (394)
T ss_dssp TTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTT-TCCCSEEEECTTCCE-ECTTTTTTCTTCCE
T ss_pred hhhcccccccccce-eeeecccceecccccccccccce-eeEecccccc-ccceeEEEECCcccc-cccchhhhccccce
Confidence 88999999999754 33344567888999999999765 4433344554 467898888755332 33455666666666
Q ss_pred EEcCCCCCC---------------------------CCCCC---------ccCC-CCccEEEccCCcCcccCCccccCCC
Q 003737 264 LRISDLKGS---------------------------ESAFP---------KLDK-MNLKTLILTKCLIHGEIPDYIGDMT 306 (799)
Q Consensus 264 L~L~~n~~~---------------------------~~~~~---------~l~~-~~L~~L~L~~N~l~~~~p~~l~~l~ 306 (799)
......... ...+| .+.. ..|+.+.+..+..+ .....|.+++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~ 288 (394)
T 4gt6_A 210 ITSDSESYPAIDNVLYEKSANGDYALIRYPSQREDPAFKIPNGVARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCP 288 (394)
T ss_dssp EEECCSSSCBSSSCEEEECTTSCEEEEECCTTCCCSEEECCTTEEEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCT
T ss_pred ecccccccccccceeecccccccccccccccccccceEEcCCcceEcccceeeecccccEEecccccce-ecCccccccc
Confidence 554321110 00112 1333 57888888765433 4556788999
Q ss_pred CCCeeccccccCCCCCchhhhccCCCCEEeccCCcCCCcCChhhh---cCCCEEEeecCcCcccCCC-CC-cCCCC
Q 003737 307 KLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIF---NSNKNVDISLNNFTWESSD-PI-ECPRG 377 (799)
Q Consensus 307 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~---~~l~~l~ls~N~~~g~~p~-~~-~~~~~ 377 (799)
+|+.+.+. +.++.....+|.++.+|+.+.+..+ ++ .|.+..| .+|+.+.+..+ ++ .|.. .+ .|..+
T Consensus 289 ~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~C~~L~~i~ip~s-v~-~I~~~aF~~C~~L 359 (394)
T 4gt6_A 289 ALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-IT-QILDDAFAGCEQLERIAIPSS-VT-KIPESAFSNCTAL 359 (394)
T ss_dssp TCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCEEEECTT-CC-BCCGGGGTTCTTC
T ss_pred ccccccCC-CcccccCceeecCCCCcCEEEeCCc-cc-EehHhHhhCCCCCCEEEECcc-cC-EEhHhHhhCCCCC
Confidence 99999996 5676666778999999999999865 55 4555444 35889999755 43 3332 23 56554
No 408
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.31 E-value=8.4e-08 Score=98.93 Aligned_cols=78 Identities=27% Similarity=0.322 Sum_probs=35.1
Q ss_pred CCCCEEEcccCcCCc--cCChhccCCCCCCEEEccCCcCCCcCCccccCCC--CCCEEEccCCCCCCCCc-------hhh
Q 003737 187 INLQKLILSSNSFTG--ELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWK--KIQKLHIQGSSLEGPIP-------ASI 255 (799)
Q Consensus 187 ~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~L~~N~l~~~~p-------~~~ 255 (799)
++|++|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.+.+.+| ..+
T Consensus 170 ~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il 247 (267)
T 3rw6_A 170 PELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIR 247 (267)
T ss_dssp TTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHH
T ss_pred CCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHHHHH
Confidence 334444444444433 2233334444444444444444432 1122222 55555555555554333 235
Q ss_pred hcCCCCCeEEc
Q 003737 256 SALTSLTDLRI 266 (799)
Q Consensus 256 ~~l~~L~~L~L 266 (799)
..+++|+.||-
T Consensus 248 ~~~P~L~~LDg 258 (267)
T 3rw6_A 248 ERFPKLLRLDG 258 (267)
T ss_dssp HHCTTCCEESS
T ss_pred HHCcccCeECC
Confidence 56677776653
No 409
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.28 E-value=1.9e-05 Score=86.23 Aligned_cols=257 Identities=14% Similarity=0.130 Sum_probs=152.9
Q ss_pred cEEEEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCcCcccccccceeEEEccCCcCcCcCCcccCCCCCCCEEEeeC
Q 003737 93 HVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQLVELSVMGNRLSGPFPKVLTNITTLKNLSIEG 172 (799)
Q Consensus 93 ~v~~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~ 172 (799)
+++++.+. .+++..-..+|.++.+|+.++|..+ ++.+-..+|...+|+.+.+..+ ++..-...|.. .+|+.+.+..
T Consensus 47 ~i~~v~ip-~~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c~l~~i~~~~~-l~~I~~~aF~~-~~L~~i~lp~ 122 (379)
T 4h09_A 47 RISEVRVN-SGITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADTKLQSYTGMER-VKKFGDYVFQG-TDLDDFEFPG 122 (379)
T ss_dssp GCSEEEEC-TTEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTCCCCEEEECTT-CCEECTTTTTT-CCCSEEECCT
T ss_pred CCEEEEeC-CCccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCCCCceEECCce-eeEeccceecc-CCcccccCCC
Confidence 46666664 3455445567888889999988654 6666667777777777776543 44344445554 3677777765
Q ss_pred CcCCCCCCccccCCCCCCEEEcccCcCCccCChhccCCCCCCEEEccCCc------------------------------
Q 003737 173 NLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNN------------------------------ 222 (799)
Q Consensus 173 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~------------------------------ 222 (799)
+. +..-...|.+ .+|+.+.+..+ ++..-...|..+.+++.+.+..+.
T Consensus 123 ~~-~~i~~~~F~~-~~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (379)
T 4h09_A 123 AT-TEIGNYIFYN-SSVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTEF 199 (379)
T ss_dssp TC-CEECTTTTTT-CCCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSEE
T ss_pred cc-cccccccccc-ceeeeeeccce-eeccccchhcccccccccccccccceeecccceecccccceecccccccccccc
Confidence 42 2111222322 23444443322 222223334444444444433221
Q ss_pred -----CCCcCCccccCCCCCCEEEccCCCCCCCCchhhhcCCCCCeEEcCCCCCCCCCCCccCC-CCccEEEccCCcCcc
Q 003737 223 -----FSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDK-MNLKTLILTKCLIHG 296 (799)
Q Consensus 223 -----l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~l~~-~~L~~L~L~~N~l~~ 296 (799)
........+....+|+.+.+..+ +.......|.++..|+.+.+.+ +.....-..+.. .+|+.+.+..+ ++.
T Consensus 200 ~~~~~~~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~-~v~~I~~~aF~~~~~l~~i~l~~~-i~~ 276 (379)
T 4h09_A 200 TIPSTVKTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPK-NVTSIGSFLLQNCTALKTLNFYAK-VKT 276 (379)
T ss_dssp ECCTTCCEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECT-TCCEECTTTTTTCTTCCEEEECCC-CSE
T ss_pred ccccceeEEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCC-CccEeCccccceeehhcccccccc-cee
Confidence 11122344556778888888654 3434456677888888888865 332222223444 67888888644 554
Q ss_pred cCCccccCCCCCCeeccccccCCCCCchhhhccCCCCEEeccCCcCCCcCChhhhc---CCCEEEeec
Q 003737 297 EIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIFN---SNKNVDISL 361 (799)
Q Consensus 297 ~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~g~~p~~~~~---~l~~l~ls~ 361 (799)
.....|.++++|+.+++.++.++..-..+|.++.+|+.+.|..+ ++ .|....|. +|+.+++..
T Consensus 277 i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~C~~L~~i~ip~ 342 (379)
T 4h09_A 277 VPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LK-TIQVYAFKNCKALSTISYPK 342 (379)
T ss_dssp ECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCCCCCCT
T ss_pred ccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-cc-EEHHHHhhCCCCCCEEEECC
Confidence 55567888899999999988888777788999999999999754 55 45554432 456666543
No 410
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.19 E-value=3.6e-07 Score=89.31 Aligned_cols=64 Identities=20% Similarity=0.245 Sum_probs=27.9
Q ss_pred CCCCCCEEEcccCcCCcc----CChhccCCCCCCEEEccCCcCCCc----CCccccCCCCCCEEEc--cCCCCC
Q 003737 185 KLINLQKLILSSNSFTGE----LPAELTKLTNLNDLRISDNNFSGK----IPEFIGKWKKIQKLHI--QGSSLE 248 (799)
Q Consensus 185 ~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L--~~N~l~ 248 (799)
..++|++|+|++|.+... +...+...++|++|+|++|.|... +...+...++|++|+| ++|.+.
T Consensus 63 ~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~ 136 (185)
T 1io0_A 63 TNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLG 136 (185)
T ss_dssp TCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCC
T ss_pred hCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCC
Confidence 334445555555544321 222333334455555555554421 2333344444555555 445444
No 411
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.18 E-value=2.2e-07 Score=90.84 Aligned_cols=24 Identities=17% Similarity=0.093 Sum_probs=16.9
Q ss_pred cCCccccCCCCCCEEEccCC-cCCC
Q 003737 107 TLPTELSKLRYLKQLDLSRN-CLTG 130 (799)
Q Consensus 107 ~~p~~~~~l~~L~~L~Ls~N-~l~~ 130 (799)
.+...+...+.|++|+|++| .+..
T Consensus 27 ~l~~~l~~~~~L~~L~L~~n~~i~~ 51 (185)
T 1io0_A 27 TLKRIQNNDPDLEEVNLNNIMNIPV 51 (185)
T ss_dssp HHHHHHTTCTTCCEEECTTCTTCCH
T ss_pred HHHHHHhcCCCCCEEEecCCCCCCH
Confidence 34455677788888888887 7763
No 412
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.16 E-value=1.5e-06 Score=89.54 Aligned_cols=96 Identities=26% Similarity=0.394 Sum_probs=73.8
Q ss_pred EEccCCcCc---CcCCcccCCCCCCCEEEeeCCcCCC--CCCccccCCCCCCEEEcccCcCCccCChhccCCC--CCCEE
Q 003737 144 LSVMGNRLS---GPFPKVLTNITTLKNLSIEGNLFTG--SIPPDIRKLINLQKLILSSNSFTGELPAELTKLT--NLNDL 216 (799)
Q Consensus 144 L~Ls~N~l~---~~~p~~~~~L~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L 216 (799)
++++.|... +.++....++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|++++. ..+..++ +|++|
T Consensus 148 l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L 225 (267)
T 3rw6_A 148 IDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEEL 225 (267)
T ss_dssp CCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEE
T ss_pred ccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceE
Confidence 667777432 2222233568999999999999997 4567778999999999999999965 3344444 99999
Q ss_pred EccCCcCCCcCCc-------cccCCCCCCEEE
Q 003737 217 RISDNNFSGKIPE-------FIGKWKKIQKLH 241 (799)
Q Consensus 217 ~Ls~N~l~~~~p~-------~~~~l~~L~~L~ 241 (799)
+|++|.+.+.+|+ .+..+++|+.||
T Consensus 226 ~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 226 WLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp ECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred EccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 9999999887763 467889999886
No 413
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=97.96 E-value=2.2e-05 Score=80.79 Aligned_cols=112 Identities=13% Similarity=0.020 Sum_probs=85.5
Q ss_pred HhhcCCCCCCeecccCCeeEEEEEeCCCcEEEEEEccccChhhHHHHHHHHHHHHhCC-CCcccceeEEEEECCEEEEEE
Q 003737 673 AATNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQ-HPNLVKLYGCCVEGNQLLLVY 751 (799)
Q Consensus 673 ~~t~~f~~~~~lG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~ 751 (799)
....+|......+.|+.+.||+.... +..+++|............+.+|++++..+. |..+.++++++...+..|+||
T Consensus 11 ~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~ 89 (263)
T 3tm0_A 11 KLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLM 89 (263)
T ss_dssp HHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEE
T ss_pred HHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEE
Confidence 34456777777888888999999854 6789999986532223346889999999884 677889999999999999999
Q ss_pred ecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 752 EYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 752 Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
||++|.+|.+.+.. ......++.+++++++.||.
T Consensus 90 e~i~G~~l~~~~~~--------------~~~~~~~~~~l~~~l~~LH~ 123 (263)
T 3tm0_A 90 SEADGVLCSEEYED--------------EQSPEKIIELYAECIRLFHS 123 (263)
T ss_dssp ECCSSEEHHHHCCT--------------TTCHHHHHHHHHHHHHHHHH
T ss_pred EecCCeehhhccCC--------------cccHHHHHHHHHHHHHHHhC
Confidence 99999999876321 11223458899999999983
No 414
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=97.84 E-value=0.00056 Score=74.39 Aligned_cols=240 Identities=15% Similarity=0.098 Sum_probs=151.5
Q ss_pred cEEEEEeCCCCCcccCCccccCCCCCCEEEccCCcCCCcCcccccccceeEEEccCCcCcCcCCcccCCCCCCCEEEeeC
Q 003737 93 HVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQLVELSVMGNRLSGPFPKVLTNITTLKNLSIEG 172 (799)
Q Consensus 93 ~v~~L~L~~~~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~ 172 (799)
++++++|.. +++..-..+|.+. .|+.+.+..+ ++.+....|...+|+.+.+..+- ...-...|.+. +|+.+.+..
T Consensus 70 ~L~~I~lp~-~v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~~~L~~i~lp~~~-~~i~~~~F~~~-~l~~~~~~~ 144 (379)
T 4h09_A 70 NMTKVTVAS-TVTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQGTDLDDFEFPGAT-TEIGNYIFYNS-SVKRIVIPK 144 (379)
T ss_dssp TCCEEEECT-TCCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTTCCCSEEECCTTC-CEECTTTTTTC-CCCEEEECT
T ss_pred CCCEEEeCC-cceEechhhhcCC-CCceEECCce-eeEeccceeccCCcccccCCCcc-ccccccccccc-eeeeeeccc
Confidence 578888864 3664445566665 5777776543 44444555655567777775442 21222233322 344443332
Q ss_pred CcCCCCCCccccCCCCCCEEEcccCc-----------------------------------CCccCChhccCCCCCCEEE
Q 003737 173 NLFTGSIPPDIRKLINLQKLILSSNS-----------------------------------FTGELPAELTKLTNLNDLR 217 (799)
Q Consensus 173 N~l~~~~p~~~~~l~~L~~L~Ls~N~-----------------------------------l~~~~p~~~~~l~~L~~L~ 217 (799)
+ ++..-...|....+++.+.+..+. ........+....+|+.+.
T Consensus 145 ~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f~~~~~l~~i~ 223 (379)
T 4h09_A 145 S-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTEFTIPSTVKTVTAYGFSYGKNLKKIT 223 (379)
T ss_dssp T-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSEEECCTTCCEECTTTTTTCSSCSEEE
T ss_pred e-eeccccchhcccccccccccccccceeecccceecccccceeccccccccccccccccceeEEeecccccccccceee
Confidence 2 221222233334444433332211 1112334566778899998
Q ss_pred ccCCcCCCcCCccccCCCCCCEEEccCCCCCCCCchhhhcCCCCCeEEcCCCCCCCCCCCccCC-CCccEEEccCCcCcc
Q 003737 218 ISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDK-MNLKTLILTKCLIHG 296 (799)
Q Consensus 218 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~n~~~~~~~~~l~~-~~L~~L~L~~N~l~~ 296 (799)
+..+ +.......|.++..|+.+.+..+ ++..-...|.++.+|+.+.+.. +........+.. .+|+.+.+.++.++.
T Consensus 224 ~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~-~i~~i~~~aF~~c~~L~~i~l~~~~i~~ 300 (379)
T 4h09_A 224 ITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYA-KVKTVPYLLCSGCSNLTKVVMDNSAIET 300 (379)
T ss_dssp CCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECC-CCSEECTTTTTTCTTCCEEEECCTTCCE
T ss_pred eccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhccccccc-cceeccccccccccccccccccccccce
Confidence 8665 44355667888999999999766 5555567788899999999875 333322333555 789999999998887
Q ss_pred cCCccccCCCCCCeeccccccCCCCCchhhhccCCCCEEeccCCcCC
Q 003737 297 EIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLT 343 (799)
Q Consensus 297 ~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 343 (799)
.-...|.++.+|+.++|..+ ++..-..+|.++++|+.+.+..+ ++
T Consensus 301 I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~ 345 (379)
T 4h09_A 301 LEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-IT 345 (379)
T ss_dssp ECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CC
T ss_pred ehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cC
Confidence 77788999999999999765 76566778999999999988654 44
No 415
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.46 E-value=6.8e-05 Score=71.70 Aligned_cols=84 Identities=10% Similarity=0.127 Sum_probs=44.5
Q ss_pred CCCCEEEeeCCcCCCCCCccccCCCCCCEEEcccCc-CCccCChhccCC----CCCCEEEccCCc-CCCcCCccccCCCC
Q 003737 163 TTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNS-FTGELPAELTKL----TNLNDLRISDNN-FSGKIPEFIGKWKK 236 (799)
Q Consensus 163 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l----~~L~~L~Ls~N~-l~~~~p~~~~~l~~ 236 (799)
-+|+.||++++.++..--..+..+++|++|+|++|. ++..--..+..+ ++|++|+|++|. ++..--..+.++++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 357777777776654333445666677777776664 443222223332 246666666653 44322233445555
Q ss_pred CCEEEccCCC
Q 003737 237 IQKLHIQGSS 246 (799)
Q Consensus 237 L~~L~L~~N~ 246 (799)
|++|+|+++.
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 5555555553
No 416
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=97.45 E-value=0.00013 Score=74.54 Aligned_cols=103 Identities=14% Similarity=0.017 Sum_probs=73.7
Q ss_pred CCCCCCeecccCCeeEEEEEeCCCcEEEEEEccccChhhHHHHHHHHHHHHhCCCCc--ccceeEEEEECCEEEEEEecC
Q 003737 677 NFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPN--LVKLYGCCVEGNQLLLVYEYM 754 (799)
Q Consensus 677 ~f~~~~~lG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~n--iv~l~g~~~~~~~~~lV~Ey~ 754 (799)
++....+.+.|..+.||+....+|..+++|..... ....+.+|++++..+++.+ +.+++++...++..++||||+
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i 97 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEV 97 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECC
T ss_pred CCceEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEec
Confidence 34333333456679999998777888999997653 2245788999999886545 456888888777899999999
Q ss_pred CCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 755 KNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 755 ~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
++.++. .... ....++.++++.|+.||.
T Consensus 98 ~G~~l~--~~~~---------------~~~~~~~~l~~~l~~lh~ 125 (264)
T 1nd4_A 98 PGQDLL--SSHL---------------APAEKVSIMADAMRRLHT 125 (264)
T ss_dssp SSEETT--TSCC---------------CHHHHHHHHHHHHHHHTT
T ss_pred CCcccC--cCcC---------------CHhHHHHHHHHHHHHHhC
Confidence 998884 2110 112357889999999984
No 417
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.43 E-value=4.9e-05 Score=72.71 Aligned_cols=87 Identities=10% Similarity=0.081 Sum_probs=63.4
Q ss_pred ccccceeEEEccCCcCcCcCCcccCCCCCCCEEEeeCCc-CCCCCCccccCC----CCCCEEEcccCc-CCccCChhccC
Q 003737 136 WASLQLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNL-FTGSIPPDIRKL----INLQKLILSSNS-FTGELPAELTK 209 (799)
Q Consensus 136 ~~~l~L~~L~Ls~N~l~~~~p~~~~~L~~L~~L~Ls~N~-l~~~~p~~~~~l----~~L~~L~Ls~N~-l~~~~p~~~~~ 209 (799)
.....|++||++++.++..--..+..+++|+.|+|++|. ++..--..+..+ ++|++|+|++|. ++..--..+.+
T Consensus 58 ~~~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~ 137 (176)
T 3e4g_A 58 LDKYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHH 137 (176)
T ss_dssp TTCCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGG
T ss_pred CCCceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhc
Confidence 355679999999998876555667889999999999985 553222345554 369999999985 76433345678
Q ss_pred CCCCCEEEccCCc
Q 003737 210 LTNLNDLRISDNN 222 (799)
Q Consensus 210 l~~L~~L~Ls~N~ 222 (799)
+++|++|+++++.
T Consensus 138 ~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 138 FRNLKYLFLSDLP 150 (176)
T ss_dssp CTTCCEEEEESCT
T ss_pred CCCCCEEECCCCC
Confidence 8999999999885
No 418
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=97.32 E-value=0.0004 Score=72.57 Aligned_cols=76 Identities=18% Similarity=0.155 Sum_probs=60.9
Q ss_pred CCCeecccCCeeEEEEEeCCCcEEEEEEccccChhhHHHHHHHHHHHHhCCCC---cccceeEEEEECCEEEEEEecCCC
Q 003737 680 PANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHP---NLVKLYGCCVEGNQLLLVYEYMKN 756 (799)
Q Consensus 680 ~~~~lG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~---niv~l~g~~~~~~~~~lV~Ey~~~ 756 (799)
..+.++.|.++.||+....+|+.++||+...........|.+|++.|+.++|. .+++++++. ..++||||+++
T Consensus 19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g 94 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDE 94 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCC
T ss_pred ceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEeccc
Confidence 35679999999999999888999999997544333346799999999999875 467777763 36899999999
Q ss_pred CcH
Q 003737 757 NCL 759 (799)
Q Consensus 757 GsL 759 (799)
+++
T Consensus 95 ~~~ 97 (288)
T 3d1u_A 95 RPP 97 (288)
T ss_dssp CCC
T ss_pred CCC
Confidence 764
No 419
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=96.81 E-value=0.0011 Score=71.45 Aligned_cols=107 Identities=9% Similarity=0.164 Sum_probs=75.3
Q ss_pred CCeecccCCeeEEEEEeCCCcEEEEEEcc--ccC-hhhHHHHHHHHHHHHhCCC--CcccceeEEEEEC---CEEEEEEe
Q 003737 681 ANKVGEGGFGSVYKGILSDGTVIAVKQLS--SKS-RQGNREFVNEIGMISAQQH--PNLVKLYGCCVEG---NQLLLVYE 752 (799)
Q Consensus 681 ~~~lG~G~~g~Vy~~~~~~g~~vAvK~l~--~~~-~~~~~~f~~E~~~l~~l~H--~niv~l~g~~~~~---~~~~lV~E 752 (799)
.+.++.|.++.||+....+ ..+++|+.. ... ......+.+|.+++..+++ ..++++++++.+. +..++|||
T Consensus 43 ~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme 121 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME 121 (359)
T ss_dssp EEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred EEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence 4578899999999988754 578888876 332 1224578899999998874 5578889888766 34899999
Q ss_pred cCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 753 YMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 753 y~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
|+++..+.+... ..+++++...++.++++.|+.||.
T Consensus 122 ~v~G~~l~~~~~-----------~~l~~~~~~~~~~~l~~~La~LH~ 157 (359)
T 3dxp_A 122 FVSGRVLWDQSL-----------PGMSPAERTAIYDEMNRVIAAMHT 157 (359)
T ss_dssp CCCCBCCCCTTC-----------TTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCCeecCCCcc-----------ccCCHHHHHHHHHHHHHHHHHHhC
Confidence 999877643111 134455667779999999999993
No 420
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.37 E-value=0.0014 Score=63.89 Aligned_cols=15 Identities=20% Similarity=0.282 Sum_probs=6.9
Q ss_pred CCCCCEEEccCCcCC
Q 003737 210 LTNLNDLRISDNNFS 224 (799)
Q Consensus 210 l~~L~~L~Ls~N~l~ 224 (799)
-+.|++|+|+.|.|.
T Consensus 97 N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 97 SPSLRVLNVESNFLT 111 (197)
T ss_dssp CSSCCEEECCSSBCC
T ss_pred CCccCeEecCCCcCC
Confidence 344444444444443
No 421
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.19 E-value=0.0011 Score=64.41 Aligned_cols=20 Identities=10% Similarity=0.074 Sum_probs=12.5
Q ss_pred ccccCCCCCCEEEccCC-cCC
Q 003737 110 TELSKLRYLKQLDLSRN-CLT 129 (799)
Q Consensus 110 ~~~~~l~~L~~L~Ls~N-~l~ 129 (799)
..+.+-+.|++|+|++| .+.
T Consensus 35 ~ll~~n~~L~~L~L~~nn~ig 55 (197)
T 1pgv_A 35 RLREDDTDLKEVNINNMKRVS 55 (197)
T ss_dssp HHHTTCSSCCEEECTTCCSSC
T ss_pred HHHhcCCCccEEECCCCCCCC
Confidence 33455567777777764 554
No 422
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.19 E-value=0.0071 Score=54.77 Aligned_cols=56 Identities=18% Similarity=0.133 Sum_probs=36.2
Q ss_pred EEEccCCcCc-ccCCccccCCCCCCeeccccccCCCCCchhhhccCCCCEEeccCCcCC
Q 003737 286 TLILTKCLIH-GEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLT 343 (799)
Q Consensus 286 ~L~L~~N~l~-~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 343 (799)
.++.+++.++ ..+|..+. ++|+.|+|++|+|+...+..|..+++|+.|+|.+|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 5666666665 24454332 35777777777777666666777777777777766554
No 423
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=95.97 E-value=0.0097 Score=53.87 Aligned_cols=36 Identities=25% Similarity=0.314 Sum_probs=17.3
Q ss_pred CCCEEEeeCCcCCCCCCccccCCCCCCEEEcccCcC
Q 003737 164 TLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSF 199 (799)
Q Consensus 164 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 199 (799)
+|++|+|++|+|+...+..|..+++|++|+|++|.+
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 345555555555433333444455555555555544
No 424
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=95.85 E-value=0.024 Score=59.80 Aligned_cols=102 Identities=8% Similarity=0.074 Sum_probs=73.5
Q ss_pred CCCCCCeecccCCeeEEEEEeCCCcEEEEEEccccChhhHHHHHHHHHHHHhCCC--C--cccceeEEEEECCEEEEEEe
Q 003737 677 NFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQH--P--NLVKLYGCCVEGNQLLLVYE 752 (799)
Q Consensus 677 ~f~~~~~lG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H--~--niv~l~g~~~~~~~~~lV~E 752 (799)
.....+.++.|....||+. |..+++|..... .....+.+|.+++..+.+ . .+.+++++ +..++|||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme 107 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMK 107 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEe
Confidence 3455678999999999987 566888876432 223568999999988866 2 23455554 56789999
Q ss_pred cCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 753 YMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 753 y~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
|+++.++.+.... .++.++...++.|+++.++.||.
T Consensus 108 ~i~G~~l~~~~~~-----------~l~~~~~~~~~~~l~~~La~LH~ 143 (320)
T 3r70_A 108 YIKGERITYEQYH-----------KLSEKEKDALAYDEATFLKELHS 143 (320)
T ss_dssp CCCCBCCCHHHHT-----------TSCHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCCccccccccc-----------cCCHHHHHHHHHHHHHHHHHHhC
Confidence 9999888643321 23455667779999999999983
No 425
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=95.53 E-value=0.068 Score=54.51 Aligned_cols=101 Identities=8% Similarity=0.007 Sum_probs=72.5
Q ss_pred eecccCCe-eEEEEEeC-CCcEEEEEEccccChhhHHHHHHHHHHHHhCC-CCcccceeEEEEECCEEEEEEecCCCCcH
Q 003737 683 KVGEGGFG-SVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQ-HPNLVKLYGCCVEGNQLLLVYEYMKNNCL 759 (799)
Q Consensus 683 ~lG~G~~g-~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~Ey~~~GsL 759 (799)
.+..|..| .||+.... ++..+.+|+-... ....+.+|.+.|..+. +--+.++++++.+++..++||||+++.++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~ 107 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA 107 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence 34445555 68987754 5667889986533 3457888999988774 32366889999999999999999999998
Q ss_pred HHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 760 SRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 760 ~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
.+...... + ....++.+++..|+-||.
T Consensus 108 ~~~~~~~~------------~-~~~~~~~~l~~~L~~Lh~ 134 (272)
T 4gkh_A 108 FQVLEEYP------------D-SGENIVDALAVFLRRLHS 134 (272)
T ss_dssp HHHHHHCG------------G-GHHHHHHHHHHHHHHHHT
T ss_pred cccccCCH------------H-HHHHHHHHHHHHHHHhcC
Confidence 87654321 2 233457788888888884
No 426
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=95.51 E-value=0.047 Score=57.21 Aligned_cols=102 Identities=15% Similarity=0.113 Sum_probs=74.0
Q ss_pred CCeecccCCeeEEEEEeCCCcEEEEEEccccChhhHHHHHHHHHHHHhCCCC---cccceeEEEE-ECCEEEEEEecCCC
Q 003737 681 ANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHP---NLVKLYGCCV-EGNQLLLVYEYMKN 756 (799)
Q Consensus 681 ~~~lG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~---niv~l~g~~~-~~~~~~lV~Ey~~~ 756 (799)
.+.++.|....||+. |..+++|.-. .......+.+|.+++..+.+. -+.+.+.++. ..+..++||||++|
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~--~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPK--SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEES--SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eeecCCCcceeEEEE----CCEEEEEecC--CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 456788888899987 5667888743 223456789999999998753 3556777764 34557899999999
Q ss_pred CcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 757 NCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 757 GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
..+.+.... .++.++...++.|+++.|+.||.
T Consensus 98 ~~l~~~~~~-----------~l~~~~~~~~~~~lg~~La~LH~ 129 (306)
T 3tdw_A 98 QILGEDGMA-----------VLPDDAKDRLALQLAEFMNELSA 129 (306)
T ss_dssp EECHHHHHT-----------TSCHHHHHHHHHHHHHHHHHHHH
T ss_pred eECchhhhh-----------hCCHHHHHHHHHHHHHHHHHHhc
Confidence 888764322 23455666778999999999983
No 427
>2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A*
Probab=95.05 E-value=0.023 Score=54.19 Aligned_cols=86 Identities=28% Similarity=0.435 Sum_probs=69.7
Q ss_pred CHHHHhhhccCCcceeeeeeeecCCceEEEeccccceecCCCccccCCceEEEEEeCCeeeecccccchhcCCCCccEEe
Q 003737 484 DLELYRTARVSPLSLTYYGLCLGNGNYTVRLHFAEIIFKNDSTFNSLGKRIFDIYIQEKLVKKDFNIEDEAGGTGIPIVK 563 (799)
Q Consensus 484 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 563 (799)
+..++++++..+.++++...|..+|.|.++|++.+..+.. .+.++|++++++...+.++|+...+|+ ..++.+
T Consensus 53 ~~~lY~TaR~~~~~~tY~f~v~~~G~Y~VrLhF~ei~~~~------~~~rvFdV~ing~~~l~~fdi~~~ag~-~~~~~~ 125 (174)
T 2jwp_A 53 DQVLYQTERYNEDSFGYDIPIKEEGEYVLVLKFAEVYFAQ------SQQKVFDVRVNGHTVVKDLDIFDRVGH-STAHDE 125 (174)
T ss_dssp HHHTTTCCCCCCSCEEEEEECCSCEEEEEEEEEECCSCCC------SSSSCEEEEETTEEEEEEECHHHHHSS-SSCEEE
T ss_pred CchhhhhhccCCCCeEEEEEeCCCeEEEEEEEEeccccCC------CCCeEeEEEECCEEeecCcCHHHhhCC-CeeEEE
Confidence 4567788888888998888888889999999999987642 578999999999999999999988876 456667
Q ss_pred eeeeeecCcccEE
Q 003737 564 NFPAEVTSHTLKI 576 (799)
Q Consensus 564 ~~~~~~s~n~l~~ 576 (799)
.+.+++..+.++.
T Consensus 126 ~~~~~v~~~~l~i 138 (174)
T 2jwp_A 126 IIPISIKKGKLSV 138 (174)
T ss_dssp EEEEEEETTEEEE
T ss_pred EEEEEEecCceee
Confidence 6777776665544
No 428
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=94.47 E-value=0.046 Score=57.07 Aligned_cols=102 Identities=12% Similarity=0.111 Sum_probs=71.3
Q ss_pred CCeecccCCeeEEEEEeCCCcEEEEEEccccChhhHHHHHHHHHHHHhCC-CCc--ccceeEEEEECC---EEEEEEecC
Q 003737 681 ANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQ-HPN--LVKLYGCCVEGN---QLLLVYEYM 754 (799)
Q Consensus 681 ~~~lG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~-H~n--iv~l~g~~~~~~---~~~lV~Ey~ 754 (799)
.+.++.|....||+.. ..+++|..... .....+.+|.+++..+. +.. +.+++++....+ ..|+||||+
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 4568999999999863 45788886432 34567899999998874 433 334444433333 348899999
Q ss_pred CCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 755 KNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 755 ~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
+|.++.+.... .++.++...++.|+++.++.||.
T Consensus 99 ~G~~l~~~~~~-----------~l~~~~~~~~~~~l~~~la~LH~ 132 (304)
T 3sg8_A 99 KGVPLTPLLLN-----------NLPKQSQNQAAKDLARFLSELHS 132 (304)
T ss_dssp CCEECCHHHHH-----------TSCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeECCccccc-----------cCCHHHHHHHHHHHHHHHHHHHc
Confidence 99888754331 34555677779999999999983
No 429
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=94.28 E-value=0.11 Score=53.81 Aligned_cols=77 Identities=18% Similarity=0.184 Sum_probs=55.4
Q ss_pred CCCCCeecccCCeeEEEEEeCCCcEEEEEEccccChhhHHHHHHHHHHHHhCCCC---cccceeEEEEECCEEEEEEecC
Q 003737 678 FDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHP---NLVKLYGCCVEGNQLLLVYEYM 754 (799)
Q Consensus 678 f~~~~~lG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~---niv~l~g~~~~~~~~~lV~Ey~ 754 (799)
....+.+|.|..+.||+.++.+|+.|.||+-..........|.+|.+.|..+.-. -+.+++++ +. -++||||+
T Consensus 17 v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~--~~--~~lv~e~l 92 (288)
T 3f7w_A 17 VAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW--DD--RTLAMEWV 92 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE--ET--TEEEEECC
T ss_pred eEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec--cC--ceEEEEee
Confidence 3345678999999999999999999999987654433345688999998887422 23444443 33 37899999
Q ss_pred CCCc
Q 003737 755 KNNC 758 (799)
Q Consensus 755 ~~Gs 758 (799)
+.+.
T Consensus 93 ~~~~ 96 (288)
T 3f7w_A 93 DERP 96 (288)
T ss_dssp CCCC
T ss_pred cccC
Confidence 8654
No 430
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=94.26 E-value=0.09 Score=57.15 Aligned_cols=76 Identities=14% Similarity=0.199 Sum_probs=50.2
Q ss_pred CCeecccCCeeEEEEEeC-CCcEEEEEEccccCh-------hhHHHHHHHHHHHHhCCC--Ccc-cceeEEEEECCEEEE
Q 003737 681 ANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSR-------QGNREFVNEIGMISAQQH--PNL-VKLYGCCVEGNQLLL 749 (799)
Q Consensus 681 ~~~lG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~-------~~~~~f~~E~~~l~~l~H--~ni-v~l~g~~~~~~~~~l 749 (799)
.+.+|.|.++.||++... +++.++||....... .....+.+|.+++..+.. +.. .+++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 457899999999999753 467899998653211 123457788888887642 333 355543 4556789
Q ss_pred EEecCCCCc
Q 003737 750 VYEYMKNNC 758 (799)
Q Consensus 750 V~Ey~~~Gs 758 (799)
||||+++..
T Consensus 113 vmE~l~g~~ 121 (397)
T 2olc_A 113 VMEDLSHLK 121 (397)
T ss_dssp EECCCTTSE
T ss_pred EEEeCCCcc
Confidence 999998753
No 431
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=93.69 E-value=0.14 Score=55.03 Aligned_cols=97 Identities=9% Similarity=0.073 Sum_probs=69.0
Q ss_pred CCCeecccCCeeEEEEEeCCCcEEEEEEccccChhhHHHHHHHHHHHHhCCCCc--ccceeEEEEEC-CEEEEEEecCCC
Q 003737 680 PANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPN--LVKLYGCCVEG-NQLLLVYEYMKN 756 (799)
Q Consensus 680 ~~~~lG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~n--iv~l~g~~~~~-~~~~lV~Ey~~~ 756 (799)
..+.++.|....+|+... +|..+++|..... ..+.+|.+++..+.... +.++++++... +..++||||+++
T Consensus 45 ~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G 118 (362)
T 3ovc_A 45 DLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQG 118 (362)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCS
T ss_pred eEEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCC
Confidence 345688999999999876 5788899987532 25889999999886544 45677777654 568999999998
Q ss_pred CcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhc
Q 003737 757 NCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFF 798 (799)
Q Consensus 757 GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH 798 (799)
..+.+. +.++...++.++++.|+-||
T Consensus 119 ~~l~~l----------------~~~~~~~~~~~lg~~La~LH 144 (362)
T 3ovc_A 119 VTLQDL----------------PETELPAVLQPVAEAMDAIA 144 (362)
T ss_dssp EETTTS----------------CGGGSGGGHHHHHHHHHHHH
T ss_pred CCcccC----------------CHHHHHHHHHHHHHHHHHHh
Confidence 766421 11122234677888888777
No 432
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=93.41 E-value=0.14 Score=53.72 Aligned_cols=74 Identities=15% Similarity=0.125 Sum_probs=59.0
Q ss_pred CCeecccCCeeEEEEEeCCCcEEEEEEccccChhhHHHHHHHHHHHHhCC---CCcccceeEEEEECCEEEEEEecCCCC
Q 003737 681 ANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQ---HPNLVKLYGCCVEGNQLLLVYEYMKNN 757 (799)
Q Consensus 681 ~~~lG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~---H~niv~l~g~~~~~~~~~lV~Ey~~~G 757 (799)
.+.++.|....+|+... ++..+++|+.... ....|.+|.+.|..+. ...++++++++...+..++||||+++.
T Consensus 41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~ 116 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKS 116 (312)
T ss_dssp EEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCC
T ss_pred eEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCC
Confidence 45689999999999886 4667888887542 3567889998888774 356788999888888899999999987
Q ss_pred c
Q 003737 758 C 758 (799)
Q Consensus 758 s 758 (799)
.
T Consensus 117 ~ 117 (312)
T 3jr1_A 117 K 117 (312)
T ss_dssp C
T ss_pred C
Confidence 5
No 433
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=92.40 E-value=0.075 Score=56.75 Aligned_cols=115 Identities=7% Similarity=0.006 Sum_probs=72.6
Q ss_pred Cee-cccCCeeEEEEEeC-------CCcEEEEEEccccC---hhhHHHHHHHHHHHHhCCC---CcccceeEEEEEC---
Q 003737 682 NKV-GEGGFGSVYKGILS-------DGTVIAVKQLSSKS---RQGNREFVNEIGMISAQQH---PNLVKLYGCCVEG--- 744 (799)
Q Consensus 682 ~~l-G~G~~g~Vy~~~~~-------~g~~vAvK~l~~~~---~~~~~~f~~E~~~l~~l~H---~niv~l~g~~~~~--- 744 (799)
+.| +.|....+|+.... ++..+++|...... ......+.+|++++..+.. -.+.++++++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 456 78889999988754 26678888865432 1112457788888887743 2466788877654
Q ss_pred CEEEEEEecCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 745 NQLLLVYEYMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 745 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
+..++||||+++..+.+.+...- ...+...++.++...++.++++.|+-||.
T Consensus 106 g~~~~v~e~l~G~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~La~LH~ 157 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPPDVMPYTF---GDNWFADAPAERQRQLQDATVAALATLHS 157 (357)
T ss_dssp SSCEEEEECCCCBCCCBTTBGGG---SCSTTTTSCHHHHHHHHHHHHHHHHHHTT
T ss_pred CCceEEEEecCCCChhhcCcccc---cccccCCCCHHHHHHHHHHHHHHHHHHhC
Confidence 34689999999877654321000 00000023344445568899999999984
No 434
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=80.05 E-value=0.27 Score=54.62 Aligned_cols=60 Identities=12% Similarity=0.141 Sum_probs=17.8
Q ss_pred CCeecccCCeeEEEEEeCC-CcEEEE------EEccccC--hhhHHHHHHHHHHHHhCCCCcccceeEEEEE
Q 003737 681 ANKVGEGGFGSVYKGILSD-GTVIAV------KQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVE 743 (799)
Q Consensus 681 ~~~lG~G~~g~Vy~~~~~~-g~~vAv------K~l~~~~--~~~~~~f~~E~~~l~~l~H~niv~l~g~~~~ 743 (799)
.+.+| ||.||+|.+.. ...||| |+.+... ......|.+|..++.+.+|+|+++.+++...
T Consensus 147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp TTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred cccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence 45566 99999999753 367888 7765432 2234579999999999999999999988654
No 435
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=78.15 E-value=6.2 Score=40.94 Aligned_cols=73 Identities=14% Similarity=0.245 Sum_probs=41.5
Q ss_pred CeecccCCeeEEEEEeCCCcEEEEEEccccChhhHHHHHHHHHHHHhCCC--CcccceeE------EEEECCEEEEEEec
Q 003737 682 NKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQH--PNLVKLYG------CCVEGNQLLLVYEY 753 (799)
Q Consensus 682 ~~lG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H--~niv~l~g------~~~~~~~~~lV~Ey 753 (799)
+.++.|..+.||+....+| .+++|+.... ......|.+++..+.. -.+.+++. +....+..++||||
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~ 112 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW 112 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence 3455677889999987655 4889998652 1233344444444321 12333332 22356778999999
Q ss_pred CCCCcH
Q 003737 754 MKNNCL 759 (799)
Q Consensus 754 ~~~GsL 759 (799)
+++..+
T Consensus 113 i~G~~~ 118 (346)
T 2q83_A 113 IEGRPF 118 (346)
T ss_dssp CCCBCC
T ss_pred ecCccC
Confidence 998654
No 436
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=77.93 E-value=4.3 Score=44.01 Aligned_cols=80 Identities=14% Similarity=0.191 Sum_probs=48.4
Q ss_pred CCeecccCCeeEEEEEeCCCcEEEEEEcccc----Ch-----hhHHHHHHHHHHHH-hCCCCcccceeEEEEECCEEEEE
Q 003737 681 ANKVGEGGFGSVYKGILSDGTVIAVKQLSSK----SR-----QGNREFVNEIGMIS-AQQHPNLVKLYGCCVEGNQLLLV 750 (799)
Q Consensus 681 ~~~lG~G~~g~Vy~~~~~~g~~vAvK~l~~~----~~-----~~~~~f~~E~~~l~-~l~H~niv~l~g~~~~~~~~~lV 750 (799)
.+.+|.|....||+... +++.++||..... .. .....+..|+..+. ...+..+.+++.+. .+..++|
T Consensus 39 i~~l~~G~~n~vyrv~~-~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~lv 115 (420)
T 2pyw_A 39 IKEVGDGNLNFVFIVVG-SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMALIG 115 (420)
T ss_dssp EEECCCSSSCEEEEEEC-SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTEEE
T ss_pred EEEccCCCcEEEEEEEc-CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccEEE
Confidence 45688999999999964 4678999954221 00 12334444443332 22234566666654 5667999
Q ss_pred EecC-CCC-cHHHHH
Q 003737 751 YEYM-KNN-CLSRAI 763 (799)
Q Consensus 751 ~Ey~-~~G-sL~~~L 763 (799)
|||+ +++ .+.+.+
T Consensus 116 ~e~l~~g~~~l~~~l 130 (420)
T 2pyw_A 116 MRYLEPPHIILRKGL 130 (420)
T ss_dssp ECCCCTTCEEHHHHH
T ss_pred EeecCCcchhHHHHH
Confidence 9999 763 444443
No 437
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=73.77 E-value=4 Score=44.52 Aligned_cols=95 Identities=16% Similarity=0.153 Sum_probs=60.1
Q ss_pred CeecccCCeeEEEEEeCC--------CcEEEEEEccccChhhHHHHHHHHHHHHhCCCCcc-cceeEEEEECCEEEEEEe
Q 003737 682 NKVGEGGFGSVYKGILSD--------GTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNL-VKLYGCCVEGNQLLLVYE 752 (799)
Q Consensus 682 ~~lG~G~~g~Vy~~~~~~--------g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~lV~E 752 (799)
+.|+.|....+|+...++ +..+.+|+.... .....+.+|.+++..+...++ .++++.+. + .+|+|
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~--~--g~v~e 152 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFS--G--GRLEE 152 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEET--T--EEEEC
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeC--C--CEEEE
Confidence 457788889999998753 478889987432 112456689888888754344 56666543 2 28999
Q ss_pred cCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 753 YMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 753 y~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
|+++-++... . +. . ...+.++++.|+-||.
T Consensus 153 ~l~G~~l~~~----~----------l~--~-~~~~~~ia~~La~LH~ 182 (429)
T 1nw1_A 153 YIPSRPLSCH----E----------IS--L-AHMSTKIAKRVAKVHQ 182 (429)
T ss_dssp CCCEEECCTT----G----------GG--S-HHHHHHHHHHHHHHTT
T ss_pred EeCCcccChh----h----------cC--C-HHHHHHHHHHHHHHhC
Confidence 9986444210 0 00 0 1136677888888873
No 438
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=73.67 E-value=2.5 Score=29.77 Aligned_cols=27 Identities=22% Similarity=0.237 Sum_probs=12.7
Q ss_pred EeehhhHHHHHHHHH-HHHHHhhhhccC
Q 003737 620 MIMAAIVGASVLLVL-LILFIMRWKGCL 646 (799)
Q Consensus 620 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 646 (799)
.++.+++++++++++ ++++++++||++
T Consensus 12 ~IA~gVVgGv~~~~ii~~~~~~~~RRr~ 39 (44)
T 2ks1_B 12 SIATGMVGALLLLLVVALGIGLFMRRRH 39 (44)
T ss_dssp SSTHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred eEEeehhHHHHHHHHHHHHHHHHhhhhH
Confidence 355666665543333 333344455443
No 439
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=68.71 E-value=12 Score=38.61 Aligned_cols=76 Identities=9% Similarity=0.002 Sum_probs=49.8
Q ss_pred CeecccCCeeEEEEEeCCCcEEEEEEccccChhhHHHHHHHHHHHHhCCCC--cccceeEE-----EEECCEEEEEEecC
Q 003737 682 NKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHP--NLVKLYGC-----CVEGNQLLLVYEYM 754 (799)
Q Consensus 682 ~~lG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~--niv~l~g~-----~~~~~~~~lV~Ey~ 754 (799)
..++ |....||+....+|+.+++|...... .....+..|.+++..+... .+++++.. ....+..++||||+
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i 109 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSV 109 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECC
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEec
Confidence 3466 77889999887778789999986432 1344666787777766422 23444442 22355678999999
Q ss_pred CCCcH
Q 003737 755 KNNCL 759 (799)
Q Consensus 755 ~~GsL 759 (799)
++..+
T Consensus 110 ~G~~~ 114 (328)
T 1zyl_A 110 GGRQF 114 (328)
T ss_dssp CCEEC
T ss_pred CCCCC
Confidence 87543
No 440
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=68.53 E-value=19 Score=37.20 Aligned_cols=100 Identities=9% Similarity=0.028 Sum_probs=53.5
Q ss_pred CeecccCCee-EEEEEeCCCcEEEEEEccccChhhHHHHHHHHHHHHhCCC--CcccceeEEEEECCEEEEEEecCCCCc
Q 003737 682 NKVGEGGFGS-VYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQH--PNLVKLYGCCVEGNQLLLVYEYMKNNC 758 (799)
Q Consensus 682 ~~lG~G~~g~-Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H--~niv~l~g~~~~~~~~~lV~Ey~~~Gs 758 (799)
+.++.|.... +|+....+|..+++|....... ..+..|++++..+.. -.+.+++.+..+.+ ++|||++.+..
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~ 98 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDAL 98 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCB
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcc
Confidence 3455554443 6676654467777776544321 233455666665532 23556666643333 78999998888
Q ss_pred HHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 759 LSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 759 L~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
+.+++..... . . ...+.++++.|+-||.
T Consensus 99 l~~~l~~~~~----------~--~-~~~~~~~~~~La~lH~ 126 (333)
T 3csv_A 99 FTEVINNDPA----------Q--E-MPLYRAAVDLLIHLHD 126 (333)
T ss_dssp HHHHHHHCGG----------G--H-HHHHHHHHHHHHHHHT
T ss_pred hHHHhcCCCc----------c--H-HHHHHHHHHHHHHHhc
Confidence 8887754321 1 1 2235677777777773
No 441
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=68.25 E-value=3.8 Score=28.78 Aligned_cols=26 Identities=23% Similarity=0.345 Sum_probs=11.5
Q ss_pred eehhhHHHHHHHH-HHHHHHhhhhccC
Q 003737 621 IMAAIVGASVLLV-LLILFIMRWKGCL 646 (799)
Q Consensus 621 ~~~~~~~~~~~~~-~~~~~~~~~~~~~ 646 (799)
++.++++++++++ +++.+++++||++
T Consensus 12 IA~gVVgGv~~v~ii~~~~~~~~RRRr 38 (44)
T 2l2t_A 12 IAAGVIGGLFILVIVGLTFAVYVRRKS 38 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEeehHHHHHHHHHHHHHHHHhhhhh
Confidence 4555555544333 3333344444443
No 442
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=67.96 E-value=5.3 Score=42.74 Aligned_cols=73 Identities=19% Similarity=0.238 Sum_probs=44.1
Q ss_pred CeecccCCeeEEEEEeC--------CCcEEEEEEccccChhhHHHHHHHHHHHHhCCCCcc-cceeEEEEECCEEEEEEe
Q 003737 682 NKVGEGGFGSVYKGILS--------DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNL-VKLYGCCVEGNQLLLVYE 752 (799)
Q Consensus 682 ~~lG~G~~g~Vy~~~~~--------~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~lV~E 752 (799)
+.+..|....+|+...+ +++.+.+|+.... ......+.+|.+++..+.-..+ .++++++. +. +|||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~--~g--~v~e 130 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFP--EG--RLEQ 130 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEET--TE--EEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcC--Cc--cEEE
Confidence 45666778889998864 2468889886332 2234566789998887743333 56666553 32 9999
Q ss_pred cCCCCcH
Q 003737 753 YMKNNCL 759 (799)
Q Consensus 753 y~~~GsL 759 (799)
|+++..|
T Consensus 131 ~i~G~~l 137 (379)
T 3feg_A 131 YIPSRPL 137 (379)
T ss_dssp CCSEEEC
T ss_pred EecCccC
Confidence 9998554
No 443
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=67.18 E-value=9.4 Score=39.32 Aligned_cols=90 Identities=8% Similarity=0.056 Sum_probs=50.2
Q ss_pred cHHHHHHhhcCCCC-----CCeecccCCeeEEEEEeCCCcEEEEEEccccChhhHHHHHHHHHHHHhCCCCc--ccceeE
Q 003737 667 TLRQIKAATNNFDP-----ANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPN--LVKLYG 739 (799)
Q Consensus 667 ~~~~~~~~t~~f~~-----~~~lG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~n--iv~l~g 739 (799)
+.+++......|.. .+.++.|....+|+....+| .+++|...... ..+.+..|++++..+.... +.+++.
T Consensus 8 ~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~~~ 84 (322)
T 2ppq_A 8 TEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPLP 84 (322)
T ss_dssp CHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCC
T ss_pred CHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCcccC
Confidence 34444444444543 23466788889999987666 57788886521 1234556777776653222 233332
Q ss_pred E------EEECCEEEEEEecCCCCcH
Q 003737 740 C------CVEGNQLLLVYEYMKNNCL 759 (799)
Q Consensus 740 ~------~~~~~~~~lV~Ey~~~GsL 759 (799)
. ....+..++++||+++..+
T Consensus 85 ~~~g~~~~~~~g~~~~l~~~l~G~~~ 110 (322)
T 2ppq_A 85 RKDGELLGELSGRPAALISFLEGMWL 110 (322)
T ss_dssp BTTCCSCEEETTEEEEEEECCCCBCC
T ss_pred CCCCCEEEEECCEEEEEEEeCCCcCC
Confidence 1 2234667899999998543
No 444
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=64.22 E-value=14 Score=40.46 Aligned_cols=97 Identities=15% Similarity=0.086 Sum_probs=59.4
Q ss_pred CCeecccCCeeEEEEEeCC-CcEEEEEEccccChhhHHHHHHHHHHHHhCCCCcc-cceeEEEEECCEEEEEEecCCCCc
Q 003737 681 ANKVGEGGFGSVYKGILSD-GTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNL-VKLYGCCVEGNQLLLVYEYMKNNC 758 (799)
Q Consensus 681 ~~~lG~G~~g~Vy~~~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~lV~Ey~~~Gs 758 (799)
.+.|+.|-...+|+....+ +..+++|+........ -+-.+|.+++..+...++ .++++++ .+ .+||||+++-+
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~-idR~~E~~vl~~L~~~gl~P~ll~~~--~~--G~v~e~I~G~~ 187 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEI-INREREKKISCILYNKNIAKKIYVFF--TN--GRIEEFMDGYA 187 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSC-SCHHHHHHHHHHHTTSSSBCCEEEEE--TT--EEEEECCCSEE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhh-cCHHHHHHHHHHHHhcCCCCCEEEEe--CC--eEEEEeeCCcc
Confidence 3567788889999998765 4778888874432111 112578888888865555 4677665 23 25999998755
Q ss_pred HHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 759 LSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 759 L~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
|.. . .+.. ..++.+|++.|+-||.
T Consensus 188 l~~----~----------~l~~---~~~~~~ia~~La~LH~ 211 (458)
T 2qg7_A 188 LSR----E----------DIKN---PKFQKLIAKNLKLLHD 211 (458)
T ss_dssp CCT----T----------TTTS---HHHHHHHHHHHHHHHT
T ss_pred CCh----h----------hcCC---HHHHHHHHHHHHHHhc
Confidence 421 0 1111 1236778888888884
No 445
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=63.50 E-value=7.7 Score=39.70 Aligned_cols=71 Identities=8% Similarity=0.081 Sum_probs=43.2
Q ss_pred CCeecccCCeeEEEEEeCCCcEEEEEEccccChhhHHHHHHHHHHHHhCCCCcc-cceeEEEEECCEEEEEEecC-CCCc
Q 003737 681 ANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNL-VKLYGCCVEGNQLLLVYEYM-KNNC 758 (799)
Q Consensus 681 ~~~lG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~lV~Ey~-~~Gs 758 (799)
.+.++.|....+|+. ..+++|+....... .....+|.+++..+....+ .+++++ +.+.-++|+||+ ++-+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~~ 94 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQT 94 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCEE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCcc
Confidence 677889999999998 45788877543211 1123467777776643333 355543 344457899999 4434
Q ss_pred H
Q 003737 759 L 759 (799)
Q Consensus 759 L 759 (799)
+
T Consensus 95 l 95 (301)
T 3dxq_A 95 M 95 (301)
T ss_dssp C
T ss_pred C
Confidence 4
No 446
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=61.57 E-value=5.3 Score=28.02 Aligned_cols=7 Identities=14% Similarity=-0.282 Sum_probs=2.9
Q ss_pred Hhhhhcc
Q 003737 639 IMRWKGC 645 (799)
Q Consensus 639 ~~~~~~~ 645 (799)
++++||+
T Consensus 32 ~~~~RRR 38 (44)
T 2jwa_A 32 GILIKRR 38 (44)
T ss_dssp HHHHHHH
T ss_pred Hhheehh
Confidence 3444443
No 447
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=57.34 E-value=5.1 Score=27.62 Aligned_cols=24 Identities=17% Similarity=0.213 Sum_probs=9.7
Q ss_pred eehhhHHHHHHHH-HHHHHHhhhhc
Q 003737 621 IMAAIVGASVLLV-LLILFIMRWKG 644 (799)
Q Consensus 621 ~~~~~~~~~~~~~-~~~~~~~~~~~ 644 (799)
+++++++++++++ +++++++++||
T Consensus 15 I~~~vv~Gv~ll~~iv~~~~~~~rR 39 (41)
T 2k9y_A 15 VIGGVAVGVVLLLVLAGVGFFIHRR 39 (41)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSSSSS
T ss_pred EEeehhHHHHHHHHHHHHheeEeee
Confidence 3444444444433 23333344443
No 448
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=50.81 E-value=11 Score=39.91 Aligned_cols=73 Identities=10% Similarity=0.079 Sum_probs=42.9
Q ss_pred CeecccCCeeEEEEEeCC---------CcEEEEEEccccChhhHHHHHHHHHHHHhCCCCc-ccceeEEEEECCEEEEEE
Q 003737 682 NKVGEGGFGSVYKGILSD---------GTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPN-LVKLYGCCVEGNQLLLVY 751 (799)
Q Consensus 682 ~~lG~G~~g~Vy~~~~~~---------g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~n-iv~l~g~~~~~~~~~lV~ 751 (799)
..++.|....+|+....+ +..+++|........ ..+..+|.+++..+.... ..++++.. . -++||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~-~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v~ 113 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE-LYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRIE 113 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG-TSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc-eecHHHHHHHHHHHHhcCCCCceEEec--C--CcEEE
Confidence 456778888999988654 267888887543221 112357777777764333 34666543 2 26899
Q ss_pred ecCCCCcH
Q 003737 752 EYMKNNCL 759 (799)
Q Consensus 752 Ey~~~GsL 759 (799)
||+++..+
T Consensus 114 e~i~G~~l 121 (369)
T 3c5i_A 114 EWLYGDPL 121 (369)
T ss_dssp ECCCSEEC
T ss_pred EEecCCcC
Confidence 99987543
No 449
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=46.38 E-value=44 Score=34.70 Aligned_cols=67 Identities=6% Similarity=-0.027 Sum_probs=41.8
Q ss_pred ccCCeeEEEEEeCCCcEEEEEEccccChhhHHHHHHHHHHHHhCC---CCcccceeEE------EEECCEEEEEEecCCC
Q 003737 686 EGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQ---HPNLVKLYGC------CVEGNQLLLVYEYMKN 756 (799)
Q Consensus 686 ~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~---H~niv~l~g~------~~~~~~~~lV~Ey~~~ 756 (799)
.|....||+....+| .+++|+...... .+|.+++..+. -+.+++++.. ....+..++||||+++
T Consensus 33 ~g~~N~vy~v~~~~g-~~vLK~~~~~~~------~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~G 105 (339)
T 3i1a_A 33 ADTNAFAYQADSESK-SYFIKLKYGYHD------EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIHA 105 (339)
T ss_dssp SCSSCEEEEEECSSC-EEEEEEEECSSC------CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCCC
T ss_pred CccccceEEEEeCCC-CEEEEEecCccc------hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccCC
Confidence 333678999987777 889998765432 24444444442 1224444432 2345678999999998
Q ss_pred CcH
Q 003737 757 NCL 759 (799)
Q Consensus 757 GsL 759 (799)
..+
T Consensus 106 ~~~ 108 (339)
T 3i1a_A 106 PNG 108 (339)
T ss_dssp CBT
T ss_pred CcC
Confidence 765
No 450
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=41.20 E-value=39 Score=36.26 Aligned_cols=74 Identities=15% Similarity=0.167 Sum_probs=44.2
Q ss_pred CeecccCCeeEEEEEeCC--------CcEEEEEEccccChh-----------hH-------HHHHHHHHHHHhCCCCc-c
Q 003737 682 NKVGEGGFGSVYKGILSD--------GTVIAVKQLSSKSRQ-----------GN-------REFVNEIGMISAQQHPN-L 734 (799)
Q Consensus 682 ~~lG~G~~g~Vy~~~~~~--------g~~vAvK~l~~~~~~-----------~~-------~~f~~E~~~l~~l~H~n-i 734 (799)
+.+..|-...+|++..++ +..|.++..-..... ++ +....|.+++..+.... .
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 345567778889888653 357778776432211 11 12345888888775333 4
Q ss_pred cceeEEEEECCEEEEEEecCCCCcH
Q 003737 735 VKLYGCCVEGNQLLLVYEYMKNNCL 759 (799)
Q Consensus 735 v~l~g~~~~~~~~~lV~Ey~~~GsL 759 (799)
.++++++. +- +|+||+++-+|
T Consensus 138 Pkl~~~~~--~G--~i~efI~G~~L 158 (401)
T 3f2s_A 138 PKLYGIFP--QG--RLEQFIPSRRL 158 (401)
T ss_dssp CCEEEEET--TE--EEEECCCEEEC
T ss_pred CeEEEEeC--CC--eEEEecCCccC
Confidence 56776653 22 89999996444
No 451
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=37.21 E-value=11 Score=24.94 Aligned_cols=6 Identities=17% Similarity=-0.081 Sum_probs=2.5
Q ss_pred hhhhcc
Q 003737 640 MRWKGC 645 (799)
Q Consensus 640 ~~~~~~ 645 (799)
+++||+
T Consensus 29 ~~iRRr 34 (35)
T 1iij_A 29 ILIKRR 34 (35)
T ss_dssp HHHHHC
T ss_pred eEEeec
Confidence 444443
No 452
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=36.23 E-value=52 Score=35.51 Aligned_cols=96 Identities=8% Similarity=0.092 Sum_probs=56.9
Q ss_pred CeecccCCeeEEEEEeCC--------CcEEEEEEccccChhhHHHHHHHHHHHHhCCCCcc-cceeEEEEECCEEEEEEe
Q 003737 682 NKVGEGGFGSVYKGILSD--------GTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNL-VKLYGCCVEGNQLLLVYE 752 (799)
Q Consensus 682 ~~lG~G~~g~Vy~~~~~~--------g~~vAvK~l~~~~~~~~~~f~~E~~~l~~l~H~ni-v~l~g~~~~~~~~~lV~E 752 (799)
+.+..|....+|+....+ +..+++|+....... .-+..+|.+++..+.-..+ .++++.+ .+ ++|||
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~-~idR~~E~~~l~~L~~~gi~P~l~~~~--~~--~~I~e 150 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGK-FYDSKVELDVFRYLSNINIAPNIIADF--PE--GRIEE 150 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-C-CCCHHHHHHHHHHHHHTTSSCCEEEEE--TT--EEEEE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcch-hcCHHHHHHHHHHHHhcCCCCCEEEEc--CC--CEEEE
Confidence 456667788899988753 578888886543211 1123567777777643333 4556533 32 68999
Q ss_pred cCCCCcHHHHHhcCcccccccccCCCChHHHHHHHHHHHHHHhhhcC
Q 003737 753 YMKNNCLSRAIFGKLRIFHISIYATFPQGNIQILIISAANNIDFFFF 799 (799)
Q Consensus 753 y~~~GsL~~~L~~~~~~~~~~~~~~~~~~~i~~~~~qi~~gL~yLH~ 799 (799)
|+++..|..- .+.. ..++.++++.|+-||.
T Consensus 151 fI~G~~l~~~--------------~l~~---~~~~~~ia~~La~LH~ 180 (424)
T 3mes_A 151 FIDGEPLTTK--------------QLQL---THICVEVAKNMGSLHI 180 (424)
T ss_dssp CCCSEECCTG--------------GGGS---HHHHHHHHHHHHHHHT
T ss_pred EeCCccCChh--------------hcCC---HHHHHHHHHHHHHHhc
Confidence 9998544210 0001 1136678888888874
No 453
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=33.83 E-value=38 Score=23.75 Aligned_cols=26 Identities=4% Similarity=0.069 Sum_probs=13.2
Q ss_pred eehhhHHHHHHHHHHHHHHhhhhccC
Q 003737 621 IMAAIVGASVLLVLLILFIMRWKGCL 646 (799)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (799)
++.++++.++++.+..+++-+++.++
T Consensus 16 VVgGv~~v~ii~~~~~~~~RRRr~~~ 41 (44)
T 2l2t_A 16 VIGGLFILVIVGLTFAVYVRRKSIKK 41 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCSSC
T ss_pred ehHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 34445554555555555555554444
No 454
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=32.83 E-value=38 Score=23.73 Aligned_cols=28 Identities=18% Similarity=0.108 Sum_probs=17.4
Q ss_pred eEeehhhHHHHHHHHHHHHHHhhhhccC
Q 003737 619 VMIMAAIVGASVLLVLLILFIMRWKGCL 646 (799)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (799)
..++.++++.++++++..+++-+++.++
T Consensus 15 ~gVVgGv~~~~ii~~~~~~~~RRr~~~~ 42 (44)
T 2ks1_B 15 TGMVGALLLLLVVALGIGLFMRRRHIVR 42 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCCS
T ss_pred eehhHHHHHHHHHHHHHHHHhhhhHhhc
Confidence 3455556666666677777776665554
No 455
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=30.12 E-value=32 Score=23.30 Aligned_cols=9 Identities=11% Similarity=0.231 Sum_probs=4.2
Q ss_pred ehhhHHHHH
Q 003737 622 MAAIVGASV 630 (799)
Q Consensus 622 ~~~~~~~~~ 630 (799)
+.+++++++
T Consensus 13 IAGiVvG~v 21 (38)
T 2k1k_A 13 IVAVIFGLL 21 (38)
T ss_dssp HHHHHHHHH
T ss_pred eeeeehHHH
Confidence 444554443
No 456
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=24.59 E-value=1.9e+02 Score=23.94 Aligned_cols=45 Identities=18% Similarity=0.222 Sum_probs=24.7
Q ss_pred CcCcCCcccCCCCCCCEEEeeCCcCCCCCCccccCCCCCCEEEccc
Q 003737 151 LSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSS 196 (799)
Q Consensus 151 l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 196 (799)
++.+-...|.++++|+.+.+-.+ ++..-...|.++.+|+.+.+..
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred cCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 34444455666666666666544 3323344566666666666543
Done!