Query 003740
Match_columns 799
No_of_seqs 465 out of 3154
Neff 8.4
Searched_HMMs 46136
Date Thu Mar 28 11:12:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003740.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003740hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0204 Calcium transporting A 100.0 8E-178 2E-182 1457.8 61.9 772 4-798 2-791 (1034)
2 KOG0202 Ca2+ transporting ATPa 100.0 2E-126 5E-131 1052.0 54.4 660 119-798 7-730 (972)
3 TIGR01517 ATPase-IIB_Ca plasma 100.0 9E-120 2E-124 1100.1 77.0 696 92-798 14-721 (941)
4 TIGR01523 ATPase-IID_K-Na pota 100.0 1E-114 2E-119 1054.4 71.7 648 119-798 10-798 (1053)
5 COG0474 MgtA Cation transport 100.0 2E-114 4E-119 1043.1 61.8 637 123-798 32-691 (917)
6 PRK10517 magnesium-transportin 100.0 6E-112 1E-116 1018.0 67.6 615 120-799 53-690 (902)
7 TIGR01106 ATPase-IIC_X-K sodiu 100.0 4E-111 8E-116 1026.8 72.3 658 118-798 19-736 (997)
8 PRK15122 magnesium-transportin 100.0 6E-111 1E-115 1011.5 68.9 622 119-798 30-689 (903)
9 TIGR01524 ATPase-IIIB_Mg magne 100.0 1E-110 2E-115 1008.8 70.5 615 119-799 18-655 (867)
10 TIGR01522 ATPase-IIA2_Ca golgi 100.0 2E-109 5E-114 1003.4 73.7 633 119-798 7-670 (884)
11 TIGR01647 ATPase-IIIA_H plasma 100.0 9E-107 2E-111 962.7 65.0 577 135-798 1-586 (755)
12 TIGR01116 ATPase-IIA1_Ca sarco 100.0 2E-103 4E-108 953.6 69.3 620 167-798 1-682 (917)
13 TIGR01657 P-ATPase-V P-type AT 100.0 5E-101 1E-105 943.8 58.0 608 133-799 137-852 (1054)
14 KOG0203 Na+/K+ ATPase, alpha s 100.0 2E-101 5E-106 850.8 31.7 655 117-797 40-757 (1019)
15 PRK01122 potassium-transportin 100.0 4.4E-94 9.5E-99 827.2 55.9 516 169-798 29-559 (679)
16 PRK14010 potassium-transportin 100.0 1.2E-92 2.7E-97 814.4 55.0 512 169-798 28-555 (673)
17 TIGR01497 kdpB K+-transporting 100.0 2.7E-89 5.9E-94 785.5 56.2 517 169-798 28-560 (675)
18 TIGR01652 ATPase-Plipid phosph 100.0 5.2E-90 1.1E-94 849.2 52.6 624 150-798 1-819 (1057)
19 COG2217 ZntA Cation transport 100.0 2E-91 4.4E-96 804.2 33.9 616 42-798 13-651 (713)
20 PLN03190 aminophospholipid tra 100.0 2E-84 4.3E-89 791.0 59.9 627 149-799 86-923 (1178)
21 KOG0208 Cation transport ATPas 100.0 2.3E-81 5E-86 702.1 41.8 594 132-776 157-878 (1140)
22 KOG0207 Cation transport ATPas 100.0 1.1E-82 2.5E-87 714.0 29.3 635 44-798 159-837 (951)
23 PRK11033 zntA zinc/cadmium/mer 100.0 7.3E-80 1.6E-84 730.1 49.2 604 43-798 65-680 (741)
24 KOG0205 Plasma membrane H+-tra 100.0 7.9E-80 1.7E-84 660.5 35.1 606 117-797 19-635 (942)
25 TIGR01511 ATPase-IB1_Cu copper 100.0 7.5E-75 1.6E-79 669.9 46.3 499 160-798 2-518 (562)
26 PRK10671 copA copper exporting 100.0 1.2E-73 2.7E-78 690.4 51.6 618 43-798 111-764 (834)
27 TIGR01494 ATPase_P-type ATPase 100.0 7.9E-74 1.7E-78 657.5 47.4 442 209-798 5-453 (499)
28 TIGR01525 ATPase-IB_hvy heavy 100.0 1.3E-73 2.9E-78 661.6 46.9 487 180-798 6-499 (556)
29 TIGR01512 ATPase-IB2_Cd heavy 100.0 5.5E-72 1.2E-76 644.0 48.0 466 179-798 5-478 (536)
30 KOG0209 P-type ATPase [Inorgan 100.0 5.6E-71 1.2E-75 605.2 29.8 587 134-782 161-837 (1160)
31 KOG0206 P-type ATPase [General 100.0 1E-66 2.2E-71 613.8 33.4 627 146-797 28-844 (1151)
32 KOG0210 P-type ATPase [Inorgan 100.0 2.3E-66 5.1E-71 559.2 30.0 605 146-798 75-832 (1051)
33 COG2216 KdpB High-affinity K+ 100.0 1.1E-63 2.3E-68 525.8 34.7 473 210-793 76-552 (681)
34 PF00122 E1-E2_ATPase: E1-E2 A 100.0 4.7E-35 1E-39 303.2 23.9 222 207-446 3-230 (230)
35 PF00702 Hydrolase: haloacid d 99.9 1.8E-25 3.8E-30 228.7 13.6 97 648-770 115-215 (215)
36 COG4087 Soluble P-type ATPase 99.6 1.6E-14 3.5E-19 127.6 10.3 122 650-798 20-146 (152)
37 PF12515 CaATP_NAI: Ca2+-ATPas 99.5 1.9E-15 4.1E-20 108.9 2.5 46 4-50 1-46 (47)
38 PF13246 Hydrolase_like2: Puta 99.5 3.6E-14 7.9E-19 123.4 9.0 87 507-594 2-91 (91)
39 KOG4383 Uncharacterized conser 99.3 2.3E-10 4.9E-15 125.6 25.3 192 582-776 698-1019(1354)
40 TIGR02137 HSK-PSP phosphoserin 99.1 3.6E-10 7.8E-15 114.0 10.8 121 660-798 68-195 (203)
41 PF00690 Cation_ATPase_N: Cati 99.1 3.4E-10 7.4E-15 93.2 6.8 68 117-186 2-69 (69)
42 smart00831 Cation_ATPase_N Cat 98.9 4.2E-09 9E-14 85.4 7.2 62 127-190 2-63 (64)
43 PRK11133 serB phosphoserine ph 98.9 9E-09 2E-13 110.9 11.4 114 660-789 181-301 (322)
44 COG0560 SerB Phosphoserine pho 98.8 2E-08 4.2E-13 101.9 11.3 111 659-789 76-197 (212)
45 PRK10513 sugar phosphate phosp 98.8 4.9E-08 1.1E-12 103.6 13.3 53 736-789 195-250 (270)
46 TIGR00338 serB phosphoserine p 98.8 4.3E-08 9.3E-13 100.6 11.9 123 660-797 85-218 (219)
47 TIGR01670 YrbI-phosphatas 3-de 98.8 3.5E-08 7.7E-13 95.2 10.2 113 650-798 24-148 (154)
48 COG0561 Cof Predicted hydrolas 98.8 1E-07 2.2E-12 100.9 14.5 137 661-798 21-257 (264)
49 PRK15126 thiamin pyrimidine py 98.7 1.1E-07 2.4E-12 101.0 13.2 129 659-788 18-241 (272)
50 TIGR01487 SPP-like sucrose-pho 98.7 1.1E-07 2.3E-12 97.4 12.3 129 660-789 18-201 (215)
51 PF08282 Hydrolase_3: haloacid 98.7 1.5E-07 3.3E-12 98.1 12.0 139 658-798 13-254 (254)
52 TIGR02726 phenyl_P_delta pheny 98.7 4.7E-08 1E-12 95.2 7.1 93 667-789 41-136 (169)
53 PRK01158 phosphoglycolate phos 98.6 2.4E-07 5.1E-12 95.8 12.6 128 661-789 21-211 (230)
54 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.6 1.9E-07 4.1E-12 94.3 10.8 119 660-789 80-201 (201)
55 PRK10976 putative hydrolase; P 98.6 3.3E-07 7.1E-12 97.1 12.8 52 736-788 189-243 (266)
56 PRK13582 thrH phosphoserine ph 98.6 2.5E-07 5.4E-12 93.8 10.6 119 660-797 68-194 (205)
57 PRK09484 3-deoxy-D-manno-octul 98.6 2.3E-07 4.9E-12 92.3 9.1 93 667-789 55-150 (183)
58 TIGR01482 SPP-subfamily Sucros 98.5 5.4E-07 1.2E-11 92.8 12.0 129 660-789 15-203 (225)
59 PLN02887 hydrolase family prot 98.5 7.7E-07 1.7E-11 102.7 13.4 52 737-789 507-561 (580)
60 TIGR03333 salvage_mtnX 2-hydro 98.5 7.7E-07 1.7E-11 91.0 10.9 130 659-798 69-208 (214)
61 PRK10530 pyridoxal phosphate ( 98.4 2.3E-06 5E-11 90.8 12.5 53 736-789 198-253 (272)
62 KOG1615 Phosphoserine phosphat 98.4 6.7E-07 1.5E-11 85.5 7.0 108 661-776 89-199 (227)
63 TIGR00099 Cof-subfamily Cof su 98.4 2.9E-06 6.3E-11 89.3 12.4 129 660-789 16-242 (256)
64 PF12710 HAD: haloacid dehalog 98.4 1.1E-06 2.3E-11 88.0 8.7 92 663-767 92-192 (192)
65 PLN02954 phosphoserine phospha 98.3 5.5E-06 1.2E-10 85.2 12.6 123 660-798 84-223 (224)
66 COG1778 Low specificity phosph 98.2 2.7E-06 6E-11 78.8 7.2 93 667-789 42-137 (170)
67 TIGR01488 HAD-SF-IB Haloacid D 98.2 3.8E-06 8.1E-11 82.9 8.1 101 661-769 74-177 (177)
68 TIGR01489 DKMTPPase-SF 2,3-dik 98.2 6.8E-06 1.5E-10 81.8 9.9 114 659-774 71-186 (188)
69 PRK09552 mtnX 2-hydroxy-3-keto 98.2 6.1E-06 1.3E-10 84.7 9.4 127 660-798 74-212 (219)
70 TIGR01490 HAD-SF-IB-hyp1 HAD-s 98.2 6.2E-06 1.4E-10 83.4 9.2 107 658-776 85-197 (202)
71 TIGR01486 HAD-SF-IIB-MPGP mann 98.1 1.8E-05 3.8E-10 83.4 11.4 125 661-786 17-232 (256)
72 PRK00192 mannosyl-3-phosphogly 98.1 1.8E-05 3.9E-10 84.1 11.0 43 659-701 20-62 (273)
73 PRK03669 mannosyl-3-phosphogly 98.0 5.7E-05 1.2E-09 80.2 11.8 40 661-700 25-64 (271)
74 COG0546 Gph Predicted phosphat 97.9 3.9E-05 8.3E-10 78.8 9.1 124 658-798 87-217 (220)
75 PRK13222 phosphoglycolate phos 97.9 3.7E-05 8.1E-10 79.0 8.9 121 659-798 92-221 (226)
76 cd01427 HAD_like Haloacid deha 97.9 2.4E-05 5.1E-10 72.9 6.6 117 656-773 20-137 (139)
77 TIGR02471 sucr_syn_bact_C sucr 97.8 0.00011 2.3E-09 76.4 10.2 52 736-788 158-212 (236)
78 TIGR02461 osmo_MPG_phos mannos 97.8 0.00012 2.7E-09 75.2 10.2 43 658-700 13-55 (225)
79 PRK08238 hypothetical protein; 97.8 0.00012 2.5E-09 83.4 10.3 103 660-787 72-175 (479)
80 TIGR01485 SPP_plant-cyano sucr 97.7 0.00018 3.9E-09 75.3 10.8 130 658-788 19-221 (249)
81 TIGR01454 AHBA_synth_RP 3-amin 97.7 9.1E-05 2E-09 75.1 7.9 119 660-798 75-203 (205)
82 TIGR02463 MPGP_rel mannosyl-3- 97.5 0.00087 1.9E-08 68.8 12.1 39 662-700 18-56 (221)
83 PRK10826 2-deoxyglucose-6-phos 97.5 0.0007 1.5E-08 69.5 10.7 118 659-796 91-217 (222)
84 PRK12702 mannosyl-3-phosphogly 97.5 0.00099 2.1E-08 69.7 11.4 43 659-701 17-59 (302)
85 PRK10187 trehalose-6-phosphate 97.4 0.00039 8.4E-09 73.5 8.4 121 660-781 36-224 (266)
86 TIGR01449 PGP_bact 2-phosphogl 97.4 0.00073 1.6E-08 68.8 9.7 117 660-796 85-211 (213)
87 PLN02382 probable sucrose-phos 97.3 0.0014 3E-08 73.6 11.8 125 661-786 29-230 (413)
88 PRK13223 phosphoglycolate phos 97.3 0.00065 1.4E-08 72.1 8.6 116 659-796 100-227 (272)
89 TIGR01484 HAD-SF-IIB HAD-super 97.3 0.0012 2.6E-08 66.7 10.2 116 660-775 17-204 (204)
90 PRK13288 pyrophosphatase PpaX; 97.3 0.00063 1.4E-08 69.4 8.0 118 661-798 83-210 (214)
91 TIGR01544 HAD-SF-IE haloacid d 97.3 0.0015 3.2E-08 68.5 10.0 93 658-767 119-228 (277)
92 PRK14502 bifunctional mannosyl 97.1 0.0023 4.9E-08 74.4 10.5 39 662-700 435-473 (694)
93 TIGR01548 HAD-SF-IA-hyp1 haloa 97.1 0.0012 2.5E-08 66.5 6.8 94 658-769 104-197 (197)
94 TIGR01545 YfhB_g-proteo haloac 97.0 0.0031 6.8E-08 64.1 9.8 107 660-776 94-201 (210)
95 PRK11590 hypothetical protein; 96.9 0.0054 1.2E-07 62.5 10.3 107 660-776 95-202 (211)
96 PRK13226 phosphoglycolate phos 96.9 0.0033 7.1E-08 64.9 8.5 119 660-797 95-223 (229)
97 PTZ00174 phosphomannomutase; P 96.8 0.0062 1.3E-07 63.7 10.3 51 736-788 187-242 (247)
98 TIGR01672 AphA HAD superfamily 96.8 0.0032 6.9E-08 64.9 7.8 86 662-771 116-205 (237)
99 PRK13225 phosphoglycolate phos 96.8 0.0043 9.3E-08 65.7 8.8 114 660-797 142-266 (273)
100 TIGR03351 PhnX-like phosphonat 96.8 0.0064 1.4E-07 62.2 9.9 120 659-798 86-219 (220)
101 TIGR01422 phosphonatase phosph 96.7 0.011 2.5E-07 61.9 10.6 92 660-771 99-195 (253)
102 PRK13478 phosphonoacetaldehyde 96.6 0.012 2.5E-07 62.3 10.6 97 660-776 101-205 (267)
103 PLN03243 haloacid dehalogenase 96.6 0.0056 1.2E-07 64.4 7.7 93 660-772 109-204 (260)
104 TIGR01662 HAD-SF-IIIA HAD-supe 96.5 0.015 3.3E-07 54.2 9.5 89 659-771 24-125 (132)
105 PRK11009 aphA acid phosphatase 96.5 0.0066 1.4E-07 62.6 7.2 85 660-772 114-206 (237)
106 TIGR01428 HAD_type_II 2-haloal 96.4 0.0085 1.8E-07 60.2 7.7 93 660-772 92-187 (198)
107 PRK14501 putative bifunctional 96.4 0.024 5.3E-07 68.8 12.3 152 612-780 480-703 (726)
108 PRK06769 hypothetical protein; 96.3 0.016 3.4E-07 57.1 8.7 105 647-774 11-134 (173)
109 PLN02770 haloacid dehalogenase 96.3 0.008 1.7E-07 62.9 6.7 96 660-772 108-203 (248)
110 COG4359 Uncharacterized conser 96.3 0.0092 2E-07 57.1 6.2 100 660-775 73-184 (220)
111 PRK11587 putative phosphatase; 96.3 0.016 3.6E-07 59.2 8.6 96 660-776 83-182 (218)
112 PRK06698 bifunctional 5'-methy 96.2 0.019 4.1E-07 65.8 9.8 118 660-797 330-452 (459)
113 TIGR01990 bPGM beta-phosphoglu 96.2 0.0066 1.4E-07 60.1 5.1 91 660-772 87-180 (185)
114 PF06888 Put_Phosphatase: Puta 96.2 0.014 3.1E-07 59.8 7.4 113 660-774 71-196 (234)
115 PRK14988 GMP/IMP nucleotidase; 96.1 0.018 3.9E-07 59.2 8.2 93 660-772 93-188 (224)
116 smart00775 LNS2 LNS2 domain. T 96.0 0.034 7.4E-07 53.7 9.1 102 658-771 25-140 (157)
117 PF05116 S6PP: Sucrose-6F-phos 96.0 0.012 2.6E-07 61.4 6.4 46 736-782 164-212 (247)
118 PF13419 HAD_2: Haloacid dehal 95.9 0.017 3.6E-07 56.1 6.4 95 659-772 76-172 (176)
119 TIGR01509 HAD-SF-IA-v3 haloaci 95.9 0.018 3.9E-07 56.7 6.6 92 660-771 85-178 (183)
120 COG2179 Predicted hydrolase of 95.9 0.039 8.4E-07 52.5 8.2 105 616-767 20-128 (175)
121 TIGR02009 PGMB-YQAB-SF beta-ph 95.8 0.015 3.3E-07 57.5 5.8 92 659-772 87-181 (185)
122 PHA02530 pseT polynucleotide k 95.8 0.016 3.4E-07 62.5 6.2 108 657-773 184-292 (300)
123 TIGR02253 CTE7 HAD superfamily 95.8 0.018 3.8E-07 58.9 6.3 97 660-776 94-195 (221)
124 TIGR01685 MDP-1 magnesium-depe 95.6 0.075 1.6E-06 52.1 9.7 114 649-775 34-155 (174)
125 COG4030 Uncharacterized protei 95.4 0.059 1.3E-06 53.4 7.8 126 660-789 83-247 (315)
126 TIGR01668 YqeG_hyp_ppase HAD s 95.4 0.057 1.2E-06 52.9 7.9 83 660-771 43-130 (170)
127 PRK08942 D,D-heptose 1,7-bisph 95.3 0.072 1.6E-06 52.7 8.5 97 660-772 29-142 (181)
128 TIGR02254 YjjG/YfnB HAD superf 95.2 0.039 8.5E-07 56.3 6.6 116 660-797 97-223 (224)
129 PRK09449 dUMP phosphatase; Pro 95.2 0.076 1.6E-06 54.4 8.7 118 660-798 95-222 (224)
130 TIGR01656 Histidinol-ppas hist 95.2 0.055 1.2E-06 51.6 7.0 96 660-772 27-140 (147)
131 PLN02575 haloacid dehalogenase 95.2 0.037 8E-07 60.9 6.4 94 660-772 216-311 (381)
132 PLN02811 hydrolase 95.0 0.062 1.3E-06 55.0 7.4 96 660-773 78-180 (220)
133 smart00577 CPDc catalytic doma 95.0 0.038 8.3E-07 52.8 5.4 93 659-774 44-139 (148)
134 PLN02940 riboflavin kinase 94.9 0.036 7.8E-07 61.8 5.6 94 660-772 93-189 (382)
135 TIGR01549 HAD-SF-IA-v1 haloaci 94.6 0.061 1.3E-06 51.5 5.7 88 661-770 65-154 (154)
136 TIGR01533 lipo_e_P4 5'-nucleot 94.4 0.19 4.2E-06 52.7 9.2 86 658-766 116-204 (266)
137 PRK05446 imidazole glycerol-ph 94.2 0.14 3.1E-06 56.0 8.0 98 659-773 29-144 (354)
138 PLN02779 haloacid dehalogenase 94.2 0.12 2.5E-06 55.4 7.2 97 660-776 144-245 (286)
139 PF13344 Hydrolase_6: Haloacid 94.2 0.11 2.4E-06 46.1 5.9 49 653-701 7-58 (101)
140 TIGR02252 DREG-2 REG-2-like, H 94.0 0.099 2.1E-06 52.6 6.0 91 660-771 105-199 (203)
141 TIGR01675 plant-AP plant acid 93.9 0.21 4.6E-06 51.0 8.1 88 658-763 118-209 (229)
142 PLN02205 alpha,alpha-trehalose 93.6 0.43 9.4E-06 58.5 11.5 77 612-704 584-664 (854)
143 TIGR01261 hisB_Nterm histidino 93.4 0.23 4.9E-06 48.2 7.0 92 660-773 29-143 (161)
144 TIGR01459 HAD-SF-IIA-hyp4 HAD- 93.3 0.31 6.7E-06 50.7 8.4 94 653-770 17-115 (242)
145 TIGR01686 FkbH FkbH-like domai 92.9 0.35 7.5E-06 52.6 8.4 91 660-775 31-128 (320)
146 TIGR01664 DNA-3'-Pase DNA 3'-p 92.9 0.42 9E-06 46.6 8.1 91 661-773 43-158 (166)
147 TIGR01681 HAD-SF-IIIC HAD-supe 92.7 0.31 6.6E-06 45.3 6.5 39 660-698 29-68 (128)
148 COG3769 Predicted hydrolase (H 92.7 0.79 1.7E-05 45.6 9.4 37 664-700 27-63 (274)
149 TIGR01691 enolase-ppase 2,3-di 92.5 0.31 6.8E-06 49.8 6.8 95 657-773 92-192 (220)
150 PF09419 PGP_phosphatase: Mito 92.4 0.57 1.2E-05 45.5 8.2 75 657-759 56-145 (168)
151 TIGR02247 HAD-1A3-hyp Epoxide 91.7 0.15 3.4E-06 51.6 3.5 94 659-772 93-191 (211)
152 TIGR00685 T6PP trehalose-phosp 91.5 0.32 6.9E-06 50.7 5.7 65 729-796 159-237 (244)
153 TIGR00213 GmhB_yaeD D,D-heptos 91.3 0.62 1.3E-05 45.8 7.2 27 661-687 27-53 (176)
154 PLN02919 haloacid dehalogenase 90.0 0.7 1.5E-05 58.3 7.8 92 661-771 162-256 (1057)
155 PHA02597 30.2 hypothetical pro 89.3 1 2.2E-05 45.0 7.0 93 660-772 74-169 (197)
156 PRK09456 ?-D-glucose-1-phospha 88.5 0.57 1.2E-05 47.0 4.5 94 660-773 84-181 (199)
157 PF03767 Acid_phosphat_B: HAD 88.0 0.73 1.6E-05 47.4 5.0 90 659-765 114-207 (229)
158 PLN02645 phosphoglycolate phos 87.9 1.2 2.6E-05 48.3 6.8 49 653-701 37-88 (311)
159 KOG3120 Predicted haloacid deh 87.7 0.69 1.5E-05 46.1 4.3 120 660-782 84-215 (256)
160 TIGR01993 Pyr-5-nucltdase pyri 87.6 0.89 1.9E-05 44.9 5.2 91 660-772 84-180 (184)
161 PRK10563 6-phosphogluconate ph 86.9 0.91 2E-05 46.3 5.0 92 660-774 88-183 (221)
162 PRK10725 fructose-1-P/6-phosph 85.6 1.3 2.9E-05 43.6 5.3 89 662-772 90-181 (188)
163 PLN02580 trehalose-phosphatase 85.3 0.97 2.1E-05 49.9 4.4 45 736-781 300-355 (384)
164 PLN02423 phosphomannomutase 84.9 5.3 0.00012 41.6 9.6 39 736-776 188-231 (245)
165 TIGR01684 viral_ppase viral ph 84.6 2.1 4.5E-05 45.3 6.2 52 661-712 146-198 (301)
166 TIGR01458 HAD-SF-IIA-hyp3 HAD- 84.2 2.8 6.1E-05 44.0 7.2 50 653-702 10-66 (257)
167 TIGR01680 Veg_Stor_Prot vegeta 83.3 4.6 0.0001 42.3 8.1 89 658-763 143-235 (275)
168 PRK10444 UMP phosphatase; Prov 83.1 3.6 7.7E-05 43.0 7.4 49 653-701 10-61 (248)
169 TIGR01647 ATPase-IIIA_H plasma 82.9 25 0.00053 43.1 15.5 159 244-430 111-270 (755)
170 PHA03398 viral phosphatase sup 82.8 2.8 6E-05 44.4 6.2 51 661-711 148-199 (303)
171 PF08235 LNS2: LNS2 (Lipin/Ned 82.4 5.9 0.00013 38.0 7.8 108 654-772 22-141 (157)
172 TIGR01106 ATPase-IIC_X-K sodiu 81.9 36 0.00077 43.2 16.8 194 211-427 118-325 (997)
173 TIGR01657 P-ATPase-V P-type AT 81.7 66 0.0014 41.1 19.2 107 165-292 162-273 (1054)
174 PLN03017 trehalose-phosphatase 81.1 19 0.00042 39.6 12.2 47 647-694 118-166 (366)
175 PF00403 HMA: Heavy-metal-asso 81.0 0.12 2.6E-06 41.1 -3.6 53 43-97 10-62 (62)
176 COG0637 Predicted phosphatase/ 79.6 3.3 7.1E-05 42.4 5.6 96 659-773 85-182 (221)
177 TIGR02251 HIF-SF_euk Dullard-l 78.9 2.1 4.5E-05 41.5 3.6 87 660-771 42-133 (162)
178 TIGR01452 PGP_euk phosphoglyco 78.7 8.4 0.00018 40.9 8.5 49 653-701 11-62 (279)
179 TIGR01116 ATPase-IIA1_Ca sarco 77.2 65 0.0014 40.5 16.9 80 204-293 36-116 (917)
180 PRK10748 flavin mononucleotide 76.0 6 0.00013 40.9 6.4 90 660-775 113-206 (238)
181 TIGR01457 HAD-SF-IIA-hyp2 HAD- 75.1 5.8 0.00013 41.4 6.0 50 653-702 10-62 (249)
182 TIGR01689 EcbF-BcbF capsule bi 73.1 11 0.00024 34.8 6.5 32 659-690 23-54 (126)
183 TIGR01493 HAD-SF-IA-v2 Haloaci 73.1 2.7 5.9E-05 40.9 2.8 83 660-769 90-175 (175)
184 PLN02177 glycerol-3-phosphate 72.5 16 0.00036 42.0 9.2 98 661-777 111-215 (497)
185 COG1011 Predicted hydrolase (H 70.5 17 0.00037 36.9 8.1 90 660-771 99-193 (229)
186 COG0241 HisB Histidinol phosph 70.5 13 0.00028 36.6 6.7 96 661-772 32-144 (181)
187 TIGR01663 PNK-3'Pase polynucle 69.9 16 0.00035 42.4 8.4 40 661-700 198-249 (526)
188 PRK15122 magnesium-transportin 69.9 1.9E+02 0.0042 36.3 18.4 159 244-428 173-351 (903)
189 PRK10517 magnesium-transportin 67.0 2E+02 0.0044 36.0 17.8 43 244-287 184-226 (902)
190 COG3700 AphA Acid phosphatase 66.6 17 0.00036 35.3 6.2 86 661-771 115-205 (237)
191 TIGR01524 ATPase-IIIB_Mg magne 65.2 1.3E+02 0.0027 37.7 15.5 42 244-286 150-191 (867)
192 TIGR01522 ATPase-IIA2_Ca golgi 64.5 2.3E+02 0.005 35.5 17.6 163 245-430 137-308 (884)
193 PRK01122 potassium-transportin 63.8 3.3E+02 0.0072 32.9 18.4 34 259-292 112-147 (679)
194 PTZ00445 p36-lilke protein; Pr 63.1 14 0.00031 37.1 5.4 135 610-771 29-199 (219)
195 PF02358 Trehalose_PPase: Treh 61.9 15 0.00032 37.9 5.6 51 729-780 157-219 (235)
196 PF00122 E1-E2_ATPase: E1-E2 A 61.4 1.1E+02 0.0024 31.0 12.1 195 210-433 2-213 (230)
197 KOG3040 Predicted sugar phosph 59.5 18 0.00038 36.1 5.2 50 651-700 14-66 (262)
198 TIGR01460 HAD-SF-IIA Haloacid 55.9 51 0.0011 33.9 8.4 48 653-700 7-58 (236)
199 PF12689 Acid_PPase: Acid Phos 55.1 36 0.00078 33.2 6.6 41 660-700 45-86 (169)
200 COG1877 OtsB Trehalose-6-phosp 51.1 1E+02 0.0022 32.4 9.6 132 650-781 30-233 (266)
201 PF13380 CoA_binding_2: CoA bi 50.4 17 0.00037 33.0 3.4 39 662-700 65-104 (116)
202 COG0647 NagD Predicted sugar p 47.3 22 0.00048 37.5 4.0 44 653-696 17-60 (269)
203 TIGR00262 trpA tryptophan synt 45.9 1.1E+02 0.0023 32.1 9.0 96 658-776 122-227 (256)
204 PLN02591 tryptophan synthase 43.5 1.3E+02 0.0028 31.4 9.0 97 663-784 118-223 (250)
205 PLN02151 trehalose-phosphatase 43.0 1.9E+02 0.004 31.9 10.4 47 648-695 106-154 (354)
206 PF03120 DNA_ligase_OB: NAD-de 42.0 12 0.00026 31.6 0.9 20 253-272 47-67 (82)
207 TIGR01458 HAD-SF-IIA-hyp3 HAD- 40.6 1.4E+02 0.003 31.2 8.9 121 662-798 122-254 (257)
208 PF00389 2-Hacid_dh: D-isomer 40.3 1.2E+02 0.0027 27.8 7.6 84 657-776 3-89 (133)
209 TIGR01456 CECR5 HAD-superfamil 39.3 93 0.002 33.7 7.6 49 653-701 9-65 (321)
210 TIGR02250 FCP1_euk FCP1-like p 39.2 47 0.001 31.9 4.7 41 659-700 57-97 (156)
211 PF15584 Imm44: Immunity prote 37.1 15 0.00033 31.4 0.8 19 258-276 13-31 (94)
212 PF12710 HAD: haloacid dehalog 36.6 17 0.00036 35.7 1.2 13 453-465 1-13 (192)
213 CHL00200 trpA tryptophan synth 35.4 1.7E+02 0.0037 30.8 8.4 98 658-776 126-231 (263)
214 TIGR00216 ispH_lytB (E)-4-hydr 35.4 1.5E+02 0.0033 31.4 8.1 141 610-779 100-265 (280)
215 cd00860 ThrRS_anticodon ThrRS 35.3 81 0.0018 26.4 5.2 47 654-700 6-53 (91)
216 cd04724 Tryptophan_synthase_al 34.0 1.4E+02 0.003 31.0 7.5 96 663-784 116-220 (242)
217 COG2608 CopZ Copper chaperone 33.8 4 8.6E-05 33.5 -3.2 54 44-99 15-68 (71)
218 TIGR01523 ATPase-IID_K-Na pota 33.5 8.4E+02 0.018 31.3 15.6 41 245-286 138-178 (1053)
219 PRK04302 triosephosphate isome 32.9 1E+02 0.0022 31.4 6.3 99 662-776 100-202 (223)
220 cd00429 RPE Ribulose-5-phospha 32.9 2.1E+02 0.0046 28.4 8.6 36 663-698 92-129 (211)
221 COG3329 Predicted permease [Ge 32.4 2.1E+02 0.0046 30.5 8.2 68 137-204 181-248 (372)
222 PRK14170 bifunctional 5,10-met 32.2 65 0.0014 34.2 4.7 45 657-701 10-63 (284)
223 PRK14194 bifunctional 5,10-met 32.1 62 0.0014 34.7 4.6 45 657-701 12-65 (301)
224 PF01455 HupF_HypC: HupF/HypC 31.7 1E+02 0.0022 25.0 4.8 33 237-269 16-51 (68)
225 PF05822 UMPH-1: Pyrimidine 5' 31.5 99 0.0021 32.1 5.7 46 659-704 89-134 (246)
226 PRK14010 potassium-transportin 30.9 1E+03 0.022 28.8 18.0 88 604-700 438-527 (673)
227 TIGR00612 ispG_gcpE 1-hydroxy- 30.7 1.6E+02 0.0035 31.9 7.2 93 665-776 212-315 (346)
228 TIGR00640 acid_CoA_mut_C methy 30.6 4.4E+02 0.0096 24.4 10.5 105 650-783 5-117 (132)
229 PF12304 BCLP: Beta-casein lik 30.5 3.6E+02 0.0077 26.5 8.8 90 330-433 23-112 (188)
230 cd05017 SIS_PGI_PMI_1 The memb 29.8 92 0.002 28.1 4.8 38 661-700 55-92 (119)
231 TIGR01494 ATPase_P-type ATPase 29.3 3.7E+02 0.008 31.1 10.9 171 244-444 53-230 (499)
232 PRK14175 bifunctional 5,10-met 29.1 65 0.0014 34.3 4.1 45 657-701 11-64 (286)
233 PRK14169 bifunctional 5,10-met 28.9 73 0.0016 33.8 4.4 45 657-701 9-62 (282)
234 TIGR03128 RuMP_HxlA 3-hexulose 28.8 3.2E+02 0.0069 27.2 9.0 37 664-700 90-128 (206)
235 TIGR01517 ATPase-IIB_Ca plasma 28.7 1.3E+03 0.028 29.2 18.9 176 244-430 185-360 (941)
236 PRK11507 ribosome-associated p 28.3 67 0.0015 26.3 3.1 26 241-266 38-63 (70)
237 PF05240 APOBEC_C: APOBEC-like 27.6 65 0.0014 25.1 2.7 23 663-685 2-24 (55)
238 PRK14184 bifunctional 5,10-met 27.3 90 0.002 33.2 4.8 45 657-701 9-63 (286)
239 PRK13747 putative mercury resi 27.1 49 0.0011 27.1 2.0 24 397-422 15-38 (78)
240 TIGR01163 rpe ribulose-phospha 26.8 3.4E+02 0.0074 26.9 8.9 21 662-682 90-110 (210)
241 PRK14190 bifunctional 5,10-met 26.5 84 0.0018 33.4 4.4 45 657-701 11-64 (284)
242 PRK14182 bifunctional 5,10-met 26.4 98 0.0021 32.8 4.8 45 657-701 9-62 (282)
243 PF03129 HGTP_anticodon: Antic 26.3 1.3E+02 0.0028 25.6 4.9 48 653-700 3-54 (94)
244 cd01994 Alpha_ANH_like_IV This 25.8 3E+02 0.0065 27.4 8.0 37 664-700 11-60 (194)
245 PRK14167 bifunctional 5,10-met 25.7 96 0.0021 33.2 4.6 45 657-701 10-63 (297)
246 TIGR02244 HAD-IG-Ncltidse HAD 25.7 1.2E+02 0.0026 33.2 5.5 106 662-771 186-317 (343)
247 COG0272 Lig NAD-dependent DNA 25.7 1.2E+02 0.0027 35.9 5.8 53 645-700 594-655 (667)
248 PRK14191 bifunctional 5,10-met 25.5 96 0.0021 33.0 4.6 45 657-701 9-63 (285)
249 PRK14172 bifunctional 5,10-met 25.3 1E+02 0.0023 32.6 4.8 45 657-701 10-64 (278)
250 PRK05581 ribulose-phosphate 3- 25.1 3.6E+02 0.0077 27.0 8.7 36 663-698 96-133 (220)
251 PRK13125 trpA tryptophan synth 24.9 3.6E+02 0.0079 27.8 8.8 98 663-784 116-219 (244)
252 PRK09479 glpX fructose 1,6-bis 24.8 1.7E+02 0.0037 31.3 6.1 94 655-768 161-283 (319)
253 cd00859 HisRS_anticodon HisRS 24.5 1.4E+02 0.003 24.6 4.8 47 654-700 6-53 (91)
254 PRK01045 ispH 4-hydroxy-3-meth 24.5 2.7E+02 0.0059 29.9 7.7 142 610-780 100-267 (298)
255 smart00306 HintN Hint (Hedgeho 24.3 88 0.0019 26.7 3.5 29 237-265 71-99 (100)
256 PRK13111 trpA tryptophan synth 24.1 4.1E+02 0.0088 27.9 8.9 93 662-776 128-228 (258)
257 PRK14174 bifunctional 5,10-met 24.0 1.1E+02 0.0024 32.7 4.7 45 657-701 9-63 (295)
258 TIGR03127 RuMP_HxlB 6-phospho 23.8 3.7E+02 0.0079 26.0 8.2 102 663-776 18-124 (179)
259 TIGR01501 MthylAspMutase methy 23.5 3E+02 0.0065 25.7 6.9 54 648-701 52-113 (134)
260 KOG1250 Threonine/serine dehyd 22.9 2.1E+02 0.0046 31.7 6.5 75 664-767 100-177 (457)
261 PF13275 S4_2: S4 domain; PDB: 22.8 51 0.0011 26.6 1.4 23 242-264 35-57 (65)
262 COG0474 MgtA Cation transport 22.6 1.6E+03 0.035 28.3 17.8 197 211-429 117-331 (917)
263 PRK09140 2-dehydro-3-deoxy-6-p 22.6 7.1E+02 0.015 25.0 10.1 102 665-779 72-181 (206)
264 COG0078 ArgF Ornithine carbamo 22.4 3.5E+02 0.0075 29.0 7.8 85 664-776 91-181 (310)
265 COG1188 Ribosome-associated he 22.0 95 0.0021 27.3 3.0 28 242-270 36-63 (100)
266 PRK14179 bifunctional 5,10-met 21.4 1.6E+02 0.0035 31.3 5.3 45 657-701 10-64 (284)
267 cd05013 SIS_RpiR RpiR-like pro 21.1 3.8E+02 0.0081 24.1 7.4 107 664-776 2-112 (139)
268 PRK14166 bifunctional 5,10-met 21.1 1.4E+02 0.003 31.7 4.7 45 657-701 9-62 (282)
269 COG0159 TrpA Tryptophan syntha 21.0 3.1E+02 0.0066 28.9 7.1 62 677-748 19-91 (265)
270 TIGR01459 HAD-SF-IIA-hyp4 HAD- 21.0 67 0.0014 33.1 2.4 92 662-772 140-236 (242)
271 cd02071 MM_CoA_mut_B12_BD meth 20.7 1.6E+02 0.0035 26.7 4.6 55 647-701 49-105 (122)
272 TIGR00381 cdhD CO dehydrogenas 20.6 6E+02 0.013 28.2 9.5 98 664-766 144-257 (389)
273 PF09926 DUF2158: Uncharacteri 20.5 63 0.0014 24.9 1.5 12 257-268 2-13 (53)
274 PRK14185 bifunctional 5,10-met 20.4 1.6E+02 0.0034 31.5 4.9 45 657-701 9-63 (293)
275 PF12017 Tnp_P_element: Transp 20.3 1.4E+02 0.003 30.8 4.4 37 665-701 198-234 (236)
276 PF08645 PNK3P: Polynucleotide 20.3 88 0.0019 30.1 2.9 23 662-684 31-53 (159)
277 PRK06788 flagellar motor switc 20.2 1.4E+02 0.003 27.3 3.9 71 249-335 40-111 (119)
278 cd01019 ZnuA Zinc binding prot 20.2 2.3E+02 0.0049 30.2 6.3 54 647-700 196-253 (286)
279 cd00738 HGTP_anticodon HGTP an 20.1 1.7E+02 0.0038 24.5 4.5 47 654-700 6-56 (94)
280 cd00958 DhnA Class I fructose- 20.1 4E+02 0.0087 27.1 8.0 23 659-681 105-127 (235)
281 cd05014 SIS_Kpsf KpsF-like pro 20.0 1E+02 0.0023 27.8 3.3 28 662-689 60-87 (128)
No 1
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.2e-178 Score=1457.78 Aligned_cols=772 Identities=59% Similarity=0.879 Sum_probs=725.8
Q ss_pred cccccCCCCCCCCCcHHHHHHHHHhhhcccccccccccccccchhhHHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCC
Q 003740 4 YLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSS 83 (799)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~r~f~~~~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 83 (799)
++.++|. .+.+|++.++++|||.|. .++|++|||||..++++..+....|+ +.|+...+.+|+..|.++. +.+
T Consensus 2 ~~~~~~~-~~~~n~~~~~~~~~~~a~-~~~~~~~~~~~~~~l~~~~~~~~~r~----~~r~~~~~~~a~~~~~~~~-~~~ 74 (1034)
T KOG0204|consen 2 LLDKDFV-VSMKNSSIEALQRWRLAY-IVLEASRRFRFGASLKKLRELMEPRR----KIRSAVLVSKAAALFIDAG-SRT 74 (1034)
T ss_pred Ccccccc-cccccchhhhhhhhhhhh-hhcccchhhccccCHHHHHHHHHHHh----hhhhhhcccchhhhhhccc-ccc
Confidence 4566776 788899999999999888 99999999999999988886555554 8899999999999998873 222
Q ss_pred ccccccccccCCcccChhhhhhhhccCChHHHHhhCCHHHHHHHhCCCccCCCCccHHHHHHHHHhcCCCccCCCCCccH
Q 003740 84 EYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGF 163 (799)
Q Consensus 84 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~v~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~g~N~~~~~~~~~f 163 (799)
++.+ +++++++.++++.++.+.|+.+||++|||+.|+||+..||+.+++++.+|++.||+|.+|++++++|
T Consensus 75 e~~~---------~i~~e~l~~i~~~~~~~~L~~~gGv~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~F 145 (1034)
T KOG0204|consen 75 EYTL---------GIGAEELVKIVKEHDLKALNAYGGVEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYPEKPPKGF 145 (1034)
T ss_pred cccc---------ccCHHHHHHHhhccchhhhhhccCHHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCCCCCCccH
Confidence 2211 7888999999999999999999999999999999999999998888999999999999999999999
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCceeEEE
Q 003740 164 WVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVA 243 (799)
Q Consensus 164 ~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~~~~~d~~~i~~~illv~~~~~~~~~~~~~~~~~l~~~~~~~~v~V~ 243 (799)
|+++|++++|.+++||++||++|+.+++++++++++||||++|+++++++++++|+++|+|++||++|+++..+.++.|+
T Consensus 146 l~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~GW~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~~~k~~Vi 225 (1034)
T KOG0204|consen 146 LRFVWEALQDVTLIILMVAAVVSLGLGIYTPGIEDGWIEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKRNIKFQVI 225 (1034)
T ss_pred HHHHHHHhccchHHHHHHHHHHHHhhhhccCCCCcccccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhhceEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCeEEEEecCCCCcccEEEecCCCeecccEEEEeeceeEEecccccCCCCccccCC-CCCEEEccceeeeceEEEEEEE
Q 003740 244 RNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA-LNPFLLSGTKVQNGSCKMLVTT 322 (799)
Q Consensus 244 R~g~~~~i~~~~LvvGDiv~l~~Gd~vPaDg~ll~g~~l~vDeS~lTGEs~pv~k~~-~~~~v~sGt~v~~G~~~~~V~~ 322 (799)
|||++++|++.|||||||++|+.||++||||++++|++|.+|||+|||||++++|+. .+||++|||++++|+++|+||+
T Consensus 226 R~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~gn~L~iDESSlTGESd~v~k~~~~dPfLlSGTkv~eGsgkMlVTa 305 (1034)
T KOG0204|consen 226 RGGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQGNSLKIDESSLTGESDHVQKSLDKDPFLLSGTKVMEGSGKMLVTA 305 (1034)
T ss_pred ECCEEEEEEEeeeeeccEEEeecCCccccceEEEeccceeEecccccCCCcceeccCCCCCeEeecceeecCcceEEEEE
Confidence 999999999999999999999999999999999999999999999999999999986 8999999999999999999999
Q ss_pred EcccchhHHHHHhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCc--cccCCcchHHHHHH
Q 003740 323 VGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTH--WTWSGDDALEILEF 400 (799)
Q Consensus 323 vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 400 (799)
||+||+||++|..+.+..+++||||.+|+++|..|+++++++|+++|+++++||+......+.. +.|.......++++
T Consensus 306 VGmnt~wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~ 385 (1034)
T KOG0204|consen 306 VGMNTQWGIIMTLLGAGGEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKF 385 (1034)
T ss_pred eeecchHhhHHHhhhcCCCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHH
Confidence 9999999999999999998999999999999999999999999999999999999887665543 56666667889999
Q ss_pred HHHHHHHHHHHhCCchhHHHHHHHHHHHHHHhhhhhhhcccchhhccCCceeEeecCCCccccCceEEEEEEEcCeeeee
Q 003740 401 FAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480 (799)
Q Consensus 401 ~~~av~ilvva~P~~Lplav~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~ 480 (799)
|.++++++|||+|||||||||++|||+++||+++++|||+++||||||++++||+|||||||+|+|+|++.|++++.+..
T Consensus 386 f~i~VTilVVAVPEGLPLAVTLsLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~ 465 (1034)
T KOG0204|consen 386 FIIAVTILVVAVPEGLPLAVTLSLAYSMKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKV 465 (1034)
T ss_pred hhheeEEEEEECCCCccHHHHHHHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999887654
Q ss_pred cCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCC--ceEEcCCchHHHHHHHHHHcCCChHHHhhhcceEEEecC
Q 003740 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGN--KTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPF 558 (799)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~--~~~~~g~p~e~All~~~~~~g~~~~~~~~~~~i~~~~~F 558 (799)
+... .+.+++.+.+++.++++.|+++++..++.+ .++++|+|||+|||.|+..+|++++..|.+.++++++||
T Consensus 466 ~~~~-----~~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~v~kv~~F 540 (1034)
T KOG0204|consen 466 NSPK-----SSNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQDVRPEEKVVKVYPF 540 (1034)
T ss_pred cCcc-----cccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchHhhcchhheeEEecc
Confidence 3321 257899999999999999999999987765 889999999999999999999999999999999999999
Q ss_pred CCCCceEEEEEEeCCCc-EEEEEcCchHHHHHhcccccccCCeEeeCCHHHHHHHHHHHHHHHHhccceeeEEEEEcCCC
Q 003740 559 NSVKKQMGVVIELPEGG-FRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNE 637 (799)
Q Consensus 559 ~s~~k~~~vv~~~~~~~-~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~ 637 (799)
||.||+|+++++.++++ | +|||||+|+||++|++|++.+|+..+++++.+..+++.|+.||++|+||+|+|||++...
T Consensus 541 NS~kK~~gvvi~~~~~~~y-~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~ 619 (1034)
T KOG0204|consen 541 NSVKKRMGVVIKLPDGGHY-VHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAG 619 (1034)
T ss_pred CcccceeeEEEEcCCCCeE-EEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccC
Confidence 99999999999988877 6 999999999999999999999999999999999999999999999999999999996543
Q ss_pred ----CC-CCCCCCCCcceeeeeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCc--eeecch
Q 003740 638 ----FS-ADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG--IAIEGP 710 (799)
Q Consensus 638 ----~~-~~~~~~~~~~~~lg~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~--~~~~g~ 710 (799)
++ +.+..++.+++++|++||+||+||||++||+.||+|||+|+|+||||..||+|||.+|||+++++ .+++|+
T Consensus 620 ~~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~ 699 (1034)
T KOG0204|consen 620 PDEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGK 699 (1034)
T ss_pred CCCCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecch
Confidence 22 22357789999999999999999999999999999999999999999999999999999999988 999999
Q ss_pred hhhccCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC-
Q 003740 711 EFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF- 789 (799)
Q Consensus 711 ~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi- 789 (799)
+|++++++++++++|+++|+||+||.||+.+|+.|+++ ||+||+||||+||+||||+||||+||||+|||||||+|||
T Consensus 700 eFr~~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~-g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDII 778 (1034)
T KOG0204|consen 700 EFRELSQEERDKIWPKLRVLARSSPNDKHLLVKGLIKQ-GEVVAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDII 778 (1034)
T ss_pred hhhhcCHHHHHhhhhhheeeecCCCchHHHHHHHHHhc-CcEEEEecCCCCCchhhhhcccchhccccchhhhhhhCCeE
Confidence 99999999999999999999999999999999999998 9999999999999999999999999999999999999999
Q ss_pred ----ChHhHHHhh
Q 003740 790 ----NFSSRKTYI 798 (799)
Q Consensus 790 ----nf~si~~~i 798 (799)
||+|||+++
T Consensus 779 i~DDNFssIVk~v 791 (1034)
T KOG0204|consen 779 ILDDNFSSIVKAV 791 (1034)
T ss_pred EEcCchHHHHHHH
Confidence 999999986
No 2
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.1e-126 Score=1051.98 Aligned_cols=660 Identities=35% Similarity=0.532 Sum_probs=575.4
Q ss_pred CCHHHHHHHhCCCccCCCCccHHHHHHHHHhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhhcccCCCC
Q 003740 119 GGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPK 198 (799)
Q Consensus 119 ~~v~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~g~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~~ 198 (799)
..++..+..|.|++..||+.++ +.+|++.||+|+++...++|+|+.+++||.++.+.+|+++|++|++++.
T Consensus 7 ~~v~e~~~~f~t~~~~GLt~~e--v~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~~------- 77 (972)
T KOG0202|consen 7 KSVSEVLAEFGTDLEEGLTSDE--VTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLAD------- 77 (972)
T ss_pred CcHHHHHHHhCcCcccCCCHHH--HHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHh-------
Confidence 4588899999999999999987 9999999999999999999999999999999999999999999999874
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCceeEEEeCCeEEEEecCCCCcccEEEecCCCeecccEEEEe
Q 003740 199 GAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVS 278 (799)
Q Consensus 199 ~~~d~~~i~~~illv~~~~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~i~~~~LvvGDiv~l~~Gd~vPaDg~ll~ 278 (799)
|-|+++|.+++++++.+..+++|+.++..+.|.+ +.+..++|+|+|+.+.++++||||||||.|+.||+||||.++++
T Consensus 78 -~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~-l~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e 155 (972)
T KOG0202|consen 78 -FDEPFVITLIIVINVTVGFVQEYNAEKALEALKE-LVPPMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADLRLIE 155 (972)
T ss_pred -cccceeeeeeeeeeeeeeeeeehhhHHHHHHHHh-cCCccceEEecCcccceehhccCCCCEEEEecCCccccceeEEe
Confidence 4578899999999999999999999999999997 55669999999999999999999999999999999999999999
Q ss_pred eceeEEecccccCCCCccccC-------------CCCCEEEccceeeeceEEEEEEEEcccchhHHHHHhhcCCCCCCCh
Q 003740 279 GFSVLINESSLTGESEPVNVN-------------ALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETP 345 (799)
Q Consensus 279 g~~l~vDeS~lTGEs~pv~k~-------------~~~~~v~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tp 345 (799)
..++.+|||+|||||.|+.|. ...+++|+||.|..|.++++|++||.+|++|+|...+++.++++||
T Consensus 156 ~~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~e~~kTP 235 (972)
T KOG0202|consen 156 AKSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQATESPKTP 235 (972)
T ss_pred eeeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHhccCCCCCc
Confidence 999999999999999999994 2346899999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcchHHHHHHHHHHHHHHHHHhCCchhHHHHHHHH
Q 003740 346 LQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLA 425 (799)
Q Consensus 346 lq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvva~P~~Lplav~l~l~ 425 (799)
||+++|.+...+..+..++++.++++- +++|.. ..++ +..+..+..+|.+++++.|.|+|||||..+|++|+
T Consensus 236 Lqk~ld~~G~qLs~~is~i~v~v~~~n-ig~f~~-p~~~------g~~fk~~~~~f~IaVsLAVAAIPEGLPaVvT~tLA 307 (972)
T KOG0202|consen 236 LQKKLDEFGKQLSKVISFICVGVWLLN-IGHFLD-PVHG------GSWFKGALYYFKIAVSLAVAAIPEGLPAVVTTTLA 307 (972)
T ss_pred HHHHHHHHHHHHHHHheehhhhHHHhh-hhhhcc-cccc------ccchhchhhhhhHHHHHHHHhccCCCcchhhhhHH
Confidence 999999999999876655555444331 122221 0111 11223577899999999999999999999999999
Q ss_pred HHHHHHhhhhhhhcccchhhccCCceeEeecCCCccccCceEEEEEEEcCeeeeec------CCCC-------CCC---C
Q 003740 426 FAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVD------NSKG-------TPA---F 489 (799)
Q Consensus 426 ~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~------~~~~-------~~~---~ 489 (799)
.+.+||+|++++||++.++||||.+++||+|||||||+|+|++.++|+.+...... .... .+. .
T Consensus 308 LG~~rMakknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~ 387 (972)
T KOG0202|consen 308 LGTRRMAKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDGLYEK 387 (972)
T ss_pred HhHHHHHhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEecCcccc
Confidence 99999999999999999999999999999999999999999999999986543211 0000 000 0
Q ss_pred CCCCChhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHH---------------HhhhcceEE
Q 003740 490 GSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQA---------------ERQASKIVK 554 (799)
Q Consensus 490 ~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~g~~~~~---------------~~~~~~i~~ 554 (799)
......+.+.-+.+..++|+.+.+..+..+.++..|.|||.||..++.++++.-.. ..+.++.+.
T Consensus 388 ~~~~~~~~l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~ 467 (972)
T KOG0202|consen 388 DKAGDNDLLQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRLFKKIA 467 (972)
T ss_pred ccccccHHHHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcccccccccchhHHHHhhhhee
Confidence 11223344555556666666777776654666779999999999999998875322 233456678
Q ss_pred EecCCCCCceEEEEEEeCCC--cEEEEEcCchHHHHHhcccccccCC-eEeeCCHHHHHHHHHHHHHHHHhccceeeEEE
Q 003740 555 VEPFNSVKKQMGVVIELPEG--GFRVHCKGASEIILAACDKFLNSNG-EVVPLNEAAVNHLNETIEKFASEALRTLCLAC 631 (799)
Q Consensus 555 ~~~F~s~~k~~~vv~~~~~~--~~~~~~KGa~e~il~~c~~~~~~~g-~~~~l~~~~~~~~~~~~~~~a~~g~r~l~~a~ 631 (799)
.+||+|+||+|+|.+..+.+ ++.+|+|||+|.||++|++++..+| ...||++..|+.+.+...+|+++|+||+++|+
T Consensus 468 elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~ 547 (972)
T KOG0202|consen 468 ELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALAS 547 (972)
T ss_pred EeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEc
Confidence 99999999999999985544 5899999999999999998887776 55999999999999999999999999999999
Q ss_pred EEcCCC--------CCCCCCCCCCcceeeeeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC
Q 003740 632 MEIGNE--------FSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN 703 (799)
Q Consensus 632 ~~~~~~--------~~~~~~~~~~~~~~lg~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~ 703 (799)
++.+.. .+..+...|.+|+|+|++|+.||||++++++|+.|+++||+|+|+||||..||.+||+++||...+
T Consensus 548 ~~~~~~~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ 627 (972)
T KOG0202|consen 548 KDSPGQVPDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSED 627 (972)
T ss_pred cCCcccChhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCC
Confidence 987741 122345668999999999999999999999999999999999999999999999999999999876
Q ss_pred c----eeecchhhhccCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCC
Q 003740 704 G----IAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAG 779 (799)
Q Consensus 704 ~----~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~g 779 (799)
. .+++|++|+.++++++.+...+..||||++|++|.++|+.||++ |++|||||||+|||||||.||||||||++|
T Consensus 628 ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~-geivAMTGDGVNDApALK~AdIGIAMG~~G 706 (972)
T KOG0202|consen 628 EDVSSMALTGSEFDDLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSR-GEVVAMTGDGVNDAPALKKADIGIAMGISG 706 (972)
T ss_pred ccccccccchhhhhcCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhc-CCEEEecCCCccchhhhhhcccceeecCCc
Confidence 6 89999999999999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred CHHHHHhcCC-----ChHhHHHhh
Q 003740 780 TEVELECCCF-----NFSSRKTYI 798 (799)
Q Consensus 780 tevak~aaDi-----nf~si~~~i 798 (799)
|||||||||+ ||+||+.++
T Consensus 707 TdVaKeAsDMVL~DDnFstIvaAV 730 (972)
T KOG0202|consen 707 TDVAKEASDMVLADDNFSTIVAAV 730 (972)
T ss_pred cHhhHhhhhcEEecCcHHHHHHHH
Confidence 9999999999 999999986
No 3
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=9.1e-120 Score=1100.07 Aligned_cols=696 Identities=50% Similarity=0.768 Sum_probs=610.0
Q ss_pred ccCCcccChhhhhhhhcc-CChHHHHhhCCHHHHHHHhCCCccCCCCccHHHHHHHHHhcCCCccCCCCCccHHHHHHHH
Q 003740 92 AASGFQICPDELGSIVEG-HDIKKLKVHGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEA 170 (799)
Q Consensus 92 ~~~g~~~~~~~~~~~~~~-~~~~~l~~~~~v~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~g~N~~~~~~~~~f~~~~~~~ 170 (799)
...||.+.-.++.++.+. ++.+.|+.+||++++++.|+++...||+.+++++.+|+++||+|+++.+++++||+.+|++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~t~~~~GLs~~~~ev~~r~~~yG~N~l~~~~~~s~~~~~~~~ 93 (941)
T TIGR01517 14 FTDGFDVGVSILTDLTDIFKRAPIYEKLGGAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQIVWAA 93 (941)
T ss_pred cCCCCCCCHHHHHHhcCchhhHHHHHHhCCHHHHHHHhCcCcccCCCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHH
Confidence 456899999999988865 4678889999999999999999999999444459999999999999999999999999999
Q ss_pred HhhHHHHHHHHHHHHHHHhhhc-----ccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCceeEEEeC
Q 003740 171 LHDMTLMILAVCALVSLVVGIA-----TEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARN 245 (799)
Q Consensus 171 l~~~~~~il~i~a~is~~~~~~-----~~~~~~~~~d~~~i~~~illv~~~~~~~~~~~~~~~~~l~~~~~~~~v~V~R~ 245 (799)
|+++.+++|++++++++++++. .++....|++++.|+++++++++++++.+|+++++++++++..++..++|+||
T Consensus 94 f~~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRd 173 (941)
T TIGR01517 94 LSDQTLILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRG 173 (941)
T ss_pred HhCHHHHHHHHHHHHHHHHhhcccccccCccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEEC
Confidence 9999999999999999998753 22344589999999999999999999999999999999987666779999999
Q ss_pred CeEEEEecCCCCcccEEEecCCCeecccEEEEeeceeEEecccccCCCCccccCCC-CCEEEccceeeeceEEEEEEEEc
Q 003740 246 GFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNAL-NPFLLSGTKVQNGSCKMLVTTVG 324 (799)
Q Consensus 246 g~~~~i~~~~LvvGDiv~l~~Gd~vPaDg~ll~g~~l~vDeS~lTGEs~pv~k~~~-~~~v~sGt~v~~G~~~~~V~~vG 324 (799)
|++++|+++||||||+|.|++||+|||||++++|+++.||||+|||||.|+.|..+ ++++|+||.|.+|.++++|++||
T Consensus 174 G~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g~~l~VdES~LTGES~pv~K~~~~~n~v~~GT~v~~G~~~~iV~~tG 253 (941)
T TIGR01517 174 GQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGLSLEIDESSITGESDPIKKGAPKDSFLLSGTVVNEGSGRMLVTAVG 253 (941)
T ss_pred CEEEEEeHHHCCCCCEEEECCCCEecccEEEEEcCcEEEEecccCCCCCcccccCCCCceEEeCCeEEeeEEEEEEEEeC
Confidence 99999999999999999999999999999999997789999999999999999854 46899999999999999999999
Q ss_pred ccchhHHHHHhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcchHHHHHHHHHH
Q 003740 325 MRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIA 404 (799)
Q Consensus 325 ~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 404 (799)
.+|++|+|++++.+++ +++|+|++++++++++.++++.+++++|+++++.++......+.. ........+...|..+
T Consensus 254 ~~T~~gki~~~~~~~~-~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~a 330 (941)
T TIGR01517 254 VNSFGGKLMMELRAEG-EDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGR--DTEEDAQTFLDHFIIA 330 (941)
T ss_pred CCcHHHHHHHhhccCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccc--ccchhhHHHHHHHHHH
Confidence 9999999999998765 568999999999999999999999888888765544322111100 0001112577889999
Q ss_pred HHHHHHHhCCchhHHHHHHHHHHHHHHhhhhhhhcccchhhccCCceeEeecCCCccccCceEEEEEEEcCeeeeecCCC
Q 003740 405 VTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSK 484 (799)
Q Consensus 405 v~ilvva~P~~Lplav~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~ 484 (799)
+++++++||||||+++|++++.++++|+++|++||+++++|+||++|+||||||||||+|+|+|.+++..+..+..+.
T Consensus 331 l~llv~~iP~~Lp~~vti~l~~~~~~mak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~-- 408 (941)
T TIGR01517 331 VTIVVVAVPEGLPLAVTIALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRD-- 408 (941)
T ss_pred HHHHHhhCCCchHHHHHHHHHHHHHHHHhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCc--
Confidence 999999999999999999999999999999999999999999999999999999999999999999997665443221
Q ss_pred CCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCce
Q 003740 485 GTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQ 564 (799)
Q Consensus 485 ~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~g~~~~~~~~~~~i~~~~~F~s~~k~ 564 (799)
.....++...+++..++++|+......++.+..+..|||+|.|+++++...+.+....+..+++++.+||+|++|+
T Consensus 409 ----~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~ 484 (941)
T TIGR01517 409 ----VLRNVPKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSERKF 484 (941)
T ss_pred ----ccccCCHHHHHHHHHHHHhCCCCccccCCCCccccCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccCCCCCe
Confidence 1111234455667677777765543322233446789999999999998888877777777888999999999999
Q ss_pred EEEEEEeCCCcEEEEEcCchHHHHHhcccccccCCeEeeCCHHHHHHHHHHHHHHHHhccceeeEEEEEcCCCCCCCCCC
Q 003740 565 MGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPI 644 (799)
Q Consensus 565 ~~vv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~~~~~~~~ 644 (799)
|+++++.+++.+++++||+||.+++.|+.++..+|...++++ .++.+.+.+++|+++|+|++++|||+++.+.......
T Consensus 485 msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~-~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~~~ 563 (941)
T TIGR01517 485 MSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEATPISD-DKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDY 563 (941)
T ss_pred EEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcccCcH-HHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccc
Confidence 999999877779999999999999999988777888888887 7788999999999999999999999986543222234
Q ss_pred CCCcceeeeeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhc
Q 003740 645 PTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLI 724 (799)
Q Consensus 645 ~~~~~~~lg~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~ 724 (799)
.+.+++|+|+++|+||+||+++++|+.|+++||+|+|+||||+.||.+||++|||.+++..+++|+++++++++++.+.+
T Consensus 564 ~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i 643 (941)
T TIGR01517 564 PNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPIL 643 (941)
T ss_pred cccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHh
Confidence 47899999999999999999999999999999999999999999999999999999888899999999999999999999
Q ss_pred CCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC-----ChHhHHHhh
Q 003740 725 PKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF-----NFSSRKTYI 798 (799)
Q Consensus 725 ~~~~v~ar~sP~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi-----nf~si~~~i 798 (799)
+++.||||++|+||+++|+.||++ |++|+|||||+||+||||+||||||||++|||+||++||+ ||++|+++|
T Consensus 644 ~~~~Vfar~sPe~K~~iV~~lq~~-g~vVam~GDGvNDapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i 721 (941)
T TIGR01517 644 PKLRVLARSSPLDKQLLVLMLKDM-GEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAV 721 (941)
T ss_pred ccCeEEEECCHHHHHHHHHHHHHC-CCEEEEECCCCchHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHH
Confidence 999999999999999999999999 9999999999999999999999999999999999999999 999999987
No 4
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=1.1e-114 Score=1054.38 Aligned_cols=648 Identities=29% Similarity=0.411 Sum_probs=555.8
Q ss_pred CCHHHHHHHhCCCccCCCCccHHHHHHHHHhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhhcccCCCC
Q 003740 119 GGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPK 198 (799)
Q Consensus 119 ~~v~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~g~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~~ 198 (799)
..++.+++.|+++...||+.++ +.+|++.||+|+++.++.+++|+.++++|+++++++|+++++++++++
T Consensus 10 ~~~~~v~~~l~t~~~~GLs~~e--a~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~~-------- 79 (1053)
T TIGR01523 10 DIADEAAEFIGTSIPEGLTHDE--AQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMH-------- 79 (1053)
T ss_pred CCHHHHHHHhCcCcccCCCHHH--HHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHh--------
Confidence 4678899999999989999977 999999999999999999999999999999999999999999999875
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCceeEEEeCCeEEEEecCCCCcccEEEecCCCeecccEEEEe
Q 003740 199 GAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVS 278 (799)
Q Consensus 199 ~~~d~~~i~~~illv~~~~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~i~~~~LvvGDiv~l~~Gd~vPaDg~ll~ 278 (799)
.|++++.|++.+++..+++.+++|+.++..++|.+.. +.+++|+|||++++|+++||||||||.|++||+|||||+|++
T Consensus 80 ~~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l~-~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rLi~ 158 (1053)
T TIGR01523 80 DWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLA-SPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLRLIE 158 (1053)
T ss_pred hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccC-CCceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEEEEE
Confidence 6899999999999999999999999999999999754 558999999999999999999999999999999999999999
Q ss_pred eceeEEecccccCCCCccccCCC--------------CCEEEccceeeeceEEEEEEEEcccchhHHHHHhhcCCCC---
Q 003740 279 GFSVLINESSLTGESEPVNVNAL--------------NPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGD--- 341 (799)
Q Consensus 279 g~~l~vDeS~lTGEs~pv~k~~~--------------~~~v~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~--- 341 (799)
+++|.||||+|||||.||.|... .+++|+||.|.+|.++++|++||.+|++|+|.+++.+...
T Consensus 159 ~~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~~~~~~~~ 238 (1053)
T TIGR01523 159 TKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGLFQ 238 (1053)
T ss_pred eCceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHhhhhhccc
Confidence 99999999999999999999631 3579999999999999999999999999999998864321
Q ss_pred --------------------------------CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccc
Q 003740 342 --------------------------------DETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTW 389 (799)
Q Consensus 342 --------------------------------~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~ 389 (799)
.+||||+++++++.++..+++++++++|++....
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~~-------------- 304 (1053)
T TIGR01523 239 RPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKFD-------------- 304 (1053)
T ss_pred cccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--------------
Confidence 2499999999999999888888777766542110
Q ss_pred CCcchHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHhhhhhhhcccchhhccCCceeEeecCCCccccCceEEE
Q 003740 390 SGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVL 469 (799)
Q Consensus 390 ~~~~~~~~~~~~~~av~ilvva~P~~Lplav~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~ 469 (799)
.+...+..+++++|+++|+|||+.+++++++++++|+++|++||+++++|+||++|+||+|||||||+|+|+|.
T Consensus 305 ------~~~~~~~~av~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~ 378 (1053)
T TIGR01523 305 ------VDKEVAIYAICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIAR 378 (1053)
T ss_pred ------hhHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEE
Confidence 11345667899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcC-eeeeecCC--CCCCC------------------------C-------------CCCCChhHHHHHHHHHHhcC
Q 003740 470 KACICE-EIKEVDNS--KGTPA------------------------F-------------GSSIPASASKLLLQSIFNNT 509 (799)
Q Consensus 470 ~~~~~~-~~~~~~~~--~~~~~------------------------~-------------~~~~~~~~~~~l~~~i~~~~ 509 (799)
++|..+ ..+..+.. ...+. . ......+....+....++|+
T Consensus 379 ~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn 458 (1053)
T TIGR01523 379 QIWIPRFGTISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALAN 458 (1053)
T ss_pred EEEEcCCceEEecCCCCCCCCcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHhcc
Confidence 999864 22221110 00000 0 00000112232444555566
Q ss_pred CceEEec-CCCceEEcCCchHHHHHHHHHHcCCChH------HH-------------------hhhcceEEEecCCCCCc
Q 003740 510 GGEVVIG-EGNKTEILGTPTETAILEFGLLLGGDFQ------AE-------------------RQASKIVKVEPFNSVKK 563 (799)
Q Consensus 510 ~~~~~~~-~~~~~~~~g~p~e~All~~~~~~g~~~~------~~-------------------~~~~~i~~~~~F~s~~k 563 (799)
.+.+..+ +++.+...|+|+|.||+.++.+.|.+.. .. +..+++++.+||+|+||
T Consensus 459 ~a~~~~~~~~~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK 538 (1053)
T TIGR01523 459 IATVFKDDATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIK 538 (1053)
T ss_pred CCeeeccCCCCceeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCC
Confidence 5665432 2334466899999999999988876421 11 23467899999999999
Q ss_pred eEEEEEEeCCC-cEEEEEcCchHHHHHhcccccccCC-eEeeCCHHHHHHHHHHHHHHHHhccceeeEEEEEcCCCCCC-
Q 003740 564 QMGVVIELPEG-GFRVHCKGASEIILAACDKFLNSNG-EVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSA- 640 (799)
Q Consensus 564 ~~~vv~~~~~~-~~~~~~KGa~e~il~~c~~~~~~~g-~~~~l~~~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~~~~- 640 (799)
||+++++.+++ .+++|+|||||.|+++|+++...+| ...+++++.++.+.+.+++|+++|+||+++|||+++.+...
T Consensus 539 ~msvv~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~ 618 (1053)
T TIGR01523 539 RMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNND 618 (1053)
T ss_pred eEEEEEEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccc
Confidence 99999986544 4889999999999999998766554 56799999999999999999999999999999998653110
Q ss_pred --------CCCCCCCcceeeeeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC----------
Q 003740 641 --------DAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD---------- 702 (799)
Q Consensus 641 --------~~~~~~~~~~~lg~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~---------- 702 (799)
..+..|.|++|+|+++|+||+||+++++|+.|+++||+|+|+|||++.||.+||++|||.++
T Consensus 619 ~~~~~~~~~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~ 698 (1053)
T TIGR01523 619 DQLKNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIM 698 (1053)
T ss_pred hhhhccccchhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccc
Confidence 11345789999999999999999999999999999999999999999999999999999854
Q ss_pred CceeecchhhhccCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCCCHH
Q 003740 703 NGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEV 782 (799)
Q Consensus 703 ~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~gtev 782 (799)
...+++|++++.++++++.+...+..||||++|+||+++|+.||++ |++|+|||||+||+|||++||||||||++|+|+
T Consensus 699 ~~~vitG~~l~~l~~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~-g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~v 777 (1053)
T TIGR01523 699 DSMVMTGSQFDALSDEEVDDLKALCLVIARCAPQTKVKMIEALHRR-KAFCAMTGDGVNDSPSLKMANVGIAMGINGSDV 777 (1053)
T ss_pred cceeeehHHhhhcCHHHHHHHhhcCeEEEecCHHHHHHHHHHHHhc-CCeeEEeCCCcchHHHHHhCCccEecCCCccHH
Confidence 3479999999999999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred HHHhcCC-----ChHhHHHhh
Q 003740 783 ELECCCF-----NFSSRKTYI 798 (799)
Q Consensus 783 ak~aaDi-----nf~si~~~i 798 (799)
||++||+ ||++|+++|
T Consensus 778 ak~aADivl~dd~f~~I~~~i 798 (1053)
T TIGR01523 778 AKDASDIVLSDDNFASILNAI 798 (1053)
T ss_pred HHHhcCEEEecCCHHHHHHHH
Confidence 9999999 899999986
No 5
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.9e-114 Score=1043.09 Aligned_cols=637 Identities=37% Similarity=0.541 Sum_probs=562.7
Q ss_pred HHHHHhCCCccCCCCccHHHHHHHHHhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhhcccCCCCCcch
Q 003740 123 GIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHD 202 (799)
Q Consensus 123 ~l~~~l~~~~~~Gl~~~~~~~~~r~~~~g~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~~~~~d 202 (799)
.+...+.++...||+.++ +.+|+..||.|+++..+..++|..++.+|++++.++|+++++++++++.+..+. .+
T Consensus 32 ~~~~~~~~~~~~GLs~~e--~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~~~~~~~~----~~ 105 (917)
T COG0474 32 ELLLELFTSPTTGLSEEE--VKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVGDWVDAG----VD 105 (917)
T ss_pred hHHHhhcCCcccCCCHHH--HHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccC----cc
Confidence 566778888899999965 999999999999999999999999999999999999999999999988542110 45
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCceeEEEeCCeEEEEecCCCCcccEEEecCCCeecccEEEEeecee
Q 003740 203 GLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSV 282 (799)
Q Consensus 203 ~~~i~~~illv~~~~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~i~~~~LvvGDiv~l~~Gd~vPaDg~ll~g~~l 282 (799)
...|...+++..++..+++|+.++..+++.+.. +..++|+|||++++|+++||||||||.|++||+||||+++++++++
T Consensus 106 ~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~-~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~l 184 (917)
T COG0474 106 AIVILLVVVINALLGFVQEYRAEKALEALKKMS-SPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSDL 184 (917)
T ss_pred eeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCceEEEeCCcEEEecHHHCCCCcEEEECCCCccccceEEEEecCc
Confidence 556666777777788888888888888888755 5699999999999999999999999999999999999999999989
Q ss_pred EEecccccCCCCccccC-------------CCCCEEEccceeeeceEEEEEEEEcccchhHHHHHhhcCCCCCCChhHHH
Q 003740 283 LINESSLTGESEPVNVN-------------ALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVK 349 (799)
Q Consensus 283 ~vDeS~lTGEs~pv~k~-------------~~~~~v~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~ 349 (799)
.||||+|||||.|+.|. ..++++|+||.+.+|.+.++|++||.+|+.|++...+......+||+|++
T Consensus 185 ~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~~~~~~~t~l~~~ 264 (917)
T COG0474 185 EVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKEVKTPLQRK 264 (917)
T ss_pred eEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhccccccCCcHHHH
Confidence 99999999999999996 34678999999999999999999999999999999999886677999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcchHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHH
Q 003740 350 LNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMK 429 (799)
Q Consensus 350 l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvva~P~~Lplav~l~l~~~~~ 429 (799)
++++..++..+++++++++|++...+ . +. .+...|..++++++.++|+|||+.++++++.+..
T Consensus 265 l~~~~~~l~~~~l~~~~~~~~~~~~~---~----~~----------~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~ 327 (917)
T COG0474 265 LNKLGKFLLVLALVLGALVFVVGLFR---G----GN----------GLLESFLTALALAVAAVPEGLPAVVTIALALGAQ 327 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh---c----Cc----------cHHHHHHHHHHHHHhccccchHHHHHHHHHHHHH
Confidence 99999999999998888887765211 0 00 1567899999999999999999999999999999
Q ss_pred HHhhhhhhhcccchhhccCCceeEeecCCCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcC
Q 003740 430 KMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNT 509 (799)
Q Consensus 430 ~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~ 509 (799)
+|.+++++||+++++|+||++++||||||||||+|+|+|.+++..+...+.+ ......++... .+...+++|+
T Consensus 328 ~mak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~------~~~~~~~~~~~-~~l~~~~lc~ 400 (917)
T COG0474 328 RMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDID------DKDLKDSPALL-RFLLAAALCN 400 (917)
T ss_pred HHHhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCccccc------ccccccchHHH-HHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999985110000 00111112223 3345556666
Q ss_pred CceEEecCCCceEEcCCchHHHHHHHHHHcCC--ChHHHhhhcceEEEecCCCCCceEEEEEEeCCCcEEEEEcCchHHH
Q 003740 510 GGEVVIGEGNKTEILGTPTETAILEFGLLLGG--DFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEII 587 (799)
Q Consensus 510 ~~~~~~~~~~~~~~~g~p~e~All~~~~~~g~--~~~~~~~~~~i~~~~~F~s~~k~~~vv~~~~~~~~~~~~KGa~e~i 587 (799)
+.....+ + ++..|||+|.||++++.+.|. +....+..+++++.+||+|+||||+++++.+++++.+++|||||.|
T Consensus 401 ~~~~~~~-~--~~~~gdptE~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~i 477 (917)
T COG0474 401 SVTPEKN-G--WYQAGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVI 477 (917)
T ss_pred ccccccc-C--ceecCCccHHHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHH
Confidence 6555544 3 677999999999999999988 7778888889999999999999999999976677999999999999
Q ss_pred HHhcccccccCCeEeeCCHHHHHHHHHHHHHHHHhccceeeEEEEEcCCCCCCCC-CCCCCcceeeeeecccCCCcccHH
Q 003740 588 LAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADA-PIPTEGYTCIGIVGIKDPMRPGVK 666 (799)
Q Consensus 588 l~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~~~~~~-~~~~~~~~~lg~~~~~D~~R~~v~ 666 (799)
+++|+++ +...+++++.++.+++..++|+++|+|++++|||.++..+.... ...|.|++|+|+++|+||||+|++
T Consensus 478 l~~~~~~----~~~~~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g~~Dppr~~v~ 553 (917)
T COG0474 478 LERCKSI----GELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVK 553 (917)
T ss_pred HHHhccc----CcccccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccchhhhhhccceeehhhhccCCCCccHH
Confidence 9999987 77789999999999999999999999999999997765533211 467899999999999999999999
Q ss_pred HHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC--ceeecchhhhccCHHHHhhhcCCceEEEecCcccHHHHHHH
Q 003740 667 ESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN--GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKH 744 (799)
Q Consensus 667 ~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~lV~~ 744 (799)
++|+.|++|||+|+|+||||+.||++||++|||..+. ..+++|.++..++++++.+.+.++.||||+||+||.++|+.
T Consensus 554 ~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP~qK~~IV~~ 633 (917)
T COG0474 554 EAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSPEQKARIVEA 633 (917)
T ss_pred HHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCHHHHHHHHHH
Confidence 9999999999999999999999999999999998876 45999999999999999999999999999999999999999
Q ss_pred HHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC-----ChHhHHHhh
Q 003740 745 LRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF-----NFSSRKTYI 798 (799)
Q Consensus 745 Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi-----nf~si~~~i 798 (799)
||++ |++|||||||+|||||||+||||||||++|||+||+|||| ||++|+.++
T Consensus 634 lq~~-g~vVamtGDGvNDapALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av 691 (917)
T COG0474 634 LQKS-GHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAV 691 (917)
T ss_pred HHhC-CCEEEEeCCCchhHHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHH
Confidence 9999 9999999999999999999999999999999999999999 999999886
No 6
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=6.3e-112 Score=1018.02 Aligned_cols=615 Identities=25% Similarity=0.388 Sum_probs=539.3
Q ss_pred CHHHHHHHhCCCccCCCCccHHHHHHHHHhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhhcccCCCCC
Q 003740 120 GVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKG 199 (799)
Q Consensus 120 ~v~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~g~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~~~ 199 (799)
..+.+.+.|+++. .||++++ +.+|++.||+|+++.++++++|+.+|++|++++.++++++++++++++ .
T Consensus 53 ~~~~v~~~l~~~~-~GLs~~e--a~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~~--------~ 121 (902)
T PRK10517 53 PEEELWKTFDTHP-EGLNEAE--VESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYATE--------D 121 (902)
T ss_pred CHHHHHHHhCCCC-CCCCHHH--HHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc--------c
Confidence 5788888999987 6999877 999999999999999999999999999999999999999999998865 5
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCceeEEEeC------CeEEEEecCCCCcccEEEecCCCeeccc
Q 003740 200 AHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARN------GFRRKISIYDLLPGDIVHLCMGDQVPAD 273 (799)
Q Consensus 200 ~~d~~~i~~~illv~~~~~~~~~~~~~~~~~l~~~~~~~~v~V~R~------g~~~~i~~~~LvvGDiv~l~~Gd~vPaD 273 (799)
|++++.|++.+++..+++.+.+++.++..++|.+.. +.+++|+|| |++++|+++||||||+|.|++||+||||
T Consensus 122 ~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~-~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaD 200 (902)
T PRK10517 122 LFAAGVIALMVAISTLLNFIQEARSTKAADALKAMV-SNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPAD 200 (902)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeee
Confidence 788988888888888888888998888888888754 458999999 7899999999999999999999999999
Q ss_pred EEEEeeceeEEecccccCCCCccccCCCC------------CEEEccceeeeceEEEEEEEEcccchhHHHHHhhcCCCC
Q 003740 274 GLFVSGFSVLINESSLTGESEPVNVNALN------------PFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGD 341 (799)
Q Consensus 274 g~ll~g~~l~vDeS~lTGEs~pv~k~~~~------------~~v~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~ 341 (799)
|+|++|+++.||||+|||||.|+.|..++ +.+|+||.|.+|+++++|++||.+|++|+|.+++.+...
T Consensus 201 g~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~~v~~~~~ 280 (902)
T PRK10517 201 LRILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQDS 280 (902)
T ss_pred EEEEEcCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHHHHHHhhccCC
Confidence 99999988999999999999999997653 479999999999999999999999999999999999888
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcchHHHHHHHHHHHHHHHHHhCCchhHHHH
Q 003740 342 DETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVT 421 (799)
Q Consensus 342 ~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvva~P~~Lplav~ 421 (799)
+++|+|+.++++++++..+++++++++++++.+ . .+ ++...|.++++++|++|||+||+++|
T Consensus 281 ~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~---~----~~-----------~~~~~l~~alsv~V~~~Pe~LP~~vt 342 (902)
T PRK10517 281 EPNAFQQGISRVSWLLIRFMLVMAPVVLLINGY---T----KG-----------DWWEAALFALSVAVGLTPEMLPMIVT 342 (902)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHH---h----cC-----------CHHHHHHHHHHHHHHHcccHHHHHHH
Confidence 899999999999999998888777766655321 1 00 25567889999999999999999999
Q ss_pred HHHHHHHHHHhhhhhhhcccchhhccCCceeEeecCCCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHH
Q 003740 422 LSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLL 501 (799)
Q Consensus 422 l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 501 (799)
++++.++++|+|+|++||+++++|+||++|+||||||||||+|+|+|.+++.... . +..+++
T Consensus 343 ~~la~g~~~mak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~~~----------------~--~~~~ll 404 (902)
T PRK10517 343 STLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDISG----------------K--TSERVL 404 (902)
T ss_pred HHHHHHHHHHHhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecCCC----------------C--CHHHHH
Confidence 9999999999999999999999999999999999999999999999987642110 0 011222
Q ss_pred HHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeCCCcEEEEEc
Q 003740 502 LQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCK 581 (799)
Q Consensus 502 ~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~g~~~~~~~~~~~i~~~~~F~s~~k~~~vv~~~~~~~~~~~~K 581 (799)
...+.|+.. . ...+||+|.|++.++...+ .......++.+..+||+|.+|+|+++++..++.+.+++|
T Consensus 405 -~~a~l~~~~--~-------~~~~~p~d~All~~a~~~~--~~~~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~K 472 (902)
T PRK10517 405 -HSAWLNSHY--Q-------TGLKNLLDTAVLEGVDEES--ARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICK 472 (902)
T ss_pred -HHHHhcCCc--C-------CCCCCHHHHHHHHHHHhcc--hhhhhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEe
Confidence 223333321 1 1168999999999986543 123345677889999999999999998876677889999
Q ss_pred CchHHHHHhcccccccCCeEeeCCHHHHHHHHHHHHHHHHhccceeeEEEEEcCCCCCCCCCCCCCcceeeeeecccCCC
Q 003740 582 GASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPM 661 (799)
Q Consensus 582 Ga~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~~ 661 (799)
|+||.++++|+++. .+|...+++++.++.+.+..+.|+++|+|++++|||+++.+........|.|++|+|+++|+||+
T Consensus 473 Ga~e~il~~c~~~~-~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~ 551 (902)
T PRK10517 473 GALEEILNVCSQVR-HNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDPP 551 (902)
T ss_pred CchHHHHHhchhhh-cCCCeecCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCCccccccccccccCceeeehHhhhCcc
Confidence 99999999999875 45667899999999999999999999999999999988654321111236799999999999999
Q ss_pred cccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHHHH
Q 003740 662 RPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTL 741 (799)
Q Consensus 662 R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~l 741 (799)
||+++++|++|+++||+|+|+||||+.||.+||++|||. ++.+++|++++.++++++.+.++++.||||++|+||.++
T Consensus 552 R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~--~~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K~~I 629 (902)
T PRK10517 552 KETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLD--AGEVLIGSDIETLSDDELANLAERTTLFARLTPMHKERI 629 (902)
T ss_pred hhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC--ccCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHHHHH
Confidence 999999999999999999999999999999999999995 357999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC-----ChHhHHHhhC
Q 003740 742 VKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF-----NFSSRKTYIL 799 (799)
Q Consensus 742 V~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi-----nf~si~~~i~ 799 (799)
|+.||++ |++|+|||||+||+||||+|||||||| +|||+||++||| ||++|+++|+
T Consensus 630 V~~Lq~~-G~vVam~GDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~~~~I~~ai~ 690 (902)
T PRK10517 630 VTLLKRE-GHVVGFMGDGINDAPALRAADIGISVD-GAVDIAREAADIILLEKSLMVLEEGVI 690 (902)
T ss_pred HHHHHHC-CCEEEEECCCcchHHHHHhCCEEEEeC-CcCHHHHHhCCEEEecCChHHHHHHHH
Confidence 9999999 999999999999999999999999999 999999999999 9999999873
No 7
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=3.9e-111 Score=1026.77 Aligned_cols=658 Identities=29% Similarity=0.422 Sum_probs=559.9
Q ss_pred hCCHHHHHHHhCCCccCCCCccHHHHHHHHHhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhhccc---
Q 003740 118 HGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATE--- 194 (799)
Q Consensus 118 ~~~v~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~g~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~--- 194 (799)
-..++++++.|+++...||++++ +.+|+++||+|+++.++.+++|+.++++|++++.+++++++++++++....+
T Consensus 19 ~~~~~~~~~~l~t~~~~GLs~~e--~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~~~~ 96 (997)
T TIGR01106 19 KLSLDELERKYGTDLSKGLSAAR--AAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQASTE 96 (997)
T ss_pred hCCHHHHHHHhCcCcccCCCHHH--HHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccC
Confidence 35688999999999999999977 9999999999999998999999999999999999999999999876543221
Q ss_pred --CCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCceeEEEeCCeEEEEecCCCCcccEEEecCCCeecc
Q 003740 195 --GWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPA 272 (799)
Q Consensus 195 --~~~~~~~d~~~i~~~illv~~~~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~i~~~~LvvGDiv~l~~Gd~vPa 272 (799)
.....|++++.+++.+++..++..+.+++.++..+++.+ ..+..++|+|||++++|+++||||||+|.|++||+|||
T Consensus 97 ~~~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~-~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~IPa 175 (997)
T TIGR01106 97 EEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKN-MVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPA 175 (997)
T ss_pred CCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCEEee
Confidence 112468888866666666555566666666666666655 34568999999999999999999999999999999999
Q ss_pred cEEEEeeceeEEecccccCCCCccccCCCC---------CEEEccceeeeceEEEEEEEEcccchhHHHHHhhcCCCCCC
Q 003740 273 DGLFVSGFSVLINESSLTGESEPVNVNALN---------PFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDE 343 (799)
Q Consensus 273 Dg~ll~g~~l~vDeS~lTGEs~pv~k~~~~---------~~v~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~ 343 (799)
||++++|+++.||||+|||||.|+.|..++ +++|+||.|.+|.+.++|++||.+|++|++.+++.+...++
T Consensus 176 D~~il~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~ 255 (997)
T TIGR01106 176 DLRIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLASGLENGK 255 (997)
T ss_pred eEEEEEccCcEEEccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhhhcccCC
Confidence 999999988999999999999999997543 47999999999999999999999999999999998888888
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcchHHHHHHHHHHHHHHHHHhCCchhHHHHHH
Q 003740 344 TPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLS 423 (799)
Q Consensus 344 tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvva~P~~Lplav~l~ 423 (799)
+|+|+++++++..+..+++++++++|+++++. + + .+...+.+++++++++|||+||++++++
T Consensus 256 ~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~--~--------~~~~~~~~~i~v~v~~iP~~L~~~v~i~ 317 (997)
T TIGR01106 256 TPIAIEIEHFIHIITGVAVFLGVSFFILSLIL--------G--Y--------TWLEAVIFLIGIIVANVPEGLLATVTVC 317 (997)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------c--C--------CHHHHHHHHHHHHhhcCCccchHHHHHH
Confidence 99999999999999998888887776654321 0 0 2456778889999999999999999999
Q ss_pred HHHHHHHHhhhhhhhcccchhhccCCceeEeecCCCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHH
Q 003740 424 LAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQ 503 (799)
Q Consensus 424 l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 503 (799)
+++++++|.++|++||+++++|+||++|+||||||||||+|+|+|.++|+.+..+..+.................+.+..
T Consensus 318 l~~~~~~m~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 397 (997)
T TIGR01106 318 LTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSR 397 (997)
T ss_pred HHHHHHHHHHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999877665332110000000111123334555
Q ss_pred HHHhcCCceEEecCCC----ceEEcCCchHHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeC---CCcE
Q 003740 504 SIFNNTGGEVVIGEGN----KTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELP---EGGF 576 (799)
Q Consensus 504 ~i~~~~~~~~~~~~~~----~~~~~g~p~e~All~~~~~~g~~~~~~~~~~~i~~~~~F~s~~k~~~vv~~~~---~~~~ 576 (799)
.+++|+++.+..+..+ +....|+|+|.||++++...+.+....+..+++++.+||+|+||+|+++++.. ++.+
T Consensus 398 ~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~ 477 (997)
T TIGR01106 398 IAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRH 477 (997)
T ss_pred HHHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEeccCCCCceE
Confidence 6677766665433222 23567999999999999877666777788899999999999999999887643 2468
Q ss_pred EEEEcCchHHHHHhcccccccCCeEeeCCHHHHHHHHHHHHHHHHhccceeeEEEEEcCCCCCC--------CCCCCCCc
Q 003740 577 RVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSA--------DAPIPTEG 648 (799)
Q Consensus 577 ~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~~~~--------~~~~~~~~ 648 (799)
++++|||||.|++.|++++ .+|+..+++++.++.+.+.+++|+++|+||+++|||+++.+... +.+..|.|
T Consensus 478 ~~~~KGApe~Il~~c~~~~-~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~ 556 (997)
T TIGR01106 478 LLVMKGAPERILERCSSIL-IHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDN 556 (997)
T ss_pred EEEEeCChHHHHHHhhHHh-cCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhhhccccC
Confidence 8999999999999999876 57888999999999999999999999999999999998653110 01223789
Q ss_pred ceeeeeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC------------------------c
Q 003740 649 YTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN------------------------G 704 (799)
Q Consensus 649 ~~~lg~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~------------------------~ 704 (799)
++|+|+++|+||+||+++++|++|+++||+|+|+|||+..||.++|+++||.+++ .
T Consensus 557 L~flGli~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 636 (997)
T TIGR01106 557 LCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKA 636 (997)
T ss_pred cEEEEEEeccCCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccc
Confidence 9999999999999999999999999999999999999999999999999997543 2
Q ss_pred eeecchhhhccCHHHHhhhcCCce--EEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCCCHH
Q 003740 705 IAIEGPEFREKSDEELSKLIPKIQ--VMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEV 782 (799)
Q Consensus 705 ~~~~g~~~~~~~~~~~~~~~~~~~--v~ar~sP~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~gtev 782 (799)
.+++|++++.++++++.+.+++.. ||||++|+||+++|+.||+. |++|+|||||+||+|||++||||||||++|+|+
T Consensus 637 ~vi~G~~l~~l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~-g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~v 715 (997)
T TIGR01106 637 CVVHGSDLKDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQ-GAIVAVTGDGVNDSPALKKADIGVAMGIAGSDV 715 (997)
T ss_pred eEEEhHHhhhCCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHC-CCEEEEECCCcccHHHHhhCCcceecCCcccHH
Confidence 699999999999999999998764 99999999999999999999 999999999999999999999999999999999
Q ss_pred HHHhcCC-----ChHhHHHhh
Q 003740 783 ELECCCF-----NFSSRKTYI 798 (799)
Q Consensus 783 ak~aaDi-----nf~si~~~i 798 (799)
||++||+ ||++|+++|
T Consensus 716 ak~aADivL~dd~f~~Iv~ai 736 (997)
T TIGR01106 716 SKQAADMILLDDNFASIVTGV 736 (997)
T ss_pred HHHhhceEEecCCHHHHHHHH
Confidence 9999999 899999986
No 8
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=5.6e-111 Score=1011.54 Aligned_cols=622 Identities=26% Similarity=0.390 Sum_probs=540.7
Q ss_pred CCHHHHHHHhCCCccCCCCccHHHHHHHHHhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhhccc---C
Q 003740 119 GGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATE---G 195 (799)
Q Consensus 119 ~~v~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~g~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~---~ 195 (799)
...+.++..|+++. .||+.++ +.+|+++||+|+++.++.+++|+.++++|++++.++|+++++++++++.+.. +
T Consensus 30 ~~~~~v~~~l~~~~-~GLs~~e--a~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~ 106 (903)
T PRK15122 30 NSLEETLANLNTHR-QGLTEED--AAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRRG 106 (903)
T ss_pred CCHHHHHHHhCCCC-CCCCHHH--HHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 35777888899984 7999877 9999999999999999999999999999999999999999999999876431 2
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCceeEEEeC------CeEEEEecCCCCcccEEEecCCCe
Q 003740 196 WPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARN------GFRRKISIYDLLPGDIVHLCMGDQ 269 (799)
Q Consensus 196 ~~~~~~d~~~i~~~illv~~~~~~~~~~~~~~~~~l~~~~~~~~v~V~R~------g~~~~i~~~~LvvGDiv~l~~Gd~ 269 (799)
....|++++.|++.+++..++..+.+|+.++..++|.+.. +..++|+|| |++++|+++||||||+|.|++||+
T Consensus 107 ~~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~-~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~ 185 (903)
T PRK15122 107 EETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMV-RTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDM 185 (903)
T ss_pred ccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCE
Confidence 2246899999988888998999999999999999988754 458999999 479999999999999999999999
Q ss_pred ecccEEEEeeceeEEecccccCCCCccccCC--C--------------------CCEEEccceeeeceEEEEEEEEcccc
Q 003740 270 VPADGLFVSGFSVLINESSLTGESEPVNVNA--L--------------------NPFLLSGTKVQNGSCKMLVTTVGMRT 327 (799)
Q Consensus 270 vPaDg~ll~g~~l~vDeS~lTGEs~pv~k~~--~--------------------~~~v~sGt~v~~G~~~~~V~~vG~~T 327 (799)
|||||++++|+++.||||+|||||.|+.|.. + ++.+|+||.|.+|+++++|++||.+|
T Consensus 186 IPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~T 265 (903)
T PRK15122 186 IPADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRT 265 (903)
T ss_pred EeeeEEEEEcCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEecccc
Confidence 9999999999989999999999999999974 1 25799999999999999999999999
Q ss_pred hhHHHHHhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcchHHHHHHHHHHHHH
Q 003740 328 QWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTI 407 (799)
Q Consensus 328 ~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~i 407 (799)
++|+|.+++.+ ...++|+|++++++++++..+++.++.+++++.. +. .+ ++...|.+++++
T Consensus 266 ~~gkI~~~v~~-~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~---~~----~~-----------~~~~~l~~aisl 326 (903)
T PRK15122 266 YFGSLAKSIVG-TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLING---FT----KG-----------DWLEALLFALAV 326 (903)
T ss_pred HhhHHHHHhcC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhh---hc----cC-----------CHHHHHHHHHHH
Confidence 99999999987 5567999999999999988877766655444321 11 00 356778899999
Q ss_pred HHHHhCCchhHHHHHHHHHHHHHHhhhhhhhcccchhhccCCceeEeecCCCccccCceEEEEEEEcCeeeeecCCCCCC
Q 003740 408 VVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTP 487 (799)
Q Consensus 408 lvva~P~~Lplav~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~ 487 (799)
++++||||||+++|++++.++++|+++|++||+++++|+||++|+||||||||||+|+|+|.+++..+..
T Consensus 327 ~V~~~Pe~Lp~~vt~~La~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~~---------- 396 (903)
T PRK15122 327 AVGLTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSGR---------- 396 (903)
T ss_pred HHHHccchHHHHHHHHHHHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcCCCC----------
Confidence 9999999999999999999999999999999999999999999999999999999999999987643211
Q ss_pred CCCCCCChhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEE
Q 003740 488 AFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGV 567 (799)
Q Consensus 488 ~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~g~~~~~~~~~~~i~~~~~F~s~~k~~~v 567 (799)
.+++. +..+ ++|+.. . ..++||+|.|+++++.+.+.. ..+..++.++.+||++.+|+|++
T Consensus 397 -----~~~~~---l~~a-~l~s~~--~-------~~~~~p~e~All~~a~~~~~~--~~~~~~~~~~~~pF~s~~k~ms~ 456 (903)
T PRK15122 397 -----KDERV---LQLA-WLNSFH--Q-------SGMKNLMDQAVVAFAEGNPEI--VKPAGYRKVDELPFDFVRRRLSV 456 (903)
T ss_pred -----ChHHH---HHHH-HHhCCC--C-------CCCCChHHHHHHHHHHHcCch--hhhhcCceEEEeeeCCCcCEEEE
Confidence 01122 2222 223211 1 127899999999999876543 23446778899999999999999
Q ss_pred EEEeCCCcEEEEEcCchHHHHHhcccccccCCeEeeCCHHHHHHHHHHHHHHHHhccceeeEEEEEcCCCCCC--CCCCC
Q 003740 568 VIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSA--DAPIP 645 (799)
Q Consensus 568 v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~~~~--~~~~~ 645 (799)
+++..++++.+++||+||.+++.|+++. .+|...+++++.++.+.+.++.|+++|+|++++|||+++.++.. .....
T Consensus 457 v~~~~~~~~~~~~KGa~e~il~~c~~~~-~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~~~ 535 (903)
T PRK15122 457 VVEDAQGQHLLICKGAVEEMLAVATHVR-DGDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRAQYSTAD 535 (903)
T ss_pred EEEcCCCcEEEEECCcHHHHHHhchhhh-cCCCeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccCcccccccccccc
Confidence 9887667788999999999999999775 46777899999999999999999999999999999988654211 11224
Q ss_pred CCcceeeeeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcC
Q 003740 646 TEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIP 725 (799)
Q Consensus 646 ~~~~~~lg~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~ 725 (799)
+.|++|+|+++|+||+|||++++|++|+++||+|+|+||||+.||.+||++|||.. +.+++|++++.++++++.+.++
T Consensus 536 e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~--~~vi~G~el~~~~~~el~~~v~ 613 (903)
T PRK15122 536 ERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP--GEPLLGTEIEAMDDAALAREVE 613 (903)
T ss_pred ccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC--CCccchHhhhhCCHHHHHHHhh
Confidence 67899999999999999999999999999999999999999999999999999953 4699999999999999999999
Q ss_pred CceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC-----ChHhHHHhh
Q 003740 726 KIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF-----NFSSRKTYI 798 (799)
Q Consensus 726 ~~~v~ar~sP~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi-----nf~si~~~i 798 (799)
+..||||++|+||+++|+.||++ |++|||||||+|||||||+|||||||| +|||+||++||| ||++|++++
T Consensus 614 ~~~VfAr~sPe~K~~iV~~Lq~~-G~vVamtGDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~f~~Iv~ai 689 (903)
T PRK15122 614 ERTVFAKLTPLQKSRVLKALQAN-GHTVGFLGDGINDAPALRDADVGISVD-SGADIAKESADIILLEKSLMVLEEGV 689 (903)
T ss_pred hCCEEEEeCHHHHHHHHHHHHhC-CCEEEEECCCchhHHHHHhCCEEEEeC-cccHHHHHhcCEEEecCChHHHHHHH
Confidence 99999999999999999999999 999999999999999999999999999 999999999999 999999987
No 9
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=9.7e-111 Score=1008.81 Aligned_cols=615 Identities=27% Similarity=0.373 Sum_probs=539.0
Q ss_pred CCHHHHHHHhCCCccCCCCccHHHHHHHHHhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhhcccCCCC
Q 003740 119 GGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPK 198 (799)
Q Consensus 119 ~~v~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~g~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~~ 198 (799)
..+++++..|+++. .||++++ +.+|++.||+|+++.++.+++|+.++++|++++.++++++++++++++
T Consensus 18 ~~~~~~~~~l~~~~-~GLs~~e--v~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~~-------- 86 (867)
T TIGR01524 18 MGKETLLRKLGVHE-TGLTNVE--VTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLTD-------- 86 (867)
T ss_pred CCHHHHHHHhCCCC-CCCCHHH--HHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHh--------
Confidence 46888999999986 7999877 999999999999999988999999999999999999999999998774
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCceeEEEe------CCeEEEEecCCCCcccEEEecCCCeecc
Q 003740 199 GAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVAR------NGFRRKISIYDLLPGDIVHLCMGDQVPA 272 (799)
Q Consensus 199 ~~~d~~~i~~~illv~~~~~~~~~~~~~~~~~l~~~~~~~~v~V~R------~g~~~~i~~~~LvvGDiv~l~~Gd~vPa 272 (799)
.|++++.|++.+++..++..+.+++.++....|.+.. +..++|+| ||++++|+++||||||+|.|++||+|||
T Consensus 87 ~~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~-~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPa 165 (867)
T TIGR01524 87 DLEATVIIALMVLASGLLGFIQESRAERAAYALKNMV-KNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPA 165 (867)
T ss_pred hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhc-cCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEcc
Confidence 5788988888888888888888988888888887744 45899999 9999999999999999999999999999
Q ss_pred cEEEEeeceeEEecccccCCCCccccCCCC------------CEEEccceeeeceEEEEEEEEcccchhHHHHHhhcCCC
Q 003740 273 DGLFVSGFSVLINESSLTGESEPVNVNALN------------PFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGG 340 (799)
Q Consensus 273 Dg~ll~g~~l~vDeS~lTGEs~pv~k~~~~------------~~v~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~ 340 (799)
||++++|+++.||||+|||||.|+.|..++ +++|+||.|.+|.++++|++||.+|++|+|.+++.+ .
T Consensus 166 Dg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~~v~~-~ 244 (867)
T TIGR01524 166 DARVISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATE-R 244 (867)
T ss_pred cEEEEecCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHHHhhC-C
Confidence 999999988999999999999999997653 479999999999999999999999999999999988 6
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcchHHHHHHHHHHHHHHHHHhCCchhHHH
Q 003740 341 DDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420 (799)
Q Consensus 341 ~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvva~P~~Lplav 420 (799)
..++|+|++++++++++.++++++++++|+++.+ . .+ ++...|.+++++++++||||||+++
T Consensus 245 ~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~---~----~~-----------~~~~~~~~al~l~v~~iP~~Lp~~v 306 (867)
T TIGR01524 245 RGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGL---M----KG-----------DWLEAFLFALAVAVGLTPEMLPMIV 306 (867)
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHheehHHH---h----cC-----------CHHHHHHHHHHHHHHhCcchHHHHH
Confidence 6679999999999999999888888776655421 0 00 2457788999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhhhcccchhhccCCceeEeecCCCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHH
Q 003740 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKL 500 (799)
Q Consensus 421 ~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (799)
|++++.++++|+++|++||+++++|+||++|+||||||||||+|+|+|.+++..... ...++
T Consensus 307 t~~la~g~~~mak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~~~------------------~~~~~ 368 (867)
T TIGR01524 307 SSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSSGE------------------TSERV 368 (867)
T ss_pred HHHHHHHHHHHHhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCCCC------------------CHHHH
Confidence 999999999999999999999999999999999999999999999999987532110 01122
Q ss_pred HHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeCCCcEEEEE
Q 003740 501 LLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHC 580 (799)
Q Consensus 501 l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~g~~~~~~~~~~~i~~~~~F~s~~k~~~vv~~~~~~~~~~~~ 580 (799)
+.. .++|+.. . ..++||+|+|+++++.... ....+..++.++.+||+|++|+|+++++.+++.+++++
T Consensus 369 l~~-a~l~~~~--~-------~~~~~p~~~Al~~~~~~~~--~~~~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~ 436 (867)
T TIGR01524 369 LKM-AWLNSYF--Q-------TGWKNVLDHAVLAKLDESA--ARQTASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLIC 436 (867)
T ss_pred HHH-HHHhCCC--C-------CCCCChHHHHHHHHHHhhc--hhhHhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEE
Confidence 222 2333221 1 1257999999999986532 23345567888999999999999999876555678999
Q ss_pred cCchHHHHHhcccccccCCeEeeCCHHHHHHHHHHHHHHHHhccceeeEEEEEcCCCCCCCCCCCCCcceeeeeecccCC
Q 003740 581 KGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660 (799)
Q Consensus 581 KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~ 660 (799)
||+||.+++.|+++. .+|...+++++.++.+.+.++.|+++|+|++++|||+++.++.......+.+++|+|+++|+||
T Consensus 437 KGa~e~il~~c~~~~-~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp 515 (867)
T TIGR01524 437 KGAVEEMLTVCTHKR-FGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEADFTKTDEEQLIIEGFLGFLDP 515 (867)
T ss_pred eCcHHHHHHhchhhh-cCCceecCCHHHHHHHHHHHHHHHhcCCEEEEEEEeccCcccccccccccCCcEEEEEEEeeCC
Confidence 999999999999774 4677789999988999999999999999999999998865432111123678999999999999
Q ss_pred CcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHHH
Q 003740 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHT 740 (799)
Q Consensus 661 ~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~ 740 (799)
+|||++++|++|+++||+|+|+||||+.||.+||+++||.. +.+++|.++++++++++.+.++++.||||++|+||++
T Consensus 516 ~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~--~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~~ 593 (867)
T TIGR01524 516 PKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA--NDFLLGADIEELSDEELARELRKYHIFARLTPMQKSR 593 (867)
T ss_pred CchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC--CCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHHH
Confidence 99999999999999999999999999999999999999963 4689999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC-----ChHhHHHhhC
Q 003740 741 LVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF-----NFSSRKTYIL 799 (799)
Q Consensus 741 lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi-----nf~si~~~i~ 799 (799)
+|+.||++ |++|+|||||+||+|||++|||||||| +|||+||++||| ||++|+++|+
T Consensus 594 iV~~lq~~-G~vVam~GDGvNDapALk~AdVGIAmg-~gtdvAk~aADiVLldd~~~~I~~ai~ 655 (867)
T TIGR01524 594 IIGLLKKA-GHTVGFLGDGINDAPALRKADVGISVD-TAADIAKEASDIILLEKSLMVLEEGVI 655 (867)
T ss_pred HHHHHHhC-CCEEEEECCCcccHHHHHhCCEEEEeC-CccHHHHHhCCEEEecCChHHHHHHHH
Confidence 99999999 999999999999999999999999999 999999999999 9999999873
No 10
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=2.1e-109 Score=1003.36 Aligned_cols=633 Identities=33% Similarity=0.512 Sum_probs=552.9
Q ss_pred CCHHHHHHHhCCCccCCCC-ccHHHHHHHHHhcCCCccCCCCCccHHHHHHHHH-hhHHHHHHHHHHHHHHHhhhcccCC
Q 003740 119 GGVEGIAEKLSTSITDGIS-TSEHLLNRRKEIYGINKFTESPARGFWVYVWEAL-HDMTLMILAVCALVSLVVGIATEGW 196 (799)
Q Consensus 119 ~~v~~l~~~l~~~~~~Gl~-~~~~~~~~r~~~~g~N~~~~~~~~~f~~~~~~~l-~~~~~~il~i~a~is~~~~~~~~~~ 196 (799)
..++++++.|+++...||+ .++ +.+|++.||+|+++.++.+++|+.++++| +++++++++++++++++++
T Consensus 7 ~~~~~v~~~l~t~~~~GLs~~~e--v~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~g------ 78 (884)
T TIGR01522 7 LSVEETCSKLQTDLQNGLNSSQE--ASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFMG------ 78 (884)
T ss_pred CCHHHHHHHhCcCcccCCCcHHH--HHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHHc------
Confidence 4689999999999999999 555 99999999999999999999999999999 9999999999999999876
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCceeEEEeCCeEEEEecCCCCcccEEEecCCCeecccEEE
Q 003740 197 PKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLF 276 (799)
Q Consensus 197 ~~~~~d~~~i~~~illv~~~~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~i~~~~LvvGDiv~l~~Gd~vPaDg~l 276 (799)
.|++++.|+++++++++++.+.+|+.++..++|.+. .+.+++|+|||++++|+++||||||+|.|++||+|||||++
T Consensus 79 --~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l-~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~i 155 (884)
T TIGR01522 79 --NIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKL-VPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRI 155 (884)
T ss_pred --chhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEEE
Confidence 578998888888888899999999999988888874 45689999999999999999999999999999999999999
Q ss_pred EeeceeEEecccccCCCCccccCCCC-------------CEEEccceeeeceEEEEEEEEcccchhHHHHHhhcCCCCCC
Q 003740 277 VSGFSVLINESSLTGESEPVNVNALN-------------PFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDE 343 (799)
Q Consensus 277 l~g~~l~vDeS~lTGEs~pv~k~~~~-------------~~v~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~ 343 (799)
++|+++.||||+|||||.|+.|..++ +++|+||.|.+|.++++|++||.+|++|+|.+++++....+
T Consensus 156 i~g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~~k 235 (884)
T TIGR01522 156 VEAVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKPK 235 (884)
T ss_pred EEcCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHhccCCCCC
Confidence 99987899999999999999997643 58999999999999999999999999999999999988889
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcchHHHHHHHHHHHHHHHHHhCCchhHHHHHH
Q 003740 344 TPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLS 423 (799)
Q Consensus 344 tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvva~P~~Lplav~l~ 423 (799)
+|+|+.+++++.++++++++++++++++. ++. +. .+...+..++++++++||||||+++|++
T Consensus 236 t~lq~~l~~l~~~~~~~~~~~~~~~~~~~---~~~-----~~----------~~~~~~~~~v~llv~aiP~~Lp~~vt~~ 297 (884)
T TIGR01522 236 TPLQKSMDLLGKQLSLVSFGVIGVICLVG---WFQ-----GK----------DWLEMFTISVSLAVAAIPEGLPIIVTVT 297 (884)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHh-----cC----------CHHHHHHHHHHHHHHHccchHHHHHHHH
Confidence 99999999999999887766554444332 111 10 2567888999999999999999999999
Q ss_pred HHHHHHHHhhhhhhhcccchhhccCCceeEeecCCCccccCceEEEEEEEcCeeeee-cCCCCC---------CCCCCCC
Q 003740 424 LAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV-DNSKGT---------PAFGSSI 493 (799)
Q Consensus 424 l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~-~~~~~~---------~~~~~~~ 493 (799)
+++++++|+++|++||+++++|+||++|+||||||||||+|+|+|.+++..+..+.. +..... .......
T Consensus 298 l~~~~~r~ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (884)
T TIGR01522 298 LALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFY 377 (884)
T ss_pred HHHHHHHHhhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCccccccccccccc
Confidence 999999999999999999999999999999999999999999999999976543210 000000 0000111
Q ss_pred ChhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeC-
Q 003740 494 PASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELP- 572 (799)
Q Consensus 494 ~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~g~~~~~~~~~~~i~~~~~F~s~~k~~~vv~~~~- 572 (799)
++...+++.. .++|+++.+... ..+..|||+|+|+++++...|.+ ..+..++.++.+||+|.+|+|+++++..
T Consensus 378 ~~~~~~~l~~-~~l~~~~~~~~~---~~~~~g~p~e~All~~~~~~~~~--~~~~~~~~~~~~pF~s~~k~m~v~~~~~~ 451 (884)
T TIGR01522 378 TVAVSRILEA-GNLCNNAKFRNE---ADTLLGNPTDVALIELLMKFGLD--DLRETYIRVAEVPFSSERKWMAVKCVHRQ 451 (884)
T ss_pred CHHHHHHHHH-HhhhCCCeecCC---CCCcCCChHHHHHHHHHHHcCcH--hHHhhCcEEeEeCCCCCCCeEEEEEEEcC
Confidence 2233344433 344444443322 12346899999999999877653 4455678899999999999999988753
Q ss_pred CCcEEEEEcCchHHHHHhcccccccCCeEeeCCHHHHHHHHHHHHHHHHhccceeeEEEEEcCCCCCCCCCCCCCcceee
Q 003740 573 EGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCI 652 (799)
Q Consensus 573 ~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~~~~~~~~~~~~~~~l 652 (799)
++++++++||+||.|+..|++++..+|...+++++.++.+.+.++.|+++|+|++++||++++ .+++|+
T Consensus 452 ~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~~-----------~~l~~l 520 (884)
T TIGR01522 452 DRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPEK-----------GQLTFL 520 (884)
T ss_pred CCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcCC-----------CCeEEE
Confidence 457889999999999999999988788888999999999999999999999999999998752 579999
Q ss_pred eeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEe
Q 003740 653 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMAR 732 (799)
Q Consensus 653 g~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar 732 (799)
|+++|+||+|||++++|+.|+++||+++|+|||++.||.++|++|||......+++|+++++++++++.+.+++..||||
T Consensus 521 Gli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar 600 (884)
T TIGR01522 521 GLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFAR 600 (884)
T ss_pred EEEeccCcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEE
Confidence 99999999999999999999999999999999999999999999999887778999999999999999999999999999
Q ss_pred cCcccHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC-----ChHhHHHhh
Q 003740 733 SSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF-----NFSSRKTYI 798 (799)
Q Consensus 733 ~sP~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi-----nf~si~~~i 798 (799)
++|+||..+|+.||++ |++|+|||||+||+|||++||||||||.+|+|+||++||+ ||++|++++
T Consensus 601 ~~P~~K~~iv~~lq~~-g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i 670 (884)
T TIGR01522 601 ASPEHKMKIVKALQKR-GDVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAI 670 (884)
T ss_pred CCHHHHHHHHHHHHHC-CCEEEEECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHH
Confidence 9999999999999999 9999999999999999999999999998899999999999 899999876
No 11
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=9.4e-107 Score=962.70 Aligned_cols=577 Identities=27% Similarity=0.411 Sum_probs=504.6
Q ss_pred CCCccHHHHHHHHHhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHH
Q 003740 135 GISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVV 214 (799)
Q Consensus 135 Gl~~~~~~~~~r~~~~g~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~~~~~d~~~i~~~illv~ 214 (799)
||+.++ +.+|+++||+|+++. +.+++|+.++++|++++.++++++++++++++ .|++++.|++.+++..
T Consensus 1 GLs~~e--a~~r~~~~G~N~~~~-~~~~~~~~~~~~~~~~~~~lL~~aa~~s~~~~--------~~~~~~~i~~~~~i~~ 69 (755)
T TIGR01647 1 GLTSAE--AKKRLAKYGPNELPE-KKVSPLLKFLGFFWNPLSWVMEAAAIIAIALE--------NWVDFVIILGLLLLNA 69 (755)
T ss_pred CcCHHH--HHHHHHhcCCCCCCC-CCCCHHHHHHHHHhchHHHHHHHHHHHHHhhc--------chhhhhhhhhhhHHHH
Confidence 788776 999999999999987 45677899999999999999999999999876 5888888888888888
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcCceeEEEeCCeEEEEecCCCCcccEEEecCCCeecccEEEEeeceeEEecccccCCCC
Q 003740 215 FVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESE 294 (799)
Q Consensus 215 ~~~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~i~~~~LvvGDiv~l~~Gd~vPaDg~ll~g~~l~vDeS~lTGEs~ 294 (799)
.+..+.+++.++..++|.+. .+.+++|+|||++++|+++||+|||+|.|++||+|||||++++|+++.||||+|||||.
T Consensus 70 ~i~~~qe~~a~~~~~~L~~~-~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~~~VDeS~LTGES~ 148 (755)
T TIGR01647 70 TIGFIEENKAGNAVEALKQS-LAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESL 148 (755)
T ss_pred HHHHHHHHHHHHHHHHHHhh-CCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCceEEEcccccCCcc
Confidence 88888888888888888764 45689999999999999999999999999999999999999999878999999999999
Q ss_pred ccccCCCCCEEEccceeeeceEEEEEEEEcccchhHHHHHhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003740 295 PVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQ 374 (799)
Q Consensus 295 pv~k~~~~~~v~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~ 374 (799)
|+.|..++ .+|+||.|.+|+++++|++||.+|++|+|.+++.+.+..++|+|+.+++++.++.++.+++++++|+++..
T Consensus 149 PV~K~~~~-~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~ 227 (755)
T TIGR01647 149 PVTKKTGD-IAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFF 227 (755)
T ss_pred ceEeccCC-eeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998876 59999999999999999999999999999999999888889999999999999999888888777765532
Q ss_pred HHhhhhccCCCccccCCcchHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHhhhhhhhcccchhhccCCceeEe
Q 003740 375 GLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSIC 454 (799)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvva~P~~Lplav~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~ 454 (799)
.+ + . ++...+.+++++++++|||+||+++|++++.++++|+|+|++||+++++|+||++|+||
T Consensus 228 ~~-------~-------~---~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~~i~ 290 (755)
T TIGR01647 228 GR-------G-------E---SFREGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILC 290 (755)
T ss_pred Hc-------C-------C---CHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCcEEE
Confidence 10 0 0 35678889999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHH
Q 003740 455 SDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILE 534 (799)
Q Consensus 455 ~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~ 534 (799)
||||||||+|+|+|.+++..+.. .+++ +++..+..++. +.++||+|+|+++
T Consensus 291 ~DKTGTLT~~~~~v~~~~~~~~~---------------~~~~--~~l~~a~~~~~------------~~~~~pi~~Ai~~ 341 (755)
T TIGR01647 291 SDKTGTLTLNKLSIDEILPFFNG---------------FDKD--DVLLYAALASR------------EEDQDAIDTAVLG 341 (755)
T ss_pred ecCCCccccCceEEEEEEecCCC---------------CCHH--HHHHHHHHhCC------------CCCCChHHHHHHH
Confidence 99999999999999998864321 0111 22322322221 1268999999999
Q ss_pred HHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeCC-CcEEEEEcCchHHHHHhcccccccCCeEeeCCHHHHHHHH
Q 003740 535 FGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPE-GGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLN 613 (799)
Q Consensus 535 ~~~~~g~~~~~~~~~~~i~~~~~F~s~~k~~~vv~~~~~-~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~ 613 (799)
++.+.+ ..+..+++++.+||++.+|+|+++++.++ ++...++||+||.+++.|++. ++.++++.
T Consensus 342 ~~~~~~----~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~-----------~~~~~~~~ 406 (755)
T TIGR01647 342 SAKDLK----EARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNK-----------KEIEEKVE 406 (755)
T ss_pred HHHHhH----HHHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCc-----------HHHHHHHH
Confidence 886532 23456778899999999999999887654 556678999999999999742 34556788
Q ss_pred HHHHHHHHhccceeeEEEEEcCCCCCCCCCCCCCcceeeeeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHH
Q 003740 614 ETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAI 693 (799)
Q Consensus 614 ~~~~~~a~~g~r~l~~a~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~ai 693 (799)
+.+++|+.+|+|++++||++ .+.+++|+|+++|+||+|||++++|++|+++||+|+|+||||+.||++|
T Consensus 407 ~~~~~~~~~G~rvl~vA~~~-----------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~I 475 (755)
T TIGR01647 407 EKVDELASRGYRALGVARTD-----------EEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKET 475 (755)
T ss_pred HHHHHHHhCCCEEEEEEEEc-----------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHH
Confidence 88999999999999999983 1368999999999999999999999999999999999999999999999
Q ss_pred HHHcCCccC---CceeecchhhhccCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCC
Q 003740 694 ARECGILTD---NGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEAD 770 (799)
Q Consensus 694 A~~~GI~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~Ad 770 (799)
|++|||... ...+.+|.+.+.++++++.+.++++.||||++|+||+++|+.||++ |++|+|||||+||+|||++||
T Consensus 476 A~~lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~-G~~VamvGDGvNDapAL~~Ad 554 (755)
T TIGR01647 476 ARRLGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEVFPEHKYEIVEILQKR-GHLVGMTGDGVNDAPALKKAD 554 (755)
T ss_pred HHHcCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHHHhc-CCEEEEEcCCcccHHHHHhCC
Confidence 999999753 2234455666788999999999999999999999999999999999 999999999999999999999
Q ss_pred eeeecCCCCCHHHHHhcCC-----ChHhHHHhh
Q 003740 771 IGLAMGIAGTEVELECCCF-----NFSSRKTYI 798 (799)
Q Consensus 771 VGiamgi~gtevak~aaDi-----nf~si~~~i 798 (799)
|||||| +|||+||++||| ||++|+++|
T Consensus 555 VGIAm~-~gtdvAkeaADivLl~d~l~~I~~ai 586 (755)
T TIGR01647 555 VGIAVA-GATDAARSAADIVLTEPGLSVIVDAI 586 (755)
T ss_pred eeEEec-CCcHHHHHhCCEEEEcCChHHHHHHH
Confidence 999999 999999999999 999999987
No 12
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=1.8e-103 Score=953.63 Aligned_cols=620 Identities=33% Similarity=0.468 Sum_probs=529.2
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHhhhcccCC--CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCceeEEEe
Q 003740 167 VWEALHDMTLMILAVCALVSLVVGIATEGW--PKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVAR 244 (799)
Q Consensus 167 ~~~~l~~~~~~il~i~a~is~~~~~~~~~~--~~~~~d~~~i~~~illv~~~~~~~~~~~~~~~~~l~~~~~~~~v~V~R 244 (799)
++++|+++.+++|++++++|+++++..++. ...|++++.|++.+++..+++.+.+++.++..++|.+ ..+.+++|+|
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~-~~~~~~~ViR 79 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKE-YESEHAKVLR 79 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCCceEEEE
Confidence 478999999999999999999998765332 2479999999999999999999999999999999887 4566899999
Q ss_pred CCeEEEEecCCCCcccEEEecCCCeecccEEEEeeceeEEecccccCCCCccccCCC------------CCEEEccceee
Q 003740 245 NGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNAL------------NPFLLSGTKVQ 312 (799)
Q Consensus 245 ~g~~~~i~~~~LvvGDiv~l~~Gd~vPaDg~ll~g~~l~vDeS~lTGEs~pv~k~~~------------~~~v~sGt~v~ 312 (799)
||++++|+++||||||+|.|++||+|||||++++|+++.||||+|||||.|+.|.++ ++++|+||.+.
T Consensus 80 dg~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~ 159 (917)
T TIGR01116 80 DGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVV 159 (917)
T ss_pred CCEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEEe
Confidence 999999999999999999999999999999999998899999999999999999653 26899999999
Q ss_pred eceEEEEEEEEcccchhHHHHHhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCc
Q 003740 313 NGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGD 392 (799)
Q Consensus 313 ~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~ 392 (799)
+|.++++|++||.+|++|+|.+++.+...++||+|+++++++.++.++.+++++++|++++.++... ..+ ..
T Consensus 160 ~G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~--~~~------~~ 231 (917)
T TIGR01116 160 AGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDP--ALG------GG 231 (917)
T ss_pred cceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--ccc------ch
Confidence 9999999999999999999999999988889999999999999999888888777776554322110 000 01
Q ss_pred chHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHhhhhhhhcccchhhccCCceeEeecCCCccccCceEEEEEE
Q 003740 393 DALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKAC 472 (799)
Q Consensus 393 ~~~~~~~~~~~av~ilvva~P~~Lplav~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~ 472 (799)
....+..++..++++++++|||+||+++++++++++++|+++|++||+++++|+||++|+||||||||||+|+|+|.+++
T Consensus 232 ~~~~~~~~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~ 311 (917)
T TIGR01116 232 WIQGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVV 311 (917)
T ss_pred hHHHHHHHHHHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEE
Confidence 11245667778899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCee------eeecCCCCCCCC---C-----CCCChhHHHHHHHHHHhcCCceEEecC-CCceEEcCCchHHHHHHHHH
Q 003740 473 ICEEI------KEVDNSKGTPAF---G-----SSIPASASKLLLQSIFNNTGGEVVIGE-GNKTEILGTPTETAILEFGL 537 (799)
Q Consensus 473 ~~~~~------~~~~~~~~~~~~---~-----~~~~~~~~~~l~~~i~~~~~~~~~~~~-~~~~~~~g~p~e~All~~~~ 537 (799)
..+.. +...+....+.. . ..........+....++|+++.+..++ ++..+..|+|+|.||++++.
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~ 391 (917)
T TIGR01116 312 ALDPSSSSLNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVE 391 (917)
T ss_pred ecCCcccccceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHH
Confidence 86532 111111100000 0 000122344455666777777665432 22344579999999999998
Q ss_pred HcCCChHH----------------HhhhcceEEEecCCCCCceEEEEEEeCCCcEEEEEcCchHHHHHhcccccccCCeE
Q 003740 538 LLGGDFQA----------------ERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEV 601 (799)
Q Consensus 538 ~~g~~~~~----------------~~~~~~i~~~~~F~s~~k~~~vv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~ 601 (799)
+.|.+... .+..+++++.+||+|+||||+++++.+ +++.+|+|||||.|++.|++++..+|..
T Consensus 392 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~~-~~~~~~~KGApe~il~~c~~~~~~~g~~ 470 (917)
T TIGR01116 392 KMGLPATKNGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKPS-TGNKLFVKGAPEGVLERCTHILNGDGRA 470 (917)
T ss_pred HcCCCchhcccccccccccchhHHHHhhcceeeecccChhhCeEEEEEeeC-CcEEEEEcCChHHHHHhccceecCCCCe
Confidence 88765432 345677999999999999999999864 5688999999999999999988877888
Q ss_pred eeCCHHHHHHHHHHHHHHHH-hccceeeEEEEEcCCCCC-------CCCCCCCCcceeeeeecccCCCcccHHHHHHHHH
Q 003740 602 VPLNEAAVNHLNETIEKFAS-EALRTLCLACMEIGNEFS-------ADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICR 673 (799)
Q Consensus 602 ~~l~~~~~~~~~~~~~~~a~-~g~r~l~~a~~~~~~~~~-------~~~~~~~~~~~~lg~~~~~D~~R~~v~~aI~~l~ 673 (799)
.|++++.++++.+.+++|++ +|+||+++|||+++.+.. ...+..|.+++|+|+++|+||+||+++++|+.|+
T Consensus 471 ~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~ 550 (917)
T TIGR01116 471 VPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCR 550 (917)
T ss_pred eeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHH
Confidence 99999999999999999999 999999999999865311 1113457899999999999999999999999999
Q ss_pred hCCCEEEEEcCCCHHHHHHHHHHcCCccCCc----eeecchhhhccCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhC
Q 003740 674 SAGITVRMVTGDNINTAKAIARECGILTDNG----IAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTL 749 (799)
Q Consensus 674 ~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~lV~~Lq~~~ 749 (799)
++||+++|+|||+..||.++|+++||..++. .+++|+++..++++++.+..++..||||++|+||.++|+.||+.
T Consensus 551 ~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~- 629 (917)
T TIGR01116 551 TAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQ- 629 (917)
T ss_pred HCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHhc-
Confidence 9999999999999999999999999986543 57899999999999999999999999999999999999999988
Q ss_pred CCEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC-----ChHhHHHhh
Q 003740 750 GEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF-----NFSSRKTYI 798 (799)
Q Consensus 750 G~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi-----nf~si~~~i 798 (799)
|++|+|+|||+||+|||++|||||||| +|+|+||++||+ ||++|++++
T Consensus 630 g~~va~iGDG~ND~~alk~AdVGia~g-~g~~~ak~aAD~vl~dd~f~~i~~~i 682 (917)
T TIGR01116 630 GEIVAMTGDGVNDAPALKKADIGIAMG-SGTEVAKEASDMVLADDNFATIVAAV 682 (917)
T ss_pred CCeEEEecCCcchHHHHHhCCeeEECC-CCcHHHHHhcCeEEccCCHHHHHHHH
Confidence 999999999999999999999999999 999999999999 699999876
No 13
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=5.2e-101 Score=943.84 Aligned_cols=608 Identities=24% Similarity=0.350 Sum_probs=486.8
Q ss_pred cCCCCccHHHHHHHHHhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHH
Q 003740 133 TDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILL 212 (799)
Q Consensus 133 ~~Gl~~~~~~~~~r~~~~g~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~~~~~d~~~i~~~ill 212 (799)
..||+.++ +.+|++.||.|.++.+ .++||+.+++++.+|+.+++++++++++.. +.|++++.+++.+++
T Consensus 137 ~~GLs~~e--~~~r~~~yG~N~i~~~-~~s~~~ll~~~~~~p~~i~~i~~~~l~~~~--------~~~~~~~~i~~i~~~ 205 (1054)
T TIGR01657 137 SNGLTTGD--IAQRKAKYGKNEIEIP-VPSFLELLKEEVLHPFYVFQVFSVILWLLD--------EYYYYSLCIVFMSST 205 (1054)
T ss_pred ccCCCHHH--HHHHHHhcCCCeeecC-CCCHHHHHHHHHhchHHHHHHHHHHHHHhh--------hhHHHHHHHHHHHHH
Confidence 46998876 9999999999999875 589999999999999988888776665432 257888877776666
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhcCceeEEEeCCeEEEEecCCCCcccEEEec--CCCeecccEEEEeeceeEEeccccc
Q 003740 213 VVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLC--MGDQVPADGLFVSGFSVLINESSLT 290 (799)
Q Consensus 213 v~~~~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~i~~~~LvvGDiv~l~--~Gd~vPaDg~ll~g~~l~vDeS~lT 290 (799)
..+++...+++..++.+++. ..+..++|+|||++++|+++||||||+|.|+ +||+|||||+|++|+ +.||||+||
T Consensus 206 ~~~~~~~~~~k~~~~L~~~~--~~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g~-~~VdES~LT 282 (1054)
T TIGR01657 206 SISLSVYQIRKQMQRLRDMV--HKPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGS-CIVNESMLT 282 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHhh--cCCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeCc-EEEeccccc
Confidence 55555544444444333332 2356899999999999999999999999999 999999999999995 799999999
Q ss_pred CCCCccccCCC-----------------CCEEEccceeee-------ceEEEEEEEEcccchhHHHHHhhcCCCCCCChh
Q 003740 291 GESEPVNVNAL-----------------NPFLLSGTKVQN-------GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPL 346 (799)
Q Consensus 291 GEs~pv~k~~~-----------------~~~v~sGt~v~~-------G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tpl 346 (799)
|||.|+.|.+. .+++|+||.|.+ |.+.++|++||.+|..|++.+++......++|+
T Consensus 283 GES~Pv~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~ 362 (1054)
T TIGR01657 283 GESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKF 362 (1054)
T ss_pred CCccceecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCCCCCCCch
Confidence 99999999641 247999999985 789999999999999999999998888888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcchHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHH
Q 003740 347 QVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAF 426 (799)
Q Consensus 347 q~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvva~P~~Lplav~l~l~~ 426 (799)
++.+.++...+. +++++.++++++..+. .+. ++...+..++++++++|||+||+++++++++
T Consensus 363 ~~~~~~~~~~l~----~~a~i~~i~~~~~~~~----~~~----------~~~~~~l~~l~iiv~~vP~~LP~~~ti~l~~ 424 (1054)
T TIGR01657 363 YKDSFKFILFLA----VLALIGFIYTIIELIK----DGR----------PLGKIILRSLDIITIVVPPALPAELSIGINN 424 (1054)
T ss_pred HHHHHHHHHHHH----HHHHHHHHHHHHHHHH----cCC----------cHHHHHHHHHHHHHhhcCchHHHHHHHHHHH
Confidence 888766655443 3333333332222111 111 3567888999999999999999999999999
Q ss_pred HHHHHhhhhhhhcccchhhccCCceeEeecCCCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHH
Q 003740 427 AMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIF 506 (799)
Q Consensus 427 ~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~ 506 (799)
++++|+++|++||++.++|++|++|+||||||||||+|+|+|.+++..+........ .... .......+...++
T Consensus 425 ~~~rL~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~--~~~~----~~~~~~~~~~~~a 498 (1054)
T TIGR01657 425 SLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKI--VTED----SSLKPSITHKALA 498 (1054)
T ss_pred HHHHHHHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCccccccc--cccc----cccCchHHHHHHH
Confidence 999999999999999999999999999999999999999999999875432110000 0000 0011223345566
Q ss_pred hcCCceEEecCCCceEEcCCchHHHHHHHHHHc-CC--C--hHH----------HhhhcceEEEecCCCCCceEEEEEEe
Q 003740 507 NNTGGEVVIGEGNKTEILGTPTETAILEFGLLL-GG--D--FQA----------ERQASKIVKVEPFNSVKKQMGVVIEL 571 (799)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~-g~--~--~~~----------~~~~~~i~~~~~F~s~~k~~~vv~~~ 571 (799)
.|++..... + +..|||+|.|+++++... .. + ... ....+++++.+||+|++|||+++++.
T Consensus 499 ~C~~~~~~~---~--~~~Gdp~E~al~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~ 573 (1054)
T TIGR01657 499 TCHSLTKLE---G--KLVGDPLDKKMFEATGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVST 573 (1054)
T ss_pred hCCeeEEEC---C--EEecCHHHHHHHHhCCCEEECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEE
Confidence 676554321 2 568999999999986311 10 0 000 02457889999999999999999987
Q ss_pred CC-CcEEEEEcCchHHHHHhcccccccCCeEeeCCHHHHHHHHHHHHHHHHhccceeeEEEEEcCCCC-----CCCCCCC
Q 003740 572 PE-GGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEF-----SADAPIP 645 (799)
Q Consensus 572 ~~-~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~~-----~~~~~~~ 645 (799)
++ +.+++++|||||.|+++|+.. ..++.+.+.++.|+.+|+||+++|||+++... ..+++..
T Consensus 574 ~~~~~~~~~~KGApE~Il~~c~~~------------~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~ 641 (1054)
T TIGR01657 574 NDERSPDAFVKGAPETIQSLCSPE------------TVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAV 641 (1054)
T ss_pred cCCCeEEEEEECCHHHHHHHcCCc------------CCChhHHHHHHHHHhcCCEEEEEEEeecCccchhhhhhccHHHH
Confidence 55 457899999999999999841 12356788899999999999999999987421 1123456
Q ss_pred CCcceeeeeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC----------------------
Q 003740 646 TEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN---------------------- 703 (799)
Q Consensus 646 ~~~~~~lg~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~---------------------- 703 (799)
|.|++|+|+++|+||+||+++++|+.|+++||+|+|+||||+.||.+||++|||.+++
T Consensus 642 E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~ 721 (1054)
T TIGR01657 642 ESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFE 721 (1054)
T ss_pred hcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEE
Confidence 8899999999999999999999999999999999999999999999999999997543
Q ss_pred -------------------------------ceeecchhhhc---cCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhC
Q 003740 704 -------------------------------GIAIEGPEFRE---KSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTL 749 (799)
Q Consensus 704 -------------------------------~~~~~g~~~~~---~~~~~~~~~~~~~~v~ar~sP~dK~~lV~~Lq~~~ 749 (799)
..+++|++++. +.++++.+.++++.||||++|+||.++|+.||+.
T Consensus 722 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~- 800 (1054)
T TIGR01657 722 VIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKL- 800 (1054)
T ss_pred ecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhC-
Confidence 14778888765 4667889999999999999999999999999999
Q ss_pred CCEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC-----ChHhHHHhhC
Q 003740 750 GEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF-----NFSSRKTYIL 799 (799)
Q Consensus 750 G~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi-----nf~si~~~i~ 799 (799)
|++|+|||||+||+||||+|||||||| + +|++ .|||+ ||++|+++|+
T Consensus 801 g~~V~m~GDG~ND~~ALK~AdVGIam~-~-~das-~AA~f~l~~~~~~~I~~~I~ 852 (1054)
T TIGR01657 801 DYTVGMCGDGANDCGALKQADVGISLS-E-AEAS-VAAPFTSKLASISCVPNVIR 852 (1054)
T ss_pred CCeEEEEeCChHHHHHHHhcCcceeec-c-ccce-eecccccCCCcHHHHHHHHH
Confidence 999999999999999999999999998 4 3655 89999 9999999874
No 14
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.2e-101 Score=850.76 Aligned_cols=655 Identities=32% Similarity=0.450 Sum_probs=560.6
Q ss_pred hhCCHHHHHHHhCCCccCCCCccHHHHHHHHHhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhhcccC-
Q 003740 117 VHGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEG- 195 (799)
Q Consensus 117 ~~~~v~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~g~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~- 195 (799)
+...++.|+++|.++..+||+... +.+++.+-|+|.+++|+..|-|..+.+++++...++++++|+++++.......
T Consensus 40 H~~~~~eL~~r~~t~~~~Glt~~~--A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~~~a~l~~~~y~~~~s~ 117 (1019)
T KOG0203|consen 40 HKLSVDELCERYGTSVSQGLTSQE--AAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLWIGAILCFVAYGIQAST 117 (1019)
T ss_pred ccCCHHHHHHHhcCChhhcccHHH--HHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhccc
Confidence 456799999999999999999987 89999999999999999999999999999999999999999888764442211
Q ss_pred ----CCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---hhcCceeEEEeCCeEEEEecCCCCcccEEEecCCC
Q 003740 196 ----WPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDR---EKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGD 268 (799)
Q Consensus 196 ----~~~~~~d~~~i~~~illv~~~~~~~~~~~~~~~~~l~~---~~~~~~v~V~R~g~~~~i~~~~LvvGDiv~l~~Gd 268 (799)
.....|-+. .+..+++++.+-.|.|+.+-.+... .+.|..++|+|||+.+.+...||||||+|.++-||
T Consensus 118 ~~~~~~~nly~gi----iL~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k~~i~~eelVvGD~v~vk~Gd 193 (1019)
T KOG0203|consen 118 EDDPSDDNLYLGI----VLAAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDGEKMTINAEELVVGDLVEVKGGD 193 (1019)
T ss_pred CCCCCCcceEEEE----EEEEEEEEEecCCCccchhhHHHHHHHhccchhhheeeecceeEEechhhcccccceeeccCC
Confidence 112333332 2223334444555666555444333 35577999999999999999999999999999999
Q ss_pred eecccEEEEeeceeEEecccccCCCCccccCC---------CCCEEEccceeeeceEEEEEEEEcccchhHHHHHhhcCC
Q 003740 269 QVPADGLFVSGFSVLINESSLTGESEPVNVNA---------LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEG 339 (799)
Q Consensus 269 ~vPaDg~ll~g~~l~vDeS~lTGEs~pv~k~~---------~~~~v~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~ 339 (799)
+||||.+++++..+++|+|+|||||+|.+.++ ..++-|.+|.+++|.++++|.+||.+|.+|+|..+...-
T Consensus 194 rVPADiRiis~~g~~vdnsslTGesEP~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~givi~tGd~Tv~G~ia~l~~~~ 273 (1019)
T KOG0203|consen 194 RVPADIRIISATGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTGRGIVIATGDRTVMGRIASLASGL 273 (1019)
T ss_pred cccceeEEEEecceeEeccccccccCCccCCccccccCchhheeeeeeeeEEecceEEEEEEecCCceEEeehhhhhccC
Confidence 99999999999999999999999999999852 245689999999999999999999999999999998888
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcchHHHHHHHHHHHHHHHHHhCCchhHH
Q 003740 340 GDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLA 419 (799)
Q Consensus 340 ~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvva~P~~Lpla 419 (799)
...++|++..++++..++..+++++++..|++.++. +. .++.++.+.+.++|..+|+|||..
T Consensus 274 ~~~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~--------gy----------~~l~avv~~i~iivAnvPeGL~~t 335 (1019)
T KOG0203|consen 274 EDGKTPIAKEIEHFIHIITGVAIFLGISFFILALIL--------GY----------EWLRAVVFLIGIIVANVPEGLLAT 335 (1019)
T ss_pred CCCCCcchhhhhchHHHHHHHHHHHHHHHHHHHHhh--------cc----------hhHHHhhhhheeEEecCcCCccce
Confidence 888999999999999999998888888777554321 10 466777778899999999999999
Q ss_pred HHHHHHHHHHHHhhhhhhhcccchhhccCCceeEeecCCCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHH
Q 003740 420 VTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASK 499 (799)
Q Consensus 420 v~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (799)
+|..++...++|++++++||++.+.|++|+.++||+|||||||+|+|+|.++|.++.....+...+.........+....
T Consensus 336 vTv~LtltakrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~~~~ 415 (1019)
T KOG0203|consen 336 VTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSSATFI 415 (1019)
T ss_pred ehhhHHHHHHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccCchHH
Confidence 99999999999999999999999999999999999999999999999999999998876544322222222222334555
Q ss_pred HHHHHHHhcCCceEEecCCC----ceEEcCCchHHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeCC--
Q 003740 500 LLLQSIFNNTGGEVVIGEGN----KTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPE-- 573 (799)
Q Consensus 500 ~l~~~i~~~~~~~~~~~~~~----~~~~~g~p~e~All~~~~~~g~~~~~~~~~~~i~~~~~F~s~~k~~~vv~~~~~-- 573 (799)
.+...+.+|+.+.+..++.+ +....|++.|.||++|+...-.+....|..++.+...||||.+|+.-.+.+..+
T Consensus 416 ~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~ 495 (1019)
T KOG0203|consen 416 ALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVMELRERNPKVAEIPFNSTNKYQLSIHETEDPS 495 (1019)
T ss_pred HHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccccceEEEEEecCCCC
Confidence 66678888888888876654 446689999999999998776677889999999999999999999888877554
Q ss_pred -CcEEEEEcCchHHHHHhcccccccCCeEeeCCHHHHHHHHHHHHHHHHhccceeeEEEEEcCCCC--------CCCCCC
Q 003740 574 -GGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEF--------SADAPI 644 (799)
Q Consensus 574 -~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~~--------~~~~~~ 644 (799)
..+.+.+|||||.++++|+.++ .+|+..|++++.++.++.....+...|.|+++|+++.++++. ....+.
T Consensus 496 ~~~~~l~mKGape~il~~CSTi~-i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~ 574 (1019)
T KOG0203|consen 496 DPRFLLVMKGAPERILDRCSTIL-INGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTDDVNF 574 (1019)
T ss_pred CccceeeecCChHHHHhhcccee-ecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecCCCCC
Confidence 4577889999999999999876 478889999999999999999999999999999999887541 223356
Q ss_pred CCCcceeeeeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCc--------------------
Q 003740 645 PTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG-------------------- 704 (799)
Q Consensus 645 ~~~~~~~lg~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~-------------------- 704 (799)
+..++.|+|++.+-||||+.+++||..||.|||+|+|+|||++.||+|||+..||..+++
T Consensus 575 p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~ 654 (1019)
T KOG0203|consen 575 PTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSR 654 (1019)
T ss_pred cchhccccchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCcc
Confidence 778999999999999999999999999999999999999999999999999999886432
Q ss_pred ----eeecchhhhccCHHHHhhhcCCc--eEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCC
Q 003740 705 ----IAIEGPEFREKSDEELSKLIPKI--QVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIA 778 (799)
Q Consensus 705 ----~~~~g~~~~~~~~~~~~~~~~~~--~v~ar~sP~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~ 778 (799)
.|++|.++.+++++++++++.+. .||||.||+||+.||+.+|++ |.+|++||||+||+||||.||||||||++
T Consensus 655 ~a~a~VihG~eL~~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~-GaiVaVTGDGVNDsPALKKADIGVAMGia 733 (1019)
T KOG0203|consen 655 DAKAAVIHGSELPDMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQ-GAIVAVTGDGVNDSPALKKADIGVAMGIA 733 (1019)
T ss_pred ccceEEEecccccccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhc-CcEEEEeCCCcCCChhhcccccceeeccc
Confidence 78999999999999999998432 399999999999999999999 99999999999999999999999999999
Q ss_pred CCHHHHHhcCC-----ChHhHHHh
Q 003740 779 GTEVELECCCF-----NFSSRKTY 797 (799)
Q Consensus 779 gtevak~aaDi-----nf~si~~~ 797 (799)
|+|++|+|||+ ||+|||+-
T Consensus 734 GSDvsKqAADmILLDDNFASIVtG 757 (1019)
T KOG0203|consen 734 GSDVSKQAADMILLDDNFASIVTG 757 (1019)
T ss_pred cchHHHhhcceEEecCcchhheee
Confidence 99999999999 99999964
No 15
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=4.4e-94 Score=827.20 Aligned_cols=516 Identities=25% Similarity=0.332 Sum_probs=424.3
Q ss_pred HHHhhHHHHHHHHHHHHHHHhhhccc---C---CCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCceeEE
Q 003740 169 EALHDMTLMILAVCALVSLVVGIATE---G---WPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQV 242 (799)
Q Consensus 169 ~~l~~~~~~il~i~a~is~~~~~~~~---~---~~~~~~d~~~i~~~illv~~~~~~~~~~~~~~~~~l~~~~~~~~v~V 242 (799)
.+|+++.++++++++++++++++... + +..+|..++.+++.+++..++++..+++.+++++.|.+..++..++|
T Consensus 29 ~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~v 108 (679)
T PRK01122 29 VQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFARK 108 (679)
T ss_pred HHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 46789999999999999999886432 1 11234444444555555556666777777788888887655557999
Q ss_pred EeCCe-EEEEecCCCCcccEEEecCCCeecccEEEEeeceeEEecccccCCCCccccCCCC--CEEEccceeeeceEEEE
Q 003740 243 ARNGF-RRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALN--PFLLSGTKVQNGSCKML 319 (799)
Q Consensus 243 ~R~g~-~~~i~~~~LvvGDiv~l~~Gd~vPaDg~ll~g~~l~vDeS~lTGEs~pv~k~~~~--~~v~sGt~v~~G~~~~~ 319 (799)
+|||+ +++|++++|++||+|.|++||+|||||++++|. ..||||+|||||.|+.|..++ +.+|+||.|.+|+++++
T Consensus 109 ir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG~-a~VDESaLTGES~PV~K~~G~~~~~V~aGT~v~~G~~~i~ 187 (679)
T PRK01122 109 LREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGV-ASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVIR 187 (679)
T ss_pred EECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEcc-EEEEcccccCCCCceEeCCCCccCeEEeceEEEeeeEEEE
Confidence 99887 899999999999999999999999999999997 599999999999999998764 35999999999999999
Q ss_pred EEEEcccchhHHHHHhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcchHHHHH
Q 003740 320 VTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILE 399 (799)
Q Consensus 320 V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (799)
|+++|.+|++|+|++++++++.++||+|..++.+...+..+.+++++..+. +.++. + . . .
T Consensus 188 Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~---~~~~~-----g-------~---~--~ 247 (679)
T PRK01122 188 ITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVATLPP---FAAYS-----G-------G---A--L 247 (679)
T ss_pred EEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHHHHH---HHHHh-----C-------c---h--H
Confidence 999999999999999999999999999988887766655433322221111 11110 1 0 1 1
Q ss_pred HHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHhhhhhhhcccchhhccCCceeEeecCCCccccCceEEEEEEEcCeeee
Q 003740 400 FFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKE 479 (799)
Q Consensus 400 ~~~~av~ilvva~P~~Lplav~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~ 479 (799)
.+.++++++|++|||+|+.++|++...++++|+++|+++|+++++|+||++|+||||||||||+|+|++++++..+..
T Consensus 248 ~l~~~iallV~aiP~alg~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~-- 325 (679)
T PRK01122 248 SITVLVALLVCLIPTTIGGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPGV-- 325 (679)
T ss_pred HHHHHHHHHHHcccchhhhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCCC--
Confidence 577889999999999999999999999999999999999999999999999999999999999999999988753221
Q ss_pred ecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHH-cCCChHHHhhhcceEEEecC
Q 003740 480 VDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLL-LGGDFQAERQASKIVKVEPF 558 (799)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~-~g~~~~~~~~~~~i~~~~~F 558 (799)
++ ..++ ...+.++.+ +.||.++|+++++.. .+.+.. +..++..+.+||
T Consensus 326 --------------~~--~~ll-~~a~~~s~~------------s~hP~~~AIv~~a~~~~~~~~~--~~~~~~~~~~pF 374 (679)
T PRK01122 326 --------------TE--EELA-DAAQLSSLA------------DETPEGRSIVVLAKQRFNLRER--DLQSLHATFVPF 374 (679)
T ss_pred --------------CH--HHHH-HHHHHhcCC------------CCCchHHHHHHHHHhhcCCCch--hhccccceeEee
Confidence 11 1222 333333221 458999999999876 343321 222456778999
Q ss_pred CCCCceEEEEEEeCCCcEEEEEcCchHHHHHhcccccccCCeEeeCCHHHHHHHHHHHHHHHHhccceeeEEEEEcCCCC
Q 003740 559 NSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEF 638 (799)
Q Consensus 559 ~s~~k~~~vv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~~ 638 (799)
++.+++|++.+. + +.++||++|.+++.|.. +|... .+++.+.++.++++|+|++++|+
T Consensus 375 ~s~~~~~gv~~~---g--~~~~kGa~e~il~~~~~----~g~~~------~~~~~~~~~~~a~~G~~~l~va~------- 432 (679)
T PRK01122 375 SAQTRMSGVDLD---G--REIRKGAVDAIRRYVES----NGGHF------PAELDAAVDEVARKGGTPLVVAE------- 432 (679)
T ss_pred cCcCceEEEEEC---C--EEEEECCHHHHHHHHHh----cCCcC------hHHHHHHHHHHHhCCCcEEEEEE-------
Confidence 999998887542 2 57899999999999963 22221 24567778899999999999983
Q ss_pred CCCCCCCCCcceeeeeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHH
Q 003740 639 SADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDE 718 (799)
Q Consensus 639 ~~~~~~~~~~~~~lg~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~ 718 (799)
|++++|+++++||+|||++++|++||++||+++|+||||+.||.+||++|||.+
T Consensus 433 ---------~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~----------------- 486 (679)
T PRK01122 433 ---------DNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD----------------- 486 (679)
T ss_pred ---------CCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcE-----------------
Confidence 578999999999999999999999999999999999999999999999999964
Q ss_pred HHhhhcCCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC-----ChHh
Q 003740 719 ELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF-----NFSS 793 (799)
Q Consensus 719 ~~~~~~~~~~v~ar~sP~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi-----nf~s 793 (799)
++||++|+||+++|+.+|++ |++|+|||||+||+|||++|||||||| +|||+||||||| ||++
T Consensus 487 ----------v~A~~~PedK~~iV~~lQ~~-G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLldd~~s~ 554 (679)
T PRK01122 487 ----------FLAEATPEDKLALIRQEQAE-GRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAGNMVDLDSNPTK 554 (679)
T ss_pred ----------EEccCCHHHHHHHHHHHHHc-CCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHH
Confidence 99999999999999999999 999999999999999999999999999 999999999999 9999
Q ss_pred HHHhh
Q 003740 794 RKTYI 798 (799)
Q Consensus 794 i~~~i 798 (799)
|++++
T Consensus 555 Iv~av 559 (679)
T PRK01122 555 LIEVV 559 (679)
T ss_pred HHHHH
Confidence 99986
No 16
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=1.2e-92 Score=814.42 Aligned_cols=512 Identities=24% Similarity=0.345 Sum_probs=410.9
Q ss_pred HHHhhHHHHHHHHHHHHHHHhhhccc--CCC-CCcchhHHHHHHHHHHHHHHHHHH----HHHHHHHHHHhhhhcCceeE
Q 003740 169 EALHDMTLMILAVCALVSLVVGIATE--GWP-KGAHDGLGIVMSILLVVFVTATSD----YKQSLQFKDLDREKKKITVQ 241 (799)
Q Consensus 169 ~~l~~~~~~il~i~a~is~~~~~~~~--~~~-~~~~d~~~i~~~illv~~~~~~~~----~~~~~~~~~l~~~~~~~~v~ 241 (799)
..+++|..++++++++++++++.+.+ +.. ..+++++.|++.+++..++..+.+ ++.+++.+.|.+..++.+++
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~ 107 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKAR 107 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEE
Confidence 35678899999999999999887633 111 123566667666666666666653 44444455565544444665
Q ss_pred -EEeCCeEEEEecCCCCcccEEEecCCCeecccEEEEeeceeEEecccccCCCCccccCCC---CCEEEccceeeeceEE
Q 003740 242 -VARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNAL---NPFLLSGTKVQNGSCK 317 (799)
Q Consensus 242 -V~R~g~~~~i~~~~LvvGDiv~l~~Gd~vPaDg~ll~g~~l~vDeS~lTGEs~pv~k~~~---~~~v~sGt~v~~G~~~ 317 (799)
|.|||++++|++++|+|||+|.|++||+|||||++++|+. .||||+|||||.|+.|..+ ++ +|+||.|.+|+++
T Consensus 108 ~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG~~-~VDESaLTGES~PV~K~~g~d~~~-V~aGT~v~~G~~~ 185 (673)
T PRK14010 108 RIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKGLA-TVDESAITGESAPVIKESGGDFDN-VIGGTSVASDWLE 185 (673)
T ss_pred EEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEcce-EEecchhcCCCCceeccCCCccCe-eecCceeecceEE
Confidence 6799999999999999999999999999999999999976 9999999999999999987 66 9999999999999
Q ss_pred EEEEEEcccchhHHHHHhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcchHHH
Q 003740 318 MLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEI 397 (799)
Q Consensus 318 ~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (799)
++|+++|.+|++|+|.+++++++.++||+|..+..+...+. +.++++++++..+. . +. .+
T Consensus 186 i~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l~-----ii~l~~~~~~~~~~--~--------~~-----~~ 245 (673)
T PRK14010 186 VEITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLT-----IIFLVVILTMYPLA--K--------FL-----NF 245 (673)
T ss_pred EEEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHHh-----HHHHHHHHHHHHHH--h--------hc-----cH
Confidence 99999999999999999999999899999977655433322 22222222211110 0 00 12
Q ss_pred HHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHhhhhhhhcccchhhccCCceeEeecCCCccccCceEEEEEEEcCee
Q 003740 398 LEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEI 477 (799)
Q Consensus 398 ~~~~~~av~ilvva~P~~Lplav~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~ 477 (799)
...+.++++++|++|||+||.++|++++.++++|.++|+++|+++++|+||++|+||||||||||+|++.++++...+..
T Consensus 246 ~~~~~~~val~V~~IP~aL~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~~~ 325 (673)
T PRK14010 246 NLSIAMLIALAVCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVKSS 325 (673)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCCCc
Confidence 23566788888899999999999999999999999999999999999999999999999999999988777765432110
Q ss_pred eeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHHHhhhcceEEEec
Q 003740 478 KEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEP 557 (799)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~g~~~~~~~~~~~i~~~~~ 557 (799)
...+++..+. .|+.. +.||+++|+++++.+.+.+.... ..+.+|
T Consensus 326 ------------------~~~~ll~~a~-~~~~~------------s~~P~~~AIv~~a~~~~~~~~~~-----~~~~~p 369 (673)
T PRK14010 326 ------------------SFERLVKAAY-ESSIA------------DDTPEGRSIVKLAYKQHIDLPQE-----VGEYIP 369 (673)
T ss_pred ------------------cHHHHHHHHH-HhcCC------------CCChHHHHHHHHHHHcCCCchhh-----hcceec
Confidence 1122332222 22211 45999999999998776553321 123589
Q ss_pred CCCCCceEEEEEEeCCCcEEEEEcCchHHHHHhcccccccCCeEeeCCHHHHHHHHHHHHHHHHhccceeeEEEEEcCCC
Q 003740 558 FNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNE 637 (799)
Q Consensus 558 F~s~~k~~~vv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~ 637 (799)
|++++|+|++.+. + +.++||+++.+++.|+. +|...+. .+.+.+++++++|+|+++++
T Consensus 370 F~~~~k~~gv~~~--g---~~i~kGa~~~il~~~~~----~g~~~~~------~~~~~~~~~a~~G~~~l~v~------- 427 (673)
T PRK14010 370 FTAETRMSGVKFT--T---REVYKGAPNSMVKRVKE----AGGHIPV------DLDALVKGVSKKGGTPLVVL------- 427 (673)
T ss_pred cccccceeEEEEC--C---EEEEECCHHHHHHHhhh----cCCCCch------HHHHHHHHHHhCCCeEEEEE-------
Confidence 9999999998742 2 24569999999999984 2222221 25566778899999999875
Q ss_pred CCCCCCCCCCcceeeeeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCH
Q 003740 638 FSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSD 717 (799)
Q Consensus 638 ~~~~~~~~~~~~~~lg~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~ 717 (799)
.|++++|+++|+||+|||++++|++||++||+++|+||||+.||.+||+++||..
T Consensus 428 ---------~~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~---------------- 482 (673)
T PRK14010 428 ---------EDNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDR---------------- 482 (673)
T ss_pred ---------ECCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCce----------------
Confidence 3678999999999999999999999999999999999999999999999999975
Q ss_pred HHHhhhcCCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC-----ChH
Q 003740 718 EELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF-----NFS 792 (799)
Q Consensus 718 ~~~~~~~~~~~v~ar~sP~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi-----nf~ 792 (799)
++||++|+||+++|+.||++ |++|+|||||+||||||++|||||||| +|||+||||||+ ||+
T Consensus 483 -----------v~A~~~PedK~~iV~~lQ~~-G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLldd~ls 549 (673)
T PRK14010 483 -----------FVAECKPEDKINVIREEQAK-GHIVAMTGDGTNDAPALAEANVGLAMN-SGTMSAKEAANLIDLDSNPT 549 (673)
T ss_pred -----------EEcCCCHHHHHHHHHHHHhC-CCEEEEECCChhhHHHHHhCCEEEEeC-CCCHHHHHhCCEEEcCCCHH
Confidence 99999999999999999999 999999999999999999999999999 999999999999 999
Q ss_pred hHHHhh
Q 003740 793 SRKTYI 798 (799)
Q Consensus 793 si~~~i 798 (799)
+|++++
T Consensus 550 ~Iv~av 555 (673)
T PRK14010 550 KLMEVV 555 (673)
T ss_pred HHHHHH
Confidence 999886
No 17
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=100.00 E-value=2.7e-89 Score=785.51 Aligned_cols=517 Identities=25% Similarity=0.350 Sum_probs=425.7
Q ss_pred HHHhhHHHHHHHHHHHHHHHhhhcc--cC---CCCCcchhH---HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCcee
Q 003740 169 EALHDMTLMILAVCALVSLVVGIAT--EG---WPKGAHDGL---GIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240 (799)
Q Consensus 169 ~~l~~~~~~il~i~a~is~~~~~~~--~~---~~~~~~d~~---~i~~~illv~~~~~~~~~~~~~~~~~l~~~~~~~~v 240 (799)
.+|+|+.++++++++++++++++.. .+ ....||++. .+++.+++..++++..+++.++++++|.+..++..+
T Consensus 28 ~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a 107 (675)
T TIGR01497 28 AQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFA 107 (675)
T ss_pred HHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceE
Confidence 4678999999999999999987642 11 113588753 344556677778888899999999999886666568
Q ss_pred EEEe-CCeEEEEecCCCCcccEEEecCCCeecccEEEEeeceeEEecccccCCCCccccCCCCC--EEEccceeeeceEE
Q 003740 241 QVAR-NGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNP--FLLSGTKVQNGSCK 317 (799)
Q Consensus 241 ~V~R-~g~~~~i~~~~LvvGDiv~l~~Gd~vPaDg~ll~g~~l~vDeS~lTGEs~pv~k~~~~~--~v~sGt~v~~G~~~ 317 (799)
+|+| ||++++|++++|+|||+|.|++||+|||||++++|+ +.||||+|||||.|+.|..++. .+|+||.|.+|+++
T Consensus 108 ~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG~-~~VDESaLTGES~PV~K~~g~~~~~V~aGT~v~~G~~~ 186 (675)
T TIGR01497 108 KLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEGV-ASVDESAITGESAPVIKESGGDFASVTGGTRILSDWLV 186 (675)
T ss_pred EEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcc-EEEEcccccCCCCceeecCCCCcceeecCcEEEeeEEE
Confidence 8886 899999999999999999999999999999999996 5999999999999999998764 49999999999999
Q ss_pred EEEEEEcccchhHHHHHhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcchHHH
Q 003740 318 MLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEI 397 (799)
Q Consensus 318 ~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (799)
++|+++|.+|++|+|++++++++.++||+|..++.+...+..+.++ +++++|.+.. |.+.
T Consensus 187 i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~li---~~~~~~~~~~------------~~~~----- 246 (675)
T TIGR01497 187 VECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLL---VTATLWPFAA------------YGGN----- 246 (675)
T ss_pred EEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHH---HHHHHHHHHH------------hcCh-----
Confidence 9999999999999999999999999999998888776554432221 1122221111 1110
Q ss_pred HHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHhhhhhhhcccchhhccCCceeEeecCCCccccCceEEEEEEEcCee
Q 003740 398 LEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEI 477 (799)
Q Consensus 398 ~~~~~~av~ilvva~P~~Lplav~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~ 477 (799)
...+.++++++|++|||+|+...+.....++++|+++|+++|+++++|+||++|+||||||||||+|+|++++++..+..
T Consensus 247 ~~~~~~lvallV~aiP~aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~ 326 (675)
T TIGR01497 247 AISVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQGV 326 (675)
T ss_pred hHHHHHHHHHHHHhCchhhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCCC
Confidence 12466779999999999998888888888999999999999999999999999999999999999999999998753211
Q ss_pred eeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHHHhhhcceEEEec
Q 003740 478 KEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEP 557 (799)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~g~~~~~~~~~~~i~~~~~ 557 (799)
+..+++ ..++.++. .+.||+++|+++++.+.+.+... ..++..+..|
T Consensus 327 ------------------~~~~ll-~~aa~~~~------------~s~hP~a~Aiv~~a~~~~~~~~~--~~~~~~~~~p 373 (675)
T TIGR01497 327 ------------------DEKTLA-DAAQLASL------------ADDTPEGKSIVILAKQLGIREDD--VQSLHATFVE 373 (675)
T ss_pred ------------------cHHHHH-HHHHHhcC------------CCCCcHHHHHHHHHHHcCCCccc--cccccceEEE
Confidence 111222 22333321 15689999999999877654322 1234567899
Q ss_pred CCCCCceEEEEEEeCCCcEEEEEcCchHHHHHhcccccccCCeEeeCCHHHHHHHHHHHHHHHHhccceeeEEEEEcCCC
Q 003740 558 FNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNE 637 (799)
Q Consensus 558 F~s~~k~~~vv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~ 637 (799)
|++.++++++.+. ++ +.++||++|.++..|.. +|...| ..+++.+++++++|+|++++|+
T Consensus 374 f~~~~~~sg~~~~--~g--~~~~kGa~e~i~~~~~~----~g~~~~------~~~~~~~~~~a~~G~r~l~va~------ 433 (675)
T TIGR01497 374 FTAQTRMSGINLD--NG--RMIRKGAVDAIKRHVEA----NGGHIP------TDLDQAVDQVARQGGTPLVVCE------ 433 (675)
T ss_pred EcCCCcEEEEEEe--CC--eEEEECCHHHHHHHHHh----cCCCCc------HHHHHHHHHHHhCCCeEEEEEE------
Confidence 9999888877543 22 56899999999998852 222222 3467778899999999999984
Q ss_pred CCCCCCCCCCcceeeeeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCH
Q 003740 638 FSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSD 717 (799)
Q Consensus 638 ~~~~~~~~~~~~~~lg~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~ 717 (799)
+.+++|+++++||+|||++++|++||++||+++|+||||..||.++|+++||..
T Consensus 434 ----------~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~---------------- 487 (675)
T TIGR01497 434 ----------DNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDD---------------- 487 (675)
T ss_pred ----------CCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCE----------------
Confidence 358999999999999999999999999999999999999999999999999965
Q ss_pred HHHhhhcCCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC-----ChH
Q 003740 718 EELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF-----NFS 792 (799)
Q Consensus 718 ~~~~~~~~~~~v~ar~sP~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi-----nf~ 792 (799)
++||++|+||..+|+.+|++ |+.|+|+|||+||+|||++|||||||| +|+++||++||+ ||+
T Consensus 488 -----------v~a~~~PedK~~~v~~lq~~-g~~VamvGDG~NDapAL~~AdvGiAm~-~gt~~akeaadivLldd~~s 554 (675)
T TIGR01497 488 -----------FIAEATPEDKIALIRQEQAE-GKLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSDPT 554 (675)
T ss_pred -----------EEcCCCHHHHHHHHHHHHHc-CCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEECCCCHH
Confidence 99999999999999999999 999999999999999999999999999 999999999999 999
Q ss_pred hHHHhh
Q 003740 793 SRKTYI 798 (799)
Q Consensus 793 si~~~i 798 (799)
+|++++
T Consensus 555 ~Iv~av 560 (675)
T TIGR01497 555 KLIEVV 560 (675)
T ss_pred HHHHHH
Confidence 999886
No 18
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=5.2e-90 Score=849.19 Aligned_cols=624 Identities=25% Similarity=0.329 Sum_probs=495.7
Q ss_pred cCCCccCCCCCccH---HHHHHHHHhhHHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHH
Q 003740 150 YGINKFTESPARGF---WVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSL 226 (799)
Q Consensus 150 ~g~N~~~~~~~~~f---~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~~~~~d~~~i~~~illv~~~~~~~~~~~~~ 226 (799)
|..|.+...+...+ ++.+|+||+.+.++++++++++++++.+... +....+++++++++++++.++.++.
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~-------~~~t~~~pL~~v~~~~~~~~~~ed~ 73 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPT-------YRGTSIVPLAFVLIVTAIKEAIEDI 73 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCC-------CccHhHHhHHHHHHHHHHHHHHHHH
Confidence 56788877766555 6899999999999999999999999876542 2234456777777888999999999
Q ss_pred HHHHHhhhhcCceeEEEeC-CeEEEEecCCCCcccEEEecCCCeecccEEEEeece----eEEecccccCCCCccccCCC
Q 003740 227 QFKDLDREKKKITVQVARN-GFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFS----VLINESSLTGESEPVNVNAL 301 (799)
Q Consensus 227 ~~~~l~~~~~~~~v~V~R~-g~~~~i~~~~LvvGDiv~l~~Gd~vPaDg~ll~g~~----l~vDeS~lTGEs~pv~k~~~ 301 (799)
++++.++..++..++|+|+ |++++|+++||+|||+|.|++||+|||||+++++++ +.||||+|||||.|+.|...
T Consensus 74 ~r~~~d~~~n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~ 153 (1057)
T TIGR01652 74 RRRRRDKEVNNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQAL 153 (1057)
T ss_pred HHHHhHHHHhCcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecc
Confidence 9998888888899999996 899999999999999999999999999999999654 89999999999999988421
Q ss_pred -----------------------------------------------CCEEEccceeee-ceEEEEEEEEcccchhHHHH
Q 003740 302 -----------------------------------------------NPFLLSGTKVQN-GSCKMLVTTVGMRTQWGKLM 333 (799)
Q Consensus 302 -----------------------------------------------~~~v~sGt~v~~-G~~~~~V~~vG~~T~~g~i~ 333 (799)
++++++||.+.+ |++.++|++||.+|.+++
T Consensus 154 ~~~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~-- 231 (1057)
T TIGR01652 154 EETQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMR-- 231 (1057)
T ss_pred hhhhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhh--
Confidence 256889999998 999999999999996654
Q ss_pred HhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccC-----CcchHHHHHHHHHHHHHH
Q 003740 334 ATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWS-----GDDALEILEFFAIAVTIV 408 (799)
Q Consensus 334 ~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~av~il 408 (799)
+......++++++++++++..++..+.++++++++++.. ++........|+.. ......++..|..++.++
T Consensus 232 -n~~~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~---~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L~ 307 (1057)
T TIGR01652 232 -NATQAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAG---IWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLILF 307 (1057)
T ss_pred -cCCCCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHH---heecccCCCccceecCcccccchhHHHHHHHHHHHHH
Confidence 445566678999999999988887777666665554321 11110001112110 011123445677888899
Q ss_pred HHHhCCchhHHHHHHHHHHH------HHHhhh----hhhhcccchhhccCCceeEeecCCCccccCceEEEEEEEcCeee
Q 003740 409 VVAVPEGLPLAVTLSLAFAM------KKMMND----KALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIK 478 (799)
Q Consensus 409 vva~P~~Lplav~l~l~~~~------~~l~~~----~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~ 478 (799)
..++|++||..++++.+..+ .+|.++ +++||+.+++|+||++++||+|||||||+|+|++.++++++..|
T Consensus 308 ~~~IPisL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y 387 (1057)
T TIGR01652 308 SSLIPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSY 387 (1057)
T ss_pred hhhcceeeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEe
Confidence 99999999999999999998 788875 49999999999999999999999999999999999999988776
Q ss_pred eecCCC--------CC---C------CC-C---------------CCCChhHHHHHHHHHHhcCCceEEecCCC---ceE
Q 003740 479 EVDNSK--------GT---P------AF-G---------------SSIPASASKLLLQSIFNNTGGEVVIGEGN---KTE 522 (799)
Q Consensus 479 ~~~~~~--------~~---~------~~-~---------------~~~~~~~~~~l~~~i~~~~~~~~~~~~~~---~~~ 522 (799)
...... .. + .. . .....+....+..++++||++....++++ ..+
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y 467 (1057)
T TIGR01652 388 GDGFTEIKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITY 467 (1057)
T ss_pred cCCcchHHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEE
Confidence 422110 00 0 00 0 00001112334466777777665542222 224
Q ss_pred EcCCchHHHHHHHHHHcCCChHH--------------HhhhcceEEEecCCCCCceEEEEEEeCCCcEEEEEcCchHHHH
Q 003740 523 ILGTPTETAILEFGLLLGGDFQA--------------ERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIIL 588 (799)
Q Consensus 523 ~~g~p~e~All~~~~~~g~~~~~--------------~~~~~~i~~~~~F~s~~k~~~vv~~~~~~~~~~~~KGa~e~il 588 (799)
..++|+|.||++++...|+.+.. ....+++++.+||+|+||||+++++.+++++.+++|||||.|+
T Consensus 468 ~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~e~il 547 (1057)
T TIGR01652 468 QAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIF 547 (1057)
T ss_pred EccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcHHHHH
Confidence 46999999999999988875432 1235788999999999999999999888888999999999999
Q ss_pred HhcccccccCCeEeeCCHHHHHHHHHHHHHHHHhccceeeEEEEEcCCCCCC--------------C--------CCCCC
Q 003740 589 AACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSA--------------D--------APIPT 646 (799)
Q Consensus 589 ~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~~~~--------------~--------~~~~~ 646 (799)
++|+. .+++.++.+.+.+++|+.+|+||+++|||.++++... + .+.+|
T Consensus 548 ~~~~~----------~~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE 617 (1057)
T TIGR01652 548 KRLSS----------GGNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIE 617 (1057)
T ss_pred HHhhc----------cchhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Confidence 99974 1234567788999999999999999999999753100 0 12357
Q ss_pred CcceeeeeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCc----------------------
Q 003740 647 EGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG---------------------- 704 (799)
Q Consensus 647 ~~~~~lg~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~---------------------- 704 (799)
+|++|+|+++++||+||||+++|+.|++|||+|||+|||+++||.+||++|||++++.
T Consensus 618 ~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~ 697 (1057)
T TIGR01652 618 KDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKF 697 (1057)
T ss_pred hcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999987542
Q ss_pred -------------------eeecchhhhccCHH----HHhhhcCCc--eEEEecCcccHHHHHHHHHHhCCCEEEEEcCC
Q 003740 705 -------------------IAIEGPEFREKSDE----ELSKLIPKI--QVMARSSPMDKHTLVKHLRTTLGEVVAVTGDG 759 (799)
Q Consensus 705 -------------------~~~~g~~~~~~~~~----~~~~~~~~~--~v~ar~sP~dK~~lV~~Lq~~~G~vVa~~GDG 759 (799)
++++|+++..+.++ ++.+++.+. .|+||++|+||.++|+.+|+..|++|+|||||
T Consensus 698 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG 777 (1057)
T TIGR01652 698 GLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDG 777 (1057)
T ss_pred HHHHHHHhhhhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCC
Confidence 37788887755443 344455444 59999999999999999998669999999999
Q ss_pred ccCHHhhhcCCeeeecCCCCCH--HHHHhcCC---ChHhHHHhh
Q 003740 760 TNDAPALHEADIGLAMGIAGTE--VELECCCF---NFSSRKTYI 798 (799)
Q Consensus 760 ~NDapAL~~AdVGiamgi~gte--vak~aaDi---nf~si~~~i 798 (799)
+||+|||++||||| |++|+| .|++|||+ +|++|++++
T Consensus 778 ~ND~~mlk~AdVGI--gi~g~eg~qA~~aaD~~i~~F~~L~~ll 819 (1057)
T TIGR01652 778 ANDVSMIQEADVGV--GISGKEGMQAVMASDFAIGQFRFLTKLL 819 (1057)
T ss_pred CccHHHHhhcCeee--EecChHHHHHHHhhhhhhhhHHHHHHHH
Confidence 99999999999999 668899 59999999 999999876
No 19
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2e-91 Score=804.18 Aligned_cols=616 Identities=26% Similarity=0.333 Sum_probs=466.1
Q ss_pred ccccchhhHHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCC-ccccccccccCCcccChhhhhhhhccCCh---HHHHh
Q 003740 42 TANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSS-EYTVPEEVAASGFQICPDELGSIVEGHDI---KKLKV 117 (799)
Q Consensus 42 ~~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~---~~l~~ 117 (799)
++.|..+.| ++++.+++++++||+.++++.+.|++. ..+ ..++...++..||.+............+. +.+.+
T Consensus 13 Ca~C~~~ie-~l~~~~gV~~~~vn~~t~~~~v~~~~~--~~~~~~~~~~~v~~~gy~~~~~~~~~~~~~~~~~~~~~~~~ 89 (713)
T COG2217 13 CAACASRIE-ALNKLPGVEEARVNLATERATVVYDPE--EVDLPADIVAAVEKAGYSARLTAALADPAEAEARLLRELLR 89 (713)
T ss_pred cHHHHHHHH-HHhcCCCeeEEEeecccceEEEEeccc--ccccHHHHHHHHHhcCccccccccccchhhhhhhhhhhHHH
Confidence 346777888 999999999999999999999999865 233 57888889999998765111111111110 12222
Q ss_pred hCCHHHHHHH----hCCCccCCCCccHHHHHHHHHhcCCCccCCCCCccHHHHHHHHHhhHHHHHHH---HHHHHHHHhh
Q 003740 118 HGGVEGIAEK----LSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA---VCALVSLVVG 190 (799)
Q Consensus 118 ~~~v~~l~~~----l~~~~~~Gl~~~~~~~~~r~~~~g~N~~~~~~~~~f~~~~~~~l~~~~~~il~---i~a~is~~~~ 190 (799)
...+.++... +......|. ....+......-......+.|||+.+|+.++.....|.. ++++.+++++
T Consensus 90 ~~~i~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~v~~~~g~~f~~~a~~~l~~~~~~md~Lv~la~~~A~~~s 164 (713)
T COG2217 90 RLIIAGLLTLPLLLLSLGLLLGA-----FLLPWVSFLLATPVLFYGGWPFYRGAWRALRRGRLNMDTLVALATIGAYAYS 164 (713)
T ss_pred HHHHHHHHHHHHHHHHHHhhcch-----hhHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHH
Confidence 2223333321 111111111 011111111111111125788999999999987655422 2223334444
Q ss_pred hcccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh------hhcCceeEEEe-CCeEEEEecCCCCcccEEE
Q 003740 191 IATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDR------EKKKITVQVAR-NGFRRKISIYDLLPGDIVH 263 (799)
Q Consensus 191 ~~~~~~~~~~~d~~~i~~~illv~~~~~~~~~~~~~~~~~l~~------~~~~~~v~V~R-~g~~~~i~~~~LvvGDiv~ 263 (799)
.+..-+. .||+..++++.++++ ++|.+.+...+..+ .+.|..+++++ ||++++||+++|++||+|.
T Consensus 165 ~~~~~~~-~yf~~aa~ii~l~~~------G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~ 237 (713)
T COG2217 165 LYATLFP-VYFEEAAMLIFLFLL------GRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVL 237 (713)
T ss_pred HHHHhhh-hHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEE
Confidence 4321111 677777666655554 77777776554322 24677887776 5668999999999999999
Q ss_pred ecCCCeecccEEEEeeceeEEecccccCCCCccccCCCCCEEEccceeeeceEEEEEEEEcccchhHHHHHhhcCCCCCC
Q 003740 264 LCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDE 343 (799)
Q Consensus 264 l~~Gd~vPaDg~ll~g~~l~vDeS~lTGEs~pv~k~~~~~~v~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~ 343 (799)
|+|||+||+||+|++|++ .||||+|||||.|+.|.+++. |++||.|.+|+.+++|+++|.+|.+++|.+++++++..|
T Consensus 238 VrpGE~IPvDG~V~~G~s-~vDeS~iTGEs~PV~k~~Gd~-V~aGtiN~~G~l~i~vt~~~~dt~la~Ii~LVe~Aq~~K 315 (713)
T COG2217 238 VRPGERIPVDGVVVSGSS-SVDESMLTGESLPVEKKPGDE-VFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSK 315 (713)
T ss_pred ECCCCEecCCeEEEeCcE-EeecchhhCCCCCEecCCCCE-EeeeEEECCccEEEEEEecCccCHHHHHHHHHHHHhhCC
Confidence 999999999999999998 999999999999999999997 999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcchHHHHHHHHHHHHHHHHHhCCchhHHHHHH
Q 003740 344 TPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLS 423 (799)
Q Consensus 344 tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvva~P~~Lplav~l~ 423 (799)
+|+|+..|+++.+|+++++++++++|++|.+..- .+|...|..++++||++|||+|.+++|++
T Consensus 316 a~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~~~-----------------~~~~~a~~~a~avLVIaCPCALgLAtP~a 378 (713)
T COG2217 316 APIQRLADRVASYFVPVVLVIAALTFALWPLFGG-----------------GDWETALYRALAVLVIACPCALGLATPTA 378 (713)
T ss_pred chHHHHHHHHHHccHHHHHHHHHHHHHHHHHhcC-----------------CcHHHHHHHHHhheeeeCccHHHhHHHHH
Confidence 9999999999999999999999999987643210 03556889999999999999999999999
Q ss_pred HHHHHHHHhhhhhhhcccchhhccCCceeEeecCCCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHH
Q 003740 424 LAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQ 503 (799)
Q Consensus 424 l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 503 (799)
+..++.+.+++|+|+|+.+++|+++++|+|+||||||||+|+|+|+++...+. + .++++++.
T Consensus 379 i~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~~~~~--~--------------e~~~L~la-- 440 (713)
T COG2217 379 ILVGIGRAARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVALDG--D--------------EDELLALA-- 440 (713)
T ss_pred HHHHHHHHHhCceEEeChHHHHhhccCCEEEEeCCCCCcCCceEEEEEecCCC--C--------------HHHHHHHH--
Confidence 99999999999999999999999999999999999999999999999876543 0 12444443
Q ss_pred HHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeCCCcEEEEEcCc
Q 003740 504 SIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGA 583 (799)
Q Consensus 504 ~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~g~~~~~~~~~~~i~~~~~F~s~~k~~~vv~~~~~~~~~~~~KGa 583 (799)
++++. .|.||..+||++++...+.... ..|.... -.|+..+..+..+ .-|.
T Consensus 441 -------AalE~-------~S~HPiA~AIv~~a~~~~~~~~-----------~~~~~i~-G~Gv~~~v~g~~v---~vG~ 491 (713)
T COG2217 441 -------AALEQ-------HSEHPLAKAIVKAAAERGLPDV-----------EDFEEIP-GRGVEAEVDGERV---LVGN 491 (713)
T ss_pred -------HHHHh-------cCCChHHHHHHHHHHhcCCCCc-----------cceeeec-cCcEEEEECCEEE---EEcC
Confidence 22222 2889999999998887652100 0111111 1233323333222 2366
Q ss_pred hHHHHHhcccccccCCeEeeCCHHHHHHHHHHHHHHHHhccceeeEEEEEcCCCCCCCCCCCCCcceeeeeecccCCCcc
Q 003740 584 SEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRP 663 (799)
Q Consensus 584 ~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~~R~ 663 (799)
+..+.. .+...+ . ..+..+.+..+|..++.++ .|..++|++++.|++||
T Consensus 492 ~~~~~~--------~~~~~~--~-----~~~~~~~~~~~G~t~v~va----------------~dg~~~g~i~~~D~~R~ 540 (713)
T COG2217 492 ARLLGE--------EGIDLP--L-----LSERIEALESEGKTVVFVA----------------VDGKLVGVIALADELRP 540 (713)
T ss_pred HHHHhh--------cCCCcc--c-----hhhhHHHHHhcCCeEEEEE----------------ECCEEEEEEEEeCCCCh
Confidence 554422 111111 0 3445667778888777776 45689999999999999
Q ss_pred cHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHHHHHH
Q 003740 664 GVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVK 743 (799)
Q Consensus 664 ~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~lV~ 743 (799)
+++++|+.||+.|+++.|+||||..+|++||+++||.. |+|.+.|+||.++|+
T Consensus 541 ~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~---------------------------v~AellPedK~~~V~ 593 (713)
T COG2217 541 DAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDE---------------------------VRAELLPEDKAEIVR 593 (713)
T ss_pred hHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHh---------------------------heccCCcHHHHHHHH
Confidence 99999999999999999999999999999999999965 999999999999999
Q ss_pred HHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC-----ChHhHHHhh
Q 003740 744 HLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF-----NFSSRKTYI 798 (799)
Q Consensus 744 ~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi-----nf~si~~~i 798 (799)
.||++ |++|+|||||+||+|||++|||||||| +|||+|+|+||+ |...+.++|
T Consensus 594 ~l~~~-g~~VamVGDGINDAPALA~AdVGiAmG-~GtDvA~eaADvvL~~~dL~~v~~ai 651 (713)
T COG2217 594 ELQAE-GRKVAMVGDGINDAPALAAADVGIAMG-SGTDVAIEAADVVLMRDDLSAVPEAI 651 (713)
T ss_pred HHHhc-CCEEEEEeCCchhHHHHhhcCeeEeec-CCcHHHHHhCCEEEecCCHHHHHHHH
Confidence 99999 999999999999999999999999999 899999999999 898888876
No 20
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=2e-84 Score=791.00 Aligned_cols=627 Identities=22% Similarity=0.302 Sum_probs=490.5
Q ss_pred hcCCCccCCCCCcc--H-HHHHHHHHhhHHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHH
Q 003740 149 IYGINKFTESPARG--F-WVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQS 225 (799)
Q Consensus 149 ~~g~N~~~~~~~~~--f-~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~~~~~d~~~i~~~illv~~~~~~~~~~~~ 225 (799)
.|..|.+...+... | .+.+|+||+...++++++++++.+++.+... ...+.++++++++++++++++.++
T Consensus 86 ~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~-------~~~t~~~PL~~vl~v~~ike~~Ed 158 (1178)
T PLN03190 86 EFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVF-------GRGASILPLAFVLLVTAVKDAYED 158 (1178)
T ss_pred cCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccC-------CcchHHHHHHHHHHHHHHHHHHHH
Confidence 58899998765432 2 4789999999999999999999998876542 223556788889999999999999
Q ss_pred HHHHHHhhhhcCceeEEEeCCeEEEEecCCCCcccEEEecCCCeecccEEEEeece----eEEecccccCCCCccccCCC
Q 003740 226 LQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFS----VLINESSLTGESEPVNVNAL 301 (799)
Q Consensus 226 ~~~~~l~~~~~~~~v~V~R~g~~~~i~~~~LvvGDiv~l~~Gd~vPaDg~ll~g~~----l~vDeS~lTGEs~pv~k~~~ 301 (799)
.++++.++..++..++|+|+|.++++++.+|+|||+|.|++||+|||||+++++++ +.||||+|||||.|+.|..+
T Consensus 159 ~~r~k~d~~~N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~k~k~~~ 238 (1178)
T PLN03190 159 WRRHRSDRIENNRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYAK 238 (1178)
T ss_pred HHHHHhHHhhcCcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeeeeeEeccc
Confidence 99999999888999999999999999999999999999999999999999999433 79999999999999988421
Q ss_pred --------------------------------------------CCEEEccceeeec-eEEEEEEEEcccchhHHHHHhh
Q 003740 302 --------------------------------------------NPFLLSGTKVQNG-SCKMLVTTVGMRTQWGKLMATL 336 (799)
Q Consensus 302 --------------------------------------------~~~v~sGt~v~~G-~~~~~V~~vG~~T~~g~i~~~~ 336 (799)
+++++.||.+.+. ++.++|++||.+| |++.+-
T Consensus 239 ~~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dT---K~~~N~ 315 (1178)
T PLN03190 239 QETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRET---KAMLNN 315 (1178)
T ss_pred chhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhh---hHhhcC
Confidence 2456777777764 7999999999999 466666
Q ss_pred cCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcc--ccCCc---------c--h----HHHHH
Q 003740 337 SEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHW--TWSGD---------D--A----LEILE 399 (799)
Q Consensus 337 ~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~--~~~~~---------~--~----~~~~~ 399 (799)
..+..+.+++++++|++..++..+.++++++++++... +... .....| .|... . . ...+.
T Consensus 316 ~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~--~~~~-~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (1178)
T PLN03190 316 SGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAV--WLRR-HRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFF 392 (1178)
T ss_pred CCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHh--hhcc-ccccccccccccccccccccccccccchhhHHHHH
Confidence 66667889999999999988877777666655544211 1111 001101 11100 0 0 01122
Q ss_pred HHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHhhhh----------hhhcccchhhccCCceeEeecCCCccccCceEEE
Q 003740 400 FFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDK----------ALVRHLAACETMGSATSICSDKTGTLTTNHMTVL 469 (799)
Q Consensus 400 ~~~~av~ilvva~P~~Lplav~l~l~~~~~~l~~~~----------ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~ 469 (799)
.|...+.++-..+|.+|+..+.+........|.++. +.||+.+..|+||++++||+|||||||+|+|++.
T Consensus 393 ~f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk 472 (1178)
T PLN03190 393 TFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQ 472 (1178)
T ss_pred HHHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEE
Confidence 333445566688999999999999977777777766 7799999999999999999999999999999999
Q ss_pred EEEEcCeeeeecCCC-------------C---CCCCC------------CCCC-h--hHHHHHHHHHHhcCCceEEecCC
Q 003740 470 KACICEEIKEVDNSK-------------G---TPAFG------------SSIP-A--SASKLLLQSIFNNTGGEVVIGEG 518 (799)
Q Consensus 470 ~~~~~~~~~~~~~~~-------------~---~~~~~------------~~~~-~--~~~~~l~~~i~~~~~~~~~~~~~ 518 (799)
++++++..|..+... . .+... .... + .....+..++++||+......++
T Consensus 473 ~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~ 552 (1178)
T PLN03190 473 CASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDD 552 (1178)
T ss_pred EEEECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCC
Confidence 999987766421100 0 00000 0000 0 11233456778888776542111
Q ss_pred --C----ce-EEcCCchHHHHHHHHHHcCC------------ChHHHhhhcceEEEecCCCCCceEEEEEEeCCCcEEEE
Q 003740 519 --N----KT-EILGTPTETAILEFGLLLGG------------DFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVH 579 (799)
Q Consensus 519 --~----~~-~~~g~p~e~All~~~~~~g~------------~~~~~~~~~~i~~~~~F~s~~k~~~vv~~~~~~~~~~~ 579 (799)
+ .. +..++|+|.||+.+|...|+ +....+..+++++++||+|+||||+|+++.+++.+.++
T Consensus 553 ~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~ 632 (1178)
T PLN03190 553 TSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVF 632 (1178)
T ss_pred CCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcCCCcEEEE
Confidence 1 12 34559999999999999987 34445678899999999999999999999888889999
Q ss_pred EcCchHHHHHhcccccccCCeEeeCCHHHHHHHHHHHHHHHHhccceeeEEEEEcCCCCCC-------------------
Q 003740 580 CKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSA------------------- 640 (799)
Q Consensus 580 ~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~~~~------------------- 640 (799)
+|||+|.|+++|+... +++.++.+.+.+++|+.+|+|||++|||+++.+...
T Consensus 633 ~KGA~e~il~~~~~~~---------~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~~ 703 (1178)
T PLN03190 633 VKGADTSMFSVIDRSL---------NMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAAL 703 (1178)
T ss_pred EecCcHHHHHhhcccc---------cchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHHH
Confidence 9999999999997542 233566788899999999999999999999753110
Q ss_pred ---CCCCCCCcceeeeeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCc-------------
Q 003740 641 ---DAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG------------- 704 (799)
Q Consensus 641 ---~~~~~~~~~~~lg~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~------------- 704 (799)
..+.+|.|++++|+++++||+|++++++|+.|+++||+|+|+|||+..||.+||+.|||++++.
T Consensus 704 l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~ 783 (1178)
T PLN03190 704 LRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESC 783 (1178)
T ss_pred HHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhH
Confidence 0134689999999999999999999999999999999999999999999999999999975531
Q ss_pred ------------------------------------eeecchhhhccCH----HHHhhhcCC--ceEEEecCcccHHHHH
Q 003740 705 ------------------------------------IAIEGPEFREKSD----EELSKLIPK--IQVMARSSPMDKHTLV 742 (799)
Q Consensus 705 ------------------------------------~~~~g~~~~~~~~----~~~~~~~~~--~~v~ar~sP~dK~~lV 742 (799)
++++|.++..+.+ +++.++..+ ..|+||++|.||.++|
T Consensus 784 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV 863 (1178)
T PLN03190 784 RKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIV 863 (1178)
T ss_pred HHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHH
Confidence 4667777776654 345555544 4479999999999999
Q ss_pred HHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCCCH--HHHHhcCC---ChHhHHHhhC
Q 003740 743 KHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTE--VELECCCF---NFSSRKTYIL 799 (799)
Q Consensus 743 ~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~gte--vak~aaDi---nf~si~~~i~ 799 (799)
+.+|+..+++|+|+|||+||+|||++||||| ||+|+| .|+.|||+ .|.-+.++++
T Consensus 864 ~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGI--GIsG~EG~qA~~aSDfaI~~Fr~L~rLLl 923 (1178)
T PLN03190 864 ALVKNRTSDMTLAIGDGANDVSMIQMADVGV--GISGQEGRQAVMASDFAMGQFRFLVPLLL 923 (1178)
T ss_pred HHHHhcCCcEEEEECCCcchHHHHHhcCeee--eecCchhHHHHHhhccchhhhHHHHHHHH
Confidence 9999874589999999999999999999999 889999 79999999 9988887764
No 21
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-81 Score=702.12 Aligned_cols=594 Identities=24% Similarity=0.341 Sum_probs=448.3
Q ss_pred ccCCCCccHHHHHHHHHhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHH
Q 003740 132 ITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSIL 211 (799)
Q Consensus 132 ~~~Gl~~~~~~~~~r~~~~g~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~~~~~d~~~i~~~il 211 (799)
.+.||...+ +.+|+..||.|.+.. +.+|.+.++.++.-+|+.....++.++++.-. .+|.+.+|++.-+
T Consensus 157 ~~~gL~~~~--~~~r~~iyG~N~i~l-~ik~i~~iLv~EvL~PfYlFQ~fSv~lW~~d~--------Y~~YA~cI~iisv 225 (1140)
T KOG0208|consen 157 VSNGLERQE--IIDRRIIYGRNVISL-PIKSISQILVKEVLNPFYLFQAFSVALWLADS--------YYYYAFCIVIISV 225 (1140)
T ss_pred ccCCccHHH--HHhHHhhcCCceeee-ecccHHHHHHHhccchHHHHHhHHhhhhhccc--------chhhhhHHHHHHH
Confidence 357888766 889999999999964 56789999999998888766555544433221 2334444443322
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhh-cCceeEEEeCCeEEEEecCCCCcccEEEecC-CCeecccEEEEeeceeEEecccc
Q 003740 212 LVVFVTATSDYKQSLQFKDLDREK-KKITVQVARNGFRRKISIYDLLPGDIVHLCM-GDQVPADGLFVSGFSVLINESSL 289 (799)
Q Consensus 212 lv~~~~~~~~~~~~~~~~~l~~~~-~~~~v~V~R~g~~~~i~~~~LvvGDiv~l~~-Gd~vPaDg~ll~g~~l~vDeS~l 289 (799)
.-+++ .-|...++-.++.+.. ....|+|+|||.+++|.++|||||||+.+.+ |-..|||+++++|+ |.||||||
T Consensus 226 ~Si~~---sv~e~r~qs~rlr~mv~~~~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g~-civNEsmL 301 (1140)
T KOG0208|consen 226 YSIVL---SVYETRKQSIRLRSMVKFTCPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLISGD-CIVNESML 301 (1140)
T ss_pred HHHHH---HHHHHHHHHHHHHHHhcCCceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEEeCc-EEeecccc
Confidence 22233 3343444444454432 3458999999999999999999999999998 99999999999996 79999999
Q ss_pred cCCCCccccCCC------------------CCEEEccceeee------ceEEEEEEEEcccchhHHHHHhhcCCCCCCCh
Q 003740 290 TGESEPVNVNAL------------------NPFLLSGTKVQN------GSCKMLVTTVGMRTQWGKLMATLSEGGDDETP 345 (799)
Q Consensus 290 TGEs~pv~k~~~------------------~~~v~sGt~v~~------G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tp 345 (799)
||||.|+.|.+- .+++|.||++.+ +.+.+.|++||.+|..|++.+++..++.. +
T Consensus 302 TGESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyPkP~--~ 379 (1140)
T KOG0208|consen 302 TGESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYPKPV--N 379 (1140)
T ss_pred cCCcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCCCCc--c
Confidence 999999999521 347999999974 78999999999999999999999887543 3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcchHHHHHHHHHHHHHHHHHhCCchhHHHHHHHH
Q 003740 346 LQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLA 425 (799)
Q Consensus 346 lq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvva~P~~Lplav~l~l~ 425 (799)
++...| +-.|.....++|++.|+...+.+... |. ++-..+..++-++.+.+|++||.+.++...
T Consensus 380 fkfyrd--s~~fi~~l~~ia~~gfiy~~i~l~~~----g~----------~~~~iiirsLDliTi~VPPALPAaltvG~~ 443 (1140)
T KOG0208|consen 380 FKFYRD--SFKFILFLVIIALIGFIYTAIVLNLL----GV----------PLKTIIIRSLDLITIVVPPALPAALTVGII 443 (1140)
T ss_pred cHHHHH--HHHHHHHHHHHHHHHHHHHhHhHHHc----CC----------CHHHHhhhhhcEEEEecCCCchhhhhHHHH
Confidence 332223 33333333444555554433322211 11 345678889999999999999999999999
Q ss_pred HHHHHHhhhhhhhcccchhhccCCceeEeecCCCccccCceEEEEEEEcCeeeeec-------CCCC--CCCCCCCCChh
Q 003740 426 FAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVD-------NSKG--TPAFGSSIPAS 496 (799)
Q Consensus 426 ~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~-------~~~~--~~~~~~~~~~~ 496 (799)
++.+||.|+||+|-+++.+...|+.+++|||||||||++.+.+..+.......... .+.. ...........
T Consensus 444 ~a~~RLkkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 523 (1140)
T KOG0208|consen 444 YAQSRLKKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDSLQLFYKLSLRSSSL 523 (1140)
T ss_pred HHHHHHHhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhhhccceeeccccccCC
Confidence 99999999999999999999999999999999999999999998887643210000 0000 00000000001
Q ss_pred HHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHc-------CCC-------------h-----HHHh----
Q 003740 497 ASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLL-------GGD-------------F-----QAER---- 547 (799)
Q Consensus 497 ~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~-------g~~-------------~-----~~~~---- 547 (799)
....+..+++.||+-.... ....|+|.|.-+.+..... +.. . ....
T Consensus 524 ~~~~~~~a~atCHSL~~v~-----g~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~ 598 (1140)
T KOG0208|consen 524 PMGNLVAAMATCHSLTLVD-----GTLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTECGE 598 (1140)
T ss_pred chHHHHHHHhhhceeEEeC-----CeeccCceeeeeeeccceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcCCC
Confidence 1224556677776433222 2457777776655432100 000 0 0000
Q ss_pred hhcceEEEecCCCCCceEEEEEEeCC-CcEEEEEcCchHHHHHhcccccccCCeEeeCCHHHHHHHHHHHHHHHHhccce
Q 003740 548 QASKIVKVEPFNSVKKQMGVVIELPE-GGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRT 626 (799)
Q Consensus 548 ~~~~i~~~~~F~s~~k~~~vv~~~~~-~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~g~r~ 626 (799)
..+.+++.+||+|.-+||+|++..++ ....+|+|||||.|.+.|+. +.....+++.++.|+.+|+|+
T Consensus 599 ~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p------------~tvP~dy~evl~~Yt~~GfRV 666 (1140)
T KOG0208|consen 599 GEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKP------------ETVPADYQEVLKEYTHQGFRV 666 (1140)
T ss_pred cceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCc------------ccCCccHHHHHHHHHhCCeEE
Confidence 13668999999999999999999764 57899999999999999974 122355889999999999999
Q ss_pred eeEEEEEcCCC-----CCCCCCCCCCcceeeeeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCcc
Q 003740 627 LCLACMEIGNE-----FSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILT 701 (799)
Q Consensus 627 l~~a~~~~~~~-----~~~~~~~~~~~~~~lg~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~ 701 (799)
||+|+|+++.. +...++..|.|++|+|++.|++++|++.+.+|++|++|.||++|+||||..||..+||+|||+.
T Consensus 667 IAlA~K~L~~~~~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~ 746 (1140)
T KOG0208|consen 667 IALASKELETSTLQKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIE 746 (1140)
T ss_pred EEEecCccCcchHHHHhhccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccC
Confidence 99999999876 1234567899999999999999999999999999999999999999999999999999999986
Q ss_pred CCc-------------------------------------------------------eeecchhhhcc---CHHHHhhh
Q 003740 702 DNG-------------------------------------------------------IAIEGPEFREK---SDEELSKL 723 (799)
Q Consensus 702 ~~~-------------------------------------------------------~~~~g~~~~~~---~~~~~~~~ 723 (799)
+.. .+++|+.|+-+ .++.+.++
T Consensus 747 p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~I 826 (1140)
T KOG0208|consen 747 PQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKI 826 (1140)
T ss_pred CCCeEEEEeccCCccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHHHHHHH
Confidence 432 56777777654 45677778
Q ss_pred cCCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecC
Q 003740 724 IPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMG 776 (799)
Q Consensus 724 ~~~~~v~ar~sP~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamg 776 (799)
+.+..|||||+|.||.++|++||+. |..|+|||||.||+.|||+||||||++
T Consensus 827 l~~~~VfARMsP~qK~~Lie~lQkl-~y~VgfCGDGANDCgALKaAdvGISLS 878 (1140)
T KOG0208|consen 827 LLKGTVFARMSPDQKAELIEALQKL-GYKVGFCGDGANDCGALKAADVGISLS 878 (1140)
T ss_pred HhcCeEEeecCchhHHHHHHHHHhc-CcEEEecCCCcchhhhhhhcccCcchh
Confidence 8899999999999999999999998 999999999999999999999999997
No 22
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-82 Score=714.04 Aligned_cols=635 Identities=22% Similarity=0.284 Sum_probs=475.6
Q ss_pred ccchhhHHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCCccccccccccCCcccChhh-hhhhhc-----cCChHH---
Q 003740 44 NLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDE-LGSIVE-----GHDIKK--- 114 (799)
Q Consensus 44 ~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~-----~~~~~~--- 114 (799)
.+....|+.+.+.+++..+++.+.+.++.+.|++. ...+.++...+.+.||...... .....+ ..+.++
T Consensus 159 s~~~~ie~~l~~l~gV~~~sv~~~t~~~~V~~~~~--~~~pr~i~k~ie~~~~~~~~~~~~~~~~~~~l~~~~ei~~w~~ 236 (951)
T KOG0207|consen 159 SCVSKIESILERLRGVKSFSVSLATDTAIVVYDPE--ITGPRDIIKAIEETGFEASVRPYGDTTFKNSLKHKEEIRKWKR 236 (951)
T ss_pred chhhhhHHHHhhccCeeEEEEeccCCceEEEeccc--ccChHHHHHHHHhhcccceeeeccccchhhhhhhhhHHHhcch
Confidence 44556678889999999999999999999998876 5777888888999998754332 111111 111111
Q ss_pred -HHhhCCHHHHHH--Hh-----------CCCccCCCCccHHHHHHHHHhcCCCccCCCCCccHHHHHHHHHhhHHHHHHH
Q 003740 115 -LKVHGGVEGIAE--KL-----------STSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILA 180 (799)
Q Consensus 115 -l~~~~~v~~l~~--~l-----------~~~~~~Gl~~~~~~~~~r~~~~g~N~~~~~~~~~f~~~~~~~l~~~~~~il~ 180 (799)
+....+...... +. ......|+.... .... --.-.....-+++||..+|++++.....|-.
T Consensus 237 ~fl~s~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~---~L~~~vqf~~G~~fy~~A~ksL~~g~~nMdv 311 (951)
T KOG0207|consen 237 PFLISLGFSLPVSFAMIICPPLAWILALLVPFLPGLSYGN--SLSF---VLATPVQFVGGRPFYLAAYKSLKRGSANMDV 311 (951)
T ss_pred HHHHHHHHHHHHHHHHHHhccchhhhhhhccccccchhhh--HHHh---hhheeeEEecceeeHHHHHHHHhcCCCCcee
Confidence 111111111111 11 112333443321 1110 0011111226899999999999988765422
Q ss_pred ---HHHHHHHHhhhcc------cCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh------hhcCceeEEEeC
Q 003740 181 ---VCALVSLVVGIAT------EGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDR------EKKKITVQVARN 245 (799)
Q Consensus 181 ---i~a~is~~~~~~~------~~~~~~~~d~~~i~~~illv~~~~~~~~~~~~~~~~~l~~------~~~~~~v~V~R~ 245 (799)
+.+..++++.+.. ...+..+||...|++.++.+ ++|.+++...+... .+.+.++.++.+
T Consensus 312 Lv~L~t~aay~~S~~~~~~~~~~~~~~tfFdt~~MLi~fi~l------gr~LE~~Ak~kts~alskLmsl~p~~a~ii~~ 385 (951)
T KOG0207|consen 312 LVVLGTTAAYFYSIFSLLAAVVFDSPPTFFDTSPMLITFITL------GRWLESLAKGKTSEALSKLMSLAPSKATIIED 385 (951)
T ss_pred ehhhHHHHHHHHHHHHHHHHHHccCcchhccccHHHHHHHHH------HHHHHHHhhccchHHHHHHhhcCcccceEeec
Confidence 2222222222211 12255788888887766654 89999887654332 246778999998
Q ss_pred Ce-EEEEecCCCCcccEEEecCCCeecccEEEEeeceeEEecccccCCCCccccCCCCCEEEccceeeeceEEEEEEEEc
Q 003740 246 GF-RRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVG 324 (799)
Q Consensus 246 g~-~~~i~~~~LvvGDiv~l~~Gd~vPaDg~ll~g~~l~vDeS~lTGEs~pv~k~~~~~~v~sGt~v~~G~~~~~V~~vG 324 (799)
|+ .++|++..|.+||+|.|.||++||+||++++|++ +||||++|||+.||.|..+++ |.+||.|.+|...+.+|.+|
T Consensus 386 g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv~Gss-~VDEs~iTGEs~PV~Kk~gs~-ViaGsiN~nG~l~VkaT~~g 463 (951)
T KOG0207|consen 386 GSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVVVDGSS-EVDESLITGESMPVPKKKGST-VIAGSINLNGTLLVKATKVG 463 (951)
T ss_pred CCcceEeeeeeeccCCEEEECCCCccccccEEEeCce-eechhhccCCceecccCCCCe-eeeeeecCCceEEEEEEecc
Confidence 86 8899999999999999999999999999999997 999999999999999999887 99999999999999999999
Q ss_pred ccchhHHHHHhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcchHHHHHHHHHH
Q 003740 325 MRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIA 404 (799)
Q Consensus 325 ~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 404 (799)
.+|.+++|.+++++++..++|+|+.+|+++.+|+|+++++++.+|++|++..++...+. ......+..+|..+
T Consensus 464 ~dttla~IvkLVEEAQ~sKapiQq~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~~~~~-------~~~~~~~~~a~~~a 536 (951)
T KOG0207|consen 464 GDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYFVPVVIVLSLATFVVWILIGKIVFKYP-------RSFFDAFSHAFQLA 536 (951)
T ss_pred ccchHHHHHHHHHHHHcccchHHHHHHHhhhcCCchhhHHHHHHHHHHHHHccccccCc-------chhhHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999976543221111 11113677889999
Q ss_pred HHHHHHHhCCchhHHHHHHHHHHHHHHhhhhhhhcccchhhccCCceeEeecCCCccccCceEEEEEEEcCeeeeecCCC
Q 003740 405 VTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSK 484 (799)
Q Consensus 405 v~ilvva~P~~Lplav~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~ 484 (799)
++++++||||+|+||+|++...+....+++|+|+|..+++|++.++++|+||||||||+|+++|+++....+...
T Consensus 537 isVlviACPCaLgLATPtAvmvatgvgA~nGvLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~~~~~----- 611 (951)
T KOG0207|consen 537 ISVLVIACPCALGLATPTAVMVATGVGATNGVLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLSNPIS----- 611 (951)
T ss_pred heEEEEECchhhhcCCceEEEEEechhhhcceEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEecCCccc-----
Confidence 999999999999999999999999999999999999999999999999999999999999999999877654210
Q ss_pred CCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCce
Q 003740 485 GTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQ 564 (799)
Q Consensus 485 ~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~g~~~~~~~~~~~i~~~~~F~s~~k~ 564 (799)
..+.+.+. +..+.+ +.||..+|+.+|++...... ....+.....|..+-+.
T Consensus 612 ---------~~e~l~~v---------~a~Es~-------SeHPig~AIv~yak~~~~~~----~~~~~~~~~~~pg~g~~ 662 (951)
T KOG0207|consen 612 ---------LKEALALV---------AAMESG-------SEHPIGKAIVDYAKEKLVEP----NPEGVLSFEYFPGEGIY 662 (951)
T ss_pred ---------HHHHHHHH---------HHHhcC-------CcCchHHHHHHHHHhccccc----CccccceeecccCCCcc
Confidence 01222222 122222 78999999999998765110 01111222222222211
Q ss_pred EEEEEEeCCCcEEEEEcCchHHHHHhcccccccCCeEeeCCHHHHHHHHHHHHHHHHhccceeeEEEEEcCCCCCCCCCC
Q 003740 565 MGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPI 644 (799)
Q Consensus 565 ~~vv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~~~~~~~~ 644 (799)
+-+...+.. .+-|..+.+. .+|...+ +.+++..++....|..+.+++
T Consensus 663 --~~~~~~~~~---i~iGN~~~~~--------r~~~~~~------~~i~~~~~~~e~~g~tvv~v~-------------- 709 (951)
T KOG0207|consen 663 --VTVTVDGNE---VLIGNKEWMS--------RNGCSIP------DDILDALTESERKGQTVVYVA-------------- 709 (951)
T ss_pred --cceEEeeeE---EeechHHHHH--------hcCCCCc------hhHHHhhhhHhhcCceEEEEE--------------
Confidence 112222222 2236654443 3333222 236667777778898888887
Q ss_pred CCCcceeeeeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhc
Q 003740 645 PTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLI 724 (799)
Q Consensus 645 ~~~~~~~lg~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~ 724 (799)
-|.+++|+++++|++|||+..+|+.||+.||+|.|+||||..||+++|+++||..
T Consensus 710 --vn~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~~----------------------- 764 (951)
T KOG0207|consen 710 --VNGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGIDN----------------------- 764 (951)
T ss_pred --ECCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcce-----------------------
Confidence 4678999999999999999999999999999999999999999999999999765
Q ss_pred CCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC-----ChHhHHHhh
Q 003740 725 PKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF-----NFSSRKTYI 798 (799)
Q Consensus 725 ~~~~v~ar~sP~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi-----nf~si~~~i 798 (799)
|+|...|+||.++||.||++ |++|+|||||+||+|||.+|||||||| .|||+|.|+||| |...++.+|
T Consensus 765 ----V~aev~P~~K~~~Ik~lq~~-~~~VaMVGDGINDaPALA~AdVGIaig-~gs~vAieaADIVLmrn~L~~v~~ai 837 (951)
T KOG0207|consen 765 ----VYAEVLPEQKAEKIKEIQKN-GGPVAMVGDGINDAPALAQADVGIAIG-AGSDVAIEAADIVLMRNDLRDVPFAI 837 (951)
T ss_pred ----EEeccCchhhHHHHHHHHhc-CCcEEEEeCCCCccHHHHhhccceeec-cccHHHHhhCCEEEEccchhhhHHHH
Confidence 99999999999999999999 999999999999999999999999999 889999999999 777777665
No 23
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=100.00 E-value=7.3e-80 Score=730.11 Aligned_cols=604 Identities=21% Similarity=0.267 Sum_probs=452.2
Q ss_pred cccchhhHHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCCccccccccccCCcccChhhhhhhhccCChHHHHhhCCHH
Q 003740 43 ANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGGVE 122 (799)
Q Consensus 43 ~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~v~ 122 (799)
..|....|+.....+++..+++++.+.+..+.|+.. .. ..+...++..||.+.+.+-.......+......+.-.-
T Consensus 65 ~sCa~~Ie~aL~~~~GV~~v~Vn~at~k~~V~~d~~---~~-~~I~~aI~~~Gy~a~~~~~~~~~~~~~~~~~~~~~~~~ 140 (741)
T PRK11033 65 PSCARKVENAVRQLAGVNQVQVLFATEKLVVDADND---IR-AQVESAVQKAGFSLRDEQAAAAAPESRLKSENLPLITL 140 (741)
T ss_pred HHHHHHHHHHHhcCCCeeeEEEEcCCCeEEEEeccc---ch-HHHHHHHHhcccccccccchhhhHHHHHHHHHHHHHHH
Confidence 466777788888888888899999888877777543 11 34455667789987654311100100000001111001
Q ss_pred HHHHHhCCCccCCCCccHHHHHHHHHhcCCCccCCCCCccHHHHHHHHHhhHH-HHH--HH-HHHHHHHHhhhcccCCCC
Q 003740 123 GIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMT-LMI--LA-VCALVSLVVGIATEGWPK 198 (799)
Q Consensus 123 ~l~~~l~~~~~~Gl~~~~~~~~~r~~~~g~N~~~~~~~~~f~~~~~~~l~~~~-~~i--l~-i~a~is~~~~~~~~~~~~ 198 (799)
.....+..-. .++.. ...+...... ....+.||++.+|+.++... +.| |+ ++++.+++++
T Consensus 141 ~~~~~~~~~~-~~~~~----~~~~~~~~~~---~~~~~~~~~~~a~~~l~~~~~~~~~~L~~~a~~~a~~~~-------- 204 (741)
T PRK11033 141 AVMMAISWGL-EQFNH----PFGQLAFIAT---TLVGLYPIARKALRLIRSGSPFAIETLMSVAAIGALFIG-------- 204 (741)
T ss_pred HHHHHHHHHH-hhhhh----HHHHHHHHHH---HHHHHHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHc--------
Confidence 1112221100 01110 0011111010 01245789999999997643 222 33 3444444433
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCceeEEEeCCeEEEEecCCCCcccEEEecCCCeecccEEEEe
Q 003740 199 GAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVS 278 (799)
Q Consensus 199 ~~~d~~~i~~~illv~~~~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~i~~~~LvvGDiv~l~~Gd~vPaDg~ll~ 278 (799)
.|+++..+++.+++.-++....+++.++..++|.+ +.+..++|+|||++++|++++|+|||+|.|++||+|||||+|++
T Consensus 205 ~~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~-l~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~ 283 (741)
T PRK11033 205 ATAEAAMVLLLFLIGERLEGYAASRARRGVSALMA-LVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLS 283 (741)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEE
Confidence 35566555544544444444444444445555555 45678999999999999999999999999999999999999999
Q ss_pred eceeEEecccccCCCCccccCCCCCEEEccceeeeceEEEEEEEEcccchhHHHHHhhcCCCCCCChhHHHHHHHHHHHH
Q 003740 279 GFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIG 358 (799)
Q Consensus 279 g~~l~vDeS~lTGEs~pv~k~~~~~~v~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~ 358 (799)
|+. .||||+|||||.|+.|..++. ||+||.+.+|.++++|+++|.+|.+|+|.+++++++.+++|+|+.+|+++.+++
T Consensus 284 g~~-~vdes~lTGEs~Pv~k~~Gd~-V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~ 361 (741)
T PRK11033 284 PFA-SFDESALTGESIPVERATGEK-VPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYT 361 (741)
T ss_pred CcE-EeecccccCCCCCEecCCCCe-eccCCEEcCceEEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHH
Confidence 985 999999999999999999885 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcchHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHhhhhhhh
Q 003740 359 KIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALV 438 (799)
Q Consensus 359 ~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvva~P~~Lplav~l~l~~~~~~l~~~~ilv 438 (799)
++++++++++|++|.+.+ + . .|...+..++++++++|||+|++++|+++..++.+++|+|+++
T Consensus 362 ~~v~~~a~~~~~~~~~~~-------~--~--------~~~~~i~~a~svlviacPcaL~latP~a~~~~l~~aar~gili 424 (741)
T PRK11033 362 PAIMLVALLVILVPPLLF-------A--A--------PWQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAAARRGALI 424 (741)
T ss_pred HHHHHHHHHHHHHHHHHc-------c--C--------CHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHHHCCeEE
Confidence 999999999998863211 0 0 2345678899999999999999999999999999999999999
Q ss_pred cccchhhccCCceeEeecCCCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCC
Q 003740 439 RHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEG 518 (799)
Q Consensus 439 r~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~ 518 (799)
|+++++|+|+++|+||||||||||+|+|+|++++..+... .++++.+. .. ++.
T Consensus 425 k~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~~---------------~~~~l~~a---a~------~e~--- 477 (741)
T PRK11033 425 KGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHPATGIS---------------ESELLALA---AA------VEQ--- 477 (741)
T ss_pred cCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEecCCCC---------------HHHHHHHH---HH------Hhc---
Confidence 9999999999999999999999999999999987543210 11223222 11 111
Q ss_pred CceEEcCCchHHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceE---EEEEEeCCCcEEEEEcCchHHHHHhccccc
Q 003740 519 NKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQM---GVVIELPEGGFRVHCKGASEIILAACDKFL 595 (799)
Q Consensus 519 ~~~~~~g~p~e~All~~~~~~g~~~~~~~~~~~i~~~~~F~s~~k~~---~vv~~~~~~~~~~~~KGa~e~il~~c~~~~ 595 (799)
.+.||+++|+++++...+.+ .||.++.+.+ ++.....+..+. -|+++.+.+
T Consensus 478 ----~s~hPia~Ai~~~a~~~~~~-------------~~~~~~~~~~~g~Gv~~~~~g~~~~---ig~~~~~~~------ 531 (741)
T PRK11033 478 ----GSTHPLAQAIVREAQVRGLA-------------IPEAESQRALAGSGIEGQVNGERVL---ICAPGKLPP------ 531 (741)
T ss_pred ----CCCCHHHHHHHHHHHhcCCC-------------CCCCcceEEEeeEEEEEEECCEEEE---Eecchhhhh------
Confidence 27899999999998876543 4666666654 232233333332 367665421
Q ss_pred ccCCeEeeCCHHHHHHHHHHHHHHHHhccceeeEEEEEcCCCCCCCCCCCCCcceeeeeecccCCCcccHHHHHHHHHhC
Q 003740 596 NSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSA 675 (799)
Q Consensus 596 ~~~g~~~~l~~~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~~R~~v~~aI~~l~~a 675 (799)
++ ..+.+.++.+..+|++++++++ |.+++|+++|+|++|||++++|++|+++
T Consensus 532 --------~~----~~~~~~~~~~~~~g~~~v~va~----------------~~~~~g~i~l~d~~r~~a~~~i~~L~~~ 583 (741)
T PRK11033 532 --------LA----DAFAGQINELESAGKTVVLVLR----------------NDDVLGLIALQDTLRADARQAISELKAL 583 (741)
T ss_pred --------cc----HHHHHHHHHHHhCCCEEEEEEE----------------CCEEEEEEEEecCCchhHHHHHHHHHHC
Confidence 12 2244556788999999999984 5689999999999999999999999999
Q ss_pred CCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhCCCEEEE
Q 003740 676 GITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAV 755 (799)
Q Consensus 676 GI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~lV~~Lq~~~G~vVa~ 755 (799)
|++++|+|||+..+|.++|+++||. ++++.+|+||..+|+.||+. +.|+|
T Consensus 584 gi~~~llTGd~~~~a~~ia~~lgi~----------------------------~~~~~~p~~K~~~v~~l~~~--~~v~m 633 (741)
T PRK11033 584 GIKGVMLTGDNPRAAAAIAGELGID----------------------------FRAGLLPEDKVKAVTELNQH--APLAM 633 (741)
T ss_pred CCEEEEEcCCCHHHHHHHHHHcCCC----------------------------eecCCCHHHHHHHHHHHhcC--CCEEE
Confidence 9999999999999999999999995 67889999999999999954 68999
Q ss_pred EcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC-----ChHhHHHhh
Q 003740 756 TGDGTNDAPALHEADIGLAMGIAGTEVELECCCF-----NFSSRKTYI 798 (799)
Q Consensus 756 ~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi-----nf~si~~~i 798 (799)
+|||+||+|||++|||||||| +|+++++++||+ ++..|.++|
T Consensus 634 vGDgiNDapAl~~A~vgia~g-~~~~~a~~~adivl~~~~l~~l~~~i 680 (741)
T PRK11033 634 VGDGINDAPAMKAASIGIAMG-SGTDVALETADAALTHNRLRGLAQMI 680 (741)
T ss_pred EECCHHhHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHH
Confidence 999999999999999999999 999999999999 898888765
No 24
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.9e-80 Score=660.46 Aligned_cols=606 Identities=25% Similarity=0.368 Sum_probs=481.8
Q ss_pred hhCCHHHHHHHhCCCccCCCCccHHHHHHHHHhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhhcccCC
Q 003740 117 VHGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGW 196 (799)
Q Consensus 117 ~~~~v~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~g~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~ 196 (799)
..+.++.+.+.|...-. ||++++ +.+|++.||.|++.+++...|.++ +--+.+|.-|..-.+|++...+.-- .|.
T Consensus 19 ~~~p~eeVfeeL~~t~~-GLt~~E--~~eRlk~fG~NkleEkken~~lKF-l~Fm~~PlswVMEaAAimA~~Lang-~~~ 93 (942)
T KOG0205|consen 19 EAIPIEEVFEELLCTRE-GLTSDE--VEERLKIFGPNKLEEKKESKFLKF-LGFMWNPLSWVMEAAAIMAIGLANG-GGR 93 (942)
T ss_pred ccCchhhhHHHHhcCCC-CCchHH--HHHHHHhhCchhhhhhhhhHHHHH-HHHHhchHHHHHHHHHHHHHHHhcC-CCC
Confidence 34567888887776654 999988 999999999999987665555443 3344566667777788776655422 245
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCceeEEEeCCeEEEEecCCCCcccEEEecCCCeecccEEE
Q 003740 197 PKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLF 276 (799)
Q Consensus 197 ~~~~~d~~~i~~~illv~~~~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~i~~~~LvvGDiv~l~~Gd~vPaDg~l 276 (799)
+..|.|-+.|...+++...++.+.+|..-.....|.+.+.+ +..|+|||+|.++.+.+||||||+.++.||+|||||++
T Consensus 94 ~~DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~LA~-KakVlRDGkw~E~eAs~lVPGDIlsik~GdIiPaDaRL 172 (942)
T KOG0205|consen 94 PPDWQDFVGICCLLLINSTISFIEENNAGNAAAALMAGLAP-KAKVLRDGKWSEQEASILVPGDILSIKLGDIIPADARL 172 (942)
T ss_pred CcchhhhhhhheeeeecceeeeeeccccchHHHHHHhccCc-ccEEeecCeeeeeeccccccCceeeeccCCEecCccce
Confidence 66899998888877777777777777777777777765554 78999999999999999999999999999999999999
Q ss_pred EeeceeEEecccccCCCCccccCCCCCEEEccceeeeceEEEEEEEEcccchhHHHHHhhcCCCCCCChhHHHHHHHHHH
Q 003740 277 VSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATI 356 (799)
Q Consensus 277 l~g~~l~vDeS~lTGEs~pv~k~~~~~~v~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~ 356 (799)
++|+-|.||+|.|||||.|+.|.+++. +||||.|.+|.+.++|++||.+|..|+-..++.. ....--+|+-++.+.++
T Consensus 173 l~gD~LkiDQSAlTGESLpvtKh~gd~-vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVds-t~~~GHFqkVLt~IGn~ 250 (942)
T KOG0205|consen 173 LEGDPLKIDQSALTGESLPVTKHPGDE-VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TNQVGHFQKVLTGIGNF 250 (942)
T ss_pred ecCCccccchhhhcCCccccccCCCCc-eecccccccceEEEEEEEeccceeehhhHHhhcC-CCCcccHHHHHHhhhhH
Confidence 999999999999999999999999998 9999999999999999999999999999999988 44458889888888776
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcchHHHHHHHHHHHHHHHHH-hCCchhHHHHHHHHHHHHHHhhhh
Q 003740 357 IGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVA-VPEGLPLAVTLSLAFAMKKMMNDK 435 (799)
Q Consensus 357 ~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvva-~P~~Lplav~l~l~~~~~~l~~~~ 435 (799)
+...+. +.+ ++.+...|.... ...+.....+.++++. +|.|+|..++.+++.+..+|.++|
T Consensus 251 ci~si~-~g~--lie~~vmy~~q~---------------R~~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rLaqqg 312 (942)
T KOG0205|consen 251 CICSIA-LGM--LIEITVMYPIQH---------------RLYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQG 312 (942)
T ss_pred HHHHHH-HHH--HHHHHhhhhhhh---------------hhhhhhhhheheeeecccccccceeeeehhhHHHHHHHhcc
Confidence 543221 111 122222222111 1223333445566666 999999999999999999999999
Q ss_pred hhhcccchhhccCCceeEeecCCCccccCceEEEE--EEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceE
Q 003740 436 ALVRHLAACETMGSATSICSDKTGTLTTNHMTVLK--ACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEV 513 (799)
Q Consensus 436 ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~ 513 (799)
+++++++|+|.|+.++++|+|||||||.|+++|.+ +.+. ....+++.+-++ . |..+ ..
T Consensus 313 AItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~---------------v~gv~~D~~~L~-A--~rAs--r~ 372 (942)
T KOG0205|consen 313 AITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVF---------------VKGVDKDDVLLT-A--ARAS--RK 372 (942)
T ss_pred cHHHHHHHHHHhhCceEEeecCcCceeecceecCcCcceee---------------ecCCChHHHHHH-H--HHHh--hh
Confidence 99999999999999999999999999999999976 2111 011122222221 1 1111 11
Q ss_pred EecCCCceEEcCCchHHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeCCCcEEEEEcCchHHHHHhccc
Q 003740 514 VIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDK 593 (799)
Q Consensus 514 ~~~~~~~~~~~g~p~e~All~~~~~~g~~~~~~~~~~~i~~~~~F~s~~k~~~vv~~~~~~~~~~~~KGa~e~il~~c~~ 593 (799)
+ ..+.+|.|++.... +..+.+..++.++..|||+..||....+..+++..+...|||||.|++.|..
T Consensus 373 e---------n~DAID~A~v~~L~----dPKeara~ikevhF~PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~ 439 (942)
T KOG0205|consen 373 E---------NQDAIDAAIVGMLA----DPKEARAGIKEVHFLPFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNE 439 (942)
T ss_pred c---------ChhhHHHHHHHhhc----CHHHHhhCceEEeeccCCccccceEEEEECCCCCEEEecCCChHHHHHHhhc
Confidence 1 44788999987643 3478888999999999999999999999999999999999999999999973
Q ss_pred ccccCCeEeeCCHHHHHHHHHHHHHHHHhccceeeEEEEEcCCCCCCCCCCCCCcceeeeeecccCCCcccHHHHHHHHH
Q 003740 594 FLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICR 673 (799)
Q Consensus 594 ~~~~~g~~~~l~~~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~~R~~v~~aI~~l~ 673 (799)
+.+.++.+.+.+++|+++|+|.+++|++..++... +.......|+|+.-+-||+|.+..++|+.-.
T Consensus 440 -----------~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~---~~~g~pw~~~gllp~fdpprhdsa~tirral 505 (942)
T KOG0205|consen 440 -----------DHDIPERVHSIIDKFAERGLRSLAVARQEVPEKTK---ESPGGPWEFVGLLPLFDPPRHDSAETIRRAL 505 (942)
T ss_pred -----------cCcchHHHHHHHHHHHHhcchhhhhhhhccccccc---cCCCCCcccccccccCCCCccchHHHHHHHH
Confidence 34566788999999999999999999998876422 2334567899999999999999999999999
Q ss_pred hCCCEEEEEcCCCHHHHHHHHHHcCCccC--Cceeecchhh-hccCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhCC
Q 003740 674 SAGITVRMVTGDNINTAKAIARECGILTD--NGIAIEGPEF-REKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLG 750 (799)
Q Consensus 674 ~aGI~v~mlTGD~~~tA~aiA~~~GI~~~--~~~~~~g~~~-~~~~~~~~~~~~~~~~v~ar~sP~dK~~lV~~Lq~~~G 750 (799)
..|++|.|+|||...-++..++++|.-+. ++..+-|.+- .++......+.+.+..=||...|++|+++|+.||++ |
T Consensus 506 ~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~~~~~~~v~elie~adgfAgVfpehKy~iV~~Lq~r-~ 584 (942)
T KOG0205|consen 506 NLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMPGSPVDELIEKADGFAGVFPEHKYEIVKILQER-K 584 (942)
T ss_pred hccceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCCCCCCCcHHHHhhhccCccccCHHHHHHHHHHHhhc-C
Confidence 99999999999999999999999998653 1111222221 123334455666667789999999999999999999 9
Q ss_pred CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC-----ChHhHHHh
Q 003740 751 EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF-----NFSSRKTY 797 (799)
Q Consensus 751 ~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi-----nf~si~~~ 797 (799)
|.++|+|||+||+||||.||+|||.. .+||.|+.+||| -.|-|+.+
T Consensus 585 hi~gmtgdgvndapaLKkAdigiava-~atdaar~asdiVltepglSviI~a 635 (942)
T KOG0205|consen 585 HIVGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISA 635 (942)
T ss_pred ceecccCCCcccchhhcccccceeec-cchhhhcccccEEEcCCCchhhHHH
Confidence 99999999999999999999999999 999999999999 56655554
No 25
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=100.00 E-value=7.5e-75 Score=669.94 Aligned_cols=499 Identities=27% Similarity=0.390 Sum_probs=391.1
Q ss_pred CccHHHHHHHHHhhHHHHH--HH-HHHHHHHHhhh---ccc-----CCCCCcchhHHHHHHHHHH-HHHHHHHHHHHHHH
Q 003740 160 ARGFWVYVWEALHDMTLMI--LA-VCALVSLVVGI---ATE-----GWPKGAHDGLGIVMSILLV-VFVTATSDYKQSLQ 227 (799)
Q Consensus 160 ~~~f~~~~~~~l~~~~~~i--l~-i~a~is~~~~~---~~~-----~~~~~~~d~~~i~~~illv-~~~~~~~~~~~~~~ 227 (799)
+.|||+.+|+.++...+.| |+ ++.+.+++++. ... +..++||++.+++++++++ -+++...+++.++.
T Consensus 2 g~~~~~~a~~~l~~~~~~md~l~~~~~~~a~~~s~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~le~~~~~~a~~~ 81 (562)
T TIGR01511 2 GRPFYKSAWKALRHKAPNMDTLIALGTTVAYGYSLVALLANQVLTGLHVHTFFDASAMLITFILLGRWLEMLAKGRASDA 81 (562)
T ss_pred cHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5689999999998655433 22 22223333222 111 1224788988776655544 23333333333334
Q ss_pred HHHHhhhhcCceeEEEeC-CeEEEEecCCCCcccEEEecCCCeecccEEEEeeceeEEecccccCCCCccccCCCCCEEE
Q 003740 228 FKDLDREKKKITVQVARN-GFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLL 306 (799)
Q Consensus 228 ~~~l~~~~~~~~v~V~R~-g~~~~i~~~~LvvGDiv~l~~Gd~vPaDg~ll~g~~l~vDeS~lTGEs~pv~k~~~~~~v~ 306 (799)
.++|.+ ..+..++|+|+ |.+++|++++|+|||+|.|++||+|||||++++|++ .||||+|||||.|+.|..++. ||
T Consensus 82 ~~~L~~-~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~g~~-~vdes~lTGEs~pv~k~~gd~-V~ 158 (562)
T TIGR01511 82 LSKLAK-LQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIEGES-EVDESLVTGESLPVPKKVGDP-VI 158 (562)
T ss_pred HHHHHh-cCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEECce-EEehHhhcCCCCcEEcCCCCE-EE
Confidence 444444 45668889885 677999999999999999999999999999999986 999999999999999999886 99
Q ss_pred ccceeeeceEEEEEEEEcccchhHHHHHhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCc
Q 003740 307 SGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTH 386 (799)
Q Consensus 307 sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~ 386 (799)
+||.|.+|+++++|+++|.+|.+|+|.+++.+++..++|+|+.++++++++.++++++++++|++|.
T Consensus 159 aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~~v~~~a~~~~~~~~------------- 225 (562)
T TIGR01511 159 AGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIWL------------- 225 (562)
T ss_pred eeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------
Confidence 9999999999999999999999999999999999999999999999999999999999888887652
Q ss_pred cccCCcchHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHhhhhhhhcccchhhccCCceeEeecCCCccccCce
Q 003740 387 WTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHM 466 (799)
Q Consensus 387 ~~~~~~~~~~~~~~~~~av~ilvva~P~~Lplav~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m 466 (799)
..+..++++++++|||+|++++|+++..++.+++++|+++|+++++|+|+++|+||||||||||+|+|
T Consensus 226 ------------~~~~~~~svlvvacPcaL~la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~ 293 (562)
T TIGR01511 226 ------------FALEFAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKP 293 (562)
T ss_pred ------------HHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEECCCCCCcCCCE
Confidence 25678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHHH
Q 003740 467 TVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAE 546 (799)
Q Consensus 467 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~g~~~~~~ 546 (799)
+|.++...+... .++.+.+. .... ..+.||+++|+++++.+.+.+...
T Consensus 294 ~v~~i~~~~~~~---------------~~~~l~~a---a~~e-------------~~s~HPia~Ai~~~~~~~~~~~~~- 341 (562)
T TIGR01511 294 TVTDVHVFGDRD---------------RTELLALA---AALE-------------AGSEHPLAKAIVSYAKEKGITLVE- 341 (562)
T ss_pred EEEEEecCCCCC---------------HHHHHHHH---HHHh-------------ccCCChHHHHHHHHHHhcCCCcCC-
Confidence 999986543210 11233322 1111 126799999999999876643211
Q ss_pred hhhcceEEEecCCCCCceEEEEEEeCCCcEEEEEcCchHHHHHhcccccccCCeEeeCCHHHHHHHHHHHHHHHHhccce
Q 003740 547 RQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRT 626 (799)
Q Consensus 547 ~~~~~i~~~~~F~s~~k~~~vv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~g~r~ 626 (799)
..+|.... ..++....++.. +..|+++.+.. ++. .++ .+.++|.++
T Consensus 342 --------~~~~~~~~-g~Gi~~~~~g~~---~~iG~~~~~~~--------~~~--~~~------------~~~~~g~~~ 387 (562)
T TIGR01511 342 --------VSDFKAIP-GIGVEGTVEGTK---IQLGNEKLLGE--------NAI--KID------------GKAEQGSTS 387 (562)
T ss_pred --------CCCeEEEC-CceEEEEECCEE---EEEECHHHHHh--------CCC--CCC------------hhhhCCCEE
Confidence 01111100 112222222222 23355554321 111 111 124578888
Q ss_pred eeEEEEEcCCCCCCCCCCCCCcceeeeeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCcee
Q 003740 627 LCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIA 706 (799)
Q Consensus 627 l~~a~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~ 706 (799)
+.++ .|.+++|++.++|++|||++++|+.|++.|+++.|+|||+..++.++|+++||.
T Consensus 388 ~~~~----------------~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~------ 445 (562)
T TIGR01511 388 VLVA----------------VNGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN------ 445 (562)
T ss_pred EEEE----------------ECCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc------
Confidence 7775 567899999999999999999999999999999999999999999999999993
Q ss_pred ecchhhhccCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHh
Q 003740 707 IEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELEC 786 (799)
Q Consensus 707 ~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~a 786 (799)
++++..|++|.++++.++++ |+.|+|+|||.||+||+++|||||+|| .|+++++++
T Consensus 446 ----------------------~~~~~~p~~K~~~v~~l~~~-~~~v~~VGDg~nD~~al~~A~vgia~g-~g~~~a~~~ 501 (562)
T TIGR01511 446 ----------------------VRAEVLPDDKAALIKELQEK-GRVVAMVGDGINDAPALAQADVGIAIG-AGTDVAIEA 501 (562)
T ss_pred ----------------------EEccCChHHHHHHHHHHHHc-CCEEEEEeCCCccHHHHhhCCEEEEeC-CcCHHHHhh
Confidence 78999999999999999998 999999999999999999999999999 899999999
Q ss_pred cCC-----ChHhHHHhh
Q 003740 787 CCF-----NFSSRKTYI 798 (799)
Q Consensus 787 aDi-----nf~si~~~i 798 (799)
||+ ++..+.+++
T Consensus 502 Advvl~~~~l~~l~~~i 518 (562)
T TIGR01511 502 ADVVLMRNDLNDVATAI 518 (562)
T ss_pred CCEEEeCCCHHHHHHHH
Confidence 998 777777654
No 26
>PRK10671 copA copper exporting ATPase; Provisional
Probab=100.00 E-value=1.2e-73 Score=690.35 Aligned_cols=618 Identities=22% Similarity=0.277 Sum_probs=448.3
Q ss_pred cccchhhHHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCCccccccccccCCcccChhhhh--hh--hcc---CChHHH
Q 003740 43 ANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELG--SI--VEG---HDIKKL 115 (799)
Q Consensus 43 ~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~--~~~---~~~~~l 115 (799)
..|....|+.....+++..+++++.+.+..+.. ......+...++..||.+.+.+-. .. .++ ++.+.+
T Consensus 111 a~Ca~~Ie~~L~~~~GV~~a~vnl~t~~~~V~~-----~~s~~~I~~~I~~~Gy~a~~~~~~~~~~~~~~~~~~~~~~~~ 185 (834)
T PRK10671 111 ASCVSRVQNALQSVPGVTQARVNLAERTALVMG-----SASPQDLVQAVEKAGYGAEAIEDDAKRRERQQETAQATMKRF 185 (834)
T ss_pred HHHHHHHHHHHhcCCCceeeeeecCCCeEEEEc-----cCCHHHHHHHHHhcCCCccccccccchhhhhhhhhHHHHHHH
Confidence 356666777777778888888888777655542 122334455567789987542210 00 000 111122
Q ss_pred HhhCCHHHHHH----HhCCCc-cCCCCccHHHHHHHHHhc-CCCccCCCCCccHHHHHHHHHhhHHHHH--HH-HHHHHH
Q 003740 116 KVHGGVEGIAE----KLSTSI-TDGISTSEHLLNRRKEIY-GINKFTESPARGFWVYVWEALHDMTLMI--LA-VCALVS 186 (799)
Q Consensus 116 ~~~~~v~~l~~----~l~~~~-~~Gl~~~~~~~~~r~~~~-g~N~~~~~~~~~f~~~~~~~l~~~~~~i--l~-i~a~is 186 (799)
.+...+..+.. .+..-. ..-+.... ...+...+ ..-......+++|++.+|++++.....| |+ ++++.+
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~a~~~l~~~~~~md~l~~l~~~~a 263 (834)
T PRK10671 186 RWQAIVALAVGIPVMVWGMIGDNMMVTADN--RSLWLVIGLITLAVMVFAGGHFYRSAWKSLLNGSATMDTLVALGTGAA 263 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccCccc--hhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHH
Confidence 22222333332 111100 00011110 00111000 0000011247789999999998654433 22 222233
Q ss_pred HHhhh----c----ccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHhhhhcCceeEEEeCCeEEEE
Q 003740 187 LVVGI----A----TEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFK-------DLDREKKKITVQVARNGFRRKI 251 (799)
Q Consensus 187 ~~~~~----~----~~~~~~~~~d~~~i~~~illv~~~~~~~~~~~~~~~~-------~l~~~~~~~~v~V~R~g~~~~i 251 (799)
+++++ . ..+..+.|||..+++++++++ ++|.+++... +|.+ +.+..++|+|+|++++|
T Consensus 264 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~------g~~le~~~~~~~~~~~~~L~~-l~p~~a~~~~~~~~~~v 336 (834)
T PRK10671 264 WLYSMSVNLWPQWFPMEARHLYYEASAMIIGLINL------GHMLEARARQRSSKALEKLLD-LTPPTARVVTDEGEKSV 336 (834)
T ss_pred HHHHHHHHHhhcccccccchhhHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHhc-cCCCEEEEEeCCcEEEE
Confidence 33322 1 111123588877666544443 5555555433 3333 45678999999999999
Q ss_pred ecCCCCcccEEEecCCCeecccEEEEeeceeEEecccccCCCCccccCCCCCEEEccceeeeceEEEEEEEEcccchhHH
Q 003740 252 SIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGK 331 (799)
Q Consensus 252 ~~~~LvvGDiv~l~~Gd~vPaDg~ll~g~~l~vDeS~lTGEs~pv~k~~~~~~v~sGt~v~~G~~~~~V~~vG~~T~~g~ 331 (799)
++++|+|||+|.|++||+|||||+|++|+. .||||+|||||.|+.|..++. ||+||.|.+|+++++|+++|.+|.+++
T Consensus 337 ~~~~l~~GD~v~v~~G~~iP~Dg~v~~g~~-~vdeS~lTGEs~pv~k~~gd~-V~aGt~~~~G~~~~~v~~~g~~t~l~~ 414 (834)
T PRK10671 337 PLADVQPGMLLRLTTGDRVPVDGEITQGEA-WLDEAMLTGEPIPQQKGEGDS-VHAGTVVQDGSVLFRASAVGSHTTLSR 414 (834)
T ss_pred EHHHcCCCCEEEEcCCCEeeeeEEEEEceE-EEeehhhcCCCCCEecCCCCE-EEecceecceeEEEEEEEEcCcChHHH
Confidence 999999999999999999999999999975 999999999999999999885 999999999999999999999999999
Q ss_pred HHHhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcchHHHHHHHHHHHHHHHHH
Q 003740 332 LMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVA 411 (799)
Q Consensus 332 i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvva 411 (799)
|.+++++++..++|+|+.+++++.+|.+++++++++++++|++. +. + ..+...+..++++++++
T Consensus 415 i~~lv~~a~~~k~~~~~~~d~~a~~~v~~v~~~a~~~~~~~~~~--------~~---~-----~~~~~~~~~a~~vlv~a 478 (834)
T PRK10671 415 IIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALVSAAIWYFF--------GP---A-----PQIVYTLVIATTVLIIA 478 (834)
T ss_pred HHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------CC---c-----hHHHHHHHHHHHHHHHh
Confidence 99999999989999999999999999999999999888877431 00 0 12455778899999999
Q ss_pred hCCchhHHHHHHHHHHHHHHhhhhhhhcccchhhccCCceeEeecCCCccccCceEEEEEEEcCeeeeecCCCCCCCCCC
Q 003740 412 VPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGS 491 (799)
Q Consensus 412 ~P~~Lplav~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~ 491 (799)
|||+|++++|+++..++++++++|+|+|+++++|+|+++|++|||||||||+|+|+|.+++..+..
T Consensus 479 cPcaL~la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~-------------- 544 (834)
T PRK10671 479 CPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTFNGV-------------- 544 (834)
T ss_pred cccchhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEccCCC--------------
Confidence 999999999999999999999999999999999999999999999999999999999987654321
Q ss_pred CCChhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEe
Q 003740 492 SIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIEL 571 (799)
Q Consensus 492 ~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~g~~~~~~~~~~~i~~~~~F~s~~k~~~vv~~~ 571 (799)
++ .+++..+...++. +.||+++|+++++...... ...+|..... .++....
T Consensus 545 --~~--~~~l~~a~~~e~~-------------s~hp~a~Ai~~~~~~~~~~-----------~~~~~~~~~g-~Gv~~~~ 595 (834)
T PRK10671 545 --DE--AQALRLAAALEQG-------------SSHPLARAILDKAGDMTLP-----------QVNGFRTLRG-LGVSGEA 595 (834)
T ss_pred --CH--HHHHHHHHHHhCC-------------CCCHHHHHHHHHHhhCCCC-----------CcccceEecc-eEEEEEE
Confidence 11 1223222233221 6799999999987533211 1122332222 2332223
Q ss_pred CCCcEEEEEcCchHHHHHhcccccccCCeEeeCCHHHHHHHHHHHHHHHHhccceeeEEEEEcCCCCCCCCCCCCCccee
Q 003740 572 PEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTC 651 (799)
Q Consensus 572 ~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~~~~~~~~~~~~~~~ 651 (799)
++. .++.|+++.+.... +. ...+.+.++.+..+|.+++.+++ +..+
T Consensus 596 ~g~---~~~~G~~~~~~~~~------------~~---~~~~~~~~~~~~~~g~~~v~va~----------------~~~~ 641 (834)
T PRK10671 596 EGH---ALLLGNQALLNEQQ------------VD---TKALEAEITAQASQGATPVLLAV----------------DGKA 641 (834)
T ss_pred CCE---EEEEeCHHHHHHcC------------CC---hHHHHHHHHHHHhCCCeEEEEEE----------------CCEE
Confidence 332 24558888663311 11 12355667778889999998874 4578
Q ss_pred eeeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEE
Q 003740 652 IGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMA 731 (799)
Q Consensus 652 lg~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~a 731 (799)
+|++++.|++|||++++|+.|++.|+++.|+|||+..+|.++|+++||.. +++
T Consensus 642 ~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~---------------------------~~~ 694 (834)
T PRK10671 642 AALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDE---------------------------VIA 694 (834)
T ss_pred EEEEEccCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCE---------------------------EEe
Confidence 99999999999999999999999999999999999999999999999964 999
Q ss_pred ecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC-----ChHhHHHhh
Q 003740 732 RSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF-----NFSSRKTYI 798 (799)
Q Consensus 732 r~sP~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi-----nf~si~~~i 798 (799)
+..|++|.++++.++.+ |+.|+|+|||.||+|||++|||||+|| +|++.++++||+ |+..|.+++
T Consensus 695 ~~~p~~K~~~i~~l~~~-~~~v~~vGDg~nD~~al~~Agvgia~g-~g~~~a~~~ad~vl~~~~~~~i~~~i 764 (834)
T PRK10671 695 GVLPDGKAEAIKRLQSQ-GRQVAMVGDGINDAPALAQADVGIAMG-GGSDVAIETAAITLMRHSLMGVADAL 764 (834)
T ss_pred CCCHHHHHHHHHHHhhc-CCEEEEEeCCHHHHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHH
Confidence 99999999999999999 999999999999999999999999999 999999999999 898888775
No 27
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=100.00 E-value=7.9e-74 Score=657.51 Aligned_cols=442 Identities=39% Similarity=0.593 Sum_probs=387.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh-hhcCceeEEEeCCeEEEEecCCCCcccEEEecCCCeecccEEEEeeceeEEecc
Q 003740 209 SILLVVFVTATSDYKQSLQFKDLDR-EKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINES 287 (799)
Q Consensus 209 ~illv~~~~~~~~~~~~~~~~~l~~-~~~~~~v~V~R~g~~~~i~~~~LvvGDiv~l~~Gd~vPaDg~ll~g~~l~vDeS 287 (799)
++++..+++...+++.++..+++.+ ..++..++|+|+| +++|++++|+|||+|.+++||+|||||++++|+ +.||||
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g~-~~vdes 82 (499)
T TIGR01494 5 LVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSGS-CFVDES 82 (499)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEcc-EEEEcc
Confidence 4455666777777777777877776 3567799999999 999999999999999999999999999999996 699999
Q ss_pred cccCCCCccccCCCCCEEEccceeeeceEEEEEEEEcccchhHHHHHhhcCCCCCCChhHHHHHHHH-HHHHHHHHHHHH
Q 003740 288 SLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVA-TIIGKIGLFFAV 366 (799)
Q Consensus 288 ~lTGEs~pv~k~~~~~~v~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a-~~~~~~~l~~a~ 366 (799)
+|||||.|+.|.+++. +++||.+.+|++++.|+.+|.+|..+++...+.++...++|+|.++++++ .++.++.+++++
T Consensus 83 ~LTGEs~pv~k~~g~~-v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la~ 161 (499)
T TIGR01494 83 NLTGESVPVLKTAGDA-VFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIAL 161 (499)
T ss_pred cccCCCCCeeeccCCc-cccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998886 99999999999999999999999999999999888887899999999999 788888888888
Q ss_pred HHHHHHHHHHhhhhccCCCccccCCcchHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHhhhhhhhcccchhhc
Q 003740 367 VTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACET 446 (799)
Q Consensus 367 l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvva~P~~Lplav~l~l~~~~~~l~~~~ilvr~~~a~E~ 446 (799)
+++++|+..+.. .. .+...|..++++++++|||+||+++|+++..+..+|.++|+++|+++++|+
T Consensus 162 ~~~~~~~~~~~~------------~~---~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~ 226 (499)
T TIGR01494 162 AVFLFWAIGLWD------------PN---SIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSLNALEE 226 (499)
T ss_pred HHHHHHHHHHcc------------cc---cHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhh
Confidence 888776543210 00 255788999999999999999999999999999999999999999999999
Q ss_pred cCCceeEeecCCCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceEEcCC
Q 003740 447 MGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGT 526 (799)
Q Consensus 447 lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~ 526 (799)
||+++++|||||||||+|+|+|.++++.+. .+.++|
T Consensus 227 l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~--------------------------------------------~~~s~h 262 (499)
T TIGR01494 227 LGKVDYICSDKTGTLTKNEMSFKKVSVLGG--------------------------------------------EYLSGH 262 (499)
T ss_pred ccCCcEEEeeCCCccccCceEEEEEEecCC--------------------------------------------CcCCCC
Confidence 999999999999999999999998875321 012789
Q ss_pred chHHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeCCCcEEEEEcCchHHHHHhcccccccCCeEeeCCH
Q 003740 527 PTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNE 606 (799)
Q Consensus 527 p~e~All~~~~~~g~~~~~~~~~~~i~~~~~F~s~~k~~~vv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~ 606 (799)
|.|+|+++++.... +...||++.+++|+++++.+++ .++||+++.+++.|..
T Consensus 263 p~~~ai~~~~~~~~------------~~~~~f~~~~~~~~~~~~~~~~---~~~~G~~~~i~~~~~~------------- 314 (499)
T TIGR01494 263 PDERALVKSAKWKI------------LNVFEFSSVRKRMSVIVRGPDG---TYVKGAPEFVLSRVKD------------- 314 (499)
T ss_pred hHHHHHHHHhhhcC------------cceeccCCCCceEEEEEecCCc---EEEeCCHHHHHHhhHH-------------
Confidence 99999999886421 2468999999999998875333 4789999999988853
Q ss_pred HHHHHHHHHHHHHHHhccceeeEEEEEcCCCCCCCCCCCCCcceeeeeecccCCCcccHHHHHHHHHhCCCEEEEEcCCC
Q 003740 607 AAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDN 686 (799)
Q Consensus 607 ~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~ 686 (799)
+.+..+.++.+|+|++++|++ .+++|+++++|++||+++++|+.|+++|++++|+|||+
T Consensus 315 -----~~~~~~~~~~~g~~~~~~a~~----------------~~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~ 373 (499)
T TIGR01494 315 -----LEEKVKELAQSGLRVLAVASK----------------ETLLGLLGLEDPLRDDAKETISELREAGIRVIMLTGDN 373 (499)
T ss_pred -----HHHHHHHHHhCCCEEEEEEEC----------------CeEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCC
Confidence 122344577899999999963 26899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHhh
Q 003740 687 INTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPAL 766 (799)
Q Consensus 687 ~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL 766 (799)
..+|.++|+++|| +++++|+||.++|+.+|+. |+.|+|+|||+||+|||
T Consensus 374 ~~~a~~ia~~lgi------------------------------~~~~~p~~K~~~v~~l~~~-g~~v~~vGDg~nD~~al 422 (499)
T TIGR01494 374 VLTAKAIAKELGI------------------------------FARVTPEEKAALVEALQKK-GRVVAMTGDGVNDAPAL 422 (499)
T ss_pred HHHHHHHHHHcCc------------------------------eeccCHHHHHHHHHHHHHC-CCEEEEECCChhhHHHH
Confidence 9999999999996 4889999999999999999 99999999999999999
Q ss_pred hcCCeeeecCCCCCHHHHHhcCC-----ChHhHHHhh
Q 003740 767 HEADIGLAMGIAGTEVELECCCF-----NFSSRKTYI 798 (799)
Q Consensus 767 ~~AdVGiamgi~gtevak~aaDi-----nf~si~~~i 798 (799)
++|||||||| |+++||+ |+.++..++
T Consensus 423 ~~Advgia~~------a~~~adivl~~~~l~~i~~~~ 453 (499)
T TIGR01494 423 KKADVGIAMG------AKAAADIVLLDDNLSTIVDAL 453 (499)
T ss_pred HhCCCccccc------hHHhCCeEEecCCHHHHHHHH
Confidence 9999999997 7999999 788887765
No 28
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=100.00 E-value=1.3e-73 Score=661.62 Aligned_cols=487 Identities=28% Similarity=0.386 Sum_probs=400.4
Q ss_pred HHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCceeEEEeCC-eEEEEecCCCCc
Q 003740 180 AVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNG-FRRKISIYDLLP 258 (799)
Q Consensus 180 ~i~a~is~~~~~~~~~~~~~~~d~~~i~~~illv~~~~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g-~~~~i~~~~Lvv 258 (799)
.++++++++++ .|.++..+++++++..++....+++.++...++.+ ..+..++|+|+| ++++|+.++|+|
T Consensus 6 ~~~~~~~~~~~--------~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~-~~~~~~~v~r~~g~~~~i~~~~l~~ 76 (556)
T TIGR01525 6 ALATIAAYAMG--------LVLEGALLLFLFLLGETLEERAKGRASDALSALLA-LAPSTARVLQGDGSEEEVPVEELQV 76 (556)
T ss_pred HHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCEEEEEECCCeEEEEEHHHCCC
Confidence 34445555554 35566666666666666666666666666666655 456689999995 999999999999
Q ss_pred ccEEEecCCCeecccEEEEeeceeEEecccccCCCCccccCCCCCEEEccceeeeceEEEEEEEEcccchhHHHHHhhcC
Q 003740 259 GDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSE 338 (799)
Q Consensus 259 GDiv~l~~Gd~vPaDg~ll~g~~l~vDeS~lTGEs~pv~k~~~~~~v~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~ 338 (799)
||+|.+++||+|||||++++|+. .||||+|||||.|+.|..++. ||+||.+.+|.++++|+++|.+|++|++.+.+.+
T Consensus 77 GDiv~v~~G~~iP~Dg~vi~g~~-~vdes~lTGEs~pv~k~~g~~-v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~~~ 154 (556)
T TIGR01525 77 GDIVIVRPGERIPVDGVVISGES-EVDESALTGESMPVEKKEGDE-VFAGTINGDGSLTIRVTKLGEDSTLAQIVKLVEE 154 (556)
T ss_pred CCEEEECCCCEeccceEEEecce-EEeehhccCCCCCEecCCcCE-EeeceEECCceEEEEEEEecccCHHHHHHHHHHH
Confidence 99999999999999999999985 999999999999999998875 9999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcchHHHHHHHHHHHHHHHHHhCCchhH
Q 003740 339 GGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPL 418 (799)
Q Consensus 339 ~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvva~P~~Lpl 418 (799)
...+++|+|+.+++++.++.++++++++++|++|++... . ..+..++++++++|||+||+
T Consensus 155 ~~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~~~-------------------~-~~~~~~~~vlv~~~P~al~l 214 (556)
T TIGR01525 155 AQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLALGA-------------------L-GALYRALAVLVVACPCALGL 214 (556)
T ss_pred HhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-------------------c-hHHHHHHHHHhhccccchhe
Confidence 888899999999999999999999999998887643210 0 46788999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhhhcccchhhccCCceeEeecCCCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHH
Q 003740 419 AVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASAS 498 (799)
Q Consensus 419 av~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (799)
++|++++.++++|.++|+++|+++++|+||++|++|||||||||+|+|+|.+++..+... ...++.+
T Consensus 215 ~~~~~~~~~~~~~~~~gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~-------------~~~~~~l 281 (556)
T TIGR01525 215 ATPVAILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDAS-------------ISEEELL 281 (556)
T ss_pred hhHHHHHHHHHHHHHCCceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCCC-------------ccHHHHH
Confidence 999999999999999999999999999999999999999999999999999987653221 0011222
Q ss_pred HHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeCCCcEEE
Q 003740 499 KLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRV 578 (799)
Q Consensus 499 ~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~g~~~~~~~~~~~i~~~~~F~s~~k~~~vv~~~~~~~~~~ 578 (799)
.+ +... + ..+.||+++|+++++.+.+.+... +| + ....++.++..
T Consensus 282 ~~---a~~~------e-------~~~~hp~~~Ai~~~~~~~~~~~~~-----------~~----~----~~~~~~~gi~~ 326 (556)
T TIGR01525 282 AL---AAAL------E-------QSSSHPLARAIVRYAKKRGLELPK-----------QE----D----VEEVPGKGVEA 326 (556)
T ss_pred HH---HHHH------h-------ccCCChHHHHHHHHHHhcCCCccc-----------cc----C----eeEecCCeEEE
Confidence 22 1111 1 126799999999999877654211 11 0 01234556777
Q ss_pred EEcCchHHHHHhcccccccCCeEeeCCHHHHHHHHHHHHHHHHhccceeeEEEEEcCCCCCCCCCCCCCcceeeeeeccc
Q 003740 579 HCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIK 658 (799)
Q Consensus 579 ~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~~~~~~~~~~~~~~~lg~~~~~ 658 (799)
+++|+++..+..|+.. ..++.. ...++..++.++.+|++++.++ .|.+++|.+.++
T Consensus 327 ~~~g~~~~~lg~~~~~-~~~~~~-------~~~~~~~~~~~~~~g~~~~~v~----------------~~~~~~g~i~~~ 382 (556)
T TIGR01525 327 TVDGQEEVRIGNPRLL-ELAAEP-------ISASPDLLNEGESQGKTVVFVA----------------VDGELLGVIALR 382 (556)
T ss_pred EECCeeEEEEecHHHH-hhcCCC-------chhhHHHHHHHhhCCcEEEEEE----------------ECCEEEEEEEec
Confidence 7777667777777632 111111 1112345567788999999887 356899999999
Q ss_pred CCCcccHHHHHHHHHhCC-CEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCccc
Q 003740 659 DPMRPGVKESVAICRSAG-ITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (799)
Q Consensus 659 D~~R~~v~~aI~~l~~aG-I~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~d 737 (799)
|++|||++++|+.|+++| +++.|+|||+..++.++++++||.. +|++..|+|
T Consensus 383 d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~---------------------------~f~~~~p~~ 435 (556)
T TIGR01525 383 DQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDE---------------------------VHAELLPED 435 (556)
T ss_pred ccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCe---------------------------eeccCCHHH
Confidence 999999999999999999 9999999999999999999999964 899999999
Q ss_pred HHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC-----ChHhHHHhh
Q 003740 738 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF-----NFSSRKTYI 798 (799)
Q Consensus 738 K~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi-----nf~si~~~i 798 (799)
|..+++.+++. |+.|+|+|||.||+||+++||||++|| ++++.++++||+ |++.|.+++
T Consensus 436 K~~~v~~l~~~-~~~v~~vGDg~nD~~al~~A~vgia~g-~~~~~~~~~Ad~vi~~~~~~~l~~~i 499 (556)
T TIGR01525 436 KLAIVKELQEE-GGVVAMVGDGINDAPALAAADVGIAMG-AGSDVAIEAADIVLLNDDLSSLPTAI 499 (556)
T ss_pred HHHHHHHHHHc-CCEEEEEECChhHHHHHhhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHHHHHHH
Confidence 99999999998 999999999999999999999999999 999999999999 899888775
No 29
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=100.00 E-value=5.5e-72 Score=644.05 Aligned_cols=466 Identities=28% Similarity=0.348 Sum_probs=381.9
Q ss_pred HHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCceeEEEeCCeEEEEecCCCCc
Q 003740 179 LAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLP 258 (799)
Q Consensus 179 l~i~a~is~~~~~~~~~~~~~~~d~~~i~~~illv~~~~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~i~~~~Lvv 258 (799)
+.++++++++++ .|+|+..+++.+++..+++...+++.++..+++.+ ..+..++|+|||++++|++++|+|
T Consensus 5 ~~~a~~~~~~~~--------~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~-~~~~~~~v~r~g~~~~i~~~~l~~ 75 (536)
T TIGR01512 5 MALAALGAVAIG--------EYLEGALLLLLFSIGETLEEYASGRARRALKALME-LAPDTARVLRGGSLEEVAVEELKV 75 (536)
T ss_pred HHHHHHHHHHHh--------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCEEEEEECCEEEEEEHHHCCC
Confidence 445556666554 48899777666666666666666666666666665 456689999999999999999999
Q ss_pred ccEEEecCCCeecccEEEEeeceeEEecccccCCCCccccCCCCCEEEccceeeeceEEEEEEEEcccchhHHHHHhhcC
Q 003740 259 GDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSE 338 (799)
Q Consensus 259 GDiv~l~~Gd~vPaDg~ll~g~~l~vDeS~lTGEs~pv~k~~~~~~v~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~ 338 (799)
||+|.+++||+|||||++++|+. .||||+|||||.|+.|..++. +|+||.+.+|+++++|+++|.+|.+|+|.+++.+
T Consensus 76 GDiv~v~~G~~iP~Dg~ii~g~~-~vdes~lTGEs~pv~k~~g~~-v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~~~ 153 (536)
T TIGR01512 76 GDVVVVKPGERVPVDGVVLSGTS-TVDESALTGESVPVEKAPGDE-VFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEE 153 (536)
T ss_pred CCEEEEcCCCEeecceEEEeCcE-EEEecccCCCCCcEEeCCCCE-EEeeeEECCceEEEEEEEeccccHHHHHHHHHHH
Confidence 99999999999999999999975 999999999999999998875 9999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcchHHHHHHHHHHHHHHHHHhCCchhH
Q 003740 339 GGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPL 418 (799)
Q Consensus 339 ~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvva~P~~Lpl 418 (799)
.+.+++|+|+.+++++.++.++.++++++++++|.+. . . +...+..++++++++|||+||+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~------------~----~~~~~~~~~svlv~~~P~aL~l 214 (536)
T TIGR01512 154 AQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLL---K------------R----WPFWVYRALVLLVVASPCALVI 214 (536)
T ss_pred HhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---c------------c----cHHHHHHHHHHHhhcCcccccc
Confidence 8888999999999999999999998888777765321 0 0 1126778999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhhhcccchhhccCCceeEeecCCCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHH
Q 003740 419 AVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASAS 498 (799)
Q Consensus 419 av~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (799)
++|+++..++++|.++|+++|+++++|++|++|++|||||||||+|+|+|.+++.. +.+
T Consensus 215 a~~~~~~~~~~~~~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~---------------------~~l 273 (536)
T TIGR01512 215 SAPAAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPA---------------------EVL 273 (536)
T ss_pred chHHHHHHHHHHHHHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeHH---------------------HHH
Confidence 99999999999999999999999999999999999999999999999999887531 222
Q ss_pred HHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCce--EEEEEEeCCCcE
Q 003740 499 KLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQ--MGVVIELPEGGF 576 (799)
Q Consensus 499 ~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~g~~~~~~~~~~~i~~~~~F~s~~k~--~~vv~~~~~~~~ 576 (799)
... ... + ..+.||+++|+++++.+.+ +|++.+.. .++.....+..+
T Consensus 274 ~~a---~~~------e-------~~~~hp~~~Ai~~~~~~~~----------------~~~~~~~~~g~gi~~~~~g~~~ 321 (536)
T TIGR01512 274 RLA---AAA------E-------QASSHPLARAIVDYARKRE----------------NVESVEEVPGEGVRAVVDGGEV 321 (536)
T ss_pred HHH---HHH------h-------ccCCCcHHHHHHHHHHhcC----------------CCcceEEecCCeEEEEECCeEE
Confidence 222 111 1 1277999999999987653 12221111 122222223322
Q ss_pred EEEEcCchHHHHHhcccccccCCeEeeCCHHHHHHHHHHHHHHHHhccceeeEEEEEcCCCCCCCCCCCCCcceeeeeec
Q 003740 577 RVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVG 656 (799)
Q Consensus 577 ~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~~~~~~~~~~~~~~~lg~~~ 656 (799)
. .|+++.+... + + ..+..+|.+++.++ .|..++|.+.
T Consensus 322 ~---ig~~~~~~~~--------~----~------------~~~~~~~~~~~~v~----------------~~~~~~g~i~ 358 (536)
T TIGR01512 322 R---IGNPRSLEAA--------V----G------------ARPESAGKTIVHVA----------------RDGTYLGYIL 358 (536)
T ss_pred E---EcCHHHHhhc--------C----C------------cchhhCCCeEEEEE----------------ECCEEEEEEE
Confidence 2 3665433211 1 0 03455677766654 4678999999
Q ss_pred ccCCCcccHHHHHHHHHhCCC-EEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCc
Q 003740 657 IKDPMRPGVKESVAICRSAGI-TVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 735 (799)
Q Consensus 657 ~~D~~R~~v~~aI~~l~~aGI-~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP 735 (799)
++|++|||++++|+.|+++|+ ++.|+|||+..+|.++++++||.. +|++..|
T Consensus 359 ~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~---------------------------~f~~~~p 411 (536)
T TIGR01512 359 LSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDE---------------------------VHAELLP 411 (536)
T ss_pred EeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh---------------------------hhhccCc
Confidence 999999999999999999999 999999999999999999999965 8899999
Q ss_pred ccHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC-----ChHhHHHhh
Q 003740 736 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF-----NFSSRKTYI 798 (799)
Q Consensus 736 ~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi-----nf~si~~~i 798 (799)
++|..+++.++++ ++.|+|+|||.||+||+++||+|++||.+|++.++++||+ +++.+.+.+
T Consensus 412 ~~K~~~i~~l~~~-~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l~~~i 478 (536)
T TIGR01512 412 EDKLEIVKELREK-YGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAI 478 (536)
T ss_pred HHHHHHHHHHHhc-CCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHHHHHH
Confidence 9999999999999 9999999999999999999999999997799999999999 888887654
No 30
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.6e-71 Score=605.20 Aligned_cols=587 Identities=25% Similarity=0.334 Sum_probs=447.6
Q ss_pred CCCCccHHHHHHHHHhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHH
Q 003740 134 DGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLV 213 (799)
Q Consensus 134 ~Gl~~~~~~~~~r~~~~g~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~~~~~d~~~i~~~illv 213 (799)
.|.. ++.++..-...||.|.+..+ ..+|-.++.+....|++.+..+|..+++.- +.||.+. +.++++
T Consensus 161 ~G~~-~~~~i~~a~~~~G~N~fdi~-vPtF~eLFkE~A~aPfFVFQVFcvgLWCLD--------eyWYySl---FtLfMl 227 (1160)
T KOG0209|consen 161 TGHE-EESEIKLAKHKYGKNKFDIV-VPTFSELFKEHAVAPFFVFQVFCVGLWCLD--------EYWYYSL---FTLFML 227 (1160)
T ss_pred cCcc-hHHHHHHHHHHhcCCccccC-CccHHHHHHHhccCceeeHhHHhHHHHHhH--------HHHHHHH---HHHHHH
Confidence 5676 44456666667999999654 567999999988888888877777665542 2577664 445555
Q ss_pred HHHHHHHHHHHHHHHHHHhhh-hcCceeEEEeCCeEEEEecCCCCcccEEEecC---CCeecccEEEEeeceeEEecccc
Q 003740 214 VFVTATSDYKQSLQFKDLDRE-KKKITVQVARNGFRRKISIYDLLPGDIVHLCM---GDQVPADGLFVSGFSVLINESSL 289 (799)
Q Consensus 214 ~~~~~~~~~~~~~~~~~l~~~-~~~~~v~V~R~g~~~~i~~~~LvvGDiv~l~~---Gd~vPaDg~ll~g~~l~vDeS~l 289 (799)
+.+++..-+++.+....+.+. ..+..+.|+|+++|+.+...||.|||+|.|.. ...||||.+++.|+ |.|||+||
T Consensus 228 i~fE~tlV~Qrm~~lse~R~Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~Gs-ciVnEaML 306 (1160)
T KOG0209|consen 228 IAFEATLVKQRMRTLSEFRTMGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLRGS-CIVNEAML 306 (1160)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCceEEEEEecCcceeccccccCCCceEEeccCcccCcCCceEEEEecc-eeechhhh
Confidence 666776667777776666653 35678999999999999999999999999977 56899999999996 79999999
Q ss_pred cCCCCccccCC----------------CCCEEEccceee-------------eceEEEEEEEEcccchhHHHHHhhcCCC
Q 003740 290 TGESEPVNVNA----------------LNPFLLSGTKVQ-------------NGSCKMLVTTVGMRTQWGKLMATLSEGG 340 (799)
Q Consensus 290 TGEs~pv~k~~----------------~~~~v~sGt~v~-------------~G~~~~~V~~vG~~T~~g~i~~~~~~~~ 340 (799)
||||.|..|.+ +..++|.||+++ +|.+.+.|++||.+|..|++++.+....
T Consensus 307 tGESvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTSQGkLvRtilf~a 386 (1160)
T KOG0209|consen 307 TGESVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETSQGKLVRTILFSA 386 (1160)
T ss_pred cCCCccccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeEEEEEeccccccCCceeeeEEecc
Confidence 99999999841 234789999996 6889999999999999999999988765
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcchHHHHHHHHHHHHHHHHHhCCchhHHH
Q 003740 341 DDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420 (799)
Q Consensus 341 ~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvva~P~~Lplav 420 (799)
++-|.-. +=+.+| ++.+++|.+....|.|..-.... ..+-...|.-++-|+...+|.-||+-+
T Consensus 387 ervTaNn----~Etf~F-----ILFLlVFAiaAa~Yvwv~Gskd~--------~RsrYKL~LeC~LIlTSVvPpELPmEL 449 (1160)
T KOG0209|consen 387 ERVTANN----RETFIF-----ILFLLVFAIAAAGYVWVEGSKDP--------TRSRYKLFLECTLILTSVVPPELPMEL 449 (1160)
T ss_pred eeeeecc----HHHHHH-----HHHHHHHHHHhhheEEEecccCc--------chhhhheeeeeeEEEeccCCCCCchhh
Confidence 5534221 112222 23334444444444332211110 012224455567777788999999999
Q ss_pred HHHHHHHHHHHhhhhhhhcccchhhccCCceeEeecCCCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHH
Q 003740 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKL 500 (799)
Q Consensus 421 ~l~l~~~~~~l~~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (799)
+++.-.+...|.|.+++|..+-.+.-.|++|..|||||||||+..|.|..+--.... .......+..+.+....
T Consensus 450 SmAVNsSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~------~~~~~~~s~~p~~t~~v 523 (1160)
T KOG0209|consen 450 SMAVNSSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSAD------EGALTPASKAPNETVLV 523 (1160)
T ss_pred hHHHHHHHHHHHHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCC------cccccchhhCCchHHHH
Confidence 999999999999999999999999999999999999999999999999887542211 00011122333344443
Q ss_pred HHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHc---CC---ChHHHhhhcceEEEecCCCCCceEEEEEEeCC-
Q 003740 501 LLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLL---GG---DFQAERQASKIVKVEPFNSVKKQMGVVIELPE- 573 (799)
Q Consensus 501 l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~~~~~---g~---~~~~~~~~~~i~~~~~F~s~~k~~~vv~~~~~- 573 (799)
+ +.|++-... + + ...|+|.|+|.+++.... +. ..+..-+..+|.+.+.|+|.-|||+++....+
T Consensus 524 l----AscHsLv~l-e-~---~lVGDPlEKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~ 594 (1160)
T KOG0209|consen 524 L----ASCHSLVLL-E-D---KLVGDPLEKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGP 594 (1160)
T ss_pred H----HHHHHHHHh-c-C---cccCChHHHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccC
Confidence 3 233321111 1 1 269999999999875211 10 00111124678899999999999999987643
Q ss_pred ---CcEEEEEcCchHHHHHhcccccccCCeEeeCCHHHHHHHHHHHHHHHHhccceeeEEEEEcCCC-----CCCCCCCC
Q 003740 574 ---GGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNE-----FSADAPIP 645 (799)
Q Consensus 574 ---~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~-----~~~~~~~~ 645 (799)
..+.+.+|||||.|-.+-. +....+++...+|+.+|.||+|++||+++.- .+.+++..
T Consensus 595 g~s~k~~~aVKGAPEvi~~ml~--------------dvP~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~q~rd~~Re~v 660 (1160)
T KOG0209|consen 595 GSSEKYFVAVKGAPEVIQEMLR--------------DVPKDYDEIYKRYTRQGSRVLALGYKPLGDMMVSQVRDLKREDV 660 (1160)
T ss_pred CCceEEEEEecCCHHHHHHHHH--------------hCchhHHHHHHHHhhccceEEEEecccccccchhhhhhhhhhhh
Confidence 2577889999999977644 2335678889999999999999999999842 12345678
Q ss_pred CCcceeeeeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC----------------------
Q 003740 646 TEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN---------------------- 703 (799)
Q Consensus 646 ~~~~~~lg~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~---------------------- 703 (799)
|.+|+|.|++.|.-|+|||++++|+.|++++.+|+|+||||+.||.++|+++||....
T Consensus 661 EsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~ 740 (1160)
T KOG0209|consen 661 ESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDG 740 (1160)
T ss_pred hhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCC
Confidence 9999999999999999999999999999999999999999999999999999997531
Q ss_pred -------------------ceeecchhhhccCH-HHHhhhcCCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCH
Q 003740 704 -------------------GIAIEGPEFREKSD-EELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDA 763 (799)
Q Consensus 704 -------------------~~~~~g~~~~~~~~-~~~~~~~~~~~v~ar~sP~dK~~lV~~Lq~~~G~vVa~~GDG~NDa 763 (799)
+++++|+.+..+.. +.+.++++++.||||++|.||..++..|++. |++++|||||+||.
T Consensus 741 t~~lp~~p~~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~~-Gy~TLMCGDGTNDV 819 (1160)
T KOG0209|consen 741 TIVLPLKPGKKKTLLAETHDLCITGSALDHLQATDQLRRLIPHVWVFARVAPKQKEFIITTLKKL-GYVTLMCGDGTNDV 819 (1160)
T ss_pred ceeecCCCCccchhhhhhhhhhcchhHHHHHhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHhc-CeEEEEecCCCcch
Confidence 15667777776543 4678889999999999999999999999999 99999999999999
Q ss_pred HhhhcCCeeeecCCCCCHH
Q 003740 764 PALHEADIGLAMGIAGTEV 782 (799)
Q Consensus 764 pAL~~AdVGiamgi~gtev 782 (799)
.|||+||||||+- ++++-
T Consensus 820 GALK~AhVGVALL-~~~~e 837 (1160)
T KOG0209|consen 820 GALKQAHVGVALL-NNPEE 837 (1160)
T ss_pred hhhhhcccceehh-cCChh
Confidence 9999999999998 66663
No 31
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=100.00 E-value=1e-66 Score=613.81 Aligned_cols=627 Identities=24% Similarity=0.334 Sum_probs=485.0
Q ss_pred HHHhcCCCccCCCCCcc--H-HHHHHHHHhhHHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHHHHHHHHHH
Q 003740 146 RKEIYGINKFTESPARG--F-WVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDY 222 (799)
Q Consensus 146 r~~~~g~N~~~~~~~~~--f-~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~~~~~d~~~i~~~illv~~~~~~~~~ 222 (799)
+...|-.|.+...+... | -+.+|+||+...++.+++.+++++++ +.+ .++| ..++++++++.++++++.
T Consensus 28 ~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip-~~~----~~~~---~~~~pl~~vl~~t~iKd~ 99 (1151)
T KOG0206|consen 28 PQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIP-LSP----FNPY---TTLVPLLFVLGITAIKDA 99 (1151)
T ss_pred hhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCc-ccc----cCcc---ceeeceeeeehHHHHHHH
Confidence 34478889888765433 3 47899999999999999999999987 532 2333 345677888889999999
Q ss_pred HHHHHHHHHhhhhcCceeEEEeCCe-EEEEecCCCCcccEEEecCCCeecccEEEEeece----eEEecccccCCCCccc
Q 003740 223 KQSLQFKDLDREKKKITVQVARNGF-RRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFS----VLINESSLTGESEPVN 297 (799)
Q Consensus 223 ~~~~~~~~l~~~~~~~~v~V~R~g~-~~~i~~~~LvvGDiv~l~~Gd~vPaDg~ll~g~~----l~vDeS~lTGEs~pv~ 297 (799)
.+...+.+.+++.++.++.|.|++. ..+..|++|+|||+|.+..++.+|||.++++++. |+|+++.|+||+....
T Consensus 100 ~eD~rR~~~D~~iN~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGEtnLK~ 179 (1151)
T KOG0206|consen 100 IEDYRRHKQDKEVNNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGETNLKV 179 (1151)
T ss_pred HhhhhhhhccHHhhcceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCccccce
Confidence 9999999999999999999999644 8999999999999999999999999999999875 9999999999998876
Q ss_pred cC----------------------------------------------CCCCEEEccceeeec-eEEEEEEEEcccchhH
Q 003740 298 VN----------------------------------------------ALNPFLLSGTKVQNG-SCKMLVTTVGMRTQWG 330 (799)
Q Consensus 298 k~----------------------------------------------~~~~~v~sGt~v~~G-~~~~~V~~vG~~T~~g 330 (799)
|. ..++.++.|+++.+. .+.+.|+.+|.+|
T Consensus 180 k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dt--- 256 (1151)
T KOG0206|consen 180 KQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDT--- 256 (1151)
T ss_pred eeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCCcc---
Confidence 61 012357888888885 6899999999999
Q ss_pred HHHHhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCC-cccc-CCc-chHHHHHHHHHHHHH
Q 003740 331 KLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGT-HWTW-SGD-DALEILEFFAIAVTI 407 (799)
Q Consensus 331 ~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~-~~~~-~~~-~~~~~~~~~~~av~i 407 (799)
|++..-..+..+++++++.+|.....+..+.++++++..+... .+........ .+++ ... ........|+.++.+
T Consensus 257 K~~~n~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~~il 334 (1151)
T KOG0206|consen 257 KLMQNSGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFA--IWTRQDGRHNGEWWYLSPSEAAYAGFVHFLTFIIL 334 (1151)
T ss_pred hHHHhcCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhh--eeeeecccccCchhhhcCchHHHHHHHHHHHHHhh
Confidence 5555666688888999999988766666555555544433321 1111111111 1222 222 112344566777788
Q ss_pred HHHHhCCchhHHHHHHHHHHHHHHh----------hhhhhhcccchhhccCCceeEeecCCCccccCceEEEEEEEcCee
Q 003740 408 VVVAVPEGLPLAVTLSLAFAMKKMM----------NDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEI 477 (799)
Q Consensus 408 lvva~P~~Lplav~l~l~~~~~~l~----------~~~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~ 477 (799)
+...+|..|...+.+.-.+...-+. ...+.+|..+.-|.||++++|.+|||||||+|.|++.++.+.+..
T Consensus 335 ~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~ 414 (1151)
T KOG0206|consen 335 YQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTS 414 (1151)
T ss_pred hhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcc
Confidence 8889999999988887766654333 235778999999999999999999999999999999999998876
Q ss_pred eeecCCCC----------------------CC------CCCCCCChhHHHHHHHHHHhcCCceEEecCC--CceEEcCCc
Q 003740 478 KEVDNSKG----------------------TP------AFGSSIPASASKLLLQSIFNNTGGEVVIGEG--NKTEILGTP 527 (799)
Q Consensus 478 ~~~~~~~~----------------------~~------~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~--~~~~~~g~p 527 (799)
|....+.. .+ ...+.........+..++++|++...+.+++ ...+...+|
T Consensus 415 yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SP 494 (1151)
T KOG0206|consen 415 YGRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESP 494 (1151)
T ss_pred cccCCChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCC
Confidence 64332110 00 0011112334445667888888877776333 245668999
Q ss_pred hHHHHHHHHHHcCCChHH------------HhhhcceEEEecCCCCCceEEEEEEeCCCcEEEEEcCchHHHHHhccccc
Q 003740 528 TETAILEFGLLLGGDFQA------------ERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFL 595 (799)
Q Consensus 528 ~e~All~~~~~~g~~~~~------------~~~~~~i~~~~~F~s~~k~~~vv~~~~~~~~~~~~KGa~e~il~~c~~~~ 595 (799)
.|.|++..|+..|..+.. ....++++++.+|+|.||||||+++.+++.+.++||||..+|.++++.
T Consensus 495 DE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~-- 572 (1151)
T KOG0206|consen 495 DEAALVEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSK-- 572 (1151)
T ss_pred cHHHHHHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhh--
Confidence 999999999999876422 134789999999999999999999999999999999999999999874
Q ss_pred ccCCeEeeCCHHHHHHHHHHHHHHHHhccceeeEEEEEcCCCC---------------C-------CCCCCCCCcceeee
Q 003740 596 NSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEF---------------S-------ADAPIPTEGYTCIG 653 (799)
Q Consensus 596 ~~~g~~~~l~~~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~~---------------~-------~~~~~~~~~~~~lg 653 (799)
-.+..++.-.++++.||.+|+||+|+|||++++++ . +..+.+|+||+++|
T Consensus 573 --------~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLG 644 (1151)
T KOG0206|consen 573 --------NGEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLG 644 (1151)
T ss_pred --------cchHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhc
Confidence 23455666778999999999999999999998651 0 01145689999999
Q ss_pred eecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCc-----------------------------
Q 003740 654 IVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG----------------------------- 704 (799)
Q Consensus 654 ~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~----------------------------- 704 (799)
..+++|++++||+++|+.|++||||+||+|||..+||..||..|+++.++.
T Consensus 645 ATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~ 724 (1151)
T KOG0206|consen 645 ATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKETLLRK 724 (1151)
T ss_pred ceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999987532
Q ss_pred ------------------eeecchhhhccCHHH----Hhhhc--CCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCc
Q 003740 705 ------------------IAIEGPEFREKSDEE----LSKLI--PKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGT 760 (799)
Q Consensus 705 ------------------~~~~g~~~~~~~~~~----~~~~~--~~~~v~ar~sP~dK~~lV~~Lq~~~G~vVa~~GDG~ 760 (799)
+|++|+.+....+.+ +.++. ++..++||+||.||..+|+..++..+.+++.+|||.
T Consensus 725 ~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGA 804 (1151)
T KOG0206|consen 725 FTEELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGA 804 (1151)
T ss_pred hhHHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCC
Confidence 344455444332221 22222 567799999999999999999876799999999999
Q ss_pred cCHHhhhcCCeeeecCCCCCHH--HHHhcCC---ChHhHHHh
Q 003740 761 NDAPALHEADIGLAMGIAGTEV--ELECCCF---NFSSRKTY 797 (799)
Q Consensus 761 NDapAL~~AdVGiamgi~gtev--ak~aaDi---nf~si~~~ 797 (799)
||.+|+++||||| ||+|.|. |..+||+ -|.-+-+.
T Consensus 805 NDVsMIQ~AhVGV--GIsG~EGmQAvmsSD~AIaqFrfL~rL 844 (1151)
T KOG0206|consen 805 NDVSMIQEAHVGV--GISGQEGMQAVMSSDFAIAQFRFLERL 844 (1151)
T ss_pred ccchheeeCCcCe--eeccchhhhhhhcccchHHHHHHHhhh
Confidence 9999999999999 8888887 8888998 55544443
No 32
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-66 Score=559.16 Aligned_cols=605 Identities=22% Similarity=0.329 Sum_probs=456.5
Q ss_pred HHHhcCCCccCCCCCc--cH-HHHHHHHHhhHHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHHHHHHHHHH
Q 003740 146 RKEIYGINKFTESPAR--GF-WVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDY 222 (799)
Q Consensus 146 r~~~~g~N~~~~~~~~--~f-~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~~~~~d~~~i~~~illv~~~~~~~~~ 222 (799)
++.+|-+|.+...+.. +| ...++++|+...+.++++.++..++..+.. |....|+ .++.++.+++.+.+.
T Consensus 75 ~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~i-g~l~ty~------~pl~fvl~itl~kea 147 (1051)
T KOG0210|consen 75 RRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKI-GYLSTYW------GPLGFVLTITLIKEA 147 (1051)
T ss_pred ccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchhee-cchhhhh------HHHHHHHHHHHHHHH
Confidence 4467888888766533 33 456778888888888888888777766543 3322222 233334444555566
Q ss_pred HHHHHHHHHhhhhcCceeEEE-eCCeEEEEecCCCCcccEEEecCCCeecccEEEEeec----eeEEecccccCCCCccc
Q 003740 223 KQSLQFKDLDREKKKITVQVA-RNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGF----SVLINESSLTGESEPVN 297 (799)
Q Consensus 223 ~~~~~~~~l~~~~~~~~v~V~-R~g~~~~i~~~~LvvGDiv~l~~Gd~vPaDg~ll~g~----~l~vDeS~lTGEs~pv~ 297 (799)
.++.+++.-+++.++...+++ |+|.... ++++|.|||+|.+..+++||||.+++..+ ++.|.+-.|+||++...
T Consensus 148 vdd~~r~~rd~~~Nse~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDGETDWKL 226 (1051)
T KOG0210|consen 148 VDDLKRRRRDRELNSEKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDGETDWKL 226 (1051)
T ss_pred HHHHHHHHhhhhhhhhhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCCccccee
Confidence 555555555555555556666 7776555 99999999999999999999999999865 38999999999999766
Q ss_pred cC----------------------------------------------CCCCEEEccceeeeceEEEEEEEEcccchhHH
Q 003740 298 VN----------------------------------------------ALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGK 331 (799)
Q Consensus 298 k~----------------------------------------------~~~~~v~sGt~v~~G~~~~~V~~vG~~T~~g~ 331 (799)
|- .-++.++++|.+.+|.+.+.|++||.+|.
T Consensus 227 rl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvVvYTG~dtR--- 303 (1051)
T KOG0210|consen 227 RLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVVVYTGRDTR--- 303 (1051)
T ss_pred eccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEEEEecccHH---
Confidence 50 01357999999999999999999999994
Q ss_pred HHHhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcchHHHHHHHHHHHHHHHHH
Q 003740 332 LMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVA 411 (799)
Q Consensus 332 i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvva 411 (799)
-+.+-..+..+---++..+|.+.+++....++++++.... .|... .|..+++..+.++-..
T Consensus 304 svMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~-----------~g~~~--------~wyi~~~RfllLFS~I 364 (1051)
T KOG0210|consen 304 SVMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAM-----------KGFGS--------DWYIYIIRFLLLFSSI 364 (1051)
T ss_pred HHhccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHh-----------hcCCC--------chHHHHHHHHHHHhhh
Confidence 3334445555556677788999888877766666543221 11111 2334556666677777
Q ss_pred hCCchhHHHHHHHHHHHHHHhhh----hhhhcccchhhccCCceeEeecCCCccccCceEEEEEEEcCeeeeecCCC---
Q 003740 412 VPEGLPLAVTLSLAFAMKKMMND----KALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSK--- 484 (799)
Q Consensus 412 ~P~~Lplav~l~l~~~~~~l~~~----~ilvr~~~a~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~--- 484 (799)
+|..|-.-+.++..+-...+.++ |.+||....-|.||++.++.+|||||||+|.|.+.++..+.-.+..+...
T Consensus 365 IPISLRvnlDmaK~~ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV~ 444 (1051)
T KOG0210|consen 365 IPISLRVNLDMAKIVYSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEVS 444 (1051)
T ss_pred ceeEEEEehhHHHhhHhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHHH
Confidence 99999999999988888888876 66799999999999999999999999999999999999875443321100
Q ss_pred ------------CCC----CCCCCCChhHHHHHHHHHHhcCCceEEecCCC-ceEEcCCchHHHHHHHHHHcCCChHH--
Q 003740 485 ------------GTP----AFGSSIPASASKLLLQSIFNNTGGEVVIGEGN-KTEILGTPTETAILEFGLLLGGDFQA-- 545 (799)
Q Consensus 485 ------------~~~----~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~-~~~~~g~p~e~All~~~~~~g~~~~~-- 545 (799)
... .....++..+.. +.+++++|++.....+++| ..+...+|.|.||++|....|+..-.
T Consensus 445 ~~i~s~~~~~~~~~~~~~~~~k~~~s~rv~~-~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd 523 (1051)
T KOG0210|consen 445 QHIQSLYTPGRNKGKGALSRVKKDMSARVRN-AVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLKLAKRD 523 (1051)
T ss_pred HHHHHhhCCCcccccccchhhcCcccHHHHH-HHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecceEEeecc
Confidence 000 011223333333 3467777777766666654 44668899999999999877764211
Q ss_pred -----------HhhhcceEEEecCCCCCceEEEEEEeC-CCcEEEEEcCchHHHHHhcccccccCCeEeeCCHHHHHHHH
Q 003740 546 -----------ERQASKIVKVEPFNSVKKQMGVVIELP-EGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLN 613 (799)
Q Consensus 546 -----------~~~~~~i~~~~~F~s~~k~~~vv~~~~-~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~ 613 (799)
...+++|+.++||+|+.||||++++.+ .+.+..|.|||.-++-+.- +| .+.++
T Consensus 524 ~~~itL~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iV-q~--------------NdWle 588 (1051)
T KOG0210|consen 524 RHAITLRVPLDDELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIV-QY--------------NDWLE 588 (1051)
T ss_pred cceEEEecCCCcceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhccc-cc--------------chhhh
Confidence 223789999999999999999999976 5789999999965543332 21 13567
Q ss_pred HHHHHHHHhccceeeEEEEEcCCCCCC--------------C---------CCCCCCcceeeeeecccCCCcccHHHHHH
Q 003740 614 ETIEKFASEALRTLCLACMEIGNEFSA--------------D---------APIPTEGYTCIGIVGIKDPMRPGVKESVA 670 (799)
Q Consensus 614 ~~~~~~a~~g~r~l~~a~~~~~~~~~~--------------~---------~~~~~~~~~~lg~~~~~D~~R~~v~~aI~ 670 (799)
+...+||.+|+|++.+|.|.++.++-+ + ...+|.|+.++|+.|.+|.++++|+.+++
T Consensus 589 EE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLE 668 (1051)
T KOG0210|consen 589 EECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLE 668 (1051)
T ss_pred hhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHH
Confidence 778899999999999999999865100 0 12568999999999999999999999999
Q ss_pred HHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCc----------------------------eeecchhhhc---cCHHH
Q 003740 671 ICRSAGITVRMVTGDNINTAKAIARECGILTDNG----------------------------IAIEGPEFRE---KSDEE 719 (799)
Q Consensus 671 ~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~----------------------------~~~~g~~~~~---~~~~~ 719 (799)
.||+|||+|||+|||..+||..||+..++...+. ++++|+.+.- .-++|
T Consensus 669 lLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~E 748 (1051)
T KOG0210|consen 669 LLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDE 748 (1051)
T ss_pred HHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHH
Confidence 9999999999999999999999999999986542 7788877653 34567
Q ss_pred Hhhhc--CCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCCCHH--HHHhcCC---ChH
Q 003740 720 LSKLI--PKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEV--ELECCCF---NFS 792 (799)
Q Consensus 720 ~~~~~--~~~~v~ar~sP~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~gtev--ak~aaDi---nf~ 792 (799)
+.++. ....|+|||+|.||+++++.+|++.|..|+.+|||-||..|+++||+|| ||-|.|. |.-|||. .|+
T Consensus 749 f~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~Gi--GI~gkEGkQASLAADfSItqF~ 826 (1051)
T KOG0210|consen 749 FIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGI--GIVGKEGKQASLAADFSITQFS 826 (1051)
T ss_pred HHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccce--eeecccccccchhccccHHHHH
Confidence 76655 3456999999999999999999988999999999999999999999999 8888887 7778898 787
Q ss_pred hHHHhh
Q 003740 793 SRKTYI 798 (799)
Q Consensus 793 si~~~i 798 (799)
-+-+.+
T Consensus 827 Hv~rLL 832 (1051)
T KOG0210|consen 827 HVSRLL 832 (1051)
T ss_pred HHHHHh
Confidence 776655
No 33
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-63 Score=525.85 Aligned_cols=473 Identities=27% Similarity=0.396 Sum_probs=371.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhcCceeEEEeC-CeEEEEecCCCCcccEEEecCCCeecccEEEEeeceeEEeccc
Q 003740 210 ILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARN-GFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESS 288 (799)
Q Consensus 210 illv~~~~~~~~~~~~~~~~~l~~~~~~~~v~V~R~-g~~~~i~~~~LvvGDiv~l~~Gd~vPaDg~ll~g~~l~vDeS~ 288 (799)
+++..+.+++.+.+-..|...|.+......++++++ |..+.|++.+|..||+|.|..||.||+||.+++|.. +||||.
T Consensus 76 VlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG~a-sVdESA 154 (681)
T COG2216 76 VLFANFAEAVAEGRGKAQADSLRKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVA-SVDESA 154 (681)
T ss_pred HHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHhcCCCCeeeccccccccCCEEEEecCCCccCCCeEEeeee-ecchhh
Confidence 333334455566665666666666555556777775 899999999999999999999999999999999986 999999
Q ss_pred ccCCCCccccCCCCCE--EEccceeeeceEEEEEEEEcccchhHHHHHhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHH
Q 003740 289 LTGESEPVNVNALNPF--LLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAV 366 (799)
Q Consensus 289 lTGEs~pv~k~~~~~~--v~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~ 366 (799)
+||||.||-|..+..+ |-.||.+++.++++++++...+|.+.++..+++.++.+|||-+.-++ +...++.+..
T Consensus 155 ITGESaPViresGgD~ssVtGgT~v~SD~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~-----iLL~~LTliF 229 (681)
T COG2216 155 ITGESAPVIRESGGDFSSVTGGTRVLSDWLKIRITANPGETFLDRMIALVEGAERQKTPNEIALT-----ILLSGLTLIF 229 (681)
T ss_pred ccCCCcceeeccCCCcccccCCcEEeeeeEEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHH-----HHHHHHHHHH
Confidence 9999999999877433 89999999999999999999999999999999999999999665443 3333332222
Q ss_pred HHHHHHHHHHhhhhccCCCccccCCcchHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHhhhhhhhcccchhhc
Q 003740 367 VTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACET 446 (799)
Q Consensus 367 l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvva~P~~Lplav~l~l~~~~~~l~~~~ilvr~~~a~E~ 446 (799)
++.++. .|.+..+..+. . -.+..-++++|+.+|-.++-.++..=..+|.|+.+.|++-++..|+|.
T Consensus 230 L~~~~T--l~p~a~y~~g~-------~-----~~i~~LiALlV~LIPTTIGgLLsAIGIAGMdRv~~~NViA~SGRAVEa 295 (681)
T COG2216 230 LLAVAT--LYPFAIYSGGG-------A-----ASVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVTQFNVIATSGRAVEA 295 (681)
T ss_pred HHHHHh--hhhHHHHcCCC-------C-----cCHHHHHHHHHHHhcccHHHHHHHhhhhhhhHhhhhceeecCcchhhh
Confidence 211111 11111111111 0 113456788999999988877777777899999999999999999999
Q ss_pred cCCceeEeecCCCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceEEcCC
Q 003740 447 MGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGT 526 (799)
Q Consensus 447 lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~ 526 (799)
.|.+|++..|||||+|.|+-.-.++++.+... ..+ +..+..+++ +. -..
T Consensus 296 aGDvdtliLDKTGTIT~GnR~A~~f~p~~gv~------------------~~~-la~aa~lsS---l~---------DeT 344 (681)
T COG2216 296 AGDVDTLLLDKTGTITLGNRQASEFIPVPGVS------------------EEE-LADAAQLAS---LA---------DET 344 (681)
T ss_pred cCCccEEEecccCceeecchhhhheecCCCCC------------------HHH-HHHHHHHhh---hc---------cCC
Confidence 99999999999999999987777776654431 111 222222221 21 336
Q ss_pred chHHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeCCCcEEEEEcCchHHHHHhcccccccCCeEeeCCH
Q 003740 527 PTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNE 606 (799)
Q Consensus 527 p~e~All~~~~~~g~~~~~~~~~~~i~~~~~F~s~~k~~~vv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~ 606 (799)
|..+.++.++++++.+.+...... -....||+.+.+++++-. +++ +-.-||+.+.+....+ ..+...|
T Consensus 345 pEGrSIV~LA~~~~~~~~~~~~~~-~~~fvpFtA~TRmSGvd~--~~~--~~irKGA~dai~~~v~----~~~g~~p--- 412 (681)
T COG2216 345 PEGRSIVELAKKLGIELREDDLQS-HAEFVPFTAQTRMSGVDL--PGG--REIRKGAVDAIRRYVR----ERGGHIP--- 412 (681)
T ss_pred CCcccHHHHHHHhccCCCcccccc-cceeeecceecccccccC--CCC--ceeecccHHHHHHHHH----hcCCCCC---
Confidence 888999999998876543322111 346789999888888743 333 5567999999987654 2232222
Q ss_pred HHHHHHHHHHHHHHHhccceeeEEEEEcCCCCCCCCCCCCCcceeeeeecccCCCcccHHHHHHHHHhCCCEEEEEcCCC
Q 003740 607 AAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDN 686 (799)
Q Consensus 607 ~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~ 686 (799)
..++...++-++.|-..++++ .|..++|++.++|-++||.+|=+.+||+.||+.+|+||||
T Consensus 413 ---~~l~~~~~~vs~~GGTPL~V~----------------~~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN 473 (681)
T COG2216 413 ---EDLDAAVDEVSRLGGTPLVVV----------------ENGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDN 473 (681)
T ss_pred ---HHHHHHHHHHHhcCCCceEEE----------------ECCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCC
Confidence 457777888899998888886 5778999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHhh
Q 003740 687 INTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPAL 766 (799)
Q Consensus 687 ~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL 766 (799)
+.||.+||+|.|++. ..|.++|+||..+|+.-|.+ |+.|||||||+||||||
T Consensus 474 ~~TAa~IA~EAGVDd---------------------------fiAeatPEdK~~~I~~eQ~~-grlVAMtGDGTNDAPAL 525 (681)
T COG2216 474 PLTAAAIAAEAGVDD---------------------------FIAEATPEDKLALIRQEQAE-GRLVAMTGDGTNDAPAL 525 (681)
T ss_pred HHHHHHHHHHhCchh---------------------------hhhcCChHHHHHHHHHHHhc-CcEEEEcCCCCCcchhh
Confidence 999999999999976 88999999999999999999 99999999999999999
Q ss_pred hcCCeeeecCCCCCHHHHHhcCC-ChHh
Q 003740 767 HEADIGLAMGIAGTEVELECCCF-NFSS 793 (799)
Q Consensus 767 ~~AdVGiamgi~gtevak~aaDi-nf~s 793 (799)
++||||+||. +||..||||+.+ |..|
T Consensus 526 AqAdVg~AMN-sGTqAAkEAaNMVDLDS 552 (681)
T COG2216 526 AQADVGVAMN-SGTQAAKEAANMVDLDS 552 (681)
T ss_pred hhcchhhhhc-cccHHHHHhhcccccCC
Confidence 9999999999 999999999998 4433
No 34
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=100.00 E-value=4.7e-35 Score=303.15 Aligned_cols=222 Identities=33% Similarity=0.553 Sum_probs=188.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCceeEEEeCCeEEEEecCCCCcccEEEecCCCeecccEEEEe-eceeEEe
Q 003740 207 VMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVS-GFSVLIN 285 (799)
Q Consensus 207 ~~~illv~~~~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~i~~~~LvvGDiv~l~~Gd~vPaDg~ll~-g~~l~vD 285 (799)
++.+++..++..+.+++.++..+++.+...+..++|+|||+++++++.||+|||+|.|++||++||||++++ |. +.||
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g~-~~vd 81 (230)
T PF00122_consen 3 LFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESGS-AYVD 81 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESSE-EEEE
T ss_pred EEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCccceeccc-cccc
Confidence 444555566677777777777777776555545999999999999999999999999999999999999999 64 7999
Q ss_pred cccccCCCCccccC-----CCCCEEEccceeeeceEEEEEEEEcccchhHHHHHhhcCCCCCCChhHHHHHHHHHHHHHH
Q 003740 286 ESSLTGESEPVNVN-----ALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKI 360 (799)
Q Consensus 286 eS~lTGEs~pv~k~-----~~~~~v~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~ 360 (799)
||.+|||+.|+.|. . ++++|+||.+.+|++.++|++||.+|..|++.+.+.+....++++++.+++++.++.++
T Consensus 82 ~s~ltGes~pv~k~~~~~~~-~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (230)
T PF00122_consen 82 ESALTGESEPVKKTPLPLNP-GNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIII 160 (230)
T ss_dssp CHHHHSBSSEEEESSSCCCT-TTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccc-cchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhc
Confidence 99999999999998 5 45799999999999999999999999999999999888888899999999999999998
Q ss_pred HHHHHHHHHHHHHHHHhhhhccCCCccccCCcchHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHhhhhhhhcc
Q 003740 361 GLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRH 440 (799)
Q Consensus 361 ~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvva~P~~Lplav~l~l~~~~~~l~~~~ilvr~ 440 (799)
.+++++++++++++. . ...++...|..++++++++|||+||+++++++.+++++|.++|+++|+
T Consensus 161 ~~~~~~~~~~~~~~~------~----------~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v~~ 224 (230)
T PF00122_consen 161 ILAIAILVFIIWFFN------D----------SGISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRLAKNGIIVKN 224 (230)
T ss_dssp HHHHHHHHHHHCHTG------S----------TTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHTTEEESS
T ss_pred ccccchhhhccceec------c----------cccccccccccccceeeeecccceeehHHHHHHHHHHHHHHCCEEEeC
Confidence 888887776554321 0 011455778889999999999999999999999999999999999999
Q ss_pred cchhhc
Q 003740 441 LAACET 446 (799)
Q Consensus 441 ~~a~E~ 446 (799)
++++|+
T Consensus 225 ~~a~E~ 230 (230)
T PF00122_consen 225 LSALEA 230 (230)
T ss_dssp TTHHHH
T ss_pred cccccC
Confidence 999995
No 35
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.93 E-value=1.8e-25 Score=228.65 Aligned_cols=97 Identities=44% Similarity=0.717 Sum_probs=91.7
Q ss_pred cceeeeeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCc
Q 003740 648 GYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKI 727 (799)
Q Consensus 648 ~~~~lg~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 727 (799)
+..++|.+.+.||+||+++++|+.|+++|++++|+|||+..+|.++|+++||.. .
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~-------------------------~ 169 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD-------------------------S 169 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS-------------------------E
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc-------------------------c
Confidence 689999999999999999999999999999999999999999999999999943 2
Q ss_pred eEEEec--CcccH--HHHHHHHHHhCCCEEEEEcCCccCHHhhhcCC
Q 003740 728 QVMARS--SPMDK--HTLVKHLRTTLGEVVAVTGDGTNDAPALHEAD 770 (799)
Q Consensus 728 ~v~ar~--sP~dK--~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~Ad 770 (799)
.|+++. +|++| .++++.||.. ++.|+|+|||+||+|||++||
T Consensus 170 ~v~a~~~~kP~~k~~~~~i~~l~~~-~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 170 IVFARVIGKPEPKIFLRIIKELQVK-PGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp EEEESHETTTHHHHHHHHHHHHTCT-GGGEEEEESSGGHHHHHHHSS
T ss_pred cccccccccccchhHHHHHHHHhcC-CCEEEEEccCHHHHHHHHhCc
Confidence 399999 99999 9999999976 679999999999999999997
No 36
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=99.56 E-value=1.6e-14 Score=127.57 Aligned_cols=122 Identities=21% Similarity=0.298 Sum_probs=106.0
Q ss_pred eeeeeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceE
Q 003740 650 TCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQV 729 (799)
Q Consensus 650 ~~lg~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v 729 (799)
...+.++---.+=+++++.|++|++. ++|.+.|||...+....|+-.||..+. |
T Consensus 20 ~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~r-------------------------v 73 (152)
T COG4087 20 KVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVER-------------------------V 73 (152)
T ss_pred eEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCceee-------------------------e
Confidence 44566666677789999999999999 999999999999999999999997643 9
Q ss_pred EEecCcccHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCC--CCCHHHHHhcCC---ChHhHHHhh
Q 003740 730 MARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGI--AGTEVELECCCF---NFSSRKTYI 798 (799)
Q Consensus 730 ~ar~sP~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi--~gtevak~aaDi---nf~si~~~i 798 (799)
||...|+.|..+++.|++. +++|.|+|||.||.+||++||+||..=. ...+-+.++||+ |...++...
T Consensus 74 ~a~a~~e~K~~ii~eLkk~-~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~i~e~ldl~ 146 (152)
T COG4087 74 FAGADPEMKAKIIRELKKR-YEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKEIAEILDLL 146 (152)
T ss_pred ecccCHHHHHHHHHHhcCC-CcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhhHHHHHHHh
Confidence 9999999999999999988 9999999999999999999999976531 345667899999 777776653
No 37
>PF12515 CaATP_NAI: Ca2+-ATPase N terminal autoinhibitory domain; InterPro: IPR024750 This entry represents the N-terminal autoinhibitory calmodulin-binding domain characteristic of certain calcium-transporting ATPases []. This domain binds calmodulin in a calcium-dependent fashion and has a conserved RRFR sequence motif. There are two completely conserved residues (F and W) that may be functionally important.; GO: 0005516 calmodulin binding
Probab=99.55 E-value=1.9e-15 Score=108.94 Aligned_cols=46 Identities=63% Similarity=1.076 Sum_probs=43.5
Q ss_pred cccccCCCCCCCCCcHHHHHHHHHhhhcccccccccccccccchhhH
Q 003740 4 YLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFE 50 (799)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~r~f~~~~~~~~~~e 50 (799)
|+.++|+ +++||+|+|+++|||+|+++|+|++|||||+++|+|+.|
T Consensus 1 yl~~~Fd-i~~Kn~s~e~l~rWR~a~~lv~N~~RRFR~~~dL~k~~e 46 (47)
T PF12515_consen 1 YLDDNFD-IPAKNSSEEALRRWRQAVGLVKNARRRFRYTADLKKREE 46 (47)
T ss_pred CCccccC-CCCCCCCHHHHHHHHHHhHHhccccceeeecccHhhHhc
Confidence 6789998 999999999999999999999999999999999988875
No 38
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit
Probab=99.52 E-value=3.6e-14 Score=123.44 Aligned_cols=87 Identities=38% Similarity=0.604 Sum_probs=71.5
Q ss_pred hcCCceEEecCCCc-eEEcCCchHHHHHHHHHHc--CCChHHHhhhcceEEEecCCCCCceEEEEEEeCCCcEEEEEcCc
Q 003740 507 NNTGGEVVIGEGNK-TEILGTPTETAILEFGLLL--GGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGA 583 (799)
Q Consensus 507 ~~~~~~~~~~~~~~-~~~~g~p~e~All~~~~~~--g~~~~~~~~~~~i~~~~~F~s~~k~~~vv~~~~~~~~~~~~KGa 583 (799)
+|+++.+..+.+.. .+..|+|+|.||+.|+... +.+....+..+++++.+||+|++|+|+++++ .++.+.+++|||
T Consensus 2 LCn~a~~~~~~~~~~~~~~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~-~~~~~~~~~KGA 80 (91)
T PF13246_consen 2 LCNDAEIEYDDESKTEEIIGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR-NDGKYILYVKGA 80 (91)
T ss_pred CccccEeecCCCCccccccCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe-CCCEEEEEcCCC
Confidence 45566665544332 3489999999999999998 4567889999999999999999999999998 334577799999
Q ss_pred hHHHHHhcccc
Q 003740 584 SEIILAACDKF 594 (799)
Q Consensus 584 ~e~il~~c~~~ 594 (799)
||.||++|+++
T Consensus 81 ~e~il~~Ct~i 91 (91)
T PF13246_consen 81 PEVILDRCTHI 91 (91)
T ss_pred hHHHHHhcCCC
Confidence 99999999863
No 39
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.35 E-value=2.3e-10 Score=125.61 Aligned_cols=192 Identities=17% Similarity=0.269 Sum_probs=142.1
Q ss_pred CchHHHHHhcccccccCCeEeeCCHHHHHHHHHHHHHHHHhccceeeEEEEEcCCC------------------------
Q 003740 582 GASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNE------------------------ 637 (799)
Q Consensus 582 Ga~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~------------------------ 637 (799)
|-.+.+...|+.+++.. ...||+...++++.+....-.-.| .|++||||+..-.
T Consensus 698 g~ad~~~eACTdfWdGa-di~PlSg~dkkkV~DFY~RaclsG-~C~AfaYkP~~caLasqL~GKciEl~~~p~~SkI~T~ 775 (1354)
T KOG4383|consen 698 GFADFFEEACTDFWDGA-DIIPLSGRDKKKVKDFYLRACLSG-HCLAFAYKPCFCALASQLAGKCIELPLNPEHSKIETA 775 (1354)
T ss_pred cHHHHHHHHhhhhcCCc-eeeecCcchHHHHHHHHHHHhhcc-cchheecccHHHHHHHHhCCceEEeccCcccchhhhh
Confidence 56788899999999743 468999999999998888766666 5999999986311
Q ss_pred ---C-C--------C-----CC-----------CCCCCcceeeeeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHH
Q 003740 638 ---F-S--------A-----DA-----------PIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINT 689 (799)
Q Consensus 638 ---~-~--------~-----~~-----------~~~~~~~~~lg~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~t 689 (799)
+ + . ++ .....+.+|.|++..+.+.|++....|+.|-++.||.+..|-.+...
T Consensus 776 celp~sipikqnar~S~~e~Degige~l~~e~c~Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELk 855 (1354)
T KOG4383|consen 776 CELPHSIPIKQNARESFDEIDEGIGERLADEACDQAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELK 855 (1354)
T ss_pred ccCCCCCcchhhhhhhhhhhccccceeccHhHHHHHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHH
Confidence 0 0 0 00 01134678999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCccCCceeec------------------------------------chh---------------hhccCH-
Q 003740 690 AKAIARECGILTDNGIAIE------------------------------------GPE---------------FREKSD- 717 (799)
Q Consensus 690 A~aiA~~~GI~~~~~~~~~------------------------------------g~~---------------~~~~~~- 717 (799)
.+-.|.++||...+.-.++ ..+ |+.++.
T Consensus 856 SkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsd 935 (1354)
T KOG4383|consen 856 SKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSD 935 (1354)
T ss_pred HHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhhccCcchhHHHHHhhhcccccceeehhhcccCCccccccccc
Confidence 9999999999865431110 000 011100
Q ss_pred --------------HHHhhhcCC----------ceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCccC--HHhhhcCCe
Q 003740 718 --------------EELSKLIPK----------IQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTND--APALHEADI 771 (799)
Q Consensus 718 --------------~~~~~~~~~----------~~v~ar~sP~dK~~lV~~Lq~~~G~vVa~~GDG~ND--apAL~~AdV 771 (799)
..+.+.-|+ +-.|..++|+.--++|+.+|+. |+||+.+|...|- .-..-+|||
T Consensus 936 i~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTDcnpeamcEMIeIMQE~-GEVtcclGS~aN~rNSciflkadI 1014 (1354)
T KOG4383|consen 936 IAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTDCNPEAMCEMIEIMQEN-GEVTCCLGSCANARNSCIFLKADI 1014 (1354)
T ss_pred hhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccCCCHHHHHHHHHHHHHc-CcEEEEeccccccccceEEEccce
Confidence 000111111 2278899999999999999998 9999999999884 345678999
Q ss_pred eeecC
Q 003740 772 GLAMG 776 (799)
Q Consensus 772 Giamg 776 (799)
+||+-
T Consensus 1015 SialD 1019 (1354)
T KOG4383|consen 1015 SIALD 1019 (1354)
T ss_pred eEEec
Confidence 99874
No 40
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=99.11 E-value=3.6e-10 Score=113.98 Aligned_cols=121 Identities=19% Similarity=0.166 Sum_probs=91.9
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC--ceeecchhhhccCHHHHhhhcCCceEEEecCccc
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN--GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~d 737 (799)
+++|++++.|+.|++.| ++.++||-....+..+++++||..-- ...+.+.. .+... . -..|.+
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g-----------~~tG~-~--~~~~~~ 132 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSD-----------RVVGY-Q--LRQKDP 132 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCC-----------eeECe-e--ecCcch
Confidence 57999999999999975 99999999999999999999996321 11111100 00000 1 145789
Q ss_pred HHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcC-C----ChHhHHHhh
Q 003740 738 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCC-F----NFSSRKTYI 798 (799)
Q Consensus 738 K~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaD-i----nf~si~~~i 798 (799)
|...++.+++. |..+.++|||.||.||++.||+|+++. +.+..+++|| + +++.+.+.|
T Consensus 133 K~~~l~~l~~~-~~~~v~vGDs~nDl~ml~~Ag~~ia~~--ak~~~~~~~~~~~~~~~~~~~~~~~ 195 (203)
T TIGR02137 133 KRQSVIAFKSL-YYRVIAAGDSYNDTTMLSEAHAGILFH--APENVIREFPQFPAVHTYEDLKREF 195 (203)
T ss_pred HHHHHHHHHhh-CCCEEEEeCCHHHHHHHHhCCCCEEec--CCHHHHHhCCCCCcccCHHHHHHHH
Confidence 99999999877 878999999999999999999999995 5666555554 4 777777655
No 41
>PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A ....
Probab=99.06 E-value=3.4e-10 Score=93.24 Aligned_cols=68 Identities=25% Similarity=0.524 Sum_probs=63.8
Q ss_pred hhCCHHHHHHHhCCCccCCCCccHHHHHHHHHhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHH
Q 003740 117 VHGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVS 186 (799)
Q Consensus 117 ~~~~v~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~g~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is 186 (799)
+..+++++++.|+++...||+.++ +.+|++.||+|.++.++.+++|+.++++|++++.++|++++++|
T Consensus 2 ~~~~~~~v~~~l~t~~~~GLs~~e--v~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 2 HQLSVEEVLKRLNTSSSQGLSSEE--VEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp TTSSHHHHHHHHTTBTSSBBTHHH--HHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHCcCCCCCCCHHH--HHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 346799999999999999999877 99999999999999999999999999999999999999999986
No 42
>smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322.
Probab=98.90 E-value=4.2e-09 Score=85.42 Aligned_cols=62 Identities=31% Similarity=0.487 Sum_probs=56.9
Q ss_pred HhCCCccCCCCccHHHHHHHHHhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhh
Q 003740 127 KLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVG 190 (799)
Q Consensus 127 ~l~~~~~~Gl~~~~~~~~~r~~~~g~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~ 190 (799)
.|++++..||+.++ +.+|++.||.|.++.++.+++|+.+|++|+++++++|++++++|++++
T Consensus 2 ~l~~~~~~GLs~~~--v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~~ 63 (64)
T smart00831 2 RLQTSLESGLSSEE--AARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALLG 63 (64)
T ss_pred CCCCCcccCCCHHH--HHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 36788888999876 999999999999999989999999999999999999999999998765
No 43
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=98.88 E-value=9e-09 Score=110.87 Aligned_cols=114 Identities=20% Similarity=0.262 Sum_probs=88.9
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC--ce-eecchhhhccCHHHHhhhcCCceEEE-ecCc
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN--GI-AIEGPEFREKSDEELSKLIPKIQVMA-RSSP 735 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~--~~-~~~g~~~~~~~~~~~~~~~~~~~v~a-r~sP 735 (799)
++.||+.+.++.|++.|+++.++||.....+..+.+++|+..-. .. +..|.-- -.+.+ -...
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~lt--------------g~v~g~iv~~ 246 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLT--------------GNVLGDIVDA 246 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEE--------------eEecCccCCc
Confidence 57999999999999999999999999988899999999985310 00 0000000 00110 0234
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC
Q 003740 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF 789 (799)
Q Consensus 736 ~dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi 789 (799)
..|.+.++.+.+++| +.+.++|||.||.+|++.|++|+|| ++.+..|+.||.
T Consensus 247 k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~--nAkp~Vk~~Ad~ 301 (322)
T PRK11133 247 QYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY--HAKPKVNEQAQV 301 (322)
T ss_pred ccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe--CCCHHHHhhCCE
Confidence 689999999987756 6799999999999999999999999 889999999999
No 44
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.83 E-value=2e-08 Score=101.90 Aligned_cols=111 Identities=24% Similarity=0.287 Sum_probs=90.4
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCce-------eecchhhhccCHHHHhhhcCCceEEE
Q 003740 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGI-------AIEGPEFREKSDEELSKLIPKIQVMA 731 (799)
Q Consensus 659 D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~-------~~~g~~~~~~~~~~~~~~~~~~~v~a 731 (799)
.+++|++.+.++.++++|.+|+++||-...-+..+|+++|+...-.. +++|. +.+
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG~------------------v~g 137 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTGR------------------VVG 137 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEece------------------eee
Confidence 78899999999999999999999999999999999999999753221 33444 444
Q ss_pred e-cCcccHHHHHHHHHHhCCC---EEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC
Q 003740 732 R-SSPMDKHTLVKHLRTTLGE---VVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF 789 (799)
Q Consensus 732 r-~sP~dK~~lV~~Lq~~~G~---vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi 789 (799)
. +..+.|...++.+.+.+|. .+.++|||.||.|||+.|+.+++.. +.+..+..|+.
T Consensus 138 ~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n--~~~~l~~~a~~ 197 (212)
T COG0560 138 PICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVN--PKPKLRALADV 197 (212)
T ss_pred eecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeC--cCHHHHHHHHH
Confidence 3 4448999999888877675 4899999999999999999999884 55555555655
No 45
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=98.79 E-value=4.9e-08 Score=103.64 Aligned_cols=53 Identities=38% Similarity=0.477 Sum_probs=47.2
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC
Q 003740 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF 789 (799)
Q Consensus 736 ~dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi 789 (799)
-.|..-++.|.+.+| +.|+++|||.||.+||+.|++|+||| +|.+.+|++||.
T Consensus 195 vsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~ 250 (270)
T PRK10513 195 VNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMG-NAIPSVKEVAQF 250 (270)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEec-CccHHHHHhcCe
Confidence 567777777776656 57999999999999999999999999 999999999998
No 46
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.78 E-value=4.3e-08 Score=100.59 Aligned_cols=123 Identities=19% Similarity=0.220 Sum_probs=91.1
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceee--cchhhhccCHHHHhhhcCCceEEEe-cCcc
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAI--EGPEFREKSDEELSKLIPKIQVMAR-SSPM 736 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~v~ar-~sP~ 736 (799)
+++|++++.++.|++.|+++.++||.+...+..+.+.+|+..-....+ .+..+. ..+.+. ..+.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~ 151 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGKLT-------------GLVEGPIVDAS 151 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCEEE-------------EEecCcccCCc
Confidence 579999999999999999999999999999999999999964211000 000000 001111 1234
Q ss_pred cHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC-----ChHhHHHh
Q 003740 737 DKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF-----NFSSRKTY 797 (799)
Q Consensus 737 dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi-----nf~si~~~ 797 (799)
.|..+++.+.+++| +.+.|+||+.||.+|++.|++++++ ++.+..+++||. ||+.+...
T Consensus 152 ~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~--~~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 152 YKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAF--NAKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred ccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEe--CCCHHHHHhchhccCCCCHHHHHhh
Confidence 48888887776634 3578999999999999999999988 467889999988 88877654
No 47
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=98.77 E-value=3.5e-08 Score=95.19 Aligned_cols=113 Identities=17% Similarity=0.252 Sum_probs=90.1
Q ss_pred eeeeeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceE
Q 003740 650 TCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQV 729 (799)
Q Consensus 650 ~~lg~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v 729 (799)
..++.+.+.|. .+|+.|++.|+++.++||++...+..+.+.+|+.. .
T Consensus 24 ~~~~~~~~~~~------~~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~---------------------------~ 70 (154)
T TIGR01670 24 EEIKAFNVRDG------YGIRCALKSGIEVAIITGRKAKLVEDRCKTLGITH---------------------------L 70 (154)
T ss_pred cEEEEEechhH------HHHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCE---------------------------E
Confidence 34455545443 29999999999999999999999999999999964 3
Q ss_pred EEecCcccHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC--------C-hHhHHHh
Q 003740 730 MARSSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF--------N-FSSRKTY 797 (799)
Q Consensus 730 ~ar~sP~dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi--------n-f~si~~~ 797 (799)
+... ..|...++.+.+++| +.+.|+||+.||.+|++.|+++++|. .+.+..+..||. . |..+++.
T Consensus 71 ~~~~--~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~-~~~~~~~~~a~~i~~~~~~~g~~~~~~~~ 147 (154)
T TIGR01670 71 YQGQ--SNKLIAFSDILEKLALAPENVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLIPRADYVTRIAGGRGAVREVCEL 147 (154)
T ss_pred Eecc--cchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEecC-CcCHHHHHhCCEEecCCCCCcHHHHHHHH
Confidence 3322 457777777765434 67999999999999999999999999 889999999997 2 7776665
Q ss_pred h
Q 003740 798 I 798 (799)
Q Consensus 798 i 798 (799)
+
T Consensus 148 ~ 148 (154)
T TIGR01670 148 L 148 (154)
T ss_pred H
Confidence 4
No 48
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=98.77 E-value=1e-07 Score=100.91 Aligned_cols=137 Identities=30% Similarity=0.392 Sum_probs=99.5
Q ss_pred CcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC----Cc--------------------------------
Q 003740 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-------------------------------- 704 (799)
Q Consensus 661 ~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~----~~-------------------------------- 704 (799)
+.+.++++|+++++.|+++.++||.....+..+.+++|+... |+
T Consensus 21 i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~~~~ 100 (264)
T COG0561 21 ISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEELLELLEDFQG 100 (264)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHHHHHHHhccC
Confidence 899999999999999999999999999999999999999742 11
Q ss_pred --eeecchh---------------------------hhc----------cCH---HH----HhhhcC-CceEEEecCc--
Q 003740 705 --IAIEGPE---------------------------FRE----------KSD---EE----LSKLIP-KIQVMARSSP-- 735 (799)
Q Consensus 705 --~~~~g~~---------------------------~~~----------~~~---~~----~~~~~~-~~~v~ar~sP-- 735 (799)
..+...+ ... ... ++ +.+.++ ....+.+..|
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~ 180 (264)
T COG0561 101 IALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGLTVSSSGPIS 180 (264)
T ss_pred ceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccceEEEEcCCce
Confidence 0000000 000 001 11 111222 2233334333
Q ss_pred -------ccHHHHHHHHHHhCCCE---EEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC-----ChHhHHHhh
Q 003740 736 -------MDKHTLVKHLRTTLGEV---VAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF-----NFSSRKTYI 798 (799)
Q Consensus 736 -------~dK~~lV~~Lq~~~G~v---Va~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi-----nf~si~~~i 798 (799)
.+|..-++.|.+.+|-. |+++||+.||.+||+.|+.|+||| ++++.+|+.||+ +-..|.++|
T Consensus 181 lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~-Na~~~~k~~A~~vt~~n~~~Gv~~~l 257 (264)
T COG0561 181 LDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMG-NADEELKELADYVTTSNDEDGVAEAL 257 (264)
T ss_pred EEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeecc-CCCHHHHhhCCcccCCccchHHHHHH
Confidence 58999999998876754 999999999999999999999999 999999999996 555555443
No 49
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=98.72 E-value=1.1e-07 Score=100.97 Aligned_cols=129 Identities=19% Similarity=0.240 Sum_probs=91.4
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC----Cc-eee--cch---------------------
Q 003740 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IAI--EGP--------------------- 710 (799)
Q Consensus 659 D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~----~~-~~~--~g~--------------------- 710 (799)
..+-+..+++|++|++.|+++.+.||.....+..+.+++|+... |+ .+. .|+
T Consensus 18 ~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~~~~~~i~~~~~~ 97 (272)
T PRK15126 18 HHLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPADVAELVLHQQWD 97 (272)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCHHHHHHHHHHhhh
Confidence 35889999999999999999999999999999999999998532 22 000 000
Q ss_pred --------------------hh----------------hcc------------CHHH-------HhhhcC-CceEE----
Q 003740 711 --------------------EF----------------REK------------SDEE-------LSKLIP-KIQVM---- 730 (799)
Q Consensus 711 --------------------~~----------------~~~------------~~~~-------~~~~~~-~~~v~---- 730 (799)
.+ ..+ .+++ +.+.++ ++.+.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ 177 (272)
T PRK15126 98 TRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQIQLNEALGERAHLCFSAT 177 (272)
T ss_pred cCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHHHHHHHHhcCCEEEEEcCC
Confidence 00 000 0011 111111 11111
Q ss_pred --EecCc--ccHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcC
Q 003740 731 --ARSSP--MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCC 788 (799)
Q Consensus 731 --ar~sP--~dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaD 788 (799)
-..+| -.|..-++.|.+.+| +.|+++|||-||.+||+.|+.|+||| +|.+.+|++||
T Consensus 178 ~~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-Na~~~vK~~A~ 241 (272)
T PRK15126 178 DCLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMG-NAMPQLRAELP 241 (272)
T ss_pred cEEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceecc-CChHHHHHhCC
Confidence 12223 368888888887766 57999999999999999999999999 99999999998
No 50
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=98.71 E-value=1.1e-07 Score=97.38 Aligned_cols=129 Identities=23% Similarity=0.340 Sum_probs=92.4
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC----Cc-eeecc-hhh--hcc----------------
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IAIEG-PEF--REK---------------- 715 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~----~~-~~~~g-~~~--~~~---------------- 715 (799)
.+-|.+.++|++|++.|++++++||.+...+..+++.+++... ++ .+... ... ...
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 4889999999999999999999999999999999999998632 22 11110 000 000
Q ss_pred -------------------CHHHHhhhcC--CceEE-----Ee--cCcccHHHHHHHHHHhCC---CEEEEEcCCccCHH
Q 003740 716 -------------------SDEELSKLIP--KIQVM-----AR--SSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAP 764 (799)
Q Consensus 716 -------------------~~~~~~~~~~--~~~v~-----ar--~sP~dK~~lV~~Lq~~~G---~vVa~~GDG~NDap 764 (799)
..+.+.+.+. .+.+. .. ....+|...++.+.+.+| ..++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 0011111111 11111 11 224689999998887655 35899999999999
Q ss_pred hhhcCCeeeecCCCCCHHHHHhcCC
Q 003740 765 ALHEADIGLAMGIAGTEVELECCCF 789 (799)
Q Consensus 765 AL~~AdVGiamgi~gtevak~aaDi 789 (799)
|++.|++|+||+ +|.+.+|+.||+
T Consensus 178 ml~~ag~~vam~-na~~~~k~~A~~ 201 (215)
T TIGR01487 178 LFRVVGFKVAVA-NADDQLKEIADY 201 (215)
T ss_pred HHHhCCCeEEcC-CccHHHHHhCCE
Confidence 999999999999 999999999997
No 51
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=98.66 E-value=1.5e-07 Score=98.08 Aligned_cols=139 Identities=28% Similarity=0.345 Sum_probs=99.3
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC----Cc-----------------------------
Q 003740 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG----------------------------- 704 (799)
Q Consensus 658 ~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~----~~----------------------------- 704 (799)
...+-|.+.+++++++++|+++.+.||.....+..+..++++... ++
T Consensus 13 ~~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~ 92 (254)
T PF08282_consen 13 DGKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLK 92 (254)
T ss_dssp TSSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHH
T ss_pred CCeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhh
Confidence 345679999999999999999999999999999999999998621 11
Q ss_pred -------------eeecch---hhh-----------------------------ccCH-------HHHhhhcCCceEEEe
Q 003740 705 -------------IAIEGP---EFR-----------------------------EKSD-------EELSKLIPKIQVMAR 732 (799)
Q Consensus 705 -------------~~~~g~---~~~-----------------------------~~~~-------~~~~~~~~~~~v~ar 732 (799)
...... ... ...+ +++.+.++....+.+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 172 (254)
T PF08282_consen 93 EHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVR 172 (254)
T ss_dssp HTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEE
T ss_pred hcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEE
Confidence 000000 000 0001 122333333212222
Q ss_pred -------cCc--ccHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC------ChHhH
Q 003740 733 -------SSP--MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF------NFSSR 794 (799)
Q Consensus 733 -------~sP--~dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi------nf~si 794 (799)
.+| .+|..-++.|.+.+| +.++++||+.||.+||+.|+.|+||| ++++..|+.||. + ..|
T Consensus 173 ~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~-na~~~~k~~a~~i~~~~~~-~gv 250 (254)
T PF08282_consen 173 SSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMG-NATPELKKAADYITPSNND-DGV 250 (254)
T ss_dssp EETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEET-TS-HHHHHHSSEEESSGTC-THH
T ss_pred ecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEc-CCCHHHHHhCCEEecCCCC-ChH
Confidence 223 799999999987655 58899999999999999999999999 999999999998 4 666
Q ss_pred HHhh
Q 003740 795 KTYI 798 (799)
Q Consensus 795 ~~~i 798 (799)
+++|
T Consensus 251 ~~~i 254 (254)
T PF08282_consen 251 AKAI 254 (254)
T ss_dssp HHHH
T ss_pred HHhC
Confidence 6654
No 52
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=98.65 E-value=4.7e-08 Score=95.22 Aligned_cols=93 Identities=17% Similarity=0.232 Sum_probs=78.2
Q ss_pred HHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHHHHHHHHH
Q 003740 667 ESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLR 746 (799)
Q Consensus 667 ~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~lV~~Lq 746 (799)
.+|+.|++.|+++.++|+.+...+..+.+.+|+.. +|... ..|-..++.+.
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~---------------------------~f~~~--kpkp~~~~~~~ 91 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR---------------------------FHEGI--KKKTEPYAQML 91 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE---------------------------EEecC--CCCHHHHHHHH
Confidence 48999999999999999999999999999999964 44333 24445555555
Q ss_pred HhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC
Q 003740 747 TTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF 789 (799)
Q Consensus 747 ~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi 789 (799)
+++| +.++++||+.||.+|++.|++++||+ ++.+..|+.||.
T Consensus 92 ~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~-nA~~~lk~~A~~ 136 (169)
T TIGR02726 92 EEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVG-DAVADVKEAAAY 136 (169)
T ss_pred HHcCcCHHHEEEECCCHHHHHHHHHCCCeEECc-CchHHHHHhCCE
Confidence 4434 57999999999999999999999999 999999999986
No 53
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=98.64 E-value=2.4e-07 Score=95.85 Aligned_cols=128 Identities=26% Similarity=0.322 Sum_probs=91.3
Q ss_pred CcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC----Cc-eeec---chhhhc--c---------------
Q 003740 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IAIE---GPEFRE--K--------------- 715 (799)
Q Consensus 661 ~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~----~~-~~~~---g~~~~~--~--------------- 715 (799)
+.|.+.++|+++++.|++++++||.....+..+++++|+... ++ .+.. ++.+.. +
T Consensus 21 i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (230)
T PRK01158 21 LSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAYSELKKRFP 100 (230)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHHHhcc
Confidence 778999999999999999999999999999999999998532 22 1111 111000 0
Q ss_pred ------------------------CHHHHhhhc----CCceE-----EEecCcc--cHHHHHHHHHHhCC---CEEEEEc
Q 003740 716 ------------------------SDEELSKLI----PKIQV-----MARSSPM--DKHTLVKHLRTTLG---EVVAVTG 757 (799)
Q Consensus 716 ------------------------~~~~~~~~~----~~~~v-----~ar~sP~--dK~~lV~~Lq~~~G---~vVa~~G 757 (799)
..+++.+.+ ....+ +....|. .|..-++.+.+.+| ..++++|
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~G 180 (230)
T PRK01158 101 EASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAIG 180 (230)
T ss_pred ccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEEC
Confidence 001111111 11111 1233333 48888888877655 4689999
Q ss_pred CCccCHHhhhcCCeeeecCCCCCHHHHHhcCC
Q 003740 758 DGTNDAPALHEADIGLAMGIAGTEVELECCCF 789 (799)
Q Consensus 758 DG~NDapAL~~AdVGiamgi~gtevak~aaDi 789 (799)
|+.||.+|++.|++|+||| ++.+..|++||.
T Consensus 181 D~~NDi~m~~~ag~~vam~-Na~~~vk~~a~~ 211 (230)
T PRK01158 181 DSENDLEMFEVAGFGVAVA-NADEELKEAADY 211 (230)
T ss_pred CchhhHHHHHhcCceEEec-CccHHHHHhcce
Confidence 9999999999999999999 999999999998
No 54
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.62 E-value=1.9e-07 Score=94.28 Aligned_cols=119 Identities=21% Similarity=0.222 Sum_probs=86.9
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
+++|++.+.++.|++.|+++.++|+-....+..+++.+|+..-....+...+-... -|. .+-...|..|.
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g~~--------~p~--~~~~~~~~~k~ 149 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKGFI--------QPD--GIVRVTFDNKG 149 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCCeE--------ecc--eeeEEccccHH
Confidence 57999999999999999999999999999999999999975311111111100000 011 11124567788
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC
Q 003740 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF 789 (799)
Q Consensus 740 ~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi 789 (799)
..++.+.+++| +.+.|+||+.||.+|++.|+++++++ .+....+.|+|.
T Consensus 150 ~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~-~~~~~~~~a~~~ 201 (201)
T TIGR01491 150 EAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLG-DEGHADYLAKDL 201 (201)
T ss_pred HHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEEC-CCccchhhcccC
Confidence 88887766534 35899999999999999999999998 666667777763
No 55
>PRK10976 putative hydrolase; Provisional
Probab=98.61 E-value=3.3e-07 Score=97.06 Aligned_cols=52 Identities=27% Similarity=0.307 Sum_probs=46.1
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcC
Q 003740 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCC 788 (799)
Q Consensus 736 ~dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaD 788 (799)
..|..-++.|.+.+| +.|+++|||.||.+||+.|+.|+||| +|.+.+|+.||
T Consensus 189 vsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~ 243 (266)
T PRK10976 189 VSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMG-NAHQRLKDLLP 243 (266)
T ss_pred CChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeec-CCcHHHHHhCC
Confidence 357777887776656 56999999999999999999999999 99999999987
No 56
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.59 E-value=2.5e-07 Score=93.85 Aligned_cols=119 Identities=24% Similarity=0.283 Sum_probs=88.4
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC--CceeecchhhhccCHHHHhhhcCCceEEE--ecCc
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD--NGIAIEGPEFREKSDEELSKLIPKIQVMA--RSSP 735 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~v~a--r~sP 735 (799)
++.||+.+.++.|+++ +++.++|+-....+..+.+++||..- +.....+.. .+.+ -..|
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~----------------~i~~~~~~~p 130 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDG----------------MITGYDLRQP 130 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCC----------------eEECcccccc
Confidence 4589999999999999 99999999999999999999998531 111111110 0111 1247
Q ss_pred ccHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC----ChHhHHHh
Q 003740 736 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF----NFSSRKTY 797 (799)
Q Consensus 736 ~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi----nf~si~~~ 797 (799)
..|...++.++.. ++.+.|+|||.||.+|.++|++|+..+ .+.++..+.++. ++..+.+.
T Consensus 131 ~~k~~~l~~~~~~-~~~~v~iGDs~~D~~~~~aa~~~v~~~-~~~~~~~~~~~~~~~~~~~el~~~ 194 (205)
T PRK13582 131 DGKRQAVKALKSL-GYRVIAAGDSYNDTTMLGEADAGILFR-PPANVIAEFPQFPAVHTYDELLAA 194 (205)
T ss_pred chHHHHHHHHHHh-CCeEEEEeCCHHHHHHHHhCCCCEEEC-CCHHHHHhCCcccccCCHHHHHHH
Confidence 8899999999888 889999999999999999999999887 444444444443 66665543
No 57
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.56 E-value=2.3e-07 Score=92.34 Aligned_cols=93 Identities=20% Similarity=0.276 Sum_probs=80.6
Q ss_pred HHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHHHHHHHHH
Q 003740 667 ESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLR 746 (799)
Q Consensus 667 ~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~lV~~Lq 746 (799)
.+|+.|++.|+++.++||.....+..+++++|+.. +|. ...+|...++.+.
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~---------------------------~f~--g~~~k~~~l~~~~ 105 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH---------------------------LYQ--GQSNKLIAFSDLL 105 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce---------------------------eec--CCCcHHHHHHHHH
Confidence 69999999999999999999999999999999864 343 3356877777776
Q ss_pred HhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC
Q 003740 747 TTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF 789 (799)
Q Consensus 747 ~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi 789 (799)
+++| +.|+|+||+.||.+|++.|+++++++ ++.+..+..||+
T Consensus 106 ~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~-~~~~~~~~~a~~ 150 (183)
T PRK09484 106 EKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLLPRADY 150 (183)
T ss_pred HHhCCCHHHEEEECCCHHHHHHHHHCCCeEecC-ChhHHHHHhCCE
Confidence 6645 47999999999999999999999998 888999988887
No 58
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=98.55 E-value=5.4e-07 Score=92.77 Aligned_cols=129 Identities=24% Similarity=0.327 Sum_probs=91.4
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC----Cc-eeecchh----hh-ccC-------------
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IAIEGPE----FR-EKS------------- 716 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~----~~-~~~~g~~----~~-~~~------------- 716 (799)
.+.+.+.++|+.+++.|+.+.++||.+...+..+++++|+... ++ .+..... +. .+.
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 4778899999999999999999999999999999999996422 21 1111100 00 000
Q ss_pred -----------------------HHHHhhhc---C-CceE-----EEecCc--ccHHHHHHHHHHhCC---CEEEEEcCC
Q 003740 717 -----------------------DEELSKLI---P-KIQV-----MARSSP--MDKHTLVKHLRTTLG---EVVAVTGDG 759 (799)
Q Consensus 717 -----------------------~~~~~~~~---~-~~~v-----~ar~sP--~dK~~lV~~Lq~~~G---~vVa~~GDG 759 (799)
.+.+.+.. . ...+ +....| .+|..-++.+.+++| +.|+++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 01111111 0 0111 112223 589999999887756 579999999
Q ss_pred ccCHHhhhcCCeeeecCCCCCHHHHHhcCC
Q 003740 760 TNDAPALHEADIGLAMGIAGTEVELECCCF 789 (799)
Q Consensus 760 ~NDapAL~~AdVGiamgi~gtevak~aaDi 789 (799)
.||.+||+.|++|+||| ++.+..|+.||.
T Consensus 175 ~NDi~m~~~ag~~vam~-Na~~~~k~~A~~ 203 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVA-NAQPELKEWADY 203 (225)
T ss_pred HhhHHHHHhcCceEEcC-ChhHHHHHhcCe
Confidence 99999999999999999 999999999996
No 59
>PLN02887 hydrolase family protein
Probab=98.52 E-value=7.7e-07 Score=102.75 Aligned_cols=52 Identities=33% Similarity=0.446 Sum_probs=43.9
Q ss_pred cHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC
Q 003740 737 DKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF 789 (799)
Q Consensus 737 dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi 789 (799)
+|..-++.|.+.+| +-|+++|||.||.+||+.|+.|+||| +|.+..|++||.
T Consensus 507 SKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMg-NA~eeVK~~Ad~ 561 (580)
T PLN02887 507 SKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALS-NGAEKTKAVADV 561 (580)
T ss_pred CHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeC-CCCHHHHHhCCE
Confidence 45555555555545 46899999999999999999999999 999999999997
No 60
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.48 E-value=7.7e-07 Score=90.99 Aligned_cols=130 Identities=17% Similarity=0.122 Sum_probs=88.4
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC---CceeecchhhhccCHHHHhhhcCCceEE--Eec
Q 003740 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD---NGIAIEGPEFREKSDEELSKLIPKIQVM--ARS 733 (799)
Q Consensus 659 D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~v~--ar~ 733 (799)
-+++||+++.++.|++.|+++.++||.....+..+.+.++.... +...+.|..+.. ..|.-..+ ...
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~--------~~p~~~~~~~~~~ 140 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHI--------DWPHPCDGTCQNQ 140 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEE--------eCCCCCccccccC
Confidence 47899999999999999999999999999999999988754321 122333332211 01110010 011
Q ss_pred CcccHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHH--hcCC---ChHhHHHhh
Q 003740 734 SPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELE--CCCF---NFSSRKTYI 798 (799)
Q Consensus 734 sP~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~--aaDi---nf~si~~~i 798 (799)
....|..+++.++.. .+.+.|+|||.||.+|++.||+.+|=+ .-.+-.++ -+.+ ||..|.+.+
T Consensus 141 cg~~K~~~l~~~~~~-~~~~i~iGDg~~D~~~a~~Ad~~~ar~-~l~~~~~~~~~~~~~~~~f~di~~~l 208 (214)
T TIGR03333 141 CGCCKPSLIRKLSEP-NDYHIVIGDSVTDVEAAKQSDLCFARD-YLLNECEELGLNHAPFQDFYDVRKEL 208 (214)
T ss_pred CCCCHHHHHHHHhhc-CCcEEEEeCCHHHHHHHHhCCeeEehH-HHHHHHHHcCCCccCcCCHHHHHHHH
Confidence 135799999999877 778899999999999999999988755 21111111 1122 888887654
No 61
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=98.40 E-value=2.3e-06 Score=90.82 Aligned_cols=53 Identities=25% Similarity=0.308 Sum_probs=45.9
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC
Q 003740 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF 789 (799)
Q Consensus 736 ~dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi 789 (799)
.+|..-++.+.+++| +-|+++||+.||.+|++.|++|+||| ++.+..|+.||.
T Consensus 198 ~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamg-na~~~lk~~Ad~ 253 (272)
T PRK10530 198 NSKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMG-NADDAVKARADL 253 (272)
T ss_pred CChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEec-CchHHHHHhCCE
Confidence 457777777766656 46899999999999999999999999 899999999997
No 62
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.38 E-value=6.7e-07 Score=85.46 Aligned_cols=108 Identities=21% Similarity=0.299 Sum_probs=76.7
Q ss_pred CcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCc--eeecchhhhccCHHHHhhhcCCceEEEecCcccH
Q 003740 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG--IAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (799)
Q Consensus 661 ~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK 738 (799)
+-||+++.++.|++.|.+|.++||--..-+..+|.++||...+- ..+.-...-++.. +....- -+...-|
T Consensus 89 lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~g------fd~~~p--tsdsggK 160 (227)
T KOG1615|consen 89 LTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLG------FDTNEP--TSDSGGK 160 (227)
T ss_pred cCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccc------cccCCc--cccCCcc
Confidence 46999999999999999999999999999999999999975321 0000000000000 000001 1223589
Q ss_pred HHHHHHHHHhCC-CEEEEEcCCccCHHhhhcCCeeeecC
Q 003740 739 HTLVKHLRTTLG-EVVAVTGDGTNDAPALHEADIGLAMG 776 (799)
Q Consensus 739 ~~lV~~Lq~~~G-~vVa~~GDG~NDapAL~~AdVGiamg 776 (799)
...++.+++.+. ..++|+|||.||.+|+..||.=++.|
T Consensus 161 a~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 161 AEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred HHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 999999987633 68999999999999999988777555
No 63
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=98.38 E-value=2.9e-06 Score=89.30 Aligned_cols=129 Identities=30% Similarity=0.426 Sum_probs=91.5
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC----Cc-ee----------------------------
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IA---------------------------- 706 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~----~~-~~---------------------------- 706 (799)
++.+++.++|++|++.|+++.++||.+...+..+.+++|+... ++ .+
T Consensus 16 ~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~i~~~~i~~~~~~~i~~~~~~~ 95 (256)
T TIGR00099 16 TISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQGEILYKKPLDLDLVEEILNFLKKH 95 (256)
T ss_pred ccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCCCCEEeecCCCHHHHHHHHHHHHHc
Confidence 5788999999999999999999999999999999999997521 11 00
Q ss_pred -------------ecch--h-hh--------------c---------------cCH---HHHhhhcC------CceE---
Q 003740 707 -------------IEGP--E-FR--------------E---------------KSD---EELSKLIP------KIQV--- 729 (799)
Q Consensus 707 -------------~~g~--~-~~--------------~---------------~~~---~~~~~~~~------~~~v--- 729 (799)
+... . +. . .++ +++.+.+. .+.+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 175 (256)
T TIGR00099 96 GLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDDILKILLLFLDPEDLDLLIEALNKLELEENVSVVSS 175 (256)
T ss_pred CcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcccceEEEEECCHHHHHHHHHHhhhhhhcCCEEEEEe
Confidence 0000 0 00 0 000 01111111 1211
Q ss_pred ---EEecCc--ccHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC
Q 003740 730 ---MARSSP--MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF 789 (799)
Q Consensus 730 ---~ar~sP--~dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi 789 (799)
+-...| ..|..-++.+.+.+| +.++++||+.||.+|++.|+.|+||| ++.+..|+.||.
T Consensus 176 ~~~~leI~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~-na~~~~k~~a~~ 242 (256)
T TIGR00099 176 GPYSIEITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMG-NADEELKALADY 242 (256)
T ss_pred cCceEEecCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEec-CchHHHHHhCCE
Confidence 112233 468888998887755 57999999999999999999999999 999999999997
No 64
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.37 E-value=1.1e-06 Score=87.99 Aligned_cols=92 Identities=29% Similarity=0.320 Sum_probs=71.6
Q ss_pred ccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcc-c--HH
Q 003740 663 PGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM-D--KH 739 (799)
Q Consensus 663 ~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~-d--K~ 739 (799)
|++.+.|+.++++|++++++||+....+..+|+.+||...+-..-+. +.+ ......++.+|. + |.
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~--~~~----------~~~~~~~~~~~~~~~~K~ 159 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNEL--FDN----------GGGIFTGRITGSNCGGKA 159 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEE--ECT----------TCCEEEEEEEEEEESHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEee--eec----------ccceeeeeECCCCCCcHH
Confidence 88889999999999999999999999999999999997532111111 000 022356777766 5 99
Q ss_pred HHHHHH------HHhCCCEEEEEcCCccCHHhhh
Q 003740 740 TLVKHL------RTTLGEVVAVTGDGTNDAPALH 767 (799)
Q Consensus 740 ~lV~~L------q~~~G~vVa~~GDG~NDapAL~ 767 (799)
..++.+ +.. ...+.++|||.||.||||
T Consensus 160 ~~l~~~~~~~~~~~~-~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 160 EALKELYIRDEEDID-PDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHTHT-CCEEEEEESSGGGHHHHH
T ss_pred HHHHHHHHHhhcCCC-CCeEEEEECCHHHHHHhC
Confidence 999999 334 689999999999999986
No 65
>PLN02954 phosphoserine phosphatase
Probab=98.31 E-value=5.5e-06 Score=85.22 Aligned_cols=123 Identities=24% Similarity=0.319 Sum_probs=85.2
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC----ceeecchhhhccCHHHHhhhcCCceEEEe---
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN----GIAIEGPEFREKSDEELSKLIPKIQVMAR--- 732 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~v~ar--- 732 (799)
+++|++++.++.|++.|+++.++||.....+..+++.+|+...+ ...+..+. .+.+.
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g----------------~~~g~~~~ 147 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSG----------------EYAGFDEN 147 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCC----------------cEECccCC
Confidence 36899999999999999999999999999999999999996311 00000000 01111
Q ss_pred ---cCcccHHHHHHHHHHhCC-CEEEEEcCCccCHHhhhc--CCeeeecCCCC-CHHHHHhcCC---ChHhHHHhh
Q 003740 733 ---SSPMDKHTLVKHLRTTLG-EVVAVTGDGTNDAPALHE--ADIGLAMGIAG-TEVELECCCF---NFSSRKTYI 798 (799)
Q Consensus 733 ---~sP~dK~~lV~~Lq~~~G-~vVa~~GDG~NDapAL~~--AdVGiamgi~g-tevak~aaDi---nf~si~~~i 798 (799)
+.+..|...++.+++++| +.+.|+||+.||..|.++ ++++++.|... .+.....+|. ++..+.+.+
T Consensus 148 ~~~~~~~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~el~~~~ 223 (224)
T PLN02954 148 EPTSRSGGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVTDFQDLIEVL 223 (224)
T ss_pred CcccCCccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECCHHHHHHhh
Confidence 122458888888876645 568899999999999877 67777766221 2333445676 777776543
No 66
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.24 E-value=2.7e-06 Score=78.78 Aligned_cols=93 Identities=22% Similarity=0.329 Sum_probs=81.5
Q ss_pred HHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHHHHHHHHH
Q 003740 667 ESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLR 746 (799)
Q Consensus 667 ~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~lV~~Lq 746 (799)
-.|+.+.++||+|-++||.+...+..=|+++||.. +|-. -.+|....+.|.
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~---------------------------~~qG--~~dK~~a~~~L~ 92 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH---------------------------LYQG--ISDKLAAFEELL 92 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce---------------------------eeec--hHhHHHHHHHHH
Confidence 38999999999999999999999999999999963 3332 369999999888
Q ss_pred HhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcCC
Q 003740 747 TTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCCF 789 (799)
Q Consensus 747 ~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaDi 789 (799)
++++ +-|+.+||-.||-|+|+....++|.. .+-+-.++.||.
T Consensus 93 ~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~-dAh~~v~~~a~~ 137 (170)
T COG1778 93 KKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVA-DAHPLLKQRADY 137 (170)
T ss_pred HHhCCCHHHhhhhcCccccHHHHHHcCCccccc-ccCHHHHHhhHh
Confidence 7755 67999999999999999999999998 888888888877
No 67
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=98.20 E-value=3.8e-06 Score=82.93 Aligned_cols=101 Identities=24% Similarity=0.275 Sum_probs=70.9
Q ss_pred CcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHHH
Q 003740 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHT 740 (799)
Q Consensus 661 ~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~ 740 (799)
++|++.+.++.|++.|+++.++||.....+..+++.+|+..--...+...+ +.. ...++.--....+..|..
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~-----~g~---~~g~~~~~~~~~~~~K~~ 145 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDD-----NGL---LTGPIEGQVNPEGECKGK 145 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECC-----CCE---EeCccCCcccCCcchHHH
Confidence 589999999999999999999999999999999999998631110010000 000 000000001245688999
Q ss_pred HHHHHHHhCC---CEEEEEcCCccCHHhhhcC
Q 003740 741 LVKHLRTTLG---EVVAVTGDGTNDAPALHEA 769 (799)
Q Consensus 741 lV~~Lq~~~G---~vVa~~GDG~NDapAL~~A 769 (799)
.++.++++.| +.+.++|||.||.||++.|
T Consensus 146 ~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 146 VLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 9999876533 4689999999999999876
No 68
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=98.20 E-value=6.8e-06 Score=81.84 Aligned_cols=114 Identities=19% Similarity=0.208 Sum_probs=79.0
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCc--c
Q 003740 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP--M 736 (799)
Q Consensus 659 D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP--~ 736 (799)
-+++|++.+.++.|++.|+++.++|+.+......+.+..|+...-..++..+...+ . ..+....++-++-+...| .
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~-~-~g~~~~~~~~~~~~~~~~~g~ 148 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPASFD-N-DGRHIVWPHHCHGCCSCPCGC 148 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCceEC-C-CCcEEEecCCCCccCcCCCCC
Confidence 47899999999999999999999999999999999999998643223332222110 0 011111111101111122 3
Q ss_pred cHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeee
Q 003740 737 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 774 (799)
Q Consensus 737 dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGia 774 (799)
.|..+++.+++++.+.+.++|||.||..|.++||+-+|
T Consensus 149 ~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 149 CKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 69999999887534678999999999999999998775
No 69
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=98.18 E-value=6.1e-06 Score=84.67 Aligned_cols=127 Identities=20% Similarity=0.172 Sum_probs=84.2
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC----ceeecchhhhccCHHHHhhhcCCceEE---Ee
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN----GIAIEGPEFREKSDEELSKLIPKIQVM---AR 732 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~v~---ar 732 (799)
+++||+.+.++.|++.|+++.++||-+...+..+.+.+ +.... ...++|..+.. ..|.-... .+
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~--------~kp~p~~~~~~~~ 144 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITI--------TWPHPCDEHCQNH 144 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEE--------eccCCcccccccc
Confidence 67999999999999999999999999999999999998 64311 11122322110 00000000 00
Q ss_pred cCcccHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHh--cCC---ChHhHHHhh
Q 003740 733 SSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELEC--CCF---NFSSRKTYI 798 (799)
Q Consensus 733 ~sP~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~a--aDi---nf~si~~~i 798 (799)
+ ...|...++.++.. ...+.|+|||.||.+|.++||+.++-+ .-.+.+++. +.+ ||..|.+.+
T Consensus 145 ~-~~~K~~~l~~~~~~-~~~~i~iGDs~~Di~aa~~Ag~~~a~~-~l~~~~~~~~~~~~~~~~f~ei~~~l 212 (219)
T PRK09552 145 C-GCCKPSLIRKLSDT-NDFHIVIGDSITDLEAAKQADKVFARD-FLITKCEELGIPYTPFETFHDVQTEL 212 (219)
T ss_pred C-CCchHHHHHHhccC-CCCEEEEeCCHHHHHHHHHCCcceeHH-HHHHHHHHcCCCccccCCHHHHHHHH
Confidence 1 13588999988877 677899999999999999999977632 111221211 222 888887654
No 70
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=98.17 E-value=6.2e-06 Score=83.35 Aligned_cols=107 Identities=16% Similarity=0.151 Sum_probs=78.4
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCc--eeecchhhhccCHHHHhhhcCCceEE-EecC
Q 003740 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG--IAIEGPEFREKSDEELSKLIPKIQVM-ARSS 734 (799)
Q Consensus 658 ~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~v~-ar~s 734 (799)
..+++|++.+.++.+++.|+++.++||-....+..+++.+|+..--+ .....+. . ...+ +. -.+.
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g-------~---~~g~--~~~~~~~ 152 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDG-------I---YTGN--IDGNNCK 152 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCC-------E---EeCC--ccCCCCC
Confidence 45689999999999999999999999999999999999999953100 1110000 0 0000 00 1234
Q ss_pred cccHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecC
Q 003740 735 PMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMG 776 (799)
Q Consensus 735 P~dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamg 776 (799)
++.|...++.+.++.| +.+.++||+.||.|+++.|+.++++.
T Consensus 153 g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 153 GEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred ChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 6789988888765534 26789999999999999999999886
No 71
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=98.11 E-value=1.8e-05 Score=83.37 Aligned_cols=125 Identities=18% Similarity=0.156 Sum_probs=83.2
Q ss_pred CcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCcc----CCc-eeecch--h------hh--ccCHHHH-----
Q 003740 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILT----DNG-IAIEGP--E------FR--EKSDEEL----- 720 (799)
Q Consensus 661 ~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~----~~~-~~~~g~--~------~~--~~~~~~~----- 720 (799)
.-+.+.++|+.|++.|++++++||.....+..+.+++|+.. .|+ .++... . +. .++.+.+
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~i~~~~~~~il~ 96 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTEPEYPVIALGIPYEKIRARLE 96 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccCCCeEEEEcCCCHHHHHHHHH
Confidence 34568999999999999999999999999999999999752 233 222211 1 00 0110000
Q ss_pred ------------------------------------------------------hhhcC--CceEE-----EecC--ccc
Q 003740 721 ------------------------------------------------------SKLIP--KIQVM-----ARSS--PMD 737 (799)
Q Consensus 721 ------------------------------------------------------~~~~~--~~~v~-----ar~s--P~d 737 (799)
.+.+. .+.+. -... -..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ei~~~~~~ 176 (256)
T TIGR01486 97 ELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILWSEERRERFTEALVELGLEVTHGNRFYHVLGAGSD 176 (256)
T ss_pred HHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceecChHHHHHHHHHHHHcCCEEEeCCceEEEecCCCC
Confidence 00000 01110 0111 257
Q ss_pred HHHHHHHHHHhCC-----CEEEEEcCCccCHHhhhcCCeeeecCCCCC---HHHHHh
Q 003740 738 KHTLVKHLRTTLG-----EVVAVTGDGTNDAPALHEADIGLAMGIAGT---EVELEC 786 (799)
Q Consensus 738 K~~lV~~Lq~~~G-----~vVa~~GDG~NDapAL~~AdVGiamgi~gt---evak~a 786 (799)
|..-++.+.+.+| +.|.++||+.||.+||+.|++|+||| ++. +..|+.
T Consensus 177 Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~-Na~~~~~~lk~~ 232 (256)
T TIGR01486 177 KGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVP-GPNGPNVSLKPG 232 (256)
T ss_pred HHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeC-CCCCCccccCcc
Confidence 7777777776644 45999999999999999999999999 887 467775
No 72
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.09 E-value=1.8e-05 Score=84.09 Aligned_cols=43 Identities=16% Similarity=0.189 Sum_probs=39.3
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCcc
Q 003740 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILT 701 (799)
Q Consensus 659 D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~ 701 (799)
..+.+++.++|+.|++.|+++.++||.....+..+++++|+..
T Consensus 20 ~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~ 62 (273)
T PRK00192 20 TYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLED 62 (273)
T ss_pred CcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC
Confidence 4567889999999999999999999999999999999999853
No 73
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.96 E-value=5.7e-05 Score=80.21 Aligned_cols=40 Identities=10% Similarity=0.092 Sum_probs=37.2
Q ss_pred CcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCc
Q 003740 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL 700 (799)
Q Consensus 661 ~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~ 700 (799)
+-+.++++|++|++.|+++++.||.....+..+++++|+.
T Consensus 25 i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~ 64 (271)
T PRK03669 25 DWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQ 64 (271)
T ss_pred CcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCC
Confidence 4567999999999999999999999999999999999984
No 74
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=97.91 E-value=3.9e-05 Score=78.79 Aligned_cols=124 Identities=21% Similarity=0.297 Sum_probs=91.5
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCccc
Q 003740 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (799)
Q Consensus 658 ~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~d 737 (799)
...+-|++++++..|+++|++..++|+++...+..+.+..|+...-..++.+.+.. ...-.|..
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g~~~~~----------------~~KP~P~~ 150 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVGGDDVP----------------PPKPDPEP 150 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEcCCCCC----------------CCCcCHHH
Confidence 45678999999999999999999999999999999999999976543333322211 01113344
Q ss_pred HHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCC---eeeecCCC-CCHHHHHhcCC---ChHhHHHhh
Q 003740 738 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEAD---IGLAMGIA-GTEVELECCCF---NFSSRKTYI 798 (799)
Q Consensus 738 K~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~Ad---VGiamgi~-gtevak~aaDi---nf~si~~~i 798 (799)
...+.+.+... .+.+.||||..+|..|=++|+ ||+..|.+ +.+.....+|. +++.+...+
T Consensus 151 l~~~~~~~~~~-~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~~~el~~~l 217 (220)
T COG0546 151 LLLLLEKLGLD-PEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDSLAELLALL 217 (220)
T ss_pred HHHHHHHhCCC-hhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECCHHHHHHHH
Confidence 44444444333 246999999999999999998 88999853 56777777888 777776654
No 75
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=97.90 E-value=3.7e-05 Score=79.04 Aligned_cols=121 Identities=22% Similarity=0.308 Sum_probs=83.1
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCccc-
Q 003740 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD- 737 (799)
Q Consensus 659 D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~d- 737 (799)
-++.||+.+.++.|++.|+++.++||........+.+..|+...-..++.+++. .+..|..
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~------------------~~~kp~~~ 153 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSVVIGGDSL------------------PNKKPDPA 153 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccEEEcCCCC------------------CCCCcChH
Confidence 457899999999999999999999999999999999999986432233322221 1122221
Q ss_pred -HHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCe-eeec--CCC-CCHHHHHhcCC---ChHhHHHhh
Q 003740 738 -KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI-GLAM--GIA-GTEVELECCCF---NFSSRKTYI 798 (799)
Q Consensus 738 -K~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdV-Giam--gi~-gtevak~aaDi---nf~si~~~i 798 (799)
-..+++.++.. .+.+.|+||+.||..+.+.|++ ++.+ |.. ..+.....+|. +|..+.+.+
T Consensus 154 ~~~~~~~~~~~~-~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~~~~~l~~~l 221 (226)
T PRK13222 154 PLLLACEKLGLD-PEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVIDHFAELLPLL 221 (226)
T ss_pred HHHHHHHHcCCC-hhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEECCHHHHHHHH
Confidence 12333333333 3568899999999999999988 4444 321 34555556776 788877654
No 76
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=97.89 E-value=2.4e-05 Score=72.85 Aligned_cols=117 Identities=20% Similarity=0.154 Sum_probs=75.1
Q ss_pred cccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCc
Q 003740 656 GIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 735 (799)
Q Consensus 656 ~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP 735 (799)
....++++++.+.++.|++.|++++++||.....+....+.+|+......++......................+++-.|
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNP 99 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhhcccccccccccccccCCCCH
Confidence 45668899999999999999999999999999999999999998432222222111110000000000111112334444
Q ss_pred ccHHHHHHHHHHhCCCEEEEEcCCccCHHhhhc-CCeee
Q 003740 736 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHE-ADIGL 773 (799)
Q Consensus 736 ~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~-AdVGi 773 (799)
..+..+.+.+... .+.+.++||+.||.+|++. ..-++
T Consensus 100 ~~~~~~~~~~~~~-~~~~~~igD~~~d~~~~~~~g~~~i 137 (139)
T cd01427 100 DKLLAALKLLGVD-PEEVLMVGDSLNDIEMAKAAGGLGV 137 (139)
T ss_pred HHHHHHHHHcCCC-hhhEEEeCCCHHHHHHHHHcCCcee
Confidence 4455555555433 4679999999999999998 44444
No 77
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=97.80 E-value=0.00011 Score=76.37 Aligned_cols=52 Identities=23% Similarity=0.268 Sum_probs=46.5
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhcC
Q 003740 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVELECCC 788 (799)
Q Consensus 736 ~dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtevak~aaD 788 (799)
..|...++.|.+++| ..|+++||+.||.+||+.|+.|++|| ++.+-.|+.||
T Consensus 158 ~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~-na~~~~k~~a~ 212 (236)
T TIGR02471 158 ASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVG-NHDPELEGLRH 212 (236)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEc-CCcHHHHHhhc
Confidence 378888888887766 25789999999999999999999999 99999999999
No 78
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=97.78 E-value=0.00012 Score=75.23 Aligned_cols=43 Identities=12% Similarity=0.143 Sum_probs=38.8
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCc
Q 003740 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL 700 (799)
Q Consensus 658 ~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~ 700 (799)
.+..-+++.++|++|++.|++++++||.....+..+.+++|+.
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 3455677999999999999999999999999999999999974
No 79
>PRK08238 hypothetical protein; Validated
Probab=97.75 E-value=0.00012 Score=83.41 Aligned_cols=103 Identities=19% Similarity=0.239 Sum_probs=80.2
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
|++|++.+.+++++++|+++.++|+-+...+..+++.+|+.+ .++.+++ ..++.|+.|.
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd---~Vigsd~------------------~~~~kg~~K~ 130 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFD---GVFASDG------------------TTNLKGAAKA 130 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC---EEEeCCC------------------ccccCCchHH
Confidence 578999999999999999999999999999999999999832 2333322 1146677787
Q ss_pred HHHHHHHHhCCCE-EEEEcCCccCHHhhhcCCeeeecCCCCCHHHHHhc
Q 003740 740 TLVKHLRTTLGEV-VAVTGDGTNDAPALHEADIGLAMGIAGTEVELECC 787 (799)
Q Consensus 740 ~lV~~Lq~~~G~v-Va~~GDG~NDapAL~~AdVGiamgi~gtevak~aa 787 (799)
..++... |+. ..++||..||.|+++.|+-.++++ .+...++.+.
T Consensus 131 ~~l~~~l---~~~~~~yvGDS~~Dlp~~~~A~~av~Vn-~~~~l~~~a~ 175 (479)
T PRK08238 131 AALVEAF---GERGFDYAGNSAADLPVWAAARRAIVVG-ASPGVARAAR 175 (479)
T ss_pred HHHHHHh---CccCeeEecCCHHHHHHHHhCCCeEEEC-CCHHHHHHHH
Confidence 6655332 332 578899999999999999999998 6666655554
No 80
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=97.73 E-value=0.00018 Score=75.34 Aligned_cols=130 Identities=18% Similarity=0.217 Sum_probs=91.3
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC------Cc-eee-cchhhh----------------
Q 003740 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD------NG-IAI-EGPEFR---------------- 713 (799)
Q Consensus 658 ~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~------~~-~~~-~g~~~~---------------- 713 (799)
..+..|...+.++++++.|+.++.+||......+.+.+++|+..+ ++ .++ .|....
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~ 98 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDI 98 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHH
Confidence 456779999999999999999999999999999999999997644 22 111 110000
Q ss_pred ---------cc-----------------CHH-------HHhhhcC----CceE-EE-----ecCc--ccHHHHHHHHHHh
Q 003740 714 ---------EK-----------------SDE-------ELSKLIP----KIQV-MA-----RSSP--MDKHTLVKHLRTT 748 (799)
Q Consensus 714 ---------~~-----------------~~~-------~~~~~~~----~~~v-~a-----r~sP--~dK~~lV~~Lq~~ 748 (799)
.+ .++ ++.+.+. ++.+ .+ ...| ..|..-++.|++.
T Consensus 99 ~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~ 178 (249)
T TIGR01485 99 VVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQK 178 (249)
T ss_pred HHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHH
Confidence 00 000 1111111 1211 11 2233 5899999999887
Q ss_pred CC---CEEEEEcCCccCHHhhhc-CCeeeecCCCCCHHHHHhcC
Q 003740 749 LG---EVVAVTGDGTNDAPALHE-ADIGLAMGIAGTEVELECCC 788 (799)
Q Consensus 749 ~G---~vVa~~GDG~NDapAL~~-AdVGiamgi~gtevak~aaD 788 (799)
+| ..|+++||+.||.+||+. ++.|++|+ ++.+..|+.++
T Consensus 179 ~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~-na~~~~k~~~~ 221 (249)
T TIGR01485 179 LAMEPSQTLVCGDSGNDIELFEIGSVRGVIVS-NAQEELLQWYD 221 (249)
T ss_pred cCCCccCEEEEECChhHHHHHHccCCcEEEEC-CCHHHHHHHHH
Confidence 65 579999999999999998 77999999 99998887654
No 81
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=97.71 E-value=9.1e-05 Score=75.09 Aligned_cols=119 Identities=23% Similarity=0.259 Sum_probs=81.9
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.||+.+.++.|++.|+++.++||.+...+..+-+..|+...-+.++..++. ....| |.
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~~~~~~------------------~~~KP--~~ 134 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVIGSDEV------------------PRPKP--AP 134 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEEecCcC------------------CCCCC--Ch
Confidence 67899999999999999999999999999999999999996422222222110 11122 22
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeee---cCC-CCCHHHHHhcCC---ChHhHHHhh
Q 003740 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLA---MGI-AGTEVELECCCF---NFSSRKTYI 798 (799)
Q Consensus 740 ~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGia---mgi-~gtevak~aaDi---nf~si~~~i 798 (799)
.+++...+++| +.++|+||+.+|..+-++|++... -|. +..+..++.+|+ ++..+...+
T Consensus 135 ~~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~~~~~l~~~~ 203 (205)
T TIGR01454 135 DIVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLRKPQSLLALC 203 (205)
T ss_pred HHHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeCCHHHHHHHh
Confidence 33333322224 569999999999999999998533 231 333456777887 777776654
No 82
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=97.52 E-value=0.00087 Score=68.77 Aligned_cols=39 Identities=15% Similarity=0.201 Sum_probs=36.0
Q ss_pred cccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCc
Q 003740 662 RPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL 700 (799)
Q Consensus 662 R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~ 700 (799)
-+.++++|+.|+++|+.+.++||.....+..+.+++|+.
T Consensus 18 ~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 18 WQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred cHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 344899999999999999999999999999999999975
No 83
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=97.48 E-value=0.0007 Score=69.52 Aligned_cols=118 Identities=15% Similarity=0.237 Sum_probs=80.0
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccH
Q 003740 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (799)
Q Consensus 659 D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK 738 (799)
-++.||+.+.++.|++.|+++.++|+........+.+..||...-+.++.+.+.. ...|.-
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~------------------~~Kp~~- 151 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALASAEKLP------------------YSKPHP- 151 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccEEEEcccCC------------------CCCCCH-
Confidence 3568999999999999999999999999999999999999875433333332210 112322
Q ss_pred HHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCC---CHHHHHhcCC---ChHhHHH
Q 003740 739 HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAG---TEVELECCCF---NFSSRKT 796 (799)
Q Consensus 739 ~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~g---tevak~aaDi---nf~si~~ 796 (799)
.+.+.+.+++| +.+.|+||..||..|-+.|++....=..+ .+.-...+|+ +|..+..
T Consensus 152 -~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~dl~~ 217 (222)
T PRK10826 152 -EVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLESLTELTA 217 (222)
T ss_pred -HHHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheeccCHHHHhh
Confidence 23333333325 56899999999999999999754332122 2222334666 7777654
No 84
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.45 E-value=0.00099 Score=69.72 Aligned_cols=43 Identities=7% Similarity=0.034 Sum_probs=38.7
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCcc
Q 003740 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILT 701 (799)
Q Consensus 659 D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~ 701 (799)
+..-+.+.++|++|++.||.|++.||-.......+.+++|+..
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 3455679999999999999999999999999999999999853
No 85
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=97.44 E-value=0.00039 Score=73.47 Aligned_cols=121 Identities=13% Similarity=0.310 Sum_probs=79.3
Q ss_pred CCcccHHHHHHHHHh-CCCEEEEEcCCCHHHHHHHHHHcCCc--cCCce-ee--cchh----------------------
Q 003740 660 PMRPGVKESVAICRS-AGITVRMVTGDNINTAKAIARECGIL--TDNGI-AI--EGPE---------------------- 711 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~-aGI~v~mlTGD~~~tA~aiA~~~GI~--~~~~~-~~--~g~~---------------------- 711 (799)
.+-++++++|+.|++ .|+.+.++||........+.+.+++. ..++. +. .+..
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 445889999999998 79999999999999999888877642 22221 00 0000
Q ss_pred -----------------hhccC--HH---HH----hhhcCCceEE-----EecCc--ccHHHHHHHHHHhCC---CEEEE
Q 003740 712 -----------------FREKS--DE---EL----SKLIPKIQVM-----ARSSP--MDKHTLVKHLRTTLG---EVVAV 755 (799)
Q Consensus 712 -----------------~~~~~--~~---~~----~~~~~~~~v~-----ar~sP--~dK~~lV~~Lq~~~G---~vVa~ 755 (799)
++... ++ ++ .+..+...+. -...| .+|..-|+.+.+.+| ..|.+
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 00001 11 11 1111212211 12233 588888888877655 56889
Q ss_pred EcCCccCHHhhhcC----CeeeecCCCCCH
Q 003740 756 TGDGTNDAPALHEA----DIGLAMGIAGTE 781 (799)
Q Consensus 756 ~GDG~NDapAL~~A----dVGiamgi~gte 781 (799)
+||+.||-+|++.+ +.||+|| ++.+
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg-~a~~ 224 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVG-TGAT 224 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEEC-CCCC
Confidence 99999999999999 9999999 6543
No 86
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=97.40 E-value=0.00073 Score=68.76 Aligned_cols=117 Identities=19% Similarity=0.267 Sum_probs=78.2
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.||+.+.++.|++.|+++.++|+-+...+..+.+..|+...-..++.+.+. .+..|. ..
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~------------------~~~Kp~-p~ 145 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLIGGDSL------------------AQRKPH-PD 145 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEEecCCC------------------CCCCCC-hH
Confidence 57899999999999999999999999999999999999996432222222211 111221 12
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeee-c--CCCC-CHHHHHhcCC---ChHhHHH
Q 003740 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLA-M--GIAG-TEVELECCCF---NFSSRKT 796 (799)
Q Consensus 740 ~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGia-m--gi~g-tevak~aaDi---nf~si~~ 796 (799)
.+.+.+++. | +.++|+||..||..|.++|++-.. + |-.. .+.....+|. ++..+..
T Consensus 146 ~~~~~~~~~-~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~~~~~l~~ 211 (213)
T TIGR01449 146 PLLLAAERL-GVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYDSLNELPP 211 (213)
T ss_pred HHHHHHHHc-CCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeCCHHHHHh
Confidence 233333332 4 568899999999999999998543 2 2111 2333445776 6666654
No 87
>PLN02382 probable sucrose-phosphatase
Probab=97.35 E-value=0.0014 Score=73.63 Aligned_cols=125 Identities=21% Similarity=0.213 Sum_probs=84.7
Q ss_pred CcccHHHHH-HHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC------c-eeecchhhh-------------------
Q 003740 661 MRPGVKESV-AICRSAGITVRMVTGDNINTAKAIARECGILTDN------G-IAIEGPEFR------------------- 713 (799)
Q Consensus 661 ~R~~v~~aI-~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~------~-~~~~g~~~~------------------- 713 (799)
+.+....++ +++++.|+..+..||..+..+..+.++.++..+. + .+..+..+.
T Consensus 29 ~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~ 108 (413)
T PLN02382 29 LSLLRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIVV 108 (413)
T ss_pred hhHHHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhHH
Confidence 333344555 8899999999999999999999999999987652 1 011111000
Q ss_pred ----cc--------------------CH-------HHHhhhcC----CceE------EEecCc--ccHHHHHHHHHHhC-
Q 003740 714 ----EK--------------------SD-------EELSKLIP----KIQV------MARSSP--MDKHTLVKHLRTTL- 749 (799)
Q Consensus 714 ----~~--------------------~~-------~~~~~~~~----~~~v------~ar~sP--~dK~~lV~~Lq~~~- 749 (799)
.+ .+ +++.+.+. ++.+ +-...| ..|..-++.|.+++
T Consensus 109 ~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~ 188 (413)
T PLN02382 109 EETSKFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLK 188 (413)
T ss_pred HHHhcCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhh
Confidence 00 01 01111111 1221 113344 46999999998876
Q ss_pred --C---CEEEEEcCCccCHHhhhcCC-eeeecCCCCCHHHHHh
Q 003740 750 --G---EVVAVTGDGTNDAPALHEAD-IGLAMGIAGTEVELEC 786 (799)
Q Consensus 750 --G---~vVa~~GDG~NDapAL~~Ad-VGiamgi~gtevak~a 786 (799)
| ..|.++||+.||.+||+.|+ .||+|| ++.+..|+.
T Consensus 189 ~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~-NA~~elk~~ 230 (413)
T PLN02382 189 AEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVS-NAQEELLQW 230 (413)
T ss_pred hcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEc-CCcHHHHHH
Confidence 4 47899999999999999999 699999 999998874
No 88
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=97.33 E-value=0.00065 Score=72.08 Aligned_cols=116 Identities=17% Similarity=0.250 Sum_probs=78.6
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccH
Q 003740 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (799)
Q Consensus 659 D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK 738 (799)
.++.|++.++++.|++.|+++.++||-+...+..+..+.||....+.++.++ ..|..|
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~i~~~d----------------------~~~~~K 157 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRWIIGGD----------------------TLPQKK 157 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeEEEecC----------------------CCCCCC
Confidence 4678999999999999999999999999999999999999854222222222 122222
Q ss_pred --HHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCe-eee--cCC-CCCHHHHHhcCC---ChHhHHH
Q 003740 739 --HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADI-GLA--MGI-AGTEVELECCCF---NFSSRKT 796 (799)
Q Consensus 739 --~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdV-Gia--mgi-~gtevak~aaDi---nf~si~~ 796 (799)
..+++.+.+++| +.+.|+||+.||..+.+.|++ .+. -|- ...+..+..+|. ++..+.+
T Consensus 158 p~p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~~l~el~~ 227 (272)
T PRK13223 158 PDPAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVIDDLRALLP 227 (272)
T ss_pred CCcHHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEECCHHHHHH
Confidence 233333333324 578999999999999999997 333 331 122334456776 7766654
No 89
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=97.33 E-value=0.0012 Score=66.75 Aligned_cols=116 Identities=23% Similarity=0.389 Sum_probs=78.7
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcC--CccCCceee-c-chhh-h--------------c------
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECG--ILTDNGIAI-E-GPEF-R--------------E------ 714 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~G--I~~~~~~~~-~-g~~~-~--------------~------ 714 (799)
++.+.+.+++++|++.|+++.++||.....+..+.++++ +...++..+ . +... . .
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLPLPLIAENGALIFYPGEILYIEPSDVFEEILGIKEEIGAELK 96 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCCCCEEECCCcEEEECCEEEEEcccccHHHHHHhhhhcCceee
Confidence 477899999999999999999999999999999998754 233333111 0 1000 0 0
Q ss_pred -c-------------------------CHH---HHhhh-------cCCceEEE------ecCc--ccHHHHHHHHHHhCC
Q 003740 715 -K-------------------------SDE---ELSKL-------IPKIQVMA------RSSP--MDKHTLVKHLRTTLG 750 (799)
Q Consensus 715 -~-------------------------~~~---~~~~~-------~~~~~v~a------r~sP--~dK~~lV~~Lq~~~G 750 (799)
+ .+. ++.+. .+.+.+.. ...| .+|...++.+.+++|
T Consensus 97 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ev~p~~~~K~~~~~~~~~~~~ 176 (204)
T TIGR01484 97 SLSEHYVGTFIEDKAIAVAIHYVGAELGQELDSKMRERLEKIGRNDLELEAIYVGKTDLEVLPAGVDKGSALQALLKELN 176 (204)
T ss_pred eeccccccceeecccceeeEEEeccchhhHHHHHHHHHHHhhccccCcEEEEEecCCEEEEecCCCChHHHHHHHHHHhC
Confidence 0 000 00000 01222321 2234 799999999987755
Q ss_pred ---CEEEEEcCCccCHHhhhcCCeeeec
Q 003740 751 ---EVVAVTGDGTNDAPALHEADIGLAM 775 (799)
Q Consensus 751 ---~vVa~~GDG~NDapAL~~AdVGiam 775 (799)
..++++||+.||.+|++.+++|+||
T Consensus 177 ~~~~~~~~~GD~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 177 GKRDEILAFGDSGNDEEMFEVAGLAVAV 204 (204)
T ss_pred CCHHHEEEEcCCHHHHHHHHHcCCceEC
Confidence 5699999999999999999999998
No 90
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=97.31 E-value=0.00063 Score=69.42 Aligned_cols=118 Identities=21% Similarity=0.186 Sum_probs=78.7
Q ss_pred CcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHHH
Q 003740 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHT 740 (799)
Q Consensus 661 ~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~ 740 (799)
+.||+.+.++.|++.|+++.++||.....+..+-+..|+...-..++.+++. .+..| |-.
T Consensus 83 ~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i~~~~~~------------------~~~Kp--~p~ 142 (214)
T PRK13288 83 EYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVITLDDV------------------EHAKP--DPE 142 (214)
T ss_pred cCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeEEEecCcC------------------CCCCC--CcH
Confidence 6799999999999999999999999999999999999996532333322221 11122 122
Q ss_pred HHHHHHHhCC---CEEEEEcCCccCHHhhhcCCe---eeecCCCCC-HHHHHhcCC---ChHhHHHhh
Q 003740 741 LVKHLRTTLG---EVVAVTGDGTNDAPALHEADI---GLAMGIAGT-EVELECCCF---NFSSRKTYI 798 (799)
Q Consensus 741 lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdV---Giamgi~gt-evak~aaDi---nf~si~~~i 798 (799)
.++.+.+++| ..+.|+||..+|..|-++|++ |+.-|.... +.....+|. ++..+.+.+
T Consensus 143 ~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~~~~~l~~~i 210 (214)
T PRK13288 143 PVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLDKMSDLLAIV 210 (214)
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEECCHHHHHHHH
Confidence 2333322223 568999999999999999998 343341111 233445666 777776643
No 91
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=97.25 E-value=0.0015 Score=68.45 Aligned_cols=93 Identities=14% Similarity=0.161 Sum_probs=65.4
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCcee------ecchhhhccCHHHHhhhcCCceEEE
Q 003740 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIA------IEGPEFREKSDEELSKLIPKIQVMA 731 (799)
Q Consensus 658 ~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~------~~g~~~~~~~~~~~~~~~~~~~v~a 731 (799)
.-++|||+.+.++.|++.|+++.++||-....+..+.++.|+...+..+ ++.+. +..
T Consensus 119 ~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dG-----------------vlt 181 (277)
T TIGR01544 119 DVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDG-----------------VLK 181 (277)
T ss_pred CCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCC-----------------eEe
Confidence 3567999999999999999999999999999999999999996443222 21110 111
Q ss_pred e-----cCcccHHHHHHH-HHHhCC-----CEEEEEcCCccCHHhhh
Q 003740 732 R-----SSPMDKHTLVKH-LRTTLG-----EVVAVTGDGTNDAPALH 767 (799)
Q Consensus 732 r-----~sP~dK~~lV~~-Lq~~~G-----~vVa~~GDG~NDapAL~ 767 (799)
. +....|...+.. ..+.+| ..|.|+|||.||.+|..
T Consensus 182 G~~~P~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~ 228 (277)
T TIGR01544 182 GFKGPLIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMAD 228 (277)
T ss_pred CCCCCcccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhc
Confidence 1 111467665542 332223 57889999999999944
No 92
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=97.12 E-value=0.0023 Score=74.41 Aligned_cols=39 Identities=8% Similarity=0.195 Sum_probs=35.9
Q ss_pred cccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCc
Q 003740 662 RPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL 700 (799)
Q Consensus 662 R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~ 700 (799)
-+.+.++|+.|+++|+.++++||.....+..+++++|+.
T Consensus 435 ~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 435 YSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred CHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 356899999999999999999999999999999999974
No 93
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=97.06 E-value=0.0012 Score=66.54 Aligned_cols=94 Identities=18% Similarity=0.082 Sum_probs=66.8
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCccc
Q 003740 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (799)
Q Consensus 658 ~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~d 737 (799)
.+++.++++++++.|++.|+++.++||-....+..+-+.+|+...-..++.+++ +..+-.|+-
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~~~~-----------------~~~KP~p~~ 166 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIWMED-----------------CPPKPNPEP 166 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEeecC-----------------CCCCcCHHH
Confidence 455677889999999999999999999999999999999999653333333332 111223333
Q ss_pred HHHHHHHHHHhCCCEEEEEcCCccCHHhhhcC
Q 003740 738 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEA 769 (799)
Q Consensus 738 K~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~A 769 (799)
-....+.+.-. .+.+.|+||+.+|..|-++|
T Consensus 167 ~~~~~~~~~~~-~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 167 LILAAKALGVE-ACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHHHHHHhCcC-cccEEEEeCCHHHHHHHHhC
Confidence 23444444333 45789999999999887765
No 94
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=97.05 E-value=0.0031 Score=64.07 Aligned_cols=107 Identities=13% Similarity=0.125 Sum_probs=75.6
Q ss_pred CCcccHHHHHH-HHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccH
Q 003740 660 PMRPGVKESVA-ICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (799)
Q Consensus 660 ~~R~~v~~aI~-~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK 738 (799)
.++|++.+.|+ .+++.|++++++|+=....+..+|+..|+..... ++ |.+++.... .++ .-..|.-++|
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~~-~i-~t~le~~~g-------g~~-~g~~c~g~~K 163 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRLN-LI-ASQIERGNG-------GWV-LPLRCLGHEK 163 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccCc-EE-EEEeEEeCC-------ceE-cCccCCChHH
Confidence 46899999996 7888999999999999999999999966643222 22 222221000 000 1124667899
Q ss_pred HHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecC
Q 003740 739 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMG 776 (799)
Q Consensus 739 ~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamg 776 (799)
..-++..-....+..-+=||..||.|+|+.||-.++++
T Consensus 164 v~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 164 VAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVS 201 (210)
T ss_pred HHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEEC
Confidence 98887653221244568899999999999999999885
No 95
>PRK11590 hypothetical protein; Provisional
Probab=96.92 E-value=0.0054 Score=62.47 Aligned_cols=107 Identities=15% Similarity=0.103 Sum_probs=75.2
Q ss_pred CCcccHHHHH-HHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccH
Q 003740 660 PMRPGVKESV-AICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (799)
Q Consensus 660 ~~R~~v~~aI-~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK 738 (799)
+++|++.+.| +.+++.|+++.++|+-....+..+++.+|+..... ++ |.+++. ..-.++ .-..|..+.|
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~~-~i-~t~l~~-------~~tg~~-~g~~c~g~~K 164 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRVN-LI-ASQMQR-------RYGGWV-LTLRCLGHEK 164 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccCc-eE-EEEEEE-------EEccEE-CCccCCChHH
Confidence 4489999999 57888999999999999999999999999632111 22 222211 000000 1123667899
Q ss_pred HHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecC
Q 003740 739 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMG 776 (799)
Q Consensus 739 ~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamg 776 (799)
...++..-.......-+=||..||.|+|+.|+-.++++
T Consensus 165 ~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vn 202 (211)
T PRK11590 165 VAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVT 202 (211)
T ss_pred HHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEEC
Confidence 98887653211344557899999999999999999886
No 96
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=96.89 E-value=0.0033 Score=64.94 Aligned_cols=119 Identities=16% Similarity=0.080 Sum_probs=78.1
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcc--c
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM--D 737 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~--d 737 (799)
++.||+.+.++.|++.|+++.++|+.+...+..+-+..|+...-..++.+.+. .+.-|. -
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~------------------~~~KP~p~~ 156 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIGGDTL------------------AERKPHPLP 156 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccEEEecCcC------------------CCCCCCHHH
Confidence 56899999999999999999999999999988888999986532233322211 111221 1
Q ss_pred HHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeee---cCCC-CC-HHHHHhcCC---ChHhHHHh
Q 003740 738 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA---MGIA-GT-EVELECCCF---NFSSRKTY 797 (799)
Q Consensus 738 K~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGia---mgi~-gt-evak~aaDi---nf~si~~~ 797 (799)
=..+++.+.-. .+.+.|+||+.||..|-+.|++-.. -|-. .. +.....+|. ++..+.+.
T Consensus 157 ~~~~~~~l~~~-p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~~~~el~~~ 223 (229)
T PRK13226 157 LLVAAERIGVA-PTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVEQPQLLWNP 223 (229)
T ss_pred HHHHHHHhCCC-hhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeCCHHHHHHH
Confidence 12233333222 3669999999999999999987532 2311 11 223345777 77777653
No 97
>PTZ00174 phosphomannomutase; Provisional
Probab=96.85 E-value=0.0062 Score=63.65 Aligned_cols=51 Identities=22% Similarity=0.231 Sum_probs=43.1
Q ss_pred ccHHHHHHHHHHhCCCEEEEEcC----CccCHHhhhcC-CeeeecCCCCCHHHHHhcC
Q 003740 736 MDKHTLVKHLRTTLGEVVAVTGD----GTNDAPALHEA-DIGLAMGIAGTEVELECCC 788 (799)
Q Consensus 736 ~dK~~lV~~Lq~~~G~vVa~~GD----G~NDapAL~~A-dVGiamgi~gtevak~aaD 788 (799)
-+|..-|+.|.+. -+-|+++|| |-||.+||+.| -.|++.+ ++.|..|..+.
T Consensus 187 vsKg~al~~L~~~-~~eviafGD~~~~~~NDieMl~~~~~~g~~v~-n~~~~~~~~~~ 242 (247)
T PTZ00174 187 WDKTYCLRHLEND-FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK-NPEDTIKILKE 242 (247)
T ss_pred CcHHHHHHHHHhh-hhhEEEEcccCCCCCCcHhhhhcCCCceEEeC-CHHHHHHHHHH
Confidence 5788888888777 678999999 99999999976 6788888 99998887764
No 98
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=96.84 E-value=0.0032 Score=64.92 Aligned_cols=86 Identities=20% Similarity=0.261 Sum_probs=62.6
Q ss_pred cccHHHHHHHHHhCCCEEEEEcCC----CHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCccc
Q 003740 662 RPGVKESVAICRSAGITVRMVTGD----NINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (799)
Q Consensus 662 R~~v~~aI~~l~~aGI~v~mlTGD----~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~d 737 (799)
.+++++.++.+++.|+++.++|+- ...++..+.+.+||......++.+++.. .-.| +
T Consensus 116 ~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~------------------~~Kp-~ 176 (237)
T TIGR01672 116 KEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPG------------------QYQY-T 176 (237)
T ss_pred hhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCC------------------CCCC-C
Confidence 445999999999999999999997 7779999999999965333333333211 0112 3
Q ss_pred HHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCe
Q 003740 738 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI 771 (799)
Q Consensus 738 K~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdV 771 (799)
|. ..+++. | ++.|+||..||..+-++|.+
T Consensus 177 ~~---~~l~~~-~-i~i~vGDs~~DI~aAk~AGi 205 (237)
T TIGR01672 177 KT---QWIQDK-N-IRIHYGDSDNDITAAKEAGA 205 (237)
T ss_pred HH---HHHHhC-C-CeEEEeCCHHHHHHHHHCCC
Confidence 43 344444 5 57899999999999999876
No 99
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=96.81 E-value=0.0043 Score=65.75 Aligned_cols=114 Identities=18% Similarity=0.237 Sum_probs=77.7
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.||+.+.++.|++.|+++.++|+.+...+..+-+.+||...-..++.+++ .+ .|.
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~vi~~~~----------------------~~-~k~ 198 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSVVQAGTP----------------------IL-SKR 198 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEEEEecCC----------------------CC-CCH
Confidence 4679999999999999999999999999999999999999653222222221 11 133
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeee---cCCCCCH--HHHHhcCC---ChHhHHHh
Q 003740 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLA---MGIAGTE--VELECCCF---NFSSRKTY 797 (799)
Q Consensus 740 ~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGia---mgi~gte--vak~aaDi---nf~si~~~ 797 (799)
...+.+.+++| +.++|+||+.+|..|-++|++-.. -| ..+. .....+|. ++..+...
T Consensus 199 ~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g-~~~~~~l~~~~ad~~i~~~~eL~~~ 266 (273)
T PRK13225 199 RALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWG-FNDRQSLVAACPDWLLETPSDLLQA 266 (273)
T ss_pred HHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecC-CCCHHHHHHCCCCEEECCHHHHHHH
Confidence 33333322213 568999999999999999988532 23 2222 23345677 66666553
No 100
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=96.81 E-value=0.0064 Score=62.19 Aligned_cols=120 Identities=24% Similarity=0.355 Sum_probs=81.7
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCc--cCCceeecchhhhccCHHHHhhhcCCceEEEecCcc
Q 003740 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL--TDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM 736 (799)
Q Consensus 659 D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~ 736 (799)
.++.||+.+.++.|++.|+++.++|+-....+..+.+..|+. ..-..++.+.+.. +.-|.
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~------------------~~KP~ 147 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVA------------------AGRPA 147 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCC------------------CCCCC
Confidence 478999999999999999999999999999999999999986 4333444333311 12231
Q ss_pred cHHHHHHHHHHhCC----CEEEEEcCCccCHHhhhcCCeeeecC-CCCCH----HHHHhcCC---ChHhHHHhh
Q 003740 737 DKHTLVKHLRTTLG----EVVAVTGDGTNDAPALHEADIGLAMG-IAGTE----VELECCCF---NFSSRKTYI 798 (799)
Q Consensus 737 dK~~lV~~Lq~~~G----~vVa~~GDG~NDapAL~~AdVGiamg-i~gte----vak~aaDi---nf~si~~~i 798 (799)
-..+-+.+++. | +.+.|+||+.+|..|-+.|++..+++ ..|.. .....+|. +++.+...+
T Consensus 148 -p~~~~~a~~~~-~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i~~~~~l~~~~ 219 (220)
T TIGR03351 148 -PDLILRAMELT-GVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVLDSVADLPALL 219 (220)
T ss_pred -HHHHHHHHHHc-CCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceeecCHHHHHHhh
Confidence 12233344433 4 46999999999999999999986322 13322 22234553 777766543
No 101
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=96.66 E-value=0.011 Score=61.86 Aligned_cols=92 Identities=21% Similarity=0.267 Sum_probs=69.2
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC-ceeecchhhhccCHHHHhhhcCCceEEEecCcccH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK 738 (799)
++.||+.+.++.|++.|+++.++||.....+..+-+..|+.... +.++.+++. .+.-| +.
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~~~~------------------~~~KP-~p 159 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTTDDV------------------PAGRP-AP 159 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEccccC------------------CCCCC-CH
Confidence 45789999999999999999999999999999999999986532 333333321 11233 33
Q ss_pred HHHHHHHHHhCC----CEEEEEcCCccCHHhhhcCCe
Q 003740 739 HTLVKHLRTTLG----EVVAVTGDGTNDAPALHEADI 771 (799)
Q Consensus 739 ~~lV~~Lq~~~G----~vVa~~GDG~NDapAL~~AdV 771 (799)
.-+.+.+++. | +.+.|+||..+|..|-+.|++
T Consensus 160 ~~~~~a~~~l-~~~~~~~~l~IGDs~~Di~aA~~aGi 195 (253)
T TIGR01422 160 WMALKNAIEL-GVYDVAACVKVGDTVPDIEEGRNAGM 195 (253)
T ss_pred HHHHHHHHHc-CCCCchheEEECCcHHHHHHHHHCCC
Confidence 4455556555 5 348999999999999999996
No 102
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=96.63 E-value=0.012 Score=62.33 Aligned_cols=97 Identities=16% Similarity=0.188 Sum_probs=69.3
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC-ceeecchhhhccCHHHHhhhcCCceEEEecCcccH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK 738 (799)
++-||+.+.++.|++.|+++.++||.....+..+-+..|+.... +.++.+++. ...-| +.
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~~~~------------------~~~KP-~p 161 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTTDDV------------------PAGRP-YP 161 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcCCcC------------------CCCCC-Ch
Confidence 45789999999999999999999999999988888888775421 223222221 11123 23
Q ss_pred HHHHHHHHHhCC----CEEEEEcCCccCHHhhhcCCe---eeecC
Q 003740 739 HTLVKHLRTTLG----EVVAVTGDGTNDAPALHEADI---GLAMG 776 (799)
Q Consensus 739 ~~lV~~Lq~~~G----~vVa~~GDG~NDapAL~~AdV---Giamg 776 (799)
.-+.+.+++. | +.+.|+||..+|..|-+.|++ |+.-|
T Consensus 162 ~~~~~a~~~l-~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g 205 (267)
T PRK13478 162 WMALKNAIEL-GVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILS 205 (267)
T ss_pred HHHHHHHHHc-CCCCCcceEEEcCcHHHHHHHHHCCCEEEEEccC
Confidence 4455555554 4 358999999999999999996 55544
No 103
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=96.59 E-value=0.0056 Score=64.43 Aligned_cols=93 Identities=16% Similarity=0.243 Sum_probs=69.6
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.||+.+.++.|++.|+++.++|+-....+..+-+.+||...-..++.+.+.. +..|. -.
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~~~d~~------------------~~KP~-Pe 169 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAAEDVY------------------RGKPD-PE 169 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEecccCC------------------CCCCC-HH
Confidence 468999999999999999999999999999999999999976444555554421 11221 12
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCee
Q 003740 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG 772 (799)
Q Consensus 740 ~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVG 772 (799)
-+...+++. | +.++|+||..+|..|-+.|++-
T Consensus 170 ~~~~a~~~l-~~~p~~~l~IgDs~~Di~aA~~aG~~ 204 (260)
T PLN03243 170 MFMYAAERL-GFIPERCIVFGNSNSSVEAAHDGCMK 204 (260)
T ss_pred HHHHHHHHh-CCChHHeEEEcCCHHHHHHHHHcCCE
Confidence 223333333 4 5689999999999999999983
No 104
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=96.52 E-value=0.015 Score=54.17 Aligned_cols=89 Identities=20% Similarity=0.223 Sum_probs=63.4
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEEcCCC--------HHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEE
Q 003740 659 DPMRPGVKESVAICRSAGITVRMVTGDN--------INTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVM 730 (799)
Q Consensus 659 D~~R~~v~~aI~~l~~aGI~v~mlTGD~--------~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ 730 (799)
-++.|++.++++.|+++|+++.++|+.. .....++.+.+|+... .. ++
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~-~~-----------------------~~ 79 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPID-VL-----------------------YA 79 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEE-EE-----------------------EE
Confidence 3678999999999999999999999998 7788889999998521 00 11
Q ss_pred EecCcccHHHHHHHHHHhCC----CEEEEEcC-CccCHHhhhcCCe
Q 003740 731 ARSSPMDKHTLVKHLRTTLG----EVVAVTGD-GTNDAPALHEADI 771 (799)
Q Consensus 731 ar~sP~dK~~lV~~Lq~~~G----~vVa~~GD-G~NDapAL~~AdV 771 (799)
+...+.-|-.+++.+.++++ +.+.|+|| -.+|..+-+.|++
T Consensus 80 ~~~~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi 125 (132)
T TIGR01662 80 CPHCRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGL 125 (132)
T ss_pred CCCCCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCC
Confidence 10011223344444444432 67999999 5899999998876
No 105
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=96.49 E-value=0.0066 Score=62.57 Aligned_cols=85 Identities=21% Similarity=0.306 Sum_probs=63.4
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCC----CHHHHHHHHHHcCCc--cCCceeecchhhhccCHHHHhhhcCCceEEEec
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGD----NINTAKAIARECGIL--TDNGIAIEGPEFREKSDEELSKLIPKIQVMARS 733 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD----~~~tA~aiA~~~GI~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~ 733 (799)
.+.|++++.++.+++.|+++.++||. ...|+..+.+..||. ..... +++..
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~v-----------------------il~gd 170 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPV-----------------------IFAGD 170 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeE-----------------------EEcCC
Confidence 36788999999999999999999995 467999999999994 22122 23322
Q ss_pred Cc--ccHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCee
Q 003740 734 SP--MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG 772 (799)
Q Consensus 734 sP--~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVG 772 (799)
++ .+|.. .+++. | ++.|+||..+|..|-++|++-
T Consensus 171 ~~~K~~K~~---~l~~~-~-i~I~IGDs~~Di~aA~~AGi~ 206 (237)
T PRK11009 171 KPGQYTKTQ---WLKKK-N-IRIFYGDSDNDITAAREAGAR 206 (237)
T ss_pred CCCCCCHHH---HHHhc-C-CeEEEcCCHHHHHHHHHcCCc
Confidence 22 45554 44444 5 488999999999999999873
No 106
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=96.44 E-value=0.0085 Score=60.21 Aligned_cols=93 Identities=12% Similarity=0.196 Sum_probs=66.9
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.||+.++++.|++.|+++.++|+-+......+.+.+||...-+.++..++. ....|. ..
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~------------------~~~KP~-~~ 152 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAVLSADAV------------------RAYKPA-PQ 152 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhheeEehhhc------------------CCCCCC-HH
Confidence 46899999999999999999999999999999999999985433333333321 122332 22
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCee
Q 003740 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG 772 (799)
Q Consensus 740 ~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVG 772 (799)
-+-..+++. | +.+.|+||+.+|..+-++|++-
T Consensus 153 ~~~~~~~~~-~~~p~~~~~vgD~~~Di~~A~~~G~~ 187 (198)
T TIGR01428 153 VYQLALEAL-GVPPDEVLFVASNPWDLGGAKKFGFK 187 (198)
T ss_pred HHHHHHHHh-CCChhhEEEEeCCHHHHHHHHHCCCc
Confidence 233333333 4 5688999999999998888874
No 107
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=96.36 E-value=0.024 Score=68.77 Aligned_cols=152 Identities=19% Similarity=0.269 Sum_probs=92.9
Q ss_pred HHHHHHHHHHhccceeeEEEEEcCCCCCCCCCCCCCcceeeeeecc--cCCCcccHHHHHHHHHh-CCCEEEEEcCCCHH
Q 003740 612 LNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGI--KDPMRPGVKESVAICRS-AGITVRMVTGDNIN 688 (799)
Q Consensus 612 ~~~~~~~~a~~g~r~l~~a~~~~~~~~~~~~~~~~~~~~~lg~~~~--~D~~R~~v~~aI~~l~~-aGI~v~mlTGD~~~ 688 (799)
++.....|.....|.+++- -|.|++....- ...+-+++.++++.|.+ .|+.|+++||....
T Consensus 480 ~~~~~~~y~~~~~rLi~~D----------------~DGTL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~ 543 (726)
T PRK14501 480 AEEIIARYRAASRRLLLLD----------------YDGTLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRD 543 (726)
T ss_pred HHHHHHHHHhccceEEEEe----------------cCccccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHH
Confidence 4455666666666777663 34455443211 12367899999999999 69999999999999
Q ss_pred HHHHHHHHcCC--ccCCceeec--chhhhcc-----------------------------------------CH------
Q 003740 689 TAKAIARECGI--LTDNGIAIE--GPEFREK-----------------------------------------SD------ 717 (799)
Q Consensus 689 tA~aiA~~~GI--~~~~~~~~~--g~~~~~~-----------------------------------------~~------ 717 (799)
.........++ ..+++..+. |.++... ++
T Consensus 544 ~l~~~~~~~~l~liaenG~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~ 623 (726)
T PRK14501 544 TLERWFGDLPIHLVAEHGAWSRAPGGEWQLLEPVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPELGEAR 623 (726)
T ss_pred HHHHHhCCCCeEEEEeCCEEEeCCCCceEECCCcchhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHHHHHH
Confidence 88887665553 223331111 1111000 00
Q ss_pred -HHHh----hhcC--CceEEE-----ecCc--ccHHHHHHHHHHhC-CCEEEEEcCCccCHHhhhcC---CeeeecCCCC
Q 003740 718 -EELS----KLIP--KIQVMA-----RSSP--MDKHTLVKHLRTTL-GEVVAVTGDGTNDAPALHEA---DIGLAMGIAG 779 (799)
Q Consensus 718 -~~~~----~~~~--~~~v~a-----r~sP--~dK~~lV~~Lq~~~-G~vVa~~GDG~NDapAL~~A---dVGiamgi~g 779 (799)
+++. ..+. .+.+.. ...| -+|...++.+.+.. -..|+++||+.||.+|++.+ ..+++|| ++
T Consensus 624 a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG-~~ 702 (726)
T PRK14501 624 ANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVG-PG 702 (726)
T ss_pred HHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEEC-CC
Confidence 0111 1111 122211 1223 68999999888652 25899999999999999996 5899999 64
Q ss_pred C
Q 003740 780 T 780 (799)
Q Consensus 780 t 780 (799)
.
T Consensus 703 ~ 703 (726)
T PRK14501 703 E 703 (726)
T ss_pred C
Confidence 3
No 108
>PRK06769 hypothetical protein; Validated
Probab=96.34 E-value=0.016 Score=57.07 Aligned_cols=105 Identities=18% Similarity=0.079 Sum_probs=62.8
Q ss_pred CcceeeeeecccC----CCcccHHHHHHHHHhCCCEEEEEcCCCHH--------HHHHHHHHcCCccCCceeec----ch
Q 003740 647 EGYTCIGIVGIKD----PMRPGVKESVAICRSAGITVRMVTGDNIN--------TAKAIARECGILTDNGIAIE----GP 710 (799)
Q Consensus 647 ~~~~~lg~~~~~D----~~R~~v~~aI~~l~~aGI~v~mlTGD~~~--------tA~aiA~~~GI~~~~~~~~~----g~ 710 (799)
.|.++.|...+.+ ++-||+++.++.|++.|+++.++|+.... .....-+..|+..- ... ++
T Consensus 11 ~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~---~~~~~~~~~ 87 (173)
T PRK06769 11 RDGTIGGDTTIHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDI---YLCPHKHGD 87 (173)
T ss_pred CCCcccCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEE---EECcCCCCC
Confidence 4555555544333 26799999999999999999999987631 22333445565320 000 00
Q ss_pred hhhccCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeee
Q 003740 711 EFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLA 774 (799)
Q Consensus 711 ~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGia 774 (799)
+ ....-|.- ..+-+.+++. | +-+.|+||..+|..|-++|++-..
T Consensus 88 ~------------------~~~~KP~p-~~~~~~~~~l-~~~p~~~i~IGD~~~Di~aA~~aGi~~i 134 (173)
T PRK06769 88 G------------------CECRKPST-GMLLQAAEKH-GLDLTQCAVIGDRWTDIVAAAKVNATTI 134 (173)
T ss_pred C------------------CCCCCCCH-HHHHHHHHHc-CCCHHHeEEEcCCHHHHHHHHHCCCeEE
Confidence 0 00112211 2222333332 4 569999999999999999998543
No 109
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=96.29 E-value=0.008 Score=62.86 Aligned_cols=96 Identities=17% Similarity=0.105 Sum_probs=68.8
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.||+.+.++.|++.|+++.++|+-....+..+-+..||...-+.++.+++... ..-.|+-=.
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv~~~~~~~----------------~KP~p~~~~ 171 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIGSECEH----------------AKPHPDPYL 171 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEEecCcCCC----------------CCCChHHHH
Confidence 4688999999999999999999999999999999999999754444544444210 111121112
Q ss_pred HHHHHHHHhCCCEEEEEcCCccCHHhhhcCCee
Q 003740 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG 772 (799)
Q Consensus 740 ~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVG 772 (799)
...+.+.-. .+.+.|+||..+|..|-++|++-
T Consensus 172 ~a~~~~~~~-~~~~l~vgDs~~Di~aA~~aGi~ 203 (248)
T PLN02770 172 KALEVLKVS-KDHTFVFEDSVSGIKAGVAAGMP 203 (248)
T ss_pred HHHHHhCCC-hhHEEEEcCCHHHHHHHHHCCCE
Confidence 222323222 35689999999999999999974
No 110
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=96.28 E-value=0.0092 Score=57.14 Aligned_cols=100 Identities=23% Similarity=0.251 Sum_probs=72.9
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcC----CccC----Cc--eeecchhhhccCHHHHhhhcCCceE
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECG----ILTD----NG--IAIEGPEFREKSDEELSKLIPKIQV 729 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~G----I~~~----~~--~~~~g~~~~~~~~~~~~~~~~~~~v 729 (799)
.++|+-++.++.|++.+++++++|+--.--...+=...+ |..- +. ...+|+-. .+
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~---------------i~ 137 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHS---------------IK 137 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCcee---------------ee
Confidence 468999999999999999999999887777777766665 3210 00 11111111 11
Q ss_pred EEecCc--ccHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeec
Q 003740 730 MARSSP--MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAM 775 (799)
Q Consensus 730 ~ar~sP--~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiam 775 (799)
.-..+| .||...|+.|++. .+.+-|+|||+.|..|-+.+|+=+|=
T Consensus 138 ~~~ds~fG~dK~~vI~~l~e~-~e~~fy~GDsvsDlsaaklsDllFAK 184 (220)
T COG4359 138 YTDDSQFGHDKSSVIHELSEP-NESIFYCGDSVSDLSAAKLSDLLFAK 184 (220)
T ss_pred cCCccccCCCcchhHHHhhcC-CceEEEecCCcccccHhhhhhhHhhH
Confidence 111222 6899999999998 89999999999999999999987753
No 111
>PRK11587 putative phosphatase; Provisional
Probab=96.25 E-value=0.016 Score=59.18 Aligned_cols=96 Identities=17% Similarity=0.210 Sum_probs=67.0
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.||+.+.++.|++.|+++.++|+.....+...-+..|+.. ...++.+++. .+.-|. -.
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~-~~~i~~~~~~------------------~~~KP~-p~ 142 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPA-PEVFVTAERV------------------KRGKPE-PD 142 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCC-ccEEEEHHHh------------------cCCCCC-cH
Confidence 468999999999999999999999998877777777788732 2233333321 122332 22
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCee-eecC
Q 003740 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG-LAMG 776 (799)
Q Consensus 740 ~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVG-iamg 776 (799)
-+...+++. | +.+.|+||..+|..|-+.|++- +.+.
T Consensus 143 ~~~~~~~~~-g~~p~~~l~igDs~~di~aA~~aG~~~i~v~ 182 (218)
T PRK11587 143 AYLLGAQLL-GLAPQECVVVEDAPAGVLSGLAAGCHVIAVN 182 (218)
T ss_pred HHHHHHHHc-CCCcccEEEEecchhhhHHHHHCCCEEEEEC
Confidence 333344433 4 6789999999999999999983 4444
No 112
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=96.21 E-value=0.019 Score=65.79 Aligned_cols=118 Identities=14% Similarity=0.094 Sum_probs=79.0
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.||+.+.++.|++.|+++.++|+-....+..+-+.+|+...-..++.+++. .....|+
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~~~d~v-----------------~~~~kP~--- 389 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETFSIEQI-----------------NSLNKSD--- 389 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeEecCCC-----------------CCCCCcH---
Confidence 67899999999999999999999999999999999999997543344444331 1112232
Q ss_pred HHHHHHHHhCCCEEEEEcCCccCHHhhhcCCe-eeecCC-CCCHHHHHhcCC---ChHhHHHh
Q 003740 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADI-GLAMGI-AGTEVELECCCF---NFSSRKTY 797 (799)
Q Consensus 740 ~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdV-Giamgi-~gtevak~aaDi---nf~si~~~ 797 (799)
-+...+++.--+.+.|+||..+|..|-+.|++ .|...- .+.+-....+|. +++.+...
T Consensus 390 ~~~~al~~l~~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~~l~el~~~ 452 (459)
T PRK06698 390 LVKSILNKYDIKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVIDDLLELKGI 452 (459)
T ss_pred HHHHHHHhcCcceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeCCHHHHHHH
Confidence 22333332212568999999999999999997 333320 222212234566 66666554
No 113
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=96.16 E-value=0.0066 Score=60.10 Aligned_cols=91 Identities=14% Similarity=0.262 Sum_probs=63.2
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.||+.++++.|+++|+++.++|+.. .+..+.+.+|+...-+.++.+.+. .+.-| +..
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~--~~~~~l~~~~l~~~f~~~~~~~~~------------------~~~kp-~p~ 145 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASK--NAPTVLEKLGLIDYFDAIVDPAEI------------------KKGKP-DPE 145 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCc--cHHHHHHhcCcHhhCcEEEehhhc------------------CCCCC-ChH
Confidence 567999999999999999999999743 245678888986543344433331 12233 233
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCee
Q 003740 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG 772 (799)
Q Consensus 740 ~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVG 772 (799)
-+-+.+++. | +.+.|+||..+|..+-+.|++-
T Consensus 146 ~~~~~~~~~-~~~~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 146 IFLAAAEGL-GVSPSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred HHHHHHHHc-CCCHHHeEEEecCHHHHHHHHHcCCE
Confidence 333444433 4 4588999999999999999874
No 114
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=96.15 E-value=0.014 Score=59.84 Aligned_cols=113 Identities=23% Similarity=0.352 Sum_probs=75.0
Q ss_pred CCcccHHHHHHHH--HhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCc-eEEEecCc-
Q 003740 660 PMRPGVKESVAIC--RSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKI-QVMARSSP- 735 (799)
Q Consensus 660 ~~R~~v~~aI~~l--~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~v~ar~sP- 735 (799)
|+-|+.+++++.| ++.|+.++++|-=|..--..|=+.-|+...-..+++-+-.- .+.....+.|.. .-+.++.|
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~--~~~G~l~v~pyh~h~C~~C~~N 148 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACF--DADGRLRVRPYHSHGCSLCPPN 148 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCcee--cCCceEEEeCccCCCCCcCCCc
Confidence 6688999999999 56899999999999999999999999864322222221100 000011111111 11335555
Q ss_pred ccHHHHHHHHHHh---CC---CEEEEEcCCccC-HHhh--hcCCeeee
Q 003740 736 MDKHTLVKHLRTT---LG---EVVAVTGDGTND-APAL--HEADIGLA 774 (799)
Q Consensus 736 ~dK~~lV~~Lq~~---~G---~vVa~~GDG~ND-apAL--~~AdVGia 774 (799)
.=|..+++.+++. .| ..|.++|||.|| +|++ +.+|+-++
T Consensus 149 mCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~~ 196 (234)
T PF06888_consen 149 MCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVFP 196 (234)
T ss_pred cchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEec
Confidence 4899999998865 24 689999999999 4554 46776553
No 115
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=96.13 E-value=0.018 Score=59.21 Aligned_cols=93 Identities=12% Similarity=0.098 Sum_probs=66.3
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.||+.+.++.|++.|+++.++|+-+...+...-+..|+...-+.++.+.++ .+..|. -
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~iv~s~~~------------------~~~KP~--p 152 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTF------------------GYPKED--Q 152 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCEEEEeeeC------------------CCCCCC--H
Confidence 56899999999999999999999999988888888889986432333322221 112231 2
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCee
Q 003740 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG 772 (799)
Q Consensus 740 ~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVG 772 (799)
.+.+...+++| +.+.|+||..+|..+-+.|++.
T Consensus 153 ~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~ 188 (224)
T PRK14988 153 RLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIR 188 (224)
T ss_pred HHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCe
Confidence 33333322224 5689999999999999999985
No 116
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=96.05 E-value=0.034 Score=53.70 Aligned_cols=102 Identities=18% Similarity=0.259 Sum_probs=68.3
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHH---HHHHHc---C--CccCCceee-cchhhhccCHHHHhhhcCCce
Q 003740 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAK---AIAREC---G--ILTDNGIAI-EGPEFREKSDEELSKLIPKIQ 728 (799)
Q Consensus 658 ~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~---aiA~~~---G--I~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~ 728 (799)
+|.+.|+++++++.+++.|+++.++||.....+. ....++ | +.. ..++. .|..+..+. + .
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~-g~li~~~g~~~~~~~---------~-e 93 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH-GPVLLSPDRLFAALH---------R-E 93 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC-ceEEEcCCcchhhhh---------c-c
Confidence 5788999999999999999999999999988874 455552 3 321 11221 122111000 0 0
Q ss_pred EEEecCccc-HHHHHHHHHHhC----CCEEEEEcCCccCHHhhhcCCe
Q 003740 729 VMARSSPMD-KHTLVKHLRTTL----GEVVAVTGDGTNDAPALHEADI 771 (799)
Q Consensus 729 v~ar~sP~d-K~~lV~~Lq~~~----G~vVa~~GDG~NDapAL~~AdV 771 (799)
+. ...|+. |...++.+++.+ ...++..||+.+|+.|-++++|
T Consensus 94 ~i-~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi 140 (157)
T smart00775 94 VI-SKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGI 140 (157)
T ss_pred cc-cCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCC
Confidence 22 223444 888888888731 4788899999999999887765
No 117
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=96.04 E-value=0.012 Score=61.45 Aligned_cols=46 Identities=30% Similarity=0.416 Sum_probs=38.0
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecCCCCCHH
Q 003740 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEV 782 (799)
Q Consensus 736 ~dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamgi~gtev 782 (799)
..|..-|+.|++++| +.|.++||..||.+||..++-||.+| ++.+.
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~-Na~~e 212 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVG-NAQPE 212 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-T-TS-HH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEc-CCCHH
Confidence 679999999988865 35777999999999999999999999 87776
No 118
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=95.89 E-value=0.017 Score=56.14 Aligned_cols=95 Identities=20% Similarity=0.249 Sum_probs=67.2
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccH
Q 003740 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (799)
Q Consensus 659 D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK 738 (799)
.++.|++.+.++.|++.|+++.++|+-.........+.+|+...-+.++...+.. ...|. .
T Consensus 76 ~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~~~~~~------------------~~Kp~-~ 136 (176)
T PF13419_consen 76 LQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEIISSDDVG------------------SRKPD-P 136 (176)
T ss_dssp EEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEEGGGSS------------------SSTTS-H
T ss_pred cchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccccccccchhh------------------hhhhH-H
Confidence 3568999999999999999999999999999999999999974333333333211 01121 1
Q ss_pred HHHHHHHHHh--CCCEEEEEcCCccCHHhhhcCCee
Q 003740 739 HTLVKHLRTT--LGEVVAVTGDGTNDAPALHEADIG 772 (799)
Q Consensus 739 ~~lV~~Lq~~--~G~vVa~~GDG~NDapAL~~AdVG 772 (799)
..+-+.+++. ..+.+.|+||..+|..+-++|++-
T Consensus 137 ~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 137 DAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp HHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSE
T ss_pred HHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCe
Confidence 1222223222 146799999999999999988864
No 119
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=95.87 E-value=0.018 Score=56.74 Aligned_cols=92 Identities=17% Similarity=0.222 Sum_probs=61.5
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.|++.+.++.|++.|+++.++|+-.... ..+..++|+...-+.++.+.+. ....|. ..
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~~~~~~------------------~~~KP~-~~ 144 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVIFSGDV------------------GRGKPD-PD 144 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEEEcCCC------------------CCCCCC-HH
Confidence 678999999999999999999999988877 6666668986432333322221 111221 12
Q ss_pred HHHHHHHHh--CCCEEEEEcCCccCHHhhhcCCe
Q 003740 740 TLVKHLRTT--LGEVVAVTGDGTNDAPALHEADI 771 (799)
Q Consensus 740 ~lV~~Lq~~--~G~vVa~~GDG~NDapAL~~AdV 771 (799)
.+-+.+++. ....+.|+||...|..+-++|++
T Consensus 145 ~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~ 178 (183)
T TIGR01509 145 IYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGM 178 (183)
T ss_pred HHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCC
Confidence 222223222 13678899999999999888876
No 120
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=95.86 E-value=0.039 Score=52.46 Aligned_cols=105 Identities=17% Similarity=0.252 Sum_probs=75.6
Q ss_pred HHHHHHhccceeeEEEEEcCCCCCCCCCCCCCcceeeeeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHH
Q 003740 616 IEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAR 695 (799)
Q Consensus 616 ~~~~a~~g~r~l~~a~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~ 695 (799)
.+.+.++|++++.+- -|-|+++.= ....-|++++-+++++.+|+++.++|.-++..+..++.
T Consensus 20 ~~~L~~~Gikgvi~D----------------lDNTLv~wd--~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~ 81 (175)
T COG2179 20 PDILKAHGIKGVILD----------------LDNTLVPWD--NPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAE 81 (175)
T ss_pred HHHHHHcCCcEEEEe----------------ccCceeccc--CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhh
Confidence 356678899988762 223333321 23456899999999999999999999999999999999
Q ss_pred HcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhCC---CEEEEEcCCc-cCHHhhh
Q 003740 696 ECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLG---EVVAVTGDGT-NDAPALH 767 (799)
Q Consensus 696 ~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~lV~~Lq~~~G---~vVa~~GDG~-NDapAL~ 767 (799)
.+|+.- ++--.-|.- ..+-+++++. + +.|+|+||-. -|.-+=+
T Consensus 82 ~l~v~f---------------------------i~~A~KP~~-~~fr~Al~~m-~l~~~~vvmVGDqL~TDVlggn 128 (175)
T COG2179 82 KLGVPF---------------------------IYRAKKPFG-RAFRRALKEM-NLPPEEVVMVGDQLFTDVLGGN 128 (175)
T ss_pred hcCCce---------------------------eecccCccH-HHHHHHHHHc-CCChhHEEEEcchhhhhhhccc
Confidence 999963 333334443 4667788776 5 6899999974 3554433
No 121
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=95.82 E-value=0.015 Score=57.54 Aligned_cols=92 Identities=17% Similarity=0.236 Sum_probs=62.6
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccH
Q 003740 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (799)
Q Consensus 659 D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK 738 (799)
-++.||+.+.++.|++.|+++.++|+- ..+..+-+.+|+...-+.++.+.+. .+..|...
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v~~~~~~------------------~~~kp~~~ 146 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAIVDADEV------------------KEGKPHPE 146 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEeeehhhC------------------CCCCCChH
Confidence 367899999999999999999999987 6677888889986432233322211 12233221
Q ss_pred HHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCee
Q 003740 739 HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG 772 (799)
Q Consensus 739 ~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVG 772 (799)
-+-+.+++. | +.+.|+||..+|..+-+.|++-
T Consensus 147 -~~~~~~~~~-~~~~~~~v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 147 -TFLLAAELL-GVSPNECVVFEDALAGVQAARAAGMF 181 (185)
T ss_pred -HHHHHHHHc-CCCHHHeEEEeCcHhhHHHHHHCCCe
Confidence 122233322 3 5688999999999999999874
No 122
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=95.78 E-value=0.016 Score=62.49 Aligned_cols=108 Identities=14% Similarity=0.054 Sum_probs=73.7
Q ss_pred ccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCcc-CCceeecchhhhccCHHHHhhhcCCceEEEecCc
Q 003740 657 IKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILT-DNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 735 (799)
Q Consensus 657 ~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP 735 (799)
..+++.|++.++++.|++.|+++.++||....++..+.+.+|+.. .-.. +.|.+. ...+..... -.+-.|
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~-i~~~~~----~~~~~~~~~----~~kp~p 254 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDD-LIGRPP----DMHFQREQG----DKRPDD 254 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhh-hhCCcc----hhhhcccCC----CCCCcH
Confidence 678999999999999999999999999999999999999999863 1111 111110 000000000 013345
Q ss_pred ccHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeee
Q 003740 736 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 773 (799)
Q Consensus 736 ~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGi 773 (799)
.=+...++.+-...-..+.|+||..+|+.+-+.|++-.
T Consensus 255 ~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 255 VVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred HHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 55565655543210267999999999999999999864
No 123
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=95.77 E-value=0.018 Score=58.92 Aligned_cols=97 Identities=16% Similarity=0.219 Sum_probs=68.7
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.||+.++++.|++.|+++.++|+-+...+...-+.+|+...-+.++.+.+. .+.-|.. .
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~------------------~~~KP~~-~ 154 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITSEEE------------------GVEKPHP-K 154 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEEEeccC------------------CCCCCCH-H
Confidence 46899999999999999999999999988888888999986433333333221 1223322 2
Q ss_pred HHHHHHHHhCC---CEEEEEcCCc-cCHHhhhcCCe-eeecC
Q 003740 740 TLVKHLRTTLG---EVVAVTGDGT-NDAPALHEADI-GLAMG 776 (799)
Q Consensus 740 ~lV~~Lq~~~G---~vVa~~GDG~-NDapAL~~AdV-Giamg 776 (799)
-+...+++. | +.+.|+||.. +|..+-++|++ .|.+.
T Consensus 155 ~~~~~~~~~-~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 155 IFYAALKRL-GVKPEEAVMVGDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred HHHHHHHHc-CCChhhEEEECCChHHHHHHHHHCCCEEEEEC
Confidence 333444443 4 5689999998 99999999987 34333
No 124
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=95.64 E-value=0.075 Score=52.10 Aligned_cols=114 Identities=11% Similarity=0.069 Sum_probs=74.1
Q ss_pred ceeeeeecccCCCcccHHHHHHHHHhCCCEEEEEcCC-CHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCc
Q 003740 649 YTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGD-NINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKI 727 (799)
Q Consensus 649 ~~~lg~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD-~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 727 (799)
.......+-+-+++||+.+.++.|+++|+++.++|+- ....+..+-..+||..... . ..+...+..+
T Consensus 34 ~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~------~------~~~~~~Fd~i 101 (174)
T TIGR01685 34 SIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGK------T------VPMHSLFDDR 101 (174)
T ss_pred CeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCC------c------ccHHHhceee
Confidence 3455666667788999999999999999999999965 8999999999999851100 0 0000111111
Q ss_pred eEEEecCcccH--HHHHHHHHHhC-----CCEEEEEcCCccCHHhhhcCCeeeec
Q 003740 728 QVMARSSPMDK--HTLVKHLRTTL-----GEVVAVTGDGTNDAPALHEADIGLAM 775 (799)
Q Consensus 728 ~v~ar~sP~dK--~~lV~~Lq~~~-----G~vVa~~GDG~NDapAL~~AdVGiam 775 (799)
+.+.-.+..| ..+.+.+.+.+ -+.+.|+||...|+.|-++|.+-...
T Consensus 102 -v~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 102 -IEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred -eeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 2222211122 23344443321 25799999999999999999885544
No 125
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=95.37 E-value=0.059 Score=53.39 Aligned_cols=126 Identities=19% Similarity=0.253 Sum_probs=81.4
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCc---------------------------eeecchhh
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG---------------------------IAIEGPEF 712 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~---------------------------~~~~g~~~ 712 (799)
.+-||+.++.+.+++. ...+++|---.+-+.++|.-+|+...+- ..++|+++
T Consensus 83 ~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geel 161 (315)
T COG4030 83 KLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEEL 161 (315)
T ss_pred ccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHH
Confidence 3468999999999876 6777888888899999999999964321 11222221
Q ss_pred h--------ccCHHHHhhhcCCceEEEecCcccHHHHHHHHHHhC--CCEEEEEcCCccCHHhhhcCCe--eeecCCCCC
Q 003740 713 R--------EKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTL--GEVVAVTGDGTNDAPALHEADI--GLAMGIAGT 780 (799)
Q Consensus 713 ~--------~~~~~~~~~~~~~~~v~ar~sP~dK~~lV~~Lq~~~--G~vVa~~GDG~NDapAL~~AdV--Giamgi~gt 780 (799)
- .+.+.++.+++..+.+.+. ..|.++++.+-..- ....+++||.+.|..||+++.= |+|+.-+|-
T Consensus 162 fe~lDe~F~rLip~E~gki~~~vk~VGg---g~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGN 238 (315)
T COG4030 162 FEKLDELFSRLIPSEVGKIVESVKAVGG---GEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGN 238 (315)
T ss_pred HHHHHHHHhhcCHHHHHHHHHhhhhccC---cchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCC
Confidence 1 1112223333333333332 35555555554431 2346899999999999999852 366666898
Q ss_pred HHHHHhcCC
Q 003740 781 EVELECCCF 789 (799)
Q Consensus 781 evak~aaDi 789 (799)
+=|..-||+
T Consensus 239 eYal~eAdV 247 (315)
T COG4030 239 EYALKEADV 247 (315)
T ss_pred cccccccce
Confidence 888888887
No 126
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=95.36 E-value=0.057 Score=52.91 Aligned_cols=83 Identities=22% Similarity=0.289 Sum_probs=61.6
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCC-HHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDN-INTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~-~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK 738 (799)
.+-|++.++++.|++.|+++.++|+-+ ...+..+.+.+|+.. .+...-|.-
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~---------------------------~~~~~KP~p- 94 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPV---------------------------LPHAVKPPG- 94 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEE---------------------------EcCCCCCCh-
Confidence 567999999999999999999999988 677888888888742 111223322
Q ss_pred HHHHHHHHHhCC---CEEEEEcCCc-cCHHhhhcCCe
Q 003740 739 HTLVKHLRTTLG---EVVAVTGDGT-NDAPALHEADI 771 (799)
Q Consensus 739 ~~lV~~Lq~~~G---~vVa~~GDG~-NDapAL~~AdV 771 (799)
..+-..+++. | +.++|+||.. .|..+-+.|++
T Consensus 95 ~~~~~~l~~~-~~~~~~~l~IGDs~~~Di~aA~~aGi 130 (170)
T TIGR01668 95 CAFRRAHPEM-GLTSEQVAVVGDRLFTDVMGGNRNGS 130 (170)
T ss_pred HHHHHHHHHc-CCCHHHEEEECCcchHHHHHHHHcCC
Confidence 2233333333 4 5699999998 79999999987
No 127
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=95.29 E-value=0.072 Score=52.71 Aligned_cols=97 Identities=19% Similarity=0.092 Sum_probs=55.4
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCH---------------HHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhc
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNI---------------NTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLI 724 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~---------------~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~ 724 (799)
.+.||+.++++.|++.|+++.++|..+. .....+-+..|+.-. .++......
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~--~i~~~~~~~----------- 95 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLD--GIYYCPHHP----------- 95 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccc--eEEECCCCC-----------
Confidence 3579999999999999999999998763 111223344555211 111000000
Q ss_pred CCceEEEecCcccHHHHHHHHHHh--CCCEEEEEcCCccCHHhhhcCCee
Q 003740 725 PKIQVMARSSPMDKHTLVKHLRTT--LGEVVAVTGDGTNDAPALHEADIG 772 (799)
Q Consensus 725 ~~~~v~ar~sP~dK~~lV~~Lq~~--~G~vVa~~GDG~NDapAL~~AdVG 772 (799)
.. .....-| +..-+.+.+++. ..+.+.|+||..+|..+-+.|++.
T Consensus 96 ~~--~~~~~KP-~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~ 142 (181)
T PRK08942 96 ED--GCDCRKP-KPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVT 142 (181)
T ss_pred CC--CCcCCCC-CHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCe
Confidence 00 0011122 122333333332 036799999999999999999973
No 128
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=95.23 E-value=0.039 Score=56.35 Aligned_cols=116 Identities=13% Similarity=0.092 Sum_probs=74.1
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.||+.+.++.|++. +++.++|+-....+..+-++.|+...-+.++.+.+. ....|..
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~~~~~------------------~~~KP~~-- 155 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFDDIFVSEDA------------------GIQKPDK-- 155 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhcCEEEEcCcc------------------CCCCCCH--
Confidence 5689999999999999 999999999999999999999996533333322221 1112322
Q ss_pred HHHHHHHHhC----CCEEEEEcCCc-cCHHhhhcCCe---eeecCCCCCHHHHHhcCC---ChHhHHHh
Q 003740 740 TLVKHLRTTL----GEVVAVTGDGT-NDAPALHEADI---GLAMGIAGTEVELECCCF---NFSSRKTY 797 (799)
Q Consensus 740 ~lV~~Lq~~~----G~vVa~~GDG~-NDapAL~~AdV---Giamgi~gtevak~aaDi---nf~si~~~ 797 (799)
.+.+..-+++ -+.+.|+||.. +|..+-+.+++ ++.-| ..++.....+|. +++.+.+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~-~~~~~~~~~~~~~~~~~~el~~~ 223 (224)
T TIGR02254 156 EIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPD-MHPNPDDIIPTYEIRSLEELYEI 223 (224)
T ss_pred HHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCC-CCCCCCCCCCceEECCHHHHHhh
Confidence 2222222222 24689999998 89999999995 44333 222212223443 66666544
No 129
>PRK09449 dUMP phosphatase; Provisional
Probab=95.21 E-value=0.076 Score=54.39 Aligned_cols=118 Identities=17% Similarity=0.190 Sum_probs=74.5
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.||+.++++.|+ .|+++.++|+.....+...-+..|+...-+.++.+.+. ...-| +..
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~------------------~~~KP-~p~ 154 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYFDLLVISEQV------------------GVAKP-DVA 154 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHcCEEEEECcc------------------CCCCC-CHH
Confidence 36899999999999 68999999999988888888889986432222222221 01123 223
Q ss_pred HHHHHHHHhCC----CEEEEEcCCc-cCHHhhhcCCee-eecCCCCCH-HHHHhcCC---ChHhHHHhh
Q 003740 740 TLVKHLRTTLG----EVVAVTGDGT-NDAPALHEADIG-LAMGIAGTE-VELECCCF---NFSSRKTYI 798 (799)
Q Consensus 740 ~lV~~Lq~~~G----~vVa~~GDG~-NDapAL~~AdVG-iamgi~gte-vak~aaDi---nf~si~~~i 798 (799)
-+-..+++. | +.+.|+||.. +|..+-+.|++- +...-.+.+ .....+|. +|..+.+.+
T Consensus 155 ~~~~~~~~~-~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~~~~el~~~l 222 (224)
T PRK09449 155 IFDYALEQM-GNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVSSLSELEQLL 222 (224)
T ss_pred HHHHHHHHc-CCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEECCHHHHHHHH
Confidence 333444433 4 4699999998 799999999974 333211211 11123555 677666543
No 130
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=95.17 E-value=0.055 Score=51.57 Aligned_cols=96 Identities=26% Similarity=0.342 Sum_probs=60.7
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCH---------------HHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhc
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNI---------------NTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLI 724 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~---------------~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~ 724 (799)
++.||+.++++.|++.|+++.++|..+. .....+.+.+|+... ........-.
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-~~~~~~~~~~----------- 94 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVD-GVLFCPHHPA----------- 94 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCcee-EEEECCCCCC-----------
Confidence 4689999999999999999999998763 455667788888521 0000000000
Q ss_pred CCceEEEecCcccHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCee
Q 003740 725 PKIQVMARSSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG 772 (799)
Q Consensus 725 ~~~~v~ar~sP~dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVG 772 (799)
.......| |..+.+...+++| +.+.|+||...|..+-+.|++-
T Consensus 95 ---~~~~~~KP--~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~ 140 (147)
T TIGR01656 95 ---DNCSCRKP--KPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLA 140 (147)
T ss_pred ---CCCCCCCC--CHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCC
Confidence 00000123 3344444433335 5699999999999998888874
No 131
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=95.15 E-value=0.037 Score=60.94 Aligned_cols=94 Identities=18% Similarity=0.231 Sum_probs=69.0
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.||+.+.++.|++.|+++.++|+-+...+..+-+..||...-+.++.+++.. +.-|.. .
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~Iv~sddv~------------------~~KP~P-e 276 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVIVAAEDVY------------------RGKPDP-E 276 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEEEecCcCC------------------CCCCCH-H
Confidence 367999999999999999999999999999999999999975444444444321 122321 1
Q ss_pred HHHHHHHHh--CCCEEEEEcCCccCHHhhhcCCee
Q 003740 740 TLVKHLRTT--LGEVVAVTGDGTNDAPALHEADIG 772 (799)
Q Consensus 740 ~lV~~Lq~~--~G~vVa~~GDG~NDapAL~~AdVG 772 (799)
-+..++++. ....+.|+||..+|+.|-+.|++-
T Consensus 277 ifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~ 311 (381)
T PLN02575 277 MFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMK 311 (381)
T ss_pred HHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCE
Confidence 222233322 146799999999999999999984
No 132
>PLN02811 hydrolase
Probab=95.05 E-value=0.062 Score=55.03 Aligned_cols=96 Identities=18% Similarity=0.253 Sum_probs=58.2
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHH-HHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKA-IARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~a-iA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK 738 (799)
++.||+.+.++.|++.|+++.++||-....... ..+..|+......++.+.+.. + .+.-|. -
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~---------------~-~~~KP~-p 140 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPE---------------V-KQGKPA-P 140 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhh---------------c-cCCCCC-c
Confidence 468999999999999999999999987654432 222234432212222222000 0 011121 1
Q ss_pred HHHHHHHHHhCC------CEEEEEcCCccCHHhhhcCCeee
Q 003740 739 HTLVKHLRTTLG------EVVAVTGDGTNDAPALHEADIGL 773 (799)
Q Consensus 739 ~~lV~~Lq~~~G------~vVa~~GDG~NDapAL~~AdVGi 773 (799)
.-+...+++. | +-+.|+||...|+.|-+.|++-.
T Consensus 141 ~~~~~a~~~~-~~~~~~~~~~v~IgDs~~di~aA~~aG~~~ 180 (220)
T PLN02811 141 DIFLAAARRF-EDGPVDPGKVLVFEDAPSGVEAAKNAGMSV 180 (220)
T ss_pred HHHHHHHHHh-CCCCCCccceEEEeccHhhHHHHHHCCCeE
Confidence 2233333333 3 66999999999999999999843
No 133
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=95.03 E-value=0.038 Score=52.77 Aligned_cols=93 Identities=17% Similarity=-0.007 Sum_probs=66.8
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC-ceeecchhhhccCHHHHhhhcCCceEEEecCccc
Q 003740 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (799)
Q Consensus 659 D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~d 737 (799)
-++|||+.+.++.|+ .++++.++|.-+...+..+-+.+|+...- ..++.+++.. +.-|.
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f~~i~~~~d~~------------------~~KP~- 103 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYFGYRRLFRDECV------------------FVKGK- 103 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCEeeeEEECcccc------------------ccCCe-
Confidence 356999999999999 57999999999999999999999985321 2333333211 11232
Q ss_pred HHHHHHHHHHh--CCCEEEEEcCCccCHHhhhcCCeeee
Q 003740 738 KHTLVKHLRTT--LGEVVAVTGDGTNDAPALHEADIGLA 774 (799)
Q Consensus 738 K~~lV~~Lq~~--~G~vVa~~GDG~NDapAL~~AdVGia 774 (799)
+.+.+++. .-+.+.|+||..+|..|-++|.|-|.
T Consensus 104 ---~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 104 ---YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred ---EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEec
Confidence 55555544 13679999999999998888866553
No 134
>PLN02940 riboflavin kinase
Probab=94.93 E-value=0.036 Score=61.78 Aligned_cols=94 Identities=14% Similarity=0.182 Sum_probs=66.8
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHH-HcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAR-ECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~-~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK 738 (799)
++.||+.+.++.|++.|+++.++|+-....+...-+ ..|+...-+.++.+++. .+.-| +.
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v------------------~~~KP-~p 153 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEV------------------EKGKP-SP 153 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhc------------------CCCCC-CH
Confidence 357999999999999999999999999888877665 67886543444444431 12233 22
Q ss_pred HHHHHHHHHh--CCCEEEEEcCCccCHHhhhcCCee
Q 003740 739 HTLVKHLRTT--LGEVVAVTGDGTNDAPALHEADIG 772 (799)
Q Consensus 739 ~~lV~~Lq~~--~G~vVa~~GDG~NDapAL~~AdVG 772 (799)
.-+.+.+++. ..+.+.|+||..+|..|-+.|++-
T Consensus 154 ~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~ 189 (382)
T PLN02940 154 DIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGME 189 (382)
T ss_pred HHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCE
Confidence 3334444433 136689999999999999999975
No 135
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=94.62 E-value=0.061 Score=51.46 Aligned_cols=88 Identities=18% Similarity=0.275 Sum_probs=58.0
Q ss_pred CcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHHH
Q 003740 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHT 740 (799)
Q Consensus 661 ~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~ 740 (799)
..||+.+.++.|++.|+++.++|+-....+....+.. +......++...+ + . ..| +..
T Consensus 65 ~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~~i~~~~~-----------------~-~-~Kp--~~~ 122 (154)
T TIGR01549 65 YIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFDLILGSDE-----------------F-G-AKP--EPE 122 (154)
T ss_pred eccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCcEEEecCC-----------------C-C-CCc--CHH
Confidence 3479999999999999999999999999988887775 4322111111111 1 1 122 223
Q ss_pred HHHHHHHhCCC--EEEEEcCCccCHHhhhcCC
Q 003740 741 LVKHLRTTLGE--VVAVTGDGTNDAPALHEAD 770 (799)
Q Consensus 741 lV~~Lq~~~G~--vVa~~GDG~NDapAL~~Ad 770 (799)
....+.+++|- .++|+||..+|..|-++|+
T Consensus 123 ~~~~~~~~~~~~~~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 123 IFLAALESLGLPPEVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHHHHcCCCCCEEEEeCCHHHHHHHHHcc
Confidence 33333333242 6899999999998877763
No 136
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=94.43 E-value=0.19 Score=52.74 Aligned_cols=86 Identities=13% Similarity=0.183 Sum_probs=61.1
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEEcCCCHH---HHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecC
Q 003740 658 KDPMRPGVKESVAICRSAGITVRMVTGDNIN---TAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSS 734 (799)
Q Consensus 658 ~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~---tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~s 734 (799)
..++-||+.+.++.+++.|+++.++|+-... .+...-+..|+..... -.++.|-.
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~----------------------d~lllr~~ 173 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADE----------------------EHLLLKKD 173 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCc----------------------ceEEeCCC
Confidence 4456899999999999999999999997643 3445567788853110 01444433
Q ss_pred cccHHHHHHHHHHhCCCEEEEEcCCccCHHhh
Q 003740 735 PMDKHTLVKHLRTTLGEVVAVTGDGTNDAPAL 766 (799)
Q Consensus 735 P~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL 766 (799)
...|..-.+.+.+. -.+|+++||-.+|....
T Consensus 174 ~~~K~~rr~~I~~~-y~Ivl~vGD~~~Df~~~ 204 (266)
T TIGR01533 174 KSSKESRRQKVQKD-YEIVLLFGDNLLDFDDF 204 (266)
T ss_pred CCCcHHHHHHHHhc-CCEEEEECCCHHHhhhh
Confidence 34576666777655 56899999999998654
No 137
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=94.22 E-value=0.14 Score=55.96 Aligned_cols=98 Identities=22% Similarity=0.213 Sum_probs=61.5
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEEcCC---------------CHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhh
Q 003740 659 DPMRPGVKESVAICRSAGITVRMVTGD---------------NINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKL 723 (799)
Q Consensus 659 D~~R~~v~~aI~~l~~aGI~v~mlTGD---------------~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~ 723 (799)
-++.|++.++++.|+++|+++.++|+= ....+..+.+..||.- ....+.. ... .+
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~f-d~i~i~~-~~~---sd----- 98 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKF-DEVLICP-HFP---ED----- 98 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCce-eeEEEeC-CcC---cc-----
Confidence 467899999999999999999999982 2334666777777741 1111110 000 00
Q ss_pred cCCceEEEecCcccHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeee
Q 003740 724 IPKIQVMARSSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGL 773 (799)
Q Consensus 724 ~~~~~v~ar~sP~dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGi 773 (799)
. ..+ ..-|-.++..+.++++ ..+.|+||+.+|..+-+.|++-.
T Consensus 99 --~--~~~---rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~ 144 (354)
T PRK05446 99 --N--CSC---RKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKG 144 (354)
T ss_pred --c--CCC---CCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeE
Confidence 0 001 1223344544444422 67999999999999999998864
No 138
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=94.21 E-value=0.12 Score=55.38 Aligned_cols=97 Identities=20% Similarity=0.194 Sum_probs=62.9
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC-C-ceeecchhhhccCHHHHhhhcCCceEEEecCccc
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD-N-GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~-~-~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~d 737 (799)
++.||+.+.++.|++.|+++.++|+-+......+-+..++... . -.++.+.+. ...-|.-
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~------------------~~~KP~p 205 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDDV------------------PKKKPDP 205 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEecccc------------------CCCCCCH
Confidence 5789999999999999999999999988888777665532211 0 011122210 1112211
Q ss_pred HHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeecC
Q 003740 738 KHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMG 776 (799)
Q Consensus 738 K~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiamg 776 (799)
.-+.+.+++. | ..+.|+||+.+|..|-++|++....-
T Consensus 206 -~~~~~a~~~~-~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v 245 (286)
T PLN02779 206 -DIYNLAAETL-GVDPSRCVVVEDSVIGLQAAKAAGMRCIVT 245 (286)
T ss_pred -HHHHHHHHHh-CcChHHEEEEeCCHHhHHHHHHcCCEEEEE
Confidence 1223333333 4 56899999999999999999765443
No 139
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=94.18 E-value=0.11 Score=46.07 Aligned_cols=49 Identities=22% Similarity=0.339 Sum_probs=37.3
Q ss_pred eeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHH---HHcCCcc
Q 003740 653 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIA---RECGILT 701 (799)
Q Consensus 653 g~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA---~~~GI~~ 701 (799)
|++...+.+=||+.++|+.|+++|++++++|.....+...++ +.+||..
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~ 58 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPV 58 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT-
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCC
Confidence 566677888999999999999999999999999866654444 6678764
No 140
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=94.03 E-value=0.099 Score=52.63 Aligned_cols=91 Identities=16% Similarity=0.236 Sum_probs=60.3
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++-||+.++++.|++.|+++.++|+-... ...+.+.+|+...-+.++...+. ...-|. ..
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd~i~~s~~~------------------~~~KP~-~~ 164 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFDFVVTSYEV------------------GAEKPD-PK 164 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcceEEeeccc------------------CCCCCC-HH
Confidence 56799999999999999999999976554 46777888885432222222211 011222 22
Q ss_pred HHHHHHHHhCC---CEEEEEcCCc-cCHHhhhcCCe
Q 003740 740 TLVKHLRTTLG---EVVAVTGDGT-NDAPALHEADI 771 (799)
Q Consensus 740 ~lV~~Lq~~~G---~vVa~~GDG~-NDapAL~~AdV 771 (799)
-+-+.+++. | ..+.|+||.. +|..+-++|++
T Consensus 165 ~~~~~~~~~-~~~~~~~~~IgD~~~~Di~~A~~aG~ 199 (203)
T TIGR02252 165 IFQEALERA-GISPEEALHIGDSLRNDYQGARAAGW 199 (203)
T ss_pred HHHHHHHHc-CCChhHEEEECCCchHHHHHHHHcCC
Confidence 333344433 4 5799999997 89988888765
No 141
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=93.89 E-value=0.21 Score=50.97 Aligned_cols=88 Identities=17% Similarity=0.138 Sum_probs=58.2
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEEcCCCHHH---HHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecC
Q 003740 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINT---AKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSS 734 (799)
Q Consensus 658 ~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~t---A~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~s 734 (799)
+-|.-|++.++++.+++.|++|+++||..... ...--++.|+..-..+++.+.+-. ....
T Consensus 118 ~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~~~LiLR~~~d~-----------------~~~~ 180 (229)
T TIGR01675 118 AAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGWKHLILRGLEDS-----------------NKTV 180 (229)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCcCeeeecCCCCC-----------------CchH
Confidence 45778999999999999999999999999765 223335578753222333221100 0000
Q ss_pred cccHHHHHHHHHHhCC-CEEEEEcCCccCH
Q 003740 735 PMDKHTLVKHLRTTLG-EVVAVTGDGTNDA 763 (799)
Q Consensus 735 P~dK~~lV~~Lq~~~G-~vVa~~GDG~NDa 763 (799)
-.-|...=+.+.+. | .+|+++||-.+|.
T Consensus 181 ~~yKs~~R~~l~~~-GYrIv~~iGDq~sDl 209 (229)
T TIGR01675 181 VTYKSEVRKSLMEE-GYRIWGNIGDQWSDL 209 (229)
T ss_pred hHHHHHHHHHHHhC-CceEEEEECCChHHh
Confidence 11166666677766 6 5889999999986
No 142
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=93.63 E-value=0.43 Score=58.49 Aligned_cols=77 Identities=14% Similarity=0.163 Sum_probs=51.6
Q ss_pred HHHHHHHHHHhccceeeEEEEEcCCCCCCCCCCCCCcceeeeeecccCCCcccHHHHHHHH-HhCCCEEEEEcCCCHHHH
Q 003740 612 LNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAIC-RSAGITVRMVTGDNINTA 690 (799)
Q Consensus 612 ~~~~~~~~a~~g~r~l~~a~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~~R~~v~~aI~~l-~~aGI~v~mlTGD~~~tA 690 (799)
++.....|.....|.+++- -|.|++-.....-.+-|+..++++.| ++.|+.|.++||....+.
T Consensus 584 ~~~i~~~y~~~~~rlI~LD----------------yDGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L 647 (854)
T PLN02205 584 MEHIVSAYKRTTTRAILLD----------------YDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTL 647 (854)
T ss_pred HHHHHHHHHhhcCeEEEEe----------------cCCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHH
Confidence 3455666666666766653 23444422222335567999999996 778999999999999998
Q ss_pred HHHHHH---cCCccCCc
Q 003740 691 KAIARE---CGILTDNG 704 (799)
Q Consensus 691 ~aiA~~---~GI~~~~~ 704 (799)
...-.. +++..+++
T Consensus 648 ~~~f~~~~~l~laaEHG 664 (854)
T PLN02205 648 ADWFSPCEKLGIAAEHG 664 (854)
T ss_pred HHHhCCCCCeEEEEeCC
Confidence 887754 44554444
No 143
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=93.38 E-value=0.23 Score=48.17 Aligned_cols=92 Identities=22% Similarity=0.153 Sum_probs=60.7
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCC---------------CHHHHHHHHHHcCCccCCceeecc-----hhhhccCHHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGD---------------NINTAKAIARECGILTDNGIAIEG-----PEFREKSDEE 719 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD---------------~~~tA~aiA~~~GI~~~~~~~~~g-----~~~~~~~~~~ 719 (799)
++-||+.++++.|++.|+++.++|.- ....+..+-+..|+.- ..++-+ .+
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~f--d~ii~~~~~~~~~-------- 98 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIF--DDVLICPHFPDDN-------- 98 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCce--eEEEECCCCCCCC--------
Confidence 45689999999999999999999984 2445667778888741 111111 11
Q ss_pred HhhhcCCceEEEecCcccHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeee
Q 003740 720 LSKLIPKIQVMARSSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGL 773 (799)
Q Consensus 720 ~~~~~~~~~v~ar~sP~dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGi 773 (799)
+. ..-| |..+++.+.+++| +.+.|+||+.+|..+-+.|++-.
T Consensus 99 ---------~~-~~KP--~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~ 143 (161)
T TIGR01261 99 ---------CD-CRKP--KIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRG 143 (161)
T ss_pred ---------CC-CCCC--CHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeE
Confidence 00 0122 2344444433334 45899999999999999998854
No 144
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=93.30 E-value=0.31 Score=50.70 Aligned_cols=94 Identities=16% Similarity=0.179 Sum_probs=60.6
Q ss_pred eeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHH--HHHHHcCCcc-CCceeecchhhhccCHHHHhhhcCCceE
Q 003740 653 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAK--AIARECGILT-DNGIAIEGPEFREKSDEELSKLIPKIQV 729 (799)
Q Consensus 653 g~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~--aiA~~~GI~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~v 729 (799)
|.+.-...+-|++.++++.|+++|+++.++|.-....+. ...+++|+.. ..+.+++..+..
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s~~~~---------------- 80 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISSGEIA---------------- 80 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEccHHHH----------------
Confidence 445556778999999999999999999999996554444 5668899864 222222222110
Q ss_pred EEecCcccHHHHHHHHHHh--CCCEEEEEcCCccCHHhhhcCC
Q 003740 730 MARSSPMDKHTLVKHLRTT--LGEVVAVTGDGTNDAPALHEAD 770 (799)
Q Consensus 730 ~ar~sP~dK~~lV~~Lq~~--~G~vVa~~GDG~NDapAL~~Ad 770 (799)
..-+.+.+++. .+..+.|+||+.+|...+..++
T Consensus 81 --------~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~ 115 (242)
T TIGR01459 81 --------VQMILESKKRFDIRNGIIYLLGHLENDIINLMQCY 115 (242)
T ss_pred --------HHHHHhhhhhccCCCceEEEeCCcccchhhhcCCC
Confidence 11222222221 1456899999988888875443
No 145
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=92.93 E-value=0.35 Score=52.65 Aligned_cols=91 Identities=10% Similarity=0.116 Sum_probs=72.0
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHH----cCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCc
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARE----CGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 735 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~----~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP 735 (799)
++.+++.++++.|++.|+.+.++|.-+...|..+-+. +|+...- ......+
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f-------------------------~~~~~~~ 85 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDF-------------------------DARSINW 85 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHe-------------------------eEEEEec
Confidence 4579999999999999999999999999999999988 8875310 1112335
Q ss_pred ccHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeeec
Q 003740 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAM 775 (799)
Q Consensus 736 ~dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGiam 775 (799)
..|-..++.+.+++| .-++|+||...|..+.+++...+.+
T Consensus 86 ~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~ 128 (320)
T TIGR01686 86 GPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTL 128 (320)
T ss_pred CchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCcc
Confidence 567777776655534 6899999999999999998887644
No 146
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=92.90 E-value=0.42 Score=46.61 Aligned_cols=91 Identities=13% Similarity=0.187 Sum_probs=57.6
Q ss_pred CcccHHHHHHHHHhCCCEEEEEcCCCH------------HHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCce
Q 003740 661 MRPGVKESVAICRSAGITVRMVTGDNI------------NTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQ 728 (799)
Q Consensus 661 ~R~~v~~aI~~l~~aGI~v~mlTGD~~------------~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 728 (799)
+-||+.++++.|+++|+++.++|.-.. ..+..+-+.+|+.. ..++.+..
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~--~~ii~~~~----------------- 103 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI--QVLAATHA----------------- 103 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE--EEEEecCC-----------------
Confidence 349999999999999999999997544 24566778888842 11111111
Q ss_pred EEEecCcccHHHHHHHHHHhCC-----CEEEEEcCCc--------cCHHhhhcCCeee
Q 003740 729 VMARSSPMDKHTLVKHLRTTLG-----EVVAVTGDGT--------NDAPALHEADIGL 773 (799)
Q Consensus 729 v~ar~sP~dK~~lV~~Lq~~~G-----~vVa~~GDG~--------NDapAL~~AdVGi 773 (799)
...+ .|. -.+++.+.+++| +-+.||||.. +|..|-++|++-.
T Consensus 104 ~~~~-KP~--p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~ 158 (166)
T TIGR01664 104 GLYR-KPM--TGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEF 158 (166)
T ss_pred CCCC-CCc--cHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCc
Confidence 0001 222 223333333324 5699999986 6998888887643
No 147
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=92.67 E-value=0.31 Score=45.28 Aligned_cols=39 Identities=5% Similarity=0.135 Sum_probs=35.0
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCC-CHHHHHHHHHHcC
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGD-NINTAKAIARECG 698 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD-~~~tA~aiA~~~G 698 (799)
++.||+.+.++.|++.|+++.++|+- ....+..+-+..|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 78999999999999999999999999 7777777777777
No 148
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=92.65 E-value=0.79 Score=45.62 Aligned_cols=37 Identities=11% Similarity=0.177 Sum_probs=33.6
Q ss_pred cHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCc
Q 003740 664 GVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL 700 (799)
Q Consensus 664 ~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~ 700 (799)
.+...+.+|+++|++|+.+|.-....-...=+.+|..
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 3678999999999999999999999888999999986
No 149
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=92.48 E-value=0.31 Score=49.81 Aligned_cols=95 Identities=13% Similarity=0.192 Sum_probs=63.9
Q ss_pred ccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcC---CccCCceeecchhhhccCHHHHhhhcCCceEEEec
Q 003740 657 IKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECG---ILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARS 733 (799)
Q Consensus 657 ~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~G---I~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~ 733 (799)
++-++.||+.++++.|+++|+++.++|..+....+.+-+..+ +... +...+.. +.+ .
T Consensus 92 ~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~-----------------f~~~fd~--~~g-~ 151 (220)
T TIGR01691 92 LTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPY-----------------FSGYFDT--TVG-L 151 (220)
T ss_pred cccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhh-----------------cceEEEe--Ccc-c
Confidence 445789999999999999999999999998887777766552 2210 0000110 111 1
Q ss_pred CcccHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeee
Q 003740 734 SPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGL 773 (799)
Q Consensus 734 sP~dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGi 773 (799)
-| +..-+.+.+++. | +.++|+||...|+.|-++|++-.
T Consensus 152 KP-~p~~y~~i~~~l-gv~p~e~lfVgDs~~Di~AA~~AG~~t 192 (220)
T TIGR01691 152 KT-EAQSYVKIAGQL-GSPPREILFLSDIINELDAARKAGLHT 192 (220)
T ss_pred CC-CHHHHHHHHHHh-CcChhHEEEEeCCHHHHHHHHHcCCEE
Confidence 22 223344444443 4 56899999999999999999854
No 150
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=92.44 E-value=0.57 Score=45.48 Aligned_cols=75 Identities=21% Similarity=0.243 Sum_probs=59.8
Q ss_pred ccCCCcccHHHHHHHHHhCCC--EEEEEcCC-------CHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCc
Q 003740 657 IKDPMRPGVKESVAICRSAGI--TVRMVTGD-------NINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKI 727 (799)
Q Consensus 657 ~~D~~R~~v~~aI~~l~~aGI--~v~mlTGD-------~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 727 (799)
=++.+-|+..+.+++|++.+. +|.++|-- +...|.++++.+||.
T Consensus 56 ~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp--------------------------- 108 (168)
T PF09419_consen 56 YEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIP--------------------------- 108 (168)
T ss_pred CcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCc---------------------------
Confidence 467788999999999999987 59999986 589999999999986
Q ss_pred eEE--EecCcccHHHHHHHHHHh----CCCEEEEEcCC
Q 003740 728 QVM--ARSSPMDKHTLVKHLRTT----LGEVVAVTGDG 759 (799)
Q Consensus 728 ~v~--ar~sP~dK~~lV~~Lq~~----~G~vVa~~GDG 759 (799)
|+ ...-|.-..++.+.++.+ .-+-++|+||-
T Consensus 109 -vl~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDr 145 (168)
T PF09419_consen 109 -VLRHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDR 145 (168)
T ss_pred -EEEeCCCCCccHHHHHHHHhhccCCCCchhEEEEcch
Confidence 43 335786667788887643 13569999995
No 151
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=91.68 E-value=0.15 Score=51.58 Aligned_cols=94 Identities=15% Similarity=0.135 Sum_probs=56.5
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEEcCCCHHH--HHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcc
Q 003740 659 DPMRPGVKESVAICRSAGITVRMVTGDNINT--AKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM 736 (799)
Q Consensus 659 D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~t--A~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~ 736 (799)
-++.|++.+.++.|++.|+++.++|...... ........|+...-+.++...+ + ...-|.
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s~~-----------------~-~~~KP~ 154 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDAVVESCL-----------------E-GLRKPD 154 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEeee-----------------c-CCCCCC
Confidence 3578999999999999999999999876433 2222333444321111111111 0 011232
Q ss_pred cHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCee
Q 003740 737 DKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG 772 (799)
Q Consensus 737 dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVG 772 (799)
-. -+-..+++. | +.++|+||...|..+-++|++-
T Consensus 155 p~-~~~~~~~~~-g~~~~~~l~i~D~~~di~aA~~aG~~ 191 (211)
T TIGR02247 155 PR-IYQLMLERL-GVAPEECVFLDDLGSNLKPAAALGIT 191 (211)
T ss_pred HH-HHHHHHHHc-CCCHHHeEEEcCCHHHHHHHHHcCCE
Confidence 21 222333333 4 5688889999999999999884
No 152
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=91.48 E-value=0.32 Score=50.66 Aligned_cols=65 Identities=18% Similarity=0.158 Sum_probs=47.8
Q ss_pred EEEecCcccHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcC--------CeeeecCCCCCHHHHHhcCC---ChHhH
Q 003740 729 VMARSSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEA--------DIGLAMGIAGTEVELECCCF---NFSSR 794 (799)
Q Consensus 729 v~ar~sP~dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~A--------dVGiamgi~gtevak~aaDi---nf~si 794 (799)
+-.+..+.+|...++.+.+.++ ..++|+||+.||.+|++.+ ..|++|+ .|. .+..|+. +...+
T Consensus 159 ~e~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~-~g~--~~~~A~~~~~~~~~v 235 (244)
T TIGR00685 159 VELKPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG-SGS--KKTVAKFHLTGPQQV 235 (244)
T ss_pred EEEeeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe-cCC--cCCCceEeCCCHHHH
Confidence 4455667899999999877745 4689999999999999999 5889895 342 2445565 55554
Q ss_pred HH
Q 003740 795 KT 796 (799)
Q Consensus 795 ~~ 796 (799)
..
T Consensus 236 ~~ 237 (244)
T TIGR00685 236 LE 237 (244)
T ss_pred HH
Confidence 43
No 153
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=91.26 E-value=0.62 Score=45.82 Aligned_cols=27 Identities=19% Similarity=0.273 Sum_probs=24.4
Q ss_pred CcccHHHHHHHHHhCCCEEEEEcCCCH
Q 003740 661 MRPGVKESVAICRSAGITVRMVTGDNI 687 (799)
Q Consensus 661 ~R~~v~~aI~~l~~aGI~v~mlTGD~~ 687 (799)
+.||+.++++.|+++|+++.++|.-+.
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~ 53 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSG 53 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 468999999999999999999998763
No 154
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=90.04 E-value=0.7 Score=58.34 Aligned_cols=92 Identities=15% Similarity=0.220 Sum_probs=65.4
Q ss_pred CcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCc-cCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL-TDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 661 ~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
+-||+.+.++.|+++|+++.++|+-....+..+-+..||. ..-+.++.+++. .+.-|...
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~------------------~~~KP~Pe- 222 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAF------------------ENLKPAPD- 222 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECccc------------------ccCCCCHH-
Confidence 5699999999999999999999999999999998999985 222333333321 12233221
Q ss_pred HHHHHHHHh--CCCEEEEEcCCccCHHhhhcCCe
Q 003740 740 TLVKHLRTT--LGEVVAVTGDGTNDAPALHEADI 771 (799)
Q Consensus 740 ~lV~~Lq~~--~G~vVa~~GDG~NDapAL~~AdV 771 (799)
-+.+.+++. ..+.+.|+||..+|+.|-++|++
T Consensus 223 ~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm 256 (1057)
T PLN02919 223 IFLAAAKILGVPTSECVVIEDALAGVQAARAAGM 256 (1057)
T ss_pred HHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCC
Confidence 112233322 03568999999999999999987
No 155
>PHA02597 30.2 hypothetical protein; Provisional
Probab=89.29 E-value=1 Score=44.98 Aligned_cols=93 Identities=15% Similarity=0.111 Sum_probs=57.3
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.||+.++++.|++.+ +..++|.-+..+....-+.+|+..-. ...+ ...+.++.... |-
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f-----------------~~~f-~~i~~~~~~~~-kp 133 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALF-----------------PGAF-SEVLMCGHDES-KE 133 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhC-----------------CCcc-cEEEEeccCcc-cH
Confidence 36899999999999975 56666765555444455666664210 0000 01122333332 44
Q ss_pred HHHHHHHHhCC-CEEEEEcCCccCHHhhhcC--Cee
Q 003740 740 TLVKHLRTTLG-EVVAVTGDGTNDAPALHEA--DIG 772 (799)
Q Consensus 740 ~lV~~Lq~~~G-~vVa~~GDG~NDapAL~~A--dVG 772 (799)
.+++...+++| +.++|+||..+|..|-++| ++-
T Consensus 134 ~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~ 169 (197)
T PHA02597 134 KLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLP 169 (197)
T ss_pred HHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCc
Confidence 55554444436 3578999999999999999 883
No 156
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=88.53 E-value=0.57 Score=47.03 Aligned_cols=94 Identities=15% Similarity=0.148 Sum_probs=57.5
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHH-cCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARE-CGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~-~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK 738 (799)
++.||+.++++.|++.|+++.++|.-+.......-.. .|+...-+.++...+. ...-|. -
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~------------------~~~KP~-p 144 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDL------------------GMRKPE-A 144 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEeccc------------------CCCCCC-H
Confidence 4689999999999999999999999876654433222 2442211112211111 111231 2
Q ss_pred HHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeee
Q 003740 739 HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGL 773 (799)
Q Consensus 739 ~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGi 773 (799)
.-+-..+++. | +-+.|+||...|..+-++|++-.
T Consensus 145 ~~~~~~~~~~-~~~p~~~l~vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 145 RIYQHVLQAE-GFSAADAVFFDDNADNIEAANALGITS 181 (199)
T ss_pred HHHHHHHHHc-CCChhHeEEeCCCHHHHHHHHHcCCEE
Confidence 2222333333 4 56889999999999999998853
No 157
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=87.98 E-value=0.73 Score=47.43 Aligned_cols=90 Identities=21% Similarity=0.280 Sum_probs=58.4
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEEcCCCHH---HHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCc
Q 003740 659 DPMRPGVKESVAICRSAGITVRMVTGDNIN---TAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 735 (799)
Q Consensus 659 D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~---tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP 735 (799)
+|.=|++.+.++.+++.|++|..+||.+.. ....=-++.|+...+.+++.+..-.. .....
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~~~l~lr~~~~~~----------------~~~~~ 177 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGWDHLILRPDKDPS----------------KKSAV 177 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTBSCGEEEEESSTS----------------S----
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCccchhccccccccc----------------ccccc
Confidence 355688999999999999999999998654 22333456676532223222221000 00012
Q ss_pred ccHHHHHHHHHHhCC-CEEEEEcCCccCHHh
Q 003740 736 MDKHTLVKHLRTTLG-EVVAVTGDGTNDAPA 765 (799)
Q Consensus 736 ~dK~~lV~~Lq~~~G-~vVa~~GDG~NDapA 765 (799)
.-|...-+.+++. | ++++++||-.+|...
T Consensus 178 ~yK~~~r~~i~~~-Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 178 EYKSERRKEIEKK-GYRIIANIGDQLSDFSG 207 (229)
T ss_dssp --SHHHHHHHHHT-TEEEEEEEESSGGGCHC
T ss_pred ccchHHHHHHHHc-CCcEEEEeCCCHHHhhc
Confidence 3488888888877 7 689999999999765
No 158
>PLN02645 phosphoglycolate phosphatase
Probab=87.91 E-value=1.2 Score=48.28 Aligned_cols=49 Identities=22% Similarity=0.369 Sum_probs=39.3
Q ss_pred eeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHH---HHcCCcc
Q 003740 653 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIA---RECGILT 701 (799)
Q Consensus 653 g~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA---~~~GI~~ 701 (799)
|.+.-.+.+=|++.++|+.|++.|++++++|+....+...++ +++|+..
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~ 88 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNV 88 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCC
Confidence 444444566699999999999999999999999977777776 5688753
No 159
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=87.74 E-value=0.69 Score=46.11 Aligned_cols=120 Identities=21% Similarity=0.240 Sum_probs=73.2
Q ss_pred CCcccHHHHHHHHHhCCC-EEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCce--EEEecCc-
Q 003740 660 PMRPGVKESVAICRSAGI-TVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQ--VMARSSP- 735 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI-~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--v~ar~sP- 735 (799)
|+-|++.++|+.+++.|- .++++|--|..-...+-+..||..--..+.+-+.. .+......+.|... =+.+|-|
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~--~da~G~L~v~pyH~~hsC~~CPsN 161 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPAC--VDASGRLLVRPYHTQHSCNLCPSN 161 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcc--cCCCCcEEeecCCCCCccCcCchh
Confidence 678999999999999996 99999999998888888888885310000000000 00000000011110 1222222
Q ss_pred ccHHHHHHHHHHhCC-------CEEEEEcCCccC-HHhhhcCCeeeecCCCCCHH
Q 003740 736 MDKHTLVKHLRTTLG-------EVVAVTGDGTND-APALHEADIGLAMGIAGTEV 782 (799)
Q Consensus 736 ~dK~~lV~~Lq~~~G-------~vVa~~GDG~ND-apAL~~AdVGiamgi~gtev 782 (799)
.=|..++..++.. + +.+-.+|||.|| +|.++...--+||--.|-++
T Consensus 162 mCKg~Vl~~~~~s-~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkgfpl 215 (256)
T KOG3120|consen 162 MCKGLVLDELVAS-QLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKGFPL 215 (256)
T ss_pred hhhhHHHHHHHHH-HhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCCCch
Confidence 3477777777655 2 378999999999 67776666666666556554
No 160
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=87.59 E-value=0.89 Score=44.87 Aligned_cols=91 Identities=14% Similarity=0.065 Sum_probs=61.2
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEe---cCcc
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMAR---SSPM 736 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar---~sP~ 736 (799)
++.|++.++++.|+ .++.++|+-+...+..+.+..|+...-+.++.+.+. -.+ .-|.
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~~~~~-----------------~~~~~~~KP~ 143 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCFDGIFCFDTA-----------------NPDYLLPKPS 143 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEEeecc-----------------cCccCCCCCC
Confidence 36789999999998 478999999999999999999986432233322221 111 2342
Q ss_pred cHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCee
Q 003740 737 DKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG 772 (799)
Q Consensus 737 dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVG 772 (799)
..-+-..+++. | +.++|+||...|..+=++|++-
T Consensus 144 -p~~~~~~~~~~-~~~~~~~l~vgD~~~di~aA~~~G~~ 180 (184)
T TIGR01993 144 -PQAYEKALREA-GVDPERAIFFDDSARNIAAAKALGMK 180 (184)
T ss_pred -HHHHHHHHHHh-CCCccceEEEeCCHHHHHHHHHcCCE
Confidence 22222333332 4 5688999999999988888764
No 161
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=86.88 E-value=0.91 Score=46.25 Aligned_cols=92 Identities=12% Similarity=0.134 Sum_probs=61.6
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCC-ceeecchhhhccCHHHHhhhcCCceEEEecCcccH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK 738 (799)
++.||+.+.++.| ++++.++|+.....+...=+..|+...- ..++.+.+.. +.-|. -
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F~~~v~~~~~~~------------------~~KP~-p 145 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFPDKLFSGYDIQ------------------RWKPD-P 145 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhCcceEeeHHhcC------------------CCCCC-h
Confidence 4468999999988 4999999999988888888888886432 1233332211 11221 1
Q ss_pred HHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCeeee
Q 003740 739 HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLA 774 (799)
Q Consensus 739 ~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVGia 774 (799)
.-+...+++. | +.++|+||..+|..+=++|++...
T Consensus 146 ~~~~~a~~~~-~~~p~~~l~igDs~~di~aA~~aG~~~i 183 (221)
T PRK10563 146 ALMFHAAEAM-NVNVENCILVDDSSAGAQSGIAAGMEVF 183 (221)
T ss_pred HHHHHHHHHc-CCCHHHeEEEeCcHhhHHHHHHCCCEEE
Confidence 2222333333 4 568999999999999999997664
No 162
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=85.60 E-value=1.3 Score=43.64 Aligned_cols=89 Identities=16% Similarity=0.145 Sum_probs=60.1
Q ss_pred cccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHHHH
Q 003740 662 RPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTL 741 (799)
Q Consensus 662 R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~l 741 (799)
-|+ .+.++.|++. ++..++||.....+..+-+..|+...-+.++..++.. +.-|. -.+
T Consensus 90 ~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~fd~i~~~~~~~------------------~~KP~--p~~ 147 (188)
T PRK10725 90 LPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADDVQ------------------HHKPA--PDT 147 (188)
T ss_pred ccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHceEEEehhhcc------------------CCCCC--hHH
Confidence 354 5889999865 8999999999999999999999965333444333311 11222 222
Q ss_pred HHHHHHhCC---CEEEEEcCCccCHHhhhcCCee
Q 003740 742 VKHLRTTLG---EVVAVTGDGTNDAPALHEADIG 772 (799)
Q Consensus 742 V~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVG 772 (799)
.+...+++| ..+.|+||..+|+.+-++|++-
T Consensus 148 ~~~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~ 181 (188)
T PRK10725 148 FLRCAQLMGVQPTQCVVFEDADFGIQAARAAGMD 181 (188)
T ss_pred HHHHHHHcCCCHHHeEEEeccHhhHHHHHHCCCE
Confidence 222222224 4578999999999999999874
No 163
>PLN02580 trehalose-phosphatase
Probab=85.34 E-value=0.97 Score=49.92 Aligned_cols=45 Identities=22% Similarity=0.352 Sum_probs=37.3
Q ss_pred ccHHHHHHHHHHhCC-----C-EEEEEcCCccCHHhhhc-----CCeeeecCCCCCH
Q 003740 736 MDKHTLVKHLRTTLG-----E-VVAVTGDGTNDAPALHE-----ADIGLAMGIAGTE 781 (799)
Q Consensus 736 ~dK~~lV~~Lq~~~G-----~-vVa~~GDG~NDapAL~~-----AdVGiamgi~gte 781 (799)
-+|..-|+.|.+.+| . .+.++||+.||-.|++. +++||+|| +|.+
T Consensus 300 ~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vg-n~~~ 355 (384)
T PLN02580 300 WNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVS-SVPK 355 (384)
T ss_pred CCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEe-cCCC
Confidence 499999999987755 2 25899999999999996 69999999 6654
No 164
>PLN02423 phosphomannomutase
Probab=84.93 E-value=5.3 Score=41.56 Aligned_cols=39 Identities=26% Similarity=0.357 Sum_probs=32.7
Q ss_pred ccHHHHHHHHHHhCCCEEEEEcC----CccCHHhhhc-CCeeeecC
Q 003740 736 MDKHTLVKHLRTTLGEVVAVTGD----GTNDAPALHE-ADIGLAMG 776 (799)
Q Consensus 736 ~dK~~lV~~Lq~~~G~vVa~~GD----G~NDapAL~~-AdVGiamg 776 (799)
-+|..-++.|+ . .+-|++.|| |-||.+||+. -=.|+++-
T Consensus 188 vnKg~al~~L~-~-~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~ 231 (245)
T PLN02423 188 WDKTYCLQFLE-D-FDEIHFFGDKTYEGGNDHEIFESERTIGHTVT 231 (245)
T ss_pred CCHHHHHHHhc-C-cCeEEEEeccCCCCCCcHHHHhCCCcceEEeC
Confidence 57888888888 5 678899999 8999999997 66688774
No 165
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=84.65 E-value=2.1 Score=45.29 Aligned_cols=52 Identities=15% Similarity=0.177 Sum_probs=44.0
Q ss_pred Cc-ccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhh
Q 003740 661 MR-PGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEF 712 (799)
Q Consensus 661 ~R-~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~ 712 (799)
+| |++.+++++|+++|+++.++|+-....+...-+++||...-+.++.+.+.
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv 198 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHK 198 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCcc
Confidence 67 99999999999999999999999999999999999998654455544444
No 166
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=84.15 E-value=2.8 Score=43.96 Aligned_cols=50 Identities=28% Similarity=0.383 Sum_probs=38.3
Q ss_pred eeecccCC----CcccHHHHHHHHHhCCCEEEEEcCCCHHH---HHHHHHHcCCccC
Q 003740 653 GIVGIKDP----MRPGVKESVAICRSAGITVRMVTGDNINT---AKAIARECGILTD 702 (799)
Q Consensus 653 g~~~~~D~----~R~~v~~aI~~l~~aGI~v~mlTGD~~~t---A~aiA~~~GI~~~ 702 (799)
|.+.-.+. +=|++.++|+.|+++|++++++||....+ .....+++|+...
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~~ 66 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDIS 66 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCCC
Confidence 44444455 78899999999999999999999977665 4555566787543
No 167
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=83.33 E-value=4.6 Score=42.25 Aligned_cols=89 Identities=19% Similarity=0.259 Sum_probs=54.8
Q ss_pred cCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHH---HHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecC
Q 003740 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIA---RECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSS 734 (799)
Q Consensus 658 ~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA---~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~s 734 (799)
+.|.=|++.+..+.+++.|++|+.+||.....-.+.. ++.|+.....+++.+..-. .....
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~~~~LiLR~~~D~----------------~~~~a 206 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHTWEKLILKDPQDN----------------SAENA 206 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCCcceeeecCCCCC----------------ccchh
Confidence 4566789999999999999999999999864322222 3468754322333221100 00001
Q ss_pred cccHHHHHHHHHHhCC-CEEEEEcCCccCH
Q 003740 735 PMDKHTLVKHLRTTLG-EVVAVTGDGTNDA 763 (799)
Q Consensus 735 P~dK~~lV~~Lq~~~G-~vVa~~GDG~NDa 763 (799)
.+-|...=+.+.+. | .+++.+||-.+|-
T Consensus 207 v~yKs~~R~~li~e-GYrIv~~iGDq~sDl 235 (275)
T TIGR01680 207 VEYKTAARAKLIQE-GYNIVGIIGDQWNDL 235 (275)
T ss_pred HHHHHHHHHHHHHc-CceEEEEECCCHHhc
Confidence 12344444555555 6 5899999999996
No 168
>PRK10444 UMP phosphatase; Provisional
Probab=83.11 E-value=3.6 Score=42.96 Aligned_cols=49 Identities=18% Similarity=0.281 Sum_probs=41.6
Q ss_pred eeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHc---CCcc
Q 003740 653 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAREC---GILT 701 (799)
Q Consensus 653 g~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~---GI~~ 701 (799)
|.+.-.+.+=|++.++++.|++.|++++++|+....+...+++++ |+.-
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~ 61 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVDV 61 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 555566778899999999999999999999999998888888774 6643
No 169
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=82.94 E-value=25 Score=43.13 Aligned_cols=159 Identities=20% Similarity=0.181 Sum_probs=79.0
Q ss_pred eCCeEEEEecCCCCcccEEEecCCCeecccEEEEeeceeEEecccccCCCCccccCCCCCEEEccceeeeceEEEEEEEE
Q 003740 244 RNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTV 323 (799)
Q Consensus 244 R~g~~~~i~~~~LvvGDiv~l~~Gd~vPaDg~ll~g~~l~vDeS~lTGEs~pv~k~~~~~~v~sGt~v~~G~~~~~V~~v 323 (799)
.-|....+...|.+|-|.+.++ |+..-+|=-.+.|++.-|+-. +|. .+ ..|. .+.+|+-..-=...+.=|..
T Consensus 111 v~GDiV~l~~Gd~IPaDg~vi~-g~~~~VDeS~LTGES~PV~K~--~~~--~v--~aGT-~v~~G~~~~~V~~tG~~T~~ 182 (755)
T TIGR01647 111 VPGDVVRLKIGDIVPADCRLFE-GDYIQVDQAALTGESLPVTKK--TGD--IA--YSGS-TVKQGEAEAVVTATGMNTFF 182 (755)
T ss_pred cCCCEEEECCCCEEeceEEEEe-cCceEEEcccccCCccceEec--cCC--ee--eccC-EEEccEEEEEEEEcCCccHH
Confidence 4677888999999999988885 444555666666766444432 121 11 2233 46666654432233333333
Q ss_pred cccchhHHHHHhhcCCC-CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcchHHHHHHHH
Q 003740 324 GMRTQWGKLMATLSEGG-DDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFA 402 (799)
Q Consensus 324 G~~T~~g~i~~~~~~~~-~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (799)
|. +.++++...... .-+..+.+....+......+++++.++.+ ......+.. .+...+.
T Consensus 183 g~---i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~----------------~~~~~i~ 242 (755)
T TIGR01647 183 GK---AAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLF-FGRGESFRE----------------GLQFALV 242 (755)
T ss_pred HH---HHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCHHH----------------HHHHHHH
Confidence 32 223333333222 22223333333443333332222222222 211111110 1334566
Q ss_pred HHHHHHHHHhCCchhHHHHHHHHHHHHH
Q 003740 403 IAVTIVVVAVPEGLPLAVTLSLAFAMKK 430 (799)
Q Consensus 403 ~av~ilvva~P~~Lplav~l~l~~~~~~ 430 (799)
..++..=.+.|..+|+++.++.....++
T Consensus 243 vlv~a~P~~Lp~~~~~~la~g~~r~ak~ 270 (755)
T TIGR01647 243 LLVGGIPIAMPAVLSVTMAVGAAELAKK 270 (755)
T ss_pred HHHHhCCcchHHHHHHHHHHHHHHHHhC
Confidence 6777777888888888888877655443
No 170
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=82.77 E-value=2.8 Score=44.42 Aligned_cols=51 Identities=20% Similarity=0.149 Sum_probs=42.2
Q ss_pred Cc-ccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchh
Q 003740 661 MR-PGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPE 711 (799)
Q Consensus 661 ~R-~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~ 711 (799)
+| |++.+++++|+++|+++.++|+-+...+..+.+..|+...-..++.+.+
T Consensus 148 irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~ 199 (303)
T PHA03398 148 IRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGYFDIIICGGR 199 (303)
T ss_pred cCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCccccEEEECCC
Confidence 46 8999999999999999999998888888999999999754444444444
No 171
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=82.39 E-value=5.9 Score=37.98 Aligned_cols=108 Identities=20% Similarity=0.267 Sum_probs=71.6
Q ss_pred eecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHH---HHc-----CCccCCceeecchhhhccCHHHHhhhcC
Q 003740 654 IVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIA---REC-----GILTDNGIAIEGPEFREKSDEELSKLIP 725 (799)
Q Consensus 654 ~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA---~~~-----GI~~~~~~~~~g~~~~~~~~~~~~~~~~ 725 (799)
++|- |-.++++.+.++.+++.|++++-+|+....-|...- .+. ++. .+.++..++ .+...+.
T Consensus 22 ~~G~-d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP--~Gpv~~sP~-------~l~~al~ 91 (157)
T PF08235_consen 22 ILGK-DWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLP--DGPVLLSPD-------SLFSALH 91 (157)
T ss_pred ccCc-hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCC--CCCEEECCc-------chhhhhh
Confidence 3443 689999999999999999999999999866554432 222 332 222222211 1111111
Q ss_pred CceEEEecCcccHHHHHHHHHHh----CCCEEEEEcCCccCHHhhhcCCee
Q 003740 726 KIQVMARSSPMDKHTLVKHLRTT----LGEVVAVTGDGTNDAPALHEADIG 772 (799)
Q Consensus 726 ~~~v~ar~sP~dK~~lV~~Lq~~----~G~vVa~~GDG~NDapAL~~AdVG 772 (799)
+ .+..+-.-+.|...++.++.. ....++..|...+|+.|-++++|-
T Consensus 92 r-Evi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 92 R-EVISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred c-cccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 0 144554557899999999875 257888999999999998877653
No 172
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=81.86 E-value=36 Score=43.18 Aligned_cols=194 Identities=13% Similarity=0.094 Sum_probs=99.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhh----h-cCceeEE----EeCCeEEEEecCCCCcccEEEecCCCeecccEEEEeece
Q 003740 211 LLVVFVTATSDYKQSLQFKDLDRE----K-KKITVQV----ARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFS 281 (799)
Q Consensus 211 llv~~~~~~~~~~~~~~~~~l~~~----~-~~~~v~V----~R~g~~~~i~~~~LvvGDiv~l~~Gd~vPaDg~ll~g~~ 281 (799)
.++.+..-.......+++.++... . +.....| +.-|....+...|.+|.|.+.++..+ +=+|=-.+.|++
T Consensus 118 ~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~IPaD~~il~~~~-l~VdeS~LTGES 196 (997)
T TIGR01106 118 GCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQG-CKVDNSSLTGES 196 (997)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCEEeeeEEEEEccC-cEEEccccCCCC
Confidence 334455555666666666665331 1 1212222 24688899999999999999997653 446666677776
Q ss_pred eEEecccccCCCCccccC----CCCCEEEccceeeeceEEEEEEEEcccchhHHHHHhhcCC-CCCCChhHHHHHHHHHH
Q 003740 282 VLINESSLTGESEPVNVN----ALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEG-GDDETPLQVKLNGVATI 356 (799)
Q Consensus 282 l~vDeS~lTGEs~pv~k~----~~~~~v~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~-~~~~tplq~~l~~~a~~ 356 (799)
.-+.-..-..+..|.... .+. .+.+|+...-=...+.=|..|.-. ++++..... ..-...+.+..+.+..+
T Consensus 197 ~pv~K~~~~~~~~~~~~~n~l~~Gt-~v~~G~~~~~V~~tG~~T~~g~i~---~~~~~~~~~~~pl~~~~~~~~~~~~~~ 272 (997)
T TIGR01106 197 EPQTRSPEFTHENPLETRNIAFFST-NCVEGTARGIVVNTGDRTVMGRIA---SLASGLENGKTPIAIEIEHFIHIITGV 272 (997)
T ss_pred CceeccCCCcccCccccCCeEEecc-EeeeeeEEEEEEEccccchhhHHH---hhhhhcccCCCcHHHHHHHHHHHHHHH
Confidence 444332211111222221 344 477776433222334445555433 333222221 22234555666667666
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcchHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHH
Q 003740 357 IGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFA 427 (799)
Q Consensus 357 ~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvva~P~~Lplav~l~l~~~ 427 (799)
...+++++.++.++.. ..+.. .+...+...++.+=.+.|..++++...+....
T Consensus 273 ~~~~~~~~~~~~~~~~-~~~~~-----------------~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m 325 (997)
T TIGR01106 273 AVFLGVSFFILSLILG-YTWLE-----------------AVIFLIGIIVANVPEGLLATVTVCLTLTAKRM 325 (997)
T ss_pred HHHHHHHHHHHHHHhc-CCHHH-----------------HHHHHHHHHhhcCCccchHHHHHHHHHHHHHH
Confidence 5555554444433221 11110 12223444555566677888888887765543
No 173
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=81.70 E-value=66 Score=41.09 Aligned_cols=107 Identities=14% Similarity=0.142 Sum_probs=58.0
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHhhhcccCCCCCcc-hh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCceeEE
Q 003740 165 VYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAH-DG-LGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQV 242 (799)
Q Consensus 165 ~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~~~~~-d~-~~i~~~illv~~~~~~~~~~~~~~~~~l~~~~~~~~v~V 242 (799)
+.+|+-|.+-....+.+.-+++.++ |+ +. +...+++++++++.....++++++..+ .+....
T Consensus 162 ~s~~~ll~~~~~~p~~i~~i~~~~l----------~~~~~~~~~~~~i~~i~~~~~~~~~~~~~k~~~---~L~~~~--- 225 (1054)
T TIGR01657 162 PSFLELLKEEVLHPFYVFQVFSVIL----------WLLDEYYYYSLCIVFMSSTSISLSVYQIRKQMQ---RLRDMV--- 225 (1054)
T ss_pred CCHHHHHHHHHhchHHHHHHHHHHH----------HHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHhh---
Confidence 3455555554444444444444332 33 33 233344555555555555555544322 222321
Q ss_pred EeCCeEEEEecCCCCcccEEEecCCCeecccEEEEe---eceeEEecccccCC
Q 003740 243 ARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVS---GFSVLINESSLTGE 292 (799)
Q Consensus 243 ~R~g~~~~i~~~~LvvGDiv~l~~Gd~vPaDg~ll~---g~~l~vDeS~lTGE 292 (799)
.......| +.-|....+..-|.+|-|.++++ |..+-+|=-.+.|+
T Consensus 226 -~~~~~v~V----~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g~ 273 (1054)
T TIGR01657 226 -HKPQSVIV----IRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGS 273 (1054)
T ss_pred -cCCeeEEE----EECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeCc
Confidence 11222222 23588899999999999999997 65566676667773
No 174
>PLN03017 trehalose-phosphatase
Probab=81.13 E-value=19 Score=39.55 Aligned_cols=47 Identities=21% Similarity=0.140 Sum_probs=37.4
Q ss_pred CcceeeeeecccC--CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHH
Q 003740 647 EGYTCIGIVGIKD--PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIA 694 (799)
Q Consensus 647 ~~~~~lg~~~~~D--~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA 694 (799)
-|.||+-++.-.| .+-++..++|++|. .|+.|.++||........+.
T Consensus 118 ~DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~ 166 (366)
T PLN03017 118 YDGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV 166 (366)
T ss_pred cCCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh
Confidence 4566665554333 47789999999999 78999999999999998884
No 175
>PF00403 HMA: Heavy-metal-associated domain; InterPro: IPR006121 Proteins that transport heavy metals in micro-organisms and mammals share similarities in their sequences and structures. These proteins provide an important focus for research, some being involved in bacterial resistance to toxic metals, such as lead and cadmium, while others are involved in inherited human syndromes, such as Wilson's and Menke's diseases []. A conserved domain has been found in a number of these heavy metal transport or detoxification proteins []. The domain, which has been termed Heavy-Metal-Associated (HMA), contains two conserved cysteines that are probably involved in metal binding. Structure solution of the fourth HMA domain of the Menke's copper transporting ATPase shows a well-defined structure comprising a four-stranded antiparallel beta-sheet and two alpha helices packed in an alpha-beta sandwich fold []. This fold is common to other domains and is classified as "ferredoxin-like".; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2VOY_A 1P6T_A 1KQK_A 2RML_A 1JWW_A 3K7R_F 1FES_A 1CC8_A 1FD8_A 2GGP_A ....
Probab=80.95 E-value=0.12 Score=41.14 Aligned_cols=53 Identities=11% Similarity=0.208 Sum_probs=45.1
Q ss_pred cccchhhHHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCCccccccccccCCcc
Q 003740 43 ANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQ 97 (799)
Q Consensus 43 ~~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 97 (799)
..|.++.++++.+.+++..+.+++...++.+.|+.. ..+..++...++++||.
T Consensus 10 ~~C~~~v~~~l~~~~GV~~v~vd~~~~~v~v~~~~~--~~~~~~i~~~i~~~Gy~ 62 (62)
T PF00403_consen 10 EGCAKKVEKALSKLPGVKSVKVDLETKTVTVTYDPD--KTSIEKIIEAIEKAGYE 62 (62)
T ss_dssp HHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEESTT--TSCHHHHHHHHHHTTSE
T ss_pred HHHHHHHHHHHhcCCCCcEEEEECCCCEEEEEEecC--CCCHHHHHHHHHHhCcC
Confidence 456778899999999999999999999999999776 45567888888888884
No 176
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=79.64 E-value=3.3 Score=42.38 Aligned_cols=96 Identities=16% Similarity=0.201 Sum_probs=70.3
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccH
Q 003740 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (799)
Q Consensus 659 D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK 738 (799)
.++.||+.+.+++|++.|+.+...|+-....+..+....|+...-..++.+.+... ..=.|+
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~~~v~~~dv~~----------------~KP~Pd-- 146 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFDVIVTADDVAR----------------GKPAPD-- 146 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcchhccHHHHhc----------------CCCCCH--
Confidence 47799999999999999999999999999999999999999876555555554321 112222
Q ss_pred HHHHHHHHHh--CCCEEEEEcCCccCHHhhhcCCeee
Q 003740 739 HTLVKHLRTT--LGEVVAVTGDGTNDAPALHEADIGL 773 (799)
Q Consensus 739 ~~lV~~Lq~~--~G~vVa~~GDG~NDapAL~~AdVGi 773 (799)
-+..+.++. ....+.++.|..|...|-++|+.-+
T Consensus 147 -~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~v 182 (221)
T COG0637 147 -IYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRV 182 (221)
T ss_pred -HHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEE
Confidence 333334332 1356778889999888888888644
No 177
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=78.90 E-value=2.1 Score=41.54 Aligned_cols=87 Identities=16% Similarity=0.079 Sum_probs=59.9
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccC-CceeecchhhhccCHHHHhhhcCCceEEEecC-ccc
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD-NGIAIEGPEFREKSDEELSKLIPKIQVMARSS-PMD 737 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~s-P~d 737 (799)
-.||++.+.++.|.+. ..+.+.|--....|..+...++.... -.. +++|-+ ...
T Consensus 42 ~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~~~~f~~-----------------------~l~r~~~~~~ 97 (162)
T TIGR02251 42 FKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRGGKVISR-----------------------RLYRESCVFT 97 (162)
T ss_pred EECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcCCCEEeE-----------------------EEEccccEEe
Confidence 4699999999999988 99999999999999999999987431 011 111111 111
Q ss_pred HHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCe
Q 003740 738 KHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADI 771 (799)
Q Consensus 738 K~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdV 771 (799)
|..+++.|... | ..|.|+||...|..+=+++.|
T Consensus 98 ~~~~~K~L~~l-~~~~~~vIiVDD~~~~~~~~~~NgI 133 (162)
T TIGR02251 98 NGKYVKDLSLV-GKDLSKVIIIDNSPYSYSLQPDNAI 133 (162)
T ss_pred CCCEEeEchhc-CCChhhEEEEeCChhhhccCccCEe
Confidence 11245555543 4 568999999988866555544
No 178
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=78.72 E-value=8.4 Score=40.92 Aligned_cols=49 Identities=18% Similarity=0.246 Sum_probs=35.9
Q ss_pred eeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHH---HHHHHcCCcc
Q 003740 653 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAK---AIARECGILT 701 (799)
Q Consensus 653 g~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~---aiA~~~GI~~ 701 (799)
|.+.-.+.+=|++.++|+.|++.|++++.+|+....+.. .--+++|+..
T Consensus 11 Gtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~ 62 (279)
T TIGR01452 11 GVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNG 62 (279)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 334445667789999999999999999999996543332 2336688854
No 179
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=77.24 E-value=65 Score=40.49 Aligned_cols=80 Identities=19% Similarity=0.088 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCceeEEEeCCeEEEEecCCCCcccEEEecCCCeecccEEEEeec-ee
Q 003740 204 LGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGF-SV 282 (799)
Q Consensus 204 ~~i~~~illv~~~~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~i~~~~LvvGDiv~l~~Gd~vPaDg~ll~g~-~l 282 (799)
..-.+.++++++++++..++++++.++..+.+..... -+ ..| +.-|....+..-|.+|-|-++++.. .+
T Consensus 36 ~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~-----~~-~~V----iRdg~~~~I~~~~Lv~GDiv~l~~Gd~I 105 (917)
T TIGR01116 36 FVEPFVILLILVANAIVGVWQERNAEKAIEALKEYES-----EH-AKV----LRDGRWSVIKAKDLVPGDIVELAVGDKV 105 (917)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-----Cc-eEE----EECCEEEEEEHHHCCCCCEEEECCCCEe
Confidence 3344556666677777777777776665555554211 11 122 2337788888888888888888743 34
Q ss_pred EEecccccCCC
Q 003740 283 LINESSLTGES 293 (799)
Q Consensus 283 ~vDeS~lTGEs 293 (799)
-.|=-.+.|++
T Consensus 106 PaD~~ll~~~~ 116 (917)
T TIGR01116 106 PADIRVLSLKT 116 (917)
T ss_pred eccEEEEEecc
Confidence 44555555543
No 180
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=75.99 E-value=6 Score=40.87 Aligned_cols=90 Identities=11% Similarity=0.121 Sum_probs=55.6
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++-||+.++++.|++. +++.++|.-+.. .+..|+...-+.++...+. .+..|. ..
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~~fd~i~~~~~~------------------~~~KP~-p~ 167 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGDYFEFVLRAGPH------------------GRSKPF-SD 167 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHHhhceeEecccC------------------CcCCCc-HH
Confidence 4568999999999975 888899886654 2567775322222222211 112232 22
Q ss_pred HHHHHHHHhCC---CEEEEEcCC-ccCHHhhhcCCeeeec
Q 003740 740 TLVKHLRTTLG---EVVAVTGDG-TNDAPALHEADIGLAM 775 (799)
Q Consensus 740 ~lV~~Lq~~~G---~vVa~~GDG-~NDapAL~~AdVGiam 775 (799)
-+...+++. | +-+.||||. ..|..+-+.|++-...
T Consensus 168 ~~~~a~~~~-~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~ 206 (238)
T PRK10748 168 MYHLAAEKL-NVPIGEILHVGDDLTTDVAGAIRCGMQACW 206 (238)
T ss_pred HHHHHHHHc-CCChhHEEEEcCCcHHHHHHHHHCCCeEEE
Confidence 233333333 4 569999999 5999998999875443
No 181
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=75.05 E-value=5.8 Score=41.38 Aligned_cols=50 Identities=14% Similarity=0.082 Sum_probs=40.1
Q ss_pred eeecccCCCcccHHHHHHHHHhCCCEEEEEcC---CCHHHHHHHHHHcCCccC
Q 003740 653 GIVGIKDPMRPGVKESVAICRSAGITVRMVTG---DNINTAKAIARECGILTD 702 (799)
Q Consensus 653 g~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTG---D~~~tA~aiA~~~GI~~~ 702 (799)
|.+.-.+.+=|++.++|+.|++.|++++++|| ..........+++|+...
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~ 62 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPAT 62 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC
Confidence 34444566668999999999999999999996 667777888888998643
No 182
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=73.14 E-value=11 Score=34.84 Aligned_cols=32 Identities=16% Similarity=0.163 Sum_probs=28.7
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEEcCCCHHHH
Q 003740 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTA 690 (799)
Q Consensus 659 D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA 690 (799)
+++.+++.++++.+++.|+.++++||......
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~ 54 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTY 54 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhh
Confidence 67899999999999999999999999987543
No 183
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=73.09 E-value=2.7 Score=40.88 Aligned_cols=83 Identities=14% Similarity=0.094 Sum_probs=53.3
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++.||+.++++ ++.++|.-+......+-+.+||...-+.++.+++. ....|.-.
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~------------------~~~KP~p~- 143 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYFDRAFSVDTV------------------RAYKPDPV- 143 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHHhhhccHhhc------------------CCCCCCHH-
Confidence 46889999998 36789999988888899999986432223333321 11223222
Q ss_pred HHHHHHHHhCC---CEEEEEcCCccCHHhhhcC
Q 003740 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEA 769 (799)
Q Consensus 740 ~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~A 769 (799)
-+...+++. | +.+.||||...|..+-+++
T Consensus 144 ~f~~~~~~~-~~~p~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 144 VYELVFDTV-GLPPDRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred HHHHHHHHH-CCCHHHeEeEecChhhHHHHhcC
Confidence 223333333 3 5689999999998876653
No 184
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=72.51 E-value=16 Score=42.05 Aligned_cols=98 Identities=13% Similarity=0.042 Sum_probs=62.9
Q ss_pred CcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHH-cCCccCCceeecchhhhccCHHHHhhhcCCceEEEe------c
Q 003740 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARE-CGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMAR------S 733 (799)
Q Consensus 661 ~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~-~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar------~ 733 (799)
+++++.+.+ ++.|- ++++|+=...-++.+|++ +|+.. ++ |.+++.- .+=.+-++ +
T Consensus 111 l~~~a~~~~---~~~g~-~vvVSASp~~~Vepfa~~~LGid~----VI-gTeLev~---------~~G~~TG~i~g~~~c 172 (497)
T PLN02177 111 VHPETWRVF---NSFGK-RYIITASPRIMVEPFVKTFLGADK----VL-GTELEVS---------KSGRATGFMKKPGVL 172 (497)
T ss_pred cCHHHHHHH---HhCCC-EEEEECCcHHHHHHHHHHcCCCCE----EE-ecccEEC---------cCCEEeeeecCCCCC
Confidence 677755544 55675 499999999999999988 89862 11 1111100 00002222 2
Q ss_pred CcccHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCeeeecCC
Q 003740 734 SPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGI 777 (799)
Q Consensus 734 sP~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdVGiamgi 777 (799)
.-++|..-++..... ......-||..||.|+|+.||-..+.+.
T Consensus 173 ~Ge~Kv~rl~~~~g~-~~~~~aYgDS~sD~plL~~a~e~y~V~~ 215 (497)
T PLN02177 173 VGDHKRDAVLKEFGD-ALPDLGLGDRETDHDFMSICKEGYMVPR 215 (497)
T ss_pred ccHHHHHHHHHHhCC-CCceEEEECCccHHHHHHhCCccEEeCC
Confidence 345688888744321 1223678999999999999999999883
No 185
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=70.50 E-value=17 Score=36.86 Aligned_cols=90 Identities=19% Similarity=0.238 Sum_probs=60.9
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHH
Q 003740 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~ 739 (799)
++-|++.++++.+++. +++.++|--....+....+++||...-+.++...+ .+..-| ++.
T Consensus 99 ~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v~~s~~------------------~g~~KP-~~~ 158 (229)
T COG1011 99 PDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDYFDAVFISED------------------VGVAKP-DPE 158 (229)
T ss_pred ccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhhhheEEEecc------------------cccCCC-CcH
Confidence 5578899999999988 99999999888888999999997654333322222 123344 334
Q ss_pred HHHHHHHHhCC---CEEEEEcCC-ccC-HHhhhcCCe
Q 003740 740 TLVKHLRTTLG---EVVAVTGDG-TND-APALHEADI 771 (799)
Q Consensus 740 ~lV~~Lq~~~G---~vVa~~GDG-~ND-apAL~~AdV 771 (799)
-+-..+++. | +.++||||. .|| .+| ++++.
T Consensus 159 ~f~~~~~~~-g~~p~~~l~VgD~~~~di~gA-~~~G~ 193 (229)
T COG1011 159 IFEYALEKL-GVPPEEALFVGDSLENDILGA-RALGM 193 (229)
T ss_pred HHHHHHHHc-CCCcceEEEECCChhhhhHHH-HhcCc
Confidence 445555544 5 469999995 678 455 44444
No 186
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=70.49 E-value=13 Score=36.58 Aligned_cols=96 Identities=25% Similarity=0.322 Sum_probs=61.7
Q ss_pred CcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCH---HHHhhh---cCCceEEEecC
Q 003740 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSD---EELSKL---IPKIQVMARSS 734 (799)
Q Consensus 661 ~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~---~~~~~~---~~~~~v~ar~s 734 (799)
+.|++.+++..++++|.+++|+|- +-||... -+++.+|..+.. ..+.+. ++.+ .+|.-.
T Consensus 32 ~~~g~i~al~~l~~~gy~lVvvTN-----------QsGi~rg---yf~~~~f~~~~~~m~~~l~~~gv~id~i-~~Cph~ 96 (181)
T COG0241 32 FIPGVIPALLKLQRAGYKLVVVTN-----------QSGIGRG---YFTEADFDKLHNKMLKILASQGVKIDGI-LYCPHH 96 (181)
T ss_pred cCccHHHHHHHHHhCCCeEEEEEC-----------CCCcccc---CccHHHHHHHHHHHHHHHHHcCCccceE-EECCCC
Confidence 368999999999999999999995 3455432 233444443322 111111 1222 455555
Q ss_pred ccc--------HHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCee
Q 003740 735 PMD--------KHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG 772 (799)
Q Consensus 735 P~d--------K~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdVG 772 (799)
|++ ...+.+.+++. + ....||||-..|..+-..|++.
T Consensus 97 p~~~c~cRKP~~gm~~~~~~~~-~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 97 PEDNCDCRKPKPGMLLSALKEY-NIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred CCCCCcccCCChHHHHHHHHHh-CCCccceEEecCcHHHHHHHHHCCCC
Confidence 554 34555566554 6 6788999999999988887775
No 187
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=69.93 E-value=16 Score=42.36 Aligned_cols=40 Identities=18% Similarity=0.292 Sum_probs=32.9
Q ss_pred CcccHHHHHHHHHhCCCEEEEEcCCCH------------HHHHHHHHHcCCc
Q 003740 661 MRPGVKESVAICRSAGITVRMVTGDNI------------NTAKAIARECGIL 700 (799)
Q Consensus 661 ~R~~v~~aI~~l~~aGI~v~mlTGD~~------------~tA~aiA~~~GI~ 700 (799)
+-|++.++++.|+++|++++++|.=.. ..+.++.+++|+.
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip 249 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP 249 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc
Confidence 469999999999999999999997444 3467777888874
No 188
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=69.85 E-value=1.9e+02 Score=36.26 Aligned_cols=159 Identities=13% Similarity=0.046 Sum_probs=87.2
Q ss_pred eCCeEEEEecCCCCcccEEEecCCCeecccEEEEeeceeEEeccccc------------CCCCcc-c----cCCCCCEEE
Q 003740 244 RNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLT------------GESEPV-N----VNALNPFLL 306 (799)
Q Consensus 244 R~g~~~~i~~~~LvvGDiv~l~~Gd~vPaDg~ll~g~~l~vDeS~lT------------GEs~pv-~----k~~~~~~v~ 306 (799)
.-|....+...|.+|-|.+.++. ..+=+|=-.+.|++.-|+-...+ ++..+. . ...|. ++.
T Consensus 173 v~GDiV~l~~Gd~IPaDg~li~g-~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT-~V~ 250 (903)
T PRK15122 173 VPGDIVHLSAGDMIPADVRLIES-RDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGT-NVV 250 (903)
T ss_pred CCCCEEEECCCCEEeeeEEEEEc-CceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCC-EEE
Confidence 36788999999999999998874 34566766777777555544321 222111 1 12444 577
Q ss_pred ccceeeeceEEEEEEEEcccchhHHHHHhhcCCCCC---CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccC
Q 003740 307 SGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDD---ETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQE 383 (799)
Q Consensus 307 sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~---~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~ 383 (799)
+|+-..-=...+.=|..|.=. +++..-.....- -.++.+.+..++.++.++.++++.+...-|. .
T Consensus 251 ~G~~~~~V~atG~~T~~gkI~---~~v~~~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~~~~~~-~-------- 318 (903)
T PRK15122 251 SGTATAVVVATGSRTYFGSLA---KSIVGTRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFTKGDWL-E-------- 318 (903)
T ss_pred eeeEEEEEEEeccccHhhHHH---HHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCHH-H--------
Confidence 787544323333333333221 111111111111 1346677788888887777666544321111 0
Q ss_pred CCccccCCcchHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHH
Q 003740 384 GTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAM 428 (799)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~av~ilvva~P~~Lplav~l~l~~~~ 428 (799)
.+...+..+++..-.+.|..+++++..+.....
T Consensus 319 ------------~l~~aisl~V~~~Pe~Lp~~vt~~La~g~~~ma 351 (903)
T PRK15122 319 ------------ALLFALAVAVGLTPEMLPMIVSSNLAKGAIAMA 351 (903)
T ss_pred ------------HHHHHHHHHHHHccchHHHHHHHHHHHHHHHHH
Confidence 123345666777777778878888877654444
No 189
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=67.04 E-value=2e+02 Score=36.02 Aligned_cols=43 Identities=19% Similarity=0.188 Sum_probs=31.6
Q ss_pred eCCeEEEEecCCCCcccEEEecCCCeecccEEEEeeceeEEecc
Q 003740 244 RNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINES 287 (799)
Q Consensus 244 R~g~~~~i~~~~LvvGDiv~l~~Gd~vPaDg~ll~g~~l~vDeS 287 (799)
.-|....+...|.+|-|.+.++ |..+=+|=-.+.|++.-|+-.
T Consensus 184 vpGDiV~l~~Gd~IPaDg~li~-g~~l~VDES~LTGES~PV~K~ 226 (902)
T PRK10517 184 VPGDIIKLAAGDMIPADLRILQ-ARDLFVAQASLTGESLPVEKF 226 (902)
T ss_pred CCCCEEEECCCCEEeeeEEEEE-cCceEEEecCcCCCCCceecc
Confidence 3678889999999999998886 444566777777777555443
No 190
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=66.61 E-value=17 Score=35.25 Aligned_cols=86 Identities=21% Similarity=0.305 Sum_probs=60.6
Q ss_pred CcccHHHHHHHHHhCCCEEEEEcCCCH----HHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCc-
Q 003740 661 MRPGVKESVAICRSAGITVRMVTGDNI----NTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP- 735 (799)
Q Consensus 661 ~R~~v~~aI~~l~~aGI~v~mlTGD~~----~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP- 735 (799)
+++=+++.|..-++.|=.+..+||..+ .+++.+|+...|.+.+.. .|+...|
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~pv-----------------------~f~Gdk~k 171 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMNPV-----------------------IFAGDKPK 171 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCcce-----------------------eeccCCCC
Confidence 466788899999999999999999875 466777888888654333 3444333
Q ss_pred ccHHHHHHHHHHhCCCEEEEEcCCccCHHhhhcCCe
Q 003740 736 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI 771 (799)
Q Consensus 736 ~dK~~lV~~Lq~~~G~vVa~~GDG~NDapAL~~AdV 771 (799)
-.+..=.+.+|++ .+-..-||.-||.-|-|+|++
T Consensus 172 ~~qy~Kt~~i~~~--~~~IhYGDSD~Di~AAkeaG~ 205 (237)
T COG3700 172 PGQYTKTQWIQDK--NIRIHYGDSDNDITAAKEAGA 205 (237)
T ss_pred cccccccHHHHhc--CceEEecCCchhhhHHHhcCc
Confidence 1222233445544 455688999999999999876
No 191
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=65.19 E-value=1.3e+02 Score=37.67 Aligned_cols=42 Identities=14% Similarity=0.193 Sum_probs=31.6
Q ss_pred eCCeEEEEecCCCCcccEEEecCCCeecccEEEEeeceeEEec
Q 003740 244 RNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINE 286 (799)
Q Consensus 244 R~g~~~~i~~~~LvvGDiv~l~~Gd~vPaDg~ll~g~~l~vDe 286 (799)
.-|....+...|.+|-|.+.++ |.-+=+|=-.+.|++.-|+-
T Consensus 150 v~GDiV~l~~Gd~VPaDg~li~-g~~l~VDES~LTGES~PV~K 191 (867)
T TIGR01524 150 VPGDLIELAAGDIIPADARVIS-ARDLFINQSALTGESLPVEK 191 (867)
T ss_pred CCCCEEEECCCCEEcccEEEEe-cCceEEEcccccCCCCcccc
Confidence 3578899999999999998886 44456677778887754543
No 192
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=64.46 E-value=2.3e+02 Score=35.53 Aligned_cols=163 Identities=12% Similarity=0.050 Sum_probs=81.3
Q ss_pred CCeEEEEecCCCCcccEEEecCCCeecccEEEEeeceeEEeccccc--CCC--Ccccc----CCCCCEEEccceeeeceE
Q 003740 245 NGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLT--GES--EPVNV----NALNPFLLSGTKVQNGSC 316 (799)
Q Consensus 245 ~g~~~~i~~~~LvvGDiv~l~~Gd~vPaDg~ll~g~~l~vDeS~lT--GEs--~pv~k----~~~~~~v~sGt~v~~G~~ 316 (799)
-|....+...|.+|-|.+.++.. ..=+|=-.+.|++.-|+-..-. ++. .+..+ ..|. .+.+|+-..-=..
T Consensus 137 ~GDiv~l~~Gd~IPaDg~ii~g~-~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT-~v~~G~~~~~V~~ 214 (884)
T TIGR01522 137 PGDLVCLSVGDRVPADLRIVEAV-DLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGT-LVRCGHGKGIVVG 214 (884)
T ss_pred cCCEEEecCCCEEeeeEEEEEcC-ceEEEcccccCCCcceecccccccccccccccccCceEEeCC-EEEeeeEEEEEEE
Confidence 57788899999999999998743 3446777777776444433211 111 01111 1344 4777764433223
Q ss_pred EEEEEEEcccchhHHHHHhhcCCCC-CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcchH
Q 003740 317 KMLVTTVGMRTQWGKLMATLSEGGD-DETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDAL 395 (799)
Q Consensus 317 ~~~V~~vG~~T~~g~i~~~~~~~~~-~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 395 (799)
.+.=|..|. +.++++...+... -...+.+....+......++.++.++.++.- ..+. .
T Consensus 215 tG~~T~~gk---i~~~v~~~~~~kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~---------------- 273 (884)
T TIGR01522 215 TGSNTEFGA---VFKMMQAIEKPKTPLQKSMDLLGKQLSLVSFGVIGVICLVGWFQG-KDWL-E---------------- 273 (884)
T ss_pred ecCccHHHH---HHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCHH-H----------------
Confidence 333344442 2233333333222 2223333334444333222222233333221 0000 0
Q ss_pred HHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHH
Q 003740 396 EILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKK 430 (799)
Q Consensus 396 ~~~~~~~~av~ilvva~P~~Lplav~l~l~~~~~~ 430 (799)
.+...+..+++.+-.+.|.++++++..+.....++
T Consensus 274 ~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~ak~ 308 (884)
T TIGR01522 274 MFTISVSLAVAAIPEGLPIIVTVTLALGVLRMSKK 308 (884)
T ss_pred HHHHHHHHHHHHccchHHHHHHHHHHHHHHHHhhc
Confidence 12334556666677788888888888887765544
No 193
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=63.76 E-value=3.3e+02 Score=32.90 Aligned_cols=34 Identities=12% Similarity=0.087 Sum_probs=21.6
Q ss_pred cc-EEEecCCCeecccEEEEe-eceeEEecccccCC
Q 003740 259 GD-IVHLCMGDQVPADGLFVS-GFSVLINESSLTGE 292 (799)
Q Consensus 259 GD-iv~l~~Gd~vPaDg~ll~-g~~l~vDeS~lTGE 292 (799)
|. ...+...+.+|-|-++++ |+.+-+|=-.+.|+
T Consensus 112 g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG~ 147 (679)
T PRK01122 112 PGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGV 147 (679)
T ss_pred CCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEcc
Confidence 44 566777777777777776 44455565555564
No 194
>PTZ00445 p36-lilke protein; Provisional
Probab=63.07 E-value=14 Score=37.10 Aligned_cols=135 Identities=18% Similarity=0.218 Sum_probs=78.2
Q ss_pred HHHHHHHHHHHHhccceeeEEEEEcCCCCCCCCCCCCCcceeeeee--cccCC----------CcccHHHHHHHHHhCCC
Q 003740 610 NHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIV--GIKDP----------MRPGVKESVAICRSAGI 677 (799)
Q Consensus 610 ~~~~~~~~~~a~~g~r~l~~a~~~~~~~~~~~~~~~~~~~~~lg~~--~~~D~----------~R~~v~~aI~~l~~aGI 677 (799)
+......+.+.+.|.|++++- -|.|++++- |.-+| ++|+.+.-++.|+++||
T Consensus 29 ~~~~~~v~~L~~~GIk~Va~D----------------~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~~I 92 (219)
T PTZ00445 29 ESADKFVDLLNECGIKVIASD----------------FDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNSNI 92 (219)
T ss_pred HHHHHHHHHHHHcCCeEEEec----------------chhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHCCC
Confidence 345566777888999998873 234444411 13333 79999999999999999
Q ss_pred EEEEEcCCCHHHHHHHHHHcCCcc-CCceeecchhhhccCHH--HHhhhcCCceEEE------------------ecCcc
Q 003740 678 TVRMVTGDNINTAKAIARECGILT-DNGIAIEGPEFREKSDE--ELSKLIPKIQVMA------------------RSSPM 736 (799)
Q Consensus 678 ~v~mlTGD~~~tA~aiA~~~GI~~-~~~~~~~g~~~~~~~~~--~~~~~~~~~~v~a------------------r~sP~ 736 (799)
+|.++|=-...+ |.. .....+.|.++-+..-+ .....+.+ |+| .-.|+
T Consensus 93 ~v~VVTfSd~~~---------~~~~~~~~~Isg~~li~~~lk~s~~~~~i~~--~~~yyp~~w~~p~~y~~~gl~KPdp~ 161 (219)
T PTZ00445 93 KISVVTFSDKEL---------IPSENRPRYISGDRMVEAALKKSKCDFKIKK--VYAYYPKFWQEPSDYRPLGLDAPMPL 161 (219)
T ss_pred eEEEEEccchhh---------ccccCCcceechHHHHHHHHHhcCccceeee--eeeeCCcccCChhhhhhhcccCCCcc
Confidence 999999655443 221 12345566655432111 01111111 222 11344
Q ss_pred cHHHHHHHHHHhCC---CEEEEEcCCccCHHhhhcCCe
Q 003740 737 DKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADI 771 (799)
Q Consensus 737 dK~~lV~~Lq~~~G---~vVa~~GDG~NDapAL~~AdV 771 (799)
-|.--.+.+.+++| +-++++=|....+.+-++.++
T Consensus 162 iK~yHle~ll~~~gl~peE~LFIDD~~~NVeaA~~lGi 199 (219)
T PTZ00445 162 DKSYHLKQVCSDFNVNPDEILFIDDDMNNCKNALKEGY 199 (219)
T ss_pred chHHHHHHHHHHcCCCHHHeEeecCCHHHHHHHHHCCC
Confidence 54443455555534 467888888887777666443
No 195
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=61.90 E-value=15 Score=37.88 Aligned_cols=51 Identities=25% Similarity=0.366 Sum_probs=33.5
Q ss_pred EEEecCcccHHHHHHHHHHhCCC------EEEEEcCCccCHHhhhcC------CeeeecCCCCC
Q 003740 729 VMARSSPMDKHTLVKHLRTTLGE------VVAVTGDGTNDAPALHEA------DIGLAMGIAGT 780 (799)
Q Consensus 729 v~ar~sP~dK~~lV~~Lq~~~G~------vVa~~GDG~NDapAL~~A------dVGiamgi~gt 780 (799)
|-.|..-..|...|+.|.+..+. .++++||...|-.|++.. ++++.+| +++
T Consensus 157 vEvrp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~-~~~ 219 (235)
T PF02358_consen 157 VEVRPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVG-SVS 219 (235)
T ss_dssp EEEE-TT--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES----
T ss_pred EEEEeCCCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEE-eec
Confidence 44455556699999998877443 699999999999988763 6788888 544
No 196
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=61.39 E-value=1.1e+02 Score=30.97 Aligned_cols=195 Identities=13% Similarity=0.139 Sum_probs=97.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhcCceeEEEeCCeEEEEecCCCCcccEEEecCCCeecccEEEEeece-eEEeccc
Q 003740 210 ILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFS-VLINESS 288 (799)
Q Consensus 210 illv~~~~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~i~~~~LvvGDiv~l~~Gd~vPaDg~ll~g~~-l~vDeS~ 288 (799)
+++++++..+.+++++++.++..+.++... ..+...+ +.-|....+...|.+|-|.+++.... +-.|=-.
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~v----~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~l 72 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLN-----PQKKVTV----IRDGRWQKIPSSELVPGDIIILKAGDIVPADGIL 72 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTS-----SSEEEEE----EETTEEEEEEGGGT-TTSEEEEETTEBESSEEEE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccC-----CCccEEE----EeccccccchHhhccceeeeecccccccccCccc
Confidence 455666666667777766665555454422 1221333 23379999999999999999998543 2222222
Q ss_pred cc-CCCCcccc---CCCCCEE-E-----ccceeeeceEEEEEEEEcccchhH--HHHHhhcCCCCCCChhHHHHHHHHHH
Q 003740 289 LT-GESEPVNV---NALNPFL-L-----SGTKVQNGSCKMLVTTVGMRTQWG--KLMATLSEGGDDETPLQVKLNGVATI 356 (799)
Q Consensus 289 lT-GEs~pv~k---~~~~~~v-~-----sGt~v~~G~~~~~V~~vG~~T~~g--~i~~~~~~~~~~~tplq~~l~~~a~~ 356 (799)
+. |...--+- .+..|.- . .|..+..|+...-=...|.-+..| .....+.+......+-...+++....
T Consensus 73 l~~g~~~vd~s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (230)
T PF00122_consen 73 LESGSAYVDESALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNK 152 (230)
T ss_dssp EESSEEEEECHHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHH
T ss_pred eeccccccccccccccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHH
Confidence 22 21111000 0123322 2 688888887544333333333333 33333333333323334566666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcchHHHH----HHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHh
Q 003740 357 IGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEIL----EFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMM 432 (799)
Q Consensus 357 ~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~av~ilvva~P~~Lplav~l~l~~~~~~l~ 432 (799)
+..+.+.+.++.+++.++ + .+. ..+...+...+..+=...|.++++++..+.....
T Consensus 153 ~~~~~~~~~~~~~~~~~~--~------------------~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~ 212 (230)
T PF00122_consen 153 IAKILIIIILAIAILVFI--I------------------WFFNDSGISFFKSFLFAISLLIVLIPCALPLALPLSLAIAA 212 (230)
T ss_dssp HHHHHHHHHHHHHHHHHH--H------------------CHTGSTTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHH
T ss_pred HHHHHHhcccccchhhhc--c------------------ceecccccccccccccccceeeeecccceeehHHHHHHHHH
Confidence 666554444333322110 0 011 1224555666666667788888888777766554
Q ss_pred h
Q 003740 433 N 433 (799)
Q Consensus 433 ~ 433 (799)
+
T Consensus 213 ~ 213 (230)
T PF00122_consen 213 R 213 (230)
T ss_dssp H
T ss_pred H
Confidence 3
No 197
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=59.54 E-value=18 Score=36.09 Aligned_cols=50 Identities=22% Similarity=0.361 Sum_probs=42.3
Q ss_pred eeeeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHH---HcCCc
Q 003740 651 CIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAR---ECGIL 700 (799)
Q Consensus 651 ~lg~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~---~~GI~ 700 (799)
+-|.+.++|..-|++.+|++.|+.++++|+.+|.-..+.-+.+.+ +||+.
T Consensus 14 lSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~ 66 (262)
T KOG3040|consen 14 LSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFD 66 (262)
T ss_pred ccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCC
Confidence 468999999999999999999999999999999877766666654 56764
No 198
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=55.89 E-value=51 Score=33.93 Aligned_cols=48 Identities=19% Similarity=0.275 Sum_probs=33.9
Q ss_pred eeecccCCCcccHHHHHHHHHhCCCEEEEEc---CCCHHHHHH-HHHHcCCc
Q 003740 653 GIVGIKDPMRPGVKESVAICRSAGITVRMVT---GDNINTAKA-IARECGIL 700 (799)
Q Consensus 653 g~~~~~D~~R~~v~~aI~~l~~aGI~v~mlT---GD~~~tA~a-iA~~~GI~ 700 (799)
|++.-.+.+=|++.++|+.+++.|++++++| |........ +.+..|+.
T Consensus 7 GvL~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~ 58 (236)
T TIGR01460 7 GVLWLGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVD 58 (236)
T ss_pred CccCcCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCC
Confidence 3444456667799999999999999999999 555544433 33336764
No 199
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=55.09 E-value=36 Score=33.21 Aligned_cols=41 Identities=17% Similarity=0.266 Sum_probs=32.0
Q ss_pred CCcccHHHHHHHHHhCCCEEEEEc-CCCHHHHHHHHHHcCCc
Q 003740 660 PMRPGVKESVAICRSAGITVRMVT-GDNINTAKAIARECGIL 700 (799)
Q Consensus 660 ~~R~~v~~aI~~l~~aGI~v~mlT-GD~~~tA~aiA~~~GI~ 700 (799)
.+-|+++++++.|+..|+++.+.| -|.+.-|+.+=+.++|.
T Consensus 45 ~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~ 86 (169)
T PF12689_consen 45 SLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEID 86 (169)
T ss_dssp ---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C
T ss_pred EeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCC
Confidence 346999999999999999999999 58899999999999997
No 200
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=51.08 E-value=1e+02 Score=32.43 Aligned_cols=132 Identities=18% Similarity=0.226 Sum_probs=84.1
Q ss_pred eeeeeecccCCCcccHHHHHHHHHhC-CCEEEEEcCCCHHHHHHHHHHcCC--ccCCceee---cchhhhccCH------
Q 003740 650 TCIGIVGIKDPMRPGVKESVAICRSA-GITVRMVTGDNINTAKAIARECGI--LTDNGIAI---EGPEFREKSD------ 717 (799)
Q Consensus 650 ~~lg~~~~~D~~R~~v~~aI~~l~~a-GI~v~mlTGD~~~tA~aiA~~~GI--~~~~~~~~---~g~~~~~~~~------ 717 (799)
+-+..--...++=++..+.++.|... ...|+|+||-...-......--|| ..+++..+ .|.......+
T Consensus 30 ~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i~l~aehGa~~r~~~g~~~~~~~~~~~~~~ 109 (266)
T COG1877 30 TEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGIGLIAEHGAEVRDPNGKWWINLAEEADLRW 109 (266)
T ss_pred cccccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCccEEEecceEEecCCCCeeEecCHHHHhhH
Confidence 33455566777888999999999988 456999999999988887763333 33333211 2222221111
Q ss_pred ------------------------------------HH-----Hhh------------hcCCceEEEecCcccHHHHHHH
Q 003740 718 ------------------------------------EE-----LSK------------LIPKIQVMARSSPMDKHTLVKH 744 (799)
Q Consensus 718 ------------------------------------~~-----~~~------------~~~~~~v~ar~sP~dK~~lV~~ 744 (799)
++ +.+ ...+..|..|.+-.-|...++.
T Consensus 110 ~~~v~~~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~~~~~~~~~v~~gk~vVEvrp~~~~KG~a~~~ 189 (266)
T COG1877 110 LKEVAAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATLINELKLRVTPGKMVVELRPPGVSKGAAIKY 189 (266)
T ss_pred HHHHHHHHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHHHHhccccccEEEEeCceEEEEeeCCcchHHHHHH
Confidence 00 000 0023336667666779999997
Q ss_pred HHHhCC---CEEEEEcCCccCHHhhhcCC----eeeecCCCCCH
Q 003740 745 LRTTLG---EVVAVTGDGTNDAPALHEAD----IGLAMGIAGTE 781 (799)
Q Consensus 745 Lq~~~G---~vVa~~GDG~NDapAL~~Ad----VGiamgi~gte 781 (799)
+.+..+ ..+...||-.-|-.|++..+ ++|-+|...|+
T Consensus 190 i~~~~~~~~~~~~~aGDD~TDE~~F~~v~~~~~~~v~v~~~~t~ 233 (266)
T COG1877 190 IMDELPFDGRFPIFAGDDLTDEDAFAAVNKLDSITVKVGVGSTQ 233 (266)
T ss_pred HHhcCCCCCCcceecCCCCccHHHHHhhccCCCceEEecCCccc
Confidence 766633 35889999999999999887 56666733333
No 201
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=50.42 E-value=17 Score=32.96 Aligned_cols=39 Identities=28% Similarity=0.316 Sum_probs=30.9
Q ss_pred cccHHHHHHHHHhCCCE-EEEEcCCCHHHHHHHHHHcCCc
Q 003740 662 RPGVKESVAICRSAGIT-VRMVTGDNINTAKAIARECGIL 700 (799)
Q Consensus 662 R~~v~~aI~~l~~aGI~-v~mlTGD~~~tA~aiA~~~GI~ 700 (799)
.+.+.+.+++|.+.|++ +|+.+|.....+...|++.||-
T Consensus 65 ~~~~~~~v~~~~~~g~~~v~~~~g~~~~~~~~~a~~~gi~ 104 (116)
T PF13380_consen 65 PDKVPEIVDEAAALGVKAVWLQPGAESEELIEAAREAGIR 104 (116)
T ss_dssp HHHHHHHHHHHHHHT-SEEEE-TTS--HHHHHHHHHTT-E
T ss_pred HHHHHHHHHHHHHcCCCEEEEEcchHHHHHHHHHHHcCCE
Confidence 55789999999999996 9999999999999999999984
No 202
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=47.29 E-value=22 Score=37.46 Aligned_cols=44 Identities=20% Similarity=0.358 Sum_probs=38.1
Q ss_pred eeecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHH
Q 003740 653 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARE 696 (799)
Q Consensus 653 g~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~ 696 (799)
|++.--..+=|++.++|+.|+++|++++.+|--...+...++.+
T Consensus 17 Gvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~ 60 (269)
T COG0647 17 GVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAAR 60 (269)
T ss_pred CceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHH
Confidence 77778888899999999999999999999999988777755544
No 203
>TIGR00262 trpA tryptophan synthase, alpha subunit. Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. The alpha chain is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. In bacteria and plants each domain is found on a separate subunit (alpha and beta chains), while in fungi the two domains are fused together on a single multifunctional protein. The signature pattern for trpA contains three conserved acidic residues. [LIVM]-E-[LIVM]-G-x(2)-[FYC]-[ST]-[DE]-[PA]-[LIVMY]-[AGLI]-[DE]-G and this is located between residues 43-58 of the model. The Sulfolobus solfataricus trpA is known to be quite divergent from other known trpA sequences.
Probab=45.91 E-value=1.1e+02 Score=32.11 Aligned_cols=96 Identities=20% Similarity=0.256 Sum_probs=56.4
Q ss_pred cCCCcccHHHHHHHHHhCCCEE-EEEcCCC-HHHHHHHHHHcC-CccCCceeecchhhhccCHHHHhhhcCCceEEE-e-
Q 003740 658 KDPMRPGVKESVAICRSAGITV-RMVTGDN-INTAKAIARECG-ILTDNGIAIEGPEFREKSDEELSKLIPKIQVMA-R- 732 (799)
Q Consensus 658 ~D~~R~~v~~aI~~l~~aGI~v-~mlTGD~-~~tA~aiA~~~G-I~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~a-r- 732 (799)
-|-+-++..+.++.|++.|+.. .+++=.. .+..+.+++... .+- +++-.- +-+ +
T Consensus 122 pDlp~ee~~~~~~~~~~~gl~~i~lv~P~T~~eri~~i~~~~~gfiy----~vs~~G-----------------~TG~~~ 180 (256)
T TIGR00262 122 ADLPLEESGDLVEAAKKHGVKPIFLVAPNADDERLKQIAEKSQGFVY----LVSRAG-----------------VTGARN 180 (256)
T ss_pred CCCChHHHHHHHHHHHHCCCcEEEEECCCCCHHHHHHHHHhCCCCEE----EEECCC-----------------CCCCcc
Confidence 3444578889999999999984 4666655 456667777664 321 111000 000 0
Q ss_pred cCcccHHHHHHHHHHhCCCEEEEEcCCcc---CHHhhhc--CCeeeecC
Q 003740 733 SSPMDKHTLVKHLRTTLGEVVAVTGDGTN---DAPALHE--ADIGLAMG 776 (799)
Q Consensus 733 ~sP~dK~~lV~~Lq~~~G~vVa~~GDG~N---DapAL~~--AdVGiamg 776 (799)
..+.+=...|+.+++..+. -.++|=|+| |+..+.+ || |+-+|
T Consensus 181 ~~~~~~~~~i~~lr~~~~~-pi~vgfGI~~~e~~~~~~~~GAD-gvVvG 227 (256)
T TIGR00262 181 RAASALNELVKRLKAYSAK-PVLVGFGISKPEQVKQAIDAGAD-GVIVG 227 (256)
T ss_pred cCChhHHHHHHHHHhhcCC-CEEEeCCCCCHHHHHHHHHcCCC-EEEEC
Confidence 1233345677777765333 356799998 5665554 57 66666
No 204
>PLN02591 tryptophan synthase
Probab=43.46 E-value=1.3e+02 Score=31.38 Aligned_cols=97 Identities=24% Similarity=0.284 Sum_probs=59.8
Q ss_pred ccHHHHHHHHHhCCCE-EEEEcCCC-HHHHHHHHHHc-CCccCCceeecchhhhccCHHHHhhhcCCceEEEe-cCcccH
Q 003740 663 PGVKESVAICRSAGIT-VRMVTGDN-INTAKAIAREC-GILTDNGIAIEGPEFREKSDEELSKLIPKIQVMAR-SSPMDK 738 (799)
Q Consensus 663 ~~v~~aI~~l~~aGI~-v~mlTGD~-~~tA~aiA~~~-GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar-~sP~dK 738 (799)
++..+..+.|++.|+. |.++|-.. ....+.||... |.+-- ....|-. - .| ..|.+=
T Consensus 118 ee~~~~~~~~~~~gl~~I~lv~Ptt~~~ri~~ia~~~~gFIY~--Vs~~GvT-----------------G-~~~~~~~~~ 177 (250)
T PLN02591 118 EETEALRAEAAKNGIELVLLTTPTTPTERMKAIAEASEGFVYL--VSSTGVT-----------------G-ARASVSGRV 177 (250)
T ss_pred HHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHhCCCcEEE--eeCCCCc-----------------C-CCcCCchhH
Confidence 7888999999999997 55555555 35677888776 33210 0000000 0 01 226666
Q ss_pred HHHHHHHHHhCCCEEEEEcCCcc---CHHhhhc--CCeeeecCCCCCHHHH
Q 003740 739 HTLVKHLRTTLGEVVAVTGDGTN---DAPALHE--ADIGLAMGIAGTEVEL 784 (799)
Q Consensus 739 ~~lV~~Lq~~~G~vVa~~GDG~N---DapAL~~--AdVGiamgi~gtevak 784 (799)
..+++.+|+. ..+-.++|=|++ |+..+.+ || |+-.| |.+.|
T Consensus 178 ~~~i~~vk~~-~~~Pv~vGFGI~~~e~v~~~~~~GAD-GvIVG---SalVk 223 (250)
T PLN02591 178 ESLLQELKEV-TDKPVAVGFGISKPEHAKQIAGWGAD-GVIVG---SAMVK 223 (250)
T ss_pred HHHHHHHHhc-CCCceEEeCCCCCHHHHHHHHhcCCC-EEEEC---HHHHH
Confidence 7788899886 667777899999 6666555 45 45455 44544
No 205
>PLN02151 trehalose-phosphatase
Probab=42.99 E-value=1.9e+02 Score=31.90 Aligned_cols=47 Identities=17% Similarity=0.158 Sum_probs=34.2
Q ss_pred cceeeeeecccCC--CcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHH
Q 003740 648 GYTCIGIVGIKDP--MRPGVKESVAICRSAGITVRMVTGDNINTAKAIAR 695 (799)
Q Consensus 648 ~~~~lg~~~~~D~--~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~ 695 (799)
|.|++-++---|. +-|+.+++++.|. .+..|.++||.+......+..
T Consensus 106 DGTL~PIv~~P~~A~~~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~~ 154 (354)
T PLN02151 106 DGTLSPIVDDPDRAFMSKKMRNTVRKLA-KCFPTAIVSGRCREKVSSFVK 154 (354)
T ss_pred CccCCCCCCCcccccCCHHHHHHHHHHh-cCCCEEEEECCCHHHHHHHcC
Confidence 4455444322222 5588999999999 567999999999998887754
No 206
>PF03120 DNA_ligase_OB: NAD-dependent DNA ligase OB-fold domain; InterPro: IPR004150 DNA ligases catalyse the crucial step of joining the breaks in duplex DNA during DNA replication, repair and recombination, utilizing either ATP or NAD(+) as a cofactor []. This family is a small domain found after the adenylation domain DNA_ligase_N in NAD+-dependent ligases (IPR001679 from INTERPRO). OB-fold domains generally are involved in nucleic acid binding.; GO: 0003911 DNA ligase (NAD+) activity, 0006260 DNA replication, 0006281 DNA repair; PDB: 2OWO_A 1TAE_A 3UQ8_A 1DGS_A 1V9P_B 3SGI_A.
Probab=41.99 E-value=12 Score=31.64 Aligned_cols=20 Identities=35% Similarity=0.521 Sum_probs=15.5
Q ss_pred cCCCCcccEEEe-cCCCeecc
Q 003740 253 IYDLLPGDIVHL-CMGDQVPA 272 (799)
Q Consensus 253 ~~~LvvGDiv~l-~~Gd~vPa 272 (799)
-.+|.+||.|.+ +.||.||-
T Consensus 47 ~~~i~~Gd~V~V~raGdVIP~ 67 (82)
T PF03120_consen 47 ELDIRIGDTVLVTRAGDVIPK 67 (82)
T ss_dssp HTT-BBT-EEEEEEETTTEEE
T ss_pred HcCCCCCCEEEEEECCCccce
Confidence 368999999998 79999994
No 207
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=40.61 E-value=1.4e+02 Score=31.17 Aligned_cols=121 Identities=10% Similarity=0.075 Sum_probs=62.6
Q ss_pred cccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcC-CceEEEecCcccHHH
Q 003740 662 RPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIP-KIQVMARSSPMDKHT 740 (799)
Q Consensus 662 R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~v~ar~sP~dK~~ 740 (799)
-+++.++++.|++.|+...+.|+.............|+.. -+.. +..... +..+++.-+|.-=..
T Consensus 122 y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~g~g~---------~~~~-----i~~~~~~~~~~~gKP~p~~~~~ 187 (257)
T TIGR01458 122 YQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLALDVGP---------FVTA-----LEYATDTKATVVGKPSKTFFLE 187 (257)
T ss_pred HHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCCCchH---------HHHH-----HHHHhCCCceeecCCCHHHHHH
Confidence 4788999999999999999998876543322222222210 0000 000000 111233222221122
Q ss_pred HHHHHHHhCCCEEEEEcCCc-cCHHhhhcCCe-eeecCCCCC--HHH----HHhcCC---ChHhHHHhh
Q 003740 741 LVKHLRTTLGEVVAVTGDGT-NDAPALHEADI-GLAMGIAGT--EVE----LECCCF---NFSSRKTYI 798 (799)
Q Consensus 741 lV~~Lq~~~G~vVa~~GDG~-NDapAL~~AdV-Giamgi~gt--eva----k~aaDi---nf~si~~~i 798 (799)
..+.+.-. .+.++|+||.. +|..+-+.+++ ++.+. .|. ... ...+|. ++..+.+.|
T Consensus 188 ~~~~~~~~-~~~~~~vGD~~~~Di~~a~~~G~~~i~v~-~G~~~~~~~~~~~~~pd~~~~sl~el~~~l 254 (257)
T TIGR01458 188 ALRATGCE-PEEAVMIGDDCRDDVGGAQDCGMRGIQVR-TGKYRPSDEEKINVPPDLTCDSLPHAVDLI 254 (257)
T ss_pred HHHHhCCC-hhhEEEECCCcHHHHHHHHHcCCeEEEEC-CCCCChHHhcccCCCCCEEECCHHHHHHHH
Confidence 22222222 36799999996 89998888887 33333 442 111 122344 677776644
No 208
>PF00389 2-Hacid_dh: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; InterPro: IPR006139 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. The catalytic domain contains a number of conserved charged residues which may play a role in the catalytic mechanism. The NAD-binding domain is described in IPR006140 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 2DLD_A 2G76_B 3DC2_B 1YGY_B 3DDN_A 3KB6_B 3K5P_A 3EVT_A 1WWK_B 1GDH_A ....
Probab=40.30 E-value=1.2e+02 Score=27.79 Aligned_cols=84 Identities=15% Similarity=0.269 Sum_probs=49.6
Q ss_pred ccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCc-
Q 003740 657 IKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP- 735 (799)
Q Consensus 657 ~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP- 735 (799)
+-+++.++..+.+++ |+.|.....-.........+.+.+ ++++..+
T Consensus 3 i~~~~~~~~~~~l~~----~~~v~~~~~~~~~~~~~~l~~~d~-----------------------------ii~~~~~~ 49 (133)
T PF00389_consen 3 ITDPLPDEEIERLEE----GFEVEFCDSPSEEELAERLKDADA-----------------------------IIVGSGTP 49 (133)
T ss_dssp ESSS-SHHHHHHHHH----TSEEEEESSSSHHHHHHHHTTESE-----------------------------EEESTTST
T ss_pred EeccCCHHHHHHHHC----CceEEEeCCCCHHHHHHHhCCCeE-----------------------------EEEcCCCC
Confidence 445666665555554 778888774444433333333333 4455555
Q ss_pred ccHHHHHHHHHHhCCCEEEEEcCCcc--CHHhhhcCCeeeecC
Q 003740 736 MDKHTLVKHLRTTLGEVVAVTGDGTN--DAPALHEADIGLAMG 776 (799)
Q Consensus 736 ~dK~~lV~~Lq~~~G~vVa~~GDG~N--DapAL~~AdVGiamg 776 (799)
-+ ..+++.+.+. +.|...|-|.| |.+++++-+|-++=.
T Consensus 50 ~~-~~~l~~~~~L--k~I~~~~~G~d~id~~~a~~~gI~V~n~ 89 (133)
T PF00389_consen 50 LT-AEVLEAAPNL--KLISTAGAGVDNIDLEAAKERGIPVTNV 89 (133)
T ss_dssp BS-HHHHHHHTT---SEEEESSSSCTTB-HHHHHHTTSEEEE-
T ss_pred cC-HHHHhcccee--EEEEEcccccCcccHHHHhhCeEEEEEe
Confidence 44 4555666433 67888899988 888888888888655
No 209
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=39.25 E-value=93 Score=33.73 Aligned_cols=49 Identities=14% Similarity=0.135 Sum_probs=39.5
Q ss_pred eeecccCCCcccHHHHHHHHHhC----CCEEEEEcCCC---HH-HHHHHHHHcCCcc
Q 003740 653 GIVGIKDPMRPGVKESVAICRSA----GITVRMVTGDN---IN-TAKAIARECGILT 701 (799)
Q Consensus 653 g~~~~~D~~R~~v~~aI~~l~~a----GI~v~mlTGD~---~~-tA~aiA~~~GI~~ 701 (799)
|++.-.+++-|++.++++.|+.. |+++..+|-.. .. .+..+.+++|+.-
T Consensus 9 GvL~~g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~~ 65 (321)
T TIGR01456 9 GVLFRGKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVDV 65 (321)
T ss_pred CceECCccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCCC
Confidence 66677788899999999999998 99999999665 33 3566668888853
No 210
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=39.16 E-value=47 Score=31.88 Aligned_cols=41 Identities=20% Similarity=0.102 Sum_probs=37.4
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCc
Q 003740 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL 700 (799)
Q Consensus 659 D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~ 700 (799)
=.+||++.+.++.|++. +++.+.|.-....|..+.+.++..
T Consensus 57 v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~ 97 (156)
T TIGR02250 57 TKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPD 97 (156)
T ss_pred EEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcC
Confidence 34699999999999955 999999999999999999999875
No 211
>PF15584 Imm44: Immunity protein 44
Probab=37.13 E-value=15 Score=31.37 Aligned_cols=19 Identities=26% Similarity=0.660 Sum_probs=15.5
Q ss_pred cccEEEecCCCeecccEEE
Q 003740 258 PGDIVHLCMGDQVPADGLF 276 (799)
Q Consensus 258 vGDiv~l~~Gd~vPaDg~l 276 (799)
+.+-..|+.|++||||||.
T Consensus 13 ~~~~~~I~SG~~iP~~GIw 31 (94)
T PF15584_consen 13 PSEGGVIKSGQEIPCDGIW 31 (94)
T ss_pred CCCCCEEecCCCcccCCeE
Confidence 3455678899999999986
No 212
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=36.59 E-value=17 Score=35.65 Aligned_cols=13 Identities=38% Similarity=0.450 Sum_probs=12.1
Q ss_pred EeecCCCccccCc
Q 003740 453 ICSDKTGTLTTNH 465 (799)
Q Consensus 453 I~~DKTGTLT~n~ 465 (799)
+|||.+||||.+.
T Consensus 1 v~fD~DGTL~~~~ 13 (192)
T PF12710_consen 1 VIFDFDGTLTDSD 13 (192)
T ss_dssp EEEESBTTTBSSH
T ss_pred eEEecCcCeecCC
Confidence 6999999999987
No 213
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=35.40 E-value=1.7e+02 Score=30.80 Aligned_cols=98 Identities=13% Similarity=0.230 Sum_probs=54.8
Q ss_pred cCCCcccHHHHHHHHHhCCCE-EEEEcCCC-HHHHHHHHHHcC-CccC-CceeecchhhhccCHHHHhhhcCCceEEEec
Q 003740 658 KDPMRPGVKESVAICRSAGIT-VRMVTGDN-INTAKAIARECG-ILTD-NGIAIEGPEFREKSDEELSKLIPKIQVMARS 733 (799)
Q Consensus 658 ~D~~R~~v~~aI~~l~~aGI~-v~mlTGD~-~~tA~aiA~~~G-I~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~ 733 (799)
-|-+=++..+.++.|++.|+. +.++|=.. .+.-+.+++.+. .+-- ...-.+|.. ..
T Consensus 126 pDLP~ee~~~~~~~~~~~gi~~I~lv~PtT~~eri~~i~~~a~gFIY~vS~~GvTG~~--------------------~~ 185 (263)
T CHL00200 126 PDLPYEESDYLISVCNLYNIELILLIAPTSSKSRIQKIARAAPGCIYLVSTTGVTGLK--------------------TE 185 (263)
T ss_pred cCCCHHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHhCCCcEEEEcCCCCCCCC--------------------cc
Confidence 333446677777888888876 55666554 456666676664 3210 000011110 12
Q ss_pred CcccHHHHHHHHHHhCCCEEEEEcCCcc---CHHhhhcCCe-eeecC
Q 003740 734 SPMDKHTLVKHLRTTLGEVVAVTGDGTN---DAPALHEADI-GLAMG 776 (799)
Q Consensus 734 sP~dK~~lV~~Lq~~~G~vVa~~GDG~N---DapAL~~AdV-Giamg 776 (799)
.|.+=..+++.+|+. -..-.++|=|+| |+..+..+.. |+-+|
T Consensus 186 ~~~~~~~~i~~ir~~-t~~Pi~vGFGI~~~e~~~~~~~~GADGvVVG 231 (263)
T CHL00200 186 LDKKLKKLIETIKKM-TNKPIILGFGISTSEQIKQIKGWNINGIVIG 231 (263)
T ss_pred ccHHHHHHHHHHHHh-cCCCEEEECCcCCHHHHHHHHhcCCCEEEEC
Confidence 245557788888876 444556799999 4555554422 56566
No 214
>TIGR00216 ispH_lytB (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming). Escherichia coli LytB protein had been found to regulate the activity of RelA (guanosine 3',5'-bispyrophosphate synthetase I), which in turn controls the level of a regulatory metabolite. It is involved in penicillin tolerance and the stringent response.
Probab=35.36 E-value=1.5e+02 Score=31.37 Aligned_cols=141 Identities=15% Similarity=0.203 Sum_probs=89.1
Q ss_pred HHHHHHHHHHHHhccceeeEEEEEcCCCC-----CCCC----------CCCCCcceeeeeecccCCCcccHHHHHHHHHh
Q 003740 610 NHLNETIEKFASEALRTLCLACMEIGNEF-----SADA----------PIPTEGYTCIGIVGIKDPMRPGVKESVAICRS 674 (799)
Q Consensus 610 ~~~~~~~~~~a~~g~r~l~~a~~~~~~~~-----~~~~----------~~~~~~~~~lg~~~~~D~~R~~v~~aI~~l~~ 674 (799)
.+++..+..++++|+.++.+..+.-++-. ..+. ..+. ...-++++.=--..+.+..+.++.|++
T Consensus 100 ~kv~~~v~~~~~~Gy~iiiiG~~~HpEv~gi~g~~~~~~~vv~~~~d~~~l~-~~~~v~vvsQTT~~~~~~~~i~~~l~~ 178 (280)
T TIGR00216 100 TKVHNAVKKYAKEGYHVILIGKKNHPEVIGTRGYAPDKAIVVETLEDLENFK-VEDLLGVVSQTTLSQEDTKEIVAELKA 178 (280)
T ss_pred HHHHHHHHHHHhCCCEEEEEeCCCCCeeeeeccCcCCCEEEECCHHHHHhCC-CCCcEEEEEcCCCcHHHHHHHHHHHHH
Confidence 46788889999999999999876554320 0000 0000 012256666555566777777777777
Q ss_pred CC----C----EEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHHHHHHHHH
Q 003740 675 AG----I----TVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLR 746 (799)
Q Consensus 675 aG----I----~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~lV~~Lq 746 (799)
.. + .+.-.|-+.+..++.+|+++-+.- |.+.-....=.+|++..+
T Consensus 179 ~~~~~~~~~~nTIC~AT~~RQ~a~~~la~~vD~mi---------------------------VVGg~nSsNT~rL~ei~~ 231 (280)
T TIGR00216 179 RVPQKEVPVFNTICYATQNRQDAVKELAPEVDLMI---------------------------VIGGKNSSNTTRLYEIAE 231 (280)
T ss_pred hCCCcCCCCCCCcccccHHHHHHHHHHHhhCCEEE---------------------------EECCCCCchHHHHHHHHH
Confidence 65 1 356678888888888888876642 555555555667777777
Q ss_pred HhCCCEEEEEcCCcc-CHHhhhcC-CeeeecCCCC
Q 003740 747 TTLGEVVAVTGDGTN-DAPALHEA-DIGLAMGIAG 779 (799)
Q Consensus 747 ~~~G~vVa~~GDG~N-DapAL~~A-dVGiamgi~g 779 (799)
+. |..+-.+.+--. |...|+.. .|||.-|-|.
T Consensus 232 ~~-~~~t~~Ie~~~el~~~~l~~~~~VGiTAGAST 265 (280)
T TIGR00216 232 EH-GPPSYLIETAEELPEEWLKGVKVVGITAGAST 265 (280)
T ss_pred Hh-CCCEEEECChHHCCHHHhCCCCEEEEEecCCC
Confidence 77 766666654322 55567755 4799888333
No 215
>cd00860 ThrRS_anticodon ThrRS Threonyl-anticodon binding domain. ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=35.31 E-value=81 Score=26.45 Aligned_cols=47 Identities=19% Similarity=0.191 Sum_probs=38.8
Q ss_pred eecccCCCcccHHHHHHHHHhCCCEEEE-EcCCCHHHHHHHHHHcCCc
Q 003740 654 IVGIKDPMRPGVKESVAICRSAGITVRM-VTGDNINTAKAIARECGIL 700 (799)
Q Consensus 654 ~~~~~D~~R~~v~~aI~~l~~aGI~v~m-lTGD~~~tA~aiA~~~GI~ 700 (799)
++.+.+..++.+.+..+.|++.|++|.+ ..+.+...-..-|.+.|+.
T Consensus 6 ii~~~~~~~~~a~~~~~~Lr~~g~~v~~d~~~~~~~~~~~~a~~~g~~ 53 (91)
T cd00860 6 VIPVTDEHLDYAKEVAKKLSDAGIRVEVDLRNEKLGKKIREAQLQKIP 53 (91)
T ss_pred EEeeCchHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHcCCC
Confidence 4555677888999999999999999988 5777777777888999975
No 216
>cd04724 Tryptophan_synthase_alpha Ttryptophan synthase (TRPS) alpha subunit (TSA). TPRS is a bifunctional tetrameric enzyme (2 alpha and 2 beta subunits) that catalyzes the last two steps of L-tryptophan biosynthesis. Alpha and beta subunit catalyze two distinct reactions which are both strongly stimulated by the formation of the complex. The alpha subunit catalyzes the cleavage of indole 3-glycerol phosphate (IGP) to indole and d-glyceraldehyde 3-phosphate (G3P). Indole is then channeled to the active site of the beta subunit, a PLP-dependent enzyme that catalyzes a replacement reaction to convert L-serine into L-tryptophan.
Probab=34.04 E-value=1.4e+02 Score=30.97 Aligned_cols=96 Identities=21% Similarity=0.322 Sum_probs=57.3
Q ss_pred ccHHHHHHHHHhCCCEEEE-EcCCC-HHHHHHHHH-HcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecC--ccc
Q 003740 663 PGVKESVAICRSAGITVRM-VTGDN-INTAKAIAR-ECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSS--PMD 737 (799)
Q Consensus 663 ~~v~~aI~~l~~aGI~v~m-lTGD~-~~tA~aiA~-~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~s--P~d 737 (799)
++..+.++.|++.|++..+ ++=.. ....+.++. ..|.+- +++-.. +++..+ +.+
T Consensus 116 ee~~~~~~~~~~~g~~~i~~i~P~T~~~~i~~i~~~~~~~vy----~~s~~g-----------------~tG~~~~~~~~ 174 (242)
T cd04724 116 EEAEEFREAAKEYGLDLIFLVAPTTPDERIKKIAELASGFIY----YVSRTG-----------------VTGARTELPDD 174 (242)
T ss_pred HHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHhhCCCCEE----EEeCCC-----------------CCCCccCCChh
Confidence 4788899999999997655 44433 455667776 666541 111000 122111 344
Q ss_pred HHHHHHHHHHhCCCEEEEEcCCcc---CHHhhhc-CCeeeecCCCCCHHHH
Q 003740 738 KHTLVKHLRTTLGEVVAVTGDGTN---DAPALHE-ADIGLAMGIAGTEVEL 784 (799)
Q Consensus 738 K~~lV~~Lq~~~G~vVa~~GDG~N---DapAL~~-AdVGiamgi~gtevak 784 (799)
-...|+.+++. ...-.++|=|+| |+..+.+ || |+.+| |.+.+
T Consensus 175 ~~~~i~~lr~~-~~~pI~vggGI~~~e~~~~~~~~AD-gvVvG---Saiv~ 220 (242)
T cd04724 175 LKELIKRIRKY-TDLPIAVGFGISTPEQAAEVAKYAD-GVIVG---SALVK 220 (242)
T ss_pred HHHHHHHHHhc-CCCcEEEEccCCCHHHHHHHHccCC-EEEEC---HHHHH
Confidence 45777777766 566678899999 4555555 55 56666 44444
No 217
>COG2608 CopZ Copper chaperone [Inorganic ion transport and metabolism]
Probab=33.77 E-value=4 Score=33.52 Aligned_cols=54 Identities=13% Similarity=0.136 Sum_probs=45.3
Q ss_pred ccchhhHHHHHHhhhhhhhhHhHhhhhhhhhhhcccCCCCccccccccccCCcccC
Q 003740 44 NLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQIC 99 (799)
Q Consensus 44 ~~~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 99 (799)
-|....++++....++..+.|++....+.+.|+.. ..+..++.+++..+||.+.
T Consensus 15 ~C~~~V~~al~~v~gv~~v~v~l~~~~~~V~~d~~--~~~~~~i~~ai~~aGy~~~ 68 (71)
T COG2608 15 HCVKTVEKALEEVDGVASVDVDLEKGTATVTFDSN--KVDIEAIIEAIEDAGYKVE 68 (71)
T ss_pred HHHHHHHHHHhcCCCeeEEEEEcccCeEEEEEcCC--cCCHHHHHHHHHHcCCCee
Confidence 45567788889999999999999998899998775 5677888889999999764
No 218
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=33.50 E-value=8.4e+02 Score=31.32 Aligned_cols=41 Identities=17% Similarity=0.205 Sum_probs=29.0
Q ss_pred CCeEEEEecCCCCcccEEEecCCCeecccEEEEeeceeEEec
Q 003740 245 NGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINE 286 (799)
Q Consensus 245 ~g~~~~i~~~~LvvGDiv~l~~Gd~vPaDg~ll~g~~l~vDe 286 (799)
-|....+...|.+|-|...++. ..+=+|=-.+.|++.-|+-
T Consensus 138 pGDIv~L~~Gd~VPAD~rLi~~-~~L~VDES~LTGES~pV~K 178 (1053)
T TIGR01523 138 PGDICLLKTGDTIPADLRLIET-KNFDTDEALLTGESLPVIK 178 (1053)
T ss_pred CCCEEEECCCCEeeccEEEEEe-CceEEEchhhcCCCCceec
Confidence 4677888888999999888874 3456666666677654544
No 219
>PRK04302 triosephosphate isomerase; Provisional
Probab=32.93 E-value=1e+02 Score=31.42 Aligned_cols=99 Identities=17% Similarity=0.226 Sum_probs=54.1
Q ss_pred cccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHHHH
Q 003740 662 RPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTL 741 (799)
Q Consensus 662 R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~l 741 (799)
-.++.+.++.+++.|+.+++++|+. ..+..+ .+.|-. -+.++..... ..-.-....+|++=.++
T Consensus 100 ~~e~~~~v~~a~~~Gl~~I~~v~~~-~~~~~~-~~~~~~---~I~~~p~~~i-----------gt~~~~~~~~~~~i~~~ 163 (223)
T PRK04302 100 LADIEAVVERAKKLGLESVVCVNNP-ETSAAA-AALGPD---YVAVEPPELI-----------GTGIPVSKAKPEVVEDA 163 (223)
T ss_pred HHHHHHHHHHHHHCCCeEEEEcCCH-HHHHHH-hcCCCC---EEEEeCcccc-----------ccCCCCCcCCHHHHHHH
Confidence 3458889999999999999999984 334333 233211 0111000000 00000011356666677
Q ss_pred HHHHHHhCCCEEEEEcCCccCH---HhhhcCCe-eeecC
Q 003740 742 VKHLRTTLGEVVAVTGDGTNDA---PALHEADI-GLAMG 776 (799)
Q Consensus 742 V~~Lq~~~G~vVa~~GDG~NDa---pAL~~AdV-Giamg 776 (799)
++.+++...++..+.|=|+|+. ..+.++++ |+.+|
T Consensus 164 ~~~ir~~~~~~pvi~GggI~~~e~~~~~~~~gadGvlVG 202 (223)
T PRK04302 164 VEAVKKVNPDVKVLCGAGISTGEDVKAALELGADGVLLA 202 (223)
T ss_pred HHHHHhccCCCEEEEECCCCCHHHHHHHHcCCCCEEEEe
Confidence 7777764235566779999654 44444543 67677
No 220
>cd00429 RPE Ribulose-5-phosphate 3-epimerase (RPE). This enzyme catalyses the interconversion of D-ribulose 5-phosphate (Ru5P) into D-xylulose 5-phosphate, as part of the Calvin cycle (reductive pentose phosphate pathway) in chloroplasts and in the oxidative pentose phosphate pathway. In the Calvin cycle Ru5P is phosphorylated by phosphoribulose kinase to ribulose-1,5-bisphosphate, which in turn is used by RubisCO (ribulose-1,5-bisphosphate carboxylase/oxygenase) to incorporate CO2 as the central step in carbohydrate synthesis.
Probab=32.87 E-value=2.1e+02 Score=28.35 Aligned_cols=36 Identities=6% Similarity=0.204 Sum_probs=23.4
Q ss_pred ccHHHHHHHHHhCCCEEEEEcCC--CHHHHHHHHHHcC
Q 003740 663 PGVKESVAICRSAGITVRMVTGD--NINTAKAIARECG 698 (799)
Q Consensus 663 ~~v~~aI~~l~~aGI~v~mlTGD--~~~tA~aiA~~~G 698 (799)
++..+.++.+++.|+.+.+.++. ..+..++++..++
T Consensus 92 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~d 129 (211)
T cd00429 92 DHLHRTIQLIKELGMKAGVALNPGTPVEVLEPYLDEVD 129 (211)
T ss_pred hhHHHHHHHHHHCCCeEEEEecCCCCHHHHHHHHhhCC
Confidence 55667788888888887777653 2445555554433
No 221
>COG3329 Predicted permease [General function prediction only]
Probab=32.42 E-value=2.1e+02 Score=30.46 Aligned_cols=68 Identities=19% Similarity=0.216 Sum_probs=35.2
Q ss_pred CccHHHHHHHHHhcCCCccCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhhcccCCCCCcchhH
Q 003740 137 STSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGL 204 (799)
Q Consensus 137 ~~~~~~~~~r~~~~g~N~~~~~~~~~f~~~~~~~l~~~~~~il~i~a~is~~~~~~~~~~~~~~~d~~ 204 (799)
..++.|....++.|-+-...+...-..|..+-|.|.++.+..++..-++-++.|-..+..-+.+|++.
T Consensus 181 ~g~~~d~~ssr~~~~~~~~~ed~~v~~~ell~Esflnpal~lllggl~iGlitGe~g~~vl~~F~~~l 248 (372)
T COG3329 181 YGDQTDLASSRQEYLSPQWGEDNRVKIWELLQESFLNPALVLLLGGLAIGLITGEQGESVLKPFFDPL 248 (372)
T ss_pred cCchhhhhhhhhhhcccccCcccchhhHHHHHHHHcCchHHHHHHHHHHhheeccCchhhhhhhhHHH
Confidence 33444455444444444444444445677888888888776665544444444322111124556554
No 222
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=32.17 E-value=65 Score=34.22 Aligned_cols=45 Identities=20% Similarity=0.293 Sum_probs=34.9
Q ss_pred ccCCCcccHHHHHHHHHhCCCE---EEEEcCCCHHHHH------HHHHHcCCcc
Q 003740 657 IKDPMRPGVKESVAICRSAGIT---VRMVTGDNINTAK------AIARECGILT 701 (799)
Q Consensus 657 ~~D~~R~~v~~aI~~l~~aGI~---v~mlTGD~~~tA~------aiA~~~GI~~ 701 (799)
+...++.+.++-++.|++.|++ +.++.||++.... ..|+++||..
T Consensus 10 iA~~i~~~ik~~i~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~ 63 (284)
T PRK14170 10 LAKEIQEKVTREVAELVKEGKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMKS 63 (284)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 4556788999999999988876 6778899877654 4678889864
No 223
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=32.08 E-value=62 Score=34.66 Aligned_cols=45 Identities=24% Similarity=0.344 Sum_probs=34.1
Q ss_pred ccCCCcccHHHHHHHHHhCCCE---EEEEcCCCHHHHHH------HHHHcCCcc
Q 003740 657 IKDPMRPGVKESVAICRSAGIT---VRMVTGDNINTAKA------IARECGILT 701 (799)
Q Consensus 657 ~~D~~R~~v~~aI~~l~~aGI~---v~mlTGD~~~tA~a------iA~~~GI~~ 701 (799)
+.+.++.+.++.|+.+++.|++ ..++-||++....+ .|+++||..
T Consensus 12 iA~~i~~~lk~~i~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~ 65 (301)
T PRK14194 12 AAARVLAQVREDVRTLKAAGIEPALAVILVGNDPASQVYVRNKILRAEEAGIRS 65 (301)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEE
Confidence 5567888999999999888876 46677888766543 577889864
No 224
>PF01455 HupF_HypC: HupF/HypC family; InterPro: IPR001109 The large subunit of [NiFe]-hydrogenase, as well as other nickel metalloenzymes, is synthesised as a precursor devoid of the metalloenzyme active site. This precursor then undergoes a complex post-translational maturation process that requires a number of accessory proteins. The hydrogenase expression/formation proteins (HupF/HypC) form a family of small proteins that are hydrogenase precursor-specific chaperones required for this maturation process []. They are believed to keep the hydrogenase precursor in a conformation accessible for metal incorporation [, ].; PDB: 3D3R_A 2Z1C_C 2OT2_A.
Probab=31.71 E-value=1e+02 Score=25.05 Aligned_cols=33 Identities=30% Similarity=0.319 Sum_probs=24.6
Q ss_pred CceeEEEeCCeEEEEec---CCCCcccEEEecCCCe
Q 003740 237 KITVQVARNGFRRKISI---YDLLPGDIVHLCMGDQ 269 (799)
Q Consensus 237 ~~~v~V~R~g~~~~i~~---~~LvvGDiv~l~~Gd~ 269 (799)
...+.|-.+|..++|+. .++.|||-|.+..|--
T Consensus 16 ~~~A~v~~~G~~~~V~~~lv~~v~~Gd~VLVHaG~A 51 (68)
T PF01455_consen 16 GGMAVVDFGGVRREVSLALVPDVKVGDYVLVHAGFA 51 (68)
T ss_dssp TTEEEEEETTEEEEEEGTTCTSB-TT-EEEEETTEE
T ss_pred CCEEEEEcCCcEEEEEEEEeCCCCCCCEEEEecChh
Confidence 44677778999999974 5688999999999843
No 225
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=31.45 E-value=99 Score=32.08 Aligned_cols=46 Identities=17% Similarity=0.237 Sum_probs=32.8
Q ss_pred CCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCc
Q 003740 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG 704 (799)
Q Consensus 659 D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~ 704 (799)
-.+|+|+.+.++.|++.+|.+.+.|+-=-.....+=++-|...++-
T Consensus 89 i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv 134 (246)
T PF05822_consen 89 IMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNV 134 (246)
T ss_dssp --B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTE
T ss_pred hhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCe
Confidence 4579999999999999999999999877777777777778776553
No 226
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=30.88 E-value=1e+03 Score=28.76 Aligned_cols=88 Identities=19% Similarity=0.273 Sum_probs=50.6
Q ss_pred CCHHHHHHHHHHHHHHHHhccceeeEEEEEcCCCCCCCCCCCCCcceeeeeecccCCCcccHH-HHHHHHHhCCCEEEEE
Q 003740 604 LNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVK-ESVAICRSAGITVRMV 682 (799)
Q Consensus 604 l~~~~~~~~~~~~~~~a~~g~r~l~~a~~~~~~~~~~~~~~~~~~~~~lg~~~~~D~~R~~v~-~aI~~l~~aGI~v~ml 682 (799)
+.+.-|....+.++.+.+.|.|++.+. .+.......+. .-+|+-.+.-.+.|+=| +.|+.+|+.| +++..
T Consensus 438 l~Dp~R~~a~e~I~~Lr~~GI~vvMiT-----GDn~~TA~aIA---~elGI~~v~A~~~PedK~~iV~~lQ~~G-~~VaM 508 (673)
T PRK14010 438 LKDVIKDGLVERFRELREMGIETVMCT-----GDNELTAATIA---KEAGVDRFVAECKPEDKINVIREEQAKG-HIVAM 508 (673)
T ss_pred eecCCcHHHHHHHHHHHHCCCeEEEEC-----CCCHHHHHHHH---HHcCCceEEcCCCHHHHHHHHHHHHhCC-CEEEE
Confidence 344456667778888888888887653 11000000000 01333333344555444 5778888887 46677
Q ss_pred cCCCHHHHHHHHH-HcCCc
Q 003740 683 TGDNINTAKAIAR-ECGIL 700 (799)
Q Consensus 683 TGD~~~tA~aiA~-~~GI~ 700 (799)
|||-.+=|-++++ .+||.
T Consensus 509 tGDGvNDAPALa~ADVGIA 527 (673)
T PRK14010 509 TGDGTNDAPALAEANVGLA 527 (673)
T ss_pred ECCChhhHHHHHhCCEEEE
Confidence 8998888887765 35554
No 227
>TIGR00612 ispG_gcpE 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase. Chlamydial members of the family have a long insert. The family is largely restricted to Bacteria, where it is widely but not universally distributed. No homology can be detected between the GcpE family and other proteins.
Probab=30.66 E-value=1.6e+02 Score=31.86 Aligned_cols=93 Identities=26% Similarity=0.353 Sum_probs=61.9
Q ss_pred HHHHHHHHHhCCC--EEEE-EcCCCHH---HHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccH
Q 003740 665 VKESVAICRSAGI--TVRM-VTGDNIN---TAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (799)
Q Consensus 665 v~~aI~~l~~aGI--~v~m-lTGD~~~---tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK 738 (799)
..-.|-.|-..|| ++++ +|+|..+ .|..|=+.+|+-...-.++.-+ -++|+. -|=
T Consensus 212 Saigig~LL~~GIGDTIRVSLT~dP~~EV~va~~IL~slglr~~g~~iiSCP------------------tCGR~~-~dl 272 (346)
T TIGR00612 212 SSAGIGILLARGIGDTIRVSLTDDPTHEVPVAFEILQSLGLRARGVEIVACP------------------SCGRTG-FDV 272 (346)
T ss_pred HHHHHHHHHhhCCCCeEEEECCCCcHHHHHHHHHHHHHcCCCcCCCeEEECC------------------CCCCcC-CCH
Confidence 3445667777777 3433 7888754 5677888899865433333333 234443 444
Q ss_pred HHHHHHHHHh-----CCCEEEEEcCCccCHHhhhcCCeeeecC
Q 003740 739 HTLVKHLRTT-----LGEVVAVTGDGTNDAPALHEADIGLAMG 776 (799)
Q Consensus 739 ~~lV~~Lq~~-----~G~vVa~~GDG~NDapAL~~AdVGiamg 776 (799)
..+++.+.++ ..-.||+.|==+|--.--+.||+|||-|
T Consensus 273 ~~~~~~ve~~l~~~~~~l~VAVMGCvVNGPGEak~ADiGIagg 315 (346)
T TIGR00612 273 EKVVRRVQEALFHLKTPLKVAVMGCVVNGPGEAKHADIGISGG 315 (346)
T ss_pred HHHHHHHHHHHhcCCCCCEEEEECceecCCchhhccCeeeecC
Confidence 4555544443 2468999999999999999999999987
No 228
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=30.61 E-value=4.4e+02 Score=24.42 Aligned_cols=105 Identities=19% Similarity=0.190 Sum_probs=69.0
Q ss_pred eeeeeecccCCCcccHHHHHHHHHhCCCEEEEEcCCC-HHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCce
Q 003740 650 TCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDN-INTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQ 728 (799)
Q Consensus 650 ~~lg~~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~-~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 728 (799)
.++|.++. |-=-.+..=+-..|+.+|++|+-+-+|. ++...+.|.+-+-. +.
T Consensus 5 v~~a~~g~-D~Hd~g~~iv~~~l~~~GfeVi~lg~~~s~e~~v~aa~e~~ad--------------------------ii 57 (132)
T TIGR00640 5 ILVAKMGQ-DGHDRGAKVIATAYADLGFDVDVGPLFQTPEEIARQAVEADVH--------------------------VV 57 (132)
T ss_pred EEEEeeCC-CccHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHHHcCCC--------------------------EE
Confidence 35666666 6666677777788999999999999985 44555556655532 11
Q ss_pred EEEecC---cccHHHHHHHHHHhCC--CEEEEEc--CCccCHHhhhcCCeeeecCCCCCHHH
Q 003740 729 VMARSS---PMDKHTLVKHLRTTLG--EVVAVTG--DGTNDAPALHEADIGLAMGIAGTEVE 783 (799)
Q Consensus 729 v~ar~s---P~dK~~lV~~Lq~~~G--~vVa~~G--DG~NDapAL~~AdVGiamgi~gteva 783 (799)
+++-+. ++.=..+++.|+++ | .+..++| =...|...|++++|-=..+ .||++.
T Consensus 58 ~iSsl~~~~~~~~~~~~~~L~~~-g~~~i~vivGG~~~~~~~~~l~~~Gvd~~~~-~gt~~~ 117 (132)
T TIGR00640 58 GVSSLAGGHLTLVPALRKELDKL-GRPDILVVVGGVIPPQDFDELKEMGVAEIFG-PGTPIP 117 (132)
T ss_pred EEcCchhhhHHHHHHHHHHHHhc-CCCCCEEEEeCCCChHhHHHHHHCCCCEEEC-CCCCHH
Confidence 333322 33445778888877 5 4566776 3445788999999866566 666653
No 229
>PF12304 BCLP: Beta-casein like protein; InterPro: IPR020977 This entry represents eukaryotic proteins that are typically between 216 to 240 amino acids in length which have two conserved sequence motifs: VLR and TRIY. Beta-casein-like protein is associated with cell morphology and a regulation of growth pattern of tumours. It is found in adenocarcinomas of uterine cervical tissues[].
Probab=30.48 E-value=3.6e+02 Score=26.54 Aligned_cols=90 Identities=18% Similarity=0.276 Sum_probs=45.3
Q ss_pred HHHHHhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcchHHHHHHHHHHHHHHH
Q 003740 330 GKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVV 409 (799)
Q Consensus 330 g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilv 409 (799)
|...+.+...++..++-....|-++-.-+.+++...++..+ +.|+ .......| .+-.+...-+++-
T Consensus 23 G~VLRhv~~~~~av~~eY~vsNiisv~Sgll~I~~GI~AIv--lSrn-----l~~~~L~W-------~Ll~~S~ln~LlS 88 (188)
T PF12304_consen 23 GTVLRHVSNPKDAVTLEYAVSNIISVTSGLLSIICGIVAIV--LSRN-----LRNRPLHW-------TLLVVSLLNALLS 88 (188)
T ss_pred hHHHHhhccccccceehhhHHHHHHHHHHHHHHHHhHHHHh--hhcc-----CCCCcchH-------HHHHHHHHHHHHH
Confidence 44566677766666665554454444444444333333221 1222 11111222 2233344455667
Q ss_pred HHhCCchhHHHHHHHHHHHHHHhh
Q 003740 410 VAVPEGLPLAVTLSLAFAMKKMMN 433 (799)
Q Consensus 410 va~P~~Lplav~l~l~~~~~~l~~ 433 (799)
.+|-.||.+++.++.+..-++++.
T Consensus 89 aAc~vGL~~ai~~Tv~~~Gr~Ll~ 112 (188)
T PF12304_consen 89 AACAVGLLLAISLTVANQGRNLLA 112 (188)
T ss_pred HHHHHHHHHHHHHHHHhCchhHhh
Confidence 777777777777776666555543
No 230
>cd05017 SIS_PGI_PMI_1 The members of this protein family contain the SIS (Sugar ISomerase) domain and have both the phosphoglucose isomerase (PGI) and the phosphomannose isomerase (PMI) functions. These functions catalyze the reversible reactions of glucose 6-phosphate to fructose 6-phosphate, and mannose 6-phosphate to fructose 6-phosphate, respectively at an equal rate. This protein contains two SIS domains. This alignment is based on the first SIS domain.
Probab=29.84 E-value=92 Score=28.10 Aligned_cols=38 Identities=18% Similarity=0.234 Sum_probs=29.6
Q ss_pred CcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCc
Q 003740 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL 700 (799)
Q Consensus 661 ~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~ 700 (799)
--+++.++++.+++.|++++.+|++.. -...|.+-|+.
T Consensus 55 ~t~e~i~~~~~a~~~g~~iI~IT~~~~--l~~~~~~~~~~ 92 (119)
T cd05017 55 NTEETLSAVEQAKERGAKIVAITSGGK--LLEMAREHGVP 92 (119)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHcCCc
Confidence 347899999999999999999999874 33356655653
No 231
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=29.31 E-value=3.7e+02 Score=31.07 Aligned_cols=171 Identities=16% Similarity=0.092 Sum_probs=90.9
Q ss_pred eCCeEEEEecCCCCcccEEEecCCCeecccEEEEeeceeEEecccccCCCCccccCCCCCEEEccceeeeceEEEEEEEE
Q 003740 244 RNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTV 323 (799)
Q Consensus 244 R~g~~~~i~~~~LvvGDiv~l~~Gd~vPaDg~ll~g~~l~vDeS~lTGEs~pv~k~~~~~~v~sGt~v~~G~~~~~V~~v 323 (799)
+-|....+...|.+|-|.+.+.- ..=+|--.+.|++..+.-.. |+. ...+.+++.|+....-...+.-+..
T Consensus 53 ~~GDiv~v~~G~~iP~Dg~vl~g--~~~vdes~LTGEs~pv~k~~--g~~-----v~~gs~~~~G~~~~~v~~~~~~s~~ 123 (499)
T TIGR01494 53 VPGDIVLVKSGEIVPADGVLLSG--SCFVDESNLTGESVPVLKTA--GDA-----VFAGTYVFNGTLIVVVSATGPNTFG 123 (499)
T ss_pred CCCCEEEECCCCEeeeeEEEEEc--cEEEEcccccCCCCCeeecc--CCc-----cccCcEEeccEEEEEEEEeccccHH
Confidence 46888999999999999999866 56667777778774444322 332 1234468888876542222211111
Q ss_pred cccchhHHHHHhhcCCCCC-CChhHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH---HhhhhccCCCccccCCcchHHHH
Q 003740 324 GMRTQWGKLMATLSEGGDD-ETPLQVKL-NGVATIIGKIGLFFAVVTFAVMVQG---LFTRKLQEGTHWTWSGDDALEIL 398 (799)
Q Consensus 324 G~~T~~g~i~~~~~~~~~~-~tplq~~l-~~~a~~~~~~~l~~a~l~~~v~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 398 (799)
..++.++..-.+.... .....+.. ..+......+++++.++.+. .... +.. .+.
T Consensus 124 ---~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~-~~~~~~~~~~-----------------~~~ 182 (499)
T TIGR01494 124 ---GKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIALAVFLFWAI-GLWDPNSIFK-----------------IFL 182 (499)
T ss_pred ---HHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcccccHHH-----------------HHH
Confidence 1233333333332222 22222222 33443333333333333222 2211 110 244
Q ss_pred HHHHHHHHHHHHHhCCchhHHHHHHHHHHHH--HHhhhhhhhcccchh
Q 003740 399 EFFAIAVTIVVVAVPEGLPLAVTLSLAFAMK--KMMNDKALVRHLAAC 444 (799)
Q Consensus 399 ~~~~~av~ilvva~P~~Lplav~l~l~~~~~--~l~~~~ilvr~~~a~ 444 (799)
.++...+...-.+.|.++|++...+.....+ -+.|+...+-.+..+
T Consensus 183 ~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~l~~v 230 (499)
T TIGR01494 183 RALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSLNALEELGKV 230 (499)
T ss_pred HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhhccCC
Confidence 5666677777788888899988888776654 344554444444433
No 232
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=29.09 E-value=65 Score=34.28 Aligned_cols=45 Identities=20% Similarity=0.432 Sum_probs=34.3
Q ss_pred ccCCCcccHHHHHHHHHhCCCE---EEEEcCCCHHHHH------HHHHHcCCcc
Q 003740 657 IKDPMRPGVKESVAICRSAGIT---VRMVTGDNINTAK------AIARECGILT 701 (799)
Q Consensus 657 ~~D~~R~~v~~aI~~l~~aGI~---v~mlTGD~~~tA~------aiA~~~GI~~ 701 (799)
+.+.++.+.++.++.|++.|++ ..++-||++.... ..|+++||..
T Consensus 11 ia~~i~~~~~~~v~~l~~~g~~p~Laii~vg~~~as~~Yv~~k~k~a~~~Gi~~ 64 (286)
T PRK14175 11 IAKDYRQGLQDQVEALKEKGFTPKLSVILVGNDGASQSYVRSKKKAAEKIGMIS 64 (286)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 4567788999999999988876 4666898877654 4578889864
No 233
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=28.91 E-value=73 Score=33.80 Aligned_cols=45 Identities=16% Similarity=0.279 Sum_probs=33.9
Q ss_pred ccCCCcccHHHHHHHHHhCCCE---EEEEcCCCHHHHH------HHHHHcCCcc
Q 003740 657 IKDPMRPGVKESVAICRSAGIT---VRMVTGDNINTAK------AIARECGILT 701 (799)
Q Consensus 657 ~~D~~R~~v~~aI~~l~~aGI~---v~mlTGD~~~tA~------aiA~~~GI~~ 701 (799)
+...++.+.++.++.|++.|++ +.++-||++.... ..|+++||..
T Consensus 9 va~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~ 62 (282)
T PRK14169 9 VSKKILADLKQTVAKLAQQDVTPTLAVVLVGSDPASEVYVRNKQRRAEDIGVRS 62 (282)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEE
Confidence 3456788899999999888876 4677888876654 4678889864
No 234
>TIGR03128 RuMP_HxlA 3-hexulose-6-phosphate synthase. at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin. In these species, the enzyme is viewed as a lyase rather than a synthase and is called D-arabino 3-hexulose 6-phosphate formaldehyde lyase. Note that there is some overlap in specificity with the Escherichia coli enzyme 3-keto-L-gulonate 6-phosphate decarboxylase.
Probab=28.76 E-value=3.2e+02 Score=27.19 Aligned_cols=37 Identities=16% Similarity=0.193 Sum_probs=24.4
Q ss_pred cHHHHHHHHHhCCCEEEE--EcCCCHHHHHHHHHHcCCc
Q 003740 664 GVKESVAICRSAGITVRM--VTGDNINTAKAIARECGIL 700 (799)
Q Consensus 664 ~v~~aI~~l~~aGI~v~m--lTGD~~~tA~aiA~~~GI~ 700 (799)
...+.++.+++.|+++.+ .+-+........+.++|+.
T Consensus 90 ~~~~~i~~~~~~g~~~~~~~~~~~t~~~~~~~~~~~g~d 128 (206)
T TIGR03128 90 TIKGAVKAAKKHGKEVQVDLINVKDKVKRAKELKELGAD 128 (206)
T ss_pred HHHHHHHHHHHcCCEEEEEecCCCChHHHHHHHHHcCCC
Confidence 457899999999998774 4544443444445666764
No 235
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=28.67 E-value=1.3e+03 Score=29.20 Aligned_cols=176 Identities=14% Similarity=0.035 Sum_probs=83.0
Q ss_pred eCCeEEEEecCCCCcccEEEecCCCeecccEEEEeeceeEEecccccCCCCccccCCCCCEEEccceeeeceEEEEEEEE
Q 003740 244 RNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTV 323 (799)
Q Consensus 244 R~g~~~~i~~~~LvvGDiv~l~~Gd~vPaDg~ll~g~~l~vDeS~lTGEs~pv~k~~~~~~v~sGt~v~~G~~~~~V~~v 323 (799)
.-|....+...|.+|.|.+.++ |+..=+|=-.+.|++.-++-. .|+...+ ..|. .+.+|+...-=...+.=|..
T Consensus 185 v~GDiV~l~~Gd~IPaD~~li~-g~~l~VdES~LTGES~pv~K~--~~~~n~v--~~GT-~v~~G~~~~iV~~tG~~T~~ 258 (941)
T TIGR01517 185 VVGDIVSLSTGDVVPADGVFIS-GLSLEIDESSITGESDPIKKG--APKDSFL--LSGT-VVNEGSGRMLVTAVGVNSFG 258 (941)
T ss_pred CCCCEEEECCCCEecccEEEEE-cCcEEEEecccCCCCCccccc--CCCCceE--EeCC-eEEeeEEEEEEEEeCCCcHH
Confidence 3678899999999999999985 445556766677776444332 1322222 2333 46666543322222222322
Q ss_pred cccchhHHHHHhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcchHHHHHHHHH
Q 003740 324 GMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAI 403 (799)
Q Consensus 324 G~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (799)
|.=. +.+....+...-+..+.+..+.+......+++++.++.++.+++..............+ .....+..++..
T Consensus 259 gki~---~~~~~~~~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~al~l 333 (941)
T TIGR01517 259 GKLM---MELRAEGEDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQ--TFLDHFIIAVTI 333 (941)
T ss_pred HHHH---HhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhH--HHHHHHHHHHHH
Confidence 3211 11111112222223333333444443333333333332222222211110000000000 001245666777
Q ss_pred HHHHHHHHhCCchhHHHHHHHHHHHHH
Q 003740 404 AVTIVVVAVPEGLPLAVTLSLAFAMKK 430 (799)
Q Consensus 404 av~ilvva~P~~Lplav~l~l~~~~~~ 430 (799)
.++.+=.+.|.++++++..+.....++
T Consensus 334 lv~~iP~~Lp~~vti~l~~~~~~mak~ 360 (941)
T TIGR01517 334 VVVAVPEGLPLAVTIALAYSMKKMMKD 360 (941)
T ss_pred HHhhCCCchHHHHHHHHHHHHHHHHhC
Confidence 777777788888888888887665543
No 236
>PRK11507 ribosome-associated protein; Provisional
Probab=28.28 E-value=67 Score=26.31 Aligned_cols=26 Identities=19% Similarity=0.233 Sum_probs=21.7
Q ss_pred EEEeCCeEEEEecCCCCcccEEEecC
Q 003740 241 QVARNGFRRKISIYDLLPGDIVHLCM 266 (799)
Q Consensus 241 ~V~R~g~~~~i~~~~LvvGDiv~l~~ 266 (799)
.|..||+...-.-..|.+||+|.+.-
T Consensus 38 ~V~VNGeve~rRgkKl~~GD~V~~~g 63 (70)
T PRK11507 38 QVKVDGAVETRKRCKIVAGQTVSFAG 63 (70)
T ss_pred ceEECCEEecccCCCCCCCCEEEECC
Confidence 45669998888889999999999853
No 237
>PF05240 APOBEC_C: APOBEC-like C-terminal domain; InterPro: IPR007904 This domain is found at the C terminus of the Apolipoprotein B mRNA editing enzyme. Apobec-1 catalyzes C to U editing of apolipoprotein B (apoB) mRNA in the mammalian intestine. C to U RNA editing of mammalian apolipoprotein B (apoB) RNA is a site-specific posttranscriptional modification in which a single cytidine is enzymatically deaminated to uridine, thereby generating a UAA stop codon in the edited mRNA. The function of this domain is currently unknown.; GO: 0008270 zinc ion binding, 0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines; PDB: 2NYT_D.
Probab=27.62 E-value=65 Score=25.05 Aligned_cols=23 Identities=26% Similarity=0.319 Sum_probs=17.5
Q ss_pred ccHHHHHHHHHhCCCEEEEEcCC
Q 003740 663 PGVKESVAICRSAGITVRMVTGD 685 (799)
Q Consensus 663 ~~v~~aI~~l~~aGI~v~mlTGD 685 (799)
|+-++.+..|.++|++|.|.|-+
T Consensus 2 ~~~qegLr~L~~aG~~v~iM~~~ 24 (55)
T PF05240_consen 2 PDYQEGLRRLCQAGAQVSIMTYS 24 (55)
T ss_dssp HHHHHHHHHHHHTT-EEEE--HH
T ss_pred cHHHHHHHHHHHCCCeEEecCcH
Confidence 56789999999999999998864
No 238
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=27.30 E-value=90 Score=33.19 Aligned_cols=45 Identities=18% Similarity=0.361 Sum_probs=32.9
Q ss_pred ccCCCcccHHHHHHHHHhC-CCE---EEEEcCCCHHHH------HHHHHHcCCcc
Q 003740 657 IKDPMRPGVKESVAICRSA-GIT---VRMVTGDNINTA------KAIARECGILT 701 (799)
Q Consensus 657 ~~D~~R~~v~~aI~~l~~a-GI~---v~mlTGD~~~tA------~aiA~~~GI~~ 701 (799)
+...+|.+.++.|+.|++. |++ ..++.||++... ...|+++||..
T Consensus 9 iA~~i~~~l~~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~ 63 (286)
T PRK14184 9 TAATIREELKTEVAALTARHGRAPGLAVILVGEDPASQVYVRNKERACEDAGIVS 63 (286)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCEEEEEEeCCChhHHHHHHHHHHHHHHcCCEE
Confidence 3456788888999999877 775 466788887754 44678889864
No 239
>PRK13747 putative mercury resistance protein; Provisional
Probab=27.08 E-value=49 Score=27.07 Aligned_cols=24 Identities=25% Similarity=0.423 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHHHhCCchhHHHHH
Q 003740 397 ILEFFAIAVTIVVVAVPEGLPLAVTL 422 (799)
Q Consensus 397 ~~~~~~~av~ilvva~P~~Lplav~l 422 (799)
+..++|..++ +.+|||=||+.+++
T Consensus 15 ~~~YlWg~lA--vLTCPCHLpiLa~l 38 (78)
T PRK13747 15 ITGYLWGALA--VLTCPCHLPILAAV 38 (78)
T ss_pred chhhhhHHHH--HhcCcchHHHHHHH
Confidence 4456666544 67899999987765
No 240
>TIGR01163 rpe ribulose-phosphate 3-epimerase. This family consists of Ribulose-phosphate 3-epimerase, also known as pentose-5-phosphate 3-epimerase (PPE). PPE converts D-ribulose 5-phosphate into D-xylulose 5-phosphate in Calvin's reductive pentose phosphate cycle. It has been found in a wide range of bacteria, archebacteria, fungi and plants.
Probab=26.75 E-value=3.4e+02 Score=26.89 Aligned_cols=21 Identities=10% Similarity=0.257 Sum_probs=13.9
Q ss_pred cccHHHHHHHHHhCCCEEEEE
Q 003740 662 RPGVKESVAICRSAGITVRMV 682 (799)
Q Consensus 662 R~~v~~aI~~l~~aGI~v~ml 682 (799)
.++..+.++.+++.|+++.+.
T Consensus 90 ~~~~~~~~~~~~~~g~~~~~~ 110 (210)
T TIGR01163 90 SEHIHRLLQLIKDLGAKAGIV 110 (210)
T ss_pred chhHHHHHHHHHHcCCcEEEE
Confidence 455667777777777765544
No 241
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=26.45 E-value=84 Score=33.40 Aligned_cols=45 Identities=27% Similarity=0.433 Sum_probs=33.0
Q ss_pred ccCCCcccHHHHHHHHHhCCCE---EEEEcCCCHHHH------HHHHHHcCCcc
Q 003740 657 IKDPMRPGVKESVAICRSAGIT---VRMVTGDNINTA------KAIARECGILT 701 (799)
Q Consensus 657 ~~D~~R~~v~~aI~~l~~aGI~---v~mlTGD~~~tA------~aiA~~~GI~~ 701 (799)
+.+.+|.++++-++.|++.|++ ..++-||++... ...|+++||..
T Consensus 11 vA~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~ 64 (284)
T PRK14190 11 VAKEKREQLKEEVVKLKEQGIVPGLAVILVGDDPASHSYVRGKKKAAEKVGIYS 64 (284)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 4566788899999999888875 355568887654 45678889864
No 242
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=26.43 E-value=98 Score=32.84 Aligned_cols=45 Identities=22% Similarity=0.325 Sum_probs=34.1
Q ss_pred ccCCCcccHHHHHHHHHhCCCE---EEEEcCCCHHHH------HHHHHHcCCcc
Q 003740 657 IKDPMRPGVKESVAICRSAGIT---VRMVTGDNINTA------KAIARECGILT 701 (799)
Q Consensus 657 ~~D~~R~~v~~aI~~l~~aGI~---v~mlTGD~~~tA------~aiA~~~GI~~ 701 (799)
+.+.++.+.++.|+.+++.|++ ..++-||++... ...|+++||..
T Consensus 9 iA~~i~~~ik~~v~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~ 62 (282)
T PRK14182 9 IAAKVKGEVATEVRALAARGVQTGLTVVRVGDDPASAIYVRGKRKDCEEVGITS 62 (282)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 4456788899999999888876 567778887755 44678889864
No 243
>PF03129 HGTP_anticodon: Anticodon binding domain; InterPro: IPR004154 tRNA synthetases, or tRNA ligases are involved in protein synthesis. This domain is found in histidyl, glycyl, threonyl and prolyl tRNA synthetases [] it is probably the anticodon binding domain [].; GO: 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding; PDB: 1KOG_B 1EVL_D 1EVK_B 1QF6_A 1FYF_B 2I4O_A 2I4M_A 2I4N_A 2I4L_A 1HC7_D ....
Probab=26.27 E-value=1.3e+02 Score=25.58 Aligned_cols=48 Identities=21% Similarity=0.234 Sum_probs=39.4
Q ss_pred eeecccC---CCcccHHHHHHHHHhCCCEEEEE-cCCCHHHHHHHHHHcCCc
Q 003740 653 GIVGIKD---PMRPGVKESVAICRSAGITVRMV-TGDNINTAKAIARECGIL 700 (799)
Q Consensus 653 g~~~~~D---~~R~~v~~aI~~l~~aGI~v~ml-TGD~~~tA~aiA~~~GI~ 700 (799)
.++.+.+ ...+-+.+..+.|+++|+++.+- ++++......-|...|+.
T Consensus 3 ~Ii~~~~~~~~~~~~a~~l~~~L~~~gi~v~~d~~~~~~~k~~~~a~~~g~p 54 (94)
T PF03129_consen 3 VIIPVGKKDEEIIEYAQELANKLRKAGIRVELDDSDKSLGKQIKYADKLGIP 54 (94)
T ss_dssp EEEESSCSHHHHHHHHHHHHHHHHHTTSEEEEESSSSTHHHHHHHHHHTTES
T ss_pred EEEEeCCCcHHHHHHHHHHHHHHHHCCCEEEEECCCCchhHHHHHHhhcCCe
Confidence 4566666 77788899999999999998887 666777888889999985
No 244
>cd01994 Alpha_ANH_like_IV This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This subfamily of proteins is predicted to bind ATP. This domainhas a strongly conserved motif SGGKD at the N terminus.
Probab=25.78 E-value=3e+02 Score=27.41 Aligned_cols=37 Identities=16% Similarity=0.018 Sum_probs=24.8
Q ss_pred cHHHHHHHHHhCCCEEEEEcC-------------CCHHHHHHHHHHcCCc
Q 003740 664 GVKESVAICRSAGITVRMVTG-------------DNINTAKAIARECGIL 700 (799)
Q Consensus 664 ~v~~aI~~l~~aGI~v~mlTG-------------D~~~tA~aiA~~~GI~ 700 (799)
|..-++..+++.|.+|.-++- .+...++.+|+.+||.
T Consensus 11 DS~~al~~a~~~G~~v~~l~~~~~~~~~~~~~h~~~~e~~~~~A~~lgip 60 (194)
T cd01994 11 DSCYALYRALEEGHEVVALLNLTPEEGSSMMYHTVNHELLELQAEAMGIP 60 (194)
T ss_pred HHHHHHHHHHHcCCEEEEEEEEecCCCCcccccccCHHHHHHHHHHcCCc
Confidence 344456666667776554441 2667889999999985
No 245
>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=25.74 E-value=96 Score=33.20 Aligned_cols=45 Identities=18% Similarity=0.369 Sum_probs=34.0
Q ss_pred ccCCCcccHHHHHHHHHhCCCE---EEEEcCCCHHHH------HHHHHHcCCcc
Q 003740 657 IKDPMRPGVKESVAICRSAGIT---VRMVTGDNINTA------KAIARECGILT 701 (799)
Q Consensus 657 ~~D~~R~~v~~aI~~l~~aGI~---v~mlTGD~~~tA------~aiA~~~GI~~ 701 (799)
+.+.+|.+.++-++.+++.|++ +.++-||++... ...|+++||..
T Consensus 10 vA~~i~~~l~~~v~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~~~~~Gi~~ 63 (297)
T PRK14167 10 VAAQIRDDLTDAIETLEDAGVTPGLATVLMSDDPASETYVSMKQRDCEEVGIEA 63 (297)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 4556788999999999988885 466778887654 44678889864
No 246
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=25.74 E-value=1.2e+02 Score=33.21 Aligned_cols=106 Identities=16% Similarity=0.119 Sum_probs=65.0
Q ss_pred cccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHc-C-------CccCCceeecchh----------hhccCHHHHhhh
Q 003740 662 RPGVKESVAICRSAGITVRMVTGDNINTAKAIAREC-G-------ILTDNGIAIEGPE----------FREKSDEELSKL 723 (799)
Q Consensus 662 R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~-G-------I~~~~~~~~~g~~----------~~~~~~~~~~~~ 723 (799)
-|++.+.++.|+++|+++.++|+-....+..+.+.+ | +..--+.++.+.. |+....+.-...
T Consensus 186 ~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~~v~~~~g~~~ 265 (343)
T TIGR02244 186 DPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFRQVDVETGSLK 265 (343)
T ss_pred chhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEeCCCCCcccCCCCceEEEeCCCCccc
Confidence 469999999999999999999999999999999996 7 4433333433322 222221100000
Q ss_pred ------cCCceEEEecCcccHHHHHHHHHHhCCCEEEEEcCCc-cCHHhhh-cCCe
Q 003740 724 ------IPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGT-NDAPALH-EADI 771 (799)
Q Consensus 724 ------~~~~~v~ar~sP~dK~~lV~~Lq~~~G~vVa~~GDG~-NDapAL~-~AdV 771 (799)
+.+-+|+..=+- ..+-+.+.-. |..|+++||-+ .|.-.-+ .++.
T Consensus 266 ~~~~~~l~~g~vY~gGn~---~~~~~~l~~~-~~~vlYvGD~i~~Di~~~kk~~Gw 317 (343)
T TIGR02244 266 WGEVDGLEPGKVYSGGSL---KQFHELLKWR-GKEVLYFGDHIYGDLLRSKKKRGW 317 (343)
T ss_pred CCccccccCCCeEeCCCH---HHHHHHHCCC-CCcEEEECCcchHHHHhhHHhcCc
Confidence 111224433222 2344444445 89999999975 4776655 4543
No 247
>COG0272 Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair]
Probab=25.73 E-value=1.2e+02 Score=35.87 Aligned_cols=53 Identities=26% Similarity=0.310 Sum_probs=39.7
Q ss_pred CCCcceeeeeecccCCCcccHHHHHHHHHhCCCEE---------EEEcCCCHHHHHHHHHHcCCc
Q 003740 645 PTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITV---------RMVTGDNINTAKAIARECGIL 700 (799)
Q Consensus 645 ~~~~~~~lg~~~~~D~~R~~v~~aI~~l~~aGI~v---------~mlTGD~~~tA~aiA~~~GI~ 700 (799)
+..+.+|+=.=.+.---|.++++.++.| |=+| .++-|++.-.=.+=|++|||.
T Consensus 594 ~l~gkt~V~TGtL~~~sR~eak~~le~l---Gakv~~SVSkktD~vvaG~~aGSKl~kA~eLgv~ 655 (667)
T COG0272 594 PLAGKTFVLTGTLEGMSRDEAKALLEAL---GAKVSGSVSKKTDYVVAGENAGSKLAKAQELGVK 655 (667)
T ss_pred ccCCCEEEEeccCCCCCHHHHHHHHHHc---CCEEeceecccccEEEEcCCCChHHHHHHHcCCe
Confidence 3456666655556667899998888877 4443 588899999988889999984
No 248
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=25.46 E-value=96 Score=32.98 Aligned_cols=45 Identities=11% Similarity=0.262 Sum_probs=32.0
Q ss_pred ccCCCcccHHHHHHHHHhC-CCE---EEEEcCCCHHHHH------HHHHHcCCcc
Q 003740 657 IKDPMRPGVKESVAICRSA-GIT---VRMVTGDNINTAK------AIARECGILT 701 (799)
Q Consensus 657 ~~D~~R~~v~~aI~~l~~a-GI~---v~mlTGD~~~tA~------aiA~~~GI~~ 701 (799)
+.+.++.+.++-++.|++. |++ ..++-||++.... ..|+++||..
T Consensus 9 ~A~~i~~~l~~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~ 63 (285)
T PRK14191 9 LSYKIEKDLKNKIQILTAQTGKRPKLAVILVGKDPASQTYVNMKIKACERVGMDS 63 (285)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 3456788888889998855 665 5666788876553 4577888863
No 249
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=25.33 E-value=1e+02 Score=32.57 Aligned_cols=45 Identities=16% Similarity=0.297 Sum_probs=32.9
Q ss_pred ccCCCcccHHHHHHHHHhCCCE----EEEEcCCCHHHH------HHHHHHcCCcc
Q 003740 657 IKDPMRPGVKESVAICRSAGIT----VRMVTGDNINTA------KAIARECGILT 701 (799)
Q Consensus 657 ~~D~~R~~v~~aI~~l~~aGI~----v~mlTGD~~~tA------~aiA~~~GI~~ 701 (799)
+.+.+|++.++-++.++..|.+ ..++-||++... ...|+++||..
T Consensus 10 iA~~i~~~lk~~i~~l~~~g~~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~ 64 (278)
T PRK14172 10 VALKIKEEIKNFVEERKENGLSIPKIASILVGNDGGSIYYMNNQEKVANSLGIDF 64 (278)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 4456788889999999877742 466788887765 44578889864
No 250
>PRK05581 ribulose-phosphate 3-epimerase; Validated
Probab=25.12 E-value=3.6e+02 Score=27.05 Aligned_cols=36 Identities=14% Similarity=0.240 Sum_probs=24.8
Q ss_pred ccHHHHHHHHHhCCCEEEEEcCCC--HHHHHHHHHHcC
Q 003740 663 PGVKESVAICRSAGITVRMVTGDN--INTAKAIARECG 698 (799)
Q Consensus 663 ~~v~~aI~~l~~aGI~v~mlTGD~--~~tA~aiA~~~G 698 (799)
+...+.++.+++.|+++.+.++.+ .+..+++...+.
T Consensus 96 ~~~~~~~~~~~~~~~~~g~~~~~~t~~e~~~~~~~~~d 133 (220)
T PRK05581 96 EHIHRLLQLIKSAGIKAGLVLNPATPLEPLEDVLDLLD 133 (220)
T ss_pred hhHHHHHHHHHHcCCEEEEEECCCCCHHHHHHHHhhCC
Confidence 556678999999999988877633 555566654444
No 251
>PRK13125 trpA tryptophan synthase subunit alpha; Provisional
Probab=24.92 E-value=3.6e+02 Score=27.81 Aligned_cols=98 Identities=18% Similarity=0.213 Sum_probs=51.6
Q ss_pred ccHHHHHHHHHhCCCEEEEEcCC--CHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHHH
Q 003740 663 PGVKESVAICRSAGITVRMVTGD--NINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHT 740 (799)
Q Consensus 663 ~~v~~aI~~l~~aGI~v~mlTGD--~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~ 740 (799)
++..+.++.+++.|+++.++-.. ..+....+++.+.-. ++++-.. .++..-+.+-..
T Consensus 116 ~~~~~~~~~~~~~Gl~~~~~v~p~T~~e~l~~~~~~~~~~----l~msv~~-----------------~~g~~~~~~~~~ 174 (244)
T PRK13125 116 DDLEKYVEIIKNKGLKPVFFTSPKFPDLLIHRLSKLSPLF----IYYGLRP-----------------ATGVPLPVSVER 174 (244)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHhCCCE----EEEEeCC-----------------CCCCCchHHHHH
Confidence 45677888888888885555444 345556666654321 0000000 111112334444
Q ss_pred HHHHHHHhCCCEEEEEcCCc---cCHHhhhcCCe-eeecCCCCCHHHH
Q 003740 741 LVKHLRTTLGEVVAVTGDGT---NDAPALHEADI-GLAMGIAGTEVEL 784 (799)
Q Consensus 741 lV~~Lq~~~G~vVa~~GDG~---NDapAL~~AdV-Giamgi~gtevak 784 (799)
.++.+++.......++|=|+ +|+..+.+|.+ |+-+| |.+.+
T Consensus 175 ~i~~lr~~~~~~~i~v~gGI~~~e~i~~~~~~gaD~vvvG---Sai~~ 219 (244)
T PRK13125 175 NIKRVRNLVGNKYLVVGFGLDSPEDARDALSAGADGVVVG---TAFIE 219 (244)
T ss_pred HHHHHHHhcCCCCEEEeCCcCCHHHHHHHHHcCCCEEEEC---HHHHH
Confidence 55566554223346789999 47777655543 56556 55544
No 252
>PRK09479 glpX fructose 1,6-bisphosphatase II; Reviewed
Probab=24.82 E-value=1.7e+02 Score=31.33 Aligned_cols=94 Identities=22% Similarity=0.301 Sum_probs=60.8
Q ss_pred ecccCCCcccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHH-cCCccC------Cc--------eeecchhhhccCHHH
Q 003740 655 VGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARE-CGILTD------NG--------IAIEGPEFREKSDEE 719 (799)
Q Consensus 655 ~~~~D~~R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~-~GI~~~------~~--------~~~~g~~~~~~~~~~ 719 (799)
+.+-|.+|. .+.|+++|++|.+|+++|--....|.+.+.. .|+.-- .+ .++.|+
T Consensus 161 V~vLdRpRH--~~lI~eiR~~Gari~Li~DGDVa~ai~~~~~~s~vD~~~GiGGaPEGVlaAaAlkclGG~--------- 229 (319)
T PRK09479 161 VVVLDRPRH--EELIAEIREAGARVKLISDGDVAGAIATAFPDTGVDILMGIGGAPEGVLAAAALKCLGGE--------- 229 (319)
T ss_pred EEEEcCchH--HHHHHHHHHcCCeEEEeccccHHHHHHHhcCCCCeeEEEEcCcChHHHHHHHHHHhcCce---------
Confidence 446676665 5899999999999999998777777777622 333210 00 222333
Q ss_pred HhhhcCCceEEEecCcccHHHHHHHHHHhC--------------CCEEEEEcCCccCHHhhhc
Q 003740 720 LSKLIPKIQVMARSSPMDKHTLVKHLRTTL--------------GEVVAVTGDGTNDAPALHE 768 (799)
Q Consensus 720 ~~~~~~~~~v~ar~sP~dK~~lV~~Lq~~~--------------G~vVa~~GDG~NDapAL~~ 768 (799)
..+|.-|.+..+.-++.+.-. |+-|.++.-|+.|...|+-
T Consensus 230 ---------mqgRL~~~~~~e~~r~~~~Gi~D~~kv~~~~dLv~gddv~F~ATGVTdG~lL~G 283 (319)
T PRK09479 230 ---------MQGRLLPRNEEERARAKKMGITDLDKVLTLDDLVRGDDVIFAATGVTDGDLLKG 283 (319)
T ss_pred ---------eEEeECCCCHHHHHHHHHcCCcChhheeEHHHcccCCCEEEEEeCCCCCCCcCC
Confidence 667777766555444332110 3478899999999888874
No 253
>cd00859 HisRS_anticodon HisRS Histidyl-anticodon binding domain. HisRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=24.55 E-value=1.4e+02 Score=24.59 Aligned_cols=47 Identities=19% Similarity=0.211 Sum_probs=37.1
Q ss_pred eecccCCCcccHHHHHHHHHhCCCEEEEEc-CCCHHHHHHHHHHcCCc
Q 003740 654 IVGIKDPMRPGVKESVAICRSAGITVRMVT-GDNINTAKAIARECGIL 700 (799)
Q Consensus 654 ~~~~~D~~R~~v~~aI~~l~~aGI~v~mlT-GD~~~tA~aiA~~~GI~ 700 (799)
++.+.++.++.+.+..+.|+++|++|.+.. +.+......-|...|+.
T Consensus 6 i~~~~~~~~~~a~~i~~~Lr~~g~~v~~~~~~~~~~~~~~~a~~~~~~ 53 (91)
T cd00859 6 VVPLGEGALSEALELAEQLRDAGIKAEIDYGGRKLKKQFKYADRSGAR 53 (91)
T ss_pred EEEcChHHHHHHHHHHHHHHHCCCEEEEecCCCCHHHHHHHHHHcCCC
Confidence 445667778889999999999999998854 44777788888888873
No 254
>PRK01045 ispH 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed
Probab=24.48 E-value=2.7e+02 Score=29.85 Aligned_cols=142 Identities=11% Similarity=0.161 Sum_probs=82.8
Q ss_pred HHHHHHHHHHHHhccceeeEEEEEcCCCC-----CCC-----------CCCCCCcceeeeeecccCCCcccHHHHHHHHH
Q 003740 610 NHLNETIEKFASEALRTLCLACMEIGNEF-----SAD-----------APIPTEGYTCIGIVGIKDPMRPGVKESVAICR 673 (799)
Q Consensus 610 ~~~~~~~~~~a~~g~r~l~~a~~~~~~~~-----~~~-----------~~~~~~~~~~lg~~~~~D~~R~~v~~aI~~l~ 673 (799)
.+++..+..+.++|+.++.+..+.-++-. ... ......+..-++++.=--..+.+..+.++.|+
T Consensus 100 ~k~~~~v~~~~~~Gy~vvi~G~~~HpEv~gi~g~~~~~~~vv~~~~e~~~l~~~~~~~v~vvsQTT~~~~~~~~i~~~l~ 179 (298)
T PRK01045 100 TKVHKEVARMSREGYEIILIGHKGHPEVEGTMGQAPGGVYLVESPEDVAKLEVKDPDKLALVTQTTLSVDDTAEIIAALK 179 (298)
T ss_pred hHHHHHHHHHHhCCCEEEEEeCCCCCeeeeeccCcCCCEEEEcCHHHHhhcccCCCCcEEEEEcCCCcHHHHHHHHHHHH
Confidence 45788889999999999999865544320 000 00000111234555544445566666666666
Q ss_pred hCCCE--------EEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHHHHHHHH
Q 003740 674 SAGIT--------VRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHL 745 (799)
Q Consensus 674 ~aGI~--------v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~lV~~L 745 (799)
+..-. +...|-+.+..++.+|+++-..- |.+.-....=.+|.+..
T Consensus 180 ~~~~~~~v~~~nTIC~aT~~RQ~a~~~La~~vD~mi---------------------------VVGg~~SsNT~kL~~i~ 232 (298)
T PRK01045 180 ERFPEIQGPPKDDICYATQNRQEAVKELAPQADLVI---------------------------VVGSKNSSNSNRLREVA 232 (298)
T ss_pred HhCcCcccCCCCCcchhhHHHHHHHHHHHhhCCEEE---------------------------EECCCCCccHHHHHHHH
Confidence 55322 34466677777777777666542 55555555556677777
Q ss_pred HHhCCCEEEEEcCC-ccCHHhhhc-CCeeeecCCCCC
Q 003740 746 RTTLGEVVAVTGDG-TNDAPALHE-ADIGLAMGIAGT 780 (799)
Q Consensus 746 q~~~G~vVa~~GDG-~NDapAL~~-AdVGiamgi~gt 780 (799)
++. |..+-.+.+- --|...|+. -.|||.-| .+|
T Consensus 233 ~~~-~~~t~~Ie~~~el~~~~l~~~~~VGitaG-AST 267 (298)
T PRK01045 233 EEA-GAPAYLIDDASEIDPEWFKGVKTVGVTAG-ASA 267 (298)
T ss_pred HHH-CCCEEEECChHHCcHHHhcCCCEEEEEec-CCC
Confidence 777 7656665442 224445653 46899988 444
No 255
>smart00306 HintN Hint (Hedgehog/Intein) domain N-terminal region. Hedgehog/Intein domain, N-terminal region. Domain has been split to accommodate large insertions of endonucleases.
Probab=24.32 E-value=88 Score=26.74 Aligned_cols=29 Identities=24% Similarity=0.189 Sum_probs=22.2
Q ss_pred CceeEEEeCCeEEEEecCCCCcccEEEec
Q 003740 237 KITVQVARNGFRRKISIYDLLPGDIVHLC 265 (799)
Q Consensus 237 ~~~v~V~R~g~~~~i~~~~LvvGDiv~l~ 265 (799)
+..+.+.++|..+.+.+.+|.+||.|.+.
T Consensus 71 ~H~~~~~~~~~~~w~~a~~l~~gd~v~~~ 99 (100)
T smart00306 71 DHLLLVRDGGKLVWVFASELKPGDYVLVP 99 (100)
T ss_pred CCEEEEecCCcEEEEEHHHCCCCCEEEec
Confidence 34555566777778999999999999864
No 256
>PRK13111 trpA tryptophan synthase subunit alpha; Provisional
Probab=24.13 E-value=4.1e+02 Score=27.87 Aligned_cols=93 Identities=22% Similarity=0.317 Sum_probs=53.8
Q ss_pred cccHHHHHHHHHhCCCEEEE-EcCCC-HHHHHHHHHHcC-CccC-CceeecchhhhccCHHHHhhhcCCceEEEecCccc
Q 003740 662 RPGVKESVAICRSAGITVRM-VTGDN-INTAKAIARECG-ILTD-NGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (799)
Q Consensus 662 R~~v~~aI~~l~~aGI~v~m-lTGD~-~~tA~aiA~~~G-I~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~d 737 (799)
-++..+.++.|++.|+..+. +|-.. .+..+.+++... .+-- ...-.+|. ....|.+
T Consensus 128 ~ee~~~~~~~~~~~gl~~I~lvap~t~~eri~~i~~~s~gfIY~vs~~GvTG~--------------------~~~~~~~ 187 (258)
T PRK13111 128 PEEAEELRAAAKKHGLDLIFLVAPTTTDERLKKIASHASGFVYYVSRAGVTGA--------------------RSADAAD 187 (258)
T ss_pred HHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHhCCCcEEEEeCCCCCCc--------------------ccCCCcc
Confidence 36777888888888886444 66666 456666766652 2100 00000111 1123455
Q ss_pred HHHHHHHHHHhCCCEEEEEcCCcc---CHHhhhc-CCeeeecC
Q 003740 738 KHTLVKHLRTTLGEVVAVTGDGTN---DAPALHE-ADIGLAMG 776 (799)
Q Consensus 738 K~~lV~~Lq~~~G~vVa~~GDG~N---DapAL~~-AdVGiamg 776 (799)
=...++.+++. ..+-.++|=|++ |+..+.. || |+.+|
T Consensus 188 ~~~~i~~vk~~-~~~pv~vGfGI~~~e~v~~~~~~AD-GviVG 228 (258)
T PRK13111 188 LAELVARLKAH-TDLPVAVGFGISTPEQAAAIAAVAD-GVIVG 228 (258)
T ss_pred HHHHHHHHHhc-CCCcEEEEcccCCHHHHHHHHHhCC-EEEEc
Confidence 56788888886 556667899995 4554444 54 56556
No 257
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=24.01 E-value=1.1e+02 Score=32.74 Aligned_cols=45 Identities=16% Similarity=0.321 Sum_probs=33.1
Q ss_pred ccCCCcccHHHHHHHHHhC-CCE---EEEEcCCCHHHH------HHHHHHcCCcc
Q 003740 657 IKDPMRPGVKESVAICRSA-GIT---VRMVTGDNINTA------KAIARECGILT 701 (799)
Q Consensus 657 ~~D~~R~~v~~aI~~l~~a-GI~---v~mlTGD~~~tA------~aiA~~~GI~~ 701 (799)
+.++++.+.++-|+.+++. |++ +.++.||++... ...|+++||..
T Consensus 9 iA~~i~~~i~~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~ 63 (295)
T PRK14174 9 VSLDLKNELKTRVEAYRAKTGKVPGLTVIIVGEDPASQVYVRNKAKSCKEIGMNS 63 (295)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCCeEEEEEeCCChHHHHHHHHHHHHHHHcCCEE
Confidence 4456788889999999877 665 577888887654 34678888864
No 258
>TIGR03127 RuMP_HxlB 6-phospho 3-hexuloisomerase. Members of this protein family are 6-phospho 3-hexuloisomerase (PHI), or the PHI domain of a fusion protein. This enzyme is part of the ribulose monophosphate (RuMP) pathway, which in one direction removes the toxic metabolite formaldehyde by assimilation into fructose-6-phosphate. In the other direction, in species lacking a complete pentose phosphate pathway, the RuMP pathway yields ribulose-5-phosphate, necessary for nucleotide biosynthesis, at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin.
Probab=23.83 E-value=3.7e+02 Score=26.04 Aligned_cols=102 Identities=17% Similarity=0.067 Sum_probs=63.5
Q ss_pred ccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhc--CCceEEEecCcccH--
Q 003740 663 PGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLI--PKIQVMARSSPMDK-- 738 (799)
Q Consensus 663 ~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~v~ar~sP~dK-- 738 (799)
+...++++.+.+++.-.+.=.|.+...|..++.++--.......+.... ...+ ..+.++.-.+++.|
T Consensus 18 ~~~~~~~~~l~~a~~I~i~G~G~S~~~A~~~~~~l~~~g~~~~~~~~~~---------~~~~~~~Dv~I~iS~sG~t~~~ 88 (179)
T TIGR03127 18 EELDKLADKIIKAKRIFVAGAGRSGLVGKAFAMRLMHLGFNVYVVGETT---------TPSIKKGDLLIAISGSGETESL 88 (179)
T ss_pred HHHHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHHhCCCeEEEeCCcc---------cCCCCCCCEEEEEeCCCCcHHH
Confidence 4577788888888755555578888888888877743322222221110 0111 23335555555555
Q ss_pred HHHHHHHHHhCC-CEEEEEcCCccCHHhhhcCCeeeecC
Q 003740 739 HTLVKHLRTTLG-EVVAVTGDGTNDAPALHEADIGLAMG 776 (799)
Q Consensus 739 ~~lV~~Lq~~~G-~vVa~~GDG~NDapAL~~AdVGiamg 776 (799)
.++++.++++ | .++++|+... .|.-+.||+-+.+.
T Consensus 89 i~~~~~ak~~-g~~ii~IT~~~~--s~la~~ad~~l~~~ 124 (179)
T TIGR03127 89 VTVAKKAKEI-GATVAAITTNPE--STLGKLADVVVEIP 124 (179)
T ss_pred HHHHHHHHHC-CCeEEEEECCCC--CchHHhCCEEEEeC
Confidence 5777888888 7 5666666554 67778999999876
No 259
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=23.52 E-value=3e+02 Score=25.73 Aligned_cols=54 Identities=17% Similarity=0.154 Sum_probs=36.1
Q ss_pred cceeeeeecccCCCcccHHHHHHHHHhCCC--EEEEEcCCC------HHHHHHHHHHcCCcc
Q 003740 648 GYTCIGIVGIKDPMRPGVKESVAICRSAGI--TVRMVTGDN------INTAKAIARECGILT 701 (799)
Q Consensus 648 ~~~~lg~~~~~D~~R~~v~~aI~~l~~aGI--~v~mlTGD~------~~tA~aiA~~~GI~~ 701 (799)
+-.++|+-++-=.--+..++.++.|+++|+ .++|+-|-- ...-..-++++|+..
T Consensus 52 ~adiVglS~l~~~~~~~~~~~~~~l~~~gl~~~~vivGG~~vi~~~d~~~~~~~l~~~Gv~~ 113 (134)
T TIGR01501 52 KADAILVSSLYGHGEIDCKGLRQKCDEAGLEGILLYVGGNLVVGKQDFPDVEKRFKEMGFDR 113 (134)
T ss_pred CCCEEEEecccccCHHHHHHHHHHHHHCCCCCCEEEecCCcCcChhhhHHHHHHHHHcCCCE
Confidence 444566655555666778999999999997 356677732 112245689999754
No 260
>KOG1250 consensus Threonine/serine dehydratases [Amino acid transport and metabolism]
Probab=22.87 E-value=2.1e+02 Score=31.73 Aligned_cols=75 Identities=24% Similarity=0.302 Sum_probs=55.3
Q ss_pred cHHHHHHHHHhCCCE--EEEEcCCCHHHHHH-HHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHHH
Q 003740 664 GVKESVAICRSAGIT--VRMVTGDNINTAKA-IARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHT 740 (799)
Q Consensus 664 ~v~~aI~~l~~aGI~--v~mlTGD~~~tA~a-iA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~ 740 (799)
|+..+++.+-+.+-+ |+-.|+-|..-|.+ -|+++||.. ..|+--++|..|.+
T Consensus 100 Ga~~~~~kla~~~~~~gViasSaGNha~a~Ayaa~~Lgipa-------------------------TIVmP~~tp~~kiq 154 (457)
T KOG1250|consen 100 GAGNALQKLAKQQKKAGVIASSAGNHAQAAAYAARKLGIPA-------------------------TIVMPVATPLMKIQ 154 (457)
T ss_pred hHHHHHHHHHHhhhcCceEEecCccHHHHHHHHHHhcCCce-------------------------EEEecCCChHHHHH
Confidence 788888888777643 77778777665555 579999964 23888889988876
Q ss_pred HHHHHHHhCCCEEEEEcCCccCHHhhh
Q 003740 741 LVKHLRTTLGEVVAVTGDGTNDAPALH 767 (799)
Q Consensus 741 lV~~Lq~~~G~vVa~~GDG~NDapAL~ 767 (799)
-++. . |..|.+.|+-..-|-++.
T Consensus 155 ~~~n---l-GA~Vil~G~~~deAk~~a 177 (457)
T KOG1250|consen 155 RCRN---L-GATVILSGEDWDEAKAFA 177 (457)
T ss_pred HHhc---c-CCEEEEecccHHHHHHHH
Confidence 5554 4 889999999876655543
No 261
>PF13275 S4_2: S4 domain; PDB: 1P9K_A.
Probab=22.80 E-value=51 Score=26.61 Aligned_cols=23 Identities=35% Similarity=0.403 Sum_probs=12.7
Q ss_pred EEeCCeEEEEecCCCCcccEEEe
Q 003740 242 VARNGFRRKISIYDLLPGDIVHL 264 (799)
Q Consensus 242 V~R~g~~~~i~~~~LvvGDiv~l 264 (799)
|..||+...-.-..|.+||+|.+
T Consensus 35 V~VNGe~e~rrg~Kl~~GD~V~~ 57 (65)
T PF13275_consen 35 VKVNGEVETRRGKKLRPGDVVEI 57 (65)
T ss_dssp HEETTB----SS----SSEEEEE
T ss_pred eEECCEEccccCCcCCCCCEEEE
Confidence 45588888888899999999998
No 262
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=22.61 E-value=1.6e+03 Score=28.26 Aligned_cols=197 Identities=19% Similarity=0.166 Sum_probs=99.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhh-----cCceeEE----EeCCeEEEEecCCCCcccEEEecCCCeecccEEEEeece
Q 003740 211 LLVVFVTATSDYKQSLQFKDLDREK-----KKITVQV----ARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFS 281 (799)
Q Consensus 211 llv~~~~~~~~~~~~~~~~~l~~~~-----~~~~v~V----~R~g~~~~i~~~~LvvGDiv~l~~Gd~vPaDg~ll~g~~ 281 (799)
.++.++.-......-.+++++.... +.....+ +.-|....+...|.+|-|...|+.-+ .=+|=-.+.|++
T Consensus 117 ~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~-l~VdEs~LTGES 195 (917)
T COG0474 117 ALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSD-LEVDESALTGES 195 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCccccceEEEEecC-ceEEcccccCCC
Confidence 3444666666666666666554421 2222222 24577888889999999999988776 455555666666
Q ss_pred eEEecccccC--CCCc--cccC----CCCCEEEccceeeeceEEEEEEEEcccchhHHHHHhh-cCCCCCCChhHHHHHH
Q 003740 282 VLINESSLTG--ESEP--VNVN----ALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATL-SEGGDDETPLQVKLNG 352 (799)
Q Consensus 282 l~vDeS~lTG--Es~p--v~k~----~~~~~v~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~-~~~~~~~tplq~~l~~ 352 (799)
.-++-....- |..| ..+. .|. .|.+|+-..--..++.-|..|..+.. +... .....-...+.+....
T Consensus 196 ~pv~K~~~~~~~~~~~~~~d~~n~l~sGt-~V~~G~~~giVvaTG~~T~~G~ia~~---~~~~~~~~t~l~~~l~~~~~~ 271 (917)
T COG0474 196 LPVEKQALPLTKSDAPLGLDRDNMLFSGT-TVVSGRAKGIVVATGFETEFGKIARL---LPTKKEVKTPLQRKLNKLGKF 271 (917)
T ss_pred cchhccccccccccccccCCccceEEeCC-EEEcceEEEEEEEEcCccHHHHHHHh---hccccccCCcHHHHHHHHHHH
Confidence 4333322211 1110 1221 344 47777744433455556666665532 2222 2222222334444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcchHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHH
Q 003740 353 VATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMK 429 (799)
Q Consensus 353 ~a~~~~~~~l~~a~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvva~P~~Lplav~l~l~~~~~ 429 (799)
+..+....++++.++.+...-..+.. .+...+..+++++=.+.|.-+-++..+....-.+
T Consensus 272 l~~~~l~~~~~~~~~~~~~~~~~~~~-----------------~~~~~v~l~va~IPegLp~~vti~la~g~~~mak 331 (917)
T COG0474 272 LLVLALVLGALVFVVGLFRGGNGLLE-----------------SFLTALALAVAAVPEGLPAVVTIALALGAQRMAK 331 (917)
T ss_pred HHHHHHHHHHHHHHHHHHhcCccHHH-----------------HHHHHHHHHHhccccchHHHHHHHHHHHHHHHHh
Confidence 44444444433333333320000000 2345566677777777777777777766555433
No 263
>PRK09140 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; Reviewed
Probab=22.56 E-value=7.1e+02 Score=25.00 Aligned_cols=102 Identities=19% Similarity=0.251 Sum_probs=0.0
Q ss_pred HHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhc---CCceEEEecCcccHHHH
Q 003740 665 VKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLI---PKIQVMARSSPMDKHTL 741 (799)
Q Consensus 665 v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~---~~~~v~ar~sP~dK~~l 741 (799)
..+-++.+.++|-+..+..+++...+.+ ++..|+ .++-| -.+.+|+.+.. .++.-+.-..+-. ...
T Consensus 72 ~~~~~~~a~~aGA~fivsp~~~~~v~~~-~~~~~~-----~~~~G----~~t~~E~~~A~~~Gad~vk~Fpa~~~G-~~~ 140 (206)
T PRK09140 72 SPEQVDRLADAGGRLIVTPNTDPEVIRR-AVALGM-----VVMPG----VATPTEAFAALRAGAQALKLFPASQLG-PAG 140 (206)
T ss_pred CHHHHHHHHHcCCCEEECCCCCHHHHHH-HHHCCC-----cEEcc----cCCHHHHHHHHHcCCCEEEECCCCCCC-HHH
Q ss_pred HHHHHHhCC--CEEEEEcCCcc--CHHhhhcCCe-eeecCCCC
Q 003740 742 VKHLRTTLG--EVVAVTGDGTN--DAPALHEADI-GLAMGIAG 779 (799)
Q Consensus 742 V~~Lq~~~G--~vVa~~GDG~N--DapAL~~AdV-Giamgi~g 779 (799)
++.+++.+. -.+..+| |+| +++.+.+|++ |++++ ++
T Consensus 141 l~~l~~~~~~~ipvvaiG-GI~~~n~~~~~~aGa~~vav~-s~ 181 (206)
T PRK09140 141 IKALRAVLPPDVPVFAVG-GVTPENLAPYLAAGAAGFGLG-SA 181 (206)
T ss_pred HHHHHhhcCCCCeEEEEC-CCCHHHHHHHHHCCCeEEEEe-hH
No 264
>COG0078 ArgF Ornithine carbamoyltransferase [Amino acid transport and metabolism]
Probab=22.38 E-value=3.5e+02 Score=29.00 Aligned_cols=85 Identities=21% Similarity=0.308 Sum_probs=50.8
Q ss_pred cHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHHHHHH
Q 003740 664 GVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVK 743 (799)
Q Consensus 664 ~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~lV~ 743 (799)
|+..++.++ +..+|+=|....+....|+..+++ |++|-.- ..-|-|=+.=+.
T Consensus 91 DTArVLsr~----~D~I~~R~~~~~~ve~lA~~s~VP-----ViNgLtD-------------------~~HP~Q~LADl~ 142 (310)
T COG0078 91 DTARVLSRM----VDAIMIRGFSHETLEELAKYSGVP-----VINGLTD-------------------EFHPCQALADLM 142 (310)
T ss_pred HHHHHHHhh----hheEEEecccHHHHHHHHHhCCCc-----eEccccc-------------------ccCcHHHHHHHH
Confidence 344444443 677899999999999999999986 2222211 113444443333
Q ss_pred HHHHhC----CCEEEEEcCCccCHH--hhhcCCeeeecC
Q 003740 744 HLRTTL----GEVVAVTGDGTNDAP--ALHEADIGLAMG 776 (799)
Q Consensus 744 ~Lq~~~----G~vVa~~GDG~NDap--AL~~AdVGiamg 776 (799)
.+++.+ |.+++++|||.|=+- ++..|=.|+-+-
T Consensus 143 Ti~E~~g~l~g~k~a~vGDgNNv~nSl~~~~a~~G~dv~ 181 (310)
T COG0078 143 TIKEHFGSLKGLKLAYVGDGNNVANSLLLAAAKLGMDVR 181 (310)
T ss_pred HHHHhcCcccCcEEEEEcCcchHHHHHHHHHHHhCCeEE
Confidence 344332 689999999955333 444444444443
No 265
>COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis]
Probab=21.96 E-value=95 Score=27.31 Aligned_cols=28 Identities=29% Similarity=0.421 Sum_probs=22.4
Q ss_pred EEeCCeEEEEecCCCCcccEEEecCCCee
Q 003740 242 VARNGFRRKISIYDLLPGDIVHLCMGDQV 270 (799)
Q Consensus 242 V~R~g~~~~i~~~~LvvGDiv~l~~Gd~v 270 (799)
|.-||... -|+.++++||+|.|.-|...
T Consensus 36 V~vNG~~a-KpS~~VK~GD~l~i~~~~~~ 63 (100)
T COG1188 36 VKVNGQRA-KPSKEVKVGDILTIRFGNKE 63 (100)
T ss_pred EEECCEEc-ccccccCCCCEEEEEeCCcE
Confidence 34478766 78999999999999988653
No 266
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=21.44 E-value=1.6e+02 Score=31.31 Aligned_cols=45 Identities=27% Similarity=0.405 Sum_probs=32.1
Q ss_pred ccCCCcccHHHHHHHHHhC-CCE---EEEEcCCCHHHH------HHHHHHcCCcc
Q 003740 657 IKDPMRPGVKESVAICRSA-GIT---VRMVTGDNINTA------KAIARECGILT 701 (799)
Q Consensus 657 ~~D~~R~~v~~aI~~l~~a-GI~---v~mlTGD~~~tA------~aiA~~~GI~~ 701 (799)
+.+.+|.+.++.++.+++. |++ ..++.||++... ...|+++||..
T Consensus 10 ia~~i~~~lk~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~ 64 (284)
T PRK14179 10 LAQKMQAELAEKVAKLKEEKGIVPGLVVILVGDNPASQVYVRNKERSALAAGFKS 64 (284)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCceEEEEEeCCChhHHHHHHHHHHHHHHcCCEE
Confidence 3456788888899998876 665 457778877654 34678889864
No 267
>cd05013 SIS_RpiR RpiR-like protein. RpiR contains a SIS (Sugar ISomerase) domain, which is found in many phosphosugar isomerases and phosphosugar binding proteins. In E. coli, rpiR negatively regulates the expression of rpiB gene. Both rpiB and rpiA are ribose phosphate isomerases that catalyze the reversible reactions of ribose 5-phosphate into ribulose 5-phosphate.
Probab=21.06 E-value=3.8e+02 Score=24.07 Aligned_cols=107 Identities=16% Similarity=0.172 Sum_probs=60.4
Q ss_pred cHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhc-CCceEEEec--CcccHHH
Q 003740 664 GVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLI-PKIQVMARS--SPMDKHT 740 (799)
Q Consensus 664 ~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~v~ar~--sP~dK~~ 740 (799)
...++++.+.+++.-...-+|-....|...+..+--.......+.+.+... ......- ..+.++.-. .+.+-.+
T Consensus 2 ~i~~~~~~i~~~~~i~i~g~g~s~~~a~~~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~iS~~g~~~~~~~ 78 (139)
T cd05013 2 ALEKAVDLLAKARRIYIFGVGSSGLVAEYLAYKLLRLGKPVVLLSDPHLQL---MSAANLTPGDVVIAISFSGETKETVE 78 (139)
T ss_pred HHHHHHHHHHhCCEEEEEEcCchHHHHHHHHHHHHHcCCceEEecCHHHHH---HHHHcCCCCCEEEEEeCCCCCHHHHH
Confidence 356788888888766777777778888887777654432222222221110 0001111 222222222 2345567
Q ss_pred HHHHHHHhCC-CEEEEEcCCccCHHhhhcCCeeeecC
Q 003740 741 LVKHLRTTLG-EVVAVTGDGTNDAPALHEADIGLAMG 776 (799)
Q Consensus 741 lV~~Lq~~~G-~vVa~~GDG~NDapAL~~AdVGiamg 776 (799)
+++.++++ | .+|++|++.- .|.-+.+|.-|-..
T Consensus 79 ~~~~a~~~-g~~iv~iT~~~~--~~l~~~~d~~i~~~ 112 (139)
T cd05013 79 AAEIAKER-GAKVIAITDSAN--SPLAKLADIVLLVS 112 (139)
T ss_pred HHHHHHHc-CCeEEEEcCCCC--ChhHHhcCEEEEcC
Confidence 88888888 6 4556666544 45557899988775
No 268
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=21.05 E-value=1.4e+02 Score=31.74 Aligned_cols=45 Identities=27% Similarity=0.497 Sum_probs=33.5
Q ss_pred ccCCCcccHHHHHHHHHhCCCE---EEEEcCCCHHHH------HHHHHHcCCcc
Q 003740 657 IKDPMRPGVKESVAICRSAGIT---VRMVTGDNINTA------KAIARECGILT 701 (799)
Q Consensus 657 ~~D~~R~~v~~aI~~l~~aGI~---v~mlTGD~~~tA------~aiA~~~GI~~ 701 (799)
+.+.++.+.++-++.+++.|++ +.++-||++... ...|+++||..
T Consensus 9 ~a~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~ 62 (282)
T PRK14166 9 LSAKIKEELKEKNQFLKSKGIESCLAVILVGDNPASQTYVKSKAKACEECGIKS 62 (282)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 3456788889999999888876 466778887654 44678889863
No 269
>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=21.00 E-value=3.1e+02 Score=28.86 Aligned_cols=62 Identities=23% Similarity=0.368 Sum_probs=34.7
Q ss_pred CEEEEEcCC-CHHHHHHHHH----------HcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHHHHHHHH
Q 003740 677 ITVRMVTGD-NINTAKAIAR----------ECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHL 745 (799)
Q Consensus 677 I~v~mlTGD-~~~tA~aiA~----------~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~lV~~L 745 (799)
.-+.+..|| +.++...+.+ |+|+.. .+-+.+|+.++.-....+. +++++++=+++++.+
T Consensus 19 ~i~yit~GdP~~e~s~e~i~~L~~~GaD~iELGvPf-SDPvADGP~Iq~A~~rAL~---------~g~t~~~~lel~~~~ 88 (265)
T COG0159 19 LIPYVTAGDPDLETSLEIIKTLVEAGADILELGVPF-SDPVADGPTIQAAHLRALA---------AGVTLEDTLELVEEI 88 (265)
T ss_pred eEEEEeCCCCCHHHHHHHHHHHHhCCCCEEEecCCC-CCcCccCHHHHHHHHHHHH---------CCCCHHHHHHHHHHH
Confidence 334455555 4445444444 467753 4567788887655444432 345666666666666
Q ss_pred HHh
Q 003740 746 RTT 748 (799)
Q Consensus 746 q~~ 748 (799)
++.
T Consensus 89 r~~ 91 (265)
T COG0159 89 RAK 91 (265)
T ss_pred Hhc
Confidence 644
No 270
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=20.96 E-value=67 Score=33.13 Aligned_cols=92 Identities=14% Similarity=0.070 Sum_probs=49.0
Q ss_pred cccHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeecchhhhccCHHHHhhhcCCceEEEecCcccHHHH
Q 003740 662 RPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTL 741 (799)
Q Consensus 662 R~~v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~~~~~~~~v~ar~sP~dK~~l 741 (799)
-+++.++++.|++.|++. ++|......+.......|.. .-+. .+...-.+...+. -|.. ..+
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~g---------~~~~-----~i~~~g~~~~~~g--KP~~-~~~ 201 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGAG---------YYAE-----LIKQLGGKVIYSG--KPYP-AIF 201 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEeccc---------HHHH-----HHHHhCCcEecCC--CCCH-HHH
Confidence 489999999999999997 77876655443322222221 0000 0000001111111 2221 122
Q ss_pred HHHHHHhCC----CEEEEEcCC-ccCHHhhhcCCee
Q 003740 742 VKHLRTTLG----EVVAVTGDG-TNDAPALHEADIG 772 (799)
Q Consensus 742 V~~Lq~~~G----~vVa~~GDG-~NDapAL~~AdVG 772 (799)
-..+++. | +.+.|+||. .+|..+=+.|++-
T Consensus 202 ~~~~~~~-~~~~~~~~~~vGD~~~~Di~~a~~~G~~ 236 (242)
T TIGR01459 202 HKALKEC-SNIPKNRMLMVGDSFYTDILGANRLGID 236 (242)
T ss_pred HHHHHHc-CCCCcccEEEECCCcHHHHHHHHHCCCe
Confidence 2222222 3 369999999 5999988888764
No 271
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=20.72 E-value=1.6e+02 Score=26.71 Aligned_cols=55 Identities=16% Similarity=0.195 Sum_probs=40.3
Q ss_pred CcceeeeeecccCCCcccHHHHHHHHHhCCC-E-EEEEcCCCHHHHHHHHHHcCCcc
Q 003740 647 EGYTCIGIVGIKDPMRPGVKESVAICRSAGI-T-VRMVTGDNINTAKAIARECGILT 701 (799)
Q Consensus 647 ~~~~~lg~~~~~D~~R~~v~~aI~~l~~aGI-~-v~mlTGD~~~tA~aiA~~~GI~~ 701 (799)
.+-.++++-.......+.+++.++.|++.|. + .+|+-|..+..-.+-.++.|+..
T Consensus 49 ~~~d~V~iS~~~~~~~~~~~~~~~~L~~~~~~~i~i~~GG~~~~~~~~~~~~~G~d~ 105 (122)
T cd02071 49 EDVDVIGLSSLSGGHMTLFPEVIELLRELGAGDILVVGGGIIPPEDYELLKEMGVAE 105 (122)
T ss_pred cCCCEEEEcccchhhHHHHHHHHHHHHhcCCCCCEEEEECCCCHHHHHHHHHCCCCE
Confidence 3445677777778888999999999999977 4 45666655544456677999864
No 272
>TIGR00381 cdhD CO dehydrogenase/acetyl-CoA synthase, delta subunit. This is the small subunit of a heterodimer which catalyzes the reaction CO + H2O + Acceptor = CO2 + Reduced acceptor and is involved in the synthesis of acetyl-CoA from CO2 and H2.
Probab=20.59 E-value=6e+02 Score=28.22 Aligned_cols=98 Identities=15% Similarity=0.141 Sum_probs=55.0
Q ss_pred cHHHHHHHHHhCCCEEEEEcCCCH----------HHHHHHHHHcCCccCCceeecchhhhccCHHHHh---hhc-CCceE
Q 003740 664 GVKESVAICRSAGITVRMVTGDNI----------NTAKAIARECGILTDNGIAIEGPEFREKSDEELS---KLI-PKIQV 729 (799)
Q Consensus 664 ~v~~aI~~l~~aGI~v~mlTGD~~----------~tA~aiA~~~GI~~~~~~~~~g~~~~~~~~~~~~---~~~-~~~~v 729 (799)
=++..|+.++.-.|.++..|||.. .+++.++..+++. +++.|..-...+.+-+. +.+ .+-.+
T Consensus 144 wak~~V~~~~aD~Ialr~~S~DP~~~d~~~~e~a~~vk~V~~av~vP----LIL~gsg~~~kD~eVLeaaLe~~~G~kpL 219 (389)
T TIGR00381 144 WARKCVKEFGADMVTIHLISTDPKLDDKSPSEAAKVLEDVLQAVDVP----IVIGGSGNPEKDPLVLEKAAEVAEGERCL 219 (389)
T ss_pred HHHHHHHHhCCCEEEEEecCCCccccccCHHHHHHHHHHHHHhCCCC----EEEeCCCCCcCCHHHHHHHHHHhCCCCcE
Confidence 345555677777778888888866 2344444445543 56665532233333222 222 22346
Q ss_pred EEecCcccHHH-HHHHHHHhCCCEEEEEc-CCccCHHhh
Q 003740 730 MARSSPMDKHT-LVKHLRTTLGEVVAVTG-DGTNDAPAL 766 (799)
Q Consensus 730 ~ar~sP~dK~~-lV~~Lq~~~G~vVa~~G-DG~NDapAL 766 (799)
+.-.+.++... +.+..++ ||+.|.+-+ |..|.+--|
T Consensus 220 L~SAt~e~Ny~~ia~lAk~-yg~~Vvv~s~~Din~ak~L 257 (389)
T TIGR00381 220 LASANLDLDYEKIANAAKK-YGHVVLSWTIMDINMQKTL 257 (389)
T ss_pred EEecCchhhHHHHHHHHHH-hCCeEEEEcCCcHHHHHHH
Confidence 66677774444 4444444 498777666 888876544
No 273
>PF09926 DUF2158: Uncharacterized small protein (DUF2158); InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function.
Probab=20.54 E-value=63 Score=24.93 Aligned_cols=12 Identities=42% Similarity=0.579 Sum_probs=10.0
Q ss_pred CcccEEEecCCC
Q 003740 257 LPGDIVHLCMGD 268 (799)
Q Consensus 257 vvGDiv~l~~Gd 268 (799)
.+||+|.|+.|-
T Consensus 2 ~~GDvV~LKSGG 13 (53)
T PF09926_consen 2 KIGDVVQLKSGG 13 (53)
T ss_pred CCCCEEEEccCC
Confidence 589999998884
No 274
>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=20.35 E-value=1.6e+02 Score=31.55 Aligned_cols=45 Identities=18% Similarity=0.344 Sum_probs=32.8
Q ss_pred ccCCCcccHHHHHHHHHhC-CCE---EEEEcCCCHHHH------HHHHHHcCCcc
Q 003740 657 IKDPMRPGVKESVAICRSA-GIT---VRMVTGDNINTA------KAIARECGILT 701 (799)
Q Consensus 657 ~~D~~R~~v~~aI~~l~~a-GI~---v~mlTGD~~~tA------~aiA~~~GI~~ 701 (799)
+...+|.+.++-++.|++. |++ +.++-||++... ...|+++||..
T Consensus 9 iA~~i~~~l~~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~ 63 (293)
T PRK14185 9 ISAQIKQEIAAEVAEIVAKGGKRPHLAAILVGHDGGSETYVANKVKACEECGFKS 63 (293)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 4456788888899999877 665 466778887654 44678889854
No 275
>PF12017 Tnp_P_element: Transposase protein; InterPro: IPR021896 Protein in this family are transposases found in insects. This region is about 230 amino acids in length and is found associated with PF05485 from PFAM.
Probab=20.34 E-value=1.4e+02 Score=30.84 Aligned_cols=37 Identities=22% Similarity=0.242 Sum_probs=34.0
Q ss_pred HHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHcCCcc
Q 003740 665 VKESVAICRSAGITVRMVTGDNINTAKAIARECGILT 701 (799)
Q Consensus 665 v~~aI~~l~~aGI~v~mlTGD~~~tA~aiA~~~GI~~ 701 (799)
.++.|+.|+++|+.|+=++-|.-.+=...-+++||..
T Consensus 198 l~~iI~~l~~~g~~VvAivsD~g~~N~~~w~~Lgi~~ 234 (236)
T PF12017_consen 198 LKNIIEKLHEIGYNVVAIVSDMGSNNISLWRELGISE 234 (236)
T ss_pred HHHHHHHHHHCCCEEEEEECCCCcchHHHHHHcCCCC
Confidence 3678999999999999999999999999999999964
No 276
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=20.33 E-value=88 Score=30.10 Aligned_cols=23 Identities=30% Similarity=0.494 Sum_probs=20.5
Q ss_pred cccHHHHHHHHHhCCCEEEEEcC
Q 003740 662 RPGVKESVAICRSAGITVRMVTG 684 (799)
Q Consensus 662 R~~v~~aI~~l~~aGI~v~mlTG 684 (799)
-|+|.++++.+.+.|.+++|+|-
T Consensus 31 ~~~v~~~L~~l~~~Gy~IvIvTN 53 (159)
T PF08645_consen 31 PPGVPEALRELHKKGYKIVIVTN 53 (159)
T ss_dssp -TTHHHHHHHHHHTTEEEEEEEE
T ss_pred chhHHHHHHHHHhcCCeEEEEeC
Confidence 45799999999999999999995
No 277
>PRK06788 flagellar motor switch protein; Validated
Probab=20.23 E-value=1.4e+02 Score=27.28 Aligned_cols=71 Identities=17% Similarity=0.227 Sum_probs=47.5
Q ss_pred EEEecCCCCcccEEEecCCCeecccEEEEeeceeEEecccccCCCCccccCCCCCEEEccceeee-ceEEEEEEEEcccc
Q 003740 249 RKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQN-GSCKMLVTTVGMRT 327 (799)
Q Consensus 249 ~~i~~~~LvvGDiv~l~~Gd~vPaDg~ll~g~~l~vDeS~lTGEs~pv~k~~~~~~v~sGt~v~~-G~~~~~V~~vG~~T 327 (799)
..+...++.++|++.++.||+||.|-.+ ..|+...-++...|.|..... +..-+.++.+..+-
T Consensus 40 aeLG~t~ltl~DlL~L~vGDVI~Ldk~~----------------~dpv~v~Vng~~~f~G~~Gv~~~~~AVrItei~~~~ 103 (119)
T PRK06788 40 VKLGKASITLGDVKQLKVGDVLEVEKNL----------------GHKVDVYLSNMKVGIGEAIVMDEKFGIIISEIEADK 103 (119)
T ss_pred EEEecceecHHHHhCCCCCCEEEeCCcC----------------CCCEEEEECCEEEEEEEEEEECCEEEEEEEEecChH
Confidence 4566788899999999999999987332 122222223334777776665 56678888888877
Q ss_pred hhHHHHHh
Q 003740 328 QWGKLMAT 335 (799)
Q Consensus 328 ~~g~i~~~ 335 (799)
....+|..
T Consensus 104 ~~~~~~~~ 111 (119)
T PRK06788 104 KQAALMKA 111 (119)
T ss_pred HHHHHHHH
Confidence 66666543
No 278
>cd01019 ZnuA Zinc binding protein ZnuA. These proteins have been shown to function as initial receptors in the ABC uptake of Zn2+. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a single helix and bind their specific ligands in the cleft between these domains. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=20.15 E-value=2.3e+02 Score=30.16 Aligned_cols=54 Identities=17% Similarity=0.166 Sum_probs=41.3
Q ss_pred CcceeeeeecccCCCc---ccHHHHHHHHHhCCCEEEEE-cCCCHHHHHHHHHHcCCc
Q 003740 647 EGYTCIGIVGIKDPMR---PGVKESVAICRSAGITVRMV-TGDNINTAKAIARECGIL 700 (799)
Q Consensus 647 ~~~~~lg~~~~~D~~R---~~v~~aI~~l~~aGI~v~ml-TGD~~~tA~aiA~~~GI~ 700 (799)
-++..++++++...-. .+..+.++.+++.+++++.. +.-+..+++.||++.|+.
T Consensus 196 ~gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e~~~~~~~~~~ia~~~g~~ 253 (286)
T cd01019 196 YGLTQAGVFTIDPEIDPGAKRLAKIRKEIKEKGATCVFAEPQFHPKIAETLAEGTGAK 253 (286)
T ss_pred cCCceeeeecCCCCCCCCHHHHHHHHHHHHHcCCcEEEecCCCChHHHHHHHHhcCce
Confidence 4566777777654333 34558899999999997766 677899999999999973
No 279
>cd00738 HGTP_anticodon HGTP anticodon binding domain, as found at the C-terminus of histidyl, glycyl, threonyl and prolyl tRNA synthetases, which are classified as a group of class II aminoacyl-tRNA synthetases (aaRS). In aaRSs, the anticodon binding domain is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only. This domain is also found in the accessory subunit of mitochondrial polymerase gamma (Pol gamma b).
Probab=20.11 E-value=1.7e+02 Score=24.47 Aligned_cols=47 Identities=21% Similarity=0.150 Sum_probs=36.6
Q ss_pred eecccC---CCcccHHHHHHHHHhCCCEEEE-EcCCCHHHHHHHHHHcCCc
Q 003740 654 IVGIKD---PMRPGVKESVAICRSAGITVRM-VTGDNINTAKAIARECGIL 700 (799)
Q Consensus 654 ~~~~~D---~~R~~v~~aI~~l~~aGI~v~m-lTGD~~~tA~aiA~~~GI~ 700 (799)
++.+.+ ..++.+.+..+.|+++|+++.+ .++.+..-...-|.+.|+.
T Consensus 6 ii~~~~~~~~~~~~a~~~~~~Lr~~g~~v~~~~~~~~~~k~~~~a~~~g~~ 56 (94)
T cd00738 6 IVPLTDPRVEAREYAQKLLNALLANGIRVLYDDRERKIGKKFREADLRGVP 56 (94)
T ss_pred EEECCCCcHHHHHHHHHHHHHHHHCCCEEEecCCCcCHhHHHHHHHhCCCC
Confidence 344455 5677888888999999999998 4567788888888888874
No 280
>cd00958 DhnA Class I fructose-1,6-bisphosphate (FBP) aldolases of the archaeal type (DhnA homologs) found in bacteria and archaea. Catalysis of the enzymes proceeds via a Schiff-base mechanism like other class I aldolases, although this subfamily is clearly divergent based on sequence similarity to other class I and class II (metal dependent) aldolase subfamilies.
Probab=20.05 E-value=4e+02 Score=27.14 Aligned_cols=23 Identities=13% Similarity=0.115 Sum_probs=17.8
Q ss_pred CCCcccHHHHHHHHHhCCCEEEE
Q 003740 659 DPMRPGVKESVAICRSAGITVRM 681 (799)
Q Consensus 659 D~~R~~v~~aI~~l~~aGI~v~m 681 (799)
+.....+++..+.|++.|+++++
T Consensus 105 ~~~~~~i~~v~~~~~~~g~~~ii 127 (235)
T cd00958 105 REMLEELARVAAEAHKYGLPLIA 127 (235)
T ss_pred HHHHHHHHHHHHHHHHcCCCEEE
Confidence 34456788888889999998765
No 281
>cd05014 SIS_Kpsf KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-phosphate to arabinose 5-phosphate. This is the second step in the CMP-Kdo biosynthesis pathway.
Probab=20.04 E-value=1e+02 Score=27.82 Aligned_cols=28 Identities=14% Similarity=0.205 Sum_probs=24.4
Q ss_pred cccHHHHHHHHHhCCCEEEEEcCCCHHH
Q 003740 662 RPGVKESVAICRSAGITVRMVTGDNINT 689 (799)
Q Consensus 662 R~~v~~aI~~l~~aGI~v~mlTGD~~~t 689 (799)
-+++.++++.+++.|++|+.+|+.....
T Consensus 60 t~~~~~~~~~a~~~g~~vi~iT~~~~s~ 87 (128)
T cd05014 60 TDELLNLLPHLKRRGAPIIAITGNPNST 87 (128)
T ss_pred CHHHHHHHHHHHHCCCeEEEEeCCCCCc
Confidence 3689999999999999999999976544
Done!