Query 003742
Match_columns 799
No_of_seqs 209 out of 1141
Neff 5.1
Searched_HMMs 46136
Date Thu Mar 28 11:14:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003742.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003742hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2099 Glycogen phosphorylase 100.0 2E-262 4E-267 2118.1 52.3 775 11-799 7-794 (843)
2 TIGR02093 P_ylase glycogen/sta 100.0 3E-252 6E-257 2157.4 64.8 749 36-799 1-759 (794)
3 cd04300 GT1_Glycogen_Phosphory 100.0 5E-250 1E-254 2145.7 66.7 752 33-799 1-762 (797)
4 PRK14985 maltodextrin phosphor 100.0 7E-250 1E-254 2134.8 65.3 751 27-799 5-761 (798)
5 PRK14986 glycogen phosphorylas 100.0 4E-248 1E-252 2126.5 69.0 760 23-799 8-775 (815)
6 PF00343 Phosphorylase: Carboh 100.0 3E-228 7E-233 1939.6 43.2 668 116-799 1-676 (713)
7 COG0058 GlgP Glucan phosphoryl 100.0 3E-203 7E-208 1733.7 42.7 701 28-799 5-713 (750)
8 cd04299 GT1_Glycogen_Phosphory 100.0 4E-136 8E-141 1199.7 40.4 546 84-757 85-677 (778)
9 TIGR02094 more_P_ylases alpha- 100.0 3E-131 7E-136 1138.8 36.6 543 87-756 1-587 (601)
10 cd03791 GT1_Glycogen_synthase_ 99.7 5.7E-17 1.2E-21 182.0 20.4 411 131-719 8-426 (476)
11 TIGR02095 glgA glycogen/starch 99.6 3.2E-15 6.9E-20 169.0 18.4 402 134-719 12-421 (473)
12 PRK00654 glgA glycogen synthas 99.6 8.8E-14 1.9E-18 157.6 19.1 307 297-719 98-412 (466)
13 PRK14098 glycogen synthase; Pr 99.5 3.1E-13 6.8E-18 154.8 16.1 288 332-719 141-435 (489)
14 PRK14099 glycogen synthase; Pr 99.3 4.3E-11 9.3E-16 137.2 18.4 303 304-719 115-428 (485)
15 PLN02939 transferase, transfer 99.3 2E-10 4.3E-15 138.7 23.9 311 304-719 594-915 (977)
16 PLN02316 synthase/transferase 98.5 7E-07 1.5E-11 110.0 14.8 210 449-719 760-982 (1036)
17 COG0297 GlgA Glycogen synthase 97.8 8.9E-05 1.9E-09 85.7 10.5 334 332-769 130-481 (487)
18 cd03793 GT1_Glycogen_synthase_ 97.4 0.0013 2.9E-08 77.3 13.0 208 441-700 217-507 (590)
19 PF08323 Glyco_transf_5: Starc 97.2 0.00025 5.4E-09 74.9 3.7 213 136-462 13-227 (245)
20 PF00534 Glycos_transf_1: Glyc 96.5 0.0046 9.9E-08 59.8 5.7 131 559-717 10-140 (172)
21 cd03805 GT1_ALG2_like This fam 96.4 0.011 2.4E-07 64.5 8.5 148 560-724 207-354 (392)
22 TIGR02149 glgA_Coryne glycogen 96.3 0.015 3.2E-07 63.4 9.2 133 560-719 197-330 (388)
23 cd03813 GT1_like_3 This family 96.2 0.025 5.5E-07 64.9 10.7 122 562-709 291-412 (475)
24 cd01635 Glycosyltransferase_GT 96.1 0.0068 1.5E-07 59.3 4.9 119 569-716 109-228 (229)
25 cd03788 GT1_TPS Trehalose-6-Ph 96.1 0.18 3.9E-06 58.2 17.1 132 562-702 262-400 (460)
26 PF11897 DUF3417: Protein of u 96.0 0.0039 8.4E-08 59.6 2.2 44 54-100 73-118 (118)
27 cd03821 GT1_Bme6_like This fam 96.0 0.016 3.5E-07 60.6 6.9 132 560-719 199-330 (375)
28 cd03796 GT1_PIG-A_like This fa 95.9 0.017 3.7E-07 64.2 7.2 192 561-789 190-385 (398)
29 TIGR03449 mycothiol_MshA UDP-N 95.3 0.066 1.4E-06 59.1 8.9 136 560-718 215-351 (405)
30 cd03795 GT1_like_4 This family 95.1 0.026 5.6E-07 59.9 4.8 127 562-718 189-315 (357)
31 cd03808 GT1_cap1E_like This fa 95.0 0.032 7E-07 57.8 5.3 129 561-719 185-313 (359)
32 cd03792 GT1_Trehalose_phosphor 94.8 0.11 2.3E-06 57.1 8.8 135 560-718 186-322 (372)
33 PLN00142 sucrose synthase 94.4 0.1 2.2E-06 64.2 8.1 144 555-719 564-716 (815)
34 TIGR02470 sucr_synth sucrose s 93.8 0.17 3.6E-06 62.3 8.2 145 555-719 541-693 (784)
35 cd03807 GT1_WbnK_like This fam 93.8 0.14 3.1E-06 53.2 6.8 121 560-708 189-309 (365)
36 cd03811 GT1_WabH_like This fam 93.7 0.083 1.8E-06 54.4 4.8 130 560-720 185-314 (353)
37 cd03801 GT1_YqgM_like This fam 93.5 0.24 5.1E-06 51.1 7.7 132 560-720 195-326 (374)
38 cd03819 GT1_WavL_like This fam 93.5 0.18 3.9E-06 53.7 7.1 132 560-717 181-312 (355)
39 TIGR02400 trehalose_OtsA alpha 93.3 3.1 6.7E-05 48.3 17.1 131 563-705 258-398 (456)
40 cd03817 GT1_UGDG_like This fam 93.1 0.21 4.5E-06 52.4 6.7 131 560-719 198-328 (374)
41 PRK15484 lipopolysaccharide 1, 93.0 0.38 8.2E-06 53.7 9.0 136 560-717 189-325 (380)
42 cd03800 GT1_Sucrose_synthase T 93.0 0.27 5.9E-06 53.3 7.6 134 561-718 217-351 (398)
43 cd03799 GT1_amsK_like This is 92.8 0.13 2.7E-06 54.6 4.7 136 562-724 177-317 (355)
44 TIGR02472 sucr_P_syn_N sucrose 92.7 0.21 4.5E-06 56.8 6.5 139 560-718 244-389 (439)
45 cd03809 GT1_mtfB_like This fam 92.5 0.26 5.7E-06 51.9 6.6 120 561-706 192-311 (365)
46 cd03818 GT1_ExpC_like This fam 91.9 0.36 7.8E-06 53.6 7.0 137 560-718 207-349 (396)
47 cd03804 GT1_wbaZ_like This fam 91.8 0.13 2.8E-06 55.6 3.3 112 566-717 197-308 (351)
48 cd03812 GT1_CapH_like This fam 91.6 0.31 6.8E-06 52.0 5.9 120 560-708 188-307 (358)
49 cd03798 GT1_wlbH_like This fam 91.3 0.58 1.3E-05 48.5 7.4 121 561-708 199-319 (377)
50 cd04962 GT1_like_5 This family 91.1 0.37 8E-06 51.9 5.9 128 560-719 193-320 (371)
51 cd03822 GT1_ecORF704_like This 91.1 0.49 1.1E-05 49.9 6.7 134 562-719 183-318 (366)
52 TIGR03088 stp2 sugar transfera 90.9 0.62 1.3E-05 50.8 7.4 131 561-718 191-321 (374)
53 PRK15427 colanic acid biosynth 90.5 0.76 1.6E-05 52.0 7.9 129 563-718 221-353 (406)
54 cd03794 GT1_wbuB_like This fam 90.5 0.51 1.1E-05 49.5 6.1 130 561-719 217-349 (394)
55 cd03806 GT1_ALG11_like This fa 89.9 0.77 1.7E-05 52.2 7.3 145 563-724 236-382 (419)
56 PRK15490 Vi polysaccharide bio 89.0 0.89 1.9E-05 54.2 7.1 128 561-719 395-522 (578)
57 cd05844 GT1_like_7 Glycosyltra 88.7 1 2.2E-05 48.5 6.8 128 564-718 188-319 (367)
58 PRK15179 Vi polysaccharide bio 88.3 0.96 2.1E-05 55.2 6.9 127 561-718 514-640 (694)
59 cd03823 GT1_ExpE7_like This fa 88.0 1.2 2.6E-05 46.6 6.7 125 562-719 189-313 (359)
60 PRK14501 putative bifunctional 87.5 19 0.00042 44.2 17.5 134 563-705 264-404 (726)
61 PLN02949 transferase, transfer 86.1 2.6 5.7E-05 49.0 8.6 141 564-724 268-412 (463)
62 cd03802 GT1_AviGT4_like This f 85.6 1.2 2.6E-05 47.1 5.2 123 565-719 172-294 (335)
63 PLN03063 alpha,alpha-trehalose 85.2 27 0.00058 43.7 17.1 126 564-702 279-415 (797)
64 cd03825 GT1_wcfI_like This fam 84.6 1.5 3.3E-05 46.6 5.4 124 560-718 187-313 (365)
65 cd03816 GT1_ALG1_like This fam 84.3 2.8 6.1E-05 47.4 7.7 141 562-725 230-372 (415)
66 TIGR02468 sucrsPsyn_pln sucros 83.9 1.8 3.8E-05 55.0 6.2 140 560-719 475-621 (1050)
67 cd03820 GT1_amsD_like This fam 82.3 2.8 6.1E-05 43.2 6.1 125 563-718 177-302 (348)
68 cd04949 GT1_gtfA_like This fam 81.0 2.1 4.5E-05 46.6 4.8 123 565-718 205-328 (372)
69 cd04955 GT1_like_6 This family 80.8 2.2 4.8E-05 45.5 4.9 114 566-707 195-308 (363)
70 cd04946 GT1_AmsK_like This fam 77.5 6.2 0.00013 44.6 7.4 129 563-718 229-359 (407)
71 PLN02871 UDP-sulfoquinovose:DA 76.0 4.3 9.4E-05 46.5 5.7 123 561-718 260-383 (465)
72 PRK10307 putative glycosyl tra 74.3 8.9 0.00019 42.8 7.5 128 560-718 225-356 (412)
73 cd03814 GT1_like_2 This family 74.2 5.4 0.00012 41.9 5.4 121 562-718 195-315 (364)
74 TIGR02918 accessory Sec system 71.0 6.5 0.00014 46.2 5.6 122 565-718 320-442 (500)
75 PF13692 Glyco_trans_1_4: Glyc 70.0 5.9 0.00013 36.6 4.1 103 563-700 1-104 (135)
76 cd04951 GT1_WbdM_like This fam 69.7 8.2 0.00018 41.0 5.6 120 560-708 184-303 (360)
77 PLN02275 transferase, transfer 69.3 14 0.00031 41.0 7.7 135 565-718 214-358 (371)
78 PHA01633 putative glycosyl tra 68.0 10 0.00022 42.6 6.1 113 562-705 146-261 (335)
79 PHA01630 putative group 1 glyc 49.2 14 0.00031 41.0 3.2 117 564-718 142-258 (331)
80 TIGR02398 gluc_glyc_Psyn gluco 47.8 1.7E+02 0.0037 34.8 11.7 139 549-704 275-423 (487)
81 PRK09922 UDP-D-galactose:(gluc 46.8 37 0.00079 37.3 5.9 124 565-718 181-307 (359)
82 TIGR03087 stp1 sugar transfera 45.7 33 0.00071 38.2 5.4 110 562-701 222-332 (397)
83 PRK10125 putative glycosyl tra 45.5 39 0.00085 38.5 6.0 56 659-719 300-355 (405)
84 PLN02501 digalactosyldiacylgly 33.9 65 0.0014 40.1 5.6 118 568-719 550-667 (794)
85 cd00127 DSPc Dual specificity 31.9 74 0.0016 29.8 4.6 38 331-372 81-121 (139)
86 PF14474 RTC4: RTC4-like domai 30.7 26 0.00057 33.9 1.4 32 344-375 85-117 (124)
87 PF00782 DSPc: Dual specificit 27.1 1.2E+02 0.0026 28.3 5.1 36 332-371 74-112 (133)
88 PLN02846 digalactosyldiacylgly 23.7 1E+02 0.0022 36.3 4.8 118 567-718 231-348 (462)
89 PF00814 Peptidase_M22: Glycop 23.1 43 0.00092 36.3 1.4 55 108-164 32-89 (268)
90 KOG0853 Glycosyltransferase [C 22.1 2E+02 0.0043 34.4 6.7 148 560-722 269-418 (495)
91 PF14407 Frankia_peptide: Ribo 22.0 25 0.00055 30.3 -0.4 41 92-132 2-42 (61)
92 COG5405 HslV ATP-dependent pro 20.4 83 0.0018 32.3 2.7 38 349-386 135-176 (178)
No 1
>KOG2099 consensus Glycogen phosphorylase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2e-262 Score=2118.12 Aligned_cols=775 Identities=52% Similarity=0.884 Sum_probs=754.5
Q ss_pred hhhhhccccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCceEEEE
Q 003742 11 EAAKLAKIPAAANPLANEPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYL 90 (799)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~k~~~~~~l~~~~g~~~~~at~~~~y~Ala~~vRD~l~~~w~~t~~~~~~~~~k~vyYl 90 (799)
+.++|+|||+...+...++.+++++|.+|+++++.+++..|++.+.|.|+|++|||.|+.+|++|+|+|.+.++||||||
T Consensus 7 ~~~~r~qis~r~~~~~~~~~e~~~~f~~H~~ftl~k~~~~~~~~~~yfA~a~tvRD~Lv~~W~rTqqhy~~~dpKrvYYL 86 (843)
T KOG2099|consen 7 DSEKRKQISVRGIAGVEDVAEVKKSFNRHLHFTLVKDRNVATPRDYYFALAHTVRDHLVGRWIRTQQHYYEKDPKRVYYL 86 (843)
T ss_pred ccchhhhcchhcccCCccHHHHHHHHHhheeeeeecCcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceeeEe
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EhhhccccchhHHhhccCcHHHHHHHHHHcCCChHHHHhhccccCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCCc
Q 003742 91 SMEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGL 170 (799)
Q Consensus 91 SmEfl~Gr~L~nnL~NLgi~~~~~eaL~~lg~~l~~i~~~E~D~~LgnGGLGrLAacfldS~A~LglP~~G~GlrY~~G~ 170 (799)
||||+|||+|+|.++||||.+.+.+||.+||+|+|+|.|+|+||||||||||||||||||||||||+|++||||||+||+
T Consensus 87 SlEf~mGRaL~Ntm~Nlglq~~~deAl~qlG~dlEel~e~E~DagLGNGGLGRLAaCFlDSMATlglpA~GYGlRYeyGi 166 (843)
T KOG2099|consen 87 SLEFYMGRALQNTMINLGLQNACDEALYQLGLDLEELEEQEEDAGLGNGGLGRLAACFLDSMATLGLPAYGYGLRYEYGI 166 (843)
T ss_pred ehHHhhhhHHHHHHHhccCcchhHHHHHHhCcCHHHHHhcCcCcCcCCcchHHHHHHHHHHHhhcCCccccccceeehhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEecCCceeeccccccccCCCcccccCCeeEEEEeCCeEEEcCCCceeeeCCeEEEEEEeeeccCCCCCCceEEEEEE
Q 003742 171 FKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLW 250 (799)
Q Consensus 171 F~Q~I~dG~QvE~pd~Wl~~g~pwe~~r~~~~~~V~f~G~v~~~~~g~~~w~~~~~v~av~yd~pi~gy~~~~~n~lRLW 250 (799)
|+|+|.+|||+|.||+||+.|||||+.|+++++||+|||+|+..++| .+|++++.|.|+|||+|||||.|++||+||||
T Consensus 167 F~QkI~~g~Q~E~~ddWL~~gnPWE~~R~e~~lPV~FyGkV~~~~~g-~kWid~q~V~A~~YD~PvPGyk~n~vntlRLW 245 (843)
T KOG2099|consen 167 FKQKITDGWQVEEPDDWLRYGNPWEKARPEVMLPVHFYGKVEHTPDG-SKWIDTQVVLAMPYDTPVPGYKNNTVNTLRLW 245 (843)
T ss_pred HHHHhcCCccccchHHHHHcCCchhhcCcceEeEEEEEEEEEeCCCc-ceeecceeEEEeccCCCCCCcccCcceeeeee
Confidence 99999999999999999999999999999999999999999988788 57999999999999999999999999999999
Q ss_pred eeccCCccccccccCcchhhhHhhhhhhhhccccccccCCCcchhhhhhhhhhhhhhhchHHHHHHHHHHccC------C
Q 003742 251 DAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKS------G 324 (799)
Q Consensus 251 ~a~v~~~~~~l~~~~~g~y~~a~~~~~~~~~It~~LYp~D~~~~Gk~lRLkQEyfl~~a~lqdiir~~~~~~g------~ 324 (799)
+|+ ++.+|||..||.|+|++|+..++.+|+||+||||+|+..+||+||||||||+|+||||||||||+...+ .
T Consensus 246 sak-a~~df~l~~fN~Gdy~~av~~~~~AenI~~VLYPnDnf~eGKeLRLKQqyf~caAtLqDIirRFk~sk~~~r~~~~ 324 (843)
T KOG2099|consen 246 SAK-APNDFDLKDFNVGDYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQQYFLCAATLQDIIRRFKSSKFGCREPVR 324 (843)
T ss_pred ccC-CCCCCCHHhccCchHHHHHHHHHhhhhceEEecCCCccccchhhhhhhhhhhhHHHHHHHHHHHhhcccCcccccc
Confidence 999 878999999999999999999999999999999999999999999999999999999999999985432 2
Q ss_pred ccccCCCCceeEEeCCCcccccHHHHHHHHHhhcCCCHHHHHHHhccceEeeecCCCcchhccccHHHHHHhchhHHHHH
Q 003742 325 RQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEII 404 (799)
Q Consensus 325 ~~l~~l~~~~~ihlNdtHpalai~ElmR~L~de~gl~~~~A~~iv~~~~~yTnHT~~pealE~w~~~l~~~llpr~~~ii 404 (799)
..|++||++++||||||||+||||||||+|||.+|++|++||+||.+||+|||||++|||||+||++||+++||||+|||
T Consensus 325 ~~~~~FPdkVAiQlNDTHPtLaIpELmRiLvD~e~l~W~~AWdit~kT~AYTNHTVlpEALErWp~~L~e~LLPRHleII 404 (843)
T KOG2099|consen 325 TNFEEFPDKVAIQLNDTHPTLAIPELMRILVDLEGLDWDKAWDITQKTCAYTNHTVLPEALERWPVSLMEKLLPRHLEII 404 (843)
T ss_pred cchhhCcHhheeeccCCCccccHHHHHHHHHhcccCCHHHHHHHhhhheeeccccccHHHHHHhhHHHHHHhhhHHHHHH
Confidence 34999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCChhhhccccccccCCCCC-eeeEeeeccccCcchHHHHHHhHHHHHHhhhhhhhhhcCCCccc
Q 003742 405 EEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKP-VVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQN 483 (799)
Q Consensus 405 ~~In~~f~~~~~~~~~~~~~~~~~l~ii~~~~~~~-~v~Ma~Lai~~S~~vNGVS~lH~ei~k~~~f~~f~~l~P~kf~n 483 (799)
|+||.+|++.+.+.||.|.|++++|||+++++ ++ ++|||+||+++||.||||++||++|+|+.+|+||+++||+||+|
T Consensus 405 y~In~~~l~~i~~~fp~D~drlrrmsiiee~~-~~k~i~MA~L~ivgsHaVNGVa~iHSeilK~~~F~Df~e~~P~KFqN 483 (843)
T KOG2099|consen 405 YEINQRFLQTVAAKFPGDVDRLRRMSIIEENS-PEKRINMAHLCIVGSHAVNGVAEIHSEILKQSVFKDFYELEPEKFQN 483 (843)
T ss_pred HHHHHHHHHHHHHHCCCcHHHHhhhhhhhcCC-ccceeeeeeeeeecccccccHHHHHHHHHHHHHHHHHHHhChHHhcc
Confidence 99999999999999999999999999999832 23 99999999999999999999999999999999999999999999
Q ss_pred cccccCccccccccChhHHHHHHHhcCCcccccCcchHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCC
Q 003742 484 KTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPN 563 (799)
Q Consensus 484 iTNGV~~rrWl~~~np~L~~Li~~~ig~~~W~~d~~~l~~l~~~~~D~~~~~~~~~vk~~nK~~L~~~i~~~~g~~ldp~ 563 (799)
+||||||||||..|||.|++||++.|| ++|++|+++|.+|+++++|++|+++|+++|++||.+|++||++.+|+.+||+
T Consensus 484 kTNGITPRRWL~~cnP~LadlI~e~ig-e~~i~dl~~l~~L~~~a~d~~f~~~~a~vK~~NKlk~a~~le~e~~v~inp~ 562 (843)
T KOG2099|consen 484 KTNGITPRRWLLLCNPGLADLITEKIG-EEWITDLDQLTKLRKFADDEEFQREWAKVKQENKLKLAAYLEKEYGVKINPS 562 (843)
T ss_pred ccCCcCHHHHHHhcCchHHHHHHHHhh-hHhhhhHHHHHHHHHhcccHHHHHHHHHHHHhhHHHHHHHHHHHhCcccCcc
Confidence 999999999999999999999999999 5999999999999999999999999999999999999999999999999999
Q ss_pred ceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCCcccC
Q 003742 564 SLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVN 643 (799)
Q Consensus 564 slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~~~ 643 (799)
||||+|+||+||||||+||+||+++||++||+ +|.. ..+|||.||||||+|||+|||.|||||++||++|||||.|.
T Consensus 563 smFDiqVKRIHEYKRQllN~l~vi~~y~riK~-e~~k--~fvprtvm~GGKaapgY~mAK~Iiklit~V~dvVN~Dp~vg 639 (843)
T KOG2099|consen 563 SMFDIQVKRIHEYKRQLLNCLHVIYLYNRIKE-EPAK--AFVPRTVMIGGKAAPGYHMAKLIIKLITAVADVVNNDPEVG 639 (843)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh-hhhh--ccCceEEEEcCccCchhHHHHHHHHHHHHHHHHhcCChhhh
Confidence 99999999999999999999999999999999 7763 68999999999999999999999999999999999999999
Q ss_pred CcceEEEecCCChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccCcchhhhhhccccchhhccccccc
Q 003742 644 SYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQ 723 (799)
Q Consensus 644 ~~lkVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vg~en~~iFg~~~~e 723 (799)
++|||||+|||+||+||+||||+|+|+||||||+||||||||||||||+|||||||||||||+|++|+||+||||+++|+
T Consensus 640 d~LKViFl~nY~Vs~AE~iIPasdLSe~ISTAGtEASGT~NMKF~lNG~l~IGTlDGANVEm~eE~GeeN~FiFG~~~e~ 719 (843)
T KOG2099|consen 640 DRLKVIFLENYRVSLAEKIIPASDLSEQISTAGTEASGTGNMKFMLNGALTIGTLDGANVEMAEEAGEENFFIFGMRVED 719 (843)
T ss_pred heeEEEEecCcccchhhhccchHHHHHHhhhccccccCCCcceEEecCeEEEecccccchHHHHHcCcccEEEecccHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhccCCCC---CCCChHHHHHHHHHHcCCCCCCC---cHHHHHHHhhCCCCCCCCeeeecCccHHHHHHHHHHHhh
Q 003742 724 VPKLRKEREDGL---FKPDPRFEEAKQFIRSGAFGSYD---YNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQA 797 (799)
Q Consensus 724 v~~l~~~~~y~~---~~~~~~i~~v~d~i~~g~f~~~~---f~~i~~~l~~~~~~~~~D~y~vl~Df~sy~~~q~~v~~~ 797 (799)
|..|+++| |+. +...|+++.|+++|.+|.|+|.+ |++|.++|..+ |+|+|++||+||++||++|+++
T Consensus 720 V~~L~k~g-y~a~~~~~~~P~l~~v~~~i~sG~Fsp~~pd~fkd~~~~l~~h------D~f~V~~Df~sYi~~q~kVd~~ 792 (843)
T KOG2099|consen 720 VEALRKKG-YNAQEYYDPLPELKQVIDQIESGFFSPKNPDEFKDIVNMLMYH------DYFLVFADFEAYIKCQEKVDQL 792 (843)
T ss_pred HHHHHhhc-ccccccCCCCchHHHHHHHHhcCccCCCCchHHHHHHHhhhcc------ceEEeeCcHHHHHHHHHHHHHH
Confidence 99999887 665 45589999999999999999988 99999999985 9999999999999999999999
Q ss_pred hC
Q 003742 798 YK 799 (799)
Q Consensus 798 y~ 799 (799)
|+
T Consensus 793 y~ 794 (843)
T KOG2099|consen 793 YR 794 (843)
T ss_pred Hh
Confidence 95
No 2
>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.
Probab=100.00 E-value=2.7e-252 Score=2157.44 Aligned_cols=749 Identities=55% Similarity=0.911 Sum_probs=730.4
Q ss_pred HHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCceEEEEEhhhccccchhHHhhccCcHHHHHH
Q 003742 36 ISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTLTNAIGSLDIQNAYAD 115 (799)
Q Consensus 36 ~~~~l~~~~g~~~~~at~~~~y~Ala~~vRD~l~~~w~~t~~~~~~~~~k~vyYlSmEfl~Gr~L~nnL~NLgi~~~~~e 115 (799)
|.+||++++|+++++||+.++|+|||.+|||+++++|.+|++.+.+.++|+||||||||||||+|.|||+|||+++++++
T Consensus 1 ~~~~l~~~~~~~~~~a~~~~~y~ala~~vrd~l~~~w~~t~~~~~~~~~k~vyYlS~EfL~Gr~l~nnl~nlgl~~~~~~ 80 (794)
T TIGR02093 1 ILYHLEYTYGKTIDDATPRDLYTALAKAVRDRLVDRWLETQEKYRDNNQKQVYYLSAEFLMGRLLGNNLLNLGLYDEVKE 80 (794)
T ss_pred CHHHHHHHhCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEEehhhhcchHHHHHHHhCCCHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCChHHHHhhccccCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCCcceEEecCCceeeccccccccCCCcc
Q 003742 116 ALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWE 195 (799)
Q Consensus 116 aL~~lg~~l~~i~~~E~D~~LgnGGLGrLAacfldS~A~LglP~~G~GlrY~~G~F~Q~I~dG~QvE~pd~Wl~~g~pwe 195 (799)
||++||+|+++|+++|+||||||||||||||||||||||||+|++||||||+||||+|+|.||||+|.||+|+..++|||
T Consensus 81 ~l~~lg~~l~~i~~~E~Da~LGnGGLGrLAacfldS~Atl~~P~~GyGirY~yG~F~Q~I~dG~Q~E~pd~Wl~~~~pwe 160 (794)
T TIGR02093 81 ALRELGLDLEEILEIENDAGLGNGGLGRLAACFLDSLATLGLPATGYGIRYEYGLFKQKIVDGWQVELPDDWLRYGNPWE 160 (794)
T ss_pred HHHHhCCCHHHHHhcCCCCCCCCCchHHHHHHHHHHHHhCCCCeEEEEeeecCCceEEEEECCEEEEcCCCcCCCCCCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCeeEEEEeCCeEEEcCC-Ccee--eeCCeEEEEEEeeeccCCCCCCceEEEEEEeeccCCccccccccCcchhhhH
Q 003742 196 VVRHDVVFPVRFFGSVMVNPN-GTRK--WVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYESA 272 (799)
Q Consensus 196 ~~r~~~~~~V~f~G~v~~~~~-g~~~--w~~~~~v~av~yd~pi~gy~~~~~n~lRLW~a~v~~~~~~l~~~~~g~y~~a 272 (799)
++|++.+|+|+|+|+|+...+ |+.+ |++++.|+|||||+|||||+++++|+||||+|+ +.+.|||..||.|+|.+|
T Consensus 161 ~~r~~~~~~V~f~G~v~~~~~~g~~~~~w~~~~~v~avpyD~pi~Gy~~~~vn~LRLW~a~-~~~~f~l~~fn~gdy~~a 239 (794)
T TIGR02093 161 IRRPDRSYEVRFGGRVELQPDSDRLRPRWVPAETVLAIPYDVPVPGYRTDTVNTLRLWSAE-APEEFDLDAFNAGDYYEA 239 (794)
T ss_pred eecCCcEEEEEeCCEEeeeccCCcceeEeeCceEEEEeecceeecCCCCCceEEEEEEEec-CccccCHhhccCccHhhh
Confidence 999999999999999975443 6444 999999999999999999999999999999999 677899999999999999
Q ss_pred hhhhhhhhccccccccCCCcchhhhhhhhhhhhhhhchHHHHHHHHHHccCCccccCCCCceeEEeCCCcccccHHHHHH
Q 003742 273 AQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMR 352 (799)
Q Consensus 273 ~~~~~~~~~It~~LYp~D~~~~Gk~lRLkQEyfl~~a~lqdiir~~~~~~g~~~l~~l~~~~~ihlNdtHpalai~ElmR 352 (799)
+++++.+|+||++|||+|++++||+|||||||||||||+|||||+|++.+ .+|+.||++++|||||||||||+|||||
T Consensus 240 ~~~~~~~e~It~vLYp~D~~~~Gk~lRLkQeyfl~~aglqdiir~~~~~~--~~l~~l~~~~~ihlNDtHpalai~ElmR 317 (794)
T TIGR02093 240 VEEKNRAENISRVLYPNDSTYEGKELRLKQQYFFVSASLQDIIRRHLETH--PDLSDFPKKVAIQLNDTHPALAIPELMR 317 (794)
T ss_pred hhChhhcCccccCCcCCCCccchHHHHHHHHHHhhhhHHHHHHHHHHHhC--CChhhCCcceEEEecCCchHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999987 4899999999999999999999999999
Q ss_pred HHHhhcCCCHHHHHHHhccceEeeecCCCcchhccccHHHHHHhchhHHHHHHHHHHHHHHHHHHhCCCChhhhcccccc
Q 003742 353 LLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCIL 432 (799)
Q Consensus 353 ~L~de~gl~~~~A~~iv~~~~~yTnHT~~pealE~w~~~l~~~llpr~~~ii~~In~~f~~~~~~~~~~~~~~~~~l~ii 432 (799)
+|||++|++|++||++|+++|+||||||||||||+||++||+++||||++||++||++|++.++..+|.|++++.+||||
T Consensus 318 ~L~d~~gl~wd~Aw~iv~~~~~yTnHT~lpealE~wp~~l~~~~Lpr~~~iI~~In~~fl~~~~~~~p~d~~~~~~~sii 397 (794)
T TIGR02093 318 LLIDEEGMDWDEAWDITTKTFAYTNHTLLPEALEKWPVDLFQKLLPRHLEIIYEINRRFLAELAAKGPGDEAKIRRMSII 397 (794)
T ss_pred HHHHhcCCCHHHHHHHHHhheecccCCCChHHhCCcCHHHHHHHHhHHHHHHHHHhHHHHHHHHHhCCCcHHHHhheeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCC-eeeEeeeccccCcchHHHHHHhHHHHHHhhhhhhhhhcCCCccccccccCccccccccChhHHHHHHHhcCC
Q 003742 433 DNNPKKP-VVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKT 511 (799)
Q Consensus 433 ~~~~~~~-~v~Ma~Lai~~S~~vNGVS~lH~ei~k~~~f~~f~~l~P~kf~niTNGV~~rrWl~~~np~L~~Li~~~ig~ 511 (799)
++ +++ +|+||+||+++||+|||||+|||+|+|++||++|+.+||+||+|||||||+|||+.+|||+|++||+++||+
T Consensus 398 ~~--~~~~~v~Ma~LAi~~S~~vNGVS~lH~eilk~~~~~df~~l~P~kf~n~TNGVt~rrWl~~~np~L~~Li~~~ig~ 475 (794)
T TIGR02093 398 EE--GQSKRVRMANLAIVGSHSVNGVAALHTELLKEDLLKDFYELYPEKFNNKTNGITPRRWLRLANPGLSALLTETIGD 475 (794)
T ss_pred ec--CCCCEEehHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHhhCCCccCCcCCCCCccchhhhcCHHHHHHHHHhcCc
Confidence 98 434 899999999999999999999999999999999999999999999999999999999999999999999995
Q ss_pred cccccCcchHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCceeeccccccccchhhhhhhhhHHHHHH
Q 003742 512 DQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYK 591 (799)
Q Consensus 512 ~~W~~d~~~l~~l~~~~~D~~~~~~~~~vk~~nK~~L~~~i~~~~g~~ldp~slfd~~~kR~heYKRq~Lnil~ii~~y~ 591 (799)
+|.+|++.|++|+++++|++|+++|+++|++||++|++||++++|+.+||++|||+|||||||||||+||+||+++||.
T Consensus 476 -~W~~d~~~l~~l~~~~~D~~f~~~l~~vK~~nK~~L~~~i~~~~g~~ldp~slfdvq~KR~heYKRq~LNil~ii~~y~ 554 (794)
T TIGR02093 476 -DWLTDLDLLKKLEPYADDSEFLEEFRQVKQANKQRLAAYIKEHTGVEVDPNSIFDVQVKRLHEYKRQLLNVLHVIYLYN 554 (794)
T ss_pred -hhhhcHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCccccchhhheechhhhHHHHHHhhhHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCCcccCCcceEEEecCCChhhhhhcccccccccc
Q 003742 592 KLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQH 671 (799)
Q Consensus 592 ~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~~~~~lkVvFlenY~vslAe~lipa~Dv~~q 671 (799)
+|++ ||+. +++||||||||||||+|.+||+|||+|+++|++||+||+++++|||||||||+||+||+||||||||||
T Consensus 555 ~i~~-~p~~--~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~iN~Dp~v~~~lkVVFlenY~VslAe~iipaaDvseq 631 (794)
T TIGR02093 555 RIKE-DPPK--DIVPRTVIFGGKAAPGYHMAKLIIKLINSVAEVVNNDPAVGDKLKVVFVPNYNVSLAELIIPAADLSEQ 631 (794)
T ss_pred HHHh-CCCc--CCCCeEEEEEecCCCCcHHHHHHHHHHHHHHHHhccChhhCCceeEEEeCCCChHHHHHhhhhhhhhhh
Confidence 9999 7764 678999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCccccCCCcccceeccCceEEEeccCcchhhhhhccccchhhccccccchhhhhhccCCCC---CCCChHHHHHHHH
Q 003742 672 ISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGL---FKPDPRFEEAKQF 748 (799)
Q Consensus 672 is~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vg~en~~iFg~~~~ev~~l~~~~~y~~---~~~~~~i~~v~d~ 748 (799)
|||||+||||||||||||||||||||||||||||+++||+||+|+||++++||.+++.++ |+| |+.+|.|++|+|+
T Consensus 632 istag~EASGTsnMK~alNGaltlgtlDGanvEi~e~vG~eN~fiFG~~~~ev~~~~~~~-Y~~~~~y~~~~~l~~~~d~ 710 (794)
T TIGR02093 632 ISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIREEVGAENIFIFGLTVEEVEALREKG-YNPREYYEADPELKRVLDL 710 (794)
T ss_pred CCCCCccccCcchhHHHhcCcceeecccchhHHHHHHhCcccEEEcCCCHHHHHHHHHcC-CCchhcccCCHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999888 988 5889999999999
Q ss_pred HHcCCCCCCC---cHHHHHHHhhCCCCCCCCeeeecCccHHHHHHHHHHHhhhC
Q 003742 749 IRSGAFGSYD---YNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYK 799 (799)
Q Consensus 749 i~~g~f~~~~---f~~i~~~l~~~~~~~~~D~y~vl~Df~sy~~~q~~v~~~y~ 799 (799)
|.+|+|++++ |++||++|+.+ +|+||||+||+||++||++|+++|+
T Consensus 711 i~~g~f~~~~~~~f~~l~~~l~~~-----~D~y~vl~Df~sY~~~q~~v~~~Y~ 759 (794)
T TIGR02093 711 ISSGTFSPGDPGLFRPLYDSLLNH-----GDPFFVLADFAAYVDAQERVDALYR 759 (794)
T ss_pred HhcCCCCCCCchHHHHHHHHHccC-----CCeeeeeccHHHHHHHHHHHHHHhc
Confidence 9999998876 99999999987 8999999999999999999999995
No 3
>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=100.00 E-value=5.2e-250 Score=2145.67 Aligned_cols=752 Identities=54% Similarity=0.889 Sum_probs=732.2
Q ss_pred HHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCceEEEEEhhhccccchhHHhhccCcHHH
Q 003742 33 ASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTLTNAIGSLDIQNA 112 (799)
Q Consensus 33 k~~~~~~l~~~~g~~~~~at~~~~y~Ala~~vRD~l~~~w~~t~~~~~~~~~k~vyYlSmEfl~Gr~L~nnL~NLgi~~~ 112 (799)
+++|.+||++++|+++++||+.++|+|||.+|||+++++|.+|++.+.+.++|+||||||||||||+|.|||+|||++++
T Consensus 1 ~~~~~~~l~~~~~~~~~~a~~~~~y~al~~~vrd~l~~~w~~t~~~~~~~~~k~vyYlS~EfL~Gr~L~nnl~nLgl~~~ 80 (797)
T cd04300 1 KKAIVDHLEYTLGKDPEEATDRDLYQALAYAVRDRLVERWNRTQQYYYDKDAKRVYYLSLEFLMGRLLGNNLLNLGLYDE 80 (797)
T ss_pred ChHHHHHHHHHhCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEEchhhhcchHHHHHHHhCCcHHH
Confidence 36799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCChHHHHhhccccCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCCcceEEecCCceeeccccccccCC
Q 003742 113 YADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFS 192 (799)
Q Consensus 113 ~~eaL~~lg~~l~~i~~~E~D~~LgnGGLGrLAacfldS~A~LglP~~G~GlrY~~G~F~Q~I~dG~QvE~pd~Wl~~g~ 192 (799)
+++||++||+|+++|+++|+||||||||||||||||||||||||+|++||||||+||||+|+|++|||+|.||+|+..++
T Consensus 81 ~~~~L~~lg~~l~~i~~~E~Da~LGnGGLGrLAacfldS~AtLglP~~G~GirY~yG~F~Q~i~~G~Q~E~pd~Wl~~~~ 160 (797)
T cd04300 81 VREALAELGVDLEDLEEQEPDAGLGNGGLGRLAACFLDSLATLGLPGYGYGIRYEYGLFKQKIVDGYQVELPDNWLRYGN 160 (797)
T ss_pred HHHHHHHhCCCHHHHHhcCCCCCCCCCCcchhHHHHHHHHHhCCCCeEEEEecccCCCeEEEEECCEEEecCCCccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCeeEEEEeCCeEEEcCC-Ccee--eeCCeEEEEEEeeeccCCCCCCceEEEEEEeeccCCccccccccCcchh
Q 003742 193 PWEVVRHDVVFPVRFFGSVMVNPN-GTRK--WVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQY 269 (799)
Q Consensus 193 pwe~~r~~~~~~V~f~G~v~~~~~-g~~~--w~~~~~v~av~yd~pi~gy~~~~~n~lRLW~a~v~~~~~~l~~~~~g~y 269 (799)
|||++|++.+|+|+|+|+++...+ |+.+ |++++.|+|||||+|||||+++++|+||||+|+ +...|||+.||.|+|
T Consensus 161 pwe~~r~~~~~~V~f~G~~~~~~~~G~~~~~w~~~~~v~avpyDvpi~Gy~~~~~n~LRLW~a~-~~~~~dl~~fn~gdy 239 (797)
T cd04300 161 PWEIRRPDVAVPVRFGGRVEHYEDGGRLRVRWVDGETVLAVPYDTPIPGYGTNTVNTLRLWSAE-ASEEFDLDAFNRGDY 239 (797)
T ss_pred CceEecCCcEEEEEECCEEEEeecCCcceeeecCcceEEeeecceeecCCCCCceEEEEEEEee-CCCCcCHHHhcCCch
Confidence 999999999999999999985443 6544 999999999999999999999999999999999 677899999999999
Q ss_pred hhHhhhhhhhhccccccccCCCcchhhhhhhhhhhhhhhchHHHHHHHHHHccCCccccCCCCceeEEeCCCcccccHHH
Q 003742 270 ESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPE 349 (799)
Q Consensus 270 ~~a~~~~~~~~~It~~LYp~D~~~~Gk~lRLkQEyfl~~a~lqdiir~~~~~~g~~~l~~l~~~~~ihlNdtHpalai~E 349 (799)
.+++++++.+|+||++|||+||+++||+|||||||||||||+|||||+|++.++ +++.||++++|||||||||||+||
T Consensus 240 ~~a~~~~~~~~~It~~LYp~Ds~~~Gk~lRL~Qeyfl~sag~qdilr~~~~~~~--~~~~l~~~~~ihlNDtHpalai~E 317 (797)
T cd04300 240 IRAVEEKNRAENISKVLYPNDSTEEGKELRLKQQYFFVSASLQDIIRRFKKTHG--PLSEFPDKVAIQLNDTHPALAIPE 317 (797)
T ss_pred hhHHhhHHHhhhhhcccCCCCCchhHHHHHHHHHHHHhhhHHHHHHHHHHHhCC--ChhhCCCceEEEecCCcHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999984 799999999999999999999999
Q ss_pred HHHHHHhhcCCCHHHHHHHhccceEeeecCCCcchhccccHHHHHHhchhHHHHHHHHHHHHHHHHHHhCCCChhhhccc
Q 003742 350 LMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSM 429 (799)
Q Consensus 350 lmR~L~de~gl~~~~A~~iv~~~~~yTnHT~~pealE~w~~~l~~~llpr~~~ii~~In~~f~~~~~~~~~~~~~~~~~l 429 (799)
|||+|||++|++|++||+||+++|+||||||||||||+||++||+++||||++||++||++|++.+++++|.+++++.+|
T Consensus 318 lmR~L~d~~gl~w~~Aw~i~~~~~~yTnHT~lpealE~wp~~l~~~~lpr~~~II~~In~~~~~~~~~~~~~~~~~~~~l 397 (797)
T cd04300 318 LMRILVDEEGLDWDEAWDITTKTFAYTNHTLLPEALEKWPVDLFERLLPRHLEIIYEINRRFLEEVRAKYPGDEDRIRRM 397 (797)
T ss_pred HHHHHHHhcCCCHHHHHHHHHhheeeecCCCchHHhCccCHHHHHHHChHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCC-eeeEeeeccccCcchHHHHHHhHHHHHHhhhhhhhhhcCCCccccccccCccccccccChhHHHHHHHh
Q 003742 430 CILDNNPKKP-VVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKW 508 (799)
Q Consensus 430 ~ii~~~~~~~-~v~Ma~Lai~~S~~vNGVS~lH~ei~k~~~f~~f~~l~P~kf~niTNGV~~rrWl~~~np~L~~Li~~~ 508 (799)
|||++ +++ +||||+||+++||+|||||+|||+|+|+++|++|+++||+||+|||||||+|||+.+|||+|++||+++
T Consensus 398 ~ii~~--~~~~~v~Ma~LAi~~S~~vNGVS~lH~ei~k~~~~~df~~l~P~kf~n~TNGVt~rrWl~~~np~L~~Li~~~ 475 (797)
T cd04300 398 SIIEE--GGEKQVRMAHLAIVGSHSVNGVAALHSELLKETVFKDFYELYPEKFNNKTNGITPRRWLLQANPGLSALITET 475 (797)
T ss_pred ccccc--CCCCEEehHHHHHhcCcchhhhHHHHHHHHHHhhHHHHHhhCCCccCCcCCCCCcchhhhhcCHHHHHHHHHh
Confidence 99987 433 899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcccccCcchHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCceeeccccccccchhhhhhhhhHHH
Q 003742 509 LKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIY 588 (799)
Q Consensus 509 ig~~~W~~d~~~l~~l~~~~~D~~~~~~~~~vk~~nK~~L~~~i~~~~g~~ldp~slfd~~~kR~heYKRq~Lnil~ii~ 588 (799)
||+ +|.+|+++|++|+++++|++|+++|+++|++||++|++||++++|+.+||++|||||||||||||||+||+|++++
T Consensus 476 ig~-~W~~d~~~l~~l~~~~~D~~f~~~l~~~K~~nK~~L~~~i~~~~g~~ldp~slfdvq~KR~heYKRq~LNil~ii~ 554 (797)
T cd04300 476 IGD-DWVTDLDQLKKLEPFADDPAFLKEFRAIKQANKERLAAYIKKTTGVEVDPDSLFDVQVKRIHEYKRQLLNVLHIIH 554 (797)
T ss_pred cCc-hhhhChHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCCCccEEEEeeechhhhhhhhHHHhhHH
Confidence 995 9999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCCcccCCcceEEEecCCChhhhhhccccccc
Q 003742 589 RYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSEL 668 (799)
Q Consensus 589 ~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~~~~~lkVvFlenY~vslAe~lipa~Dv 668 (799)
||.+|++ ||+. +++||||||||||||+|.+||+|||+|+++|++|||||+++++|||||||||+||+||+|||||||
T Consensus 555 ~y~~i~~-~p~~--~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~in~Dp~v~~~lkVVFlenY~VslAe~iipaaDv 631 (797)
T cd04300 555 LYNRIKE-NPNA--DIVPRTFIFGGKAAPGYYMAKLIIKLINAVADVVNNDPDVGDKLKVVFLPNYNVSLAEKIIPAADL 631 (797)
T ss_pred HHHHHHh-CCCc--CCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHHhccChhcCCceEEEEeCCCChHHHHHhhhhhhh
Confidence 9999999 7764 679999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCccccCCCcccceeccCceEEEeccCcchhhhhhccccchhhccccccchhhhhhccCCCC---CCCChHHHHH
Q 003742 669 SQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGL---FKPDPRFEEA 745 (799)
Q Consensus 669 ~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vg~en~~iFg~~~~ev~~l~~~~~y~~---~~~~~~i~~v 745 (799)
||||||||+||||||||||||||||||||||||||||.++||+||+|+||++++||.+++.++ |+| |+.+|.|++|
T Consensus 632 seqis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vG~eN~fiFG~~~~ev~~~~~~~-y~~~~~y~~~~~l~~v 710 (797)
T cd04300 632 SEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIAEEVGEENIFIFGLTAEEVEALRANG-YYPADYYEADPELRRV 710 (797)
T ss_pred hhhCCCCCccccCCchhhHHhcCceeeecccchhHHHHHHhCcCcEEEeCCCHHHHHHHHHcC-CChHhhccCCHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999888 776 6889999999
Q ss_pred HHHHHcCCCCCCC---cHHHHHHHhhCCCCCCCCeeeecCccHHHHHHHHHHHhhhC
Q 003742 746 KQFIRSGAFGSYD---YNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYK 799 (799)
Q Consensus 746 ~d~i~~g~f~~~~---f~~i~~~l~~~~~~~~~D~y~vl~Df~sy~~~q~~v~~~y~ 799 (799)
+|+|.+|+|++++ |++||++|+.+ +|+||||+||+||++||++|+++|+
T Consensus 711 ~d~i~~g~f~~~~~~~f~~i~~~l~~~-----~D~y~vl~Df~~Y~~~q~~v~~~Y~ 762 (797)
T cd04300 711 LDQIASGFFSPGDPGEFRPLVDSLLNG-----NDEYLVLADFESYVDAQEKVDALYR 762 (797)
T ss_pred HHHHhcCCCCCCCcHHHHHHHHHHccC-----CCeeEeeccHHHHHHHHHHHHHHcc
Confidence 9999999998765 99999999987 8999999999999999999999995
No 4
>PRK14985 maltodextrin phosphorylase; Provisional
Probab=100.00 E-value=6.6e-250 Score=2134.82 Aligned_cols=751 Identities=44% Similarity=0.747 Sum_probs=731.9
Q ss_pred CCHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCceEEEEEhhhccccchhHHhhc
Q 003742 27 NEPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTLTNAIGS 106 (799)
Q Consensus 27 ~~~~~~k~~~~~~l~~~~g~~~~~at~~~~y~Ala~~vRD~l~~~w~~t~~~~~~~~~k~vyYlSmEfl~Gr~L~nnL~N 106 (799)
.++++|++.|.+||++++|+++.+||+.++|+|||.+|||+++++ ++.+.+.++|+||||||||||||+|.|||+|
T Consensus 5 ~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~y~ala~~vrd~l~~~----~~~~~~~~~k~vyYlS~EfL~Gr~l~nnl~n 80 (798)
T PRK14985 5 FNKKQFQAALTRQWQRFGLNSAAEMTPRQWWQAVSAALAELLRAQ----PAAKPVANQRHVNYISMEFLIGRLTGNNLLN 80 (798)
T ss_pred CCHHHHHHHHHHHHHHHhCCChhhCCHHHHHHHHHHHHHHHHHHH----HHHHhhcCCcEEEEechhhhccHHHHHHHHh
Confidence 467899999999999999999999999999999999999999998 5667777889999999999999999999999
Q ss_pred cCcHHHHHHHHHHcCCChHHHHhhccccCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCCcceEEecCCceeecccc
Q 003742 107 LDIQNAYADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAED 186 (799)
Q Consensus 107 Lgi~~~~~eaL~~lg~~l~~i~~~E~D~~LgnGGLGrLAacfldS~A~LglP~~G~GlrY~~G~F~Q~I~dG~QvE~pd~ 186 (799)
||++++++|||++||+|+++|+++|+||||||||||||||||||||||||+|++||||||+||||+|+|+||+|+|.||+
T Consensus 81 lgl~~~~~~al~~lg~~l~~i~~~E~Da~LGnGGLGrLAacfldS~AtL~lP~~GyGirY~yG~F~Q~I~dG~Q~E~pd~ 160 (798)
T PRK14985 81 LGWYDDVQDVLKAYDINLTDLLEEETDPALGNGGLGRLAACFLDSMATVGQPATGYGLNYQYGLFRQSFVDGKQVEAPDD 160 (798)
T ss_pred cCCHHHHHHHHHHcCCCHHHHhccCCCCCCCCcchHHHHHHHHHHHHhCCCCeEEEEeccCCCCeEEEEECCeEEECCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCcccccCCeeEEEEeCCeEEEcCCCceeeeCCeEEEEEEeeeccCCCCCCceEEEEEEeeccCCccccccccCc
Q 003742 187 WLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFND 266 (799)
Q Consensus 187 Wl~~g~pwe~~r~~~~~~V~f~G~v~~~~~g~~~w~~~~~v~av~yd~pi~gy~~~~~n~lRLW~a~v~~~~~~l~~~~~ 266 (799)
|+..++|||++|++.+|+|+|+|+++.. +|+.+|++++.|.|||||+|||||+|+++|+||||+|+ +..+|||..||+
T Consensus 161 Wl~~~~pwe~~r~~~~~~V~f~G~v~~~-~G~~~w~~~~~v~avpyDvpi~Gy~~~~~n~LRLW~a~-~~~~~~l~~fn~ 238 (798)
T PRK14985 161 WHRDSYPWFRHNEALDVQVGIGGKVTKQ-DGRERWEPAFTITGEAWDLPVVGYRNGVAQPLRLWQAT-HAHPFDLTKFND 238 (798)
T ss_pred cccCCCCceecCCCceEEEeeCCEEEee-CCcEEEECCEEEEEEeccccccCCCCCceEEEEEeEcC-CCCccCHHHcCC
Confidence 9999999999999999999999999754 78778999999999999999999999999999999999 455999999999
Q ss_pred chhhhHhhhhhhhhccccccccCCCcchhhhhhhhhhhhhhhchHHHHHHHHHHccCCccccCCCCceeEEeCCCccccc
Q 003742 267 GQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLA 346 (799)
Q Consensus 267 g~y~~a~~~~~~~~~It~~LYp~D~~~~Gk~lRLkQEyfl~~a~lqdiir~~~~~~g~~~l~~l~~~~~ihlNdtHpala 346 (799)
|+|.+|+++++.+|+||++|||+|++++||+|||||||||||||+|||||+|++.| ++|+.||++++|||||||||||
T Consensus 239 gdy~~a~en~~~~e~It~~LYp~D~~~~Gk~lRLkQEyfl~sa~vqdilr~~~~~~--~~l~~l~~~~~ihlNDtHpala 316 (798)
T PRK14985 239 GDFLRAEQQGIDAEKLTKVLYPNDNHTAGKKLRLMQQYFQCACSVADILRRHHLAG--RKLHELPDYEVIQLNDTHPTIA 316 (798)
T ss_pred cchhhccccchhhcchhceecCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhcC--CChhhCCCCcEEEecCCcHHHH
Confidence 99999999999999999999999999999999999999999999999999999876 6899999999999999999999
Q ss_pred HHHHHHHHHhhcCCCHHHHHHHhccceEeeecCCCcchhccccHHHHHHhchhHHHHHHHHHHHHHHHHHHhCCCChhhh
Q 003742 347 IPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKI 426 (799)
Q Consensus 347 i~ElmR~L~de~gl~~~~A~~iv~~~~~yTnHT~~pealE~w~~~l~~~llpr~~~ii~~In~~f~~~~~~~~~~~~~~~ 426 (799)
+|||||+|||++|++|++||++|+++|+||||||||||||+||++||+++||||++||++||++|+..++..+|.+.+++
T Consensus 317 i~ElmR~L~d~~gl~wd~Aw~iv~~~~~yTnHT~lpealE~w~~~l~~~~Lpr~~~ii~~in~~fl~~~~~~~~~d~~~~ 396 (798)
T PRK14985 317 IPELLRVLLDEHQLSWDDAWAITSKTFAYTNHTLMPEALECWDEKLVKSLLPRHMQIIKEINTRFKTLVEKTWPGDKKVW 396 (798)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHheeeecCCCChhhhCCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHHhCCCcHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccCCCCCeeeEeeeccccCcchHHHHHHhHHHHHHhhhhhhhhhcCCCccccccccCccccccccChhHHHHHH
Q 003742 427 PSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIIT 506 (799)
Q Consensus 427 ~~l~ii~~~~~~~~v~Ma~Lai~~S~~vNGVS~lH~ei~k~~~f~~f~~l~P~kf~niTNGV~~rrWl~~~np~L~~Li~ 506 (799)
.+||||++ + +|+||+||+++||+|||||+|||+|+++.||++|+++||+||+|||||||+|||+.+|||+|++||+
T Consensus 397 ~~~sii~~--~--~v~Ma~LAi~~S~~vNGVS~lH~eil~~~~f~df~~l~p~kf~nvTNGVt~rrWl~~~np~L~~Li~ 472 (798)
T PRK14985 397 AKLAVVHD--K--QVRMANLCVVSGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTNGITPRRWIKQCNPALAALLD 472 (798)
T ss_pred hhhhhccC--C--eeehHHHHHHhcchhHhhHHHHhchhHHhhhhhhHhhCCCccCCcCCCcCcchhhhhhCHHHHHHHH
Confidence 99999987 4 8999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCcccccCcchHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCceeeccccccccchhhhhhhhhH
Q 003742 507 KWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGA 586 (799)
Q Consensus 507 ~~ig~~~W~~d~~~l~~l~~~~~D~~~~~~~~~vk~~nK~~L~~~i~~~~g~~ldp~slfd~~~kR~heYKRq~Lnil~i 586 (799)
++||+ +|.+|++.+++|+++.+|++|+++|+++|++||++|++||++++|+.+||++|||+|||||||||||+||+|++
T Consensus 473 ~~ig~-~W~~d~~~l~~l~~~~~D~~f~~~~~~vK~~nK~~L~~~i~~~~g~~ldp~slfdvq~kR~heYKRq~Lnil~i 551 (798)
T PRK14985 473 KTLKK-EWANDLDQLINLEKYADDAAFRQQYREIKQANKVRLAEFVKQRTGIEINPQAIFDVQIKRLHEYKRQHLNLLHI 551 (798)
T ss_pred HhcCc-chhhChHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCchhcchhhHhhhhhhhhhhhHhhhh
Confidence 99995 99999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCCcccCCcceEEEecCCChhhhhhccccc
Q 003742 587 IYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGS 666 (799)
Q Consensus 587 i~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~~~~~lkVvFlenY~vslAe~lipa~ 666 (799)
++||.+|++ ||.. +++||||||||||||+|.+||+|||+|+++|++||+||+|+++|||||||||+|++||+|||||
T Consensus 552 i~~y~~i~~-~p~~--~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~in~Dp~v~~~lkVVFlenY~VslAe~lipaa 628 (798)
T PRK14985 552 LALYKEIRE-NPQA--DRVPRVFLFGAKAAPGYYLAKNIIFAINKVAEVINNDPLVGDKLKVVFLPDYCVSAAELLIPAA 628 (798)
T ss_pred HHHHHHHHh-CCCc--CCCCeEEEEeecCCCCcHHHHHHHHHHHHHHHHhcCChhhCCceeEEEeCCCChHHHHHHhhhh
Confidence 999999999 7764 6799999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCccccCCCcccceeccCceEEEeccCcchhhhhhccccchhhccccccchhhhhhccCCCC---CCCChHHH
Q 003742 667 ELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGL---FKPDPRFE 743 (799)
Q Consensus 667 Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vg~en~~iFg~~~~ev~~l~~~~~y~~---~~~~~~i~ 743 (799)
||||||||||+||||||||||||||||||||||||||||.++||++|+|+||++++||.+++.++ |+| |+.+|.|+
T Consensus 629 Dvseqis~ag~EASGTsnMK~amNGaLtlgtlDGanvEi~e~vG~eN~f~fG~~~~ev~~~~~~~-y~~~~~y~~~~~l~ 707 (798)
T PRK14985 629 DISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEQVGEENIFIFGHTVEQVKALLAKG-YDPVKWRKKDKVLD 707 (798)
T ss_pred hhhhhCCCCCccccCcchhHHHhcCceeeecccchHHHHHHHhCcCcEEEeCCCHHHHHHHHHcC-CChhhhccCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999888 998 57899999
Q ss_pred HHHHHHHcCCCCCCC---cHHHHHHHhhCCCCCCCCeeeecCccHHHHHHHHHHHhhhC
Q 003742 744 EAKQFIRSGAFGSYD---YNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYK 799 (799)
Q Consensus 744 ~v~d~i~~g~f~~~~---f~~i~~~l~~~~~~~~~D~y~vl~Df~sy~~~q~~v~~~y~ 799 (799)
+|+|+|.+|+|++.+ |++||++|+.+ +|+||||+||+||++||++|+++|+
T Consensus 708 ~v~d~i~~g~f~~~~~~~f~~i~~~l~~~-----~D~y~vl~Df~sY~~~q~~v~~~y~ 761 (798)
T PRK14985 708 AVLKELESGKYSDGDKHAFDQMLHSLKQG-----GDPYLVLADFAAYVEAQKQVDALYR 761 (798)
T ss_pred HHHHHHhcCCCCCCCchhHHHHHHHHhhC-----CCeeEeeccHHHHHHHHHHHHHHhc
Confidence 999999999998876 99999999987 8999999999999999999999995
No 5
>PRK14986 glycogen phosphorylase; Provisional
Probab=100.00 E-value=4.4e-248 Score=2126.50 Aligned_cols=760 Identities=45% Similarity=0.776 Sum_probs=740.1
Q ss_pred CCCCCCHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCceEEEEEhhhccccchhH
Q 003742 23 NPLANEPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTLTN 102 (799)
Q Consensus 23 ~~~~~~~~~~k~~~~~~l~~~~g~~~~~at~~~~y~Ala~~vRD~l~~~w~~t~~~~~~~~~k~vyYlSmEfl~Gr~L~n 102 (799)
....+++++|+++|.+||++++|+++++||+.++|+|||.+|||+++++|.+|++.+.+.++|+||||||||||||+|.|
T Consensus 8 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~y~ala~~vrd~l~~~w~~t~~~~~~~~~k~vyYlS~EfL~Gr~l~n 87 (815)
T PRK14986 8 ASPTLSVEALKHSIAYKLMFTIGKDPVIANKHEWLNATLFAVRDRLVERWLRSNRAQLSQETRQVYYLSMEFLIGRTLSN 87 (815)
T ss_pred CCCCCCHHHHHHHHHHHHHHHhCCChhhCCHHHHHHHHHHHHHHHHHHHHHHhHHHHHhcCCcEEEEEchhhhccHHHHH
Confidence 34456889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhccCcHHHHHHHHHHcCCChHHHHhhccccCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCCcceEEecCCceee
Q 003742 103 AIGSLDIQNAYADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEE 182 (799)
Q Consensus 103 nL~NLgi~~~~~eaL~~lg~~l~~i~~~E~D~~LgnGGLGrLAacfldS~A~LglP~~G~GlrY~~G~F~Q~I~dG~QvE 182 (799)
||+|||+++++++||++||+|+++|+++|+||||||||||||||||||||||||+|++||||||+||||+|+|.||||+|
T Consensus 88 nl~nlg~~~~~~~al~~lg~~l~~l~~~E~Da~LGnGGLGrLAac~ldS~A~LglP~~G~Gi~Y~yG~F~Q~I~dG~Q~E 167 (815)
T PRK14986 88 ALLSLGIYDDVQGALEAMGLDLEELIDEENDPGLGNGGLGRLAACFLDSLATLGLPGRGYGIRYDYGMFKQNIVNGRQKE 167 (815)
T ss_pred HHHhcCcHHHHHHHHHHcCCCHHHHHhcCCCCCCCCcchHHHHHHHHHHHHhCCCCeEEEEecccCCCeEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccCCCcccccCCeeEEEEeCCeEEEcCCCc-eeeeCCeEEEEEEeeeccCCCCCCceEEEEEEeeccCCccccc
Q 003742 183 VAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGT-RKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNL 261 (799)
Q Consensus 183 ~pd~Wl~~g~pwe~~r~~~~~~V~f~G~v~~~~~g~-~~w~~~~~v~av~yd~pi~gy~~~~~n~lRLW~a~v~~~~~~l 261 (799)
.||+|+..|+|||++|++.+|+|+|+|+++.. |. .+|++++.|+|||||+|||||+|+++|+||||+|+ +.++||+
T Consensus 168 ~pd~w~~~~~pwe~~r~~~~~~V~f~g~~~~~--g~~~~w~~~~~v~avpyD~pipgy~t~~vn~lRLW~a~-~~~~fd~ 244 (815)
T PRK14986 168 SPDYWLEYGNPWEFKRHNTRYKVRFGGRIQQE--GKKTRWIETEEILAVAYDQIIPGYDTDATNTLRLWSAQ-ASSEINL 244 (815)
T ss_pred cCCCccCCCCceeEecCCcEEEEEeCCEEEec--CceeEeeCCeeEEEEeCCccccCCCCCceEEEEEEEee-cCcccCH
Confidence 99999999999999999999999999999753 63 34999999999999999999999999999999999 6779999
Q ss_pred cccCcchhhhHhhhhhhhhccccccccCCCcchhhhhhhhhhhhhhhchHHHHHHHHHHccCCccccCCCCceeEEeCCC
Q 003742 262 FQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDT 341 (799)
Q Consensus 262 ~~~~~g~y~~a~~~~~~~~~It~~LYp~D~~~~Gk~lRLkQEyfl~~a~lqdiir~~~~~~g~~~l~~l~~~~~ihlNdt 341 (799)
..||.|+|..|+++++.+|+||++|||+|++++||+|||||||||||||+|||||+|++.+ ++|+.||++++||||||
T Consensus 245 ~~fn~g~y~~a~~~~n~~e~Is~~LYp~D~~y~Gk~lRLkQEyfl~~agv~di~r~~~~~~--~~l~~l~~~v~ihlNDt 322 (815)
T PRK14986 245 GKFNQGDYFAAVEDKNHSENVSRVLYPDDSTYSGRELRLRQEYFLVSATVQDILSRHYQLH--KTYDNLADKIAIHLNDT 322 (815)
T ss_pred hhcccccHHHHhhccchhhccccccCCCCCCcccHHHHHHHHHHhhhHHHHHHHHHHHHhC--CCHhhCCcccEEEecCC
Confidence 9999999999999999999999999999999999999999999999999999999999998 58999999999999999
Q ss_pred cccccHHHHHHHHHhhcCCCHHHHHHHhccceEeeecCCCcchhccccHHHHHHhchhHHHHHHHHHHHHHHHHHHhCCC
Q 003742 342 HPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSD 421 (799)
Q Consensus 342 Hpalai~ElmR~L~de~gl~~~~A~~iv~~~~~yTnHT~~pealE~w~~~l~~~llpr~~~ii~~In~~f~~~~~~~~~~ 421 (799)
||||++|||||+|||++|++|++||++|+++|+||||||||||||+||++||+++||||++||++||++|+..+++++|.
T Consensus 323 Hpa~~i~ElmR~L~d~~gl~~~eA~~iv~~~~~fTnHT~lpealE~w~~~l~~~~lpr~l~Ii~eIn~~fl~~~~~~~~~ 402 (815)
T PRK14986 323 HPVLSIPELMRLLIDEHKFSWDDAFEVCCQVFSYTNHTLMSEALETWPVDMLGKILPRHLQIIFEINDYFLKTLQEQYPN 402 (815)
T ss_pred cHHHHHHHHHHHHHHhcCCCHHHHHHHHHhhEEeecccCChHHhCcCCHHHHHHHccHhhhHHHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhhhccccccccCCCCC-eeeEeeeccccCcchHHHHHHhHHHHHHhhhhhhhhhcCCCccccccccCccccccccChh
Q 003742 422 LESKIPSMCILDNNPKKP-VVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPE 500 (799)
Q Consensus 422 ~~~~~~~l~ii~~~~~~~-~v~Ma~Lai~~S~~vNGVS~lH~ei~k~~~f~~f~~l~P~kf~niTNGV~~rrWl~~~np~ 500 (799)
+.+++.+||||++ +++ +|+||+||+++||+|||||+|||+|+|+.||+||+.+||+||.|||||||+|||+.+|||+
T Consensus 403 ~~~~~~~~sii~~--~~~~~v~Ma~LAl~~S~~vNGVS~lH~evl~~~~f~df~~l~P~kf~niTNGV~~rrWl~~~np~ 480 (815)
T PRK14986 403 DTDLLGRASIIDE--SNGRRVRMAWLAVVVSHKVNGVSELHSNLMVQSLFADFAKIFPGRFCNVTNGVTPRRWLALANPS 480 (815)
T ss_pred cHHHHhhhhcccc--CCCCEEeeHHHHhhccchhhHHHHHHHHHHHHHHHHHHHhhCCCcccccCCCCChhhHhhhcCHH
Confidence 9999999999987 434 8999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCcccccCcchHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCceeeccccccccchhhh
Q 003742 501 LSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQL 580 (799)
Q Consensus 501 L~~Li~~~ig~~~W~~d~~~l~~l~~~~~D~~~~~~~~~vk~~nK~~L~~~i~~~~g~~ldp~slfd~~~kR~heYKRq~ 580 (799)
|++||+++||+ +|.+|++++++|+++.+|++|+++|+++|++||++|++||++++|+.+||++|||||||||||||||+
T Consensus 481 L~~Li~~~ig~-~W~~d~~~l~~l~~~~~d~~f~~~l~~vk~~nK~~L~~~i~~~~g~~ldp~sLfd~qakR~heYKRq~ 559 (815)
T PRK14986 481 LSAVLDEHIGR-TWRTDLSQLSELKQHCDYPMVNHAVRQAKLENKKRLAEYIAQQLNVVVNPKALFDVQIKRIHEYKRQL 559 (815)
T ss_pred HHHHHHHhcCc-hhhhChHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCcccceeeeehhhhhhhhhh
Confidence 99999999995 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCCcccCCcceEEEecCCChhhhh
Q 003742 581 LNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAE 660 (799)
Q Consensus 581 Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~~~~~lkVvFlenY~vslAe 660 (799)
||+|+|++||.+|++ ||.. +++||||||||||||+|++||+|||+|+++|++|||||+++++|||||||||+|++||
T Consensus 560 LNil~~i~ry~~i~~-~p~~--~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~v~~~lkVVFlenY~vslAe 636 (815)
T PRK14986 560 MNVLHVITRYNRIKA-DPDA--KWVPRVNIFAGKAASAYYMAKHIIHLINDVAKVINNDPQIGDKLKVVFIPNYSVSLAQ 636 (815)
T ss_pred HHHhhhHHHHHHHHh-CCCc--CCCCeEEEEeecCCCCcHHHHHHHHHHHHHHHHhccChhhcCceeEEEeCCCCHHHHH
Confidence 999999999999998 7764 6799999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccccccccCCCccccCCCcccceeccCceEEEeccCcchhhhhhccccchhhccccccchhhhhhccCCCC---CC
Q 003742 661 LLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGL---FK 737 (799)
Q Consensus 661 ~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vg~en~~iFg~~~~ev~~l~~~~~y~~---~~ 737 (799)
+|||||||||||||||+||||||||||||||||||||||||||||.++||++|+|+||++++||.+++.++ |+| |+
T Consensus 637 ~lipg~Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~nvEi~e~vG~eN~~~fG~~~~ev~~~~~~~-Y~~~~~y~ 715 (815)
T PRK14986 637 LIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLEHVGEENIFIFGNTAEEVEALRRQG-YKPREYYE 715 (815)
T ss_pred HhhhhhhhhhhCCCCCccccCcchhhHHhcCceeeeccCCchhHHHHhcCCCcEEEeCCCHHHHHHHHHcC-CChhhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999888 998 57
Q ss_pred CChHHHHHHHHHHcCCCCCCC---cHHHHHHHhhCCCCCCCCeeeecCccHHHHHHHHHHHhhhC
Q 003742 738 PDPRFEEAKQFIRSGAFGSYD---YNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYK 799 (799)
Q Consensus 738 ~~~~i~~v~d~i~~g~f~~~~---f~~i~~~l~~~~~~~~~D~y~vl~Df~sy~~~q~~v~~~y~ 799 (799)
.+|.|++|+|+|.+|+|++++ |++||++|+.+ +|+||||+||+||++||++|+++|+
T Consensus 716 ~~~~l~~~~d~i~~g~f~~~~~~~f~~i~~~l~~~-----~D~y~vl~Df~sY~~aq~~v~~~y~ 775 (815)
T PRK14986 716 KDEELHQVLTQIGSGVFSPEEPGRYRDLVDSLINF-----GDHYQVLADYRSYVDCQDKVDELYR 775 (815)
T ss_pred CCHHHHHHHHHHhcCCCCCCCchhHHHHHHHhccC-----CCeeEeeccHHHHHHHHHHHHHHhc
Confidence 799999999999999998876 99999999987 8999999999999999999999995
No 6
>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....
Probab=100.00 E-value=3.3e-228 Score=1939.58 Aligned_cols=668 Identities=52% Similarity=0.887 Sum_probs=604.9
Q ss_pred HHHHcCCChHHHHhhccccCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCCcceEEecCCceeeccccccccCCCcc
Q 003742 116 ALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWE 195 (799)
Q Consensus 116 aL~~lg~~l~~i~~~E~D~~LgnGGLGrLAacfldS~A~LglP~~G~GlrY~~G~F~Q~I~dG~QvE~pd~Wl~~g~pwe 195 (799)
||++||+|+++|+++|+||||||||||||||||||||||||+|++||||||+||+|+|+|+||+|+|.||+||..|||||
T Consensus 1 Al~~lg~~~~~l~~~E~da~LGNGGLGRLAacfldSlAtl~~p~~GygirY~yG~F~Q~i~dG~QvE~pd~Wl~~g~pWe 80 (713)
T PF00343_consen 1 ALKELGFDLEELEEQEPDAGLGNGGLGRLAACFLDSLATLGIPAYGYGIRYEYGLFKQKIVDGWQVELPDNWLRYGNPWE 80 (713)
T ss_dssp HHHHTT--HHHHHTTS--EEESSSHHHHHHHHHHHHHHHTT-EEEEEEE--SCESEEEEEETTEEEEEEEBTTTTG-TTS
T ss_pred ChhHhCCCHHHHHhhCcCccccCcccchhHHHHHHHHHhCCCCceEEEeeecCCCceeEeecCCcccCCCCccCCCCceE
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCeeEEEEeCCeEEEcCCCce-eeeCCeEEEEEEeeeccCCCCCCceEEEEEEeeccCCccccccccCcchhhhHhh
Q 003742 196 VVRHDVVFPVRFFGSVMVNPNGTR-KWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYESAAQ 274 (799)
Q Consensus 196 ~~r~~~~~~V~f~G~v~~~~~g~~-~w~~~~~v~av~yd~pi~gy~~~~~n~lRLW~a~v~~~~~~l~~~~~g~y~~a~~ 274 (799)
++|++.+|+|+|+|+|+ ..+|+. +|+++++|+|||||+|||||+|++||+||||+|+ ++++|||..||.|+|.+|++
T Consensus 81 ~~r~~~~~~V~f~G~v~-~~~~~~~~~~~~~~v~av~yD~pi~Gy~~~~vn~LRLw~a~-~~~~fd~~~fn~gdy~~a~~ 158 (713)
T PF00343_consen 81 IRRPDESYEVKFGGRVE-DDGGRKVRWEDGETVLAVPYDMPIPGYRTKTVNTLRLWSAE-PSEEFDLESFNRGDYIKAVE 158 (713)
T ss_dssp EEEGGGEEEEEESEEEE--EETTEEEEESCEEEEEEEEEEEEE-SSSS-EEEEEEEEEE-ESSSTTHHHHHTTCHHHHHH
T ss_pred EecCCceEEEeccceEE-ecCCCcccccCCeEEEEEecCceeecCCCCceEEEEEeccC-CCcccChhhcCCCcHHHHHH
Confidence 99999999999999998 334554 4999999999999999999999999999999999 88999999999999999999
Q ss_pred hhhhhhccccccccCCCcchhhhhhhhhhhhhhhchHHHHHHHHHHccCCccccCCCCceeEEeCCCcccccHHHHHHHH
Q 003742 275 LHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLL 354 (799)
Q Consensus 275 ~~~~~~~It~~LYp~D~~~~Gk~lRLkQEyfl~~a~lqdiir~~~~~~g~~~l~~l~~~~~ihlNdtHpalai~ElmR~L 354 (799)
+++.+|+||+||||+|++++||+|||||||||||||||||||+|++.+ .+|++||++++||||||||||+||||||+|
T Consensus 159 ~~~~~e~is~vLYP~d~~~~Gk~LRLkQqyf~vsa~lqdiir~~~~~~--~~~~~~~~~~~ihlNdtHpa~ai~ElmR~L 236 (713)
T PF00343_consen 159 EKNRAENISKVLYPNDSTEEGKELRLKQQYFFVSASLQDIIRRFKKSH--GDLREFPDKVVIHLNDTHPAFAIPELMRIL 236 (713)
T ss_dssp HHHHHHGGGTBSS-SSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT--CCGGGHHHHEEEEEESSTTTTHHHHHHHHH
T ss_pred HHHHhhceeeecCCCCccccchhhhhhhHhhhhhhHHHHHHHHHHHhC--CChHHCCcceEEeecCCccHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998 589999999999999999999999999999
Q ss_pred HhhcCCCHHHHHHHhccceEeeecCCCcchhccccHHHHHHhchhHHHHHHHHHHHHHHHHHHhCCCChhhhcccccccc
Q 003742 355 MDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDN 434 (799)
Q Consensus 355 ~de~gl~~~~A~~iv~~~~~yTnHT~~pealE~w~~~l~~~llpr~~~ii~~In~~f~~~~~~~~~~~~~~~~~l~ii~~ 434 (799)
||++|++|++||++|+++|+||||||||||||+||++||+++||||+|||++||++|+..+...+|.|.+++.+|+++++
T Consensus 237 ~de~gl~~~eA~eiv~~~~~fTnHT~vpealE~wp~~l~~~~Lpr~~~ii~ein~~f~~~~~~~~~~d~~~~~~l~ii~~ 316 (713)
T PF00343_consen 237 MDEEGLSWDEAWEIVRKTFAFTNHTPVPEALEKWPVDLFERYLPRHLEIIYEINRRFLDELRRKYPGDEDQIRRLSIIEE 316 (713)
T ss_dssp HHTT---HHHHHHHHHHHEEEEE--SSGGGS-EEEHHHHHHHSHHHHHHHHHHHHHHHHHHHHHSTT-HHHHHHHSSEET
T ss_pred HHHcCCCHHHHHHHHHhceeeeccccccccccccCHHHHHHHChHHHHHHHHHhHHHHHHHHHHhcCcchhhhhcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCCCC-eeeEeeeccccCcchHHHHHHhHHHHHHhhhhhhhhhcCCCccccccccCccccccccChhHHHHHHHhcCCcc
Q 003742 435 NPKKP-VVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQ 513 (799)
Q Consensus 435 ~~~~~-~v~Ma~Lai~~S~~vNGVS~lH~ei~k~~~f~~f~~l~P~kf~niTNGV~~rrWl~~~np~L~~Li~~~ig~~~ 513 (799)
+++ .|+||+||+++||+|||||+|||+|+|+++|++|+++||+||+|||||||+|||+++|||+|++||+++|| ++
T Consensus 317 --~~~~~~~Ma~LAl~~S~~vNGVS~LH~ev~k~~~f~~f~~l~P~kf~nvTNGVh~rrWl~~~nP~L~~L~~~~iG-~~ 393 (713)
T PF00343_consen 317 --GNSKRFRMANLALRGSHSVNGVSKLHGEVLKQMVFKDFYELWPEKFGNVTNGVHPRRWLSQANPELSELITEYIG-DD 393 (713)
T ss_dssp --SSSCEEEHHHHHHHCESEEEESSHHHHHHHHHTTTHHHHHHSGGGEEE----B-TCCCCCCTSHHHHHHHHHHHT-SG
T ss_pred --cchhhcchhHHHHHhcccccchHHHHHHHHHHHHhhhhhhcCCceeeccccCccCcccccccCHHHHHHHHHHhc-cc
Confidence 544 99999999999999999999999999999999999999999999999999999999999999999999999 49
Q ss_pred cccCcchHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCceeeccccccccchhhhhhhhhHHHHHHHH
Q 003742 514 WVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKL 593 (799)
Q Consensus 514 W~~d~~~l~~l~~~~~D~~~~~~~~~vk~~nK~~L~~~i~~~~g~~ldp~slfd~~~kR~heYKRq~Lnil~ii~~y~~i 593 (799)
|.+|++.|++|.++++|+.|+++|+++|+++|.+|+++|++++|+.+||++|||+|||||||||||+||+|++++||.+|
T Consensus 394 W~~d~~~l~~l~~~~dd~~~~~~~~~vK~~~K~rl~~~i~~~~~~~ldp~slfdv~~rR~heYKRq~LniL~ii~~y~ri 473 (713)
T PF00343_consen 394 WRTDLEQLEKLEKFADDEEFQEELREVKQENKERLAEYIKKRTGVELDPDSLFDVQARRFHEYKRQLLNILHIIDRYNRI 473 (713)
T ss_dssp GGCSGGGGGGGGGGCCSHHHHHHHHHHHHHHHHHHHHHHHHHHSS---TTSEEEEEES-SCCCCTHHHHHHHHHHHHHHH
T ss_pred cccCHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcchhhhhhhhhcccccccCcccccHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCCcccCCcceEEEecCCChhhhhhcccccccccccC
Q 003742 594 KEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHIS 673 (799)
Q Consensus 594 ~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~~~~~lkVvFlenY~vslAe~lipa~Dv~~qis 673 (799)
++ +|+. ..+||||||||||||+|.+||+|||+|+++|++||+||+++++|||||||||||++||+||||||||+|||
T Consensus 474 k~-~p~~--~~~Pv~~IFaGKAhP~d~~gK~iIk~I~~va~~in~Dp~v~~~lkVvFlenYdvslA~~lipg~DVwln~p 550 (713)
T PF00343_consen 474 KN-NPNK--KIRPVQFIFAGKAHPGDYMGKEIIKLINNVAEVINNDPEVGDRLKVVFLENYDVSLAEKLIPGVDVWLNIP 550 (713)
T ss_dssp HH-STTS--CCS-EEEEEE----TT-HHHHHHHHHHHHHHHHHCT-TTTCCGEEEEEETT-SHHHHHHHGGG-SEEEE--
T ss_pred Hh-cccC--CCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHHHhcChhhccceeEEeecCCcHHHHHHHhhhhhhhhhCC
Confidence 99 7763 67999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCcccceeccCceEEEeccCcchhhhhhccccchhhccccccchhhhhhccCCCC---CCCChHHHHHHHHHH
Q 003742 674 TAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGL---FKPDPRFEEAKQFIR 750 (799)
Q Consensus 674 ~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vg~en~~iFg~~~~ev~~l~~~~~y~~---~~~~~~i~~v~d~i~ 750 (799)
|||+||||||||||||||+|||||||||||||.+++|+||+|+||++++||.+++.++ |+| ++.+|+|++|+|+|.
T Consensus 551 ~~p~EASGTSgMK~~~NGaL~lstlDG~niEi~e~vG~eN~fiFG~~~~ev~~~~~~g-Y~~~~~y~~~~~l~~vld~i~ 629 (713)
T PF00343_consen 551 TRPKEASGTSGMKAAMNGALNLSTLDGWNIEIAEAVGEENIFIFGLTAEEVEELRKNG-YNPREYYENDPELKRVLDQII 629 (713)
T ss_dssp -TTSSSS-SHHHHHHHTT-EEEEESSTCHHHHHHHH-GGGSEEES-BHHHHHHHHHHT--HHHHHHHHSHHHHHHHHHHH
T ss_pred CCCccccCCCcchhhcCCCeEEecccchhHHHHHhcCCCcEEEcCCCHHHHHHHHhcC-CCcccccccCHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999998887 887 477999999999999
Q ss_pred cCCCCCCC---cHHHHHHHhhCCCCCCCCeeeecCccHHHHHHHHHHHhhhC
Q 003742 751 SGAFGSYD---YNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYK 799 (799)
Q Consensus 751 ~g~f~~~~---f~~i~~~l~~~~~~~~~D~y~vl~Df~sy~~~q~~v~~~y~ 799 (799)
+|+|++.+ |++||++++.+ +|+|||++||+||++||++|+++|+
T Consensus 630 ~g~f~~~~~~~f~~i~~~~~~~-----~D~y~vl~Df~~Y~~~q~~v~~~Y~ 676 (713)
T PF00343_consen 630 SGFFSPGDPDEFKPIYDSLLMY-----NDEYLVLADFESYVEAQEKVDKAYR 676 (713)
T ss_dssp HTTTTTTSTTTTHHHHHHCHHH-----TTTT-HHHHHHHHHHHHHHHHHHHC
T ss_pred cCCCCCCCchhHHHHHhCcCCC-----CCcchhhhhHHHHHHHHHHHHHHhc
Confidence 99998833 99999997766 8999999999999999999999995
No 7
>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.4e-203 Score=1733.73 Aligned_cols=701 Identities=46% Similarity=0.738 Sum_probs=665.9
Q ss_pred CHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCceEEEEEhhhccccchhHHhhcc
Q 003742 28 EPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTLTNAIGSL 107 (799)
Q Consensus 28 ~~~~~k~~~~~~l~~~~g~~~~~at~~~~y~Ala~~vRD~l~~~w~~t~~~~~~~~~k~vyYlSmEfl~Gr~L~nnL~NL 107 (799)
+.++|+..|..++.+..|+++..||+.+||.|++..||+.+...|.+|++.+.+.+.|+|||+|||||+||++.|||+||
T Consensus 5 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~w~~a~~~~v~~~~~~~~~~~~~~~~~~~~~~~yy~s~efL~grl~~~~l~n~ 84 (750)
T COG0058 5 RLEQLAYNLWWSLDTTAGKLFRDADPEDWYEALHNPVRELLAADWLRLNQLARDEDFKQVYYLSMEFLIGRLLGNNLWNL 84 (750)
T ss_pred cHHHHHHHHHHHHHHHhccChhhCCHHHHHHHhhHHHHHHHhcCHHHHHHhhcchhHHHHHHHHHHHHHHHhhhcchhhh
Confidence 56889999999999999999999999999999999999999999999999999989999999999999999999999999
Q ss_pred CcHHHHHHHHHHcCCChHHHHhhccccCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCCcceEEecCCceeeccccc
Q 003742 108 DIQNAYADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDW 187 (799)
Q Consensus 108 gi~~~~~eaL~~lg~~l~~i~~~E~D~~LgnGGLGrLAacfldS~A~LglP~~G~GlrY~~G~F~Q~I~dG~QvE~pd~W 187 (799)
|+++.++++|+++|++++|+.+.|+||++| ||||||||||||||||||+|++||||||+||||+|++.||||+|.||.|
T Consensus 85 g~~~~~~~~l~~~~~~~~e~~~~e~~p~lg-GGLGrLAgcfldS~a~Lg~P~~G~Gl~Y~~GyF~Q~~~dG~Q~E~p~~w 163 (750)
T COG0058 85 GIYDDVQEALKELGYFLMEFGEHESDPGLG-GGLGRLAGCFLDSAADLGLPLTGYGLRYRYGYFRQSDVDGWQVELPDEW 163 (750)
T ss_pred cchHHHHhhHHhhhccHHHHhhcccCcccc-ccHHHHHHhHHHHHHhcCCCceEEEeeecCCceeeeccCCceEecchhh
Confidence 999999999999999999999999999999 9999999999999999999999999999999999998899999999999
Q ss_pred cccCCCcccccCCeeEEEEeCCeEEEcCCCceeeeCCeEEEEEEeeeccCCCCCCceEEEEEEeeccCCccccccccCcc
Q 003742 188 LEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDG 267 (799)
Q Consensus 188 l~~g~pwe~~r~~~~~~V~f~G~v~~~~~g~~~w~~~~~v~av~yd~pi~gy~~~~~n~lRLW~a~v~~~~~~l~~~~~g 267 (799)
+..|+|||++|+ . . |+|||+||+||++ ++|+||||+++++..+|+|..||.|
T Consensus 164 ~~~~~pwe~~r~---------------~----------~--a~~~d~~V~g~~~-~~~~lrlW~a~~~~~~~~l~~~n~~ 215 (750)
T COG0058 164 LKYGNPWEFLRD---------------A----------E--GVPYDVPVPGYDN-RVVTLRLWQAQVGRVPLYLLDFNVG 215 (750)
T ss_pred hccCCcceeecc---------------c----------C--CceeeeeEEeccC-cEEEEEEEEEecCccceEeecCCCc
Confidence 999999999763 0 1 5899999999999 9999999999977768888888887
Q ss_pred hhhhHhhhhhhhhccccccccCCCcchhhhhhhhhhhhhhhchHHHHHHHHHHccCCccccCCCCceeEEeCCCcccccH
Q 003742 268 QYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAI 347 (799)
Q Consensus 268 ~y~~a~~~~~~~~~It~~LYp~D~~~~Gk~lRLkQEyfl~~a~lqdiir~~~~~~g~~~l~~l~~~~~ihlNdtHpalai 347 (799)
++++.+|+||++|||+|| ++|||+|||||||||+|+|++++...++ +++.++ .||||||||||+
T Consensus 216 ------e~~~~~~~iT~~LYp~Ds----~elRl~Qeyfl~~agvq~I~~~~~~~~~--~~~~~~----~~lNdtHpa~~i 279 (750)
T COG0058 216 ------ENKNDARNITRVLYPGDS----KELRLKQEYFLGSAGVQDILARGHLEHH--DLDVLA----DHLNDTHPALAI 279 (750)
T ss_pred ------ccchhhhhHHhhcCCCCc----HHHHHhhhheeeeHHHHHHHHHhhhccc--cccchh----hhhcCCChhHhH
Confidence 478889999999999998 8999999999999999999999544442 566664 569999999999
Q ss_pred HHHHHHHHhhcCCCHHHHHHHhccceEeeecCCCcchhccccHHHHHHhchhHHHHHHHHHHHHHHHHHHhCCCChhhhc
Q 003742 348 PELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIP 427 (799)
Q Consensus 348 ~ElmR~L~de~gl~~~~A~~iv~~~~~yTnHT~~pealE~w~~~l~~~llpr~~~ii~~In~~f~~~~~~~~~~~~~~~~ 427 (799)
|||||+|+|++|++|++||++|+++|+||||||||||||+||++||+++||||++||++||.+|+..++..++.| ++.
T Consensus 280 ~ElmRll~d~~g~~~~~A~~~~~~~~~yTnHTplpeale~wp~~l~~~~lpr~~~ii~~in~~~l~~~~~~~~~~--~~~ 357 (750)
T COG0058 280 PELMRLLIDEEGLSWDEAWEIVRKTFVYTNHTPLPEALETWPVELFKKLLPRHLQIIYEINARFLPEVRLLYLGD--LIR 357 (750)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHhheeeeecCCCchhhhccCCHHHHHHHhhhhhhhHHHHHhhhhHHHHhhcccc--ccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999988 889
Q ss_pred cccccccCCCCCeeeEeeeccccCcchHHHHHHhHHHHHHhhhhhhhhhcCCCccccccccCccccccccChhHHHHHHH
Q 003742 428 SMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITK 507 (799)
Q Consensus 428 ~l~ii~~~~~~~~v~Ma~Lai~~S~~vNGVS~lH~ei~k~~~f~~f~~l~P~kf~niTNGV~~rrWl~~~np~L~~Li~~ 507 (799)
++++|++ |+||+||+++||+|||||+||+||+|++.|++|+.+||+||+|||||||+|||+..|||+|++++++
T Consensus 358 ~~~~i~~------v~Ma~lal~~S~~vNGVsklH~el~k~~~~~~~~~~~p~~i~nvTNGIt~rrWl~~~n~~L~~~~~~ 431 (750)
T COG0058 358 RGSPIEE------VNMAVLALVGSHSVNGVSKLHSELSKKMWFADFHGLYPEKINNVTNGITPRRWLAPANPGLADLLDE 431 (750)
T ss_pred cCCcccc------eehhhhhhhhhhhhHhHHHHHHHHHHHHHHHHhcccCccccccccCCcCCchhhhhhhHHHHHHHhh
Confidence 9999964 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCcccccCcchHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCceeeccccccccchhhhhhhhhHH
Q 003742 508 WLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAI 587 (799)
Q Consensus 508 ~ig~~~W~~d~~~l~~l~~~~~D~~~~~~~~~vk~~nK~~L~~~i~~~~g~~ldp~slfd~~~kR~heYKRq~Lnil~ii 587 (799)
.+|. .|..+++.++++..+++|+.|++.|+++|.+||++|++++++++|+.+||++|||||||||||||||+||+++++
T Consensus 432 ~ig~-~W~~~~~~l~~l~~~a~~~~~~e~i~~iK~~nk~~La~~i~~~~gi~~~p~~lfd~~~kRiheYKRq~Lnl~~i~ 510 (750)
T COG0058 432 KIGD-EWLNDLDILDELLWFADDKAFRELIAEIKRENKKRLAEEIADRTGIEVDPNALFDGQARRIHEYKRQLLNLLDIE 510 (750)
T ss_pred hhhh-hhhhhhhhhhHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhhhhcCCccCCCcceeeeehhhhhhhhhHHhHhhHH
Confidence 9994 999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCCcccCCcceEEEecCCChhhhhhcccccc
Q 003742 588 YRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSE 667 (799)
Q Consensus 588 ~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~~~~~lkVvFlenY~vslAe~lipa~D 667 (799)
++|..|++ | ..+|+++||||||||+|++||+|||+|+++|+++|+ ++|||||||||||+||+||||||
T Consensus 511 ~ly~~i~~-d-----~~prv~~iFaGKAhP~y~~aK~iIk~I~~~a~~in~------~lkVvFl~nYdvslA~~iipa~D 578 (750)
T COG0058 511 RLYRILKE-D-----WVPRVQIIFAGKAHPADYAAKEIIKLINDVADVINN------KLKVVFLPNYDVSLAELLIPAAD 578 (750)
T ss_pred HHHHHHhc-C-----CCCceEEEEeccCCCcchHHHHHHHHHHHHHHhhcc------cceEEEeCCCChhHHHhhccccc
Confidence 99999995 2 224566699999999999999999999999999997 78999999999999999999999
Q ss_pred cccccCCCccccCCCcccceeccCceEEEeccCcchhhhhhccccchhhccccccchhhhhhccCCCC---CCCChHHHH
Q 003742 668 LSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGL---FKPDPRFEE 744 (799)
Q Consensus 668 v~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vg~en~~iFg~~~~ev~~l~~~~~y~~---~~~~~~i~~ 744 (799)
|||||||||+||||||||||||||||||||||||||||.+++|++|+|+||++++||..++.++.+.. +..++.|+.
T Consensus 579 vweqis~a~~EASGTsnMK~alNGaltigtlDGanvEi~e~vg~~N~~~fG~~~~~v~~~~~~~~~~~~~y~~~~~~v~~ 658 (750)
T COG0058 579 VWEQIPTAGKEASGTSNMKAALNGALTLGTLDGANVEIYEHVGGENGWIFGETVEEVDALRADGYDPNALYYELENEVKP 658 (750)
T ss_pred ccccCCCCCccccCcCcchHHhcCCceeeccccHHHHHHHhcCCCceEEeCCchhhHHHHHhcccccHHHHHHHhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999988773332 356899999
Q ss_pred HHHHHHcCCCCCCC---cHHHHHHHhh-CCCCCCC-CeeeecCccHHHHHHHHHHHhhhC
Q 003742 745 AKQFIRSGAFGSYD---YNPLLDSLEG-NTGYGRG-DYFLVGYDFPSYLEAQDRVDQAYK 799 (799)
Q Consensus 745 v~d~i~~g~f~~~~---f~~i~~~l~~-~~~~~~~-D~y~vl~Df~sy~~~q~~v~~~y~ 799 (799)
+++.+++|.|+|.. |++++++|.. + + |+||+++||.+|++||+++++.|+
T Consensus 659 ~~~~~~~~~~~p~~~~~~~~~~~sl~~~~-----~~dr~~~~yd~~~Y~~aq~~~~~~~~ 713 (750)
T COG0058 659 VLDEIIDGRFSPGWKSRFKNLIDSLLPKF-----GTDRMMVLYDFKAYVPAQEEVDALYR 713 (750)
T ss_pred HHHHHhcccCCcccHHHHHHHHHHhhhcc-----CccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999865 9999999996 4 5 999999999999999999999985
No 8
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=100.00 E-value=3.8e-136 Score=1199.72 Aligned_cols=546 Identities=26% Similarity=0.412 Sum_probs=488.5
Q ss_pred CceEEEEEhhhccccchhHHhhccCcHHHHHHHHHHcCCChHHHHhhccccCCCCCCcccchhhhHhhhhccCCCeEEEe
Q 003742 84 PKQTYYLSMEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYG 163 (799)
Q Consensus 84 ~k~vyYlSmEfl~Gr~L~nnL~NLgi~~~~~eaL~~lg~~l~~i~~~E~D~~LgnGGLGrLAacfldS~A~LglP~~G~G 163 (799)
.+.++||||||+++.+|+ +||||||||||||||||||||+|++|||
T Consensus 85 ~~~~aYFs~E~gl~~~lp----------------------------------iYsGGLG~LAgd~lksasdLg~P~vgvG 130 (778)
T cd04299 85 PLVAAYFSMEFGLHESLP----------------------------------IYSGGLGILAGDHLKAASDLGLPLVGVG 130 (778)
T ss_pred CCeeEEeccccccCCCCC----------------------------------ccCchHHHHHHHHHHHHHhCCCCEEEEE
Confidence 355669999999999998 9999999999999999999999999999
Q ss_pred eccCCCcceEEec-CCceeeccccccccCCCcccccCCeeEEEEeCCeEEEcCCCceeeeCCeEEEEEEeeeccCCCCCC
Q 003742 164 LRYRYGLFKQKIT-KQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTK 242 (799)
Q Consensus 164 lrY~~G~F~Q~I~-dG~QvE~pd~Wl~~g~pwe~~r~~~~~~V~f~G~v~~~~~g~~~w~~~~~v~av~yd~pi~gy~~~ 242 (799)
|+|+||||+|.|+ ||||+|.|++|...+.||+..+ +.+|+ +.++ .+|+||+
T Consensus 131 llY~~GyF~Q~i~~dG~Q~e~~~~~~~~~~p~~~~~---------------~~~G~------~~~v----~v~l~g~--- 182 (778)
T cd04299 131 LLYRQGYFRQRLDADGWQQETYPVNDFEQLPLEPVR---------------DADGE------PVRV----SVELPGR--- 182 (778)
T ss_pred eCcCCCCeEEEECCCCceeecCCCcCCCCCceEEEe---------------cCCCC------eEEE----EEeeCCC---
Confidence 9999999999999 9999999999999999998621 34564 2233 4778997
Q ss_pred ceEEEEEEeeccCCccccccccCcchhhhHhhhhhhhhccccccccCCCcchhhhhhhhhhhhhhhchHHHHHHHHHHcc
Q 003742 243 NTISLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERK 322 (799)
Q Consensus 243 ~~n~lRLW~a~v~~~~~~l~~~~~g~y~~a~~~~~~~~~It~~LYp~D~~~~Gk~lRLkQEyfl~~a~lqdiir~~~~~~ 322 (799)
.+++|+|+++|+ .+++++||++.++ |...+|.||++|||+| +++||+||||||+||++.+ |++
T Consensus 183 -~v~~rvw~~~vg--~v~lylLDtd~~~----n~~~~R~iT~~LYg~D-----~~~Rl~Qe~~Lg~agl~~L-r~l---- 245 (778)
T cd04299 183 -TVYARVWKAQVG--RVPLYLLDTDIPE----NSPDDRGITDRLYGGD-----QETRIQQEILLGIGGVRAL-RAL---- 245 (778)
T ss_pred -ceEEEEEEEEcC--CCCEEEecCCccc----cchhhcccccCCCCCc-----HHHHHHHHHHHHHHHHHHH-HHh----
Confidence 679999999976 5889999999975 5677999999999998 5889999999999999765 442
Q ss_pred CCccccCCCCceeEEeCCCcccccHHHHHHHHHhhcCCCHHHHHHHhccceEeeecCCCcchhccccHHHHHHhchhHHH
Q 003742 323 SGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHME 402 (799)
Q Consensus 323 g~~~l~~l~~~~~ihlNdtHpalai~ElmR~L~de~gl~~~~A~~iv~~~~~yTnHT~~pealE~w~~~l~~~llpr~~~ 402 (799)
| + ++.+|||||+||||+++||||+||+++|++|++||++|+.+++||||||+|+|||+||.++|++++|+|++
T Consensus 246 g---~----~pdViH~ND~Haal~~lE~~R~ll~~~g~~~~~A~e~vr~~tvFTtHTpvpqG~d~Fp~~l~~~~~~~~~~ 318 (778)
T cd04299 246 G---I----KPTVYHMNEGHAAFLGLERIRELMAEGGLSFDEALEAVRASTVFTTHTPVPAGHDRFPPDLVERYFGPYAR 318 (778)
T ss_pred C---C----CCeEEEeCCCcHHHHHHHHHHHHHHHcCCCHHHHHHhhCCeEEEecCCchHHHhhhCCHHHHHHHhhHHHH
Confidence 2 2 46799999999999999999999999899999999999999999999999999999999999999998754
Q ss_pred HHHHHHHHHHHHHHHhCCCChhhhccccccccCCC-CCeeeEeeeccccCcchHHHHHHhHHHHHHhhhhhhhhhcCCC-
Q 003742 403 IIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPK-KPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNK- 480 (799)
Q Consensus 403 ii~~In~~f~~~~~~~~~~~~~~~~~l~ii~~~~~-~~~v~Ma~Lai~~S~~vNGVS~lH~ei~k~~~f~~f~~l~P~k- 480 (799)
.+|++++.+..++++.+ .+ .+.|+|++|||++|++|||||+||++|+|+ ||++|+..+|.+
T Consensus 319 ---------------~lgl~~~~~~~lg~e~~-~~~~~~~nM~~laL~~S~~vNgVS~lHg~vsr~-mf~~~~~g~p~~~ 381 (778)
T cd04299 319 ---------------ELGLSRDRFLALGRENP-GDDPEPFNMAVLALRLAQRANGVSRLHGEVSRE-MFAGLWPGFPVEE 381 (778)
T ss_pred ---------------HcCCCHHHHhhhccccc-cCccCceeHHHHHHHhcCeeeeecHHHHHHHHH-HhhhhhccCCccc
Confidence 47889999999998764 11 128999999999999999999999999996 899888888865
Q ss_pred --ccccccccCccccccccChhHHHHHHHhcCCcccccCcchHHhh--hccCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 003742 481 --LQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGL--RQFADNTELQAEWESAKMASKKHLADYIWRVT 556 (799)
Q Consensus 481 --f~niTNGV~~rrWl~~~np~L~~Li~~~ig~~~W~~d~~~l~~l--~~~~~D~~~~~~~~~vk~~nK~~L~~~i~~~~ 556 (799)
|++||||||+|||+ ||++.+||++++|+ +|.++++....+ ...++|+++ | ++|+++|++|+++|++++
T Consensus 382 ~~i~~ITNGVh~~~W~---~P~~~~l~~~~~g~-~w~~~~~~~~~~~~~~~i~d~~l---w-~~K~~~K~~L~~~v~~~~ 453 (778)
T cd04299 382 VPIGHVTNGVHVPTWV---APEMRELYDRYLGG-DWRERPTDPELWEAVDDIPDEEL---W-EVRQQLRRRLIEFVRRRL 453 (778)
T ss_pred CceeceeCCcchhhhc---CHHHHHHHHHhcCc-chhhccchHHHHhhhcCCCcHHH---H-HHHHHHHHHHHHHHHHHH
Confidence 99999999999999 79999999999995 999998754333 335788777 7 799999999999999886
Q ss_pred -----------------CCcCCCCceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCC
Q 003742 557 -----------------GVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATY 619 (799)
Q Consensus 557 -----------------g~~ldp~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y 619 (799)
+..+||++|||+||||||+|||++| +|++++||.+|++ ||. +|+||||||||||+|
T Consensus 454 ~~~~~~~g~~~~~~~~~~~~ldpd~ltigfarRfa~YKR~~L-il~dl~rl~~il~-~~~-----~pvQ~IfaGKAhP~d 526 (778)
T cd04299 454 RRQWLRRGASAEEIGEADDVLDPNVLTIGFARRFATYKRATL-LLRDPERLKRLLN-DPE-----RPVQFIFAGKAHPAD 526 (778)
T ss_pred HhhhhhcCCchhhhhhcCCccCCCccEEeeeecchhhhhHHH-HHHHHHHHHHHhh-CCC-----CCeEEEEEEecCccc
Confidence 5569999999999999999999999 9999999999997 543 699999999999999
Q ss_pred HHHHHHHHHHHHHhhhhcCCcccCCcceEEEecCCChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEecc
Q 003742 620 TNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLD 699 (799)
Q Consensus 620 ~~aK~iIk~I~~va~~in~Dp~~~~~lkVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlD 699 (799)
++||++||+|+++| +||++++ ||||+|||||++|++|+||||||+|+|+||+||||||||||||||+||+||+|
T Consensus 527 ~~gK~iIk~i~~~a----~~p~~~~--kVvfle~Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~NG~LnlSvlD 600 (778)
T cd04299 527 EPGKELIQEIVEFS----RRPEFRG--RIVFLEDYDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAALNGGLNLSVLD 600 (778)
T ss_pred hHHHHHHHHHHHHH----hCcCCCC--cEEEEcCCCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHcCCeeeeccc
Confidence 99999999999999 4999999 99999999999999999999999999999999999999999999999999999
Q ss_pred Ccchhhhhhccccchhhccc---------------------cccchhhhhhccCCCCCCCChHHHHHHHHHHcC--CCCC
Q 003742 700 GANVEIRQEIGEENFFLFGA---------------------VAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSG--AFGS 756 (799)
Q Consensus 700 GanvEi~e~vg~en~~iFg~---------------------~~~ev~~l~~~~~y~~~~~~~~i~~v~d~i~~g--~f~~ 756 (799)
|||.|..+. .|+|.||. .+++|+|+||+++.+++| ..|+++|+++|.+- .|+.
T Consensus 601 Gww~E~~~g---~nGwaig~~~~~~~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p-~~W~~~~k~sm~~~~p~fs~ 676 (778)
T cd04299 601 GWWDEGYDG---ENGWAIGDGDEYEDDEYQDAEEAEALYDLLENEVIPLFYDRDEGGYP-PGWVAMMKHSMATLGPRFSA 676 (778)
T ss_pred CccccccCC---CCceEeCCCccccChhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCC-HHHHHHHHHHHHhcccCCCH
Confidence 999999743 67777776 678999999998877788 78999999999984 5655
Q ss_pred C
Q 003742 757 Y 757 (799)
Q Consensus 757 ~ 757 (799)
.
T Consensus 677 ~ 677 (778)
T cd04299 677 E 677 (778)
T ss_pred H
Confidence 4
No 9
>TIGR02094 more_P_ylases alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.
Probab=100.00 E-value=3.1e-131 Score=1138.83 Aligned_cols=543 Identities=25% Similarity=0.397 Sum_probs=480.1
Q ss_pred EEEEEhhhccccchhHHhhccCcHHHHHHHHHHcCCChHHHHhhccccCCCCCCcccchhhhHhhhhccCCCeEEEeecc
Q 003742 87 TYYLSMEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRY 166 (799)
Q Consensus 87 vyYlSmEfl~Gr~L~nnL~NLgi~~~~~eaL~~lg~~l~~i~~~E~D~~LgnGGLGrLAacfldS~A~LglP~~G~GlrY 166 (799)
|+||||||+++.+|+ +||||||||||||||||||||+|++||||+|
T Consensus 1 ~ayf~~E~g~~~~~p----------------------------------~ysGGLG~LAgd~l~saa~l~~p~~g~gl~Y 46 (601)
T TIGR02094 1 VAYFSMEYGLHESLP----------------------------------IYSGGLGVLAGDHLKSASDLGLPLVAVGLLY 46 (601)
T ss_pred CeEEeeccccCCCCC----------------------------------ccCchHHHHHHHHHHHHHhCCCCeEEEEecc
Confidence 689999999999998 9999999999999999999999999999999
Q ss_pred CCCcceEEec-CCceeeccccccccCCCcccccCCeeEEEEeCCeEEEcCCCceeeeCCeEEEEEEeeeccCCCCCCceE
Q 003742 167 RYGLFKQKIT-KQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTI 245 (799)
Q Consensus 167 ~~G~F~Q~I~-dG~QvE~pd~Wl~~g~pwe~~r~~~~~~V~f~G~v~~~~~g~~~w~~~~~v~av~yd~pi~gy~~~~~n 245 (799)
+||||+|+|+ ||||+|.|++|+..+.||+.. .+.+|+ . ++|++||+|. ++
T Consensus 47 ~~Gyf~Q~i~~~g~Q~e~~~~~~~~~~p~~~~---------------~~~~g~-------~---~~~~v~i~g~----~~ 97 (601)
T TIGR02094 47 KQGYFRQRLDEDGWQQEAYPNNDFESLPIEKV---------------LDTDGK-------W---LKISVRIRGR----DV 97 (601)
T ss_pred CCCceeEEECCCCceeecCCccccCCCceEEE---------------ecCCCC-------e---EEEEEecCCc----EE
Confidence 9999999998 999999999999999999862 133554 3 5899999994 99
Q ss_pred EEEEEeeccCCccccccccCcchhhhHhhhhhhhhccccccccCCCcchhhhhhhhhhhhhhhchHHHHHHHHHHccCCc
Q 003742 246 SLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGR 325 (799)
Q Consensus 246 ~lRLW~a~v~~~~~~l~~~~~g~y~~a~~~~~~~~~It~~LYp~D~~~~Gk~lRLkQEyfl~~a~lqdiir~~~~~~g~~ 325 (799)
++|+|+++++ .+++++||++. ++|...+|.||++|||+| +++|++||||||+||+|++- + .+
T Consensus 98 ~~rlw~~~~~--~v~lylld~~~----~~n~~~~R~it~~LY~~D-----~~~R~~Qe~fl~~a~l~~l~-~---l~--- 159 (601)
T TIGR02094 98 YAKVWRVQVG--RVPLYLLDTNI----PENSEDDRWITGRLYGGD-----KEMRIAQEIVLGIGGVRALR-A---LG--- 159 (601)
T ss_pred EEEEEEEEeC--CCCEEEecCCC----cccchhhcCccCCCCCCC-----HHHHHHHHHHHHHHHHHHHH-H---cC---
Confidence 9999999964 58899999997 456788999999999998 58899999999999998762 1 22
Q ss_pred cccCCCCceeEEeCCCcccccHHHHHHHHHhhcCCCHHHHHHHhccceEeeecCCCcchhccccHHHHHHhchhHHHHHH
Q 003742 326 QWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIE 405 (799)
Q Consensus 326 ~l~~l~~~~~ihlNdtHpalai~ElmR~L~de~gl~~~~A~~iv~~~~~yTnHT~~pealE~w~~~l~~~llpr~~~ii~ 405 (799)
-++.+|||||+||||+++||||+|| +++++|++||++|+.+++||||||+|+|+|+||.++|+++||| ++++.
T Consensus 160 -----~~pdviH~ND~Htal~~~el~r~l~-~~~~~~~~a~~~~~~~~vfTiHt~~~qG~e~f~~~~~~~~~~~-~~~~~ 232 (601)
T TIGR02094 160 -----IDPDVYHLNEGHAAFVTLERIRELI-AQGLSFEEAWEAVRKSSLFTTHTPVPAGHDVFPEDLMRKYFGD-YAANL 232 (601)
T ss_pred -----CCceEEEeCCchHHHHHHHHHHHHH-HcCCCHHHHHHhcCCeEEEeCCCchHHHhhhcCHHHHHHHhhh-hhhHh
Confidence 1678999999999999999999999 7899999999999999999999999999999999999999999 45666
Q ss_pred HHHHHHHHHHHHhCCCChhhhccccccccCCCCCeeeEeeeccccCcchHHHHHHhHHHHHHhhhhhhhhhcCCC---cc
Q 003742 406 EIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNK---LQ 482 (799)
Q Consensus 406 ~In~~f~~~~~~~~~~~~~~~~~l~ii~~~~~~~~v~Ma~Lai~~S~~vNGVS~lH~ei~k~~~f~~f~~l~P~k---f~ 482 (799)
+|+.+++..+...++. ..++|+|++|||++|++|||||++|+++++ .||++|+.++|.+ |.
T Consensus 233 gl~~~~~~~~~~~~~~---------------~~~~vnm~~lai~~S~~vngVS~lh~~v~~-~l~~~l~~~~~~~~~~i~ 296 (601)
T TIGR02094 233 GLPREQLLALGRENPD---------------DPEPFNMTVLALRLSRIANGVSKLHGEVSR-KMWQFLYPGYEEEEVPIG 296 (601)
T ss_pred CCCHHHHHhhhhhccC---------------ccCceeHHHHHHHhCCeeeeecHHHHHHHH-HHHHhhhhhcccccCCcc
Confidence 6666555443322211 112899999999999999999999999998 7899999999987 99
Q ss_pred ccccccCccccccccChhHHHHHHHhcCCcccccCcchHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCc---
Q 003742 483 NKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVT--- 559 (799)
Q Consensus 483 niTNGV~~rrWl~~~np~L~~Li~~~ig~~~W~~d~~~l~~l~~~~~D~~~~~~~~~vk~~nK~~L~~~i~~~~g~~--- 559 (799)
+||||||+++|. ||.++.|+++++|+ +|.+++++++.|++. |....++++++|++||.+|+++|++++|+.
T Consensus 297 gItNGId~~~W~---~~~~~~l~~~y~~~-~w~~~~~~~~~~~~~--~~~~~~~l~~~K~~~K~~L~~~v~~~~~~~~~~ 370 (601)
T TIGR02094 297 YVTNGVHNPTWV---APELRDLYERYLGE-NWRELLADEELWEAI--DDIPDEELWEVHLKLKARLIDYIRRRLRERWLR 370 (601)
T ss_pred ceeCCccccccC---CHHHHHHHHHhCCc-chhccchhhhhhhhc--ccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 999999999999 79999999999995 899999998888864 333445555899999999999999988877
Q ss_pred --------------CCCCceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHH
Q 003742 560 --------------IDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRI 625 (799)
Q Consensus 560 --------------ldp~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~i 625 (799)
+||+++||+||||||+||||+| ||+++++|.+|++ ||. .|+||||+|||||+|.+||++
T Consensus 371 ~g~~~~~~~~~gl~~dpd~~~ig~v~Rl~~yKr~dL-il~~i~~l~~i~~-~~~-----~pvq~V~~Gka~p~d~~gk~~ 443 (601)
T TIGR02094 371 RGADAAILMATDRFLDPDVLTIGFARRFATYKRADL-IFRDLERLARILN-NPE-----RPVQIVFAGKAHPADGEGKEI 443 (601)
T ss_pred ccCcchhhhhhccccCCCCcEEEEEEcchhhhhHHH-HHHHHHHHHHHhh-CCC-----CCeEEEEEEecCcccchHHHH
Confidence 9999999999999999999999 9999999999997 543 699999999999999999999
Q ss_pred HHHHHHHhhhhcCCcccCCcceEEEecCCChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccCcchhh
Q 003742 626 VKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEI 705 (799)
Q Consensus 626 Ik~I~~va~~in~Dp~~~~~lkVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi 705 (799)
|++|+++| +||++.+ ||+|+||||+++|++|+||||||+|||++|+||||||+|||||||+|++||+||||+|.
T Consensus 444 i~~i~~la----~~~~~~~--kv~f~~~Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~nGgL~~sv~DG~~~E~ 517 (601)
T TIGR02094 444 IQRIVEFS----KRPEFRG--RIVFLENYDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMNGVLNLSILDGWWGEG 517 (601)
T ss_pred HHHHHHHH----hcccCCC--CEEEEcCCCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHcCCceeecccCccccc
Confidence 99999999 4999999 99999999999999999999999999999999999999999999999999999999998
Q ss_pred hhhccccchhhccc---------------------cccchhhhhhccCCCCCCCChHHHHHHHHHHcC--CCCC
Q 003742 706 RQEIGEENFFLFGA---------------------VAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSG--AFGS 756 (799)
Q Consensus 706 ~e~vg~en~~iFg~---------------------~~~ev~~l~~~~~y~~~~~~~~i~~v~d~i~~g--~f~~ 756 (799)
.+. .|+|.||. .+++|.++++++.-.+.| ..|+++|+++|.+. .|+.
T Consensus 518 ~~~---~nGf~f~~~~~~~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p-~~W~~~~k~am~~~~~~fsw 587 (601)
T TIGR02094 518 YDG---DNGWAIGDGEEYDDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIP-ADWVEMMKESIATIAPRFST 587 (601)
T ss_pred CCC---CcEEEECCCccccccccccCCCHHHHHHHHHHHHHHHHhcCCcccCc-HHHHHHHHHHHhccCCCCCH
Confidence 743 68888883 223455777765433445 68999999999986 5654
No 10
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=99.74 E-value=5.7e-17 Score=182.03 Aligned_cols=411 Identities=17% Similarity=0.174 Sum_probs=257.5
Q ss_pred ccccCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCCcceEEecCCceeeccccccccCCCcccccCCeeEEEEeCCe
Q 003742 131 EKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGS 210 (799)
Q Consensus 131 E~D~~LgnGGLGrLAacfldS~A~LglP~~G~GlrY~~G~F~Q~I~dG~QvE~pd~Wl~~g~pwe~~r~~~~~~V~f~G~ 210 (799)
|..|-.-.||||...++.-++|+.+|..+.-+.-+|....- .|.. .++. ...+.|.+.
T Consensus 8 E~~p~~k~GGl~~~~~~L~~aL~~~G~~V~Vi~p~y~~~~~--------------~~~~-----~~~~-~~~~~~~~~-- 65 (476)
T cd03791 8 EVAPFAKTGGLGDVVGALPKALAKLGHDVRVIMPKYGRILD--------------ELRG-----QLLV-LRLFGVPVG-- 65 (476)
T ss_pred cccccccCCcHHHHHHHHHHHHHHCCCeEEEEecCCcchhh--------------Hhcc-----CeEE-EEEEeeccC--
Confidence 33455589999999999999999999999999988876521 0000 0000 000111211
Q ss_pred EEEcCCCceeeeCCeEEEEEEeeeccCCCCCCceEEEEEEeeccCCccccccccCcchhhhHhhhhhhhhccccccccCC
Q 003742 211 VMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGD 290 (799)
Q Consensus 211 v~~~~~g~~~w~~~~~v~av~yd~pi~gy~~~~~n~lRLW~a~v~~~~~~l~~~~~g~y~~a~~~~~~~~~It~~LYp~D 290 (799)
+ .....++|...+. .++++.++...+.. +......+...|++
T Consensus 66 ---------------------------~----~~~~~~~~~~~~~--gv~~~~l~~~~~~~----~~~~~~~~~~~~~~- 107 (476)
T cd03791 66 ---------------------------G----RPEYVGVFELPVD--GVPVYFLDNPDYFD----RPGLYDDSGYDYED- 107 (476)
T ss_pred ---------------------------C----ceeEEEEEEEEeC--CceEEEEcChHHcC----CCCCCCccCCCCcc-
Confidence 1 1333445544432 23333443332221 11111123344432
Q ss_pred CcchhhhhhhhhhhhhhhchHHHHHHHHHHccCCccccCCCCceeEEeCCCcccccHHHHHHHHHhhcCCCHHHHHHHhc
Q 003742 291 STEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITT 370 (799)
Q Consensus 291 ~~~~Gk~lRLkQEyfl~~a~lqdiir~~~~~~g~~~l~~l~~~~~ihlNdtHpalai~ElmR~L~de~gl~~~~A~~iv~ 370 (799)
+..+..+|+.|+++ ++++ .+ .++.+||+||.|++++...+-+...+ . ...+
T Consensus 108 --------~~~~~~~f~~~~~~-~l~~---~~--------~~pDviH~hd~~t~~~~~~l~~~~~~-~--------~~~~ 158 (476)
T cd03791 108 --------NAERFALFSRAALE-LLRR---LG--------WKPDIIHCHDWHTGLVPALLKEKYAD-P--------FFKN 158 (476)
T ss_pred --------HHHHHHHHHHHHHH-HHHh---cC--------CCCcEEEECchHHHHHHHHHHHhhcc-c--------cCCC
Confidence 44455788888763 2222 11 24569999999998888765544321 0 1235
Q ss_pred cceEeeecCCCcchhccccHHHHHHhchhHHHHHHHHHHHHHHHHHHhCCCChhhhccccccccCCCCCeeeEeeecccc
Q 003742 371 RTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVS 450 (799)
Q Consensus 371 ~~~~yTnHT~~pealE~w~~~l~~~llpr~~~ii~~In~~f~~~~~~~~~~~~~~~~~l~ii~~~~~~~~v~Ma~Lai~~ 450 (799)
..++||.|++.+.+ .+|...+.... ..++....+.-.. ....++|...++..
T Consensus 159 ~~~v~tiH~~~~~g--~~~~~~~~~~~-----------------------~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 210 (476)
T cd03791 159 IKTVFTIHNLAYQG--VFPLEALEDLG-----------------------LPWEELFHIDGLE---FYGQVNFLKAGIVY 210 (476)
T ss_pred CCEEEEeCCCCCCC--CCCHHHHHHcC-----------------------CCccchhhhcccc---cCCcccHHHHHHHh
Confidence 57999999998877 46666554421 1110000111111 11278999999999
Q ss_pred CcchHHHHHHhHHHHHHhh----hhhhhhhcCCCccccccccCccccccccChhHHHHHHHhcCCcccccCcchHHhhhc
Q 003742 451 AHTVNGVAQLHSDILKADL----FADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQ 526 (799)
Q Consensus 451 S~~vNGVS~lH~ei~k~~~----f~~f~~l~P~kf~niTNGV~~rrWl~~~np~L~~Li~~~ig~~~W~~d~~~l~~l~~ 526 (799)
|..++.||..+.+.+.+.. +..+....+.|+..|+|||+...|-....+.+...++
T Consensus 211 ad~v~~vS~~~~~~i~~~~~~~gl~~~~~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~-------------------- 270 (476)
T cd03791 211 ADAVTTVSPTYAREILTPEFGEGLDGLLRARAGKLSGILNGIDYDVWNPATDPHLPANYS-------------------- 270 (476)
T ss_pred cCcCeecCHhHHHHhCCCCCCcchHHHHHhccCCeEEEeCCCcCcccCccccchhhhcCC--------------------
Confidence 9999999998887665321 0011122357899999999999998433333221111
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCC
Q 003742 527 FADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTP 606 (799)
Q Consensus 527 ~~~D~~~~~~~~~vk~~nK~~L~~~i~~~~g~~ldp~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P 606 (799)
. + .+ +.|..+|..|. ++.|...+++..+.+++-|+.++|+..+ ++..+.+. .+ .+
T Consensus 271 ---~-~---~~-~~~~~~k~~l~----~~~g~~~~~~~~~i~~vGrl~~~Kg~~~-li~a~~~l---~~---------~~ 325 (476)
T cd03791 271 ---A-D---DL-EGKAENKAALQ----EELGLPVDPDAPLFGFVGRLTEQKGIDL-LLEALPEL---LE---------LG 325 (476)
T ss_pred ---c-c---cc-ccHHHHHHHHH----HHcCCCcCCCCCEEEEEeeccccccHHH-HHHHHHHH---HH---------cC
Confidence 0 0 13 46667776654 5788888899999999999999999998 77766553 43 13
Q ss_pred eEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCCcccCCcceEEEecCCChhhhhhcccccccccccCCCccccCCCcccc
Q 003742 607 RTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMK 686 (799)
Q Consensus 607 ~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~~~~~lkVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK 686 (799)
.+|++.|+..| .+.+.+.++++.. .+ +|+|+..|+-.++..++.+||++...|. .|++|.+.|.
T Consensus 326 ~~lvi~G~g~~------~~~~~~~~~~~~~------~~--~v~~~~~~~~~~~~~~~~~aDv~l~pS~--~E~~gl~~lE 389 (476)
T cd03791 326 GQLVILGSGDP------EYEEALRELAARY------PG--RVAVLIGYDEALAHLIYAGADFFLMPSR--FEPCGLTQMY 389 (476)
T ss_pred cEEEEEecCCH------HHHHHHHHHHHhC------CC--cEEEEEeCCHHHHHHHHHhCCEEECCCC--CCCCcHHHHH
Confidence 78999998744 2233344444311 22 7999999999999999999999998776 6999999999
Q ss_pred eeccCceEEEeccCcchhhhhhccc----cchhhccc
Q 003742 687 FSLNGCLIIGTLDGANVEIRQEIGE----ENFFLFGA 719 (799)
Q Consensus 687 ~~lNGaltlgtlDGanvEi~e~vg~----en~~iFg~ 719 (799)
+|.+|.+.|+|--|...|+..+..+ .|+++|..
T Consensus 390 Ama~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~ 426 (476)
T cd03791 390 AMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVFEG 426 (476)
T ss_pred HhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEeCC
Confidence 9999999999988888777654311 17777764
No 11
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=99.65 E-value=3.2e-15 Score=169.01 Aligned_cols=402 Identities=17% Similarity=0.188 Sum_probs=250.4
Q ss_pred cCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCCcceEEecCCceeeccccccccCCCcccccCCeeEEEEeCCeEEE
Q 003742 134 AALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMV 213 (799)
Q Consensus 134 ~~LgnGGLGrLAacfldS~A~LglP~~G~GlrY~~G~F~Q~I~dG~QvE~pd~Wl~~g~pwe~~r~~~~~~V~f~G~v~~ 213 (799)
|-.-.||||.-.++.-++|+.+|.-+.-+.-+|.... + .|... ++ +.
T Consensus 12 P~~k~GGl~~~v~~L~~aL~~~G~~v~v~~p~y~~~~------~--------~~~~~-----~~-------~~------- 58 (473)
T TIGR02095 12 PFAKTGGLADVVGALPKALAALGHDVRVLLPAYGCIE------D--------EVDDQ-----VK-------VV------- 58 (473)
T ss_pred cccCcCcHHHHHHHHHHHHHHcCCeEEEEecCCcChh------h--------hhccC-----eE-------EE-------
Confidence 4456899999999999999999999998888887532 0 00000 00 00
Q ss_pred cCCCceeeeCCeEEEEEEeeeccCCCCCCceEEEEEEeeccCCccccccccCcchhhhHhhhhhhhhccccccccCCCcc
Q 003742 214 NPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTE 293 (799)
Q Consensus 214 ~~~g~~~w~~~~~v~av~yd~pi~gy~~~~~n~lRLW~a~v~~~~~~l~~~~~g~y~~a~~~~~~~~~It~~LYp~D~~~ 293 (799)
....+++.| ....+++|...++ .++++.++...|.+ +. ..||++|-
T Consensus 59 ----------------~~~~~~~~~----~~~~~~~~~~~~~--~v~~~~i~~~~~~~--------r~--~~~y~~~~-- 104 (473)
T TIGR02095 59 ----------------ELVDLSVGP----RTLYVKVFEGVVE--GVPVYFIDNPSLFD--------RP--GGIYGDDY-- 104 (473)
T ss_pred ----------------EEEEEeecC----ceeEEEEEEEEEC--CceEEEEECHHHcC--------CC--CCCCCCCC--
Confidence 011122222 2445566666543 34444454443221 10 24887421
Q ss_pred hhhhhhhhhhhhhhhchHHHHHHHHHHccCCccccCCCCceeEEeCCCcccccHHHHHHHHHhhcCCCHHHHHHHhccce
Q 003742 294 EGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTV 373 (799)
Q Consensus 294 ~Gk~lRLkQEyfl~~a~lqdiir~~~~~~g~~~l~~l~~~~~ihlNdtHpalai~ElmR~L~de~gl~~~~A~~iv~~~~ 373 (799)
.-.+.+-.+|+.|+++ ++++ .+ ..+.+||+||-|++++..-+ +... +.. +..+
T Consensus 105 ---~d~~~r~~~f~~a~~~-~~~~---~~--------~~~DiiH~hdw~~~~~~~~l-~~~~---~~~--------~~~~ 157 (473)
T TIGR02095 105 ---PDNAERFAFFSRAAAE-LLSG---LG--------WQPDVVHAHDWHTALVPALL-KAVY---RPN--------PIKT 157 (473)
T ss_pred ---CCHHHHHHHHHHHHHH-HHHh---cC--------CCCCEEEECCcHHHHHHHHH-Hhhc---cCC--------CCCE
Confidence 1123344678888763 3332 11 13459999999999877643 3222 100 3568
Q ss_pred EeeecCCCcchhccccHHHHHHhchhHHHHHHHHHHHHHHHHHHhCCCChhhhccccccccCCCCCeeeEeeeccccCcc
Q 003742 374 AYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHT 453 (799)
Q Consensus 374 ~yTnHT~~pealE~w~~~l~~~llpr~~~ii~~In~~f~~~~~~~~~~~~~~~~~l~ii~~~~~~~~v~Ma~Lai~~S~~ 453 (799)
+||.|++...| .+|...+..+ +.+.+.+.... .+. .+.++|...++..|..
T Consensus 158 v~TiH~~~~~g--~~~~~~~~~~-----------------------~~~~~~~~~~~-~~~---~~~~~~~k~~~~~ad~ 208 (473)
T TIGR02095 158 VFTIHNLAYQG--VFPADDFSEL-----------------------GLPPEYFHMEG-LEF---YGRVNFLKGGIVYADR 208 (473)
T ss_pred EEEcCCCccCC--cCCHHHHHHc-----------------------CCChHHcCchh-hhc---CCchHHHHHHHHhCCc
Confidence 99999987665 4666655431 11111110000 011 1167888888999999
Q ss_pred hHHHHHHhHHHHHHhhhh----hhhhhcCCCccccccccCccccccccChhHHHHHHHhcCCcccccCcchHHhhhccCC
Q 003742 454 VNGVAQLHSDILKADLFA----DYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFAD 529 (799)
Q Consensus 454 vNGVS~lH~ei~k~~~f~----~f~~l~P~kf~niTNGV~~rrWl~~~np~L~~Li~~~ig~~~W~~d~~~l~~l~~~~~ 529 (799)
++.||.-+.+-+.+..+. ......+.++.-|.|||+..+|- |.-... +.. .+. +
T Consensus 209 v~tVS~~~~~ei~~~~~~~~l~~~l~~~~~ki~~I~NGid~~~~~----p~~~~~----~~~-~~~------------~- 266 (473)
T TIGR02095 209 VTTVSPTYAREILTPEFGYGLDGVLKARSGKLRGILNGIDTEVWN----PATDPY----LKA-NYS------------A- 266 (473)
T ss_pred CeecCHhHHHHhcCCcCCccchhHHHhcCCCeEEEeCCCCccccC----CCCCcc----ccc-CcC------------c-
Confidence 999999877655422110 01122467899999999999996 432111 110 100 0
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEE
Q 003742 530 NTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTI 609 (799)
Q Consensus 530 D~~~~~~~~~vk~~nK~~L~~~i~~~~g~~ldp~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~ 609 (799)
+.| +-|..+|..| +++.|+..+++..+.+++-|+.++|...+ ++..+.++ ++ .+.++
T Consensus 267 -----~~~-~~k~~~k~~l----~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~-li~a~~~l---~~---------~~~~l 323 (473)
T TIGR02095 267 -----DDL-AGKAENKEAL----QEELGLPVDDDVPLFGVISRLTQQKGVDL-LLAALPEL---LE---------LGGQL 323 (473)
T ss_pred -----cch-hhhhhhHHHH----HHHcCCCccCCCCEEEEEecCccccChHH-HHHHHHHH---HH---------cCcEE
Confidence 013 3455555544 56788888889999999999999999998 77766554 43 13689
Q ss_pred EEeccCCCCCHHHHHHHHHHHHHhhhhcCCcccCCcceEEEecCCChhhhhhcccccccccccCCCccccCCCcccceec
Q 003742 610 MIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSL 689 (799)
Q Consensus 610 IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~~~~~lkVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~l 689 (799)
++.|+..|.+ . +.+.++++ +.+ + +|+|+..|+.+.+..++.+||+....|. .|.+|.+-|.+|.
T Consensus 324 vi~G~g~~~~--~----~~l~~~~~---~~~---~--~v~~~~~~~~~~~~~~~~~aDv~l~pS~--~E~~gl~~lEAma 387 (473)
T TIGR02095 324 VVLGTGDPEL--E----EALRELAE---RYP---G--NVRVIIGYDEALAHLIYAGADFILMPSR--FEPCGLTQLYAMR 387 (473)
T ss_pred EEECCCCHHH--H----HHHHHHHH---HCC---C--cEEEEEcCCHHHHHHHHHhCCEEEeCCC--cCCcHHHHHHHHH
Confidence 9999876432 2 23333332 111 2 6999999999999999999999999876 6999999999999
Q ss_pred cCceEEEeccCcchhhhhhc----cccchhhccc
Q 003742 690 NGCLIIGTLDGANVEIRQEI----GEENFFLFGA 719 (799)
Q Consensus 690 NGaltlgtlDGanvEi~e~v----g~en~~iFg~ 719 (799)
.|.+.|+|--|...|+.++. ...++|+|..
T Consensus 388 ~G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~~~ 421 (473)
T TIGR02095 388 YGTVPIVRRTGGLADTVVDGDPEAESGTGFLFEE 421 (473)
T ss_pred CCCCeEEccCCCccceEecCCCCCCCCceEEeCC
Confidence 99999999888777766543 1256777753
No 12
>PRK00654 glgA glycogen synthase; Provisional
Probab=99.56 E-value=8.8e-14 Score=157.60 Aligned_cols=307 Identities=18% Similarity=0.179 Sum_probs=195.5
Q ss_pred hhhhhhhhhhhhchHHHHHHHHHHccCCccccCCCCceeEEeCCCcccccHHHHHHHHHhhcCCCHHHHHHHhccceEee
Q 003742 297 LLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYT 376 (799)
Q Consensus 297 ~lRLkQEyfl~~a~lqdiir~~~~~~g~~~l~~l~~~~~ihlNdtHpalai~ElmR~L~de~gl~~~~A~~iv~~~~~yT 376 (799)
.+|+. ||+.|+++ .+++ .+ ..+.+||.||.|++++..-+-+.+ . .+ ..+-.++||
T Consensus 98 ~~r~~---~f~~~~~~-~~~~---~~--------~~pDiiH~h~w~~~~~~~~l~~~~-~-~~--------~~~~~~v~T 152 (466)
T PRK00654 98 GERFA---FFSWAAAE-FAEG---LD--------PRPDIVHAHDWHTGLIPALLKEKY-W-RG--------YPDIKTVFT 152 (466)
T ss_pred HHHHH---HHHHHHHH-HHHh---cC--------CCCceEEECCcHHHHHHHHHHHhh-h-cc--------CCCCCEEEE
Confidence 34555 88888773 2221 11 145699999999998777544332 1 11 123568999
Q ss_pred ecCCCcchhccccHHHHHHhchhHHHHHHHHHHHHHHHHHHhCCCChhhhccccccccCCCCCeeeEeeeccccCcchHH
Q 003742 377 NHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNG 456 (799)
Q Consensus 377 nHT~~pealE~w~~~l~~~llpr~~~ii~~In~~f~~~~~~~~~~~~~~~~~l~ii~~~~~~~~v~Ma~Lai~~S~~vNG 456 (799)
.|++...| .++.+.++.+ +.+.+.+. ....+. ...+++...++..|..|+.
T Consensus 153 iH~~~~~g--~~~~~~~~~~-----------------------~~~~~~~~-~~~~~~---~~~~~~~~~~~~~ad~vit 203 (466)
T PRK00654 153 IHNLAYQG--LFPAEILGEL-----------------------GLPAEAFH-LEGLEF---YGQISFLKAGLYYADRVTT 203 (466)
T ss_pred cCCCcCCC--cCCHHHHHHc-----------------------CCChHHcC-chhhhc---CCcccHHHHHHHhcCcCee
Confidence 99987655 4666665432 11111110 000000 0146777778999999999
Q ss_pred HHHHhHHHHHHhhhh----hhhhhcCCCccccccccCccccccccChhHHHHHHHhcCCcccccCcchHHhhhccCCCHH
Q 003742 457 VAQLHSDILKADLFA----DYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTE 532 (799)
Q Consensus 457 VS~lH~ei~k~~~f~----~f~~l~P~kf~niTNGV~~rrWl~~~np~L~~Li~~~ig~~~W~~d~~~l~~l~~~~~D~~ 532 (799)
||.-+.+-+++..+. .+....++|+.-|.|||+...|-...++.+.. ... .
T Consensus 204 vS~~~~~ei~~~~~~~gl~~~~~~~~~ki~vI~NGid~~~~~p~~~~~~~~----~~~------------------~--- 258 (466)
T PRK00654 204 VSPTYAREITTPEFGYGLEGLLRARSGKLSGILNGIDYDIWNPETDPLLAA----NYS------------------A--- 258 (466)
T ss_pred eCHHHHHHhccccCCcChHHHHHhcccCceEecCCCCccccCCccCccccc----ccC------------------h---
Confidence 999887655432221 12233467899999999999997322222211 111 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEe
Q 003742 533 LQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIG 612 (799)
Q Consensus 533 ~~~~~~~vk~~nK~~L~~~i~~~~g~~ldp~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFa 612 (799)
..| +-|..+|..| +++.|+. +++..+.+++-|+.+.|...+ ++..+.++ ++ .+.++++.
T Consensus 259 --~~~-~~k~~~k~~l----~~~~gl~-~~~~~~i~~vGRl~~~KG~~~-li~a~~~l---~~---------~~~~lviv 317 (466)
T PRK00654 259 --DDL-EGKAENKRAL----QERFGLP-DDDAPLFAMVSRLTEQKGLDL-VLEALPEL---LE---------QGGQLVLL 317 (466)
T ss_pred --hhh-hchHHHHHHH----HHHhCCC-CCCCcEEEEeeccccccChHH-HHHHHHHH---Hh---------cCCEEEEE
Confidence 013 3455566554 3466765 457888999999999999998 77766543 43 14578888
Q ss_pred ccCCCCCHHHHHHHHHHHHHhhhhcCCcccCCcceEEEecCCChhhhhhcccccccccccCCCccccCCCcccceeccCc
Q 003742 613 GKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGC 692 (799)
Q Consensus 613 GKAaP~y~~aK~iIk~I~~va~~in~Dp~~~~~lkVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGa 692 (799)
|...|. ..+.+.++++.. .+ +|+|+..|+-+++..++.+||+....|. .|.+|.+-|-||..|.
T Consensus 318 G~g~~~------~~~~l~~l~~~~------~~--~v~~~~g~~~~~~~~~~~~aDv~v~PS~--~E~~gl~~lEAma~G~ 381 (466)
T PRK00654 318 GTGDPE------LEEAFRALAARY------PG--KVGVQIGYDEALAHRIYAGADMFLMPSR--FEPCGLTQLYALRYGT 381 (466)
T ss_pred ecCcHH------HHHHHHHHHHHC------CC--cEEEEEeCCHHHHHHHHhhCCEEEeCCC--CCCchHHHHHHHHCCC
Confidence 875432 222333333322 12 5777788988889999999999999887 7999999999999999
Q ss_pred eEEEeccCcchhhhhhc----cccchhhccc
Q 003742 693 LIIGTLDGANVEIRQEI----GEENFFLFGA 719 (799)
Q Consensus 693 ltlgtlDGanvEi~e~v----g~en~~iFg~ 719 (799)
+.|.|--|.-.|+..+. +..++|+|..
T Consensus 382 p~V~~~~gG~~e~v~~~~~~~~~~~G~lv~~ 412 (466)
T PRK00654 382 LPIVRRTGGLADTVIDYNPEDGEATGFVFDD 412 (466)
T ss_pred CEEEeCCCCccceeecCCCCCCCCceEEeCC
Confidence 99999877766654432 2256788753
No 13
>PRK14098 glycogen synthase; Provisional
Probab=99.49 E-value=3.1e-13 Score=154.77 Aligned_cols=288 Identities=19% Similarity=0.226 Sum_probs=193.3
Q ss_pred CceeEEeCCCcccccHHHHHHHHHhhcCCCHHHHHHHhccceEeeecCCCcchhccccHHHHHHhchhHHHHHHHHHHHH
Q 003742 332 SKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRF 411 (799)
Q Consensus 332 ~~~~ihlNdtHpalai~ElmR~L~de~gl~~~~A~~iv~~~~~yTnHT~~pealE~w~~~l~~~llpr~~~ii~~In~~f 411 (799)
.+.+||+||-|++++.+ +++....... .+ .+-.++||.|++...| .||...+..++|..+
T Consensus 141 ~pDiiH~hdw~t~l~~~-~l~~~~~~~~-----~~--~~~~~V~TiHn~~~qg--~~~~~~~~~~~~~~~---------- 200 (489)
T PRK14098 141 KPDIIHCHDWYAGLVPL-LLKTVYADHE-----FF--KDIKTVLTIHNVYRQG--VLPFKVFQKLLPEEV---------- 200 (489)
T ss_pred CCCEEEecCcHHHHHHH-HHHHHhhhcc-----cc--CCCCEEEEcCCCcccC--CCCHHHHHHhCCHHh----------
Confidence 44699999999999877 4544332111 01 1346899999987766 477777766555321
Q ss_pred HHHHHHhCCCChhhhccccccccCCCCCeeeEeeeccccCcchHHHHHHhHHHHHHh-hh----hhhhhhcCCCcccccc
Q 003742 412 IAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKAD-LF----ADYVSLWPNKLQNKTN 486 (799)
Q Consensus 412 ~~~~~~~~~~~~~~~~~l~ii~~~~~~~~v~Ma~Lai~~S~~vNGVS~lH~ei~k~~-~f----~~f~~l~P~kf~niTN 486 (799)
... +... .+.+++-..++..|..|+.||.-..+-+++. .+ +..-...+.|+.-|.|
T Consensus 201 ~~~--------------~~~~-----~~~~n~lk~~i~~ad~VitVS~~~a~ei~~~~~~~~gl~~~l~~~~~kl~~I~N 261 (489)
T PRK14098 201 CSG--------------LHRE-----GDEVNMLYTGVEHADLLTTTSPRYAEEIAGDGEEAFGLDKVLEERKMRLHGILN 261 (489)
T ss_pred hhh--------------hhhc-----CCcccHHHHHHHhcCcceeeCHHHHHHhCcCCCCCcChHHHHHhcCCCeeEEeC
Confidence 000 0000 0168888889999999999999877655431 00 1111123678999999
Q ss_pred ccCccccccccChhHHHHHHHhcCCcccccCcchHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCcee
Q 003742 487 GITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLF 566 (799)
Q Consensus 487 GV~~rrWl~~~np~L~~Li~~~ig~~~W~~d~~~l~~l~~~~~D~~~~~~~~~vk~~nK~~L~~~i~~~~g~~ldp~slf 566 (799)
||....|- |.-...+.+..+ .+ .+ +-|..+|..| +++.|...||+...
T Consensus 262 GID~~~~~----p~~d~~~~~~~~------------------~~-----~~-~~k~~~k~~l----~~~lgl~~~~~~~~ 309 (489)
T PRK14098 262 GIDTRQWN----PSTDKLIKKRYS------------------IE-----RL-DGKLENKKAL----LEEVGLPFDEETPL 309 (489)
T ss_pred CccccccC----CcccccccccCC------------------cc-----hh-hhHHHHHHHH----HHHhCCCCccCCCE
Confidence 99999997 321111111111 11 13 4566777655 45789999999999
Q ss_pred eccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCCcccCCcc
Q 003742 567 DIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYL 646 (799)
Q Consensus 567 d~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~~~~~l 646 (799)
.+++-|+.++|...+ ++..+.++ ++ .+.+||+.|.. +. ..-+.+.++++.. | +
T Consensus 310 i~~vgRl~~~KG~d~-li~a~~~l---~~---------~~~~lvivG~G---~~---~~~~~l~~l~~~~---~---~-- 362 (489)
T PRK14098 310 VGVIINFDDFQGAEL-LAESLEKL---VE---------LDIQLVICGSG---DK---EYEKRFQDFAEEH---P---E-- 362 (489)
T ss_pred EEEeccccccCcHHH-HHHHHHHH---Hh---------cCcEEEEEeCC---CH---HHHHHHHHHHHHC---C---C--
Confidence 999999999999998 77776553 43 14689999863 22 1223333333311 1 3
Q ss_pred eEEEecCCChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccCcchhhhhhcc--ccchhhccc
Q 003742 647 KVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIG--EENFFLFGA 719 (799)
Q Consensus 647 kVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vg--~en~~iFg~ 719 (799)
+|.|+..|+-+.+..++.+||+...-|. .|++|.+-|-+|..|.+-|+|--|...|...++. ..++|+|..
T Consensus 363 ~V~~~g~~~~~~~~~~~a~aDi~l~PS~--~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~~~~~G~l~~~ 435 (489)
T PRK14098 363 QVSVQTEFTDAFFHLAIAGLDMLLMPGK--IESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDKGSGFIFHD 435 (489)
T ss_pred CEEEEEecCHHHHHHHHHhCCEEEeCCC--CCCchHHHHHHHhCCCCeEEecCCCCceeeecCCCCCCceeEeCC
Confidence 7999999999999999999999998776 7999999999999999889998888777665432 257788753
No 14
>PRK14099 glycogen synthase; Provisional
Probab=99.32 E-value=4.3e-11 Score=137.18 Aligned_cols=303 Identities=16% Similarity=0.140 Sum_probs=188.0
Q ss_pred hhhhhchHHHHHHHHHHccCCccccCCCCceeEEeCCCcccccHHHHHHHHHhhcCCCHHHHHHHhccceEeeecCCCcc
Q 003742 304 FFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPE 383 (799)
Q Consensus 304 yfl~~a~lqdiir~~~~~~g~~~l~~l~~~~~ihlNdtHpalai~ElmR~L~de~gl~~~~A~~iv~~~~~yTnHT~~pe 383 (799)
.||+-|++. +.+... .. -++.+||.||.|++++..- ++.. + ..+-.++||.|+..-.
T Consensus 115 ~~f~~a~~~-~~~~~~--------~~-~~pDIiH~Hdw~~~l~~~~-l~~~----~--------~~~~~~V~TiHn~~~q 171 (485)
T PRK14099 115 AALARAAAA-IGQGLV--------PG-FVPDIVHAHDWQAGLAPAY-LHYS----G--------RPAPGTVFTIHNLAFQ 171 (485)
T ss_pred HHHHHHHHH-HHhhhc--------cC-CCCCEEEECCcHHHHHHHH-HHhC----C--------CCCCCEEEeCCCCCCC
Confidence 488887763 332211 11 1346999999999987643 3310 0 0123489999999644
Q ss_pred hhccccHHHHHHhchhHHHHHHHHHHHHHHHHHHhCCCChhhhccccccccCCCCCeeeEeeeccccCcchHHHHHHhHH
Q 003742 384 ALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSD 463 (799)
Q Consensus 384 alE~w~~~l~~~llpr~~~ii~~In~~f~~~~~~~~~~~~~~~~~l~ii~~~~~~~~v~Ma~Lai~~S~~vNGVS~lH~e 463 (799)
+ .||..++..+ +.+.+.+...++... +.++|...++..|..|+.||.-+.+
T Consensus 172 g--~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~----~~~~~~k~~i~~ad~vitVS~~~a~ 222 (485)
T PRK14099 172 G--QFPRELLGAL-----------------------GLPPSAFSLDGVEYY----GGIGYLKAGLQLADRITTVSPTYAL 222 (485)
T ss_pred C--cCCHHHHHHc-----------------------CCChHHcCchhhhhC----CCccHHHHHHHhcCeeeecChhHHH
Confidence 3 4776665542 112111111111100 1466677788999999999998776
Q ss_pred HHHHhhh----hhhhhhcCCCccccccccCccccccccChhHHHHHHHhcCCcccccCcchHHhhhccCCCHHHHHHHHH
Q 003742 464 ILKADLF----ADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWES 539 (799)
Q Consensus 464 i~k~~~f----~~f~~l~P~kf~niTNGV~~rrWl~~~np~L~~Li~~~ig~~~W~~d~~~l~~l~~~~~D~~~~~~~~~ 539 (799)
-+++... .......++|+.-|.|||....|- |.-...+.... +. +.+ +
T Consensus 223 ei~~~~~g~gl~~~l~~~~~ki~vI~NGID~~~f~----p~~~~~~~~~~--------------------~~---~~~-~ 274 (485)
T PRK14099 223 EIQGPEAGMGLDGLLRQRADRLSGILNGIDTAVWN----PATDELIAATY--------------------DV---ETL-A 274 (485)
T ss_pred HHhcccCCcChHHHHHhhCCCeEEEecCCchhhcc----ccccchhhhcC--------------------Ch---hHH-H
Confidence 5543210 011223467899999999999997 33211111100 11 113 4
Q ss_pred HHHHHHHHHHHHHHHHhCCcCCCCceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCC
Q 003742 540 AKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATY 619 (799)
Q Consensus 540 vk~~nK~~L~~~i~~~~g~~ldp~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y 619 (799)
-|..+|..| +++.|...+|+.++.+++.|+.+.|...+ ++..+.+. .+ .+.++|+.|.. +
T Consensus 275 ~k~~~k~~l----~~~~gl~~~~~~~li~~VgRL~~~KG~d~-Li~A~~~l---~~---------~~~~lvivG~G---~ 334 (485)
T PRK14099 275 ARAANKAAL----QARFGLDPDPDALLLGVISRLSWQKGLDL-LLEALPTL---LG---------EGAQLALLGSG---D 334 (485)
T ss_pred hHHHhHHHH----HHHcCCCcccCCcEEEEEecCCccccHHH-HHHHHHHH---Hh---------cCcEEEEEecC---C
Confidence 666666655 55789888889999999999999999988 77766543 33 13478887763 2
Q ss_pred HHHHHHHHHHHHHhhhhcCCcccCCcceEEEecCCChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEecc
Q 003742 620 TNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLD 699 (799)
Q Consensus 620 ~~aK~iIk~I~~va~~in~Dp~~~~~lkVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlD 699 (799)
. .+-+.+.++++ ..| + +|+++-.|+-.+++.+..+||+...-|. .|.+|.+-|-||.-|.+-|.|--
T Consensus 335 ~---~~~~~l~~l~~---~~~---~--~v~~~~G~~~~l~~~~~a~aDifv~PS~--~E~fGl~~lEAma~G~ppVvs~~ 401 (485)
T PRK14099 335 A---ELEARFRAAAQ---AYP---G--QIGVVIGYDEALAHLIQAGADALLVPSR--FEPCGLTQLCALRYGAVPVVARV 401 (485)
T ss_pred H---HHHHHHHHHHH---HCC---C--CEEEEeCCCHHHHHHHHhcCCEEEECCc--cCCCcHHHHHHHHCCCCcEEeCC
Confidence 2 12223333332 112 2 5655567899999999899999998776 79999999999999976666666
Q ss_pred Ccchhhhhhc-------cccchhhccc
Q 003742 700 GANVEIRQEI-------GEENFFLFGA 719 (799)
Q Consensus 700 GanvEi~e~v-------g~en~~iFg~ 719 (799)
|.-.|+..+. |..++|+|..
T Consensus 402 GGl~d~V~~~~~~~~~~~~~~G~l~~~ 428 (485)
T PRK14099 402 GGLADTVVDANEMAIATGVATGVQFSP 428 (485)
T ss_pred CCccceeecccccccccCCCceEEeCC
Confidence 6655554332 3357888864
No 15
>PLN02939 transferase, transferring glycosyl groups
Probab=99.30 E-value=2e-10 Score=138.70 Aligned_cols=311 Identities=15% Similarity=0.197 Sum_probs=202.2
Q ss_pred hhhhhchHHHHHHHHHHccCCccccCCCCceeEEeCCCcccccHHHHHHHHHhhcCCCHHHHHHHhccceEeeecCCCcc
Q 003742 304 FFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPE 383 (799)
Q Consensus 304 yfl~~a~lqdiir~~~~~~g~~~l~~l~~~~~ihlNdtHpalai~ElmR~L~de~gl~~~~A~~iv~~~~~yTnHT~~pe 383 (799)
-||+-|++. +++. .+ ..+.+||+||-|.|++.|=+.+.... .++ ....++||.|...-.
T Consensus 594 ~~FsrAaLe-~~~~---~~--------~~PDIIH~HDW~TaLV~pll~~~y~~-~~~--------~~~ktVfTIHNl~yQ 652 (977)
T PLN02939 594 SYFSRAALE-LLYQ---SG--------KKPDIIHCHDWQTAFVAPLYWDLYAP-KGF--------NSARICFTCHNFEYQ 652 (977)
T ss_pred HHHHHHHHH-HHHh---cC--------CCCCEEEECCccHHHHHHHHHHHHhh-ccC--------CCCcEEEEeCCCcCC
Confidence 488888873 3322 11 13459999999999987755544332 121 223589999999766
Q ss_pred hhccccHHHHHHhchhHHHHHHHHHHHHHHHHHHhCCCChhhhccccccccCCCCCeeeEeeeccccCcchHHHHHHhHH
Q 003742 384 ALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSD 463 (799)
Q Consensus 384 alE~w~~~l~~~llpr~~~ii~~In~~f~~~~~~~~~~~~~~~~~l~ii~~~~~~~~v~Ma~Lai~~S~~vNGVS~lH~e 463 (799)
| .||.+.+.. .|.+++.+.+....+++ ..+.+++-..+++.|..|+-||.-+.+
T Consensus 653 G--~f~~~~l~~-----------------------lGL~~~~l~~~d~le~~-~~~~iN~LK~GIv~AD~VtTVSptYA~ 706 (977)
T PLN02939 653 G--TAPASDLAS-----------------------CGLDVHQLDRPDRMQDN-AHGRINVVKGAIVYSNIVTTVSPTYAQ 706 (977)
T ss_pred C--cCCHHHHHH-----------------------cCCCHHHccChhhhhhc-cCCchHHHHHHHHhCCeeEeeeHHHHH
Confidence 6 556655532 23333332211111110 012688888899999999999998877
Q ss_pred HHHHhhh---hhhhhhcCCCccccccccCccccccccChhHHHHHHHhcCCcccccCcchHHhhhccCCCHHHHHHHHHH
Q 003742 464 ILKADLF---ADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESA 540 (799)
Q Consensus 464 i~k~~~f---~~f~~l~P~kf~niTNGV~~rrWl~~~np~L~~Li~~~ig~~~W~~d~~~l~~l~~~~~D~~~~~~~~~v 540 (799)
-+.+.-. .......+.|+.-|-|||....|- |.-...|.... + ++| | +=
T Consensus 707 EI~te~G~GL~~~L~~~~~Kl~gIlNGID~e~wn----PatD~~L~~~Y-------s----------~~d------l-~G 758 (977)
T PLN02939 707 EVRSEGGRGLQDTLKFHSKKFVGILNGIDTDTWN----PSTDRFLKVQY-------N----------AND------L-QG 758 (977)
T ss_pred HHHHHhccchHHHhccccCCceEEecceehhhcC----Ccccccccccc-------C----------hhh------h-hh
Confidence 5543211 111234578899999999999997 44311111000 0 111 4 45
Q ss_pred HHHHHHHHHHHHHHHhCCcCC-CCceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCC
Q 003742 541 KMASKKHLADYIWRVTGVTID-PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATY 619 (799)
Q Consensus 541 k~~nK~~L~~~i~~~~g~~ld-p~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y 619 (799)
|..+|..| +++.|+.-+ |+..+.+++-|+++.|...+ ++..+.+. .+ ...+||++|.. |.-
T Consensus 759 K~~nK~aL----RkelGL~~~d~d~pLIg~VGRL~~QKGiDl-LleA~~~L---l~---------~dvqLVIvGdG-p~~ 820 (977)
T PLN02939 759 KAANKAAL----RKQLGLSSADASQPLVGCITRLVPQKGVHL-IRHAIYKT---AE---------LGGQFVLLGSS-PVP 820 (977)
T ss_pred hhhhhHHH----HHHhCCCcccccceEEEEeecCCcccChHH-HHHHHHHH---hh---------cCCEEEEEeCC-CcH
Confidence 66667654 557887754 78889999999999999998 77766543 32 13588998865 211
Q ss_pred HHHHHHHHHHHHHhhhhcCCcccCCcceEEEecCCChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEecc
Q 003742 620 TNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLD 699 (799)
Q Consensus 620 ~~aK~iIk~I~~va~~in~Dp~~~~~lkVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlD 699 (799)
.. -+.+..+++.+. ..+ +|.|+-.|+-.++..++.|||+-..-|+ .|.+|-+-|-||.-|.+.|.|--
T Consensus 821 ~~----e~eL~~La~~l~----l~d--rV~FlG~~de~lah~IYAaADIFLmPSr--~EPfGLvqLEAMAyGtPPVVs~v 888 (977)
T PLN02939 821 HI----QREFEGIADQFQ----SNN--NIRLILKYDEALSHSIYAASDMFIIPSM--FEPCGLTQMIAMRYGSVPIVRKT 888 (977)
T ss_pred HH----HHHHHHHHHHcC----CCC--eEEEEeccCHHHHHHHHHhCCEEEECCC--ccCCcHHHHHHHHCCCCEEEecC
Confidence 12 222333443221 234 7999999998899999999999999887 69999999999999999999888
Q ss_pred Ccchhhhhhcc-------ccchhhccc
Q 003742 700 GANVEIRQEIG-------EENFFLFGA 719 (799)
Q Consensus 700 GanvEi~e~vg-------~en~~iFg~ 719 (799)
|.-.|+..++. ..|+|+|..
T Consensus 889 GGL~DtV~d~d~e~i~~eg~NGfLf~~ 915 (977)
T PLN02939 889 GGLNDSVFDFDDETIPVELRNGFTFLT 915 (977)
T ss_pred CCCcceeecCCccccccCCCceEEecC
Confidence 87766655432 257888864
No 16
>PLN02316 synthase/transferase
Probab=98.55 E-value=7e-07 Score=109.98 Aligned_cols=210 Identities=20% Similarity=0.264 Sum_probs=139.1
Q ss_pred ccCcchHHHHHHhHHHHHHhhhhhhhhh--cCCCccccccccCccccccccChhHHHHHHHhcCCcccccCcchHHhhhc
Q 003742 449 VSAHTVNGVAQLHSDILKADLFADYVSL--WPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQ 526 (799)
Q Consensus 449 ~~S~~vNGVS~lH~ei~k~~~f~~f~~l--~P~kf~niTNGV~~rrWl~~~np~L~~Li~~~ig~~~W~~d~~~l~~l~~ 526 (799)
..|..|+.||.-..+-+... ..+ .++|+.-|.|||...+|- |.-...+.. .|.
T Consensus 760 ~~AD~ViTVS~tya~EI~~~-----~~l~~~~~Kl~vI~NGID~~~w~----P~tD~~lp~-----~y~----------- 814 (1036)
T PLN02316 760 AYADKATTVSPTYSREVSGN-----SAIAPHLYKFHGILNGIDPDIWD----PYNDNFIPV-----PYT----------- 814 (1036)
T ss_pred HHCCEEEeCCHHHHHHHHhc-----cCcccccCCEEEEECCccccccC----Ccccccccc-----cCC-----------
Confidence 35667777777544322211 122 247899999999999997 432111110 000
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCC
Q 003742 527 FADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTP 606 (799)
Q Consensus 527 ~~~D~~~~~~~~~vk~~nK~~L~~~i~~~~g~~ldp~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P 606 (799)
++| +.+-|..+|..| ++++|+. +++....+++-|+++.|-..+ ++..+.++ ++ .+
T Consensus 815 -~~~------~~~gK~~~k~~L----r~~lGL~-~~d~plVg~VGRL~~qKGvdl-Li~Al~~l---l~---------~~ 869 (1036)
T PLN02316 815 -SEN------VVEGKRAAKEAL----QQRLGLK-QADLPLVGIITRLTHQKGIHL-IKHAIWRT---LE---------RN 869 (1036)
T ss_pred -chh------hhhhhhhhHHHH----HHHhCCC-cccCeEEEEEeccccccCHHH-HHHHHHHH---hh---------cC
Confidence 011 112345555554 4577876 457889999999999999998 77766554 32 13
Q ss_pred eEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCCcccCCcceEEEecCCChhhhhhcccccccccccCCCccccCCCcccc
Q 003742 607 RTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMK 686 (799)
Q Consensus 607 ~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~~~~~lkVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK 686 (799)
.+||+.|-. |....-..+.++...+.. ...+ +|.|.-.|+-.++..++.|||+-.--|+ .|.||-+-|-
T Consensus 870 ~qlVIvG~G-pd~~~e~~l~~La~~Lg~------~~~~--rV~f~g~~de~lah~iyaaADiflmPS~--~EP~GLvqLE 938 (1036)
T PLN02316 870 GQVVLLGSA-PDPRIQNDFVNLANQLHS------SHHD--RARLCLTYDEPLSHLIYAGADFILVPSI--FEPCGLTQLT 938 (1036)
T ss_pred cEEEEEeCC-CCHHHHHHHHHHHHHhCc------cCCC--eEEEEecCCHHHHHHHHHhCcEEEeCCc--ccCccHHHHH
Confidence 578888854 433333444445444431 1223 7888888999999999999999997775 8999999999
Q ss_pred eeccCceEEEeccCcchhhhhhcc-----------ccchhhccc
Q 003742 687 FSLNGCLIIGTLDGANVEIRQEIG-----------EENFFLFGA 719 (799)
Q Consensus 687 ~~lNGaltlgtlDGanvEi~e~vg-----------~en~~iFg~ 719 (799)
||--|.+-|.|--|-..|+..++. ..|+|+|..
T Consensus 939 AMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~ 982 (1036)
T PLN02316 939 AMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDG 982 (1036)
T ss_pred HHHcCCCeEEEcCCCcHhhccccccccccccccccCCceEEeCC
Confidence 999999999998898877766541 257888854
No 17
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=97.80 E-value=8.9e-05 Score=85.72 Aligned_cols=334 Identities=19% Similarity=0.162 Sum_probs=209.6
Q ss_pred CceeEEeCCCcccccHHHHHHHHHhhcCCCHHHHHHHhccceEeeecCCCcchhccccHHHHHHhchhHHHHHHHHHHHH
Q 003742 332 SKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRF 411 (799)
Q Consensus 332 ~~~~ihlNdtHpalai~ElmR~L~de~gl~~~~A~~iv~~~~~yTnHT~~pealE~w~~~l~~~llpr~~~ii~~In~~f 411 (799)
.+.++|.||-|.+|+...+=... . ....-.++||-|+.-=.|+=. ...+..
T Consensus 130 ~pDIvH~hDWqt~L~~~~lk~~~---------~--~~~~i~tVfTIHNl~~qG~~~--~~~~~~---------------- 180 (487)
T COG0297 130 LPDIVHAHDWQTGLLPAYLKQRY---------R--SGYIIPTVFTIHNLAYQGLFR--LQYLEE---------------- 180 (487)
T ss_pred CCCEEEeecHHHHHHHHHHhhcc---------c--ccccCCeEEEEeeceeecccc--hhhHHH----------------
Confidence 44699999999999887543322 0 012445799999987666433 111111
Q ss_pred HHHHHHhCCCChhhhccccccccCCCCCeeeEeeeccccCcchHHHHHHhHHHHHHhhh----hhhhhhcCCCccccccc
Q 003742 412 IAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLF----ADYVSLWPNKLQNKTNG 487 (799)
Q Consensus 412 ~~~~~~~~~~~~~~~~~l~ii~~~~~~~~v~Ma~Lai~~S~~vNGVS~lH~ei~k~~~f----~~f~~l~P~kf~niTNG 487 (799)
.+++.+... +-..+- .+.+++-..+|..|..|+-||.-+.+=+...-+ .+.-.....+++.|-||
T Consensus 181 -------lgLp~~~~~-~~~l~~---~~~~~~lK~gi~~ad~vttVSptYa~Ei~t~~~g~gl~g~l~~~~~~l~GI~Ng 249 (487)
T COG0297 181 -------LGLPFEAYA-SFGLEF---YGQISFLKGGLYYADAVTTVSPTYAGEIYTPEYGEGLEGLLSWRSGKLSGILNG 249 (487)
T ss_pred -------hcCCHHHhh-hceeee---cCcchhhhhhheeccEEEEECHHHHHhhccccccccchhhhhhccccEEEEEee
Confidence 122221111 111110 126888889999999999999987663321111 12223335778889999
Q ss_pred cCccccccccChhHHHHHHHhcCCcccccCcchHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCceee
Q 003742 488 ITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFD 567 (799)
Q Consensus 488 V~~rrWl~~~np~L~~Li~~~ig~~~W~~d~~~l~~l~~~~~D~~~~~~~~~vk~~nK~~L~~~i~~~~g~~ldp~slfd 567 (799)
|..--|- |+-...+. .+ +-. +.|. .|.+||..|-+ +.|.+.+.+....
T Consensus 250 iD~~~wn----p~~d~~~~---------~~---------y~~-----~~~~-~k~~nk~~L~~----~~gL~~~~~~pl~ 297 (487)
T COG0297 250 IDYDLWN----PETDPYIA---------AN---------YSA-----EVLP-AKAENKVALQE----RLGLDVDLPGPLF 297 (487)
T ss_pred EEecccC----cccccchh---------cc---------CCc-----cchh-hhHHHHHHHHH----HhCCCCCCCCcEE
Confidence 9988886 33211111 00 100 1132 47888887766 7799999999999
Q ss_pred ccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCCcccCCcce
Q 003742 568 IQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLK 647 (799)
Q Consensus 568 ~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~~~~~lk 647 (799)
+++-|+.++|=-+| ++..++.. .+ ...|+|+=|.+-|.++.+ +..+++.+. + +
T Consensus 298 ~~vsRl~~QKG~dl-~~~~i~~~---l~---------~~~~~vilG~gd~~le~~------~~~la~~~~------~--~ 350 (487)
T COG0297 298 GFVSRLTAQKGLDL-LLEAIDEL---LE---------QGWQLVLLGTGDPELEEA------LRALASRHP------G--R 350 (487)
T ss_pred EEeeccccccchhH-HHHHHHHH---HH---------hCceEEEEecCcHHHHHH------HHHHHHhcC------c--e
Confidence 99999999999999 88888775 33 126899999996655543 455565443 2 7
Q ss_pred EEEecCCChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccCc----chhhhh--hccccchhhccccc
Q 003742 648 VVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGA----NVEIRQ--EIGEENFFLFGAVA 721 (799)
Q Consensus 648 VvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGa----nvEi~e--~vg~en~~iFg~~~ 721 (799)
|.+..-|+..+|++|..|||+|.-=|+ .|.||-+-|=+|.=|++=|-.-=|= .+...+ .-|..++|+|-...
T Consensus 351 ~~~~i~~~~~la~~i~agaD~~lmPSr--fEPcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f~~~~ 428 (487)
T COG0297 351 VLVVIGYDEPLAHLIYAGADVILMPSR--FEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLFLQTN 428 (487)
T ss_pred EEEEeeecHHHHHHHHhcCCEEEeCCc--CcCCcHHHHHHHHcCCcceEcccCCccceecCccchhccCceeEEEEecCC
Confidence 999999999999999999999996554 7999999999999999766554441 111111 13456777776552
Q ss_pred cchhhhhhc--cCCCCCCCCh--HHHHHHHHHHcCCCCCCC----cHHHHHHHhhC
Q 003742 722 EQVPKLRKE--REDGLFKPDP--RFEEAKQFIRSGAFGSYD----YNPLLDSLEGN 769 (799)
Q Consensus 722 ~ev~~l~~~--~~y~~~~~~~--~i~~v~d~i~~g~f~~~~----f~~i~~~l~~~ 769 (799)
...+... +.-.-+...+ |-+....++... |+... +.++|..++..
T Consensus 429 --~~~l~~al~rA~~~y~~~~~~w~~~~~~~m~~d-~sw~~sa~~y~~lY~~~~~~ 481 (487)
T COG0297 429 --PDHLANALRRALVLYRAPPLLWRKVQPNAMGAD-FSWDLSAKEYVELYKPLLSK 481 (487)
T ss_pred --HHHHHHHHHHHHHHhhCCHHHHHHHHHhhcccc-cCchhHHHHHHHHHHHHhcc
Confidence 2222111 1001122222 344455566544 43433 89999998863
No 18
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=97.41 E-value=0.0013 Score=77.26 Aligned_cols=208 Identities=19% Similarity=0.231 Sum_probs=140.8
Q ss_pred eeEeeeccccCcchHHHHHHhHHHHHHhhhhhhhhhcCCCccccccccCccccccccChhHHHHHHHhcCCcccccCcch
Q 003742 441 VRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDL 520 (799)
Q Consensus 441 v~Ma~Lai~~S~~vNGVS~lH~ei~k~~~f~~f~~l~P~kf~niTNGV~~rrWl~~~np~L~~Li~~~ig~~~W~~d~~~ 520 (799)
..|-..+...++.+-.||.. .+.. ...++..-|++ -+-|||.+..|-.
T Consensus 217 ~~iE~~aa~~Ad~fttVS~i----t~~E-~~~Ll~~~pd~--ViPNGid~~~f~~------------------------- 264 (590)
T cd03793 217 YCIERAAAHCAHVFTTVSEI----TAYE-AEHLLKRKPDV--VLPNGLNVKKFSA------------------------- 264 (590)
T ss_pred HHHHHHHHhhCCEEEECChH----HHHH-HHHHhCCCCCE--EeCCCcchhhccc-------------------------
Confidence 33445677788888899885 4322 33456677777 3459998876652
Q ss_pred HHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHh-C-CcCCCCceeecc-cccccc-chhhhhhhhhHHHHHHHHHhc
Q 003742 521 LVGLRQFADNTELQAEWESAKMASKKHLADYIWRVT-G-VTIDPNSLFDIQ-VKRIHE-YKRQLLNILGAIYRYKKLKEM 596 (799)
Q Consensus 521 l~~l~~~~~D~~~~~~~~~vk~~nK~~L~~~i~~~~-g-~~ldp~slfd~~-~kR~he-YKRq~Lnil~ii~~y~~i~~~ 596 (799)
.. ++...|...|+++.++++... | ..+||+..+..| +-|+.- -|=.++ ++.-+.|+++...
T Consensus 265 ---------~~----e~~~~~~~~k~ki~~f~~~~~~~~~~~~~d~tli~f~~GR~e~~nKGiDv-lIeAl~rLn~~l~- 329 (590)
T cd03793 265 ---------LH----EFQNLHAQSKEKINEFVRGHFYGHYDFDLDKTLYFFTAGRYEFSNKGADM-FLEALARLNYLLK- 329 (590)
T ss_pred ---------ch----hhhhhhHHhhhhhhHHHHHHHhhhcCCCCCCeEEEEEeeccccccCCHHH-HHHHHHHHHHHHH-
Confidence 11 145788999999999875432 3 357888777777 799965 688888 8888888887665
Q ss_pred CcCCCCCCCCeE-EEEeccCC-------CCCHHHHHHHHHHHHHhhhhcCC-----------------------------
Q 003742 597 SPQERKKTTPRT-IMIGGKAF-------ATYTNAKRIVKLVNDVGEVVNTD----------------------------- 639 (799)
Q Consensus 597 ~~~~~~~~~P~~-~IFaGKAa-------P~y~~aK~iIk~I~~va~~in~D----------------------------- 639 (799)
.... +.+=+. +||-+|.. -|...-|++-.-+.++.++|.+.
T Consensus 330 ~~~~--~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~ 407 (590)
T cd03793 330 VEGS--DTTVVAFFIMPAKTNNFNVESLKGQAVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRI 407 (590)
T ss_pred hcCC--CCeEEEEEEecCccCCcCHHhhcchHHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHH
Confidence 2221 222233 35777644 24455555555555554443332
Q ss_pred ---------c-------------------------ccCCcceEEEecCC--------ChhhhhhcccccccccccCCCcc
Q 003742 640 ---------P-------------------------EVNSYLKVVFVPNY--------NVSVAELLIPGSELSQHISTAGM 677 (799)
Q Consensus 640 ---------p-------------------------~~~~~lkVvFlenY--------~vslAe~lipa~Dv~~qis~ag~ 677 (799)
| .-.++.||||.|.| +++. +-++.|||+..--|..
T Consensus 408 ~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~drVkvif~P~~L~~~~~~~g~~y-~E~~~g~dl~v~PS~y-- 484 (590)
T cd03793 408 FALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPEDRVKVVFHPEFLSSTNPLLGLDY-EEFVRGCHLGVFPSYY-- 484 (590)
T ss_pred HhhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCCCeEEEEEcccccCCCCCcCCcch-HHHhhhceEEEecccc--
Confidence 2 12568999999998 5543 4458999999988876
Q ss_pred ccCCCcccceeccCceEEEeccC
Q 003742 678 EASGTSNMKFSLNGCLIIGTLDG 700 (799)
Q Consensus 678 EASGTsnMK~~lNGaltlgtlDG 700 (799)
|.-|---+-+|.-|.+.|.|--+
T Consensus 485 E~fG~~~lEAma~G~PvI~t~~~ 507 (590)
T cd03793 485 EPWGYTPAECTVMGIPSITTNLS 507 (590)
T ss_pred CCCCcHHHHHHHcCCCEEEccCc
Confidence 88999999999999999999553
No 19
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=97.21 E-value=0.00025 Score=74.92 Aligned_cols=213 Identities=14% Similarity=0.181 Sum_probs=111.3
Q ss_pred CCCCCcccchhhhHhhhhccCCCeEEEeeccCCCcceEEecCCceeeccccccccCCCcccccCCeeEEEEeCCeEEEcC
Q 003742 136 LGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNP 215 (799)
Q Consensus 136 LgnGGLGrLAacfldS~A~LglP~~G~GlrY~~G~F~Q~I~dG~QvE~pd~Wl~~g~pwe~~r~~~~~~V~f~G~v~~~~ 215 (799)
.-.||||..++..-++++.+|..+.-+--+|.. + +....+...+. + ..+.+.|
T Consensus 13 ~k~GGLgdv~~~L~kaL~~~G~~V~Vi~P~y~~-~-~~~~~~~~~~~--~-----------------~~~~~~~------ 65 (245)
T PF08323_consen 13 AKVGGLGDVVGSLPKALAKQGHDVRVIMPKYGF-I-DEEYFQLEPVR--R-----------------LSVPFGG------ 65 (245)
T ss_dssp B-SSHHHHHHHHHHHHHHHTT-EEEEEEE-THH-H-HHHCTTEEEEE--E-----------------ES-STTC------
T ss_pred cccCcHhHHHHHHHHHHHhcCCeEEEEEccchh-h-hhhhhcceEEE--E-----------------ecccccc------
Confidence 678999999999999999999999988888822 2 11110000000 0 0000111
Q ss_pred CCceeeeCCeEEEEEEeeeccCCCCCCceEEEEEEeeccCCccccccccCcchhhhHhhhhhhhhccccccccCC-Ccch
Q 003742 216 NGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGD-STEE 294 (799)
Q Consensus 216 ~g~~~w~~~~~v~av~yd~pi~gy~~~~~n~lRLW~a~v~~~~~~l~~~~~g~y~~a~~~~~~~~~It~~LYp~D-~~~~ 294 (799)
. ++.+. . ..+++|+.... .++.+.++...|.+ ...+|++. ..+.
T Consensus 66 ----------~---v~~~~-~--------~~~~v~~~~~~--~v~v~~i~~~~~f~-----------r~~iY~~~~~~~~ 110 (245)
T PF08323_consen 66 ----------P---VPVGV-W--------YEVRVYRYPVD--GVPVYFIDNPEYFD-----------RPGIYGDNGGDYP 110 (245)
T ss_dssp ----------E---EEEE-------------EEEEEEEET--TEEEEEEESHHHHG-----------SSSSSBSTSSBHT
T ss_pred ----------c---ccccc-c--------eEEEEEEEEcC--CccEEEecChhhcc-----------ccceeccCCCcch
Confidence 0 11111 0 23456666533 45555555554432 12288651 1111
Q ss_pred hhhhhhhhhhhhhhchHHHHHHHHHHccCCccccCC-CCceeEEeCCCcccccHHHHHHHHHhhcCCCHHHHHHHhccce
Q 003742 295 GKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEF-PSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTV 373 (799)
Q Consensus 295 Gk~lRLkQEyfl~~a~lqdiir~~~~~~g~~~l~~l-~~~~~ihlNdtHpalai~ElmR~L~de~gl~~~~A~~iv~~~~ 373 (799)
....|.. ||+.|++. + +..+ ..+.+||+||-|.|++.+.+ |....+ +..+ ....+
T Consensus 111 d~~~rf~---~fs~a~le-~------------~~~l~~~pDIIH~hDW~tal~p~~l-k~~~~~-----~~~~--~~~~~ 166 (245)
T PF08323_consen 111 DNAERFA---FFSRAALE-L------------LKKLGWKPDIIHCHDWHTALAPLYL-KERYQQ-----DPFF--ANIPT 166 (245)
T ss_dssp THHHHHH---HHHHHHHH-H------------HCTCT-S-SEEEEECGGGTTHHHHH-HHCCSS-------------SEE
T ss_pred hHHHHHH---HHHHHHHH-H------------HHhhCCCCCEEEecCchHHHHHHHh-cccccc-----cccc--cccee
Confidence 1244544 78877662 1 2222 14569999999999998754 333211 1111 25678
Q ss_pred EeeecCCCcchhccccHHHHHHhchhHHHHHHHHHHHHHHHHHHhCCCChhhhccccccccCCCCCeeeEeeeccccCcc
Q 003742 374 AYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHT 453 (799)
Q Consensus 374 ~yTnHT~~pealE~w~~~l~~~llpr~~~ii~~In~~f~~~~~~~~~~~~~~~~~l~ii~~~~~~~~v~Ma~Lai~~S~~ 453 (799)
+||.|.+.-.| .||.+.+. .++++++.+..+.-.+. .+.++|-..||..|..
T Consensus 167 v~TIHN~~yqg--~~~~~~~~-----------------------~~gl~~~~~~~~~~~~~---~~~in~lk~gi~~AD~ 218 (245)
T PF08323_consen 167 VFTIHNLEYQG--IFPPEDLK-----------------------ALGLPDEYFQNLDEYEF---YGQINFLKAGIVYADK 218 (245)
T ss_dssp EEEESSTT-----EEEGGGGG-----------------------CTT-GGGGS-STTTTEE---TTEEEHHHHHHHHSSE
T ss_pred EEEEcccccCC--cCCHHHHH-----------------------HcCCCHHHhcccccccc---ccccCHHHHHHHhcCE
Confidence 99999976665 33433321 23444433333333322 2389999999999999
Q ss_pred hHHHHHHhH
Q 003742 454 VNGVAQLHS 462 (799)
Q Consensus 454 vNGVS~lH~ 462 (799)
||-||.-..
T Consensus 219 v~TVS~~Ya 227 (245)
T PF08323_consen 219 VTTVSPTYA 227 (245)
T ss_dssp EEESSHHHH
T ss_pred eeeCCHHHH
Confidence 999999653
No 20
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=96.49 E-value=0.0046 Score=59.84 Aligned_cols=131 Identities=22% Similarity=0.260 Sum_probs=92.4
Q ss_pred cCCCCceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcC
Q 003742 559 TIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNT 638 (799)
Q Consensus 559 ~ldp~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~ 638 (799)
..+.+..+++++-|+..+|+..+ ++..+.++.+=+. ....+++.| .....+.+..++....
T Consensus 10 ~~~~~~~~il~~g~~~~~K~~~~-li~a~~~l~~~~~---------~~~~l~i~G----~~~~~~~~~~~~~~~~----- 70 (172)
T PF00534_consen 10 KIPDKKKIILFIGRLDPEKGIDL-LIEAFKKLKEKKN---------PNYKLVIVG----DGEYKKELKNLIEKLN----- 70 (172)
T ss_dssp TT-TTSEEEEEESESSGGGTHHH-HHHHHHHHHHHHH---------TTEEEEEES----HCCHHHHHHHHHHHTT-----
T ss_pred CCCCCCeEEEEEecCccccCHHH-HHHHHHHHHhhcC---------CCeEEEEEc----cccccccccccccccc-----
Confidence 45577899999999999999999 8888777644222 356899999 2222233333333322
Q ss_pred CcccCCcceEEEecCCChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccCcchhhhhhccccchhhc
Q 003742 639 DPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLF 717 (799)
Q Consensus 639 Dp~~~~~lkVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vg~en~~iF 717 (799)
+.. +|.|+....-.-...++..||+....|+. |..|++-+-+|..|.+.|+|--|..-|+..+. .++++|
T Consensus 71 ---~~~--~i~~~~~~~~~~l~~~~~~~di~v~~s~~--e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~--~~g~~~ 140 (172)
T PF00534_consen 71 ---LKE--NIIFLGYVPDDELDELYKSSDIFVSPSRN--EGFGLSLLEAMACGCPVIASDIGGNNEIINDG--VNGFLF 140 (172)
T ss_dssp ---CGT--TEEEEESHSHHHHHHHHHHTSEEEE-BSS--BSS-HHHHHHHHTT-EEEEESSTHHHHHSGTT--TSEEEE
T ss_pred ---ccc--cccccccccccccccccccceeccccccc--cccccccccccccccceeeccccCCceeeccc--cceEEe
Confidence 222 58888876655666778889999999998 99999999999999999999888887777664 344555
No 21
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=96.36 E-value=0.011 Score=64.47 Aligned_cols=148 Identities=17% Similarity=0.187 Sum_probs=101.2
Q ss_pred CCCCceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCC
Q 003742 560 IDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTD 639 (799)
Q Consensus 560 ldp~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~D 639 (799)
..++..+.+++-|+.+.|.+.+ ++..+.++ +...+ ...+.++++.|...+.....-.....+.+.++..
T Consensus 207 ~~~~~~~i~~~grl~~~Kg~~~-ll~a~~~l---~~~~~----~~~~~~l~i~G~~~~~~~~~~~~~~~l~~~~~~~--- 275 (392)
T cd03805 207 PKSGKKTFLSINRFERKKNIAL-AIEAFAIL---KDKLA----EFKNVRLVIAGGYDPRVAENVEYLEELQRLAEEL--- 275 (392)
T ss_pred cCCCceEEEEEeeecccCChHH-HHHHHHHH---Hhhcc----cccCeEEEEEcCCCCCCchhHHHHHHHHHHHHHh---
Confidence 3456788999999999999998 77776664 43010 0135789999977665444434444444444310
Q ss_pred cccCCcceEEEecCCChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccCcchhhhhhccccchhhccc
Q 003742 640 PEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGA 719 (799)
Q Consensus 640 p~~~~~lkVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vg~en~~iFg~ 719 (799)
..+.+ +|.|+....-.....++.+||+....|. .|..|.+-+-+|..|.+.|+|--|...|+... ..+++++..
T Consensus 276 ~~l~~--~V~f~g~~~~~~~~~~l~~ad~~l~~s~--~E~~g~~~lEAma~G~PvI~s~~~~~~e~i~~--~~~g~~~~~ 349 (392)
T cd03805 276 LLLED--QVIFLPSISDSQKELLLSSARALLYTPS--NEHFGIVPLEAMYAGKPVIACNSGGPLETVVD--GETGFLCEP 349 (392)
T ss_pred cCCCc--eEEEeCCCChHHHHHHHhhCeEEEECCC--cCCCCchHHHHHHcCCCEEEECCCCcHHHhcc--CCceEEeCC
Confidence 23344 8999988766655678899999887665 59899999999999999999977777666553 245666644
Q ss_pred cccch
Q 003742 720 VAEQV 724 (799)
Q Consensus 720 ~~~ev 724 (799)
+.+++
T Consensus 350 ~~~~~ 354 (392)
T cd03805 350 TPEEF 354 (392)
T ss_pred CHHHH
Confidence 44444
No 22
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=96.32 E-value=0.015 Score=63.37 Aligned_cols=133 Identities=18% Similarity=0.188 Sum_probs=92.4
Q ss_pred CCCCceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCC
Q 003742 560 IDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTD 639 (799)
Q Consensus 560 ldp~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~D 639 (799)
++++....+++-|+.++|...+ ++..+.++ .. +.++++.|..........++.+++..+.. .
T Consensus 197 ~~~~~~~i~~~Grl~~~Kg~~~-li~a~~~l---~~----------~~~l~i~g~g~~~~~~~~~~~~~~~~~~~----~ 258 (388)
T TIGR02149 197 IDRSRPYILFVGRITRQKGVPH-LLDAVHYI---PK----------DVQVVLCAGAPDTPEVAEEVRQAVALLDR----N 258 (388)
T ss_pred CCCCceEEEEEcccccccCHHH-HHHHHHHH---hh----------cCcEEEEeCCCCcHHHHHHHHHHHHHhcc----c
Confidence 4567778889999999999887 76655443 21 23566655444344444555555554431 0
Q ss_pred cccCCcceEEEecC-CChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccCcchhhhhhccccchhhcc
Q 003742 640 PEVNSYLKVVFVPN-YNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFG 718 (799)
Q Consensus 640 p~~~~~lkVvFlen-Y~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vg~en~~iFg 718 (799)
.+ +|+|+.. +.-+-...++.+||+-...|. .|..|.+-+-+|.-|.+.|+|-.|...|+.++ ..+++++.
T Consensus 259 ---~~--~v~~~~~~~~~~~~~~~~~~aDv~v~ps~--~e~~g~~~lEA~a~G~PvI~s~~~~~~e~i~~--~~~G~~~~ 329 (388)
T TIGR02149 259 ---RT--GIIWINKMLPKEELVELLSNAEVFVCPSI--YEPLGIVNLEAMACGTPVVASATGGIPEVVVD--GETGFLVP 329 (388)
T ss_pred ---cC--ceEEecCCCCHHHHHHHHHhCCEEEeCCc--cCCCChHHHHHHHcCCCEEEeCCCCHHHHhhC--CCceEEcC
Confidence 11 4787754 566667888899999987765 59999999999999999999988888777664 25666664
Q ss_pred c
Q 003742 719 A 719 (799)
Q Consensus 719 ~ 719 (799)
.
T Consensus 330 ~ 330 (388)
T TIGR02149 330 P 330 (388)
T ss_pred C
Confidence 3
No 23
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=96.20 E-value=0.025 Score=64.95 Aligned_cols=122 Identities=15% Similarity=0.086 Sum_probs=90.2
Q ss_pred CCceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCCcc
Q 003742 562 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 641 (799)
Q Consensus 562 p~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~ 641 (799)
++...++++-|+...|.... +++.+.. +++ . ....++++.|.........+++-+++.+..
T Consensus 291 ~~~~~i~~vGrl~~~Kg~~~-li~a~~~---l~~-~------~p~~~l~IvG~g~~~~~~~~e~~~li~~l~-------- 351 (475)
T cd03813 291 KEPPVVGLIGRVVPIKDIKT-FIRAAAI---VRK-K------IPDAEGWVIGPTDEDPEYAEECRELVESLG-------- 351 (475)
T ss_pred CCCcEEEEEeccccccCHHH-HHHHHHH---HHH-h------CCCeEEEEECCCCcChHHHHHHHHHHHHhC--------
Confidence 55778999999999999887 6665544 343 1 134688898876544455666666665543
Q ss_pred cCCcceEEEecCCChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccCcchhhhhhc
Q 003742 642 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEI 709 (799)
Q Consensus 642 ~~~~lkVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~v 709 (799)
+.+ +|.|+. ...+. .+++++|+-...|. .|+.|+.-+=+|.-|.+.|+|--|..-|+.++.
T Consensus 352 l~~--~V~f~G--~~~v~-~~l~~aDv~vlpS~--~Eg~p~~vlEAma~G~PVVatd~g~~~elv~~~ 412 (475)
T cd03813 352 LED--NVKFTG--FQNVK-EYLPKLDVLVLTSI--SEGQPLVILEAMAAGIPVVATDVGSCRELIEGA 412 (475)
T ss_pred CCC--eEEEcC--CccHH-HHHHhCCEEEeCch--hhcCChHHHHHHHcCCCEEECCCCChHHHhcCC
Confidence 233 788988 44454 45689999998776 599999999999999999999888888877764
No 24
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=96.14 E-value=0.0068 Score=59.28 Aligned_cols=119 Identities=18% Similarity=0.137 Sum_probs=87.3
Q ss_pred cccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCCcccCCcceE
Q 003742 569 QVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKV 648 (799)
Q Consensus 569 ~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~~~~~lkV 648 (799)
++-|+..+|...+ ++..+.+. .. .....+++|.|+..+.+...+.+. . ....+ +|
T Consensus 109 ~~g~~~~~k~~~~-~~~a~~~l---~~-------~~~~~~~~i~G~~~~~~~~~~~~~----~--------~~~~~--~v 163 (229)
T cd01635 109 FVGRLAPEKGLDD-LIEAFALL---KE-------RGPDLKLVIAGDGPEREYLEELLA----A--------LLLLD--RV 163 (229)
T ss_pred EEEeecccCCHHH-HHHHHHHH---HH-------hCCCeEEEEEeCCCChHHHHHHHH----h--------cCCcc--cE
Confidence 7888999998887 65555544 32 013579999999988776665511 1 11223 79
Q ss_pred EEecCC-ChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccCcchhhhhhccccchhh
Q 003742 649 VFVPNY-NVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFL 716 (799)
Q Consensus 649 vFlenY-~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vg~en~~i 716 (799)
.|++.+ ..+..+.+..+||+....|+. |+.|++-+-+|.-|.+.|+|-+|+.-|+.++ .+++|+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~di~l~~~~~--e~~~~~~~Eam~~g~pvi~s~~~~~~e~i~~--~~~g~~ 228 (229)
T cd01635 164 IFLGGLDPEELLALLLAAADVFVLPSLR--EGFGLVVLEAMACGLPVIATDVGGPPEIVED--GLTGLL 228 (229)
T ss_pred EEeCCCCcHHHHHHHhhcCCEEEecccc--cCcChHHHHHHhCCCCEEEcCCCCcceEEEC--CCceEE
Confidence 999987 667778888889999987765 5999999999999999999999999776443 244444
No 25
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=96.13 E-value=0.18 Score=58.19 Aligned_cols=132 Identities=13% Similarity=0.059 Sum_probs=82.3
Q ss_pred CCceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCC-HHHHHHHHHHHHHhhhhcCCc
Q 003742 562 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATY-TNAKRIVKLVNDVGEVVNTDP 640 (799)
Q Consensus 562 p~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y-~~aK~iIk~I~~va~~in~Dp 640 (799)
++..+++++-|+...|...+ ++....++ ++. +|+.+ ..++++..|-..-++ ..-.++.+.+.+++..+|..-
T Consensus 262 ~~~~~il~vgRl~~~Kgi~~-ll~A~~~l--l~~-~p~~~---~~v~Lv~vg~~~~g~~~~~~~l~~~l~~~v~~in~~~ 334 (460)
T cd03788 262 GGRKLIVGVDRLDYSKGIPE-RLLAFERL--LER-YPEWR---GKVVLVQIAVPSRTDVPEYQELRREVEELVGRINGKF 334 (460)
T ss_pred CCCEEEEEecCccccCCHHH-HHHHHHHH--HHh-Chhhc---CCEEEEEEccCCCcCcHHHHHHHHHHHHHHHHHHhcc
Confidence 56778899999999999987 76666554 223 33321 235666555443233 233456677777766665321
Q ss_pred ccCCcceEEEecC-CChhhhhhcccccccccccCCCccccCCCcccceeccCce-----EEEeccCcc
Q 003742 641 EVNSYLKVVFVPN-YNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCL-----IIGTLDGAN 702 (799)
Q Consensus 641 ~~~~~lkVvFlen-Y~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGal-----tlgtlDGan 702 (799)
...+.-.|+|+.. .+-+-...++.+|||-...|++ |+=|..-+-||.=|.+ .+|..-|+-
T Consensus 335 g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~pS~~--Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~ 400 (460)
T cd03788 335 GTLDWTPVRYLYRSLPREELAALYRAADVALVTPLR--DGMNLVAKEYVACQDDDPGVLILSEFAGAA 400 (460)
T ss_pred CCCCceeEEEEeCCCCHHHHHHHHHhccEEEeCccc--cccCcccceeEEEecCCCceEEEeccccch
Confidence 1111224777754 3555666788999999988874 7777777777776664 666555654
No 26
>PF11897 DUF3417: Protein of unknown function (DUF3417); InterPro: IPR024517 This domain of unknown function is found at the N terminus of members of the glycogen phosphorylase family.
Probab=95.97 E-value=0.0039 Score=59.62 Aligned_cols=44 Identities=18% Similarity=0.222 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHHHHH--HHHHHhhhcccCCCceEEEEEhhhccccch
Q 003742 54 EQAFFATAESVRDRLIQ--QWNETYHHFNKVDPKQTYYLSMEFLQGRTL 100 (799)
Q Consensus 54 ~~~y~Ala~~vRD~l~~--~w~~t~~~~~~~~~k~vyYlSmEfl~Gr~L 100 (799)
...|.++....++++.. .|..+ ......+.|+||||||+++.+|
T Consensus 73 l~~~~~v~~~f~~Ym~~~~~W~~~---~~~~~~~~IAYFSmEfGlhesL 118 (118)
T PF11897_consen 73 LARYDRVYARFEEYMSQKPTWFQE---PGDTPNPPIAYFSMEFGLHESL 118 (118)
T ss_pred HHHHHHHHHHHHHHHcCCCccccC---CCCCCCCCEEEEcccccccccC
Confidence 34455555566666643 46655 2233468999999999999876
No 27
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=95.96 E-value=0.016 Score=60.59 Aligned_cols=132 Identities=15% Similarity=0.114 Sum_probs=92.2
Q ss_pred CCCCceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCC
Q 003742 560 IDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTD 639 (799)
Q Consensus 560 ldp~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~D 639 (799)
..++....+++-|+.+.|+..+ ++..+.++ +. . ..+.++++.|+..+.+....+.+ +. +
T Consensus 199 ~~~~~~~i~~~G~~~~~K~~~~-li~a~~~l---~~-~------~~~~~l~i~G~~~~~~~~~~~~~--~~--------~ 257 (375)
T cd03821 199 ILPDKRIILFLGRLHPKKGLDL-LIEAFAKL---AE-R------FPDWHLVIAGPDEGGYRAELKQI--AA--------A 257 (375)
T ss_pred CCCCCcEEEEEeCcchhcCHHH-HHHHHHHh---hh-h------cCCeEEEEECCCCcchHHHHHHH--HH--------h
Confidence 3456778889999999999887 77666554 32 1 13578999998766654433322 11 1
Q ss_pred cccCCcceEEEecCCChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccCcchhhhhhccccchhhccc
Q 003742 640 PEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGA 719 (799)
Q Consensus 640 p~~~~~lkVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vg~en~~iFg~ 719 (799)
....+ +|.|+....-+-...++..||+....|.. |..|++-+-+|..|.+.|+|-.|...|+..+ ++.++...
T Consensus 258 ~~~~~--~v~~~g~~~~~~~~~~~~~adv~v~ps~~--e~~~~~~~Eama~G~PvI~~~~~~~~~~~~~---~~~~~~~~ 330 (375)
T cd03821 258 LGLED--RVTFTGMLYGEDKAAALADADLFVLPSHS--ENFGIVVAEALACGTPVVTTDKVPWQELIEY---GCGWVVDD 330 (375)
T ss_pred cCccc--eEEEcCCCChHHHHHHHhhCCEEEecccc--CCCCcHHHHHHhcCCCEEEcCCCCHHHHhhc---CceEEeCC
Confidence 22233 68888776544555678889999987776 9999999999999999999988877776654 44444433
No 28
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=95.89 E-value=0.017 Score=64.19 Aligned_cols=192 Identities=14% Similarity=0.105 Sum_probs=115.4
Q ss_pred CCCceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCCc
Q 003742 561 DPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDP 640 (799)
Q Consensus 561 dp~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp 640 (799)
+++....+++-|+.+.|...+ ++..+.. |++.+ .+.+++++|.. |.. ..+-+++.+ .
T Consensus 190 ~~~~~~i~~~grl~~~Kg~~~-li~a~~~---l~~~~-------~~~~l~i~G~g-~~~---~~l~~~~~~--------~ 246 (398)
T cd03796 190 DNDKITIVVISRLVYRKGIDL-LVGIIPE---ICKKH-------PNVRFIIGGDG-PKR---ILLEEMREK--------Y 246 (398)
T ss_pred CCCceEEEEEeccchhcCHHH-HHHHHHH---HHhhC-------CCEEEEEEeCC-chH---HHHHHHHHH--------h
Confidence 356788999999999999987 6665543 44301 35789999964 321 222233322 2
Q ss_pred ccCCcceEEEecCCChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccCcchhhhhhccccchhhcccc
Q 003742 641 EVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAV 720 (799)
Q Consensus 641 ~~~~~lkVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vg~en~~iFg~~ 720 (799)
.+.+ +|.|+...+-+-...++++||+-...|. .|..|.+-+=||..|.+-|+|--|..-|+.++ +..++...+
T Consensus 247 ~l~~--~v~~~G~~~~~~~~~~l~~ad~~v~pS~--~E~~g~~~~EAma~G~PVI~s~~gg~~e~i~~---~~~~~~~~~ 319 (398)
T cd03796 247 NLQD--RVELLGAVPHERVRDVLVQGHIFLNTSL--TEAFCIAIVEAASCGLLVVSTRVGGIPEVLPP---DMILLAEPD 319 (398)
T ss_pred CCCC--eEEEeCCCCHHHHHHHHHhCCEEEeCCh--hhccCHHHHHHHHcCCCEEECCCCCchhheeC---CceeecCCC
Confidence 3344 7888877666667778899999998776 59999999999999999999988888787754 222333323
Q ss_pred ccchhhhhhccCCCCCCCChHHHHHHHHHHcCCCCCCC----cHHHHHHHhhCCCCCCCCeeeecCccHHHHH
Q 003742 721 AEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYD----YNPLLDSLEGNTGYGRGDYFLVGYDFPSYLE 789 (799)
Q Consensus 721 ~~ev~~l~~~~~y~~~~~~~~i~~v~d~i~~g~f~~~~----f~~i~~~l~~~~~~~~~D~y~vl~Df~sy~~ 789 (799)
.+++..--.+--.++.......+.....+.+ .|+-.. +..+|+.++.. ...=+ |-|+..|..
T Consensus 320 ~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~-~fs~~~~~~~~~~~y~~l~~~-----~~~~~-~~~~~~~~~ 385 (398)
T cd03796 320 VESIVRKLEEAISILRTGKHDPWSFHNRVKK-MYSWEDVAKRTEKVYDRILQT-----PNLSL-LERLKRYYS 385 (398)
T ss_pred HHHHHHHHHHHHhChhhhhhHHHHHHHHHHh-hCCHHHHHHHHHHHHHHHhcC-----CCcch-HHhhhhhcc
Confidence 3333211111000111101112233333443 354333 78889988864 22223 666666643
No 29
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=95.26 E-value=0.066 Score=59.14 Aligned_cols=136 Identities=15% Similarity=0.178 Sum_probs=93.4
Q ss_pred CCCCceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCC-CCHHHHHHHHHHHHHhhhhcC
Q 003742 560 IDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFA-TYTNAKRIVKLVNDVGEVVNT 638 (799)
Q Consensus 560 ldp~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP-~y~~aK~iIk~I~~va~~in~ 638 (799)
++++...++++-|+..+|...+ ++..+.++ ++..|+ ...+++++|...+ |...-.++.+++...
T Consensus 215 ~~~~~~~i~~~G~l~~~K~~~~-li~a~~~l---~~~~~~-----~~~~l~ivG~~~~~g~~~~~~l~~~~~~~------ 279 (405)
T TIGR03449 215 LPLDTKVVAFVGRIQPLKAPDV-LLRAVAEL---LDRDPD-----RNLRVIVVGGPSGSGLATPDALIELAAEL------ 279 (405)
T ss_pred CCCCCcEEEEecCCCcccCHHH-HHHHHHHH---HhhCCC-----cceEEEEEeCCCCCcchHHHHHHHHHHHc------
Confidence 4566778899999999999877 66655543 331221 2368888886543 323333444444332
Q ss_pred CcccCCcceEEEecCCChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccCcchhhhhhccccchhhcc
Q 003742 639 DPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFG 718 (799)
Q Consensus 639 Dp~~~~~lkVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vg~en~~iFg 718 (799)
.+.+ +|.|+..-.-+-...++.+||+-...|. .|..|++-+-+|.-|.+.|+|-.|...|+.++ ..+++++.
T Consensus 280 --~l~~--~v~~~g~~~~~~~~~~l~~ad~~v~ps~--~E~~g~~~lEAma~G~Pvi~~~~~~~~e~i~~--~~~g~~~~ 351 (405)
T TIGR03449 280 --GIAD--RVRFLPPRPPEELVHVYRAADVVAVPSY--NESFGLVAMEAQACGTPVVAARVGGLPVAVAD--GETGLLVD 351 (405)
T ss_pred --CCCc--eEEECCCCCHHHHHHHHHhCCEEEECCC--CCCcChHHHHHHHcCCCEEEecCCCcHhhhcc--CCceEECC
Confidence 2334 6888876555556678999999988765 58899999999999999999999988777654 25666664
No 30
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=95.08 E-value=0.026 Score=59.91 Aligned_cols=127 Identities=17% Similarity=0.102 Sum_probs=90.8
Q ss_pred CCceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCCcc
Q 003742 562 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 641 (799)
Q Consensus 562 p~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~ 641 (799)
.+....+++-|+.++|+... ++..+..+. +..++++|..- ....+.+++... .
T Consensus 189 ~~~~~i~~~G~~~~~K~~~~-li~a~~~l~--------------~~~l~i~G~g~----~~~~~~~~~~~~--------~ 241 (357)
T cd03795 189 AGRPFFLFVGRLVYYKGLDV-LLEAAAALP--------------DAPLVIVGEGP----LEAELEALAAAL--------G 241 (357)
T ss_pred CCCcEEEEecccccccCHHH-HHHHHHhcc--------------CcEEEEEeCCh----hHHHHHHHHHhc--------C
Confidence 34568899999999999887 665544321 36888888642 223333333222 2
Q ss_pred cCCcceEEEecCCChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccCcchhhhhhccccchhhcc
Q 003742 642 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFG 718 (799)
Q Consensus 642 ~~~~lkVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vg~en~~iFg 718 (799)
... +|.|++..+=+....++..||+-...|....|..|.+-+-+|..|.+.|+|-.|..-|..++ ..++++++.
T Consensus 242 ~~~--~V~~~g~v~~~~~~~~~~~ad~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~-~~~~g~~~~ 315 (357)
T cd03795 242 LLD--RVRFLGRLDDEEKAALLAACDVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNL-HGVTGLVVP 315 (357)
T ss_pred Ccc--eEEEcCCCCHHHHHHHHHhCCEEEeCCcccccccchHHHHHHHcCCCEEecCCCCchhHHhh-CCCceEEeC
Confidence 233 79999987755566788999999988877789999998999999999999988887666554 235666664
No 31
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=95.05 E-value=0.032 Score=57.75 Aligned_cols=129 Identities=16% Similarity=0.058 Sum_probs=91.2
Q ss_pred CCCceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCCc
Q 003742 561 DPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDP 640 (799)
Q Consensus 561 dp~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp 640 (799)
+++.+..+++-|+..+|+..+ ++..+... +. . ..+.+|++.|...+.+...+. ++....
T Consensus 185 ~~~~~~i~~~G~~~~~k~~~~-li~~~~~l---~~-~------~~~~~l~i~G~~~~~~~~~~~---~~~~~~------- 243 (359)
T cd03808 185 PEDDPVFLFVARLLKDKGIDE-LLEAARIL---KA-K------GPNVRLLLVGDGDEENPAAIL---EIEKLG------- 243 (359)
T ss_pred CCCCcEEEEEeccccccCHHH-HHHHHHHH---Hh-c------CCCeEEEEEcCCCcchhhHHH---HHHhcC-------
Confidence 456788999999999999887 66665443 32 0 135799999998887766554 122211
Q ss_pred ccCCcceEEEecCCChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccCcchhhhhhccccchhhccc
Q 003742 641 EVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGA 719 (799)
Q Consensus 641 ~~~~~lkVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vg~en~~iFg~ 719 (799)
... +|.|+.. .+-...++..||+-...|.. |..|++-+-+|..|.+.|+|-.|..-|+.++ .++++++..
T Consensus 244 -~~~--~v~~~g~--~~~~~~~~~~adi~i~ps~~--e~~~~~~~Ea~~~G~Pvi~s~~~~~~~~i~~--~~~g~~~~~ 313 (359)
T cd03808 244 -LEG--RVEFLGF--RDDVPELLAAADVFVLPSYR--EGLPRVLLEAMAMGRPVIATDVPGCREAVID--GVNGFLVPP 313 (359)
T ss_pred -Ccc--eEEEeec--cccHHHHHHhccEEEecCcc--cCcchHHHHHHHcCCCEEEecCCCchhhhhc--CcceEEECC
Confidence 122 6777765 44566788999998876655 9999999999999999999977777666654 245555543
No 32
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=94.77 E-value=0.11 Score=57.08 Aligned_cols=135 Identities=18% Similarity=0.149 Sum_probs=90.7
Q ss_pred CCCCceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCC
Q 003742 560 IDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTD 639 (799)
Q Consensus 560 ldp~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~D 639 (799)
++++..+.+++-|++..|...+ ++..+..+ .. . ....+++++|...+.+...+++.+.+.+..
T Consensus 186 ~~~~~~~i~~vgrl~~~Kg~~~-ll~a~~~l---~~-~------~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~------ 248 (372)
T cd03792 186 IDPERPYITQVSRFDPWKDPFG-VIDAYRKV---KE-R------VPDPQLVLVGSGATDDPEGWIVYEEVLEYA------ 248 (372)
T ss_pred CCCCCcEEEEEeccccccCcHH-HHHHHHHH---Hh-h------CCCCEEEEEeCCCCCCchhHHHHHHHHHHh------
Confidence 5677888999999999999998 76665554 32 1 023578888876554443444444443322
Q ss_pred cccCCcceEEEecCC--ChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccCcchhhhhhccccchhhc
Q 003742 640 PEVNSYLKVVFVPNY--NVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLF 717 (799)
Q Consensus 640 p~~~~~lkVvFlenY--~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vg~en~~iF 717 (799)
...+ +|+|+... +-.....++.+||+-...|+ .|..|-.-+=+|-.|.+.|+|--|...|+.+. ..+++++
T Consensus 249 -~~~~--~v~~~~~~~~~~~~~~~~~~~ad~~v~~s~--~Eg~g~~~lEA~a~G~Pvv~s~~~~~~~~i~~--~~~g~~~ 321 (372)
T cd03792 249 -EGDP--DIHVLTLPPVSDLEVNALQRASTVVLQKSI--REGFGLTVTEALWKGKPVIAGPVGGIPLQIED--GETGFLV 321 (372)
T ss_pred -CCCC--CeEEEecCCCCHHHHHHHHHhCeEEEeCCC--ccCCCHHHHHHHHcCCCEEEcCCCCchhhccc--CCceEEe
Confidence 1223 57887665 44555678999999876654 78889888999999999999966655554432 2455554
Q ss_pred c
Q 003742 718 G 718 (799)
Q Consensus 718 g 718 (799)
.
T Consensus 322 ~ 322 (372)
T cd03792 322 D 322 (372)
T ss_pred C
Confidence 3
No 33
>PLN00142 sucrose synthase
Probab=94.41 E-value=0.1 Score=64.25 Aligned_cols=144 Identities=14% Similarity=0.107 Sum_probs=97.5
Q ss_pred HhCCcCCCCceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEE-eccCCCC---CHHHHHHHHHHH
Q 003742 555 VTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMI-GGKAFAT---YTNAKRIVKLVN 630 (799)
Q Consensus 555 ~~g~~ldp~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IF-aGKAaP~---y~~aK~iIk~I~ 630 (799)
..|..-+++.-+++++-|+.+.|.... ++....+..++. ....+++ ||...|. +......++.+.
T Consensus 564 ~lg~l~~~~kpvIl~VGRL~~~KGid~-LIeA~a~l~~l~----------~~~~LVIVGgg~d~~~s~d~ee~~el~~L~ 632 (815)
T PLN00142 564 HIGYLKDRKKPIIFSMARLDRVKNLTG-LVEWYGKNKRLR----------ELVNLVVVGGFIDPSKSKDREEIAEIKKMH 632 (815)
T ss_pred HhCCccCCCCcEEEEEecCcccCCHHH-HHHHHHHHHHhC----------CCcEEEEEECCccccccccHHHHHHHHHHH
Confidence 446556788878999999999999987 666554432221 1234555 4432332 233334455555
Q ss_pred HHhhhhcCCcccCCcceEEEecC---C--ChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccCcchhh
Q 003742 631 DVGEVVNTDPEVNSYLKVVFVPN---Y--NVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEI 705 (799)
Q Consensus 631 ~va~~in~Dp~~~~~lkVvFlen---Y--~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi 705 (799)
++++ +-.+.+ +|.|+.. + +-.+.+.+-.++||-.+.|. .|+.|..-+=||--|.+.|+|-.|...|+
T Consensus 633 ~La~----~lgL~~--~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~--~EgFGLvvLEAMA~GlPVVATdvGG~~EI 704 (815)
T PLN00142 633 SLIE----KYNLKG--QFRWIAAQTNRVRNGELYRYIADTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCQGGPAEI 704 (815)
T ss_pred HHHH----HcCCCC--cEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCc--ccCCCHHHHHHHHcCCCEEEcCCCCHHHH
Confidence 5554 445667 7888753 2 12345555557899987765 79999999999999999999999998888
Q ss_pred hhhccccchhhccc
Q 003742 706 RQEIGEENFFLFGA 719 (799)
Q Consensus 706 ~e~vg~en~~iFg~ 719 (799)
.++ ..++|++..
T Consensus 705 V~d--G~tG~LV~P 716 (815)
T PLN00142 705 IVD--GVSGFHIDP 716 (815)
T ss_pred hcC--CCcEEEeCC
Confidence 765 377888754
No 34
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=93.79 E-value=0.17 Score=62.25 Aligned_cols=145 Identities=17% Similarity=0.175 Sum_probs=100.3
Q ss_pred HhCCcCCCCceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCC---CCHHHHHHHHHHHH
Q 003742 555 VTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFA---TYTNAKRIVKLVND 631 (799)
Q Consensus 555 ~~g~~ldp~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP---~y~~aK~iIk~I~~ 631 (799)
..|...+|+.-+++++=|+.+-|.... ++....+..++.. ...-+|.||...+ .+...+..++.+.+
T Consensus 541 ~~G~l~d~~kpiIl~VGRL~~~KGid~-LIeA~~~l~~l~~---------~~~LVIVGGg~~~~~s~d~ee~~~i~~L~~ 610 (784)
T TIGR02470 541 HYGYLKDPNKPIIFSMARLDRVKNLTG-LVECYGRSPKLRE---------LVNLVVVAGKLDAKESKDREEQAEIEKMHN 610 (784)
T ss_pred HhCCCCCCCCcEEEEEeCCCccCCHHH-HHHHHHHhHhhCC---------CeEEEEEeCCcccccccchhHHHHHHHHHH
Confidence 457777899999999999999999887 6555443322221 1344566765442 34445556677777
Q ss_pred HhhhhcCCcccCCcceEEEecCC--Chh---hhhhcccccccccccCCCccccCCCcccceeccCceEEEeccCcchhhh
Q 003742 632 VGEVVNTDPEVNSYLKVVFVPNY--NVS---VAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIR 706 (799)
Q Consensus 632 va~~in~Dp~~~~~lkVvFlenY--~vs---lAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~ 706 (799)
+++ ...+.+ +|.|+--. ... +.+.+-.++||-.+.|. .|+.|-.-+=||.-|.+.|+|-.|-..|+.
T Consensus 611 la~----~~gL~g--~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~--~EpFGLvvLEAMAcGlPVVAT~~GG~~EiV 682 (784)
T TIGR02470 611 LID----QYQLHG--QIRWIGAQLNRVRNGELYRYIADTKGIFVQPAL--YEAFGLTVLEAMTCGLPTFATRFGGPLEII 682 (784)
T ss_pred HHH----HhCCCC--eEEEccCcCCcccHHHHHHHhhccCcEEEECCc--ccCCCHHHHHHHHcCCCEEEcCCCCHHHHh
Confidence 764 344667 78886521 122 33334446789988775 799999999999999999999999988887
Q ss_pred hhccccchhhccc
Q 003742 707 QEIGEENFFLFGA 719 (799)
Q Consensus 707 e~vg~en~~iFg~ 719 (799)
++ ..++|++..
T Consensus 683 ~d--g~tGfLVdp 693 (784)
T TIGR02470 683 QD--GVSGFHIDP 693 (784)
T ss_pred cC--CCcEEEeCC
Confidence 65 367888753
No 35
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=93.77 E-value=0.14 Score=53.23 Aligned_cols=121 Identities=15% Similarity=0.132 Sum_probs=83.9
Q ss_pred CCCCceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCC
Q 003742 560 IDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTD 639 (799)
Q Consensus 560 ldp~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~D 639 (799)
++++..+.+++-|++.+|+..+ ++..+..+ .+ . ..+.+++++|+..+.... +..++ + +
T Consensus 189 ~~~~~~~i~~~G~~~~~K~~~~-li~a~~~l---~~-~------~~~~~l~i~G~~~~~~~~-~~~~~------~----~ 246 (365)
T cd03807 189 LPEDTFLIGIVARLHPQKDHAT-LLRAAALL---LK-K------FPNARLLLVGDGPDRANL-ELLAL------K----E 246 (365)
T ss_pred CCCCCeEEEEecccchhcCHHH-HHHHHHHH---HH-h------CCCeEEEEecCCcchhHH-HHHHH------H----h
Confidence 4567788899999999999887 66655443 43 1 135789999986544322 22222 0 1
Q ss_pred cccCCcceEEEecCCChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccCcchhhhhh
Q 003742 640 PEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQE 708 (799)
Q Consensus 640 p~~~~~lkVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~ 708 (799)
-.+.+ +|.|+.. ++-...++..||+-...|.. |..|++-+-||.-|.+.|+|--|+.-|+.++
T Consensus 247 ~~~~~--~v~~~g~--~~~~~~~~~~adi~v~ps~~--e~~~~~~~Ea~a~g~PvI~~~~~~~~e~~~~ 309 (365)
T cd03807 247 LGLED--KVILLGE--RSDVPALLNALDVFVLSSLS--EGFPNVLLEAMACGLPVVATDVGDNAELVGD 309 (365)
T ss_pred cCCCc--eEEEccc--cccHHHHHHhCCEEEeCCcc--ccCCcHHHHHHhcCCCEEEcCCCChHHHhhc
Confidence 12233 5777653 33345678999999876665 9999999999999999999988887666654
No 36
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=93.70 E-value=0.083 Score=54.42 Aligned_cols=130 Identities=18% Similarity=0.131 Sum_probs=87.7
Q ss_pred CCCCceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCC
Q 003742 560 IDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTD 639 (799)
Q Consensus 560 ldp~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~D 639 (799)
.+++....+++-|+.+.|+..+ ++..+.. +.+ . ..+.++++.|.....+. +.+++....
T Consensus 185 ~~~~~~~i~~~g~~~~~k~~~~-~i~~~~~---l~~-~------~~~~~l~i~G~~~~~~~----~~~~~~~~~------ 243 (353)
T cd03811 185 IPPDGPVILAVGRLSPQKGFDT-LIRAFAL---LRK-E------GPDARLVILGDGPLREE----LEALAKELG------ 243 (353)
T ss_pred CCCCceEEEEEecchhhcChHH-HHHHHHH---hhh-c------CCCceEEEEcCCccHHH----HHHHHHhcC------
Confidence 3456788899999999999877 6555444 343 1 13578888896543322 223332222
Q ss_pred cccCCcceEEEecCCChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccCcchhhhhhccccchhhccc
Q 003742 640 PEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGA 719 (799)
Q Consensus 640 p~~~~~lkVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vg~en~~iFg~ 719 (799)
..+ +|.|+.. ++-...++..||+....|.. |..|++-+-+|.-|.+.|+|-.|..-|+.++. .+++++..
T Consensus 244 --~~~--~v~~~g~--~~~~~~~~~~~d~~i~ps~~--e~~~~~~~Ea~~~G~PvI~~~~~~~~e~i~~~--~~g~~~~~ 313 (353)
T cd03811 244 --LAD--RVHFLGF--QSNPYPYLKAADLFVLSSRY--EGFPNVLLEAMALGTPVVATDCPGPREILEDG--ENGLLVPV 313 (353)
T ss_pred --CCc--cEEEecc--cCCHHHHHHhCCEEEeCccc--CCCCcHHHHHHHhCCCEEEcCCCChHHHhcCC--CceEEECC
Confidence 223 5677665 33445688999999886654 99999999999999999999888776666542 55666654
Q ss_pred c
Q 003742 720 V 720 (799)
Q Consensus 720 ~ 720 (799)
.
T Consensus 314 ~ 314 (353)
T cd03811 314 G 314 (353)
T ss_pred C
Confidence 3
No 37
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=93.48 E-value=0.24 Score=51.10 Aligned_cols=132 Identities=17% Similarity=0.127 Sum_probs=89.1
Q ss_pred CCCCceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCC
Q 003742 560 IDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTD 639 (799)
Q Consensus 560 ldp~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~D 639 (799)
.+++....+++-|+...|.-.. ++..+. .+.. . ....++++.| +-.....+.+++..
T Consensus 195 ~~~~~~~i~~~g~~~~~k~~~~-~i~~~~---~~~~-~------~~~~~l~i~G----~~~~~~~~~~~~~~-------- 251 (374)
T cd03801 195 IPEDEPVILFVGRLVPRKGVDL-LLEALA---KLRK-E------YPDVRLVIVG----DGPLREELEALAAE-------- 251 (374)
T ss_pred CcCCCeEEEEecchhhhcCHHH-HHHHHH---HHhh-h------cCCeEEEEEe----CcHHHHHHHHHHHH--------
Confidence 3456778899999998887665 544433 3443 1 1247888888 11222222233312
Q ss_pred cccCCcceEEEecCCChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccCcchhhhhhccccchhhccc
Q 003742 640 PEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGA 719 (799)
Q Consensus 640 p~~~~~lkVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vg~en~~iFg~ 719 (799)
....+ +|.|++...-.-...++..||+-...++. |+.|++-+-+|..|.+.|+|-.|+.-|+.++ ..+++++..
T Consensus 252 ~~~~~--~v~~~g~~~~~~~~~~~~~~di~i~~~~~--~~~~~~~~Ea~~~g~pvI~~~~~~~~~~~~~--~~~g~~~~~ 325 (374)
T cd03801 252 LGLGD--RVTFLGFVPDEDLPALYAAADVFVLPSLY--EGFGLVLLEAMAAGLPVVASDVGGIPEVVED--GETGLLVPP 325 (374)
T ss_pred hCCCc--ceEEEeccChhhHHHHHHhcCEEEecchh--ccccchHHHHHHcCCcEEEeCCCChhHHhcC--CcceEEeCC
Confidence 22233 68888887656667788899999887766 9999999999999999999988888777664 255556554
Q ss_pred c
Q 003742 720 V 720 (799)
Q Consensus 720 ~ 720 (799)
.
T Consensus 326 ~ 326 (374)
T cd03801 326 G 326 (374)
T ss_pred C
Confidence 4
No 38
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=93.48 E-value=0.18 Score=53.67 Aligned_cols=132 Identities=20% Similarity=0.234 Sum_probs=93.9
Q ss_pred CCCCceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCC
Q 003742 560 IDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTD 639 (799)
Q Consensus 560 ldp~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~D 639 (799)
++++....+++-|+...|.+.. ++..+.. |++ . ..+.++++.|.-.+.....+.+.+++.+..
T Consensus 181 ~~~~~~~i~~~Gr~~~~Kg~~~-li~~~~~---l~~-~------~~~~~l~ivG~~~~~~~~~~~~~~~~~~~~------ 243 (355)
T cd03819 181 LPKGKPVILLPGRLTRWKGQEV-FIEALAR---LKK-D------DPDVHLLIVGDAQGRRFYYAELLELIKRLG------ 243 (355)
T ss_pred CCCCceEEEEeeccccccCHHH-HHHHHHH---HHh-c------CCCeEEEEEECCcccchHHHHHHHHHHHcC------
Confidence 4566778899999999999988 6665554 443 1 136799999987776666566666554433
Q ss_pred cccCCcceEEEecCCChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccCcchhhhhhccccchhhc
Q 003742 640 PEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLF 717 (799)
Q Consensus 640 p~~~~~lkVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vg~en~~iF 717 (799)
+.+ +|.|+.. .+--..++.+||+-...|. ..|..|++-+=||.-|.+.|+|-.|..-|+.++. .+++++
T Consensus 244 --~~~--~v~~~g~--~~~~~~~l~~ad~~i~ps~-~~e~~~~~l~EA~a~G~PvI~~~~~~~~e~i~~~--~~g~~~ 312 (355)
T cd03819 244 --LQD--RVTFVGH--CSDMPAAYALADIVVSAST-EPEAFGRTAVEAQAMGRPVIASDHGGARETVRPG--ETGLLV 312 (355)
T ss_pred --Ccc--eEEEcCC--cccHHHHHHhCCEEEecCC-CCCCCchHHHHHHhcCCCEEEcCCCCcHHHHhCC--CceEEe
Confidence 223 5777766 3334466789999887663 4689999999999999999999888887777653 255554
No 39
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=93.25 E-value=3.1 Score=48.35 Aligned_cols=131 Identities=17% Similarity=0.190 Sum_probs=78.0
Q ss_pred CceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEec-cCCCCCHHHHHHHHHHHHHhhhhcCCcc
Q 003742 563 NSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGG-KAFATYTNAKRIVKLVNDVGEVVNTDPE 641 (799)
Q Consensus 563 ~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaG-KAaP~y~~aK~iIk~I~~va~~in~Dp~ 641 (799)
+...++.+-|++.-|.... +|....++ +++ +|+.+ ..+++|..| -.......-.++.+.|.+++..||..-.
T Consensus 258 ~~~vIl~VgRLd~~KGi~~-ll~A~~~l--l~~-~p~~~---~~v~Lv~v~~p~rg~~~~~~~l~~~i~~lv~~in~~~~ 330 (456)
T TIGR02400 258 GRKLIIGVDRLDYSKGLPE-RLLAFERF--LEE-HPEWR---GKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRFG 330 (456)
T ss_pred CCeEEEEccccccccCHHH-HHHHHHHH--HHh-Ccccc---CceEEEEEecCCccCchHHHHHHHHHHHHHHHHHhccC
Confidence 4567889999999999887 77776665 233 44321 234555443 2222223334677777777776764222
Q ss_pred cCCcceEEEecC-CChhhhhhcccccccccccCC------Ccccc--CCCcccceeccCceEEEeccCcchhh
Q 003742 642 VNSYLKVVFVPN-YNVSVAELLIPGSELSQHIST------AGMEA--SGTSNMKFSLNGCLIIGTLDGANVEI 705 (799)
Q Consensus 642 ~~~~lkVvFlen-Y~vslAe~lipa~Dv~~qis~------ag~EA--SGTsnMK~~lNGaltlgtlDGanvEi 705 (799)
.-+...|+|+.. .+-+---.++.+|||-.-+|. ..+|| ||+- -+|++.+|...|+--++
T Consensus 331 ~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~P-----~~g~vVlS~~~G~~~~l 398 (456)
T TIGR02400 331 TLDWTPIRYLNRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQDP-----KDGVLILSEFAGAAQEL 398 (456)
T ss_pred CCCCccEEEEcCCCCHHHHHHHHHhCcEEEECccccccCccHHHHHHhcCC-----CCceEEEeCCCCChHHh
Confidence 222234777764 334444567899999776664 44454 4442 23777888888876333
No 40
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=93.12 E-value=0.21 Score=52.37 Aligned_cols=131 Identities=18% Similarity=0.203 Sum_probs=90.5
Q ss_pred CCCCceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCC
Q 003742 560 IDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTD 639 (799)
Q Consensus 560 ldp~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~D 639 (799)
++++....+++-|+..+|+... ++..+.+ +++ . ....++++.|... ..+.+.+++....
T Consensus 198 ~~~~~~~i~~~G~~~~~k~~~~-l~~~~~~---~~~-~------~~~~~l~i~G~~~----~~~~~~~~~~~~~------ 256 (374)
T cd03817 198 IPEDEPVLLYVGRLAKEKNIDF-LIRAFAR---LLK-E------EPDVKLVIVGDGP----EREELEELARELG------ 256 (374)
T ss_pred CCCCCeEEEEEeeeecccCHHH-HHHHHHH---HHH-h------CCCeEEEEEeCCc----hHHHHHHHHHHcC------
Confidence 4456778899999999998776 6555544 443 1 1356898888642 2233434433222
Q ss_pred cccCCcceEEEecCCChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccCcchhhhhhccccchhhccc
Q 003742 640 PEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGA 719 (799)
Q Consensus 640 p~~~~~lkVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vg~en~~iFg~ 719 (799)
..+ +|.|++...=+-...++..||+-...|. .|..|++-+-+|.-|.+.|+|-.|+.-|+.++. ++++++..
T Consensus 257 --~~~--~v~~~g~~~~~~~~~~~~~ad~~l~~s~--~e~~~~~~~Ea~~~g~PvI~~~~~~~~~~i~~~--~~g~~~~~ 328 (374)
T cd03817 257 --LAD--RVIFTGFVPREELPDYYKAADLFVFAST--TETQGLVLLEAMAAGLPVVAVDAPGLPDLVADG--ENGFLFPP 328 (374)
T ss_pred --CCC--cEEEeccCChHHHHHHHHHcCEEEeccc--ccCcChHHHHHHHcCCcEEEeCCCChhhheecC--ceeEEeCC
Confidence 223 6899988776667778889999887654 578888888889999999999999887766552 45566543
No 41
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=93.01 E-value=0.38 Score=53.67 Aligned_cols=136 Identities=15% Similarity=0.134 Sum_probs=90.5
Q ss_pred CCCCceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCC-CHHHHHHHHHHHHHhhhhcC
Q 003742 560 IDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFAT-YTNAKRIVKLVNDVGEVVNT 638 (799)
Q Consensus 560 ldp~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~-y~~aK~iIk~I~~va~~in~ 638 (799)
++++....+++-|+..+|.... ++..+.++ ++.. ....+++.|..... ........+.+..+++..+
T Consensus 189 ~~~~~~~il~~Grl~~~Kg~~~-Li~A~~~l---~~~~-------p~~~lvivG~g~~~~~~~~~~~~~~l~~~~~~l~- 256 (380)
T PRK15484 189 ISPDETVLLYAGRISPDKGILL-LMQAFEKL---ATAH-------SNLKLVVVGDPTASSKGEKAAYQKKVLEAAKRIG- 256 (380)
T ss_pred CCCCCeEEEEeccCccccCHHH-HHHHHHHH---HHhC-------CCeEEEEEeCCccccccchhHHHHHHHHHHHhcC-
Confidence 4456677889999999999987 76665543 3301 23578777754322 1122234444545543221
Q ss_pred CcccCCcceEEEecCCChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccCcchhhhhhccccchhhc
Q 003742 639 DPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLF 717 (799)
Q Consensus 639 Dp~~~~~lkVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vg~en~~iF 717 (799)
. +|.|+..-.-+-...++++||+-...|. -.|.-|..-+=+|.-|.+.|+|--|...|+.++ ..|++++
T Consensus 257 -----~--~v~~~G~~~~~~l~~~~~~aDv~v~pS~-~~E~f~~~~lEAma~G~PVI~s~~gg~~Eiv~~--~~~G~~l 325 (380)
T PRK15484 257 -----D--RCIMLGGQPPEKMHNYYPLADLVVVPSQ-VEEAFCMVAVEAMAAGKPVLASTKGGITEFVLE--GITGYHL 325 (380)
T ss_pred -----C--cEEEeCCCCHHHHHHHHHhCCEEEeCCC-CccccccHHHHHHHcCCCEEEeCCCCcHhhccc--CCceEEE
Confidence 2 6888876554556678899999986553 238888888889999999999998998888765 2566643
No 42
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=92.98 E-value=0.27 Score=53.26 Aligned_cols=134 Identities=15% Similarity=0.099 Sum_probs=87.6
Q ss_pred CCCceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccC-CCCCHHHHHHHHHHHHHhhhhcCC
Q 003742 561 DPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKA-FATYTNAKRIVKLVNDVGEVVNTD 639 (799)
Q Consensus 561 dp~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKA-aP~y~~aK~iIk~I~~va~~in~D 639 (799)
.++....+++-|+...|...+ ++..+..+ +... .+.++++.|.- .+.......-++.+.+-.
T Consensus 217 ~~~~~~i~~~gr~~~~k~~~~-ll~a~~~l---~~~~-------~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~------ 279 (398)
T cd03800 217 DPDKPRILAVGRLDPRKGIDT-LIRAYAEL---PELR-------ERANLVIVGGPRDDILAMDEEELRELAREL------ 279 (398)
T ss_pred CCCCcEEEEEcccccccCHHH-HHHHHHHH---HHhC-------CCeEEEEEECCCCcchhhhhHHHHHHHHhc------
Confidence 455677889999999998876 76665554 3201 23466665543 332222222222222211
Q ss_pred cccCCcceEEEecCCChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccCcchhhhhhccccchhhcc
Q 003742 640 PEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFG 718 (799)
Q Consensus 640 p~~~~~lkVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vg~en~~iFg 718 (799)
.+.+ +|.|++-..-+-...++..||+-...|. .|..|.+-+-+|..|.+.|++-.|..-|+.++. ++++++.
T Consensus 280 -~~~~--~v~~~g~~~~~~~~~~~~~adi~l~ps~--~e~~~~~l~Ea~a~G~Pvi~s~~~~~~e~i~~~--~~g~~~~ 351 (398)
T cd03800 280 -GVID--RVDFPGRVSREDLPALYRAADVFVNPAL--YEPFGLTALEAMACGLPVVATAVGGPRDIVVDG--VTGLLVD 351 (398)
T ss_pred -CCCc--eEEEeccCCHHHHHHHHHhCCEEEeccc--ccccCcHHHHHHhcCCCEEECCCCCHHHHccCC--CCeEEeC
Confidence 1223 6889988777667778889999887664 589999999999999999999888877766542 4555553
No 43
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=92.82 E-value=0.13 Score=54.64 Aligned_cols=136 Identities=18% Similarity=0.124 Sum_probs=92.6
Q ss_pred CCceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCCcc
Q 003742 562 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 641 (799)
Q Consensus 562 p~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~ 641 (799)
++.+..+++-|+..+|...+ ++..+.++ .. . ..+.++++.|...+.. .+-+++.+..
T Consensus 177 ~~~~~i~~~g~~~~~k~~~~-l~~~~~~l---~~-~------~~~~~l~i~G~~~~~~----~~~~~~~~~~-------- 233 (355)
T cd03799 177 GEPLRILSVGRLVEKKGLDY-LLEALALL---KD-R------GIDFRLDIVGDGPLRD----ELEALIAELG-------- 233 (355)
T ss_pred CCCeEEEEEeeeccccCHHH-HHHHHHHH---hh-c------CCCeEEEEEECCccHH----HHHHHHHHcC--------
Confidence 45567788999999999887 77776554 33 1 1357888888654432 2333332221
Q ss_pred cCCcceEEEecCCChhhhhhcccccccccccCCC----ccccCCCcccceeccCceEEEeccCcchhhhhhccccchhhc
Q 003742 642 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTA----GMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLF 717 (799)
Q Consensus 642 ~~~~lkVvFlenY~vslAe~lipa~Dv~~qis~a----g~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vg~en~~iF 717 (799)
..+ +|.|.....-.-...++..||+-...|.. ..|+.|++-+-+|.-|.+.|+|-.|+.-|+.++. .+++++
T Consensus 234 ~~~--~v~~~g~~~~~~l~~~~~~adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~i~~~--~~g~~~ 309 (355)
T cd03799 234 LED--RVTLLGAKSQEEVRELLRAADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIPELVEDG--ETGLLV 309 (355)
T ss_pred CCC--eEEECCcCChHHHHHHHHhCCEEEecceecCCCCccCccHHHHHHHHcCCCEEecCCCCcchhhhCC--CceEEe
Confidence 223 58888877666677888999998877665 2388899999999999999999888877766542 466666
Q ss_pred cc-cccch
Q 003742 718 GA-VAEQV 724 (799)
Q Consensus 718 g~-~~~ev 724 (799)
.. +.+++
T Consensus 310 ~~~~~~~l 317 (355)
T cd03799 310 PPGDPEAL 317 (355)
T ss_pred CCCCHHHH
Confidence 43 33443
No 44
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=92.70 E-value=0.21 Score=56.84 Aligned_cols=139 Identities=17% Similarity=0.124 Sum_probs=89.6
Q ss_pred CCCCceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCH---HHHHHHHHHHHHhhhh
Q 003742 560 IDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYT---NAKRIVKLVNDVGEVV 636 (799)
Q Consensus 560 ldp~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~---~aK~iIk~I~~va~~i 636 (799)
.+|+..+++++-|+++.|.+.+ ++....++.+++. .|..++++|....... ..++..+.+..+++
T Consensus 244 ~~~~~~~i~~vGrl~~~Kg~~~-li~A~~~l~~~~~---------~~~l~li~G~g~~~~~l~~~~~~~~~~~~~~~~-- 311 (439)
T TIGR02472 244 KDPEKPPILAISRPDRRKNIPS-LVEAYGRSPKLQE---------MANLVLVLGCRDDIRKMESQQREVLQKVLLLID-- 311 (439)
T ss_pred cccCCcEEEEEcCCcccCCHHH-HHHHHHhChhhhh---------hccEEEEeCCccccccccHHHHHHHHHHHHHHH--
Confidence 3566778899999999999998 7777665433332 1333445665322121 22333333444443
Q ss_pred cCCcccCCcceEEEecCCChhhhhhccccc----ccccccCCCccccCCCcccceeccCceEEEeccCcchhhhhhcccc
Q 003742 637 NTDPEVNSYLKVVFVPNYNVSVAELLIPGS----ELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEE 712 (799)
Q Consensus 637 n~Dp~~~~~lkVvFlenY~vslAe~lipa~----Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vg~e 712 (799)
.-.+.+ +|.|+....-+-...++++| |+-..-|. .|+-|..-+=||.-|.+.|+|--|...|+.++ .+
T Consensus 312 --~~~l~~--~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~--~E~fg~~~lEAma~G~PvV~s~~gg~~eiv~~--~~ 383 (439)
T TIGR02472 312 --RYDLYG--KVAYPKHHRPDDVPELYRLAARSRGIFVNPAL--TEPFGLTLLEAAACGLPIVATDDGGPRDIIAN--CR 383 (439)
T ss_pred --HcCCCc--eEEecCCCCHHHHHHHHHHHhhcCCEEecccc--cCCcccHHHHHHHhCCCEEEeCCCCcHHHhcC--CC
Confidence 234556 78888654433344555555 88766665 69999999999999999999988888777754 25
Q ss_pred chhhcc
Q 003742 713 NFFLFG 718 (799)
Q Consensus 713 n~~iFg 718 (799)
+++++-
T Consensus 384 ~G~lv~ 389 (439)
T TIGR02472 384 NGLLVD 389 (439)
T ss_pred cEEEeC
Confidence 677663
No 45
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=92.54 E-value=0.26 Score=51.94 Aligned_cols=120 Identities=17% Similarity=0.070 Sum_probs=86.2
Q ss_pred CCCceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCCc
Q 003742 561 DPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDP 640 (799)
Q Consensus 561 dp~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp 640 (799)
.++....+++-|+..+|+..+ ++..+.. +++ . ..+.++++.|...+.+......+ .. .
T Consensus 192 ~~~~~~i~~~G~~~~~K~~~~-~l~~~~~---~~~-~------~~~~~l~i~G~~~~~~~~~~~~~---~~--------~ 249 (365)
T cd03809 192 LLPRPYFLYVGTIEPRKNLER-LLEAFAR---LPA-K------GPDPKLVIVGKRGWLNEELLARL---RE--------L 249 (365)
T ss_pred CCCCCeEEEeCCCccccCHHH-HHHHHHH---HHH-h------cCCCCEEEecCCccccHHHHHHH---HH--------c
Confidence 345678889999999999877 6665544 343 1 12568889998777766554444 11 1
Q ss_pred ccCCcceEEEecCCChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccCcchhhh
Q 003742 641 EVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIR 706 (799)
Q Consensus 641 ~~~~~lkVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~ 706 (799)
...+ +|.|+...+-.-...++.+||+-...|+ .|..|.+-+-+|.-|.+.|+|--|+..|+.
T Consensus 250 ~~~~--~v~~~g~~~~~~~~~~~~~~d~~l~ps~--~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~ 311 (365)
T cd03809 250 GLGD--RVRFLGYVSDEELAALYRGARAFVFPSL--YEGFGLPVLEAMACGTPVIASNISSLPEVA 311 (365)
T ss_pred CCCC--eEEECCCCChhHHHHHHhhhhhhcccch--hccCCCCHHHHhcCCCcEEecCCCCcccee
Confidence 2233 6888877766666788899999887654 488888889999999999999777776654
No 46
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=91.91 E-value=0.36 Score=53.61 Aligned_cols=137 Identities=18% Similarity=0.225 Sum_probs=90.1
Q ss_pred CCCCceeeccccc-cccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHH----HH-HHHHHHHHHh
Q 003742 560 IDPNSLFDIQVKR-IHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTN----AK-RIVKLVNDVG 633 (799)
Q Consensus 560 ldp~slfd~~~kR-~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~----aK-~iIk~I~~va 633 (799)
+.++...++++-| +...|...+ ++..+.++ ++.. ....+++.|...|.|.. +. ..-+++..++
T Consensus 207 ~~~~~~~i~~vgR~l~~~Kg~~~-ll~a~~~l---~~~~-------~~~~lvivG~~~~~~g~~~~~~~~~~~~~~~~~~ 275 (396)
T cd03818 207 LTPGDEVITFVARNLEPYRGFHV-FMRALPRL---LRAR-------PDARVVIVGGDGVSYGAPPPDGESWKQHMLDELG 275 (396)
T ss_pred CCCCCeEEEEECCCcccccCHHH-HHHHHHHH---HHHC-------CCcEEEEEcCCCcccCCCCCCcccHHHHHHHHhh
Confidence 4566777888877 999999887 76665544 3301 24678888876554421 11 1122333333
Q ss_pred hhhcCCcccCCcceEEEecCCChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccCcchhhhhhccccc
Q 003742 634 EVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEEN 713 (799)
Q Consensus 634 ~~in~Dp~~~~~lkVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vg~en 713 (799)
...+ .+ +|.|+....-.-...++.+||+....|. .|..|.+-+-+|.-|.+.|+|-.|..-|+.++ .++
T Consensus 276 ~~~~-----~~--~V~f~G~v~~~~~~~~l~~adv~v~~s~--~e~~~~~llEAmA~G~PVIas~~~g~~e~i~~--~~~ 344 (396)
T cd03818 276 GRLD-----LS--RVHFLGRVPYDQYLALLQVSDVHVYLTY--PFVLSWSLLEAMACGCLVVGSDTAPVREVITD--GEN 344 (396)
T ss_pred cccC-----cc--eEEEeCCCCHHHHHHHHHhCcEEEEcCc--ccccchHHHHHHHCCCCEEEcCCCCchhhccc--CCc
Confidence 2111 12 7999987655555677899999987665 47777778899999999999988877777654 256
Q ss_pred hhhcc
Q 003742 714 FFLFG 718 (799)
Q Consensus 714 ~~iFg 718 (799)
++++.
T Consensus 345 G~lv~ 349 (396)
T cd03818 345 GLLVD 349 (396)
T ss_pred eEEcC
Confidence 66654
No 47
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=91.81 E-value=0.13 Score=55.58 Aligned_cols=112 Identities=18% Similarity=0.196 Sum_probs=80.2
Q ss_pred eeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCCcccCCc
Q 003742 566 FDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSY 645 (799)
Q Consensus 566 fd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~~~~~ 645 (799)
+.+++-|+..+|++.. ++..+. . .|..+++.|.-.. ... ++. . ..+
T Consensus 197 ~il~~G~~~~~K~~~~-li~a~~------~---------~~~~l~ivG~g~~----~~~-l~~--~----------~~~- 242 (351)
T cd03804 197 YYLSVGRLVPYKRIDL-AIEAFN------K---------LGKRLVVIGDGPE----LDR-LRA--K----------AGP- 242 (351)
T ss_pred EEEEEEcCccccChHH-HHHHHH------H---------CCCcEEEEECChh----HHH-HHh--h----------cCC-
Confidence 5678999999999987 655432 2 1356888885321 122 221 1 122
Q ss_pred ceEEEecCCChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccCcchhhhhhccccchhhc
Q 003742 646 LKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLF 717 (799)
Q Consensus 646 lkVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vg~en~~iF 717 (799)
+|.|+..-.-+-...++.+||+....|. |..|++.+-+|..|.+.|+|-.|...|+.++. ++++++
T Consensus 243 -~V~~~g~~~~~~~~~~~~~ad~~v~ps~---e~~g~~~~Eama~G~Pvi~~~~~~~~e~i~~~--~~G~~~ 308 (351)
T cd03804 243 -NVTFLGRVSDEELRDLYARARAFLFPAE---EDFGIVPVEAMASGTPVIAYGKGGALETVIDG--VTGILF 308 (351)
T ss_pred -CEEEecCCCHHHHHHHHHhCCEEEECCc---CCCCchHHHHHHcCCCEEEeCCCCCcceeeCC--CCEEEe
Confidence 6999998766667789999999997765 99999999999999999999888887765542 455555
No 48
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=91.61 E-value=0.31 Score=51.95 Aligned_cols=120 Identities=14% Similarity=0.079 Sum_probs=83.0
Q ss_pred CCCCceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCC
Q 003742 560 IDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTD 639 (799)
Q Consensus 560 ldp~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~D 639 (799)
..++....+++-|+..+|...+ ++..+..+ ++ . ..+.++++.|..... ..+-+++.+
T Consensus 188 ~~~~~~~i~~vGr~~~~Kg~~~-li~a~~~l---~~-~------~~~~~l~ivG~g~~~----~~~~~~~~~-------- 244 (358)
T cd03812 188 ILEDKFVIGHVGRFSEQKNHEF-LIEIFAEL---LK-K------NPNAKLLLVGDGELE----EEIKKKVKE-------- 244 (358)
T ss_pred CCCCCEEEEEEeccccccChHH-HHHHHHHH---HH-h------CCCeEEEEEeCCchH----HHHHHHHHh--------
Confidence 4567888999999999999988 66655544 43 1 135688898864321 222222211
Q ss_pred cccCCcceEEEecCCChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccCcchhhhhh
Q 003742 640 PEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQE 708 (799)
Q Consensus 640 p~~~~~lkVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~ 708 (799)
....+ +|.|+.- .+-...++..||+-...|. .|..|.+-+-+|--|.+.|+|--|..-|+.++
T Consensus 245 ~~~~~--~v~~~g~--~~~~~~~~~~adi~v~ps~--~E~~~~~~lEAma~G~PvI~s~~~~~~~~i~~ 307 (358)
T cd03812 245 LGLED--KVIFLGV--RNDVPELLQAMDVFLFPSL--YEGLPLVLIEAQASGLPCILSDTITKEVDLTD 307 (358)
T ss_pred cCCCC--cEEEecc--cCCHHHHHHhcCEEEeccc--ccCCCHHHHHHHHhCCCEEEEcCCchhhhhcc
Confidence 12333 5777764 4445567899999998876 49999999999999999999987877555543
No 49
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=91.30 E-value=0.58 Score=48.55 Aligned_cols=121 Identities=16% Similarity=0.122 Sum_probs=85.1
Q ss_pred CCCceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCCc
Q 003742 561 DPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDP 640 (799)
Q Consensus 561 dp~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp 640 (799)
+.+....+++-|+...|.... ++..+.+ +.+ . ..+..+++.|...+. +.+.+++. +.
T Consensus 199 ~~~~~~i~~~g~~~~~k~~~~-li~~~~~---~~~-~------~~~~~l~i~g~~~~~----~~~~~~~~--------~~ 255 (377)
T cd03798 199 PEDKKVILFVGRLVPRKGIDY-LIEALAR---LLK-K------RPDVHLVIVGDGPLR----EALEALAA--------EL 255 (377)
T ss_pred CCCceEEEEeccCccccCHHH-HHHHHHH---HHh-c------CCCeEEEEEcCCcch----HHHHHHHH--------hc
Confidence 445678899999999998776 6655544 343 1 135789999975442 22223332 22
Q ss_pred ccCCcceEEEecCCChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccCcchhhhhh
Q 003742 641 EVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQE 708 (799)
Q Consensus 641 ~~~~~lkVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~ 708 (799)
...+ .|.|++..+=+-...++..||+....|.. |+.|++-+-+|.-|.+.|++-.|+.-|..++
T Consensus 256 ~~~~--~v~~~g~~~~~~~~~~~~~ad~~i~~~~~--~~~~~~~~Ea~~~G~pvI~~~~~~~~~~~~~ 319 (377)
T cd03798 256 GLED--RVTFLGAVPHEEVPAYYAAADVFVLPSLR--EGFGLVLLEAMACGLPVVATDVGGIPEIITD 319 (377)
T ss_pred CCcc--eEEEeCCCCHHHHHHHHHhcCeeecchhh--ccCChHHHHHHhcCCCEEEecCCChHHHhcC
Confidence 2333 67787765555556788889999887766 9999999999999999999988888776654
No 50
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=91.13 E-value=0.37 Score=51.89 Aligned_cols=128 Identities=16% Similarity=0.220 Sum_probs=88.4
Q ss_pred CCCCceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCC
Q 003742 560 IDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTD 639 (799)
Q Consensus 560 ldp~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~D 639 (799)
+.++....+++-|+..+|.... ++..+. ++++ . .|.++++.|.. |. .+.+.+++...
T Consensus 193 ~~~~~~~il~~g~l~~~K~~~~-li~a~~---~l~~-~-------~~~~l~i~G~g-~~---~~~~~~~~~~~------- 249 (371)
T cd04962 193 APEGEKVLIHISNFRPVKRIDD-VIRIFA---KVRK-E-------VPARLLLVGDG-PE---RSPAERLAREL------- 249 (371)
T ss_pred CCCCCeEEEEecccccccCHHH-HHHHHH---HHHh-c-------CCceEEEEcCC-cC---HHHHHHHHHHc-------
Confidence 4567778889999999999887 655543 3444 1 35788888864 22 23333333222
Q ss_pred cccCCcceEEEecCCChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccCcchhhhhhccccchhhccc
Q 003742 640 PEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGA 719 (799)
Q Consensus 640 p~~~~~lkVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vg~en~~iFg~ 719 (799)
.+.+ +|.|+..- +-...++.+||+-...|+ .|+.|.+-+-+|..|.+.|+|--|..-|+.++. .+++++..
T Consensus 250 -~~~~--~v~~~g~~--~~~~~~~~~~d~~v~ps~--~E~~~~~~~EAma~g~PvI~s~~~~~~e~i~~~--~~G~~~~~ 320 (371)
T cd04962 250 -GLQD--DVLFLGKQ--DHVEELLSIADLFLLPSE--KESFGLAALEAMACGVPVVASNAGGIPEVVKHG--ETGFLVDV 320 (371)
T ss_pred -CCCc--eEEEecCc--ccHHHHHHhcCEEEeCCC--cCCCccHHHHHHHcCCCEEEeCCCCchhhhcCC--CceEEcCC
Confidence 2334 68887743 334567899999998775 799999999999999999999888776666542 56666643
No 51
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=91.10 E-value=0.49 Score=49.95 Aligned_cols=134 Identities=12% Similarity=0.070 Sum_probs=85.5
Q ss_pred CCceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHH-HHHHHHHhhhhcCCc
Q 003742 562 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRI-VKLVNDVGEVVNTDP 640 (799)
Q Consensus 562 p~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~i-Ik~I~~va~~in~Dp 640 (799)
++....+++-|++++|...+ ++..+.++ +. . ..+.++++.|..++....-+.. .++|.. .
T Consensus 183 ~~~~~i~~~G~~~~~K~~~~-ll~a~~~~---~~-~------~~~~~l~i~G~~~~~~~~~~~~~~~~i~~--------~ 243 (366)
T cd03822 183 DGRPVLLTFGLLRPYKGLEL-LLEALPLL---VA-K------HPDVRLLVAGETHPDLERYRGEAYALAER--------L 243 (366)
T ss_pred CCCeEEEEEeeccCCCCHHH-HHHHHHHH---Hh-h------CCCeEEEEeccCccchhhhhhhhHhHHHh--------c
Confidence 45677888999999998876 66665544 43 1 1357899999877655433221 112222 2
Q ss_pred ccCCcceEEEecC-CChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccCcchhhhhhccccchhhccc
Q 003742 641 EVNSYLKVVFVPN-YNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGA 719 (799)
Q Consensus 641 ~~~~~lkVvFlen-Y~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vg~en~~iFg~ 719 (799)
.+.+ +|.|+.. ..-+-...++..||+-...|+...+.-|..-+-+|.-|.+.|+|-.|. .|.... ..+.+++..
T Consensus 244 ~~~~--~v~~~~~~~~~~~~~~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~i~~--~~~g~~~~~ 318 (366)
T cd03822 244 GLAD--RVIFINRYLPDEELPELFSAADVVVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-AEEVLD--GGTGLLVPP 318 (366)
T ss_pred CCCC--cEEEecCcCCHHHHHHHHhhcCEEEecccccccccchHHHHHHHcCCCEEecCCCC-hheeee--CCCcEEEcC
Confidence 3344 7999988 455556678899999876554332244444566789999999998777 444332 255666643
No 52
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=90.87 E-value=0.62 Score=50.83 Aligned_cols=131 Identities=18% Similarity=0.115 Sum_probs=87.2
Q ss_pred CCCceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCCc
Q 003742 561 DPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDP 640 (799)
Q Consensus 561 dp~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp 640 (799)
.++....+++-|+.+.|.+.+ ++..+..+ .+..|.. ..+.++++.|.. | . -+++.+++.+..
T Consensus 191 ~~~~~~i~~vGrl~~~Kg~~~-li~a~~~l---~~~~~~~---~~~~~l~i~G~g-~--~-~~~~~~~~~~~~------- 252 (374)
T TIGR03088 191 ADESVVVGTVGRLQAVKDQPT-LVRAFALL---VRQLPEG---AERLRLVIVGDG-P--A-RGACEQMVRAAG------- 252 (374)
T ss_pred CCCCeEEEEEecCCcccCHHH-HHHHHHHH---HHhCccc---ccceEEEEecCC-c--h-HHHHHHHHHHcC-------
Confidence 356788999999999999987 76665554 3212211 135789999852 2 1 134444443322
Q ss_pred ccCCcceEEEecCCChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccCcchhhhhhccccchhhcc
Q 003742 641 EVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFG 718 (799)
Q Consensus 641 ~~~~~lkVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vg~en~~iFg 718 (799)
+.+ .|.|+. + ..-...++.+||+-...|. .|+.|.+-+=||..|.+.|+|--|...|+.++. .+++++.
T Consensus 253 -~~~--~v~~~g-~-~~~~~~~~~~adi~v~pS~--~Eg~~~~~lEAma~G~Pvv~s~~~g~~e~i~~~--~~g~~~~ 321 (374)
T TIGR03088 253 -LAH--LVWLPG-E-RDDVPALMQALDLFVLPSL--AEGISNTILEAMASGLPVIATAVGGNPELVQHG--VTGALVP 321 (374)
T ss_pred -Ccc--eEEEcC-C-cCCHHHHHHhcCEEEeccc--cccCchHHHHHHHcCCCEEEcCCCCcHHHhcCC--CceEEeC
Confidence 233 355543 3 2334567799999887665 699999999999999999999888888877652 4566664
No 53
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=90.54 E-value=0.76 Score=52.01 Aligned_cols=129 Identities=19% Similarity=0.164 Sum_probs=89.7
Q ss_pred CceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCCccc
Q 003742 563 NSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEV 642 (799)
Q Consensus 563 ~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~~ 642 (799)
+.+.++++-|+.+.|.... ++..+.+ |++ . ..+.++++.|.- . .-.++.+++.+.. +
T Consensus 221 ~~~~il~vGrl~~~Kg~~~-ll~a~~~---l~~-~------~~~~~l~ivG~G---~-~~~~l~~~~~~~~--------l 277 (406)
T PRK15427 221 TPLEIISVARLTEKKGLHV-AIEACRQ---LKE-Q------GVAFRYRILGIG---P-WERRLRTLIEQYQ--------L 277 (406)
T ss_pred CCeEEEEEeCcchhcCHHH-HHHHHHH---HHh-h------CCCEEEEEEECc---h-hHHHHHHHHHHcC--------C
Confidence 3456788999999999987 7666554 443 1 135678888852 2 2234444444332 3
Q ss_pred CCcceEEEecCCChhhhhhcccccccccccCCCc----cccCCCcccceeccCceEEEeccCcchhhhhhccccchhhcc
Q 003742 643 NSYLKVVFVPNYNVSVAELLIPGSELSQHISTAG----MEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFG 718 (799)
Q Consensus 643 ~~~lkVvFlenY~vslAe~lipa~Dv~~qis~ag----~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vg~en~~iFg 718 (799)
.+ +|.|+.-..-+-...++.+||+-...|..+ +|+.|..-|=+|.-|.+.|+|-.|...|+.++ .++++++.
T Consensus 278 ~~--~V~~~G~~~~~el~~~l~~aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E~v~~--~~~G~lv~ 353 (406)
T PRK15427 278 ED--VVEMPGFKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEA--DKSGWLVP 353 (406)
T ss_pred CC--eEEEeCCCCHHHHHHHHHhCCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchhhhcC--CCceEEeC
Confidence 34 677776544444567889999999877654 58888888999999999999988888777665 25677764
No 54
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=90.53 E-value=0.51 Score=49.47 Aligned_cols=130 Identities=14% Similarity=0.164 Sum_probs=85.6
Q ss_pred CCCceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCCc
Q 003742 561 DPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDP 640 (799)
Q Consensus 561 dp~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp 640 (799)
+++.+..+++-|+...|...+ ++..+. ++.+ . .+.++++.|...... .+.+++...
T Consensus 217 ~~~~~~i~~~G~~~~~k~~~~-l~~~~~---~l~~-~-------~~~~l~i~G~~~~~~----~~~~~~~~~-------- 272 (394)
T cd03794 217 LDDKFVVLYAGNIGRAQGLDT-LLEAAA---LLKD-R-------PDIRFLIVGDGPEKE----ELKELAKAL-------- 272 (394)
T ss_pred CCCcEEEEEecCcccccCHHH-HHHHHH---HHhh-c-------CCeEEEEeCCcccHH----HHHHHHHHc--------
Confidence 456788999999999998887 665544 3443 1 356888888644322 222222111
Q ss_pred ccCCcceEEEecCCChhhhhhcccccccccccCCCcc---ccCCCcccceeccCceEEEeccCcchhhhhhccccchhhc
Q 003742 641 EVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGM---EASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLF 717 (799)
Q Consensus 641 ~~~~~lkVvFlenY~vslAe~lipa~Dv~~qis~ag~---EASGTsnMK~~lNGaltlgtlDGanvEi~e~vg~en~~iF 717 (799)
... +|.|++..+-+-...++..||+-...+.... +++++.-+-+|.-|.+.|+|-.|..-|+..+. +++++|
T Consensus 273 ~~~---~v~~~g~~~~~~~~~~~~~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~~~~--~~g~~~ 347 (394)
T cd03794 273 GLD---NVTFLGRVPKEELPELLAAADVGLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAELVEEA--GAGLVV 347 (394)
T ss_pred CCC---cEEEeCCCChHHHHHHHHhhCeeEEeccCcccccccCchHHHHHHHCCCcEEEecCCCchhhhccC--CcceEe
Confidence 111 5999986665666678899999987776553 23333347799999999999999887766543 455555
Q ss_pred cc
Q 003742 718 GA 719 (799)
Q Consensus 718 g~ 719 (799)
..
T Consensus 348 ~~ 349 (394)
T cd03794 348 PP 349 (394)
T ss_pred CC
Confidence 43
No 55
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=89.85 E-value=0.77 Score=52.18 Aligned_cols=145 Identities=17% Similarity=0.171 Sum_probs=92.4
Q ss_pred CceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCCccc
Q 003742 563 NSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEV 642 (799)
Q Consensus 563 ~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~~ 642 (799)
+..+.+++=||...|+..+ ++.....+.+ . .|.. ...+.+++++|.....+. .+..+.+.++++ +-.+
T Consensus 236 ~~~~il~vgr~~~~K~~~~-li~A~~~l~~--~-~~~~--~~~~~~lvivG~~~~~~~--~~~~~~L~~~~~----~l~l 303 (419)
T cd03806 236 RENQILSIAQFRPEKNHPL-QLRAFAKLLK--R-LPEE--IKEKIKLVLIGSCRNEDD--EKRVEDLKLLAK----ELGL 303 (419)
T ss_pred CCcEEEEEEeecCCCCHHH-HHHHHHHHHH--h-Cccc--ccCceEEEEEcCCCCccc--HHHHHHHHHHHH----HhCC
Confidence 4457888889999999998 8777666533 1 1210 012467777776543332 112222333332 1223
Q ss_pred CCcceEEEecCCChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccC-cchhhhhhc-cccchhhcccc
Q 003742 643 NSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDG-ANVEIRQEI-GEENFFLFGAV 720 (799)
Q Consensus 643 ~~~lkVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDG-anvEi~e~v-g~en~~iFg~~ 720 (799)
.+ +|.|+.+-.-+--..++..||+....|.. |.=|-+-.-+|.-|.+.|++-.| ..-||.+.. +.++++++. +
T Consensus 304 ~~--~V~f~g~v~~~~l~~~l~~adv~v~~s~~--E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~~-d 378 (419)
T cd03806 304 ED--KVEFVVNAPFEELLEELSTASIGLHTMWN--EHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLAS-T 378 (419)
T ss_pred CC--eEEEecCCCHHHHHHHHHhCeEEEECCcc--CCcccHHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEEeC-C
Confidence 44 79999876666667888999999887664 88899989999999999988654 344555411 246777764 4
Q ss_pred ccch
Q 003742 721 AEQV 724 (799)
Q Consensus 721 ~~ev 724 (799)
.+++
T Consensus 379 ~~~l 382 (419)
T cd03806 379 AEEY 382 (419)
T ss_pred HHHH
Confidence 4444
No 56
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=88.98 E-value=0.89 Score=54.18 Aligned_cols=128 Identities=16% Similarity=0.150 Sum_probs=89.4
Q ss_pred CCCceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCCc
Q 003742 561 DPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDP 640 (799)
Q Consensus 561 dp~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp 640 (799)
.++..+++++=||++-|.+.. ++..+.++ ++. . .+..|++.|.- | . -.++-+++.+..
T Consensus 395 ~~~~~vIg~VgRl~~~Kg~~~-LI~A~a~l--lk~-~-------pdirLvIVGdG-~--~-~eeLk~la~elg------- 452 (578)
T PRK15490 395 QDADTTIGGVFRFVGDKNPFA-WIDFAARY--LQH-H-------PATRFVLVGDG-D--L-RAEAQKRAEQLG------- 452 (578)
T ss_pred CCCCcEEEEEEEEehhcCHHH-HHHHHHHH--HhH-C-------CCeEEEEEeCc-h--h-HHHHHHHHHHcC-------
Confidence 355668889999999999987 55554433 122 1 24688888853 1 1 123333333322
Q ss_pred ccCCcceEEEecCCChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccCcchhhhhhccccchhhccc
Q 003742 641 EVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGA 719 (799)
Q Consensus 641 ~~~~~lkVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vg~en~~iFg~ 719 (799)
+.+ +|.|+.. .+-...++.++||....|. .|+.|.+-+-+|.-|.+.|+|--|...|+.++ .+++|++..
T Consensus 453 -L~d--~V~FlG~--~~Dv~~~LaaADVfVlPS~--~EGfp~vlLEAMA~GlPVVATdvGG~~EiV~d--G~nG~LVp~ 522 (578)
T PRK15490 453 -ILE--RILFVGA--SRDVGYWLQKMNVFILFSR--YEGLPNVLIEAQMVGVPVISTPAGGSAECFIE--GVSGFILDD 522 (578)
T ss_pred -CCC--cEEECCC--hhhHHHHHHhCCEEEEccc--ccCccHHHHHHHHhCCCEEEeCCCCcHHHccc--CCcEEEECC
Confidence 344 6888875 3334457899999998775 69999999999999999999999999888765 377788754
No 57
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=88.66 E-value=1 Score=48.46 Aligned_cols=128 Identities=20% Similarity=0.179 Sum_probs=85.6
Q ss_pred ceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCCcccC
Q 003742 564 SLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVN 643 (799)
Q Consensus 564 slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~~~ 643 (799)
....+++-|+..+|.... ++..+.. |.+.+ ....++++|.- . .-.++-+++.+. .+.
T Consensus 188 ~~~i~~~G~~~~~K~~~~-li~a~~~---l~~~~-------~~~~l~ivG~g---~-~~~~~~~~~~~~--------~~~ 244 (367)
T cd05844 188 PPRILFVGRFVEKKGPLL-LLEAFAR---LARRV-------PEVRLVIIGDG---P-LLAALEALARAL--------GLG 244 (367)
T ss_pred CcEEEEEEeeccccChHH-HHHHHHH---HHHhC-------CCeEEEEEeCc---h-HHHHHHHHHHHc--------CCC
Confidence 346778889999998887 6655544 44311 24688899851 1 112333333222 123
Q ss_pred CcceEEEecCCChhhhhhcccccccccccCCC---c-cccCCCcccceeccCceEEEeccCcchhhhhhccccchhhcc
Q 003742 644 SYLKVVFVPNYNVSVAELLIPGSELSQHISTA---G-MEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFG 718 (799)
Q Consensus 644 ~~lkVvFlenY~vslAe~lipa~Dv~~qis~a---g-~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vg~en~~iFg 718 (799)
+ +|.|+....-.-...++.+||+-...|.. | .|+.|++-+=+|.=|.+.|+|-.|.+.|+.++ ..+++++.
T Consensus 245 ~--~v~~~g~~~~~~l~~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i~~--~~~g~~~~ 319 (367)
T cd05844 245 G--RVTFLGAQPHAEVRELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVED--GETGLLVP 319 (367)
T ss_pred C--eEEECCCCCHHHHHHHHHhCCEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCCchhheec--CCeeEEEC
Confidence 3 68898887656666788999997765543 2 68999999999999999999988888776654 25666664
No 58
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=88.27 E-value=0.96 Score=55.23 Aligned_cols=127 Identities=14% Similarity=0.172 Sum_probs=87.9
Q ss_pred CCCceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCCc
Q 003742 561 DPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDP 640 (799)
Q Consensus 561 dp~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp 640 (799)
..+.+.++++-|+++.|.+.+ ++..+..+. ++ . ....+++.|.- .. -..+.+++.+.
T Consensus 514 ~~~~~vIg~VGRL~~~KG~~~-LI~A~a~l~--~~-~-------p~~~LvIvG~G---~~-~~~L~~l~~~l-------- 570 (694)
T PRK15179 514 SDARFTVGTVMRVDDNKRPFL-WVEAAQRFA--AS-H-------PKVRFIMVGGG---PL-LESVREFAQRL-------- 570 (694)
T ss_pred CCCCeEEEEEEeCCccCCHHH-HHHHHHHHH--HH-C-------cCeEEEEEccC---cc-hHHHHHHHHHc--------
Confidence 345778899999999999998 766655542 22 1 23678888863 11 12333444332
Q ss_pred ccCCcceEEEecCCChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccCcchhhhhhccccchhhcc
Q 003742 641 EVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFG 718 (799)
Q Consensus 641 ~~~~~lkVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vg~en~~iFg 718 (799)
.+.+ +|.|+. |. +-...++.+|||....|. .|..|.+-+-+|..|.+.|+|--|..-|+.++ ..+++++.
T Consensus 571 gL~~--~V~flG-~~-~dv~~ll~aaDv~VlpS~--~Egfp~vlLEAMA~G~PVVat~~gG~~EiV~d--g~~GlLv~ 640 (694)
T PRK15179 571 GMGE--RILFTG-LS-RRVGYWLTQFNAFLLLSR--FEGLPNVLIEAQFSGVPVVTTLAGGAGEAVQE--GVTGLTLP 640 (694)
T ss_pred CCCC--cEEEcC-Cc-chHHHHHHhcCEEEeccc--cccchHHHHHHHHcCCeEEEECCCChHHHccC--CCCEEEeC
Confidence 2344 566655 43 334467899999998875 69999999999999999999988877777665 25777774
No 59
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=88.01 E-value=1.2 Score=46.62 Aligned_cols=125 Identities=17% Similarity=0.081 Sum_probs=85.2
Q ss_pred CCceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCCcc
Q 003742 562 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 641 (799)
Q Consensus 562 p~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~ 641 (799)
.+....+++-|+.+.|...+ ++..+..+ +. ....|++.|...+.+..-+.. .
T Consensus 189 ~~~~~i~~~G~~~~~k~~~~-li~~~~~l---~~---------~~~~l~i~G~~~~~~~~~~~~---------------~ 240 (359)
T cd03823 189 GGRLRFGFIGQLTPHKGVDL-LLEAFKRL---PR---------GDIELVIVGNGLELEEESYEL---------------E 240 (359)
T ss_pred CCceEEEEEecCccccCHHH-HHHHHHHH---Hh---------cCcEEEEEcCchhhhHHHHhh---------------c
Confidence 34567788899999999887 66655443 32 135788888766555433222 1
Q ss_pred cCCcceEEEecCCChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccCcchhhhhhccccchhhccc
Q 003742 642 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGA 719 (799)
Q Consensus 642 ~~~~lkVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vg~en~~iFg~ 719 (799)
..+ +|.|+..+.-.....++.+||+-...| ...|..|.+-+-+|.-|.+.|+|--|..-|+.++. .++++|..
T Consensus 241 ~~~--~v~~~g~~~~~~~~~~~~~ad~~i~ps-~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~--~~g~~~~~ 313 (359)
T cd03823 241 GDP--RVEFLGAYPQEEIDDFYAEIDVLVVPS-IWPENFPLVIREALAAGVPVIASDIGGMAELVRDG--VNGLLFPP 313 (359)
T ss_pred CCC--eEEEeCCCCHHHHHHHHHhCCEEEEcC-cccCCCChHHHHHHHCCCCEEECCCCCHHHHhcCC--CcEEEECC
Confidence 112 688998887777778899999988644 33577787778899999999999777766655432 24455533
No 60
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=87.52 E-value=19 Score=44.23 Aligned_cols=134 Identities=12% Similarity=0.166 Sum_probs=78.0
Q ss_pred CceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEecc-CCCCCHHHHHHHHHHHHHhhhhcCCcc
Q 003742 563 NSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGK-AFATYTNAKRIVKLVNDVGEVVNTDPE 641 (799)
Q Consensus 563 ~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGK-AaP~y~~aK~iIk~I~~va~~in~Dp~ 641 (799)
+..+++.+-|+...|-... .|....++ ++. .|+.+ ..+++|..|- +..+-..-.++-+.+.+++..||.--.
T Consensus 264 ~~~~il~VgRl~~~Kgi~~-~l~A~~~l--l~~-~p~~~---~~v~lv~v~~~sr~~~~~~~~l~~~~~~~v~~in~~~~ 336 (726)
T PRK14501 264 GRKIILSIDRLDYTKGIPR-RLLAFERF--LEK-NPEWR---GKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGEFG 336 (726)
T ss_pred CCEEEEEecCcccccCHHH-HHHHHHHH--HHh-Ccccc---CCEEEEEEecCCCcchHHHHHHHHHHHHHHHHHHhhcC
Confidence 4558889999999999887 77777766 333 44422 2356665542 222212334566666666666653211
Q ss_pred cCCcceEEEecC-CChhhhhhcccccccccccCCCccccCCCcccceec-----cCceEEEeccCcchhh
Q 003742 642 VNSYLKVVFVPN-YNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSL-----NGCLIIGTLDGANVEI 705 (799)
Q Consensus 642 ~~~~lkVvFlen-Y~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~l-----NGaltlgtlDGanvEi 705 (799)
.-+...|+|+.. ..-+---.++.+|||-.-+|.+ |.=|-.-+-||. .|.+.+|+.-|+--|+
T Consensus 337 ~~~~~pv~~~~~~~~~~~l~~ly~~aDv~v~~S~~--EG~~lv~~Eama~~~~~~g~~vls~~~G~~~~l 404 (726)
T PRK14501 337 TVDWTPIHYFYRSLPFEELVALYRAADVALVTPLR--DGMNLVAKEYVASRTDGDGVLILSEMAGAAAEL 404 (726)
T ss_pred CCCcceEEEEeCCCCHHHHHHHHHhccEEEecccc--cccCcccceEEEEcCCCCceEEEecccchhHHh
Confidence 122234666654 3444444588999998877653 222222222232 3889999988876554
No 61
>PLN02949 transferase, transferring glycosyl groups
Probab=86.11 E-value=2.6 Score=49.01 Aligned_cols=141 Identities=17% Similarity=0.152 Sum_probs=91.0
Q ss_pred ceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccC-CCCCHH-HHHHHHHHHHHhhhhcCCcc
Q 003742 564 SLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKA-FATYTN-AKRIVKLVNDVGEVVNTDPE 641 (799)
Q Consensus 564 slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKA-aP~y~~-aK~iIk~I~~va~~in~Dp~ 641 (799)
..+.+++=||.+.|+..+ ++..+.++.+-. +. ...+..++++|.. .++|.. -+++-+++.+ ..
T Consensus 268 ~~~il~vGR~~~~Kg~~l-lI~A~~~l~~~~---~~---~~~~~~LvIvG~~~~~~~~~~~~eL~~la~~--------l~ 332 (463)
T PLN02949 268 PPYIISVAQFRPEKAHAL-QLEAFALALEKL---DA---DVPRPKLQFVGSCRNKEDEERLQKLKDRAKE--------LG 332 (463)
T ss_pred CCEEEEEEeeeccCCHHH-HHHHHHHHHHhc---cc---cCCCcEEEEEeCCCCcccHHHHHHHHHHHHH--------cC
Confidence 345667779999999999 888777664311 11 1123456665544 344432 2334444432 23
Q ss_pred cCCcceEEEecCCChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccCc-chhhhh-hccccchhhccc
Q 003742 642 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGA-NVEIRQ-EIGEENFFLFGA 719 (799)
Q Consensus 642 ~~~~lkVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGa-nvEi~e-~vg~en~~iFg~ 719 (799)
+.+ +|.|+.+-.-+--..++..||+-...|. .|.=|.+-+=+|.-|.+.|++--|. ..||.. +.+.+++|++.
T Consensus 333 L~~--~V~f~g~v~~~el~~ll~~a~~~v~~s~--~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~~~g~tG~l~~- 407 (463)
T PLN02949 333 LDG--DVEFHKNVSYRDLVRLLGGAVAGLHSMI--DEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDEDGQQTGFLAT- 407 (463)
T ss_pred CCC--cEEEeCCCCHHHHHHHHHhCcEEEeCCc--cCCCChHHHHHHHcCCcEEEeCCCCCcceeeecCCCCcccccCC-
Confidence 445 7999988665656667889999887554 6999999999999999999987654 446643 33456778875
Q ss_pred cccch
Q 003742 720 VAEQV 724 (799)
Q Consensus 720 ~~~ev 724 (799)
+.++.
T Consensus 408 ~~~~l 412 (463)
T PLN02949 408 TVEEY 412 (463)
T ss_pred CHHHH
Confidence 44443
No 62
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=85.63 E-value=1.2 Score=47.05 Aligned_cols=123 Identities=13% Similarity=0.041 Sum_probs=82.7
Q ss_pred eeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCCcccCC
Q 003742 565 LFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNS 644 (799)
Q Consensus 565 lfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~~~~ 644 (799)
...+++-|+.+.|++.+ ++... +. ....+++.|...+.....+. +..... +.+
T Consensus 172 ~~i~~~Gr~~~~Kg~~~-li~~~------~~---------~~~~l~i~G~~~~~~~~~~~----~~~~~~-------~~~ 224 (335)
T cd03802 172 DYLLFLGRISPEKGPHL-AIRAA------RR---------AGIPLKLAGPVSDPDYFYRE----IAPELL-------DGP 224 (335)
T ss_pred CEEEEEEeeccccCHHH-HHHHH------Hh---------cCCeEEEEeCCCCHHHHHHH----HHHhcc-------cCC
Confidence 35678889999999987 55431 22 13468888876543332222 111110 233
Q ss_pred cceEEEecCCChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccCcchhhhhhccccchhhccc
Q 003742 645 YLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGA 719 (799)
Q Consensus 645 ~lkVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vg~en~~iFg~ 719 (799)
+|.|+..-+=.-...+++++|+....|. ..|.+|.+-+=+|--|.+.|+|--|...|+.++. .|++++..
T Consensus 225 --~v~~~G~~~~~~~~~~~~~~d~~v~ps~-~~E~~~~~~lEAma~G~PvI~~~~~~~~e~i~~~--~~g~l~~~ 294 (335)
T cd03802 225 --DIEYLGEVGGAEKAELLGNARALLFPIL-WEEPFGLVMIEAMACGTPVIAFRRGAVPEVVEDG--VTGFLVDS 294 (335)
T ss_pred --cEEEeCCCCHHHHHHHHHhCcEEEeCCc-ccCCcchHHHHHHhcCCCEEEeCCCCchhheeCC--CcEEEeCC
Confidence 6888876443334567899999987554 5699999999999999999999888887776642 47777754
No 63
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=85.22 E-value=27 Score=43.72 Aligned_cols=126 Identities=15% Similarity=0.130 Sum_probs=75.1
Q ss_pred ceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEE-EeccCCCCCH-HHHHHHHHHHHHhhhhcCCcc
Q 003742 564 SLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIM-IGGKAFATYT-NAKRIVKLVNDVGEVVNTDPE 641 (799)
Q Consensus 564 slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~I-FaGKAaP~y~-~aK~iIk~I~~va~~in~Dp~ 641 (799)
..+++.+-|++.-|--.+ +|...+++ +.+ .|+.+ ..+++| +||-+. ++. .-.++-+.|.+++..||..-.
T Consensus 279 ~~lIl~VgRLd~~KGi~~-lL~Afe~l--L~~-~P~~~---~kvvLvqia~psr-~~~~~y~~l~~~v~~l~g~In~~~g 350 (797)
T PLN03063 279 RKVILGVDRLDMIKGIPQ-KYLAFEKF--LEE-NPEWR---DKVMLVQIAVPTR-NDVPEYQKLKSQVHELVGRINGRFG 350 (797)
T ss_pred CeEEEEecccccccCHHH-HHHHHHHH--HHh-Ccccc---CcEEEEEEecCCC-CchHHHHHHHHHHHHHHHHhhcccc
Confidence 456778999987776665 77766665 233 45421 235655 444322 222 224466677777666764322
Q ss_pred cCCcceEEEecCC-ChhhhhhcccccccccccC------CCcccc--CCCcccceeccCceEEEeccCcc
Q 003742 642 VNSYLKVVFVPNY-NVSVAELLIPGSELSQHIS------TAGMEA--SGTSNMKFSLNGCLIIGTLDGAN 702 (799)
Q Consensus 642 ~~~~lkVvFlenY-~vslAe~lipa~Dv~~qis------~ag~EA--SGTsnMK~~lNGaltlgtlDGan 702 (799)
.-+..-|+|+..+ .-.---.++.+|||-.-+| ...+|| |||- -.|++.+|-..|+-
T Consensus 351 ~~~~~pv~~l~~~v~~~el~aly~~ADvfvvtSlrEGmnLv~lEamA~g~p-----~~gvlVlSe~~G~~ 415 (797)
T PLN03063 351 SVSSVPIHHLDCSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVACQKA-----KKGVLVLSEFAGAG 415 (797)
T ss_pred cCCCceeEEecCCCCHHHHHHHHHhCCEEEeCccccccCcchhhHheeecC-----CCCCEEeeCCcCch
Confidence 2234457777642 2223335789999876655 556775 5553 47889999888865
No 64
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=84.58 E-value=1.5 Score=46.63 Aligned_cols=124 Identities=12% Similarity=0.023 Sum_probs=83.2
Q ss_pred CCCCceeecccccccc--chhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhc
Q 003742 560 IDPNSLFDIQVKRIHE--YKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVN 637 (799)
Q Consensus 560 ldp~slfd~~~kR~he--YKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in 637 (799)
++++.....+..|... +|...+ ++..+.. ++. . ...+.++++.|...+....
T Consensus 187 ~~~~~~~i~~~~~~~~~~~K~~~~-ll~a~~~---l~~-~-----~~~~~~~~i~G~~~~~~~~---------------- 240 (365)
T cd03825 187 LPADKKIILFGAVGGTDPRKGFDE-LIEALKR---LAE-R-----WKDDIELVVFGASDPEIPP---------------- 240 (365)
T ss_pred CCCCCeEEEEEecCCCccccCHHH-HHHHHHH---hhh-c-----cCCCeEEEEeCCCchhhhc----------------
Confidence 3455555566666655 788777 6655544 332 1 0135789999976553221
Q ss_pred CCcccCCcceEEEecCCC-hhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccCcchhhhhhccccchhh
Q 003742 638 TDPEVNSYLKVVFVPNYN-VSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFL 716 (799)
Q Consensus 638 ~Dp~~~~~lkVvFlenY~-vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vg~en~~i 716 (799)
...+ +|.|+.... -.....++.+||+-...|. .|+.|.+-+-+|..|.+.|++-.|...|+..+. +++++
T Consensus 241 ---~~~~--~v~~~g~~~~~~~~~~~~~~ad~~l~ps~--~e~~g~~~~Eam~~g~PvI~~~~~~~~e~~~~~--~~g~~ 311 (365)
T cd03825 241 ---DLPF--PVHYLGSLNDDESLALIYSAADVFVVPSL--QENFPNTAIEALACGTPVVAFDVGGIPDIVDHG--VTGYL 311 (365)
T ss_pred ---cCCC--ceEecCCcCCHHHHHHHHHhCCEEEeccc--cccccHHHHHHHhcCCCEEEecCCCChhheeCC--CceEE
Confidence 1122 578877765 4455567899999988665 699999999999999999999888887776542 35555
Q ss_pred cc
Q 003742 717 FG 718 (799)
Q Consensus 717 Fg 718 (799)
+.
T Consensus 312 ~~ 313 (365)
T cd03825 312 AK 313 (365)
T ss_pred eC
Confidence 43
No 65
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=84.31 E-value=2.8 Score=47.41 Aligned_cols=141 Identities=14% Similarity=0.140 Sum_probs=87.9
Q ss_pred CCceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCCcc
Q 003742 562 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 641 (799)
Q Consensus 562 p~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~ 641 (799)
++..+.+.+-|+++.|.... ++..+..+.+... ... ......++++|.. | .-.++.+++.+..
T Consensus 230 ~~~~vi~~~grl~~~K~~~~-li~A~~~l~~~~~-~~~---~~~~i~l~ivG~G-~---~~~~l~~~~~~~~-------- 292 (415)
T cd03816 230 ERPALLVSSTSWTPDEDFGI-LLDALVAYEKSAA-TGP---KLPKLLCIITGKG-P---LKEKYLERIKELK-------- 292 (415)
T ss_pred CCceEEEEeccccCCCCHHH-HHHHHHHHHHhhc-ccc---cCCCEEEEEEecC-c---cHHHHHHHHHHcC--------
Confidence 34456667889999999887 7777766543221 000 0123788998863 2 1344445554332
Q ss_pred cCCcceEEEecCC-ChhhhhhcccccccccccCCC-ccccCCCcccceeccCceEEEeccCcchhhhhhccccchhhccc
Q 003742 642 VNSYLKVVFVPNY-NVSVAELLIPGSELSQHISTA-GMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGA 719 (799)
Q Consensus 642 ~~~~lkVvFlenY-~vslAe~lipa~Dv~~qis~a-g~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vg~en~~iFg~ 719 (799)
+. .++|+..| .-+-...++.+||+..-.+.. ..|.-|..-+=+|-=|.+.|+|--|..-|+.++ ..++++++
T Consensus 293 l~---~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~~~eiv~~--~~~G~lv~- 366 (415)
T cd03816 293 LK---KVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCIDELVKH--GENGLVFG- 366 (415)
T ss_pred CC---cEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCCHHHHhcC--CCCEEEEC-
Confidence 12 48887764 556667799999998621111 113334445677889999999988877787765 36788885
Q ss_pred cccchh
Q 003742 720 VAEQVP 725 (799)
Q Consensus 720 ~~~ev~ 725 (799)
+.+++.
T Consensus 367 d~~~la 372 (415)
T cd03816 367 DSEELA 372 (415)
T ss_pred CHHHHH
Confidence 455443
No 66
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=83.88 E-value=1.8 Score=55.04 Aligned_cols=140 Identities=14% Similarity=0.180 Sum_probs=88.8
Q ss_pred CCCCceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHH---HHHHHHHHHHHhhhh
Q 003742 560 IDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTN---AKRIVKLVNDVGEVV 636 (799)
Q Consensus 560 ldp~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~---aK~iIk~I~~va~~i 636 (799)
.+|+..++.++-|+.+.|.... ++..+.++.++.. . ...++|.|+... .+.+ +....+.+..+++
T Consensus 475 ~~pdkpvIL~VGRL~p~KGi~~-LIeAf~~L~~l~~-~-------~nL~LIiG~gdd-~d~l~~~~~~~l~~L~~li~-- 542 (1050)
T TIGR02468 475 TNPRKPMILALARPDPKKNITT-LVKAFGECRPLRE-L-------ANLTLIMGNRDD-IDEMSSGSSSVLTSVLKLID-- 542 (1050)
T ss_pred ccCCCcEEEEEcCCccccCHHH-HHHHHHHhHhhcc-C-------CCEEEEEecCch-hhhhhccchHHHHHHHHHHH--
Confidence 3588889999999999999988 7776665543332 1 123455544221 1111 1122233333332
Q ss_pred cCCcccCCcceEEEecCCChhhhhhccccc----ccccccCCCccccCCCcccceeccCceEEEeccCcchhhhhhcccc
Q 003742 637 NTDPEVNSYLKVVFVPNYNVSVAELLIPGS----ELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEE 712 (799)
Q Consensus 637 n~Dp~~~~~lkVvFlenY~vslAe~lipa~----Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vg~e 712 (799)
+-.+.+ +|.|+.--.-+-...++.+| ||-.+.|. .|.-|..-+=||.-|.+.|+|-.|...|+.+.. +
T Consensus 543 --~lgL~g--~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~--~EgFGLvlLEAMAcGlPVVASdvGG~~EII~~g--~ 614 (1050)
T TIGR02468 543 --KYDLYG--QVAYPKHHKQSDVPDIYRLAAKTKGVFINPAF--IEPFGLTLIEAAAHGLPMVATKNGGPVDIHRVL--D 614 (1050)
T ss_pred --HhCCCC--eEEecCCCCHHHHHHHHHHhhhcCCeeeCCcc--cCCCCHHHHHHHHhCCCEEEeCCCCcHHHhccC--C
Confidence 334566 78887532222223444544 68777665 699999999999999999999999998887753 6
Q ss_pred chhhccc
Q 003742 713 NFFLFGA 719 (799)
Q Consensus 713 n~~iFg~ 719 (799)
|++++..
T Consensus 615 nGlLVdP 621 (1050)
T TIGR02468 615 NGLLVDP 621 (1050)
T ss_pred cEEEECC
Confidence 7777753
No 67
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=82.28 E-value=2.8 Score=43.17 Aligned_cols=125 Identities=15% Similarity=0.066 Sum_probs=78.6
Q ss_pred CceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCCccc
Q 003742 563 NSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEV 642 (799)
Q Consensus 563 ~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~~ 642 (799)
+....+++-|+...|.... ++..+..+ ++.. ...++++.|...+... +-+++... .+
T Consensus 177 ~~~~i~~~g~~~~~K~~~~-l~~~~~~l---~~~~-------~~~~l~i~G~~~~~~~----~~~~~~~~--------~~ 233 (348)
T cd03820 177 KSKRILAVGRLVPQKGFDL-LIEAWAKI---AKKH-------PDWKLRIVGDGPEREA----LEALIKEL--------GL 233 (348)
T ss_pred CCcEEEEEEeeccccCHHH-HHHHHHHH---HhcC-------CCeEEEEEeCCCCHHH----HHHHHHHc--------CC
Confidence 4456778889999998887 66655544 3201 2468888886543322 22222221 22
Q ss_pred CCcceEEEecCCChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccCcch-hhhhhccccchhhcc
Q 003742 643 NSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANV-EIRQEIGEENFFLFG 718 (799)
Q Consensus 643 ~~~lkVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanv-Ei~e~vg~en~~iFg 718 (799)
.+ +|.|... .+-...++..||+-...|.. |..|++-+-+|..|.+.|+|-.|... |+.+. .+++++|.
T Consensus 234 ~~--~v~~~g~--~~~~~~~~~~ad~~i~ps~~--e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~~~~~--~~~g~~~~ 302 (348)
T cd03820 234 ED--RVILLGF--TKNIEEYYAKASIFVLTSRF--EGFPMVLLEAMAFGLPVISFDCPTGPSEIIED--GVNGLLVP 302 (348)
T ss_pred CC--eEEEcCC--cchHHHHHHhCCEEEeCccc--cccCHHHHHHHHcCCCEEEecCCCchHhhhcc--CcceEEeC
Confidence 23 5666665 45566788899998876654 88999999999999999998545443 33322 13555553
No 68
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=80.98 E-value=2.1 Score=46.64 Aligned_cols=123 Identities=20% Similarity=0.139 Sum_probs=80.3
Q ss_pred eeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCCcccCC
Q 003742 565 LFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNS 644 (799)
Q Consensus 565 lfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~~~~ 644 (799)
...+++-|+...|.... ++..+.++ +..+ ....+++.|....... +-+++. +..+.+
T Consensus 205 ~~i~~vgrl~~~K~~~~-li~a~~~l---~~~~-------~~~~l~i~G~g~~~~~----~~~~~~--------~~~~~~ 261 (372)
T cd04949 205 HKIITVARLAPEKQLDQ-LIKAFAKV---VKQV-------PDATLDIYGYGDEEEK----LKELIE--------ELGLED 261 (372)
T ss_pred CeEEEEEccCcccCHHH-HHHHHHHH---HHhC-------CCcEEEEEEeCchHHH----HHHHHH--------HcCCcc
Confidence 45678889999999887 76666554 3212 2357888887654322 222221 222333
Q ss_pred cceEEEecCCChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccC-cchhhhhhccccchhhcc
Q 003742 645 YLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDG-ANVEIRQEIGEENFFLFG 718 (799)
Q Consensus 645 ~lkVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDG-anvEi~e~vg~en~~iFg 718 (799)
.|.|.. |. +-...++..||+....|. .|+-|.+-+-||..|.+.|+|--| ...|+.+. .+|++++.
T Consensus 262 --~v~~~g-~~-~~~~~~~~~ad~~v~~S~--~Eg~~~~~lEAma~G~PvI~~~~~~g~~~~v~~--~~~G~lv~ 328 (372)
T cd04949 262 --YVFLKG-YT-RDLDEVYQKAQLSLLTSQ--SEGFGLSLMEALSHGLPVISYDVNYGPSEIIED--GENGYLVP 328 (372)
T ss_pred --eEEEcC-CC-CCHHHHHhhhhEEEeccc--ccccChHHHHHHhCCCCEEEecCCCCcHHHccc--CCCceEeC
Confidence 456654 43 345567888999999987 599999999999999999999644 34455443 25666665
No 69
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=80.77 E-value=2.2 Score=45.46 Aligned_cols=114 Identities=15% Similarity=0.141 Sum_probs=74.3
Q ss_pred eeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCCcccCCc
Q 003742 566 FDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSY 645 (799)
Q Consensus 566 fd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~~~~~ 645 (799)
+.+++-|+.++|...+ ++..+.. +.. ..++++.|...+.....+.+.+ .. ...+
T Consensus 195 ~i~~~G~~~~~Kg~~~-li~a~~~---l~~----------~~~l~ivG~~~~~~~~~~~~~~----~~-------~~~~- 248 (363)
T cd04955 195 YYLLVGRIVPENNIDD-LIEAFSK---SNS----------GKKLVIVGNADHNTPYGKLLKE----KA-------AADP- 248 (363)
T ss_pred EEEEEecccccCCHHH-HHHHHHh---hcc----------CceEEEEcCCCCcchHHHHHHH----Hh-------CCCC-
Confidence 5678899999999887 6554432 221 3578888887554444433332 11 1223
Q ss_pred ceEEEecCCChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccCcchhhhh
Q 003742 646 LKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQ 707 (799)
Q Consensus 646 lkVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e 707 (799)
+|.|+.-..=.-...++..||+....|. ..|..|.+-+=+|.-|.+.|+|-.|...|+.+
T Consensus 249 -~V~~~g~~~~~~~~~~~~~ad~~v~ps~-~~e~~~~~~~EAma~G~PvI~s~~~~~~e~~~ 308 (363)
T cd04955 249 -RIIFVGPIYDQELLELLRYAALFYLHGH-SVGGTNPSLLEAMAYGCPVLASDNPFNREVLG 308 (363)
T ss_pred -cEEEccccChHHHHHHHHhCCEEEeCCc-cCCCCChHHHHHHHcCCCEEEecCCccceeec
Confidence 6888875433333455566777765443 34888888899999999999998887766654
No 70
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=77.49 E-value=6.2 Score=44.59 Aligned_cols=129 Identities=20% Similarity=0.128 Sum_probs=79.5
Q ss_pred CceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCCccc
Q 003742 563 NSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEV 642 (799)
Q Consensus 563 ~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~~ 642 (799)
+....+++-|+.+.|+..+ ++..+.++ ++..|+ ....+++.|... . -..+.+++... ..
T Consensus 229 ~~~~il~~Grl~~~Kg~~~-li~a~~~l---~~~~p~-----~~l~~~iiG~g~---~-~~~l~~~~~~~--------~~ 287 (407)
T cd04946 229 DTLRIVSCSYLVPVKRVDL-IIKALAAL---AKARPS-----IKIKWTHIGGGP---L-EDTLKELAESK--------PE 287 (407)
T ss_pred CCEEEEEeeccccccCHHH-HHHHHHHH---HHhCCC-----ceEEEEEEeCch---H-HHHHHHHHHhc--------CC
Confidence 3467888999999999887 66655554 431121 235556666422 1 22333333311 11
Q ss_pred CCcceEEEecCCCh-hhhhhccc-ccccccccCCCccccCCCcccceeccCceEEEeccCcchhhhhhccccchhhcc
Q 003742 643 NSYLKVVFVPNYNV-SVAELLIP-GSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFG 718 (799)
Q Consensus 643 ~~~lkVvFlenY~v-slAe~lip-a~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vg~en~~iFg 718 (799)
.+ +|.|+.-..= .+.+.+-. .||+--+.| ..|+-|.+-|-||.-|.+.|+|--|...|+.++. +|++++.
T Consensus 288 ~~--~V~f~G~v~~~e~~~~~~~~~~~v~v~~S--~~Eg~p~~llEAma~G~PVIas~vgg~~e~i~~~--~~G~l~~ 359 (407)
T cd04946 288 NI--SVNFTGELSNSEVYKLYKENPVDVFVNLS--ESEGLPVSIMEAMSFGIPVIATNVGGTPEIVDNG--GNGLLLS 359 (407)
T ss_pred Cc--eEEEecCCChHHHHHHHhhcCCCEEEeCC--ccccccHHHHHHHHcCCCEEeCCCCCcHHHhcCC--CcEEEeC
Confidence 23 6777765332 33344332 366655444 5788899999999999999999989888877652 4677664
No 71
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=75.96 E-value=4.3 Score=46.53 Aligned_cols=123 Identities=13% Similarity=0.098 Sum_probs=81.2
Q ss_pred CCCceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCCc
Q 003742 561 DPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDP 640 (799)
Q Consensus 561 dp~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp 640 (799)
.|+..+++++-|+...|.... ++..+ +. . ....++|+|. .| .. .++-++ ++ .
T Consensus 260 ~~~~~~i~~vGrl~~~K~~~~-li~a~------~~-~-------~~~~l~ivG~-G~--~~-~~l~~~----~~---~-- 311 (465)
T PLN02871 260 EPEKPLIVYVGRLGAEKNLDF-LKRVM------ER-L-------PGARLAFVGD-GP--YR-EELEKM----FA---G-- 311 (465)
T ss_pred CCCCeEEEEeCCCchhhhHHH-HHHHH------Hh-C-------CCcEEEEEeC-Ch--HH-HHHHHH----hc---c--
Confidence 456778899999999998766 43322 22 1 1357889885 22 11 122222 21 1
Q ss_pred ccCCcceEEEecCCChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccCcchhhhhhc-cccchhhcc
Q 003742 641 EVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEI-GEENFFLFG 718 (799)
Q Consensus 641 ~~~~~lkVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~v-g~en~~iFg 718 (799)
.+|.|+.--.=+-...++.+|||-..-|. .|..|..-+=+|.-|.+.|+|-.|...|+.++. ..+++++|.
T Consensus 312 -----~~V~f~G~v~~~ev~~~~~~aDv~V~pS~--~E~~g~~vlEAmA~G~PVI~s~~gg~~eiv~~~~~~~~G~lv~ 383 (465)
T PLN02871 312 -----TPTVFTGMLQGDELSQAYASGDVFVMPSE--SETLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGFLYT 383 (465)
T ss_pred -----CCeEEeccCCHHHHHHHHHHCCEEEECCc--ccccCcHHHHHHHcCCCEEEcCCCCcHhhhhcCCCCCceEEeC
Confidence 15777654222445568899999887664 688888888999999999999888887877641 136777775
No 72
>PRK10307 putative glycosyl transferase; Provisional
Probab=74.28 E-value=8.9 Score=42.82 Aligned_cols=128 Identities=16% Similarity=0.154 Sum_probs=80.1
Q ss_pred CCCCceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCC
Q 003742 560 IDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTD 639 (799)
Q Consensus 560 ldp~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~D 639 (799)
++++....+++-|+.++|.... ++..+.+ +++ . .+.+|++.|.- | . -.++.+++.+..
T Consensus 225 ~~~~~~~i~~~G~l~~~kg~~~-li~a~~~---l~~-~-------~~~~l~ivG~g-~--~-~~~l~~~~~~~~------ 282 (412)
T PRK10307 225 LPDGKKIVLYSGNIGEKQGLEL-VIDAARR---LRD-R-------PDLIFVICGQG-G--G-KARLEKMAQCRG------ 282 (412)
T ss_pred CCCCCEEEEEcCccccccCHHH-HHHHHHH---hcc-C-------CCeEEEEECCC-h--h-HHHHHHHHHHcC------
Confidence 4567788899999999998776 6655443 333 1 24788888842 2 1 123333333221
Q ss_pred cccCCcceEEEecCCChhhhhhcccccccccccCCCccccCCCc-c---cceeccCceEEEeccCcchhhhhhccccchh
Q 003742 640 PEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTS-N---MKFSLNGCLIIGTLDGANVEIRQEIGEENFF 715 (799)
Q Consensus 640 p~~~~~lkVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTs-n---MK~~lNGaltlgtlDGanvEi~e~vg~en~~ 715 (799)
+ + +|.|+....-+-...++.+||+-...++ .|++|.. . .-+|..|.+.|+|-.|.. ++.+.+. ++++
T Consensus 283 --l-~--~v~f~G~~~~~~~~~~~~~aDi~v~ps~--~e~~~~~~p~kl~eama~G~PVi~s~~~g~-~~~~~i~-~~G~ 353 (412)
T PRK10307 283 --L-P--NVHFLPLQPYDRLPALLKMADCHLLPQK--AGAADLVLPSKLTNMLASGRNVVATAEPGT-ELGQLVE-GIGV 353 (412)
T ss_pred --C-C--ceEEeCCCCHHHHHHHHHhcCEeEEeec--cCcccccCcHHHHHHHHcCCCEEEEeCCCc-hHHHHHh-CCcE
Confidence 1 1 5889876666677778999999887655 3665432 1 246889999999976542 2222232 5777
Q ss_pred hcc
Q 003742 716 LFG 718 (799)
Q Consensus 716 iFg 718 (799)
++.
T Consensus 354 ~~~ 356 (412)
T PRK10307 354 CVE 356 (412)
T ss_pred EeC
Confidence 765
No 73
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=74.16 E-value=5.4 Score=41.95 Aligned_cols=121 Identities=17% Similarity=0.187 Sum_probs=82.6
Q ss_pred CCceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCCcc
Q 003742 562 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 641 (799)
Q Consensus 562 p~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~ 641 (799)
++....+++-|+...|.... ++..+. +++. . .+..+++.|.. | . +.-++ .
T Consensus 195 ~~~~~i~~~G~~~~~k~~~~-~i~~~~---~l~~-------~-~~~~l~i~G~~-~--~--~~~~~------~------- 244 (364)
T cd03814 195 PDRPVLLYVGRLAPEKNLEA-LLDADL---PLRR-------R-PPVRLVIVGDG-P--A--RARLE------A------- 244 (364)
T ss_pred CCCeEEEEEeccccccCHHH-HHHHHH---Hhhh-------c-CCceEEEEeCC-c--h--HHHHh------c-------
Confidence 45667789999999998776 554443 3443 1 24688888852 1 1 11122 1
Q ss_pred cCCcceEEEecCCChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccCcchhhhhhccccchhhcc
Q 003742 642 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFG 718 (799)
Q Consensus 642 ~~~~lkVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vg~en~~iFg 718 (799)
..+ +|.|+.-....-...++.+||+-...+. .|.-|..-+=+|-=|.+.|++-.|+.-|+.++. .+++++.
T Consensus 245 ~~~--~v~~~g~~~~~~~~~~~~~~d~~l~~s~--~e~~~~~~lEa~a~g~PvI~~~~~~~~~~i~~~--~~g~~~~ 315 (364)
T cd03814 245 RYP--NVHFLGFLDGEELAAAYASADVFVFPSR--TETFGLVVLEAMASGLPVVAPDAGGPADIVTDG--ENGLLVE 315 (364)
T ss_pred cCC--cEEEEeccCHHHHHHHHHhCCEEEECcc--cccCCcHHHHHHHcCCCEEEcCCCCchhhhcCC--cceEEcC
Confidence 112 6888887667777789999999876554 577788888899999999999888887776542 4555554
No 74
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=71.03 E-value=6.5 Score=46.25 Aligned_cols=122 Identities=20% Similarity=0.184 Sum_probs=84.0
Q ss_pred eeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCCcccCC
Q 003742 565 LFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNS 644 (799)
Q Consensus 565 lfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~~~~ 644 (799)
..++++-|+.+.|+... ++..+.++ +... .+.++++.|.. ... ..+-+++... .+.+
T Consensus 320 ~~il~vGrl~~~Kg~~~-li~A~~~l---~~~~-------p~~~l~i~G~G---~~~-~~l~~~i~~~--------~l~~ 376 (500)
T TIGR02918 320 FSIITASRLAKEKHIDW-LVKAVVKA---KKSV-------PELTFDIYGEG---GEK-QKLQKIINEN--------QAQD 376 (500)
T ss_pred eEEEEEeccccccCHHH-HHHHHHHH---HhhC-------CCeEEEEEECc---hhH-HHHHHHHHHc--------CCCC
Confidence 46788899999999987 66665554 3201 24677777742 221 2333333222 2234
Q ss_pred cceEEEecCCChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccC-cchhhhhhccccchhhcc
Q 003742 645 YLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDG-ANVEIRQEIGEENFFLFG 718 (799)
Q Consensus 645 ~lkVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDG-anvEi~e~vg~en~~iFg 718 (799)
+|.|+. + +.+++ ++..||+....|. .|+-|.+-|=||-.|.+.|+|--| ...|+.++ ..|++++.
T Consensus 377 --~V~f~G-~-~~~~~-~~~~adv~v~pS~--~Egfgl~~lEAma~G~PVI~~dv~~G~~eiI~~--g~nG~lv~ 442 (500)
T TIGR02918 377 --YIHLKG-H-RNLSE-VYKDYELYLSAST--SEGFGLTLMEAVGSGLGMIGFDVNYGNPTFIED--NKNGYLIP 442 (500)
T ss_pred --eEEEcC-C-CCHHH-HHHhCCEEEEcCc--cccccHHHHHHHHhCCCEEEecCCCCCHHHccC--CCCEEEEe
Confidence 677777 4 46654 5789999998886 699999999999999999999644 67787765 37888885
No 75
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=70.03 E-value=5.9 Score=36.62 Aligned_cols=103 Identities=17% Similarity=0.137 Sum_probs=59.8
Q ss_pred Cceeeccccccccchhhhhhhhh-HHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCCcc
Q 003742 563 NSLFDIQVKRIHEYKRQLLNILG-AIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 641 (799)
Q Consensus 563 ~slfd~~~kR~heYKRq~Lnil~-ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~ 641 (799)
|.++.+.+-+++.+|.... ++. .+.+ +++.. .+.+|+|.|...+ + ++.. .
T Consensus 1 ~~~~i~~~g~~~~~k~~~~-li~~~~~~---l~~~~-------p~~~l~i~G~~~~------~-l~~~---~-------- 51 (135)
T PF13692_consen 1 DILYIGYLGRIRPDKGLEE-LIEAALER---LKEKH-------PDIELIIIGNGPD------E-LKRL---R-------- 51 (135)
T ss_dssp --EEEE--S-SSGGGTHHH-HHH-HHHH---HHHHS-------TTEEEEEECESS-------H-HCCH---H--------
T ss_pred Ccccccccccccccccccc-hhhhHHHH---HHHHC-------cCEEEEEEeCCHH------H-HHHh---c--------
Confidence 3578888999999998886 665 5444 44411 3478989988444 1 2211 0
Q ss_pred cCCcceEEEecCCChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccC
Q 003742 642 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDG 700 (799)
Q Consensus 642 ~~~~lkVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDG 700 (799)
.. +|.|++.. +-...++.+|||... |.+.-|.+++.-+-+|..|.+.|.+-.|
T Consensus 52 -~~--~v~~~g~~--~e~~~~l~~~dv~l~-p~~~~~~~~~k~~e~~~~G~pvi~~~~~ 104 (135)
T PF13692_consen 52 -RP--NVRFHGFV--EELPEILAAADVGLI-PSRFNEGFPNKLLEAMAAGKPVIASDNG 104 (135)
T ss_dssp -HC--TEEEE-S---HHHHHHHHC-SEEEE--BSS-SCC-HHHHHHHCTT--EEEEHHH
T ss_pred -CC--CEEEcCCH--HHHHHHHHhCCEEEE-EeeCCCcCcHHHHHHHHhCCCEEECCcc
Confidence 11 68998887 344556888999995 4444456667778889999999998663
No 76
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=69.70 E-value=8.2 Score=41.01 Aligned_cols=120 Identities=16% Similarity=0.157 Sum_probs=79.8
Q ss_pred CCCCceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCC
Q 003742 560 IDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTD 639 (799)
Q Consensus 560 ldp~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~D 639 (799)
++++..+.+++-|+...|...+ ++..+.+ +++ . ..+.+|++.|. .| . .+++.+++....
T Consensus 184 ~~~~~~~~l~~g~~~~~kg~~~-li~a~~~---l~~-~------~~~~~l~i~G~-g~--~-~~~~~~~~~~~~------ 242 (360)
T cd04951 184 VKNDTFVILAVGRLVEAKDYPN-LLKAFAK---LLS-D------YLDIKLLIAGD-GP--L-RATLERLIKALG------ 242 (360)
T ss_pred cCCCCEEEEEEeeCchhcCcHH-HHHHHHH---HHh-h------CCCeEEEEEcC-CC--c-HHHHHHHHHhcC------
Confidence 4567778889999999999887 6555443 443 1 13478888884 22 1 234444443322
Q ss_pred cccCCcceEEEecCCChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccCcchhhhhh
Q 003742 640 PEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQE 708 (799)
Q Consensus 640 p~~~~~lkVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~ 708 (799)
..+ +|.|+.. ++-...++.+||+-...|. .|..|..-+=+|.-|.+.|++--|..-|+.++
T Consensus 243 --~~~--~v~~~g~--~~~~~~~~~~ad~~v~~s~--~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~ 303 (360)
T cd04951 243 --LSN--RVKLLGL--RDDIAAYYNAADLFVLSSA--WEGFGLVVAEAMACELPVVATDAGGVREVVGD 303 (360)
T ss_pred --CCC--cEEEecc--cccHHHHHHhhceEEeccc--ccCCChHHHHHHHcCCCEEEecCCChhhEecC
Confidence 122 5777764 3334567899999776555 48888888889999999999977777666553
No 77
>PLN02275 transferase, transferring glycosyl groups
Probab=69.30 E-value=14 Score=40.99 Aligned_cols=135 Identities=13% Similarity=0.081 Sum_probs=83.7
Q ss_pred eeeccccccccchhhhhhhhhHHHHHHHHHhcCcCC-------CCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhc
Q 003742 565 LFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQE-------RKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVN 637 (799)
Q Consensus 565 lfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~-------~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in 637 (799)
.+.+.+-|+.+.|.... ++.....+.......... ........|++.|.-. . -.++-+++.+..
T Consensus 214 ~~i~~~grl~~~k~~~~-li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~i~l~ivG~G~-~---~~~l~~~~~~~~---- 284 (371)
T PLN02275 214 ALVVSSTSWTPDEDFGI-LLEAAVMYDRRVAARLNESDSASGKQSLYPRLLFIITGKGP-Q---KAMYEEKISRLN---- 284 (371)
T ss_pred EEEEEeCceeccCCHHH-HHHHHHHHHhhhhhccccccccccccccCCCeEEEEEeCCC-C---HHHHHHHHHHcC----
Confidence 34567789999999887 666666553221100000 0011247899988642 1 123334443322
Q ss_pred CCcccCCcceEEEecCC-ChhhhhhcccccccccccCCCc--cccCCCcccceeccCceEEEeccCcchhhhhhccccch
Q 003742 638 TDPEVNSYLKVVFVPNY-NVSVAELLIPGSELSQHISTAG--MEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENF 714 (799)
Q Consensus 638 ~Dp~~~~~lkVvFlenY-~vslAe~lipa~Dv~~qis~ag--~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vg~en~ 714 (799)
+. +|+|+..| .-+-...++.+|||..- |..+ .|..|+.-+-+|.-|.+.|+|-.|..-|+.++ ..++
T Consensus 285 ----l~---~v~~~~~~~~~~~~~~~l~~aDv~v~-~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg~~eiv~~--g~~G 354 (371)
T PLN02275 285 ----LR---HVAFRTMWLEAEDYPLLLGSADLGVS-LHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIGELVKD--GKNG 354 (371)
T ss_pred ----CC---ceEEEcCCCCHHHHHHHHHhCCEEEE-eccccccccccHHHHHHHHCCCCEEEecCCChHHHccC--CCCe
Confidence 22 38887764 45555677899999863 2211 26666777889999999999998988887765 3678
Q ss_pred hhcc
Q 003742 715 FLFG 718 (799)
Q Consensus 715 ~iFg 718 (799)
+++.
T Consensus 355 ~lv~ 358 (371)
T PLN02275 355 LLFS 358 (371)
T ss_pred EEEC
Confidence 8875
No 78
>PHA01633 putative glycosyl transferase group 1
Probab=68.02 E-value=10 Score=42.59 Aligned_cols=113 Identities=17% Similarity=0.137 Sum_probs=78.2
Q ss_pred CCceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCCcc
Q 003742 562 PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 641 (799)
Q Consensus 562 p~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~ 641 (799)
|+.+..+++-|++++|.+.+ ++..+.++ .+..|.. ....++++.|. +. +. +..
T Consensus 146 ~~~~~i~~vGRl~~~KG~~~-LI~A~~~L---~~~~p~~---~~~i~l~ivG~--------~~----~~--------~l~ 198 (335)
T PHA01633 146 PDTIKFGIVSGLTKRKNMDL-MLQVFNEL---NTKYPDI---AKKIHFFVISH--------KQ----FT--------QLE 198 (335)
T ss_pred CCCeEEEEEeCCccccCHHH-HHHHHHHH---HHhCCCc---cccEEEEEEcH--------HH----HH--------HcC
Confidence 46778889999999999998 87777654 3212211 01246666662 11 11 112
Q ss_pred cCCcceEEEecCCC---hhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccCcchhh
Q 003742 642 VNSYLKVVFVPNYN---VSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEI 705 (799)
Q Consensus 642 ~~~~lkVvFlenY~---vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi 705 (799)
+.+ +|.|+-.++ -+-...++.+||+-..-|. .|+.|-.-+-||--|.+.|+|--|...|+
T Consensus 199 l~~--~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~--~EgfGlvlLEAMA~G~PVVas~~~~l~Ei 261 (335)
T PHA01633 199 VPA--NVHFVAEFGHNSREYIFAFYGAMDFTIVPSG--TEGFGMPVLESMAMGTPVIHQLMPPLDEF 261 (335)
T ss_pred CCC--cEEEEecCCCCCHHHHHHHHHhCCEEEECCc--cccCCHHHHHHHHcCCCEEEccCCCceee
Confidence 334 688875332 2334568899999998876 59999999999999999999988877665
No 79
>PHA01630 putative group 1 glycosyl transferase
Probab=49.18 E-value=14 Score=40.97 Aligned_cols=117 Identities=12% Similarity=0.005 Sum_probs=76.1
Q ss_pred ceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCCcccC
Q 003742 564 SLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVN 643 (799)
Q Consensus 564 slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~~~ 643 (799)
.+..++++|+++.|...+ ++..+.+ |++ . .....+++.|. -|.. ..+ . .+.
T Consensus 142 ~~vl~~~g~~~~~Kg~d~-Li~A~~~---l~~-~------~~~~~llivG~-~~~~---~~l---~-----------~~~ 192 (331)
T PHA01630 142 PCVLAILPHSWDRKGGDI-VVKIFHE---LQN-E------GYDFYFLIKSS-NMLD---PRL---F-----------GLN 192 (331)
T ss_pred CEEEEEeccccccCCHHH-HHHHHHH---HHh-h------CCCEEEEEEeC-cccc---hhh---c-----------ccc
Confidence 456688999999998887 6655544 443 1 12467777772 1111 111 0 011
Q ss_pred CcceEEEecCCChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccCcchhhhhhccccchhhcc
Q 003742 644 SYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFG 718 (799)
Q Consensus 644 ~~lkVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vg~en~~iFg 718 (799)
+ ..-+++ -+--..++.+||+....|+ .|+-|..-.=||.-|.+.|+|-.|..-|+.++ .+|++++.
T Consensus 193 ~--~~~~v~---~~~l~~~y~~aDv~v~pS~--~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~--~~ng~lv~ 258 (331)
T PHA01630 193 G--VKTPLP---DDDIYSLFAGCDILFYPVR--GGAFEIPVIEALALGLDVVVTEKGAWSEWVLS--NLDVYWIK 258 (331)
T ss_pred c--eeccCC---HHHHHHHHHhCCEEEECCc--cccCChHHHHHHHcCCCEEEeCCCCchhhccC--CCceEEee
Confidence 1 011122 2344557899999999888 49999999999999999999999988777654 36666653
No 80
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=47.83 E-value=1.7e+02 Score=34.81 Aligned_cols=139 Identities=15% Similarity=0.113 Sum_probs=90.5
Q ss_pred HHHHHHHhCCcCCCCceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccC-CCCCHHHHHHHH
Q 003742 549 ADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKA-FATYTNAKRIVK 627 (799)
Q Consensus 549 ~~~i~~~~g~~ldp~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKA-aP~y~~aK~iIk 627 (799)
++.++++.| +.-.++.+-|+..-|=-.. .|.-.+++ |.+ +|+.+ ..+++|..|.. ..+-..-+++.+
T Consensus 275 ~~~lr~~~~-----~~kiIl~VDRLDy~KGI~~-kl~Afe~~--L~~-~Pe~~---gkv~Lvqi~~psr~~v~~y~~l~~ 342 (487)
T TIGR02398 275 MERIRSELA-----GVKLILSAERVDYTKGILE-KLNAYERL--LER-RPELL---GKVTLVTACVPAASGMTIYDELQG 342 (487)
T ss_pred HHHHHHHcC-----CceEEEEecccccccCHHH-HHHHHHHH--HHh-Ccccc---CceEEEEEeCCCcccchHHHHHHH
Confidence 344556655 3446778889976665544 66666665 344 56543 33566655444 333344477888
Q ss_pred HHHHHhhhhcCCcccCCcceEEEecCC-ChhhhhhcccccccccccCCC------cccc--CCCcccceeccCceEEEec
Q 003742 628 LVNDVGEVVNTDPEVNSYLKVVFVPNY-NVSVAELLIPGSELSQHISTA------GMEA--SGTSNMKFSLNGCLIIGTL 698 (799)
Q Consensus 628 ~I~~va~~in~Dp~~~~~lkVvFlenY-~vslAe~lipa~Dv~~qis~a------g~EA--SGTsnMK~~lNGaltlgtl 698 (799)
.|.+++..||..=..-+.--|+++..+ .-+---.+..+|||-+-+|++ ++|+ |++ .-.|+|.+|-.
T Consensus 343 ~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~lrDGmNLVa~Eyva~~~-----~~~GvLILSef 417 (487)
T TIGR02398 343 QIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLRDGLNLVAKEYVAAQG-----LLDGVLVLSEF 417 (487)
T ss_pred HHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECccccccCcchhhHHhhhc-----CCCCCEEEecc
Confidence 889989888865444444557777664 444445688999999999987 4565 554 24799999999
Q ss_pred cCcchh
Q 003742 699 DGANVE 704 (799)
Q Consensus 699 DGanvE 704 (799)
-|+-.+
T Consensus 418 aGaa~~ 423 (487)
T TIGR02398 418 AGAAVE 423 (487)
T ss_pred ccchhh
Confidence 998733
No 81
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=46.84 E-value=37 Score=37.33 Aligned_cols=124 Identities=10% Similarity=0.043 Sum_probs=72.9
Q ss_pred eeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCCcccCC
Q 003742 565 LFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNS 644 (799)
Q Consensus 565 lfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~~~~ 644 (799)
...+++-|+..+|...+ ...+..+.+++ .+..+++.|.. |.. .++-+++.+. .+.+
T Consensus 181 ~~i~~~Grl~~~~~k~~--~~l~~a~~~~~----------~~~~l~ivG~g-~~~---~~l~~~~~~~--------~l~~ 236 (359)
T PRK09922 181 AVFLYVGRLKFEGQKNV--KELFDGLSQTT----------GEWQLHIIGDG-SDF---EKCKAYSREL--------GIEQ 236 (359)
T ss_pred cEEEEEEEEecccCcCH--HHHHHHHHhhC----------CCeEEEEEeCC-ccH---HHHHHHHHHc--------CCCC
Confidence 34567778876643322 11222222222 14688888864 222 2222323221 2334
Q ss_pred cceEEEecCCCh--hhhhhcccccccccccCCCccccCCCcccceeccCceEEEec-cCcchhhhhhccccchhhcc
Q 003742 645 YLKVVFVPNYNV--SVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTL-DGANVEIRQEIGEENFFLFG 718 (799)
Q Consensus 645 ~lkVvFlenY~v--slAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtl-DGanvEi~e~vg~en~~iFg 718 (799)
+|.|+..-+. ......+..||+....|. .|+-|.+-.=+|--|.+.|+|- .|...|+.++ ..+++++.
T Consensus 237 --~v~f~G~~~~~~~~~~~~~~~~d~~v~~s~--~Egf~~~~lEAma~G~Pvv~s~~~~g~~eiv~~--~~~G~lv~ 307 (359)
T PRK09922 237 --RIIWHGWQSQPWEVVQQKIKNVSALLLTSK--FEGFPMTLLEAMSYGIPCISSDCMSGPRDIIKP--GLNGELYT 307 (359)
T ss_pred --eEEEecccCCcHHHHHHHHhcCcEEEECCc--ccCcChHHHHHHHcCCCEEEeCCCCChHHHccC--CCceEEEC
Confidence 6888865332 333445567899997765 6888888888999999999996 5666666654 24666664
No 82
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=45.69 E-value=33 Score=38.25 Aligned_cols=110 Identities=6% Similarity=0.021 Sum_probs=65.9
Q ss_pred CCceeeccccccccchhhhhhhhhHHH-HHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCCc
Q 003742 562 PNSLFDIQVKRIHEYKRQLLNILGAIY-RYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDP 640 (799)
Q Consensus 562 p~slfd~~~kR~heYKRq~Lnil~ii~-~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp 640 (799)
++..+.+++-|+..+|.... ++..+. -+.+|+... ...++++.|.... ++ +.+++. .+
T Consensus 222 ~~~~~ilf~G~l~~~k~~~~-l~~~~~~~~~~l~~~~-------p~~~l~ivG~g~~-----~~----~~~l~~----~~ 280 (397)
T TIGR03087 222 PGKRVLVFTGAMDYWPNIDA-VVWFAERVFPAVRARR-------PAAEFYIVGAKPS-----PA----VRALAA----LP 280 (397)
T ss_pred CCCcEEEEEEecCCccCHHH-HHHHHHHHHHHHHHHC-------CCcEEEEECCCCh-----HH----HHHhcc----CC
Confidence 45567888999999998775 443332 234454311 2367888886432 12 222221 11
Q ss_pred ccCCcceEEEecCCChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccCc
Q 003742 641 EVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGA 701 (799)
Q Consensus 641 ~~~~~lkVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGa 701 (799)
.|.|+..-+ . ...++.+|||...-|+. .|..|..-+=+|.-|.+.|+|-.|.
T Consensus 281 ------~V~~~G~v~-~-~~~~~~~adv~v~Ps~~-~eG~~~~~lEAma~G~PVV~t~~~~ 332 (397)
T TIGR03087 281 ------GVTVTGSVA-D-VRPYLAHAAVAVAPLRI-ARGIQNKVLEAMAMAKPVVASPEAA 332 (397)
T ss_pred ------CeEEeeecC-C-HHHHHHhCCEEEecccc-cCCcccHHHHHHHcCCCEEecCccc
Confidence 366664332 3 35577999999865542 2444444677899999999996653
No 83
>PRK10125 putative glycosyl transferase; Provisional
Probab=45.52 E-value=39 Score=38.49 Aligned_cols=56 Identities=13% Similarity=-0.061 Sum_probs=46.3
Q ss_pred hhhcccccccccccCCCccccCCCcccceeccCceEEEeccCcchhhhhhccccchhhccc
Q 003742 659 AELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGA 719 (799)
Q Consensus 659 Ae~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vg~en~~iFg~ 719 (799)
-..++.+||+....|. .|+-|+..+=||.-|.+.|+|-=|...|+.++ .+++++..
T Consensus 300 l~~~y~~aDvfV~pS~--~Egfp~vilEAmA~G~PVVat~~gG~~Eiv~~---~~G~lv~~ 355 (405)
T PRK10125 300 LMSALNQMDALVFSSR--VDNYPLILCEALSIGVPVIATHSDAAREVLQK---SGGKTVSE 355 (405)
T ss_pred HHHHHHhCCEEEECCc--cccCcCHHHHHHHcCCCEEEeCCCChHHhEeC---CcEEEECC
Confidence 3457889999997776 79999999999999999999988887777654 47788754
No 84
>PLN02501 digalactosyldiacylglycerol synthase
Probab=33.88 E-value=65 Score=40.08 Aligned_cols=118 Identities=11% Similarity=0.068 Sum_probs=78.4
Q ss_pred ccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCCcccCCcce
Q 003742 568 IQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLK 647 (799)
Q Consensus 568 ~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~~~~~lk 647 (799)
.++-|++..|.... ++..+.. |.. . .....+++.|.- |. ..++-+++.+++ +.
T Consensus 550 LfVGRLa~EKGld~-LLeAla~---L~~-~------~pnvrLvIVGDG-P~---reeLe~la~eLg------------L~ 602 (794)
T PLN02501 550 YFLGKMVWAKGYRE-LIDLLAK---HKN-E------LDGFNLDVFGNG-ED---AHEVQRAAKRLD------------LN 602 (794)
T ss_pred EEEEcccccCCHHH-HHHHHHH---HHh-h------CCCeEEEEEcCC-cc---HHHHHHHHHHcC------------CE
Confidence 44569999999987 6555443 443 1 123577777753 32 122333333222 25
Q ss_pred EEEecCCChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccCcchhhhhhccccchhhccc
Q 003742 648 VVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGA 719 (799)
Q Consensus 648 VvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vg~en~~iFg~ 719 (799)
|.|+.. ...++.++.++||-.+-|+ .|.-|+.-+-||--|.+.|+|--|.+.. .. +..|+++++.
T Consensus 603 V~FLG~--~dd~~~lyasaDVFVlPS~--sEgFGlVlLEAMA~GlPVVATd~pG~e~-V~--~g~nGll~~D 667 (794)
T PLN02501 603 LNFLKG--RDHADDSLHGYKVFINPSI--SDVLCTATAEALAMGKFVVCADHPSNEF-FR--SFPNCLTYKT 667 (794)
T ss_pred EEecCC--CCCHHHHHHhCCEEEECCC--cccchHHHHHHHHcCCCEEEecCCCCce-Ee--ecCCeEecCC
Confidence 888854 4556678999999999887 6999999999999999999998776532 22 2356677643
No 85
>cd00127 DSPc Dual specificity phosphatases (DSP); Ser/Thr and Tyr protein phosphatases. Structurally similar to tyrosine-specific phosphatases but with a shallower active site cleft and a distinctive active site signature motif, HCxxGxxR. Characterized as VHR- or Cdc25-like.
Probab=31.93 E-value=74 Score=29.79 Aligned_cols=38 Identities=32% Similarity=0.361 Sum_probs=28.9
Q ss_pred CCceeEEeCCCc---ccccHHHHHHHHHhhcCCCHHHHHHHhccc
Q 003742 331 PSKVAVQLNDTH---PTLAIPELMRLLMDEEGLGWDEAWDITTRT 372 (799)
Q Consensus 331 ~~~~~ihlNdtH---palai~ElmR~L~de~gl~~~~A~~iv~~~ 372 (799)
+.++.||++.|+ +++++..+|+ ..+++.++|++.+++.
T Consensus 81 ~~~vlVHC~~G~~Rs~~~~~~~l~~----~~~~~~~~a~~~vr~~ 121 (139)
T cd00127 81 GGKVLVHCLAGVSRSATLVIAYLMK----TLGLSLREAYEFVKSR 121 (139)
T ss_pred CCcEEEECCCCCchhHHHHHHHHHH----HcCCCHHHHHHHHHHH
Confidence 357899999998 3455555554 4599999999999883
No 86
>PF14474 RTC4: RTC4-like domain
Probab=30.75 E-value=26 Score=33.91 Aligned_cols=32 Identities=34% Similarity=0.630 Sum_probs=26.2
Q ss_pred cccHHHH-HHHHHhhcCCCHHHHHHHhccceEe
Q 003742 344 TLAIPEL-MRLLMDEEGLGWDEAWDITTRTVAY 375 (799)
Q Consensus 344 alai~El-mR~L~de~gl~~~~A~~iv~~~~~y 375 (799)
.+++||+ +|..|++-+++.++|++|.+.+..|
T Consensus 85 ~VLvPEl~~~LI~EDm~v~~~~A~~il~eS~~~ 117 (124)
T PF14474_consen 85 YVLVPELAVRLIMEDMGVDDEEARQILEESSEY 117 (124)
T ss_pred HHhhHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 4789998 5666788899999999998887544
No 87
>PF00782 DSPc: Dual specificity phosphatase, catalytic domain; InterPro: IPR000340 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity. Consequently, maintaining an appropriate level of protein tyrosine phosphorylation is essential for many cellular functions. Tyrosine-specific protein phosphatases (PTPase; 3.1.3.48 from EC) catalyse the removal of a phosphate group attached to a tyrosine residue, using a cysteinyl-phosphate enzyme intermediate. These enzymes are key regulatory components in signal transduction pathways (such as the MAP kinase pathway) and cell cycle control, and are important in the control of cell growth, proliferation, differentiation and transformation [, ]. The PTP superfamily can be divided into four subfamilies []: (1) pTyr-specific phosphatases (2) dual specificity phosphatases (dTyr and dSer/dThr) (3) Cdc25 phosphatases (dTyr and/or dThr) (4) LMW (low molecular weight) phosphatases Based on their cellular localisation, PTPases are also classified as: Receptor-like, which are transmembrane receptors that contain PTPase domains [] Non-receptor (intracellular) PTPases [] All PTPases carry the highly conserved active site motif C(X)5R (PTP signature motif), employ a common catalytic mechanism, and share a similar core structure made of a central parallel beta-sheet with flanking alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif []. Functional diversity between PTPases is endowed by regulatory domains and subunits. This entry represents dual specificity protein-tyrosine phosphatases. Ser/Thr and Tyr dual specificity phosphatases are a group of enzymes with both Ser/Thr (3.1.3.16 from EC) and tyrosine specific protein phosphatase (3.1.3.48 from EC) activity able to remove both the serine/threonine or tyrosine-bound phosphate group from a wide range of phosphoproteins, including a number of enzymes which have been phosphorylated under the action of a kinase. Dual specificity protein phosphatases (DSPs) regulate mitogenic signal transduction and control the cell cycle. The crystal structure of a human DSP, vaccinia H1-related phosphatase (or VHR), has been determined at 2.1 angstrom resolution []. A shallow active site pocket in VHR allows for the hydrolysis of phosphorylated serine, threonine, or tyrosine protein residues, whereas the deeper active site of protein tyrosine phosphatases (PTPs) restricts substrate specificity to only phosphotyrosine. Positively charged crevices near the active site may explain the enzyme's preference for substrates with two phosphorylated residues. The VHR structure defines a conserved structural scaffold for both DSPs and PTPs. A "recognition region" connecting helix alpha1 to strand beta1, may determine differences in substrate specificity between VHR, the PTPs, and other DSPs. These proteins may also have inactive phosphatase domains, and dependent on the domain composition this loss of catalytic activity has different effects on protein function. Inactive single domain phosphatases can still specifically bind substrates, and protect again dephosphorylation, while the inactive domains of tandem phosphatases can be further subdivided into two classes. Those which bind phosphorylated tyrosine residues may recruit multi-phosphorylated substrates for the adjacent active domains and are more conserved, while the other class have accumulated several variable amino acid substitutions and have a complete loss of tyrosine binding capability. The second class shows a release of evolutionary constraint for the sites around the catalytic centre, which emphasises a difference in function from the first group. There is a region of higher conservation common to both classes, suggesting a new regulatory centre [].; GO: 0008138 protein tyrosine/serine/threonine phosphatase activity, 0006470 protein dephosphorylation; PDB: 2G6Z_A 1MKP_A 1YZ4_A 2P4D_A 1M3G_A 1ZZW_A 2OUD_A 2HXP_A 3LJ8_A 1OHD_A ....
Probab=27.08 E-value=1.2e+02 Score=28.32 Aligned_cols=36 Identities=25% Similarity=0.325 Sum_probs=29.4
Q ss_pred CceeEEeCCCc---ccccHHHHHHHHHhhcCCCHHHHHHHhcc
Q 003742 332 SKVAVQLNDTH---PTLAIPELMRLLMDEEGLGWDEAWDITTR 371 (799)
Q Consensus 332 ~~~~ihlNdtH---palai~ElmR~L~de~gl~~~~A~~iv~~ 371 (799)
.++.||+.-|. |++++.-|| ...|++.++|++.+++
T Consensus 74 ~~VlVHC~~G~~RS~~v~~ayLm----~~~~~~~~~A~~~v~~ 112 (133)
T PF00782_consen 74 GKVLVHCKAGLSRSGAVAAAYLM----KKNGMSLEEAIEYVRS 112 (133)
T ss_dssp SEEEEEESSSSSHHHHHHHHHHH----HHHTSSHHHHHHHHHH
T ss_pred ceeEEEeCCCcccchHHHHHHHH----HHcCCCHHHHHHHHHH
Confidence 46899999998 777776655 4469999999999977
No 88
>PLN02846 digalactosyldiacylglycerol synthase
Probab=23.72 E-value=1e+02 Score=36.32 Aligned_cols=118 Identities=14% Similarity=0.106 Sum_probs=79.3
Q ss_pred eccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCCcccCCcc
Q 003742 567 DIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYL 646 (799)
Q Consensus 567 d~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~~~~~l 646 (799)
.+++=|++.-|.... ++..+ .+|+. .. ....+++.|.- |.-. ++-+++.++. +
T Consensus 231 ~l~vGRL~~eK~~~~-Li~a~---~~l~~-~~------~~~~l~ivGdG-p~~~---~L~~~a~~l~------------l 283 (462)
T PLN02846 231 AYYIGKMVWSKGYKE-LLKLL---HKHQK-EL------SGLEVDLYGSG-EDSD---EVKAAAEKLE------------L 283 (462)
T ss_pred EEEEecCcccCCHHH-HHHHH---HHHHh-hC------CCeEEEEECCC-ccHH---HHHHHHHhcC------------C
Confidence 568899999999887 65544 44443 11 12467777755 2211 2222222221 1
Q ss_pred eEEEecCCChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccCcchhhhhhccccchhhcc
Q 003742 647 KVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFG 718 (799)
Q Consensus 647 kVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vg~en~~iFg 718 (799)
.+.|+..+. ..+.++.++||..+.|+ .|.-|+.-+-||--|.+.|++-.|.+ |+..+ ..|.++|.
T Consensus 284 ~~~vf~G~~--~~~~~~~~~DvFv~pS~--~Et~g~v~lEAmA~G~PVVa~~~~~~-~~v~~--~~ng~~~~ 348 (462)
T PLN02846 284 DVRVYPGRD--HADPLFHDYKVFLNPST--TDVVCTTTAEALAMGKIVVCANHPSN-EFFKQ--FPNCRTYD 348 (462)
T ss_pred cEEEECCCC--CHHHHHHhCCEEEECCC--cccchHHHHHHHHcCCcEEEecCCCc-ceeec--CCceEecC
Confidence 243455542 44578999999999997 79999999999999999999998875 76655 37777874
No 89
>PF00814 Peptidase_M22: Glycoprotease family; InterPro: IPR000905 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M22 (clan MK). The type example being O-sialoglycoprotein endopeptidase (3.4.24.57 from EC) from Pasteurella haemolytica (Mannheimia haemolytica). O-Sialoglycoprotein endopeptidase is secreted by the bacterium P. haemolytica, and digests only proteins that are heavily sialylated, in particular those with sialylated serine and threonine residues []. Substrate proteins include glycophorin A and leukocyte surface antigens CD34, CD43, CD44 and CD45 [, ]. Removal of glycosylation, by treatment with neuraminidase, completely negates susceptibility to O-sialoglycoprotein endopeptidase digestion [, ]. Sequence similarity searches have revealed other members of the M22 family, from yeast, Mycobacterium, Haemophilus influenzae and the cyanobacterium Synechocystis []. The zinc-binding and catalytic residues of this family have not been determined, although the motif HMEGH may be a zinc-binding region [].; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 2A6A_A 2GEL_G 2GEM_B 1OKJ_B 3ENO_A 3EN9_B 2VWB_B 3ENH_B 2IVO_D 2IVP_A ....
Probab=23.09 E-value=43 Score=36.29 Aligned_cols=55 Identities=24% Similarity=0.354 Sum_probs=39.3
Q ss_pred CcHHHHHHHHHHcCCChHHHHhhcc--ccCCCCCCcccchhhhHhhhh-ccCCCeEEEee
Q 003742 108 DIQNAYADALNNLGHVLEEIAEQEK--DAALGNGGLGRLASCFLDSMA-TLNLPAWGYGL 164 (799)
Q Consensus 108 gi~~~~~eaL~~lg~~l~~i~~~E~--D~~LgnGGLGrLAacfldS~A-~LglP~~G~Gl 164 (799)
.|...++++|++.|++++||-..=. =||++ +|| |.+..+.+.+| .+++|++|+.=
T Consensus 32 ~L~~~i~~~l~~~~~~~~did~iavt~GPGsf-tgL-rvG~~~Ak~La~~~~~Pli~v~~ 89 (268)
T PF00814_consen 32 NLPPLIEELLKEAGISLSDIDAIAVTRGPGSF-TGL-RVGLSFAKGLALALNIPLIGVSH 89 (268)
T ss_dssp HHHHHHHHHHHHHTS-GGGESEEEEEEESS-H-HHH-HHHHHHHHHHHHHTT--EEEEEH
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEecCCCcc-ccc-HHHHHHHHHHHHHhCCCeEeecc
Confidence 4567899999999999997765432 34555 477 88889999988 49999999863
No 90
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=22.15 E-value=2e+02 Score=34.37 Aligned_cols=148 Identities=16% Similarity=0.118 Sum_probs=104.1
Q ss_pred CCCCceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccC--CCCCHHHHHHHHHHHHHhhhhc
Q 003742 560 IDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKA--FATYTNAKRIVKLVNDVGEVVN 637 (799)
Q Consensus 560 ldp~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKA--aP~y~~aK~iIk~I~~va~~in 637 (799)
+.-.-+|+.-+-||..-|.|+| +|...++...... +++ +.-...+|+|+- -+.+..-.+.++-+.++.+..+
T Consensus 269 v~~~d~~~~siN~~~pgkd~~l-~l~a~~~~~~~i~-~~~----~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~ 342 (495)
T KOG0853|consen 269 VSGIDRFFPSINRFEPGKDQDL-ALPAFTLLHDSIP-EPS----ISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYD 342 (495)
T ss_pred ecccceEeeeeeecCCCCCcee-ehhhHHhhhcccC-CCC----CCceEEEEecCCCccccchhhHHHHHHHHHHHHHhC
Confidence 3334678888889999999999 8887666644332 222 234466666632 3445555666777777776543
Q ss_pred CCcccCCcceEEEecCCChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccCcchhhhhhccccchhhc
Q 003742 638 TDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLF 717 (799)
Q Consensus 638 ~Dp~~~~~lkVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vg~en~~iF 717 (799)
. ..+ .|.|++- .+-++...-++|.--...++..|+=|==-.-||-=|-++|+|--|--+||..+. .++|+-
T Consensus 343 l---~g~--~v~~~~s--~~~~~~yrl~adt~~v~~qPa~E~FGiv~IEAMa~glPvvAt~~GGP~EiV~~~--~tG~l~ 413 (495)
T KOG0853|consen 343 L---LGQ--FVWFLPS--TTRVAKYRLAADTKGVLYQPANEHFGIVPIEAMACGLPVVATNNGGPAEIVVHG--VTGLLI 413 (495)
T ss_pred c---cCc--eEEEecC--CchHHHHHHHHhcceEEecCCCCCccceeHHHHhcCCCEEEecCCCceEEEEcC--Ccceee
Confidence 2 133 5777665 344444666777777788888899999999999999999999999999998874 788888
Q ss_pred ccccc
Q 003742 718 GAVAE 722 (799)
Q Consensus 718 g~~~~ 722 (799)
....+
T Consensus 414 dp~~e 418 (495)
T KOG0853|consen 414 DPGQE 418 (495)
T ss_pred CCchH
Confidence 77554
No 91
>PF14407 Frankia_peptide: Ribosomally synthesized peptide prototyped by Frankia Franean1_4349.
Probab=22.04 E-value=25 Score=30.32 Aligned_cols=41 Identities=22% Similarity=0.236 Sum_probs=34.3
Q ss_pred hhhccccchhHHhhccCcHHHHHHHHHHcCCChHHHHhhcc
Q 003742 92 MEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEK 132 (799)
Q Consensus 92 mEfl~Gr~L~nnL~NLgi~~~~~eaL~~lg~~l~~i~~~E~ 132 (799)
||.+|||.+...=...-+...-.+|.++.++..++|...|.
T Consensus 2 ~e~lIgrAv~D~~FRqqllad~~~A~~~Y~Lt~eeL~al~~ 42 (61)
T PF14407_consen 2 VERLIGRAVTDEAFRQQLLADPEEACKEYDLTPEELQALER 42 (61)
T ss_pred HHHHHHHHHcCHHHHHHHhcCHHHHHhhCCCCHHHHHHHHH
Confidence 78999999887766666666677899999999999999885
No 92
>COG5405 HslV ATP-dependent protease HslVU (ClpYQ), peptidase subunit [Posttranslational modification, protein turnover, chaperones]
Probab=20.37 E-value=83 Score=32.30 Aligned_cols=38 Identities=29% Similarity=0.430 Sum_probs=31.0
Q ss_pred HHHHHHHhhcCCCHH----HHHHHhccceEeeecCCCcchhc
Q 003742 349 ELMRLLMDEEGLGWD----EAWDITTRTVAYTNHTVLPEALE 386 (799)
Q Consensus 349 ElmR~L~de~gl~~~----~A~~iv~~~~~yTnHT~~pealE 386 (799)
--+|-|++-.+++-. .|++|.-..|+||||.++-|-+|
T Consensus 135 ~AarAl~~~~~lsA~eIa~~sl~iA~eiciyTN~ni~ve~l~ 176 (178)
T COG5405 135 SAARALMENTELSAREIAEKSLKIAGDICIYTNHNIVVEELR 176 (178)
T ss_pred HHHHHHHhccCCCHHHHHHHHHhhhheEEEecCCcEEEEEee
Confidence 348889987788865 57889999999999999877654
Done!