Query 003742
Match_columns 799
No_of_seqs 209 out of 1141
Neff 5.1
Searched_HMMs 29240
Date Mon Mar 25 02:35:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003742.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003742hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ygp_A Yeast glycogen phosphor 100.0 6E-249 2E-253 2140.9 52.9 762 27-799 39-839 (879)
2 2gj4_A Glycogen phosphorylase, 100.0 2E-226 5E-231 1963.5 63.0 767 18-799 2-781 (824)
3 1l5w_A Maltodextrin phosphoryl 100.0 1E-224 4E-229 1942.5 53.7 750 26-799 4-759 (796)
4 2c4m_A Glycogen phosphorylase; 100.0 2E-221 8E-226 1914.2 54.2 742 27-798 4-751 (796)
5 3vue_A GBSS-I, granule-bound s 99.3 1.2E-11 4.1E-16 141.3 18.3 294 332-719 153-451 (536)
6 3nb0_A Glycogen [starch] synth 97.7 5.8E-05 2E-09 88.8 7.9 227 440-717 250-573 (725)
7 3fro_A GLGA glycogen synthase; 97.3 0.00085 2.9E-08 71.4 10.9 140 554-724 244-385 (439)
8 2qzs_A Glycogen synthase; glyc 96.3 0.0044 1.5E-07 67.9 6.6 139 552-719 280-425 (485)
9 1rzu_A Glycogen synthase 1; gl 96.0 0.013 4.3E-07 64.3 8.3 215 443-719 199-424 (485)
10 1uqt_A Alpha, alpha-trehalose- 95.8 0.054 1.8E-06 61.2 12.4 134 563-705 254-395 (482)
11 2f9f_A First mannosyl transfer 95.6 0.0086 3E-07 57.1 4.4 130 557-717 16-145 (177)
12 2bfw_A GLGA glycogen synthase; 95.6 0.012 4E-07 56.4 5.3 132 553-718 28-163 (200)
13 2iw1_A Lipopolysaccharide core 95.3 0.03 1E-06 58.3 7.6 128 560-718 192-319 (374)
14 2x6q_A Trehalose-synthase TRET 95.3 0.021 7.2E-07 61.0 6.5 139 560-724 227-369 (416)
15 3c48_A Predicted glycosyltrans 94.4 0.059 2E-06 57.7 7.1 136 560-718 239-374 (438)
16 3okp_A GDP-mannose-dependent a 94.3 0.046 1.6E-06 57.2 6.0 135 560-724 194-334 (394)
17 3s28_A Sucrose synthase 1; gly 93.5 0.047 1.6E-06 65.7 4.7 144 555-719 563-714 (816)
18 3oy2_A Glycosyltransferase B73 93.1 0.1 3.4E-06 55.6 6.1 129 563-708 183-314 (413)
19 2iuy_A Avigt4, glycosyltransfe 92.7 0.14 4.7E-06 53.1 6.3 130 563-724 161-298 (342)
20 2r60_A Glycosyl transferase, g 92.7 0.11 3.9E-06 57.1 6.0 135 560-718 258-407 (499)
21 2jjm_A Glycosyl transferase, g 92.2 0.079 2.7E-06 56.1 3.8 128 560-719 207-334 (394)
22 3qhp_A Type 1 capsular polysac 89.3 0.47 1.6E-05 43.8 5.7 112 565-707 3-116 (166)
23 2gek_A Phosphatidylinositol ma 88.9 0.26 8.8E-06 51.8 4.0 125 563-718 207-332 (406)
24 2vsy_A XCC0866; transferase, g 63.7 11 0.00037 41.9 7.1 103 566-696 378-481 (568)
25 3beo_A UDP-N-acetylglucosamine 52.7 13 0.00044 38.4 5.0 127 562-724 204-332 (375)
26 3t5t_A Putative glycosyltransf 51.2 35 0.0012 38.8 8.5 128 564-705 281-413 (496)
27 1vgv_A UDP-N-acetylglucosamine 48.7 44 0.0015 34.6 8.3 124 564-724 206-332 (384)
28 2hy7_A Glucuronosyltransferase 34.1 58 0.002 34.9 6.6 93 565-698 223-322 (406)
29 2x0d_A WSAF; GT4 family, trans 33.2 66 0.0023 34.8 6.9 121 564-718 241-362 (413)
30 3u7q_B Nitrogenase molybdenum- 30.6 1.7E+02 0.0057 33.3 9.9 136 14-163 307-470 (523)
31 3s4e_A Dual specificity protei 28.1 71 0.0024 29.1 5.2 37 332-372 82-121 (144)
32 3ezz_A Dual specificity protei 25.1 98 0.0034 28.0 5.6 37 332-372 82-121 (144)
33 3emu_A Leucine rich repeat and 24.2 80 0.0027 29.6 4.9 37 332-372 88-127 (161)
No 1
>1ygp_A Yeast glycogen phosphorylase; phosphorylated form, glycosyltransferase; HET: PLP; 2.80A {Saccharomyces cerevisiae} SCOP: c.87.1.4
Probab=100.00 E-value=5.5e-249 Score=2140.95 Aligned_cols=762 Identities=48% Similarity=0.828 Sum_probs=728.8
Q ss_pred CCHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCceEEEEEhhhccccchhHHhhc
Q 003742 27 NEPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTLTNAIGS 106 (799)
Q Consensus 27 ~~~~~~k~~~~~~l~~~~g~~~~~at~~~~y~Ala~~vRD~l~~~w~~t~~~~~~~~~k~vyYlSmEfl~Gr~L~nnL~N 106 (799)
+++++|+++|.+||++++|+++.+||..++|.|||.+|||+++++|.+|++.+.+.++|+||||||||||||+|.|||+|
T Consensus 39 ~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~y~al~~~vrd~l~~~W~~t~~~~~~~~~k~vyYlS~EFL~Gr~L~n~l~n 118 (879)
T 1ygp_A 39 NKAEDFQDRFIDHVETTLARSLYNCDDMVAYEAASMSIRDNLVIDWNKTQQKFTTRDPKRVYYLSLEFLMGRALDNALIN 118 (879)
T ss_dssp CSHHHHHHHHHHHHHTTSCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECSCCCCBCHHHHHHHS
T ss_pred cCHHHHHHHHHHHHHHHhCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCeEEEEchhhhhhhHHHHHHHh
Confidence 77899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcHHHH-------------HHHHHHcCCChHHHHhhccccCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCCcceE
Q 003742 107 LDIQNAY-------------ADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQ 173 (799)
Q Consensus 107 Lgi~~~~-------------~eaL~~lg~~l~~i~~~E~D~~LgnGGLGrLAacfldS~A~LglP~~G~GlrY~~G~F~Q 173 (799)
||+++++ ++||++||+|+++|+++|+||||||||||||||||||||||||+|++||||||+||||+|
T Consensus 119 lg~~~~~~~~~~~~~~~~~~~~al~~lg~~l~~~~~~E~da~LGnGGLGrLAacfLdS~AtLglP~~GyGlrY~~G~F~Q 198 (879)
T 1ygp_A 119 MKIEDPEDPAASKGKPREMIKGALDELGFKLEDVLDQEPDAGLGNGGLGRLAACFVDSMATEGIPAWGYGLRYEYGIFAQ 198 (879)
T ss_dssp CCC------------CHHHHHHHHHHHTCCHHHHHTTCCCBCSCCSHHHHHHHHHHHHHHHTTCCEEEEEECCSSCSCEE
T ss_pred cCChhhhchhhccccchhHHHHHHHHcCCCHHHHHhcCCCCCcCCCcHHHHHHHHHHHHHhCCCCeEEEEeeecCCceEE
Confidence 9999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCceeeccccccccCCCcccccCCeeEEEEeCCeEEE--cC-CCce--eeeCCeEEEEEEeeeccCCCCCCceEEEE
Q 003742 174 KITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMV--NP-NGTR--KWVGGEVVQAVAYDIPIPGYKTKNTISLR 248 (799)
Q Consensus 174 ~I~dG~QvE~pd~Wl~~g~pwe~~r~~~~~~V~f~G~v~~--~~-~g~~--~w~~~~~v~av~yd~pi~gy~~~~~n~lR 248 (799)
+|.||||+|.||+||.+|||||++|++.+++|+|+|+|+. +. +|+. +|++++.|+|||||+|||||+|+++|+||
T Consensus 199 ~i~dG~Q~E~pd~Wl~~g~pwe~~r~~~~~~V~f~G~v~~~~~~~~G~~~~~w~~~~~v~av~yD~Pi~Gy~~~~~n~lR 278 (879)
T 1ygp_A 199 KIIDGYQVETPDYWLNSGNPWEIERNEVQIPVTFYGYVDRPEGGKTTLSASQWIGGERVLAVAYDFPVPGFKTSNVNNLR 278 (879)
T ss_dssp EEETTEEEEECCCTTTTCCTTCEEEEEEEEEEEESCEEECC----CTTSCCEEECSEEEEEEEEEEEEECSSCCCEEEEE
T ss_pred EeeCCeeEEeccchhccCCcccccCCCceEEEeeCCEEeeccccCCCcceeEeeCCcEEEEEEccccccCcCCCceEEEE
Confidence 9999999999999999999999999999999999999983 33 6754 49999999999999999999999999999
Q ss_pred EEeeccCCccccccccCcchhhhHhhhhhhhhccccccccCCCcchhhhhhhhhhhhhhhchHHHHHHHHHHccCCcccc
Q 003742 249 LWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWS 328 (799)
Q Consensus 249 LW~a~v~~~~~~l~~~~~g~y~~a~~~~~~~~~It~~LYp~D~~~~Gk~lRLkQEyfl~~a~lqdiir~~~~~~g~~~l~ 328 (799)
||+|+++ ..|+|..||.|||.+|+++++.+|+||++|||+|++++||+|||||||||||||+|||||+|++.+| +|+
T Consensus 279 LW~a~~~-~~f~l~~fn~gdy~~a~~~~~~~e~IT~vLYp~D~~~~GkeLRLkQEyfl~sa~lqdilr~~~~~~~--~l~ 355 (879)
T 1ygp_A 279 LWQARPT-TEFDLNKFNNGDYKNSVAQQQRAESITAVLYPNDNFAQGKELRLKQQYFWCAASLHDILRRFKKSKR--PWT 355 (879)
T ss_dssp EEEEEES-CSCCHHHHHTTCHHHHTHHHHHHHHHHHSSSCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC--CGG
T ss_pred EEEeccC-cccchhhccCccHhHhhhChHhhhchhccCCCCCCCccchhhheehhhhhhhhHHHHHHHHHHHhCC--Chh
Confidence 9999955 4899999999999999999999999999999999999999999999999999999999999998884 799
Q ss_pred CCCCceeEEeCCCcccccHHHHHHHHHhhcCCCHHHHHHHhccceEeeecCCCcchhccccHHHHHHhchhHHHHHHHHH
Q 003742 329 EFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEID 408 (799)
Q Consensus 329 ~l~~~~~ihlNdtHpalai~ElmR~L~de~gl~~~~A~~iv~~~~~yTnHT~~pealE~w~~~l~~~llpr~~~ii~~In 408 (799)
+||++++|||||||||||||||||+|+|++|++|++||+||+++|+||||||||||||+||++||+++||||++||++||
T Consensus 356 ~l~~~~~ihlNDtHpalai~ELmR~L~d~~gl~wd~Aw~iv~~t~~yTnHT~lpealE~wpv~l~~~lLpr~~~II~ein 435 (879)
T 1ygp_A 356 EFPDQVAIQLNDTHPTLAIVELQRVLVDLEKLDWHEAWDIVTKTFAYTNHTVMQEALEKWPRRLFGHLLPRHLEIIYDIN 435 (879)
T ss_dssp GHHHHEEEEEESSTTTHHHHHHHHHHHHTTCCCHHHHHHHHHHHEEEEECCCSGGGSCEEEHHHHHHHCHHHHHHHHHHH
T ss_pred hcCCceEEEccCCcHHHHHHHHHHHHhhhcCCCHHHHHHHHHHheeeecCcCchHhhccCCHHHHHHHCCcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCChhhhccccccccCCCCC--eeeEeeeccccCcchHHHHHHhHHHHHHhhhhhhhhhcCC-Cccccc
Q 003742 409 KRFIAMVRSTRSDLESKIPSMCILDNNPKKP--VVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPN-KLQNKT 485 (799)
Q Consensus 409 ~~f~~~~~~~~~~~~~~~~~l~ii~~~~~~~--~v~Ma~Lai~~S~~vNGVS~lH~ei~k~~~f~~f~~l~P~-kf~niT 485 (799)
++|++.+++++|.|.+++.+||||++ +++ +|+||+||+++||+|||||+|||+|+|++||++|+++||+ ||+|||
T Consensus 436 ~~f~~~~~~~~~~d~~~~~~l~ii~~--~~~~~~v~MA~LAi~~S~~vNGVs~LH~ev~k~~~f~df~~l~P~~kf~n~T 513 (879)
T 1ygp_A 436 WFFLEDVAKKFPKDVDLLSRISIIEE--NSPERQIRMAFLAIVGSHKVNGVVELHSELIKTTIFKDFIKFYGPSKFVNVT 513 (879)
T ss_dssp HHHHHHHHHHSTTCTHHHHHHCSEEC--CSSSCEEEHHHHHHHHEEEEEESSHHHHHHHHHTTTHHHHHHHCGGGEEECC
T ss_pred HHHHHHHHHHcCCCHHHHHhcceecc--CCCcceeehHHHHHHhcCceeEehHHHHHHHHHHHhHHHHHhCCCCcccCcC
Confidence 99999999999999999999999987 433 8999999999999999999999999999999999999999 999999
Q ss_pred cccCccccccccChhHHHHHHHhcCC--cccccCcchHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHh-CCcCC-
Q 003742 486 NGITPRRWLRFCNPELSKIITKWLKT--DQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVT-GVTID- 561 (799)
Q Consensus 486 NGV~~rrWl~~~np~L~~Li~~~ig~--~~W~~d~~~l~~l~~~~~D~~~~~~~~~vk~~nK~~L~~~i~~~~-g~~ld- 561 (799)
||||+|||+.+|||+|++||+++||+ ++|.+++++|++|+++++|++|+++|+++|++||++|++||++++ |+.||
T Consensus 514 NGVt~rrWl~~~Np~L~~Li~~~iG~~~~~W~~d~~~L~~l~~~~~D~~f~~~l~~iK~~nK~~La~~i~~~~~g~~ld~ 593 (879)
T 1ygp_A 514 NGITPRRWLKQANPSLAKLISETLNDPTEEYLLDMAKLTQLEKYVEDKEFLKKWNQVKLNNKIRLVDLIKKENDGVDIIN 593 (879)
T ss_dssp CCBCHHHHTTTTCHHHHHHHHHHTTCTTCGGGTCGGGGGGGGGGGGCTHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSC
T ss_pred CCcCCchhhhhcCHHHHHHHHHhcCCChhhhhhCHHHHHHHHhhCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEecC
Confidence 99999999999999999999999992 399999999999999999999999999999999999999999999 99999
Q ss_pred ----CCceeeccccccccchhhhhhhhhHHHHHHHHHhcC------cCC-CCCCCCeEEEEeccCCCCCHHHHHHHHHHH
Q 003742 562 ----PNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMS------PQE-RKKTTPRTIMIGGKAFATYTNAKRIVKLVN 630 (799)
Q Consensus 562 ----p~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~------~~~-~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~ 630 (799)
|++|||||||||||||||+||+|++++||.+|++ | |+. +.+++||||||||||||+|++||.|||+|+
T Consensus 594 ~~~~p~sLfdvq~KR~heYKRq~LniL~ii~ry~~Ik~-~~~~~~~p~~~~~~~~P~~~IFaGKAaP~y~~aK~iIklI~ 672 (879)
T 1ygp_A 594 REYLDDTLFDMQVKRIHEYKRQQLNVFGIIYRYLAMKN-MLKNGASIEEVARKYPRKVSIFGGKSAPGYYMAKLIIKLIN 672 (879)
T ss_dssp STTGGGCEEEEEESCCCGGGTHHHHHHHHHHHHHHHHH-HHHTTCCHHHHHHHSCCEEEEEECCCCTTCHHHHHHHHHHH
T ss_pred CCCCCCeeeeeeeehhhHhHHHHHHHHHHHHHHHHHHh-CccccCCCcccccCCCCeEEEEeccCCCCcHHHHHHHHHHH
Confidence 9999999999999999999999999999999998 6 541 112589999999999999999999999999
Q ss_pred HHhhhhcCCcccCCcceEEEecCCChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccCcchhhhhhcc
Q 003742 631 DVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIG 710 (799)
Q Consensus 631 ~va~~in~Dp~~~~~lkVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vg 710 (799)
++|++|||||+|+++|||||||||||++||+|||||||||||||||+||||||||||||||||||||||||||||.++||
T Consensus 673 ~va~~iN~Dp~v~~~LKVVFlenY~VslAe~iipaaDvseqistag~EASGTsnMKfalNGaLtlgtlDGanvEi~e~vG 752 (879)
T 1ygp_A 673 CVADIVNNDESIEHLLKVVFVADYNVSKAEIIIPASDLSEHISTAGTEASGTSNMKFVMNGGLIIGTVDGANVEITREIG 752 (879)
T ss_dssp HHHHHHTTCGGGTTSEEEEEETTCCHHHHHHHGGGCSEEEECCCTTCCSCCHHHHHHHTTTCEEEEESCTHHHHHHHHHC
T ss_pred HHHHHhccChhhCCceEEEEeCCCCHHHHHHhhhhhhhhhhCCCCCccccCchhhHHHHcCCeeeecccchhHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhhccccccchhhhhhccCCCCCCCChHHHHHHHHHHcCCCCCCC---cHHHHHHHhhCCCCCCCCeeeecCccHHH
Q 003742 711 EENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYD---YNPLLDSLEGNTGYGRGDYFLVGYDFPSY 787 (799)
Q Consensus 711 ~en~~iFg~~~~ev~~l~~~~~y~~~~~~~~i~~v~d~i~~g~f~~~~---f~~i~~~l~~~~~~~~~D~y~vl~Df~sy 787 (799)
+||+||||++++||.+++.++.+..|+.+|.+++|+|+|.+|+|++++ |++||++|+.+ +|+|+|++||+||
T Consensus 753 ~eN~fiFG~~~~ev~~~~~~~~~~~y~~~~~l~~v~d~i~~g~f~~~~~~~f~~l~~~L~~~-----~D~y~vl~Df~sY 827 (879)
T 1ygp_A 753 EDNVFLFGNLSENVEELRYNHQYHPQDLPSSLDSVLSYIESGQFSPENPNEFKPLVDSIKYH-----GDYYLVSDDFESY 827 (879)
T ss_dssp GGGSEEESCCHHHHHHHHHHHHHSCCCCCHHHHHHHHHTC--CCCTTSTTTTHHHHHHHHHS-----TTTTCHHHHHHHH
T ss_pred cccEEEccCCHHHHHHHHHhCchhccCCCHHHHHHHHHHhcCCCCCCChHHHHHHHHHHhcC-----CCeEEEeccHHHH
Confidence 999999999999999999987444578899999999999999998765 99999999986 7999999999999
Q ss_pred HHHHHHHHhhhC
Q 003742 788 LEAQDRVDQAYK 799 (799)
Q Consensus 788 ~~~q~~v~~~y~ 799 (799)
++||++|+++|+
T Consensus 828 ~~~q~~v~~~Y~ 839 (879)
T 1ygp_A 828 LATHELVDQEFH 839 (879)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc
Confidence 999999999994
No 2
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...
Probab=100.00 E-value=1.6e-226 Score=1963.46 Aligned_cols=767 Identities=47% Similarity=0.802 Sum_probs=723.4
Q ss_pred ccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCceEEEEEhhhccc
Q 003742 18 IPAAANPLANEPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQG 97 (799)
Q Consensus 18 ~~~~~~~~~~~~~~~k~~~~~~l~~~~g~~~~~at~~~~y~Ala~~vRD~l~~~w~~t~~~~~~~~~k~vyYlSmEfl~G 97 (799)
|++.......++++|+++|.+||++++|+++.+||+.++|.|||.+|||+++++|.+|++.+.+.++|+|||||||||||
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~y~al~~~vrd~~~~~w~~t~~~~~~~~~k~vyYlS~Efl~g 81 (824)
T 2gj4_A 2 ISVRGLAGVENVTELKKNFNRHLHFTLVKDRNVATPRDYYFALAHTVRDHLVGRWIRTQQHYYEKDPKRIYYLSLEFYMG 81 (824)
T ss_dssp CGGGCCCCHHHHHHHHHHHHHHHHHTTCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECSCEEEE
T ss_pred cccccccccccHHHHHHHHHHHHHHHhCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEchhhcch
Confidence 44444322235678999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhHHhhccCcHHHHHHHHHHcCCChHHHHhhccccCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCCcceEEecC
Q 003742 98 RTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITK 177 (799)
Q Consensus 98 r~L~nnL~NLgi~~~~~eaL~~lg~~l~~i~~~E~D~~LgnGGLGrLAacfldS~A~LglP~~G~GlrY~~G~F~Q~I~d 177 (799)
|+|+|||+|||+++++++||+++|+|+++|+|+|+||||||||||||||||||||||||+|++||||||+||||+|+|+|
T Consensus 82 r~L~n~l~nlg~~~~~~~~l~~~g~~l~~i~~~E~d~~LgnGGLGrLAacfldS~AtL~~P~~G~Gi~Y~~G~F~Q~i~d 161 (824)
T 2gj4_A 82 RTLQNTMVNLALENACDEATYQLGLDMEELEEIEEDAGLGNGGLGRLAACFLDSMATLGLAAYGYGIRYEFGIFNQKICG 161 (824)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHTTCCHHHHHTTSCCEEECCSHHHHHHHHHHHHHHHTTCCEEEEEECCSBCSCEEEEET
T ss_pred hhhHHHHHHCCCHHHHHHHHHHhCCCHHHHHhcCCCcCcCCCcHHHHHHHHHHHHHhCCCCeEEEeecccCCCeeEEeeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeeccccccccCCCcccccCCeeEEEEeCCeEEEcCCCceeeeCCeEEEEEEeeeccCCCCCCceEEEEEEeeccCCc
Q 003742 178 QGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAE 257 (799)
Q Consensus 178 G~QvE~pd~Wl~~g~pwe~~r~~~~~~V~f~G~v~~~~~g~~~w~~~~~v~av~yd~pi~gy~~~~~n~lRLW~a~v~~~ 257 (799)
|||+|.||+||..|||||++|++.+++|+|+|+|+.+.+|. +|++++.|+|||||+|||||+|++||+||||+|+ +++
T Consensus 162 G~Q~E~~d~Wl~~~~pwe~~r~~~~~~V~f~g~v~~~~~g~-~w~~~~~v~av~yD~pi~Gy~~~~vn~lRlW~a~-~~~ 239 (824)
T 2gj4_A 162 GWQMEEADDWLRYGNPWEKARPEFTLPVHFYGRVEHTSQGA-KWVDTQVVLAMPYDTPVPGYRNNVVNTMRLWSAK-APN 239 (824)
T ss_dssp TEEEEECCCTTTTCCTTCEECGGGCEEEEESCEEEECSSSE-EEESCEEEEEEEEEEEEECSSSSCEEEEEEEEEE-CCC
T ss_pred CEEEEcCccccccCCcccccCCCceEEEEeCCEEEecCCCc-eecccceEEEeeccCCcCCCCCCceEEEEEEEee-cCc
Confidence 99999999999999999999999999999999998666783 7999999999999999999999999999999999 778
Q ss_pred cccccccCcchhhhHhhhhhhhhccccccccCCCcchhhhhhhhhhhhhhhchHHHHHHHHHHcc-CC-----ccccCCC
Q 003742 258 DFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERK-SG-----RQWSEFP 331 (799)
Q Consensus 258 ~~~l~~~~~g~y~~a~~~~~~~~~It~~LYp~D~~~~Gk~lRLkQEyfl~~a~lqdiir~~~~~~-g~-----~~l~~l~ 331 (799)
.|||..||.|+|..|+.++..+++||++|||+|++++||+|||||||||||||+|||||+|++.+ |. .+|+.||
T Consensus 240 ~f~~~~fn~G~~~~a~~d~~~~enIt~~LYp~D~~~~Gk~lRL~Qeyf~~sa~lqdilr~~~~~~~g~~~~~~~~~~~~~ 319 (824)
T 2gj4_A 240 DFNLKDFNVGGYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKSSKFGCRDPVRTNFDAFP 319 (824)
T ss_dssp ----------CHHHHHHTHHHHHGGGSBCCCCSSCCCCCHHHHHHHHHHHHHHHHHHHHHHHC-----------CGGGHH
T ss_pred ccchhhccCccHHHHHhcccchhhcCcCCCCCCCccchHhHhhhhhhhhhhhHHHHHHHHHHHhccccccccccchhhcC
Confidence 99999999999999999999999999999999999999999999999999999999999998653 21 2688999
Q ss_pred CceeEEeCCCcccccHHHHHHHHHhhcCCCHHHHHHHhccceEeeecCCCcchhccccHHHHHHhchhHHHHHHHHHHHH
Q 003742 332 SKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRF 411 (799)
Q Consensus 332 ~~~~ihlNdtHpalai~ElmR~L~de~gl~~~~A~~iv~~~~~yTnHT~~pealE~w~~~l~~~llpr~~~ii~~In~~f 411 (799)
++++||||||||||++|||||+|+|++|++|++||++|+++|+||||||+|||+|+||++||+++||||++||++||++|
T Consensus 320 ~p~viHlNDtHpal~i~ElmR~l~d~~~l~~d~A~~i~~~~~vfT~HTl~~eglE~wp~~l~~~lLPr~~~ii~~in~~f 399 (824)
T 2gj4_A 320 DKVAIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVLPEALERWPVHLLETLLPRHLQIIYEINQRF 399 (824)
T ss_dssp HHEEEEEESSTTTTHHHHHHHHHHHTSCCCHHHHHHHHHHHEEEECCCCCGGGSCEEEHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CCcEEEccCCchHhHHHHHHHHHHHhcCCCHHHHHHHhcCcEEEEeCCChHHHhhhchHHHHHHhCchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCChhhhccccccccCCCC-CeeeEeeeccccCcchHHHHHHhHHHHHHhhhhhhhhhcCCCccccccccCc
Q 003742 412 IAMVRSTRSDLESKIPSMCILDNNPKK-PVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITP 490 (799)
Q Consensus 412 ~~~~~~~~~~~~~~~~~l~ii~~~~~~-~~v~Ma~Lai~~S~~vNGVS~lH~ei~k~~~f~~f~~l~P~kf~niTNGV~~ 490 (799)
++.++.++|.+.+.+.+|+++++ +. +.||||+|||++||+|||||+||++++|+.+|++|++++|+||+|||||||+
T Consensus 400 ~~~~~~~~~~~~~~~~~~~~i~~--~~~~~vnMa~lai~~S~~VNgVS~lH~e~ik~~~f~~~~~~~p~k~~~iTNGI~~ 477 (824)
T 2gj4_A 400 LNRVAAAFPGDVDRLRRMSLVEE--GAVKRINMAHLCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITP 477 (824)
T ss_dssp HHHHHHHSTTCHHHHHHHCSEEC--SSSCEEEHHHHHHHTCSCEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBCT
T ss_pred HHHHHHHcCCcHHHHHhhhhhhh--cCCCcccHHHHHHHhcCceeeEcHHHHHHHhhHHhHHHHHcChhhcccccCCcCh
Confidence 99999999999999999999986 32 3999999999999999999999999999999999999999999999999999
Q ss_pred cccccccChhHHHHHHHhcCCcccccCcchHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCceeeccc
Q 003742 491 RRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQV 570 (799)
Q Consensus 491 rrWl~~~np~L~~Li~~~ig~~~W~~d~~~l~~l~~~~~D~~~~~~~~~vk~~nK~~L~~~i~~~~g~~ldp~slfd~~~ 570 (799)
|||+.+|||+++++|++.||+ +|.+|++++++|.++.+|++|+++|+++|++||.+|++||++++|+.+||+++||+||
T Consensus 478 rrWl~~~NP~l~~lI~~~ig~-~W~~~~~~l~~L~~y~~d~~~~~~~~~~K~~nK~~la~~l~~~~Gl~vdpd~l~~g~v 556 (824)
T 2gj4_A 478 RRWLVLCNPGLAEIIAERIGE-EYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDVQV 556 (824)
T ss_dssp CCCCCCTCHHHHHHHHHHHCS-GGGGCGGGGGGGGGGTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEE
T ss_pred hhhcccCCHhHHHHHHHhcCc-hhhhCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEeee
Confidence 999999999999999999994 9999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCCcccCCcceEEE
Q 003742 571 KRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVF 650 (799)
Q Consensus 571 kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~~~~~lkVvF 650 (799)
|||||||||+||+|++++||.+|++ +|.. +++|+||||||||||+|++||+|||+|+++|+++||||+++++|||||
T Consensus 557 kRl~eYKRq~L~~l~~i~~~~~i~~-~~~~--~~~p~q~If~GKA~P~y~~aK~iIkli~~va~~in~Dp~v~~~lKVvF 633 (824)
T 2gj4_A 557 KRIHEYKRQLLNCLHVITLYNRIKK-EPNK--FVVPRTVMIGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIF 633 (824)
T ss_dssp SCCCGGGTHHHHHHHHHHHHHHHHH-CTTS--CCCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCTTTGGGEEEEE
T ss_pred ecchhhcchhhHHHHHHHHHHHHHh-CCCC--CCCCEEEEEEEeCCHhHHHHHHHHHHHHHHHHHhccCcccCCceEEEE
Confidence 9999999999999999999999998 7763 678999999999999999999999999999999999999999999999
Q ss_pred ecCCChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccCcchhhhhhccccchhhccccccchhhhhhc
Q 003742 651 VPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKE 730 (799)
Q Consensus 651 lenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vg~en~~iFg~~~~ev~~l~~~ 730 (799)
+|||||++|++|+||||||+|||+||+||||||||||||||+|||||+|||||||.++||.+|+|+||.+++||..++.+
T Consensus 634 l~nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MKamlNGaLtigtlDGanvEi~e~vG~~Ngf~FG~~~~ev~~l~~~ 713 (824)
T 2gj4_A 634 LENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVEDVDRLDQR 713 (824)
T ss_dssp ETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECSCCHHHHHHHHHH
T ss_pred ECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCceEEEEecCccchhhhccCCCCEEEeCCcHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888666
Q ss_pred cCCCC---CCCChHHHHHHHHHHcCCCCCCC---cHHHHHHHhhCCCCCCCCeeeecCccHHHHHHHHHHHhhhC
Q 003742 731 REDGL---FKPDPRFEEAKQFIRSGAFGSYD---YNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYK 799 (799)
Q Consensus 731 ~~y~~---~~~~~~i~~v~d~i~~g~f~~~~---f~~i~~~l~~~~~~~~~D~y~vl~Df~sy~~~q~~v~~~y~ 799 (799)
+ |++ |+.+|.+++|++.|.+|.|++++ |.+||++|+. +|+|||++||+||++||++|++.|+
T Consensus 714 ~-~~a~~~Y~~~~~l~~v~d~i~~g~fs~~~~~~y~~ly~~l~~------~D~~~~~~Df~~y~~~q~~v~~~y~ 781 (824)
T 2gj4_A 714 G-YNAQEYYDRIPELRQIIEQLSSGFFSPKQPDLFKDIVNMLMH------HDRFKVFADYEEYVKCQERVSALYK 781 (824)
T ss_dssp C-CCHHHHHHHCHHHHHHHHHHHHTTTCTTSTTTTHHHHHHHHH------CCTTCTGGGHHHHHHHHHHHHHHHT
T ss_pred C-CCHHHHhcCCHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHc------CChhhhhhhHHHHHHHHHHHHHhhc
Confidence 5 776 56689999999999999998665 9999999998 4999999999999999999999884
No 3
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*
Probab=100.00 E-value=1.1e-224 Score=1942.55 Aligned_cols=750 Identities=43% Similarity=0.731 Sum_probs=725.2
Q ss_pred CCCHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCceEEEEEhhhccccchhHHhh
Q 003742 26 ANEPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTLTNAIG 105 (799)
Q Consensus 26 ~~~~~~~k~~~~~~l~~~~g~~~~~at~~~~y~Ala~~vRD~l~~~w~~t~~~~~~~~~k~vyYlSmEfl~Gr~L~nnL~ 105 (799)
..++++|+++|.+||++++|+++.+||+.++|.|||.+|||+++++|.+|++ .++|+||||||||||||+|+|||+
T Consensus 4 ~~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~y~al~~~~rd~l~~~w~~t~~----~~~k~v~Y~S~Efl~gr~L~n~l~ 79 (796)
T 1l5w_A 4 IFNDKQFQEALSRQWQRYGLNSAAEMTPRQWWLAVSEALAEMLRAQPFAKPV----ANQRHVNYISMEFLIGRLTGNNLL 79 (796)
T ss_dssp CCCHHHHHHHHHHHHHHTTCSSGGGCCHHHHHHHHHHHHHHHHHTSCCCCCC----SSCCEEEEECSCCCCCCCHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHhCCChHhCCHHHHHHHHHHHHHHHHHHHHHHhcc----cCCceEEEEehHHhHHHHHHHHHH
Confidence 3578899999999999999999999999999999999999999999999986 467999999999999999999999
Q ss_pred ccCcHHHHHHHHHHcCCChHHHHhhccccCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCCcceEEecCCceeeccc
Q 003742 106 SLDIQNAYADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAE 185 (799)
Q Consensus 106 NLgi~~~~~eaL~~lg~~l~~i~~~E~D~~LgnGGLGrLAacfldS~A~LglP~~G~GlrY~~G~F~Q~I~dG~QvE~pd 185 (799)
|||+++++++||++||+|+++|+++|+||||||||||||||||||||||||+|++||||||+||||+|+|.||||+|.||
T Consensus 80 nlg~~~~~~~~l~~~g~~l~~~~~~E~d~~LgnGGLGrLAacfldS~a~l~~p~~G~Gi~Y~~G~F~Q~i~dG~Q~E~~d 159 (796)
T 1l5w_A 80 NLGWYQDVQDSLKAYDINLTDLLEEEIDPALGNGGLGRLAACFLDSMATVGQSATGYGLNYQYGLFRQSFVDGKQVEAPD 159 (796)
T ss_dssp HHTCHHHHHHHHHTTTCCHHHHHTTCCCCCCCCSHHHHHHHHHHHHHHHTTCCEEEEEECCSSCSCEEEEETTEEEEECC
T ss_pred hcCcHHHHHHHHHHcCCCHHHHHhcCCCcCcCCCcHHHHHHHHHHHHHhCCCCeEEEeeeecCCceeEEecCCeeEEecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCcccccCCeeEEEEeCCeEEEcCCCceeeeCCeEEEEEEeeeccCCCCCCceEEEEEEeeccCCccccccccC
Q 003742 186 DWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFN 265 (799)
Q Consensus 186 ~Wl~~g~pwe~~r~~~~~~V~f~G~v~~~~~g~~~w~~~~~v~av~yd~pi~gy~~~~~n~lRLW~a~v~~~~~~l~~~~ 265 (799)
+|+..|+|||++|++.+|+|+|+|+++. + + +|++++.|+|||||+|||||+|+++|+||||+|+++. .|+|..||
T Consensus 160 ~wl~~~~pwe~~r~~~~~~V~f~g~~~~--~-~-~w~~~~~v~av~yd~pi~Gy~~~~~n~lrlW~a~~~~-~f~l~~fn 234 (796)
T 1l5w_A 160 DWHRSNYPWFRHNEALDVQVGIGGKVTK--D-G-RWEPEFTITGQAWDLPVVGYRNGVAQPLRLWQATHAH-PFDLTKFN 234 (796)
T ss_dssp CCCGGGCTTCEECGGGCEEEEESCEECT--T-S-CEECSEEEEEEEEEEEEECSSSCCEEEEEEEEEECSS-CCCHHHHH
T ss_pred ccccCCCcceeecCCcEEEEeeCCEEee--c-c-eecCCceEEEEEecccccCCCCCceEEEEEEEeccCc-ccChhhcC
Confidence 9999999999999999999999999983 3 4 7999999999999999999999999999999999554 79999999
Q ss_pred cchhhhHhhhhhhhhccccccccCCCcchhhhhhhhhhhhhhhchHHHHHHHHHHccCCccccCCCCceeEEeCCCcccc
Q 003742 266 DGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTL 345 (799)
Q Consensus 266 ~g~y~~a~~~~~~~~~It~~LYp~D~~~~Gk~lRLkQEyfl~~a~lqdiir~~~~~~g~~~l~~l~~~~~ihlNdtHpal 345 (799)
.|+|..|+++++.+|+||++|||+|++++||+||||||||||+||+|+|+|+|++.++ +|+.||++++||||||||||
T Consensus 235 ~gdy~~a~~~~~~~~~It~~LYp~D~~~~Gk~lRL~Qe~ff~~a~lq~ilr~~~~~~~--~~~~l~~p~viHlNDtHpal 312 (796)
T 1l5w_A 235 DGDFLRAEQQGINAEKLTKVLYPNDNAFEGKKLRLMQQYFQCACSVADILRRHHLAGR--KLHELADYEVIQLNDTHPTI 312 (796)
T ss_dssp TTCTTGGGHHHHHHHGGGTCSSCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC--CGGGHHHHEEEEEESSTTTT
T ss_pred CccHhhhhhchHhHhhhhhcCcCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHcCC--ChhhcCCccEEEecCCccHh
Confidence 9999999999999999999999999999999999999999999999999999998874 79999999999999999999
Q ss_pred cHHHHHHHHHhhcCCCHHHHHHHhccceEeeecCCCcchhccccHHHHHHhchhHHHHHHHHHHHHHHHHHHhCCCChhh
Q 003742 346 AIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESK 425 (799)
Q Consensus 346 ai~ElmR~L~de~gl~~~~A~~iv~~~~~yTnHT~~pealE~w~~~l~~~llpr~~~ii~~In~~f~~~~~~~~~~~~~~ 425 (799)
++|||||+|+|++|++|++||+||+++|+||||||+|||+|+||++||+++||||++||++||.+|+++++.++|.|.+.
T Consensus 313 ~i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~egle~wp~~l~~~~lpr~~~ii~~I~~~f~~~~~~~~~~~~~~ 392 (796)
T 1l5w_A 313 AIPELLRVLIDEHQMSWDDAWAITSKTFAYTNHTLMPEALERWDVKLVKGLLPRHMQIINEINTRFKTLVEKTWPGDEKV 392 (796)
T ss_dssp HHHHHHHHHHHHSCCCHHHHHHHHTTTEEEECCCCSGGGSCEEEHHHHHHHCHHHHHHHHHHHHHHHHHHHHHSTTCHHH
T ss_pred HHHHHHHHHhhhcCCCHHHHHHHhhccEEEEecCCcHhhhhcCCHHHHHHHhHHHHHHHhccCHHHHHHHHHhcCCcHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccccccCCCCCeeeEeeeccccCcchHHHHHHhHHHHHHhhhhhhhhhcCCCccccccccCccccccccChhHHHHH
Q 003742 426 IPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKII 505 (799)
Q Consensus 426 ~~~l~ii~~~~~~~~v~Ma~Lai~~S~~vNGVS~lH~ei~k~~~f~~f~~l~P~kf~niTNGV~~rrWl~~~np~L~~Li 505 (799)
+.+++++++ + .||||+|||++||+|||||++|++++|+.+|++|+++||+||+|||||||+|||+.+|||+++++|
T Consensus 393 ~~~~~i~~~--~--~vnMa~lai~~S~~VNgVS~lH~e~ik~~~f~~~~~~~p~k~~~iTNGI~~rrWl~~~NP~l~~li 468 (796)
T 1l5w_A 393 WAKLAVVHD--K--QVHMANLCVVGGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTNGITPRRWIKQCNPALAALL 468 (796)
T ss_dssp HHHHCSEET--T--EEEHHHHHHHHSSEEEESSHHHHHHHHHTTSHHHHHHCGGGEEECCCCBCHHHHTTTTCHHHHHHH
T ss_pred HhhhhcccC--C--cccHHHHHHHhcCccccccHHHHHHHHhHHhhHHHHhCccccCCCcCCCcHHHhhcccCHhHHHHH
Confidence 999999876 3 899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCcccccCcchHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCceeeccccccccchhhhhhhhh
Q 003742 506 TKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILG 585 (799)
Q Consensus 506 ~~~ig~~~W~~d~~~l~~l~~~~~D~~~~~~~~~vk~~nK~~L~~~i~~~~g~~ldp~slfd~~~kR~heYKRq~Lnil~ 585 (799)
++.+| ++|.+|++.|++|+++++|++|+++|+++|++||++|++||++++|+.+||+++||+|||||||||||+||+|+
T Consensus 469 ~~~~g-~~w~~d~~~l~~l~~~~~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~~~~vkRl~eYKRq~Lnil~ 547 (796)
T 1l5w_A 469 DKSLQ-KEWANDLDQLINLEKFADDAKFRQQYREIKQANKVRLAEFVKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLH 547 (796)
T ss_dssp HHHCS-SCCTTCGGGGGGGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHH
T ss_pred HHhcC-cccccCHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEeeeecchhhcccCEeHHH
Confidence 99999 49999999999999999999999998899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCCcccCCcceEEEecCCChhhhhhcccc
Q 003742 586 AIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPG 665 (799)
Q Consensus 586 ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~~~~~lkVvFlenY~vslAe~lipa 665 (799)
+++||.+||+ ||.. +++|+||||||||||+|++||.|||+|+++|++|||||+++++|||||+|||||++|++|+||
T Consensus 548 ii~~~~~i~~-~~~~--~~~p~q~If~GKA~P~y~~aK~iIk~i~~va~~in~Dp~~~~~lKVvfl~nY~vslA~~I~~g 624 (796)
T 1l5w_A 548 ILALYKEIRE-NPQA--DRVPRVFLFGAKAAPGYYLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPA 624 (796)
T ss_dssp HHHHHHHHHT-CTTC--CCCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTGGGEEEEECSSCCHHHHHHHGGG
T ss_pred HHHHHHHHhc-CCCC--CCCCeEEEEEecCChhHHHHHHHHHHHHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhh
Confidence 9999999998 7764 578999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccCCCccccCCCcccceeccCceEEEeccCcchhhhhhccccchhhccccccchhhhhhccCCCC---CCCChHH
Q 003742 666 SELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGL---FKPDPRF 742 (799)
Q Consensus 666 ~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vg~en~~iFg~~~~ev~~l~~~~~y~~---~~~~~~i 742 (799)
||||+|||+||+||||||||||||||+|||||||||||||.+++|++|+|+||.+++||.+++..+ |+| |+.+|.+
T Consensus 625 aDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanvEi~e~vG~~NgF~FG~~~~ev~~l~~~~-y~a~~~y~~~~~~ 703 (796)
T 1l5w_A 625 ADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEKVGEENIFIFGHTVEQVKAILAKG-YDPVKWRKKDKVL 703 (796)
T ss_dssp CSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECSCCHHHHHHHHHHC-CCHHHHHHHCHHH
T ss_pred cceeecCCCCCCCCCchHHHHHHHcCCeeecCcCCeeeehhhccCCCcEEEecCCHHHHHHHHHcc-cCHHHHhhcCHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999887 887 4568899
Q ss_pred HHHHHHHHcCCCCCCC---cHHHHHHHhhCCCCCCCCeeeecCccHHHHHHHHHHHhhhC
Q 003742 743 EEAKQFIRSGAFGSYD---YNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYK 799 (799)
Q Consensus 743 ~~v~d~i~~g~f~~~~---f~~i~~~l~~~~~~~~~D~y~vl~Df~sy~~~q~~v~~~y~ 799 (799)
++|++.+.+|.|++.+ |.+||++|+.+ | +|+|+|++||+||++||++|+++|+
T Consensus 704 ~~vvd~~~~g~fs~~~~~~y~~Ly~~L~~~-~---~D~~~v~~Df~~y~~~q~~v~~~Y~ 759 (796)
T 1l5w_A 704 DAVLKELESGKYSDGDKHAFDQMLHSIGKQ-G---GDPYLVMADFAAYVEAQKQVDVLYR 759 (796)
T ss_dssp HHHHHHHHHTTTTTTCTTTTHHHHHHTSTT-T---CCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCCcHHHHHHHHHHHhcc-C---CCceeehhhHHHHHHHHHHHHHHhh
Confidence 9999999999998765 99999999861 1 4999999999999999999999984
No 4
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}
Probab=100.00 E-value=2.5e-221 Score=1914.20 Aligned_cols=742 Identities=44% Similarity=0.722 Sum_probs=712.5
Q ss_pred CCHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCceEEEEEhhhccccchhHHhhc
Q 003742 27 NEPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTLTNAIGS 106 (799)
Q Consensus 27 ~~~~~~k~~~~~~l~~~~g~~~~~at~~~~y~Ala~~vRD~l~~~w~~t~~~~~~~~~k~vyYlSmEfl~Gr~L~nnL~N 106 (799)
.++++|+++|.+||++++|+++.+||+.++|.|||.+|||++.++|.+|++.+.+. |+||||||||||||+|+|||+|
T Consensus 4 ~~~~~~~~~~~~~l~~~~~~~~~~a~~~~~y~al~~~vrd~l~~~w~~t~~~~~~~--k~v~Y~S~Efl~gr~L~n~l~n 81 (796)
T 2c4m_A 4 EKQPLPAALVGSHVRAAAGTPADLATDRKFWTGLSRAVQERIADDWERTREAYGAA--RQQHYFSAEFLMGRALLNNLTN 81 (796)
T ss_dssp --CCSCHHHHHHHHHHHHSSCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS--CEEEEECSCCCCBCSHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHhCCChHHCCHHHHHHHHHHHHHHHHHHHHHHhhhhhccC--CeEEEEehhhcchhhhhhHHHh
Confidence 34567999999999999999999999999999999999999999999999987654 9999999999999999999999
Q ss_pred cCcHHHHHHHHHHcCCChHHHHhhccccCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCCcceEEecCCceeecccc
Q 003742 107 LDIQNAYADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAED 186 (799)
Q Consensus 107 Lgi~~~~~eaL~~lg~~l~~i~~~E~D~~LgnGGLGrLAacfldS~A~LglP~~G~GlrY~~G~F~Q~I~dG~QvE~pd~ 186 (799)
||+++++++||+++|+|+++|+++|+||||||||||||||||||||||||+|++||||||+||||+|+|.||||+|.||+
T Consensus 82 lg~~~~~~~~l~~~g~~l~~~~~~E~d~~LgnGGLGrLAac~ldS~a~l~~p~~G~Gl~Y~~G~F~Q~i~dG~Q~E~~d~ 161 (796)
T 2c4m_A 82 LGLVDEAAAATRELGHELTDILEIENDAALGNGGLGRLAACFLDSAVTQDYPVTGYGLLYRFGLFRQSFNEGFQVEKPDP 161 (796)
T ss_dssp TTCHHHHHHHHHHTTCCHHHHHTTCCCBCCCCSHHHHHHHHHHHHHHHTTCCEEEEEECCSSCSCEEEEETTEEEEECCC
T ss_pred cccHHHHHHHHHHcCCCHHHHHhhccccccCCCcHHHHHHHHHHHHHhCCCCeEEEeecccCCCeEEEeeCCEEEeeCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCcccccCCeeEEEEeCCeEEEcCCCceeeeCCeEEEEEEeeeccCCCCCCceEEEEEEeeccCCccccccccCc
Q 003742 187 WLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFND 266 (799)
Q Consensus 187 Wl~~g~pwe~~r~~~~~~V~f~G~v~~~~~g~~~w~~~~~v~av~yd~pi~gy~~~~~n~lRLW~a~v~~~~~~l~~~~~ 266 (799)
|+..|+|||++|++.+|+|+|+|+ +|+|||||+|||||+|+++|+||||+|+ +...|+|..||.
T Consensus 162 wl~~g~pwe~~r~~~~~~V~f~g~---------------~v~a~~yd~pi~gy~~~~~n~lrlW~a~-~~~~f~l~~fn~ 225 (796)
T 2c4m_A 162 WREEEYPFTIRRASDQLVVCFDDM---------------KTRAIPYDMPITGYGTHNVGTLRLWKAE-PWEEFDYDAFNA 225 (796)
T ss_dssp SSSSCCTTSEECGGGCEEEEETTE---------------EEEEEEEEEEECCTTCCCCEEEEEEEEE-ESSSSCHHHHHT
T ss_pred cccCCCceeEecCCcEEEEEeCCE---------------EEEEEEEeccccCcCCCceEEEEEEecc-cccccchhhccC
Confidence 999999999999999999999985 5778999999999999999999999999 445899999999
Q ss_pred chhhhHhhhhhhhhccccccccCCCcchhhhhhhhhhhhhhhchHHHHHHHHHHccCCccccCCCCceeEEeCCCccccc
Q 003742 267 GQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLA 346 (799)
Q Consensus 267 g~y~~a~~~~~~~~~It~~LYp~D~~~~Gk~lRLkQEyfl~~a~lqdiir~~~~~~g~~~l~~l~~~~~ihlNdtHpala 346 (799)
|+|.+|+++++.+|+||++|||+|++++||+||||||||||+||+|||+|+|++.+| +|+.|+++++||||||||||+
T Consensus 226 gdy~~a~~~~~~~~~It~~LYp~D~~~~Gk~lRL~Qe~ff~~a~lq~ilr~~~~~~~--~l~~l~~p~viHlNDtHpal~ 303 (796)
T 2c4m_A 226 QRFTDAIIERERVSDICRVLYPNDTTYEGKKLRVRQQYFFTSASLQAMIQDHLAHHK--DLSNFAEFHSVQLNDTHPVLA 303 (796)
T ss_dssp TCHHHHHHHHHHHHHHHHSSSCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS--CSTTHHHHEEEEEESSTTTTH
T ss_pred cchhhhhhchHhhhchhhcCcCCCCCcchHHHHHHhHHHHHHHHHHHHHHHHHHhCC--ChhhcCCCeEEEeCCChHHhH
Confidence 999999999999999999999999999999999999999999999999999998875 699999999999999999999
Q ss_pred HHHHHHHHHhhcCCCHHHHHHHhccceEeeecCCCcchhccccHHHHHHhchhHHHHHHHHHHHHHHHHHHhCCCChhhh
Q 003742 347 IPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKI 426 (799)
Q Consensus 347 i~ElmR~L~de~gl~~~~A~~iv~~~~~yTnHT~~pealE~w~~~l~~~llpr~~~ii~~In~~f~~~~~~~~~~~~~~~ 426 (799)
+|||||+|+|++|++|++||++|+++|+||||||+|||+|+||++||+++||||++||++||.+|++.+..+ |.+++++
T Consensus 304 i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~egle~wp~~l~~~~lpr~~~ii~~I~~~~~~~~~~~-~~~~~~~ 382 (796)
T 2c4m_A 304 IPELMRLLMDEHDMGWEESWAIVSKTFAYTNHTVLTEALEQWDEQIFQQLFWRVWEIIAEIDRRFRLERAAD-GLDEETI 382 (796)
T ss_dssp HHHHHHHHHHHSCCCHHHHHHHHHHHEEEECCCSSSTTSCEEEHHHHHHHCHHHHHHHHHHHHHHHHHHHHT-TCCHHHH
T ss_pred HHHHHHHHhhhcCCCHHHHHHHhhccEEEEecCchHHHhhhCCHHHHHHHhHHHHHHHcCcCHHHHHHHHhc-CCcHhhh
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred ccccccccCCCCCeeeEeeeccccCcchHHHHHHhHHHHHHhhhhhhhhhcCCCccccccccCccccccccChhHHHHHH
Q 003742 427 PSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIIT 506 (799)
Q Consensus 427 ~~l~ii~~~~~~~~v~Ma~Lai~~S~~vNGVS~lH~ei~k~~~f~~f~~l~P~kf~niTNGV~~rrWl~~~np~L~~Li~ 506 (799)
.+++++.+ + .||||+|||++||+|||||++|++++|+.+|++|+++||+||+|||||||+|||+.+|||+++++|+
T Consensus 383 ~~~~i~~~--~--~vnMa~lai~~S~~VNgVS~lHae~ik~~~f~~~~~~~p~kf~~iTNGI~~rrWl~~~NP~l~~li~ 458 (796)
T 2c4m_A 383 NRMAPIQH--G--TVHMAWIACYAAYSINGVAALHTEIIKAETLADWYALWPEKFNNKTNGVTPRRWLRMINPGLSDLLT 458 (796)
T ss_dssp HHHCSEET--T--EEEHHHHHHHHCSEEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBCTCCCCCTTCHHHHHHHH
T ss_pred hcccceeC--C--cccHHHHHHHhcCceeeccHHHHHHhhhhhhhhHHHcCccccccccCCcchHHhhcccCHhHHHHHH
Confidence 99999876 3 8999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCcccccCcchHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCceeeccccccccchhhhhhhhhH
Q 003742 507 KWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGA 586 (799)
Q Consensus 507 ~~ig~~~W~~d~~~l~~l~~~~~D~~~~~~~~~vk~~nK~~L~~~i~~~~g~~ldp~slfd~~~kR~heYKRq~Lnil~i 586 (799)
+.+|+++|.+|+++|++|+++++|++|+++|+++|++||++|++||++++|+.+||+++||||||||||||||+||+|++
T Consensus 459 ~~~g~~~w~~d~~~l~~l~~~~~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~~~~vkRlheYKRq~Lnil~i 538 (796)
T 2c4m_A 459 RLSGSDDWVTDLDELKKLRSYADDKSVLEELRAIKAANKQDFAEWILERQGIEIDPESIFDVQIKRLHEYKRQLMNALYV 538 (796)
T ss_dssp HHHSSSGGGGCGGGGGGGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEECCCCGGGTHHHHHHHH
T ss_pred HhcCchhhhhChHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCcEEEEeecchhhcccCEeHHHH
Confidence 99994489999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCCcccCCcceEEEecCCChhhhhhccccc
Q 003742 587 IYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGS 666 (799)
Q Consensus 587 i~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~~~~~lkVvFlenY~vslAe~lipa~ 666 (799)
++||.+|++ ||.. +++|+||||||||||+|++||.|||+|+++|++|||||+++++|||||+|||||++|++|+|||
T Consensus 539 i~~~~~i~~-~~~~--~~~p~q~If~GKA~P~y~~aK~iIk~i~~va~~in~dp~~~~~lKVvFl~nY~vslA~~I~~ga 615 (796)
T 2c4m_A 539 LDLYFRIKE-DGLT--DIPARTVIFGAKAAPGYVRAKAIIKLINSIADLVNNDPEVSPLLKVVFVENYNVSPAEHILPAS 615 (796)
T ss_dssp HHHHHHHHT-SCCC--SSCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTTTTEEEEEETTCCHHHHHHHGGGC
T ss_pred HHHHHHHhh-CCCC--CCCCeEEEEEecCCHhHHHHHHHHHHHHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhc
Confidence 999999998 7764 5789999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCccccCCCcccceeccCceEEEeccCcchhhhhhccccchhhccccccchhhhhhccCCCC---CCCChHHH
Q 003742 667 ELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGL---FKPDPRFE 743 (799)
Q Consensus 667 Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vg~en~~iFg~~~~ev~~l~~~~~y~~---~~~~~~i~ 743 (799)
|||+|||+||+||||||||||||||+|||||||||||||.+++|++|+|+||.+++||..++.. |+| |..+|.++
T Consensus 616 Dv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanvEi~e~vG~~NgF~FG~~~~ev~~l~~~--y~a~~~y~~~~~~~ 693 (796)
T 2c4m_A 616 DVSEQISTAGKEASGTSNMKFMMNGALTLGTMDGANVEIVDSVGEENAYIFGARVEELPALRES--YKPYELYETVPGLK 693 (796)
T ss_dssp SEEEECCCTTSCSCCHHHHHHHHTTCEEEEESSTHHHHHHHHHCGGGSEEESCCTTTHHHHHHT--CCHHHHHHHSTTHH
T ss_pred ceeecCCCCCCCCCchHHHHHHHcCCeEEeccCCeEeehhhhcCCCcEEEecCchhhHHHHHHh--hChHHHhhcCHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999876 877 45578999
Q ss_pred HHHHHHHcCCCCCCC---cHHHHHHHhhCCCCCCCCeeeecCccHHHHHHHHHHHhhh
Q 003742 744 EAKQFIRSGAFGSYD---YNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAY 798 (799)
Q Consensus 744 ~v~d~i~~g~f~~~~---f~~i~~~l~~~~~~~~~D~y~vl~Df~sy~~~q~~v~~~y 798 (799)
+|++.|.+|.|++.+ |.+||++|+.+.+.+.+|+|||++||+||++||++|+++|
T Consensus 694 ~vvd~~~~g~fs~~~~~~y~~Ly~~L~~~~~~~~~D~~~~~~Df~~y~~~q~~v~~~y 751 (796)
T 2c4m_A 694 RALDALDNGTLNDNNSGLFYDLKHSLIHGYGKDASDTYYVLGDFADYRETRDRMAADY 751 (796)
T ss_dssp HHHHTTTSSSSCCTTCCHHHHHHHHHHSCCGGGCSCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCCCHHHHHHHHHHHHhcccCCCCCcchhhhhHHHHHHHHHHHHHHH
Confidence 999999999998765 9999999986110011699999999999999999999999
No 5
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=99.35 E-value=1.2e-11 Score=141.28 Aligned_cols=294 Identities=18% Similarity=0.189 Sum_probs=189.6
Q ss_pred CceeEEeCCCcccccHHHHHHHHHhhcCCCHHHHHHHhccceEeeecCCCcchhccccHHHHHHhc-hhHHHHHHHHHHH
Q 003742 332 SKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLL-PRHMEIIEEIDKR 410 (799)
Q Consensus 332 ~~~~ihlNdtHpalai~ElmR~L~de~gl~~~~A~~iv~~~~~yTnHT~~pealE~w~~~l~~~ll-pr~~~ii~~In~~ 410 (799)
..+++|+||-|.+++.+- ++......+. ...-.++||.|++...|. ||.+.+..+. |...
T Consensus 153 ~ddIiH~hDW~t~l~~~~-l~~~~~~~~~-------~~~~~~V~TiHnl~~qg~--~~~~~~~~~~~~~~~--------- 213 (536)
T 3vue_A 153 EDVVFVCNDWHTGPLASY-LKNNYQPNGI-------YRNAKVAFCIHNISYQGR--FAFEDYPELNLSERF--------- 213 (536)
T ss_dssp SCEEEEEESGGGSTHHHH-HHHHTTTTTS-------STTCEEEEEESCTTCCCE--EEGGGGGGGCCCGGG---------
T ss_pred CCEEEEECcchHHHHHHH-HHHhhhhhhh-------hcccceeeeecCcccccc--cchhhhhhcCCchhh---------
Confidence 457899999999998774 4433221111 013468999999877664 3333333211 1100
Q ss_pred HHHHHHHhCCCChhhhccccccccCCCCCeeeEeeeccccCcchHHHHHHhHHHHHHhhhhhhh----hhcCCCcccccc
Q 003742 411 FIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYV----SLWPNKLQNKTN 486 (799)
Q Consensus 411 f~~~~~~~~~~~~~~~~~l~ii~~~~~~~~v~Ma~Lai~~S~~vNGVS~lH~ei~k~~~f~~f~----~l~P~kf~niTN 486 (799)
... .+.+..+.... ....++|-..++..|..|+.||.-+.+=+.+. +.... ..-+.++.-|.|
T Consensus 214 -~~~--------~~~~~~~~~~~---~~~~~n~~k~~i~~ad~v~tVS~~~a~ei~~~-~~~g~~l~~~~~~~~i~~I~N 280 (536)
T 3vue_A 214 -RSS--------FDFIDGYDTPV---EGRKINWMKAGILEADRVLTVSPYYAEELISG-IARGCELDNIMRLTGITGIVN 280 (536)
T ss_dssp -HHH--------HEEEETTTSTT---CEEEEEHHHHHHHHCSEEEESCHHHHHHHHTT-CCCCSSSCCCSCCCSCEECCC
T ss_pred -cch--------hhhhhcccccc---cccchhHHHHHHHhccEEEEcCHHHhhhhhcc-cccccccccccccCCeEEEEC
Confidence 000 00000111000 01178899999999999999999776533322 11000 112457899999
Q ss_pred ccCccccccccChhHHHHHHHhcCCcccccCcchHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCcee
Q 003742 487 GITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLF 566 (799)
Q Consensus 487 GV~~rrWl~~~np~L~~Li~~~ig~~~W~~d~~~l~~l~~~~~D~~~~~~~~~vk~~nK~~L~~~i~~~~g~~ldp~slf 566 (799)
||+...|- |.- +..... ++.... ..+.|..+|..|.+ +.|...||+..+
T Consensus 281 GiD~~~~~----p~~----------d~~~~~--------~~~~~~-----~~~~K~~~k~~l~~----~~gl~~d~~~p~ 329 (536)
T 3vue_A 281 GMDVSEWD----PSK----------DKYITA--------KYDATT-----AIEAKALNKEALQA----EAGLPVDRKIPL 329 (536)
T ss_dssp CCCTTTSC----TTT----------CSSSSC--------CCCTTT-----HHHHHHHHHHHHHH----HTTSCCCTTSCE
T ss_pred CcchhhcC----CCC----------cccccc--------ccchhh-----hhhhhHHHHHHHHH----hcCCCCCCCCcE
Confidence 99999996 432 111100 011111 23677888877654 789999999999
Q ss_pred eccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCCcccCCcc
Q 003742 567 DIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYL 646 (799)
Q Consensus 567 d~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~~~~~l 646 (799)
++++-|+.+.|...+ ++..+.++ ++ ...++++.|.. +......+ ...+... .+
T Consensus 330 i~~vgRl~~~Kg~~~-li~a~~~l---~~---------~~~~l~l~G~G---~~~~~~~~---~~~~~~~------~~-- 382 (536)
T 3vue_A 330 IAFIGRLEEQKGPDV-MAAAIPEL---MQ---------EDVQIVLLGTG---KKKFEKLL---KSMEEKY------PG-- 382 (536)
T ss_dssp EEEECCBSGGGCHHH-HHHHHHHH---TT---------SSCEEEEECCB---CHHHHHHH---HHHHHHS------TT--
T ss_pred EEEEeeccccCChHH-HHHHHHHh---Hh---------hCCeEEEEecc---CchHHHHH---HHHHhhc------CC--
Confidence 999999999999998 77776554 43 12367777754 33222222 2223222 22
Q ss_pred eEEEecCCChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccCcchhhhhhccccchhhccc
Q 003742 647 KVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGA 719 (799)
Q Consensus 647 kVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vg~en~~iFg~ 719 (799)
+|.|+..++......++.+||+...-|+ .|.+|.+-|-||.-|.+.|+|--|...|+.++. +|+|+|+.
T Consensus 383 ~v~~~~~~~~~~~~~~~~~aD~~v~PS~--~E~fgl~~lEAma~G~PvI~s~~gG~~e~V~dg--~~G~~~~~ 451 (536)
T 3vue_A 383 KVRAVVKFNAPLAHLIMAGADVLAVPSR--FEPCGLIQLQGMRYGTPCACASTGGLVDTVIEG--KTGFHMGR 451 (536)
T ss_dssp TEEEECSCCHHHHHHHHHHCSEEEECCS--CCSSCSHHHHHHHTTCCEEECSCTHHHHHCCBT--TTEEECCC
T ss_pred ceEEEEeccHHHHHHHHHhhheeecccc--cCCCCHHHHHHHHcCCCEEEcCCCCchheeeCC--CCcccccc
Confidence 7999999999999999999999998887 599999999999999999999999998887653 66665543
No 6
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=97.65 E-value=5.8e-05 Score=88.78 Aligned_cols=227 Identities=15% Similarity=0.166 Sum_probs=145.9
Q ss_pred eeeEeeeccccCcchHHHHHHhHHHHHHhhhhhhhhhcCCCccccccccCccccccccChhHHHHHHHhcCCcccccCcc
Q 003742 440 VVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLD 519 (799)
Q Consensus 440 ~v~Ma~Lai~~S~~vNGVS~lH~ei~k~~~f~~f~~l~P~kf~niTNGV~~rrWl~~~np~L~~Li~~~ig~~~W~~d~~ 519 (799)
.++|-..+++.+..++.||....+=+++ +..--|.++ |-|||....|- |.
T Consensus 250 ~~~~EKaga~~AD~ITTVS~~yA~Ei~~-----Ll~r~~d~i--IpNGID~~~f~----p~------------------- 299 (725)
T 3nb0_A 250 RYCIERAAAHSADVFTTVSQITAFEAEH-----LLKRKPDGI--LPNGLNVIKFQ----AF------------------- 299 (725)
T ss_dssp HHHHHHHHHHHSSEEEESSHHHHHHHHH-----HTSSCCSEE--CCCCBCCCCCS----ST-------------------
T ss_pred HHHHHHHHHHhCCEEEECCHHHHHHHHH-----HhcCCCCEE--EcCCccccccC----cc-------------------
Confidence 4667777888999999999876554442 223335555 89999877665 21
Q ss_pred hHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhC--CcCCCC-ceeeccccccc-cchhhhhhhhhHHHHHHHHHh
Q 003742 520 LLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTG--VTIDPN-SLFDIQVKRIH-EYKRQLLNILGAIYRYKKLKE 595 (799)
Q Consensus 520 ~l~~l~~~~~D~~~~~~~~~vk~~nK~~L~~~i~~~~g--~~ldp~-slfd~~~kR~h-eYKRq~Lnil~ii~~y~~i~~ 595 (799)
.+ +.+.|.++|++|.++++.+.+ ..++++ .+...-+-|+. +-|=-+| ++..+.++++...
T Consensus 300 -----------~~----~~~~k~~aK~klq~~l~~~~~~~l~l~~dk~liifivgRle~~nKGiDl-~ieAl~~L~~~l~ 363 (725)
T 3nb0_A 300 -----------HE----FQNLHALKKEKINDFVRGHFHGCFDFDLDNTLYFFIAGRYEYKNKGADM-FIEALARLNYRLK 363 (725)
T ss_dssp -----------TH----HHHHHHHHHHHHHHHHHHHTTTCCCSCGGGEEEEEEESSCCTTTTTHHH-HHHHHHHHHHHHH
T ss_pred -----------hh----hHHHHHHHHHHHHHHHHhhcccCCCCCCCceeEEEEEEEeccccCCHHH-HHHHHHHHHHHHh
Confidence 11 447889999999999988765 477755 55555689998 6799999 9999999887643
Q ss_pred cCcCCCCCCCCeEEE-EeccCCCCC----------------------HHHHHHHHHHH----------------------
Q 003742 596 MSPQERKKTTPRTIM-IGGKAFATY----------------------TNAKRIVKLVN---------------------- 630 (799)
Q Consensus 596 ~~~~~~~~~~P~~~I-FaGKAaP~y----------------------~~aK~iIk~I~---------------------- 630 (799)
.... +.+=+.|| +.++..--. .+||.+.....
T Consensus 364 ~~~~---~~~vvafii~p~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~ 440 (725)
T 3nb0_A 364 VSGS---KKTVVAFIVMPAKNNSFTVEALKGQAEVRALENTVHEVTTSIGKRIFDHAIRYPHNGLTTELPTDLGELLKSS 440 (725)
T ss_dssp HTTC---CCEEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCSSSCCCHHHHCCHH
T ss_pred hccC---CCcEEEEEEeCCCCCCCchhhhcchhHHHHHHHHHHHHHHHHhHHHHHHHhcccccccCCCCCCCHHHhcChH
Confidence 1211 22223443 333321100 12222222111
Q ss_pred ----------HHhh------------hhc--C------------CcccCCcceEEEecCCChhh-------hhhcccccc
Q 003742 631 ----------DVGE------------VVN--T------------DPEVNSYLKVVFVPNYNVSV-------AELLIPGSE 667 (799)
Q Consensus 631 ----------~va~------------~in--~------------Dp~~~~~lkVvFlenY~vsl-------Ae~lipa~D 667 (799)
+..+ ++| + ...-.++.||||+|.|-=+. -+.++.+||
T Consensus 441 ~~~~lkr~~~~~~~~~~~lpp~~TH~~~~~~~D~Il~~~r~l~L~N~~~drVKVIf~P~~L~~~d~lf~~d~~~~~~~ad 520 (725)
T 3nb0_A 441 DKVMLKRRILALRRPEGQLPPIVTHNMVDDANDLILNKIRQVQLFNSPSDRVKMIFHPEFLNANNPILGLDYDEFVRGCH 520 (725)
T ss_dssp HHHHHHHHHHHHCCCTTCCCCSBSEEETTGGGCHHHHHHHHHTCCCCTTCSEEEEECCSCCCTTCSSSCCCHHHHHHHCS
T ss_pred HHHHHHHHHHhhccCCCCCCCeeeeecccCCccHHHHHHHhcCCCCCcCCceeEEEeccccCCCCccchhHHHHHHhhce
Confidence 1100 010 0 11224789999999986553 356789999
Q ss_pred cccccCCCccccCCCcccceeccCceEEEeccCcchhhhhhc-c----ccchhhc
Q 003742 668 LSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEI-G----EENFFLF 717 (799)
Q Consensus 668 v~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~v-g----~en~~iF 717 (799)
+-..-|. .|..|..-|-||.-|.+.|.|--|--.|...+. + .+++++|
T Consensus 521 vfV~PS~--~EgfGl~~LEAmA~G~PvI~s~~gG~~d~V~dg~~~~~~~~tG~lV 573 (725)
T 3nb0_A 521 LGVFPSY--YEPWGYTPAECTVMGVPSITTNVSGFGSYMEDLIETNQAKDYGIYI 573 (725)
T ss_dssp EEECCCS--SBSSCHHHHHHHHTTCCEEEETTBHHHHHHHTTSCHHHHHHTTEEE
T ss_pred EEEeccc--cCCCCHHHHHHHHcCCCEEEeCCCChhhhhhccccccCCCCceEEE
Confidence 9998886 799999999999999999999777655555543 1 2466655
No 7
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=97.31 E-value=0.00085 Score=71.39 Aligned_cols=140 Identities=17% Similarity=0.088 Sum_probs=95.1
Q ss_pred HHhCCcCCCCceeeccccccc-cchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHH
Q 003742 554 RVTGVTIDPNSLFDIQVKRIH-EYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDV 632 (799)
Q Consensus 554 ~~~g~~ldp~slfd~~~kR~h-eYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~v 632 (799)
++.| ++++ ...+++-|+. .+|...+ ++..+.++ ++ .. ...+.++++.|...+. ....+-+++.+.
T Consensus 244 ~~~~--~~~~-~~i~~~G~~~~~~Kg~~~-li~a~~~l---~~-~~----~~~~~~l~i~G~g~~~--~~~~l~~~~~~~ 309 (439)
T 3fro_A 244 SKFG--MDEG-VTFMFIGRFDRGQKGVDV-LLKAIEIL---SS-KK----EFQEMRFIIIGKGDPE--LEGWARSLEEKH 309 (439)
T ss_dssp HHHT--CCSC-EEEEEECCSSCTTBCHHH-HHHHHHHH---HT-SG----GGGGEEEEEECCCCHH--HHHHHHHHHHHC
T ss_pred HHcC--CCCC-cEEEEEcccccccccHHH-HHHHHHHH---Hh-cc----cCCCeEEEEEcCCChh--HHHHHHHHHhhc
Confidence 3445 4666 8999999999 9999988 77666554 43 11 0135789999964321 112333333222
Q ss_pred hhhhcCCcccCCcceEEEecCCChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccCcchhhhhhcccc
Q 003742 633 GEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEE 712 (799)
Q Consensus 633 a~~in~Dp~~~~~lkVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vg~e 712 (799)
. + .|+|..-..-+-...++.+||+....|.. |..|.+-+-+|.-|.+.|+|-.|..-|+.++ .
T Consensus 310 ~----------~--~~~~~g~~~~~~~~~~~~~adv~v~ps~~--e~~~~~~~EAma~G~Pvi~s~~~~~~e~~~~---~ 372 (439)
T 3fro_A 310 G----------N--VKVITEMLSREFVRELYGSVDFVIIPSYF--EPFGLVALEAMCLGAIPIASAVGGLRDIITN---E 372 (439)
T ss_dssp T----------T--EEEECSCCCHHHHHHHHTTCSEEEECBSC--CSSCHHHHHHHHTTCEEEEESSTHHHHHCCT---T
T ss_pred C----------C--EEEEcCCCCHHHHHHHHHHCCEEEeCCCC--CCccHHHHHHHHCCCCeEEcCCCCcceeEEc---C
Confidence 2 2 45555547777777889999999988874 9999999999999999999988877777653 3
Q ss_pred chhhccc-cccch
Q 003742 713 NFFLFGA-VAEQV 724 (799)
Q Consensus 713 n~~iFg~-~~~ev 724 (799)
+++++.. +.+++
T Consensus 373 ~g~~~~~~d~~~l 385 (439)
T 3fro_A 373 TGILVKAGDPGEL 385 (439)
T ss_dssp TCEEECTTCHHHH
T ss_pred ceEEeCCCCHHHH
Confidence 7777763 33333
No 8
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=96.30 E-value=0.0044 Score=67.86 Aligned_cols=139 Identities=16% Similarity=0.158 Sum_probs=98.1
Q ss_pred HHHHhCCcCCCCceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHH
Q 003742 552 IWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVND 631 (799)
Q Consensus 552 i~~~~g~~ldp~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~ 631 (799)
++++.|..-+++....+++-|+..+|...+ ++..+.+ +.+ .+.++++.|...+ .....+-+++.+
T Consensus 280 ~r~~~~~~~~~~~~~i~~vGrl~~~Kg~~~-li~a~~~---l~~---------~~~~l~ivG~g~~--~~~~~l~~~~~~ 344 (485)
T 2qzs_A 280 LQIAMGLKVDDKVPLFAVVSRLTSQKGLDL-VLEALPG---LLE---------QGGQLALLGAGDP--VLQEGFLAAAAE 344 (485)
T ss_dssp HHHHHTCCCCTTSCEEEEEEEESGGGCHHH-HHHHHHH---HHH---------TTCEEEEEEEECH--HHHHHHHHHHHH
T ss_pred HHHHcCCCCCCCCeEEEEeccCccccCHHH-HHHHHHH---Hhh---------CCcEEEEEeCCch--HHHHHHHHHHHh
Confidence 345667655457889999999999999988 7666554 343 1357888886321 123333343333
Q ss_pred HhhhhcCCcccCCcceEEEecCCChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccCcchhhhhhcc-
Q 003742 632 VGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIG- 710 (799)
Q Consensus 632 va~~in~Dp~~~~~lkVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vg- 710 (799)
.. + +|+|+..|.-.....++.+||+....|. .|..|..-+-+|.-|.+.|+|-.|...|+.++..
T Consensus 345 ~~----------~--~v~~~~g~~~~~~~~~~~~adv~v~pS~--~E~~g~~~lEAma~G~PvI~s~~gg~~e~v~~~~~ 410 (485)
T 2qzs_A 345 YP----------G--QVGVQIGYHEAFSHRIMGGADVILVPSR--FEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSL 410 (485)
T ss_dssp ST----------T--TEEEEESCCHHHHHHHHHHCSEEEECCS--CCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCH
T ss_pred CC----------C--cEEEeCCCCHHHHHHHHHhCCEEEECCc--cCCCcHHHHHHHHCCCCEEECCCCCccceeccCcc
Confidence 21 2 6887777766666788999999998776 7999999999999999999998787777765421
Q ss_pred ------ccchhhccc
Q 003742 711 ------EENFFLFGA 719 (799)
Q Consensus 711 ------~en~~iFg~ 719 (799)
..++++|..
T Consensus 411 ~~~~~~~~~G~l~~~ 425 (485)
T 2qzs_A 411 ENLADGVASGFVFED 425 (485)
T ss_dssp HHHHTTCCCBEEECS
T ss_pred ccccccccceEEECC
Confidence 157777764
No 9
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=95.98 E-value=0.013 Score=64.26 Aligned_cols=215 Identities=14% Similarity=0.141 Sum_probs=130.2
Q ss_pred EeeeccccCcchHHHHHHhHHHHHHhhhh----hhhhhcCCCccccccccCccccccccChhHHHHHHHhcCCcccccCc
Q 003742 443 MANLCVVSAHTVNGVAQLHSDILKADLFA----DYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNL 518 (799)
Q Consensus 443 Ma~Lai~~S~~vNGVS~lH~ei~k~~~f~----~f~~l~P~kf~niTNGV~~rrWl~~~np~L~~Li~~~ig~~~W~~d~ 518 (799)
+...++..+..+..||+-..+.+++..+. .+....+.++.-+-|||....|-....+.+ .. .+..
T Consensus 199 ~~~~~~~~ad~vi~~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~----~~-----~~~~-- 267 (485)
T 1rzu_A 199 FLKGGLQTATALSTVSPSYAEEILTAEFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLI----HD-----NYSA-- 267 (485)
T ss_dssp HHHHHHHHCSEEEESCHHHHHHTTSHHHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTS----SS-----CCBT--
T ss_pred HHHHHHhhcCEEEecCHhHHHHHhccccCcchHHHHHhhcCCceEEcCCCcccccCCcccccc----cc-----cccc--
Confidence 33445556677777777544433211000 011234678888999999877763111110 00 0000
Q ss_pred chHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCceeeccccccccchhhhhhhhhHHHHHHHHHhcCc
Q 003742 519 DLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSP 598 (799)
Q Consensus 519 ~~l~~l~~~~~D~~~~~~~~~vk~~nK~~L~~~i~~~~g~~ldp~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~ 598 (799)
++ + .-|..+|.. ++++.|..-++ ....+++-|+.++|...+ ++..+.++ ++
T Consensus 268 ----------~~------~-~~~~~~~~~----~r~~~~~~~~~-~~~i~~vGrl~~~Kg~~~-li~a~~~l---~~--- 318 (485)
T 1rzu_A 268 ----------AN------L-KNRALNKKA----VAEHFRIDDDG-SPLFCVISRLTWQKGIDL-MAEAVDEI---VS--- 318 (485)
T ss_dssp ----------TB------C-TTHHHHHHH----HHHHHTCCCSS-SCEEEEESCBSTTTTHHH-HHTTHHHH---HH---
T ss_pred ----------cc------h-hhHHHhHHH----HHHhcCCCCCC-CeEEEEEccCccccCHHH-HHHHHHHH---Hh---
Confidence 01 1 122223332 34456654432 348889999999999988 77776554 33
Q ss_pred CCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCCcccCCcceEEEecCCChhhhhhcccccccccccCCCccc
Q 003742 599 QERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGME 678 (799)
Q Consensus 599 ~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~~~~~lkVvFlenY~vslAe~lipa~Dv~~qis~ag~E 678 (799)
.+.++++.|...+ .....+-+++.+.. + +|+|+..|.-.....++.+||+....|. .|
T Consensus 319 ------~~~~l~ivG~g~~--~~~~~l~~~~~~~~----------~--~v~~~~g~~~~~~~~~~~~adv~v~pS~--~E 376 (485)
T 1rzu_A 319 ------LGGRLVVLGAGDV--ALEGALLAAASRHH----------G--RVGVAIGYNEPLSHLMQAGCDAIIIPSR--FE 376 (485)
T ss_dssp ------TTCEEEEEECBCH--HHHHHHHHHHHHTT----------T--TEEEEESCCHHHHHHHHHHCSEEEECCS--CC
T ss_pred ------cCceEEEEeCCch--HHHHHHHHHHHhCC----------C--cEEEecCCCHHHHHHHHhcCCEEEECcc--cC
Confidence 1357888886421 12333334333321 2 6887777776666789999999998777 69
Q ss_pred cCCCcccceeccCceEEEeccCcchhhhhhc-------cccchhhccc
Q 003742 679 ASGTSNMKFSLNGCLIIGTLDGANVEIRQEI-------GEENFFLFGA 719 (799)
Q Consensus 679 ASGTsnMK~~lNGaltlgtlDGanvEi~e~v-------g~en~~iFg~ 719 (799)
..|..-+-+|.-|.+.|+|-.|...|+.++. +.+++++|..
T Consensus 377 ~~~~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~~~ 424 (485)
T 1rzu_A 377 PCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSP 424 (485)
T ss_dssp SSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESS
T ss_pred CCCHHHHHHHHCCCCEEEeCCCChhheecccccccccccCCcceEeCC
Confidence 9999999999999999999888877776542 1157777753
No 10
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=95.75 E-value=0.054 Score=61.17 Aligned_cols=134 Identities=11% Similarity=0.068 Sum_probs=81.4
Q ss_pred CceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCH-HHHHHHHHHHHHhhhhcCCcc
Q 003742 563 NSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYT-NAKRIVKLVNDVGEVVNTDPE 641 (799)
Q Consensus 563 ~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~-~aK~iIk~I~~va~~in~Dp~ 641 (799)
+..+++++-|+...|.... +|....++. .+ .|..+ ..+++|+.|....++. .-.++-+.+.+++..+|..-.
T Consensus 254 ~~~vil~VgRl~~~Kgi~~-ll~A~~~ll--~~-~p~~~---~~v~Lv~vG~p~~~~~~~~~~l~~~l~~l~~~in~~~g 326 (482)
T 1uqt_A 254 NVQNIFSVERLDYSKGLPE-RFLAYEALL--EK-YPQHH---GKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYG 326 (482)
T ss_dssp TCEEEEEECCBCGGGCHHH-HHHHHHHHH--HH-CGGGT---TTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCEEEEEEeCCcccCCHHH-HHHHHHHHH--Hh-Ccccc---CcEEEEEEECCCccchHHHHHHHHHHHHHHHHHhhhcc
Confidence 3567889999999999887 777766652 23 44421 3567877776433332 223455566666655552212
Q ss_pred cCCcceEEEecC-CChhhhhhcccccccccccCCCccccCCCcccceecc------CceEEEeccCcchhh
Q 003742 642 VNSYLKVVFVPN-YNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLN------GCLIIGTLDGANVEI 705 (799)
Q Consensus 642 ~~~~lkVvFlen-Y~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lN------GaltlgtlDGanvEi 705 (799)
..+.-.|+|+.. ..-+--..++.+|||-...|+ .|.-|..-+-||.- |.+.+|...|+.-|+
T Consensus 327 ~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~--~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~l 395 (482)
T 1uqt_A 327 QLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPL--RDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANEL 395 (482)
T ss_dssp BTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCS--SBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTC
T ss_pred cCCCceEEEeCCCCCHHHHHHHHHHccEEEECCC--cccCCchHHHHHHhCCCCCCCCEEEECCCCCHHHh
Confidence 222235887643 334444478899999998887 46555555555544 367777777776444
No 11
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=95.60 E-value=0.0086 Score=57.14 Aligned_cols=130 Identities=16% Similarity=0.084 Sum_probs=91.3
Q ss_pred CCcCCCCceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhh
Q 003742 557 GVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVV 636 (799)
Q Consensus 557 g~~ldp~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~i 636 (799)
+..++++..+.+++-|+..+|+..+ ++..+.++ .+..+++.|..... ..+.+++.+...
T Consensus 16 ~~~~~~~~~~i~~~G~~~~~Kg~~~-li~a~~~l--------------~~~~l~i~G~~~~~----~~l~~~~~~~~~-- 74 (177)
T 2f9f_A 16 KFKFKCYGDFWLSVNRIYPEKRIEL-QLEVFKKL--------------QDEKLYIVGWFSKG----DHAERYARKIMK-- 74 (177)
T ss_dssp TCCCCCCCSCEEEECCSSGGGTHHH-HHHHHHHC--------------TTSCEEEEBCCCTT----STHHHHHHHHHH--
T ss_pred ccccCCCCCEEEEEeccccccCHHH-HHHHHHhC--------------CCcEEEEEecCccH----HHHHHHHHhhhc--
Confidence 4567888889999999999999887 55443332 12467777864333 234444442221
Q ss_pred cCCcccCCcceEEEecCCChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccCcchhhhhhccccchhh
Q 003742 637 NTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFL 716 (799)
Q Consensus 637 n~Dp~~~~~lkVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vg~en~~i 716 (799)
.+.+ +|.|+...+-+-...++.+||+....|+ .|..|++-+-+|.-|.+.|+|-.|...|+.++ ..+.++
T Consensus 75 ----~l~~--~v~~~g~~~~~e~~~~~~~adi~v~ps~--~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~--~~~g~~ 144 (177)
T 2f9f_A 75 ----IAPD--NVKFLGSVSEEELIDLYSRCKGLLCTAK--DEDFGLTPIEAMASGKPVIAVNEGGFKETVIN--EKTGYL 144 (177)
T ss_dssp ----HSCT--TEEEEESCCHHHHHHHHHHCSEEEECCS--SCCSCHHHHHHHHTTCCEEEESSHHHHHHCCB--TTTEEE
T ss_pred ----ccCC--cEEEeCCCCHHHHHHHHHhCCEEEeCCC--cCCCChHHHHHHHcCCcEEEeCCCCHHHHhcC--CCccEE
Confidence 1223 6888887766667788999999998666 78999999999999999999987777666554 245555
Q ss_pred c
Q 003742 717 F 717 (799)
Q Consensus 717 F 717 (799)
+
T Consensus 145 ~ 145 (177)
T 2f9f_A 145 V 145 (177)
T ss_dssp E
T ss_pred e
Confidence 5
No 12
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=95.60 E-value=0.012 Score=56.41 Aligned_cols=132 Identities=17% Similarity=0.083 Sum_probs=88.6
Q ss_pred HHHhCCcCCCCceeeccccccc-cchhhhhhhhhHHHHHHHHH--hcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHH
Q 003742 553 WRVTGVTIDPNSLFDIQVKRIH-EYKRQLLNILGAIYRYKKLK--EMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLV 629 (799)
Q Consensus 553 ~~~~g~~ldp~slfd~~~kR~h-eYKRq~Lnil~ii~~y~~i~--~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I 629 (799)
+++.|.. ++ .+.+++-|+. .+|...+ ++..+.+ ++ + . ..+.++++.|...|. ..+.+.+++
T Consensus 28 r~~~~~~--~~-~~i~~~G~~~~~~K~~~~-li~a~~~---l~~~~-~------~~~~~l~i~G~~~~~--~~~~l~~~~ 91 (200)
T 2bfw_A 28 LSKFGMD--EG-VTFMFIGRFDRGQKGVDV-LLKAIEI---LSSKK-E------FQEMRFIIIGKGDPE--LEGWARSLE 91 (200)
T ss_dssp HHHTTCC--SC-EEEEEESCBCSSSSCHHH-HHHHHHH---HTTSG-G------GGGEEEEEECCBCHH--HHHHHHHHH
T ss_pred HHHcCCC--CC-CEEEEeeccccccCCHHH-HHHHHHH---HHhhc-c------CCCeEEEEECCCChH--HHHHHHHHH
Confidence 3455543 33 3778899999 9999887 6665544 43 2 0 135789999874431 223333333
Q ss_pred HHHhhhhcCCcccCCcceEEE-ecCCChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccCcchhhhhh
Q 003742 630 NDVGEVVNTDPEVNSYLKVVF-VPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQE 708 (799)
Q Consensus 630 ~~va~~in~Dp~~~~~lkVvF-lenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~ 708 (799)
.... +|.| +...+-+-...++..||+....|.. |..|++-+-+|..|.+.|+|--|..-|+. .
T Consensus 92 ~~~~-------------~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~--e~~~~~~~Ea~a~G~PvI~~~~~~~~e~~-~ 155 (200)
T 2bfw_A 92 EKHG-------------NVKVITEMLSREFVRELYGSVDFVIIPSYF--EPFGLVALEAMCLGAIPIASAVGGLRDII-T 155 (200)
T ss_dssp HHCT-------------TEEEECSCCCHHHHHHHHTTCSEEEECCSC--CSSCHHHHHHHHTTCEEEEESCHHHHHHC-C
T ss_pred HhcC-------------CEEEEeccCCHHHHHHHHHHCCEEEECCCC--CCccHHHHHHHHCCCCEEEeCCCChHHHc-C
Confidence 2221 5889 7766555667888999999987764 99999999999999999999777666665 2
Q ss_pred ccccchhhcc
Q 003742 709 IGEENFFLFG 718 (799)
Q Consensus 709 vg~en~~iFg 718 (799)
.++.+++.
T Consensus 156 --~~~g~~~~ 163 (200)
T 2bfw_A 156 --NETGILVK 163 (200)
T ss_dssp --TTTCEEEC
T ss_pred --CCceEEec
Confidence 35555554
No 13
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=95.29 E-value=0.03 Score=58.31 Aligned_cols=128 Identities=16% Similarity=0.124 Sum_probs=91.0
Q ss_pred CCCCceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCC
Q 003742 560 IDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTD 639 (799)
Q Consensus 560 ldp~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~D 639 (799)
++++....+++-|+..+|...+ ++..+.++.+-.. .+..+++.|...+ +.+.+++.+..
T Consensus 192 ~~~~~~~i~~~G~~~~~K~~~~-li~a~~~l~~~~~---------~~~~l~i~G~g~~-----~~~~~~~~~~~------ 250 (374)
T 2iw1_A 192 IKEQQNLLLQVGSDFGRKGVDR-SIEALASLPESLR---------HNTLLFVVGQDKP-----RKFEALAEKLG------ 250 (374)
T ss_dssp CCTTCEEEEEECSCTTTTTHHH-HHHHHHTSCHHHH---------HTEEEEEESSSCC-----HHHHHHHHHHT------
T ss_pred CCCCCeEEEEeccchhhcCHHH-HHHHHHHhHhccC---------CceEEEEEcCCCH-----HHHHHHHHHcC------
Confidence 5566778889999999999988 6655444322100 2468899998321 44555554443
Q ss_pred cccCCcceEEEecCCChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccCcchhhhhhccccchhhcc
Q 003742 640 PEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFG 718 (799)
Q Consensus 640 p~~~~~lkVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vg~en~~iFg 718 (799)
+.+ +|.|+.. .+-...++.+||+-...|. .|+.|++-+-+|.-|.+.|+|--|...|+.++. .+++++.
T Consensus 251 --~~~--~v~~~g~--~~~~~~~~~~ad~~v~ps~--~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~--~~g~~~~ 319 (374)
T 2iw1_A 251 --VRS--NVHFFSG--RNDVSELMAAADLLLHPAY--QEAAGIVLLEAITAGLPVLTTAVCGYAHYIADA--NCGTVIA 319 (374)
T ss_dssp --CGG--GEEEESC--CSCHHHHHHHCSEEEECCS--CCSSCHHHHHHHHHTCCEEEETTSTTTHHHHHH--TCEEEEC
T ss_pred --CCC--cEEECCC--cccHHHHHHhcCEEEeccc--cCCcccHHHHHHHCCCCEEEecCCCchhhhccC--CceEEeC
Confidence 122 6888874 3445677899999998776 599999999999999999999888887877653 5666665
No 14
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=95.26 E-value=0.021 Score=61.03 Aligned_cols=139 Identities=17% Similarity=0.165 Sum_probs=95.4
Q ss_pred CCCCceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHH-HHHHHHHHhhhhcC
Q 003742 560 IDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKR-IVKLVNDVGEVVNT 638 (799)
Q Consensus 560 ldp~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~-iIk~I~~va~~in~ 638 (799)
++++....+++-|+.+.|...+ ++..+..+ ++.. .+..+++.|.....+...++ +-+++....
T Consensus 227 ~~~~~~~i~~vGrl~~~Kg~~~-li~a~~~l---~~~~-------~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~----- 290 (416)
T 2x6q_A 227 VDPEKPIITQVSRFDPWKGIFD-VIEIYRKV---KEKI-------PGVQLLLVGVMAHDDPEGWIYFEKTLRKIG----- 290 (416)
T ss_dssp CCTTSCEEEEECCCCTTSCHHH-HHHHHHHH---HHHC-------TTCEEEEEECCCTTCHHHHHHHHHHHHHHT-----
T ss_pred CCCCCcEEEEEeccccccCHHH-HHHHHHHH---HHhC-------CCeEEEEEecCcccchhHHHHHHHHHHHhC-----
Confidence 5567788999999999999987 77665554 3311 24688888876544333233 333333322
Q ss_pred CcccCCcceEEEec---CCChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccCcchhhhhhccccchh
Q 003742 639 DPEVNSYLKVVFVP---NYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFF 715 (799)
Q Consensus 639 Dp~~~~~lkVvFle---nY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vg~en~~ 715 (799)
..+ +|.|+. +++-.-...++.+||+-...|. .|..|+.-+-+|.-|.+.|+|--|...|+.++ .++++
T Consensus 291 ---~~~--~V~~~G~~~~~~~~~~~~~~~~ad~~v~ps~--~E~~~~~~lEAma~G~PvI~~~~~g~~e~i~~--~~~g~ 361 (416)
T 2x6q_A 291 ---EDY--DVKVLTNLIGVHAREVNAFQRASDVILQMSI--REGFGLTVTEAMWKGKPVIGRAVGGIKFQIVD--GETGF 361 (416)
T ss_dssp ---TCT--TEEEEEGGGTCCHHHHHHHHHHCSEEEECCS--SCSSCHHHHHHHHTTCCEEEESCHHHHHHCCB--TTTEE
T ss_pred ---CCC--cEEEecccCCCCHHHHHHHHHhCCEEEECCC--cCCCccHHHHHHHcCCCEEEccCCCChhheec--CCCeE
Confidence 123 588865 4444455678899999988776 59999999999999999999977777776654 25777
Q ss_pred hccccccch
Q 003742 716 LFGAVAEQV 724 (799)
Q Consensus 716 iFg~~~~ev 724 (799)
++. +.+++
T Consensus 362 l~~-d~~~l 369 (416)
T 2x6q_A 362 LVR-DANEA 369 (416)
T ss_dssp EES-SHHHH
T ss_pred EEC-CHHHH
Confidence 776 44444
No 15
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=94.37 E-value=0.059 Score=57.73 Aligned_cols=136 Identities=16% Similarity=0.185 Sum_probs=93.1
Q ss_pred CCCCceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCC
Q 003742 560 IDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTD 639 (799)
Q Consensus 560 ldp~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~D 639 (799)
++++....+++-|+...|...+ ++..+.++ .+..|. ....+++.|...+.....+.+.+++.+..
T Consensus 239 ~~~~~~~i~~~G~~~~~Kg~~~-li~a~~~l---~~~~p~-----~~~~l~i~G~~~~~g~~~~~l~~~~~~~~------ 303 (438)
T 3c48_A 239 IPLHTKVVAFVGRLQPFKGPQV-LIKAVAAL---FDRDPD-----RNLRVIICGGPSGPNATPDTYRHMAEELG------ 303 (438)
T ss_dssp CCSSSEEEEEESCBSGGGCHHH-HHHHHHHH---HHHCTT-----CSEEEEEECCBC------CHHHHHHHHTT------
T ss_pred CCCCCcEEEEEeeecccCCHHH-HHHHHHHH---HhhCCC-----cceEEEEEeCCCCCCcHHHHHHHHHHHcC------
Confidence 5567788999999999999888 76665554 331221 24788888874332122344444444332
Q ss_pred cccCCcceEEEecCCChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccCcchhhhhhccccchhhcc
Q 003742 640 PEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFG 718 (799)
Q Consensus 640 p~~~~~lkVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vg~en~~iFg 718 (799)
+.+ +|.|+....-+-...++.+||+-...|. .|..|+.-+-+|.-|.+.|+|--|...|+.++ ..+++++.
T Consensus 304 --l~~--~v~~~g~~~~~~~~~~~~~adv~v~ps~--~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~--~~~g~~~~ 374 (438)
T 3c48_A 304 --VEK--RIRFLDPRPPSELVAVYRAADIVAVPSF--NESFGLVAMEAQASGTPVIAARVGGLPIAVAE--GETGLLVD 374 (438)
T ss_dssp --CTT--TEEEECCCCHHHHHHHHHHCSEEEECCS--CCSSCHHHHHHHHTTCCEEEESCTTHHHHSCB--TTTEEEES
T ss_pred --CCC--cEEEcCCCChHHHHHHHHhCCEEEECcc--ccCCchHHHHHHHcCCCEEecCCCChhHHhhC--CCcEEECC
Confidence 223 6889887655556678899999887764 58999999999999999999988887777654 24666665
No 16
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=94.31 E-value=0.046 Score=57.16 Aligned_cols=135 Identities=13% Similarity=0.127 Sum_probs=95.6
Q ss_pred CCCCceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCC
Q 003742 560 IDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTD 639 (799)
Q Consensus 560 ldp~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~D 639 (799)
++++....+++-|+.++|+..+ ++..+.++ ++.. ....+++.|.. | ....+-+++..+.
T Consensus 194 ~~~~~~~i~~~G~~~~~Kg~~~-li~a~~~l---~~~~-------~~~~l~i~G~g-~---~~~~l~~~~~~~~------ 252 (394)
T 3okp_A 194 FTDTTPVIACNSRLVPRKGQDS-LIKAMPQV---IAAR-------PDAQLLIVGSG-R---YESTLRRLATDVS------ 252 (394)
T ss_dssp CCTTCCEEEEESCSCGGGCHHH-HHHHHHHH---HHHS-------TTCEEEEECCC-T---THHHHHHHTGGGG------
T ss_pred CCcCceEEEEEeccccccCHHH-HHHHHHHH---HhhC-------CCeEEEEEcCc-h---HHHHHHHHHhccc------
Confidence 5667788999999999999988 77666554 3311 23578888853 1 1233333332221
Q ss_pred cccCCcceEEEecCCChhhhhhcccccccccccCCCc-----cccCCCcccceeccCceEEEeccCcchhhhhhccccch
Q 003742 640 PEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAG-----MEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENF 714 (799)
Q Consensus 640 p~~~~~lkVvFlenY~vslAe~lipa~Dv~~qis~ag-----~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vg~en~ 714 (799)
+ +|.|+....-+-...++.+||+....|..+ .|+.|+.-+-+|.-|.+.|+|--|..-|+.++ .++
T Consensus 253 ----~--~v~~~g~~~~~~~~~~~~~ad~~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~---~~g 323 (394)
T 3okp_A 253 ----Q--NVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGGAPETVTP---ATG 323 (394)
T ss_dssp ----G--GEEEEESCCHHHHHHHHHHCSEEEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSSTTGGGGCCT---TTE
T ss_pred ----C--eEEEcCCCCHHHHHHHHHhCCEEEecCccccccccccccCcHHHHHHHcCCCEEEeCCCChHHHHhc---CCc
Confidence 2 699998865566667889999999988873 49999999999999999999988888777654 266
Q ss_pred hhccc-cccch
Q 003742 715 FLFGA-VAEQV 724 (799)
Q Consensus 715 ~iFg~-~~~ev 724 (799)
+++.. +.+++
T Consensus 324 ~~~~~~d~~~l 334 (394)
T 3okp_A 324 LVVEGSDVDKL 334 (394)
T ss_dssp EECCTTCHHHH
T ss_pred eEeCCCCHHHH
Confidence 77653 44444
No 17
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=93.48 E-value=0.047 Score=65.70 Aligned_cols=144 Identities=15% Similarity=0.107 Sum_probs=102.3
Q ss_pred HhCCcCCCCceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCC---CCHHHHHHHHHHHH
Q 003742 555 VTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFA---TYTNAKRIVKLVND 631 (799)
Q Consensus 555 ~~g~~ldp~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP---~y~~aK~iIk~I~~ 631 (799)
..|...+++...++++-|+..+|...+ ++..+.++.+... ...+++.|...+ .+...+...+.+.+
T Consensus 563 ~lg~l~~~~~~vIl~vGRl~~~KGid~-LIeA~~~L~~~~~----------~v~LvIvG~g~~~~~~~~e~~~~~~~L~~ 631 (816)
T 3s28_A 563 HLCVLKDKKKPILFTMARLDRVKNLSG-LVEWYGKNTRLRE----------LANLVVVGGDRRKESKDNEEKAEMKKMYD 631 (816)
T ss_dssp EESCBSCTTSCEEEEECCCCTTTTHHH-HHHHHHHCHHHHH----------HCEEEEECCCTTSCCCCHHHHHHHHHHHH
T ss_pred HhcccCCCCCeEEEEEccCcccCCHHH-HHHHHHHHHhhCC----------CeEEEEEeCCCcccccchhhHHHHHHHHH
Confidence 345555888999999999999999998 7777666543221 246777777653 34444555555555
Q ss_pred HhhhhcCCcccCCcceEEEec---CC--ChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccCcchhhh
Q 003742 632 VGEVVNTDPEVNSYLKVVFVP---NY--NVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIR 706 (799)
Q Consensus 632 va~~in~Dp~~~~~lkVvFle---nY--~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~ 706 (799)
+++.. .+.+ +|.|+. ++ .-.+.+.+-.+|||-...|. .|+.|..-+-||.-|.+.|+|-.|...|+.
T Consensus 632 li~~l----gL~~--~V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~--~EgfglvllEAMA~G~PVIasd~GG~~EiV 703 (816)
T 3s28_A 632 LIEEY----KLNG--QFRWISSQMDRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCKGGPAEII 703 (816)
T ss_dssp HHHHT----TCBB--BEEEECCCCCHHHHHHHHHHHHHTTCEEEECCS--CBSSCHHHHHHHHTTCCEEEESSBTHHHHC
T ss_pred HHHHc----CCCC--cEEEccCccccCCHHHHHHHHHhcCeEEEECCC--ccCccHHHHHHHHcCCCEEEeCCCChHHHH
Confidence 55432 3445 788886 21 13355666668999998776 599999999999999999999988888887
Q ss_pred hhccccchhhccc
Q 003742 707 QEIGEENFFLFGA 719 (799)
Q Consensus 707 e~vg~en~~iFg~ 719 (799)
++ .++++++..
T Consensus 704 ~d--g~~Gllv~p 714 (816)
T 3s28_A 704 VH--GKSGFHIDP 714 (816)
T ss_dssp CB--TTTBEEECT
T ss_pred cc--CCcEEEeCC
Confidence 54 257777764
No 18
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=93.12 E-value=0.1 Score=55.57 Aligned_cols=129 Identities=12% Similarity=0.106 Sum_probs=87.4
Q ss_pred CceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCC--CHHHHHHHHHHHHHhhhhcCCc
Q 003742 563 NSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFAT--YTNAKRIVKLVNDVGEVVNTDP 640 (799)
Q Consensus 563 ~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~--y~~aK~iIk~I~~va~~in~Dp 640 (799)
+....+++-|+.++|...+ ++..+.++.+ + .| +..+++.|...+. +..-+.+-+++.+.. +. .
T Consensus 183 ~~~~il~vGr~~~~Kg~~~-li~a~~~l~~--~-~~-------~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~--l~--~ 247 (413)
T 3oy2_A 183 DDVLFLNMNRNTARKRLDI-YVLAAARFIS--K-YP-------DAKVRFLCNSHHESKFDLHSIALRELVASG--VD--N 247 (413)
T ss_dssp TSEEEECCSCSSGGGTHHH-HHHHHHHHHH--H-CT-------TCCEEEEEECCTTCSCCHHHHHHHHHHHHT--CS--C
T ss_pred CceEEEEcCCCchhcCcHH-HHHHHHHHHH--h-CC-------CcEEEEEeCCcccchhhHHHHHHHHHHHcC--cc--c
Confidence 7889999999999999998 7777666422 2 22 3467777766543 333355555554443 11 1
Q ss_pred ccCCcceEEEecCC-ChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccCcchhhhhh
Q 003742 641 EVNSYLKVVFVPNY-NVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQE 708 (799)
Q Consensus 641 ~~~~~lkVvFlenY-~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~ 708 (799)
.|+-.-+||++..| +-+-...++.+||+-...|. .|..|..-+-+|.-|.+.|+|--|..-|+.++
T Consensus 248 ~v~~l~~vv~~~g~~~~~~~~~~~~~adv~v~pS~--~E~~~~~~lEAma~G~PvI~s~~~g~~e~v~~ 314 (413)
T 3oy2_A 248 VFTHLNKIMINRTVLTDERVDMMYNACDVIVNCSS--GEGFGLCSAEGAVLGKPLIISAVGGADDYFSG 314 (413)
T ss_dssp HHHHHTTEEEECSCCCHHHHHHHHHHCSEEEECCS--CCSSCHHHHHHHTTTCCEEEECCHHHHHHSCT
T ss_pred ccccccceeeccCcCCHHHHHHHHHhCCEEEeCCC--cCCCCcHHHHHHHcCCCEEEcCCCChHHHHcc
Confidence 11000025555554 43445567899999998776 79999999999999999999988887777654
No 19
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=92.73 E-value=0.14 Score=53.13 Aligned_cols=130 Identities=18% Similarity=0.149 Sum_probs=89.6
Q ss_pred CceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCCccc
Q 003742 563 NSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEV 642 (799)
Q Consensus 563 ~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~~ 642 (799)
+..+.+++-|+...|...+ ++..+.+. + ..+++.|.. |. ...+-+++..+.
T Consensus 161 ~~~~i~~vG~~~~~Kg~~~-li~a~~~~----~-----------~~l~i~G~g-~~---~~~l~~~~~~~~--------- 211 (342)
T 2iuy_A 161 KEDFLLFMGRVSPHKGALE-AAAFAHAC----G-----------RRLVLAGPA-WE---PEYFDEITRRYG--------- 211 (342)
T ss_dssp CCSCEEEESCCCGGGTHHH-HHHHHHHH----T-----------CCEEEESCC-CC---HHHHHHHHHHHT---------
T ss_pred CCCEEEEEeccccccCHHH-HHHHHHhc----C-----------cEEEEEeCc-cc---HHHHHHHHHHhC---------
Confidence 3447888999999999987 66554432 2 357778865 22 223333333322
Q ss_pred CCcceEEEecCCChhhhhhcccccccccccCCC--------ccccCCCcccceeccCceEEEeccCcchhhhhhccccch
Q 003742 643 NSYLKVVFVPNYNVSVAELLIPGSELSQHISTA--------GMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENF 714 (799)
Q Consensus 643 ~~~lkVvFlenY~vslAe~lipa~Dv~~qis~a--------g~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vg~en~ 714 (799)
+ +|.|+..-.=.-...++.+||+....|.. -.|..|++-+-+|.-|.+.|+|--|..-|+.++.|.+++
T Consensus 212 -~--~v~~~g~~~~~~l~~~~~~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~~~~e~~~~~~~~~g 288 (342)
T 2iuy_A 212 -S--TVEPIGEVGGERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGCLAEIVPSVGEVVG 288 (342)
T ss_dssp -T--TEEECCCCCHHHHHHHHHHCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTTTHHHHGGGGEEECC
T ss_pred -C--CEEEeccCCHHHHHHHHHhCCEEEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCCChHHHhcccCCCce
Confidence 2 68887765443346778999999887761 169999999999999999999998888888876434677
Q ss_pred hhccccccch
Q 003742 715 FLFGAVAEQV 724 (799)
Q Consensus 715 ~iFg~~~~ev 724 (799)
+++..+.+++
T Consensus 289 ~~~~~d~~~l 298 (342)
T 2iuy_A 289 YGTDFAPDEA 298 (342)
T ss_dssp SSSCCCHHHH
T ss_pred EEcCCCHHHH
Confidence 8886544444
No 20
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=92.73 E-value=0.11 Score=57.07 Aligned_cols=135 Identities=16% Similarity=0.100 Sum_probs=94.3
Q ss_pred CCCCceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccC-CC--CCH----H----HHHHHHH
Q 003742 560 IDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKA-FA--TYT----N----AKRIVKL 628 (799)
Q Consensus 560 ldp~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKA-aP--~y~----~----aK~iIk~ 628 (799)
++++....+++-|+...|...+ ++..+.++.+-. | ....++++|.. .| .|. . -.++.++
T Consensus 258 ~~~~~~~i~~vGrl~~~Kg~~~-li~a~~~l~~~~---~------~~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~ 327 (499)
T 2r60_A 258 ERMELPAIIASSRLDQKKNHYG-LVEAYVQNKELQ---D------KANLVLTLRGIENPFEDYSRAGQEEKEILGKIIEL 327 (499)
T ss_dssp GGTTSCEEEECSCCCGGGCHHH-HHHHHHTCHHHH---H------HCEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHHH
T ss_pred cCCCCcEEEEeecCccccCHHH-HHHHHHHHHHhC---C------CceEEEEECCCCCcccccccccccchHHHHHHHHH
Confidence 4566778999999999999988 776665543211 1 13567777762 22 121 1 3445555
Q ss_pred HHHHhhhhcCCcccCCcceEEEecCCChhhhhhccccc----ccccccCCCccccCCCcccceeccCceEEEeccCcchh
Q 003742 629 VNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGS----ELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVE 704 (799)
Q Consensus 629 I~~va~~in~Dp~~~~~lkVvFlenY~vslAe~lipa~----Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvE 704 (799)
+.+.. +.+ +|.|+....-+-...++.+| |+-...|. .|..|..-+-+|.-|.+.|+|--|...|
T Consensus 328 ~~~~~--------l~~--~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~--~Eg~~~~~lEAma~G~PvI~s~~~g~~e 395 (499)
T 2r60_A 328 IDNND--------CRG--KVSMFPLNSQQELAGCYAYLASKGSVFALTSF--YEPFGLAPVEAMASGLPAVVTRNGGPAE 395 (499)
T ss_dssp HHHTT--------CBT--TEEEEECCSHHHHHHHHHHHHHTTCEEEECCS--CBCCCSHHHHHHHTTCCEEEESSBHHHH
T ss_pred HHhcC--------CCc--eEEECCCCCHHHHHHHHHhcCcCCCEEEECcc--cCCCCcHHHHHHHcCCCEEEecCCCHHH
Confidence 44332 234 69998876556667788999 99998776 5999999999999999999998887777
Q ss_pred hhhhccccchhhcc
Q 003742 705 IRQEIGEENFFLFG 718 (799)
Q Consensus 705 i~e~vg~en~~iFg 718 (799)
+.++. ++++++.
T Consensus 396 ~v~~~--~~g~l~~ 407 (499)
T 2r60_A 396 ILDGG--KYGVLVD 407 (499)
T ss_dssp HTGGG--TSSEEEC
T ss_pred HhcCC--ceEEEeC
Confidence 76652 5677775
No 21
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=92.24 E-value=0.079 Score=56.12 Aligned_cols=128 Identities=20% Similarity=0.236 Sum_probs=86.7
Q ss_pred CCCCceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCC
Q 003742 560 IDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTD 639 (799)
Q Consensus 560 ldp~slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~D 639 (799)
++++....+++-|+...|...+ ++..+.+ +++ . .|..+++.|... ...++.+++.+..
T Consensus 207 ~~~~~~~i~~~G~~~~~Kg~~~-li~a~~~---l~~-~-------~~~~l~i~G~g~----~~~~l~~~~~~~~------ 264 (394)
T 2jjm_A 207 ISESEKILIHISNFRKVKRVQD-VVQAFAK---IVT-E-------VDAKLLLVGDGP----EFCTILQLVKNLH------ 264 (394)
T ss_dssp CC---CEEEEECCCCGGGTHHH-HHHHHHH---HHH-S-------SCCEEEEECCCT----THHHHHHHHHTTT------
T ss_pred CCCCCeEEEEeeccccccCHHH-HHHHHHH---HHh-h-------CCCEEEEECCch----HHHHHHHHHHHcC------
Confidence 4456778889999999999887 6655444 454 1 356888888532 1234444443322
Q ss_pred cccCCcceEEEecCCChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccCcchhhhhhccccchhhccc
Q 003742 640 PEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGA 719 (799)
Q Consensus 640 p~~~~~lkVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vg~en~~iFg~ 719 (799)
+.+ +|.|+.. .+-...++.+||+....|. .|+.|++-+-+|..|.+.|+|--|...|+.++. ++++++..
T Consensus 265 --l~~--~v~~~g~--~~~~~~~~~~adv~v~ps~--~e~~~~~~~EAma~G~PvI~~~~~~~~e~v~~~--~~g~~~~~ 334 (394)
T 2jjm_A 265 --IED--RVLFLGK--QDNVAELLAMSDLMLLLSE--KESFGLVLLEAMACGVPCIGTRVGGIPEVIQHG--DTGYLCEV 334 (394)
T ss_dssp --CGG--GBCCCBS--CSCTHHHHHTCSEEEECCS--CCSCCHHHHHHHHTTCCEEEECCTTSTTTCCBT--TTEEEECT
T ss_pred --CCC--eEEEeCc--hhhHHHHHHhCCEEEeccc--cCCCchHHHHHHhcCCCEEEecCCChHHHhhcC--CceEEeCC
Confidence 223 5777763 3344567789999998776 699999999999999999999888887776542 56677753
No 22
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=89.29 E-value=0.47 Score=43.77 Aligned_cols=112 Identities=19% Similarity=0.171 Sum_probs=78.1
Q ss_pred eeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCCcccCC
Q 003742 565 LFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNS 644 (799)
Q Consensus 565 lfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~~~~ 644 (799)
+..+++-|+...|...+ ++..+.++ +. + .+..+++.|... . ...+.+++....-
T Consensus 3 ~~i~~~G~~~~~Kg~~~-li~a~~~l---~~-~-------~~~~l~i~G~g~-~---~~~~~~~~~~~~~---------- 56 (166)
T 3qhp_A 3 FKIAMVGRYSNEKNQSV-LIKAVALS---KY-K-------QDIVLLLKGKGP-D---EKKIKLLAQKLGV---------- 56 (166)
T ss_dssp EEEEEESCCSTTTTHHH-HHHHHHTC---TT-G-------GGEEEEEECCST-T---HHHHHHHHHHHTC----------
T ss_pred eEEEEEeccchhcCHHH-HHHHHHHh---cc-C-------CCeEEEEEeCCc-c---HHHHHHHHHHcCC----------
Confidence 56788899999999988 76665543 32 1 356899998632 1 3445555544431
Q ss_pred cceEEEecCCChhhhhhcccccccccccCCCccccCCCcccceeccCc-eEEEecc-Ccchhhhh
Q 003742 645 YLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGC-LIIGTLD-GANVEIRQ 707 (799)
Q Consensus 645 ~lkVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGa-ltlgtlD-GanvEi~e 707 (799)
+|.| ...+-+-...++.+||+....|. .|..|.+-+-+|..|. +.|+|-+ |..-|+.+
T Consensus 57 --~v~~-g~~~~~~~~~~~~~adv~v~ps~--~e~~~~~~~Eama~G~vPvi~~~~~~~~~~~~~ 116 (166)
T 3qhp_A 57 --KAEF-GFVNSNELLEILKTCTLYVHAAN--VESEAIACLEAISVGIVPVIANSPLSATRQFAL 116 (166)
T ss_dssp --EEEC-CCCCHHHHHHHHTTCSEEEECCC--SCCCCHHHHHHHHTTCCEEEECCTTCGGGGGCS
T ss_pred --eEEE-eecCHHHHHHHHHhCCEEEECCc--ccCccHHHHHHHhcCCCcEEeeCCCCchhhhcc
Confidence 4666 55455566778899999998776 6999999999999996 9999765 44445544
No 23
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=88.90 E-value=0.26 Score=51.80 Aligned_cols=125 Identities=13% Similarity=0.104 Sum_probs=86.9
Q ss_pred Cceeecccccc-ccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCCcc
Q 003742 563 NSLFDIQVKRI-HEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPE 641 (799)
Q Consensus 563 ~slfd~~~kR~-heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~ 641 (799)
+....+++-|+ ..+|...+ ++..+.+ +++ . .....+++.|... . ..+.+++.++
T Consensus 207 ~~~~i~~~G~~~~~~Kg~~~-li~a~~~---l~~-~------~~~~~l~i~G~~~---~--~~l~~~~~~~--------- 261 (406)
T 2gek_A 207 EGRTVLFLGRYDEPRKGMAV-LLAALPK---LVA-R------FPDVEILIVGRGD---E--DELREQAGDL--------- 261 (406)
T ss_dssp SSCEEEEESCTTSGGGCHHH-HHHHHHH---HHT-T------STTCEEEEESCSC---H--HHHHHHTGGG---------
T ss_pred CCeEEEEEeeeCccccCHHH-HHHHHHH---HHH-H------CCCeEEEEEcCCc---H--HHHHHHHHhc---------
Confidence 45678889999 99999887 6655444 443 1 1246888888742 2 4444444332
Q ss_pred cCCcceEEEecCCChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccCcchhhhhhccccchhhcc
Q 003742 642 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFG 718 (799)
Q Consensus 642 ~~~~lkVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vg~en~~iFg 718 (799)
.+ +|.|+...+=.-...++.+||+-...|. ..|..|++-+-+|.-|.+.|+|--|..-|+.++ .++++++.
T Consensus 262 -~~--~v~~~g~~~~~~~~~~~~~adv~v~ps~-~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~--~~~g~~~~ 332 (406)
T 2gek_A 262 -AG--HLRFLGQVDDATKASAMRSADVYCAPHL-GGESFGIVLVEAMAAGTAVVASDLDAFRRVLAD--GDAGRLVP 332 (406)
T ss_dssp -GG--GEEECCSCCHHHHHHHHHHSSEEEECCC-SCCSSCHHHHHHHHHTCEEEECCCHHHHHHHTT--TTSSEECC
T ss_pred -cC--cEEEEecCCHHHHHHHHHHCCEEEecCC-CCCCCchHHHHHHHcCCCEEEecCCcHHHHhcC--CCceEEeC
Confidence 12 6888876544444678899999987653 368899999999999999999977777666654 25677774
No 24
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=63.69 E-value=11 Score=41.86 Aligned_cols=103 Identities=12% Similarity=0.118 Sum_probs=68.4
Q ss_pred eeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCCcccC-C
Q 003742 566 FDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVN-S 644 (799)
Q Consensus 566 fd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~~~-~ 644 (799)
+.+++-|+.. |.... ++..+.+ |+...| ...+++.|. .|. .-..+.+++.+.. +. +
T Consensus 378 ~v~~~g~~~~-K~~~~-li~a~~~---l~~~~~-------~~~l~i~G~--~g~-~~~~l~~~~~~~~--------l~~~ 434 (568)
T 2vsy_A 378 VVLCCFNNSY-KLNPQ-SMARMLA---VLREVP-------DSVLWLLSG--PGE-ADARLRAFAHAQG--------VDAQ 434 (568)
T ss_dssp CEEEECCCGG-GCCHH-HHHHHHH---HHHHCT-------TCEEEEECC--STT-HHHHHHHHHHHTT--------CCGG
T ss_pred EEEEeCCccc-cCCHH-HHHHHHH---HHHhCC-------CcEEEEecC--CHH-HHHHHHHHHHHcC--------CChh
Confidence 3447888888 98887 6665554 433122 357778885 222 2334444444332 22 3
Q ss_pred cceEEEecCCChhhhhhcccccccccccCCCccccCCCcccceeccCceEEE
Q 003742 645 YLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIG 696 (799)
Q Consensus 645 ~lkVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlg 696 (799)
+|.|+.--+-.-...++.+|||....|.. ..|+.-+=+|.-|.+.|+
T Consensus 435 --~v~~~g~~~~~~~~~~~~~adv~v~ps~~---~~g~~~lEAma~G~Pvv~ 481 (568)
T 2vsy_A 435 --RLVFMPKLPHPQYLARYRHADLFLDTHPY---NAHTTASDALWTGCPVLT 481 (568)
T ss_dssp --GEEEECCCCHHHHHHHGGGCSEEECCSSS---CCSHHHHHHHHTTCCEEB
T ss_pred --HEEeeCCCCHHHHHHHHhcCCEEeeCCCC---CCcHHHHHHHhCCCCEEe
Confidence 69998764433445678999999987765 789999999999999999
No 25
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=52.71 E-value=13 Score=38.42 Aligned_cols=127 Identities=15% Similarity=0.079 Sum_probs=72.8
Q ss_pred CCceeeccccccccc-hhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCCc
Q 003742 562 PNSLFDIQVKRIHEY-KRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDP 640 (799)
Q Consensus 562 p~slfd~~~kR~heY-KRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp 640 (799)
++..+.+++-|+.+. |.... ++..+. ++.+..| ..++|+++ +|.. .+.+.+.+... .
T Consensus 204 ~~~~vl~~~gr~~~~~K~~~~-li~a~~---~l~~~~~-------~~~~i~~~--g~~~----~~~~~~~~~~~---~-- 261 (375)
T 3beo_A 204 NNRLVLMTAHRRENLGEPMRN-MFRAIK---RLVDKHE-------DVQVVYPV--HMNP----VVRETANDILG---D-- 261 (375)
T ss_dssp TSEEEEEECCCGGGTTHHHHH-HHHHHH---HHHHHCT-------TEEEEEEC--CSCH----HHHHHHHHHHT---T--
T ss_pred CCCeEEEEecccccchhHHHH-HHHHHH---HHHhhCC-------CeEEEEeC--CCCH----HHHHHHHHHhh---c--
Confidence 345566788888775 87655 555444 3443011 24577753 4432 22233333221 1
Q ss_pred ccCCcceEEEecCCChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEecc-Ccchhhhhhccccchhhccc
Q 003742 641 EVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLD-GANVEIRQEIGEENFFLFGA 719 (799)
Q Consensus 641 ~~~~~lkVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlD-GanvEi~e~vg~en~~iFg~ 719 (799)
.+ +|.|+....-.-...++.+||+-..-| |+.-+=+|.-|.+.|+|.+ |...|+.+. .+++++..
T Consensus 262 --~~--~v~~~g~~~~~~~~~~~~~ad~~v~~s-------g~~~lEA~a~G~Pvi~~~~~~~~~e~v~~---g~g~~v~~ 327 (375)
T 3beo_A 262 --YG--RIHLIEPLDVIDFHNVAARSYLMLTDS-------GGVQEEAPSLGVPVLVLRDTTERPEGIEA---GTLKLAGT 327 (375)
T ss_dssp --CT--TEEEECCCCHHHHHHHHHTCSEEEECC-------HHHHHHHHHHTCCEEECSSCCSCHHHHHT---TSEEECCS
T ss_pred --cC--CEEEeCCCCHHHHHHHHHhCcEEEECC-------CChHHHHHhcCCCEEEecCCCCCceeecC---CceEEcCC
Confidence 12 588876544334556789999987543 4446679999999999976 766666543 26666643
Q ss_pred cccch
Q 003742 720 VAEQV 724 (799)
Q Consensus 720 ~~~ev 724 (799)
+.+++
T Consensus 328 d~~~l 332 (375)
T 3beo_A 328 DEETI 332 (375)
T ss_dssp CHHHH
T ss_pred CHHHH
Confidence 44333
No 26
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=51.23 E-value=35 Score=38.78 Aligned_cols=128 Identities=13% Similarity=0.055 Sum_probs=79.1
Q ss_pred ceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCH-HHHHHHHHHHHHhhhhcCCccc
Q 003742 564 SLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYT-NAKRIVKLVNDVGEVVNTDPEV 642 (799)
Q Consensus 564 slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~-~aK~iIk~I~~va~~in~Dp~~ 642 (799)
.-++.++-|+...|-... +|... ++ +++ .|+. +.+++|..|....++. .-.++-+.|.+++..||..-
T Consensus 281 ~~lIl~VgRLd~~KGi~~-lL~Af-~l--l~~-~P~~----~~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~-- 349 (496)
T 3t5t_A 281 HRLVVHSGRTDPIKNAER-AVRAF-VL--AAR-GGGL----EKTRMLVRMNPNRLYVPANADYVHRVETAVAEANAEL-- 349 (496)
T ss_dssp SEEEEEEEESSGGGCHHH-HHHHH-HH--HHH-TSSC----TTEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHH--
T ss_pred ceEEEEcccCccccCHHH-HHHHH-HH--HHh-Cccc----ceEEEEEEECCCCCCchHHHHHHHHHHHHHHHhcccc--
Confidence 557888999999998877 66665 44 334 4542 2466776665444443 33456666777776665211
Q ss_pred CCcceEEEecCCChhhhhhcccccccccccCCCccccCCCccccee----ccCceEEEeccCcchhh
Q 003742 643 NSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFS----LNGCLIIGTLDGANVEI 705 (799)
Q Consensus 643 ~~~lkVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~----lNGaltlgtlDGanvEi 705 (799)
+..+|+|+..-+.+---.++.+|||-..+|++ |-=|.--+-+| ..|.+.+|..-|+--|+
T Consensus 350 -g~~~V~f~g~v~~~el~aly~~ADv~vv~Slr--EGfgLv~~EamA~~~~~g~lVlSe~aGa~~~l 413 (496)
T 3t5t_A 350 -GSDTVRIDNDNDVNHTIACFRRADLLIFNSTV--DGQNLSTFEAPLVNERDADVILSETCGAAEVL 413 (496)
T ss_dssp -CTTSEEEEECCCHHHHHHHHHHCSEEEECCSS--BSCCSHHHHHHHHCSSCCEEEEETTBTTHHHH
T ss_pred -CCcCEEEeCCCCHHHHHHHHHhccEEEECccc--ccCChhHHHHHHhCCCCCCEEEeCCCCCHHHh
Confidence 11168888643444445788999998888875 32333222222 24899999988887444
No 27
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=48.68 E-value=44 Score=34.56 Aligned_cols=124 Identities=13% Similarity=0.040 Sum_probs=70.4
Q ss_pred ceeeccccccccc-hhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEe-ccCCCCCHHHHHHHHHHHHHhhhhcCCcc
Q 003742 564 SLFDIQVKRIHEY-KRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIG-GKAFATYTNAKRIVKLVNDVGEVVNTDPE 641 (799)
Q Consensus 564 slfd~~~kR~heY-KRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFa-GKAaP~y~~aK~iIk~I~~va~~in~Dp~ 641 (799)
....+++-|+.+. |.... ++..+ .++++.. ....+++. | |+... .+.+.+... .
T Consensus 206 ~~vl~~~gr~~~~~kg~~~-li~a~---~~l~~~~-------~~~~l~i~~g---~~~~~----~~~l~~~~~---~--- 261 (384)
T 1vgv_A 206 KMILVTGHRRESFGRGFEE-ICHAL---ADIATTH-------QDIQIVYPVH---LNPNV----REPVNRILG---H--- 261 (384)
T ss_dssp EEEEEECCCBSSCCHHHHH-HHHHH---HHHHHHC-------TTEEEEEECC---BCHHH----HHHHHHHHT---T---
T ss_pred CEEEEEeCCccccchHHHH-HHHHH---HHHHhhC-------CCeEEEEEcC---CCHHH----HHHHHHHhh---c---
Confidence 3556688888876 75443 44433 3344301 23567774 4 22112 222222221 1
Q ss_pred cCCcceEEEecCCChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEecc-Ccchhhhhhccccchhhcccc
Q 003742 642 VNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLD-GANVEIRQEIGEENFFLFGAV 720 (799)
Q Consensus 642 ~~~~lkVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlD-GanvEi~e~vg~en~~iFg~~ 720 (799)
.+ +|.|+..-.-.-...++.+||+-..-| |+.-+=+|.-|.+.|+|-. |...|+.+. .+++++..+
T Consensus 262 -~~--~v~~~g~~~~~~~~~~~~~ad~~v~~S-------g~~~lEA~a~G~PvI~~~~~~~~~e~v~~---g~g~lv~~d 328 (384)
T 1vgv_A 262 -VK--NVILIDPQEYLPFVWLMNHAWLILTDS-------GGIQEEAPSLGKPVLVMRDTTERPEAVTA---GTVRLVGTD 328 (384)
T ss_dssp -CT--TEEEECCCCHHHHHHHHHHCSEEEESS-------STGGGTGGGGTCCEEEESSCCSCHHHHHH---TSEEEECSS
T ss_pred -CC--CEEEeCCCCHHHHHHHHHhCcEEEECC-------cchHHHHHHcCCCEEEccCCCCcchhhhC---CceEEeCCC
Confidence 12 688864322234556789999976544 4456789999999999976 766666543 266677554
Q ss_pred ccch
Q 003742 721 AEQV 724 (799)
Q Consensus 721 ~~ev 724 (799)
.+++
T Consensus 329 ~~~l 332 (384)
T 1vgv_A 329 KQRI 332 (384)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4444
No 28
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=34.10 E-value=58 Score=34.90 Aligned_cols=93 Identities=11% Similarity=0.021 Sum_probs=66.2
Q ss_pred eeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCCcccCC
Q 003742 565 LFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNS 644 (799)
Q Consensus 565 lfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~~~~ 644 (799)
...+++-|+.+.|.. +..+.+.. ....+++.|.- . + .+..+.+
T Consensus 223 ~~i~~vGrl~~~Kg~----------~~~l~~~~-------~~~~l~ivG~g---~-------------~----~~~~l~~ 265 (406)
T 2hy7_A 223 IHAVAVGSMLFDPEF----------FVVASKAF-------PQVTFHVIGSG---M-------------G----RHPGYGD 265 (406)
T ss_dssp EEEEEECCTTBCHHH----------HHHHHHHC-------TTEEEEEESCS---S-------------C----CCTTCCT
T ss_pred cEEEEEeccccccCH----------HHHHHHhC-------CCeEEEEEeCc---h-------------H----HhcCCCC
Confidence 678899999999987 22233311 24688888843 2 1 2334445
Q ss_pred cceEEEecCCChhhhhhcccccccccccCCCccccCCCccccee-------ccCceEEEec
Q 003742 645 YLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFS-------LNGCLIIGTL 698 (799)
Q Consensus 645 ~lkVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~-------lNGaltlgtl 698 (799)
+|.|+.--.-+-...++.+||+-...|. .|..|..-+-+| .-|.+.|+|-
T Consensus 266 --~V~f~G~~~~~~l~~~~~~adv~v~ps~--~E~~~~~~lEAm~Kl~eYla~G~PVIas~ 322 (406)
T 2hy7_A 266 --NVIVYGEMKHAQTIGYIKHARFGIAPYA--SEQVPVYLADSSMKLLQYDFFGLPAVCPN 322 (406)
T ss_dssp --TEEEECCCCHHHHHHHHHTCSEEECCBS--CSCCCTTHHHHCHHHHHHHHHTCCEEEEG
T ss_pred --CEEEcCCCCHHHHHHHHHhcCEEEECCC--cccCchHHHHHHHHHHHHhhCCCcEEEeh
Confidence 7999876544445567899999988776 588888888899 9999999993
No 29
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=33.18 E-value=66 Score=34.83 Aligned_cols=121 Identities=10% Similarity=0.039 Sum_probs=75.0
Q ss_pred ceeecccccc-ccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCCccc
Q 003742 564 SLFDIQVKRI-HEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEV 642 (799)
Q Consensus 564 slfd~~~kR~-heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~~ 642 (799)
..+.+++-|+ .+.|...+ ++..+.++ ++..|.. .+..++++|...+.. .-.+
T Consensus 241 ~~~il~~gr~~~~~Kg~~~-li~A~~~l---~~~~~~~----~~~~l~ivG~~~~~~-------------------~l~~ 293 (413)
T 2x0d_A 241 EKIILVYGRPSVKRNAFTL-IVEALKIF---VQKYDRS----NEWKIISVGEKHKDI-------------------ALGK 293 (413)
T ss_dssp CSEEEEEECTTCGGGCHHH-HHHHHHHH---HHHCTTG----GGCEEEEEESCCCCE-------------------EEET
T ss_pred CCEEEEEecCchhccCHHH-HHHHHHHH---HHhCCCC----CceEEEEEcCCchhh-------------------hcCC
Confidence 3345566675 67777666 66655544 3311210 125788888643320 0112
Q ss_pred CCcceEEEecCCChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccCcchhhhhhccccchhhcc
Q 003742 643 NSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFG 718 (799)
Q Consensus 643 ~~~lkVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vg~en~~iFg 718 (799)
.+ +|.|+..-.-+--..++.+|||....|. .|.-|..-+=+|.-|.+.|++-.| ..|+.++ .+|++++.
T Consensus 294 ~~--~v~f~G~~~~~~l~~~~~~adv~v~pS~--~E~~g~~~lEAmA~G~PVV~~~~g-~~e~v~~--~~~G~lv~ 362 (413)
T 2x0d_A 294 GI--HLNSLGKLTLEDYADLLKRSSIGISLMI--SPHPSYPPLEMAHFGLRVITNKYE-NKDLSNW--HSNIVSLE 362 (413)
T ss_dssp TE--EEEEEESCCHHHHHHHHHHCCEEECCCS--SSSCCSHHHHHHHTTCEEEEECBT-TBCGGGT--BTTEEEES
T ss_pred cC--cEEEcCCCCHHHHHHHHHhCCEEEEecC--CCCCCcHHHHHHhCCCcEEEeCCC-cchhhhc--CCCEEEeC
Confidence 22 7889876555555678899999888776 366677778889999999997444 4577654 25666654
No 30
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=30.57 E-value=1.7e+02 Score=33.33 Aligned_cols=136 Identities=13% Similarity=0.031 Sum_probs=80.8
Q ss_pred hhccccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCceEEEEEhh
Q 003742 14 KLAKIPAAANPLANEPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSME 93 (799)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~k~~~~~~l~~~~g~~~~~at~~~~y~Ala~~vRD~l~~~w~~t~~~~~~~~~k~vyYlSmE 93 (799)
++-.+|.-.....+..+. ..++.+.|...+|++..+ . + ..-|.++.+...+++... ..|+|..+. +
T Consensus 307 ~~~GiP~i~~~~PiG~~~-T~~~l~~la~~~g~~~~~-----~---i-~~er~r~~~~l~d~~~~l---~GKrvaI~g-d 372 (523)
T 3u7q_B 307 GTWKHEVPKLNIPMGLDW-TDEFLMKVSEISGQPIPA-----S---L-TKERGRLVDMMTDSHTWL---HGKRFALWG-D 372 (523)
T ss_dssp HTSCCCCCCCCCSCHHHH-HHHHHHHHHHHHCCCCCH-----H---H-HHHHHHHHHHHHHHHHHH---TTCEEEEEC-S
T ss_pred HHhCCCeeecCCcCCHHH-HHHHHHHHHHHHCCChhH-----H---H-HHHHHHHHHHHHHHHHhc---CCCEEEEEC-C
Confidence 344688776444554433 344677777777876521 1 1 122334444444444443 458888774 2
Q ss_pred hccccchhHHhhccCc--------------HHHHHHHHHHc----------CCChHHHHh----hccccCCCCCCcccch
Q 003742 94 FLQGRTLTNAIGSLDI--------------QNAYADALNNL----------GHVLEEIAE----QEKDAALGNGGLGRLA 145 (799)
Q Consensus 94 fl~Gr~L~nnL~NLgi--------------~~~~~eaL~~l----------g~~l~~i~~----~E~D~~LgnGGLGrLA 145 (799)
=..-..|..-|..||+ .+.+++.|+++ |-|+.++.+ ..+|+-+|++---.+|
T Consensus 373 ~~~~~~la~fL~elGm~vv~v~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~D~~~l~~~i~~~~pDLlig~s~~k~~a 452 (523)
T 3u7q_B 373 PDFVMGLVKFLLELGCEPVHILCHNGNKRWKKAVDAILAASPYGKNATVYIGKDLWHLRSLVFTDKPDFMIGNSYGKFIQ 452 (523)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEETTCCHHHHHHHHHHHHTSGGGTTCEEEESCCHHHHHHHHHHTCCSEEEECTTHHHHH
T ss_pred chHHHHHHHHHHHcCCEEEEEEeCCCCHHHHHHHHHHHhhccCCCCcEEEECCCHHHHHHHHHhcCCCEEEECccHHHHH
Confidence 2222234444555664 24466777752 447777765 4799999987555677
Q ss_pred hhhHhhhhccCCCeEEEe
Q 003742 146 SCFLDSMATLNLPAWGYG 163 (799)
Q Consensus 146 acfldS~A~LglP~~G~G 163 (799)
-..+-++..||+|++-+|
T Consensus 453 ~~~~~~~~~~giP~irig 470 (523)
T 3u7q_B 453 RDTLHKGKEFEVPLIRIG 470 (523)
T ss_dssp HHHHHHCGGGCCCEEECS
T ss_pred HHhhcccccCCCceEEec
Confidence 666688899999998776
No 31
>3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine phosphatase, hydrolase; 1.26A {Homo sapiens}
Probab=28.13 E-value=71 Score=29.07 Aligned_cols=37 Identities=22% Similarity=0.278 Sum_probs=29.7
Q ss_pred CceeEEeCCCc---ccccHHHHHHHHHhhcCCCHHHHHHHhccc
Q 003742 332 SKVAVQLNDTH---PTLAIPELMRLLMDEEGLGWDEAWDITTRT 372 (799)
Q Consensus 332 ~~~~ihlNdtH---palai~ElmR~L~de~gl~~~~A~~iv~~~ 372 (799)
.++.||+.-|. +++++.-||+ ..|+++++|++.+++.
T Consensus 82 ~~VlVHC~~G~sRS~~~v~ayLm~----~~~~~~~~A~~~v~~~ 121 (144)
T 3s4e_A 82 GVVLVHSNAGVSRAAAIVIGFLMN----SEQTSFTSAFSLVKNA 121 (144)
T ss_dssp CCEEEECSSSSSHHHHHHHHHHHH----HHCCCHHHHHHHHHHH
T ss_pred CeEEEEcCCCCchHHHHHHHHHHH----HcCCCHHHHHHHHHHH
Confidence 46899999998 6677666665 4599999999998874
No 32
>3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase, nucleus; 2.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1m3g_A
Probab=25.09 E-value=98 Score=27.96 Aligned_cols=37 Identities=19% Similarity=0.322 Sum_probs=28.9
Q ss_pred CceeEEeCCCc---ccccHHHHHHHHHhhcCCCHHHHHHHhccc
Q 003742 332 SKVAVQLNDTH---PTLAIPELMRLLMDEEGLGWDEAWDITTRT 372 (799)
Q Consensus 332 ~~~~ihlNdtH---palai~ElmR~L~de~gl~~~~A~~iv~~~ 372 (799)
.++.||+.-|. +++++.-|| ...|+++++|++.+++.
T Consensus 82 ~~VlVHC~~G~~RS~~~~~aylm----~~~~~~~~~A~~~v~~~ 121 (144)
T 3ezz_A 82 GRVLVHSQAGISRSATICLAYLM----MKKRVRLEEAFEFVKQR 121 (144)
T ss_dssp CCEEEEESSSSSHHHHHHHHHHH----HHHTCCHHHHHHHHHTT
T ss_pred CeEEEECCCCCChhHHHHHHHHH----HHcCCCHHHHHHHHHHH
Confidence 46899999998 556655555 45699999999999874
No 33
>3emu_A Leucine rich repeat and phosphatase domain containing protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.30A {Entamoeba histolytica}
Probab=24.23 E-value=80 Score=29.64 Aligned_cols=37 Identities=19% Similarity=0.205 Sum_probs=30.1
Q ss_pred CceeEEeCCCc---ccccHHHHHHHHHhhcCCCHHHHHHHhccc
Q 003742 332 SKVAVQLNDTH---PTLAIPELMRLLMDEEGLGWDEAWDITTRT 372 (799)
Q Consensus 332 ~~~~ihlNdtH---palai~ElmR~L~de~gl~~~~A~~iv~~~ 372 (799)
.++.||+.-|. +++++.-||+ .+|+++++|++.+++.
T Consensus 88 ~~VlVHC~~G~sRS~~vv~ayLm~----~~~~s~~~A~~~v~~~ 127 (161)
T 3emu_A 88 EGVLIISGTGVNKAPAIVIAFLMY----YQRLSFINAFNKVQGL 127 (161)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHHH----HTTCCHHHHHHHHHHH
T ss_pred CeEEEEcCCCCcHHHHHHHHHHHH----HhCCCHHHHHHHHHHH
Confidence 46899999998 6777776665 4699999999999874
Done!