BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003743
(799 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FNP1|PEX1_ARATH Peroxisome biogenesis protein 1 OS=Arabidopsis thaliana GN=PEX1 PE=2
SV=2
Length = 1130
Score = 989 bits (2558), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/799 (64%), Positives = 615/799 (76%), Gaps = 13/799 (1%)
Query: 2 VSLSPCHFKMLEKDKAFGIGLE-LDNKNHKTKKMLEKTSSGIYMDDGDLSAEDDIIAALS 60
+SLSPC FK+ E +K G + L N N K + Y+D D S D ++ ALS
Sbjct: 344 LSLSPCVFKISENEKVLDKGTDRLGNNNSVRKSSHPPSGLSTYVDVVDWSVHDKVVTALS 403
Query: 61 SEPSSKEDEEAVYQFENKKGLECLLHTWLLAQLTAVASNIGSEFNTLVLSNETLLHFEVK 120
SE E +NKKGLE L W LAQL A+AS G + ++L++ ET HFEV+
Sbjct: 404 SEGLHDEGNHD----KNKKGLEYLTRLWSLAQLDAMASVTGVDVSSLIVGRETFFHFEVR 459
Query: 121 GYKSGTYGKVPASCNGALENKTKARELRTEIFCVLTFSEESLHGGKNNAYELTLEARGQQ 180
G +S S N E+ K + EI V+T S+ESL G K Y+L+L+ R ++
Sbjct: 460 GLESYKSIDGQPSVNDRWESGKKDKHTPLEILYVMTVSDESLLGDKFAGYDLSLD-RSEK 518
Query: 181 NNNTEAVRQLFGKLNSGDSVSFYTVKERGSTQGFDSNVSSLSWMGTTASDVINRIKVLLS 240
++N + + K+N G+ + + KE +G ++SSL+WMG SDVI R+ VLLS
Sbjct: 519 SDNVVHIEPVLEKMNLGEPIYLKSAKETHCNKGVSPDISSLTWMGPIVSDVIKRMTVLLS 578
Query: 241 PDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLE 300
P +G+WFS + +P PGHILI+GPPGSGKT LA+A AK E KDL+AH++ V CS L+LE
Sbjct: 579 PAAGMWFSKFKIPSPGHILIYGPPGSGKTILARAAAKYFEEQKDLLAHVILVSCSTLALE 638
Query: 301 KGPIIRQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMD 360
K I LS+ I+E L+HAPS++I D+LDSIISSSSD EG+Q S V LTKFL D++D
Sbjct: 639 KVQHIHHVLSSVIAEGLEHAPSVIILDDLDSIISSSSDTEGTQASVGVTMLTKFLTDVID 698
Query: 361 EYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQ 420
+YGE R SSCGIGP+AFVAS QSLE+IPQ+L+SSGRFDFHVQL APA SER AIL+HEIQ
Sbjct: 699 DYGEYRNSSCGIGPLAFVASVQSLEQIPQTLSSSGRFDFHVQLAAPATSERGAILKHEIQ 758
Query: 421 RRSLECSDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVRDD 480
+R L+CS++ILL++A+KC+GYDAYDLEILVDR VHAA+GR+L +S+ K+ LV++D
Sbjct: 759 KRLLDCSEDILLNLAAKCEGYDAYDLEILVDRAVHAAIGRHLPLESNISKY---NLVKED 815
Query: 481 FSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPL 540
F++AMH+F+PVAMRDITK+++EGGR GW+DVGG+TDI+NAIKEMIELPSKFP IFA++PL
Sbjct: 816 FTRAMHDFVPVAMRDITKSASEGGRLGWEDVGGVTDIKNAIKEMIELPSKFPKIFAKSPL 875
Query: 541 RLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATA 600
RLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKA A
Sbjct: 876 RLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAAA 935
Query: 601 AAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDA 660
AAPC+LFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLD
Sbjct: 936 AAPCILFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDP 995
Query: 661 ALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGADLQALL 720
ALLRPGRLDRLL CDFPSP ERL+IL V+SRKL +ADD+DLE IA MTEGFSGADLQALL
Sbjct: 996 ALLRPGRLDRLLLCDFPSPPERLEILTVLSRKLLMADDIDLEPIALMTEGFSGADLQALL 1055
Query: 721 SDAQLSAVHEILNNIDSNEPGKMPVITDALLKSIASKARPSVSEAEKLRLYSIYGQFLDS 780
SDAQL+AVHE LN D E G P+ITD LLKSIASK +PSVSE EK +LY IY QFLDS
Sbjct: 1056 SDAQLAAVHEYLNREDKPETGTTPIITDPLLKSIASKTKPSVSETEKQKLYDIYSQFLDS 1115
Query: 781 KKSVAAQSRDAKGKRATLA 799
+KS SR+AKGKRATLA
Sbjct: 1116 RKS----SREAKGKRATLA 1130
>sp|O43933|PEX1_HUMAN Peroxisome biogenesis factor 1 OS=Homo sapiens GN=PEX1 PE=1 SV=1
Length = 1283
Score = 389 bits (1000), Expect = e-107, Method: Compositional matrix adjust.
Identities = 222/487 (45%), Positives = 309/487 (63%), Gaps = 26/487 (5%)
Query: 256 GHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISE 315
G +L+ G GSGK++LAKA+ K E L AH+ V C L ++ I++ L SE
Sbjct: 593 GALLLTGGKGSGKSTLAKAICK--EAFDKLDAHVERVDCKALRGKRLENIQKTLEVAFSE 650
Query: 316 ALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIA--LTKFLVDIMDEYGEKRKSSCGIG 373
A+ PS+V+ D+LD I + PE +V + L L D++ E+ +G
Sbjct: 651 AVWMQPSVVLLDDLDLIAGLPAVPEHEHSPDAVQSQRLAHALNDMIKEF-------ISMG 703
Query: 374 P-IAFVASAQSLEKI-PQSLTSSGRFDFH-VQLPAPAASERKAILEHEIQRRSLEC---- 426
+A +A++QS + + P +++ G F VQ P E++ + + + L+C
Sbjct: 704 SLVALIATSQSQQSLHPLLVSAQGVHIFQCVQHIQPPNQEQRCEILCNVIKNKLDCDINK 763
Query: 427 -SDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVRDDFSQAM 485
+D L VA + G+ A D +LVDR +H+ + R S S+ EK + TL DF +A+
Sbjct: 764 FTDLDLQHVAKETGGFVARDFTVLVDRAIHSRLSR--QSISTREKLVLTTL---DFQKAL 818
Query: 486 HEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSN 545
FLP ++R + GWD +GGL +++ + + I+LP+K+P +FA P+R R+
Sbjct: 819 RGFLPASLRSVNLHKPRD--LGWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTG 876
Query: 546 VLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCL 605
+LLYGPPG GKT + G A + FISVKGPELL+KYIGASEQAVRDIF +A AA PC+
Sbjct: 877 ILLYGPPGTGKTLLAGVIARESRMNFISVKGPELLSKYIGASEQAVRDIFIRAQAAKPCI 936
Query: 606 LFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRP 665
LFFDEF+SIAP+RGHDNTGVTDRVVNQ LT+LDGVE L GV+V AATSRPDL+D ALLRP
Sbjct: 937 LFFDEFESIAPRRGHDNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRP 996
Query: 666 GRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQL 725
GRLD+ ++C P RL+IL V+S LPLADDVDL+ +A +T+ F+GADL+ALL +AQL
Sbjct: 997 GRLDKCVYCPPPDQVSRLEILNVLSDSLPLADDVDLQHVASVTDSFTGADLKALLYNAQL 1056
Query: 726 SAVHEIL 732
A+H +L
Sbjct: 1057 EALHGML 1063
>sp|Q5BL07|PEX1_MOUSE Peroxisome biogenesis factor 1 OS=Mus musculus GN=Pex1 PE=1 SV=2
Length = 1284
Score = 369 bits (948), Expect = e-101, Method: Compositional matrix adjust.
Identities = 215/486 (44%), Positives = 300/486 (61%), Gaps = 30/486 (6%)
Query: 256 GHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISE 315
G +LI G GSGK++ AKA+ K E L A + V C L ++ I++AL SE
Sbjct: 594 GALLITGGKGSGKSTFAKAICK--EAQDTLDARVETVDCKALRGKRLESIQKALEVAFSE 651
Query: 316 ALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIA--LTKFLVDIMDEYGEKRKSSCGIG 373
A PS+++ D+LD I S PE +V + L L D++ E+ S G
Sbjct: 652 AAWRQPSVILLDDLDLIAGLPSVPEQEHSPEAVQSQRLAHALNDMIKEF-----VSTG-S 705
Query: 374 PIAFVASAQSLEKIPQSLTSS-GRFDF----HVQLPAPAASERKAILEHEIQRRSLECSD 428
+A +A++Q + + SL S+ G F H+Q P P E++ + H + + L C
Sbjct: 706 LVALIATSQLQQSLHPSLVSAQGIHTFQCVQHLQPPNP---EQRCEILHSVVKNKLGCDI 762
Query: 429 EILLDVASKC-----DGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVRDDFSQ 483
D+ +C + + A D +LVDR +H+++ R S TL DF +
Sbjct: 763 SNFPDLDLQCIAKDTEAFVARDFTVLVDRAIHSSLSRQHSSSRE-----DLTLTTSDFQK 817
Query: 484 AMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLR 543
A+ FLP ++R++ GWD +GGL +++ + + I+LP+K+P +FA P+R R
Sbjct: 818 ALRGFLPASLRNVNLHKPRD--LGWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQR 875
Query: 544 SNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAP 603
+ +LLYGPPG GKT + G A + FIS+KGPELL+KYIGASEQAVRD+F +A AA P
Sbjct: 876 TGILLYGPPGTGKTLLAGVVARESGMNFISIKGPELLSKYIGASEQAVRDVFIRAQAAKP 935
Query: 604 CLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALL 663
C+LFFDEF+SIAP+RGHDNTGVTDRVVNQ LT+LDGVE L GV+V AATSRPDL+D ALL
Sbjct: 936 CILFFDEFESIAPRRGHDNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALL 995
Query: 664 RPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDA 723
RPGRLD+ ++C P RL+IL V+S+ L LADDVDL+ +A +T+ F+GADL+ALL +A
Sbjct: 996 RPGRLDKCVYCPPPDQVSRLEILTVLSKSLALADDVDLQHVASVTDSFTGADLKALLYNA 1055
Query: 724 QLSAVH 729
QL A+
Sbjct: 1056 QLEALQ 1061
>sp|Q54GX5|PEX1_DICDI Peroxisome biogenesis factor 1 OS=Dictyostelium discoideum GN=pex1
PE=3 SV=1
Length = 1227
Score = 366 bits (939), Expect = e-100, Method: Compositional matrix adjust.
Identities = 207/508 (40%), Positives = 305/508 (60%), Gaps = 34/508 (6%)
Query: 251 HLPLPG--HILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQA 308
L PG ++I G GSGK+ LA ++ A I+ + C++L K IR+
Sbjct: 596 QLNTPGVNGMIIAGSHGSGKSLLATSLGGYYSTDSRSNAFIIKLDCNQLKELKVENIRKQ 655
Query: 309 LSNFISEALDHAPS---------------IVIFDNLDSIISSSSDPEGSQPSTSVIALTK 353
+ ++ + + I+I ++LD I+ + +D Q S I +
Sbjct: 656 FNKLFYKSCKESGNTLSATTSTNTTPPPIIIILESLDLILGTPND----QDPGSKIRCEQ 711
Query: 354 FLVDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKA 413
+ I + + S I IA V S+QSL QS+ F ++L AP ER
Sbjct: 712 LVSHIKSLCFKYQNRSSPIVMIATVISSQSL---CQSIQIPELFGLTIELQAPTREERVE 768
Query: 414 ILEHEIQRRSLECSDEI---LLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEK 470
ILE ++ + + D+ L+ ++ +GY D+E +VDR++H + + + ++++
Sbjct: 769 ILERYLKYQGKQLKDQQSLNLMKFSASMEGYLGCDVEQIVDRSIHLSSIKEIENNNNNND 828
Query: 471 HIKPTLVRDDFS---QAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIEL 527
+ + FS +A + P+ ++ I S+E W D+GGL ++ +KE IE
Sbjct: 829 DNDDDNIIE-FSIIEKAKEGYTPITLKGIKLHSSE---IKWQDIGGLDSVRAMLKETIEW 884
Query: 528 PSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGAS 587
P+K+P +F +PLRLRS +LLYGP GCGKT + A A C L FISVKGPELLNKYIG+S
Sbjct: 885 PTKYPKLFQSSPLRLRSGILLYGPTGCGKTLLASAIAGECGLNFISVKGPELLNKYIGSS 944
Query: 588 EQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVF 647
EQ VRD+FS+A++A PC+LFFDEFDSIAP+RGHDN+GVTDRVVNQFLT+LDGVE LTGV+
Sbjct: 945 EQGVRDVFSRASSAKPCVLFFDEFDSIAPRRGHDNSGVTDRVVNQFLTQLDGVEGLTGVY 1004
Query: 648 VFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHM 707
V AATSRPDL+D ALLRPGRLD+ L+C+ P ERLDIL + K+ L+ + LE ++
Sbjct: 1005 VLAATSRPDLIDPALLRPGRLDKSLYCNIPEFNERLDILTCLKSKMNLSPSISLEQLSTN 1064
Query: 708 TEGFSGADLQALLSDAQLSAVHEILNNI 735
T+ ++GADL+AL+ +AQL ++HE +N++
Sbjct: 1065 TQYYTGADLRALMYNAQLKSIHEWMNHL 1092
Score = 36.6 bits (83), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 67/177 (37%), Gaps = 33/177 (18%)
Query: 247 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII- 305
F + L L IL++GP G GKT LA A+A C KGP +
Sbjct: 892 FQSSPLRLRSGILLYGPTGCGKTLLASAIAGE--------------CGLNFISVKGPELL 937
Query: 306 -------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDI 358
Q + + S A P ++ FD DSI P ++ V +
Sbjct: 938 NKYIGSSEQGVRDVFSRASSAKPCVLFFDEFDSIA-----PRRGHDNSGVTD------RV 986
Query: 359 MDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAIL 415
++++ + G+ + +A+ + I +L GR D + P +ER IL
Sbjct: 987 VNQFLTQLDGVEGLTGVYVLAATSRPDLIDPALLRPGRLDKSLYCNIPEFNERLDIL 1043
>sp|P46463|PEX1_PICPA Peroxisome biosynthesis protein PAS1 OS=Komagataella pastoris GN=PEX1
PE=3 SV=1
Length = 1157
Score = 360 bits (925), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 205/527 (38%), Positives = 300/527 (56%), Gaps = 61/527 (11%)
Query: 256 GHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISE 315
G L+ G GSGK+ + VA+ + + V + C ++ E +R + SE
Sbjct: 517 GGSLLFGTSGSGKSLVISQVAQIVTNKGHFVK---LLNCDKIMSESYNNLRGIFEDIFSE 573
Query: 316 ALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGIGPI 375
APS++I ++LDS+I + + S S L+++ + + R I
Sbjct: 574 VSWKAPSLLILEDLDSLIPAEQEHSDSSQSRQ---LSEYFISKLSAQTINRD-------I 623
Query: 376 AFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSD-EILLDV 434
+AS++S E + + ++ + QL AP RK IL+ + ++ CS+ E+L ++
Sbjct: 624 TILASSKSKESLNSLIFTTHLIEHDFQLRAPDKEARKQILQSYLDTLNVFCSEGELLNNI 683
Query: 435 ASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIK--------------------- 473
A + +GY DL++L DR H + R + +DS E I+
Sbjct: 684 AVETEGYLPKDLKVLCDRAYHDLISRDILADSDSELDIEESSTPILNGSVGDIANKQSEI 743
Query: 474 -----------------------PTLVRDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDD 510
T+ +D+F A+ ++P ++R + ++ WDD
Sbjct: 744 ENGISGLELTNNSSSTIAVDKHGATIQKDNFDSALSGYIPQSLRGVKLQKSD---VRWDD 800
Query: 511 VGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLR 570
+GGL D ++ + E +E P+K+ IF+ PLRLRS +LLYG PGCGKT + A AA C L
Sbjct: 801 IGGLRDAKSILLETLEWPTKYAPIFSSCPLRLRSGILLYGYPGCGKTLLASAVAAQCGLN 860
Query: 571 FISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVV 630
FIS+KGPE+LNKYIG SEQ+VR++F +A AA PC+LFFDEFDSIAPKRGHD+TGVTDRVV
Sbjct: 861 FISIKGPEILNKYIGPSEQSVRELFERAQAAKPCILFFDEFDSIAPKRGHDSTGVTDRVV 920
Query: 631 NQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVIS 690
NQ LT++DG E L GV+V AATSRPDL+D+ALLRPGRLD+ + CD P +RLDIL+ ++
Sbjct: 921 NQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMPDFDDRLDILQSVT 980
Query: 691 RKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEILNNIDS 737
R + ++ V+L ++A GFSGADLQAL +A L AVHE L +S
Sbjct: 981 RNMNVSKSVNLSSVAGECSGFSGADLQALAYNAYLKAVHEKLTKDES 1027
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 89/231 (38%), Gaps = 36/231 (15%)
Query: 247 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII- 305
FS+ L L IL++G PG GKT LA AVA C KGP I
Sbjct: 825 FSSCPLRLRSGILLYGYPGCGKTLLASAVAAQ--------------CGLNFISIKGPEIL 870
Query: 306 -------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDI 358
Q++ A P I+ FD DSI P+ ST V +
Sbjct: 871 NKYIGPSEQSVRELFERAQAAKPCILFFDEFDSIA-----PKRGHDSTGVTD------RV 919
Query: 359 MDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHE 418
+++ + + G+ + +A+ + I +L GR D V P +R IL+
Sbjct: 920 VNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMPDFDDRLDILQSV 979
Query: 419 IQRRSLECSDEI-LLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSF 468
R++ S + L VA +C G+ DL+ L AV L D S
Sbjct: 980 T--RNMNVSKSVNLSSVAGECSGFSGADLQALAYNAYLKAVHEKLTKDESM 1028
>sp|P24004|PEX1_YEAST Peroxisomal ATPase PEX1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PEX1 PE=1 SV=2
Length = 1043
Score = 327 bits (837), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 204/557 (36%), Positives = 302/557 (54%), Gaps = 57/557 (10%)
Query: 258 ILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRL----SLEKGPIIRQALSNFI 313
I++ G G GKT L K + +E KD + + C L +L+K ++ + +
Sbjct: 457 IILDGKQGIGKTRLLKELINEVE--KDHHIFVKYADCETLHETSNLDK---TQKLIMEWC 511
Query: 314 SEALDHAPSIVIFDNLDSII----SSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSS 369
S + PS+++ DN++++ ++ DP + + L F ++ + + K
Sbjct: 512 SFCYWYGPSLIVLDNVEALFGKPQANDGDPSNNGQWDNASKLLNFFINQVTKIFNKDNKR 571
Query: 370 CGIGPIAFVASAQSLEKIPQSLTSSGRFDFHV-----QLPAPAASERKAILEHEIQRRSL 424
I + S + +I L FD H L AP R +LE+ + +
Sbjct: 572 -----IRVLFSGKQKTQINPLL-----FDKHFVSETWSLRAPDKHARAKLLEYFFSKNQI 621
Query: 425 E--CSDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVRDDFS 482
D D++ + +G+ DLEI ++ + D E+ + R+ FS
Sbjct: 622 MKLNRDLQFSDLSLETEGFSPLDLEIFTEKIFY---------DLQLERDCDNVVTRELFS 672
Query: 483 QAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRL 542
+++ F P A+R + T + W D+G L + ++ + E +E P+K+ IF PLRL
Sbjct: 673 KSLSAFTPSALRGVKLTKETNIK--WGDIGALANAKDVLLETLEWPTKYEPIFVNCPLRL 730
Query: 543 RSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAA 602
RS +LLYG PGCGKT + A A C L FISVKGPE+LNK+IGASEQ +R++F +A +
Sbjct: 731 RSGILLYGYPGCGKTLLASAVAQQCGLNFISVKGPEILNKFIGASEQNIRELFERAQSVK 790
Query: 603 PCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAAL 662
PC+LFFDEFDSIAPKRGHD+TGVTDRVVNQ LT++DG E L GV++ AATSRPDL+D+AL
Sbjct: 791 PCILFFDEFDSIAPKRGHDSTGVTDRVVNQLLTQMDGAEGLDGVYILAATSRPDLIDSAL 850
Query: 663 LRPGRLDRLLFCDFPSPRERLDILKVI---------SRKLPLADDVDLEAIAHMTEGFSG 713
LRPGRLD+ + C+ P+ ERLDIL+ I +K L + DL+ IA T GFSG
Sbjct: 851 LRPGRLDKSVICNIPTESERLDILQAIVNSKDKDTGQKKFALEKNADLKLIAEKTAGFSG 910
Query: 714 ADLQALLSDAQLSAVHEILNNIDSNEPGKMPVITDALLKSIASKARPSVSEAEKLRLYSI 773
ADLQ L +A L +VH L+ D +E +P + SI R E +LRL ++
Sbjct: 911 ADLQGLCYNAYLKSVHRWLSAADQSEV--VPGNDNIEYFSINEHGR---REENRLRLKTL 965
Query: 774 YGQFL--DSKKSVAAQS 788
Q + ++K S +A S
Sbjct: 966 LQQDVVHETKTSTSAAS 982
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 90/233 (38%), Gaps = 43/233 (18%)
Query: 247 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII- 305
F L L IL++G PG GKT LA AVA+ C KGP I
Sbjct: 723 FVNCPLRLRSGILLYGYPGCGKTLLASAVAQQ--------------CGLNFISVKGPEIL 768
Query: 306 -------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDI 358
Q + A P I+ FD DSI P+ ST V +
Sbjct: 769 NKFIGASEQNIRELFERAQSVKPCILFFDEFDSIA-----PKRGHDSTGVTD------RV 817
Query: 359 MDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHE 418
+++ + + G+ + +A+ + I +L GR D V P SER IL+
Sbjct: 818 VNQLLTQMDGAEGLDGVYILAATSRPDLIDSALLRPGRLDKSVICNIPTESERLDILQAI 877
Query: 419 IQRR---------SLECSDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYL 462
+ + +LE + ++ L +A K G+ DL+ L +V R+L
Sbjct: 878 VNSKDKDTGQKKFALEKNADLKL-IAEKTAGFSGADLQGLCYNAYLKSVHRWL 929
>sp|O05209|VAT_THEAC VCP-like ATPase OS=Thermoplasma acidophilum (strain ATCC 25905 /
DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165) GN=vat
PE=1 SV=1
Length = 745
Score = 317 bits (811), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 205/561 (36%), Positives = 300/561 (53%), Gaps = 58/561 (10%)
Query: 247 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII- 305
F + P ++++GPPG+GKT +A+AVA + F+ + GP I
Sbjct: 216 FERLGITPPKGVILYGPPGTGKTLIARAVANESGAN--------FLSIN------GPEIM 261
Query: 306 -------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDI 358
Q L S+A + APSI+ D +DSI + +G + V+A L+D
Sbjct: 262 SKYYGQSEQKLREIFSKAEETAPSIIFIDEIDSIAPKREEVQG-EVERRVVAQLLTLMDG 320
Query: 359 MDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHE 418
M E G + + + ++ I +L GRFD +++ P + RK IL
Sbjct: 321 MKERGH----------VIVIGATNRIDAIDPALRRPGRFDREIEIGVPDRNGRKEILMIH 370
Query: 419 IQRRSLECSDE----ILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHS---DSSFEKH 471
+ L S+E L ++A G+ DL LV + A+ RYL D
Sbjct: 371 TRNMPLGMSEEEKNKFLEEMADYTYGFVGADLAALVRESAMNALRRYLPEIDLDKPIPTE 430
Query: 472 I--KPTLVRDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPS 529
I K + DDF A+ P ++R++ E WDD+GGL D++ IKE +ELP
Sbjct: 431 ILEKMVVTEDDFKNALKSIEPSSLREVM---VEVPNVHWDDIGGLEDVKREIKETVELPL 487
Query: 530 KFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQ 589
P++F + +R LLYGPPG GKT + A A + FIS+KGPE+L+K++G SE+
Sbjct: 488 LKPDVFKRLGIRPSKGFLLYGPPGVGKTLLAKAVATESNANFISIKGPEVLSKWVGESEK 547
Query: 590 AVRDIFSKATAAAPCLLFFDEFDSIAPKRG-HDNTGVTDRVVNQFLTELDGVEVLTGVFV 648
A+R+IF KA AP ++F DE DSIAP+RG ++GVT+R+VNQ LT LDG+EV+ GV V
Sbjct: 548 AIREIFKKAKQVAPAIVFLDEIDSIAPRRGTTSDSGVTERIVNQLLTSLDGIEVMNGVVV 607
Query: 649 FAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMT 708
AT+RPD++D ALLR GR D+L++ P RL ILKV ++ +PLA DVDL IA T
Sbjct: 608 IGATNRPDIMDPALLRAGRFDKLIYIPPPDKEARLSILKVHTKNMPLAPDVDLNDIAQRT 667
Query: 709 EGFSGADLQALLSDAQLSAVHEILNNIDSNEPGKMPVITDALLKSIASKARPSVSEAEKL 768
EG+ GADL+ L +A ++A E N D+ + + DA LK+I RPSV E E +
Sbjct: 668 EGYVGADLENLCREAGMNAYRE---NPDATSVSQKNFL-DA-LKTI----RPSVDE-EVI 717
Query: 769 RLYSIYGQFLDSKKSVAAQSR 789
+ Y + + KSV+ + +
Sbjct: 718 KFYRTLSETMS--KSVSERRK 736
Score = 196 bits (498), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 106/244 (43%), Positives = 145/244 (59%), Gaps = 5/244 (2%)
Query: 502 EGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVG 561
E R ++D+GGL++ I+EMIELP K P +F + + V+LYGPPG GKT I
Sbjct: 183 EVSRISYEDIGGLSEQLGKIREMIELPLKHPELFERLGITPPKGVILYGPPGTGKTLIAR 242
Query: 562 AAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHD 621
A A F+S+ GPE+++KY G SEQ +R+IFSKA AP ++F DE DSIAPKR
Sbjct: 243 AVANESGANFLSINGPEIMSKYYGQSEQKLREIFSKAEETAPSIIFIDEIDSIAPKREEV 302
Query: 622 NTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRE 681
V RVV Q LT +DG++ V V AT+R D +D AL RPGR DR + P
Sbjct: 303 QGEVERRVVAQLLTLMDGMKERGHVIVIGATNRIDAIDPALRRPGRFDREIEIGVPDRNG 362
Query: 682 RLDILKVISRKLPLADDVD-----LEAIAHMTEGFSGADLQALLSDAQLSAVHEILNNID 736
R +IL + +R +PL + LE +A T GF GADL AL+ ++ ++A+ L ID
Sbjct: 363 RKEILMIHTRNMPLGMSEEEKNKFLEEMADYTYGFVGADLAALVRESAMNALRRYLPEID 422
Query: 737 SNEP 740
++P
Sbjct: 423 LDKP 426
>sp|O28972|Y1297_ARCFU Cell division cycle protein 48 homolog AF_1297 OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=AF_1297 PE=3 SV=1
Length = 733
Score = 316 bits (810), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 193/538 (35%), Positives = 295/538 (54%), Gaps = 50/538 (9%)
Query: 247 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII- 305
F + P +L++GPPG+GKT +AKAVA ++ H F+ S GP I
Sbjct: 208 FQRLGIEPPKGVLLYGPPGTGKTLIAKAVANEVDAH--------FIPIS------GPEIM 253
Query: 306 -------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDI 358
Q L EA ++APSI+ D +DSI + G + V+A L+D
Sbjct: 254 SKYYGESEQRLREIFEEAKENAPSIIFIDEIDSIAPKREEVTG-EVERRVVAQLLALMDG 312
Query: 359 MDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHE 418
++ G+ + +A+ + I +L GRFD +++ P RK ILE
Sbjct: 313 LEARGD----------VIVIAATNRPDAIDPALRRPGRFDREIEIGVPDKEGRKEILE-- 360
Query: 419 IQRRSLECSDEI-LLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLV 477
I R + ++++ L ++A +G+ DLE L A+ R L + I ++
Sbjct: 361 IHTRKMPLAEDVDLEELAELTNGFVGADLEALCKEAAMHALRRVLPEIDIEAEEIPAEVI 420
Query: 478 ------RDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKF 531
R+DF +A+ P AMR++ E W+D+GGL + + E +E P K+
Sbjct: 421 ENLKVTREDFMEALKNIEPSAMREVL---VEVPNVKWEDIGGLEHAKQELMEAVEWPLKY 477
Query: 532 PNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAV 591
P +F A ++ +LL+GPPG GKT + A A + FISVKGPELL+K++G SE+ V
Sbjct: 478 PEVFRAANIKPPRGILLFGPPGTGKTLLAKAVANESNANFISVKGPELLSKWVGESEKHV 537
Query: 592 RDIFSKATAAAPCLLFFDEFDSIAPKRGH-DNTGVTDRVVNQFLTELDGVEVLTGVFVFA 650
R++F KA APC++FFDE DS+AP+RG ++ VT+RVV+Q LTELDG+E L V V A
Sbjct: 538 REMFRKARQVAPCVIFFDEIDSLAPRRGGIGDSHVTERVVSQLLTELDGLEELKDVVVIA 597
Query: 651 ATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEG 710
AT+RPD++D ALLRPGRL+R ++ P + R++I K+ R PLADDV++E +A TEG
Sbjct: 598 ATNRPDMIDPALLRPGRLERHIYIPPPDKKARVEIFKIHLRGKPLADDVNIEELAEKTEG 657
Query: 711 FSGADLQALLSDAQLSAVHEI----LNNIDSNEPGKMPVITDALLKSIASKARPSVSE 764
+SGAD++A+ +A + A+ E+ + ++ E K IT + K RPS+++
Sbjct: 658 YSGADIEAVCREAGMLAIRELIKPGMTREEAKEAAKKLKITKKHFEEALKKVRPSLTK 715
Score = 217 bits (553), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 109/229 (47%), Positives = 144/229 (62%)
Query: 508 WDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAC 567
++D+GGL ++EMIELP K P +F + + VLLYGPPG GKT I A A
Sbjct: 181 YEDIGGLKRELRLVREMIELPLKHPELFQRLGIEPPKGVLLYGPPGTGKTLIAKAVANEV 240
Query: 568 SLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD 627
FI + GPE+++KY G SEQ +R+IF +A AP ++F DE DSIAPKR V
Sbjct: 241 DAHFIPISGPEIMSKYYGESEQRLREIFEEAKENAPSIIFIDEIDSIAPKREEVTGEVER 300
Query: 628 RVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILK 687
RVV Q L +DG+E V V AAT+RPD +D AL RPGR DR + P R +IL+
Sbjct: 301 RVVAQLLALMDGLEARGDVIVIAATNRPDAIDPALRRPGRFDREIEIGVPDKEGRKEILE 360
Query: 688 VISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEILNNID 736
+ +RK+PLA+DVDLE +A +T GF GADL+AL +A + A+ +L ID
Sbjct: 361 IHTRKMPLAEDVDLEELAELTNGFVGADLEALCKEAAMHALRRVLPEID 409
>sp|O74941|PEX1_SCHPO Peroxisomal ATPase pex1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=pex1 PE=3 SV=1
Length = 937
Score = 315 bits (808), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 174/485 (35%), Positives = 280/485 (57%), Gaps = 20/485 (4%)
Query: 254 LPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFI 313
L +I I+GP G GK++L ++ + + + + V CS + + +N
Sbjct: 371 LHQNIYINGPKGCGKSNLVHSLFDY--YSLNSIYFQMIVSCSEIDRSSFAKFQSFWNNVF 428
Query: 314 SEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGIG 373
+A + PSI+ D++ +ISSS+ E + FL + KRK
Sbjct: 429 IQAERYEPSIIYLDDVHCLISSSN--ENGELGFVEEREIAFLQHQIINLKRKRK------ 480
Query: 374 PIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLD 433
I F+ + ++L F + LP+ A + RK IL Q + + + +
Sbjct: 481 -IIFIGFGEEFLTFSENLVLPLLFQIKIALPSLAVTRRKEILTTIFQENFSDITMDSIEF 539
Query: 434 VASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVRDDFSQAMHEFLPVAM 493
++ K +GY DL + V R + A ++ + KH+ + + + + +F+P+ +
Sbjct: 540 ISVKTEGYLMTDLVLFVKRLLSEA---FVEKIQNGPKHL---MNKGLIEKTLKDFVPLQL 593
Query: 494 RDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPG 553
R K W D+ G+ + + A++++IE P K+ I+ Q LRL + +LL+G PG
Sbjct: 594 R---KAKFVKSSIRWIDIAGMQEAKEAVRDIIESPVKYSLIYKQCRLRLPTGILLFGYPG 650
Query: 554 CGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDS 613
CGKT++ A ++ ++FIS+KGPELL+KYIG SEQ VRD+FS+A A PC+LFFDEFDS
Sbjct: 651 CGKTYLASAISSTFPVQFISIKGPELLDKYIGKSEQGVRDLFSRAQMAKPCVLFFDEFDS 710
Query: 614 IAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLF 673
+AP+RG D+TGVTDRVVNQ LT++DG E L GV++ AAT+RPD++D ALLRPGRLD+L+F
Sbjct: 711 VAPRRGQDSTGVTDRVVNQILTQMDGAESLDGVYIVAATTRPDMIDPALLRPGRLDKLIF 770
Query: 674 CDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEILN 733
CD P+ ERL++L+ ++ + + + L+ ++ +T+G++ ADL +LL DA L AVH++L
Sbjct: 771 CDLPNEEERLEVLQKLANRFHIENAAMLKKLSTLTDGYTYADLSSLLYDAHLIAVHKLLK 830
Query: 734 NIDSN 738
+ N
Sbjct: 831 RVSIN 835
Score = 47.0 bits (110), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 86/215 (40%), Gaps = 34/215 (15%)
Query: 244 GLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGP 303
L + L LP IL+ G PG GKT LA A++ + + F+ KGP
Sbjct: 629 SLIYKQCRLRLPTGILLFGYPGCGKTYLASAISSTFP--------VQFISI------KGP 674
Query: 304 II--------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFL 355
+ Q + + S A P ++ FD DS+ P Q ST V
Sbjct: 675 ELLDKYIGKSEQGVRDLFSRAQMAKPCVLFFDEFDSV-----APRRGQDSTGVTD----- 724
Query: 356 VDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAIL 415
++++ + + + + VA+ + I +L GR D + P ER +L
Sbjct: 725 -RVVNQILTQMDGAESLDGVYIVAATTRPDMIDPALLRPGRLDKLIFCDLPNEEERLEVL 783
Query: 416 EHEIQRRSLECSDEILLDVASKCDGYDAYDLEILV 450
+ R +E + +L +++ DGY DL L+
Sbjct: 784 QKLANRFHIE-NAAMLKKLSTLTDGYTYADLSSLL 817
Score = 34.7 bits (78), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
Query: 531 FPNIFAQA--PLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFIS----VKGPELLNKYI 584
FP+ FAQ + L N+ + GP GCGK+++V + SL I V E+
Sbjct: 358 FPHEFAQVRNAVFLHQNIYINGPKGCGKSNLVHSLFDYYSLNSIYFQMIVSCSEIDRSSF 417
Query: 585 GASEQAVRDIFSKATAAAPCLLFFDE 610
+ ++F +A P +++ D+
Sbjct: 418 AKFQSFWNNVFIQAERYEPSIIYLDD 443
>sp|Q58556|Y1156_METJA Cell division cycle protein 48 homolog MJ1156 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ1156 PE=3 SV=1
Length = 903
Score = 310 bits (795), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 187/500 (37%), Positives = 271/500 (54%), Gaps = 46/500 (9%)
Query: 247 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII- 305
F + P +L+ GPPG+GKT LAKAVA + + GP I
Sbjct: 205 FEKLGIEPPKGVLLVGPPGTGKTLLAKAVANE--------------AGANFYVINGPEIM 250
Query: 306 -------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDI 358
+ L EA ++APSI+ D +D+I + G L L+ +
Sbjct: 251 SKYVGETEENLRKIFEEAEENAPSIIFIDEIDAIAPKRDEATGEVERR----LVAQLLTL 306
Query: 359 MDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHE 418
MD G G + + + + +L GRFD + + P RK IL+
Sbjct: 307 MD-------GLKGRGQVVVIGATNRPNALDPALRRPGRFDREIVIGVPDREGRKEILQ-- 357
Query: 419 IQRRSLECSDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLHS-DSSFEKHIKPTL 476
I R++ ++++ LD +A G+ DL L A+ R L S D E+ K L
Sbjct: 358 IHTRNMPLAEDVDLDYLADVTHGFVGADLAALCKEAAMRALRRVLPSIDLEAEEIPKEVL 417
Query: 477 -----VRDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKF 531
DDF +A+ + P AMR++ E W+D+GGL +++ ++E +E P K
Sbjct: 418 DNLKVTMDDFKEALKDVEPSAMREVL---VEVPNVKWEDIGGLEEVKQELREAVEWPLKA 474
Query: 532 PNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAV 591
+F + +R VLL+GPPG GKT + A A FISVKGPE+ +K++G SE+A+
Sbjct: 475 KEVFEKIGVRPPKGVLLFGPPGTGKTLLAKAVANESGANFISVKGPEIFSKWVGESEKAI 534
Query: 592 RDIFSKATAAAPCLLFFDEFDSIAPKRGHD-NTGVTDRVVNQFLTELDGVEVLTGVFVFA 650
R+IF KA +APC++FFDE D+IAPKRG D ++ VTD+VVNQ LTELDG+E V V A
Sbjct: 535 REIFRKARQSAPCIIFFDEIDAIAPKRGRDLSSAVTDKVVNQLLTELDGMEEPKDVVVIA 594
Query: 651 ATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEG 710
AT+RPD++D ALLRPGRLDR++ P + RLDI K+ +R + LA+DV+LE +A TEG
Sbjct: 595 ATNRPDIIDPALLRPGRLDRVILVPVPDEKARLDIFKIHTRSMNLAEDVNLEELAKKTEG 654
Query: 711 FSGADLQALLSDAQLSAVHE 730
++GAD++AL +A + AV E
Sbjct: 655 YTGADIEALCREAAMLAVRE 674
Score = 200 bits (509), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 98/229 (42%), Positives = 142/229 (62%)
Query: 508 WDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAC 567
++D+GGL + ++EMIELP + P +F + + VLL GPPG GKT + A A
Sbjct: 178 YEDIGGLKEEVKKVREMIELPMRHPELFEKLGIEPPKGVLLVGPPGTGKTLLAKAVANEA 237
Query: 568 SLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD 627
F + GPE+++KY+G +E+ +R IF +A AP ++F DE D+IAPKR V
Sbjct: 238 GANFYVINGPEIMSKYVGETEENLRKIFEEAEENAPSIIFIDEIDAIAPKRDEATGEVER 297
Query: 628 RVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILK 687
R+V Q LT +DG++ V V AT+RP+ LD AL RPGR DR + P R +IL+
Sbjct: 298 RLVAQLLTLMDGLKGRGQVVVIGATNRPNALDPALRRPGRFDREIVIGVPDREGRKEILQ 357
Query: 688 VISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEILNNID 736
+ +R +PLA+DVDL+ +A +T GF GADL AL +A + A+ +L +ID
Sbjct: 358 IHTRNMPLAEDVDLDYLADVTHGFVGADLAALCKEAAMRALRRVLPSID 406
>sp|Q07590|SAV_SULAC Protein SAV OS=Sulfolobus acidocaldarius (strain ATCC 33909 / DSM
639 / JCM 8929 / NBRC 15157 / NCIMB 11770) GN=sav PE=3
SV=2
Length = 780
Score = 306 bits (785), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 181/510 (35%), Positives = 284/510 (55%), Gaps = 48/510 (9%)
Query: 247 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII- 305
F + P IL++GPPG+GKT LA+A+A + + F+ + GP I
Sbjct: 238 FQRLGIDPPKGILLYGPPGTGKTLLARALANEIGAY--------FITVN------GPEIM 283
Query: 306 -------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDI 358
Q + EA ++APSI+ D +D+I D G + V+A L+ +
Sbjct: 284 SKFYGESEQRIREIFKEAEENAPSIIFIDEIDAIAPKREDVTG-EVEKRVVAQ---LLTL 339
Query: 359 MDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHE 418
MD G K G G + + + + I +L GRFD +++ P RK IL+
Sbjct: 340 MD--GIK-----GRGRVIVIGATNRPDAIDPALRRPGRFDREIEIRPPDTKGRKDILQ-- 390
Query: 419 IQRRSLECSDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLHSDS-SFEKHIKPTL 476
+ R++ +D++ LD +A GY DL L A+ R++ + ++ P
Sbjct: 391 VHTRNMPITDDVDLDKLAEMTYGYTGADLAALAKEAAIYALRRFVDEKKLNLDQPTIPAE 450
Query: 477 VRDDFSQAMHEFL-------PVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPS 529
+ + +M++FL P +R++ E + W+D+GGL +++ ++E +E P
Sbjct: 451 IIKELKVSMNDFLNALKSIQPSLLREV---YVEVPKVNWNDIGGLDNVKQQLREAVEWPL 507
Query: 530 KFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQ 589
+FP +F ++ + +LL+GPPG GKT + A A FI+V+GPE+L+K++G SE+
Sbjct: 508 RFPELFTKSGVTPPKGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEILSKWVGESEK 567
Query: 590 AVRDIFSKATAAAPCLLFFDEFDSIAPKRG-HDNTGVTDRVVNQFLTELDGVEVLTGVFV 648
A+R+IF KA AAP ++FFDE DSIAP RG ++GVT+R+VNQ L E+DG+ L V +
Sbjct: 568 AIREIFRKARQAAPTVIFFDEIDSIAPIRGLSTDSGVTERIVNQLLAEMDGIVPLNKVVI 627
Query: 649 FAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMT 708
AAT+RPD+LD ALLRPGR DRL++ P R +ILKV ++ +PLA+DV LE IA
Sbjct: 628 IAATNRPDILDPALLRPGRFDRLIYVPPPDKTARFEILKVHTKNVPLAEDVSLEDIAEKA 687
Query: 709 EGFSGADLQALLSDAQLSAVHEILNNIDSN 738
EG++GADL+AL+ +A ++A+ I + D
Sbjct: 688 EGYTGADLEALVREATINAMRSIYSMCDKQ 717
Score = 203 bits (516), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 101/230 (43%), Positives = 146/230 (63%), Gaps = 2/230 (0%)
Query: 505 RSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAA 564
+ W+D+G L + + I+E++E P + P +F + + +LLYGPPG GKT + A A
Sbjct: 208 KVSWEDIGDLEEAKQKIREIVEWPMRHPELFQRLGIDPPKGILLYGPPGTGKTLLARALA 267
Query: 565 AACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTG 624
FI+V GPE+++K+ G SEQ +R+IF +A AP ++F DE D+IAPKR D TG
Sbjct: 268 NEIGAYFITVNGPEIMSKFYGESEQRIREIFKEAEENAPSIIFIDEIDAIAPKR-EDVTG 326
Query: 625 -VTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERL 683
V RVV Q LT +DG++ V V AT+RPD +D AL RPGR DR + P + R
Sbjct: 327 EVEKRVVAQLLTLMDGIKGRGRVIVIGATNRPDAIDPALRRPGRFDREIEIRPPDTKGRK 386
Query: 684 DILKVISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEILN 733
DIL+V +R +P+ DDVDL+ +A MT G++GADL AL +A + A+ ++
Sbjct: 387 DILQVHTRNMPITDDVDLDKLAEMTYGYTGADLAALAKEAAIYALRRFVD 436
>sp|P32794|AFG2_YEAST ATPase family gene 2 protein OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=AFG2 PE=1 SV=1
Length = 780
Score = 296 bits (758), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 183/496 (36%), Positives = 273/496 (55%), Gaps = 32/496 (6%)
Query: 246 WFSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII 305
FS++ + P IL+HGPPG+GKT L + VA + AH++ + + +
Sbjct: 270 LFSSFGVSPPRGILLHGPPGTGKTMLLRVVANTSN------AHVLTINGPSIVSKYLGET 323
Query: 306 RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEK 365
AL + +EA + PSI+ D +DSI + ++ + + + V+A L+ +MD G
Sbjct: 324 EAALRDIFNEARKYQPSIIFIDEIDSIAPNRANDDSGEVESRVVAT---LLTLMDGMG-- 378
Query: 366 RKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLE 425
G + +A+ + +L GRFD V++ P R IL + R S
Sbjct: 379 -----AAGKVVVIAATNRPNSVDPALRRPGRFDQEVEIGIPDVDARFDILTKQFSRMS-- 431
Query: 426 CSDEILLD------VASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKH-IKPTLVR 478
SD +LD +ASK GY DL L +V + R L +D++ +K +K TL
Sbjct: 432 -SDRHVLDSEAIKYIASKTHGYVGADLTALCRESVMKTIQRGLGTDANIDKFSLKVTL-- 488
Query: 479 DDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQA 538
D AM + P AMR+I E + W D+GG +++ +KEMI+LP + FA+
Sbjct: 489 KDVESAMVDIRPSAMREIF---LEMPKVYWSDIGGQEELKTKMKEMIQLPLEASETFARL 545
Query: 539 PLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKA 598
+ VLLYGPPGC KT A A + F++VKGPE+ NKY+G SE+A+R+IF KA
Sbjct: 546 GISAPKGVLLYGPPGCSKTLTAKALATESGINFLAVKGPEIFNKYVGESERAIREIFRKA 605
Query: 599 TAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLL 658
+AAP ++FFDE D+++P R +T + V+ L E+DGVE L GV + AAT+RPD +
Sbjct: 606 RSAAPSIIFFDEIDALSPDRDGSSTSAANHVLTSLLNEIDGVEELKGVVIVAATNRPDEI 665
Query: 659 DAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADD-VDLEAIAHMTEGFSGADLQ 717
DAALLRPGRLDR ++ P RL+ILK ++K + VDL +A TEG+SGA++
Sbjct: 666 DAALLRPGRLDRHIYVGPPDVNARLEILKKCTKKFNTEESGVDLHELADRTEGYSGAEVV 725
Query: 718 ALLSDAQLSAVHEILN 733
L +A L+A+ E L+
Sbjct: 726 LLCQEAGLAAIMEDLD 741
>sp|Q9HPF0|CDCH_HALSA Protein CdcH OS=Halobacterium salinarum (strain ATCC 700922 / JCM
11081 / NRC-1) GN=cdcH PE=3 SV=1
Length = 742
Score = 295 bits (755), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 193/551 (35%), Positives = 284/551 (51%), Gaps = 57/551 (10%)
Query: 247 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII- 305
F + P +L+HGPPG+GKT LAKAVA S S+ II
Sbjct: 215 FQKLGIEPPQGVLLHGPPGTGKTLLAKAVANE-------------TSASFFSIAGPEIIS 261
Query: 306 ------RQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIM 359
Q L +A D +PSI+ D LDSI D G + V+A ++D +
Sbjct: 262 KYYGESEQQLREIFEDAKDDSPSIIFIDELDSIAPKREDVTG-EVERRVVAQLLTMMDGL 320
Query: 360 DEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEI 419
+ G G + +A+ ++ + +L GRFD +++ P R+ IL+ I
Sbjct: 321 E----------GRGQVIVIAATNRVDAVDPALRRPGRFDREIEIGVPDEIGREEILK--I 368
Query: 420 QRRSLECSDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLV- 477
R + SD++ L +A G+ D+E L A+ RYL E+ I P+L+
Sbjct: 369 HTRGMPLSDDVNLSTLADDTHGFVGADIESLSKEAAMRALRRYLPEIDLDEEDIPPSLID 428
Query: 478 -----RDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFP 532
R+DF A+ E P AMR++ E + WDDVGGLT+ +N +KE +E P P
Sbjct: 429 RMIVKREDFKGALSEVEPSAMREVL---VELPKITWDDVGGLTEAKNNVKESVEWPLNQP 485
Query: 533 NIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVR 592
F + + + VLLYGPPG GKT + A A + FISV+GP+LL+K++G SE+A+R
Sbjct: 486 EKFTRMGVEPPAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIR 545
Query: 593 DIFSKATAAAPCLLFFDEFDSIAPKRGHD-NTGVTDRVVNQFLTELDGVEVLTGVFVFAA 651
F KA AP ++FFDE DS+AP RG V++RVVNQ LTELDG+E + V V AA
Sbjct: 546 QTFRKARQVAPTVIFFDELDSLAPGRGQTGGNNVSERVVNQLLTELDGLEEMEEVMVIAA 605
Query: 652 TSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGF 711
T+RPD++D AL+R GR DRL+ P R ILK+ ++ PLA DV L +A +G+
Sbjct: 606 TNRPDIIDPALIRSGRFDRLVQVGQPGIEGREQILKIHTQDTPLAADVSLRELAERADGY 665
Query: 712 SGADLQALLSDAQLSAVHEILNNIDSNEPGKMPVITDALLKSIASKARPSVSEAEKLRLY 771
G+DL + +A + A+ ++ D+++ G A ++ RP++++ L
Sbjct: 666 VGSDLANIAREAAIEALR---DDEDADDVGM------AHFRAAMENVRPTITDD----LM 712
Query: 772 SIYGQFLDSKK 782
Y Q D K
Sbjct: 713 EYYDQVEDQFK 723
Score = 204 bits (518), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 111/250 (44%), Positives = 153/250 (61%), Gaps = 2/250 (0%)
Query: 503 GGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGA 562
GG ++D+GGL + ++EM+ELP K P IF + + VLL+GPPG GKT + A
Sbjct: 183 GGGITYEDIGGLENEIQRVREMVELPMKHPQIFQKLGIEPPQGVLLHGPPGTGKTLLAKA 242
Query: 563 AAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDN 622
A S F S+ GPE+++KY G SEQ +R+IF A +P ++F DE DSIAPKR D
Sbjct: 243 VANETSASFFSIAGPEIISKYYGESEQQLREIFEDAKDDSPSIIFIDELDSIAPKR-EDV 301
Query: 623 TG-VTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRE 681
TG V RVV Q LT +DG+E V V AAT+R D +D AL RPGR DR + P
Sbjct: 302 TGEVERRVVAQLLTMMDGLEGRGQVIVIAATNRVDAVDPALRRPGRFDREIEIGVPDEIG 361
Query: 682 RLDILKVISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEILNNIDSNEPG 741
R +ILK+ +R +PL+DDV+L +A T GF GAD+++L +A + A+ L ID +E
Sbjct: 362 REEILKIHTRGMPLSDDVNLSTLADDTHGFVGADIESLSKEAAMRALRRYLPEIDLDEED 421
Query: 742 KMPVITDALL 751
P + D ++
Sbjct: 422 IPPSLIDRMI 431
>sp|Q3UMC0|SPAT5_MOUSE Spermatogenesis-associated protein 5 OS=Mus musculus GN=Spata5 PE=2
SV=2
Length = 893
Score = 293 bits (751), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 175/491 (35%), Positives = 272/491 (55%), Gaps = 26/491 (5%)
Query: 247 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 306
F +Y +P P +L++GPPG+GKT +A+AVA + + ++ + S+ E +R
Sbjct: 379 FKSYGIPAPRGLLLYGPPGTGKTMIARAVANEVGAYVSVINGPEII--SKFYGETEARLR 436
Query: 307 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 366
Q +EA PSI+ D LD++ EG+Q + L +MD G
Sbjct: 437 Q----IFAEATLRHPSIIFIDELDALCPKR---EGAQSEVEKRVVASLLT-LMDGIG--- 485
Query: 367 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 426
S G + + + + + +L GRFD +++ P A +R IL+ ++R
Sbjct: 486 -SEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEIGIPNAQDRLDILQKLLRRVPHLL 544
Query: 427 SDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHS-----DSSFEKHIKPTLVRDDF 481
+ LL +A+ GY DL+ L + A+ R L DS +K TL +DF
Sbjct: 545 TKAELLRLANNAHGYVGADLKALCNEAGLHALRRVLRKQPNLPDSKVAGMVKITL--NDF 602
Query: 482 SQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLR 541
Q M++ P AMR++ + + W D+GGL +I+ +K+ +E P K P F + ++
Sbjct: 603 LQGMNDIRPSAMREV---AIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPKSFNRMGIQ 659
Query: 542 LRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAA 601
VLLYGPPGC KT I A A L F+++KGPEL+NKY+G SE+AVR+IF KA A
Sbjct: 660 PPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRKARAV 719
Query: 602 APCLLFFDEFDSIAPKRGHDNTG--VTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLD 659
AP ++FFDE D++A +RG + V DRV+ Q LTE+DG+E L V V AAT+RPD +D
Sbjct: 720 APSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVTVLAATNRPDRID 779
Query: 660 AALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGADLQAL 719
AL+RPGR+DR+++ P R +IL + +P++++VDL+ + T+ +SGA++ A+
Sbjct: 780 KALMRPGRIDRIIYVPLPDAATRREILNLQFHSMPISNEVDLDELVLQTDTYSGAEIIAV 839
Query: 720 LSDAQLSAVHE 730
+A L A+ E
Sbjct: 840 CKEAALLALEE 850
Score = 170 bits (431), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/262 (38%), Positives = 150/262 (57%), Gaps = 9/262 (3%)
Query: 508 WDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAC 567
+D +GGL AI+E+IELP K P +F + +LLYGPPG GKT I A A
Sbjct: 352 YDMIGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVANEV 411
Query: 568 SLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD 627
+ GPE+++K+ G +E +R IF++AT P ++F DE D++ PKR + V
Sbjct: 412 GAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREGAQSEVEK 471
Query: 628 RVVNQFLTELDGV--EVLTG-VFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLD 684
RVV LT +DG+ E G V V AT+RP LDAAL RPGR D+ + P+ ++RLD
Sbjct: 472 RVVASLLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEIGIPNAQDRLD 531
Query: 685 ILKVISRKLP-LADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEIL----NNIDSNE 739
IL+ + R++P L +L +A+ G+ GADL+AL ++A L A+ +L N DS
Sbjct: 532 ILQKLLRRVPHLLTKAELLRLANNAHGYVGADLKALCNEAGLHALRRVLRKQPNLPDSKV 591
Query: 740 PGKMPVITDALLKSIASKARPS 761
G + + + L+ + + RPS
Sbjct: 592 AGMVKITLNDFLQGM-NDIRPS 612
>sp|Q8NB90|SPAT5_HUMAN Spermatogenesis-associated protein 5 OS=Homo sapiens GN=SPATA5 PE=1
SV=3
Length = 893
Score = 290 bits (742), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 171/489 (34%), Positives = 268/489 (54%), Gaps = 22/489 (4%)
Query: 247 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 306
F +Y +P P +L++GPPG+GKT +A+AVA + + ++ + S+ E +R
Sbjct: 379 FKSYGIPAPRGVLLYGPPGTGKTMIARAVANEVGAYVSVINGPEII--SKFYGETEAKLR 436
Query: 307 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 366
Q +EA PSI+ D LD++ EG+Q + L +MD G
Sbjct: 437 Q----IFAEATLRHPSIIFIDELDALCPKR---EGAQNEVEKRVVASLLT-LMDGIG--- 485
Query: 367 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 426
S G + + + + +L GRFD +++ P A +R IL+ ++R
Sbjct: 486 -SEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAQDRLDILQKLLRRVPHLL 544
Query: 427 SDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVR---DDFSQ 483
++ LL +A+ GY DL++L + A+ R L + LV+ DF Q
Sbjct: 545 TEAELLQLANSAHGYVGADLKVLCNEAGLCALRRILKKQPNLPDVKVAGLVKITLKDFLQ 604
Query: 484 AMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLR 543
AM++ P AMR+I + + W D+GGL I+ +++ +E P K P F + ++
Sbjct: 605 AMNDIRPSAMREI---AIDVPNVSWSDIGGLESIKLKLEQAVEWPLKHPESFIRMGIQPP 661
Query: 544 SNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAP 603
VLLYGPPGC KT I A A L F+++KGPEL+NKY+G SE+AVR+ F KA A AP
Sbjct: 662 KGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRETFRKARAVAP 721
Query: 604 CLLFFDEFDSIAPKRGHD--NTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAA 661
++FFDE D++A +RG V DRV+ Q LTE+DG+E L V + AAT+RPD +D A
Sbjct: 722 SIIFFDELDALAVERGSSLGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRPDRIDKA 781
Query: 662 LLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGADLQALLS 721
L+RPGR+DR+++ P R +I K+ +P++++VDL+ + T+ +SGA++ A+
Sbjct: 782 LMRPGRIDRIIYVPLPDAATRREIFKLQFHSMPVSNEVDLDELILQTDAYSGAEIVAVCR 841
Query: 722 DAQLSAVHE 730
+A L A+ E
Sbjct: 842 EAALLALEE 850
Score = 172 bits (437), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 96/229 (41%), Positives = 137/229 (59%), Gaps = 4/229 (1%)
Query: 508 WDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAC 567
+D +GGL+ AI+E+IELP K P +F + VLLYGPPG GKT I A A
Sbjct: 352 YDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARAVANEV 411
Query: 568 SLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD 627
+ GPE+++K+ G +E +R IF++AT P ++F DE D++ PKR V
Sbjct: 412 GAYVSVINGPEIISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALCPKREGAQNEVEK 471
Query: 628 RVVNQFLTELDGV--EVLTG-VFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLD 684
RVV LT +DG+ EV G V V AT+RP LDAAL RPGR D+ + P+ ++RLD
Sbjct: 472 RVVASLLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAQDRLD 531
Query: 685 ILKVISRKLP-LADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEIL 732
IL+ + R++P L + +L +A+ G+ GADL+ L ++A L A+ IL
Sbjct: 532 ILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKVLCNEAGLCALRRIL 580
>sp|P23787|TERA_XENLA Transitional endoplasmic reticulum ATPase OS=Xenopus laevis GN=vcp
PE=1 SV=3
Length = 805
Score = 288 bits (736), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 199/572 (34%), Positives = 298/572 (52%), Gaps = 47/572 (8%)
Query: 247 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 306
F + P IL++GPPG+GKT +A+AVA L+ + S+L+ E +R
Sbjct: 230 FKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIM--SKLAGESESNLR 287
Query: 307 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 366
+A EA +AP+I+ D LD+I G V L + +MD G K+
Sbjct: 288 KAFE----EAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQL----LTLMD--GLKQ 337
Query: 367 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 426
++ + +A+ I +L GRFD V + P ++ R IL+ I ++++
Sbjct: 338 RAH-----VIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEILQ--IHTKNMKL 390
Query: 427 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL--VRD 479
SD++ L+ VA++ G+ DL L A+ + + D + + + +L D
Sbjct: 391 SDDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMD 450
Query: 480 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 539
DF A+ + P A+R+ T E + W+D+GGL D++ ++E+++ P + P+ F +
Sbjct: 451 DFRWALSQSNPSALRE---TVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFG 507
Query: 540 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 599
+ VL YGPPGCGKT + A A C FIS+KGPELL + G SE VR+IF KA
Sbjct: 508 MTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKAR 567
Query: 600 AAAPCLLFFDEFDSIAPKR---GHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPD 656
AAPC+LFFDE DSIA R D G DRV+NQ LTE+DG+ + VF+ AT+RPD
Sbjct: 568 QAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSIKKNVFIIGATNRPD 627
Query: 657 LLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGADL 716
++D A+LRPGRLD+L++ P + R+ ILK RK P+A DVD++ +A MT GFSGADL
Sbjct: 628 IIDPAILRPGRLDQLIYIPLPDEKSRMAILKANLRKSPVAKDVDVDFLAKMTNGFSGADL 687
Query: 717 QALLSDAQLSAVHEILNNIDSNE------PGKMPVITDALLKSIASK--------ARPSV 762
+ A A+ E + N E P M V D + I AR SV
Sbjct: 688 TEICQRACKLAIRESIENEIRRERDRQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSV 747
Query: 763 SEAEKLRLYSIYGQFLDSKKSVAAQSRDAKGK 794
S+ + +R Y ++ Q L + + A G+
Sbjct: 748 SDND-IRKYEMFAQTLQQSRGFGSFRFPAGGQ 778
Score = 187 bits (475), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 99/230 (43%), Positives = 140/230 (60%)
Query: 507 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 566
G+DD+GG IKEM+ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 202 GYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE 261
Query: 567 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 626
F + GPE+++K G SE +R F +A AP ++F DE D+IAPKR + V
Sbjct: 262 TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE 321
Query: 627 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 686
R+V+Q LT +DG++ V V AAT+RP+ +D AL R GR DR + P RL+IL
Sbjct: 322 RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEIL 381
Query: 687 KVISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEILNNID 736
++ ++ + L+DDVDLE +A+ T G GADL AL S+A L A+ + ++ ID
Sbjct: 382 QIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLID 431
>sp|Q7KN62|TERA_DROME Transitional endoplasmic reticulum ATPase TER94 OS=Drosophila
melanogaster GN=TER94 PE=1 SV=1
Length = 801
Score = 284 bits (727), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 192/568 (33%), Positives = 291/568 (51%), Gaps = 48/568 (8%)
Query: 247 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 306
F + P IL++GPPG+GKT +A+AVA L+ + S+L+ E +R
Sbjct: 227 FKAIGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIM--SKLAGESESNLR 284
Query: 307 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 366
+A EA ++P+I+ D +D+I G + L+ +MD G K+
Sbjct: 285 KAFE----EAEKNSPAIIFIDEIDAIAPKRDKTHGEVERR----IVSQLLTLMD--GMKK 334
Query: 367 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 426
S + +A+ I +L GRFD + + P A+ R +L I ++++
Sbjct: 335 SSH-----LIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEVLR--IHTKNMKL 387
Query: 427 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL--VRD 479
D++ L+ +A++ G+ DL L + + D + + +L +
Sbjct: 388 HDDVDLEQIAAESHGHVGADLASLCSEAALQQIREKMDLIDLEDDKIDAEVLASLAVTME 447
Query: 480 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 539
+F AM + P A+R+ T E + W D+GGL ++ ++E+++ P + P+ F +
Sbjct: 448 NFRYAMTKSSPSALRE---TVVEVPNTTWTDIGGLESVKKELQELVQYPVEHPDKFLKFG 504
Query: 540 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 599
++ VL YGPPGCGKT + A A C FISVKGPELL + G SE VRDIF KA
Sbjct: 505 MQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKAR 564
Query: 600 AAAPCLLFFDEFDSIAPKRG---HDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPD 656
+AAPC+LFFDE DSIA RG D G DRV+NQ LTE+DG+ VF+ AT+RPD
Sbjct: 565 SAAPCVLFFDELDSIAKARGGNVGDAGGAADRVINQILTEMDGMGAKKNVFIIGATNRPD 624
Query: 657 LLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGADL 716
++D A+LRPGRLD+L++ P + R ILK RK PLA +VDL IA +T+GFSGADL
Sbjct: 625 IIDPAILRPGRLDQLIYIPLPDDKSREAILKANLRKSPLAKEVDLTYIAKVTQGFSGADL 684
Query: 717 QALLSDAQLSAVHEIL---------------NNIDSNEPGKMPVITDALLKSIASKARPS 761
+ A A+ + + + +D +E +P IT A + AR S
Sbjct: 685 TEICQRACKLAIRQAIEAEIRREKERAENQNSAMDMDEDDPVPEITSAHFEEAMKFARRS 744
Query: 762 VSEAEKLRLYSIYGQFLDSKKSVAAQSR 789
VS+ + +R Y ++ Q L + R
Sbjct: 745 VSDND-IRKYEMFAQTLQQSRGFGQNFR 771
Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 94/230 (40%), Positives = 139/230 (60%)
Query: 507 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 566
G+DD+GG IKEM+ELP + P++F ++ +L+YGPPG GKT I A A
Sbjct: 199 GYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVANE 258
Query: 567 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 626
F + GPE+++K G SE +R F +A +P ++F DE D+IAPKR + V
Sbjct: 259 TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDEIDAIAPKRDKTHGEVE 318
Query: 627 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 686
R+V+Q LT +DG++ + + V AAT+RP+ +D AL R GR DR + P RL++L
Sbjct: 319 RRIVSQLLTLMDGMKKSSHLIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEVL 378
Query: 687 KVISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEILNNID 736
++ ++ + L DDVDLE IA + G GADL +L S+A L + E ++ ID
Sbjct: 379 RIHTKNMKLHDDVDLEQIAAESHGHVGADLASLCSEAALQQIREKMDLID 428
>sp|Q6GL04|TERA_XENTR Transitional endoplasmic reticulum ATPase OS=Xenopus tropicalis
GN=vcp PE=2 SV=1
Length = 805
Score = 283 bits (725), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 195/560 (34%), Positives = 290/560 (51%), Gaps = 47/560 (8%)
Query: 247 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 306
F + P IL++GPPG+GKT +A+AVA L+ + S+L+ E +R
Sbjct: 230 FKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIM--SKLAGESESNLR 287
Query: 307 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 366
+A EA +AP+I+ D LD+I G + L+ +MD G K+
Sbjct: 288 KAFE----EAEKNAPAIIFIDELDAIAPKREKTHGEVERR----IVSQLLTLMD--GLKQ 337
Query: 367 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 426
++ + +A+ I +L GRFD V + P ++ R IL+ I ++++
Sbjct: 338 RAH-----VIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEILQ--IHTKNMKL 390
Query: 427 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL--VRD 479
SD++ L+ VA++ G+ DL L A+ + + D + + + +L D
Sbjct: 391 SDDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMD 450
Query: 480 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 539
DF A+ + P A+R+ T E + W+D+GGL D++ ++E+++ P + P+ F +
Sbjct: 451 DFRWALSQSNPSALRE---TVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFG 507
Query: 540 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 599
+ VL YGPPGCGKT + A A C FIS+KGPELL + G SE VR+IF KA
Sbjct: 508 MTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKAR 567
Query: 600 AAAPCLLFFDEFDSIAPKR---GHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPD 656
AAPC+LFFDE DSIA R D G DRV+NQ LTE+DG+ VF+ AT+RPD
Sbjct: 568 QAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPD 627
Query: 657 LLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGADL 716
++D A+LRPGRLD+L++ P + R+ ILK RK P+A DVDL+ +A MT GFSGADL
Sbjct: 628 IIDPAILRPGRLDQLIYIPLPDEKSRIAILKANLRKSPVAKDVDLDFLAKMTNGFSGADL 687
Query: 717 QALLSDAQLSAVHE------ILNNIDSNEPGKMPVITDALLKSIASK--------ARPSV 762
+ A A+ E P M V D + I AR SV
Sbjct: 688 TEICQRACKLAIRESIENEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSV 747
Query: 763 SEAEKLRLYSIYGQFLDSKK 782
S+ + +R Y ++ Q L +
Sbjct: 748 SDND-IRKYEMFAQTLQQSR 766
Score = 187 bits (474), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 99/230 (43%), Positives = 140/230 (60%)
Query: 507 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 566
G+DD+GG IKEM+ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 202 GYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE 261
Query: 567 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 626
F + GPE+++K G SE +R F +A AP ++F DE D+IAPKR + V
Sbjct: 262 TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE 321
Query: 627 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 686
R+V+Q LT +DG++ V V AAT+RP+ +D AL R GR DR + P RL+IL
Sbjct: 322 RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLEIL 381
Query: 687 KVISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEILNNID 736
++ ++ + L+DDVDLE +A+ T G GADL AL S+A L A+ + ++ ID
Sbjct: 382 QIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLID 431
>sp|P46462|TERA_RAT Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus
GN=Vcp PE=1 SV=3
Length = 806
Score = 282 bits (722), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 180/487 (36%), Positives = 266/487 (54%), Gaps = 32/487 (6%)
Query: 247 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 306
F + P IL++GPPG+GKT +A+AVA L+ + S+L+ E +R
Sbjct: 230 FKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIM--SKLAGESESNLR 287
Query: 307 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 366
+A EA +AP+I+ D LD+I G + L+ +MD G K+
Sbjct: 288 KAFE----EAEKNAPAIIFIDELDAIAPKREKTHGEVERR----IVSQLLTLMD--GLKQ 337
Query: 367 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 426
++ + +A+ I +L GRFD V + P A+ R IL+ I ++++
Sbjct: 338 RAH-----VIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQ--IHTKNMKL 390
Query: 427 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL--VRD 479
+D++ L+ VA++ G+ DL L A+ + + D + + + +L D
Sbjct: 391 ADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMD 450
Query: 480 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 539
DF A+ + P A+R+ T E + W+D+GGL D++ ++E+++ P + P+ F +
Sbjct: 451 DFRWALSQSNPSALRE---TVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFG 507
Query: 540 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 599
+ VL YGPPGCGKT + A A C FIS+KGPELL + G SE VR+IF KA
Sbjct: 508 MTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKAR 567
Query: 600 AAAPCLLFFDEFDSIAPKR---GHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPD 656
AAPC+LFFDE DSIA R D G DRV+NQ LTE+DG+ VF+ AT+RPD
Sbjct: 568 QAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPD 627
Query: 657 LLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGADL 716
++D A+LRPGRLD+L++ P + R+ ILK RK P+A DVDLE +A MT GFSGADL
Sbjct: 628 IIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADL 687
Query: 717 QALLSDA 723
+ A
Sbjct: 688 TEICQRA 694
Score = 188 bits (477), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 100/230 (43%), Positives = 140/230 (60%)
Query: 507 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 566
G+DD+GG IKEM+ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 202 GYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE 261
Query: 567 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 626
F + GPE+++K G SE +R F +A AP ++F DE D+IAPKR + V
Sbjct: 262 TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE 321
Query: 627 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 686
R+V+Q LT +DG++ V V AAT+RP+ +D AL R GR DR + P RL+IL
Sbjct: 322 RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEIL 381
Query: 687 KVISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEILNNID 736
++ ++ + LADDVDLE +A+ T G GADL AL S+A L A+ + ++ ID
Sbjct: 382 QIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLID 431
>sp|Q01853|TERA_MOUSE Transitional endoplasmic reticulum ATPase OS=Mus musculus GN=Vcp
PE=1 SV=4
Length = 806
Score = 282 bits (721), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 180/487 (36%), Positives = 266/487 (54%), Gaps = 32/487 (6%)
Query: 247 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 306
F + P IL++GPPG+GKT +A+AVA L+ + S+L+ E +R
Sbjct: 230 FKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIM--SKLAGESESNLR 287
Query: 307 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 366
+A EA +AP+I+ D LD+I G + L+ +MD G K+
Sbjct: 288 KAFE----EAEKNAPAIIFIDELDAIAPKREKTHGEVERR----IVSQLLTLMD--GLKQ 337
Query: 367 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 426
++ + +A+ I +L GRFD V + P A+ R IL+ I ++++
Sbjct: 338 RAH-----VIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQ--IHTKNMKL 390
Query: 427 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL--VRD 479
+D++ L+ VA++ G+ DL L A+ + + D + + + +L D
Sbjct: 391 ADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMD 450
Query: 480 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 539
DF A+ + P A+R+ T E + W+D+GGL D++ ++E+++ P + P+ F +
Sbjct: 451 DFRWALSQSNPSALRE---TVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFG 507
Query: 540 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 599
+ VL YGPPGCGKT + A A C FIS+KGPELL + G SE VR+IF KA
Sbjct: 508 MTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKAR 567
Query: 600 AAAPCLLFFDEFDSIAPKR---GHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPD 656
AAPC+LFFDE DSIA R D G DRV+NQ LTE+DG+ VF+ AT+RPD
Sbjct: 568 QAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPD 627
Query: 657 LLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGADL 716
++D A+LRPGRLD+L++ P + R+ ILK RK P+A DVDLE +A MT GFSGADL
Sbjct: 628 IIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADL 687
Query: 717 QALLSDA 723
+ A
Sbjct: 688 TEICQRA 694
Score = 188 bits (477), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 100/230 (43%), Positives = 140/230 (60%)
Query: 507 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 566
G+DD+GG IKEM+ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 202 GYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE 261
Query: 567 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 626
F + GPE+++K G SE +R F +A AP ++F DE D+IAPKR + V
Sbjct: 262 TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE 321
Query: 627 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 686
R+V+Q LT +DG++ V V AAT+RP+ +D AL R GR DR + P RL+IL
Sbjct: 322 RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEIL 381
Query: 687 KVISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEILNNID 736
++ ++ + LADDVDLE +A+ T G GADL AL S+A L A+ + ++ ID
Sbjct: 382 QIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLID 431
>sp|P55072|TERA_HUMAN Transitional endoplasmic reticulum ATPase OS=Homo sapiens GN=VCP
PE=1 SV=4
Length = 806
Score = 282 bits (721), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 180/487 (36%), Positives = 266/487 (54%), Gaps = 32/487 (6%)
Query: 247 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 306
F + P IL++GPPG+GKT +A+AVA L+ + S+L+ E +R
Sbjct: 230 FKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIM--SKLAGESESNLR 287
Query: 307 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 366
+A EA +AP+I+ D LD+I G + L+ +MD G K+
Sbjct: 288 KAFE----EAEKNAPAIIFIDELDAIAPKREKTHGEVERR----IVSQLLTLMD--GLKQ 337
Query: 367 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 426
++ + +A+ I +L GRFD V + P A+ R IL+ I ++++
Sbjct: 338 RAH-----VIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQ--IHTKNMKL 390
Query: 427 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL--VRD 479
+D++ L+ VA++ G+ DL L A+ + + D + + + +L D
Sbjct: 391 ADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMD 450
Query: 480 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 539
DF A+ + P A+R+ T E + W+D+GGL D++ ++E+++ P + P+ F +
Sbjct: 451 DFRWALSQSNPSALRE---TVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFG 507
Query: 540 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 599
+ VL YGPPGCGKT + A A C FIS+KGPELL + G SE VR+IF KA
Sbjct: 508 MTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKAR 567
Query: 600 AAAPCLLFFDEFDSIAPKR---GHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPD 656
AAPC+LFFDE DSIA R D G DRV+NQ LTE+DG+ VF+ AT+RPD
Sbjct: 568 QAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPD 627
Query: 657 LLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGADL 716
++D A+LRPGRLD+L++ P + R+ ILK RK P+A DVDLE +A MT GFSGADL
Sbjct: 628 IIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADL 687
Query: 717 QALLSDA 723
+ A
Sbjct: 688 TEICQRA 694
Score = 188 bits (477), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 100/230 (43%), Positives = 140/230 (60%)
Query: 507 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 566
G+DD+GG IKEM+ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 202 GYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE 261
Query: 567 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 626
F + GPE+++K G SE +R F +A AP ++F DE D+IAPKR + V
Sbjct: 262 TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE 321
Query: 627 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 686
R+V+Q LT +DG++ V V AAT+RP+ +D AL R GR DR + P RL+IL
Sbjct: 322 RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEIL 381
Query: 687 KVISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEILNNID 736
++ ++ + LADDVDLE +A+ T G GADL AL S+A L A+ + ++ ID
Sbjct: 382 QIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLID 431
>sp|Q3ZBT1|TERA_BOVIN Transitional endoplasmic reticulum ATPase OS=Bos taurus GN=VCP PE=2
SV=1
Length = 806
Score = 282 bits (721), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 180/487 (36%), Positives = 266/487 (54%), Gaps = 32/487 (6%)
Query: 247 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 306
F + P IL++GPPG+GKT +A+AVA L+ + S+L+ E +R
Sbjct: 230 FKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIM--SKLAGESESNLR 287
Query: 307 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 366
+A EA +AP+I+ D LD+I G + L+ +MD G K+
Sbjct: 288 KAFE----EAEKNAPAIIFIDELDAIAPKREKTHGEVERR----IVSQLLTLMD--GLKQ 337
Query: 367 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 426
++ + +A+ I +L GRFD V + P A+ R IL+ I ++++
Sbjct: 338 RAH-----VIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQ--IHTKNMKL 390
Query: 427 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL--VRD 479
+D++ L+ VA++ G+ DL L A+ + + D + + + +L D
Sbjct: 391 ADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMD 450
Query: 480 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 539
DF A+ + P A+R+ T E + W+D+GGL D++ ++E+++ P + P+ F +
Sbjct: 451 DFRWALSQSNPSALRE---TVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFG 507
Query: 540 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 599
+ VL YGPPGCGKT + A A C FIS+KGPELL + G SE VR+IF KA
Sbjct: 508 MTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKAR 567
Query: 600 AAAPCLLFFDEFDSIAPKR---GHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPD 656
AAPC+LFFDE DSIA R D G DRV+NQ LTE+DG+ VF+ AT+RPD
Sbjct: 568 QAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPD 627
Query: 657 LLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGADL 716
++D A+LRPGRLD+L++ P + R+ ILK RK P+A DVDLE +A MT GFSGADL
Sbjct: 628 IIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADL 687
Query: 717 QALLSDA 723
+ A
Sbjct: 688 TEICQRA 694
Score = 188 bits (477), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 100/230 (43%), Positives = 140/230 (60%)
Query: 507 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 566
G+DD+GG IKEM+ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 202 GYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE 261
Query: 567 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 626
F + GPE+++K G SE +R F +A AP ++F DE D+IAPKR + V
Sbjct: 262 TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE 321
Query: 627 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 686
R+V+Q LT +DG++ V V AAT+RP+ +D AL R GR DR + P RL+IL
Sbjct: 322 RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEIL 381
Query: 687 KVISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEILNNID 736
++ ++ + LADDVDLE +A+ T G GADL AL S+A L A+ + ++ ID
Sbjct: 382 QIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLID 431
>sp|Q7ZU99|TERA_DANRE Transitional endoplasmic reticulum ATPase OS=Danio rerio GN=vcp
PE=1 SV=1
Length = 806
Score = 281 bits (719), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 194/560 (34%), Positives = 289/560 (51%), Gaps = 47/560 (8%)
Query: 247 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 306
F + P IL++GPPG+GKT +A+AVA L+ + S+L+ E +R
Sbjct: 230 FKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIM--SKLAGESESNLR 287
Query: 307 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 366
+A EA +AP+I+ D LD+I G + L+ +MD G K+
Sbjct: 288 KAFE----EAEKNAPAIIFIDELDAIAPKREKTHGEVERR----IVSQLLTLMD--GLKQ 337
Query: 367 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 426
++ + +A+ I +L GRFD V + P A+ R IL+ I ++++
Sbjct: 338 RAH-----VIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQ--IHTKNMKL 390
Query: 427 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL--VRD 479
+D++ L+ VA++ G+ DL L A+ + + D + + + +L D
Sbjct: 391 ADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMD 450
Query: 480 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 539
DF A+ + P A+R+ T E W+D+GGL D++ ++E+++ P + P+ F +
Sbjct: 451 DFRWALSQSNPSALRE---TVVEVPNITWEDIGGLDDVKRELQELVQYPVEHPDKFLKFG 507
Query: 540 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 599
+ VL YGPPGCGKT + A A C FIS+KGPELL + G SE VR+IF KA
Sbjct: 508 MTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKAR 567
Query: 600 AAAPCLLFFDEFDSIAPKR---GHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPD 656
AAPC+LFFDE DSIA R D G DRV+NQ LTE+DG+ VF+ AT+RPD
Sbjct: 568 QAAPCVLFFDELDSIAKARGGNVGDGGGAADRVINQILTEMDGMSSKKNVFIIGATNRPD 627
Query: 657 LLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGADL 716
++D A+LRPGRLD+L++ P + R+ ILK RK P++ DVDL+ +A MT GFSGADL
Sbjct: 628 IIDPAILRPGRLDQLIYIPLPDEKSRIAILKANLRKSPISKDVDLDFLAKMTNGFSGADL 687
Query: 717 QALLSDAQLSAVHE------ILNNIDSNEPGKMPVITDALLKSIASK--------ARPSV 762
+ A A+ E P M V D + I AR SV
Sbjct: 688 TEICQRACKLAIRESIENEIRRERERQTNPSAMEVEEDDPVPEIRKDHFEEAMRFARRSV 747
Query: 763 SEAEKLRLYSIYGQFLDSKK 782
S+ + +R Y ++ Q L +
Sbjct: 748 SDND-IRKYEMFAQTLQQSR 766
Score = 189 bits (479), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 100/230 (43%), Positives = 141/230 (61%)
Query: 507 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 566
G+DD+GG+ IKEM+ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 202 GYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE 261
Query: 567 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 626
F + GPE+++K G SE +R F +A AP ++F DE D+IAPKR + V
Sbjct: 262 TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE 321
Query: 627 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 686
R+V+Q LT +DG++ V V AAT+RP+ +D AL R GR DR + P RL+IL
Sbjct: 322 RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEIL 381
Query: 687 KVISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEILNNID 736
++ ++ + LADDVDLE +A+ T G GADL AL S+A L A+ + ++ ID
Sbjct: 382 QIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLID 431
>sp|Q54CS8|PEX6_DICDI Peroxisomal biogenesis factor 6 OS=Dictyostelium discoideum GN=pex6
PE=3 SV=1
Length = 1201
Score = 280 bits (717), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 180/550 (32%), Positives = 300/550 (54%), Gaps = 42/550 (7%)
Query: 258 ILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISEAL 317
+L++GP G GK +L VAK + H+ V C +L + N + +A
Sbjct: 670 LLLNGPQGVGKRTLLNRVAKQMG------IHVYEVDCYKLYDFVESKKDWNIRNVLEQAS 723
Query: 318 DHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGIG--PI 375
+ P+++I N + + ++ + + ++ L++ L++I+ + + S+ P+
Sbjct: 724 NSTPTLLILKNFEVLEQTAQSMQQEKKESN---LSQTLINILKDINDSNTSNINSNKYPL 780
Query: 376 AFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEI-LLDV 434
+ S++++ + F + L +P ++R IL++ + ++ + + + ++
Sbjct: 781 IITVTVNSMDELSNKV--RNWFKHEITLNSPDENQRFKILKYLTKNLPIDIGNTVSIKNL 838
Query: 435 ASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPT--------LVRDDFSQAMH 486
+ + + +L L+ R+ A+ R L IKP ++ DD +++
Sbjct: 839 SIRTASFLNSNLRALIQRSSINALKRVLSIQQMMNDEIKPIEIYNCGFLVMGDDIQKSLS 898
Query: 487 EFLPVAMRDITKTSAEGGR---SGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLR 543
E M++ +S + WDDVGGL ++++ I + I+LP + P++FA + R
Sbjct: 899 E-----MQEYQSSSIGAPKIPNVSWDDVGGLANVKSEIMDTIQLPLEHPHLFASG-IGKR 952
Query: 544 SNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAP 603
S +LL+GPPG GKT + A A CSL F+SVKGPEL+N YIG SE+ +R+IF+KA A P
Sbjct: 953 SGILLFGPPGTGKTLLAKAIATECSLNFLSVKGPELINMYIGESEKNIREIFNKARQAKP 1012
Query: 604 CLLFFDEFDSIAPKRGH--DNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAA 661
C++FFDE DS+AP RG+ D+ GV DRVV+Q L ELDG++ + VF+ AT+RPDLLD++
Sbjct: 1013 CVIFFDELDSLAPSRGNGADSGGVMDRVVSQLLAELDGMQKSSDVFIIGATNRPDLLDSS 1072
Query: 662 LLRPGRLDRLLFCDFPSPRE-RLDILKVISRKLPLADDVDL-EAIAHMTEGFSGADLQAL 719
L+RPGRLDRLL+ S +E + IL+ ++RK LADDVDL + + + +GAD AL
Sbjct: 1073 LMRPGRLDRLLYLGISSEKENQFKILQALTRKFNLADDVDLRKVVENCPMNLTGADFYAL 1132
Query: 720 LSDAQLSAVHE-----ILNNIDSNEPG-KMPVITDALLKSIASKARPSVSEAEKLRLYSI 773
SDA +A HE I I+ E K+ V + +K++ S PSVS E + +
Sbjct: 1133 ASDAMSNAFHERITASINGEINEEEQNQKLIVYQNHFIKAVNSLV-PSVSLDELEYYHKV 1191
Query: 774 YGQFLDSKKS 783
QF + KS
Sbjct: 1192 QKQFSGNNKS 1201
>sp|P03974|TERA_PIG Transitional endoplasmic reticulum ATPase OS=Sus scrofa GN=VCP PE=1
SV=5
Length = 806
Score = 280 bits (717), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 179/487 (36%), Positives = 266/487 (54%), Gaps = 32/487 (6%)
Query: 247 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 306
F + P IL++GPPG+GKT +A+AVA L+ + S+L+ E +R
Sbjct: 230 FKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIM--SKLAGESESNLR 287
Query: 307 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 366
+A EA +AP+I+ D LD+I G + L+ +MD G K+
Sbjct: 288 KAFE----EAEKNAPAIIFIDELDAIAPKREKTHGEVERR----IVSQLLTLMD--GLKQ 337
Query: 367 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 426
++ + +A+ I +L GRFD V + P A+ R IL+ I ++++
Sbjct: 338 RAH-----VIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQ--IHTKNMKL 390
Query: 427 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL--VRD 479
+D++ L+ VA++ G+ DL L A+ + + D + + + +L D
Sbjct: 391 ADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMD 450
Query: 480 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 539
DF A+ + P A+R+ T E + W+D+GGL D++ ++++++ P + P+ F +
Sbjct: 451 DFRWALSQSNPSALRE---TVVEVPQVTWEDIGGLEDVKRELQDLVQYPVEHPDKFLKFG 507
Query: 540 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 599
+ VL YGPPGCGKT + A A C FIS+KGPELL + G SE VR+IF KA
Sbjct: 508 MTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKAR 567
Query: 600 AAAPCLLFFDEFDSIAPKR---GHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPD 656
AAPC+LFFDE DSIA R D G DRV+NQ LTE+DG+ VF+ AT+RPD
Sbjct: 568 QAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPD 627
Query: 657 LLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGADL 716
++D A+LRPGRLD+L++ P + R+ ILK RK P+A DVDLE +A MT GFSGADL
Sbjct: 628 IIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADL 687
Query: 717 QALLSDA 723
+ A
Sbjct: 688 TEICQRA 694
Score = 188 bits (477), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 100/230 (43%), Positives = 140/230 (60%)
Query: 507 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 566
G+DD+GG IKEM+ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 202 GYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANE 261
Query: 567 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 626
F + GPE+++K G SE +R F +A AP ++F DE D+IAPKR + V
Sbjct: 262 TGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVE 321
Query: 627 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 686
R+V+Q LT +DG++ V V AAT+RP+ +D AL R GR DR + P RL+IL
Sbjct: 322 RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEIL 381
Query: 687 KVISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEILNNID 736
++ ++ + LADDVDLE +A+ T G GADL AL S+A L A+ + ++ ID
Sbjct: 382 QIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLID 431
>sp|Q9LZF6|CD48E_ARATH Cell division control protein 48 homolog E OS=Arabidopsis thaliana
GN=CDC48E PE=1 SV=2
Length = 810
Score = 280 bits (715), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 194/574 (33%), Positives = 284/574 (49%), Gaps = 60/574 (10%)
Query: 247 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCC------SRLSLE 300
F + + P IL++GPPGSGKT +A+AVA F C S+L+ E
Sbjct: 233 FKSIGVKPPKGILLYGPPGSGKTLIARAVANE--------TGAFFFCINGPEIMSKLAGE 284
Query: 301 KGPIIRQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMD 360
+R+A EA +APSI+ D +DSI G + L+ +MD
Sbjct: 285 SESNLRKAFE----EAEKNAPSIIFIDEIDSIAPKREKTNGEVERR----IVSQLLTLMD 336
Query: 361 EYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQ 420
G K ++ + + + I +L GRFD + + P R +L I
Sbjct: 337 --GLKSRAH-----VIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLR--IH 387
Query: 421 RRSLECSDEILLDVASK-CDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPT 475
++++ ++++ L+ SK GY DL L + + D S + I +
Sbjct: 388 TKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDDSIDAEILNS 447
Query: 476 LV--RDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPN 533
+ + F A+ P A+R+ T E W+D+GGL +++ ++E ++ P + P
Sbjct: 448 MAVSNEHFHTALGNSNPSALRE---TVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPE 504
Query: 534 IFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRD 593
F + + VL YGPPGCGKT + A A C FISVKGPELL + G SE VR+
Sbjct: 505 KFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRE 564
Query: 594 IFSKATAAAPCLLFFDEFDSIAPKRGH---DNTGVTDRVVNQFLTELDGVEVLTGVFVFA 650
IF KA +APC+LFFDE DSIA +RG+ D G DRV+NQ LTE+DG+ VF+
Sbjct: 565 IFDKARQSAPCVLFFDELDSIATQRGNSAGDAGGAADRVLNQLLTEMDGMNAKKTVFIIG 624
Query: 651 ATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEG 710
AT+RPD++D+ALLRPGRLD+L++ P RL+I K RK P+A DVD+ A+A T+G
Sbjct: 625 ATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKACLRKSPVAKDVDVTALAKYTQG 684
Query: 711 FSGADLQALLSDAQLSAVHEILNNIDSNE------PGKMP---------VITDALLKSIA 755
FSGAD+ + A A+ E + NE P M I A +
Sbjct: 685 FSGADITEICQRACKYAIRENIEKDIENERRRSQNPEAMEEDMVDDEVSEIRAAHFEESM 744
Query: 756 SKARPSVSEAEKLRLYSIYGQFLDSKKSVAAQSR 789
AR SVS+A+ +R Y + Q L + ++ R
Sbjct: 745 KYARRSVSDAD-IRKYQAFAQTLQQSRGFGSEFR 777
Score = 189 bits (481), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 97/230 (42%), Positives = 139/230 (60%)
Query: 507 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 566
G+DDVGG+ I+E++ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 205 GYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANE 264
Query: 567 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 626
F + GPE+++K G SE +R F +A AP ++F DE DSIAPKR N V
Sbjct: 265 TGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVE 324
Query: 627 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 686
R+V+Q LT +DG++ V V AT+RP+ +D AL R GR DR + P RL++L
Sbjct: 325 RRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVL 384
Query: 687 KVISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEILNNID 736
++ ++ + LA+DVDLE I+ T G+ GADL AL ++A L + E ++ ID
Sbjct: 385 RIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVID 434
>sp|Q96372|CDC48_CAPAN Cell division cycle protein 48 homolog OS=Capsicum annuum GN=CAFP
PE=2 SV=1
Length = 805
Score = 276 bits (707), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 192/572 (33%), Positives = 282/572 (49%), Gaps = 58/572 (10%)
Query: 247 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCC------SRLSLE 300
F + + P IL++GPPGSGKT +A+AVA F C S+L+ E
Sbjct: 234 FKSIGVKPPKGILLYGPPGSGKTLIARAVANE--------TGAFFFCINGPEIMSKLAGE 285
Query: 301 KGPIIRQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMD 360
+R+A EA +APSI+ D +DSI G + L+ +MD
Sbjct: 286 SESNLRKAFE----EAEKNAPSIIFIDEIDSIAPKREKTHGEVERR----IVSQLLTLMD 337
Query: 361 EYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQ 420
G K ++ + + + I +L GRFD + + P R +L I
Sbjct: 338 --GLKSRAH-----VIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLG--IH 388
Query: 421 RRSLECSDEILLDVASK-CDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPT 475
++++ ++E+ L+ SK GY DL L + + D + + + +
Sbjct: 389 TKNMKLAEEVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVLDLEDDTIDAEVLNS 448
Query: 476 L--VRDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPN 533
+ + F A+ P A+R+ T E W+D+GGL +++ ++E ++ P + P
Sbjct: 449 MAVTNEHFQTALGTSNPSALRE---TVVEVPNVSWEDIGGLENVKRELQETVQYPVEPPE 505
Query: 534 IFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRD 593
F + + VL YGPPGCGKT + A A C FISVKGPELL + G SE VR+
Sbjct: 506 KFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRE 565
Query: 594 IFSKATAAAPCLLFFDEFDSIAPKRGH---DNTGVTDRVVNQFLTELDGVEVLTGVFVFA 650
IF KA +APC+LFFDE DSIA +RG D G DRV+NQ LTE+DG+ VF+
Sbjct: 566 IFDKARQSAPCVLFFDELDSIATQRGSSSGDAGGAADRVLNQLLTEMDGMNAKKTVFIIG 625
Query: 651 ATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEG 710
AT+RPD++D ALLRPGRLD+L++ P R I K RK PL+ D+DL A+A T+G
Sbjct: 626 ATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPLSKDIDLRALAKHTQG 685
Query: 711 FSGADLQALLSDAQLSAVHEIL-----------NNIDS--NEPGKMPVITDALLKSIASK 757
FSGAD+ + A A+ E + N DS + ++P I A +
Sbjct: 686 FSGADVTEICQRACKYAIRENIEKDIEREKRRQENPDSMDEDVDEVPEIKPAHFEESMKY 745
Query: 758 ARPSVSEAEKLRLYSIYGQFLDSKKSVAAQSR 789
AR SVS+A+ +R Y + Q L + + R
Sbjct: 746 ARRSVSDAD-IRKYQAFAQTLQQSRGFGTEFR 776
Score = 182 bits (463), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 94/230 (40%), Positives = 138/230 (60%)
Query: 507 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 566
G+DDVGG+ I+E++ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 206 GYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANE 265
Query: 567 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 626
F + GPE+++K G SE +R F +A AP ++F DE DSIAPKR + V
Sbjct: 266 TGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVE 325
Query: 627 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 686
R+V+Q LT +DG++ V V AT+RP+ +D AL R GR DR + P RL++L
Sbjct: 326 RRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVL 385
Query: 687 KVISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEILNNID 736
+ ++ + LA++VDLE I+ T G+ GADL AL ++A L + E ++ +D
Sbjct: 386 GIHTKNMKLAEEVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVLD 435
>sp|P54774|CDC48_SOYBN Cell division cycle protein 48 homolog OS=Glycine max GN=CDC48 PE=2
SV=1
Length = 807
Score = 275 bits (703), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 191/574 (33%), Positives = 281/574 (48%), Gaps = 60/574 (10%)
Query: 247 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCC------SRLSLE 300
F + + P IL++GPPGSGKT +A+AVA F C S+L+ E
Sbjct: 234 FKSIGVKPPKGILLYGPPGSGKTLIARAVANE--------TGAFFFCINGPEIMSKLAGE 285
Query: 301 KGPIIRQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMD 360
+R+A EA +APSI+ D +DSI G V L + +MD
Sbjct: 286 SESNLRKAFE----EAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQL----LTLMD 337
Query: 361 EYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQ 420
G K ++ + + + I +L GRFD + + P R +L I
Sbjct: 338 --GLKSRAH-----VIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLR--IH 388
Query: 421 RRSLECSDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPT 475
++++ SD++ L+ +A GY DL L + + D + + + +
Sbjct: 389 TKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEVLNS 448
Query: 476 L--VRDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPN 533
+ + F A+ P A+R+ T E W+D+GGL +++ ++E ++ P + P
Sbjct: 449 MAVTNEHFQTALGTSNPSALRE---TVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPE 505
Query: 534 IFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRD 593
F + + VL YGPPGCGKT + A A C FISVKGPELL + G SE VR+
Sbjct: 506 KFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRE 565
Query: 594 IFSKATAAAPCLLFFDEFDSIAPKRGH---DNTGVTDRVVNQFLTELDGVEVLTGVFVFA 650
IF KA +APC+LFFDE DSIA +RG D G DRV+NQ LTE+DG+ VF+
Sbjct: 566 IFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMSAKKTVFIIG 625
Query: 651 ATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEG 710
AT+RPD++D ALLRPGRLD+L++ P R I K RK P+A +VDL A+A T+G
Sbjct: 626 ATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPIAKNVDLRALARHTQG 685
Query: 711 FSGADLQALLSDAQLSAVHE-ILNNIDSNEPGK--------------MPVITDALLKSIA 755
FSGAD+ + A A+ E I +I+ + + I A +
Sbjct: 686 FSGADITEICQRACKYAIRENIEKDIERERKSRENPEAMDEDTVDDEVAEIKAAHFEESM 745
Query: 756 SKARPSVSEAEKLRLYSIYGQFLDSKKSVAAQSR 789
AR SVS+A+ +R Y + Q L + ++ R
Sbjct: 746 KFARRSVSDAD-IRKYQAFAQTLQQSRGFGSEFR 778
Score = 189 bits (479), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 97/230 (42%), Positives = 139/230 (60%)
Query: 507 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 566
G+DDVGG+ I+E++ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 206 GYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANE 265
Query: 567 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 626
F + GPE+++K G SE +R F +A AP ++F DE DSIAPKR + V
Sbjct: 266 TGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVE 325
Query: 627 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 686
R+V+Q LT +DG++ V V AT+RP+ +D AL R GR DR + P RL++L
Sbjct: 326 RRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVL 385
Query: 687 KVISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEILNNID 736
++ ++ + L+DDVDLE IA T G+ GADL AL ++A L + E ++ ID
Sbjct: 386 RIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAALQCIREKMDVID 435
>sp|Q9SCN8|CD48D_ARATH Cell division control protein 48 homolog D OS=Arabidopsis thaliana
GN=CDC48D PE=1 SV=1
Length = 815
Score = 274 bits (700), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 178/508 (35%), Positives = 258/508 (50%), Gaps = 47/508 (9%)
Query: 247 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCC------SRLSLE 300
F + + P IL++GPPGSGKT +A+AVA F C S+L+ E
Sbjct: 234 FKSIGVKPPKGILLYGPPGSGKTLIARAVANE--------TGAFFFCINGPEIMSKLAGE 285
Query: 301 KGPIIRQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMD 360
+R+A EA +APSI+ D +DSI G + L+ +MD
Sbjct: 286 SESNLRKAFE----EAEKNAPSIIFIDEIDSIAPKREKTHGEVERR----IVSQLLTLMD 337
Query: 361 EYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQ 420
G K ++ + + + I +L GRFD + + P R +L I
Sbjct: 338 --GLKSRAH-----VIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLR--IH 388
Query: 421 RRSLECSDEILLDVASK-CDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPT 475
++++ ++++ L+ SK GY DL L + + D + I +
Sbjct: 389 TKNMKLAEDVDLERVSKDTHGYVGADLAALCTEAALQCIREKMDVIDLDDEEIDAEILNS 448
Query: 476 LV--RDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPN 533
+ D F A+ P A+R+ T E W+D+GGL +++ ++E ++ P + P
Sbjct: 449 MAVSNDHFQTALGNSNPSALRE---TVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPE 505
Query: 534 IFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRD 593
F + + VL YGPPGCGKT + A A C FIS+KGPELL + G SE VR+
Sbjct: 506 KFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRE 565
Query: 594 IFSKATAAAPCLLFFDEFDSIAPKRGH---DNTGVTDRVVNQFLTELDGVEVLTGVFVFA 650
IF KA +APC+LFFDE DSIA +RG+ D G DRV+NQ LTE+DG+ VF+
Sbjct: 566 IFDKARQSAPCVLFFDELDSIATQRGNSVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIG 625
Query: 651 ATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEG 710
AT+RPD++D ALLRPGRLD+L++ P R I K RK P+A DVDL A+A T+G
Sbjct: 626 ATNRPDIIDPALLRPGRLDQLIYIPLPDEESRYQIFKSCLRKSPVAKDVDLRALAKYTQG 685
Query: 711 FSGADLQALLSDAQLSAVHEILNNIDSN 738
FSGAD+ + Q S + I NI+ +
Sbjct: 686 FSGADITEI---CQRSCKYAIRENIEKD 710
Score = 186 bits (472), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 95/230 (41%), Positives = 139/230 (60%)
Query: 507 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 566
G+DDVGG+ I+E++ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 206 GYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANE 265
Query: 567 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 626
F + GPE+++K G SE +R F +A AP ++F DE DSIAPKR + V
Sbjct: 266 TGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVE 325
Query: 627 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 686
R+V+Q LT +DG++ V V AT+RP+ +D AL R GR DR + P RL++L
Sbjct: 326 RRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVL 385
Query: 687 KVISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEILNNID 736
++ ++ + LA+DVDLE ++ T G+ GADL AL ++A L + E ++ ID
Sbjct: 386 RIHTKNMKLAEDVDLERVSKDTHGYVGADLAALCTEAALQCIREKMDVID 435
>sp|O60058|AFG2_SCHPO ATPase family gene 2 protein OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=afg2 PE=3 SV=1
Length = 809
Score = 273 bits (699), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 183/535 (34%), Positives = 270/535 (50%), Gaps = 44/535 (8%)
Query: 211 TQGFDSNVSSLSWM---GTTASDVINRIKVLLSPDSGLWFSTYHLPLPGHILIHGPPGSG 267
TQ FD S++++ G A R V L + F +++ P +L++GPPG+G
Sbjct: 266 TQNFDGPPSAVTFSSIGGLQAQIAQIRDIVELPFQNPELFKFFNIMPPRGVLLYGPPGTG 325
Query: 268 KTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII--------RQALSNFISEALDH 319
KT + +AVA VF GP + L +A H
Sbjct: 326 KTMVMRAVAAEANAQ-------VFTI-------DGPSVVGKYLGETESRLRKIFEDARAH 371
Query: 320 APSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGIGPIAFVA 379
PSI+ D +D++ ++ + S+ + +A L+D M G + +A
Sbjct: 372 QPSIIFIDEIDALAPKRTE-DVSEAESRAVATLLTLLDGM----------ANAGKVVVIA 420
Query: 380 SAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLDVASKCD 439
+ I ++L GR + +++ P S R I++ + E +D L D+AS+
Sbjct: 421 ATNRPNSIDEALRRPGRLEKEIEIGIPDKSARLDIIKLLLSGVPNEINDAQLEDLASRTH 480
Query: 440 GYDAYDLEILVDRTVHAAVGRY--LHSDSSFEKHIKPTLVRDDFSQAMHEFLPVAMRDIT 497
Y DL +V A+ R L D+S I + DD A+ AMR+
Sbjct: 481 AYVGADLAAVVREAALRAIKRTISLQKDTS-GLDIFGAVQMDDLEFALSSVRQSAMREFM 539
Query: 498 KTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKT 557
E W D+GG +++ +KE +E P F++ +R VLLYGPPGC KT
Sbjct: 540 ---MESPNVHWSDIGGQEEVKQKLKESVEWPLTHGETFSRLGVRPPKGVLLYGPPGCSKT 596
Query: 558 HIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPK 617
A A L FI+VKGPEL +K++G SE+AVR +F KA A+P ++FFDE D++
Sbjct: 597 ITAKAIATETGLNFIAVKGPELFDKFVGESERAVRQVFQKARQASPSVIFFDEIDALTAN 656
Query: 618 RGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFP 677
RG DN+ +DRVV L ELDG+E L V V AAT+RPD++D AL+RPGRLDRLL+ P
Sbjct: 657 RGEDNS--SDRVVAALLNELDGIEALRNVLVLAATNRPDMIDPALMRPGRLDRLLYVGPP 714
Query: 678 SPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEIL 732
+ R I+K+ + K+ A+DVDL+ IA TEG SGA++ AL +A L A+HE L
Sbjct: 715 NFEARKQIVKIQAEKMKFAEDVDLDLIAEKTEGCSGAEVVALCQEAGLIAMHEDL 769
Score = 162 bits (409), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 86/227 (37%), Positives = 131/227 (57%), Gaps = 1/227 (0%)
Query: 508 WDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAC 567
+ +GGL I++++ELP + P +F + VLLYGPPG GKT ++ A AA
Sbjct: 278 FSSIGGLQAQIAQIRDIVELPFQNPELFKFFNIMPPRGVLLYGPPGTGKTMVMRAVAAEA 337
Query: 568 SLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD 627
+ + ++ GP ++ KY+G +E +R IF A A P ++F DE D++APKR D +
Sbjct: 338 NAQVFTIDGPSVVGKYLGETESRLRKIFEDARAHQPSIIFIDEIDALAPKRTEDVSEAES 397
Query: 628 RVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILK 687
R V LT LDG+ V V AAT+RP+ +D AL RPGRL++ + P RLDI+K
Sbjct: 398 RAVATLLTLLDGMANAGKVVVIAATNRPNSIDEALRRPGRLEKEIEIGIPDKSARLDIIK 457
Query: 688 VISRKLP-LADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEILN 733
++ +P +D LE +A T + GADL A++ +A L A+ ++
Sbjct: 458 LLLSGVPNEINDAQLEDLASRTHAYVGADLAAVVREAALRAIKRTIS 504
>sp|Q5AWS6|CDC48_EMENI Cell division control protein 48 OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=cdc48 PE=1 SV=2
Length = 823
Score = 273 bits (699), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 193/560 (34%), Positives = 284/560 (50%), Gaps = 50/560 (8%)
Query: 247 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 306
F + + P IL++GPPG+GKT +A+AVA L+ + S+++ E +R
Sbjct: 251 FKSIGIKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIM--SKMAGESESNLR 308
Query: 307 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 366
+A EA ++P+I+ D +DSI G V L + +MD G K
Sbjct: 309 KAFE----EAEKNSPAIIFIDEIDSIAPKREKTNGEVERRVVSQL----LTLMD--GMKA 358
Query: 367 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 426
+S+ + +A+ I +L GRFD V + P + R IL I ++++
Sbjct: 359 RSN-----VVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTGRLEILS--IHTKNMKL 411
Query: 427 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL--VRD 479
+++ L+ +A++ GY DL L + + + + + + +L +
Sbjct: 412 GEDVDLETIAAETHGYVGSDLASLCSEAAMQQIREKMDLIDLDEDTIDAEVLDSLGVTME 471
Query: 480 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 539
+F A+ P A+R++ R W+D+GGL +++ + E ++ P P F +
Sbjct: 472 NFRYALGVSNPSALREVAVVEVPNVR--WEDIGGLEEVKRELIESVQYPVDHPEKFQKFG 529
Query: 540 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 599
L VL YGPPG GKT + A A C+ FISVKGPELL+ + G SE +RDIF KA
Sbjct: 530 LSPSRGVLFYGPPGTGKTMLAKAVANECAANFISVKGPELLSMWFGESESNIRDIFDKAR 589
Query: 600 AAAPCLLFFDEFDSIAPKRG---HDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPD 656
AAAPC++F DE DSIA RG D G +DRVVNQ LTE+DG+ VFV AT+RP+
Sbjct: 590 AAAPCVVFLDELDSIAKSRGGSVGDAGGASDRVVNQLLTEMDGMTSKKNVFVIGATNRPE 649
Query: 657 LLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGADL 716
LDAAL+RPGRLD L++ P R ILK RK P+A DVD+E IA T GFSGADL
Sbjct: 650 QLDAALVRPGRLDTLVYVPLPDQASREGILKAQLRKTPVASDVDIEFIASKTHGFSGADL 709
Query: 717 QALLSDAQLSAVHEILN----------------NIDSNEPGKMPV--ITDALLKSIASKA 758
+ A A+ E ++ ++ E G+ PV +T A + A
Sbjct: 710 GFVTQRAVKLAIKESISAEIERQKQREAAGEDVKMEDEEEGEDPVPELTRAHFEEAMKTA 769
Query: 759 RPSVSEAEKLRLYSIYGQFL 778
R SVS+ E +R Y + Q L
Sbjct: 770 RRSVSDVE-IRRYEAFAQSL 788
Score = 191 bits (485), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 96/233 (41%), Positives = 141/233 (60%)
Query: 507 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 566
G+DD+GG I+E++ELP + P +F ++ +L+YGPPG GKT + A A
Sbjct: 223 GYDDIGGCRKQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVANE 282
Query: 567 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 626
F + GPE+++K G SE +R F +A +P ++F DE DSIAPKR N V
Sbjct: 283 TGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKTNGEVE 342
Query: 627 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 686
RVV+Q LT +DG++ + V V AAT+RP+ +D AL R GR DR + P P RL+IL
Sbjct: 343 RRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTGRLEIL 402
Query: 687 KVISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEILNNIDSNE 739
+ ++ + L +DVDLE IA T G+ G+DL +L S+A + + E ++ ID +E
Sbjct: 403 SIHTKNMKLGEDVDLETIAAETHGYVGSDLASLCSEAAMQQIREKMDLIDLDE 455
>sp|P54812|TERA2_CAEEL Transitional endoplasmic reticulum ATPase homolog 2
OS=Caenorhabditis elegans GN=cdc-48.2 PE=1 SV=2
Length = 810
Score = 273 bits (698), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 186/564 (32%), Positives = 283/564 (50%), Gaps = 51/564 (9%)
Query: 247 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 306
F + P IL+ GPPG+GKT +A+AVA L+ + S++S E +R
Sbjct: 235 FKAIGVKPPRGILLFGPPGTGKTLIARAVANETGAFFFLINGPEIM--SKMSGESESNLR 292
Query: 307 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 366
+A + E ++P+I+ D +D+I G V L + +MD G K
Sbjct: 293 KAFA----ECEKNSPAILFIDEIDAIAPKREKAHGEVEKRIVSQL----LTLMD--GLKT 342
Query: 367 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 426
++ + +A+ I +L GRFD + + P A R IL I ++++
Sbjct: 343 RAH-----VVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILR--IHTKNMKL 395
Query: 427 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL--VRD 479
+++ L+ VA++C G+ DL L + + D + + + +L +
Sbjct: 396 GEDVDLEQVANECHGFVGADLASLCSEAAIQQIREKMELIDLEDDTIDAEVLNSLAVTME 455
Query: 480 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 539
+F AM + P A+R+ E + W D+GGL +++ ++E+++ P + P + +
Sbjct: 456 NFRFAMGKSSPSALREAV---VETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFG 512
Query: 540 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 599
++ VL YGPPGCGKT + A A C FIS+KGPELL + G SE VRD+F KA
Sbjct: 513 MQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKAR 572
Query: 600 AAAPCLLFFDEFDSIAPKRG---HDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPD 656
AAAPC+LFFDE DSIA RG D G DRV+NQ LTE+DG+ VF+ AT+RPD
Sbjct: 573 AAAPCVLFFDELDSIAKARGGSVGDAGGAADRVINQVLTEMDGMNAKKNVFIIGATNRPD 632
Query: 657 LLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGADL 716
++D A+LRPGRLD+L++ P RL I K RK PL+ D+DL +A T GFSGADL
Sbjct: 633 IIDPAVLRPGRLDQLIYIPLPDEASRLQIFKASLRKTPLSADLDLNFLAKNTVGFSGADL 692
Query: 717 QALLSDAQLSAVHEILNNIDSNEPGK------------------MPVITDALLKSIASKA 758
+ A A+ E + E + +P IT A + A
Sbjct: 693 TEICQRACKLAIRESIEREIRQEKERQDRSARGEELMEDELADPVPEITRAHFEEAMKFA 752
Query: 759 RPSVSEAEKLRLYSIYGQFLDSKK 782
R SV++ + +R Y ++ Q L +
Sbjct: 753 RRSVTDND-IRKYEMFAQTLQQSR 775
Score = 181 bits (460), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 94/230 (40%), Positives = 138/230 (60%)
Query: 507 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 566
G+DD+GG+ IKEM+ELP + P +F ++ +LL+GPPG GKT I A A
Sbjct: 207 GYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIARAVANE 266
Query: 567 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 626
F + GPE+++K G SE +R F++ +P +LF DE D+IAPKR + V
Sbjct: 267 TGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEIDAIAPKREKAHGEVE 326
Query: 627 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 686
R+V+Q LT +DG++ V V AAT+RP+ +D AL R GR DR + P RL+IL
Sbjct: 327 KRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEIL 386
Query: 687 KVISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEILNNID 736
++ ++ + L +DVDLE +A+ GF GADL +L S+A + + E + ID
Sbjct: 387 RIHTKNMKLGEDVDLEQVANECHGFVGADLASLCSEAAIQQIREKMELID 436
>sp|P25694|CDC48_YEAST Cell division control protein 48 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CDC48 PE=1 SV=3
Length = 835
Score = 272 bits (696), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 195/577 (33%), Positives = 284/577 (49%), Gaps = 69/577 (11%)
Query: 247 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFV-----CCSRLSLEK 301
F + P +L++GPPG+GKT +A+AVA F+ S+++ E
Sbjct: 240 FKAIGIKPPRGVLMYGPPGTGKTLMARAVANE-------TGAFFFLINGPEVMSKMAGES 292
Query: 302 GPIIRQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDE 361
+R+A EA +AP+I+ D +DSI + D + V++ L+ +MD
Sbjct: 293 ESNLRKAFE----EAEKNAPAIIFIDEIDSI-APKRDKTNGEVERRVVSQ---LLTLMD- 343
Query: 362 YGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQR 421
G K +S+ + +A+ I +L GRFD V + P A+ R +L I
Sbjct: 344 -GMKARSN-----VVVIAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEVLR--IHT 395
Query: 422 RSLECSDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLV--- 477
++++ +D++ L+ +A++ GY D+ L + + E I ++
Sbjct: 396 KNMKLADDVDLEALAAETHGYVGADIASLCSEAAMQQIREKMDLIDLDEDEIDAEVLDSL 455
Query: 478 ---RDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNI 534
D+F A+ P A+R+ T E WDDVGGL +I+ +KE +E P P+
Sbjct: 456 GVTMDNFRFALGNSNPSALRE---TVVESVNVTWDDVGGLDEIKEELKETVEYPVLHPDQ 512
Query: 535 FAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDI 594
+ + L VL YGPPG GKT + A A S FISVKGPELL+ + G SE +RDI
Sbjct: 513 YTKFGLSPSKGVLFYGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDI 572
Query: 595 FSKATAAAPCLLFFDEFDSIAPKRG---HDNTGVTDRVVNQFLTELDGVEVLTGVFVFAA 651
F KA AAAP ++F DE DSIA RG D G +DRVVNQ LTE+DG+ VFV A
Sbjct: 573 FDKARAAAPTVVFLDELDSIAKARGGSLGDAGGASDRVVNQLLTEMDGMNAKKNVFVIGA 632
Query: 652 TSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGF 711
T+RPD +D A+LRPGRLD+L++ P RL IL RK PL ++L AIA T+GF
Sbjct: 633 TNRPDQIDPAILRPGRLDQLIYVPLPDENARLSILNAQLRKTPLEPGLELTAIAKATQGF 692
Query: 712 SGADLQALLSDAQLSAVHEILNNIDSNEPGK--------------------------MPV 745
SGADL ++ A A+ + + +E K +P
Sbjct: 693 SGADLLYIVQRAAKYAIKDSIEAHRQHEAEKEVKVEGEDVEMTDEGAKAEQEPEVDPVPY 752
Query: 746 ITDALLKSIASKARPSVSEAEKLRLYSIYGQFLDSKK 782
IT A+ SVS+AE LR Y Y Q + + +
Sbjct: 753 ITKEHFAEAMKTAKRSVSDAE-LRRYEAYSQQMKASR 788
Score = 195 bits (495), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/233 (42%), Positives = 143/233 (61%)
Query: 507 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 566
G+DD+GG I+EM+ELP + P +F ++ VL+YGPPG GKT + A A
Sbjct: 212 GYDDIGGCRKQMAQIREMVELPLRHPQLFKAIGIKPPRGVLMYGPPGTGKTLMARAVANE 271
Query: 567 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 626
F + GPE+++K G SE +R F +A AP ++F DE DSIAPKR N V
Sbjct: 272 TGAFFFLINGPEVMSKMAGESESNLRKAFEEAEKNAPAIIFIDEIDSIAPKRDKTNGEVE 331
Query: 627 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 686
RVV+Q LT +DG++ + V V AAT+RP+ +D AL R GR DR + P RL++L
Sbjct: 332 RRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEVL 391
Query: 687 KVISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEILNNIDSNE 739
++ ++ + LADDVDLEA+A T G+ GAD+ +L S+A + + E ++ ID +E
Sbjct: 392 RIHTKNMKLADDVDLEALAAETHGYVGADIASLCSEAAMQQIREKMDLIDLDE 444
>sp|Q54SY2|NVL_DICDI Putative ribosome biogenesis ATPase nvl OS=Dictyostelium discoideum
GN=nvl PE=3 SV=1
Length = 867
Score = 269 bits (688), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 190/591 (32%), Positives = 290/591 (49%), Gaps = 91/591 (15%)
Query: 255 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFIS 314
P IL+HGP G GKT LAKA+A L+ L A S +S E +R SN I+
Sbjct: 250 PRGILLHGPSGCGKTLLAKAIAGELKVP--LFAISATEITSGVSGESEARVRTLFSNAIA 307
Query: 315 EALDHAPSIVIFDNLDSII----SSSSDPE----------------------GSQPSTSV 348
+A P I+ D +D+I S+S D E ++P+
Sbjct: 308 QA----PCIIFIDEIDAIAPKRESASKDMERRIVSQLLTCMDSLNYLSSNNSTNEPNEQT 363
Query: 349 IALTKFLVDIMDEYGEKRKSSCGI-------------GPIAFVASAQSLEKIPQSLTSSG 395
+ DI++ + ++ G + + + E + +L G
Sbjct: 364 EQQQQQQQDIIEVDSQATTTTTASNNNNKQQKNDFKKGHVIVIGATNRPESLDTALRIGG 423
Query: 396 RFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLDVASKCDGYDAYDLEILVDRTVH 455
RFD + L P + R IL+ + LE + + ++A+ GY D+ +LV
Sbjct: 424 RFDKEICLGIPDQTARCKILKVITSKMRLENNFD-YEEIATLTPGYVGADINLLVKEAAT 482
Query: 456 AAVGRYLHSDSS---------------------------FEKHIKPTLVRD------DFS 482
+V R S+ + ++ ++P + DF
Sbjct: 483 NSVNRIFTSNLNGASSSSSSSSSSTTNINNIGLSTELLISKEPLEPEKLNSLYIEMIDFK 542
Query: 483 QAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRL 542
+A+ + +P A R+ T WDDVG L+ ++ + I P ++P + +
Sbjct: 543 KALKKVVPAAKREGFATIP---NVTWDDVGALSGVREELTNSILRPIRYPKKYKNMGIDS 599
Query: 543 RSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAA 602
+ VL+YGPPGCGKT + A A+ C FISVKGPELLNKY+G SE+AVR +F +A A++
Sbjct: 600 PAGVLMYGPPGCGKTLLAKAIASECQANFISVKGPELLNKYVGESERAVRQVFQRAAASS 659
Query: 603 PCLLFFDEFDSIAPKR---GHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLD 659
PC++FFDEFD++APKR T+RVVNQ LTE+DG+E + VF+ AAT+RPD++D
Sbjct: 660 PCVIFFDEFDALAPKRGGGDGGGNQATERVVNQLLTEMDGLEKRSEVFIIAATNRPDIID 719
Query: 660 AALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAH--MTEGFSGADLQ 717
AA+ RPGRLD++++ PSP ER +ILK ++ K+P+ DVDL + FSGADL
Sbjct: 720 AAMCRPGRLDKMVYVPLPSPEERCEILKTLTHKIPIHQDVDLIKVGTDLRCHSFSGADLS 779
Query: 718 ALLSDAQLSAVHEILNNIDSNEPGKMPVITDALLKSIASKARPSVSEAEKL 768
L+ +A A H I D+N V + + ++ SK +PSVS ++L
Sbjct: 780 LLVKEA---ANHAISRGFDNNSTEPDTVTMEDFIFAL-SKIKPSVSRKDEL 826
Score = 137 bits (345), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/332 (28%), Positives = 151/332 (45%), Gaps = 54/332 (16%)
Query: 507 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 566
+ ++GG+ I+E IE P P I++ + +LL+GP GCGKT + A A
Sbjct: 214 NFSNLGGVESCLRDIREHIEYPICHPEIYSHLGVEPPRGILLHGPSGCGKTLLAKAIAGE 273
Query: 567 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 626
+ ++ E+ + G SE VR +FS A A APC++F DE D+IAPKR + +
Sbjct: 274 LKVPLFAISATEITSGVSGESEARVRTLFSNAIAQAPCIIFIDEIDAIAPKRESASKDME 333
Query: 627 DRVVNQFLTELDGVEVLTG----------------------------------------- 645
R+V+Q LT +D + L+
Sbjct: 334 RRIVSQLLTCMDSLNYLSSNNSTNEPNEQTEQQQQQQQDIIEVDSQATTTTTASNNNNKQ 393
Query: 646 ---------VFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLA 696
V V AT+RP+ LD AL GR D+ + P R ILKVI+ K+ L
Sbjct: 394 QKNDFKKGHVIVIGATNRPESLDTALRIGGRFDKEICLGIPDQTARCKILKVITSKMRLE 453
Query: 697 DDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEI----LNNIDSNEPGKMPVITDALLK 752
++ D E IA +T G+ GAD+ L+ +A ++V+ I LN S+ T+
Sbjct: 454 NNFDYEEIATLTPGYVGADINLLVKEAATNSVNRIFTSNLNGASSSSSSSSSSTTNINNI 513
Query: 753 SIASKARPSVSEAEKLRLYSIYGQFLDSKKSV 784
++++ S E +L S+Y + +D KK++
Sbjct: 514 GLSTELLISKEPLEPEKLNSLYIEMIDFKKAL 545
>sp|P54609|CD48A_ARATH Cell division control protein 48 homolog A OS=Arabidopsis thaliana
GN=CDC48A PE=1 SV=1
Length = 809
Score = 267 bits (683), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 195/574 (33%), Positives = 285/574 (49%), Gaps = 60/574 (10%)
Query: 247 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCC------SRLSLE 300
F + + P IL++GPPGSGKT +A+AVA F C S+L+ E
Sbjct: 233 FKSIGVKPPKGILLYGPPGSGKTLIARAVANE--------TGAFFFCINGPEIMSKLAGE 284
Query: 301 KGPIIRQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMD 360
+R+A EA +APSI+ D +DSI G + L+ +MD
Sbjct: 285 SESNLRKAFE----EAEKNAPSIIFIDEIDSIAPKREKTNGEVERR----IVSQLLTLMD 336
Query: 361 EYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQ 420
G K ++ + + + I +L GRFD + + P R +L I
Sbjct: 337 --GLKSRAH-----VIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLR--IH 387
Query: 421 RRSLECSDEILLDVASK-CDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPT 475
++++ ++++ L+ SK GY DL L + + D S + I +
Sbjct: 388 TKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDDSIDAEILNS 447
Query: 476 L--VRDDFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPN 533
+ + F A+ P A+R+ T E W+D+GGL +++ ++E ++ P + P
Sbjct: 448 MAVTNEHFHTALGNSNPSALRE---TVVEVPNVSWNDIGGLENVKRELQETVQYPVEHPE 504
Query: 534 IFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRD 593
F + + VL YGPPGCGKT + A A C FISVKGPELL + G SE VR+
Sbjct: 505 KFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRE 564
Query: 594 IFSKATAAAPCLLFFDEFDSIAPKR----GHDNTGVTDRVVNQFLTELDGVEVLTGVFVF 649
IF KA +APC+LFFDE DSIA +R G D G DRV+NQ LTE+DG+ VF+
Sbjct: 565 IFDKARQSAPCVLFFDELDSIATQRGGGSGGDGGGAADRVLNQLLTEMDGMNAKKTVFII 624
Query: 650 AATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTE 709
AT+RPD++D+ALLRPGRLD+L++ P RL+I K RK P+A DVD+ A+A T+
Sbjct: 625 GATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKAALRKSPIAKDVDIGALAKYTQ 684
Query: 710 GFSGADLQALLSDAQLSAVHE-ILNNID-----SNEPGKMP--------VITDALLKSIA 755
GFSGAD+ + A A+ E I +I+ S P M I A +
Sbjct: 685 GFSGADITEICQRACKYAIRENIEKDIEKEKRRSENPEAMEEDGVDEVSEIKAAHFEESM 744
Query: 756 SKARPSVSEAEKLRLYSIYGQFLDSKKSVAAQSR 789
AR SVS+A+ +R Y + Q L + ++ R
Sbjct: 745 KYARRSVSDAD-IRKYQAFAQTLQQSRGFGSEFR 777
Score = 189 bits (481), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 97/230 (42%), Positives = 139/230 (60%)
Query: 507 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 566
G+DDVGG+ I+E++ELP + P +F ++ +LLYGPPG GKT I A A
Sbjct: 205 GYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANE 264
Query: 567 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 626
F + GPE+++K G SE +R F +A AP ++F DE DSIAPKR N V
Sbjct: 265 TGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVE 324
Query: 627 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 686
R+V+Q LT +DG++ V V AT+RP+ +D AL R GR DR + P RL++L
Sbjct: 325 RRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVL 384
Query: 687 KVISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEILNNID 736
++ ++ + LA+DVDLE I+ T G+ GADL AL ++A L + E ++ ID
Sbjct: 385 RIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVID 434
>sp|Q9P3A7|CDC48_SCHPO Cell division cycle protein 48 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=cdc48 PE=1 SV=2
Length = 815
Score = 266 bits (681), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 197/561 (35%), Positives = 289/561 (51%), Gaps = 50/561 (8%)
Query: 247 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 306
F + + P IL++GPPG+GKT +A+AVA L+ + S+++ E +R
Sbjct: 250 FKSIGIKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIM--SKMAGESESNLR 307
Query: 307 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 366
+A EA ++P+I+ D +DSI G V L+ +MD G K
Sbjct: 308 KAFE----EAEKNSPAIIFIDEIDSIAPKREKTNGEVERRVV----SQLLTLMD--GMKA 357
Query: 367 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 426
+S+ + +A+ I +L GRFD V + P + R IL I ++++
Sbjct: 358 RSN-----VVVMAATNRPNSIDPALRRFGRFDREVDVGIPDPTGRLEILR--IHTKNMKL 410
Query: 427 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLV------RD 479
+D++ L+ +A++ GY DL L + + E I ++ D
Sbjct: 411 ADDVDLEQIAAETHGYVGSDLASLCSEAAMQQIREKMDMIDLDEDEIDAEVLDSLGVTMD 470
Query: 480 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 539
+F A+ P A+R+ T E W+D+GGL +++ ++E +++P + F +
Sbjct: 471 NFRFALGSSNPSALRE---TVVEVPNVRWEDIGGLEEVKRELRETVQMPVMYAEKFLRFG 527
Query: 540 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 599
+ VL +GPPG GKT + A A CS FISVKGPELL+ + G SE VRDIF KA
Sbjct: 528 VTPSKGVLFFGPPGTGKTLLAKAIANECSANFISVKGPELLSMWFGESESNVRDIFDKAR 587
Query: 600 AAAPCLLFFDEFDSIAPKR--GHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDL 657
AAAPC++F DE DSIA R ++G DRVVNQ LTE+DGV VFV AT+RPD
Sbjct: 588 AAAPCVVFLDELDSIAKARGASAGDSGGGDRVVNQLLTEMDGVNSKKNVFVIGATNRPDQ 647
Query: 658 LDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGADLQ 717
+D AL+RPGRLD+L++ P R IL+ R P+A+DVDL A+A T GFSGADL+
Sbjct: 648 IDPALMRPGRLDQLIYVPLPDEEARFSILQTQLRHTPVAEDVDLRAVAKATHGFSGADLE 707
Query: 718 ALLSDA-QLSAVHEILNNID-SNEPGKMPVITDALLKSIAS--------------KARPS 761
++ A +L+ I +I NE G+ P D ++ AS AR S
Sbjct: 708 FVVQRAVKLAIKDSIEEDIKRENETGEAPA-DDVVMDEDASVSQVQRHHVEEAMKMARRS 766
Query: 762 VSEAEKLRLYSIYG-QFLDSK 781
VS+AE +R Y Y Q L S+
Sbjct: 767 VSDAE-VRRYEAYAHQLLTSR 786
Score = 195 bits (496), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 98/233 (42%), Positives = 143/233 (61%)
Query: 507 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 566
G+DD+GG I+E++ELP + P +F ++ +L+YGPPG GKT + A A
Sbjct: 222 GYDDIGGCRRQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVANE 281
Query: 567 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 626
F + GPE+++K G SE +R F +A +P ++F DE DSIAPKR N V
Sbjct: 282 TGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKTNGEVE 341
Query: 627 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 686
RVV+Q LT +DG++ + V V AAT+RP+ +D AL R GR DR + P P RL+IL
Sbjct: 342 RRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDVGIPDPTGRLEIL 401
Query: 687 KVISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEILNNIDSNE 739
++ ++ + LADDVDLE IA T G+ G+DL +L S+A + + E ++ ID +E
Sbjct: 402 RIHTKNMKLADDVDLEQIAAETHGYVGSDLASLCSEAAMQQIREKMDMIDLDE 454
>sp|Q8SSJ5|CDC48_ENCCU Cell division control protein 48 OS=Encephalitozoon cuniculi
(strain GB-M1) GN=CDC48 PE=1 SV=1
Length = 780
Score = 264 bits (674), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 177/541 (32%), Positives = 285/541 (52%), Gaps = 46/541 (8%)
Query: 247 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 306
+S + P IL++GPPG+GKT +A+A+A L+ + S+++ E +R
Sbjct: 234 YSKIGVKPPKGILLYGPPGTGKTLIARAIANETGAFLFLINGPEIM--SKMAGESESNLR 291
Query: 307 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 366
+A EA ++P+I+ D +D++ +G V L + +MD G K
Sbjct: 292 KAFE----EAEKNSPAIIFIDEIDALAPKREKSQGEVERRIVSQL----LTLMD--GMKA 341
Query: 367 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 426
+S+ + + + I +L GRFD +++ P + R IL I ++++
Sbjct: 342 RSN-----VIVLGATNRPNSIDPALRRYGRFDREIEIGVPDETGRLEILR--IHTKNMKM 394
Query: 427 SDEI-LLDVASKCDGYDAYDLEILVDRTVHAAVGRYL-HSDSSFEKHIKPTLVR-----D 479
S+++ L+ + + G+ DL L + L D EK L +
Sbjct: 395 SEDVDLVAINKELHGFTGSDLASLCSEAALQQIREKLPQIDLDSEKIDAKVLASLKVNSE 454
Query: 480 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 539
+F A+ P ++R+ T + W D+GGL ++ ++E ++ P ++P F +
Sbjct: 455 NFRYAIEHTDPSSLRE---TVIQSPNVKWSDIGGLEQVKQELRETVQYPVEYPEKFIKFG 511
Query: 540 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 599
+ VL YGPPGCGKT + A A C FIS+KGPELL+ ++G SE +RD+F++A
Sbjct: 512 MTPAKGVLFYGPPGCGKTLLAKAVATECKANFISIKGPELLSMWVGESESNIRDLFARAR 571
Query: 600 AAAPCLLFFDEFDSIAPKR-GHD-NTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDL 657
AAPC+LFFDE DSIA R G+D ++G TDR++NQ L+E+DG+ VFV AT+RPD
Sbjct: 572 GAAPCVLFFDEIDSIAKARSGNDGSSGATDRMLNQLLSEMDGINQKKNVFVIGATNRPDQ 631
Query: 658 LDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGADLQ 717
LD+AL+RPGRLD+L++ P R+ IL+ +K PL+ ++DL +A T+ FSGADL
Sbjct: 632 LDSALMRPGRLDQLVYIPLPDLDSRVSILQATLKKTPLSPEIDLRQLAEATDKFSGADLS 691
Query: 718 ALLSDAQLSAVHEILNN-----------IDSNEPGKMPVIT-DALLKSIASKARPSVSEA 765
+ A A+ E + +D +P +P + D L++S+ + AR SVSE
Sbjct: 692 EICQRACKLAIRETIEYELEQKKKGSEMMDLEDP--VPYLRPDHLVQSLKT-ARRSVSEK 748
Query: 766 E 766
E
Sbjct: 749 E 749
Score = 176 bits (446), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 89/230 (38%), Positives = 136/230 (59%)
Query: 507 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 566
G+DDVGG I+E++ELP + ++++ ++ +LLYGPPG GKT I A A
Sbjct: 206 GYDDVGGCRAQMAKIRELVELPLRHSQLYSKIGVKPPKGILLYGPPGTGKTLIARAIANE 265
Query: 567 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 626
+ GPE+++K G SE +R F +A +P ++F DE D++APKR V
Sbjct: 266 TGAFLFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDALAPKREKSQGEVE 325
Query: 627 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 686
R+V+Q LT +DG++ + V V AT+RP+ +D AL R GR DR + P RL+IL
Sbjct: 326 RRIVSQLLTLMDGMKARSNVIVLGATNRPNSIDPALRRYGRFDREIEIGVPDETGRLEIL 385
Query: 687 KVISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEILNNID 736
++ ++ + +++DVDL AI GF+G+DL +L S+A L + E L ID
Sbjct: 386 RIHTKNMKMSEDVDLVAINKELHGFTGSDLASLCSEAALQQIREKLPQID 435
>sp|Q9SS94|CD48C_ARATH Cell division control protein 48 homolog C OS=Arabidopsis thaliana
GN=CDC48C PE=2 SV=2
Length = 820
Score = 261 bits (667), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 186/528 (35%), Positives = 261/528 (49%), Gaps = 36/528 (6%)
Query: 232 INRIKVLLSPDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVF 291
+N + +L+P+ F + P IL HGPPG GKT LA A+A A + F
Sbjct: 247 MNVLFPILNPEP---FKKIGVKPPSGILFHGPPGCGKTKLANAIANE--------AGVPF 295
Query: 292 VCCSRLSLEKG--PIIRQALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVI 349
S + G + + S+A APSIV D +D+I S E Q
Sbjct: 296 YKISATEVISGVSGASEENIRELFSKAYRTAPSIVFIDEIDAI---GSKRENQQREMEKR 352
Query: 350 ALTKFL--VDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPA 407
+T+ L +D G+K G + + + + + +L SGRF+ + L AP
Sbjct: 353 IVTQLLTCMDGPGNKGDKNAPDSSAGFVLVIGATNRPDALDPALRRSGRFETEIALTAPD 412
Query: 408 ASERKAILEHEIQRRSLECSDEILLDVASKCDGYDAYDLEILVDRTVHAAVGRYL---HS 464
R IL Q+ LE + +A G+ DLE + A+ R L S
Sbjct: 413 EDARAEILSVVAQKLRLEGPFD-KKRIARLTPGFVGADLESVAYLAGRKAIKRILDSRKS 471
Query: 465 DSSFEKHIKPTLVRDDFSQAMHEFLPVAMRD----ITKTSAEGGRSG--------WDDVG 512
+ S + + +R + + E L V M D + A R G WDDVG
Sbjct: 472 EQSGDGEDDKSWLRMPWPEEELEKLFVKMSDFEEAVNLVQASLTREGFSIVPDVKWDDVG 531
Query: 513 GLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFI 572
GL ++ I P K P+I+ + L + LLYGPPGCGKT I AAA F+
Sbjct: 532 GLDHLRLQFNRYIVRPIKKPDIYKAFGVDLETGFLLYGPPGCGKTLIAKAAANEAGANFM 591
Query: 573 SVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQ 632
+KG ELLNKY+G SE A+R +F +A APC++FFDE D++ RG + V +R++NQ
Sbjct: 592 HIKGAELLNKYVGESELAIRTLFQRARTCAPCVIFFDEVDALTTSRGKEGAWVVERLLNQ 651
Query: 633 FLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRK 692
FL ELDG E V+V AT+RPD++D A LRPGR LL+ P+ ER ILK I+RK
Sbjct: 652 FLVELDGGE-RRNVYVIGATNRPDVVDPAFLRPGRFGNLLYVPLPNADERASILKAIARK 710
Query: 693 LPLADDVDLEAIA-HMTEGFSGADLQALLSDAQLSAVHEILNNIDSNE 739
P+ VDL+ IA + EGFSGADL L+ A AV E++ + +S+E
Sbjct: 711 KPIDPSVDLDGIAKNNCEGFSGADLAHLVQKATFQAVEEMIGSSESSE 758
Score = 144 bits (362), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/244 (34%), Positives = 130/244 (53%), Gaps = 10/244 (4%)
Query: 508 WDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAAC 567
+ D GG+ I + ++ + P P F + ++ S +L +GPPGCGKT + A A
Sbjct: 232 FKDFGGIKKILDELEMNVLFPILNPEPFKKIGVKPPSGILFHGPPGCGKTKLANAIANEA 291
Query: 568 SLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTD 627
+ F + E+++ GASE+ +R++FSKA AP ++F DE D+I KR + +
Sbjct: 292 GVPFYKISATEVISGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIGSKRENQQREMEK 351
Query: 628 RVVNQFLTELDG---------VEVLTG-VFVFAATSRPDLLDAALLRPGRLDRLLFCDFP 677
R+V Q LT +DG + G V V AT+RPD LD AL R GR + + P
Sbjct: 352 RIVTQLLTCMDGPGNKGDKNAPDSSAGFVLVIGATNRPDALDPALRRSGRFETEIALTAP 411
Query: 678 SPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEILNNIDS 737
R +IL V+++KL L D + IA +T GF GADL+++ A A+ IL++ S
Sbjct: 412 DEDARAEILSVVAQKLRLEGPFDKKRIARLTPGFVGADLESVAYLAGRKAIKRILDSRKS 471
Query: 738 NEPG 741
+ G
Sbjct: 472 EQSG 475
>sp|O15381|NVL_HUMAN Nuclear valosin-containing protein-like OS=Homo sapiens GN=NVL PE=1
SV=1
Length = 856
Score = 260 bits (664), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 192/617 (31%), Positives = 296/617 (47%), Gaps = 68/617 (11%)
Query: 204 TVKERGSTQGFDSNVSSLSWMGTTASDVINR--IKVLLSPDSGLWFSTYHLPLPGHILIH 261
++++ +G + +S++ + +D+ + K+L+ + + P +L+H
Sbjct: 245 VLQKKAKARGLEFQISNVKFEDVGGNDMTLKEVCKMLIHMRHPEVYHHLGVVPPRGVLLH 304
Query: 262 GPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISEALDHAP 321
GPPG GKT LA A+A L+ VA V S +S E Q L +A+ +AP
Sbjct: 305 GPPGCGKTLLAHAIAGELDLPILKVAAPEIV--SGVSGES----EQKLRELFEQAVSNAP 358
Query: 322 SIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGIGPIAFVASA 381
I+ D +D+I V L + D+ + R + + +
Sbjct: 359 CIIFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATAR--------VLVIGAT 410
Query: 382 QSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLDVASKCDGY 441
+ + +L +GRFD + L P + R+ IL+ ++ L + + +A G+
Sbjct: 411 NRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLCRKLRLPQAFD-FCHLAHLTPGF 469
Query: 442 DAYDLEILVDRTVHAAVGRYLHSDSSFEKH------------------IKPT-------- 475
DL L AV R L +K +PT
Sbjct: 470 VGADLMALCREAAMCAVNRVLMKLQEQQKKNPEMEDLPSKGVQEERLGTEPTSETQDELQ 529
Query: 476 ----LVRDD--FSQAMHEFLPVAMRD----ITKTSAEGGRSG--------WDDVGGLTDI 517
L+RD S+ + L + + D ++ R G W D+G L DI
Sbjct: 530 RLLGLLRDQDPLSEEQMQGLCIELNDFIVALSSVQPSAKREGFVTVPNVTWADIGALEDI 589
Query: 518 QNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGP 577
+ + I P + P+ F L + VLL GPPGCGKT + A A L FISVKGP
Sbjct: 590 REELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGP 649
Query: 578 ELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTEL 637
ELLN Y+G SE+AVR +F +A +APC++FFDE D++ P+R TG + RVVNQ LTE+
Sbjct: 650 ELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGASVRVVNQLLTEM 709
Query: 638 DGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISR---KLP 694
DG+E VF+ AAT+RPD++D A+LRPGRLD+ LF P P +RL ILK I++ K P
Sbjct: 710 DGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPP 769
Query: 695 LADDVDLEAIAH--MTEGFSGADLQALLSDAQLSAV-HEILNNIDSNEPGKMPVITDALL 751
L DV+LEAIA + ++GADL AL+ +A + A+ E+ NE G++ V +
Sbjct: 770 LDADVNLEAIAGDLRCDCYTGADLSALVREASICALRQEMARQKSGNEKGELKV-SHKHF 828
Query: 752 KSIASKARPSVSEAEKL 768
+ K R S+S+ +++
Sbjct: 829 EEAFKKVRSSISKKDQI 845
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 114/268 (42%), Gaps = 45/268 (16%)
Query: 200 VSFYTVKERGSTQGFDSNVSSLSWMGTTASDVINR---IKVLLSPDSGLWFSTYHLPLPG 256
V+ +V+ +GF V +++W A + I + +L + F L P
Sbjct: 558 VALSSVQPSAKREGF-VTVPNVTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPA 616
Query: 257 HILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII--------RQA 308
+L+ GPPG GKT LAKAVA + + F+ KGP + +A
Sbjct: 617 GVLLAGPPGCGKTLLAKAVANE--------SGLNFISV------KGPELLNMYVGESERA 662
Query: 309 LSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKS 368
+ A + AP ++ FD +D++ SD E SV + + L + MD +++
Sbjct: 663 VRQVFQRAKNSAPCVIFFDEVDALCPRRSDRET---GASVRVVNQLLTE-MDGLEARQQ- 717
Query: 369 SCGIGPIAFVASAQSLEKIPQSLTSSGRFD--FHVQLPAPAASERKAILEHEIQRRSLEC 426
+ +A+ + I ++ GR D V LP PA +R AIL+ + +
Sbjct: 718 ------VFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPA--DRLAILKTITKNGTKPP 769
Query: 427 SD-EILLDVAS---KCDGYDAYDLEILV 450
D ++ L+ + +CD Y DL LV
Sbjct: 770 LDADVNLEAIAGDLRCDCYTGADLSALV 797
>sp|P54811|TERA1_CAEEL Transitional endoplasmic reticulum ATPase homolog 1
OS=Caenorhabditis elegans GN=cdc-48.1 PE=1 SV=1
Length = 809
Score = 258 bits (659), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 183/565 (32%), Positives = 281/565 (49%), Gaps = 52/565 (9%)
Query: 247 FSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIR 306
F + P IL+ GPPG+GKT +A+AVA L+ + S++S E +R
Sbjct: 236 FKAIGIKPPRGILLFGPPGTGKTLIARAVANETGSFFFLINGPEVM--SKMSGESESNLR 293
Query: 307 QALSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 366
+A E + P+I+ D +D+I G V L + +MD G K
Sbjct: 294 KAFE----ECEKNQPAILFIDEIDAIAPKREKTNGEVERRIVSQL----LTLMD--GVKG 343
Query: 367 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 426
+S+ + +A+ I +L GRFD + + P A R IL I ++++
Sbjct: 344 RSN-----LVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEILR--IHTKNMKL 396
Query: 427 SDEILLD-VASKCDGYDAYDLEILVDRTVHAAVGRYLH----SDSSFEKHIKPTL--VRD 479
+D++ L+ +A++C G+ DL L + + D + + +L +
Sbjct: 397 ADDVDLEQIANECHGFVGADLASLCSEAALQQIREKMELIDLEDDQIDAEVLNSLAVTME 456
Query: 480 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 539
+F A + P A+R+ E + W D+GGL +++ ++E+++ P + P + +
Sbjct: 457 NFRFAQGKSSPSALREAV---VETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFG 513
Query: 540 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 599
++ VL YGPPGCGKT + A A C FIS+KGPELL + G SE VRD+F KA
Sbjct: 514 MQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKAR 573
Query: 600 AAAPCLLFFDEFDSI----APKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRP 655
AAAPC+LFFDE DSI G D G +DRV+NQ LTE+DG+ VF+ AT+RP
Sbjct: 574 AAAPCVLFFDELDSIAKARGGGAGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRP 633
Query: 656 DLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGAD 715
D++D A+LRPGRLD+L++ P R ILK RK PL+ D+DL +A T GFSGAD
Sbjct: 634 DIIDPAVLRPGRLDQLIYIPLPDEASRHQILKASLRKTPLSKDLDLTFLAKNTVGFSGAD 693
Query: 716 LQALLSDAQLSAVHEILNN------------------IDSNEPGKMPVITDALLKSIASK 757
L + A A+ E + ++ + +P IT A +
Sbjct: 694 LTEICQRACKLAIRESIEKEIRIEKERQDRQARGEELMEDDAVDPVPEITRAHFEEAMKF 753
Query: 758 ARPSVSEAEKLRLYSIYGQFLDSKK 782
AR SV++ + +R Y ++ Q L +
Sbjct: 754 ARRSVTDND-IRKYEMFAQTLQQSR 777
Score = 187 bits (475), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 99/230 (43%), Positives = 138/230 (60%)
Query: 507 GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 566
G+DD+GG+ IKEM+ELP + P +F ++ +LL+GPPG GKT I A A
Sbjct: 208 GYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIARAVANE 267
Query: 567 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 626
F + GPE+++K G SE +R F + P +LF DE D+IAPKR N V
Sbjct: 268 TGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAIAPKREKTNGEVE 327
Query: 627 DRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDIL 686
R+V+Q LT +DGV+ + + V AAT+RP+ +D AL R GR DR + P RL+IL
Sbjct: 328 RRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEIL 387
Query: 687 KVISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEILNNID 736
++ ++ + LADDVDLE IA+ GF GADL +L S+A L + E + ID
Sbjct: 388 RIHTKNMKLADDVDLEQIANECHGFVGADLASLCSEAALQQIREKMELID 437
>sp|Q9DBY8|NVL_MOUSE Nuclear valosin-containing protein-like OS=Mus musculus GN=Nvl PE=1
SV=1
Length = 855
Score = 256 bits (654), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 181/525 (34%), Positives = 259/525 (49%), Gaps = 64/525 (12%)
Query: 255 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFIS 314
P +L+HGPPG GKT LA A+A L+ VA V S +S E Q L
Sbjct: 297 PRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIV--SGVSGES----EQKLRELFD 350
Query: 315 EALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGIGP 374
+A+ +AP IV D +D+I V L + D+ + R
Sbjct: 351 QAVSNAPCIVFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATAR-------- 402
Query: 375 IAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLDV 434
+ + + + + +L +GRFD V L P + R+ IL+ ++ L + +
Sbjct: 403 VLVIGATNRPDSLDPALRRAGRFDREVCLGIPDEAARERILQTLCRKLRLPETFN-FCHL 461
Query: 435 ASKCDGYDAYDLEILVDRTVHAAVGRYLH----------------SDSSFEKHI--KPT- 475
A G+ DL L AV R L S+ E+ + +PT
Sbjct: 462 AHLTPGFVGADLMALCREAAMCAVNRVLMKQQAQQKKKPEIEGLPSEGDQEERLGAEPTS 521
Query: 476 -----------LVRDD--FSQAMHEFLPVAMRDITKTSAE----GGRSG--------WDD 510
L+RD S+ + L + + D AE R G W D
Sbjct: 522 ETQDELQRLLGLLRDQDPLSEEQMQGLCIELNDFIVALAEVQPSAKREGFVTVPNVTWAD 581
Query: 511 VGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLR 570
+G L DI++ + I P + P+ F L + +LL GPPGCGKT + A A L
Sbjct: 582 IGALEDIRDELIMAILAPVRNPDQFRTLGLGTPAGILLAGPPGCGKTLLAKAVANESGLN 641
Query: 571 FISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVV 630
FISVKGPELLN Y+G SE+AVR +F +A +APC++FFDE D++ P+R TG + RVV
Sbjct: 642 FISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGASVRVV 701
Query: 631 NQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVIS 690
NQ LTE+DG+E VF+ AAT+RPD++D A+LRPGRLD+ LF P P +R+ ILK I+
Sbjct: 702 NQLLTEMDGLETRQQVFILAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRVAILKTIT 761
Query: 691 R---KLPLADDVDLEAIAH--MTEGFSGADLQALLSDAQLSAVHE 730
+ K PL +DV+LE IA+ ++GADL AL+ +A L A+ +
Sbjct: 762 KNGTKPPLDEDVNLETIANDLRCNCYTGADLTALVREASLCALRQ 806
Score = 155 bits (393), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 129/229 (56%), Gaps = 6/229 (2%)
Query: 508 WDDVGGL-TDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAA 566
++DVGG ++ K +I + + P ++ + VLL+GPPGCGKT + A A
Sbjct: 263 FEDVGGNDATLKEVCKMLIHM--RHPEVYQHLGVVPPRGVLLHGPPGCGKTLLAHAIAGE 320
Query: 567 CSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVT 626
L + V PE+++ G SEQ +R++F +A + APC++F DE D+I PKR + +
Sbjct: 321 LDLPILKVAAPEIVSGVSGESEQKLRELFDQAVSNAPCIVFIDEIDAITPKREVASKDME 380
Query: 627 DRVVNQFLT---ELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERL 683
R+V Q LT +L+ V V V AT+RPD LD AL R GR DR + P R
Sbjct: 381 RRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREVCLGIPDEAARE 440
Query: 684 DILKVISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEIL 732
IL+ + RKL L + + +AH+T GF GADL AL +A + AV+ +L
Sbjct: 441 RILQTLCRKLRLPETFNFCHLAHLTPGFVGADLMALCREAAMCAVNRVL 489
Score = 59.7 bits (143), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 134/323 (41%), Gaps = 63/323 (19%)
Query: 200 VSFYTVKERGSTQGFDSNVSSLSWMGTTASDVINR--IKVLLSP-DSGLWFSTYHLPLPG 256
V+ V+ +GF V +++W A + I I +L+P + F T L P
Sbjct: 557 VALAEVQPSAKREGF-VTVPNVTWADIGALEDIRDELIMAILAPVRNPDQFRTLGLGTPA 615
Query: 257 HILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII--------RQA 308
IL+ GPPG GKT LAKAVA + + F+ KGP + +A
Sbjct: 616 GILLAGPPGCGKTLLAKAVANE--------SGLNFISV------KGPELLNMYVGESERA 661
Query: 309 LSNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKS 368
+ A + AP ++ FD +D++ SD E SV + + L + MD +++
Sbjct: 662 VRQVFQRAKNSAPCVIFFDEVDALCPRRSDRET---GASVRVVNQLLTE-MDGLETRQQ- 716
Query: 369 SCGIGPIAFVASAQSLEKIPQSLTSSGRFD--FHVQLPAPAASERKAILEHEIQRRSLEC 426
+ +A+ + I ++ GR D V LP PA +R AIL+ + +
Sbjct: 717 ------VFILAATNRPDIIDPAILRPGRLDKTLFVGLPPPA--DRVAILKTITKNGTKPP 768
Query: 427 SDE-ILLDVAS---KCDGYDAYDLEILVDRTVHAAV-------------GRYLHSDSSFE 469
DE + L+ + +C+ Y DL LV A+ G S FE
Sbjct: 769 LDEDVNLETIANDLRCNCYTGADLTALVREASLCALRQEITAQKNGVGAGELKVSHKHFE 828
Query: 470 ---KHIKPTLVRDDFSQAMHEFL 489
K +KP++ D Q M+E L
Sbjct: 829 DAFKKVKPSISIKD--QVMYEAL 849
>sp|O14325|YB7A_SCHPO Uncharacterized AAA domain-containing protein C16E9.10c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC16E9.10c PE=1 SV=1
Length = 779
Score = 256 bits (654), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 178/583 (30%), Positives = 290/583 (49%), Gaps = 80/583 (13%)
Query: 255 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPI--IRQALSNF 312
P +L+HGPPG GKT LA A+A L + F+ S S+ G + +
Sbjct: 208 PRGVLLHGPPGCGKTMLANALANEL--------GVPFISISAPSIVSGMSGESEKKVREV 259
Query: 313 ISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGI 372
EA AP ++ D +D++ E +Q + +FL MDE ++
Sbjct: 260 FEEAKSLAPCLMFIDEIDAVTPKR---ESAQREMERRIVAQFLT-CMDELSFEKTDG--- 312
Query: 373 GPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEI-L 431
P+ + + + + +L +GRFD + L P+ R+ IL + L+ S +
Sbjct: 313 KPVLVIGATNRPDSLDSALRRAGRFDREICLTVPSQDAREKILR--TMAKGLKLSGDFDF 370
Query: 432 LDVASKCDGYDAYDLE--------ILVDRTVH---------------------------- 455
+A + GY DL+ I + R +
Sbjct: 371 RQLAKQTPGYVGADLKALTAAAGIIAIKRIFNEISPLNKLDLNSDPRFNELDSDMALDSN 430
Query: 456 --------AAVGRYL--HSDSSFEKHIKP-TLVRDDFSQAMHEFLPVAMRDITKTSAEGG 504
+ + RYL H D + ++P + DF +A+ + P + R+ T G
Sbjct: 431 DSLPLDHSSIIQRYLNAHPDPLSPEELEPLAICPQDFIEALAKVQPSSKREGFATVP--G 488
Query: 505 RSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAA 564
S W+++G L I+ ++ I P K P ++ + + VLL+GPPGCGKT + A A
Sbjct: 489 VS-WNNIGALKSIRVELQMAIVQPIKRPELYQSVGISAPTGVLLWGPPGCGKTLLAKAVA 547
Query: 565 AACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTG 624
FIS++GPELLNKY+G SE+AVR +F +A A++PC++FFDE D++ P+R +
Sbjct: 548 NESKANFISIRGPELLNKYVGESERAVRQVFLRARASSPCVIFFDELDAMVPRRDDSLSE 607
Query: 625 VTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLD 684
+ RVVN LTELDG+ +GV+V AAT+RPD++D A+LRPGRLD+ L D P ER++
Sbjct: 608 ASSRVVNTLLTELDGLSDRSGVYVIAATNRPDIIDPAMLRPGRLDKTLLVDLPDAHERVE 667
Query: 685 ILKVISRKLPLADDVDLEAIAH--MTEGFSGADLQALLSDAQLSAVHE-ILNNIDSNEP- 740
ILK ++++ PL ++V+L+ + FSGADL AL+ +A ++A+ + +I SNEP
Sbjct: 668 ILKTLTKQTPLHEEVNLDVLGRDERCSNFSGADLAALVREAAVTALRSAVFADIASNEPE 727
Query: 741 -----GKMPV-ITDALLKSIASKARPSVSEAEKLRLYSIYGQF 777
P+ +T+A + +PSVS+ ++ + + ++
Sbjct: 728 ITQHSALEPIRVTNADFELAFKNIKPSVSDRDRQKYQRLAKRW 770
Score = 176 bits (446), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 93/230 (40%), Positives = 134/230 (58%), Gaps = 4/230 (1%)
Query: 510 DVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSL 569
D+GGL D N + E++ +P K P ++ + VLL+GPPGCGKT + A A +
Sbjct: 175 DIGGLDDCINELLELVAMPIKHPEVYQYTGIHPPRGVLLHGPPGCGKTMLANALANELGV 234
Query: 570 RFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRV 629
FIS+ P +++ G SE+ VR++F +A + APCL+F DE D++ PKR + R+
Sbjct: 235 PFISISAPSIVSGMSGESEKKVREVFEEAKSLAPCLMFIDEIDAVTPKRESAQREMERRI 294
Query: 630 VNQFLTELDGV--EVLTG--VFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDI 685
V QFLT +D + E G V V AT+RPD LD+AL R GR DR + PS R I
Sbjct: 295 VAQFLTCMDELSFEKTDGKPVLVIGATNRPDSLDSALRRAGRFDREICLTVPSQDAREKI 354
Query: 686 LKVISRKLPLADDVDLEAIAHMTEGFSGADLQALLSDAQLSAVHEILNNI 735
L+ +++ L L+ D D +A T G+ GADL+AL + A + A+ I N I
Sbjct: 355 LRTMAKGLKLSGDFDFRQLAKQTPGYVGADLKALTAAAGIIAIKRIFNEI 404
Score = 53.1 bits (126), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 128/313 (40%), Gaps = 35/313 (11%)
Query: 201 SFYTVKERGSTQGFDSNVSSLSW--MGTTASDVINRIKVLLSP-DSGLWFSTYHLPLPGH 257
+ V+ +GF + V +SW +G S + ++ P + + + P
Sbjct: 470 ALAKVQPSSKREGF-ATVPGVSWNNIGALKSIRVELQMAIVQPIKRPELYQSVGISAPTG 528
Query: 258 ILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISEAL 317
+L+ GPPG GKT LAKAVA E + ++ ++ E +RQ F+ A
Sbjct: 529 VLLWGPPGCGKTLLAKAVAN--ESKANFISIRGPELLNKYVGESERAVRQV---FL-RAR 582
Query: 318 DHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGIGPIAF 377
+P ++ FD LD+++ D S V L L + D G +
Sbjct: 583 ASSPCVIFFDELDAMVPRRDDSLSEASSRVVNTLLTELDGLSDRSG-----------VYV 631
Query: 378 VASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLDVA-- 435
+A+ + I ++ GR D + + P A ER IL+ ++ L +E+ LDV
Sbjct: 632 IAATNRPDIIDPAMLRPGRLDKTLLVDLPDAHERVEILKTLTKQTPLH--EEVNLDVLGR 689
Query: 436 -SKCDGYDAYDLEILVDRTVHAAVGRYLHSD-SSFEKHI------KPTLVRD-DFSQAMH 486
+C + DL LV A+ + +D +S E I +P V + DF A
Sbjct: 690 DERCSNFSGADLAALVREAAVTALRSAVFADIASNEPEITQHSALEPIRVTNADFELAFK 749
Query: 487 EFLP-VAMRDITK 498
P V+ RD K
Sbjct: 750 NIKPSVSDRDRQK 762
>sp|Q13608|PEX6_HUMAN Peroxisome assembly factor 2 OS=Homo sapiens GN=PEX6 PE=1 SV=2
Length = 980
Score = 253 bits (646), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 202/582 (34%), Positives = 299/582 (51%), Gaps = 58/582 (9%)
Query: 219 SSLSWMGTTA--SDVINRIKVLLSPDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVA 276
SSLS G A S++ +K L P L T +L+ GPPG GKT++ VA
Sbjct: 431 SSLSPPGLEALVSELCAVLKPRLQPGGALLTGT------SSVLLRGPPGCGKTTV---VA 481
Query: 277 KSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISEALDHAPSIVIFDNLDSIISSS 336
+ H L H++ V CS L E + L S A P++++ +D +
Sbjct: 482 AACSH---LGLHLLKVPCSSLCAESSGAVETKLQAIFSRARRCRPAVLLLTAVDLL---G 535
Query: 337 SDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGR 396
D +G V+A+ + L+ E +SC P+ VA+ + +P + ++
Sbjct: 536 RDRDGLGEDARVMAVLRHLL-----LNEDPLNSCP--PLMVVATTSRAQDLPADVQTA-- 586
Query: 397 FDFHVQLPAPAASERKAILEHEIQRRSLECSDEI-LLDVASKCDGYDAYDLEILVDRTVH 455
F +++PA + +R +IL L E+ L +A +C G+ DL L+ +
Sbjct: 587 FPHELEVPALSEGQRLSILRALTAH--LPLGQEVNLAQLARRCAGFVVGDLYALLTHSSR 644
Query: 456 AAVGRYLHS---------DSSFEKHIKPTLVRDDFSQAMHEFLPVAMRDITKTSAEGGRS 506
AA R +S D L+ +DF QA+ + + A G
Sbjct: 645 AACTRIKNSGLAGGLTEEDEGELCAAGFPLLAEDFGQALEQL------QTAHSQAVGAPK 698
Query: 507 ----GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGA 562
W DVGGL +++ I E I+LP + P + + RS +LL+GPPG GKT + A
Sbjct: 699 IPSVSWHDVGGLQEVKKEILETIQLPLEHPELLSLG--LRRSGLLLHGPPGTGKTLLAKA 756
Query: 563 AAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGH-- 620
A CSL F+SVKGPEL+N Y+G SE+ VR++F++A AAAPC++FFDE DS+AP RG
Sbjct: 757 VATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRSG 816
Query: 621 DNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPR 680
D+ GV DRVV+Q L ELDG+ VFV AT+RPDLLD ALLRPGR D+L+F R
Sbjct: 817 DSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGANEDR 876
Query: 681 -ERLDILKVISRKLPLADDVDL-EAIAHMTEGFSGADLQALLSDAQLSAVHEILNNIDSN 738
+L +L I+RK L V L + +GADL +L SDA +A+ +++++
Sbjct: 877 ASQLRVLSAITRKFKLEPSVSLVNVLDCCPPQLTGADLYSLCSDAMTAALKRRVHDLEEG 936
Query: 739 -EPGK--MPVITDALLKSIASKARPSVSEAEKLRLYSIYGQF 777
EPG + + + LL++ A++ +PSVSE E LR I +F
Sbjct: 937 LEPGSSALMLTMEDLLQA-AARLQPSVSEQELLRYKRIQRKF 977
>sp|Q99LC9|PEX6_MOUSE Peroxisome assembly factor 2 OS=Mus musculus GN=Pex6 PE=2 SV=1
Length = 981
Score = 249 bits (636), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 187/544 (34%), Positives = 280/544 (51%), Gaps = 56/544 (10%)
Query: 258 ILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISEAL 317
+L+ GPPGSGKT+ A L H++ V CS L + + L S A
Sbjct: 467 VLLQGPPGSGKTTAVTAACSRLG------LHLLKVPCSSLCADSSRAVETKLQATFSRAR 520
Query: 318 DHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGIGPIAF 377
P++++ +D + D +G V A + L ++DE R P+
Sbjct: 521 RCRPAVLLLTAVDLL---GRDRDGLGEDARVAATLRHL--LLDEDALSR-----CPPLMV 570
Query: 378 VASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEI-LLDVAS 436
VA+ ++ +P + ++ F +++P + ++R +IL+ L E+ L +A
Sbjct: 571 VATTSRVQDLPTDVQTA--FPHELEVPVLSEAQRLSILQALTAH--LPLGQEVNLPQLAR 626
Query: 437 KCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKP---------TLVRDDFSQAMHE 487
+C G+ DL L+ T AA R S S+ + L+ +DF QA+ +
Sbjct: 627 RCAGFVVGDLYALLTHTCRAACTRIRASGSAGGLSEEDEGDLCVAGFPLLAEDFGQALDQ 686
Query: 488 FLPVAMRDITKTSAEGGRS----GWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLR 543
+ A G W DVGGL D++ I E I+LP + P + + R
Sbjct: 687 L------QTAHSQAVGAPRIPSVSWHDVGGLQDVKKEILETIQLPLEHPELLSLG--LRR 738
Query: 544 SNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAP 603
S +LL+GPPG GKT + A A CSL F+SVKGPEL+N Y+G SE+ VR++F++A AAAP
Sbjct: 739 SGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAP 798
Query: 604 CLLFFDEFDSIAPKRGH--DNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAA 661
C++FFDE DS+AP RG D+ GV DRVV+Q L ELDG+ VFV AT+RPDLLD A
Sbjct: 799 CIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPA 858
Query: 662 LLRPGRLDRLLFCDFPSPR-ERLDILKVISRKLPLADDVDLEAIAHMTEG-FSGADLQAL 719
LLRPGR D+L+F R +L +L I+RK L V L + +GADL +L
Sbjct: 859 LLRPGRFDKLVFVGASEDRASQLRVLSAITRKFKLEASVSLANVLDCCPPQLTGADLYSL 918
Query: 720 LSDAQLSAVHEILNNIDSNEPGKMPVITDALLKSI------ASKARPSVSEAEKLRLYSI 773
SDA ++A+ + +++ + + + ALL ++ A++ +PSVSE E LR I
Sbjct: 919 CSDAMMTALKRRVRDLEEG----LELRSSALLLTMEDLLQAAARLQPSVSEQELLRYKRI 974
Query: 774 YGQF 777
+F
Sbjct: 975 QRKF 978
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 83/193 (43%), Gaps = 11/193 (5%)
Query: 544 SNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAP 603
S VLL GPPG GKT V AA + L + V L A E ++ FS+A P
Sbjct: 465 SCVLLQGPPGSGKTTAVTAACSRLGLHLLKVPCSSLCADSSRAVETKLQATFSRARRCRP 524
Query: 604 CLLFFDEFDSIAPKRGHDNTGVTDRV---VNQFLTELDGVEVLTGVFVFAATSRPDLL-- 658
+L D + R D G RV + L + D + + V A TSR L
Sbjct: 525 AVLLLTAVDLLG--RDRDGLGEDARVAATLRHLLLDEDALSRCPPLMVVATTSRVQDLPT 582
Query: 659 DAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHMTEGFSGADLQA 718
D P L+ + S +RL IL+ ++ LPL +V+L +A GF DL A
Sbjct: 583 DVQTAFPHELEVPVL----SEAQRLSILQALTAHLPLGQEVNLPQLARRCAGFVVGDLYA 638
Query: 719 LLSDAQLSAVHEI 731
LL+ +A I
Sbjct: 639 LLTHTCRAACTRI 651
>sp|Q8RY16|PEX6_ARATH Peroxisome biogenesis protein 6 OS=Arabidopsis thaliana GN=PEX6
PE=1 SV=1
Length = 941
Score = 249 bits (635), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 195/564 (34%), Positives = 288/564 (51%), Gaps = 64/564 (11%)
Query: 230 DVINRIKVLLSPDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHI 289
+ +N + +LSP L S L +L+HG PG GK ++ K VA+ L H+
Sbjct: 354 ETVNILASVLSPP--LCPSALASKLRVAVLLHGIPGCGKRTVVKYVARRLG------LHV 405
Query: 290 VFVCCSRLSLEKGPIIRQALSNFISEALDHAPSIV------IFDNLDSIISSSSDPEG-S 342
V C L AL+ + A ++P+I+ +F NL S S D G S
Sbjct: 406 VEFSCHSLLASSERKTSTALAQTFNMARRYSPTILLLRHFDVFKNLGSQDGSLGDRVGVS 465
Query: 343 QPSTSVI-ALTKFLVD---IMDEYGEKRKSSCGIGP-----IAFVASAQSLEKIPQSLTS 393
SVI LT+ + + M+E S +G + +ASA+S E I ++
Sbjct: 466 FEIASVIRELTEPVSNGDSSMEEKSNSNFSENEVGKFRGHQVLLIASAESTEGISPTIRR 525
Query: 394 SGRFDFHVQLPAPAASERKAILEHEIQRRSL---ECSDEILLDVASKCDGYDAYDLEILV 450
F +++ + +R +L +Q S SDE + + + G+ DL+ LV
Sbjct: 526 C--FSHEIRMGSLNDEQRSEMLSQSLQGVSQFLNISSDEFMKGLVGQTSGFLPRDLQALV 583
Query: 451 -DRTVHAAV-----------------GRYLHSDSSFEKHIKPTLVRDDFSQAMHEFLPVA 492
D + + G +H S + + ++DF++A+
Sbjct: 584 ADAGANLYISQESETKKINSLSDDLHGVDIHQASQIDNSTEKLTAKEDFTKALDR---SK 640
Query: 493 MRDITKTSA-EGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGP 551
R+ + A + WDDVGGL D++ +I + ++LP ++F+ LR RS VLLYGP
Sbjct: 641 KRNASALGAPKVPNVKWDDVGGLEDVKTSILDTVQLPLLHKDLFSSG-LRKRSGVLLYGP 699
Query: 552 PGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEF 611
PG GKT + A A CSL F+SVKGPEL+N YIG SE+ VRDIF KA +A PC++FFDE
Sbjct: 700 PGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFEKARSARPCVIFFDEL 759
Query: 612 DSIAPKRGH--DNTGVTDRVVNQFLTELDGV-EVLTGVFVFAATSRPDLLDAALLRPGRL 668
DS+AP RG D+ GV DRVV+Q L E+DG+ + +F+ A++RPDL+D ALLRPGR
Sbjct: 760 DSLAPARGASGDSGGVMDRVVSQMLAEIDGLSDSSQDLFIIGASNRPDLIDPALLRPGRF 819
Query: 669 DRLLFCDF---PSPRERLDILKVISRKLPLADDVDLEAIAHMTEG-FSGADLQALLSDAQ 724
D+LL+ S RER +LK ++RK L++DV L ++A F+GAD+ AL +DA
Sbjct: 820 DKLLYVGVNADASYRER--VLKALTRKFKLSEDVSLYSVAKKCPSTFTGADMYALCADAW 877
Query: 725 LSAVHEILNNIDSNEPGKMPVITD 748
A ++ DS G MP D
Sbjct: 878 FQAAKRKVSKSDS---GDMPTEED 898
>sp|Q6FW67|PEX6_CANGA Peroxisomal biogenesis factor 6 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=PEX6 PE=3 SV=1
Length = 1017
Score = 246 bits (627), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 156/442 (35%), Positives = 241/442 (54%), Gaps = 50/442 (11%)
Query: 322 SIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGIGP-IAFVAS 380
+I++ ++D I+ + Q S V AL L+ + Y I P + F +
Sbjct: 531 TIILIKHIDHILKKVDQNQDIQQSRQVKALEGDLISFIKSYSR-------IYPGVVFAFT 583
Query: 381 AQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEI-----------QRRSLECSDE 429
+ S++ +P+ S +FD+ V P +R++I++ + ++ ++CS+E
Sbjct: 584 SASIDNLPEGFRSEIKFDYVVH--PPNEKQRRSIIDELLSTSDLFQKYGNRKLRIQCSNE 641
Query: 430 ILLDVAS-KCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPTL---------VRD 479
I + S G YD++ ++ V ++ + + + IK + VR
Sbjct: 642 IEISTLSLHSAGLSPYDIQYIISLAVADSLRKCNNYLLWRQNKIKVDMISIQNALEKVRS 701
Query: 480 DFSQAMHEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAP 539
D+S ++ ++ ++T WDDVGGL+ +++AI E I+LP K P +F
Sbjct: 702 DYSASIGA---PSIPNVT----------WDDVGGLSSVKDAIMETIDLPLKHPELFGSG- 747
Query: 540 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAT 599
L+ RS +L YGPPG GKT + A A SL F SVKGPELLN YIG SE VR +F KA
Sbjct: 748 LKKRSGILFYGPPGTGKTLLAKAIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQKAR 807
Query: 600 AAAPCLLFFDEFDSIAPKRGH--DNTGVTDRVVNQFLTELDGVEVL-TGVFVFAATSRPD 656
A PC++FFDE DS+APKRG+ D+ GV DR+V+Q L ELDG+ GVF+ AT+RPD
Sbjct: 808 DAKPCVIFFDEVDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSSDGDGVFIIGATNRPD 867
Query: 657 LLDAALLRPGRLDRLLFCDFPSPRER-LDILKVISRKLPLADDVDL-EAIAHMTEGFSGA 714
LLD ALLRPGR D+L++ RE+ +I++ ++RK ++ D++ E ++ ++GA
Sbjct: 868 LLDEALLRPGRFDKLIYLGIADTREKQANIMRALTRKFKVSSDINFDELVSDFPFSYTGA 927
Query: 715 DLQALLSDAQLSAVHEILNNID 736
D AL SDA L A+ I ID
Sbjct: 928 DFYALCSDAMLKAMTRISKEID 949
>sp|Q9HG03|PEX6_PENCH Peroxisomal biogenesis factor 6 OS=Penicillium chrysogenum GN=pex6
PE=3 SV=1
Length = 1459
Score = 246 bits (627), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 163/411 (39%), Positives = 227/411 (55%), Gaps = 40/411 (9%)
Query: 378 VASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEI-LLDVAS 436
+A+ +E IP+ + S +F ++ AP ER+ IL++ + R + S ++ L +A
Sbjct: 886 IATTTDVETIPEGIRSLITHEF--EMGAPEEKEREGILQNAVTERGIRLSADVDLGSIAL 943
Query: 437 KCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHIKPT--LVRDDFSQAMHEFLPVAMR 494
K A DL +V+R A R L S + K I + VRD R
Sbjct: 944 KTAALVAGDLVDVVERAAGARTAR-LESLAEASKKISGSEVFVRDVLLAGGD-----GAR 997
Query: 495 DITKT----SAEGGRS--------------GWDDVGGLTDIQNAIKEMIELPSKFPNIFA 536
+TK + E R GWDDVGGLT++++A+ E I+LP + P +FA
Sbjct: 998 GVTKADFDAAVEAARKNFADSIGAPKIPNVGWDDVGGLTNVKDALVETIQLPLERPELFA 1057
Query: 537 QAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFS 596
+ ++ RS +L YGPPG GKT + A A SL F SVKGPELLN YIG SE VR +F
Sbjct: 1058 KG-MKKRSGILFYGPPGTGKTLLAKAIATEFSLNFFSVKGPELLNMYIGESEANVRRVFQ 1116
Query: 597 KATAAAPCLLFFDEFDSIAPKRGH--DNTGVTDRVVNQFLTELDGV----EVLTGVFVFA 650
+A A PC++FFDE DS+APKRG+ D+ GV DR+V+Q L ELDG+ E GVFV
Sbjct: 1117 RARDARPCVVFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMNGGEENSGGVFVIG 1176
Query: 651 ATSRPDLLDAALLRPGRLDRLLFCDFP-SPRERLDILKVISRKLPLADDVDLEAIA-HMT 708
AT+RPDLLD ALLRPGR D++L+ + R++ IL+ ++RK L DV L+ +A +
Sbjct: 1177 ATNRPDLLDTALLRPGRFDKMLYLGVSDTHRKQATILEALTRKFALHPDVSLDRVAEQLP 1236
Query: 709 EGFSGADLQALLSDAQLSAVHEILNNIDS--NEPGKMPVITDALLKSIASK 757
++GADL AL SDA L A+ +D N PV T +A+K
Sbjct: 1237 LTYTGADLYALCSDAMLKAITRKATAVDEKINALPNGPVSTAWFFDHLATK 1287
Score = 41.6 bits (96), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 85/215 (39%), Gaps = 34/215 (15%)
Query: 258 ILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFISE-- 315
IL +GPPG+GKT LAKA+A + F KGP + L+ +I E
Sbjct: 1066 ILFYGPPGTGKTLLAKAIATEFS--------LNFFSV------KGP---ELLNMYIGESE 1108
Query: 316 ---------ALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKR 366
A D P +V FD LDS+ + +G +++ L ++ G +
Sbjct: 1109 ANVRRVFQRARDARPCVVFFDELDSVAPKRGN-QGDSGGVMDRIVSQLLAELDGMNGGEE 1167
Query: 367 KSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLEC 426
S G + + + + + +L GRFD + L ++A + + R+
Sbjct: 1168 NS----GGVFVIGATNRPDLLDTALLRPGRFDKMLYLGVSDTHRKQATILEALTRKFALH 1223
Query: 427 SDEILLDVASKCD-GYDAYDLEILVDRTVHAAVGR 460
D L VA + Y DL L + A+ R
Sbjct: 1224 PDVSLDRVAEQLPLTYTGADLYALCSDAMLKAITR 1258
>sp|O13764|PEX6_SCHPO Peroxisomal ATPase pex6 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=pex6 PE=3 SV=1
Length = 948
Score = 246 bits (627), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 182/557 (32%), Positives = 277/557 (49%), Gaps = 60/557 (10%)
Query: 254 LPGH---ILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCS-RLSLEKGPIIRQAL 309
+PG L+HG P +GKT K++E L + VF S + + L
Sbjct: 418 VPGFNPFFLLHGNPFTGKT-------KAVEEVASLFSAPVFTISSYEFADATADHLEAKL 470
Query: 310 SNFISEALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSS 369
F+ + +I+ +LD ++S SSD P + I + +D++
Sbjct: 471 DMFVQNVVKSPCAIIFVKDLD-VLSISSDEGNIVPGSKSIQILLSKIDLVKSPQ------ 523
Query: 370 CGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDE 429
G + + S+EKIP + S F+ ++ ER +L+ I ++
Sbjct: 524 ---GRYIVIGTCHSIEKIPYEILSESFFE--LKFSELEMDERLELLK--IYANNVIIDKR 576
Query: 430 I-LLDVASKCDGYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHI--KPTLVRDDFSQAMH 486
I L DVA K + +LE L D AAV R + + I P + D +++
Sbjct: 577 ISLKDVALKTNSMSFGELECLPDHMTKAAVDRIKRTGYDNDSIILSGPIITEQDVDVSIN 636
Query: 487 EFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNV 546
++ + T + WDD+GGL + + +++ ++LP +FP +F+Q L+ RS V
Sbjct: 637 RI----RKEKSNTIFTVPKVNWDDIGGLEEAKTVLRDTLQLPLQFPELFSQG-LKPRSGV 691
Query: 547 LLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLL 606
LLYGPPG GKT + A A SL F+S+KGPELLN Y+G SE VR++F KA ++PC++
Sbjct: 692 LLYGPPGTGKTLLAKAVATELSLEFVSIKGPELLNMYVGESEANVRNVFEKARNSSPCVI 751
Query: 607 FFDEFDSIAPKRGH--DNTGVTDRVVNQFLTELDGVEVLTG--VFVFAATSRPDLLDAAL 662
FFDE DSIAP RG+ D+ V DRVV+Q L ELD + VFV AT+RPDLLD +L
Sbjct: 752 FFDELDSIAPHRGNSSDSGNVMDRVVSQLLAELDSISKDNNKYVFVIGATNRPDLLDPSL 811
Query: 663 LRPGRLDRLLFCDFPSPRE-RLDILKVISRKLPLADDVDLEAIA-HMTEGFSGADLQALL 720
LRPGR D+L++ E + +L+ +++ L + +DL IA + F+GAD+ AL
Sbjct: 812 LRPGRFDKLVYLGINKSEESKASMLRALTKTFKLDETIDLNEIAKNCHPNFTGADMYALC 871
Query: 721 SDAQLSAVHEILNNID--------------------SNEPGKMPVITDALLKSIASKARP 760
SDA LSA+ N ID + + ++ + + L S+ K RP
Sbjct: 872 SDAVLSAIKRKTNEIDLLIQASGTDLSTEEFFKRNENQDSLELRITKEDFLTSL-KKLRP 930
Query: 761 SVSEAEKLRLYSIYGQF 777
S+SE E R + QF
Sbjct: 931 SISEQELHRYEMVRHQF 947
>sp|Q07844|RIX7_YEAST Ribosome biogenesis ATPase RIX7 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RIX7 PE=1 SV=1
Length = 837
Score = 243 bits (621), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 192/665 (28%), Positives = 313/665 (47%), Gaps = 119/665 (17%)
Query: 215 DSNVSSLSWMGTTASDVINRIKV-LLSPDSGLWFSTYHLPLPGHILIHGPPGSGKTSLAK 273
+S++ SL M + ++ I + +L P+ ++ ST P P +L+HGPPG GKTS+A
Sbjct: 201 NSSLKSLGGMDDVVAQLMELIGLPILHPE--IFLSTGVEP-PRGVLLHGPPGCGKTSIAN 257
Query: 274 AVAKSLEHHKDLVAHIVFVCCSRLSLEKGPI--IRQALSNFISEALDHAPSIVIFDNLDS 331
A+A L+ + F+ S S+ G + + + EA AP +V FD +D+
Sbjct: 258 ALAGELQ--------VPFISISAPSVVSGMSGESEKKIRDLFDEARSLAPCLVFFDEIDA 309
Query: 332 IISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGIGPIAFVASAQSLEKIPQSL 391
I + ++A L+ MDE ++ + P+ + + + + +L
Sbjct: 310 ITPKRDGGAQREMERRIVAQ---LLTSMDELTMEKTNG---KPVIIIGATNRPDSLDAAL 363
Query: 392 TSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLD-------VASKCDGYDAY 444
+GRFD + L P R IL+ + SD + +D +A G+
Sbjct: 364 RRAGRFDREICLNVPNEVSRLHILK--------KMSDNLKIDGAIDFAKLAKLTPGFVGA 415
Query: 445 DLEILVDRTVHAAVGRYLHSDSSFEKHIKPTLVRDDFSQAMH------------------ 486
DL+ LV A+ R + ++ + PT D M
Sbjct: 416 DLKALVTAAGTCAIKRIFQTYANIKST--PTTATDSSEDNMEIDETANGDESSLKNTANM 473
Query: 487 -EFLPV-------------------------------AMRDITKTSAEGGRSGWDDV--- 511
+ LP+ A+ I T+ G + DV
Sbjct: 474 IDPLPLSVVQQFIRNYPEPLSGEQLSLLSIKYEDFLKALPTIQPTAKREGFATVPDVTWA 533
Query: 512 --GGLTDIQNAIKEMIELPSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSL 569
G L ++ + I P K P ++ + + VLL+GPPGCGKT + A A
Sbjct: 534 NVGALQRVRLELNMAIVQPIKRPELYEKVGISAPGGVLLWGPPGCGKTLLAKAVANESRA 593
Query: 570 RFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRV 629
FIS+KGPELLNKY+G SE+++R +F++A A+ PC++FFDE D++ P+R + + RV
Sbjct: 594 NFISIKGPELLNKYVGESERSIRQVFTRARASVPCVIFFDELDALVPRRDTSLSESSSRV 653
Query: 630 VNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVI 689
VN LTELDG+ G+FV AT+RPD++D A+LRPGRLD+ LF + P+ E+LDI+K +
Sbjct: 654 VNTLLTELDGLNDRRGIFVIGATNRPDMIDPAMLRPGRLDKSLFIELPNTEEKLDIIKTL 713
Query: 690 SRK--LPLADDVDLEAIAHMTE--GFSGADLQALLSDAQLSA----------VHEILNNI 735
++ PL+ DVD E I + FSGADL AL+ ++ + A + +L+N
Sbjct: 714 TKSHGTPLSSDVDFEEIIRNEKCNNFSGADLAALVRESSVLALKRKFFQSEEIQSVLDND 773
Query: 736 DSNE--------PGKMPVITDALLKSIASKARPSVSEAEKLRLYSIYGQFLDSKKSVAAQ 787
E G+ ++T + +S K +PSVS+ ++L+ Y + L+ K + +
Sbjct: 774 LDKEFEDLSVGVSGEEIIVTMSDFRSALRKIKPSVSDKDRLK----YDR-LNKKMGLTEE 828
Query: 788 SRDAK 792
+DA+
Sbjct: 829 MKDAE 833
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 116/275 (42%), Gaps = 37/275 (13%)
Query: 204 TVKERGSTQGFDSNVSSLSWMGTTASDVINRIKVLLS---------PDSGLWFSTYHLPL 254
T++ +GF + V ++W A + R+++ L+ P+ + +
Sbjct: 514 TIQPTAKREGF-ATVPDVTWANVGA---LQRVRLELNMAIVQPIKRPE---LYEKVGISA 566
Query: 255 PGHILIHGPPGSGKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPIIRQALSNFIS 314
PG +L+ GPPG GKT LAKAVA E + ++ ++ E IRQ +
Sbjct: 567 PGGVLLWGPPGCGKTLLAKAVAN--ESRANFISIKGPELLNKYVGESERSIRQVFTR--- 621
Query: 315 EALDHAPSIVIFDNLDSIISSSSDPEGSQPSTSVIALTKFLVDIMDEYGEKRKSSCGIGP 374
A P ++ FD LD+++ D S+ S+ V+ L+ +D ++R
Sbjct: 622 -ARASVPCVIFFDELDALV-PRRDTSLSESSSRVV---NTLLTELDGLNDRRG------- 669
Query: 375 IAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILEHEIQRRSLECSDEILLD- 433
I + + + I ++ GR D + + P E+ I++ + S ++ +
Sbjct: 670 IFVIGATNRPDMIDPAMLRPGRLDKSLFIELPNTEEKLDIIKTLTKSHGTPLSSDVDFEE 729
Query: 434 --VASKCDGYDAYDLEILV-DRTVHAAVGRYLHSD 465
KC+ + DL LV + +V A ++ S+
Sbjct: 730 IIRNEKCNNFSGADLAALVRESSVLALKRKFFQSE 764
>sp|P33760|PEX6_YEAST Peroxisomal ATPase PEX6 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PEX6 PE=1 SV=1
Length = 1030
Score = 243 bits (620), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 173/509 (33%), Positives = 267/509 (52%), Gaps = 51/509 (10%)
Query: 252 LPLPGHILIHGPPGS-GKTSLAKAVAKSLEHHKDLVAHIVFVCCSRLSLEKGPII---RQ 307
+ L +L+H + GK ++ + +K L H + + SR II R
Sbjct: 472 ITLNASVLLHSTTNNVGKATMVRFASKYLGIHLLEIDCLSLTSNSRQLDSTSKIIGYIRA 531
Query: 308 ALSNFISEALDHAPSIVIFDNLDSI---ISSSSDPEGSQPSTSV-IALTKFLVDIMDEYG 363
N + A +P+++ +LDSI ++++ DPE + S+ ++K L D++
Sbjct: 532 KCENVLPYA---SPAVIFLAHLDSILLDVNANQDPEAIKLQKSINFEMSKLL----DDFT 584
Query: 364 EKRKSSCGIGPIAFVASAQSLEKIPQSLTSSGRFDFHVQLPAPAASERKAILE-----HE 418
K + FV S +++ +P S S RF+ + +P P+ ++R I + HE
Sbjct: 585 FKFPGT------TFVGSVNNIDNVPSSFRSHMRFE--ILVPVPSEAQRLRIFQWYLSSHE 636
Query: 419 I-----QRRSLECSDEILLDVASKCD-GYDAYDLEILVDRTVHAAVGRYLHSDSSFEKHI 472
+ Q+ + D I S G D++ +V+ A R+
Sbjct: 637 LNRDVQQKVPVSYMDNISFSSLSSYSAGLTPLDIKSIVETARMTATARFYQESKKCGWLP 696
Query: 473 KPTLV-RDDFSQAM----HEFLPVAMRDITKTSAEGGRSGWDDVGGLTDIQNAIKEMIEL 527
+ L+ ++D S+A +EF ++ + + WDD+GG+ ++ I + I++
Sbjct: 697 QSILITQEDLSKATSKARNEF------SVSIGAPQIPNVTWDDIGGIDFVKGEILDTIDM 750
Query: 528 PSKFPNIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGAS 587
P K P +F ++ RS +L YGPPG GKT + A A SL F SVKGPELLN YIG S
Sbjct: 751 PLKHPELFTSG-MKKRSGILFYGPPGTGKTLMAKAIATNFSLNFFSVKGPELLNMYIGES 809
Query: 588 EQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGH--DNTGVTDRVVNQFLTELDGVEV-LT 644
E VR +F KA A PC++FFDE DS+APKRG+ D+ GV DR+V+Q L ELDG+
Sbjct: 810 EANVRRVFQKAREAKPCVIFFDEIDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSTDAD 869
Query: 645 GVFVFAATSRPDLLDAALLRPGRLDRLLFCDFP-SPRERLDILKVISRKLPLADDVDLEA 703
GVFV AT+RPDLLD ALLRPGR D+LL+ P + ++L+IL+ ++RK L +DV L
Sbjct: 870 GVFVIGATNRPDLLDEALLRPGRFDKLLYLGIPDTDTKQLNILEALTRKFVLDNDVKLIE 929
Query: 704 IAHMTE-GFSGADLQALLSDAQLSAVHEI 731
+A + ++GAD AL SDA L+A+ I
Sbjct: 930 LAKLCPFNYTGADFYALCSDAMLNAMSRI 958
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 288,327,791
Number of Sequences: 539616
Number of extensions: 12268984
Number of successful extensions: 51967
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1177
Number of HSP's successfully gapped in prelim test: 890
Number of HSP's that attempted gapping in prelim test: 46731
Number of HSP's gapped (non-prelim): 4391
length of query: 799
length of database: 191,569,459
effective HSP length: 126
effective length of query: 673
effective length of database: 123,577,843
effective search space: 83167888339
effective search space used: 83167888339
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)